Query psy2947
Match_columns 441
No_of_seqs 509 out of 4783
Neff 10.0
Searched_HMMs 29240
Date Fri Aug 16 21:39:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2947.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2947hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lmt_A Calmodulin-related prot 99.9 4.5E-22 1.6E-26 165.4 14.4 144 259-436 3-148 (148)
2 2lhi_A Calmodulin, serine/thre 99.9 8.4E-22 2.9E-26 168.5 13.5 144 258-436 3-148 (176)
3 1ogq_A PGIP-2, polygalacturona 99.9 4.4E-23 1.5E-27 193.7 5.1 153 4-164 2-186 (313)
4 3i5g_C Myosin catalytic light 99.9 1.7E-21 5.7E-26 163.7 13.5 147 259-440 2-157 (159)
5 3u0k_A Rcamp; fluorescent prot 99.9 2.5E-21 8.6E-26 181.4 16.0 144 259-436 295-440 (440)
6 2obh_A Centrin-2; DNA repair c 99.9 4.7E-21 1.6E-25 158.3 12.6 125 309-434 18-142 (143)
7 1y1x_A Leishmania major homolo 99.8 6.6E-20 2.3E-24 159.2 19.7 155 265-434 26-188 (191)
8 4fcg_A Uncharacterized protein 99.8 6.3E-23 2.2E-27 193.8 -0.4 200 4-217 23-239 (328)
9 3i5g_B Myosin regulatory light 99.8 9.2E-21 3.2E-25 158.1 12.4 141 258-437 8-150 (153)
10 1exr_A Calmodulin; high resolu 99.8 1.9E-20 6.6E-25 155.5 13.9 126 309-435 22-147 (148)
11 2d8n_A Recoverin; structural g 99.8 1.3E-19 4.4E-24 159.4 18.4 155 277-435 12-185 (207)
12 2znd_A Programmed cell death p 99.8 1.3E-19 4.6E-24 154.4 17.5 159 263-436 4-171 (172)
13 3fwb_A Cell division control p 99.8 1.4E-19 4.6E-24 152.4 15.8 144 258-435 15-160 (161)
14 2bl0_C Myosin regulatory light 99.8 1.6E-19 5.4E-24 148.7 15.1 125 308-434 17-141 (142)
15 3sjs_A URE3-BP sequence specif 99.8 1.3E-19 4.4E-24 160.9 15.2 163 257-435 42-217 (220)
16 3qrx_A Centrin; calcium-bindin 99.8 1.7E-19 6E-24 153.1 15.0 127 309-436 40-166 (169)
17 2jnf_A Troponin C; stretch act 99.8 2E-19 6.9E-24 150.9 14.7 143 260-436 7-156 (158)
18 4ds7_A Calmodulin, CAM; protei 99.8 3.1E-19 1.1E-23 147.7 15.3 126 308-435 22-147 (147)
19 3ox6_A Calcium-binding protein 99.8 4.2E-19 1.4E-23 147.9 15.7 127 308-435 22-153 (153)
20 1ij5_A Plasmodial specific LAV 99.8 9.9E-20 3.4E-24 170.7 12.8 169 258-437 114-320 (323)
21 2l2e_A Calcium-binding protein 99.8 1.8E-18 6E-23 149.9 19.7 154 279-436 6-176 (190)
22 1nya_A Calerythrin; EF-hand, m 99.8 6.9E-19 2.4E-23 150.3 16.9 152 261-437 2-166 (176)
23 1m45_A MLC1P, myosin light cha 99.8 1.8E-19 6.1E-24 149.5 12.7 130 306-436 13-148 (148)
24 2f2o_A Calmodulin fused with c 99.8 4.1E-19 1.4E-23 152.3 14.2 143 260-436 5-149 (179)
25 2be4_A Hypothetical protein LO 99.8 5.8E-19 2E-23 162.0 15.7 176 259-436 4-269 (272)
26 1dtl_A Cardiac troponin C; hel 99.8 4.9E-19 1.7E-23 149.0 13.7 124 311-435 33-159 (161)
27 1wdc_C Scallop myosin; calcium 99.8 4.5E-19 1.5E-23 148.5 13.2 126 309-436 23-151 (156)
28 4ecn_A Leucine-rich repeat pro 99.8 1.2E-20 4.1E-25 198.2 4.1 136 73-220 440-608 (876)
29 1alv_A Calpain, S-camld; calci 99.8 1.3E-18 4.3E-23 148.5 16.0 152 264-433 2-167 (173)
30 2mys_C Myosin; muscle protein, 99.8 1.8E-18 6E-23 143.5 16.2 124 309-435 20-148 (149)
31 2bl0_B Myosin regulatory light 99.8 9.7E-19 3.3E-23 144.4 14.1 127 308-438 16-143 (145)
32 2i7a_A Calpain 13; calcium-dep 99.8 2E-18 6.9E-23 146.9 16.3 143 276-434 16-172 (174)
33 1s6c_A KV4 potassium channel-i 99.8 1.9E-18 6.5E-23 148.8 16.3 127 309-436 31-169 (183)
34 2ovk_C Myosin catalytic light 99.8 5.9E-19 2E-23 148.3 12.5 142 260-436 3-152 (159)
35 2v9t_B SLIT homolog 2 protein 99.8 3.2E-19 1.1E-23 158.4 11.3 164 37-234 3-179 (220)
36 1s1e_A KV channel interacting 99.8 2.9E-18 9.8E-23 152.6 17.0 150 283-435 35-201 (224)
37 1wdc_B Scallop myosin; calcium 99.8 2.4E-18 8.2E-23 144.1 15.5 143 257-438 9-153 (156)
38 2v70_A SLIT-2, SLIT homolog 2 99.8 9.3E-19 3.2E-23 155.4 13.7 166 37-235 3-181 (220)
39 3j04_B Myosin regulatory light 99.8 6.5E-19 2.2E-23 145.2 11.8 138 261-436 2-141 (143)
40 1fpw_A Yeast frequenin, calciu 99.8 6.6E-18 2.3E-22 146.2 17.8 151 283-436 9-176 (190)
41 2znd_A Programmed cell death p 99.8 2.9E-18 9.8E-23 146.1 15.2 120 308-434 18-137 (172)
42 1top_A Troponin C; contractIle 99.8 1.5E-18 5.1E-23 146.1 13.1 125 310-435 33-160 (162)
43 3pm8_A PFCDPK2, calcium-depend 99.8 3.6E-19 1.2E-23 155.2 9.5 127 308-436 68-196 (197)
44 2f33_A Calbindin; EF-hand, Ca2 99.8 1.9E-18 6.6E-23 157.7 14.7 175 259-434 9-218 (263)
45 1y1x_A Leishmania major homolo 99.8 3.1E-18 1.1E-22 148.6 15.2 131 284-434 26-156 (191)
46 1qv0_A Obelin, OBL; photoprote 99.8 2.2E-18 7.4E-23 149.9 14.3 148 259-435 13-177 (195)
47 2mys_B Myosin; muscle protein, 99.8 4.7E-18 1.6E-22 143.8 15.9 140 259-436 18-160 (166)
48 2ccm_A Calexcitin; EF hand, ca 99.8 2.2E-18 7.4E-23 149.5 14.0 152 259-435 5-171 (191)
49 2ehb_A Calcineurin B-like prot 99.8 4.7E-18 1.6E-22 149.4 16.2 155 278-435 14-183 (207)
50 3sjs_A URE3-BP sequence specif 99.8 3.7E-18 1.3E-22 151.4 15.0 121 305-434 59-179 (220)
51 3ll8_B Calcineurin subunit B t 99.8 4.2E-18 1.4E-22 142.2 14.4 123 308-435 17-144 (155)
52 1juo_A Sorcin; calcium-binding 99.8 7.9E-18 2.7E-22 146.9 16.4 156 260-433 27-195 (198)
53 3k21_A PFCDPK3, calcium-depend 99.8 7.2E-18 2.5E-22 146.2 15.9 123 308-434 63-190 (191)
54 2hpk_A Photoprotein berovin; s 99.8 1.6E-18 5.5E-23 152.5 11.9 150 258-436 28-191 (208)
55 4eco_A Uncharacterized protein 99.8 2.4E-20 8.3E-25 191.8 0.2 157 73-243 198-388 (636)
56 3m19_A Variable lymphocyte rec 99.8 1.7E-18 5.8E-23 157.1 12.1 174 38-222 3-194 (251)
57 1w7j_B Myosin light chain 1; m 99.8 4.8E-19 1.6E-23 147.4 7.6 141 260-435 4-150 (151)
58 2f33_A Calbindin; EF-hand, Ca2 99.8 2.4E-18 8.2E-23 157.1 12.9 170 266-436 58-261 (263)
59 3mse_B Calcium-dependent prote 99.8 6.2E-18 2.1E-22 145.2 14.4 122 308-436 50-179 (180)
60 2wfh_A SLIT homolog 2 protein 99.8 2.6E-18 9E-23 149.1 12.2 137 37-174 2-148 (193)
61 1uhk_A Aequorin 2, aequorin; E 99.8 4.1E-18 1.4E-22 147.6 13.4 146 261-435 11-173 (191)
62 3dtp_E RLC, myosin regulatory 99.8 6.2E-18 2.1E-22 147.3 14.6 142 257-437 48-191 (196)
63 1g8i_A Frequenin, neuronal cal 99.8 6.9E-18 2.4E-22 146.1 14.7 127 308-435 36-175 (190)
64 2i7a_A Calpain 13; calcium-dep 99.8 4.3E-18 1.5E-22 144.9 13.0 119 308-435 15-142 (174)
65 3sg6_A Gcamp2, myosin light ch 99.8 1E-17 3.5E-22 161.1 17.0 127 308-435 323-449 (450)
66 2bec_A Calcineurin B homologou 99.8 5.6E-18 1.9E-22 148.3 13.6 100 336-435 63-183 (202)
67 3akb_A Putative calcium bindin 99.8 7.7E-18 2.6E-22 142.3 13.9 148 265-437 3-162 (166)
68 3khe_A Calmodulin-like domain 99.8 3.9E-18 1.3E-22 147.8 12.3 126 308-436 51-186 (191)
69 1k94_A Grancalcin; penta-EF-ha 99.8 2.4E-17 8.1E-22 139.4 16.7 146 271-434 4-160 (165)
70 1gjy_A Sorcin, CP-22, V19; cal 99.8 2.8E-17 9.7E-22 139.2 17.1 145 271-432 6-163 (167)
71 2ovk_B RLC, myosin regulatory 99.8 4.2E-18 1.4E-22 142.0 11.6 141 258-437 8-150 (153)
72 1jba_A GCAP-2, protein (guanyl 99.8 1.4E-17 4.9E-22 145.9 15.5 126 308-435 33-176 (204)
73 2jul_A Calsenilin; EF-hand, ca 99.8 1.9E-17 6.5E-22 150.5 16.8 149 284-435 76-241 (256)
74 1bjf_A Neurocalcin delta; calc 99.8 1.8E-17 6.2E-22 143.9 15.9 150 283-435 9-175 (193)
75 3dd4_A KV channel-interacting 99.8 8.3E-18 2.8E-22 150.2 13.7 126 309-435 77-214 (229)
76 1k94_A Grancalcin; penta-EF-ha 99.7 3.8E-17 1.3E-21 138.1 16.8 124 302-434 4-131 (165)
77 1ggw_A Protein (CDC4P); light 99.7 1.1E-17 3.6E-22 137.3 12.8 89 346-435 49-139 (140)
78 2r2i_A Guanylyl cyclase-activa 99.7 1.7E-17 5.8E-22 144.8 14.7 129 306-435 23-159 (198)
79 1alv_A Calpain, S-camld; calci 99.7 2E-17 6.8E-22 141.0 14.6 123 303-434 10-139 (173)
80 4fcg_A Uncharacterized protein 99.7 1.3E-18 4.6E-23 164.1 8.0 179 60-250 103-295 (328)
81 2sas_A Sarcoplasmic calcium-bi 99.7 3.8E-18 1.3E-22 146.9 10.2 151 261-436 3-168 (185)
82 1gjy_A Sorcin, CP-22, V19; cal 99.7 4E-17 1.4E-21 138.3 16.2 124 302-434 6-133 (167)
83 2xot_A Amphoterin-induced prot 99.7 5.2E-18 1.8E-22 162.3 12.0 179 36-222 9-204 (361)
84 1s6i_A CDPK, calcium-dependent 99.7 2E-18 6.7E-23 149.4 7.6 139 260-435 4-144 (188)
85 2zfd_A Calcineurin B-like prot 99.7 4.8E-17 1.6E-21 145.0 16.6 129 305-435 56-194 (226)
86 3rgz_A Protein brassinosteroid 99.7 2.5E-19 8.4E-24 188.4 1.9 208 3-220 7-260 (768)
87 1q80_A SCP, sarcoplasmic calci 99.7 1.1E-17 3.9E-22 142.5 11.4 144 262-435 2-156 (174)
88 1ozn_A Reticulon 4 receptor; N 99.7 8.1E-18 2.8E-22 155.6 11.3 173 38-220 1-190 (285)
89 1w8a_A SLIT protein; signaling 99.7 4.1E-17 1.4E-21 141.6 14.9 109 38-163 1-113 (192)
90 3e3r_A Calcyphosin, calcyphosi 99.7 1.8E-17 6.3E-22 145.2 12.6 125 308-434 48-180 (204)
91 1dgu_A Calcium-saturated CIB; 99.7 1.9E-17 6.4E-22 142.5 12.4 100 337-436 63-172 (183)
92 2o6s_A Variable lymphocyte rec 99.7 5.3E-17 1.8E-21 142.8 15.5 124 39-164 1-136 (208)
93 2qac_A Myosin A tail domain in 99.7 1.6E-16 5.4E-21 131.3 16.7 124 304-434 21-145 (146)
94 1juo_A Sorcin; calcium-binding 99.7 1.2E-16 4.2E-21 139.3 16.7 123 303-434 38-164 (198)
95 1p9a_G Platelet glycoprotein I 99.7 3E-17 1E-21 152.0 13.2 165 59-234 53-222 (290)
96 2ggz_A Guanylyl cyclase-activa 99.7 4.2E-17 1.4E-21 143.8 13.3 129 267-397 20-161 (211)
97 1jfj_A Ehcabp, calcium-binding 99.7 1.1E-17 3.7E-22 135.8 8.8 123 306-433 9-133 (134)
98 2z66_A Variable lymphocyte rec 99.7 3.3E-18 1.1E-22 159.9 6.4 124 39-164 1-138 (306)
99 2aao_A CDPK, calcium-dependent 99.7 1.8E-17 6E-22 140.2 10.2 125 308-436 38-162 (166)
100 2bl0_C Myosin regulatory light 99.7 7.2E-17 2.5E-21 132.6 12.7 133 262-397 2-140 (142)
101 3qrx_A Centrin; calcium-bindin 99.7 5.3E-17 1.8E-21 137.7 12.0 140 258-399 20-165 (169)
102 2o6q_A Variable lymphocyte rec 99.7 6.2E-17 2.1E-21 148.4 12.9 122 43-166 12-147 (270)
103 3e6j_A Variable lymphocyte rec 99.7 1.7E-16 5.7E-21 141.8 15.2 145 43-222 19-174 (229)
104 3a8r_A Putative uncharacterize 99.7 2.5E-16 8.4E-21 134.8 15.4 122 310-436 39-171 (179)
105 2o6q_A Variable lymphocyte rec 99.7 1.3E-16 4.4E-21 146.3 14.4 169 57-235 57-234 (270)
106 4ds7_A Calmodulin, CAM; protei 99.7 7.1E-17 2.4E-21 133.3 11.4 138 258-398 3-146 (147)
107 2ct9_A Calcium-binding protein 99.7 9.4E-17 3.2E-21 141.2 12.8 124 308-436 40-183 (208)
108 3zyj_A Leucine-rich repeat-con 99.7 5.1E-17 1.7E-21 159.8 11.9 173 36-220 32-220 (440)
109 1dtl_A Cardiac troponin C; hel 99.7 1.2E-16 4E-21 134.3 12.5 141 257-399 9-159 (161)
110 2l4h_A Calcium and integrin-bi 99.7 3.4E-17 1.2E-21 144.6 9.5 119 312-435 74-202 (214)
111 3zyi_A Leucine-rich repeat-con 99.7 5.8E-17 2E-21 160.0 11.0 172 36-219 43-230 (452)
112 2bl0_B Myosin regulatory light 99.7 1.5E-16 5.1E-21 131.1 11.7 130 268-399 7-140 (145)
113 2lvv_A Flagellar calcium-bindi 99.7 2.7E-17 9.3E-22 146.6 7.6 127 306-435 60-198 (226)
114 2hps_A Coelenterazine-binding 99.7 1E-17 3.5E-22 144.5 4.7 150 259-435 7-166 (186)
115 3rgz_A Protein brassinosteroid 99.7 5.6E-17 1.9E-21 170.5 11.1 106 59-165 440-551 (768)
116 1top_A Troponin C; contractIle 99.7 1.3E-16 4.5E-21 134.1 11.1 141 258-400 12-161 (162)
117 3q5i_A Protein kinase; CDPK, m 99.7 1E-16 3.6E-21 160.3 12.2 128 308-438 366-500 (504)
118 3nyv_A Calmodulin-domain prote 99.7 2.1E-16 7.2E-21 157.3 14.2 127 308-437 346-482 (484)
119 3mwu_A Calmodulin-domain prote 99.7 3.1E-17 1.1E-21 163.4 8.0 130 308-438 342-484 (486)
120 3lij_A Calcium/calmodulin depe 99.7 6.2E-17 2.1E-21 161.5 9.7 128 308-438 357-491 (494)
121 2id5_A Lingo-1, leucine rich r 99.7 1.2E-16 4.1E-21 158.8 11.3 172 38-220 2-189 (477)
122 1ozn_A Reticulon 4 receptor; N 99.7 2.3E-16 7.9E-21 145.8 12.0 165 60-235 79-253 (285)
123 3bow_A Calpain-2 catalytic sub 99.7 5.1E-16 1.8E-20 160.3 15.8 158 260-433 525-696 (714)
124 3ll8_B Calcineurin subunit B t 99.7 4.5E-16 1.5E-20 129.8 12.6 138 262-401 2-146 (155)
125 2o6r_A Variable lymphocyte rec 99.7 6.4E-16 2.2E-20 132.2 13.8 128 39-168 1-140 (177)
126 3g39_A Variable lymphocyte rec 99.7 3.2E-16 1.1E-20 133.1 11.7 112 38-169 2-119 (170)
127 3cs1_A Flagellar calcium-bindi 99.7 2.3E-17 7.8E-22 146.4 4.7 90 345-435 105-195 (219)
128 3k21_A PFCDPK3, calcium-depend 99.7 4.7E-16 1.6E-20 134.7 12.8 137 258-398 44-190 (191)
129 1ogq_A PGIP-2, polygalacturona 99.7 8.6E-17 3E-21 150.7 8.7 175 59-245 99-281 (313)
130 3rfs_A Internalin B, repeat mo 99.7 3.8E-16 1.3E-20 143.3 12.8 154 58-221 60-219 (272)
131 2xwt_C Thyrotropin receptor; s 99.7 4.7E-17 1.6E-21 146.4 6.6 171 38-220 3-193 (239)
132 3e3r_A Calcyphosin, calcyphosi 99.7 2.8E-16 9.4E-21 137.6 11.3 152 262-415 33-198 (204)
133 2ggz_A Guanylyl cyclase-activa 99.7 2.4E-16 8.2E-21 138.9 10.8 127 308-435 30-163 (211)
134 1m45_A MLC1P, myosin light cha 99.7 1.2E-16 4.2E-21 132.2 8.1 133 264-398 2-146 (148)
135 1p9a_G Platelet glycoprotein I 99.7 1.8E-16 6.2E-21 146.7 10.1 158 60-231 30-194 (290)
136 2r9u_A Variable lymphocyte rec 99.7 5.8E-16 2E-20 131.9 12.4 114 36-169 3-122 (174)
137 4eco_A Uncharacterized protein 99.7 4.5E-17 1.5E-21 167.5 6.4 157 59-228 204-396 (636)
138 3fs7_A Parvalbumin, thymic; ca 99.7 5.8E-16 2E-20 121.1 11.3 100 330-434 6-108 (109)
139 3h4s_E KCBP interacting Ca2+-b 99.7 5.4E-17 1.9E-21 132.2 5.4 101 335-435 4-105 (135)
140 2ft3_A Biglycan; proteoglycan, 99.7 9E-16 3.1E-20 145.1 14.4 124 38-165 26-160 (332)
141 5pal_A Parvalbumin; calcium-bi 99.7 1.1E-15 3.9E-20 119.4 12.6 100 331-435 6-108 (109)
142 1xku_A Decorin; proteoglycan, 99.6 1E-15 3.4E-20 144.6 13.9 123 38-164 24-157 (330)
143 1rwy_A Parvalbumin alpha; EF-h 99.6 1.7E-15 5.9E-20 118.4 12.7 100 331-435 6-108 (109)
144 1bu3_A Calcium-binding protein 99.6 2E-15 7E-20 117.9 13.1 100 330-434 6-108 (109)
145 4ecn_A Leucine-rich repeat pro 99.6 9.6E-17 3.3E-21 168.7 7.0 177 59-249 446-661 (876)
146 1bjf_A Neurocalcin delta; calc 99.6 6.4E-16 2.2E-20 134.0 10.9 151 265-424 24-193 (193)
147 3pm8_A PFCDPK2, calcium-depend 99.6 2.5E-16 8.7E-21 137.1 8.3 139 259-399 50-195 (197)
148 2z80_A TOLL-like receptor 2, v 99.6 3.7E-16 1.3E-20 149.0 10.2 151 60-220 51-211 (353)
149 1s6c_A KV4 potassium channel-i 99.6 1.9E-15 6.4E-20 129.9 12.9 138 260-399 15-168 (183)
150 3m19_A Variable lymphocyte rec 99.6 6.9E-16 2.4E-20 139.8 10.4 160 42-221 3-169 (251)
151 3v47_A TOLL-like receptor 5B a 99.6 6.4E-16 2.2E-20 152.5 11.0 153 37-199 2-169 (455)
152 3dd4_A KV channel-interacting 99.6 3.1E-15 1.1E-19 133.4 14.4 152 259-418 60-227 (229)
153 2pvb_A Protein (parvalbumin); 99.6 1.7E-15 5.8E-20 118.2 11.2 99 331-434 6-107 (108)
154 4g8a_A TOLL-like receptor 4; l 99.6 1E-15 3.5E-20 157.3 12.2 152 49-210 36-200 (635)
155 2d8n_A Recoverin; structural g 99.6 2.4E-15 8.3E-20 131.9 12.4 125 308-435 10-135 (207)
156 4ezg_A Putative uncharacterize 99.6 4.7E-16 1.6E-20 135.4 7.7 148 59-220 42-194 (197)
157 2bec_A Calcineurin B homologou 99.6 1.1E-15 3.9E-20 133.5 10.2 137 259-400 22-184 (202)
158 2z62_A TOLL-like receptor 4, v 99.6 2.7E-15 9.4E-20 137.8 13.1 180 58-239 49-257 (276)
159 2wfh_A SLIT homolog 2 protein 99.6 3.5E-15 1.2E-19 129.3 13.0 137 64-235 13-154 (193)
160 1pva_A Parvalbumin; calcium bi 99.6 3.7E-15 1.3E-19 116.7 11.8 100 331-435 7-109 (110)
161 2z62_A TOLL-like receptor 4, v 99.6 1.1E-15 3.7E-20 140.6 10.1 164 49-221 12-191 (276)
162 3khe_A Calmodulin-like domain 99.6 1.2E-15 4.2E-20 131.9 9.9 135 261-400 35-186 (191)
163 3rfs_A Internalin B, repeat mo 99.6 1.8E-15 6.1E-20 138.8 11.4 152 59-221 39-195 (272)
164 3sg6_A Gcamp2, myosin light ch 99.6 5.7E-15 1.9E-19 142.1 15.1 138 259-398 305-448 (450)
165 1rro_A RAT oncomodulin; calciu 99.6 2.6E-15 8.9E-20 117.1 10.5 100 330-434 5-107 (108)
166 1s1e_A KV channel interacting 99.6 7.1E-15 2.4E-19 130.6 14.4 138 260-399 48-201 (224)
167 2v9t_B SLIT homolog 2 protein 99.6 3.6E-15 1.2E-19 132.2 12.4 116 57-173 52-173 (220)
168 2z7x_B TOLL-like receptor 1, v 99.6 1.4E-15 4.9E-20 152.7 10.1 176 59-247 322-509 (520)
169 3bow_A Calpain-2 catalytic sub 99.6 8.6E-15 2.9E-19 151.2 16.0 122 304-434 539-667 (714)
170 2z66_A Variable lymphocyte rec 99.6 5.7E-16 1.9E-20 144.7 6.5 154 57-220 48-212 (306)
171 2z81_A CD282 antigen, TOLL-lik 99.6 1.5E-15 5.2E-20 153.6 10.0 124 38-163 3-134 (549)
172 2ell_A Acidic leucine-rich nuc 99.6 6E-15 2E-19 124.9 12.2 128 60-221 23-161 (168)
173 2ehb_A Calcineurin B-like prot 99.6 8.5E-15 2.9E-19 128.5 13.5 161 259-430 30-207 (207)
174 1h6u_A Internalin H; cell adhe 99.6 2.6E-15 9E-20 140.2 10.5 143 60-220 62-208 (308)
175 3oja_B Anopheles plasmodium-re 99.6 2.9E-15 9.7E-20 153.0 11.7 105 59-165 73-184 (597)
176 2v70_A SLIT-2, SLIT homolog 2 99.6 4.5E-15 1.5E-19 131.5 11.0 116 57-173 53-174 (220)
177 2be4_A Hypothetical protein LO 99.6 8.2E-15 2.8E-19 134.2 12.8 140 283-435 9-176 (272)
178 2l2e_A Calcium-binding protein 99.6 8.3E-15 2.9E-19 126.6 12.1 124 309-435 3-127 (190)
179 3mse_B Calcium-dependent prote 99.6 8.8E-15 3E-19 125.4 12.1 130 262-399 35-178 (180)
180 1qxp_A MU-like calpain; M-calp 99.6 9.6E-16 3.3E-20 163.2 7.1 162 265-435 606-867 (900)
181 3zyi_A Leucine-rich repeat-con 99.6 8.1E-15 2.8E-19 144.6 13.1 174 58-234 96-317 (452)
182 3zyj_A Leucine-rich repeat-con 99.6 9.5E-15 3.2E-19 143.6 13.2 176 57-234 108-306 (440)
183 3vq2_A TLR4, TOLL-like recepto 99.6 3.6E-15 1.2E-19 152.7 10.6 163 60-232 398-570 (606)
184 1jba_A GCAP-2, protein (guanyl 99.6 2.9E-14 9.9E-19 124.7 14.9 146 262-415 18-186 (204)
185 1h6u_A Internalin H; cell adhe 99.6 7.3E-15 2.5E-19 137.2 11.7 148 57-221 81-231 (308)
186 3o6n_A APL1; leucine-rich repe 99.6 6E-15 2E-19 142.6 11.4 105 59-165 67-178 (390)
187 4b8c_D Glucose-repressible alc 99.6 2.8E-15 9.6E-20 155.9 9.6 138 57-205 220-363 (727)
188 2ct9_A Calcium-binding protein 99.6 2E-15 6.8E-20 132.7 7.3 141 259-401 22-184 (208)
189 2qac_A Myosin A tail domain in 99.6 2.4E-14 8.3E-19 118.0 13.1 133 262-398 10-145 (146)
190 2ifg_A High affinity nerve gro 99.6 8E-15 2.7E-19 139.4 11.6 120 39-174 1-125 (347)
191 2je0_A Acidic leucine-rich nuc 99.6 1.8E-14 6.3E-19 119.3 12.1 103 60-164 16-125 (149)
192 1h6t_A Internalin B; cell adhe 99.6 6.9E-15 2.4E-19 136.2 10.1 146 59-221 66-214 (291)
193 2aao_A CDPK, calcium-dependent 99.6 6.2E-15 2.1E-19 124.4 8.9 136 259-399 20-161 (166)
194 2zfd_A Calcineurin B-like prot 99.6 4E-14 1.4E-18 125.9 14.6 140 259-400 41-195 (226)
195 2r2i_A Guanylyl cyclase-activa 99.6 3.9E-14 1.3E-18 123.3 14.2 131 266-398 14-158 (198)
196 3q5i_A Protein kinase; CDPK, m 99.6 8.7E-15 3E-19 146.3 11.3 136 261-401 350-499 (504)
197 3t6q_A CD180 antigen; protein- 99.6 6.7E-15 2.3E-19 150.7 10.6 173 38-220 3-192 (606)
198 1xeu_A Internalin C; cellular 99.6 6.3E-15 2.2E-19 134.3 9.2 145 59-221 39-186 (263)
199 1w8a_A SLIT protein; signaling 99.6 1.9E-14 6.4E-19 124.7 11.4 112 61-173 29-147 (192)
200 1h6t_A Internalin B; cell adhe 99.6 6.5E-15 2.2E-19 136.4 9.0 146 59-221 44-192 (291)
201 3a8r_A Putative uncharacterize 99.6 2.8E-14 9.6E-19 122.0 12.0 133 262-399 24-170 (179)
202 3oja_B Anopheles plasmodium-re 99.5 7.7E-15 2.6E-19 149.8 9.9 147 60-218 50-203 (597)
203 2z63_A TOLL-like receptor 4, v 99.5 7.6E-15 2.6E-19 149.0 9.7 179 59-247 345-559 (570)
204 3v47_A TOLL-like receptor 5B a 99.5 7E-15 2.4E-19 145.1 9.1 155 81-246 275-435 (455)
205 1wwl_A Monocyte differentiatio 99.5 2.4E-15 8.1E-20 140.9 5.4 161 59-229 93-273 (312)
206 3e6j_A Variable lymphocyte rec 99.5 5.8E-14 2E-18 125.2 13.4 111 57-169 60-176 (229)
207 1fpw_A Yeast frequenin, calciu 99.5 4.5E-14 1.5E-18 121.9 12.2 123 310-435 4-127 (190)
208 1a9n_A U2A', U2A'; complex (nu 99.5 3.2E-14 1.1E-18 121.4 11.1 102 60-164 18-125 (176)
209 3vq2_A TLR4, TOLL-like recepto 99.5 4.6E-15 1.6E-19 151.9 6.7 152 59-219 348-509 (606)
210 3lij_A Calcium/calmodulin depe 99.5 1E-14 3.5E-19 145.5 9.0 137 261-402 341-491 (494)
211 2xot_A Amphoterin-induced prot 99.5 2.9E-14 9.9E-19 136.2 11.8 160 43-227 10-181 (361)
212 1jfj_A Ehcabp, calcium-binding 99.5 9.8E-15 3.3E-19 118.2 7.2 124 268-397 2-133 (134)
213 2lvv_A Flagellar calcium-bindi 99.5 1.2E-14 4.2E-19 129.3 8.5 140 259-400 44-199 (226)
214 2xwt_C Thyrotropin receptor; s 99.5 9.6E-15 3.3E-19 131.2 7.7 156 57-227 51-223 (239)
215 3nyv_A Calmodulin-domain prote 99.5 1.8E-14 6E-19 143.4 10.2 136 261-401 330-482 (484)
216 3o53_A Protein LRIM1, AGAP0063 99.5 2.1E-15 7.1E-20 141.6 3.3 137 80-228 119-258 (317)
217 2jul_A Calsenilin; EF-hand, ca 99.5 1.1E-13 3.6E-18 125.7 14.2 138 260-399 88-241 (256)
218 2z7x_B TOLL-like receptor 1, v 99.5 2.4E-14 8.1E-19 143.8 10.8 152 62-227 303-462 (520)
219 2kyc_A Parvalbumin-3, parvalbu 99.5 2.1E-15 7.3E-20 117.6 2.5 100 330-434 5-107 (108)
220 3oja_A Leucine-rich immune mol 99.5 3.5E-15 1.2E-19 148.3 4.6 137 80-228 119-258 (487)
221 3a4u_B Multiple coagulation fa 99.5 6.6E-15 2.3E-19 120.9 5.2 98 336-433 29-142 (143)
222 3t6q_A CD180 antigen; protein- 99.5 5.2E-14 1.8E-18 144.0 13.0 165 60-235 399-575 (606)
223 1m9s_A Internalin B; cell inva 99.5 3.8E-14 1.3E-18 143.8 11.7 147 58-221 62-211 (605)
224 1ziw_A TOLL-like receptor 3; i 99.5 3.4E-14 1.2E-18 147.4 11.6 105 59-164 428-548 (680)
225 3o6n_A APL1; leucine-rich repe 99.5 8.8E-14 3E-18 134.4 13.6 173 59-243 91-329 (390)
226 1djx_A PLC-D1, phosphoinositid 99.5 1.1E-14 3.6E-19 147.2 7.3 123 308-436 22-150 (624)
227 1m9s_A Internalin B; cell inva 99.5 2.1E-14 7.2E-19 145.8 9.5 166 59-244 41-209 (605)
228 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 4.1E-14 1.4E-18 143.5 11.6 152 58-222 350-512 (562)
229 2z81_A CD282 antigen, TOLL-lik 99.5 4.3E-14 1.5E-18 142.9 11.6 164 59-236 332-527 (549)
230 1wwl_A Monocyte differentiatio 99.5 7.3E-15 2.5E-19 137.5 5.5 151 62-221 64-242 (312)
231 2o6s_A Variable lymphocyte rec 99.5 1.8E-13 6.3E-18 120.0 14.0 108 57-166 48-162 (208)
232 2z63_A TOLL-like receptor 4, v 99.5 5.6E-14 1.9E-18 142.6 12.2 151 61-220 28-190 (570)
233 1g8i_A Frequenin, neuronal cal 99.5 1E-13 3.6E-18 119.6 12.1 122 311-435 5-127 (190)
234 4ay9_X Follicle-stimulating ho 99.5 2.1E-14 7.1E-19 136.7 8.3 188 39-230 2-223 (350)
235 4b8c_D Glucose-repressible alc 99.5 9.4E-15 3.2E-19 151.9 6.4 143 74-229 217-362 (727)
236 4glp_A Monocyte differentiatio 99.5 1.4E-14 4.8E-19 135.5 6.9 152 58-221 114-286 (310)
237 3cvr_A Invasion plasmid antige 99.5 6.4E-14 2.2E-18 140.8 12.1 156 60-230 79-252 (571)
238 2z80_A TOLL-like receptor 2, v 99.5 1.2E-14 3.9E-19 138.7 6.4 154 57-221 72-236 (353)
239 1xku_A Decorin; proteoglycan, 99.5 4.5E-14 1.5E-18 133.2 10.4 149 60-221 120-277 (330)
240 2ft3_A Biglycan; proteoglycan, 99.5 9.4E-14 3.2E-18 131.1 12.2 179 57-242 74-274 (332)
241 3j0a_A TOLL-like receptor 5; m 99.5 5E-14 1.7E-18 149.5 11.2 156 56-220 19-187 (844)
242 2id5_A Lingo-1, leucine rich r 99.5 1.8E-14 6E-19 143.1 6.8 109 57-166 52-166 (477)
243 4glp_A Monocyte differentiatio 99.5 1.3E-14 4.3E-19 135.8 5.4 160 60-229 90-271 (310)
244 1ij5_A Plasmodial specific LAV 99.5 2.2E-14 7.5E-19 134.3 6.9 117 308-434 133-250 (323)
245 3fs7_A Parvalbumin, thymic; ca 99.5 1.4E-13 4.9E-18 107.3 10.5 99 297-398 6-108 (109)
246 5pal_A Parvalbumin; calcium-bi 99.5 3E-13 1E-17 105.5 12.4 99 298-399 6-108 (109)
247 2o6r_A Variable lymphocyte rec 99.5 3.4E-13 1.2E-17 115.1 13.6 123 63-221 9-138 (177)
248 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 5.7E-14 2E-18 142.4 10.0 152 61-227 331-491 (562)
249 4ezg_A Putative uncharacterize 99.5 6.7E-14 2.3E-18 121.7 8.9 107 58-166 63-173 (197)
250 1ziw_A TOLL-like receptor 3; i 99.5 8.1E-14 2.8E-18 144.6 11.0 149 61-220 25-184 (680)
251 2pvb_A Protein (parvalbumin); 99.5 2.9E-13 9.9E-18 105.4 11.5 98 298-398 6-107 (108)
252 3mwu_A Calmodulin-domain prote 99.5 5.8E-14 2E-18 139.7 9.4 137 261-400 326-482 (486)
253 3cvr_A Invasion plasmid antige 99.5 1.5E-13 5.3E-18 138.0 12.3 94 61-167 59-155 (571)
254 1bu3_A Calcium-binding protein 99.5 3.3E-13 1.1E-17 105.2 11.5 102 294-398 3-108 (109)
255 1qxp_A MU-like calpain; M-calp 99.5 8E-14 2.7E-18 148.4 10.4 154 264-433 532-700 (900)
256 2lmt_A Calmodulin-related prot 99.5 6.1E-13 2.1E-17 109.9 13.0 103 283-398 44-146 (148)
257 2obh_A Centrin-2; DNA repair c 99.5 2.9E-13 9.9E-18 111.2 10.5 135 262-398 2-142 (143)
258 1dce_A Protein (RAB geranylger 99.5 2.3E-13 7.9E-18 137.3 11.7 119 82-213 442-566 (567)
259 4fmz_A Internalin; leucine ric 99.5 1.9E-13 6.6E-18 129.8 10.5 149 57-221 173-325 (347)
260 3oja_A Leucine-rich immune mol 99.5 4.2E-14 1.4E-18 140.5 6.1 132 81-228 99-233 (487)
261 1pva_A Parvalbumin; calcium bi 99.4 4E-13 1.4E-17 104.9 9.9 100 297-399 6-109 (110)
262 1rwy_A Parvalbumin alpha; EF-h 99.4 3.3E-13 1.1E-17 105.2 9.4 99 298-399 6-108 (109)
263 1xeu_A Internalin C; cellular 99.4 5.4E-14 1.8E-18 128.1 5.5 144 60-221 18-164 (263)
264 4g8a_A TOLL-like receptor 4; l 99.4 4.1E-13 1.4E-17 137.9 12.1 170 58-236 417-596 (635)
265 3o53_A Protein LRIM1, AGAP0063 99.4 7E-14 2.4E-18 131.1 5.5 131 81-227 99-232 (317)
266 1rro_A RAT oncomodulin; calciu 99.4 4.8E-13 1.6E-17 104.1 9.4 98 298-398 6-107 (108)
267 3u0k_A Rcamp; fluorescent prot 99.4 9.7E-13 3.3E-17 123.6 13.0 119 264-398 320-438 (440)
268 2lv7_A Calcium-binding protein 99.4 2.2E-13 7.5E-18 104.0 7.1 65 370-434 35-99 (100)
269 3h4s_E KCBP interacting Ca2+-b 99.4 1.9E-13 6.6E-18 111.0 6.7 98 304-401 10-107 (135)
270 3g06_A SSPH2 (leucine-rich rep 99.4 1.1E-12 3.8E-17 133.4 13.6 34 187-220 263-297 (622)
271 3j0a_A TOLL-like receptor 5; m 99.4 5.4E-13 1.9E-17 141.6 11.7 154 57-220 44-217 (844)
272 3g39_A Variable lymphocyte rec 99.4 1.1E-12 3.9E-17 111.0 11.0 119 82-235 10-131 (170)
273 4fmz_A Internalin; leucine ric 99.4 1.6E-12 5.4E-17 123.4 12.3 100 60-164 65-167 (347)
274 2r9u_A Variable lymphocyte rec 99.4 2.1E-12 7.2E-17 109.7 11.7 104 83-221 14-119 (174)
275 3bz5_A Internalin-J, INLJ; leu 99.4 1.1E-12 3.8E-17 129.1 11.4 149 60-221 63-226 (457)
276 1exr_A Calmodulin; high resolu 99.4 1.2E-12 4.1E-17 108.0 9.9 137 260-398 4-146 (148)
277 1s6j_A CDPK, calcium-dependent 99.4 1.9E-13 6.6E-18 101.8 4.5 86 346-434 1-86 (87)
278 1o6v_A Internalin A; bacterial 99.4 1.1E-12 3.8E-17 129.7 11.3 125 79-220 241-366 (466)
279 3fwb_A Cell division control p 99.4 2.6E-12 8.8E-17 107.4 11.8 119 265-399 42-160 (161)
280 3g06_A SSPH2 (leucine-rich rep 99.4 1.5E-12 5.2E-17 132.3 12.4 56 59-117 79-134 (622)
281 2lhi_A Calmodulin, serine/thre 99.4 5.8E-13 2E-17 113.4 7.8 118 265-399 30-147 (176)
282 3bz5_A Internalin-J, INLJ; leu 99.4 1.1E-12 3.8E-17 129.1 10.9 150 59-221 40-205 (457)
283 1nya_A Calerythrin; EF-hand, m 99.4 3E-12 1E-16 108.8 12.1 102 333-435 6-130 (176)
284 1o6v_A Internalin A; bacterial 99.4 1.2E-12 4.1E-17 129.5 11.0 147 58-221 240-389 (466)
285 2ell_A Acidic leucine-rich nuc 99.4 1.3E-12 4.3E-17 110.5 9.6 106 58-165 46-160 (168)
286 1jl5_A Outer protein YOPM; leu 99.4 2.1E-12 7.2E-17 127.0 12.5 103 56-166 106-209 (454)
287 2jnf_A Troponin C; stretch act 99.4 2.8E-12 9.6E-17 106.9 11.4 101 334-435 13-119 (158)
288 2zkm_X 1-phosphatidylinositol- 99.4 7.4E-13 2.5E-17 137.0 9.4 120 308-437 159-299 (799)
289 2kz2_A Calmodulin, CAM; TR2C, 99.4 2.3E-12 8E-17 97.4 9.8 71 365-435 23-93 (94)
290 1sjj_A Actinin; 3-helix bundle 99.4 5.8E-13 2E-17 141.7 8.3 120 308-436 736-860 (863)
291 3ox6_A Calcium-binding protein 99.4 3E-12 1E-16 105.9 10.9 101 334-435 11-116 (153)
292 1a9n_A U2A', U2A'; complex (nu 99.4 1.1E-12 3.7E-17 111.9 8.0 103 60-164 41-152 (176)
293 1dce_A Protein (RAB geranylger 99.4 2.7E-12 9.2E-17 129.5 11.9 137 76-228 404-552 (567)
294 2je0_A Acidic leucine-rich nuc 99.3 1.8E-12 6.3E-17 107.1 8.3 102 58-161 39-149 (149)
295 3i5g_C Myosin catalytic light 99.3 7.1E-12 2.4E-16 104.7 12.0 117 266-399 31-151 (159)
296 2ccm_A Calexcitin; EF hand, ca 99.3 3.9E-12 1.3E-16 109.7 10.5 102 334-435 12-137 (191)
297 1s6i_A CDPK, calcium-dependent 99.3 1.5E-12 5.2E-17 112.2 7.8 102 333-435 9-110 (188)
298 2f2o_A Calmodulin fused with c 99.3 4.3E-12 1.5E-16 108.2 10.3 102 333-435 10-112 (179)
299 2sas_A Sarcoplasmic calcium-bi 99.3 4.7E-12 1.6E-16 108.4 10.2 102 334-435 8-133 (185)
300 1jl5_A Outer protein YOPM; leu 99.3 8.5E-12 2.9E-16 122.7 12.5 94 61-164 131-227 (454)
301 1tiz_A Calmodulin-related prot 99.3 4.3E-12 1.5E-16 89.2 7.6 65 372-436 2-66 (67)
302 2mys_C Myosin; muscle protein, 99.3 1.8E-11 6.3E-16 100.7 12.5 100 334-435 8-113 (149)
303 2hpk_A Photoprotein berovin; s 99.3 9.6E-12 3.3E-16 108.9 11.4 127 265-400 55-191 (208)
304 1ds9_A Outer arm dynein; leuci 99.3 7.7E-15 2.6E-19 127.8 -8.7 101 60-164 47-152 (198)
305 2kyc_A Parvalbumin-3, parvalbu 99.3 5.7E-13 2E-17 103.7 2.6 100 296-398 4-107 (108)
306 2ovk_C Myosin catalytic light 99.3 1.7E-11 6E-16 102.2 11.8 108 279-400 41-152 (159)
307 1wdc_C Scallop myosin; calcium 99.3 7.1E-12 2.4E-16 104.3 9.3 100 334-435 9-112 (156)
308 3nso_A Protein S100-A3; EF-han 99.3 3.8E-12 1.3E-16 96.7 6.9 65 371-435 10-81 (101)
309 1djx_A PLC-D1, phosphoinositid 99.3 2.6E-12 8.9E-17 129.8 7.4 129 265-399 10-149 (624)
310 2ast_B S-phase kinase-associat 99.3 3.1E-13 1.1E-17 127.7 0.2 84 78-162 90-178 (336)
311 2ca6_A RAN GTPase-activating p 99.3 3.1E-13 1E-17 130.4 -0.2 20 199-218 236-255 (386)
312 3j04_B Myosin regulatory light 99.3 8.5E-12 2.9E-16 102.1 8.4 69 330-399 72-140 (143)
313 1eg3_A Dystrophin; EF-hand lik 99.3 3.2E-11 1.1E-15 107.0 12.5 96 336-435 134-242 (261)
314 3akb_A Putative calcium bindin 99.3 1.2E-11 4.1E-16 103.8 9.5 102 334-435 4-126 (166)
315 2ca6_A RAN GTPase-activating p 99.3 5.3E-13 1.8E-17 128.7 0.8 157 59-220 92-287 (386)
316 3i5g_B Myosin regulatory light 99.3 1.5E-11 5.2E-16 102.0 9.5 66 332-399 83-148 (153)
317 2ast_B S-phase kinase-associat 99.3 4.8E-13 1.6E-17 126.4 0.2 153 59-218 91-258 (336)
318 3n22_A Protein S100-A2; EF-han 99.3 1.4E-11 4.7E-16 93.4 8.2 65 371-435 11-82 (98)
319 1wlz_A DJBP, CAP-binding prote 99.3 1.5E-11 5E-16 95.1 8.5 84 351-436 6-89 (105)
320 2joj_A Centrin protein; N-term 99.3 7.6E-12 2.6E-16 90.6 6.5 68 370-437 6-73 (77)
321 2ktg_A Calmodulin, putative; e 99.3 1.6E-11 5.3E-16 90.9 8.2 69 371-439 14-82 (85)
322 2mys_B Myosin; muscle protein, 99.3 3E-11 1E-15 101.6 10.7 67 333-400 94-160 (166)
323 1avs_A Troponin C; muscle cont 99.2 1.9E-11 6.5E-16 91.5 8.3 68 370-437 19-86 (90)
324 2b1u_A Calmodulin-like protein 99.2 8.2E-12 2.8E-16 88.9 5.9 66 370-435 5-70 (71)
325 3a4u_B Multiple coagulation fa 99.2 4.3E-12 1.5E-16 104.0 4.9 96 302-397 32-142 (143)
326 1uhk_A Aequorin 2, aequorin; E 99.2 2.1E-11 7E-16 105.1 9.1 100 334-434 16-136 (191)
327 1w7j_B Myosin light chain 1; m 99.2 5.1E-12 1.7E-16 104.5 4.9 101 334-435 10-115 (151)
328 1k9u_A Polcalcin PHL P 7; poll 99.2 1.9E-11 6.6E-16 88.7 7.4 64 371-435 3-66 (78)
329 2l4h_A Calcium and integrin-bi 99.2 2.2E-11 7.4E-16 107.1 9.0 139 259-399 44-202 (214)
330 2jjz_A Ionized calcium-binding 99.2 1.6E-11 5.4E-16 101.5 7.5 85 333-423 49-133 (150)
331 2lnk_A Protein S100-A4; EF-han 99.2 2.5E-11 8.4E-16 94.2 7.9 65 371-435 22-93 (113)
332 1ggw_A Protein (CDC4P); light 99.2 2.7E-11 9.1E-16 98.7 8.5 96 334-434 5-103 (140)
333 2kn2_A Calmodulin; S MAPK phos 99.2 4.5E-11 1.5E-15 89.8 9.1 65 371-435 9-73 (92)
334 3zwh_A Protein S100-A4; Ca-bin 99.2 3E-11 1E-15 92.4 8.1 65 371-435 13-84 (104)
335 2kld_A Polycystin-2; PC2, PKD2 99.2 9.3E-13 3.2E-17 104.8 -0.4 84 348-437 22-110 (123)
336 3ohm_B 1-phosphatidylinositol- 99.2 7E-11 2.4E-15 122.3 13.4 119 308-436 163-302 (885)
337 4eto_A Protein S100-A4; calciu 99.2 2.9E-11 1E-15 90.7 7.7 65 371-435 10-81 (93)
338 3li6_A Calcium-binding protein 99.2 6E-12 2E-16 88.2 3.6 62 374-435 3-64 (66)
339 1qv0_A Obelin, OBL; photoprote 99.2 2.8E-11 9.6E-16 104.6 8.4 100 334-434 20-140 (195)
340 1dgu_A Calcium-saturated CIB; 99.2 3.1E-11 1.1E-15 103.3 8.2 139 259-399 13-171 (183)
341 1wdc_B Scallop myosin; calcium 99.2 7.5E-11 2.6E-15 98.0 10.2 66 332-399 85-150 (156)
342 2opo_A Polcalcin CHE A 3; calc 99.2 4.7E-11 1.6E-15 88.5 8.0 65 371-436 11-75 (86)
343 1c7v_A CAVP, calcium vector pr 99.2 2.2E-11 7.7E-16 89.1 5.6 67 369-436 7-74 (81)
344 1q80_A SCP, sarcoplasmic calci 99.2 5.4E-11 1.8E-15 100.7 8.7 100 334-435 6-122 (174)
345 1ds9_A Outer arm dynein; leuci 99.2 6.3E-13 2.2E-17 115.6 -3.6 134 73-220 40-185 (198)
346 3rm1_A Protein S100-B; alpha-h 99.2 7.2E-11 2.5E-15 88.6 8.0 64 371-435 9-80 (92)
347 1fi6_A EH domain protein REPS1 99.2 6.7E-11 2.3E-15 88.8 7.8 62 371-434 9-70 (92)
348 2y5i_A S100Z, S100 calcium bin 99.2 7.9E-11 2.7E-15 89.5 8.2 65 371-435 10-81 (99)
349 2ifg_A High affinity nerve gro 99.2 1E-10 3.4E-15 110.9 10.6 79 84-165 11-93 (347)
350 1j7q_A CAVP, calcium vector pr 99.2 5.8E-11 2E-15 88.0 7.1 68 370-438 13-83 (86)
351 1qjt_A EH1, epidermal growth f 99.2 4E-11 1.4E-15 91.2 6.2 62 370-433 10-71 (99)
352 2pmy_A RAS and EF-hand domain- 99.2 9.6E-11 3.3E-15 87.8 8.2 64 370-435 26-89 (91)
353 2kld_A Polycystin-2; PC2, PKD2 99.2 2.2E-12 7.6E-17 102.6 -1.0 104 291-401 2-110 (123)
354 1c07_A Protein (epidermal grow 99.2 5.8E-11 2E-15 89.7 6.8 62 370-433 9-70 (95)
355 1qx2_A Vitamin D-dependent cal 99.2 4.1E-11 1.4E-15 86.5 5.7 66 370-435 4-73 (76)
356 1j55_A S-100P protein; metal b 99.1 6.5E-11 2.2E-15 89.4 6.9 65 371-435 9-80 (95)
357 3goz_A Leucine-rich repeat-con 99.1 4.1E-12 1.4E-16 121.4 -0.0 103 61-164 80-208 (362)
358 2d58_A Allograft inflammatory 99.1 1.3E-10 4.5E-15 90.0 8.6 68 370-437 31-98 (107)
359 2lv7_A Calcium-binding protein 99.1 8.7E-11 3E-15 89.4 7.3 64 333-397 35-98 (100)
360 4drw_A Protein S100-A10/annexi 99.1 3E-11 1E-15 94.7 4.8 66 334-400 15-84 (121)
361 4drw_A Protein S100-A10/annexi 99.1 6.1E-11 2.1E-15 92.9 6.2 63 371-434 15-82 (121)
362 2wcb_A Protein S100-A12; calci 99.1 5.1E-11 1.7E-15 90.0 5.6 65 371-435 12-83 (95)
363 3cs1_A Flagellar calcium-bindi 99.1 4.8E-12 1.6E-16 111.9 -0.3 122 312-434 27-157 (219)
364 3dtp_E RLC, myosin regulatory 99.1 4.6E-10 1.6E-14 97.2 12.3 97 332-433 55-152 (196)
365 3goz_A Leucine-rich repeat-con 99.1 1.3E-11 4.4E-16 117.9 2.5 102 62-164 23-150 (362)
366 2ovk_B RLC, myosin regulatory 99.1 9.4E-11 3.2E-15 97.1 7.4 66 332-399 83-148 (153)
367 1yx7_A Calsensin, LAN3-6 antig 99.1 7.2E-11 2.5E-15 86.8 5.7 66 370-435 6-77 (83)
368 3nxa_A Protein S100-A16; S100 99.1 1.1E-10 3.8E-15 88.7 6.8 66 371-436 11-84 (100)
369 4ay9_X Follicle-stimulating ho 99.1 4.8E-11 1.6E-15 113.3 5.8 160 64-228 12-197 (350)
370 2kz2_A Calmodulin, CAM; TR2C, 99.1 3.8E-10 1.3E-14 85.1 9.6 79 319-398 14-92 (94)
371 2kgr_A Intersectin-1; structur 99.1 2.1E-10 7.1E-15 89.3 8.3 61 371-433 14-74 (111)
372 1wy9_A Allograft inflammatory 99.1 2.3E-10 7.9E-15 94.1 8.7 85 333-423 47-131 (147)
373 1iq3_A Ralbp1-interacting prot 99.1 6E-11 2E-15 92.0 4.1 62 370-433 21-82 (110)
374 1k2h_A S100A1, S-100 protein, 99.1 1.5E-10 5.1E-15 87.1 6.2 65 371-435 9-80 (93)
375 2zkm_X 1-phosphatidylinositol- 99.1 1.4E-10 5E-15 120.0 7.7 126 264-399 144-297 (799)
376 2jjz_A Ionized calcium-binding 99.1 1.6E-10 5.6E-15 95.4 6.6 93 333-436 23-115 (150)
377 2h2k_A Protein S100-A13; calci 99.1 1.5E-10 5.2E-15 88.8 5.9 65 371-435 22-90 (106)
378 1eh2_A EPS15; calcium binding, 99.1 2.8E-10 9.6E-15 87.4 7.3 60 371-433 15-74 (106)
379 2kax_A Protein S100-A5; EF-han 99.1 1.8E-10 6E-15 86.5 5.8 64 371-435 10-78 (92)
380 1s6j_A CDPK, calcium-dependent 99.1 8.3E-11 2.8E-15 87.3 3.9 85 309-397 1-85 (87)
381 1cb1_A Calbindin D9K; calcium- 99.1 1.2E-10 4.1E-15 84.4 4.6 66 370-435 6-75 (78)
382 2jq6_A EH domain-containing pr 99.0 4.7E-10 1.6E-14 89.9 8.3 61 370-433 50-110 (139)
383 3qr0_A Phospholipase C-beta (P 99.0 2.7E-10 9.2E-15 117.3 8.3 121 308-436 166-309 (816)
384 1z7x_W Ribonuclease inhibitor; 99.0 1.9E-11 6.4E-16 120.6 -0.5 104 60-165 198-326 (461)
385 1wy9_A Allograft inflammatory 99.0 1.8E-10 6.1E-15 94.8 4.9 66 370-435 47-112 (147)
386 1h8b_A ACT-EF34, alpha-actinin 99.0 1E-09 3.5E-14 77.9 8.2 61 368-436 7-72 (75)
387 1xk4_C Calgranulin B; S100 fam 99.0 6.8E-10 2.3E-14 86.7 7.9 84 334-423 12-102 (113)
388 1xk4_A Calgranulin A; S100 fam 99.0 1.3E-10 4.3E-15 87.5 3.5 62 372-433 11-75 (93)
389 1tiz_A Calmodulin-related prot 99.0 5.7E-10 2E-14 78.1 6.7 64 335-399 2-65 (67)
390 1k8u_A S100A6, calcyclin, CACY 99.0 2.7E-10 9.3E-15 85.1 4.8 64 371-434 10-78 (90)
391 2kn2_A Calmodulin; S MAPK phos 99.0 4E-09 1.4E-13 79.0 10.8 68 333-401 8-75 (92)
392 2opo_A Polcalcin CHE A 3; calc 99.0 2.3E-09 8E-14 79.1 9.4 67 333-401 10-76 (86)
393 3nso_A Protein S100-A3; EF-han 99.0 1E-09 3.5E-14 83.2 7.4 67 334-400 10-82 (101)
394 1a4p_A S100A10; S100 family, E 99.0 3.8E-10 1.3E-14 85.3 4.8 63 371-434 9-76 (96)
395 1k9u_A Polcalcin PHL P 7; poll 99.0 1.3E-09 4.6E-14 78.8 7.5 65 334-400 3-67 (78)
396 1psr_A Psoriasin, S100A7; EF-h 99.0 2.3E-10 7.9E-15 87.2 3.4 62 372-434 11-79 (100)
397 1xk4_C Calgranulin B; S100 fam 99.0 1.8E-09 6.2E-14 84.2 8.4 65 371-435 12-84 (113)
398 3n22_A Protein S100-A2; EF-han 99.0 2.8E-09 9.5E-14 80.6 8.7 67 334-400 11-83 (98)
399 2joj_A Centrin protein; N-term 98.9 2.3E-09 8E-14 77.2 7.5 66 333-399 6-71 (77)
400 2hps_A Coelenterazine-binding 98.9 4E-10 1.4E-14 96.5 3.9 90 308-400 76-167 (186)
401 4eto_A Protein S100-A4; calciu 98.9 3.5E-09 1.2E-13 79.2 8.5 68 333-400 9-82 (93)
402 3li6_A Calcium-binding protein 98.9 5E-10 1.7E-14 78.1 3.6 62 337-399 3-64 (66)
403 3zwh_A Protein S100-A4; Ca-bin 98.9 4.1E-09 1.4E-13 80.4 9.0 67 334-400 13-85 (104)
404 2b1u_A Calmodulin-like protein 98.9 1.5E-09 5E-14 77.0 6.1 67 331-398 3-69 (71)
405 1snl_A Nucleobindin 1, calnuc; 98.9 2.5E-09 8.5E-14 82.1 7.6 64 372-435 21-100 (103)
406 1sjj_A Actinin; 3-helix bundle 98.9 6.6E-10 2.3E-14 118.2 5.8 120 313-434 690-824 (863)
407 2ktg_A Calmodulin, putative; e 98.9 4.3E-09 1.5E-13 77.5 8.5 66 334-400 14-79 (85)
408 1wlz_A DJBP, CAP-binding prote 98.9 3.7E-09 1.3E-13 81.3 8.5 85 313-400 5-89 (105)
409 1avs_A Troponin C; muscle cont 98.9 5.6E-09 1.9E-13 77.8 9.0 66 333-399 19-84 (90)
410 2pmy_A RAS and EF-hand domain- 98.9 4E-09 1.4E-13 78.9 8.1 64 333-399 26-89 (91)
411 1eg3_A Dystrophin; EF-hand lik 98.9 6.1E-09 2.1E-13 92.4 10.5 89 307-399 142-242 (261)
412 1z7x_W Ribonuclease inhibitor; 98.9 1.5E-10 5.2E-15 114.1 0.1 154 60-219 55-239 (461)
413 3nxa_A Protein S100-A16; S100 98.9 7.1E-09 2.4E-13 78.6 9.4 69 333-401 10-85 (100)
414 2lnk_A Protein S100-A4; EF-han 98.9 5.3E-09 1.8E-13 81.0 8.8 68 333-400 21-94 (113)
415 1qls_A S100C protein, calgizza 98.9 1.5E-09 5.1E-14 82.6 5.4 62 372-433 14-82 (99)
416 1c7v_A CAVP, calcium vector pr 98.9 1.5E-09 5E-14 79.3 5.1 70 331-401 6-75 (81)
417 1fi6_A EH domain protein REPS1 98.9 4.7E-09 1.6E-13 78.6 7.8 63 334-399 9-71 (92)
418 1qjt_A EH1, epidermal growth f 98.9 3.1E-09 1.1E-13 80.6 6.7 64 333-399 10-73 (99)
419 1qx2_A Vitamin D-dependent cal 98.9 3.7E-09 1.3E-13 75.9 6.8 68 332-400 3-74 (76)
420 1c07_A Protein (epidermal grow 98.9 3.8E-09 1.3E-13 79.6 7.0 64 333-399 9-72 (95)
421 2kgr_A Intersectin-1; structur 98.9 5.8E-09 2E-13 81.0 8.2 64 333-399 13-76 (111)
422 3rm1_A Protein S100-B; alpha-h 98.9 9.5E-09 3.3E-13 76.9 8.8 66 334-400 9-81 (92)
423 1cb1_A Calbindin D9K; calcium- 98.8 3.9E-09 1.3E-13 76.3 6.0 69 332-400 5-76 (78)
424 1yx7_A Calsensin, LAN3-6 antig 98.8 4.4E-09 1.5E-13 77.0 6.4 69 332-400 5-78 (83)
425 2y5i_A S100Z, S100 calcium bin 98.8 1.2E-08 4.2E-13 77.3 8.6 68 333-400 9-82 (99)
426 1j55_A S-100P protein; metal b 98.8 7.8E-09 2.7E-13 77.8 7.4 68 333-400 8-81 (95)
427 2kax_A Protein S100-A5; EF-han 98.8 7.1E-09 2.4E-13 77.6 6.9 67 334-400 10-79 (92)
428 3un9_A NLR family member X1; l 98.8 1.3E-10 4.4E-15 111.0 -4.0 155 60-220 71-252 (372)
429 2h2k_A Protein S100-A13; calci 98.8 7.8E-09 2.7E-13 79.2 6.8 67 334-400 22-91 (106)
430 3fia_A Intersectin-1; EH 1 dom 98.8 1.3E-08 4.4E-13 78.9 7.5 60 371-433 33-92 (121)
431 1iq3_A Ralbp1-interacting prot 98.8 5E-09 1.7E-13 81.1 5.2 65 332-399 20-84 (110)
432 2wcb_A Protein S100-A12; calci 98.8 7.9E-09 2.7E-13 77.8 6.2 67 333-399 11-83 (95)
433 1k2h_A S100A1, S-100 protein, 98.8 1.2E-08 4.2E-13 76.4 7.3 67 333-400 8-81 (93)
434 3ohm_B 1-phosphatidylinositol- 98.8 2.9E-08 1E-12 102.9 12.2 125 265-399 149-301 (885)
435 1j7q_A CAVP, calcium vector pr 98.8 2E-08 6.8E-13 74.1 8.1 65 333-399 13-80 (86)
436 1xk4_A Calgranulin A; S100 fam 98.7 8.9E-09 3.1E-13 77.3 5.3 66 334-400 10-78 (93)
437 2d58_A Allograft inflammatory 98.7 2.3E-08 8E-13 77.1 7.8 66 334-400 32-97 (107)
438 1eh2_A EPS15; calcium binding, 98.7 3.1E-08 1.1E-12 75.9 8.1 62 334-399 15-76 (106)
439 2jq6_A EH domain-containing pr 98.7 3.8E-08 1.3E-12 78.8 8.2 63 333-399 50-112 (139)
440 1k8u_A S100A6, calcyclin, CACY 98.7 1.9E-08 6.5E-13 74.8 6.1 66 334-400 10-80 (90)
441 1snl_A Nucleobindin 1, calnuc; 98.7 3.6E-08 1.2E-12 75.4 7.8 67 333-399 19-100 (103)
442 3sb4_A Hypothetical leucine ri 98.7 9.4E-09 3.2E-13 96.5 5.0 82 128-220 225-310 (329)
443 1qls_A S100C protein, calgizza 98.7 4.4E-08 1.5E-12 74.3 7.6 67 334-400 13-85 (99)
444 1psr_A Psoriasin, S100A7; EF-h 98.6 2.6E-08 8.8E-13 75.7 4.5 67 333-400 9-81 (100)
445 1io0_A Tropomodulin; LRR prote 98.6 2.5E-08 8.6E-13 85.2 5.0 105 60-164 35-163 (185)
446 1a4p_A S100A10; S100 family, E 98.6 7.1E-08 2.4E-12 72.6 6.3 67 333-400 8-78 (96)
447 3ogk_B Coronatine-insensitive 98.5 9.5E-09 3.3E-13 104.5 -0.5 26 194-219 280-305 (592)
448 3qr0_A Phospholipase C-beta (P 98.5 1.7E-07 5.8E-12 96.6 8.5 117 275-399 166-308 (816)
449 3un9_A NLR family member X1; l 98.5 6.7E-08 2.3E-12 92.1 4.0 134 60-198 100-253 (372)
450 1h8b_A ACT-EF34, alpha-actinin 98.5 6.6E-07 2.2E-11 63.3 8.1 60 330-398 6-70 (75)
451 3fia_A Intersectin-1; EH 1 dom 98.4 7.9E-07 2.7E-11 68.9 8.0 62 334-399 33-94 (121)
452 3ogk_B Coronatine-insensitive 98.3 9.7E-08 3.3E-12 97.0 1.9 100 62-161 139-252 (592)
453 1io0_A Tropomodulin; LRR prote 98.3 1.5E-07 5.3E-12 80.3 2.8 90 75-164 30-135 (185)
454 3sb4_A Hypothetical leucine ri 98.3 1.4E-06 4.9E-11 81.5 8.6 83 80-166 225-311 (329)
455 3rw6_A Nuclear RNA export fact 98.2 1E-06 3.5E-11 79.2 5.8 82 81-164 141-232 (267)
456 2p1m_B Transport inhibitor res 98.2 7.9E-08 2.7E-12 97.7 -2.4 102 60-162 104-221 (594)
457 3rfe_A Platelet glycoprotein I 98.2 2.1E-06 7.2E-11 68.4 6.4 35 82-116 32-67 (130)
458 1sra_A Sparc; extracellular ma 98.2 3.6E-07 1.2E-11 73.2 1.8 62 372-435 78-140 (151)
459 1sra_A Sparc; extracellular ma 98.2 7.2E-07 2.5E-11 71.5 2.5 63 333-398 76-139 (151)
460 2ra8_A Uncharacterized protein 98.1 1.2E-06 4E-11 83.0 2.8 152 60-220 138-320 (362)
461 3rw6_A Nuclear RNA export fact 98.1 3E-06 1E-10 76.2 4.8 95 61-158 141-257 (267)
462 2p1m_B Transport inhibitor res 98.0 5E-07 1.7E-11 91.8 -1.6 105 59-163 128-246 (594)
463 4fdw_A Leucine rich hypothetic 97.9 1.7E-05 6E-10 76.1 8.2 101 58-164 177-283 (401)
464 3rfe_A Platelet glycoprotein I 97.9 1.1E-05 3.7E-10 64.2 5.4 65 84-175 11-78 (130)
465 1tuz_A Diacylglycerol kinase a 97.9 0.00011 3.9E-09 56.4 10.1 57 310-366 44-109 (118)
466 2ra8_A Uncharacterized protein 97.8 7.2E-06 2.5E-10 77.5 3.4 103 59-164 170-291 (362)
467 1tuz_A Diacylglycerol kinase a 97.8 0.00019 6.4E-09 55.2 10.1 83 349-434 6-104 (118)
468 4fdw_A Leucine rich hypothetic 97.7 7.8E-05 2.7E-09 71.6 8.6 97 62-162 136-236 (401)
469 3e4g_A ATP synthase subunit S, 97.7 4.1E-05 1.4E-09 63.8 5.1 94 70-164 50-151 (176)
470 1nub_A Basement membrane prote 97.6 1.6E-05 5.5E-10 69.4 2.0 61 372-434 156-217 (229)
471 1pgv_A TMD-1, tropomodulin TMD 97.6 5.3E-05 1.8E-09 64.4 4.3 104 60-163 40-168 (197)
472 1nub_A Basement membrane prote 97.5 4.5E-05 1.6E-09 66.5 2.6 62 334-398 155-217 (229)
473 1pgv_A TMD-1, tropomodulin TMD 97.2 0.00028 9.7E-09 59.9 4.7 87 77-163 37-137 (197)
474 3e4g_A ATP synthase subunit S, 96.9 0.00035 1.2E-08 58.2 2.1 82 61-143 61-154 (176)
475 4gt6_A Cell surface protein; l 96.8 0.0064 2.2E-07 58.0 10.4 100 59-163 263-368 (394)
476 4fs7_A Uncharacterized protein 96.7 0.0044 1.5E-07 59.1 8.4 76 80-160 296-374 (394)
477 4h09_A Hypothetical leucine ri 96.5 0.0083 2.9E-07 56.8 8.9 99 60-162 216-320 (379)
478 4fs7_A Uncharacterized protein 96.0 0.0097 3.3E-07 56.7 6.7 95 58-157 294-393 (394)
479 4gt6_A Cell surface protein; l 95.4 0.031 1.1E-06 53.2 7.7 101 57-163 284-389 (394)
480 4h09_A Hypothetical leucine ri 95.4 0.075 2.6E-06 50.1 10.2 85 76-165 212-299 (379)
481 2qpt_A EH domain-containing pr 95.3 0.051 1.7E-06 54.1 9.0 61 370-433 457-517 (550)
482 1pul_A Hypothetical protein C3 94.3 0.28 9.5E-06 37.6 8.6 48 385-433 39-90 (125)
483 2l5y_A Stromal interaction mol 93.3 0.46 1.6E-05 37.7 8.5 77 334-415 15-92 (150)
484 2kav_A Sodium channel protein 93.2 0.068 2.3E-06 41.4 3.6 76 345-436 31-111 (129)
485 2qpt_A EH domain-containing pr 92.9 0.27 9.4E-06 48.8 8.4 63 332-398 456-518 (550)
486 2jrf_A Tubulin polymerization- 92.4 0.51 1.7E-05 38.8 7.8 67 334-400 8-82 (184)
487 1wlm_A Protein CGI-38; structu 92.1 0.55 1.9E-05 37.4 7.5 66 334-399 15-88 (151)
488 2k60_A Protein (stromal intera 91.4 0.18 6.1E-06 40.0 4.0 74 333-411 14-88 (150)
489 2l5y_A Stromal interaction mol 90.9 1.1 3.9E-05 35.5 8.2 58 371-433 15-73 (150)
490 1pul_A Hypothetical protein C3 89.9 2.7 9.4E-05 32.1 9.2 68 333-401 21-94 (125)
491 4fl4_A Glycoside hydrolase fam 89.2 0.61 2.1E-05 33.4 4.8 55 344-399 24-78 (88)
492 4fl4_A Glycoside hydrolase fam 89.1 0.34 1.2E-05 34.7 3.4 52 378-431 21-74 (88)
493 3kev_A Galieria sulfuraria DCU 89.1 4.1 0.00014 34.1 10.6 100 332-433 5-104 (199)
494 2ccl_B Endo-1,4-beta-xylanase 88.9 1.8 6.2E-05 28.7 6.8 53 344-399 6-58 (63)
495 3tdu_A DCN1-like protein 1; E2 88.9 2 6.8E-05 36.1 8.6 101 331-433 1-102 (200)
496 4dck_A Sodium channel protein 88.4 0.47 1.6E-05 38.5 4.2 61 372-435 21-87 (168)
497 3ul4_B Cellulosome enzyme, doc 87.8 1 3.5E-05 30.2 5.0 51 344-398 7-57 (65)
498 4dh2_B Dockerin type 1; cellul 87.7 0.33 1.1E-05 34.4 2.6 55 344-399 9-63 (82)
499 2y3n_B Cellulosomal family-48 87.5 0.95 3.3E-05 31.0 4.8 52 344-400 8-60 (71)
500 2vn6_B Endoglucanase A; cell a 87.5 1.5 5.1E-05 29.3 5.7 50 344-399 6-55 (64)
No 1
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=99.88 E-value=4.5e-22 Score=165.41 Aligned_cols=144 Identities=29% Similarity=0.553 Sum_probs=119.7
Q ss_pred eecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHHHH
Q psy2947 259 FTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEV 336 (441)
Q Consensus 259 ~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 336 (441)
.++++++.+++++|..+|.+ |.| +..|++.+++.++..+ ...++
T Consensus 3 ~lt~eqi~el~~~F~~~D~d~~G~I-~~~El~~~l~~~~~~~---------------------------------~~~~~ 48 (148)
T 2lmt_A 3 ELTEEQIAEFKDAFVQFDKEGTGKI-ATRELGTLMRTLGQNP---------------------------------TEAEL 48 (148)
T ss_dssp SCCSHHHHHHHHHHHHHHCSSCCEE-EGGGHHHHHHHHTCCC---------------------------------CHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeE-CHHHHHHHHHhcCCCc---------------------------------hHHHH
Confidence 35566777777777777664 566 5666666666655433 44556
Q ss_pred HHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHh
Q psy2947 337 VDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREA 416 (441)
Q Consensus 337 ~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~ 416 (441)
..++..+|.+++|.|++.||...+..........+.++.+|+.+|.|++|+|+.+||++++..+|.++++++++.+++.+
T Consensus 49 ~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~ 128 (148)
T 2lmt_A 49 QDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREA 128 (148)
T ss_dssp HHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHh
Confidence 66677789999999999999998887766666678899999999999999999999999999999999999999999999
Q ss_pred CCCCCCceeHHHHHHHHhcc
Q psy2947 417 NVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 417 d~d~dg~i~~~ef~~~l~~~ 436 (441)
|.|+||.|+|+||+++|.++
T Consensus 129 D~d~dG~I~~~EF~~~m~~K 148 (148)
T 2lmt_A 129 DFDGDGMINYEEFVWMISQK 148 (148)
T ss_dssp CCSCCSSEEHHHHHHHHTTC
T ss_pred CCCCCCeEeHHHHHHHHhcC
Confidence 99999999999999999864
No 2
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=99.87 E-value=8.4e-22 Score=168.51 Aligned_cols=144 Identities=34% Similarity=0.568 Sum_probs=123.5
Q ss_pred ceecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHHH
Q psy2947 258 VFTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKE 335 (441)
Q Consensus 258 ~~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 335 (441)
..++++++.+++++|..+|.+ |.| +.+|++.+++.++..++..+
T Consensus 3 ~~Lt~eqi~elk~~F~~~D~d~dG~I-~~~El~~~l~~lg~~~~~~~--------------------------------- 48 (176)
T 2lhi_A 3 SNLTEEQIAEFKEAFALFDKDNNGSI-SSSELATVMRSLGLSPSEAE--------------------------------- 48 (176)
T ss_dssp CCCCTTGGGHHHHHHHTTCSSCSSCB-CHHHHHHHHHHHTCCCCHHH---------------------------------
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHHcCCChhHHH---------------------------------
Confidence 356788999999999999976 788 89999999988886554444
Q ss_pred HHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q psy2947 336 VVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFRE 415 (441)
Q Consensus 336 ~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~ 415 (441)
+..++..+|.+++|.|++.||..++..........+.+..+|+.||.|++|+|+.+||++++..+|.++++++++++++.
T Consensus 49 ~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~ 128 (176)
T 2lhi_A 49 VNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLRE 128 (176)
T ss_dssp HHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHHHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHh
Confidence 44555568999999999999998887665444456789999999999999999999999999999999999999999999
Q ss_pred hCCCCCCceeHHHHHHHHhcc
Q psy2947 416 ANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 416 ~d~d~dg~i~~~ef~~~l~~~ 436 (441)
+| |+||.|+|+||+++|.+.
T Consensus 129 ~d-d~dG~I~~~EF~~~m~k~ 148 (176)
T 2lhi_A 129 VS-DGSGEINIQQFAALLSKG 148 (176)
T ss_dssp HH-TTSSCBCTTHHHHHHTCC
T ss_pred hc-CCCCeEeHHHHHHHHHhc
Confidence 99 999999999999999764
No 3
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.87 E-value=4.4e-23 Score=193.72 Aligned_cols=153 Identities=19% Similarity=0.284 Sum_probs=116.0
Q ss_pred CCCCccCeeEEeeccccCCCCCcCCCCCCCCCCCcCCCCCcc-CCCCccCCC--------------------CCC---CC
Q psy2947 4 PAKNNEGFQATRNKQGVGFSRRSSFKNKNSTPQTACQRNCSL-EVGGICSHI--------------------WIP---QY 59 (441)
Q Consensus 4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~c~~-~~~~~c~~~--------------------~~~---~~ 59 (441)
.+.+.|..||++||+++..+ . .+.+|.... .| |.| |.|+.|... .+| ..
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~-~-~l~~W~~~~--~~---C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~ 74 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNP-T-TLSSWLPTT--DC---CNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLAN 74 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCC-G-GGTTCCTTS--CT---TTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGG
T ss_pred CCCHHHHHHHHHHHHhcCCc-c-cccCCCCCC--CC---CcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhC
Confidence 56788999999999999644 3 567786532 23 443 578888632 122 24
Q ss_pred CCcccEEeccC-C----CcCcccCCCCCCCEEEccCCCCC-cCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCE
Q psy2947 60 FSHAFLLSLSY-T----PIGRRIFKCDTVEVLSLKSNSLT-SLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTH 133 (441)
Q Consensus 60 l~~L~~l~l~~-n----~i~~~~~~l~~L~~L~l~~n~l~-~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~ 133 (441)
+++|+.|++++ | .+|..+..+++|++|+|++|.++ .+|..|..+++|++|++++|.++ +.+|..+..+++|++
T Consensus 75 l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~ 153 (313)
T 1ogq_A 75 LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALS-GTLPPSISSLPNLVG 153 (313)
T ss_dssp CTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEE-SCCCGGGGGCTTCCE
T ss_pred CCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccC-CcCChHHhcCCCCCe
Confidence 67788888874 5 56777788888888888888887 77777888888888888888887 678888888888888
Q ss_pred EEccCCCCC-ccchhhcCCC-CCCEEEccCCcC
Q psy2947 134 LYLDNNLLD-ALPGFLLSMP-QLDTVYRHGNHN 164 (441)
Q Consensus 134 L~l~~n~l~-~lp~~~~~l~-~L~~L~l~~N~~ 164 (441)
|++++|+++ .+|..++.++ +|+.|++++|.+
T Consensus 154 L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l 186 (313)
T 1ogq_A 154 ITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186 (313)
T ss_dssp EECCSSCCEEECCGGGGCCCTTCCEEECCSSEE
T ss_pred EECcCCcccCcCCHHHhhhhhcCcEEECcCCee
Confidence 888888885 7787888877 788888888875
No 4
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=99.86 E-value=1.7e-21 Score=163.68 Aligned_cols=147 Identities=24% Similarity=0.438 Sum_probs=120.9
Q ss_pred eecccchHHHHHhhhcccc----CCCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHH
Q psy2947 259 FTFKTPYLEFRECFFLFAR----NGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPK 334 (441)
Q Consensus 259 ~l~~~~~~~l~~~f~~~d~----~G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~ 334 (441)
+++++++.+++++|..+|. +|.| +..+++.+++.+|..++..++..+..
T Consensus 2 qLt~eqi~elre~F~~fD~~~d~dG~I-~~~El~~~lr~lG~~~t~~el~~~~~-------------------------- 54 (159)
T 3i5g_C 2 QLTKDEIEEVREVFDLFDFWDGRDGDV-DAAKVGDLLRCLGMNPTEAQVHQHGG-------------------------- 54 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSCE-EGGGHHHHHHHTTCCCCHHHHHTTTC--------------------------
T ss_pred CCCHHHHHHHHHHHHHHCcCCCCCCeE-CHHHHHHHHHHcCCCCCHHHHHHHHc--------------------------
Confidence 4678899999999999883 4899 78999999999998887776655431
Q ss_pred HHHHHHHhhcCCCCCcccHHHHHHHHHhhcc--CCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHH
Q psy2947 335 EVVDAFKAADTTKSGKLSFPDFLKVMHTHSK--AEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQI 412 (441)
Q Consensus 335 ~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~--~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l 412 (441)
.|.+++|.|+++||..++..... .....++++.+|+.||++++|+|+.+||+++|..+|.++++++++.+
T Consensus 55 --------~d~~~~g~i~f~eFl~~~~~~~~~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l 126 (159)
T 3i5g_C 55 --------TKKMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDI 126 (159)
T ss_dssp --------CSSTTSCEECHHHHHHHHHHHTTCCTTCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHH
T ss_pred --------ccccCCCcccHHHHHHHHHHhhcccccchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHH
Confidence 35567778888888777765432 22335789999999999999999999999999999999999999999
Q ss_pred HHHhCC--CCCCceeHHHHHHHHh-ccCCCC
Q psy2947 413 FREANV--TMNSKVRYEDFVKIAC-APVPDY 440 (441)
Q Consensus 413 ~~~~d~--d~dg~i~~~ef~~~l~-~~~~~~ 440 (441)
++.+|. |++|.|+|+||+++|. .++|+.
T Consensus 127 ~~~~D~~~d~dG~I~~~EF~~~m~~~p~pd~ 157 (159)
T 3i5g_C 127 FTFCDIREDIDGNIKYEDLMKKVMAGPFPDK 157 (159)
T ss_dssp HHHTTCCCCSSCCEEHHHHHHHHHHCSCCC-
T ss_pred HHHhCcCCCCCCeEeHHHHHHHHHCCCCCCC
Confidence 999995 8899999999998775 568764
No 5
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=99.86 E-value=2.5e-21 Score=181.38 Aligned_cols=144 Identities=38% Similarity=0.653 Sum_probs=119.9
Q ss_pred eecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHHHH
Q psy2947 259 FTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEV 336 (441)
Q Consensus 259 ~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 336 (441)
.++++++++++++|..+|.+ |.| +.+|++.+++.++..++ .+++
T Consensus 295 ~Lt~EEI~ELREaF~~fDkDgdG~I-S~eELk~aLrsLG~~~T---------------------------------eeEI 340 (440)
T 3u0k_A 295 QLTEEQIAEFKEAFSLFDKDGDGTI-TTKELGTVMRSLGQNPT---------------------------------EAEL 340 (440)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEE-CHHHHHHHHHHTTCCCC---------------------------------HHHH
T ss_pred hhhHHHHHHHHHHHHHHcCCCCCEE-CHHHHHHHHHHcCCCCC---------------------------------HHHH
Confidence 45678888999999888876 778 78888888888775443 4455
Q ss_pred HHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHh
Q psy2947 337 VDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREA 416 (441)
Q Consensus 337 ~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~ 416 (441)
..+|+.+|.|++|.|+++||..++.........+++++.+|+.+|.|++|+|+.+||++++..+|..+++++++++|+.+
T Consensus 341 ~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~ 420 (440)
T 3u0k_A 341 QDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 420 (440)
T ss_dssp HHHHHHHCSSCSSSEEHHHHHHHHHTC------CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 56667799999999999999998876655555568899999999999999999999999999999999999999999999
Q ss_pred CCCCCCceeHHHHHHHHhcc
Q psy2947 417 NVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 417 d~d~dg~i~~~ef~~~l~~~ 436 (441)
|.|+||.|+|+||+++|.++
T Consensus 421 D~DgDGkIsyeEFvkmMtSK 440 (440)
T 3u0k_A 421 DIDGDGQVNYEEFVQMMTAK 440 (440)
T ss_dssp CTTCSSSEEHHHHHHHHC--
T ss_pred CCCCCCcEeHHHHHHHhCCC
Confidence 99999999999999999753
No 6
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=99.85 E-value=4.7e-21 Score=158.27 Aligned_cols=125 Identities=26% Similarity=0.448 Sum_probs=98.1
Q ss_pred hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcc
Q psy2947 309 EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTV 388 (441)
Q Consensus 309 ~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~i 388 (441)
+++|.|+.+||..++.... ...+.+++..+|+.+|.|++|.|+++||..++..........+.++.+|+.+|+|++|+|
T Consensus 18 d~~G~I~~~el~~~l~~~g-~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I 96 (143)
T 2obh_A 18 DGTGTIDVKELKVAMRALG-FEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKI 96 (143)
T ss_dssp TCCSEEEGGGHHHHHHHTT-CCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSB
T ss_pred CCCCcCcHHHHHHHHHHcC-CCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHHHHHHHHhCCCCCCcC
Confidence 3344444444444443321 224556677777889999999999999998876543222224678899999999999999
Q ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 389 PAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 389 s~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
+.+||++++..+|..+++++++.+++.+|.|+||.|+|+||+.+|.
T Consensus 97 ~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 97 SFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp CHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999875
No 7
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=99.85 E-value=6.6e-20 Score=159.18 Aligned_cols=155 Identities=16% Similarity=0.280 Sum_probs=137.1
Q ss_pred hHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCCCHHHHHH
Q psy2947 265 YLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIPKEVVD 338 (441)
Q Consensus 265 ~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 338 (441)
..+++++|..+|.+ |.| +.+|+..++...+..++..++..++. +++|.|+++||..++... ..++.
T Consensus 26 ~~~l~~~F~~~D~d~~G~I-~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~-------~~~~~ 97 (191)
T 1y1x_A 26 NQELMEWFRAVDTDGSGAI-SVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI-------LSMRE 97 (191)
T ss_dssp TSCHHHHHHHHCTTCSSSB-CHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH-------HHHHH
T ss_pred HHHHHHHHHHHcCCCCCcC-cHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH-------HHHHH
Confidence 56788999999976 889 89999999977777788888887775 689999999999998753 67999
Q ss_pred HHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCC
Q psy2947 339 AFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANV 418 (441)
Q Consensus 339 ~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~ 418 (441)
+|+.+|.|++|.|+.+||..++... +.....+++..+|+.+|.|++|.|+++||..++... ..+..+|+.+|.
T Consensus 98 ~F~~~D~d~~G~i~~~e~~~~l~~~-g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~ 170 (191)
T 1y1x_A 98 GFRKRDSSGDGRLDSNEVRAALLSS-GYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV------CRVRNVFAFYDR 170 (191)
T ss_dssp HHHHHCTTSSSCBCHHHHHHHHHTT-SCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCT
T ss_pred HHHHhCCCCCCeEcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH------HHHHHHHHHhCc
Confidence 9999999999999999999999876 345567899999999999999999999999999864 678899999999
Q ss_pred CCCCc--eeHHHHHHHHh
Q psy2947 419 TMNSK--VRYEDFVKIAC 434 (441)
Q Consensus 419 d~dg~--i~~~ef~~~l~ 434 (441)
|++|. ++++||+.++.
T Consensus 171 d~dG~i~~~~~eF~~~~~ 188 (191)
T 1y1x_A 171 ERTGQVTFTFDTFIGGSV 188 (191)
T ss_dssp TCCSEEEEEHHHHHHHHH
T ss_pred CCCceEEeeHHHHHHHHH
Confidence 99999 78999999875
No 8
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.85 E-value=6.3e-23 Score=193.84 Aligned_cols=200 Identities=13% Similarity=0.110 Sum_probs=95.7
Q ss_pred CCCCccCeeEEeeccccCCCCCcCCCCCCCCCCCcCCCCCccCCCCccCCCCC---CCCCCcccEEeccCC---CcCccc
Q psy2947 4 PAKNNEGFQATRNKQGVGFSRRSSFKNKNSTPQTACQRNCSLEVGGICSHIWI---PQYFSHAFLLSLSYT---PIGRRI 77 (441)
Q Consensus 4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~c~~~~~~~c~~~~~---~~~l~~L~~l~l~~n---~i~~~~ 77 (441)
++.++|..||++||.++..++......|.... ...+..|+ |.|+.|..... .....+++.|+|++| .+|..+
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~-~~~~~~~~-~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~~lp~~l 100 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQAN-SNNPQIET-RTGRALKATADLLEDATQPGRVALELRSVPLPQFPDQA 100 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHT-TTCTTSCC-SHHHHHHHHHHHHHHHTSTTCCEEEEESSCCSSCCSCG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccc-cccccccc-cCCcchhhhHHHHhcccccceeEEEccCCCchhcChhh
Confidence 45578889999999998777765555673110 00111243 35666642100 001234455555554 334444
Q ss_pred CCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEccCCCC-CccchhhcC------
Q psy2947 78 FKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLL-DALPGFLLS------ 150 (441)
Q Consensus 78 ~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l-~~lp~~~~~------ 150 (441)
+.+++|++|+|++|.++.+|..++.+++|++|++++|.++ .+|..+..+++|++|++++|++ +.+|..+..
T Consensus 101 ~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~--~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLR--ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCC--CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccc--cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 4455555555555555555554555555555555555554 4455555555555555554332 344433322
Q ss_pred ---CCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhcccccccc
Q psy2947 151 ---MPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIASKEN 217 (441)
Q Consensus 151 ---l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~l~~n 217 (441)
+++|+.|++++|.+. .+|..+..++.+..+ +.+|.+..+|+.+..++.|+.|++++|
T Consensus 179 ~~~l~~L~~L~L~~n~l~----------~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n 239 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIR----------SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGC 239 (328)
T ss_dssp EEESTTCCEEEEEEECCC----------CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTC
T ss_pred hccCCCCCEEECcCCCcC----------cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCC
Confidence 444555555554431 223333333333333 444444444444444444444444443
No 9
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=99.84 E-value=9.2e-21 Score=158.06 Aligned_cols=141 Identities=28% Similarity=0.493 Sum_probs=121.4
Q ss_pred ceecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHHH
Q psy2947 258 VFTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKE 335 (441)
Q Consensus 258 ~~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 335 (441)
..++++++.+++++|..+|.+ |.| +..+++.+++.++..++..++..++.+.+|.|++++|..++...
T Consensus 8 ~~Lt~~qi~elk~~F~~~D~d~dG~I-~~~El~~~l~~lg~~~~~~~~~~~~~~~~~~i~f~ef~~~~~~~--------- 77 (153)
T 3i5g_B 8 VKLSQRQMQELKEAFTMIDQDRDGFI-GMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAFLTLFGEK--------- 77 (153)
T ss_dssp TTCCHHHHHHHHHHHHHHCCSTTSCC-CHHHHHHHHHHTTSCCCHHHHHHHHHTSSSCCCSHHHHHTTTTT---------
T ss_pred cCCCHHHHHHHHHHHHHHCCCCCCeE-cHHHHHHHHHHcCCCccHHHHHHHHHhccCCccHHHHHHHHHhh---------
Confidence 457899999999999999986 889 89999999999999999999888887777777777777666433
Q ss_pred HHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q psy2947 336 VVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFRE 415 (441)
Q Consensus 336 ~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~ 415 (441)
.......+.++.+|+.||.|++|+|+.+||+++|..+|.++++++++.+++.
T Consensus 78 ----------------------------~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~ 129 (153)
T 3i5g_B 78 ----------------------------VSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKD 129 (153)
T ss_dssp ----------------------------TTTCCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTT
T ss_pred ----------------------------hcccccHHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHH
Confidence 1222335678899999999999999999999999999999999999999999
Q ss_pred hCCCCCCceeHHHHHHHHhccC
Q psy2947 416 ANVTMNSKVRYEDFVKIACAPV 437 (441)
Q Consensus 416 ~d~d~dg~i~~~ef~~~l~~~~ 437 (441)
+|.+ ||.|+|+||+++|.+.-
T Consensus 130 ~D~~-dG~I~y~EF~~~m~~~~ 150 (153)
T 3i5g_B 130 APLK-NKQFNYNKMVDIKGKAE 150 (153)
T ss_dssp CCEE-TTEECHHHHHHHHHCSC
T ss_pred hCCC-cCEEcHHHHHHHhcCCC
Confidence 9987 99999999999998653
No 10
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=99.84 E-value=1.9e-20 Score=155.48 Aligned_cols=126 Identities=30% Similarity=0.585 Sum_probs=100.3
Q ss_pred hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcc
Q psy2947 309 EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTV 388 (441)
Q Consensus 309 ~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~i 388 (441)
+++|.|+.+||..++.... ...+..++..+|+.+|.|++|.|+++||..++..........+.+..+|+.+|++++|.|
T Consensus 22 d~~G~i~~~el~~~l~~~g-~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I 100 (148)
T 1exr_A 22 DGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLI 100 (148)
T ss_dssp TCSSEECHHHHHHHHHHHT-CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCSSCB
T ss_pred CCCCcCcHHHHHHHHHHcC-CCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcHHHHHHHHHHhCCCCCCcC
Confidence 3444444444444444331 224556677788889999999999999998876543222234678899999999999999
Q ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 389 PAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 389 s~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+.+||++++..+|.++++++++.+++.+|.|++|.|+|+||+++|..
T Consensus 101 ~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1exr_A 101 SAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVS 147 (148)
T ss_dssp CHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHHC
T ss_pred CHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHcc
Confidence 99999999999999999999999999999999999999999999864
No 11
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=99.84 E-value=1.3e-19 Score=159.44 Aligned_cols=155 Identities=15% Similarity=0.275 Sum_probs=132.6
Q ss_pred cCCCccCHHHHHHHHHHcCCCcCHHHHHHHHH----h-CCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcc
Q psy2947 277 RNGTIKTLDELSVIMRSLGMSPTIAELKKYLA----E-KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKL 351 (441)
Q Consensus 277 ~~G~i~~~~el~~~~~~~~~~~~~~~~~~~~~----~-~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i 351 (441)
.+|.+ +.++++.+++.++ ++..++..++. + ++|.|+++||..++........+...+..+|+.+|.|++|.|
T Consensus 12 ~~g~l-~~~el~~~~~~~~--~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i 88 (207)
T 2d8n_A 12 KSGAL-SKEILEELQLNTK--FSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTL 88 (207)
T ss_dssp CTTCC-CHHHHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEE
T ss_pred cCCCC-CHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeE
Confidence 34788 8999999999877 46666666553 5 799999999999999876555678899999999999999999
Q ss_pred cHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh----C----CCCCH------HHHHHHHHHhC
Q psy2947 352 SFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW----G----EGLSS------KEVDQIFREAN 417 (441)
Q Consensus 352 ~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~----~----~~l~~------~~~~~l~~~~d 417 (441)
+++||..++..... ....+.++.+|+.+|.|++|.|+++||++++..+ | .++++ ++++.+|+.+|
T Consensus 89 ~~~Ef~~~~~~~~~-~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~D 167 (207)
T 2d8n_A 89 DFKEYVIALHMTTA-GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFG 167 (207)
T ss_dssp EHHHHHHHHHHHSC-SSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTT
T ss_pred eHHHHHHHHHHHcC-CCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHHHcC
Confidence 99999999987643 3446789999999999999999999999999986 6 55553 67999999999
Q ss_pred CCCCCceeHHHHHHHHhc
Q psy2947 418 VTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 418 ~d~dg~i~~~ef~~~l~~ 435 (441)
.|++|.|+|+||++++.+
T Consensus 168 ~d~dG~I~~~Ef~~~~~~ 185 (207)
T 2d8n_A 168 KNDDDKLTEKEFIEGTLA 185 (207)
T ss_dssp CCTTCCEEHHHHHHHHHH
T ss_pred CCCCCcCcHHHHHHHHHh
Confidence 999999999999999864
No 12
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=99.83 E-value=1.3e-19 Score=154.41 Aligned_cols=159 Identities=13% Similarity=0.182 Sum_probs=137.7
Q ss_pred cchHHHHHhhhccccC--CCccCHHHHHHHHHHcC-CCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCCCHHH
Q psy2947 263 TPYLEFRECFFLFARN--GTIKTLDELSVIMRSLG-MSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIPKE 335 (441)
Q Consensus 263 ~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~-~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~~~~~ 335 (441)
.+..+++++|..+|.+ |.| +.+|+..+++.++ ..++..++..++. +++|.|+++||..++... ..
T Consensus 4 ~~~~~l~~~F~~~D~d~~G~i-~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~~-------~~ 75 (172)
T 2znd_A 4 PDQSFLWNVFQRVDKDRSGVI-SDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI-------TD 75 (172)
T ss_dssp --CHHHHHHHHHHCTTCSSCE-EHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHHH-------HH
T ss_pred cchhHHHHHHHHhCCCCCCcC-cHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------HH
Confidence 3567899999999976 888 8999999999887 6678888877664 688999999999998753 67
Q ss_pred HHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q psy2947 336 VVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFRE 415 (441)
Q Consensus 336 ~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~ 415 (441)
++.+|+.+|.|++|.|+.+||..++... +.....+.+..+|+.+|.+++|.|+++||..++... +.+..+|+.
T Consensus 76 ~~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~~~~F~~ 148 (172)
T 2znd_A 76 WQNVFRTYDRDNSGMIDKNELKQALSGF-GYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL------QRLTDIFRR 148 (172)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHHHHT-TCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH------HHHHHHHHH
T ss_pred HHHHHHHHCCCCCCccCHHHHHHHHHHc-CCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH------HHHHHHHHH
Confidence 9999999999999999999999999876 344567889999999999999999999999999865 678999999
Q ss_pred hCCCCCCcee--HHHHHHHHhcc
Q psy2947 416 ANVTMNSKVR--YEDFVKIACAP 436 (441)
Q Consensus 416 ~d~d~dg~i~--~~ef~~~l~~~ 436 (441)
+|.|++|.|+ ++||+.++...
T Consensus 149 ~D~d~dG~i~~~~~ef~~~~~~~ 171 (172)
T 2znd_A 149 YDTDQDGWIQVSYEQYLSMVFSI 171 (172)
T ss_dssp HCTTSSSCCCCCHHHHHHHHHTC
T ss_pred hCCCCCCeEeeeHHHHHHHHHhc
Confidence 9999999995 89999887653
No 13
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=99.83 E-value=1.4e-19 Score=152.39 Aligned_cols=144 Identities=25% Similarity=0.395 Sum_probs=118.8
Q ss_pred ceecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHHH
Q psy2947 258 VFTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKE 335 (441)
Q Consensus 258 ~~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 335 (441)
..+++.++..++++|..+|.+ |.| +.+++..+++.++.. .+.+.
T Consensus 15 ~~l~~~~~~~l~~~F~~~D~~~~G~i-~~~e~~~~l~~~~~~---------------------------------~~~~~ 60 (161)
T 3fwb_A 15 SELLEEQKQEIYEAFSLFDMNNDGFL-DYHELKVAMKALGFE---------------------------------LPKRE 60 (161)
T ss_dssp TTSCHHHHHHHHHHHHHHCTTSSSEE-CHHHHHHHHHHTTCC---------------------------------CCHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcC-cHHHHHHHHHHcCCC---------------------------------CCHHH
Confidence 345566777777777777654 566 666666666665432 44566
Q ss_pred HHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q psy2947 336 VVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFRE 415 (441)
Q Consensus 336 ~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~ 415 (441)
+..+|+.+|.+++|.|+++||..++..........+.++.+|+.+|.+++|.|+.+||++++..+|..+++++++.+++.
T Consensus 61 ~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~ 140 (161)
T 3fwb_A 61 ILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEE 140 (161)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHT
T ss_pred HHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 77788889999999999999999887654555556789999999999999999999999999999999999999999999
Q ss_pred hCCCCCCceeHHHHHHHHhc
Q psy2947 416 ANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 416 ~d~d~dg~i~~~ef~~~l~~ 435 (441)
+|.|++|.|+|+||+.++.+
T Consensus 141 ~d~~~~g~i~~~eF~~~~~~ 160 (161)
T 3fwb_A 141 FDLDGDGEINENEFIAICTD 160 (161)
T ss_dssp TCSSSSSSEEHHHHHHHHHH
T ss_pred hCCCCCCcCcHHHHHHHHhc
Confidence 99999999999999999865
No 14
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.82 E-value=1.6e-19 Score=148.71 Aligned_cols=125 Identities=25% Similarity=0.466 Sum_probs=107.2
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCc
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGT 387 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~ 387 (441)
.+++|.|+.+||..++... ....+...+..+|+.+|.|++|.|+++||..++..........+.++.+|+.+|++++|.
T Consensus 17 ~d~~G~i~~~el~~~l~~~-~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~ 95 (142)
T 2bl0_C 17 SERTGFITKEGLQTVLKQF-GVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGY 95 (142)
T ss_dssp TTCSSEEEHHHHHHHHHHH-TCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHHHHTCCSSCSC
T ss_pred CCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCCCc
Confidence 4566667777776666654 234566778889999999999999999999998875445556788999999999999999
Q ss_pred ccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 388 VPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 388 is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
|+.+||+.++..+|.++++++++.+++.+| |++|.|+|+||+++|.
T Consensus 96 i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 141 (142)
T 2bl0_C 96 IPKAALQDALLNLGDRLKPHEFAEFLGITE-TEKGQIRYDNFINTMF 141 (142)
T ss_dssp EEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred CcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence 999999999999999999999999999999 9999999999998764
No 15
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=99.82 E-value=1.3e-19 Score=160.85 Aligned_cols=163 Identities=11% Similarity=0.125 Sum_probs=142.8
Q ss_pred cceecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCC
Q psy2947 257 KVFTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAE 330 (441)
Q Consensus 257 ~~~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~ 330 (441)
...++.++...+++.|..+|.+ |.| +.+|+..+++.++..++..++..++. +++|.|+++||..++...
T Consensus 42 ~~~l~~~e~~~l~~~F~~~D~d~~G~I-~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~---- 116 (220)
T 3sjs_A 42 LNTIPLDQYTRIYQWFMGVDRDRSGTL-EINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM---- 116 (220)
T ss_dssp GGGCCHHHHHHHHHHHHHHCTTCCSSB-CHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH----
T ss_pred HhcCCHHHHHHHHHHHHHhCCCCCCcC-cHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH----
Confidence 4457788999999999999986 889 89999999999998888888887774 689999999999999864
Q ss_pred CCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHH
Q psy2947 331 DIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVD 410 (441)
Q Consensus 331 ~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~ 410 (441)
+.++.+|+.+|.|++|.|+.+||.+++... +.....++++.+|+.+| |++|.|+++||.+++..+ ..+.
T Consensus 117 ---~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~l------~~~~ 185 (220)
T 3sjs_A 117 ---ELAYNLFVMNARARSGTLEPHEILPALQQL-GFYINQRTSLLLHRLFA-RGMAFCDLNCWIAICAFA------AQTR 185 (220)
T ss_dssp ---HHHHHHHHHHCCSSTTEECHHHHHHHHHHH-TCCCCHHHHHHHHHHHC---CCSEEHHHHHHHHHHH------HHHH
T ss_pred ---HHHHHHHHHHCCCCCCCCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH------HHHH
Confidence 679999999999999999999999999877 34556788999999999 999999999999999875 3688
Q ss_pred HHHHHh-CCCCCC------ceeHHHHHHHHhc
Q psy2947 411 QIFREA-NVTMNS------KVRYEDFVKIACA 435 (441)
Q Consensus 411 ~l~~~~-d~d~dg------~i~~~ef~~~l~~ 435 (441)
.+|+.+ |.+++| .|+|+||+.++..
T Consensus 186 ~~F~~~~D~~~~G~i~~~~~i~~~ef~~~~~~ 217 (220)
T 3sjs_A 186 SAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTS 217 (220)
T ss_dssp HHHHHHHTSGGGCSCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHhcccCCCCCcccccceeHHHHHHHHHH
Confidence 999999 999999 8999999988764
No 16
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=99.82 E-value=1.7e-19 Score=153.11 Aligned_cols=127 Identities=24% Similarity=0.424 Sum_probs=101.1
Q ss_pred hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcc
Q psy2947 309 EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTV 388 (441)
Q Consensus 309 ~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~i 388 (441)
+++|.|+.+||..++... +...+...+..+|+.+|.|++|.|+++||..++..........+.+..+|+.+|.+++|.|
T Consensus 40 d~~G~i~~~el~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i 118 (169)
T 3qrx_A 40 DGSGTIDAKELKVAMRAL-GFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTI 118 (169)
T ss_dssp TCCSEECHHHHHHHHHHT-SCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSB
T ss_pred CCCCcCcHHHHHHHHHHc-CCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHHHHhCCCCCCcC
Confidence 344444444444444333 2234566778888889999999999999999887643322234678899999999999999
Q ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhcc
Q psy2947 389 PAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 389 s~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~ 436 (441)
+.+||+.++..+|..+++++++.+|+.+|.|++|.|+|+||+.++.+.
T Consensus 119 ~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 166 (169)
T 3qrx_A 119 TIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKT 166 (169)
T ss_dssp CHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC--
T ss_pred CHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999998754
No 17
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=99.82 E-value=2e-19 Score=150.92 Aligned_cols=143 Identities=19% Similarity=0.371 Sum_probs=117.3
Q ss_pred ecccchHHHHHhhhccc-cC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHHHH
Q psy2947 260 TFKTPYLEFRECFFLFA-RN--GTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEV 336 (441)
Q Consensus 260 l~~~~~~~l~~~f~~~d-~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 336 (441)
+++.++..++++|..+| .+ |.| +.+++..+++.++.. .+...+
T Consensus 7 l~~~~~~~l~~~F~~~D~~~~~G~i-~~~e~~~~l~~~~~~---------------------------------~~~~~~ 52 (158)
T 2jnf_A 7 LSSNQVKLLETAFRDFETPEGSGRV-STDQIGIILEVLGIQ---------------------------------QTKSTI 52 (158)
T ss_dssp SCHHHHHHHHHHHHHSBCSSSCSSE-EHHHHHHHHHHTTCS---------------------------------CSHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcC-cHHHHHHHHHHhCCC---------------------------------CCHHHH
Confidence 44566677777777777 54 666 667776666665533 345567
Q ss_pred HHHHHhhcCCCCCcccHHHHHHHHHhhccCC----CChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHH
Q psy2947 337 VDAFKAADTTKSGKLSFPDFLKVMHTHSKAE----DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQI 412 (441)
Q Consensus 337 ~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~----~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l 412 (441)
..+|+.+|.+++|.|+++||..++....... ...+.++.+|+.+|++++|.|+.+||+.++..+|.++++++++.+
T Consensus 53 ~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~ 132 (158)
T 2jnf_A 53 RQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAM 132 (158)
T ss_dssp HHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHH
Confidence 7778889999999999999999888765433 445679999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCceeHHHHHHHHhcc
Q psy2947 413 FREANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 413 ~~~~d~d~dg~i~~~ef~~~l~~~ 436 (441)
++.+|.|++|.|+|+||++++.+.
T Consensus 133 ~~~~D~d~dg~i~~~eF~~~~~~~ 156 (158)
T 2jnf_A 133 IDEIDADGSGTVDFEEFMGVMTGG 156 (158)
T ss_dssp HHHHCSSCCSEECSHHHHHHTSSC
T ss_pred HHHhCCCCCCcEeHHHHHHHHhcc
Confidence 999999999999999999998764
No 18
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=99.81 E-value=3.1e-19 Score=147.70 Aligned_cols=126 Identities=28% Similarity=0.471 Sum_probs=103.9
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCc
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGT 387 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~ 387 (441)
.+++|.|+.+||..++... ....+...+..+|+.+|.+++|.|+++||..++..........+.+..+|+.+|.+++|.
T Consensus 22 ~~~~G~i~~~e~~~~l~~~-~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~ 100 (147)
T 4ds7_A 22 KDNSGSISASELATVMRSL-GLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGL 100 (147)
T ss_dssp TTCSSEEEHHHHHHHHHHT-TCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHHHHHCTTCSSE
T ss_pred CCCCCCcCHHHHHHHHHHh-CCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHHHHhCCCCCCe
Confidence 3455555555555555443 223566778888899999999999999999988765443344578899999999999999
Q ss_pred ccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 388 VPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 388 is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
|+.+||++++..+|.++++++++.+++.+| |++|.|+|+||++++.+
T Consensus 101 i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~k 147 (147)
T 4ds7_A 101 ISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLSK 147 (147)
T ss_dssp ECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTTC
T ss_pred ECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHhC
Confidence 999999999999999999999999999999 99999999999998864
No 19
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=99.81 E-value=4.2e-19 Score=147.87 Aligned_cols=127 Identities=23% Similarity=0.436 Sum_probs=104.8
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCC----ChHHHHHHHHHhCCC
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAED----IPKEVVDAFKAADTT 383 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~----~~~~~~~~f~~~D~~ 383 (441)
.+++|.|+.+||..++.... ...+...+..+|+.+|.+++|.|+++||..++........ ..+.++.+|+.+|.+
T Consensus 22 ~d~~G~i~~~el~~~l~~~~-~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d 100 (153)
T 3ox6_A 22 KDKDGYINCRDLGNCMRTMG-YMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTN 100 (153)
T ss_dssp HHCSSSCCHHHHHHHHHHTT-CCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHHHHHHHHHHHCTT
T ss_pred CCCCCcCcHHHHHHHHHHcC-CCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCC
Confidence 45566666666666655442 2356677888888999999999999999998876533322 146789999999999
Q ss_pred CCCcccHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 384 KSGTVPAKYLKHVLVN-WGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 384 ~~G~is~~ef~~~l~~-~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
++|.|+.+||++++.. .|.++++++++.+++.+|.|++|.|+|+||+.++.+
T Consensus 101 ~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~k 153 (153)
T 3ox6_A 101 GDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153 (153)
T ss_dssp CSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTCC
T ss_pred CCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhC
Confidence 9999999999999999 899999999999999999999999999999998864
No 20
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=99.81 E-value=9.9e-20 Score=170.70 Aligned_cols=169 Identities=20% Similarity=0.254 Sum_probs=141.4
Q ss_pred ceecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHH----------------------------
Q psy2947 258 VFTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYL---------------------------- 307 (441)
Q Consensus 258 ~~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~---------------------------- 307 (441)
..+++.++..+...|..+|.+ |.| +..++..++..++..++..++..++
T Consensus 114 ~~Ls~~e~~~l~~~F~~~D~d~dG~I-s~~El~~~L~~lg~~~~~~~i~~l~~~~D~d~~G~I~f~ef~~l~~~~~~l~~ 192 (323)
T 1ij5_A 114 PMLSEEDTNILRQLFLSSAVSGSGKF-SFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVA 192 (323)
T ss_dssp CCCCHHHHHHHHHHHTSSSSTTSSCC-CHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHTSCC
T ss_pred HhCCHHHHHHHHHHHHHHhCCCCCCC-cHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHhhhhHHHHHHH
Confidence 456788899999999999976 889 8999999999887666544443332
Q ss_pred ------HhCCCcccHHHHHHHHHhhcCCCCCHHHHHH-HHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHh
Q psy2947 308 ------AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVD-AFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAA 380 (441)
Q Consensus 308 ------~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~-~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~ 380 (441)
.+++|.|+.+||..++ .+...+...+.. +|+.+|.|++|.|+++||..++.... .+..+|+.+
T Consensus 193 ~F~~~D~d~dG~Is~~El~~~l---~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~-------~l~~~F~~~ 262 (323)
T 1ij5_A 193 DFRKIDTNSNGTLSRKEFREHF---VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL-------VLRILYAFA 262 (323)
T ss_dssp CHHHHCTTCCSEECHHHHHHHH---HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH-------HHHHHHHHT
T ss_pred HHHHHCCCCCCcCcHHHHHHHH---cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH-------HHHHHHHHh
Confidence 2466777777777777 223455677888 99999999999999999999887662 788999999
Q ss_pred CCCCCCcccHHHHHHHH-HHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhccC
Q psy2947 381 DTTKSGTVPAKYLKHVL-VNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAPV 437 (441)
Q Consensus 381 D~~~~G~is~~ef~~~l-~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~~ 437 (441)
|.|++|+|+.+||+.++ ..+|..++++++..+|..+|.|+||.|+|+||+.+|..-+
T Consensus 263 D~d~dG~Is~~El~~~l~~~~g~~ls~~e~~~l~~~~D~d~dG~Is~~EF~~~~~~~~ 320 (323)
T 1ij5_A 263 DFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLLMF 320 (323)
T ss_dssp CSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHHHC
T ss_pred CCCCCCCccHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHhc
Confidence 99999999999999999 8899889999999999999999999999999999987543
No 21
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=99.81 E-value=1.8e-18 Score=149.93 Aligned_cols=154 Identities=19% Similarity=0.326 Sum_probs=127.4
Q ss_pred CCccCHHHHHHHHHHcCCCcCHHHHHHH----HHh-CCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccH
Q psy2947 279 GTIKTLDELSVIMRSLGMSPTIAELKKY----LAE-KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSF 353 (441)
Q Consensus 279 G~i~~~~el~~~~~~~~~~~~~~~~~~~----~~~-~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~ 353 (441)
|.+ +.+++..+.+..+. +..++..+ +.+ ++|.|+++||..++........+.+.+..+|+.+|.|++|.|++
T Consensus 6 ~~l-~~~el~~~~~~~~~--~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~ 82 (190)
T 2l2e_A 6 SKL-SQDQLQDLVRSTRF--DKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDF 82 (190)
T ss_dssp CCS-CHHHHHHHHHHHCS--CSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEH
T ss_pred ccC-CHHHHHHHHHhcCC--CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeH
Confidence 556 67777777776543 34444443 357 79999999999999987655566788999999999999999999
Q ss_pred HHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh------------CCCCCHHHHHHHHHHhCCCCC
Q psy2947 354 PDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW------------GEGLSSKEVDQIFREANVTMN 421 (441)
Q Consensus 354 ~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~------------~~~l~~~~~~~l~~~~d~d~d 421 (441)
+||..++.... .....+.++.+|+.+|.|++|.|+++||+.++... +...++++++.+|+.+|.|++
T Consensus 83 ~ef~~~~~~~~-~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~d 161 (190)
T 2l2e_A 83 KEFICALSVTS-RGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKD 161 (190)
T ss_dssp HHHHHHHTTSS-CSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSS
T ss_pred HHHHHHHHHHc-CCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCC
Confidence 99999998763 34457889999999999999999999999999872 235788999999999999999
Q ss_pred CceeHHHHHHHHhcc
Q psy2947 422 SKVRYEDFVKIACAP 436 (441)
Q Consensus 422 g~i~~~ef~~~l~~~ 436 (441)
|.|+|+||+.++.+.
T Consensus 162 G~I~~~Ef~~~~~~~ 176 (190)
T 2l2e_A 162 GQLTLEEFCEGSKRD 176 (190)
T ss_dssp CCBCHHHHHHHHHTC
T ss_pred CcCcHHHHHHHHHhC
Confidence 999999999998653
No 22
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=99.81 E-value=6.9e-19 Score=150.34 Aligned_cols=152 Identities=14% Similarity=0.173 Sum_probs=125.2
Q ss_pred cccchHHHHHhhhccccC--CCccCHHHHHH----HHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHH
Q psy2947 261 FKTPYLEFRECFFLFARN--GTIKTLDELSV----IMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPK 334 (441)
Q Consensus 261 ~~~~~~~l~~~f~~~d~~--G~i~~~~el~~----~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~ 334 (441)
++.++.+++++|..+|.+ |.| +.+|+.. +++.++..++..++..+... + ..
T Consensus 2 s~~~~~~l~~~F~~~D~d~~G~i-~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~-------------~---------~~ 58 (176)
T 1nya_A 2 TAIASDRLKKRFDRWDFDGNGAL-ERADFEKEAQHIAEAFGKDAGAAEVQTLKNA-------------F---------GG 58 (176)
T ss_dssp CSHHHHHHHHHHHHCCSSCCSSB-CSHHHHHHHHHHHHHTSSCSSSHHHHHHHHH-------------H---------HH
T ss_pred cHHHHHHHHHHHHHHcCCCCCcc-cHHHHHHHHHHHHHHcCCCCCcHHHHHHHHH-------------H---------HH
Confidence 456788899999999875 788 7889988 67777766666665544421 1 13
Q ss_pred HHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCC-------hHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHH
Q psy2947 335 EVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDI-------PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 407 (441)
Q Consensus 335 ~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~-------~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~ 407 (441)
.+..+|+.+|.|++|.|+++||..++......... .+.++.+|+.+|.+++|.|+.+||+.++..+| ++++
T Consensus 59 ~~~~lf~~~D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g--~~~~ 136 (176)
T 1nya_A 59 LFDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKA 136 (176)
T ss_dssp HHHHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCHH
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC--CCHH
Confidence 46688999999999999999999998876444332 35688999999999999999999999999998 8999
Q ss_pred HHHHHHHHhCCCCCCceeHHHHHHHHhccC
Q psy2947 408 EVDQIFREANVTMNSKVRYEDFVKIACAPV 437 (441)
Q Consensus 408 ~~~~l~~~~d~d~dg~i~~~ef~~~l~~~~ 437 (441)
+++.+|+.+|.|++|.|+|+||++++.+.+
T Consensus 137 ~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~ 166 (176)
T 1nya_A 137 EAAEAFNQVDTNGNGELSLDELLTAVRDFH 166 (176)
T ss_dssp HHHHHHHHHCTTCSSEEEHHHHHHHHSCCS
T ss_pred HHHHHHHHhCCCCCCCCcHHHHHHHHHHHh
Confidence 999999999999999999999999997654
No 23
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=99.81 E-value=1.8e-19 Score=149.49 Aligned_cols=130 Identities=18% Similarity=0.315 Sum_probs=107.7
Q ss_pred HHHhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhh-cCCCCCcccHHHHHHHHHhh--c---cCCCChHHHHHHHHH
Q psy2947 306 YLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAA-DTTKSGKLSFPDFLKVMHTH--S---KAEDIPKEVVDAFKA 379 (441)
Q Consensus 306 ~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~-D~d~~g~i~~~ef~~~~~~~--~---~~~~~~~~~~~~f~~ 379 (441)
++.+++|.|+.+||..++... +...+...+..+|+.+ |.+++|.|+++||..++... . ......+.++.+|+.
T Consensus 13 ~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~F~~ 91 (148)
T 1m45_A 13 FDKKGQGAIAKDSLGDYLRAI-GYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQV 91 (148)
T ss_dssp HCTTCCSEEEGGGHHHHHHHT-TCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHHHHHHT
T ss_pred HCCCCCCCCCHHHHHHHHHHh-CCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccHHHHHHHHHH
Confidence 335667777777777777655 3345677888889999 99999999999999988776 2 334446789999999
Q ss_pred hCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhcc
Q psy2947 380 ADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 380 ~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~ 436 (441)
+|++++|.|+.+||+.++..+|.++++++++.+++.+|.|++|.|+|+||+.+|.++
T Consensus 92 ~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~k 148 (148)
T 1m45_A 92 FDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLRQ 148 (148)
T ss_dssp TCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHCC
T ss_pred hCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999998753
No 24
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=99.80 E-value=4.1e-19 Score=152.33 Aligned_cols=143 Identities=37% Similarity=0.643 Sum_probs=109.3
Q ss_pred ecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHHHHH
Q psy2947 260 TFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVV 337 (441)
Q Consensus 260 l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~ 337 (441)
+++.++..+++.|..+|.+ |.| +..|+..+++.++. ..+...+.
T Consensus 5 l~~~~~~~l~~~F~~~D~d~~G~i-~~~e~~~~l~~~~~---------------------------------~~~~~~~~ 50 (179)
T 2f2o_A 5 LTEEQIAEFKEAFSLFDKDGDGTI-TTKELGTVMRSLGQ---------------------------------NPTEAELQ 50 (179)
T ss_dssp -CCSHHHHHHHHHHHHCTTCSSCB-CHHHHHHHHHHTTC---------------------------------CCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcC-cHHHHHHHHHHcCC---------------------------------CCCHHHHH
Confidence 4455566666666666654 455 55555555555442 24456677
Q ss_pred HHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Q psy2947 338 DAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREAN 417 (441)
Q Consensus 338 ~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d 417 (441)
.+|+.+|.|++|.|+++||..++..........+.++.+|+.+|.+++|.|+.+||++++..+|..+++++++.+|+.+|
T Consensus 51 ~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D 130 (179)
T 2f2o_A 51 DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 130 (179)
T ss_dssp HHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHC
T ss_pred HHHHHhccCCCCCCcHHHHHHHHHHHccCcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcC
Confidence 78888999999999999999888654322223467889999999999999999999999999999999999999999999
Q ss_pred CCCCCceeHHHHHHHHhcc
Q psy2947 418 VTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 418 ~d~dg~i~~~ef~~~l~~~ 436 (441)
.|++|.|+|+||+.++...
T Consensus 131 ~~~dg~i~~~eF~~~~~~~ 149 (179)
T 2f2o_A 131 IDGDGQVNYEEFVQMMTAK 149 (179)
T ss_dssp TTCSSSEEHHHHHHHSCC-
T ss_pred CCCCCcCcHHHHHHHHHHc
Confidence 9999999999999998653
No 25
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=99.80 E-value=5.8e-19 Score=161.98 Aligned_cols=176 Identities=16% Similarity=0.241 Sum_probs=131.5
Q ss_pred eecccchHHHHHhhhccccC--CCccCHHHHHHHHH----HcCC--CcCHHHHHH--------HHHhCCCcccHHHHHHH
Q psy2947 259 FTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMR----SLGM--SPTIAELKK--------YLAEKGGKLSFPDFLKV 322 (441)
Q Consensus 259 ~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~----~~~~--~~~~~~~~~--------~~~~~~g~i~~~ef~~~ 322 (441)
.++..+..+++++|..+|.+ |.| +..|+..+++ .++. .++..++.. ++.+++|.|+++||..+
T Consensus 4 ~~~~~~~~~l~~~F~~~D~d~~G~i-~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~ 82 (272)
T 2be4_A 4 AFANLDAAGFLQIWQHFDADDNGYI-EGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANM 82 (272)
T ss_dssp CCCCCCHHHHHHHHHHHCTTCCSEE-EGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHhcCCCCCCc-CHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHH
Confidence 34566778888999888875 778 7888988888 7777 777776654 33478889999999888
Q ss_pred H-----------HhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhc----c----------------------
Q psy2947 323 M-----------HTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHS----K---------------------- 365 (441)
Q Consensus 323 ~-----------~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~----~---------------------- 365 (441)
+ ... ......+.++.+|+.+|.|++|.|+.+||..++.... .
T Consensus 83 ~~~~~~~~~~~~~~~-~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~ 161 (272)
T 2be4_A 83 ILPQEENFLLIFRRE-APLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNK 161 (272)
T ss_dssp HSCHHHHHHHHHHHH-SCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSC
T ss_pred HhhhhHHHHHHHhhc-cCcccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCC
Confidence 3 222 2234566677777777777777777777766554220 0
Q ss_pred -------------CC----------------CChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCC----CCCHHHHHH-
Q psy2947 366 -------------AE----------------DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGE----GLSSKEVDQ- 411 (441)
Q Consensus 366 -------------~~----------------~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~----~l~~~~~~~- 411 (441)
.. ...+.++.+|+.+|.|++|.|+.+||+++++.++. .+++++++.
T Consensus 162 dg~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~ 241 (272)
T 2be4_A 162 DGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKF 241 (272)
T ss_dssp SSEEEHHHHGGGSCCSSCSSTTSCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHHHSSSCCHHHHHHH
T ss_pred CCcCcHHHHHHHHhhhHHHHhhhhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHHcCCCCCHHHHHHH
Confidence 00 11245778899999999999999999999988765 789988877
Q ss_pred ---HHHHhCCCCCCceeHHHHHHHHhcc
Q psy2947 412 ---IFREANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 412 ---l~~~~d~d~dg~i~~~ef~~~l~~~ 436 (441)
+|+.+|.|+||.|+|+||+.+|...
T Consensus 242 ~~~l~~~~D~d~dG~is~~EF~~~~~~~ 269 (272)
T 2be4_A 242 RECLLTHCDMNKDGKIQKSELALCLGLK 269 (272)
T ss_dssp HHHHHHHHCCSTTCEEEHHHHHHHTTCC
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHccC
Confidence 9999999999999999999998754
No 26
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=99.80 E-value=4.9e-19 Score=148.98 Aligned_cols=124 Identities=22% Similarity=0.436 Sum_probs=98.7
Q ss_pred CCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhcc---CCCChHHHHHHHHHhCCCCCCc
Q psy2947 311 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSK---AEDIPKEVVDAFKAADTTKSGT 387 (441)
Q Consensus 311 ~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~---~~~~~~~~~~~f~~~D~~~~G~ 387 (441)
+|.|+.+||..++... +...+...+..+|+.+|.|++|.|+++||..++..... .....+.++.+|+.+|.|++|.
T Consensus 33 ~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~ 111 (161)
T 1dtl_A 33 DGSISTKELGKVMRML-GQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGY 111 (161)
T ss_dssp GGSBCHHHHHHHHHHT-TCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSE
T ss_pred CCcCcHHHHHHHHHHc-CCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCCCCCc
Confidence 4444444444444433 12345667778888999999999999999998887643 3344678999999999999999
Q ss_pred ccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 388 VPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 388 is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
|+.+||+.++..+|.++++++++.+|+.+|.|++|.|+|+||+.++.+
T Consensus 112 i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 159 (161)
T 1dtl_A 112 IDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159 (161)
T ss_dssp EEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred CcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999864
No 27
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=99.80 E-value=4.5e-19 Score=148.48 Aligned_cols=126 Identities=25% Similarity=0.368 Sum_probs=104.0
Q ss_pred hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccC-CCChHHHHHHHHHhCCCCCCc
Q psy2947 309 EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKA-EDIPKEVVDAFKAADTTKSGT 387 (441)
Q Consensus 309 ~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~-~~~~~~~~~~f~~~D~~~~G~ 387 (441)
+++|.|+.+||..++.... ...+...+..+ +.+|.+++|.|+++||..++...... ....+.++.+|+.+|.+++|.
T Consensus 23 d~~G~i~~~el~~~l~~~g-~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~ 100 (156)
T 1wdc_C 23 GRDGAVDAFKLGDVCRCLG-INPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGF 100 (156)
T ss_dssp CSSSCEEGGGHHHHHHHTT-CCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSE
T ss_pred CCCCCCcHHHHHHHHHHcC-CCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHHHHHHHHhCCCCCCc
Confidence 4555555555555555432 23445666677 77999999999999999988877543 455688999999999999999
Q ss_pred ccHHHHHHHHHHhCCCCCHHHHHHHHHH--hCCCCCCceeHHHHHHHHhcc
Q psy2947 388 VPAKYLKHVLVNWGEGLSSKEVDQIFRE--ANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 388 is~~ef~~~l~~~~~~l~~~~~~~l~~~--~d~d~dg~i~~~ef~~~l~~~ 436 (441)
|+.+||+.++..+|..+++++++.+++. +|.|++|.|+|+||+.++.+.
T Consensus 101 I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_C 101 ISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG 151 (156)
T ss_dssp EEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHC
T ss_pred CcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhcC
Confidence 9999999999999999999999999999 999999999999999999754
No 28
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.80 E-value=1.2e-20 Score=198.19 Aligned_cols=136 Identities=14% Similarity=0.100 Sum_probs=98.0
Q ss_pred cCcccCCCCCCCEEEccCCCCCc------------------CCcCcc--CCCCCcEEEccCCcCCCCCCchhhhcCCCCC
Q psy2947 73 IGRRIFKCDTVEVLSLKSNSLTS------------------LPPDIG--RLTNLRVLCLTDNCLQNASIPFTLTFCKNLT 132 (441)
Q Consensus 73 i~~~~~~l~~L~~L~l~~n~l~~------------------lp~~~~--~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~ 132 (441)
||..+.++++|++|+|++|+++. +|..++ .+++|+.|+|++|.+. +.+|..++++++|+
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~-~~iP~~l~~L~~L~ 518 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNM-TQLPDFLYDLPELQ 518 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTC-CSCCGGGGGCSSCC
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCC-ccChHHHhCCCCCC
Confidence 67778888999999999999987 888877 8999999999999887 78898889999999
Q ss_pred EEEccCCC-CC--ccchhhcCCC-------CCCEEEccCCcCccCcccccccccccc--cccccchhHHH-HhhcccccC
Q psy2947 133 HLYLDNNL-LD--ALPGFLLSMP-------QLDTVYRHGNHNYFKSTFMWYHSDIHA--RIRSTSTRDEV-LRKQKKLHQ 199 (441)
Q Consensus 133 ~L~l~~n~-l~--~lp~~~~~l~-------~L~~L~l~~N~~~~~~~~~~~~~~~p~--~l~~l~~~~~~-l~~~~~~~~ 199 (441)
+|+|++|+ ++ .+|..++.++ +|+.|++++|.+.. +|. .+..++.+..+ +.+|.+..+
T Consensus 519 ~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~----------ip~~~~l~~L~~L~~L~Ls~N~l~~l 588 (876)
T 4ecn_A 519 SLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEE----------FPASASLQKMVKLGLLDCVHNKVRHL 588 (876)
T ss_dssp EEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCB----------CCCHHHHTTCTTCCEEECTTSCCCBC
T ss_pred EEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCc----------cCChhhhhcCCCCCEEECCCCCcccc
Confidence 99999997 76 4776555444 88888888888642 344 44444444444 444444444
Q ss_pred CchhhhhhhhcccccccccCC
Q psy2947 200 PSRLQDLAVQSVIASKENFFE 220 (441)
Q Consensus 200 p~~l~~l~~l~~l~l~~n~~~ 220 (441)
| .+..+++|+.|++++|.+.
T Consensus 589 p-~~~~L~~L~~L~Ls~N~l~ 608 (876)
T 4ecn_A 589 E-AFGTNVKLTDLKLDYNQIE 608 (876)
T ss_dssp C-CCCTTSEESEEECCSSCCS
T ss_pred h-hhcCCCcceEEECcCCccc
Confidence 4 4455555555555555443
No 29
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=99.80 E-value=1.3e-18 Score=148.50 Aligned_cols=152 Identities=15% Similarity=0.194 Sum_probs=131.4
Q ss_pred chHHHHHhhhccccC--CCccCHHHHHHHHHHc-C-------CCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCC
Q psy2947 264 PYLEFRECFFLFARN--GTIKTLDELSVIMRSL-G-------MSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKA 329 (441)
Q Consensus 264 ~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~-~-------~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~ 329 (441)
++.+++++|..+| + |.| +.+|++.+++.+ + ..++..++..++. +++|.|+++||..++...
T Consensus 2 ~~~~l~~~F~~~D-d~~G~i-~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~--- 76 (173)
T 1alv_A 2 EVRQFRRLFAQLA-GDDMEV-SATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI--- 76 (173)
T ss_dssp HHHHHHHHHHHHH-GGGTSB-CHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH---
T ss_pred chhHHHHHHHHHh-CCCCCc-CHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHHH---
Confidence 5678999999998 6 889 899999999987 5 5677777777664 689999999999998853
Q ss_pred CCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHH
Q psy2947 330 EDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 409 (441)
Q Consensus 330 ~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~ 409 (441)
..++.+|+.+|.|++|.|+.+||..++... +.....+.++.+|+.+| +++|.|+++||..++... +.+
T Consensus 77 ----~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~~------~~~ 144 (173)
T 1alv_A 77 ----KKWQAIYKQFDVDRSGTIGSSELPGAFEAA-GFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVRL------DAM 144 (173)
T ss_dssp ----HHHHHHHHHHCTTCCSSBCTTTHHHHHHHH-TCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHHH------HHH
T ss_pred ----HHHHHHHHHHCCCCCCCCCHHHHHHHHHHc-CCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH------HHH
Confidence 679999999999999999999999999877 44556789999999999 999999999999999764 678
Q ss_pred HHHHHHhCCCCCCceeHHHHHHHH
Q psy2947 410 DQIFREANVTMNSKVRYEDFVKIA 433 (441)
Q Consensus 410 ~~l~~~~d~d~dg~i~~~ef~~~l 433 (441)
..+|+.+|.|++|.|+.+ |.+++
T Consensus 145 ~~~F~~~D~d~~G~i~~~-~~~~l 167 (173)
T 1alv_A 145 FRAFKSLDKDGTGQIQVN-IQEWL 167 (173)
T ss_dssp HHHHHHHSSSCCSEEEEE-HHHHH
T ss_pred HHHHHHhCCCCCCeecHh-HHHHH
Confidence 899999999999999866 55554
No 30
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=99.80 E-value=1.8e-18 Score=143.46 Aligned_cols=124 Identities=20% Similarity=0.379 Sum_probs=99.1
Q ss_pred hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhh---cCCCCCcccHHHHHHHHHhh--ccCCCChHHHHHHHHHhCCC
Q psy2947 309 EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAA---DTTKSGKLSFPDFLKVMHTH--SKAEDIPKEVVDAFKAADTT 383 (441)
Q Consensus 309 ~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~---D~d~~g~i~~~ef~~~~~~~--~~~~~~~~~~~~~f~~~D~~ 383 (441)
+++|.|+.+||..++... ....+.+.+..+|+.+ |.++ |.|+++||..++... .......+.++.+|+.+|.+
T Consensus 20 ~~~G~i~~~el~~~l~~~-~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~d 97 (149)
T 2mys_C 20 TGDAKITASQVGDIARAL-GQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKE 97 (149)
T ss_pred CCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHHHHHHHHHhCCC
Confidence 344444444444444333 1223456677777778 9999 999999999988775 33444467899999999999
Q ss_pred CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 384 KSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 384 ~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
++|.|+.+||+.++..+|..+++++++.+++. |.|++|.|+|+||+.+|.+
T Consensus 98 ~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~ 148 (149)
T 2mys_C 98 GNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS 148 (149)
T ss_pred CCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence 99999999999999999999999999999999 9999999999999999865
No 31
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.79 E-value=9.7e-19 Score=144.36 Aligned_cols=127 Identities=24% Similarity=0.437 Sum_probs=100.5
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhc-cCCCChHHHHHHHHHhCCCCCC
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHS-KAEDIPKEVVDAFKAADTTKSG 386 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~-~~~~~~~~~~~~f~~~D~~~~G 386 (441)
.+++|.|+.+||..++... ....+.+.+..+|+. +++|.|+++||..++.... ......+.++.+|+.+|.+++|
T Consensus 16 ~d~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G 91 (145)
T 2bl0_B 16 KDNDGKVSIEELGSALRSL-GKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNG 91 (145)
T ss_dssp TTCSSCEEGGGHHHHHHHT-TCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHHHHHHHHHCSSSSS
T ss_pred CCCcCccCHHHHHHHHHHh-CCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHHHHHHHHhCCCCCC
Confidence 4556666666666666554 223455566666665 6778888888888776543 2333457889999999999999
Q ss_pred cccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhccCC
Q psy2947 387 TVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAPVP 438 (441)
Q Consensus 387 ~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~~~ 438 (441)
.|+.+||+.++..+|.++++++++.+++.+|.|++|.|+|+||+.++.+.++
T Consensus 92 ~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~ 143 (145)
T 2bl0_B 92 TIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVTGYP 143 (145)
T ss_dssp EEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHHSSC
T ss_pred eEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999987765
No 32
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=99.79 E-value=2e-18 Score=146.89 Aligned_cols=143 Identities=15% Similarity=0.179 Sum_probs=121.7
Q ss_pred ccCCCccCHHHHHHHHHHc------CCCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcC
Q psy2947 276 ARNGTIKTLDELSVIMRSL------GMSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADT 345 (441)
Q Consensus 276 d~~G~i~~~~el~~~~~~~------~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~ 345 (441)
|.+|.| +.+|++.+++.+ +..++..++..++. +++|.|+++||..++... .+++.+|+.||
T Consensus 16 ~~dG~I-~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~-------~~l~~aF~~fD- 86 (174)
T 2i7a_A 16 PRGSDI-DATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRL-------VHYQHVFQKVQ- 86 (174)
T ss_dssp C-CCCE-EHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHH-------HHHHHHHHHHC-
T ss_pred CCCCcC-CHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH-------HHHHHHHHHhc-
Confidence 456999 899999999987 55777888777764 688999999999998754 67999999999
Q ss_pred CCCCcccHHHHHHHHHhhc---cCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCC
Q psy2947 346 TKSGKLSFPDFLKVMHTHS---KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNS 422 (441)
Q Consensus 346 d~~g~i~~~ef~~~~~~~~---~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg 422 (441)
|++|.|+.+||+.++.... +.....++++.+++.+| +++|.|+++||..++... +.+..+|+.+|+|++|
T Consensus 87 d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~------~~~~~~F~~~D~d~~G 159 (174)
T 2i7a_A 87 TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMRL------EAMAKTFRNLSKDGKG 159 (174)
T ss_dssp SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHHH------HHHHHHHHHHCSSSSC
T ss_pred CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCCC
Confidence 9999999999999998761 33456788999999999 999999999999999764 5788999999999999
Q ss_pred -ceeHHHHHHHHh
Q psy2947 423 -KVRYEDFVKIAC 434 (441)
Q Consensus 423 -~i~~~ef~~~l~ 434 (441)
.++++||+.++.
T Consensus 160 I~~~~~Ef~~~~~ 172 (174)
T 2i7a_A 160 LYLTEMEWMSLVM 172 (174)
T ss_dssp CCCCHHHHHHHHH
T ss_pred ceecHHHHHHHHH
Confidence 459999998764
No 33
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=99.79 E-value=1.9e-18 Score=148.76 Aligned_cols=127 Identities=18% Similarity=0.294 Sum_probs=109.5
Q ss_pred hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcc
Q psy2947 309 EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTV 388 (441)
Q Consensus 309 ~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~i 388 (441)
+++|.|+++||..++........+...+..+|+.+|.|++|.|+++||..++..... ....+.++.+|+.+|.|++|.|
T Consensus 31 d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~-~~~~~~~~~~f~~~D~d~~G~i 109 (183)
T 1s6c_A 31 XPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLR-GTVHEKLRWTFNLYDINKDGYI 109 (183)
T ss_dssp CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHH-CCHHHHHHHHHHHHCTTCSSCE
T ss_pred CCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcC-CCHHHHHHHHHHHhCCCCCCeE
Confidence 689999999999999987655578899999999999999999999999999886632 3346789999999999999999
Q ss_pred cHHHHHHHHHHh----CCC----CC----HHHHHHHHHHhCCCCCCceeHHHHHHHHhcc
Q psy2947 389 PAKYLKHVLVNW----GEG----LS----SKEVDQIFREANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 389 s~~ef~~~l~~~----~~~----l~----~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~ 436 (441)
+.+||+.++..+ |.. ++ .++++.+|+.+|.|++|.|+|+||+.++.+.
T Consensus 110 ~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~~ 169 (183)
T 1s6c_A 110 NKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQED 169 (183)
T ss_dssp EHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSC
T ss_pred cHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHhcC
Confidence 999999999886 632 44 3889999999999999999999999998653
No 34
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=99.79 E-value=5.9e-19 Score=148.29 Aligned_cols=142 Identities=23% Similarity=0.400 Sum_probs=109.0
Q ss_pred ecccchHHHHHhhhccc--cC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHHH
Q psy2947 260 TFKTPYLEFRECFFLFA--RN--GTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKE 335 (441)
Q Consensus 260 l~~~~~~~l~~~f~~~d--~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 335 (441)
+++.++.+++++|..+| .+ |.| +..++..+++.++..+ +...
T Consensus 3 ls~~~~~~l~~~F~~~D~~~d~~G~i-~~~el~~~l~~lg~~~---------------------------------~~~~ 48 (159)
T 2ovk_C 3 LTKDEIEEVREVFDLFDFWDGRDGDV-DAAKVGDLLRCLGMNP---------------------------------TEAQ 48 (159)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTSSSEE-EGGGHHHHHHHTTCCC---------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCCCC-cHHHHHHHHHHcCCCC---------------------------------CHHH
Confidence 34556666666666666 43 555 5666666666655443 4455
Q ss_pred HHHHHHhhcCCCCCcccHHHHHHHHHh--hccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHH
Q psy2947 336 VVDAFKAADTTKSGKLSFPDFLKVMHT--HSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIF 413 (441)
Q Consensus 336 ~~~~f~~~D~d~~g~i~~~ef~~~~~~--~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~ 413 (441)
+..+|+.+|. ++|.|+++||..++.. ........+.++.+|+.+|++++|+|+.+||++++..+|.++++++++.++
T Consensus 49 ~~~l~~~~d~-~~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~ 127 (159)
T 2ovk_C 49 VHQHGGTKKM-GEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIF 127 (159)
T ss_dssp HHHTTCCSST-TSCEEEHHHHHHHHHHHTTCSTTCCHHHHHHHHHHTCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHH
T ss_pred HHHHHHHhcC-CCCeEcHHHHHHHHHHHhhccCCCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 5556666776 4688889988888743 223334467899999999999999999999999999999999999999999
Q ss_pred H--HhCCCCCCceeHHHHHHHHhcc
Q psy2947 414 R--EANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 414 ~--~~d~d~dg~i~~~ef~~~l~~~ 436 (441)
+ .+|.|++|.|+|+||+++|.+.
T Consensus 128 ~~~~~D~d~dg~i~~~eF~~~~~~~ 152 (159)
T 2ovk_C 128 TFCDIREDIDGNIKYEDLMKKVMAG 152 (159)
T ss_dssp HHTTCCCCTTCCEEHHHHHHHHHHC
T ss_pred HHhcCCCCCCCcEeHHHHHHHHhcC
Confidence 9 8899999999999999988654
No 35
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=3.2e-19 Score=158.39 Aligned_cols=164 Identities=18% Similarity=0.210 Sum_probs=111.3
Q ss_pred CcCCCCCccCC-CCccCCCC---CCCCC-CcccEEeccCCCc---C-cccCCCCCCCEEEccCCCCCcC-CcCccCCCCC
Q psy2947 37 TACQRNCSLEV-GGICSHIW---IPQYF-SHAFLLSLSYTPI---G-RRIFKCDTVEVLSLKSNSLTSL-PPDIGRLTNL 106 (441)
Q Consensus 37 ~~C~~~c~~~~-~~~c~~~~---~~~~l-~~L~~l~l~~n~i---~-~~~~~l~~L~~L~l~~n~l~~l-p~~~~~l~~L 106 (441)
.+||..|.|.. .+.|...+ +|..+ ++|+.|++++|.| + ..+..+++|++|+|++|+|+.+ |..|..+++|
T Consensus 3 ~~CP~~C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L 82 (220)
T 2v9t_B 3 LHCPAACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL 82 (220)
T ss_dssp CCSCTTSEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSC
T ss_pred CCCCCCCEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCC
Confidence 36999999953 36676533 33322 4677777777744 2 2456677777777777777755 4557777777
Q ss_pred cEEEccCCcCCCCCCchh-hhcCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCcCccCccccccccccccccccc
Q psy2947 107 RVLCLTDNCLQNASIPFT-LTFCKNLTHLYLDNNLLDALP-GFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRST 184 (441)
Q Consensus 107 ~~L~l~~n~l~~~~~p~~-~~~l~~L~~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l 184 (441)
++|+|++|.|+ .+|.. +..+++|++|+|++|+|+.++ ..|..+++|+.|+|++|.+
T Consensus 83 ~~L~Ls~N~l~--~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l-------------------- 140 (220)
T 2v9t_B 83 NSLVLYGNKIT--ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKL-------------------- 140 (220)
T ss_dssp CEEECCSSCCC--CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC--------------------
T ss_pred CEEECCCCcCC--ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcC--------------------
Confidence 77777777776 55554 467777777777777776664 5677777777777777774
Q ss_pred chhHHHHhhcccccCC-chhhhhhhhcccccccccCCCCCCCchhhhHHHh
Q psy2947 185 STRDEVLRKQKKLHQP-SRLQDLAVQSVIASKENFFEPGLFPGPLVDYIAR 234 (441)
Q Consensus 185 ~~~~~~l~~~~~~~~p-~~l~~l~~l~~l~l~~n~~~~~~~p~~~~~~l~~ 234 (441)
..+| ..+..++.|+.+++++|++.+..--.++..|+..
T Consensus 141 ------------~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l~~l~~~l~~ 179 (220)
T 2v9t_B 141 ------------QTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHT 179 (220)
T ss_dssp ------------SCCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHHHHHH
T ss_pred ------------CEECHHHHhCCCCCCEEEeCCCCcCCCCccHHHHHHHHh
Confidence 2333 2466778889999999999875444455555544
No 36
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=99.79 E-value=2.9e-18 Score=152.65 Aligned_cols=150 Identities=18% Similarity=0.257 Sum_probs=119.3
Q ss_pred CHHHHHHHHHHcCCCcCHHHHHHHH----H-hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHH
Q psy2947 283 TLDELSVIMRSLGMSPTIAELKKYL----A-EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFL 357 (441)
Q Consensus 283 ~~~el~~~~~~~~~~~~~~~~~~~~----~-~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~ 357 (441)
+.++++.+.+..+ .+..++..++ . +++|.|+++||..++........+...+..+|+.+|.|++|.|+++||.
T Consensus 35 ~~~~l~~l~~~~~--~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~ 112 (224)
T 1s1e_A 35 RPEGLEQLEAQTN--FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFV 112 (224)
T ss_dssp ---CHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHH
T ss_pred CHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHH
Confidence 3455555555443 3344443333 2 4899999999999999776555788999999999999999999999999
Q ss_pred HHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh----CCC----C----CHHHHHHHHHHhCCCCCCcee
Q psy2947 358 KVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW----GEG----L----SSKEVDQIFREANVTMNSKVR 425 (441)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~----~~~----l----~~~~~~~l~~~~d~d~dg~i~ 425 (441)
.++..... ....+.++.+|+.+|.|++|.|+.+||++++..+ |.. + ..++++.+|+.+|.|+||.|+
T Consensus 113 ~~l~~~~~-~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is 191 (224)
T 1s1e_A 113 TALSILLR-GTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVT 191 (224)
T ss_dssp HHHHHHHH-CCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEE
T ss_pred HHHHHHcc-CCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEe
Confidence 99887642 3346789999999999999999999999999876 532 3 348899999999999999999
Q ss_pred HHHHHHHHhc
Q psy2947 426 YEDFVKIACA 435 (441)
Q Consensus 426 ~~ef~~~l~~ 435 (441)
|+||+.++.+
T Consensus 192 ~~EF~~~~~~ 201 (224)
T 1s1e_A 192 LDEFLESCQE 201 (224)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999999864
No 37
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=99.79 E-value=2.4e-18 Score=144.05 Aligned_cols=143 Identities=24% Similarity=0.400 Sum_probs=113.5
Q ss_pred cceecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHH
Q psy2947 257 KVFTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPK 334 (441)
Q Consensus 257 ~~~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~ 334 (441)
...+++.++..++.+|..+|.+ |.| +.+++..+++.++..++..++..++.+++|.|+++||..++..
T Consensus 9 ~~~l~~~~~~~l~~~F~~~D~d~~G~i-~~~el~~~l~~~g~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~--------- 78 (156)
T 1wdc_B 9 LTKLPQKQIQEMKEAFSMIDVDRDGFV-SKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIFSD--------- 78 (156)
T ss_dssp ---CCHHHHHHHHHHHHHHCTTCSSSC-CHHHHHHHHHHHSSCCCHHHHHHHHTTSSSCCCHHHHHHHHHH---------
T ss_pred hccCCHHHHHHHHHHHHHHCCCCCCcC-cHHHHHHHHHHhCCCCCHHHHHHHHHhCCCcCcHHHHHHHHHH---------
Confidence 3456677888999999998875 788 8899999998888777777777777665666666666555542
Q ss_pred HHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHH
Q psy2947 335 EVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFR 414 (441)
Q Consensus 335 ~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~ 414 (441)
........+.++.+|+.+|++++|.|+.+||+.++..+|.++++++++.+|+
T Consensus 79 ----------------------------~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~ 130 (156)
T 1wdc_B 79 ----------------------------KLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFK 130 (156)
T ss_dssp ----------------------------HTCSCCCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHH
T ss_pred ----------------------------HhcCCChHHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 2222233567888999999999999999999999999999999999999999
Q ss_pred HhCCCCCCceeHHHHHHHHhccCC
Q psy2947 415 EANVTMNSKVRYEDFVKIACAPVP 438 (441)
Q Consensus 415 ~~d~d~dg~i~~~ef~~~l~~~~~ 438 (441)
.+|.| +|.|+|+||+.+|.+.-+
T Consensus 131 ~~d~~-dg~i~~~eF~~~~~~~~~ 153 (156)
T 1wdc_B 131 EAPVE-GGKFDYVKFTAMIKGSGE 153 (156)
T ss_dssp HCCEE-TTEECHHHHHHHHHTSCC
T ss_pred hcCCC-CCEEeHHHHHHHHhcCcc
Confidence 99999 999999999999976643
No 38
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=9.3e-19 Score=155.40 Aligned_cols=166 Identities=17% Similarity=0.207 Sum_probs=108.1
Q ss_pred CcCCCCCccCC-CCccCCC---CCCCCC-CcccEEeccCCCcC-----cccCCCCCCCEEEccCCCCCcCCc-CccCCCC
Q psy2947 37 TACQRNCSLEV-GGICSHI---WIPQYF-SHAFLLSLSYTPIG-----RRIFKCDTVEVLSLKSNSLTSLPP-DIGRLTN 105 (441)
Q Consensus 37 ~~C~~~c~~~~-~~~c~~~---~~~~~l-~~L~~l~l~~n~i~-----~~~~~l~~L~~L~l~~n~l~~lp~-~~~~l~~ 105 (441)
.+||..|+|.. .+.|+.. .+|..+ ..++.|+|++|.|. ..+..+++|++|+|++|+|+.+++ .|..+++
T Consensus 3 ~~CP~~C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~ 82 (220)
T 2v70_A 3 LACPEKCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASG 82 (220)
T ss_dssp -CCCTTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred CCCCCCCEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCC
Confidence 46999999953 3555542 233322 35567777777442 124566777777777777776655 3777777
Q ss_pred CcEEEccCCcCCCCCCchhhhcCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCcCccCccccccccccccccccc
Q psy2947 106 LRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLDAL-PGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRST 184 (441)
Q Consensus 106 L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~l-p~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l 184 (441)
|++|++++|.++ +..|..+..+++|++|+|++|+|+.+ |..|..+++|+.|+|++|.+
T Consensus 83 L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l-------------------- 141 (220)
T 2v70_A 83 VNEILLTSNRLE-NVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQI-------------------- 141 (220)
T ss_dssp CCEEECCSSCCC-CCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCC--------------------
T ss_pred CCEEECCCCccC-ccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcC--------------------
Confidence 777777777776 33333466777777777777777665 46666777777777777763
Q ss_pred chhHHHHhhcccccC-CchhhhhhhhcccccccccCCCCCCCchhhhHHHhh
Q psy2947 185 STRDEVLRKQKKLHQ-PSRLQDLAVQSVIASKENFFEPGLFPGPLVDYIARE 235 (441)
Q Consensus 185 ~~~~~~l~~~~~~~~-p~~l~~l~~l~~l~l~~n~~~~~~~p~~~~~~l~~~ 235 (441)
..+ |..+..+++|+.+++++|++.+..--.++.+|+...
T Consensus 142 ------------~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~l~~~~~~~ 181 (220)
T 2v70_A 142 ------------TTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKK 181 (220)
T ss_dssp ------------CCBCTTTTTTCTTCCEEECCSCCEECSGGGHHHHHHHHHS
T ss_pred ------------CEECHHHhcCCCCCCEEEecCcCCcCCCchHHHHHHHHhc
Confidence 233 456777888999999999998754444556666533
No 39
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=99.79 E-value=6.5e-19 Score=145.18 Aligned_cols=138 Identities=26% Similarity=0.465 Sum_probs=110.0
Q ss_pred cccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHHHHHH
Q psy2947 261 FKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVVD 338 (441)
Q Consensus 261 ~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 338 (441)
++.++.++++.|..+|.+ |.| +..++..+++.++..++..++..++..++
T Consensus 2 s~~~~~~l~~~F~~~D~d~~G~i-~~~el~~~l~~~g~~~~~~~~~~~~~~~~--------------------------- 53 (143)
T 3j04_B 2 DQSQIQEFKEAFNMIDQNRDGFI-DKEDLHDMLASMGKNPTDEYLEGMMSEAP--------------------------- 53 (143)
T ss_dssp CHHHHHHHHHHHTTTCSSCTTCC-CHHHHHHHHHHTSCCCCHHHHHTTTTTSS---------------------------
T ss_pred CHHHHHHHHHHHHHhCCCCCCCc-CHHHHHHHHHHhCCCCCHHHHHHHHHhCC---------------------------
Confidence 456788889999888875 788 78899999888887777766666554444
Q ss_pred HHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCC
Q psy2947 339 AFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANV 418 (441)
Q Consensus 339 ~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~ 418 (441)
|.|+++||..++..........+.++.+|+.+|.|++|.|+.+||+.++..+|.++++++++.+++.+|.
T Consensus 54 ----------g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~ 123 (143)
T 3j04_B 54 ----------GPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPI 123 (143)
T ss_dssp ----------SCCCHHHHHHHHHHTTTSSCCHHHHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTC
T ss_pred ----------CCcCHHHHHHHHHHHhccCCcHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCC
Confidence 4555555555444433333445778899999999999999999999999999999999999999999999
Q ss_pred CCCCceeHHHHHHHHhcc
Q psy2947 419 TMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 419 d~dg~i~~~ef~~~l~~~ 436 (441)
|++|.|+|+||+++|.+.
T Consensus 124 d~dg~i~~~eF~~~~~~~ 141 (143)
T 3j04_B 124 DKKGNFNYVEFTRILKHG 141 (143)
T ss_dssp CSSSCCCSTHHHHHHHSS
T ss_pred CCCCcCcHHHHHHHHhcc
Confidence 999999999999998764
No 40
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=99.78 E-value=6.6e-18 Score=146.25 Aligned_cols=151 Identities=18% Similarity=0.293 Sum_probs=121.1
Q ss_pred CHHHHHHHHHHcCCCcCHHHHHHHH----Hh-CCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHH
Q psy2947 283 TLDELSVIMRSLGMSPTIAELKKYL----AE-KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFL 357 (441)
Q Consensus 283 ~~~el~~~~~~~~~~~~~~~~~~~~----~~-~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~ 357 (441)
+.++++.+.+.. ..+..++..++ .+ ++|.|+++||..++..........+.+..+|+.+|.|++|.|+++||.
T Consensus 9 ~~~~l~~l~~~~--~~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~ 86 (190)
T 1fpw_A 9 SKDDLTCLKQST--YFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFI 86 (190)
T ss_dssp TTHHHHHHTTTC--CSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHH
T ss_pred CHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHH
Confidence 344454444432 23344433332 34 899999999999999875544566789999999999999999999999
Q ss_pred HHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh----C--------CCCCHHHHHHHHHHhCCCCCCcee
Q psy2947 358 KVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW----G--------EGLSSKEVDQIFREANVTMNSKVR 425 (441)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~----~--------~~l~~~~~~~l~~~~d~d~dg~i~ 425 (441)
.++.... .....+.++.+|+.+|.|++|.|+++||+.++... | ...++++++.+|+.+|.|++|.|+
T Consensus 87 ~~~~~~~-~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~ 165 (190)
T 1fpw_A 87 TVLSTTS-RGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYIT 165 (190)
T ss_dssp HHHHHHS-CCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEE
T ss_pred HHHHHHc-cCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCc
Confidence 9998774 33456889999999999999999999999999883 4 236788999999999999999999
Q ss_pred HHHHHHHHhcc
Q psy2947 426 YEDFVKIACAP 436 (441)
Q Consensus 426 ~~ef~~~l~~~ 436 (441)
++||++++.+.
T Consensus 166 ~~Ef~~~~~~~ 176 (190)
T 1fpw_A 166 LDEFREGSKVD 176 (190)
T ss_dssp HHHHHHHHHSS
T ss_pred HHHHHHHHHhC
Confidence 99999998753
No 41
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=99.78 E-value=2.9e-18 Score=146.11 Aligned_cols=120 Identities=18% Similarity=0.302 Sum_probs=110.9
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCc
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGT 387 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~ 387 (441)
.+++|.|+.+||..++........+...+..+|+.+|.|++|.|+++||..++... +.++.+|+.+|.+++|.
T Consensus 18 ~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~~-------~~~~~~F~~~D~d~~G~ 90 (172)
T 2znd_A 18 KDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI-------TDWQNVFRTYDRDNSGM 90 (172)
T ss_dssp TTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHHH-------HHHHHHHHHHCTTCSSE
T ss_pred CCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------HHHHHHHHHHCCCCCCc
Confidence 68999999999999998665355778899999999999999999999999988754 67899999999999999
Q ss_pred ccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 388 VPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 388 is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
|+.+||+.++..+|..+++++++.+++.+|.|++|.|+|+||+.++.
T Consensus 91 i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 137 (172)
T 2znd_A 91 IDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI 137 (172)
T ss_dssp ECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998875
No 42
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=99.78 E-value=1.5e-18 Score=146.10 Aligned_cols=125 Identities=19% Similarity=0.421 Sum_probs=99.3
Q ss_pred CCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCC---ChHHHHHHHHHhCCCCCC
Q psy2947 310 KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAED---IPKEVVDAFKAADTTKSG 386 (441)
Q Consensus 310 ~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~---~~~~~~~~f~~~D~~~~G 386 (441)
++|.|+.+||..++... +...+.+.+..+|+.+|.+++|.|+++||..++........ ..+.++.+|+.+|.+++|
T Consensus 33 ~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G 111 (162)
T 1top_A 33 GGGDISTKELGTVMRML-GQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADG 111 (162)
T ss_dssp CSSEEEGGGHHHHHHHT-TCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSS
T ss_pred CCCcCCHHHHHHHHHHc-CCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccccHHHHHHHHHHhCCCCCC
Confidence 34444444444444433 12345667778888899999999999999988765432111 246788999999999999
Q ss_pred cccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 387 TVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 387 ~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.|+.+||+.++..+|..+++++++.+|+.+|.|++|.|+|+||+.++..
T Consensus 112 ~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 160 (162)
T 1top_A 112 FIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160 (162)
T ss_dssp CBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred cCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999864
No 43
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=99.78 E-value=3.6e-19 Score=155.23 Aligned_cols=127 Identities=18% Similarity=0.352 Sum_probs=96.7
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCc
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGT 387 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~ 387 (441)
.+++|.|+.+||..++... ....+...+..+|+.+|.|++|.|+++||..++.... .....+.++.+|+.+|.|++|+
T Consensus 68 ~d~~G~Is~~El~~~l~~~-g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~-~~~~~~~l~~~F~~~D~d~~G~ 145 (197)
T 3pm8_A 68 VDNSGTLSSQEILDGLKKI-GYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQ-TYLKKEVCLIPFKFFDIDGNGK 145 (197)
T ss_dssp TTCSSEECHHHHHHHHHHH-C----CHHHHHHHHC-------CEEHHHHHHTTCCHH-HHCSHHHHHHHHHHHCTTCSSE
T ss_pred CCCCCcCCHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHH-hhhhHHHHHHHHHHHCCCCCCC
Confidence 4667777777777777765 2335667899999999999999999999998765442 1223578999999999999999
Q ss_pred ccHHHHHHHHHHh--CCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhcc
Q psy2947 388 VPAKYLKHVLVNW--GEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 388 is~~ef~~~l~~~--~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~ 436 (441)
|+.+||++++... +..+++++++.+|+.+|.|+||.|+|+||+.+|.+.
T Consensus 146 Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 196 (197)
T 3pm8_A 146 ISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSKK 196 (197)
T ss_dssp ECHHHHHHHHC----CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHCC
T ss_pred CCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHcC
Confidence 9999999999988 777889999999999999999999999999999763
No 44
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=99.78 E-value=1.9e-18 Score=157.69 Aligned_cols=175 Identities=15% Similarity=0.240 Sum_probs=141.1
Q ss_pred eecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCH------HHHHHHH----HhCCCcccHHHHHHHHHhh
Q psy2947 259 FTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTI------AELKKYL----AEKGGKLSFPDFLKVMHTH 326 (441)
Q Consensus 259 ~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~------~~~~~~~----~~~~g~i~~~ef~~~~~~~ 326 (441)
.+++.+..+++++|..+|.+ |.| +..|++.+++.++..++. .++..++ .+++|.|+++||..++...
T Consensus 9 ~l~~~~~~~l~~~F~~~D~d~~G~i-~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~ 87 (263)
T 2f33_A 9 QSSLITASQFFEIWLHFDADGSGYL-EGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTE 87 (263)
T ss_dssp TTSCCCHHHHHHHHHHHCTTCSSSB-CSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSC
T ss_pred hcCcccHHHHHHHHHHhCCCCCCCc-CHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhh
Confidence 45677888999999999976 889 899999999987644433 4444444 4789999999999997542
Q ss_pred --------cCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhc---cCCCChHHHHH----HHHHhCCCCCCcccHH
Q psy2947 327 --------SKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHS---KAEDIPKEVVD----AFKAADTTKSGTVPAK 391 (441)
Q Consensus 327 --------~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~---~~~~~~~~~~~----~f~~~D~~~~G~is~~ 391 (441)
.......+.++.+|+.+|.|++|.|+.+||..++.... +.....+.+.. +|+.+|.+++|.|+++
T Consensus 88 ~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ 167 (263)
T 2f33_A 88 ENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELT 167 (263)
T ss_dssp TTHHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHH
T ss_pred hhHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHH
Confidence 12345678899999999999999999999999988652 33344555555 9999999999999999
Q ss_pred HHHHHHHH-------h-CCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 392 YLKHVLVN-------W-GEGLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 392 ef~~~l~~-------~-~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
||..++.. . +.....+.+..+|+.+|.|++|.|+.+||..++.
T Consensus 168 ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~ 218 (263)
T 2f33_A 168 EMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLK 218 (263)
T ss_dssp HHHHHSCTTTCSHHHHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHH
Confidence 99998753 1 2446788999999999999999999999999884
No 45
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=99.78 E-value=3.1e-18 Score=148.57 Aligned_cols=131 Identities=16% Similarity=0.342 Sum_probs=116.0
Q ss_pred HHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhh
Q psy2947 284 LDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTH 363 (441)
Q Consensus 284 ~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~ 363 (441)
.++++.++..++ .+++|.|+.+||..++.. .....+.+.+..+|+.+|.|++|.|+++||..++...
T Consensus 26 ~~~l~~~F~~~D------------~d~~G~I~~~El~~~l~~-~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~ 92 (191)
T 1y1x_A 26 NQELMEWFRAVD------------TDGSGAISVPELNAALSS-AGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI 92 (191)
T ss_dssp TSCHHHHHHHHC------------TTCSSSBCHHHHHHHHCB-TTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc------------CCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence 345556666555 789999999999999943 2335678999999999999999999999999988754
Q ss_pred ccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 364 SKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 364 ~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
+.++.+|+.+|.|++|.|+.+||+.++..+|..+++++++.+|+.+|.|++|.|+|+||+.++.
T Consensus 93 -------~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 156 (191)
T 1y1x_A 93 -------LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSI 156 (191)
T ss_dssp -------HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred -------HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 6789999999999999999999999999999999999999999999999999999999999885
No 46
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=99.78 E-value=2.2e-18 Score=149.93 Aligned_cols=148 Identities=20% Similarity=0.266 Sum_probs=110.9
Q ss_pred eecccchHHHHHhhhccccC--CCccCHHHHH-----HHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCC
Q psy2947 259 FTFKTPYLEFRECFFLFARN--GTIKTLDELS-----VIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAED 331 (441)
Q Consensus 259 ~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~-----~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~ 331 (441)
.+++.++.+++++|..+|.+ |.| +.+|+. .+++.++..++..++.
T Consensus 13 ~~s~~~~~~l~~~F~~~D~d~~G~i-~~~El~~~~~~~~l~~~g~~~~~~~~~--------------------------- 64 (195)
T 1qv0_A 13 FDNPRWIKRHKHMFDFLDINGNGKI-TLDEIVSKASDDICAKLEATPEQTKRH--------------------------- 64 (195)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCSSCB-CHHHHHHHHHHTHHHHTTCCHHHHHHH---------------------------
T ss_pred cCCHHHHHHHHHHHhHcCCCCCCcC-cHHHHHHHHHHHHHHHcCCCccHHHHH---------------------------
Confidence 34677888888888888865 777 788887 4556555433222111
Q ss_pred CHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccC------CCChHHHH----HHHHHhCCCCCCcccHHHHHHHHHHhC
Q psy2947 332 IPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKA------EDIPKEVV----DAFKAADTTKSGTVPAKYLKHVLVNWG 401 (441)
Q Consensus 332 ~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~------~~~~~~~~----~~f~~~D~~~~G~is~~ef~~~l~~~~ 401 (441)
...+..+|+.+|.|++|.|+++||..++...... ....+.++ .+|+.+|.|++|.|+.+||+++++.+|
T Consensus 65 -~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g 143 (195)
T 1qv0_A 65 -QVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISG 143 (195)
T ss_dssp -HHHHHHHHHHTTCCTTCCBCHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHS
T ss_pred -HHHHHHHHHHcCCCCCceEcHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhC
Confidence 0146778888999999999999999877654211 11112343 899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 402 EGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 402 ~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.++++++++.+|+.+|.|++|.|+|+||++++..
T Consensus 144 ~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 177 (195)
T 1qv0_A 144 ISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLG 177 (195)
T ss_dssp SCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 9999999999999999999999999999998864
No 47
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=99.78 E-value=4.7e-18 Score=143.80 Aligned_cols=140 Identities=21% Similarity=0.396 Sum_probs=112.9
Q ss_pred eecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCC-CcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHHH
Q psy2947 259 FTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGM-SPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKE 335 (441)
Q Consensus 259 ~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~-~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 335 (441)
.+++.++..++.+|..+|.+ |.| +..++..+++.++. .++..++..++...+|.|+++||..++..
T Consensus 18 ~l~~~~~~~l~~~F~~~D~d~~G~i-~~~el~~~l~~~g~~~~~~~~~~~l~~~~dg~i~~~eF~~~~~~---------- 86 (166)
T 2mys_B 18 MFDETEIEDFKEAFTVIDQNADGII-DKDDLRETFAAMGRLNVKNEELDAMIKEASGPINFTVFLTMFGE---------- 86 (166)
T ss_pred hCCHHHHHHHHHHHHHHCCCCCCcC-CHHHHHHHHHHhCCCCCCHHHHHHHHHHCCCCcCHHHHHHHHHH----------
Confidence 55677888899999998875 788 78999999988887 77777777777665666666666655542
Q ss_pred HHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q psy2947 336 VVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFRE 415 (441)
Q Consensus 336 ~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~ 415 (441)
........+.++.+|+.+|.|++|.|+.+||+.++..+|.++++++++.+|+.
T Consensus 87 ---------------------------~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~ 139 (166)
T 2mys_B 87 ---------------------------KLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAA 139 (166)
T ss_pred ---------------------------HhccCCcHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHh
Confidence 22222235678889999999999999999999999999988999999999999
Q ss_pred hCCCCCCceeHHHHHHHHhcc
Q psy2947 416 ANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 416 ~d~d~dg~i~~~ef~~~l~~~ 436 (441)
+|.|++|.|+|+||+.++.+.
T Consensus 140 ~D~d~dg~I~~~eF~~~~~~~ 160 (166)
T 2mys_B 140 FPPDVAGNVDYKNICYVITHG 160 (166)
T ss_pred cCCCCCCeEeHHHHHHHHHhc
Confidence 999999999999999998765
No 48
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=99.78 E-value=2.2e-18 Score=149.48 Aligned_cols=152 Identities=16% Similarity=0.177 Sum_probs=119.8
Q ss_pred eecccchHHHHHhhhcc-ccC--CCccCHHHHHHHHHHc----CCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCC
Q psy2947 259 FTFKTPYLEFRECFFLF-ARN--GTIKTLDELSVIMRSL----GMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAED 331 (441)
Q Consensus 259 ~l~~~~~~~l~~~f~~~-d~~--G~i~~~~el~~~~~~~----~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~ 331 (441)
.+++.+..+++++|..+ |.+ |.| +.+|+..++..+ +..++..++..++.. +
T Consensus 5 ~ls~~~~~~l~~~F~~~~D~d~dG~i-~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~-------------~-------- 62 (191)
T 2ccm_A 5 QLSDFQRNKILRVFNTFYDCNHDGVI-EWDDFELAIKKICNLHSWPTDGKKHNEARAT-------------L-------- 62 (191)
T ss_dssp CCCHHHHHHHHHHHHHHTCTTCSSEE-CHHHHHHHHHHHHHHHTCCTTSHHHHHHHHH-------------H--------
T ss_pred hccHHHHHHHHHhccccccCCCCCee-eHHHHHHHHHHHHHHhCCCCCCHHHHHHHHH-------------H--------
Confidence 34566778888889888 865 778 788888888776 554444444443321 1
Q ss_pred CHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhcc--------CCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCC
Q psy2947 332 IPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSK--------AEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEG 403 (441)
Q Consensus 332 ~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~--------~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~ 403 (441)
...+..+|+.+|.|++|.|+++||..++..... .......++.+|+.+|.|++|.|+.+||+.++..+|
T Consensus 63 -~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g-- 139 (191)
T 2ccm_A 63 -KLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG-- 139 (191)
T ss_dssp -HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT--
T ss_pred -HHHHHHHHHhcCCCCCCeECHHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC--
Confidence 123566679999999999999999998876522 111235788999999999999999999999999888
Q ss_pred CCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 404 LSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 404 l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+++++++.+|+.+|.|+||.|+|+||+.++..
T Consensus 140 ~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~ 171 (191)
T 2ccm_A 140 IPKSDCDAAFDTLSDGGKTMVTREIFARLWTE 171 (191)
T ss_dssp CCHHHHHHHHHHHTTTTTSCCBHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHH
Confidence 89999999999999999999999999998854
No 49
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=99.78 E-value=4.7e-18 Score=149.39 Aligned_cols=155 Identities=14% Similarity=0.238 Sum_probs=115.8
Q ss_pred CCCccCHHHHHHHHHHcCCCcC-HHHHHHHH----Hh--CCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCc
Q psy2947 278 NGTIKTLDELSVIMRSLGMSPT-IAELKKYL----AE--KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGK 350 (441)
Q Consensus 278 ~G~i~~~~el~~~~~~~~~~~~-~~~~~~~~----~~--~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~ 350 (441)
.|.+ +.++++.+....+.... ..++..++ .+ ++|.|+.+||..++.. ........+..+|+.+|.|++|.
T Consensus 14 ~g~l-~~~el~~l~~~~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~--~~~~~~~~~~~~f~~~D~d~~g~ 90 (207)
T 2ehb_A 14 MRPP-GYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR--NRNRRNLFADRIFDVFDVKRNGV 90 (207)
T ss_dssp --------CHHHHHHHSSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS--CTTCCCHHHHHHHHHHCTTCSSE
T ss_pred cccc-CHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc--cccccHHHHHHHHHHhcCCCCCe
Confidence 3555 45666666554432221 11222223 45 8899999999999875 23344567788999999999999
Q ss_pred ccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHH----HhCCCCCHHHHHHH----HHHhCCCCCC
Q psy2947 351 LSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLV----NWGEGLSSKEVDQI----FREANVTMNS 422 (441)
Q Consensus 351 i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~----~~~~~l~~~~~~~l----~~~~d~d~dg 422 (441)
|+++||..++..........+.++.+|+.+|.|++|.|+.+||+++++ ..|..+++++++.+ |+.+|.|++|
T Consensus 91 i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG 170 (207)
T 2ehb_A 91 IEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDG 170 (207)
T ss_dssp ECHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSS
T ss_pred EeHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999987754444567899999999999999999999999996 46888998887554 4699999999
Q ss_pred ceeHHHHHHHHhc
Q psy2947 423 KVRYEDFVKIACA 435 (441)
Q Consensus 423 ~i~~~ef~~~l~~ 435 (441)
.|+|+||++++.+
T Consensus 171 ~I~~~Ef~~~~~~ 183 (207)
T 2ehb_A 171 KIDIDEWKDFVSL 183 (207)
T ss_dssp EECHHHHHHHHHH
T ss_pred cCcHHHHHHHHHh
Confidence 9999999999864
No 50
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=99.77 E-value=3.7e-18 Score=151.44 Aligned_cols=121 Identities=14% Similarity=0.182 Sum_probs=109.1
Q ss_pred HHHHhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCC
Q psy2947 305 KYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384 (441)
Q Consensus 305 ~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~ 384 (441)
.++.+++|.|+.+||..++... +...+.+.+..+|+.+|.|++|.|+++||..++... +.++.+|+.+|.|+
T Consensus 59 ~~D~d~~G~I~~~El~~~l~~~-g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~-------~~l~~~F~~~D~d~ 130 (220)
T 3sjs_A 59 GVDRDRSGTLEINELMMGQFPG-GIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM-------ELAYNLFVMNARAR 130 (220)
T ss_dssp HHCTTCCSSBCHHHHHHCCBGG-GBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-------HHHHHHHHHHCCSS
T ss_pred HhCCCCCCcCcHHHHHHHHHHc-CCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------HHHHHHHHHHCCCC
Confidence 3447899999999999998876 345678899999999999999999999999988765 67899999999999
Q ss_pred CCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 385 ~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
+|+|+.+||+++++.+|.++++++++.+++.+| |+||.|+|+||++++.
T Consensus 131 ~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~ 179 (220)
T 3sjs_A 131 SGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIAICA 179 (220)
T ss_dssp TTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHH
Confidence 999999999999999999999999999999999 9999999999999884
No 51
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=99.77 E-value=4.2e-18 Score=142.20 Aligned_cols=123 Identities=22% Similarity=0.354 Sum_probs=101.8
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCc
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGT 387 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~ 387 (441)
.+++|.|+.+|| ..+..... ...+..+|+.+|.+++|.|+++||..++..........+.++.+|+.+|.+++|.
T Consensus 17 ~d~~G~i~~~el-~~l~~~~~----~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~ 91 (155)
T 3ll8_B 17 LDNSGSLSVEEF-MSLPELQQ----NPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGY 91 (155)
T ss_dssp TTCSSSBCHHHH-TTSGGGTT----CTTHHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHHCTTCSSC
T ss_pred cCCCCeEcHHHH-HHhhcccc----chHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHhCCCCCCc
Confidence 455566666666 22222211 1267889999999999999999999999877555555688999999999999999
Q ss_pred ccHHHHHHHHHH-hCCCCCHHHHHHHHHH----hCCCCCCceeHHHHHHHHhc
Q psy2947 388 VPAKYLKHVLVN-WGEGLSSKEVDQIFRE----ANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 388 is~~ef~~~l~~-~~~~l~~~~~~~l~~~----~d~d~dg~i~~~ef~~~l~~ 435 (441)
|+.+||++++.. .|.++++++++.+++. +|.|++|.|+|+||+.++..
T Consensus 92 i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 144 (155)
T 3ll8_B 92 ISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGG 144 (155)
T ss_dssp BCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGG
T ss_pred CcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 999999999999 6989999999999999 99999999999999999965
No 52
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=99.77 E-value=7.9e-18 Score=146.91 Aligned_cols=156 Identities=17% Similarity=0.269 Sum_probs=133.2
Q ss_pred ecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCC-----CcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcC
Q psy2947 260 TFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGM-----SPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSK 328 (441)
Q Consensus 260 l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~-----~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~ 328 (441)
.++.+++++++ |..+|.+ |.| +.+|+..+++.++. .++..++..++. +++|.|+++||..++...
T Consensus 27 ~~~~~~~~l~~-F~~~D~d~~G~i-~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~-- 102 (198)
T 1juo_A 27 FPGQTQDPLYG-YFAAVAGQDGQI-DADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL-- 102 (198)
T ss_dssp CTTCCCCTTHH-HHHHHHTTTTEE-CHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH--
T ss_pred CCccccHHHHH-HHHHhCCCCCcC-CHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH--
Confidence 34567778888 8888875 889 89999999999875 567788777765 688999999999998754
Q ss_pred CCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHH
Q psy2947 329 AEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKE 408 (441)
Q Consensus 329 ~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~ 408 (441)
+.++.+|+.+|.|++|.|+.+||+.++... ......++++.+|+.+ |++|.|+++||.+++... ++
T Consensus 103 -----~~~~~~F~~~D~d~~G~I~~~el~~~l~~~-g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~------~~ 168 (198)
T 1juo_A 103 -----NGWRQHFISFDTDRSGTVDPQELQKALTTM-GFRLSPQAVNSIAKRY--STNGKITFDDYIACCVKL------RA 168 (198)
T ss_dssp -----HHHHHHHHTTCTTCCSEECHHHHHHHHHHT-TCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHHH------HH
T ss_pred -----HHHHHHHHHhCCCCCCcCCHHHHHHHHHHh-CCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH------HH
Confidence 689999999999999999999999999876 3445678899999999 899999999999999875 67
Q ss_pred HHHHHHHhCCCCCCceeH--HHHHHHH
Q psy2947 409 VDQIFREANVTMNSKVRY--EDFVKIA 433 (441)
Q Consensus 409 ~~~l~~~~d~d~dg~i~~--~ef~~~l 433 (441)
+..+|+.+|.|++|.|+. ++|+.++
T Consensus 169 ~~~~F~~~D~d~~G~is~~~~~~l~~~ 195 (198)
T 1juo_A 169 LTDSFRRRDTAQQGVVNFPYDDFIQCV 195 (198)
T ss_dssp HHHHHHHTCTTCCSEEEEEHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEeecHHHHHHHH
Confidence 889999999999999987 6666544
No 53
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=99.77 E-value=7.2e-18 Score=146.23 Aligned_cols=123 Identities=16% Similarity=0.287 Sum_probs=99.5
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCc
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGT 387 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~ 387 (441)
.+++|.|+.+||..++...... .+ ..+..+|+.+|.|++|.|+++||..++.... ....+.++.+|+.+|.|++|.
T Consensus 63 ~d~~G~i~~~El~~~l~~~g~~-~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~--~~~~~~l~~~F~~~D~d~~G~ 138 (191)
T 3k21_A 63 EDGKGYITKEQLKKGLEKDGLK-LP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRK--QLSKKLIYCAFRVFDVDNDGE 138 (191)
T ss_dssp TTCSSEECHHHHHHHHHHTTCC-CC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGG--GCCHHHHHHHHHHHSTTCSSC
T ss_pred CCCCCCCcHHHHHHHHHHcCCC-cH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhh--hccHHHHHHHHHHhCCCCCCc
Confidence 3455666666666666554332 22 6678889999999999999999999885543 244678999999999999999
Q ss_pred ccHHHHHHHHHH--hCCCCCH---HHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 388 VPAKYLKHVLVN--WGEGLSS---KEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 388 is~~ef~~~l~~--~~~~l~~---~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
|+.+||++++.. .+..+++ ++++.+|+.+|.|+||.|+|+||+++|.
T Consensus 139 Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 139 ITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp BCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred CCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 999999999998 4566776 4689999999999999999999999885
No 54
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=99.77 E-value=1.6e-18 Score=152.55 Aligned_cols=150 Identities=14% Similarity=0.145 Sum_probs=111.7
Q ss_pred ceecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCC--CcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCH
Q psy2947 258 VFTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGM--SPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIP 333 (441)
Q Consensus 258 ~~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~--~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~ 333 (441)
..+++.++.++++.|..+|.+ |.| +..|+..+++.++. .++..++..++..
T Consensus 28 ~~l~~~~~~~l~~~F~~~D~d~~G~i-~~~El~~~l~~~~~~~~~~~~~~~~l~~~------------------------ 82 (208)
T 2hpk_A 28 EDLHPKMLSRLYKRFDTFDLDSDGKM-EMDEVLYWPDRMRQLVNATDEQVEKMRDA------------------------ 82 (208)
T ss_dssp --------CHHHHHHHHHCTTCSSEE-CHHHHTHHHHHHHHHSCCCHHHHHHHHHH------------------------
T ss_pred HHcCHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHHhhcCCCHHHHHHHHHH------------------------
Confidence 345667778888888888875 777 78888888877664 4444444433311
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHH---------hhccCCCChHH-HHHHHHHhCCCCCCcccHHHHHHHHHHhCCC
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFLKVMH---------THSKAEDIPKE-VVDAFKAADTTKSGTVPAKYLKHVLVNWGEG 403 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~---------~~~~~~~~~~~-~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~ 403 (441)
++.+|+.+|.|++|.|+++||..++. .........+. ++.+|+.+|.|++|.|+.+||+.+++.+|
T Consensus 83 --~~~lf~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g-- 158 (208)
T 2hpk_A 83 --VRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD-- 158 (208)
T ss_dssp --HHHHHHHTTCBTTTBEEGGGHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT--
T ss_pred --HHHHHHHhCCCCCCeEcHHHHHHHHHHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--
Confidence 02245899999999999999999876 33222232334 78899999999999999999999999998
Q ss_pred CCHHHHHHHHHHhCCCCCCceeHHHHHHHHhcc
Q psy2947 404 LSSKEVDQIFREANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 404 l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~ 436 (441)
+++++++.+|+.+|.|+||.|+|+||+.++...
T Consensus 159 ~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 191 (208)
T 2hpk_A 159 VPQEAAYTFFEKADTDKSGKLERTELVHLFRKF 191 (208)
T ss_dssp SCTTHHHHHHHHHCTTCCSSBCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 889999999999999999999999999998654
No 55
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.77 E-value=2.4e-20 Score=191.78 Aligned_cols=157 Identities=8% Similarity=0.103 Sum_probs=100.4
Q ss_pred cCcccCCCCCCCEEEccCCCCCc------------------CCcCcc--CCCCCcEEEccCCcCCCCCCchhhhcCCCCC
Q psy2947 73 IGRRIFKCDTVEVLSLKSNSLTS------------------LPPDIG--RLTNLRVLCLTDNCLQNASIPFTLTFCKNLT 132 (441)
Q Consensus 73 i~~~~~~l~~L~~L~l~~n~l~~------------------lp~~~~--~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~ 132 (441)
||..++++++|++|+|++|.++. +|..++ ++++|++|++++|.+. +.+|..++++++|+
T Consensus 198 ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~-~~~p~~l~~l~~L~ 276 (636)
T 4eco_A 198 VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNL-TKLPTFLKALPEMQ 276 (636)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTC-SSCCTTTTTCSSCC
T ss_pred CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCC-ccChHHHhcCCCCC
Confidence 34455566666666666666665 666666 6666666666666666 56666666666666
Q ss_pred EEEccCCC-CC--ccchhhcCC------CCCCEEEccCCcCccCcccccccccccc--cccccchhHHH-Hhhcccc-cC
Q psy2947 133 HLYLDNNL-LD--ALPGFLLSM------PQLDTVYRHGNHNYFKSTFMWYHSDIHA--RIRSTSTRDEV-LRKQKKL-HQ 199 (441)
Q Consensus 133 ~L~l~~n~-l~--~lp~~~~~l------~~L~~L~l~~N~~~~~~~~~~~~~~~p~--~l~~l~~~~~~-l~~~~~~-~~ 199 (441)
+|++++|+ ++ .+|..++.+ ++|+.|++++|.+. .+|. .+..++.+..+ +.+|.+. .+
T Consensus 277 ~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~----------~ip~~~~l~~l~~L~~L~L~~N~l~g~i 346 (636)
T 4eco_A 277 LINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK----------TFPVETSLQKMKKLGMLECLYNQLEGKL 346 (636)
T ss_dssp EEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS----------SCCCHHHHTTCTTCCEEECCSCCCEEEC
T ss_pred EEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC----------ccCchhhhccCCCCCEEeCcCCcCccch
Confidence 66666666 64 366555554 66666666666642 4565 66677666666 7777775 77
Q ss_pred CchhhhhhhhcccccccccCCCCCCCchhhhHHH-hhhcCCcccc
Q psy2947 200 PSRLQDLAVQSVIASKENFFEPGLFPGPLVDYIA-REYNQYHVCH 243 (441)
Q Consensus 200 p~~l~~l~~l~~l~l~~n~~~~~~~p~~~~~~l~-~~~~~~~~~~ 243 (441)
| .+..+++|+.|++++|.+. .+|..+..... .....+..+.
T Consensus 347 p-~~~~l~~L~~L~L~~N~l~--~lp~~l~~l~~~L~~L~Ls~N~ 388 (636)
T 4eco_A 347 P-AFGSEIKLASLNLAYNQIT--EIPANFCGFTEQVENLSFAHNK 388 (636)
T ss_dssp C-CCEEEEEESEEECCSSEEE--ECCTTSEEECTTCCEEECCSSC
T ss_pred h-hhCCCCCCCEEECCCCccc--cccHhhhhhcccCcEEEccCCc
Confidence 7 7777788888888877766 36666554333 3334444443
No 56
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.77 E-value=1.7e-18 Score=157.07 Aligned_cols=174 Identities=21% Similarity=0.267 Sum_probs=140.0
Q ss_pred cCCCC--CccC---CCCccCCCC---CCCC-CCcccEEeccCCCcC----cccCCCCCCCEEEccCCCCCcCCcC-ccCC
Q psy2947 38 ACQRN--CSLE---VGGICSHIW---IPQY-FSHAFLLSLSYTPIG----RRIFKCDTVEVLSLKSNSLTSLPPD-IGRL 103 (441)
Q Consensus 38 ~C~~~--c~~~---~~~~c~~~~---~~~~-l~~L~~l~l~~n~i~----~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l 103 (441)
+||.. |.|. ..+.|+..+ +|.. .++|+.|++++|.+. ..+..+++|++|+|++|.++.+++. |..+
T Consensus 3 ~Cp~~~gC~C~~~~~~l~~~~~~l~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 82 (251)
T 3m19_A 3 TCETVTGCTCNEGKKEVDCQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDL 82 (251)
T ss_dssp -CHHHHSSEEEGGGTEEECTTCCCSSCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTC
T ss_pred cCCCCCceEcCCCCeEEecCCCCccccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccC
Confidence 57776 8883 235676532 3332 358999999999543 4578899999999999999977765 8999
Q ss_pred CCCcEEEccCCcCCCCCCc-hhhhcCCCCCEEEccCCCCCccch-hhcCCCCCCEEEccCCcCccCcccccccccccccc
Q psy2947 104 TNLRVLCLTDNCLQNASIP-FTLTFCKNLTHLYLDNNLLDALPG-FLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARI 181 (441)
Q Consensus 104 ~~L~~L~l~~n~l~~~~~p-~~~~~l~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l 181 (441)
++|++|++++|.++ .+| ..+..+++|++|+|++|+|+.+|. .+..+++|+.|+|++|.+.... +..+
T Consensus 83 ~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~---------~~~~ 151 (251)
T 3m19_A 83 TELGTLGLANNQLA--SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIP---------AGAF 151 (251)
T ss_dssp TTCCEEECTTSCCC--CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC---------TTTT
T ss_pred CcCCEEECCCCccc--ccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccC---------HHHc
Confidence 99999999999998 555 557899999999999999999884 5788999999999999964322 3357
Q ss_pred cccchhHHH-HhhcccccCCc-hhhhhhhhcccccccccCCCC
Q psy2947 182 RSTSTRDEV-LRKQKKLHQPS-RLQDLAVQSVIASKENFFEPG 222 (441)
Q Consensus 182 ~~l~~~~~~-l~~~~~~~~p~-~l~~l~~l~~l~l~~n~~~~~ 222 (441)
..++.+..+ +++|.+..+|+ .+..++.|+.+++++|++.+.
T Consensus 152 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 152 DKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 777777777 88999988875 688899999999999999864
No 57
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=99.77 E-value=4.8e-19 Score=147.41 Aligned_cols=141 Identities=28% Similarity=0.470 Sum_probs=102.3
Q ss_pred ecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHHHHH
Q psy2947 260 TFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVV 337 (441)
Q Consensus 260 l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~ 337 (441)
+++.++..++++|..+|.+ |.| +..++..+++.++.. .+...+.
T Consensus 4 ls~~~~~~l~~~F~~~D~d~~G~i-~~~el~~~l~~~g~~---------------------------------~~~~~~~ 49 (151)
T 1w7j_B 4 FNKDQLEEFKEAFELFDRVGDGKI-LYSQCGDVMRALGQN---------------------------------PTNAEVL 49 (151)
T ss_dssp -------CHHHHHHHHCCSSSSEE-ESTTHHHHHHHTTCC---------------------------------CCHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcC-cHHHHHHHHHHcCCC---------------------------------CCHHHHH
Confidence 3455556666666666654 555 455566655555433 3445566
Q ss_pred HHHHhhcCC--CCCcccHHHHHHHHHhhccC--CCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHH
Q psy2947 338 DAFKAADTT--KSGKLSFPDFLKVMHTHSKA--EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIF 413 (441)
Q Consensus 338 ~~f~~~D~d--~~g~i~~~ef~~~~~~~~~~--~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~ 413 (441)
.+|+.+|.+ ++|.|+++||..++...... ....+.+..+|+.+|.+++|.|+.+||++++..+|.++++++++.++
T Consensus 50 ~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~ 129 (151)
T 1w7j_B 50 KVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVL 129 (151)
T ss_dssp HHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHH
T ss_pred HHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHH
Confidence 677778888 88899999998888765321 11235677899999999999999999999999999999999999999
Q ss_pred HHhCCCCCCceeHHHHHHHHhc
Q psy2947 414 REANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 414 ~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+.+| |++|.|+|+||+++|.+
T Consensus 130 ~~~d-~~dg~i~~~eF~~~~~~ 150 (151)
T 1w7j_B 130 AGHE-DSNGCINYEAFLKHILS 150 (151)
T ss_dssp TTCC-CTTSEEEHHHHHHHTC-
T ss_pred Hhcc-CCCCeEeHHHHHHHHhc
Confidence 9999 99999999999998864
No 58
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=99.77 E-value=2.4e-18 Score=157.05 Aligned_cols=170 Identities=16% Similarity=0.223 Sum_probs=137.6
Q ss_pred HHHHHhhhccccC--CCccCHHHHHHHHHHc---------CCCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhc---
Q psy2947 266 LEFRECFFLFARN--GTIKTLDELSVIMRSL---------GMSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHS--- 327 (441)
Q Consensus 266 ~~l~~~f~~~d~~--G~i~~~~el~~~~~~~---------~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~--- 327 (441)
..+..+|..+|.+ |.| +.+|+..++... .......++..++. +++|.|+.+||..++....
T Consensus 58 ~~~~~l~~~~D~~~~g~i-~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~ 136 (263)
T 2f33_A 58 PEMKTFVDQYGQRDDGKI-GIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKA 136 (263)
T ss_dssp HHHHHHHHHHTTGGGCCB-CHHHHHHHTTSCTTHHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcC-cHHHHHHHHhhhhhHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhc
Confidence 5566777777865 788 899998886532 23445666777664 6899999999999998763
Q ss_pred CCCCCHHHHHH----HHHhhcCCCCCcccHHHHHHHHHh-------hccCCCChHHHHHHHHHhCCCCCCcccHHHHHHH
Q psy2947 328 KAEDIPKEVVD----AFKAADTTKSGKLSFPDFLKVMHT-------HSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHV 396 (441)
Q Consensus 328 ~~~~~~~~~~~----~f~~~D~d~~g~i~~~ef~~~~~~-------~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~ 396 (441)
+...+.+.+.. +|+.+|.+++|.|+++||..++.. ........+.++.+|+.+|+|++|.|+.+||+++
T Consensus 137 g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~ 216 (263)
T 2f33_A 137 NKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDAL 216 (263)
T ss_dssp TSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSHHHHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 33455666655 999999999999999999988754 1123344678999999999999999999999999
Q ss_pred HHHhCC----CCCHHHHHHHHHH-hCCCCCCceeHHHHHHHHhcc
Q psy2947 397 LVNWGE----GLSSKEVDQIFRE-ANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 397 l~~~~~----~l~~~~~~~l~~~-~d~d~dg~i~~~ef~~~l~~~ 436 (441)
++.++. .+++++++.+++. +|.|+||.|+|+||+.+|.+.
T Consensus 217 l~~~~~~~~~~~~~~e~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 261 (263)
T 2f33_A 217 LKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALILSAG 261 (263)
T ss_dssp HHHHHHHCTTTCCTTTHHHHHHHHHTTSBTTEECGGGTHHHHCCS
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHhhccCCCCeEcHHHHHHHHhcc
Confidence 998876 7999999999997 799999999999999999765
No 59
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=99.76 E-value=6.2e-18 Score=145.22 Aligned_cols=122 Identities=14% Similarity=0.289 Sum_probs=101.1
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCc
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGT 387 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~ 387 (441)
.+++|.|+.+||..++.... .....+..+|+.+|.|++|.|+++||..++...... ..+.++.+|+.+|.|++|+
T Consensus 50 ~d~~G~i~~~El~~~l~~~g---~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~--~~~~~~~~F~~~D~d~~G~ 124 (180)
T 3mse_B 50 TNHNGSLSHREIYTVLASVG---IKKWDINRILQALDINDRGNITYTEFMAGCYRWKNI--ESTFLKAAFNKIDKDEDGY 124 (180)
T ss_dssp TTCSSSEEHHHHHHHHHHTT---CCHHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTTC----CHHHHHHHHHCTTCSSC
T ss_pred CCCCCcCCHHHHHHHHHHcC---CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhcccC--CHHHHHHHHHHHCCCCCCC
Confidence 45677777777777776553 235778999999999999999999999988765322 2367899999999999999
Q ss_pred ccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCC--------CceeHHHHHHHHhcc
Q psy2947 388 VPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN--------SKVRYEDFVKIACAP 436 (441)
Q Consensus 388 is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~d--------g~i~~~ef~~~l~~~ 436 (441)
|+.+||++++. +..+++++++.+|+.+|.|+| |.|+|+||+.+|.+.
T Consensus 125 I~~~El~~~l~--~~~~~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~~ 179 (180)
T 3mse_B 125 ISKSDIVSLVH--DKVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLST 179 (180)
T ss_dssp BCHHHHHHHTT--TSSCCHHHHHHHHHHHHTC---------CCCBCHHHHHHHHHTT
T ss_pred CCHHHHHHHHc--CCCCCHHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHHhc
Confidence 99999999998 667999999999999999988 999999999999765
No 60
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.76 E-value=2.6e-18 Score=149.15 Aligned_cols=137 Identities=20% Similarity=0.293 Sum_probs=114.3
Q ss_pred CcCCCCCccCCC-CccCCCC---CCCC-CCcccEEeccCC---CcCcccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCc
Q psy2947 37 TACQRNCSLEVG-GICSHIW---IPQY-FSHAFLLSLSYT---PIGRRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLR 107 (441)
Q Consensus 37 ~~C~~~c~~~~~-~~c~~~~---~~~~-l~~L~~l~l~~n---~i~~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~ 107 (441)
.+||..|.|... +.|+..+ +|.. .++|+.|++++| .+|..+..+++|+.|+|++|.|+.+++. |..+++|+
T Consensus 2 ~~CP~~C~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~ 81 (193)
T 2wfh_A 2 SRCPTECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLL 81 (193)
T ss_dssp --CCTTCEEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCCCCCCEeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCC
Confidence 369999999533 6677632 3332 358999999999 5677888999999999999999988765 99999999
Q ss_pred EEEccCCcCCCCCCchhhhcCCCCCEEEccCCCCCccch-hhcCCCCCCEEEccCCcCccCccccccc
Q psy2947 108 VLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLDALPG-FLLSMPQLDTVYRHGNHNYFKSTFMWYH 174 (441)
Q Consensus 108 ~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 174 (441)
+|++++|+|+ +..|..+..+++|++|+|++|+|+.+|. .|..+++|+.|++++|++.|.|.+.|+.
T Consensus 82 ~L~Ls~N~l~-~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~l~ 148 (193)
T 2wfh_A 82 TLILSYNRLR-CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLS 148 (193)
T ss_dssp EEECCSSCCC-BCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHHHH
T ss_pred EEECCCCccC-EeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCHHHH
Confidence 9999999998 4444578999999999999999999984 6888999999999999999999876643
No 61
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=99.76 E-value=4.1e-18 Score=147.63 Aligned_cols=146 Identities=18% Similarity=0.291 Sum_probs=110.6
Q ss_pred cccchHHHHHhhhccccC--CCccCHHHHH-----HHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCH
Q psy2947 261 FKTPYLEFRECFFLFARN--GTIKTLDELS-----VIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIP 333 (441)
Q Consensus 261 ~~~~~~~l~~~f~~~d~~--G~i~~~~el~-----~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~ 333 (441)
++.++.+++++|..+|.+ |.| +.+|+. .+++.++..++..++..
T Consensus 11 ~~~~~~~l~~~F~~~D~d~~G~i-~~~El~~~~~~~~l~~~g~~~~~~~~~~---------------------------- 61 (191)
T 1uhk_A 11 NPRWIGRHKHMFNFLDVNHNGKI-SLDEMVYKASDIVINNLGATPEQAKRHK---------------------------- 61 (191)
T ss_dssp CHHHHHHHHHHHHHHCTTCCSEE-EHHHHHHHHHHHHHHTSCCCHHHHHHHH----------------------------
T ss_pred CHHHHHHHHHHHhhccCCCCCcC-cHHHHHHHHHHHHHHHcCCCchhHHHHH----------------------------
Confidence 455667777777777764 666 677776 45555553322221100
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHhhccC------CCChHHH----HHHHHHhCCCCCCcccHHHHHHHHHHhCCC
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKA------EDIPKEV----VDAFKAADTTKSGTVPAKYLKHVLVNWGEG 403 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~------~~~~~~~----~~~f~~~D~~~~G~is~~ef~~~l~~~~~~ 403 (441)
..+..+|+.+|.|++|.|+++||..++...... ....+.+ +.+|+.+|.|++|.|+.+||+++++.+|.+
T Consensus 62 ~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~ 141 (191)
T 1uhk_A 62 DAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGII 141 (191)
T ss_dssp HHHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHhCcCCCCcCcHHHHHHHHHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCC
Confidence 146778889999999999999999887654211 1111233 389999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 404 LSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 404 l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+++++++.+++.+|.|++|.|+|+||++++..
T Consensus 142 ~~~~~~~~~~~~~D~d~dG~i~~~eF~~~~~~ 173 (191)
T 1uhk_A 142 QSSEDCEETFRVCDIDESGQLDVDEMTRQHLG 173 (191)
T ss_dssp CSHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 99999999999999999999999999999865
No 62
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=99.76 E-value=6.2e-18 Score=147.31 Aligned_cols=142 Identities=26% Similarity=0.390 Sum_probs=115.4
Q ss_pred cceecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHH
Q psy2947 257 KVFTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPK 334 (441)
Q Consensus 257 ~~~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~ 334 (441)
...++..++..++++|..+|.+ |.| +..++..+++.++..++..++..++...+
T Consensus 48 ~~~ls~~~~~~l~~~F~~~D~d~~G~i-~~~el~~~l~~lg~~~~~~~~~~l~~~~~----------------------- 103 (196)
T 3dtp_E 48 FAMFTQHQVQEFKEAFQLIDQDKDGFI-SKNDIRATFDSLGRLCTEQELDSMVAEAP----------------------- 103 (196)
T ss_dssp SCSSCTTTHHHHHHHHHHHCCSCSSBC-CHHHHHHHHHTTSCCCCHHHHHHHHTTSS-----------------------
T ss_pred hhhCCHHHHHHHHHHHHHHCCCCCCcC-CHHHHHHHHHHhCCCCCHHHHHHHHHHcc-----------------------
Confidence 3456788899999999999976 888 89999999998887777777766665434
Q ss_pred HHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHH
Q psy2947 335 EVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFR 414 (441)
Q Consensus 335 ~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~ 414 (441)
|.|+++||..++..........+.+..+|+.+|.|++|+|+.+||+.++ .+|..+++++++.+|.
T Consensus 104 --------------g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~ 168 (196)
T 3dtp_E 104 --------------GPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALS 168 (196)
T ss_dssp --------------SCCBHHHHHHHHHHCCCSSCCHHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHH
T ss_pred --------------CCCcHHHHHHHHHHHhcCCCcHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHH
Confidence 5555555555554433333446788899999999999999999999999 9999999999999999
Q ss_pred HhCCCCCCceeHHHHHHHHhccC
Q psy2947 415 EANVTMNSKVRYEDFVKIACAPV 437 (441)
Q Consensus 415 ~~d~d~dg~i~~~ef~~~l~~~~ 437 (441)
.+|.|++|.|+|+||+.+|.+.-
T Consensus 169 ~~D~d~dG~I~~~EF~~~l~~~~ 191 (196)
T 3dtp_E 169 EAPIDGNGLIDIKKFAQILTKGA 191 (196)
T ss_dssp SSCEETTEECHHHHHHHHHSSCC
T ss_pred HcCCCCCCEEeHHHHHHHHHcCC
Confidence 99999999999999999997653
No 63
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=99.76 E-value=6.9e-18 Score=146.12 Aligned_cols=127 Identities=22% Similarity=0.356 Sum_probs=110.2
Q ss_pred Hh-CCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCC
Q psy2947 308 AE-KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSG 386 (441)
Q Consensus 308 ~~-~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G 386 (441)
.+ ++|.|+.+||..++........+...+..+|+.+|.|++|.|+++||..++..... ....+.++.+|+.+|.|++|
T Consensus 36 ~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~-~~~~~~~~~~f~~~D~d~~G 114 (190)
T 1g8i_A 36 KDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSR-GTLDEKLRWAFKLYDLDNDG 114 (190)
T ss_dssp HHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHH-CCHHHHHHHHHHHHCTTCSS
T ss_pred HhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcC-CCHHHHHHHHHHhhcCCCCC
Confidence 45 89999999999999987544456778999999999999999999999998887633 23467899999999999999
Q ss_pred cccHHHHHHHHHHh----C--------CCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 387 TVPAKYLKHVLVNW----G--------EGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 387 ~is~~ef~~~l~~~----~--------~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.|+.+||+.++..+ | ...+++++..+|+.+|.|++|.|+++||++++.+
T Consensus 115 ~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~~ 175 (190)
T 1g8i_A 115 YITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA 175 (190)
T ss_dssp EEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred eECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh
Confidence 99999999999873 3 3467889999999999999999999999998854
No 64
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=99.76 E-value=4.3e-18 Score=144.89 Aligned_cols=119 Identities=12% Similarity=0.139 Sum_probs=106.9
Q ss_pred HhCCCcccHHHHHHHHHhhc-----CCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCC
Q psy2947 308 AEKGGKLSFPDFLKVMHTHS-----KAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADT 382 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~-----~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~ 382 (441)
.+++|.|+.+|+..+++... ....+.++++.+|+.+|.|++|.|+++||..++... ..++.+|+.||
T Consensus 15 ~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~-------~~l~~aF~~fD- 86 (174)
T 2i7a_A 15 VPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRL-------VHYQHVFQKVQ- 86 (174)
T ss_dssp CC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHH-------HHHHHHHHHHC-
T ss_pred CCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH-------HHHHHHHHHhc-
Confidence 46899999999999998762 335668899999999999999999999999988754 57899999999
Q ss_pred CCCCcccHHHHHHHHHHh----CCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 383 TKSGTVPAKYLKHVLVNW----GEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 383 ~~~G~is~~ef~~~l~~~----~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
|++|+|+.+||+.+++.+ |..+++++++.+++.+| |++|.|+|+||+.++.+
T Consensus 87 d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~ 142 (174)
T 2i7a_A 87 TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMR 142 (174)
T ss_dssp SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHH
Confidence 999999999999999999 99999999999999999 99999999999998753
No 65
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=99.76 E-value=1e-17 Score=161.06 Aligned_cols=127 Identities=31% Similarity=0.565 Sum_probs=108.2
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCc
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGT 387 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~ 387 (441)
.+++|.|+.+||..++.... ...+.+++..+|+.+|.|++|.|+++||..++..........+.++.+|+.+|.|++|.
T Consensus 323 ~D~dG~Is~~EL~~~L~~lg-~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~fD~D~dG~ 401 (450)
T 3sg6_A 323 KDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY 401 (450)
T ss_dssp TTCSSEECHHHHHHHHHHTT-CCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------CHHHHHHHHHHHCTTCSSE
T ss_pred CCCCCcCcHHHHHHHHHHhC-CCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccchhhHHHHHHHHhCCCCCCe
Confidence 46777777777777777643 34667889999999999999999999999999876555556788999999999999999
Q ss_pred ccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 388 VPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 388 is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
|+.+||++++..+|..+++++++.++..+|.|+||.|+|+||+.+|..
T Consensus 402 Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~~ 449 (450)
T 3sg6_A 402 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 449 (450)
T ss_dssp ECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC-
T ss_pred EeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999865
No 66
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=99.76 E-value=5.6e-18 Score=148.32 Aligned_cols=100 Identities=17% Similarity=0.258 Sum_probs=90.1
Q ss_pred HHHHHHhhcCCCCCcccHHHHHHHHHhhcc----------------CCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 336 VVDAFKAADTTKSGKLSFPDFLKVMHTHSK----------------AEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 336 ~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~----------------~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
+..+|+.+|.|++|.|+++||..++..... .....+.++.+|+.+|.|++|.|+.+||+.++..
T Consensus 63 ~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~ 142 (202)
T 2bec_A 63 GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRL 142 (202)
T ss_dssp HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 778889999999999999999999887643 3344678999999999999999999999999999
Q ss_pred h-CCCCCHHHHHHHHHH----hCCCCCCceeHHHHHHHHhc
Q psy2947 400 W-GEGLSSKEVDQIFRE----ANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 400 ~-~~~l~~~~~~~l~~~----~d~d~dg~i~~~ef~~~l~~ 435 (441)
+ |..+++++++.+++. +|.|++|.|+|+||+.++.+
T Consensus 143 ~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 183 (202)
T 2bec_A 143 MVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEK 183 (202)
T ss_dssp SCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTT
T ss_pred hcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 9 999999999999998 99999999999999998864
No 67
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=99.76 E-value=7.7e-18 Score=142.26 Aligned_cols=148 Identities=14% Similarity=0.125 Sum_probs=110.4
Q ss_pred hHHHHHhhhccccC--CCccCHHHHHHHHH----HcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHHHHHH
Q psy2947 265 YLEFRECFFLFARN--GTIKTLDELSVIMR----SLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVVD 338 (441)
Q Consensus 265 ~~~l~~~f~~~d~~--G~i~~~~el~~~~~----~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 338 (441)
++++++.|..+|.+ |.| +.+|+..++. .++..++..++..+... ....+..
T Consensus 3 ~~~l~~~F~~~D~d~dG~i-~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~----------------------~~~~~~~ 59 (166)
T 3akb_A 3 ERRIAARFTTFDQDGNGHI-DRSDFSGAAKAMLAEFGVAARSDRGQALYGG----------------------AEALWQG 59 (166)
T ss_dssp HHHHHHHHHHHCTTCSSEE-CHHHHHHHHHHHHHHHTCCTTSHHHHHHHHH----------------------HHHHHHH
T ss_pred HHHHHHHHhHHcCCCCCCc-CHHHHHHHHHHHHHHcCCCCCCHHHHHHHHH----------------------HHHHHHH
Confidence 45666677776654 566 6677766533 33444444443333210 0133567
Q ss_pred HHHhhcCCCCCcccHHHHHHHHHhhccCCCC------hHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHH
Q psy2947 339 AFKAADTTKSGKLSFPDFLKVMHTHSKAEDI------PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQI 412 (441)
Q Consensus 339 ~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~------~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l 412 (441)
+|+.+|.|++|.|+++||..++......... .+.++.+|+.+|.+++|.|+.+||+.++..+| +++++++.+
T Consensus 60 ~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~~~~~~~~~ 137 (166)
T 3akb_A 60 LAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQA 137 (166)
T ss_dssp HHHHHCTTSSSCEEHHHHHHTHHHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT--CCHHHHHHH
T ss_pred HHHHhCCCCCCcCcHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CCHHHHHHH
Confidence 7999999999999999999987765322210 23488999999999999999999999999998 899999999
Q ss_pred HHHhCCCCCCceeHHHHHHHHhccC
Q psy2947 413 FREANVTMNSKVRYEDFVKIACAPV 437 (441)
Q Consensus 413 ~~~~d~d~dg~i~~~ef~~~l~~~~ 437 (441)
|+.+|.|++|.|+|+||+.++..-+
T Consensus 138 ~~~~D~d~dg~i~~~ef~~~~~~~~ 162 (166)
T 3akb_A 138 AAALDTDGDGKVGETEIVPAFARYF 162 (166)
T ss_dssp HHHHCTTCSSBCCHHHHHHHHHHHT
T ss_pred HHHhCCCCCCcCcHHHHHHHHHHHh
Confidence 9999999999999999999986543
No 68
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=99.76 E-value=3.9e-18 Score=147.78 Aligned_cols=126 Identities=17% Similarity=0.308 Sum_probs=103.6
Q ss_pred HhCCCcccHHHHHHHHHhhc----------CCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHH
Q psy2947 308 AEKGGKLSFPDFLKVMHTHS----------KAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAF 377 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~----------~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f 377 (441)
.+++|.|+++||..++.... ....+...+..+|+.+|.|++|.|+++||..++.... .....+.++.+|
T Consensus 51 ~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~-~~~~~~~~~~~F 129 (191)
T 3khe_A 51 NNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQ-LLLSRERLLAAF 129 (191)
T ss_dssp TTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHH-HHCCHHHHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhc-ccchHHHHHHHH
Confidence 45667777777766665441 1113356789999999999999999999999875442 223357899999
Q ss_pred HHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhcc
Q psy2947 378 KAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 378 ~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~ 436 (441)
+.+|.|++|.|+.+||++++. +..+++++++.+|+.+|.|++|.|+|+||++++.+-
T Consensus 130 ~~~D~d~~G~I~~~E~~~~l~--~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 186 (191)
T 3khe_A 130 QQFDSDGSGKITNEELGRLFG--VTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKI 186 (191)
T ss_dssp HHHCTTCSSEECHHHHHHHTT--SSCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHCCCCcCcCCHHHHHHHHc--cCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 999999999999999999998 888999999999999999999999999999998653
No 69
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=99.76 E-value=2.4e-17 Score=139.39 Aligned_cols=146 Identities=14% Similarity=0.260 Sum_probs=123.7
Q ss_pred hhhccccC--CCccCHHHHHHHHHHcCC-----CcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCCCHHHHHHH
Q psy2947 271 CFFLFARN--GTIKTLDELSVIMRSLGM-----SPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDA 339 (441)
Q Consensus 271 ~f~~~d~~--G~i~~~~el~~~~~~~~~-----~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~ 339 (441)
.|..+|.+ |.| +.+|++.+++.++. .++..++..++. +++|.|+++||..++... +.++.+
T Consensus 4 ~F~~~D~d~~G~i-~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-------~~~~~~ 75 (165)
T 1k94_A 4 TYFSAVAGQDGEV-DAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL-------NAWKEN 75 (165)
T ss_dssp HHHHHHHGGGTSB-CHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-------HHHHHH
T ss_pred HHHHHhCCCCCcC-CHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------HHHHHH
Confidence 46677765 889 89999999999886 567787777664 688999999999988753 679999
Q ss_pred HHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC
Q psy2947 340 FKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVT 419 (441)
Q Consensus 340 f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d 419 (441)
|+.+|.|++|.|+.+||..++... +.....++++.+|+.+ +++|.|+++||..++... +.+..+|+.+|.|
T Consensus 76 F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d 146 (165)
T 1k94_A 76 FMTVDQDGSGTVEHHELRQAIGLM-GYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVKL------RALTDFFRKRDHL 146 (165)
T ss_dssp HHHHCTTCCSBCCHHHHHHHHHHT-TCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHHH------HHHHHHHHTTCTT
T ss_pred HHHhCCCCCceECHHHHHHHHHHh-CCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCC
Confidence 999999999999999999999876 3445678899999999 899999999999999875 6788999999999
Q ss_pred CCCceeHHHHHHHHh
Q psy2947 420 MNSKVRYEDFVKIAC 434 (441)
Q Consensus 420 ~dg~i~~~ef~~~l~ 434 (441)
++|.|+.+ |.+++.
T Consensus 147 ~~G~i~~~-~~~~l~ 160 (165)
T 1k94_A 147 QQGSANFI-YDDFLQ 160 (165)
T ss_dssp CCSEEEEE-HHHHHH
T ss_pred CCCeEeee-HHHHHH
Confidence 99998776 666554
No 70
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=99.76 E-value=2.8e-17 Score=139.19 Aligned_cols=145 Identities=19% Similarity=0.306 Sum_probs=123.1
Q ss_pred hhhccccC--CCccCHHHHHHHHHHcCC-----CcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCCCHHHHHHH
Q psy2947 271 CFFLFARN--GTIKTLDELSVIMRSLGM-----SPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDA 339 (441)
Q Consensus 271 ~f~~~d~~--G~i~~~~el~~~~~~~~~-----~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~ 339 (441)
.|..+|.+ |.| +.+|+..+++.++. .++..++..++. +++|.|+++||..++... +.++.+
T Consensus 6 ~F~~~D~d~~G~i-~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-------~~~~~~ 77 (167)
T 1gjy_A 6 GYFASVAGQDGQI-DADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL-------NGWRQH 77 (167)
T ss_dssp HHHHHHCCTTSCB-CHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH-------HHHHHH
T ss_pred HHHHHHcCCCCcC-CHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH-------HHHHHH
Confidence 46677765 889 89999999999886 567777777664 689999999999998754 689999
Q ss_pred HHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC
Q psy2947 340 FKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVT 419 (441)
Q Consensus 340 f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d 419 (441)
|+.+|.|++|.|+.+||..++... +.....+++..+|+.+ +++|.|+++||..++... +.+..+|+.+|.|
T Consensus 78 F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d 148 (167)
T 1gjy_A 78 FISFDSDRSGTVDPQELQKALTTM-GFRLNPQTVNSIAKRY--STSGKITFDDYIACCVKL------RALTDSFRRRDSA 148 (167)
T ss_dssp HHHHCTTCCSEECHHHHHHHHHTT-TCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHHH------HHHHHHHHHHCTT
T ss_pred HHHhCCCCCCcCCHHHHHHHHHHc-CCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHHH------HHHHHHHHHhCCC
Confidence 999999999999999999999876 3445678899999999 899999999999999775 6788999999999
Q ss_pred CCCceeHH--HHHHH
Q psy2947 420 MNSKVRYE--DFVKI 432 (441)
Q Consensus 420 ~dg~i~~~--ef~~~ 432 (441)
++|.|+.+ +|+.+
T Consensus 149 ~~G~i~~~~~~~l~~ 163 (167)
T 1gjy_A 149 QQGMVNFSYDDFIQC 163 (167)
T ss_dssp CCSEEEEEHHHHHHH
T ss_pred CCeeEEeeHHHHHHH
Confidence 99999965 45443
No 71
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=99.76 E-value=4.2e-18 Score=142.04 Aligned_cols=141 Identities=28% Similarity=0.490 Sum_probs=112.0
Q ss_pred ceecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHHH
Q psy2947 258 VFTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKE 335 (441)
Q Consensus 258 ~~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 335 (441)
..++..++..++++|..+|.+ |.| +..++..+++.++..++..++..++...+|.|+++||..+
T Consensus 8 ~~l~~~~~~~l~~~F~~~D~d~~G~i-~~~el~~~l~~~g~~~~~~~~~~~~~~~~g~i~~~eF~~~------------- 73 (153)
T 2ovk_B 8 VKLSQRQMQELKEAFTMIDQDRDGFI-GMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAFLTL------------- 73 (153)
T ss_dssp TTCCHHHHHHHHHHHHHHCCSTTTCC-CHHHHHHHTTTTTSCCCHHHHHHHHHHSSSCCCSHHHHHT-------------
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCeE-CHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCHHHHHHH-------------
Confidence 346677888899999888875 778 7888888888888777777766666554555555555444
Q ss_pred HHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHH
Q psy2947 336 VVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFRE 415 (441)
Q Consensus 336 ~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~ 415 (441)
+..........+.+..+|+.+|++++|.|+.+||++++..+|.++++++++.+++.
T Consensus 74 ------------------------~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~ 129 (153)
T 2ovk_B 74 ------------------------FGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKD 129 (153)
T ss_dssp ------------------------TTTTTTTCCCTTHHHHHHHTTCSSCSSCCCHHHHHHHHHHSSSCCCHHHHHHHHHH
T ss_pred ------------------------HHHHhccCChHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 43332233335678899999999999999999999999999999999999999999
Q ss_pred hCCCCCCceeHHHHHHHHhccC
Q psy2947 416 ANVTMNSKVRYEDFVKIACAPV 437 (441)
Q Consensus 416 ~d~d~dg~i~~~ef~~~l~~~~ 437 (441)
+|. ++|.|+|+||+++|.+.-
T Consensus 130 ~d~-~dg~I~~~eF~~~~~~~~ 150 (153)
T 2ovk_B 130 APL-KNKQFNYNKMVDIKGKAE 150 (153)
T ss_dssp CCE-ETTEECHHHHHHHHHCSC
T ss_pred cCC-CCCEEeHHHHHHHHhcCc
Confidence 999 999999999999998763
No 72
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=99.75 E-value=1.4e-17 Score=145.94 Aligned_cols=126 Identities=18% Similarity=0.293 Sum_probs=107.2
Q ss_pred Hh-CCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCC
Q psy2947 308 AE-KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSG 386 (441)
Q Consensus 308 ~~-~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G 386 (441)
.+ ++|.|+.+||..++..... ....+.+..+|+.+|.|++|.|+++||..++..... ....+.++.+|+.+|.|++|
T Consensus 33 ~~~~~G~i~~~e~~~~l~~~~~-~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G 110 (204)
T 1jba_A 33 EECPSGTLFMHEFKRFFKVPDN-EEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLR-GTLEHKLKWTFKIYDKDRNG 110 (204)
T ss_dssp SSSTTCCEEHHHHHHHHHCCSS-STTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSS-CCCTHHHHHHHHHHCSSCSS
T ss_pred hhCCCCCcCHHHHHHHHHHhcC-CCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHcc-CCHHHHHHHHHHHhCCCCCC
Confidence 56 7888999999888886544 466788999999999999999999999999987643 34567899999999999999
Q ss_pred cccHHHHHHHHHHh----C-------------CCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 387 TVPAKYLKHVLVNW----G-------------EGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 387 ~is~~ef~~~l~~~----~-------------~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.|+.+||+.++..+ | ...++++++.+|+.+|.|++|.|+|+||++++.+
T Consensus 111 ~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~ 176 (204)
T 1jba_A 111 CIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR 176 (204)
T ss_dssp CBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTT
T ss_pred cCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHc
Confidence 99999999999876 3 1155678999999999999999999999998864
No 73
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=99.75 E-value=1.9e-17 Score=150.52 Aligned_cols=149 Identities=17% Similarity=0.225 Sum_probs=121.6
Q ss_pred HHHHHHHHHHcCCCcCHHHHHHHH----H-hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHH
Q psy2947 284 LDELSVIMRSLGMSPTIAELKKYL----A-EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLK 358 (441)
Q Consensus 284 ~~el~~~~~~~~~~~~~~~~~~~~----~-~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~ 358 (441)
.++++.+.+..+ .+..++..++ . +++|.|+++||..++............+..+|+.+|.|++|.|+++||..
T Consensus 76 ~e~l~~l~~~~~--~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~ 153 (256)
T 2jul_A 76 PEGLDQLQAQTK--FTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVV 153 (256)
T ss_dssp CTHHHHHHHHTT--SCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHH
T ss_pred HHHHHHHHHHhC--CCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHH
Confidence 344555554432 3344443333 2 37999999999999998866667788999999999999999999999999
Q ss_pred HHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh----C--------CCCCHHHHHHHHHHhCCCCCCceeH
Q psy2947 359 VMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW----G--------EGLSSKEVDQIFREANVTMNSKVRY 426 (441)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~----~--------~~l~~~~~~~l~~~~d~d~dg~i~~ 426 (441)
++.... .....+.++.+|+.+|.|++|.|+.+||+.++..+ | ...++++++.+|+.+|.|+||.|++
T Consensus 154 ~l~~~~-~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~ 232 (256)
T 2jul_A 154 GLSILL-RGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTI 232 (256)
T ss_dssp HHHHHH-SCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCH
T ss_pred HHHHHh-ccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeH
Confidence 998764 33446789999999999999999999999999876 5 3457889999999999999999999
Q ss_pred HHHHHHHhc
Q psy2947 427 EDFVKIACA 435 (441)
Q Consensus 427 ~ef~~~l~~ 435 (441)
+||++++.+
T Consensus 233 ~Ef~~~~~~ 241 (256)
T 2jul_A 233 DEFLETCQK 241 (256)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999865
No 74
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=99.75 E-value=1.8e-17 Score=143.87 Aligned_cols=150 Identities=19% Similarity=0.339 Sum_probs=118.0
Q ss_pred CHHHHHHHHHHcCCCcCHHHHHHH----HHh-CCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHH
Q psy2947 283 TLDELSVIMRSLGMSPTIAELKKY----LAE-KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFL 357 (441)
Q Consensus 283 ~~~el~~~~~~~~~~~~~~~~~~~----~~~-~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~ 357 (441)
+..+++.+.+... .+..++..+ ..+ ++|.|+.+||..++............+..+|+.+|.|++|.|+++||.
T Consensus 9 ~~~~l~~l~~~~~--~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~ 86 (193)
T 1bjf_A 9 RPEVMQDLLESTD--FTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFI 86 (193)
T ss_dssp CHHHHHHHHHHSS--CCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHH
T ss_pred CHHHHHHHHHHcC--CCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence 4555555544422 233333332 346 899999999999998775545567789999999999999999999999
Q ss_pred HHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh----C--CCCC------HHHHHHHHHHhCCCCCCcee
Q psy2947 358 KVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW----G--EGLS------SKEVDQIFREANVTMNSKVR 425 (441)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~----~--~~l~------~~~~~~l~~~~d~d~dg~i~ 425 (441)
.++.... .....+.++.+|+.+|.|++|.|+++||+.++..+ | .+++ .+.+..+|+.+|.|++|.|+
T Consensus 87 ~~~~~~~-~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~ 165 (193)
T 1bjf_A 87 IALSVTS-RGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLS 165 (193)
T ss_dssp HHHHHHT-SSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEEC
T ss_pred HHHHHHc-CCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEe
Confidence 9988763 33446789999999999999999999999999874 4 2344 35589999999999999999
Q ss_pred HHHHHHHHhc
Q psy2947 426 YEDFVKIACA 435 (441)
Q Consensus 426 ~~ef~~~l~~ 435 (441)
++||++++..
T Consensus 166 ~~Ef~~~~~~ 175 (193)
T 1bjf_A 166 LEEFIRGAKS 175 (193)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999998853
No 75
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=99.75 E-value=8.3e-18 Score=150.23 Aligned_cols=126 Identities=18% Similarity=0.276 Sum_probs=107.9
Q ss_pred hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcc
Q psy2947 309 EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTV 388 (441)
Q Consensus 309 ~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~i 388 (441)
+++|.|+.+||..++............+..+|+.+|.|++|.|+++||..++..... ....+.++.+|+.+|.|++|+|
T Consensus 77 d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~-~~~~~~l~~~F~~~D~d~dG~I 155 (229)
T 3dd4_A 77 CPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLR-GTVQEKLNWAFNLYDINKDGYI 155 (229)
T ss_dssp CCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHH-SCHHHHHHHHHHHHCTTCSSCC
T ss_pred CCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcC-CChHHHHHHHHHHhCCCCCCeE
Confidence 578899999999988877655566778899999999999999999999999887643 2336789999999999999999
Q ss_pred cHHHHHHHHHHh------------CCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 389 PAKYLKHVLVNW------------GEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 389 s~~ef~~~l~~~------------~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+.+||+.++..+ +..+++++++.+|+.+|.|+||.|+|+||++++.+
T Consensus 156 s~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~ 214 (229)
T 3dd4_A 156 TKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQK 214 (229)
T ss_dssp BHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh
Confidence 999999999986 55677889999999999999999999999998864
No 76
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=99.75 E-value=3.8e-17 Score=138.09 Aligned_cols=124 Identities=17% Similarity=0.258 Sum_probs=112.7
Q ss_pred HHHHHHHhCCCcccHHHHHHHHHhhcCC----CCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHH
Q psy2947 302 ELKKYLAEKGGKLSFPDFLKVMHTHSKA----EDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAF 377 (441)
Q Consensus 302 ~~~~~~~~~~g~i~~~ef~~~~~~~~~~----~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f 377 (441)
.+..++.+++|.|+.+||..++...... ..+.+++..+|+.+|.|++|.|+++||..++... +.++.+|
T Consensus 4 ~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-------~~~~~~F 76 (165)
T 1k94_A 4 TYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL-------NAWKENF 76 (165)
T ss_dssp HHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-------HHHHHHH
T ss_pred HHHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------HHHHHHH
Confidence 3566778999999999999999986542 4678899999999999999999999999988764 6789999
Q ss_pred HHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 378 KAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 378 ~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
+.+|.+++|.|+.+||+.+++.+|..+++++++.+++.+ |++|.|+|+||+.++.
T Consensus 77 ~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~ 131 (165)
T 1k94_A 77 MTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCV 131 (165)
T ss_dssp HHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHH
T ss_pred HHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHH
Confidence 999999999999999999999999999999999999999 8899999999999875
No 77
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=99.75 E-value=1.1e-17 Score=137.33 Aligned_cols=89 Identities=29% Similarity=0.511 Sum_probs=74.2
Q ss_pred CCCCcccHHHHHHHHHhhccCC--CChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCc
Q psy2947 346 TKSGKLSFPDFLKVMHTHSKAE--DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSK 423 (441)
Q Consensus 346 d~~g~i~~~ef~~~~~~~~~~~--~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~ 423 (441)
+++|.|+++||..++....... ...+.++.+|+.+|++++|.|+.+||+++++.+|.++++++++.+++.+|. ++|.
T Consensus 49 ~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~ 127 (140)
T 1ggw_A 49 TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGM 127 (140)
T ss_dssp TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCC
T ss_pred CCCCcCcHHHHHHHHHHHhcccCcccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCc
Confidence 5666666666666665543221 224788999999999999999999999999999999999999999999999 9999
Q ss_pred eeHHHHHHHHhc
Q psy2947 424 VRYEDFVKIACA 435 (441)
Q Consensus 424 i~~~ef~~~l~~ 435 (441)
|+|+||+.+|.+
T Consensus 128 i~~~eF~~~~~~ 139 (140)
T 1ggw_A 128 VNYHDFVQMILA 139 (140)
T ss_dssp STTTHHHHHHHC
T ss_pred EeHHHHHHHHhc
Confidence 999999999865
No 78
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=99.75 E-value=1.7e-17 Score=144.75 Aligned_cols=129 Identities=17% Similarity=0.332 Sum_probs=102.2
Q ss_pred HHHh-CCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCC
Q psy2947 306 YLAE-KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384 (441)
Q Consensus 306 ~~~~-~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~ 384 (441)
++.+ ++|.|+++||..++..........+.+..+|+.+|.|++|.|+++||..++..... ....+.++.+|+.+|.|+
T Consensus 23 fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~-~~~~~~~~~~F~~~D~d~ 101 (198)
T 2r2i_A 23 FMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLK-GKVDQKLRWYFKLYDVDG 101 (198)
T ss_dssp HHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSS-CCHHHHHHHHHHHHCTTC
T ss_pred HHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHcc-CchHHHHHHHHHHhcCCC
Confidence 3355 78888888888888654322222356889999999999999999999998887643 334678889999999999
Q ss_pred CCcccHHHHHHHHHHhC------CCCCHHH-HHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 385 SGTVPAKYLKHVLVNWG------EGLSSKE-VDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 385 ~G~is~~ef~~~l~~~~------~~l~~~~-~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+|.|+++||+.++..++ ..++.++ +..+|+.+|.|++|.|+|+||+.++.+
T Consensus 102 ~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 159 (198)
T 2r2i_A 102 NGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQK 159 (198)
T ss_dssp SSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHTT
T ss_pred CCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 99999999999998875 4556544 889999999999999999999988853
No 79
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=99.75 E-value=2e-17 Score=141.02 Aligned_cols=123 Identities=15% Similarity=0.232 Sum_probs=111.0
Q ss_pred HHHHHHhCCCcccHHHHHHHHHhhcC-------CCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHH
Q psy2947 303 LKKYLAEKGGKLSFPDFLKVMHTHSK-------AEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVD 375 (441)
Q Consensus 303 ~~~~~~~~~g~i~~~ef~~~~~~~~~-------~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 375 (441)
+..++ +++|.|+.+||..++....+ ...+.+.+..+|+.+|.|++|.|+++||..++... +.++.
T Consensus 10 F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-------~~~~~ 81 (173)
T 1alv_A 10 FAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI-------KKWQA 81 (173)
T ss_dssp HHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH-------HHHHH
T ss_pred HHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHHH-------HHHHH
Confidence 34455 88999999999999988622 34568899999999999999999999999988754 67899
Q ss_pred HHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 376 AFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 376 ~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
+|+.+|.+++|.|+.+||+.++..+|..+++++++.+++.+| |++|.|+|+||+.++.
T Consensus 82 ~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~ 139 (173)
T 1alv_A 82 IYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLV 139 (173)
T ss_dssp HHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 9999999999998875
No 80
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.75 E-value=1.3e-18 Score=164.13 Aligned_cols=179 Identities=18% Similarity=0.188 Sum_probs=152.5
Q ss_pred CCcccEEeccCC---CcCcccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhc---------
Q psy2947 60 FSHAFLLSLSYT---PIGRRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTF--------- 127 (441)
Q Consensus 60 l~~L~~l~l~~n---~i~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~--------- 127 (441)
+++|+.|+|++| .+|..+..+++|++|+|++|.++.+|..++.+++|++|++++|.+. +.+|..+..
T Consensus 103 l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~-~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRACPEL-TELPEPLASTDASGEHQG 181 (328)
T ss_dssp GTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTC-CCCCSCSEEEC-CCCEEE
T ss_pred CCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCCc-cccChhHhhccchhhhcc
Confidence 789999999999 5678888999999999999999999999999999999999998877 789987765
Q ss_pred CCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-Hhhccc-ccCCchhhh
Q psy2947 128 CKNLTHLYLDNNLLDALPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKK-LHQPSRLQD 205 (441)
Q Consensus 128 l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~-~~~p~~l~~ 205 (441)
+++|++|++++|+|+.+|..++.+++|+.|++++|.+. .+|..+..++.+..+ +.+|.+ ..+|..+..
T Consensus 182 l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~----------~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~ 251 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLS----------ALGPAIHHLPKLEELDLRGCTALRNYPPIFGG 251 (328)
T ss_dssp STTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCC----------CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTC
T ss_pred CCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCC----------cCchhhccCCCCCEEECcCCcchhhhHHHhcC
Confidence 99999999999999999999999999999999999963 356667788888777 777655 778889999
Q ss_pred hhhhcccccccccCCCCCCCchhhhHHHhhhcCCcccccccCCCc
Q psy2947 206 LAVQSVIASKENFFEPGLFPGPLVDYIAREYNQYHVCHYCNSAEP 250 (441)
Q Consensus 206 l~~l~~l~l~~n~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~ 250 (441)
++.|+.|++++|... +.+|..+..........+..|...+..|.
T Consensus 252 l~~L~~L~L~~n~~~-~~~p~~~~~l~~L~~L~L~~n~~~~~iP~ 295 (328)
T 4fcg_A 252 RAPLKRLILKDCSNL-LTLPLDIHRLTQLEKLDLRGCVNLSRLPS 295 (328)
T ss_dssp CCCCCEEECTTCTTC-CBCCTTGGGCTTCCEEECTTCTTCCCCCG
T ss_pred CCCCCEEECCCCCch-hhcchhhhcCCCCCEEeCCCCCchhhccH
Confidence 999999999998665 56888776655556666777776666554
No 81
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=99.75 E-value=3.8e-18 Score=146.93 Aligned_cols=151 Identities=16% Similarity=0.176 Sum_probs=113.5
Q ss_pred cccchHHHHHhhhcc-ccC--CCccCHHHHHHHHHHcC----CCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCH
Q psy2947 261 FKTPYLEFRECFFLF-ARN--GTIKTLDELSVIMRSLG----MSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIP 333 (441)
Q Consensus 261 ~~~~~~~l~~~f~~~-d~~--G~i~~~~el~~~~~~~~----~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~ 333 (441)
++.+..+++.+|..+ |.+ |.| +.+|+..++..++ ..++..++..+. ..+.
T Consensus 3 s~~~~~~l~~~F~~~~D~d~dG~i-~~~E~~~~l~~~~~~~~~~~~~~~~~~l~-------------~~~~--------- 59 (185)
T 2sas_A 3 NDFQKQKIKFTFDFFLDMNHDGSI-QDNDFEDMMTRYKEVNKGSLSDADYKSMQ-------------ASLE--------- 59 (185)
T ss_dssp CHHHHHHHHHHHHHHTCTTCSSEE-CHHHHHHHHHHHHHHHGGGSCHHHHHHHH-------------HHHH---------
T ss_pred CHHHHHHHHHHHHHheeCCCCCeE-cHHHHHHHHHHHHHhhcCCCCHHHHHHHH-------------HHHH---------
Confidence 345667777777777 654 666 6777777776654 333333322221 1111
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHhhccC--------CCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCC
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKA--------EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLS 405 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~--------~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~ 405 (441)
..|..+|+.+|.|++|.|+++||..++...... ....+.++.+|+.+|.|++|.|+.+||+++++.+| ++
T Consensus 60 ~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g--~~ 137 (185)
T 2sas_A 60 DEWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQ 137 (185)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC--CC
T ss_pred HHHHHHHHhcCCCCCCeEcHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhC--CC
Confidence 224567999999999999999999988765322 22346889999999999999999999999998887 67
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHHhcc
Q psy2947 406 SKEVDQIFREANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 406 ~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~ 436 (441)
++++..+|+.+|.|++|.|+|+||+.++...
T Consensus 138 ~~~~~~~~~~~D~d~dG~i~~~ef~~~~~~~ 168 (185)
T 2sas_A 138 CADVPAVYNVITDGGKVTFDLNRYKELYYRL 168 (185)
T ss_dssp CSSHHHHHHHHHTTTTSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 8899999999999999999999999988653
No 82
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=99.74 E-value=4e-17 Score=138.29 Aligned_cols=124 Identities=18% Similarity=0.277 Sum_probs=112.4
Q ss_pred HHHHHHHhCCCcccHHHHHHHHHhhcCC----CCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHH
Q psy2947 302 ELKKYLAEKGGKLSFPDFLKVMHTHSKA----EDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAF 377 (441)
Q Consensus 302 ~~~~~~~~~~g~i~~~ef~~~~~~~~~~----~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f 377 (441)
.+..++.+++|.|+.+||..++...... ..+.+.+..+|+.+|.|++|.|+++||..++... +.++.+|
T Consensus 6 ~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-------~~~~~~F 78 (167)
T 1gjy_A 6 GYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL-------NGWRQHF 78 (167)
T ss_dssp HHHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH-------HHHHHHH
T ss_pred HHHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH-------HHHHHHH
Confidence 4566778899999999999999986542 4678899999999999999999999999988764 6789999
Q ss_pred HHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 378 KAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 378 ~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
+.+|.+++|.|+.+||+.++..+|..+++++++.+++.+ |++|.|+|+||+.++.
T Consensus 79 ~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~ 133 (167)
T 1gjy_A 79 ISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCV 133 (167)
T ss_dssp HHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHH
T ss_pred HHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHH
Confidence 999999999999999999999999999999999999999 8899999999999874
No 83
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.74 E-value=5.2e-18 Score=162.33 Aligned_cols=179 Identities=23% Similarity=0.238 Sum_probs=138.8
Q ss_pred CCcCCCCCccCCC-CccCCC---CCCCCC-CcccEEeccCCCcC---c-ccC-CCCCCCEEEccCCCCCcCCcC-ccCCC
Q psy2947 36 QTACQRNCSLEVG-GICSHI---WIPQYF-SHAFLLSLSYTPIG---R-RIF-KCDTVEVLSLKSNSLTSLPPD-IGRLT 104 (441)
Q Consensus 36 ~~~C~~~c~~~~~-~~c~~~---~~~~~l-~~L~~l~l~~n~i~---~-~~~-~l~~L~~L~l~~n~l~~lp~~-~~~l~ 104 (441)
..+||..|.|... +.|+.. .+|..+ ..++.|+|++|.|. . .+. .+++|+.|+|++|+|+.+++. |..++
T Consensus 9 ~~~Cp~~C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~ 88 (361)
T 2xot_A 9 VVSCPANCLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVP 88 (361)
T ss_dssp CTTCCTTCEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred CCCCCCCCEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCC
Confidence 4569999999643 667763 344433 46899999999653 3 344 899999999999999988765 99999
Q ss_pred CCcEEEccCCcCCCCCCch-hhhcCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCcCccCccccccccccccccc
Q psy2947 105 NLRVLCLTDNCLQNASIPF-TLTFCKNLTHLYLDNNLLDAL-PGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIR 182 (441)
Q Consensus 105 ~L~~L~l~~n~l~~~~~p~-~~~~l~~L~~L~l~~n~l~~l-p~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~ 182 (441)
+|+.|+|++|+|+ .+|. .+..+++|++|+|++|+|+.+ |..|..+++|+.|+|++|.+..... .+...+.
T Consensus 89 ~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~------~~~~~~~ 160 (361)
T 2xot_A 89 NLRYLDLSSNHLH--TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPV------ELIKDGN 160 (361)
T ss_dssp TCCEEECCSSCCC--EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCG------GGTC---
T ss_pred CCCEEECCCCcCC--cCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCH------HHhcCcc
Confidence 9999999999998 5554 579999999999999999887 4789999999999999999754321 1111114
Q ss_pred ccchhHHH-HhhcccccCC-chhhhhhh--hcccccccccCCCC
Q psy2947 183 STSTRDEV-LRKQKKLHQP-SRLQDLAV--QSVIASKENFFEPG 222 (441)
Q Consensus 183 ~l~~~~~~-l~~~~~~~~p-~~l~~l~~--l~~l~l~~n~~~~~ 222 (441)
.++.+..+ +++|.+..+| ..+..++. +..+++++|++.+.
T Consensus 161 ~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 161 KLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp -CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred cCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 56666666 8889998888 45677776 47899999999874
No 84
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=99.74 E-value=2e-18 Score=149.38 Aligned_cols=139 Identities=24% Similarity=0.409 Sum_probs=107.8
Q ss_pred ecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHHHHH
Q psy2947 260 TFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVV 337 (441)
Q Consensus 260 l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~ 337 (441)
+++.++..++++|..+|.+ |.| +.+|+..+++.++. ..+..++.
T Consensus 4 ls~~~~~~l~~~F~~~D~d~dG~I-~~~E~~~~l~~~g~---------------------------------~~~~~~~~ 49 (188)
T 1s6i_A 4 LSEEEIGGLKELFKMIDTDNSGTI-TFDELKDGLKRVGS---------------------------------ELMESEIK 49 (188)
T ss_dssp SSCTTTCSHHHHHHTTSSSSSSCE-EHHHHHHHHTTTTC---------------------------------CCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcC-CHHHHHHHHHHcCC---------------------------------CCCHHHHH
Confidence 3445556666666666653 555 55555555554442 24456677
Q ss_pred HHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Q psy2947 338 DAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREAN 417 (441)
Q Consensus 338 ~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d 417 (441)
.+|+.+|.|++|.|+++||..++..... ....+.++.+|+.+|.|++|.|+.+||+.++..+| +++++++.+|+.+|
T Consensus 50 ~l~~~~D~d~dG~I~~~EF~~~~~~~~~-~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g--~~~~~~~~~~~~~D 126 (188)
T 1s6i_A 50 DLMDAADIDKSGTIDYGEFIAATVHLNK-LEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEID 126 (188)
T ss_dssp HHHHHTCTTCSSEECHHHHHHHHTTSSS-SCCCCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTT--CCTTHHHHHHHHHC
T ss_pred HHHHHcCCCCCCeEeHHHHHHHHHHHhc-cCHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHC
Confidence 8888899999999999999998875532 22245688999999999999999999999998887 77889999999999
Q ss_pred CCCCCceeHHHHHHHHhc
Q psy2947 418 VTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 418 ~d~dg~i~~~ef~~~l~~ 435 (441)
.|++|.|+|+||+.++.+
T Consensus 127 ~d~dG~Is~~EF~~~~~~ 144 (188)
T 1s6i_A 127 QDNDGQIDYGEFAAMMRK 144 (188)
T ss_dssp SSSSSEEETTHHHHTTSC
T ss_pred CCCCCcEeHHHHHHHHHH
Confidence 999999999999999854
No 85
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=99.74 E-value=4.8e-17 Score=145.01 Aligned_cols=129 Identities=19% Similarity=0.319 Sum_probs=107.0
Q ss_pred HHHHh--CCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCC
Q psy2947 305 KYLAE--KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADT 382 (441)
Q Consensus 305 ~~~~~--~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~ 382 (441)
.++.+ ++|.|+.+||..++.. ........+..+|+.+|.|++|.|+++||..++..........+.++.+|+.+|.
T Consensus 56 ~~D~d~~~~G~I~~~El~~~l~~--~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~ 133 (226)
T 2zfd_A 56 KISSAVIDDGLINKEEFQLALFK--TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDL 133 (226)
T ss_dssp HHHTSSSCSSSBCHHHHHHHHHS--CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCT
T ss_pred HhCcccCCCCeEcHHHHHHHHhc--cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHHHHHHHHHhCC
Confidence 34456 7888888888888865 2233445678899999999999999999999998775444556789999999999
Q ss_pred CCCCcccHHHHHHHHH----HhCCCCCHHHHHHH----HHHhCCCCCCceeHHHHHHHHhc
Q psy2947 383 TKSGTVPAKYLKHVLV----NWGEGLSSKEVDQI----FREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 383 ~~~G~is~~ef~~~l~----~~~~~l~~~~~~~l----~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
|++|.|+.+||+.++. ..|.++++++++.+ |+.+|.|+||.|+|+||+.++.+
T Consensus 134 d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~ 194 (226)
T 2zfd_A 134 KQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLR 194 (226)
T ss_dssp TSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHH
T ss_pred CCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 9999999999999996 56888998887655 45999999999999999999864
No 86
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.74 E-value=2.5e-19 Score=188.42 Aligned_cols=208 Identities=15% Similarity=0.098 Sum_probs=131.8
Q ss_pred CCCCCccCeeEEeeccccCCCCCcCCCCCCCCCCCcCCCCCccCCCCccCCC-------------C----CC---CCCCc
Q psy2947 3 DPAKNNEGFQATRNKQGVGFSRRSSFKNKNSTPQTACQRNCSLEVGGICSHI-------------W----IP---QYFSH 62 (441)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~c~~~~~~~c~~~-------------~----~~---~~l~~ 62 (441)
+.+.+.|..||++||+++. +|. .+++|+.. ..| |+| .||.|... + ++ ..+++
T Consensus 7 ~~~~~~~~~all~~k~~~~-~~~-~l~~W~~~--~~~---C~w-~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~ 78 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLP-DKN-LLPDWSSN--KNP---CTF-DGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTG 78 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCS-CTT-SSTTCCTT--SCG---GGS-TTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTT
T ss_pred ccCCHHHHHHHHHHHhhCC-Ccc-cccCCCCC--CCC---cCC-cceEECCCcEEEEECCCCCcCCccCccChhHhccCc
Confidence 3445788999999999997 555 78889742 235 665 68888520 0 11 23455
Q ss_pred ccEEeccCC---CcCcccCCCCCCCEEEccCCCCC-cCCc--CccCCCCCcEEEccCCcCCCCCCchhh-hcCCCCCEEE
Q psy2947 63 AFLLSLSYT---PIGRRIFKCDTVEVLSLKSNSLT-SLPP--DIGRLTNLRVLCLTDNCLQNASIPFTL-TFCKNLTHLY 135 (441)
Q Consensus 63 L~~l~l~~n---~i~~~~~~l~~L~~L~l~~n~l~-~lp~--~~~~l~~L~~L~l~~n~l~~~~~p~~~-~~l~~L~~L~ 135 (441)
|+.++++.| .+|..+..+++|++|+|++|.++ .+|. .++.+++|++|++++|.+. +.+|..+ ..+++|++|+
T Consensus 79 L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~-~~~~~~~~~~l~~L~~L~ 157 (768)
T 3rgz_A 79 LESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD-FPGKVSGGLKLNSLEVLD 157 (768)
T ss_dssp CCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEE-CCSSCCSCCCCTTCSEEE
T ss_pred ccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccC-CcCCHHHhccCCCCCEEE
Confidence 566666665 23456777778888888888777 5666 6777788888888888776 5666655 6777778888
Q ss_pred ccCCCCCccc-hh---hcCCCCCCEEEccCCcCccCcccc-------------cccccccccccccchhHHH-Hhhcccc
Q psy2947 136 LDNNLLDALP-GF---LLSMPQLDTVYRHGNHNYFKSTFM-------------WYHSDIHARIRSTSTRDEV-LRKQKKL 197 (441)
Q Consensus 136 l~~n~l~~lp-~~---~~~l~~L~~L~l~~N~~~~~~~~~-------------~~~~~~p~~l~~l~~~~~~-l~~~~~~ 197 (441)
+++|.++..+ .. +.++++|++|++++|.+.....+. .+.+.+|. +..++.+..+ +.+|.+.
T Consensus 158 Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~ 236 (768)
T 3rgz_A 158 LSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLS 236 (768)
T ss_dssp CCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCC
T ss_pred CCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCC
Confidence 8777775443 33 566777777777777643211110 01222333 5555555555 5666653
Q ss_pred -cCCchhhhhhhhcccccccccCC
Q psy2947 198 -HQPSRLQDLAVQSVIASKENFFE 220 (441)
Q Consensus 198 -~~p~~l~~l~~l~~l~l~~n~~~ 220 (441)
.+|..+..++.|+.|+++.|.+.
T Consensus 237 ~~~~~~l~~l~~L~~L~Ls~n~l~ 260 (768)
T 3rgz_A 237 GDFSRAISTCTELKLLNISSNQFV 260 (768)
T ss_dssp SCHHHHTTTCSSCCEEECCSSCCE
T ss_pred CcccHHHhcCCCCCEEECCCCccc
Confidence 44566667777777777766553
No 87
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=99.73 E-value=1.1e-17 Score=142.47 Aligned_cols=144 Identities=15% Similarity=0.177 Sum_probs=109.1
Q ss_pred ccchHHHHHhhhccccC--CCccCHHHHHHHHHHcC----CCcCHHH-HHHHHHhCCCcccHHHHHHHHHhhcCCCCCHH
Q psy2947 262 KTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLG----MSPTIAE-LKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPK 334 (441)
Q Consensus 262 ~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~----~~~~~~~-~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~ 334 (441)
+.++.+++++|..+|.+ |.| +.+|+..+++.++ ..++..+ +..+.. .
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i-~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~-------------------------~ 55 (174)
T 1q80_A 2 DLWVQKMKTYFNRIDFDKDGAI-TRMDFESMAERFAKESEMKAEHAKVLMDSLT-------------------------G 55 (174)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEE-SHHHHHHHHHHHHHHSSCCTTHHHHHHHHHH-------------------------H
T ss_pred HHHHHHHHHHHHhcCCCCCCcE-eHHHHHHHHHHHHHHhCCCCCcHHHHHHHHH-------------------------H
Confidence 34566677777777764 666 6777777766655 4444433 222221 2
Q ss_pred HHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCC----ChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHH
Q psy2947 335 EVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAED----IPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVD 410 (441)
Q Consensus 335 ~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~----~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~ 410 (441)
.+..+|+.+| ++|.|+++||..++........ ..+.++.+|+.+|+|++|.|+.+||++++..+| +++++++
T Consensus 56 ~~~~l~~~~D--~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g--~~~~~~~ 131 (174)
T 1q80_A 56 VWDNFLTAVA--GGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LDKTMAP 131 (174)
T ss_dssp HHHHTGGGTT--TTSCEEHHHHHHHHHHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHT--CCGGGHH
T ss_pred HHHHHHHhcC--CCCeEcHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcC--CCHHHHH
Confidence 3456788888 8999999999998877643211 135788999999999999999999999999997 8889999
Q ss_pred HHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 411 QIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 411 ~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.+|+.+|.|++|.|+|+||+.++.+
T Consensus 132 ~~~~~~D~d~dg~i~~~ef~~~~~~ 156 (174)
T 1q80_A 132 ASFDAIDTNNDGLLSLEEFVIAGSD 156 (174)
T ss_dssp HHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHhCCCCCceEeHHHHHHHHHH
Confidence 9999999999999999999998854
No 88
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.73 E-value=8.1e-18 Score=155.59 Aligned_cols=173 Identities=21% Similarity=0.267 Sum_probs=132.2
Q ss_pred cCCCCCccCCC----CccCCCC---CCC-CCCcccEEeccCCCcC----cccCCCCCCCEEEccCCCCCcC-CcCccCCC
Q psy2947 38 ACQRNCSLEVG----GICSHIW---IPQ-YFSHAFLLSLSYTPIG----RRIFKCDTVEVLSLKSNSLTSL-PPDIGRLT 104 (441)
Q Consensus 38 ~C~~~c~~~~~----~~c~~~~---~~~-~l~~L~~l~l~~n~i~----~~~~~l~~L~~L~l~~n~l~~l-p~~~~~l~ 104 (441)
+||..|.|... +.|+..+ +|. ..++|+.|++++|.+. ..+..+++|++|++++|.++.+ |..|..++
T Consensus 1 ~CP~~C~C~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 80 (285)
T 1ozn_A 1 PCPGACVCYNEPKVTTSCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLA 80 (285)
T ss_dssp CCCTTCEEECSSSCEEECCSSCCSSCCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred CcCCCceECCCCCeEEEcCcCCcccCCcCCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCcc
Confidence 59999999542 5687643 343 3468999999999553 4577889999999999999966 56699999
Q ss_pred CCcEEEccCCc-CCCCCCchhhhcCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCcCccCccccccccccccccc
Q psy2947 105 NLRVLCLTDNC-LQNASIPFTLTFCKNLTHLYLDNNLLDAL-PGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIR 182 (441)
Q Consensus 105 ~L~~L~l~~n~-l~~~~~p~~~~~l~~L~~L~l~~n~l~~l-p~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~ 182 (441)
+|++|++++|. +. ...|..+..+++|++|++++|+++.+ |..+..+++|++|++++|.+.... +..+.
T Consensus 81 ~L~~L~l~~n~~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---------~~~~~ 150 (285)
T 1ozn_A 81 LLEQLDLSDNAQLR-SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALP---------DDTFR 150 (285)
T ss_dssp TCCEEECCSCTTCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC---------TTTTT
T ss_pred CCCEEeCCCCCCcc-ccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccC---------HhHhc
Confidence 99999999997 76 33366788999999999999999877 467888999999999999864322 23455
Q ss_pred ccchhHHH-HhhcccccCCc-hhhhhhhhcccccccccCC
Q psy2947 183 STSTRDEV-LRKQKKLHQPS-RLQDLAVQSVIASKENFFE 220 (441)
Q Consensus 183 ~l~~~~~~-l~~~~~~~~p~-~l~~l~~l~~l~l~~n~~~ 220 (441)
.++.+..+ +.+|.+..+|. .+..++.|+.+++++|.+.
T Consensus 151 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 151 DLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred cCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 56666666 77777766664 4777888888888887654
No 89
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=4.1e-17 Score=141.56 Aligned_cols=109 Identities=27% Similarity=0.325 Sum_probs=56.6
Q ss_pred cCCCCCccCCC-CccCCCCCCCCCCcccEEeccCCCcCcccCCCCCCCEEEccCCCCCcCCcC--ccCCCCCcEEEccCC
Q psy2947 38 ACQRNCSLEVG-GICSHIWIPQYFSHAFLLSLSYTPIGRRIFKCDTVEVLSLKSNSLTSLPPD--IGRLTNLRVLCLTDN 114 (441)
Q Consensus 38 ~C~~~c~~~~~-~~c~~~~~~~~l~~L~~l~l~~n~i~~~~~~l~~L~~L~l~~n~l~~lp~~--~~~l~~L~~L~l~~n 114 (441)
+||..|.|... +.|+..++. .||..+. .+|+.|++++|+|+.++.. |..+++|++|++++|
T Consensus 1 ~CP~~C~C~~~~l~~s~~~l~--------------~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N 64 (192)
T 1w8a_A 1 DCPAMCHCEGTTVDCTGRGLK--------------EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRN 64 (192)
T ss_dssp CCCTTSEEETTEEECTTSCCS--------------SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSS
T ss_pred CcCCCCEECCCEEEcCCCCcC--------------cCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCC
Confidence 59999999532 334432110 2333332 2555555555555544432 555555555555555
Q ss_pred cCCCCCCchhhhcCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCc
Q psy2947 115 CLQNASIPFTLTFCKNLTHLYLDNNLLDALP-GFLLSMPQLDTVYRHGNH 163 (441)
Q Consensus 115 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~ 163 (441)
.|+ +..|..+..+++|++|+|++|+|+.++ ..|.++++|++|+|++|+
T Consensus 65 ~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 113 (192)
T 1w8a_A 65 QLT-GIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQ 113 (192)
T ss_dssp CCC-CBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSC
T ss_pred CCC-CcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCc
Confidence 555 333445555555555555555555444 334555555555555555
No 90
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=99.73 E-value=1.8e-17 Score=145.16 Aligned_cols=125 Identities=16% Similarity=0.210 Sum_probs=96.3
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCc
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGT 387 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~ 387 (441)
.+++|.|+.+||..++... +...+.+++..+|+.+|.|++|.|+++||..++..... ....+.++.+|+.+|.|++|.
T Consensus 48 ~d~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~ 125 (204)
T 3e3r_A 48 RDGSRSLDADEFRQGLAKL-GLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMS-QAREAVIAAAFAKLDRSGDGV 125 (204)
T ss_dssp TTCCSSBCHHHHHHHHHTT-TCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCC-HHHHHHHHHHHHHHCTTCSSE
T ss_pred cCCCCCcCHHHHHHHHHHc-CCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcC-chHHHHHHHHHHHhCcCCCCe
Confidence 5677777777777777655 23356777888888888888888888888887764421 122456788888888888899
Q ss_pred ccHHHHHHHHH-------HhCCCCCHHHHHHHHHHhCC-CCCCceeHHHHHHHHh
Q psy2947 388 VPAKYLKHVLV-------NWGEGLSSKEVDQIFREANV-TMNSKVRYEDFVKIAC 434 (441)
Q Consensus 388 is~~ef~~~l~-------~~~~~l~~~~~~~l~~~~d~-d~dg~i~~~ef~~~l~ 434 (441)
|+.+||++++. ..|...++++++.+|+.+|. |+||.|+|+||+.++.
T Consensus 126 I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~ 180 (204)
T 3e3r_A 126 VTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYS 180 (204)
T ss_dssp ECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHH
T ss_pred EeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHH
Confidence 99998888887 34566777888888888887 8888899998888875
No 91
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=99.73 E-value=1.9e-17 Score=142.55 Aligned_cols=100 Identities=21% Similarity=0.323 Sum_probs=86.8
Q ss_pred HHHHHhhcCCCCCc-ccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCC-----CCCHHHHH
Q psy2947 337 VDAFKAADTTKSGK-LSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGE-----GLSSKEVD 410 (441)
Q Consensus 337 ~~~f~~~D~d~~g~-i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~-----~l~~~~~~ 410 (441)
..+|+.+|.|++|. |+++||..++..........+.++.+|+.+|.|++|.|+.+||+.++..++. .+++++++
T Consensus 63 ~~l~~~~D~d~~G~~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~ 142 (183)
T 1dgu_A 63 ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMK 142 (183)
T ss_dssp HHHHHHHSCSSSSCCCCHHHHHHHHHHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHH
T ss_pred HHHHHHhCCCCCCCEecHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHH
Confidence 35677889999999 9999999998877544444568999999999999999999999999999876 67888887
Q ss_pred H----HHHHhCCCCCCceeHHHHHHHHhcc
Q psy2947 411 Q----IFREANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 411 ~----l~~~~d~d~dg~i~~~ef~~~l~~~ 436 (441)
. +|+.+|.|++|.|+|+||+.++.+.
T Consensus 143 ~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 172 (183)
T 1dgu_A 143 QLIDNILEESDIDRDGTINLSEFQHVISRS 172 (183)
T ss_dssp HHHHHHHHHHCTTSSSEEEHHHHHHHHCSS
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHhC
Confidence 5 9999999999999999999998653
No 92
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.73 E-value=5.3e-17 Score=142.79 Aligned_cols=124 Identities=27% Similarity=0.343 Sum_probs=99.5
Q ss_pred CCCCCcc-CCCCccCCCCC---CC-CCCcccEEeccCCCc---Cc-ccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcE
Q psy2947 39 CQRNCSL-EVGGICSHIWI---PQ-YFSHAFLLSLSYTPI---GR-RIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRV 108 (441)
Q Consensus 39 C~~~c~~-~~~~~c~~~~~---~~-~l~~L~~l~l~~n~i---~~-~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~ 108 (441)
||..|.| |.++.|...+. |. ..++|+.|++++|.+ +. .+..+++|++|++++|+++.+|.. |..+++|++
T Consensus 1 Cp~~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 80 (208)
T 2o6s_A 1 CPSRCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTY 80 (208)
T ss_dssp CCTTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CcCCCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCE
Confidence 8889998 45678876432 32 245789999999844 33 356789999999999999988776 788999999
Q ss_pred EEccCCcCCCCCCch-hhhcCCCCCEEEccCCCCCccch-hhcCCCCCCEEEccCCcC
Q psy2947 109 LCLTDNCLQNASIPF-TLTFCKNLTHLYLDNNLLDALPG-FLLSMPQLDTVYRHGNHN 164 (441)
Q Consensus 109 L~l~~n~l~~~~~p~-~~~~l~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~l~~N~~ 164 (441)
|++++|.++ .+|. .+..+++|++|++++|+|+.+|. .+..+++|+.|++++|.+
T Consensus 81 L~Ls~n~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 136 (208)
T 2o6s_A 81 LNLSTNQLQ--SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQL 136 (208)
T ss_dssp EECCSSCCC--CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCC--ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCcc
Confidence 999999998 5554 46889999999999999988874 578889999999999985
No 93
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=99.73 E-value=1.6e-16 Score=131.28 Aligned_cols=124 Identities=15% Similarity=0.280 Sum_probs=106.9
Q ss_pred HHHHHhC-CCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCC
Q psy2947 304 KKYLAEK-GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADT 382 (441)
Q Consensus 304 ~~~~~~~-~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~ 382 (441)
..++.++ +|.|+.+||..++.... ...+...+..+|+.+|.+ |+++||..++..........+.++.+|+.+|+
T Consensus 21 ~~~D~d~~~G~i~~~el~~~l~~~g-~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~ 95 (146)
T 2qac_A 21 IYFNEKSSGGKISIDNASYNARKLG-LAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNVEELIKMFAHFDN 95 (146)
T ss_dssp HHHHHHCBTTBEEHHHHHHHHHHTT-CCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHHHHHHHHHTTCT
T ss_pred HHhCccCCCCcccHHHHHHHHHHhC-CCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHHHHHHHHHHhCC
Confidence 3444677 88888888888877653 346677888899999987 99999999988765555557889999999999
Q ss_pred CCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 383 TKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 383 ~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
|++|.|+.+||++++..+|.++++++++.+++.+ |++|.|+|+||+.+|.
T Consensus 96 d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~ 145 (146)
T 2qac_A 96 NCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDIL 145 (146)
T ss_dssp TCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence 9999999999999999999999999999999999 8999999999999885
No 94
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=99.72 E-value=1.2e-16 Score=139.28 Aligned_cols=123 Identities=20% Similarity=0.287 Sum_probs=112.2
Q ss_pred HHHHHHhCCCcccHHHHHHHHHhhcC----CCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHH
Q psy2947 303 LKKYLAEKGGKLSFPDFLKVMHTHSK----AEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFK 378 (441)
Q Consensus 303 ~~~~~~~~~g~i~~~ef~~~~~~~~~----~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~ 378 (441)
+..++.+++|.|+.+||..++..... ...+.+++..+|+.+|.|++|.|+++||..++... +.++.+|+
T Consensus 38 F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~-------~~~~~~F~ 110 (198)
T 1juo_A 38 YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL-------NGWRQHFI 110 (198)
T ss_dssp HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH-------HHHHHHHH
T ss_pred HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH-------HHHHHHHH
Confidence 66667899999999999999998754 24678899999999999999999999999988764 67899999
Q ss_pred HhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 379 AADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 379 ~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
.+|.|++|.|+.+||+.+++.+|..+++++++.+++.+ |++|.|+|+||+.++.
T Consensus 111 ~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~ 164 (198)
T 1juo_A 111 SFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCV 164 (198)
T ss_dssp TTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHH
T ss_pred HhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHH
Confidence 99999999999999999999999999999999999999 8899999999999874
No 95
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.72 E-value=3e-17 Score=152.00 Aligned_cols=165 Identities=21% Similarity=0.186 Sum_probs=107.7
Q ss_pred CCCcccEEeccCCCcCc--ccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCc-hhhhcCCCCCEEE
Q psy2947 59 YFSHAFLLSLSYTPIGR--RIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIP-FTLTFCKNLTHLY 135 (441)
Q Consensus 59 ~l~~L~~l~l~~n~i~~--~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p-~~~~~l~~L~~L~ 135 (441)
.+++|+.|++++|.|.. ....+++|++|+|++|+++.+|..+..+++|+.|++++|+++ .+| ..+..+++|++|+
T Consensus 53 ~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~--~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 53 PYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT--SLPLGALRGLGELQELY 130 (290)
T ss_dssp TCTTCCEEECTTSCCCEEECCSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCC--CCCSSTTTTCTTCCEEE
T ss_pred cCCCCCEEECCCCccCcccCCCCCCcCCEEECCCCcCCcCchhhccCCCCCEEECCCCcCc--ccCHHHHcCCCCCCEEE
Confidence 35666667776664431 125566777777777777777776777777777777777776 444 4567777777777
Q ss_pred ccCCCCCccc-hhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhcccc
Q psy2947 136 LDNNLLDALP-GFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIA 213 (441)
Q Consensus 136 l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~ 213 (441)
|++|+|+.+| ..|..+++|+.|++++|++.... +..+..++.+..+ +++|.+..+|..+..+..|+.++
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~---------~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~ 201 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELP---------AGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAF 201 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCC---------TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEE
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCccC---------HHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEE
Confidence 7777777666 44566777777777777753221 1234555666666 77777778887777777888888
Q ss_pred cccccCCCCCCCchhhhHHHh
Q psy2947 214 SKENFFEPGLFPGPLVDYIAR 234 (441)
Q Consensus 214 l~~n~~~~~~~p~~~~~~l~~ 234 (441)
+++|++.+.+--..+..|+..
T Consensus 202 L~~Np~~C~c~~~~l~~wl~~ 222 (290)
T 1p9a_G 202 LHGNPWLCNCEILYFRRWLQD 222 (290)
T ss_dssp CCSCCBCCSGGGHHHHHHHHH
T ss_pred eCCCCccCcCccHHHHHHHHh
Confidence 888888765422234455543
No 96
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=99.72 E-value=4.2e-17 Score=143.75 Aligned_cols=129 Identities=16% Similarity=0.252 Sum_probs=54.6
Q ss_pred HHHHhhhcccc---CCCccCHHHHHHHHHHcCCCcCH-HHHHHHH----HhCCCcccHHHHHHHHHhhcCCCCCHHHHHH
Q psy2947 267 EFRECFFLFAR---NGTIKTLDELSVIMRSLGMSPTI-AELKKYL----AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVD 338 (441)
Q Consensus 267 ~l~~~f~~~d~---~G~i~~~~el~~~~~~~~~~~~~-~~~~~~~----~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 338 (441)
+++++|..+|. +|.| +.+|+..+++.++..+.. .++..++ .+++|.|+++||..++..... ....+.++.
T Consensus 20 ei~~~f~~fD~~~~~G~i-s~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~-~~~~~~l~~ 97 (211)
T 2ggz_A 20 ETHVWYRTFMMEYPSGLQ-TLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQ-EKMEQKLKW 97 (211)
T ss_dssp ----CCCSHHHHCTTSEE-EHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSC-SSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcC-CHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhcc-CchHHHHHH
Confidence 34445555542 3455 555555555554433221 1122222 234445555555544443321 123344444
Q ss_pred HHHhhcCCCCCcccHHHHHHHHHhhcc----CCCC-hHHHHHHHHHhCCCCCCcccHHHHHHHH
Q psy2947 339 AFKAADTTKSGKLSFPDFLKVMHTHSK----AEDI-PKEVVDAFKAADTTKSGTVPAKYLKHVL 397 (441)
Q Consensus 339 ~f~~~D~d~~g~i~~~ef~~~~~~~~~----~~~~-~~~~~~~f~~~D~~~~G~is~~ef~~~l 397 (441)
+|+.+|.|++|.|+++||..++..... .... .+.++.+|+.+|.|++|.|+++||++++
T Consensus 98 ~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~ 161 (211)
T 2ggz_A 98 YFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGM 161 (211)
T ss_dssp HHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred HHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHH
Confidence 555555555555555555544443321 1111 1234444555555555555555555444
No 97
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=99.72 E-value=1.1e-17 Score=135.85 Aligned_cols=123 Identities=15% Similarity=0.207 Sum_probs=102.9
Q ss_pred HHHhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhc--cCCCChHHHHHHHHHhCCC
Q psy2947 306 YLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHS--KAEDIPKEVVDAFKAADTT 383 (441)
Q Consensus 306 ~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~--~~~~~~~~~~~~f~~~D~~ 383 (441)
++.+++|.|+++||..++.... ...+.+.+..+|+.+|.+++|.|+++||..++.... ......+.++.+|+.+|.+
T Consensus 9 ~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f~~~D~d 87 (134)
T 1jfj_A 9 IDVNGDGAVSYEEVKAFVSKKR-AIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVD 87 (134)
T ss_dssp HCTTCSSEEEHHHHHHHHHTTC-CSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHHHHCCS
T ss_pred HCCCCCCcCCHHHHHHHHHHcC-CCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHHHHHCCC
Confidence 3367889999999999887653 345678899999999999999999999999885221 1112245689999999999
Q ss_pred CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q psy2947 384 KSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIA 433 (441)
Q Consensus 384 ~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l 433 (441)
++|.|+.+||+.++...|.++ +..+|+.+|.|++|.|+|+||++++
T Consensus 88 ~~G~i~~~e~~~~l~~~~~~~----~~~~~~~~D~~~dg~i~~~ef~~~l 133 (134)
T 1jfj_A 88 GDGKLTKEEVTSFFKKHGIEK----VAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp SSSEEEHHHHHHHHTTTTCHH----HHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred CCCccCHHHHHHHHHHhCHHH----HHHHHHHhCCCCCCcEeHHHHHHHh
Confidence 999999999999999877443 8899999999999999999999886
No 98
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.72 E-value=3.3e-18 Score=159.88 Aligned_cols=124 Identities=23% Similarity=0.217 Sum_probs=92.6
Q ss_pred CCCCCccC-CCCccCCCC---CCCC-CCcccEEeccCCC---cCcc-cCCCCCCCEEEccCCCCCcC---CcCccCCCCC
Q psy2947 39 CQRNCSLE-VGGICSHIW---IPQY-FSHAFLLSLSYTP---IGRR-IFKCDTVEVLSLKSNSLTSL---PPDIGRLTNL 106 (441)
Q Consensus 39 C~~~c~~~-~~~~c~~~~---~~~~-l~~L~~l~l~~n~---i~~~-~~~l~~L~~L~l~~n~l~~l---p~~~~~l~~L 106 (441)
||..|.|. .++.|...+ +|.. .++|+.|++++|. +|.. +..+++|++|+|++|.++.+ |..+..+++|
T Consensus 1 CP~~C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L 80 (306)
T 2z66_A 1 CPSRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSL 80 (306)
T ss_dssp CCTTCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCC
T ss_pred CcCCCeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCccccccccccc
Confidence 88888884 457787643 3332 3588999999884 4543 56788899999999888754 4556678888
Q ss_pred cEEEccCCcCCCCCCchhhhcCCCCCEEEccCCCCCccc--hhhcCCCCCCEEEccCCcC
Q psy2947 107 RVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLDALP--GFLLSMPQLDTVYRHGNHN 164 (441)
Q Consensus 107 ~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~lp--~~~~~l~~L~~L~l~~N~~ 164 (441)
++|++++|.+. .+|..+..+++|++|++++|+++.++ ..+..+++|++|++++|.+
T Consensus 81 ~~L~Ls~n~i~--~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l 138 (306)
T 2z66_A 81 KYLDLSFNGVI--TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT 138 (306)
T ss_dssp CEEECCSCSEE--EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCC
T ss_pred CEEECCCCccc--cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcC
Confidence 88888888887 67777777888888888888887765 3677778888888888774
No 99
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=99.72 E-value=1.8e-17 Score=140.20 Aligned_cols=125 Identities=20% Similarity=0.412 Sum_probs=97.0
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCc
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGT 387 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~ 387 (441)
.+++|.|+.+||..++... ....+...+..+|+.+|.+++|.|+++||..++..... ....+.++.+|+.+|.+++|.
T Consensus 38 ~~~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~ 115 (166)
T 2aao_A 38 ADKSGQITFEELKAGLKRV-GANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNK-IEREDHLFAAFTYFDKDGSGY 115 (166)
T ss_dssp TTCCSSBCHHHHHHHGGGG-TCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHH-HHTTHHHHHHHHHHCTTCSSS
T ss_pred CCCCCeEeHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhh-cccHHHHHHHHHHhCCCCCCc
Confidence 4677777777777777664 33456778899999999999999999999998864421 122467899999999999999
Q ss_pred ccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhcc
Q psy2947 388 VPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 388 is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~ 436 (441)
|+.+||+.++..+| +++++++.+++.+|.|++|.|+|+||+.++.+.
T Consensus 116 i~~~e~~~~l~~~~--~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 162 (166)
T 2aao_A 116 ITPDELQQACEEFG--VEDVRIEELMRDVDQDNDGRIDYNEFVAMMQKG 162 (166)
T ss_dssp BCHHHHHHHTCC----------CCHHHHHCTTCSSSBCHHHHHHHHC--
T ss_pred CcHHHHHHHHHHcC--CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhc
Confidence 99999999998876 678889999999999999999999999998653
No 100
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.71 E-value=7.2e-17 Score=132.60 Aligned_cols=133 Identities=21% Similarity=0.381 Sum_probs=118.1
Q ss_pred ccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCCCHHH
Q psy2947 262 KTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIPKE 335 (441)
Q Consensus 262 ~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~~~~~ 335 (441)
++++.+++++|..+|.+ |.| +..++..+++.++..++..++..++. +++|.|+++||..++..........+.
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i-~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~ 80 (142)
T 2bl0_C 2 DDQVSEFKEAFELFDSERTGFI-TKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDI 80 (142)
T ss_dssp CHHHHHHHHHHHHHCTTCSSEE-EHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcC-cHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHH
Confidence 56788999999999976 888 89999999999999999888888775 588999999999999876555667889
Q ss_pred HHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHH
Q psy2947 336 VVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVL 397 (441)
Q Consensus 336 ~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l 397 (441)
+..+|+.+|.|++|.|+.+||+.++... +.....+++..+|+.+| +++|.|+++||.++|
T Consensus 81 ~~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~ 140 (142)
T 2bl0_C 81 LRQAFRTFDPEGTGYIPKAALQDALLNL-GDRLKPHEFAEFLGITE-TEKGQIRYDNFINTM 140 (142)
T ss_dssp HHHHHHHTCCSSCSCEEHHHHHHHHHHS-SSCCCHHHHHHHHHHHC-CSSSEECSHHHHTTT
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHc-CCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHH
Confidence 9999999999999999999999999876 34556788999999999 999999999998876
No 101
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=99.71 E-value=5.3e-17 Score=137.65 Aligned_cols=140 Identities=27% Similarity=0.453 Sum_probs=121.5
Q ss_pred ceecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCC
Q psy2947 258 VFTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAED 331 (441)
Q Consensus 258 ~~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~ 331 (441)
..+++.+...+++.|..+|.+ |.| +..|+..+++.++..++..++..++. +++|.|+++||..++........
T Consensus 20 ~~l~~~~~~~l~~~F~~~D~d~~G~i-~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~ 98 (169)
T 3qrx_A 20 VGLTEEQKQEIREAFDLFDTDGSGTI-DAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERD 98 (169)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCCSEE-CHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCcC-cHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccC
Confidence 346678899999999999986 888 89999999999999999998888775 68899999999999886543333
Q ss_pred CHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 332 IPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 332 ~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
..+.+..+|+.+|.|++|.|+.+||..++... ......+++..+|+.+|.|++|.|+++||..+++.
T Consensus 99 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 165 (169)
T 3qrx_A 99 SREEILKAFRLFDDDNSGTITIKDLRRVAKEL-GENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 165 (169)
T ss_dssp HHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHT-TCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc-CCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 45789999999999999999999999999877 35566789999999999999999999999999865
No 102
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.71 E-value=6.2e-17 Score=148.40 Aligned_cols=122 Identities=30% Similarity=0.384 Sum_probs=86.8
Q ss_pred CccCC---CCccCCC---CCCCCC-CcccEEeccCCCc---C-cccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEE
Q psy2947 43 CSLEV---GGICSHI---WIPQYF-SHAFLLSLSYTPI---G-RRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLC 110 (441)
Q Consensus 43 c~~~~---~~~c~~~---~~~~~l-~~L~~l~l~~n~i---~-~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~ 110 (441)
|+|.. .+.|+.. .+|..+ ++|+.|++++|.+ + ..+..+++|++|+|++|.++.+|.. |..+++|++|+
T Consensus 12 C~c~~~~~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~ 91 (270)
T 2o6q_A 12 CSCNNNKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLW 91 (270)
T ss_dssp BEEETTTTEEECTTSCCSSCCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEE
T ss_pred CEeCCCCCEEEccCCCCCccCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEE
Confidence 66643 2556642 234322 4688888888843 3 3566788888888888888877776 57788888888
Q ss_pred ccCCcCCCCCCch-hhhcCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCcCcc
Q psy2947 111 LTDNCLQNASIPF-TLTFCKNLTHLYLDNNLLDALP-GFLLSMPQLDTVYRHGNHNYF 166 (441)
Q Consensus 111 l~~n~l~~~~~p~-~~~~l~~L~~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~~ 166 (441)
+++|.++ .+|. .+..+++|++|++++|+++.+| ..|..+++|++|++++|.+..
T Consensus 92 l~~n~l~--~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 147 (270)
T 2o6q_A 92 VTDNKLQ--ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS 147 (270)
T ss_dssp CCSSCCC--CCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCcCC--cCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCc
Confidence 8888887 4554 4577888888888888887776 456777888888888887543
No 103
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.70 E-value=1.7e-16 Score=141.76 Aligned_cols=145 Identities=24% Similarity=0.228 Sum_probs=110.5
Q ss_pred CccCCCCccCCCC---CCC-CCCcccEEeccCCCc----CcccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccC
Q psy2947 43 CSLEVGGICSHIW---IPQ-YFSHAFLLSLSYTPI----GRRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTD 113 (441)
Q Consensus 43 c~~~~~~~c~~~~---~~~-~l~~L~~l~l~~n~i----~~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~ 113 (441)
|++ .++.|+..+ +|. ..++|+.|+|++|.| |..+..+++|++|+|++|+|+.+|.. |..+++|+.|+|++
T Consensus 19 Cs~-~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 19 CSG-TTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp EET-TEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EeC-CEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 443 467787633 333 236888899988844 44567788899999999998888766 68888899999999
Q ss_pred CcCCCCCCch-hhhcCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHHHh
Q psy2947 114 NCLQNASIPF-TLTFCKNLTHLYLDNNLLDALPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEVLR 192 (441)
Q Consensus 114 n~l~~~~~p~-~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~l~ 192 (441)
|+++ .+|. .+..+++|++|+|++|+|+.+|..+..+++|+.|+|++|++.
T Consensus 98 N~l~--~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~--------------------------- 148 (229)
T 3e6j_A 98 NQLT--VLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLK--------------------------- 148 (229)
T ss_dssp SCCC--CCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCC---------------------------
T ss_pred CcCC--ccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCC---------------------------
Confidence 9887 5554 457888899999999998888888888888999999888842
Q ss_pred hcccccCC-chhhhhhhhcccccccccCCCC
Q psy2947 193 KQKKLHQP-SRLQDLAVQSVIASKENFFEPG 222 (441)
Q Consensus 193 ~~~~~~~p-~~l~~l~~l~~l~l~~n~~~~~ 222 (441)
.+| ..+..++.|+.+++++|++.+.
T Consensus 149 -----~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 149 -----SIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp -----CCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred -----ccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 222 2456678888999999998864
No 104
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=99.70 E-value=2.5e-16 Score=134.82 Aligned_cols=122 Identities=15% Similarity=0.179 Sum_probs=99.9
Q ss_pred CCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhc---CCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCC
Q psy2947 310 KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAAD---TTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSG 386 (441)
Q Consensus 310 ~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D---~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G 386 (441)
++|.|+.+||..++. ...+.+.+..+|+.+| .+++|.|+++||..++..+. .....+.++.+|+.||.|++|
T Consensus 39 ~dG~I~~~el~~~lg----~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~-~~~~~~~l~~~F~~~D~d~dG 113 (179)
T 3a8r_A 39 VDGVLLRSRFGKCIG----MDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLT-DQGFDNRLRTFFDMVDKNADG 113 (179)
T ss_dssp BTTBEEGGGHHHHHT----CCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHH-CCCHHHHHHHHHHHHCTTCSS
T ss_pred CCCCCcHHHHHHHHC----CCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHc-CCCHHHHHHHHHHHHCCCCCC
Confidence 678888888887552 2345566777887777 56789999999999887653 233467899999999999999
Q ss_pred cccHHHHHHHHH-HhCCC-C------CHHHHHHHHHHhCCCCCCceeHHHHHHHHhcc
Q psy2947 387 TVPAKYLKHVLV-NWGEG-L------SSKEVDQIFREANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 387 ~is~~ef~~~l~-~~~~~-l------~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~ 436 (441)
+|+.+||+.+++ .+|.. + ++++++.+|+.+|.|+||.|+|+||+.++.+.
T Consensus 114 ~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 171 (179)
T 3a8r_A 114 RLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQS 171 (179)
T ss_dssp CBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC--
T ss_pred cCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence 999999999998 78765 5 78899999999999999999999999998653
No 105
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.70 E-value=1.3e-16 Score=146.31 Aligned_cols=169 Identities=20% Similarity=0.209 Sum_probs=136.5
Q ss_pred CCCCCcccEEeccCCC---cCcc-cCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCchhhhcCCCC
Q psy2947 57 PQYFSHAFLLSLSYTP---IGRR-IFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPFTLTFCKNL 131 (441)
Q Consensus 57 ~~~l~~L~~l~l~~n~---i~~~-~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L 131 (441)
+..+++|+.|++++|. +|.. +..+++|++|+|++|+++.+|.. |..+++|++|++++|.++ +..|..+..+++|
T Consensus 57 ~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L 135 (270)
T 2o6q_A 57 FHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKL 135 (270)
T ss_dssp SSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTC
T ss_pred hcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccC-eeCHHHhCcCcCC
Confidence 3458999999999994 4444 46799999999999999988876 789999999999999998 4444557999999
Q ss_pred CEEEccCCCCCccc-hhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCch-hhhhhh
Q psy2947 132 THLYLDNNLLDALP-GFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSR-LQDLAV 208 (441)
Q Consensus 132 ~~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~-l~~l~~ 208 (441)
++|++++|.|+.+| ..+..+++|+.|++++|.+.... +..+..++.+..+ +++|.+..+|+. +..++.
T Consensus 136 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~---------~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 206 (270)
T 2o6q_A 136 TYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP---------EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEK 206 (270)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC---------TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred CEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC---------hhHhccCCCcCEEECCCCcCCcCCHHHhccccC
Confidence 99999999999998 45889999999999999964432 3346667777777 888888888764 788999
Q ss_pred hcccccccccCCCCCC-CchhhhHHHhh
Q psy2947 209 QSVIASKENFFEPGLF-PGPLVDYIARE 235 (441)
Q Consensus 209 l~~l~l~~n~~~~~~~-p~~~~~~l~~~ 235 (441)
|+.+++++|++.+..- ...+.+|+...
T Consensus 207 L~~L~l~~N~~~c~c~~~~~~~~~l~~~ 234 (270)
T 2o6q_A 207 LKMLQLQENPWDCTCNGIIYMAKWLKKK 234 (270)
T ss_dssp CCEEECCSSCBCCSSSSSHHHHHHHHHH
T ss_pred CCEEEecCCCeeCCCccHHHHHHHHHhh
Confidence 9999999999987542 23455666544
No 106
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=99.70 E-value=7.1e-17 Score=133.35 Aligned_cols=138 Identities=28% Similarity=0.477 Sum_probs=119.8
Q ss_pred ceecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCC
Q psy2947 258 VFTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAED 331 (441)
Q Consensus 258 ~~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~ 331 (441)
..+++.++..+++.|..+|.+ |.| +..++..+++.++..++..++..++. +++|.|+++||..++........
T Consensus 3 ~~l~~~~~~~l~~~F~~~D~~~~G~i-~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 81 (147)
T 4ds7_A 3 QNLTEEQIAEFKEAFALFDKDNSGSI-SASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCND 81 (147)
T ss_dssp -CCCHHHHHHHHHHHHHHCTTCSSEE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCCc-CHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCC
Confidence 346788899999999999976 788 89999999999999999988887775 67899999999999976544444
Q ss_pred CHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 332 IPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 332 ~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
..+.+..+|+.+|.|++|.|+.+||..++... +.....+++..+|+.+| +++|.|+++||.++++
T Consensus 82 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 82 SEQELLEAFKVFDKNGDGLISAAELKHVLTSI-GEKLTDAEVDEMLREVS-DGSGEINIKQFAALLS 146 (147)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-TCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred cHHHHHHHHHHhCCCCCCeECHHHHHHHHHHc-CCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence 56789999999999999999999999999876 45566789999999999 9999999999999874
No 107
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=99.70 E-value=9.4e-17 Score=141.17 Aligned_cols=124 Identities=20% Similarity=0.294 Sum_probs=99.0
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCC---------------CChHH
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAE---------------DIPKE 372 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~---------------~~~~~ 372 (441)
.+++|.|+.+||..++. ... ... ...+|+.+|.+++|.|+++||..++....... ...+.
T Consensus 40 ~d~dG~Is~~El~~~~~-lg~-~~~---~~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (208)
T 2ct9_A 40 KGENGTLSREDFQRIPE-LAI-NPL---GDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNK 114 (208)
T ss_dssp TTCSSEECTGGGGGCHH-HHT-STT---HHHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC-----------CCTTSHHHH
T ss_pred CCCCCcCcHHHHHHHHH-cCC-CCc---HHHHHHHHcCCCCCcCcHHHHHHHHHhhccccchhhhcccccccccccHHHH
Confidence 45677777777766432 111 111 24678889999999999999999887653211 14578
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHHh-CCCCCHHHHHHH----HHHhCCCCCCceeHHHHHHHHhcc
Q psy2947 373 VVDAFKAADTTKSGTVPAKYLKHVLVNW-GEGLSSKEVDQI----FREANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 373 ~~~~f~~~D~~~~G~is~~ef~~~l~~~-~~~l~~~~~~~l----~~~~d~d~dg~i~~~ef~~~l~~~ 436 (441)
++.+|+.+|.|++|+|+.+||+.++..+ |..+++++++.+ ++.+|.|+||.|+|+||+.++.+.
T Consensus 115 l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~~~ 183 (208)
T 2ct9_A 115 LHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKV 183 (208)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTTTS
T ss_pred HHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcc
Confidence 8999999999999999999999999997 999999999888 999999999999999999988653
No 108
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.70 E-value=5.1e-17 Score=159.78 Aligned_cols=173 Identities=23% Similarity=0.303 Sum_probs=126.7
Q ss_pred CCcCCCCCccCC---CCccCCCC---CCCC-CCcccEEeccCCCcC----cccCCCCCCCEEEccCCCCCcCCcC-ccCC
Q psy2947 36 QTACQRNCSLEV---GGICSHIW---IPQY-FSHAFLLSLSYTPIG----RRIFKCDTVEVLSLKSNSLTSLPPD-IGRL 103 (441)
Q Consensus 36 ~~~C~~~c~~~~---~~~c~~~~---~~~~-l~~L~~l~l~~n~i~----~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l 103 (441)
..+||..|.|.. .+.|...+ +|.. .++++.|+|++|.|. ..+..+++|++|+|++|.++.++.. |..+
T Consensus 32 ~~~Cp~~C~C~~~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l 111 (440)
T 3zyj_A 32 AQTCPSVCSCSNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGL 111 (440)
T ss_dssp -CCCCSSSEECTTSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTC
T ss_pred cccCCCCCEeCCCCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCC
Confidence 346999999963 37788643 3433 367899999999553 5678899999999999999977754 8999
Q ss_pred CCCcEEEccCCcCCCCCCch-hhhcCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCcCccCccccccccccc-cc
Q psy2947 104 TNLRVLCLTDNCLQNASIPF-TLTFCKNLTHLYLDNNLLDALP-GFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIH-AR 180 (441)
Q Consensus 104 ~~L~~L~l~~n~l~~~~~p~-~~~~l~~L~~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p-~~ 180 (441)
++|++|+|++|+++ .+|. .+..+++|++|+|++|+|+.+| ..|..+++|+.|++++|... ..++ ..
T Consensus 112 ~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l---------~~i~~~~ 180 (440)
T 3zyj_A 112 ANLNTLELFDNRLT--TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRL---------SYISEGA 180 (440)
T ss_dssp SSCCEEECCSSCCS--SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTC---------CEECTTT
T ss_pred ccCCEEECCCCcCC--eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCc---------ceeCcch
Confidence 99999999999998 6665 5789999999999999998887 57788889999999885421 1122 23
Q ss_pred ccccchhHHH-HhhcccccCCchhhhhhhhcccccccccCC
Q psy2947 181 IRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIASKENFFE 220 (441)
Q Consensus 181 l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~l~~n~~~ 220 (441)
+..++.+..+ +.+|.+..+| .+..+++|+.|++++|.+.
T Consensus 181 ~~~l~~L~~L~L~~n~l~~~~-~~~~l~~L~~L~Ls~N~l~ 220 (440)
T 3zyj_A 181 FEGLSNLRYLNLAMCNLREIP-NLTPLIKLDELDLSGNHLS 220 (440)
T ss_dssp TTTCSSCCEEECTTSCCSSCC-CCTTCSSCCEEECTTSCCC
T ss_pred hhcccccCeecCCCCcCcccc-ccCCCcccCEEECCCCccC
Confidence 4555555555 5666666665 3566666666666666544
No 109
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=99.70 E-value=1.2e-16 Score=134.33 Aligned_cols=141 Identities=21% Similarity=0.377 Sum_probs=120.7
Q ss_pred cceecccchHHHHHhhhcccc---CCCccCHHHHHHHHHHcCCCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcC-
Q psy2947 257 KVFTFKTPYLEFRECFFLFAR---NGTIKTLDELSVIMRSLGMSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSK- 328 (441)
Q Consensus 257 ~~~l~~~~~~~l~~~f~~~d~---~G~i~~~~el~~~~~~~~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~- 328 (441)
...+++.++..++++|..+|. +|.| +.+++..+++.++..++..++..++. +++|.|+++||..++.....
T Consensus 9 ~~~l~~~~~~~l~~~F~~~D~~~~~G~i-~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~ 87 (161)
T 1dtl_A 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSI-STKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD 87 (161)
T ss_dssp GGGSCHHHHHHHHHHHHHHTTTCGGGSB-CHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-
T ss_pred HhhCCHHHHHHHHHHHHHHcCCCCCCcC-cHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcc
Confidence 345677889999999999996 4678 89999999999999899888888775 68999999999999987754
Q ss_pred --CCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 329 --AEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 329 --~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
.....+.+..+|+.+|.|++|.|+.+||+.++... ......+.+..+|+.+|.+++|.|+++||..++..
T Consensus 88 ~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~-g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 159 (161)
T 1dtl_A 88 DSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQAT-GETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159 (161)
T ss_dssp ----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC---CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred cccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 34556789999999999999999999999988766 34456788999999999999999999999999864
No 110
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=99.70 E-value=3.4e-17 Score=144.56 Aligned_cols=119 Identities=19% Similarity=0.311 Sum_probs=98.8
Q ss_pred CcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCc-ccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccH
Q psy2947 312 GKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGK-LSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPA 390 (441)
Q Consensus 312 g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~-i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~ 390 (441)
|.|+.+||.. +...... .. ...+|+.+|.|++|. |+++||..++..........+.++.+|+.||.|++|+|+.
T Consensus 74 G~I~~~E~~~-l~~lg~~-~~---~~~lf~~~D~d~dG~~I~f~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~ 148 (214)
T 2l4h_A 74 AQVPFEQILS-LPELKAN-PF---KERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNR 148 (214)
T ss_dssp SEECHHHHTT-CHHHHTS-TT---HHHHHHHHCCSSSCCSEEHHHHHHHHHHTSSCSCHHHHHHHHHHHHCTTCSSCBCH
T ss_pred CcCCHHHHHH-hhccCCC-hH---HHHHHHHhCcCCCCCEecHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCcCCH
Confidence 8888888887 5443222 22 346889999999999 9999999999877544444678999999999999999999
Q ss_pred HHHHHHHHHhCC-----CCCHHHHHH----HHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 391 KYLKHVLVNWGE-----GLSSKEVDQ----IFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 391 ~ef~~~l~~~~~-----~l~~~~~~~----l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+||+.++..++. .+++++++. +|+.+|.|+||.|+|+||+.++.+
T Consensus 149 ~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 202 (214)
T 2l4h_A 149 EDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR 202 (214)
T ss_dssp HHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHHHHHT
T ss_pred HHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 999999998764 677777765 999999999999999999999865
No 111
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.69 E-value=5.8e-17 Score=159.96 Aligned_cols=172 Identities=23% Similarity=0.295 Sum_probs=123.4
Q ss_pred CCcCCCCCccCC---CCccCCCC---CCCCC-CcccEEeccCCCc----CcccCCCCCCCEEEccCCCCCcCC-cCccCC
Q psy2947 36 QTACQRNCSLEV---GGICSHIW---IPQYF-SHAFLLSLSYTPI----GRRIFKCDTVEVLSLKSNSLTSLP-PDIGRL 103 (441)
Q Consensus 36 ~~~C~~~c~~~~---~~~c~~~~---~~~~l-~~L~~l~l~~n~i----~~~~~~l~~L~~L~l~~n~l~~lp-~~~~~l 103 (441)
...||..|.|.. .+.|...+ +|..+ ++|+.|+|++|.| |..+..+++|++|+|++|.|+.++ ..|..+
T Consensus 43 ~~~Cp~~C~C~~~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l 122 (452)
T 3zyi_A 43 PQNCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGL 122 (452)
T ss_dssp -CCCCTTSEECSSSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred cCCCCCCCEECCCCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCc
Confidence 346999999953 47788744 34433 5899999999955 456788999999999999999766 459999
Q ss_pred CCCcEEEccCCcCCCCCCch-hhhcCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCcCccCccccccccccc-cc
Q psy2947 104 TNLRVLCLTDNCLQNASIPF-TLTFCKNLTHLYLDNNLLDALP-GFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIH-AR 180 (441)
Q Consensus 104 ~~L~~L~l~~n~l~~~~~p~-~~~~l~~L~~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p-~~ 180 (441)
++|++|+|++|.++ .+|. .+..+++|++|+|++|+|+.+| ..|..+++|+.|++++|... ..++ ..
T Consensus 123 ~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l---------~~i~~~~ 191 (452)
T 3zyi_A 123 ASLNTLELFDNWLT--VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKL---------EYISEGA 191 (452)
T ss_dssp TTCCEEECCSSCCS--BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTC---------CEECTTT
T ss_pred ccCCEEECCCCcCC--ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCc---------cccChhh
Confidence 99999999999998 5665 4788999999999999999887 57788888888888885421 1112 23
Q ss_pred ccccchhHHH-HhhcccccCCchhhhhhhhcccccccccC
Q psy2947 181 IRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIASKENFF 219 (441)
Q Consensus 181 l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~l~~n~~ 219 (441)
+..++.+..+ +.+|.+..+| .+..+++|+.|++++|.+
T Consensus 192 ~~~l~~L~~L~L~~n~l~~~~-~~~~l~~L~~L~Ls~N~l 230 (452)
T 3zyi_A 192 FEGLFNLKYLNLGMCNIKDMP-NLTPLVGLEELEMSGNHF 230 (452)
T ss_dssp TTTCTTCCEEECTTSCCSSCC-CCTTCTTCCEEECTTSCC
T ss_pred ccCCCCCCEEECCCCcccccc-cccccccccEEECcCCcC
Confidence 4444444444 5555555554 355555555555555544
No 112
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.69 E-value=1.5e-16 Score=131.10 Aligned_cols=130 Identities=25% Similarity=0.448 Sum_probs=115.9
Q ss_pred HHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHH-hCCCcccHHHHHHHHHhhc-CCCCCHHHHHHHHHhh
Q psy2947 268 FRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLA-EKGGKLSFPDFLKVMHTHS-KAEDIPKEVVDAFKAA 343 (441)
Q Consensus 268 l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~-~~~g~i~~~ef~~~~~~~~-~~~~~~~~~~~~f~~~ 343 (441)
++++|..+|.+ |.| +.+++..+++.++..++..++..++. +++|.|+++||..++.... ........++.+|+.+
T Consensus 7 l~~~F~~~D~d~~G~i-~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~ 85 (145)
T 2bl0_B 7 IQECFQIFDKDNDGKV-SIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFKTVYRKPIKTPTEQSKEMLDAFRAL 85 (145)
T ss_dssp HHHHHHHHCTTCSSCE-EGGGHHHHHHHTTCCCCHHHHHHHHHHHTSSEECHHHHHHHHTSCCCCGGGGHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCcCcc-CHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCeEcHHHHHHHHHHHhhcCcccHHHHHHHHHHh
Confidence 88999999976 888 89999999999999999999998887 7999999999999998654 3344568899999999
Q ss_pred cCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 344 DTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 344 D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
|.|++|.|+.+||..++... +.....+++..+|+.+|.+++|.|+++||..++..
T Consensus 86 D~d~~G~i~~~e~~~~l~~~-g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 140 (145)
T 2bl0_B 86 DKEGNGTIQEAELRQLLLNL-GDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT 140 (145)
T ss_dssp CSSSSSEEEHHHHHHHHHHS-SSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred CCCCCCeEcHHHHHHHHHHc-CCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence 99999999999999999877 34456789999999999999999999999999986
No 113
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=99.69 E-value=2.7e-17 Score=146.55 Aligned_cols=127 Identities=20% Similarity=0.246 Sum_probs=96.3
Q ss_pred HHHhCCCcccHHHHHHHHHhhcCCCCCHHH----HHHHHHhh-----cCCCCCcccHHHHHHHHHhhccCCCChHHHHHH
Q psy2947 306 YLAEKGGKLSFPDFLKVMHTHSKAEDIPKE----VVDAFKAA-----DTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDA 376 (441)
Q Consensus 306 ~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~----~~~~f~~~-----D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~ 376 (441)
++.+++|.|+++||..++........+... +..+|..+ |.|++|.|+++||..++..... ....+.++.+
T Consensus 60 ~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~-~~~~~~l~~~ 138 (226)
T 2lvv_A 60 FDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEFRLMLCY-IYDIFELTVM 138 (226)
T ss_dssp HGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHHHHHHHH-HHHHHHHHHH
T ss_pred HCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHHHHHHHh-ccCHHHHHHH
Confidence 336788888888888855544333333333 44444444 9999999999999995432211 1113578999
Q ss_pred HHHhCCCCCCcccHHHHHHHHHHh---CCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 377 FKAADTTKSGTVPAKYLKHVLVNW---GEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 377 f~~~D~~~~G~is~~ef~~~l~~~---~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
|+.+|.|++|+|+.+||+.++..+ |...+ +++.+|+.+|.|+||.|+|+||+.+|.+
T Consensus 139 F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~--e~~~~~~~~D~d~dG~Is~~EF~~~~~~ 198 (226)
T 2lvv_A 139 FDTMDKDGSLLLELQEFKEALPKLKEWGVDIT--DATTVFNEIDTNGSGVVTFDEFSCWAVT 198 (226)
T ss_dssp HHHHSCSSCCEECHHHHHHHHHHHHHHTCCCC--SCHHHHHHHCCSCSSCEEHHHHHHHHHH
T ss_pred HHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHH--HHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 999999999999999999999987 65554 5899999999999999999999999854
No 114
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=99.69 E-value=1e-17 Score=144.49 Aligned_cols=150 Identities=11% Similarity=0.128 Sum_probs=110.9
Q ss_pred eecccchHHHHHhhhccccC--CCccCHHHHHHHHHHc------CCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCC
Q psy2947 259 FTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSL------GMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAE 330 (441)
Q Consensus 259 ~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~------~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~ 330 (441)
.+++.++.+++++|..+|.+ |.| +.+|+..+++.+ +..++..++..+.. .
T Consensus 7 ~l~~~~~~~l~~~F~~~D~d~dG~i-~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~----------------~----- 64 (186)
T 2hps_A 7 SERAYHLRKMKTRMQRVDVTGDGFI-SREDYELIAVRIAKIAKLSAEKAEETRQEFLR----------------V----- 64 (186)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCSSEE-EHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH----------------H-----
T ss_pred cccHHHHHHHHHHhhhcCCCCCCcc-CHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHH----------------H-----
Confidence 45667788888888888875 778 788888888765 43333333322221 0
Q ss_pred CCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHH--HHhCCCCCCcccHHHHHHHHHHhCCCCCHHH
Q psy2947 331 DIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAF--KAADTTKSGTVPAKYLKHVLVNWGEGLSSKE 408 (441)
Q Consensus 331 ~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f--~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~ 408 (441)
...+ .+|+.+|.|++|.|+++| .++..........+.+...| +.||.|++|.|+.+||++++..+|..+++++
T Consensus 65 --~~~~-~~f~~~D~d~dg~I~~~E--~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~ 139 (186)
T 2hps_A 65 --ADQL-GLAPGVRISVEEAAVNAT--DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDK 139 (186)
T ss_dssp --HHHH-TCCTTCEEEHHHHHHHHH--HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHH
T ss_pred --HHHH-HHHHhcCCCCCCcccHHH--HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHH
Confidence 0123 457889999999999999 55544321111112344445 7789999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 409 VDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 409 ~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
++.+|+.+|.|++|.|+|+||+.++..
T Consensus 140 ~~~~~~~~D~d~dG~i~~~ef~~~~~~ 166 (186)
T 2hps_A 140 AITCFNTLDFNKNGQISRDEFLVTVND 166 (186)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 999999999999999999999998864
No 115
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.69 E-value=5.6e-17 Score=170.48 Aligned_cols=106 Identities=28% Similarity=0.275 Sum_probs=83.3
Q ss_pred CCCcccEEeccCC----CcCcccCCCCCCCEEEccCCCCC-cCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCE
Q psy2947 59 YFSHAFLLSLSYT----PIGRRIFKCDTVEVLSLKSNSLT-SLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTH 133 (441)
Q Consensus 59 ~l~~L~~l~l~~n----~i~~~~~~l~~L~~L~l~~n~l~-~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~ 133 (441)
.+++|+.|++++| .+|..+..+++|++|++++|+++ .+|..+..+++|+.|++++|+++ +.+|..++.+++|++
T Consensus 440 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~ 518 (768)
T 3rgz_A 440 SLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLT-GEIPKWIGRLENLAI 518 (768)
T ss_dssp GCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCC-SCCCGGGGGCTTCCE
T ss_pred cCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccC-CcCChHHhcCCCCCE
Confidence 3567777777777 34566677788888888888887 67777888888888888888887 778888888888888
Q ss_pred EEccCCCCC-ccchhhcCCCCCCEEEccCCcCc
Q psy2947 134 LYLDNNLLD-ALPGFLLSMPQLDTVYRHGNHNY 165 (441)
Q Consensus 134 L~l~~n~l~-~lp~~~~~l~~L~~L~l~~N~~~ 165 (441)
|++++|++. .+|..++.+++|+.|++++|++.
T Consensus 519 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 551 (768)
T 3rgz_A 519 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFN 551 (768)
T ss_dssp EECCSSCCEEECCGGGGGCTTCCEEECCSSEEE
T ss_pred EECCCCcccCcCCHHHcCCCCCCEEECCCCccC
Confidence 888888884 67888888888888888888764
No 116
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=99.68 E-value=1.3e-16 Score=134.07 Aligned_cols=141 Identities=22% Similarity=0.428 Sum_probs=120.7
Q ss_pred ceecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCC
Q psy2947 258 VFTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAED 331 (441)
Q Consensus 258 ~~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~ 331 (441)
..+++.++..++++|..+|.+ |.| +..++..+++.++..++..++..++. +++|.|+++||..++........
T Consensus 12 ~~ls~~~~~~l~~~F~~~D~d~~G~i-~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 90 (162)
T 1top_A 12 AFLSEEMIAEFKAAFDMFDADGGGDI-STKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDA 90 (162)
T ss_dssp HHSCHHHHHHHHHHHHTTTCSCSSEE-EGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHHHHCCCCCCcC-CHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhcccc
Confidence 356788899999999999975 888 89999999999999889888887775 57899999999999875532212
Q ss_pred ---CHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 332 ---IPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 332 ---~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
....+..+|+.+|.|++|.|+.+||+.++... +.....+++..+|+.+|.+++|.|+++||..++..+
T Consensus 91 ~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~-g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 161 (162)
T 1top_A 91 KGKSEEELANCFRIFDKNADGFIDIEELGEILRAT-GEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161 (162)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTT-TCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred ccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhc
Confidence 45678999999999999999999999999876 344567889999999999999999999999998754
No 117
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.68 E-value=1e-16 Score=160.26 Aligned_cols=128 Identities=19% Similarity=0.325 Sum_probs=109.7
Q ss_pred HhCCCcccHHHHHHHHHhhc-------CCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHh
Q psy2947 308 AEKGGKLSFPDFLKVMHTHS-------KAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAA 380 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~-------~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~ 380 (441)
.+++|.|+.+||..++.... ......+++..+|+.+|.|++|.|+++||..++... ......+.++.+|+.+
T Consensus 366 ~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~-~~~~~~~~~~~~F~~~ 444 (504)
T 3q5i_A 366 KNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDK-QILFSEERLRRAFNLF 444 (504)
T ss_dssp TTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCH-HHHTCHHHHHHHHHHH
T ss_pred CCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhh-hcccCHHHHHHHHHHh
Confidence 57899999999999887653 224557899999999999999999999999988654 2223367899999999
Q ss_pred CCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhccCC
Q psy2947 381 DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAPVP 438 (441)
Q Consensus 381 D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~~~ 438 (441)
|.|++|+|+.+||+.++... .+++++++++|+.+|.|+||.|+|+||+++|.+...
T Consensus 445 D~d~dG~Is~~El~~~l~~~--~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~ 500 (504)
T 3q5i_A 445 DTDKSGKITKEELANLFGLT--SISEKTWNDVLGEADQNKDNMIDFDEFVSMMHKICD 500 (504)
T ss_dssp CTTCCSEECHHHHHHHTTCS--CCCHHHHHHHHHTTCSSCSSSEEHHHHHHHHHHHC-
T ss_pred cCCCCCcCcHHHHHHHHhhC--CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhcc
Confidence 99999999999999998763 489999999999999999999999999999976543
No 118
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.68 E-value=2.1e-16 Score=157.34 Aligned_cols=127 Identities=17% Similarity=0.306 Sum_probs=107.6
Q ss_pred HhCCCcccHHHHHHHHHhhcCC---CCC-------HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHH
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKA---EDI-------PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAF 377 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~---~~~-------~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f 377 (441)
.+++|.|+.+||..++...... ..+ .+++..+|+.+|.|++|.|+++||..++... ......+.++.+|
T Consensus 346 ~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~-~~~~~~~~~~~~F 424 (484)
T 3nyv_A 346 KNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDR-KTLLSRERLERAF 424 (484)
T ss_dssp TTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred cCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhc-cccCcHHHHHHHH
Confidence 5789999999997777655332 222 6789999999999999999999999987765 2222356889999
Q ss_pred HHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhccC
Q psy2947 378 KAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAPV 437 (441)
Q Consensus 378 ~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~~ 437 (441)
+.+|.|+||+|+.+||+.++.. ..+++++++.+|+.+|.|+||.|+|+||+++|.+-.
T Consensus 425 ~~~D~d~dG~I~~~El~~~l~~--~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~~ 482 (484)
T 3nyv_A 425 RMFDSDNSGKISSTELATIFGV--SDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKLC 482 (484)
T ss_dssp HHHCTTCCSEEEHHHHHHHHHH--TTCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTT
T ss_pred HHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHhhh
Confidence 9999999999999999999987 458999999999999999999999999999997643
No 119
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.68 E-value=3.1e-17 Score=163.39 Aligned_cols=130 Identities=17% Similarity=0.302 Sum_probs=92.1
Q ss_pred HhCCCcccHHHHHHHHHhhcC---C----------CCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHH
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSK---A----------EDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVV 374 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~---~----------~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~ 374 (441)
.+++|.|+.+||..++..... . ....+.+..+|+.+|.|++|.|+++||..++.... .....+.++
T Consensus 342 ~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~-~~~~~~~~~ 420 (486)
T 3mwu_A 342 TNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRT-ILLSRERME 420 (486)
T ss_dssp TTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSCTT-TTCCHHHHH
T ss_pred CCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHhhh-ccchHHHHH
Confidence 578999999999776664421 1 12367899999999999999999999998876542 333467899
Q ss_pred HHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhccCC
Q psy2947 375 DAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAPVP 438 (441)
Q Consensus 375 ~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~~~ 438 (441)
.+|+.+|.|+||.|+.+||+.++...|..+++++++.+|+.+|.|+||.|+|+||+++|.+-+.
T Consensus 421 ~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~ 484 (486)
T 3mwu_A 421 RAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNFVR 484 (486)
T ss_dssp HHHHHHCSSCSSSBCSSCC--------------------CCCCSSCSSSBCHHHHHHHHHHHCC
T ss_pred HHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999999999999976543
No 120
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.68 E-value=6.2e-17 Score=161.52 Aligned_cols=128 Identities=20% Similarity=0.301 Sum_probs=109.2
Q ss_pred HhCCCcccHHHHHHHHHhhcCC-------CCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHh
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKA-------EDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAA 380 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~-------~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~ 380 (441)
.+++|.|+++||..++...... ....+++..+|+.+|.|++|.|+++||..++... ......+.++.+|+.+
T Consensus 357 ~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~-~~~~~~~~~~~~F~~~ 435 (494)
T 3lij_A 357 KNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDR-KSLLSKDKLESAFQKF 435 (494)
T ss_dssp TTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCH-HHHTCHHHHHHHHHHH
T ss_pred cCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhh-hccccHHHHHHHHHHH
Confidence 4789999999999998877432 2336889999999999999999999999987654 2223467899999999
Q ss_pred CCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhccCC
Q psy2947 381 DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAPVP 438 (441)
Q Consensus 381 D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~~~ 438 (441)
|+|++|+|+.+||++++.. ..+++++++++|+.+|.|+||.|+|+||+++|.+-.+
T Consensus 436 D~d~~G~Is~~El~~~l~~--~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~ 491 (494)
T 3lij_A 436 DQDGNGKISVDELASVFGL--DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLCS 491 (494)
T ss_dssp CTTCSSEECHHHHHHHC-C--CSCCCHHHHHHHHTTCSSSSSSEEHHHHHHHHHHHSS
T ss_pred CCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhhcc
Confidence 9999999999999999975 5688999999999999999999999999999976433
No 121
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.67 E-value=1.2e-16 Score=158.80 Aligned_cols=172 Identities=23% Similarity=0.301 Sum_probs=132.6
Q ss_pred cCCCCCccCC---CCccCCCC---CCCC-CCcccEEeccCCCc----CcccCCCCCCCEEEccCCCCCcC-CcCccCCCC
Q psy2947 38 ACQRNCSLEV---GGICSHIW---IPQY-FSHAFLLSLSYTPI----GRRIFKCDTVEVLSLKSNSLTSL-PPDIGRLTN 105 (441)
Q Consensus 38 ~C~~~c~~~~---~~~c~~~~---~~~~-l~~L~~l~l~~n~i----~~~~~~l~~L~~L~l~~n~l~~l-p~~~~~l~~ 105 (441)
+||..|.|.. .+.|...+ +|.. .++|+.|+|++|.| |..+..+++|++|+|++|.++.+ |..|..+++
T Consensus 2 ~Cp~~C~C~~~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 81 (477)
T 2id5_A 2 GCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN 81 (477)
T ss_dssp CCSTTCEEETTTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred cccCCCeECCCCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCcc
Confidence 6999999954 47788643 4443 35899999999955 35678899999999999999966 666999999
Q ss_pred CcEEEccCCcCCCCCCchh-hhcCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCcCccCcccccccccccccccc
Q psy2947 106 LRVLCLTDNCLQNASIPFT-LTFCKNLTHLYLDNNLLDAL-PGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRS 183 (441)
Q Consensus 106 L~~L~l~~n~l~~~~~p~~-~~~l~~L~~L~l~~n~l~~l-p~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~ 183 (441)
|++|++++|.++ .+|.. +.++++|++|+|++|.+..+ |..|..+++|+.|++++|.+... .+..+..
T Consensus 82 L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~---------~~~~~~~ 150 (477)
T 2id5_A 82 LRTLGLRSNRLK--LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYI---------SHRAFSG 150 (477)
T ss_dssp CCEEECCSSCCC--SCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEE---------CTTSSTT
T ss_pred CCEEECCCCcCC--ccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCcccee---------ChhhccC
Confidence 999999999998 67764 68999999999999999876 47888999999999999986332 2445555
Q ss_pred cchhHHH-HhhcccccCCc-hhhhhhhhcccccccccCC
Q psy2947 184 TSTRDEV-LRKQKKLHQPS-RLQDLAVQSVIASKENFFE 220 (441)
Q Consensus 184 l~~~~~~-l~~~~~~~~p~-~l~~l~~l~~l~l~~n~~~ 220 (441)
++.+..+ +.+|.+..+|. .+..+++|+.|+++.|.+.
T Consensus 151 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~ 189 (477)
T 2id5_A 151 LNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNIN 189 (477)
T ss_dssp CTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCC
T ss_pred CCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCc
Confidence 6666555 66666666663 3566677777777666543
No 122
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.67 E-value=2.3e-16 Score=145.77 Aligned_cols=165 Identities=22% Similarity=0.241 Sum_probs=88.6
Q ss_pred CCcccEEeccCCC-c----CcccCCCCCCCEEEccCCCCCcCC-cCccCCCCCcEEEccCCcCCCCCCch-hhhcCCCCC
Q psy2947 60 FSHAFLLSLSYTP-I----GRRIFKCDTVEVLSLKSNSLTSLP-PDIGRLTNLRVLCLTDNCLQNASIPF-TLTFCKNLT 132 (441)
Q Consensus 60 l~~L~~l~l~~n~-i----~~~~~~l~~L~~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~n~l~~~~~p~-~~~~l~~L~ 132 (441)
+++|+.|++++|. + |..+..+++|++|++++|.++.++ ..+..+++|++|++++|.++ .+|. .+..+++|+
T Consensus 79 l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--~~~~~~~~~l~~L~ 156 (285)
T 1ozn_A 79 LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ--ALPDDTFRDLGNLT 156 (285)
T ss_dssp CTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC--CCCTTTTTTCTTCC
T ss_pred ccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccc--ccCHhHhccCCCcc
Confidence 4445555555442 2 223444455555555555555332 22444555555555555554 2332 244455555
Q ss_pred EEEccCCCCCccch-hhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCc-hhhhhhhh
Q psy2947 133 HLYLDNNLLDALPG-FLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPS-RLQDLAVQ 209 (441)
Q Consensus 133 ~L~l~~n~l~~lp~-~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~-~l~~l~~l 209 (441)
+|++++|+++.+|. .+..+++|+.|++++|.+ ....|..+..++.+..+ +.+|.+..+|+ .+..++.|
T Consensus 157 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l---------~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 227 (285)
T 1ozn_A 157 HLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV---------AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRAL 227 (285)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCC---------CEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTC
T ss_pred EEECCCCcccccCHHHhcCccccCEEECCCCcc---------cccCHhHccCcccccEeeCCCCcCCcCCHHHcccCccc
Confidence 55555555554442 344455555555555543 22335566666666666 77777777764 47778888
Q ss_pred cccccccccCCCCCCCchhhhHHHhh
Q psy2947 210 SVIASKENFFEPGLFPGPLVDYIARE 235 (441)
Q Consensus 210 ~~l~l~~n~~~~~~~p~~~~~~l~~~ 235 (441)
+.+++++|++.+..-...+.+|+...
T Consensus 228 ~~L~l~~N~~~c~~~~~~~~~~l~~~ 253 (285)
T 1ozn_A 228 QYLRLNDNPWVCDCRARPLWAWLQKF 253 (285)
T ss_dssp CEEECCSSCEECSGGGHHHHHHHHHC
T ss_pred CEEeccCCCccCCCCcHHHHHHHHhc
Confidence 88888888877654334455555443
No 123
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=99.67 E-value=5.1e-16 Score=160.33 Aligned_cols=158 Identities=15% Similarity=0.164 Sum_probs=136.6
Q ss_pred ecccc-hHHHHHhhhcccc-CCCccCHHHHHHHHHHc--------CCCcCHHHHHHHHH----hCCCcccHHHHHHHHHh
Q psy2947 260 TFKTP-YLEFRECFFLFAR-NGTIKTLDELSVIMRSL--------GMSPTIAELKKYLA----EKGGKLSFPDFLKVMHT 325 (441)
Q Consensus 260 l~~~~-~~~l~~~f~~~d~-~G~i~~~~el~~~~~~~--------~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~ 325 (441)
+++++ ..++++.|..+|. +|.| +.+|++.+++.+ +..++..++..++. +++|.|+++||..++..
T Consensus 525 ls~~e~~~~l~~~F~~~Dd~dG~I-s~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~ 603 (714)
T 3bow_A 525 ANEEDIGDGFRRLFAQLAGEDAEI-SAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTK 603 (714)
T ss_dssp CSGGGCCHHHHHHHHHHHGGGTSB-CHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHH
T ss_pred CChhhHHHHHHHHHHHHcCCCCcC-CHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 55666 8899999999982 3889 899999999997 66788888887765 68899999999999986
Q ss_pred hcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCC
Q psy2947 326 HSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLS 405 (441)
Q Consensus 326 ~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~ 405 (441)
. +.++.+|+.+|.|++|.|+.+||+.++.... .....+.++.+|+.+| |++|.|+++||..++...
T Consensus 604 ~-------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G-~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~~----- 669 (714)
T 3bow_A 604 I-------QKYQKIYREIDVDRSGTMNSYEMRKALEEAG-FKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRL----- 669 (714)
T ss_dssp H-------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTT-EECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHHH-----
T ss_pred H-------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcC-CCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHH-----
Confidence 4 7899999999999999999999999998763 3455788999999999 999999999999999764
Q ss_pred HHHHHHHHHHhCCCCCCceeHHHHHHHH
Q psy2947 406 SKEVDQIFREANVTMNSKVRYEDFVKIA 433 (441)
Q Consensus 406 ~~~~~~l~~~~d~d~dg~i~~~ef~~~l 433 (441)
+.+..+|+.+|.|++|.|+.+|+..++
T Consensus 670 -~~l~~~F~~~D~d~dG~Is~~el~~l~ 696 (714)
T 3bow_A 670 -EILFKIFKQLDPENTGTIQLDLISWLS 696 (714)
T ss_dssp -HHHHHHHSSSCSSCCSEEEEEHHHHHH
T ss_pred -HHHHHHHHHhCCCCCCcEEHHHHHHHH
Confidence 678899999999999999998876544
No 124
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=99.67 E-value=4.5e-16 Score=129.78 Aligned_cols=138 Identities=15% Similarity=0.268 Sum_probs=113.7
Q ss_pred ccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHH-HHHHHhCCCcccHHHHHHHHHhhcCCCCCHHHHHH
Q psy2947 262 KTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAEL-KKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVVD 338 (441)
Q Consensus 262 ~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 338 (441)
++++.++++.|..+|.+ |.| +.+|+ ..+..++..+....+ ..+..+++|.|+++||..++..........+.++.
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i-~~~el-~~l~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 79 (155)
T 3ll8_B 2 ADEIKRLGKRFKKLDLDNSGSL-SVEEF-MSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRF 79 (155)
T ss_dssp CHHHHHHHHHHHHHCTTCSSSB-CHHHH-TTSGGGTTCTTHHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCCeE-cHHHH-HHhhccccchHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHH
Confidence 56789999999999875 889 89999 566666665544433 33445789999999999999987666667789999
Q ss_pred HHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHH----hCCCCCCcccHHHHHHHHHHhC
Q psy2947 339 AFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKA----ADTTKSGTVPAKYLKHVLVNWG 401 (441)
Q Consensus 339 ~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~----~D~~~~G~is~~ef~~~l~~~~ 401 (441)
+|+.+|.|++|.|+.+||..++..........+.+..+|+. +|.+++|.|+++||..++...+
T Consensus 80 ~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 146 (155)
T 3ll8_B 80 AFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLD 146 (155)
T ss_dssp HHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGGC
T ss_pred HHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccC
Confidence 99999999999999999999998743445556777777777 9999999999999999998865
No 125
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=6.4e-16 Score=132.17 Aligned_cols=128 Identities=29% Similarity=0.396 Sum_probs=105.1
Q ss_pred CCCCCccC-CCCccCCCC---CCC-CCCcccEEeccCCCc---Cc-ccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcE
Q psy2947 39 CQRNCSLE-VGGICSHIW---IPQ-YFSHAFLLSLSYTPI---GR-RIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRV 108 (441)
Q Consensus 39 C~~~c~~~-~~~~c~~~~---~~~-~l~~L~~l~l~~n~i---~~-~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~ 108 (441)
||..|+|. .++.|...+ +|. ..++|+.|++++|.+ |. .+..+++|++|++++|+++.+|.. |..+++|+.
T Consensus 1 Cp~~C~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 80 (177)
T 2o6r_A 1 CPSRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTI 80 (177)
T ss_dssp CCTTCEEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CcCCCEeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCE
Confidence 88899984 456777633 232 347899999999954 43 457889999999999999988876 789999999
Q ss_pred EEccCCcCCCCCCch-hhhcCCCCCEEEccCCCCCccch-hhcCCCCCCEEEccCCcCccCc
Q psy2947 109 LCLTDNCLQNASIPF-TLTFCKNLTHLYLDNNLLDALPG-FLLSMPQLDTVYRHGNHNYFKS 168 (441)
Q Consensus 109 L~l~~n~l~~~~~p~-~~~~l~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~l~~N~~~~~~ 168 (441)
|++++|.++ .+|. .+..+++|++|++++|+|+.+|. .+..+++|+.|++++|++.+.+
T Consensus 81 L~l~~N~l~--~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 81 LYLHENKLQ--SLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp EECCSSCCC--CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred EECCCCCcc--ccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 999999998 5555 46899999999999999999985 4678999999999999976654
No 126
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.67 E-value=3.2e-16 Score=133.07 Aligned_cols=112 Identities=29% Similarity=0.367 Sum_probs=94.4
Q ss_pred cCCCCCccCCCCccCCCCCCCCCCcccEEeccCC---CcCcccCCCCCCCEEEccCCCCCcCCc-CccCCCCCcEEEccC
Q psy2947 38 ACQRNCSLEVGGICSHIWIPQYFSHAFLLSLSYT---PIGRRIFKCDTVEVLSLKSNSLTSLPP-DIGRLTNLRVLCLTD 113 (441)
Q Consensus 38 ~C~~~c~~~~~~~c~~~~~~~~l~~L~~l~l~~n---~i~~~~~~l~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~l~~ 113 (441)
+||..|.|. .+.+++++| .+|..+. ++|++|+|++|+|+.+++ .|..+++|++|+|++
T Consensus 2 ~CP~~C~C~----------------~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~ 63 (170)
T 3g39_A 2 ACPSQCSCS----------------GTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDN 63 (170)
T ss_dssp CCC-CCEEE----------------TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCS
T ss_pred cCcCcCCcC----------------CCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCC
Confidence 699999994 245677777 4565553 889999999999998854 599999999999999
Q ss_pred CcCCCCCCchh-hhcCCCCCEEEccCCCCCccch-hhcCCCCCCEEEccCCcCccCcc
Q psy2947 114 NCLQNASIPFT-LTFCKNLTHLYLDNNLLDALPG-FLLSMPQLDTVYRHGNHNYFKST 169 (441)
Q Consensus 114 n~l~~~~~p~~-~~~l~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~l~~N~~~~~~~ 169 (441)
|+|+ .+|.. +..+++|++|+|++|+|+.+|. .|..+++|+.|+|++|++.+.+.
T Consensus 64 N~l~--~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 64 NQLT--VLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCC--CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCcC--ccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9998 56654 6899999999999999999985 68899999999999999988773
No 127
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=99.67 E-value=2.3e-17 Score=146.36 Aligned_cols=90 Identities=18% Similarity=0.221 Sum_probs=74.9
Q ss_pred CCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCc
Q psy2947 345 TTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGE-GLSSKEVDQIFREANVTMNSK 423 (441)
Q Consensus 345 ~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~-~l~~~~~~~l~~~~d~d~dg~ 423 (441)
.|++|.|++.||..++..... ....+.++.+|+.+|.|++|+|+.+||++++..+|. .+++++++.+|+.+|.|++|.
T Consensus 105 ~d~~g~I~~~EF~~~~~~~~~-~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D~d~dG~ 183 (219)
T 3cs1_A 105 LENKGSEDFVEFLEFRLMLCY-IYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGS 183 (219)
T ss_dssp HHTSCCCSSBCHHHHHHHHHH-HHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHCTTSSSE
T ss_pred cCCCCcCCHHHHHHHHHHHhc-cchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhCCCCCCc
Confidence 378888998888887644311 112457889999999999999999999999998886 788888999999999999999
Q ss_pred eeHHHHHHHHhc
Q psy2947 424 VRYEDFVKIACA 435 (441)
Q Consensus 424 i~~~ef~~~l~~ 435 (441)
|+|+||+.+|.+
T Consensus 184 I~~~EF~~~~~~ 195 (219)
T 3cs1_A 184 VTFDEFAAWASA 195 (219)
T ss_dssp EEHHHHHHHHHH
T ss_pred EeHHHHHHHHHH
Confidence 999999998864
No 128
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=99.67 E-value=4.7e-16 Score=134.74 Aligned_cols=137 Identities=14% Similarity=0.272 Sum_probs=114.0
Q ss_pred ceecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHH----HhCCCcccHHHHHHHHHhhcCCCC
Q psy2947 258 VFTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGGKLSFPDFLKVMHTHSKAED 331 (441)
Q Consensus 258 ~~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~----~~~~g~i~~~ef~~~~~~~~~~~~ 331 (441)
..++..++..++++|..+|.+ |.| +.+|+..+++.++..++ .++..++ .+++|.|+++||..++.... ..
T Consensus 44 ~~l~~~~~~~l~~~F~~~D~d~~G~i-~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~--~~ 119 (191)
T 3k21_A 44 QQSNDYDVEKLKSTFLVLDEDGKGYI-TKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRK--QL 119 (191)
T ss_dssp HHCCCHHHHHHHHHHHHHCTTCSSEE-CHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGG--GC
T ss_pred HHCCHHHHHHHHHHHHHHCCCCCCCC-cHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhh--hc
Confidence 345788999999999999986 888 89999999999987766 5555555 47899999999999985443 35
Q ss_pred CHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccC-CCCh---HHHHHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 332 IPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKA-EDIP---KEVVDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 332 ~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~-~~~~---~~~~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
..+.+..+|+.+|.|++|.|+.+||..++.....+ .... +++..+|+.+|.|+||.|+++||.++|+
T Consensus 120 ~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 120 SKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp CHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 67889999999999999999999999999874322 2222 4689999999999999999999999874
No 129
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.67 E-value=8.6e-17 Score=150.72 Aligned_cols=175 Identities=19% Similarity=0.213 Sum_probs=117.7
Q ss_pred CCCcccEEeccCCC----cCcccCCCCCCCEEEccCCCCC-cCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCC-CCC
Q psy2947 59 YFSHAFLLSLSYTP----IGRRIFKCDTVEVLSLKSNSLT-SLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCK-NLT 132 (441)
Q Consensus 59 ~l~~L~~l~l~~n~----i~~~~~~l~~L~~L~l~~n~l~-~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~-~L~ 132 (441)
.+++|++|++++|. +|..+..+++|++|+|++|.++ .+|..+..+++|++|++++|.++ +.+|..+..++ +|+
T Consensus 99 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~l~~l~~~L~ 177 (313)
T 1ogq_A 99 KLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRIS-GAIPDSYGSFSKLFT 177 (313)
T ss_dssp GCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCE-EECCGGGGCCCTTCC
T ss_pred cCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCccc-CcCCHHHhhhhhcCc
Confidence 57888999998884 4667888899999999999988 78888889999999999999987 78888888887 889
Q ss_pred EEEccCCCCC-ccchhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhc
Q psy2947 133 HLYLDNNLLD-ALPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQS 210 (441)
Q Consensus 133 ~L~l~~n~l~-~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~ 210 (441)
+|++++|+++ .+|..+..++ |+.|++++|.+. +.+|..+..++.+..+ +.+|.+...++.+..++.|+
T Consensus 178 ~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~---------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~ 247 (313)
T 1ogq_A 178 SMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLE---------GDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLN 247 (313)
T ss_dssp EEECCSSEEEEECCGGGGGCC-CSEEECCSSEEE---------ECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCC
T ss_pred EEECcCCeeeccCChHHhCCc-ccEEECcCCccc---------CcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCC
Confidence 9999999885 6777777776 888888888743 2234444444444444 44454443333444455555
Q ss_pred ccccccccCCCCCCCchhhhHHHhhhcCCcccccc
Q psy2947 211 VIASKENFFEPGLFPGPLVDYIAREYNQYHVCHYC 245 (441)
Q Consensus 211 ~l~l~~n~~~~~~~p~~~~~~l~~~~~~~~~~~~~ 245 (441)
.|++++|.+. +.+|..+..........+..+.+.
T Consensus 248 ~L~Ls~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~ 281 (313)
T 1ogq_A 248 GLDLRNNRIY-GTLPQGLTQLKFLHSLNVSFNNLC 281 (313)
T ss_dssp EEECCSSCCE-ECCCGGGGGCTTCCEEECCSSEEE
T ss_pred EEECcCCccc-CcCChHHhcCcCCCEEECcCCccc
Confidence 5555555443 224444433323333333334333
No 130
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.67 E-value=3.8e-16 Score=143.28 Aligned_cols=154 Identities=24% Similarity=0.265 Sum_probs=127.5
Q ss_pred CCCCcccEEeccCCCcC--cccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEE
Q psy2947 58 QYFSHAFLLSLSYTPIG--RRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHL 134 (441)
Q Consensus 58 ~~l~~L~~l~l~~n~i~--~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 134 (441)
..+++|+.|++++|.+. ..+..+++|++|++++|.++.+|+. |..+++|++|++++|.++ +..|..+..+++|++|
T Consensus 60 ~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L 138 (272)
T 3rfs_A 60 QYLPNVRYLALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYL 138 (272)
T ss_dssp GGCTTCCEEECTTSCCCCCGGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEE
T ss_pred ccCCCCcEEECCCCCCCCchhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCC-ccCHHHhccCCCCCEE
Confidence 34889999999999653 4678899999999999999988776 789999999999999998 4444457899999999
Q ss_pred EccCCCCCccc-hhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCch-hhhhhhhcc
Q psy2947 135 YLDNNLLDALP-GFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSR-LQDLAVQSV 211 (441)
Q Consensus 135 ~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~-l~~l~~l~~ 211 (441)
++++|+++.+| ..+..+++|+.|++++|.+... .+..+..++.+..+ +.+|.+..+|+. +..++.|+.
T Consensus 139 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---------~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 209 (272)
T 3rfs_A 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSL---------PEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQY 209 (272)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC---------CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred ECCCCccCccCHHHhccCccCCEEECCCCCcCcc---------CHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCE
Confidence 99999999887 4568899999999999986432 23445667777777 888888777654 688999999
Q ss_pred cccccccCCC
Q psy2947 212 IASKENFFEP 221 (441)
Q Consensus 212 l~l~~n~~~~ 221 (441)
+++++|++.+
T Consensus 210 L~l~~N~~~~ 219 (272)
T 3rfs_A 210 IWLHDNPWDC 219 (272)
T ss_dssp EECCSSCBCC
T ss_pred EEccCCCccc
Confidence 9999999875
No 131
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.67 E-value=4.7e-17 Score=146.37 Aligned_cols=171 Identities=13% Similarity=0.073 Sum_probs=129.6
Q ss_pred cCCCCCccCC--C--CccCC-CCCCCCCCcccEEeccCCCc---Cc-ccCCCCCCCEEEccCCC-CCcCCc-CccCCCCC
Q psy2947 38 ACQRNCSLEV--G--GICSH-IWIPQYFSHAFLLSLSYTPI---GR-RIFKCDTVEVLSLKSNS-LTSLPP-DIGRLTNL 106 (441)
Q Consensus 38 ~C~~~c~~~~--~--~~c~~-~~~~~~l~~L~~l~l~~n~i---~~-~~~~l~~L~~L~l~~n~-l~~lp~-~~~~l~~L 106 (441)
.||..|.|.. + +.|.. ..+|....+|+.|++++|.| |. .+..+++|++|++++|. ++.+|+ .|..+++|
T Consensus 3 ~cp~~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L 82 (239)
T 2xwt_C 3 CSSPPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKV 82 (239)
T ss_dssp CCSSSCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTC
T ss_pred CCCCCCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCC
Confidence 5999999954 3 34865 33444345899999999954 33 57789999999999997 998887 48999999
Q ss_pred cEEEccC-CcCCCCCCc-hhhhcCCCCCEEEccCCCCCccchhhcCCCCCC---EEEccCC-cCccCccccccccccccc
Q psy2947 107 RVLCLTD-NCLQNASIP-FTLTFCKNLTHLYLDNNLLDALPGFLLSMPQLD---TVYRHGN-HNYFKSTFMWYHSDIHAR 180 (441)
Q Consensus 107 ~~L~l~~-n~l~~~~~p-~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~---~L~l~~N-~~~~~~~~~~~~~~~p~~ 180 (441)
++|++++ |.++ .+| ..+..+++|++|++++|+++.+|. +..+++|+ .|++++| .+.... +..
T Consensus 83 ~~L~l~~~n~l~--~i~~~~f~~l~~L~~L~l~~n~l~~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~---------~~~ 150 (239)
T 2xwt_C 83 THIEIRNTRNLT--YIDPDALKELPLLKFLGIFNTGLKMFPD-LTKVYSTDIFFILEITDNPYMTSIP---------VNA 150 (239)
T ss_dssp CEEEEEEETTCC--EECTTSEECCTTCCEEEEEEECCCSCCC-CTTCCBCCSEEEEEEESCTTCCEEC---------TTT
T ss_pred cEEECCCCCCee--EcCHHHhCCCCCCCEEeCCCCCCccccc-cccccccccccEEECCCCcchhhcC---------ccc
Confidence 9999998 9998 566 467889999999999999988987 77888888 9999999 653221 234
Q ss_pred ccccchhH-HH-HhhcccccCCchhhhhhhhccccccccc-CC
Q psy2947 181 IRSTSTRD-EV-LRKQKKLHQPSRLQDLAVQSVIASKENF-FE 220 (441)
Q Consensus 181 l~~l~~~~-~~-l~~~~~~~~p~~l~~l~~l~~l~l~~n~-~~ 220 (441)
+..++.+. .+ +.+|.+..+|......+.|+.+++++|. +.
T Consensus 151 ~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~ 193 (239)
T 2xwt_C 151 FQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLT 193 (239)
T ss_dssp TTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCC
T ss_pred ccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcc
Confidence 55566665 55 6677777777655555778888888774 44
No 132
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=99.67 E-value=2.8e-16 Score=137.61 Aligned_cols=152 Identities=16% Similarity=0.194 Sum_probs=120.3
Q ss_pred ccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCCCHHH
Q psy2947 262 KTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIPKE 335 (441)
Q Consensus 262 ~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~~~~~ 335 (441)
..++..+++.|..+|.+ |.| +..|+..+++.++..++..++..++. +++|.|+++||..++...... ...+.
T Consensus 33 ~~~~~~l~~~F~~~D~d~~G~i-~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~-~~~~~ 110 (204)
T 3e3r_A 33 ASGIQGLARFFRQLDRDGSRSL-DADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQ-AREAV 110 (204)
T ss_dssp -------CHHHHHHCTTCCSSB-CHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCH-HHHHH
T ss_pred chhHHHHHHHHHHHccCCCCCc-CHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCc-hHHHH
Confidence 45678889999999976 889 89999999999999999988888775 689999999999998643221 23567
Q ss_pred HHHHHHhhcCCCCCcccHHHHHHHHHhh------ccCCCChHHHHHHHHHhCC-CCCCcccHHHHHHHHHHhCC-CCCHH
Q psy2947 336 VVDAFKAADTTKSGKLSFPDFLKVMHTH------SKAEDIPKEVVDAFKAADT-TKSGTVPAKYLKHVLVNWGE-GLSSK 407 (441)
Q Consensus 336 ~~~~f~~~D~d~~g~i~~~ef~~~~~~~------~~~~~~~~~~~~~f~~~D~-~~~G~is~~ef~~~l~~~~~-~l~~~ 407 (441)
+..+|+.+|.|++|.|+.+||..++... .......+.++.+|+.+|. |++|.|+++||..++..++. -.+++
T Consensus 111 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~~~~~~d~ 190 (204)
T 3e3r_A 111 IAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVSASMNTDE 190 (204)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHHHHCSSHH
T ss_pred HHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcCccCCChH
Confidence 9999999999999999999999988743 1233445679999999999 99999999999999998773 34677
Q ss_pred HHHHHHHH
Q psy2947 408 EVDQIFRE 415 (441)
Q Consensus 408 ~~~~l~~~ 415 (441)
+.+.+++.
T Consensus 191 ~f~~~~~~ 198 (204)
T 3e3r_A 191 EFVAMMTS 198 (204)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777664
No 133
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=99.66 E-value=2.4e-16 Score=138.91 Aligned_cols=127 Identities=17% Similarity=0.326 Sum_probs=108.5
Q ss_pred Hh-CCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCC
Q psy2947 308 AE-KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSG 386 (441)
Q Consensus 308 ~~-~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G 386 (441)
.+ ++|.|+.+||..++..........+.+..+|+.+|.|++|.|+++||..++.... .....+.++.+|+.+|.|++|
T Consensus 30 ~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~-~~~~~~~l~~~F~~~D~d~~G 108 (211)
T 2ggz_A 30 MEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIM-QEKMEQKLKWYFKLYDADGNG 108 (211)
T ss_dssp HHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHS-CSSHHHHHHHHHHHHCTTCSS
T ss_pred HhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhc-cCchHHHHHHHHHHhcCCCCC
Confidence 56 8999999999999875433222345699999999999999999999999998764 334567899999999999999
Q ss_pred cccHHHHHHHHHHhC-----CCCCH-HHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 387 TVPAKYLKHVLVNWG-----EGLSS-KEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 387 ~is~~ef~~~l~~~~-----~~l~~-~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.|+.+||++++..++ ..++. +.++.+|+.+|.|++|.|+|+||+.++.+
T Consensus 109 ~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 163 (211)
T 2ggz_A 109 SIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAK 163 (211)
T ss_dssp SBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHT
T ss_pred cCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHh
Confidence 999999999999886 55665 45899999999999999999999999864
No 134
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=99.66 E-value=1.2e-16 Score=132.19 Aligned_cols=133 Identities=19% Similarity=0.330 Sum_probs=113.5
Q ss_pred chHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHH-----hCCCcccHHHHHHHHHhh--c---CCCC
Q psy2947 264 PYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLA-----EKGGKLSFPDFLKVMHTH--S---KAED 331 (441)
Q Consensus 264 ~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~-----~~~g~i~~~ef~~~~~~~--~---~~~~ 331 (441)
++.+++++|..+|.+ |.| +..++..+++.++..++..++..++. +++|.|+++||..++... . ....
T Consensus 2 ~~~~l~~~F~~~D~d~~G~i-~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 80 (148)
T 1m45_A 2 ATRANKDIFTLFDKKGQGAI-AKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKA 80 (148)
T ss_dssp -CCCCTTCHHHHCTTCCSEE-EGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCC
T ss_pred hHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccc
Confidence 345677889999976 888 89999999999999999988888764 568999999999999876 2 3345
Q ss_pred CHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 332 IPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 332 ~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
..+.+..+|+.+|.|++|.|+.+||+.++... +.....+++..+|+.+|.+++|.|+++||.+++.
T Consensus 81 ~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~-g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1m45_A 81 KTEDFVKAFQVFDKESTGKVSVGDLRYMLTGL-GEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL 146 (148)
T ss_dssp CTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHS-TTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc-CCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 67889999999999999999999999999877 4455678899999999999999999999999885
No 135
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.66 E-value=1.8e-16 Score=146.74 Aligned_cols=158 Identities=25% Similarity=0.289 Sum_probs=134.1
Q ss_pred CCcccEEeccCCCc----CcccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEE
Q psy2947 60 FSHAFLLSLSYTPI----GRRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLY 135 (441)
Q Consensus 60 l~~L~~l~l~~n~i----~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~ 135 (441)
.++|+.|++++|.| +..+..+++|++|+|++|.|+.+|.. ..+++|+.|++++|.++ .+|..+..+++|++|+
T Consensus 30 ~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~~L~Ls~N~l~--~l~~~~~~l~~L~~L~ 106 (290)
T 1p9a_G 30 PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGTLDLSHNQLQ--SLPLLGQTLPALTVLD 106 (290)
T ss_dssp CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCCEEECCSSCCS--SCCCCTTTCTTCCEEE
T ss_pred CCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCCEEECCCCcCC--cCchhhccCCCCCEEE
Confidence 36899999999965 35688899999999999999988765 78999999999999998 8999899999999999
Q ss_pred ccCCCCCccc-hhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCch-hhhhhhhccc
Q psy2947 136 LDNNLLDALP-GFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSR-LQDLAVQSVI 212 (441)
Q Consensus 136 l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~-l~~l~~l~~l 212 (441)
+++|+|+.+| ..|..+++|+.|++++|++.... +..+..++.+..+ +.+|.+..+|.. +..++.|+.|
T Consensus 107 l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~---------~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L 177 (290)
T 1p9a_G 107 VSFNRLTSLPLGALRGLGELQELYLKGNELKTLP---------PGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTL 177 (290)
T ss_dssp CCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCC---------TTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEE
T ss_pred CCCCcCcccCHHHHcCCCCCCEEECCCCCCCccC---------hhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEE
Confidence 9999999987 67899999999999999964322 3345667777777 889999998865 4779999999
Q ss_pred ccccccCCCCCCCchhhhH
Q psy2947 213 ASKENFFEPGLFPGPLVDY 231 (441)
Q Consensus 213 ~l~~n~~~~~~~p~~~~~~ 231 (441)
++++|.+.. +|..+...
T Consensus 178 ~L~~N~l~~--ip~~~~~~ 194 (290)
T 1p9a_G 178 LLQENSLYT--IPKGFFGS 194 (290)
T ss_dssp ECCSSCCCC--CCTTTTTT
T ss_pred ECCCCcCCc--cChhhccc
Confidence 999998874 88776553
No 136
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.66 E-value=5.8e-16 Score=131.89 Aligned_cols=114 Identities=25% Similarity=0.361 Sum_probs=96.6
Q ss_pred CCcCCCCCccCCCCccCCCCCCCCCCcccEEeccCC---CcCcccCCCCCCCEEEccCCCCCcCCc-CccCCCCCcEEEc
Q psy2947 36 QTACQRNCSLEVGGICSHIWIPQYFSHAFLLSLSYT---PIGRRIFKCDTVEVLSLKSNSLTSLPP-DIGRLTNLRVLCL 111 (441)
Q Consensus 36 ~~~C~~~c~~~~~~~c~~~~~~~~l~~L~~l~l~~n---~i~~~~~~l~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~l 111 (441)
..+||..|+|.. +.+++++| .+|..+. ++|++|+|++|+|+.+++ .|..+++|+.|+|
T Consensus 3 ~~~CP~~C~C~~----------------~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 64 (174)
T 2r9u_A 3 SAGCPSQCSCDQ----------------TLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYF 64 (174)
T ss_dssp CCSSCTTSEECS----------------SEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCCCCCEECC----------------cEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEEC
Confidence 357999999942 35666666 5666554 899999999999998754 5999999999999
Q ss_pred cCCcCCCCCCchh-hhcCCCCCEEEccCCCCCccch-hhcCCCCCCEEEccCCcCccCcc
Q psy2947 112 TDNCLQNASIPFT-LTFCKNLTHLYLDNNLLDALPG-FLLSMPQLDTVYRHGNHNYFKST 169 (441)
Q Consensus 112 ~~n~l~~~~~p~~-~~~l~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~l~~N~~~~~~~ 169 (441)
++|+|+ .+|.. +..+++|++|+|++|+|+.+|. .|..+++|+.|+|++|++.+.+.
T Consensus 65 s~N~l~--~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 65 NSNKLT--AIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CSSCCC--CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred CCCCCC--ccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 999998 67765 5899999999999999999985 48899999999999999887763
No 137
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.66 E-value=4.5e-17 Score=167.48 Aligned_cols=157 Identities=11% Similarity=0.126 Sum_probs=137.7
Q ss_pred CCCcccEEeccCC---C------------------cCcccC--CCCCCCEEEccCCCCC-cCCcCccCCCCCcEEEccCC
Q psy2947 59 YFSHAFLLSLSYT---P------------------IGRRIF--KCDTVEVLSLKSNSLT-SLPPDIGRLTNLRVLCLTDN 114 (441)
Q Consensus 59 ~l~~L~~l~l~~n---~------------------i~~~~~--~l~~L~~L~l~~n~l~-~lp~~~~~l~~L~~L~l~~n 114 (441)
.+++|+.|+|++| . +|..++ ++++|++|+|++|.+. .+|..|+.+++|++|++++|
T Consensus 204 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n 283 (636)
T 4eco_A 204 RLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACN 283 (636)
T ss_dssp GCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTC
T ss_pred cccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCC
Confidence 5789999999999 3 888888 9999999999999987 89999999999999999999
Q ss_pred c-CCCC-CCchhhhcC------CCCCEEEccCCCCCccch--hhcCCCCCCEEEccCCcCccCccccccccccccccccc
Q psy2947 115 C-LQNA-SIPFTLTFC------KNLTHLYLDNNLLDALPG--FLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRST 184 (441)
Q Consensus 115 ~-l~~~-~~p~~~~~l------~~L~~L~l~~n~l~~lp~--~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l 184 (441)
+ ++ | .+|..++.+ ++|++|++++|+++.+|. .++.+++|+.|++++|.+ .+.+| .+..+
T Consensus 284 ~~l~-~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l---------~g~ip-~~~~l 352 (636)
T 4eco_A 284 RGIS-GEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQL---------EGKLP-AFGSE 352 (636)
T ss_dssp TTSC-HHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCC---------EEECC-CCEEE
T ss_pred CCCc-cccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcC---------ccchh-hhCCC
Confidence 8 88 6 799998887 999999999999999998 999999999999999994 34566 67777
Q ss_pred chhHHH-HhhcccccCCchhhhhhh-hcccccccccCCCCCCCchh
Q psy2947 185 STRDEV-LRKQKKLHQPSRLQDLAV-QSVIASKENFFEPGLFPGPL 228 (441)
Q Consensus 185 ~~~~~~-l~~~~~~~~p~~l~~l~~-l~~l~l~~n~~~~~~~p~~~ 228 (441)
+.+..+ +.+|.+..+|..+..++. |+.|++++|.+. .+|..+
T Consensus 353 ~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~--~lp~~~ 396 (636)
T 4eco_A 353 IKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK--YIPNIF 396 (636)
T ss_dssp EEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS--SCCSCC
T ss_pred CCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc--ccchhh
Confidence 777777 888888888888888888 999999988776 377654
No 138
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=99.66 E-value=5.8e-16 Score=121.11 Aligned_cols=100 Identities=18% Similarity=0.325 Sum_probs=90.4
Q ss_pred CCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh---CCCCCH
Q psy2947 330 EDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW---GEGLSS 406 (441)
Q Consensus 330 ~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~---~~~l~~ 406 (441)
..+.+++..+|+.+| ++|.|+++||..++... ....+.++.+|+.+|+|++|+|+.+||+.++..+ |.++++
T Consensus 6 ~~~~~ei~~~~~~~D--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~ 80 (109)
T 3fs7_A 6 ILSAKDIESALSSCQ--AADSFNYKSFFSTVGLS---SKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTS 80 (109)
T ss_dssp TSCHHHHHHHHHHTC--STTCCCHHHHHHHHTCT---TCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCH
T ss_pred cCCHHHHHHHHHhcC--CCCcCcHHHHHHHHhcC---CCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCH
Confidence 356788899999998 79999999999988642 3446789999999999999999999999999998 888999
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 407 KEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 407 ~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
++++.+++.+|.|++|.|+|+||++++.
T Consensus 81 ~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 81 AETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 9999999999999999999999999885
No 139
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=99.66 E-value=5.4e-17 Score=132.19 Aligned_cols=101 Identities=17% Similarity=0.278 Sum_probs=67.6
Q ss_pred HHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhC-CCCCHHHHHHHH
Q psy2947 335 EVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWG-EGLSSKEVDQIF 413 (441)
Q Consensus 335 ~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~-~~l~~~~~~~l~ 413 (441)
..+.+|+.+|.|++|.|+++||..++..........+.++.+|+.+|++++|+|+.+||+.+++.+| ..+++++++.++
T Consensus 4 ~~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~ 83 (135)
T 3h4s_E 4 TEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMV 83 (135)
T ss_dssp ---------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHH
T ss_pred hHHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHH
Confidence 3567889999999999999999998876433333356789999999999999999999999999999 499999999999
Q ss_pred HHhCCCCCCceeHHHHHHHHhc
Q psy2947 414 REANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 414 ~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+.+|.|++|.|+|+||+.+|.+
T Consensus 84 ~~~D~d~dG~I~~~EF~~~~~~ 105 (135)
T 3h4s_E 84 REGDLDGDGALNQTEFCVLMVR 105 (135)
T ss_dssp HHHCSSCSSSBCHHHHHHHHHH
T ss_pred HHhCCCCCCCCcHHHHHHHHHH
Confidence 9999999999999999999864
No 140
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.66 E-value=9e-16 Score=145.07 Aligned_cols=124 Identities=22% Similarity=0.357 Sum_probs=100.0
Q ss_pred cCCCCCccCCC-CccCCCC---CCCC-CCcccEEeccCCCc----CcccCCCCCCCEEEccCCCCCcC-CcCccCCCCCc
Q psy2947 38 ACQRNCSLEVG-GICSHIW---IPQY-FSHAFLLSLSYTPI----GRRIFKCDTVEVLSLKSNSLTSL-PPDIGRLTNLR 107 (441)
Q Consensus 38 ~C~~~c~~~~~-~~c~~~~---~~~~-l~~L~~l~l~~n~i----~~~~~~l~~L~~L~l~~n~l~~l-p~~~~~l~~L~ 107 (441)
.||..|.|... +.|...+ +|.. .++|+.|++++|.+ |..+..+++|++|+|++|+++.+ |..|..+++|+
T Consensus 26 ~cp~~c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 105 (332)
T 2ft3_A 26 MCPFGCHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQ 105 (332)
T ss_dssp CCCSSCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCC
T ss_pred CCCCCCcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCC
Confidence 49999988543 5566533 3332 36899999999954 34678899999999999999966 55699999999
Q ss_pred EEEccCCcCCCCCCchhhhcCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCcCc
Q psy2947 108 VLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLDALP-GFLLSMPQLDTVYRHGNHNY 165 (441)
Q Consensus 108 ~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~ 165 (441)
+|++++|.++ .+|..+. ++|++|++++|+++.+| ..+..+++|+.|++++|.+.
T Consensus 106 ~L~L~~n~l~--~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~ 160 (332)
T 2ft3_A 106 KLYISKNHLV--EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLE 160 (332)
T ss_dssp EEECCSSCCC--SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCB
T ss_pred EEECCCCcCC--ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccc
Confidence 9999999998 7887665 78999999999998887 45888999999999998874
No 141
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=99.66 E-value=1.1e-15 Score=119.39 Aligned_cols=100 Identities=19% Similarity=0.378 Sum_probs=90.3
Q ss_pred CCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh---CCCCCHH
Q psy2947 331 DIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW---GEGLSSK 407 (441)
Q Consensus 331 ~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~---~~~l~~~ 407 (441)
.+.++++.+|+.+|. +|.|+++||..++... ....+.++.+|+.+|+|++|.|+.+||+.+++.+ |..++++
T Consensus 6 ~s~~ei~~~~~~~d~--~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~~ 80 (109)
T 5pal_A 6 LKADDINKAISAFKD--PGTFDYKRFFHLVGLK---GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDT 80 (109)
T ss_dssp SCHHHHHHHHHHTCS--TTCCCHHHHHHHHTCT---TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHH
T ss_pred CCHHHHHHHHHHhCC--CCcCcHHHHHHHHhhc---cCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCHH
Confidence 567888999999997 8999999999988642 3446789999999999999999999999999998 8999999
Q ss_pred HHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 408 EVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 408 ~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+++.+++.+|.|++|.|+|+||+.+|.+
T Consensus 81 ~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 81 ETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp HHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 9999999999999999999999998864
No 142
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.65 E-value=1e-15 Score=144.59 Aligned_cols=123 Identities=22% Similarity=0.321 Sum_probs=82.2
Q ss_pred cCCCCCccCCC-CccCCCC---CCCC-CCcccEEeccCCCc---C-cccCCCCCCCEEEccCCCCCcC-CcCccCCCCCc
Q psy2947 38 ACQRNCSLEVG-GICSHIW---IPQY-FSHAFLLSLSYTPI---G-RRIFKCDTVEVLSLKSNSLTSL-PPDIGRLTNLR 107 (441)
Q Consensus 38 ~C~~~c~~~~~-~~c~~~~---~~~~-l~~L~~l~l~~n~i---~-~~~~~l~~L~~L~l~~n~l~~l-p~~~~~l~~L~ 107 (441)
.||..|.|... +.|...+ +|.. .++|+.|++++|.| + ..+..+++|++|+|++|.++.+ |..|..+++|+
T Consensus 24 ~cp~~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (330)
T 1xku_A 24 VCPFRCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 103 (330)
T ss_dssp CCCTTCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCC
T ss_pred CCCCCCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCC
Confidence 49999988544 5566532 3332 35788889888844 3 3577788888888888888866 66688888888
Q ss_pred EEEccCCcCCCCCCchhhhcCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCcC
Q psy2947 108 VLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLDALP-GFLLSMPQLDTVYRHGNHN 164 (441)
Q Consensus 108 ~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~ 164 (441)
+|++++|.++ .+|..+. ++|++|++++|.++.++ ..+..+++|+.|++++|.+
T Consensus 104 ~L~Ls~n~l~--~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 157 (330)
T 1xku_A 104 RLYLSKNQLK--ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPL 157 (330)
T ss_dssp EEECCSSCCS--BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCC
T ss_pred EEECCCCcCC--ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcC
Confidence 8888888886 6665443 45666666666665554 3345555555555555544
No 143
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=99.65 E-value=1.7e-15 Score=118.36 Aligned_cols=100 Identities=18% Similarity=0.319 Sum_probs=89.5
Q ss_pred CCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh---CCCCCHH
Q psy2947 331 DIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW---GEGLSSK 407 (441)
Q Consensus 331 ~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~---~~~l~~~ 407 (441)
.+.+++..+|+.+| ++|.|+++||..++... ....+.++.+|+.+|.+++|+|+.+||+++++.+ |.+++++
T Consensus 6 ~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~ 80 (109)
T 1rwy_A 6 LSAEDIKKAIGAFT--AADSFDHKKFFQMVGLK---KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAK 80 (109)
T ss_dssp SCHHHHHHHHHTTC--STTCCCHHHHHHHHTGG---GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHH
T ss_pred CCHHHHHHHHHHcC--CCCcEeHHHHHHHHhcC---cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCHH
Confidence 45678888888898 88999999999988532 2346789999999999999999999999999998 7889999
Q ss_pred HHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 408 EVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 408 ~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+++.+++.+|.|++|.|+|+||+.++.+
T Consensus 81 ~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 81 ETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp HHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 9999999999999999999999998864
No 144
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=99.65 E-value=2e-15 Score=117.95 Aligned_cols=100 Identities=16% Similarity=0.283 Sum_probs=89.5
Q ss_pred CCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh---CCCCCH
Q psy2947 330 EDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW---GEGLSS 406 (441)
Q Consensus 330 ~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~---~~~l~~ 406 (441)
..+.+++..+|+.+| ++|.|+++||..++... ....+.++.+|+.+|.+++|.|+.+||+++++.+ |.++++
T Consensus 6 ~~~~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~ 80 (109)
T 1bu3_A 6 ILADADVAAALKACE--AADSFNYKAFFAKVGLT---AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTD 80 (109)
T ss_dssp SSCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG---GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCH
T ss_pred cCCHHHHHHHHHHhC--CCCcCcHHHHHHHHHcC---hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCH
Confidence 456788888899998 88999999999987543 2346789999999999999999999999999999 788999
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 407 KEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 407 ~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
++++.+++.+|.|++|.|+|+||+.++.
T Consensus 81 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 81 AETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 9999999999999999999999999875
No 145
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.64 E-value=9.6e-17 Score=168.68 Aligned_cols=177 Identities=12% Similarity=0.114 Sum_probs=144.8
Q ss_pred CCCcccEEeccCC---C------------------cCcccC--CCCCCCEEEccCCCCC-cCCcCccCCCCCcEEEccCC
Q psy2947 59 YFSHAFLLSLSYT---P------------------IGRRIF--KCDTVEVLSLKSNSLT-SLPPDIGRLTNLRVLCLTDN 114 (441)
Q Consensus 59 ~l~~L~~l~l~~n---~------------------i~~~~~--~l~~L~~L~l~~n~l~-~lp~~~~~l~~L~~L~l~~n 114 (441)
.+++|+.|+|++| . ||..++ ++++|++|+|++|.+. .+|..|+.+++|+.|++++|
T Consensus 446 ~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N 525 (876)
T 4ecn_A 446 RLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACN 525 (876)
T ss_dssp GCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTC
T ss_pred cCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCC
Confidence 5789999999999 3 777777 9999999999999977 89999999999999999999
Q ss_pred c-CCCC-CCchhhhcCC-------CCCEEEccCCCCCccch--hhcCCCCCCEEEccCCcCccCcccccccccccccccc
Q psy2947 115 C-LQNA-SIPFTLTFCK-------NLTHLYLDNNLLDALPG--FLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRS 183 (441)
Q Consensus 115 ~-l~~~-~~p~~~~~l~-------~L~~L~l~~n~l~~lp~--~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~ 183 (441)
+ ++ | .+|..++.++ +|++|+|++|+|+.+|. .++++++|+.|++++|.+. .+| .+..
T Consensus 526 ~~ls-g~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~Ls~N~l~----------~lp-~~~~ 593 (876)
T 4ecn_A 526 RGIS-AAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVR----------HLE-AFGT 593 (876)
T ss_dssp TTSC-HHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEECTTSCCC----------BCC-CCCT
T ss_pred CCcc-cccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCCCCCEEECCCCCcc----------cch-hhcC
Confidence 8 87 6 7998887776 99999999999999998 9999999999999999963 345 6777
Q ss_pred cchhHHH-HhhcccccCCchhhhhhh-hcccccccccCCCCCCCchhhhHHH--hhhcCCcccccccCCC
Q psy2947 184 TSTRDEV-LRKQKKLHQPSRLQDLAV-QSVIASKENFFEPGLFPGPLVDYIA--REYNQYHVCHYCNSAE 249 (441)
Q Consensus 184 l~~~~~~-l~~~~~~~~p~~l~~l~~-l~~l~l~~n~~~~~~~p~~~~~~l~--~~~~~~~~~~~~~~~~ 249 (441)
++.+..+ +.+|.+..+|..+..++. |+.|++++|.+. .+|..+...-. .....+..|...+..+
T Consensus 594 L~~L~~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~--~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip 661 (876)
T 4ecn_A 594 NVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK--YIPNIFNAKSVYVMGSVDFSYNKIGSEGR 661 (876)
T ss_dssp TSEESEEECCSSCCSCCCTTSCEECTTCCEEECCSSCCC--SCCSCCCTTCSSCEEEEECCSSCTTTTSS
T ss_pred CCcceEEECcCCccccchHHHhhccccCCEEECcCCCCC--cCchhhhccccCCCCEEECcCCcCCCccc
Confidence 7777777 888888889988999998 999999999876 47765433111 2334444555444433
No 146
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=99.64 E-value=6.4e-16 Score=134.00 Aligned_cols=151 Identities=15% Similarity=0.262 Sum_probs=112.0
Q ss_pred hHHHHHhhhccc---cCCCccCHHHHHHHHHHcCCCc-CHHHHHHHH----HhCCCcccHHHHHHHHHhhcCCCCCHHHH
Q psy2947 265 YLEFRECFFLFA---RNGTIKTLDELSVIMRSLGMSP-TIAELKKYL----AEKGGKLSFPDFLKVMHTHSKAEDIPKEV 336 (441)
Q Consensus 265 ~~~l~~~f~~~d---~~G~i~~~~el~~~~~~~~~~~-~~~~~~~~~----~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 336 (441)
..+++++|..+| .+|.| +.+++..+++.++... ....+..++ .+++|.|+++||..++..... ....+.+
T Consensus 24 ~~~i~~~f~~fd~~~~~G~i-~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~-~~~~~~~ 101 (193)
T 1bjf_A 24 EHEIQEWYKGFLRDCPSGHL-SMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSR-GKLEQKL 101 (193)
T ss_dssp HHHHHHHHHHHHHHSTTSEE-EHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTS-SCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCc-CHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcC-CCHHHHH
Confidence 345556666666 46889 8999999999887644 344455554 478999999999999987643 3557889
Q ss_pred HHHHHhhcCCCCCcccHHHHHHHHHhhcc--C---C------CChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCC
Q psy2947 337 VDAFKAADTTKSGKLSFPDFLKVMHTHSK--A---E------DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLS 405 (441)
Q Consensus 337 ~~~f~~~D~d~~g~i~~~ef~~~~~~~~~--~---~------~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~ 405 (441)
+.+|+.+|.|++|.|+++||..++..... + . ...+.+..+|+.+|.|++|.|+++||++++..
T Consensus 102 ~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~------ 175 (193)
T 1bjf_A 102 KWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS------ 175 (193)
T ss_dssp HHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHH------
T ss_pred HHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc------
Confidence 99999999999999999999998876411 1 1 12356899999999999999999999999964
Q ss_pred HHHHHHHHHHhCCCCCCce
Q psy2947 406 SKEVDQIFREANVTMNSKV 424 (441)
Q Consensus 406 ~~~~~~l~~~~d~d~dg~i 424 (441)
+.++..+| .+|.|++|.|
T Consensus 176 ~~~~~~~~-~~D~~~dG~i 193 (193)
T 1bjf_A 176 DPSIVRLL-QCDPSSAGQF 193 (193)
T ss_dssp CTHHHHTT-CC--------
T ss_pred CHHHHHHh-ccCCCCCCCC
Confidence 35678889 9999999976
No 147
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=99.64 E-value=2.5e-16 Score=137.12 Aligned_cols=139 Identities=15% Similarity=0.263 Sum_probs=109.0
Q ss_pred eecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCCC
Q psy2947 259 FTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDI 332 (441)
Q Consensus 259 ~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~~ 332 (441)
.++..++..+++.|..+|.+ |.| +.+|+..+++.++..++..++..++. +++|.|+++||+.++..... ...
T Consensus 50 ~l~~~e~~~l~~~F~~~D~d~~G~I-s~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~-~~~ 127 (197)
T 3pm8_A 50 HLCDVEINNLRNIFIALDVDNSGTL-SSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQT-YLK 127 (197)
T ss_dssp HCCHHHHHHHHHHHHHHCTTCSSEE-CHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCCHHH-HCS
T ss_pred HCCHHHHHHHHHHHHHHCCCCCCcC-CHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHh-hhh
Confidence 45678899999999999976 888 89999999999988888888877775 68899999999997754321 245
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhc-cCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHS-KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~-~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
.+.++.+|+.+|.|++|.|+.+||..++.... .....++.+..+|+.+|.|++|.|+++||..+|+.
T Consensus 128 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 195 (197)
T 3pm8_A 128 KEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK 195 (197)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHc
Confidence 67899999999999999999999999997652 12234578999999999999999999999999864
No 148
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.64 E-value=3.7e-16 Score=149.02 Aligned_cols=151 Identities=17% Similarity=0.195 Sum_probs=122.2
Q ss_pred CCcccEEeccCCCc---Cc-ccCCCCCCCEEEccCCCCCcCCc-CccCCCCCcEEEccCCcCCCCCCchh-hhcCCCCCE
Q psy2947 60 FSHAFLLSLSYTPI---GR-RIFKCDTVEVLSLKSNSLTSLPP-DIGRLTNLRVLCLTDNCLQNASIPFT-LTFCKNLTH 133 (441)
Q Consensus 60 l~~L~~l~l~~n~i---~~-~~~~l~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~l~~n~l~~~~~p~~-~~~l~~L~~ 133 (441)
.++|+.|++++|.+ |. .+..+++|++|++++|+++.+++ .|..+++|++|++++|.++ .+|.. +..+++|++
T Consensus 51 ~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~--~~~~~~~~~l~~L~~ 128 (353)
T 2z80_A 51 TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS--NLSSSWFKPLSSLTF 128 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS--SCCHHHHTTCTTCSE
T ss_pred cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCC--cCCHhHhCCCccCCE
Confidence 35899999999954 33 67889999999999999997754 5999999999999999998 67765 799999999
Q ss_pred EEccCCCCCccch--hhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccC-Cchhhhhhhh
Q psy2947 134 LYLDNNLLDALPG--FLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQ-PSRLQDLAVQ 209 (441)
Q Consensus 134 L~l~~n~l~~lp~--~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~-p~~l~~l~~l 209 (441)
|++++|+++.+|. .+..+++|+.|++++|.. +....+..+..++.+..+ +.+|.+..+ |..+..+++|
T Consensus 129 L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~--------~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 200 (353)
T 2z80_A 129 LNLLGNPYKTLGETSLFSHLTKLQILRVGNMDT--------FTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNV 200 (353)
T ss_dssp EECTTCCCSSSCSSCSCTTCTTCCEEEEEESSS--------CCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEE
T ss_pred EECCCCCCcccCchhhhccCCCCcEEECCCCcc--------ccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccC
Confidence 9999999999986 788999999999999952 111224456666666666 677776554 6778888888
Q ss_pred cccccccccCC
Q psy2947 210 SVIASKENFFE 220 (441)
Q Consensus 210 ~~l~l~~n~~~ 220 (441)
+.+++++|.+.
T Consensus 201 ~~L~l~~n~l~ 211 (353)
T 2z80_A 201 SHLILHMKQHI 211 (353)
T ss_dssp EEEEEECSCST
T ss_pred CeecCCCCccc
Confidence 88888888653
No 149
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=99.64 E-value=1.9e-15 Score=129.89 Aligned_cols=138 Identities=13% Similarity=0.156 Sum_probs=113.3
Q ss_pred ecccchHHHHHhhhccccCCCccCHHHHHHHHHHcCCC-cCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCCCHH
Q psy2947 260 TFKTPYLEFRECFFLFARNGTIKTLDELSVIMRSLGMS-PTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIPK 334 (441)
Q Consensus 260 l~~~~~~~l~~~f~~~d~~G~i~~~~el~~~~~~~~~~-~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~~~~ 334 (441)
++..++..+.+.|..+|.+|.| +..++..+++.++.. .+..++..++. +++|.|+++||..++..... ....+
T Consensus 15 ~s~~~i~~l~~~fd~~d~~G~i-~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~-~~~~~ 92 (183)
T 1s6c_A 15 FTKRELQVLYRGFKNEXPSGVV-NEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLR-GTVHE 92 (183)
T ss_dssp CCHHHHHHHHHHHHHHCTTSEE-CHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHH-CCHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCcC-CHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcC-CCHHH
Confidence 4567788888888777788999 899999999998765 67777776664 68999999999999986543 34567
Q ss_pred HHHHHHHhhcCCCCCcccHHHHHHHHHhhc---c--------CCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 335 EVVDAFKAADTTKSGKLSFPDFLKVMHTHS---K--------AEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 335 ~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~---~--------~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
.++.+|+.+|.|++|.|+++||..++.... + .....+.+..+|+.+|.|++|.|+++||..++..
T Consensus 93 ~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~ 168 (183)
T 1s6c_A 93 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQE 168 (183)
T ss_dssp HHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTS
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 899999999999999999999999987651 1 1122478999999999999999999999999854
No 150
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.63 E-value=6.9e-16 Score=139.79 Aligned_cols=160 Identities=24% Similarity=0.265 Sum_probs=129.3
Q ss_pred CCccCCCCccCCCCCCCCCCcccEEeccCC---CcCcccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCC
Q psy2947 42 NCSLEVGGICSHIWIPQYFSHAFLLSLSYT---PIGRRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQ 117 (441)
Q Consensus 42 ~c~~~~~~~c~~~~~~~~l~~L~~l~l~~n---~i~~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~ 117 (441)
.|.-|.|..|. ...+.++++++ .+|..+. ++|+.|+|++|.++.+++. |..+++|++|++++|.++
T Consensus 3 ~Cp~~~gC~C~--------~~~~~l~~~~~~l~~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 72 (251)
T 3m19_A 3 TCETVTGCTCN--------EGKKEVDCQGKSLDSVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ 72 (251)
T ss_dssp -CHHHHSSEEE--------GGGTEEECTTCCCSSCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC
T ss_pred cCCCCCceEcC--------CCCeEEecCCCCccccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCC
Confidence 35444567774 35678899888 5565554 6899999999999977664 999999999999999998
Q ss_pred CCCCchhhhcCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-Hhhcc
Q psy2947 118 NASIPFTLTFCKNLTHLYLDNNLLDALP-GFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQK 195 (441)
Q Consensus 118 ~~~~p~~~~~l~~L~~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~ 195 (441)
+..|..+..+++|++|+|++|+|+.+| ..|..+++|++|+|++|.+.... +..+..++.+..+ +.+|.
T Consensus 73 -~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---------~~~~~~l~~L~~L~Ls~N~ 142 (251)
T 3m19_A 73 -TLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLP---------SGVFDRLTKLKELRLNTNQ 142 (251)
T ss_dssp -CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC---------TTTTTTCTTCCEEECCSSC
T ss_pred -ccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcC---------hhHhccCCcccEEECcCCc
Confidence 555556899999999999999999887 66789999999999999964322 3345667777777 88899
Q ss_pred cccCCc-hhhhhhhhcccccccccCCC
Q psy2947 196 KLHQPS-RLQDLAVQSVIASKENFFEP 221 (441)
Q Consensus 196 ~~~~p~-~l~~l~~l~~l~l~~n~~~~ 221 (441)
+..+|+ .+..+++|+.|++++|.+..
T Consensus 143 l~~~~~~~~~~l~~L~~L~L~~N~l~~ 169 (251)
T 3m19_A 143 LQSIPAGAFDKLTNLQTLSLSTNQLQS 169 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCccCHHHcCcCcCCCEEECCCCcCCc
Confidence 988886 68899999999999998764
No 151
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.63 E-value=6.4e-16 Score=152.54 Aligned_cols=153 Identities=18% Similarity=0.153 Sum_probs=113.4
Q ss_pred CcCCCCCccCCC-CccCCCC---CCCCCCcccEEeccCCCc----CcccCCCCCCCEEEccCCCCC-cCCc-CccCCCCC
Q psy2947 37 TACQRNCSLEVG-GICSHIW---IPQYFSHAFLLSLSYTPI----GRRIFKCDTVEVLSLKSNSLT-SLPP-DIGRLTNL 106 (441)
Q Consensus 37 ~~C~~~c~~~~~-~~c~~~~---~~~~l~~L~~l~l~~n~i----~~~~~~l~~L~~L~l~~n~l~-~lp~-~~~~l~~L 106 (441)
.+|+..|.|... +.|...+ +|...++|+.|+|++|.| |..+..+++|++|+|++|.+. .+|+ .|..+++|
T Consensus 2 ~p~~~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L 81 (455)
T 3v47_A 2 DPGTSECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSL 81 (455)
T ss_dssp -----CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTC
T ss_pred CCccceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccC
Confidence 469999998542 7787643 455457899999999954 566888999999999999987 6654 49999999
Q ss_pred cEEEccCCcCCCCCCchhhhcCCCCCEEEccCCCCCc-cch--hhcCCCCCCEEEccCCcCccCccccccccccccc-cc
Q psy2947 107 RVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLDA-LPG--FLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHAR-IR 182 (441)
Q Consensus 107 ~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~-lp~--~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~-l~ 182 (441)
++|++++|.++ +..|..+.++++|++|++++|+++. +|. .+..+++|++|++++|.+... .|.. +.
T Consensus 82 ~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~---------~~~~~~~ 151 (455)
T 3v47_A 82 IILKLDYNQFL-QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKI---------QPASFFL 151 (455)
T ss_dssp CEEECTTCTTC-EECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSC---------CCCGGGG
T ss_pred CEEeCCCCccC-ccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCcc---------CcccccC
Confidence 99999999998 5557788999999999999999975 443 388899999999999986432 2333 55
Q ss_pred ccchhHHH-HhhcccccC
Q psy2947 183 STSTRDEV-LRKQKKLHQ 199 (441)
Q Consensus 183 ~l~~~~~~-l~~~~~~~~ 199 (441)
.++.+..+ +.+|.+..+
T Consensus 152 ~l~~L~~L~L~~n~l~~~ 169 (455)
T 3v47_A 152 NMRRFHVLDLTFNKVKSI 169 (455)
T ss_dssp GCTTCCEEECTTCCBSCC
T ss_pred CCCcccEEeCCCCccccc
Confidence 55555555 666666443
No 152
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=99.63 E-value=3.1e-15 Score=133.45 Aligned_cols=152 Identities=16% Similarity=0.182 Sum_probs=122.0
Q ss_pred eecccchHHHHHhhhccccCCCccCHHHHHHHHHHcCC-CcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCCCH
Q psy2947 259 FTFKTPYLEFRECFFLFARNGTIKTLDELSVIMRSLGM-SPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIP 333 (441)
Q Consensus 259 ~l~~~~~~~l~~~f~~~d~~G~i~~~~el~~~~~~~~~-~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~~~ 333 (441)
.++..++..+.+.|...+.+|.| +.+++..++..+.. ......+..++. +++|.|+++||..++..... ....
T Consensus 60 ~~s~~ei~~l~~~F~~~d~~G~I-s~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~-~~~~ 137 (229)
T 3dd4_A 60 KFTKKELQILYRGFKNECPSGVV-NEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLR-GTVQ 137 (229)
T ss_dssp HHHHHHHHHHHHHHHTTCCSCCC-CHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHH-SCHH
T ss_pred CCCHHHHHHHHHHHHhhCCCCCc-CHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcC-CChH
Confidence 35677888899999888889999 89999999998543 445555556664 68999999999999986643 3456
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHhhc-----------cCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCC
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFLKVMHTHS-----------KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGE 402 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~-----------~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~ 402 (441)
+.++.+|+.+|.|++|.|+++||..++.... ......+.++.+|+.+|.|+||.|+++||.+++..
T Consensus 138 ~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~--- 214 (229)
T 3dd4_A 138 EKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQK--- 214 (229)
T ss_dssp HHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHT---
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh---
Confidence 8899999999999999999999999988652 22334578999999999999999999999999974
Q ss_pred CCCHHHHHHHHHHhCC
Q psy2947 403 GLSSKEVDQIFREANV 418 (441)
Q Consensus 403 ~l~~~~~~~l~~~~d~ 418 (441)
...+..+|+.+|.
T Consensus 215 ---~~~~~~~~~~~D~ 227 (229)
T 3dd4_A 215 ---DENIMRSMQLFEN 227 (229)
T ss_dssp ---CHHHHHHHHHHTT
T ss_pred ---CHHHHHHHHhccc
Confidence 3567778887763
No 153
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=99.63 E-value=1.7e-15 Score=118.21 Aligned_cols=99 Identities=18% Similarity=0.276 Sum_probs=88.7
Q ss_pred CCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh---CCCCCHH
Q psy2947 331 DIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW---GEGLSSK 407 (441)
Q Consensus 331 ~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~---~~~l~~~ 407 (441)
.+.+++..+|+.+| ++|.|+++||..++... ....+.++.+|+.+|.+++|+|+.+||+.+++.+ |.+++++
T Consensus 6 ~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~ 80 (108)
T 2pvb_A 6 LKDADVAAALAACS--AADSFKHKEFFAKVGLA---SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDA 80 (108)
T ss_dssp SCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG---GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHH
T ss_pred CCHHHHHHHHHHhC--CCCcCcHHHHHHHHhCC---hhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHH
Confidence 56778888888888 78999999999988542 2346789999999999999999999999999998 7889999
Q ss_pred HHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 408 EVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 408 ~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
+++.+++.+|.|++|.|+|+||+.++.
T Consensus 81 ~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 81 ETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 999999999999999999999999875
No 154
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.63 E-value=1e-15 Score=157.29 Aligned_cols=152 Identities=20% Similarity=0.225 Sum_probs=121.9
Q ss_pred CccCCC---CCCCCCC-cccEEeccCCCc---C-cccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCC
Q psy2947 49 GICSHI---WIPQYFS-HAFLLSLSYTPI---G-RRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNA 119 (441)
Q Consensus 49 ~~c~~~---~~~~~l~-~L~~l~l~~n~i---~-~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~ 119 (441)
+.|.+. .+|..++ +++.|+|++|.| | ..+.++++|++|+|++|+|+.+|+. |.++++|++|+|++|+|+
T Consensus 36 ~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~-- 113 (635)
T 4g8a_A 36 YQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-- 113 (635)
T ss_dssp EECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC--
T ss_pred EECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC--
Confidence 568763 4566664 899999999955 3 4688999999999999999988775 999999999999999998
Q ss_pred CCch-hhhcCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-Hhhccc
Q psy2947 120 SIPF-TLTFCKNLTHLYLDNNLLDALP-GFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKK 196 (441)
Q Consensus 120 ~~p~-~~~~l~~L~~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~ 196 (441)
.+|. .|.++++|++|+|++|+|+.+| ..|+++++|++|++++|.+... .+|..+..++.+..+ +.+|.+
T Consensus 114 ~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~--------~~~~~~~~l~~L~~L~L~~N~l 185 (635)
T 4g8a_A 114 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF--------KLPEYFSNLTNLEHLDLSSNKI 185 (635)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC--------CCCGGGGGCTTCCEEECCSSCC
T ss_pred CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccC--------CCchhhccchhhhhhcccCccc
Confidence 6765 5799999999999999999998 5689999999999999997432 245666667666666 777777
Q ss_pred ccC-Cchhhhhhhhc
Q psy2947 197 LHQ-PSRLQDLAVQS 210 (441)
Q Consensus 197 ~~~-p~~l~~l~~l~ 210 (441)
..+ |..+..+..+.
T Consensus 186 ~~~~~~~l~~L~~l~ 200 (635)
T 4g8a_A 186 QSIYCTDLRVLHQMP 200 (635)
T ss_dssp CEECGGGGHHHHTCT
T ss_pred cccccccccchhhhh
Confidence 554 44555555444
No 155
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=99.62 E-value=2.4e-15 Score=131.94 Aligned_cols=125 Identities=16% Similarity=0.176 Sum_probs=112.9
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCC-CCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCC
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTT-KSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSG 386 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d-~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G 386 (441)
.+++|.|+.+|+..++.... .+.+++..+|+.||.+ ++|.|+++||..++..........+.+..+|+.+|.+++|
T Consensus 10 ~~~~g~l~~~el~~~~~~~~---~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G 86 (207)
T 2d8n_A 10 NSKSGALSKEILEELQLNTK---FSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDG 86 (207)
T ss_dssp TCCTTCCCHHHHHHHHHHSS---CCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCS
T ss_pred cccCCCCCHHHHHHHHHHcC---CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCC
Confidence 57889999999999998653 4789999999999999 7999999999999988754435578899999999999999
Q ss_pred cccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 387 TVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 387 ~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.|+++||..++...+...+.++++.+|+.+|.|++|.|+++||..++..
T Consensus 87 ~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~ 135 (207)
T 2d8n_A 87 TLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMA 135 (207)
T ss_dssp EEEHHHHHHHHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred eEeHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHH
Confidence 9999999999999988888899999999999999999999999998864
No 156
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.62 E-value=4.7e-16 Score=135.45 Aligned_cols=148 Identities=13% Similarity=0.127 Sum_probs=115.5
Q ss_pred CCCcccEEeccCCCcC--cccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEc
Q psy2947 59 YFSHAFLLSLSYTPIG--RRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYL 136 (441)
Q Consensus 59 ~l~~L~~l~l~~n~i~--~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l 136 (441)
.+++|+.|++++|.|. +.+..+++|++|++++|.++.++ .+..+++|++|++++|.++ +..|..+..+++|++|++
T Consensus 42 ~l~~L~~L~l~~n~i~~l~~l~~l~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~l~~n~l~-~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 42 QMNSLTYITLANINVTDLTGIEYAHNIKDLTINNIHATNYN-PISGLSNLERLRIMGKDVT-SDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HHHTCCEEEEESSCCSCCTTGGGCTTCSEEEEESCCCSCCG-GGTTCTTCCEEEEECTTCB-GGGSCCCTTCTTCCEEEC
T ss_pred hcCCccEEeccCCCccChHHHhcCCCCCEEEccCCCCCcch-hhhcCCCCCEEEeECCccC-cccChhhcCCCCCCEEEe
Confidence 3678889999888443 15777889999999999777654 6888899999999999987 556778888999999999
Q ss_pred cCCCCCc-cchhhcCCCCCCEEEccCCc-CccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhcccc
Q psy2947 137 DNNLLDA-LPGFLLSMPQLDTVYRHGNH-NYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIA 213 (441)
Q Consensus 137 ~~n~l~~-lp~~~~~l~~L~~L~l~~N~-~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~ 213 (441)
++|+++. .|..+..+++|+.|++++|. +. .+| .+..++.+..+ +.+|.+..++ .+..+++|+.++
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~----------~~~-~l~~l~~L~~L~l~~n~i~~~~-~l~~l~~L~~L~ 187 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAIT----------DIM-PLKTLPELKSLNIQFDGVHDYR-GIEDFPKLNQLY 187 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCC----------CCG-GGGGCSSCCEEECTTBCCCCCT-TGGGCSSCCEEE
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCcc----------ccH-hhcCCCCCCEEECCCCCCcChH-HhccCCCCCEEE
Confidence 9999975 56778889999999999997 42 233 45666666666 7788887777 788999999999
Q ss_pred cccccCC
Q psy2947 214 SKENFFE 220 (441)
Q Consensus 214 l~~n~~~ 220 (441)
+++|++.
T Consensus 188 l~~N~i~ 194 (197)
T 4ezg_A 188 AFSQTIG 194 (197)
T ss_dssp ECBC---
T ss_pred eeCcccC
Confidence 9998764
No 157
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=99.62 E-value=1.1e-15 Score=133.55 Aligned_cols=137 Identities=19% Similarity=0.295 Sum_probs=113.2
Q ss_pred eecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHH----HhCCCcccHHHHHHHHHhhcC----
Q psy2947 259 FTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGGKLSFPDFLKVMHTHSK---- 328 (441)
Q Consensus 259 ~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~----~~~~g~i~~~ef~~~~~~~~~---- 328 (441)
.++..++..+++.|..+|.+ |.| +..|+..+ ..++..+. +..++ .+++|.|+++||..++.....
T Consensus 22 ~ls~~~~~~l~~~F~~~D~d~dG~I-~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~ 96 (202)
T 2bec_A 22 GFSQASLLRLHHRFRALDRNKKGYL-SRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDE 96 (202)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCSSCC-CHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCc-CHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchh
Confidence 56778899999999999975 889 89999998 77766555 34444 368999999999999987754
Q ss_pred ------------CCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHH----hCCCCCCcccHHH
Q psy2947 329 ------------AEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKA----ADTTKSGTVPAKY 392 (441)
Q Consensus 329 ------------~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~----~D~~~~G~is~~e 392 (441)
.....+.++.+|+.+|.|++|.|+.+||..++....+.....+++..+|+. +|.|++|.|+++|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~E 176 (202)
T 2bec_A 97 DTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVE 176 (202)
T ss_dssp HHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHH
T ss_pred cccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHH
Confidence 344567899999999999999999999999998773444556777777777 9999999999999
Q ss_pred HHHHHHHh
Q psy2947 393 LKHVLVNW 400 (441)
Q Consensus 393 f~~~l~~~ 400 (441)
|..++...
T Consensus 177 F~~~~~~~ 184 (202)
T 2bec_A 177 FTKSLEKM 184 (202)
T ss_dssp HHHTTTTS
T ss_pred HHHHHHHh
Confidence 99998754
No 158
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.62 E-value=2.7e-15 Score=137.84 Aligned_cols=180 Identities=18% Similarity=0.179 Sum_probs=119.7
Q ss_pred CCCCcccEEeccCCCc---C-cccCCCCCCCEEEccCCCCCcCCc-CccCCCCCcEEEccCCcCCCCCCch-hhhcCCCC
Q psy2947 58 QYFSHAFLLSLSYTPI---G-RRIFKCDTVEVLSLKSNSLTSLPP-DIGRLTNLRVLCLTDNCLQNASIPF-TLTFCKNL 131 (441)
Q Consensus 58 ~~l~~L~~l~l~~n~i---~-~~~~~l~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~l~~n~l~~~~~p~-~~~~l~~L 131 (441)
..+++|+.|++++|.+ + ..+..+++|++|+|++|.++.++. .|..+++|++|++++|.+. .++. .+..+++|
T Consensus 49 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--~~~~~~~~~l~~L 126 (276)
T 2z62_A 49 FSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA--SLENFPIGHLKTL 126 (276)
T ss_dssp TTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCC--CSTTCCCTTCTTC
T ss_pred ccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCcc--ccCchhcccCCCC
Confidence 3467888888888854 2 356677888888888888886654 4888888888888888887 4443 57788888
Q ss_pred CEEEccCCCCCc--cchhhcCCCCCCEEEccCCcCccCcc--cccc----------------cccccccccccchhHHH-
Q psy2947 132 THLYLDNNLLDA--LPGFLLSMPQLDTVYRHGNHNYFKST--FMWY----------------HSDIHARIRSTSTRDEV- 190 (441)
Q Consensus 132 ~~L~l~~n~l~~--lp~~~~~l~~L~~L~l~~N~~~~~~~--~~~~----------------~~~~p~~l~~l~~~~~~- 190 (441)
++|++++|.++. +|..+..+++|+.|++++|++..... +..+ ...++........+..+
T Consensus 127 ~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~ 206 (276)
T 2z62_A 127 KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELA 206 (276)
T ss_dssp CEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEE
T ss_pred CEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEE
Confidence 888888888865 57778888888888888887644321 1000 01112222222234444
Q ss_pred HhhcccccCCch-hhhhhhhcccccccccCCCCCC-CchhhhHHHhhhcCC
Q psy2947 191 LRKQKKLHQPSR-LQDLAVQSVIASKENFFEPGLF-PGPLVDYIAREYNQY 239 (441)
Q Consensus 191 l~~~~~~~~p~~-l~~l~~l~~l~l~~n~~~~~~~-p~~~~~~l~~~~~~~ 239 (441)
+++|.+..+|.. +..++.|+.+++++|++.+..- -..+..|+.......
T Consensus 207 L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l~~l~~~~~~~~~~~ 257 (276)
T 2z62_A 207 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKE 257 (276)
T ss_dssp CCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGB
T ss_pred CCCCceeecCHhHhcccccccEEEccCCcccccCCchHHHHHHHHhccccc
Confidence 677888777754 4778899999999998886531 234456665544433
No 159
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=3.5e-15 Score=129.31 Aligned_cols=137 Identities=22% Similarity=0.246 Sum_probs=111.6
Q ss_pred cEEeccCC---CcCcccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEccCCC
Q psy2947 64 FLLSLSYT---PIGRRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNL 140 (441)
Q Consensus 64 ~~l~l~~n---~i~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~ 140 (441)
+.+++++| .+|..+. ++|+.|+|++|+|+.+|..|..+++|+.|++++|.|+ +..|..+.++++|++|+|++|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCC-EeCHhHccCCCCCCEEECCCCc
Confidence 56888888 5565543 6899999999999999988999999999999999998 4444568999999999999999
Q ss_pred CCccc-hhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHHHhhcccccCCc-hhhhhhhhccccccccc
Q psy2947 141 LDALP-GFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEVLRKQKKLHQPS-RLQDLAVQSVIASKENF 218 (441)
Q Consensus 141 l~~lp-~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~l~~~~~~~~p~-~l~~l~~l~~l~l~~n~ 218 (441)
|+.+| ..|..+++|+.|+|++|.+.. +|+ .+..++.|+.+++++|+
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~--------------------------------~~~~~~~~l~~L~~L~L~~N~ 137 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISV--------------------------------VPEGAFNDLSALSHLAIGANP 137 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCB--------------------------------CCTTTTTTCTTCCEEECCSSC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCe--------------------------------eChhhhhcCccccEEEeCCCC
Confidence 99887 578999999999999999522 222 35667889999999999
Q ss_pred CCCCCCCchhhhHHHhh
Q psy2947 219 FEPGLFPGPLVDYIARE 235 (441)
Q Consensus 219 ~~~~~~p~~~~~~l~~~ 235 (441)
+.+..-..++..|+...
T Consensus 138 ~~C~c~l~~l~~~~~~~ 154 (193)
T 2wfh_A 138 LYCDCNMQWLSDWVKSE 154 (193)
T ss_dssp EECSGGGHHHHHHHHHS
T ss_pred eecCCcCHHHHHHHHhc
Confidence 98765555666666544
No 160
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=99.62 E-value=3.7e-15 Score=116.65 Aligned_cols=100 Identities=21% Similarity=0.366 Sum_probs=89.0
Q ss_pred CCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh---CCCCCHH
Q psy2947 331 DIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW---GEGLSSK 407 (441)
Q Consensus 331 ~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~---~~~l~~~ 407 (441)
.+.+++..+|+.+| ++|.|+++||..++.. .....+.++.+|+.+|++++|+|+.+||+.++..+ |.+++++
T Consensus 7 ~t~~e~~~~~~~~d--~~g~i~~~ef~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~ 81 (110)
T 1pva_A 7 LKADDIKKALDAVK--AEGSFNHKKFFALVGL---KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDA 81 (110)
T ss_dssp SCHHHHHHHHHHTC--STTCCCHHHHHHHHTC---TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHH
T ss_pred CCHHHHHHHHHhcC--CCCcCcHHHHHHHHcc---CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCCHH
Confidence 45678888888888 8899999999998843 23446789999999999999999999999999998 7889999
Q ss_pred HHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 408 EVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 408 ~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+++.+++.+|.|++|.|+|+||+.++.+
T Consensus 82 ~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 82 ETKAFLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 9999999999999999999999998864
No 161
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.62 E-value=1.1e-15 Score=140.59 Aligned_cols=164 Identities=18% Similarity=0.169 Sum_probs=129.5
Q ss_pred CccCCCC---CCCCC-CcccEEeccCCCc---C-cccCCCCCCCEEEccCCCCCcCCc-CccCCCCCcEEEccCCcCCCC
Q psy2947 49 GICSHIW---IPQYF-SHAFLLSLSYTPI---G-RRIFKCDTVEVLSLKSNSLTSLPP-DIGRLTNLRVLCLTDNCLQNA 119 (441)
Q Consensus 49 ~~c~~~~---~~~~l-~~L~~l~l~~n~i---~-~~~~~l~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~l~~n~l~~~ 119 (441)
+.|.+.+ +|..+ ++|+.|++++|.+ + ..+..+++|++|++++|+++.++. .|..+++|++|++++|.++ +
T Consensus 12 ~~c~~~~l~~ip~~l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~ 90 (276)
T 2z62_A 12 YQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-S 90 (276)
T ss_dssp EECTTSCCSSCCSSSCTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-E
T ss_pred EEecCCCccccCCCCCCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccC-c
Confidence 4455432 34433 4799999999955 3 367889999999999999998776 5999999999999999998 4
Q ss_pred CCchhhhcCCCCCEEEccCCCCCccch-hhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-Hhhcccc
Q psy2947 120 SIPFTLTFCKNLTHLYLDNNLLDALPG-FLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKL 197 (441)
Q Consensus 120 ~~p~~~~~l~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~ 197 (441)
..|..+..+++|++|++++|++..++. .+..+++|++|++++|.+... .+|..+..++.+..+ +.+|.+.
T Consensus 91 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--------~l~~~~~~l~~L~~L~Ls~N~l~ 162 (276)
T 2z62_A 91 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF--------KLPEYFSNLTNLEHLDLSSNKIQ 162 (276)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC--------CCCGGGGGCTTCCEEECCSSCCC
T ss_pred cChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCcccee--------cCchhhccCCCCCEEECCCCCCC
Confidence 444678999999999999999988874 788999999999999996331 256777777777777 8888887
Q ss_pred cCC-chhhhhhhhc----ccccccccCCC
Q psy2947 198 HQP-SRLQDLAVQS----VIASKENFFEP 221 (441)
Q Consensus 198 ~~p-~~l~~l~~l~----~l~l~~n~~~~ 221 (441)
.+| ..+..+..++ .+++++|.+..
T Consensus 163 ~~~~~~~~~l~~L~~l~l~L~ls~n~l~~ 191 (276)
T 2z62_A 163 SIYCTDLRVLHQMPLLNLSLDLSLNPMNF 191 (276)
T ss_dssp EECGGGGHHHHTCTTCCEEEECCSSCCCE
T ss_pred cCCHHHhhhhhhccccceeeecCCCcccc
Confidence 665 4667777666 67788886653
No 162
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=99.62 E-value=1.2e-15 Score=131.92 Aligned_cols=135 Identities=19% Similarity=0.247 Sum_probs=114.0
Q ss_pred cccchHHHHHhhhccccC--CCccCHHHHHHHHHHc-----------CCCcCHHHHHHHHH----hCCCcccHHHHHHHH
Q psy2947 261 FKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSL-----------GMSPTIAELKKYLA----EKGGKLSFPDFLKVM 323 (441)
Q Consensus 261 ~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~-----------~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~ 323 (441)
++.+...+++.|..+|.+ |.| +.+|+..++..+ +..++..++..++. +++|.|+++||..++
T Consensus 35 ~~~~~~~l~~~F~~~D~d~~G~i-~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~ 113 (191)
T 3khe_A 35 TLEETKELTQIFRQLDNNGDGQL-DRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVC 113 (191)
T ss_dssp CTTTTHHHHHHHHHHCTTCSSEE-CHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCCC-cHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence 577889999999999976 888 899999999877 44555666666664 688999999999988
Q ss_pred HhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 324 HTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 324 ~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
.... .....+.+..+|+.+|.|++|.|+.+||..++. ......+++..+|+.+|.|++|.|+++||.+++..+
T Consensus 114 ~~~~-~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~---~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 186 (191)
T 3khe_A 114 MDKQ-LLLSRERLLAAFQQFDSDGSGKITNEELGRLFG---VTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKI 186 (191)
T ss_dssp SCHH-HHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT---SSCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHhc-ccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc---cCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 6431 234568899999999999999999999999988 345567889999999999999999999999999874
No 163
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.62 E-value=1.8e-15 Score=138.80 Aligned_cols=152 Identities=22% Similarity=0.187 Sum_probs=126.3
Q ss_pred CCCcccEEeccCCCcC--cccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEc
Q psy2947 59 YFSHAFLLSLSYTPIG--RRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYL 136 (441)
Q Consensus 59 ~l~~L~~l~l~~n~i~--~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l 136 (441)
.+++|+.|++++|.+. ..+..+++|++|++++|.++.++ .+..+++|++|++++|.++ +..|..+..+++|++|++
T Consensus 39 ~l~~L~~L~l~~~~i~~~~~l~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L 116 (272)
T 3rfs_A 39 ELNSIDQIIANNSDIKSVQGIQYLPNVRYLALGGNKLHDIS-ALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVL 116 (272)
T ss_dssp HHTTCCEEECTTSCCCCCTTGGGCTTCCEEECTTSCCCCCG-GGTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEEC
T ss_pred cccceeeeeeCCCCcccccccccCCCCcEEECCCCCCCCch-hhcCCCCCCEEECCCCccC-ccChhHhcCCcCCCEEEC
Confidence 3688999999999553 45778999999999999999864 7899999999999999998 444445799999999999
Q ss_pred cCCCCCccc-hhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCch-hhhhhhhcccc
Q psy2947 137 DNNLLDALP-GFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSR-LQDLAVQSVIA 213 (441)
Q Consensus 137 ~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~-l~~l~~l~~l~ 213 (441)
++|+++.+| ..+..+++|++|++++|.+... .+..+..++.+..+ +.+|.+..+|+. +..++.|+.|+
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~---------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 187 (272)
T 3rfs_A 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQSL---------PKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLR 187 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCC---------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcCCccCHHHhccCCCCCEEECCCCccCcc---------CHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEE
Confidence 999999887 4578999999999999986432 23445667777777 888888887754 58899999999
Q ss_pred cccccCCC
Q psy2947 214 SKENFFEP 221 (441)
Q Consensus 214 l~~n~~~~ 221 (441)
+++|.+..
T Consensus 188 L~~N~l~~ 195 (272)
T 3rfs_A 188 LYQNQLKS 195 (272)
T ss_dssp CCSSCCSC
T ss_pred CCCCcCCc
Confidence 99998764
No 164
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=99.61 E-value=5.7e-15 Score=142.06 Aligned_cols=138 Identities=32% Similarity=0.512 Sum_probs=119.5
Q ss_pred eecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCCC
Q psy2947 259 FTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDI 332 (441)
Q Consensus 259 ~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~~ 332 (441)
.++..++.+++++|..+|.+ |.| +.+|++.+++.++..++..++..++. +++|.|+++||..++.........
T Consensus 305 ~ls~eei~el~~~F~~fD~D~dG~I-s~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~ 383 (450)
T 3sg6_A 305 QLTEEQIAEFKEAFSLFDKDGDGTI-TTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 383 (450)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEE-CHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------C
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCcC-cHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccch
Confidence 45667889999999999975 889 89999999999999999999988885 678999999999999876666667
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
.+.++.+|+.+|.|++|.|+.+||+.++... ......++++.+|+.+|.|++|.|+++||..+|.
T Consensus 384 ~e~l~~aFk~fD~D~dG~Is~eELr~~L~~l-G~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~ 448 (450)
T 3sg6_A 384 EEEIREAFRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 448 (450)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHH-TCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC
T ss_pred hhHHHHHHHHhCCCCCCeEeHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 8899999999999999999999999999887 4456678999999999999999999999999884
No 165
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=99.61 E-value=2.6e-15 Score=117.15 Aligned_cols=100 Identities=16% Similarity=0.268 Sum_probs=88.7
Q ss_pred CCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh---CCCCCH
Q psy2947 330 EDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW---GEGLSS 406 (441)
Q Consensus 330 ~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~---~~~l~~ 406 (441)
..+.+++..+|+.+| ++|.|+++||..++... ....+.++.+|+.+|.+++|.|+.+||+.+++.+ |..+++
T Consensus 5 ~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~ 79 (108)
T 1rro_A 5 ILSAEDIAAALQECQ--DPDTFEPQKFFQTSGLS---KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTE 79 (108)
T ss_dssp TSCHHHHHHHHHHTC--STTCCCHHHHHHHHSGG---GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCH
T ss_pred cCCHHHHHHHHHHcc--CCCCcCHHHHHHHHhcC---cccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCCH
Confidence 356778888888898 88999999999988532 2346789999999999999999999999999998 678999
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 407 KEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 407 ~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
++++.+++.+|.|++|.|+|+||+.++.
T Consensus 80 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 80 SETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp HHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 9999999999999999999999999875
No 166
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=99.61 E-value=7.1e-15 Score=130.59 Aligned_cols=138 Identities=14% Similarity=0.172 Sum_probs=113.0
Q ss_pred ecccchHHHHHhhhccccCCCccCHHHHHHHHHHcCCC-cCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCCCHH
Q psy2947 260 TFKTPYLEFRECFFLFARNGTIKTLDELSVIMRSLGMS-PTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIPK 334 (441)
Q Consensus 260 l~~~~~~~l~~~f~~~d~~G~i~~~~el~~~~~~~~~~-~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~~~~ 334 (441)
++..++..+.+.|...|.+|.| +.+++..+++.++.. .+..++..++. +++|.|+++||..++..... ....+
T Consensus 48 ~s~~ei~~l~~~Fd~~d~~G~I-~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~-~~~~~ 125 (224)
T 1s1e_A 48 FTKRELQVLYRGFKNECPSGVV-NEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLR-GTVHE 125 (224)
T ss_dssp CCHHHHHHHHHHHHHHCTTSCB-CHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHH-CCHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCCC-CHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHcc-CCHHH
Confidence 4567777777777766678999 899999999988754 66777766664 78999999999999886642 34567
Q ss_pred HHHHHHHhhcCCCCCcccHHHHHHHHHhh----c-------cCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 335 EVVDAFKAADTTKSGKLSFPDFLKVMHTH----S-------KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 335 ~~~~~f~~~D~d~~g~i~~~ef~~~~~~~----~-------~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
.++.+|+.+|.|++|.|+++||..++... . ......+.+..+|+.+|.|++|.|+++||..++..
T Consensus 126 ~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~ 201 (224)
T 1s1e_A 126 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQE 201 (224)
T ss_dssp HHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 89999999999999999999999988764 1 11222478999999999999999999999999975
No 167
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.61 E-value=3.6e-15 Score=132.16 Aligned_cols=116 Identities=21% Similarity=0.226 Sum_probs=103.7
Q ss_pred CCCCCcccEEeccCCCc----CcccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCchhhhcCCCC
Q psy2947 57 PQYFSHAFLLSLSYTPI----GRRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPFTLTFCKNL 131 (441)
Q Consensus 57 ~~~l~~L~~l~l~~n~i----~~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L 131 (441)
+..+++|+.|+|++|.| |..+..+++|++|+|++|+|+.+|.. |..+++|+.|++++|+++ +..|..+..+++|
T Consensus 52 ~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L 130 (220)
T 2v9t_B 52 FSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNL 130 (220)
T ss_dssp STTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTC
T ss_pred hhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCC-EeCHHHcCCCCCC
Confidence 44588999999999955 56788999999999999999999987 789999999999999998 5556788999999
Q ss_pred CEEEccCCCCCccc-hhhcCCCCCCEEEccCCcCccCcccccc
Q psy2947 132 THLYLDNNLLDALP-GFLLSMPQLDTVYRHGNHNYFKSTFMWY 173 (441)
Q Consensus 132 ~~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~~~~~~~~~ 173 (441)
++|+|++|+|+.+| ..+..+++|+.|+|++|++.|.|.+.|+
T Consensus 131 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l~~l 173 (220)
T 2v9t_B 131 NLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWL 173 (220)
T ss_dssp CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGGHHH
T ss_pred CEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCccHHH
Confidence 99999999999887 5688899999999999999998877654
No 168
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.60 E-value=1.4e-15 Score=152.71 Aligned_cols=176 Identities=15% Similarity=0.174 Sum_probs=97.1
Q ss_pred CCCcccEEeccCCC----cCcccCCCCCCCEEEccCCCCCc---CCcCccCCCCCcEEEccCCcCCCCCCchh-hhcCCC
Q psy2947 59 YFSHAFLLSLSYTP----IGRRIFKCDTVEVLSLKSNSLTS---LPPDIGRLTNLRVLCLTDNCLQNASIPFT-LTFCKN 130 (441)
Q Consensus 59 ~l~~L~~l~l~~n~----i~~~~~~l~~L~~L~l~~n~l~~---lp~~~~~l~~L~~L~l~~n~l~~~~~p~~-~~~l~~ 130 (441)
.+++|+.|++++|. +|..+..+++|++|++++|+++. +|..+..+++|+.|++++|.++ +.+|.. +..+++
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~-~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVS-YDEKKGDCSWTKS 400 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCB-CCGGGCSCCCCTT
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCC-cccccchhccCcc
Confidence 34555555555552 23344455555555555555552 2233555555555555555554 224443 344555
Q ss_pred CCEEEccCCCCC-ccchhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCch-hhhhh
Q psy2947 131 LTHLYLDNNLLD-ALPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSR-LQDLA 207 (441)
Q Consensus 131 L~~L~l~~n~l~-~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~-l~~l~ 207 (441)
|++|++++|+++ .+|..+. ++|+.|++++|++ ..+|..+..++.+..+ +++|.+..+|.. +..++
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l----------~~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~ 468 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKI----------KSIPKQVVKLEALQELNVASNQLKSVPDGIFDRLT 468 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCC----------CCCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCEEECcCCCCCcchhhhhc--ccCCEEECCCCcc----------cccchhhhcCCCCCEEECCCCcCCccCHHHhccCC
Confidence 555555555552 3333222 4555555555553 2456666677777777 888888888876 77888
Q ss_pred hhcccccccccCCCCCCCchh-hhHHHhhhcCCcccccccC
Q psy2947 208 VQSVIASKENFFEPGLFPGPL-VDYIAREYNQYHVCHYCNS 247 (441)
Q Consensus 208 ~l~~l~l~~n~~~~~~~p~~~-~~~l~~~~~~~~~~~~~~~ 247 (441)
.|+.+++++|++.+.+--.++ ..|+............|..
T Consensus 469 ~L~~L~l~~N~~~c~c~~~~~~~~~~~~~~~~~~~~~~C~~ 509 (520)
T 2z7x_B 469 SLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSAKCSG 509 (520)
T ss_dssp TCCEEECCSSCBCCCHHHHHHHHHHHHHTTTTEESCCBBTT
T ss_pred cccEEECcCCCCcccCCchHHHHHHHHhccccCCCCCCcCC
Confidence 888888888888764332344 5555554433333333443
No 169
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=99.60 E-value=8.6e-15 Score=151.21 Aligned_cols=122 Identities=14% Similarity=0.183 Sum_probs=111.5
Q ss_pred HHHHHhCCCcccHHHHHHHHHhhc-------CCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHH
Q psy2947 304 KKYLAEKGGKLSFPDFLKVMHTHS-------KAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDA 376 (441)
Q Consensus 304 ~~~~~~~~g~i~~~ef~~~~~~~~-------~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~ 376 (441)
..++ +++|.|+.+||..++.... ....+.+.++.+|+.+|.|++|.|+++||..++... +.++.+
T Consensus 539 ~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~~-------~~l~~~ 610 (714)
T 3bow_A 539 AQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI-------QKYQKI 610 (714)
T ss_dssp HHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHHH-------HHHHHH
T ss_pred HHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH-------HHHHHH
Confidence 3445 8899999999999999862 345778999999999999999999999999998765 678999
Q ss_pred HHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 377 FKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 377 f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
|+.+|+|++|.|+.+||+.+++.+|..+++++++.+++.+| |+||.|+|+||+.+|.
T Consensus 611 F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~ 667 (714)
T 3bow_A 611 YREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLV 667 (714)
T ss_dssp HHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CTTCEECHHHHHHHHH
T ss_pred HHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 9999999999999885
No 170
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.60 E-value=5.7e-16 Score=144.67 Aligned_cols=154 Identities=16% Similarity=0.167 Sum_probs=107.9
Q ss_pred CCCCCcccEEeccCCCcC------cccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCc--hhhhcC
Q psy2947 57 PQYFSHAFLLSLSYTPIG------RRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIP--FTLTFC 128 (441)
Q Consensus 57 ~~~l~~L~~l~l~~n~i~------~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p--~~~~~l 128 (441)
+..+++|+.|++++|.+. ..+..+++|++|+|++|.++.+|..+..+++|++|++++|.++ .++ ..+..+
T Consensus 48 ~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~--~~~~~~~~~~l 125 (306)
T 2z66_A 48 FDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLK--QMSEFSVFLSL 125 (306)
T ss_dssp TTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEE--SSTTTTTTTTC
T ss_pred hhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccccChhhcCCCCCCCEEECCCCccc--ccccchhhhhc
Confidence 345778888888888553 4455677888888888888877777778888888888888877 444 356777
Q ss_pred CCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccC-Cchhhh
Q psy2947 129 KNLTHLYLDNNLLDAL-PGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQ-PSRLQD 205 (441)
Q Consensus 129 ~~L~~L~l~~n~l~~l-p~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~-p~~l~~ 205 (441)
++|++|++++|.++.+ |..+..+++|+.|++++|.+.. ..+|..+..++.+..+ +++|.+..+ |..+..
T Consensus 126 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 197 (306)
T 2z66_A 126 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE--------NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS 197 (306)
T ss_dssp TTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGG--------GEECSCCTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred cCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccc--------ccchhHHhhCcCCCEEECCCCCcCCcCHHHhcC
Confidence 8888888888887544 4667777888888888887421 1245556666666666 666766555 456677
Q ss_pred hhhhcccccccccCC
Q psy2947 206 LAVQSVIASKENFFE 220 (441)
Q Consensus 206 l~~l~~l~l~~n~~~ 220 (441)
++.|+.|++++|.+.
T Consensus 198 l~~L~~L~L~~N~l~ 212 (306)
T 2z66_A 198 LSSLQVLNMSHNNFF 212 (306)
T ss_dssp CTTCCEEECTTSCCS
T ss_pred CCCCCEEECCCCccC
Confidence 777777777777654
No 171
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.60 E-value=1.5e-15 Score=153.56 Aligned_cols=124 Identities=22% Similarity=0.225 Sum_probs=98.8
Q ss_pred cCCCCCccCCCCccCCCCCCCC-CCcccEEeccCCCc----CcccCCCCCCCEEEccCCCCCcCC-cCccCCCCCcEEEc
Q psy2947 38 ACQRNCSLEVGGICSHIWIPQY-FSHAFLLSLSYTPI----GRRIFKCDTVEVLSLKSNSLTSLP-PDIGRLTNLRVLCL 111 (441)
Q Consensus 38 ~C~~~c~~~~~~~c~~~~~~~~-l~~L~~l~l~~n~i----~~~~~~l~~L~~L~l~~n~l~~lp-~~~~~l~~L~~L~l 111 (441)
+|||.|.|... ...-..+|.. .++|+.|++++|.+ |..+..+++|++|+|++|+++.++ ..|..+++|++|++
T Consensus 3 ~C~~~~~c~~~-~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGVCDGR-SRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSEEECT-TSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCceEECC-CCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 58888877321 0111123322 36899999999954 456889999999999999999766 45999999999999
Q ss_pred cCCcCCCCCCchhhhcCCCCCEEEccCCCCCc--cchhhcCCCCCCEEEccCCc
Q psy2947 112 TDNCLQNASIPFTLTFCKNLTHLYLDNNLLDA--LPGFLLSMPQLDTVYRHGNH 163 (441)
Q Consensus 112 ~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~--lp~~~~~l~~L~~L~l~~N~ 163 (441)
++|.++ +..|..++.+++|++|++++|.++. +|..++.+++|++|++++|.
T Consensus 82 s~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 134 (549)
T 2z81_A 82 SDNHLS-SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVE 134 (549)
T ss_dssp TTSCCC-SCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS
T ss_pred CCCccC-ccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCc
Confidence 999998 4444458999999999999999985 46788999999999999998
No 172
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.60 E-value=6e-15 Score=124.91 Aligned_cols=128 Identities=20% Similarity=0.141 Sum_probs=106.0
Q ss_pred CCcccEEeccCCC-----cCcccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEE
Q psy2947 60 FSHAFLLSLSYTP-----IGRRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHL 134 (441)
Q Consensus 60 l~~L~~l~l~~n~-----i~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 134 (441)
.++|+.|++++|. +|..+..+++|++|++++|.++.+ ..+..+++|++|++++|.++ +.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIF-GGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCC-SCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCc-hHHHHHHhhCCCCCEE
Confidence 4789999999984 455567789999999999999987 77999999999999999998 4578777889999999
Q ss_pred EccCCCCCccc--hhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHHHhhcccccCCc----hhhhhhh
Q psy2947 135 YLDNNLLDALP--GFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEVLRKQKKLHQPS----RLQDLAV 208 (441)
Q Consensus 135 ~l~~n~l~~lp--~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~l~~~~~~~~p~----~l~~l~~ 208 (441)
++++|.|+.+| ..+..+++|+.|++++|++.. +|. .+..++.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~--------------------------------~~~~~~~~~~~l~~ 148 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTN--------------------------------LNDYRESVFKLLPQ 148 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGT--------------------------------STTHHHHHHTTCSS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcc--------------------------------hHHHHHHHHHhCcc
Confidence 99999999887 788999999999999998522 222 4566777
Q ss_pred hcccccccccCCC
Q psy2947 209 QSVIASKENFFEP 221 (441)
Q Consensus 209 l~~l~l~~n~~~~ 221 (441)
|+.++++.|....
T Consensus 149 L~~L~l~~n~~~~ 161 (168)
T 2ell_A 149 LTYLDGYDREDQE 161 (168)
T ss_dssp CCEETTEETTSCB
T ss_pred CcEecCCCCChhh
Confidence 8888888776543
No 173
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=99.60 E-value=8.5e-15 Score=128.46 Aligned_cols=161 Identities=15% Similarity=0.170 Sum_probs=116.2
Q ss_pred eecccchHHHHHhhhccccC----CCccCHHHHHHHHHHcCCCcCHHHH----HHHHHhCCCcccHHHHHHHHHhhcCCC
Q psy2947 259 FTFKTPYLEFRECFFLFARN----GTIKTLDELSVIMRSLGMSPTIAEL----KKYLAEKGGKLSFPDFLKVMHTHSKAE 330 (441)
Q Consensus 259 ~l~~~~~~~l~~~f~~~d~~----G~i~~~~el~~~~~~~~~~~~~~~~----~~~~~~~~g~i~~~ef~~~~~~~~~~~ 330 (441)
.++..++..+.+.|..+|.+ |.| +.+|+..++.. ........+ ..++.+++|.|+++||..++.......
T Consensus 30 ~~s~~~~~~l~~~F~~~D~d~~~~G~i-~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~ 107 (207)
T 2ehb_A 30 PFTVEEVEALYELFKKLSSSIIDDGLI-HKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSA 107 (207)
T ss_dssp SCCHHHHHHHHHHHHHHTTSSSCSSCE-EHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTS
T ss_pred CCCHHHHHHHHHHHHHhccccCCCCcc-CHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCC
Confidence 35677889999999999954 888 89999999876 222222233 333357899999999999998775555
Q ss_pred CCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhh---ccCCCChHH----HHHHHHHhCCCCCCcccHHHHHHHHHHhCCC
Q psy2947 331 DIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTH---SKAEDIPKE----VVDAFKAADTTKSGTVPAKYLKHVLVNWGEG 403 (441)
Q Consensus 331 ~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~---~~~~~~~~~----~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~ 403 (441)
...+.++.+|+.+|.|++|.|+.+||..++... .+.....++ ++.+|+.+|.|++|.|+++||.+++....
T Consensus 108 ~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~-- 185 (207)
T 2ehb_A 108 PVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNP-- 185 (207)
T ss_dssp CHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCG--
T ss_pred CHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCh--
Confidence 567889999999999999999999999988632 123333443 46678899999999999999999998632
Q ss_pred CCHHHHHHHHHHh--CCCCCCceeHHHHH
Q psy2947 404 LSSKEVDQIFREA--NVTMNSKVRYEDFV 430 (441)
Q Consensus 404 l~~~~~~~l~~~~--d~d~dg~i~~~ef~ 430 (441)
.+++.+ ..-++..++|.+|+
T Consensus 186 -------~~~~~~~~~~~~~~~~~f~~~~ 207 (207)
T 2ehb_A 186 -------SLIKNMTLPYLKDINRTFPSFV 207 (207)
T ss_dssp -------GGGGGGCCTTTTSTTTC-----
T ss_pred -------HHHHHhcchhhhhhhhcCcCcC
Confidence 111112 12457788888875
No 174
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.60 E-value=2.6e-15 Score=140.23 Aligned_cols=143 Identities=20% Similarity=0.203 Sum_probs=75.8
Q ss_pred CCcccEEeccCCCc---CcccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEc
Q psy2947 60 FSHAFLLSLSYTPI---GRRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYL 136 (441)
Q Consensus 60 l~~L~~l~l~~n~i---~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l 136 (441)
+++|+.|++++|.+ +. +..+++|++|+|++|.++.+| .+..+++|+.|++++|.++ .+|. +..+++|++|++
T Consensus 62 l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~~-~~~~l~~L~~L~l~~n~l~--~~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 62 LNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNVS-AIAGLQSIKTLDLTSTQIT--DVTP-LAGLSNLQVLYL 136 (308)
T ss_dssp CTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCCG-GGTTCTTCCEEECTTSCCC--CCGG-GTTCTTCCEEEC
T ss_pred cCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCch-hhcCCCCCCEEECCCCCCC--Cchh-hcCCCCCCEEEC
Confidence 55566666666632 23 555566666666666666553 4555666666666666665 3443 555666666666
Q ss_pred cCCCCCccchhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhcccccc
Q psy2947 137 DNNLLDALPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIASK 215 (441)
Q Consensus 137 ~~n~l~~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~l~ 215 (441)
++|+++.++. +..+++|+.|++++|.+.... . +..++.+..+ +.+|.+..+|+ +..++.|+.|+++
T Consensus 137 ~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~----------~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~ 203 (308)
T 1h6u_A 137 DLNQITNISP-LAGLTNLQYLSIGNAQVSDLT----------P-LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLK 203 (308)
T ss_dssp CSSCCCCCGG-GGGCTTCCEEECCSSCCCCCG----------G-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECT
T ss_pred CCCccCcCcc-ccCCCCccEEEccCCcCCCCh----------h-hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEcc
Confidence 6666655544 555566666666666542211 1 3333333333 44444444443 4555555555555
Q ss_pred cccCC
Q psy2947 216 ENFFE 220 (441)
Q Consensus 216 ~n~~~ 220 (441)
+|.+.
T Consensus 204 ~N~l~ 208 (308)
T 1h6u_A 204 NNQIS 208 (308)
T ss_dssp TSCCC
T ss_pred CCccC
Confidence 55443
No 175
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.60 E-value=2.9e-15 Score=153.02 Aligned_cols=105 Identities=26% Similarity=0.299 Sum_probs=83.6
Q ss_pred CCCcccEEeccCCCc----CcccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCchh-hhcCCCCC
Q psy2947 59 YFSHAFLLSLSYTPI----GRRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPFT-LTFCKNLT 132 (441)
Q Consensus 59 ~l~~L~~l~l~~n~i----~~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~~-~~~l~~L~ 132 (441)
.+++|+.|+|++|.| |..+..+++|++|+|++|.++.+|+. |+.+++|++|++++|.++ .+|.. ++.+++|+
T Consensus 73 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--~l~~~~~~~l~~L~ 150 (597)
T 3oja_B 73 SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS--SLPRGIFHNTPKLT 150 (597)
T ss_dssp HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC--CCCTTTTTTCTTCC
T ss_pred cCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCC--CCCHHHhccCCCCC
Confidence 467889999988854 24677888888888888888877665 788888888888888887 66665 47888888
Q ss_pred EEEccCCCCCccc-hhhcCCCCCCEEEccCCcCc
Q psy2947 133 HLYLDNNLLDALP-GFLLSMPQLDTVYRHGNHNY 165 (441)
Q Consensus 133 ~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~ 165 (441)
+|+|++|.|+.++ ..|+.+++|+.|++++|.+.
T Consensus 151 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 151 TLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp EEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCS
T ss_pred EEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCC
Confidence 8888888887665 56788888888888888764
No 176
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.59 E-value=4.5e-15 Score=131.52 Aligned_cols=116 Identities=18% Similarity=0.191 Sum_probs=103.4
Q ss_pred CCCCCcccEEeccCCCc---C-cccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCchhhhcCCCC
Q psy2947 57 PQYFSHAFLLSLSYTPI---G-RRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPFTLTFCKNL 131 (441)
Q Consensus 57 ~~~l~~L~~l~l~~n~i---~-~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L 131 (441)
+..+++|+.|+|++|.| + ..+..+++|++|+|++|+++.+|+. |..+++|++|++++|+++ +..|..+..+++|
T Consensus 53 ~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L 131 (220)
T 2v70_A 53 FKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSV 131 (220)
T ss_dssp GGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCC-CBCTTSSTTCTTC
T ss_pred hccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCC-eECHhHcCCCccC
Confidence 34589999999999955 3 4688899999999999999988876 999999999999999998 5557788999999
Q ss_pred CEEEccCCCCCcc-chhhcCCCCCCEEEccCCcCccCcccccc
Q psy2947 132 THLYLDNNLLDAL-PGFLLSMPQLDTVYRHGNHNYFKSTFMWY 173 (441)
Q Consensus 132 ~~L~l~~n~l~~l-p~~~~~l~~L~~L~l~~N~~~~~~~~~~~ 173 (441)
++|+|++|+|+.+ |..|..+++|+.|++++|++.+.|.+.|+
T Consensus 132 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~l 174 (220)
T 2v70_A 132 RLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWL 174 (220)
T ss_dssp SEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGGHHH
T ss_pred CEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCchHHH
Confidence 9999999999888 68899999999999999999998876654
No 177
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=99.59 E-value=8.2e-15 Score=134.17 Aligned_cols=140 Identities=15% Similarity=0.256 Sum_probs=113.3
Q ss_pred CHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHH----hhcCC-CCCHHHHHH----HHHhhcCCCCCcccH
Q psy2947 283 TLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH----THSKA-EDIPKEVVD----AFKAADTTKSGKLSF 353 (441)
Q Consensus 283 ~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~----~~~~~-~~~~~~~~~----~f~~~D~d~~g~i~~ 353 (441)
+..+++.++..++ .+++|.|+.+||..++. ..... ..+..++.. +|+.+|.|++|.|++
T Consensus 9 ~~~~l~~~F~~~D------------~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~ 76 (272)
T 2be4_A 9 DAAGFLQIWQHFD------------ADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQI 76 (272)
T ss_dssp CHHHHHHHHHHHC------------TTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEH
T ss_pred CHHHHHHHHHHhc------------CCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeH
Confidence 4566666666655 68999999999999998 44331 445555544 568999999999999
Q ss_pred HHHHHHH-----------HhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh----CCCCCHHHHHH----HHH
Q psy2947 354 PDFLKVM-----------HTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW----GEGLSSKEVDQ----IFR 414 (441)
Q Consensus 354 ~ef~~~~-----------~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~----~~~l~~~~~~~----l~~ 414 (441)
+||..++ ... ......+.++.+|+.+|.+++|.|+.+||+.++..+ |..++++++.. +++
T Consensus 77 ~Ef~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~ 155 (272)
T 2be4_A 77 EELANMILPQEENFLLIFRRE-APLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMK 155 (272)
T ss_dssp HHHHHHHSCHHHHHHHHHHHH-SCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHhhc-cCcccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 9999983 222 234456789999999999999999999999999987 88899888754 999
Q ss_pred HhCCCCCCceeHHHHHHHHhc
Q psy2947 415 EANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 415 ~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.+|.|++|.|+|+||+.++..
T Consensus 156 ~~D~~~dg~i~~~ef~~~~~~ 176 (272)
T 2be4_A 156 IFDKNKDGRLDLNDLARILAL 176 (272)
T ss_dssp HHCSSCSSEEEHHHHGGGSCC
T ss_pred HhccCCCCcCcHHHHHHHHhh
Confidence 999999999999999988753
No 178
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=99.59 E-value=8.3e-15 Score=126.60 Aligned_cols=124 Identities=19% Similarity=0.199 Sum_probs=109.7
Q ss_pred hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCC-CCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCc
Q psy2947 309 EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTT-KSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGT 387 (441)
Q Consensus 309 ~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d-~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~ 387 (441)
+..|.++.+++..+.... ..+..+++.+|+.+|.+ ++|.|+++||..++..........+.++.+|+.+|.+++|.
T Consensus 3 ~~~~~l~~~el~~~~~~~---~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~ 79 (190)
T 2l2e_A 3 KSQSKLSQDQLQDLVRST---RFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGY 79 (190)
T ss_dssp CSSCCSCHHHHHHHHHHH---CSCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTC
T ss_pred cccccCCHHHHHHHHHhc---CCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCe
Confidence 356789999998888764 24678999999999999 89999999999999887444445678999999999999999
Q ss_pred ccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 388 VPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 388 is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
|+++||..++...+...+.+++..+|+.+|.|++|.|+++||..++..
T Consensus 80 i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~ 127 (190)
T 2l2e_A 80 IDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127 (190)
T ss_dssp EEHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHH
T ss_pred EeHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHH
Confidence 999999999998888888999999999999999999999999998864
No 179
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=99.59 E-value=8.8e-15 Score=125.38 Aligned_cols=130 Identities=15% Similarity=0.306 Sum_probs=108.0
Q ss_pred ccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCCCHHH
Q psy2947 262 KTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIPKE 335 (441)
Q Consensus 262 ~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~~~~~ 335 (441)
+.++..++++|..+|.+ |.| +.+|+..+++.++.. ..++..++. +++|.|+++||..++..... ...+.
T Consensus 35 ~~~~~~l~~~F~~~D~d~~G~i-~~~El~~~l~~~g~~--~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~--~~~~~ 109 (180)
T 3mse_B 35 NNHIKYINELFYKLDTNHNGSL-SHREIYTVLASVGIK--KWDINRILQALDINDRGNITYTEFMAGCYRWKN--IESTF 109 (180)
T ss_dssp HHHHHHHHHHHHHHCTTCSSSE-EHHHHHHHHHHTTCC--HHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTT--C--CH
T ss_pred HHHHHHHHHHHHHhCCCCCCcC-CHHHHHHHHHHcCCC--HHHHHHHHHHhCCCCCCcCcHHHHHHHHHhccc--CCHHH
Confidence 67889999999999986 889 899999999998865 456666554 68999999999998875433 23478
Q ss_pred HHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCC--------CcccHHHHHHHHHH
Q psy2947 336 VVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKS--------GTVPAKYLKHVLVN 399 (441)
Q Consensus 336 ~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~--------G~is~~ef~~~l~~ 399 (441)
+..+|+.+|.|++|.|+.+||..++.. .....+++..+|+.+|.+++ |.|+++||..+|..
T Consensus 110 ~~~~F~~~D~d~~G~I~~~El~~~l~~---~~~~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~ 178 (180)
T 3mse_B 110 LKAAFNKIDKDEDGYISKSDIVSLVHD---KVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLS 178 (180)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHTTT---SSCCHHHHHHHHHHHHTC---------CCCBCHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHcC---CCCCHHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHHh
Confidence 999999999999999999999999883 34557889999999999988 99999999999864
No 180
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=99.58 E-value=9.6e-16 Score=163.15 Aligned_cols=162 Identities=16% Similarity=0.249 Sum_probs=115.1
Q ss_pred hHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHH---hCCCcccHHHHHHHHHhhc------------
Q psy2947 265 YLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLA---EKGGKLSFPDFLKVMHTHS------------ 327 (441)
Q Consensus 265 ~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~---~~~g~i~~~ef~~~~~~~~------------ 327 (441)
...++.+|..+|.+ |.| +.+|++.+++.++...+..++..++. +++|.|+++||..++....
T Consensus 606 ~~~l~~~F~~~D~d~~G~I-s~~El~~~l~~~g~~l~~~~~~~l~~~~dd~dg~I~~~eF~~~~~~~~~l~~~F~~~D~d 684 (900)
T 1qxp_A 606 IRNYLTIFRKFDLDKSGSM-SAYEMRMAIEAAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRLEILFKIFKQLDPE 684 (900)
T ss_dssp HHHHHHHHGGGCTTCCSCC-BHHHHHHHHHHTTEECCHHHHHHHHHHTSCSSSBCCHHHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHhhCCCCCCeE-CHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCeEcHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 36788999999986 889 89999999999998888888887775 5789999999988764210
Q ss_pred ------------------------------------------------------------------------C-------
Q psy2947 328 ------------------------------------------------------------------------K------- 328 (441)
Q Consensus 328 ------------------------------------------------------------------------~------- 328 (441)
.
T Consensus 685 ~~G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~G~Is~~El~~~L~~~~~~~~ 764 (900)
T 1qxp_A 685 NTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGDDMEVSATELMNILNKVVTRHP 764 (900)
T ss_dssp CCSCEEEEHHHHHHHTCC--------------CCCCCC--------------CCCCTTCSSCBCHHHHTTTSCC----CC
T ss_pred CCceEEecHHHHHHHhhhccccccccccccccccccCCCCCChHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHhccccc
Confidence 0
Q ss_pred ----CCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCC
Q psy2947 329 ----AEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGL 404 (441)
Q Consensus 329 ----~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l 404 (441)
...+.+.+..+|+.+|.|++|.|+++||..++... ..++.+|+.+|.|++|.|+.+||+++++.+|..+
T Consensus 765 ~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~~~~-------~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~~l 837 (900)
T 1qxp_A 765 DLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI-------KKWQGIYKRFETDRSGTIGSNELPGAFEAAGFHL 837 (900)
T ss_dssp SCC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHHHHH-------HHHSSCC----CCSCC-------CCTTGGGTCCC
T ss_pred ccccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHHHHH-------HHHHHHHHHhCCCCCCccCHHHHHHHHHhcCCCC
Confidence 01123567778888888888888888888877654 3667789999999999999999999999899889
Q ss_pred CHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 405 SSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 405 ~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
++++++.+++.+| |++|.|+|+||+.++.+
T Consensus 838 s~~~~~~l~~~~d-d~dg~Is~~EF~~~~~~ 867 (900)
T 1qxp_A 838 NQHIYSMIIRRYS-DETGNMDFDNFISCLVR 867 (900)
T ss_dssp CSCCCC---------CCSCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHhc-CCCCeECHHHHHHHHHH
Confidence 9999999999999 99999999999988753
No 181
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.58 E-value=8.1e-15 Score=144.55 Aligned_cols=174 Identities=21% Similarity=0.157 Sum_probs=106.7
Q ss_pred CCCCcccEEeccCCCc----CcccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCch---------
Q psy2947 58 QYFSHAFLLSLSYTPI----GRRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPF--------- 123 (441)
Q Consensus 58 ~~l~~L~~l~l~~n~i----~~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~--------- 123 (441)
..+++|+.|+|++|.| |..+..+++|++|+|++|+++.+|.. |..+++|++|++++|.++ .+|.
T Consensus 96 ~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L 173 (452)
T 3zyi_A 96 RHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE--SIPSYAFNRVPSL 173 (452)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCC--EECTTTTTTCTTC
T ss_pred CCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcc--eeCHhHHhcCCcc
Confidence 3466666777766643 23455566666666666666655554 555666666666666554 3322
Q ss_pred -----------------hhhcCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCcCccCcc--cc-------------
Q psy2947 124 -----------------TLTFCKNLTHLYLDNNLLDALPGFLLSMPQLDTVYRHGNHNYFKST--FM------------- 171 (441)
Q Consensus 124 -----------------~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~N~~~~~~~--~~------------- 171 (441)
.+..+++|++|+|++|+++.+|. +..+++|+.|+|++|.+..... +.
T Consensus 174 ~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n 252 (452)
T 3zyi_A 174 MRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPN-LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNS 252 (452)
T ss_dssp CEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCC-CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTS
T ss_pred cEEeCCCCCCccccChhhccCCCCCCEEECCCCccccccc-ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCC
Confidence 24566677777777777776653 5566677777777776533211 00
Q ss_pred cccccccccccccchhHHH-HhhcccccCCc-hhhhhhhhcccccccccCCCCCCCchhhhHHHh
Q psy2947 172 WYHSDIHARIRSTSTRDEV-LRKQKKLHQPS-RLQDLAVQSVIASKENFFEPGLFPGPLVDYIAR 234 (441)
Q Consensus 172 ~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~-~l~~l~~l~~l~l~~n~~~~~~~p~~~~~~l~~ 234 (441)
.+....|..+..++.+..+ +++|.+..+|. .+..++.|+.+++++|++.+.+--.++..|+..
T Consensus 253 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~~~l~~~l~~ 317 (452)
T 3zyi_A 253 QVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLRE 317 (452)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTTHHHHHHHHH
T ss_pred cCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCchHHHHHHHH
Confidence 0112234456666666666 77888877764 356788888888888888876655556666544
No 182
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.58 E-value=9.5e-15 Score=143.55 Aligned_cols=176 Identities=19% Similarity=0.112 Sum_probs=106.4
Q ss_pred CCCCCcccEEeccCCCc---Cc-ccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCch-hhhcCCC
Q psy2947 57 PQYFSHAFLLSLSYTPI---GR-RIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPF-TLTFCKN 130 (441)
Q Consensus 57 ~~~l~~L~~l~l~~n~i---~~-~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~-~~~~l~~ 130 (441)
+..+++|+.|+|++|.| |. .+..+++|++|+|++|.++.+|.. |..+++|+.|++++|... +.+|. .+.++++
T Consensus 108 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l-~~i~~~~~~~l~~ 186 (440)
T 3zyj_A 108 FNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRL-SYISEGAFEGLSN 186 (440)
T ss_dssp GTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTC-CEECTTTTTTCSS
T ss_pred ccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCc-ceeCcchhhcccc
Confidence 34567778888877733 32 456677777777777777766553 666666666666653322 23443 3455555
Q ss_pred CCEEEccCCCCCccchhhcCCCCCCEEEccCCcCccCcc--cc-------------cccccccccccccchhHHH-Hhhc
Q psy2947 131 LTHLYLDNNLLDALPGFLLSMPQLDTVYRHGNHNYFKST--FM-------------WYHSDIHARIRSTSTRDEV-LRKQ 194 (441)
Q Consensus 131 L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~N~~~~~~~--~~-------------~~~~~~p~~l~~l~~~~~~-l~~~ 194 (441)
|++|++++|+++.+|. +..+++|+.|+|++|++..... +. .+....+..+..++.+..+ +++|
T Consensus 187 L~~L~L~~n~l~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 265 (440)
T 3zyj_A 187 LRYLNLAMCNLREIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHN 265 (440)
T ss_dssp CCEEECTTSCCSSCCC-CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTS
T ss_pred cCeecCCCCcCccccc-cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCC
Confidence 5555555555555542 4445555555555555322210 00 0112234556667777777 8888
Q ss_pred ccccCCc-hhhhhhhhcccccccccCCCCCCCchhhhHHHh
Q psy2947 195 KKLHQPS-RLQDLAVQSVIASKENFFEPGLFPGPLVDYIAR 234 (441)
Q Consensus 195 ~~~~~p~-~l~~l~~l~~l~l~~n~~~~~~~p~~~~~~l~~ 234 (441)
.+..+|. .+..++.|+.+++++|++.+.+--.++..|+..
T Consensus 266 ~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l~~l~~~~~~ 306 (440)
T 3zyj_A 266 NLTLLPHDLFTPLHHLERIHLHHNPWNCNCDILWLSWWIKD 306 (440)
T ss_dssp CCCCCCTTTTSSCTTCCEEECCSSCEECSSTTHHHHHHHHT
T ss_pred CCCccChhHhccccCCCEEEcCCCCccCCCCchHHHHHHHh
Confidence 8888775 457788999999999999887655566666654
No 183
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.58 E-value=3.6e-15 Score=152.69 Aligned_cols=163 Identities=12% Similarity=0.081 Sum_probs=91.6
Q ss_pred CCcccEEeccCCCc----C-cccCCCCCCCEEEccCCCCCc-CCcCccCCCCCcEEEccCCcCCCC-CCchhhhcCCCCC
Q psy2947 60 FSHAFLLSLSYTPI----G-RRIFKCDTVEVLSLKSNSLTS-LPPDIGRLTNLRVLCLTDNCLQNA-SIPFTLTFCKNLT 132 (441)
Q Consensus 60 l~~L~~l~l~~n~i----~-~~~~~l~~L~~L~l~~n~l~~-lp~~~~~l~~L~~L~l~~n~l~~~-~~p~~~~~l~~L~ 132 (441)
+++|+.|++++|.+ | ..+..+++|++|++++|.++. .|..+..+++|+.|++++|.++ + .+|..+..+++|+
T Consensus 398 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~~l~~L~ 476 (606)
T 3vq2_A 398 LEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFK-DNTLSNVFANTTNLT 476 (606)
T ss_dssp CTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEG-GGEECSCCTTCTTCC
T ss_pred CCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCC-CcchHHhhccCCCCC
Confidence 44455555555521 1 234455555555555555552 3344555555666666655555 2 2455555556666
Q ss_pred EEEccCCCCCcc-chhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhh-hh
Q psy2947 133 HLYLDNNLLDAL-PGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLA-VQ 209 (441)
Q Consensus 133 ~L~l~~n~l~~l-p~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~-~l 209 (441)
+|++++|+++.+ |..+..+++|+.|++++|++ .+..|..+..++.+..+ +++|.+..+|..+..++ +|
T Consensus 477 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l---------~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L 547 (606)
T 3vq2_A 477 FLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNL---------LFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSL 547 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCC---------SCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTC
T ss_pred EEECCCCcCCccChhhhcccccCCEEECCCCcC---------CCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccC
Confidence 666666666444 34455566666666666653 23345666666666666 67777777776666665 47
Q ss_pred cccccccccCCCCCCCchhhhHH
Q psy2947 210 SVIASKENFFEPGLFPGPLVDYI 232 (441)
Q Consensus 210 ~~l~l~~n~~~~~~~p~~~~~~l 232 (441)
+.+++++|++.+.+-..++.+|+
T Consensus 548 ~~l~l~~N~~~c~c~~~~~~~~l 570 (606)
T 3vq2_A 548 AFFNLTNNSVACICEHQKFLQWV 570 (606)
T ss_dssp CEEECCSCCCCCSSTTHHHHTTT
T ss_pred cEEEccCCCcccCCccHHHHHHH
Confidence 77777777776644334444544
No 184
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=99.58 E-value=2.9e-14 Score=124.75 Aligned_cols=146 Identities=12% Similarity=0.196 Sum_probs=117.7
Q ss_pred ccchHHHHHhhhcccc---CCCccCHHHHHHHHHHcCCCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCCCHH
Q psy2947 262 KTPYLEFRECFFLFAR---NGTIKTLDELSVIMRSLGMSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIPK 334 (441)
Q Consensus 262 ~~~~~~l~~~f~~~d~---~G~i~~~~el~~~~~~~~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~~~~ 334 (441)
.-...+++++|..+|. +|.| +.+|+..+++.++......++..++. +++|.|+++||..++..... ....+
T Consensus 18 ~~~~~el~~~f~~~D~~~~~G~i-~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~-~~~~~ 95 (204)
T 1jba_A 18 AADAAQLQEWYKKFLEECPSGTL-FMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLR-GTLEH 95 (204)
T ss_dssp HHHHHHHHHHHHHHHSSSTTCCE-EHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSS-CCCTH
T ss_pred CCCHHHHHHHHHHHHhhCCCCCc-CHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHcc-CCHHH
Confidence 3456677888888886 4788 89999999999988777777776664 68999999999999987643 35678
Q ss_pred HHHHHHHhhcCCCCCcccHHHHHHHHHhhcc----------------CCCChHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 335 EVVDAFKAADTTKSGKLSFPDFLKVMHTHSK----------------AEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 335 ~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~----------------~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
.+..+|+.+|.|++|.|+++||..++..... .....+.+..+|+.+|.|++|.|+++||++++.
T Consensus 96 ~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~ 175 (204)
T 1jba_A 96 KLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGAR 175 (204)
T ss_dssp HHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 8999999999999999999999998876521 113356799999999999999999999999995
Q ss_pred HhCCCCCHHHHHHHHHH
Q psy2947 399 NWGEGLSSKEVDQIFRE 415 (441)
Q Consensus 399 ~~~~~l~~~~~~~l~~~ 415 (441)
. ..++..++..
T Consensus 176 ~------~~~~~~~~~~ 186 (204)
T 1jba_A 176 R------DKWVMKMLQM 186 (204)
T ss_dssp T------TTTHHHHHHS
T ss_pred c------ChHHHHHHHh
Confidence 3 3445556653
No 185
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.58 E-value=7.3e-15 Score=137.21 Aligned_cols=148 Identities=23% Similarity=0.252 Sum_probs=127.4
Q ss_pred CCCCCcccEEeccCCCcC--cccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEE
Q psy2947 57 PQYFSHAFLLSLSYTPIG--RRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHL 134 (441)
Q Consensus 57 ~~~l~~L~~l~l~~n~i~--~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 134 (441)
...+++|+.|++++|.+. +.+..+++|+.|++++|+++.+|. +..+++|+.|++++|.++ .+|. +..+++|++|
T Consensus 81 ~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~--~~~~-l~~l~~L~~L 156 (308)
T 1h6u_A 81 LKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTP-LAGLSNLQVLYLDLNQIT--NISP-LAGLTNLQYL 156 (308)
T ss_dssp GTTCCSCCEEECCSCCCSCCGGGTTCTTCCEEECTTSCCCCCGG-GTTCTTCCEEECCSSCCC--CCGG-GGGCTTCCEE
T ss_pred HccCCCCCEEEccCCcCCCchhhcCCCCCCEEECCCCCCCCchh-hcCCCCCCEEECCCCccC--cCcc-ccCCCCccEE
Confidence 455889999999999553 457889999999999999998875 999999999999999998 6665 8999999999
Q ss_pred EccCCCCCccchhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhcccc
Q psy2947 135 YLDNNLLDALPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIA 213 (441)
Q Consensus 135 ~l~~n~l~~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~ 213 (441)
++++|+++.++. +..+++|+.|++++|.+.... . +..++.+..+ +++|.+..++ .+..+++|+.++
T Consensus 157 ~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~----------~-l~~l~~L~~L~L~~N~l~~~~-~l~~l~~L~~L~ 223 (308)
T 1h6u_A 157 SIGNAQVSDLTP-LANLSKLTTLKADDNKISDIS----------P-LASLPNLIEVHLKNNQISDVS-PLANTSNLFIVT 223 (308)
T ss_dssp ECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCG----------G-GGGCTTCCEEECTTSCCCBCG-GGTTCTTCCEEE
T ss_pred EccCCcCCCChh-hcCCCCCCEEECCCCccCcCh----------h-hcCCCCCCEEEccCCccCccc-cccCCCCCCEEE
Confidence 999999999887 889999999999999974322 1 5666667667 8889998888 489999999999
Q ss_pred cccccCCC
Q psy2947 214 SKENFFEP 221 (441)
Q Consensus 214 l~~n~~~~ 221 (441)
+++|++..
T Consensus 224 l~~N~i~~ 231 (308)
T 1h6u_A 224 LTNQTITN 231 (308)
T ss_dssp EEEEEEEC
T ss_pred ccCCeeec
Confidence 99998865
No 186
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.58 E-value=6e-15 Score=142.63 Aligned_cols=105 Identities=26% Similarity=0.300 Sum_probs=71.9
Q ss_pred CCCcccEEeccCCCcC----cccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCchh-hhcCCCCC
Q psy2947 59 YFSHAFLLSLSYTPIG----RRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPFT-LTFCKNLT 132 (441)
Q Consensus 59 ~l~~L~~l~l~~n~i~----~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~~-~~~l~~L~ 132 (441)
.+++|+.|++++|.+. ..+..+++|++|+|++|.++.+|+. |..+++|++|++++|.++ .+|.. +..+++|+
T Consensus 67 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--~l~~~~~~~l~~L~ 144 (390)
T 3o6n_A 67 SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS--SLPRGIFHNTPKLT 144 (390)
T ss_dssp HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC--CCCTTTTTTCTTCC
T ss_pred ccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC--cCCHHHhcCCCCCc
Confidence 3567777777777432 3566677777777777777766544 677777777777777776 56655 36777777
Q ss_pred EEEccCCCCCccc-hhhcCCCCCCEEEccCCcCc
Q psy2947 133 HLYLDNNLLDALP-GFLLSMPQLDTVYRHGNHNY 165 (441)
Q Consensus 133 ~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~ 165 (441)
+|++++|+++.++ ..+..+++|+.|++++|.+.
T Consensus 145 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 145 TLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 178 (390)
T ss_dssp EEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCS
T ss_pred EEECCCCccCccChhhccCCCCCCEEECCCCcCC
Confidence 7777777776664 45667777777777777654
No 187
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.58 E-value=2.8e-15 Score=155.87 Aligned_cols=138 Identities=30% Similarity=0.350 Sum_probs=109.9
Q ss_pred CCCCCcccEEeccCC---CcCcccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCE
Q psy2947 57 PQYFSHAFLLSLSYT---PIGRRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTH 133 (441)
Q Consensus 57 ~~~l~~L~~l~l~~n---~i~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~ 133 (441)
+..+..|+.|+|++| .||..++.+++|++|+|++|.|+.+|..|+.+++|+.|+|++|.|+ .+|..++.|++|++
T Consensus 220 ~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~--~lp~~~~~l~~L~~ 297 (727)
T 4b8c_D 220 KYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT--SLPAELGSCFQLKY 297 (727)
T ss_dssp --CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS--SCCSSGGGGTTCSE
T ss_pred hccCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCC--ccChhhcCCCCCCE
Confidence 345788999999998 5677788899999999999999999988999999999999999998 88999999999999
Q ss_pred EEccCCCCCccchhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHH-H-Hhhccc-ccCCchhhh
Q psy2947 134 LYLDNNLLDALPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDE-V-LRKQKK-LHQPSRLQD 205 (441)
Q Consensus 134 L~l~~n~l~~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~-~-l~~~~~-~~~p~~l~~ 205 (441)
|+|++|.|+.||..|+.+++|+.|+|++|++ .+.+|..+..+..... + +.+|.+ ..+|..+..
T Consensus 298 L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l---------~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~ 363 (727)
T 4b8c_D 298 FYFFDNMVTTLPWEFGNLCNLQFLGVEGNPL---------EKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRF 363 (727)
T ss_dssp EECCSSCCCCCCSSTTSCTTCCCEECTTSCC---------CSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---
T ss_pred EECCCCCCCccChhhhcCCCccEEeCCCCcc---------CCCChHHHhhcchhhhHHhhccCcccCcCccccce
Confidence 9999999999998899999999999999994 3455666655443332 2 666666 455654433
No 188
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=99.58 E-value=2e-15 Score=132.65 Aligned_cols=141 Identities=16% Similarity=0.239 Sum_probs=113.3
Q ss_pred eecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHH-HHHhCCCcccHHHHHHHHHhhcCCC-----
Q psy2947 259 FTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKK-YLAEKGGKLSFPDFLKVMHTHSKAE----- 330 (441)
Q Consensus 259 ~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~-~~~~~~g~i~~~ef~~~~~~~~~~~----- 330 (441)
.+++.++..+++.|..+|.+ |.| +.+|+..++ .++..+...++.. ++.+++|.|+++||..++.......
T Consensus 22 ~ls~~~~~~l~~~F~~~D~d~dG~I-s~~El~~~~-~lg~~~~~~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~~~~ 99 (208)
T 2ct9_A 22 GFSHSQITRLYSRFTSLDKGENGTL-SREDFQRIP-ELAINPLGDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKS 99 (208)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEE-CTGGGGGCH-HHHTSTTHHHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC-----
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcC-cHHHHHHHH-HcCCCCcHHHHHHHHcCCCCCcCcHHHHHHHHHhhccccchhhh
Confidence 45678899999999999975 888 889998864 5666665554433 3357899999999999998664321
Q ss_pred ----------CCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHH----HHHhCCCCCCcccHHHHHHH
Q psy2947 331 ----------DIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDA----FKAADTTKSGTVPAKYLKHV 396 (441)
Q Consensus 331 ----------~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~----f~~~D~~~~G~is~~ef~~~ 396 (441)
...+.++.+|+.+|.|++|.|+.+||..++....+.....+++..+ |+.+|.|+||.|+++||..+
T Consensus 100 ~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~ 179 (208)
T 2ct9_A 100 KDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKV 179 (208)
T ss_dssp ------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHT
T ss_pred cccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 1467899999999999999999999999998764445566777776 99999999999999999999
Q ss_pred HHHhC
Q psy2947 397 LVNWG 401 (441)
Q Consensus 397 l~~~~ 401 (441)
+...+
T Consensus 180 ~~~~~ 184 (208)
T 2ct9_A 180 LEKVD 184 (208)
T ss_dssp TTTSC
T ss_pred HhccC
Confidence 97644
No 189
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=99.57 E-value=2.4e-14 Score=118.01 Aligned_cols=133 Identities=20% Similarity=0.317 Sum_probs=115.2
Q ss_pred ccchHHHHHhhhcccc---CCCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHHHHHH
Q psy2947 262 KTPYLEFRECFFLFAR---NGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVVD 338 (441)
Q Consensus 262 ~~~~~~l~~~f~~~d~---~G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 338 (441)
.+++.++++.|..+|. +|.| +..++..+++.++..++..++..++..-+..|+++||..++..........+.++.
T Consensus 10 ~~~~~~l~~~F~~~D~d~~~G~i-~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~i~~~eF~~~~~~~~~~~~~~~~l~~ 88 (146)
T 2qac_A 10 LEEKVDESDVRIYFNEKSSGGKI-SIDNASYNARKLGLAPSSIDEKKIKELYGDNLTYEQYLEYLSICVHDKDNVEELIK 88 (146)
T ss_dssp HHHHSCHHHHHHHHHHHCBTTBE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHCSEECHHHHHHHHHHTCCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHhCccCCCCcc-cHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCcchHHHHHH
Confidence 3466778999999985 5788 89999999999999999999999887433339999999999876666667889999
Q ss_pred HHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 339 AFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 339 ~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
+|+.+|.|++|.|+.+||+.++... +.....+++..+|+.+ |++|.|+++||.++|.
T Consensus 89 ~F~~~D~d~~G~I~~~el~~~l~~~-g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~ 145 (146)
T 2qac_A 89 MFAHFDNNCTGYLTKSQMKNILTTW-GDALTDQEAIDALNAF--SSEDNIDYKLFCEDIL 145 (146)
T ss_dssp HHHTTCTTCSSEEEHHHHHHHHHHS-SSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHh-CCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence 9999999999999999999999876 4456678999999999 9999999999999874
No 190
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.57 E-value=8e-15 Score=139.39 Aligned_cols=120 Identities=20% Similarity=0.305 Sum_probs=98.5
Q ss_pred CCCCC-ccCC-CCccCCC-CCCCCCCcccEEeccCCCcCcccCCCCCCCEEEccC-CCCCcCCcC-ccCCCCCcEEEccC
Q psy2947 39 CQRNC-SLEV-GGICSHI-WIPQYFSHAFLLSLSYTPIGRRIFKCDTVEVLSLKS-NSLTSLPPD-IGRLTNLRVLCLTD 113 (441)
Q Consensus 39 C~~~c-~~~~-~~~c~~~-~~~~~l~~L~~l~l~~n~i~~~~~~l~~L~~L~l~~-n~l~~lp~~-~~~l~~L~~L~l~~ 113 (441)
||..| .|.. ++.|+.. ++ ..||. +..+++|+.|+|++ |.|+.+|+. |..+++|+.|+|++
T Consensus 1 cp~~c~~C~~~~v~~~~~n~l--------------~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~ 65 (347)
T 2ifg_A 1 CPDACCPHGSSGLRCTRDGAL--------------DSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVK 65 (347)
T ss_dssp CCSSSCCSSSSCEECCSSCCC--------------TTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCS
T ss_pred CCCcCccccCCEEEcCCCCCC--------------CccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCC
Confidence 89999 8843 3556543 21 14788 88999999999996 999988865 99999999999999
Q ss_pred CcCCCCCCchhhhcCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCcCccCccccccc
Q psy2947 114 NCLQNASIPFTLTFCKNLTHLYLDNNLLDALPGFLLSMPQLDTVYRHGNHNYFKSTFMWYH 174 (441)
Q Consensus 114 n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 174 (441)
|+|+ +..|..|.++++|++|+|++|+|+.+|..+.....|+.|+|.+|++.|.|.+.|+.
T Consensus 66 N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~l~~~~ 125 (347)
T 2ifg_A 66 SGLR-FVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQ 125 (347)
T ss_dssp SCCC-EECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCCCCEEECCSSCCCCCGGGHHHH
T ss_pred Cccc-eeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCCceEEEeeCCCccCCCccHHHH
Confidence 9998 55566789999999999999999999854443334999999999999999876643
No 191
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.57 E-value=1.8e-14 Score=119.29 Aligned_cols=103 Identities=25% Similarity=0.285 Sum_probs=90.8
Q ss_pred CCcccEEeccCCC-----cCcccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEE
Q psy2947 60 FSHAFLLSLSYTP-----IGRRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHL 134 (441)
Q Consensus 60 l~~L~~l~l~~n~-----i~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 134 (441)
.++|+.|++++|. +|..+..+++|++|++++|.++.+ ..+..+++|+.|++++|.++ +.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVS-GGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCC-SCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCccc-chHHHHhhhCCCCCEE
Confidence 4789999999984 455667889999999999999987 67999999999999999998 4588878889999999
Q ss_pred EccCCCCCccc--hhhcCCCCCCEEEccCCcC
Q psy2947 135 YLDNNLLDALP--GFLLSMPQLDTVYRHGNHN 164 (441)
Q Consensus 135 ~l~~n~l~~lp--~~~~~l~~L~~L~l~~N~~ 164 (441)
++++|+++.+| ..+..+++|+.|++++|++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l 125 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEV 125 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGG
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcc
Confidence 99999998876 7889999999999999985
No 192
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.56 E-value=6.9e-15 Score=136.16 Aligned_cols=146 Identities=21% Similarity=0.221 Sum_probs=109.0
Q ss_pred CCCcccEEeccCCCcCc--ccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEc
Q psy2947 59 YFSHAFLLSLSYTPIGR--RIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYL 136 (441)
Q Consensus 59 ~l~~L~~l~l~~n~i~~--~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l 136 (441)
.+++|+.|++++|.+.. .+..+++|++|++++|.++.+|. +..+++|++|++++|+++ .++ .+..+++|++|++
T Consensus 66 ~l~~L~~L~L~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~n~i~--~~~-~l~~l~~L~~L~l 141 (291)
T 1h6t_A 66 YLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSS-LKDLKKLKSLSLEHNGIS--DIN-GLVHLPQLESLYL 141 (291)
T ss_dssp GCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCGGG-GTTCTTCCEEECTTSCCC--CCG-GGGGCTTCCEEEC
T ss_pred cCCCCCEEEccCCccCCCcccccCCCCCEEECCCCcCCCChh-hccCCCCCEEECCCCcCC--CCh-hhcCCCCCCEEEc
Confidence 46788888888884431 26778888888888888887654 788888888888888887 453 5778888888888
Q ss_pred cCCCCCccchhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhcccccc
Q psy2947 137 DNNLLDALPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIASK 215 (441)
Q Consensus 137 ~~n~l~~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~l~ 215 (441)
++|+++.+ ..+..+++|+.|++++|.+... +. +..++.+..+ +++|.+..+| .+..+++|+.|+++
T Consensus 142 ~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~----------~~-l~~l~~L~~L~L~~N~i~~l~-~l~~l~~L~~L~l~ 208 (291)
T 1h6t_A 142 GNNKITDI-TVLSRLTKLDTLSLEDNQISDI----------VP-LAGLTKLQNLYLSKNHISDLR-ALAGLKNLDVLELF 208 (291)
T ss_dssp CSSCCCCC-GGGGGCTTCSEEECCSSCCCCC----------GG-GTTCTTCCEEECCSSCCCBCG-GGTTCTTCSEEEEE
T ss_pred cCCcCCcc-hhhccCCCCCEEEccCCccccc----------hh-hcCCCccCEEECCCCcCCCCh-hhccCCCCCEEECc
Confidence 88888777 4577788888888888885332 22 5556666666 7778777776 48888888888888
Q ss_pred cccCCC
Q psy2947 216 ENFFEP 221 (441)
Q Consensus 216 ~n~~~~ 221 (441)
+|++..
T Consensus 209 ~n~i~~ 214 (291)
T 1h6t_A 209 SQECLN 214 (291)
T ss_dssp EEEEEC
T ss_pred CCcccC
Confidence 887654
No 193
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=99.56 E-value=6.2e-15 Score=124.39 Aligned_cols=136 Identities=14% Similarity=0.267 Sum_probs=110.2
Q ss_pred eecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCCC
Q psy2947 259 FTFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDI 332 (441)
Q Consensus 259 ~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~~ 332 (441)
.+++.++..+++.|..+|.+ |.| +..|+..+++.++..++..++..++. +++|.|+++||..++..... ...
T Consensus 20 ~l~~~~~~~l~~~F~~~D~~~~G~i-~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-~~~ 97 (166)
T 2aao_A 20 SLSEEEIAGLKEMFNMIDADKSGQI-TFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNK-IER 97 (166)
T ss_dssp HSCHHHHHHHHHHHHHHCTTCCSSB-CHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHH-HHT
T ss_pred hCCHHHHHHHHHHHHHhCCCCCCeE-eHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhh-ccc
Confidence 35677889999999999975 889 89999999999998888888877764 68899999999998864321 123
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
.+.+..+|+.+|.|++|.|+.+||..++.... ...+++..+|+.+|.+++|.|+++||..++..
T Consensus 98 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~---~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 161 (166)
T 2aao_A 98 EDHLFAAFTYFDKDGSGYITPDELQQACEEFG---VEDVRIEELMRDVDQDNDGRIDYNEFVAMMQK 161 (166)
T ss_dssp THHHHHHHHHHCTTCSSSBCHHHHHHHTCC-----------CCHHHHHCTTCSSSBCHHHHHHHHC-
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC---CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 47899999999999999999999999987652 33567889999999999999999999999865
No 194
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=99.56 E-value=4e-14 Score=125.95 Aligned_cols=140 Identities=14% Similarity=0.186 Sum_probs=110.1
Q ss_pred eecccchHHHHHhhhccccC----CCccCHHHHHHHHHHcCCCcCHHHH----HHHHHhCCCcccHHHHHHHHHhhcCCC
Q psy2947 259 FTFKTPYLEFRECFFLFARN----GTIKTLDELSVIMRSLGMSPTIAEL----KKYLAEKGGKLSFPDFLKVMHTHSKAE 330 (441)
Q Consensus 259 ~l~~~~~~~l~~~f~~~d~~----G~i~~~~el~~~~~~~~~~~~~~~~----~~~~~~~~g~i~~~ef~~~~~~~~~~~ 330 (441)
.++..++..+.+.|..+|.+ |.| +.+|+..++.. ........+ ..++.+++|.|+++||..++.......
T Consensus 41 ~ls~~ei~~l~~~F~~~D~d~~~~G~I-~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~ 118 (226)
T 2zfd_A 41 VFSVSEIEALYELFKKISSAVIDDGLI-NKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNA 118 (226)
T ss_dssp SCCHHHHHHHHHHHHHHHTSSSCSSSB-CHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTS
T ss_pred CCCHHHHHHHHHHHHHhCcccCCCCeE-cHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCC
Confidence 45678899999999999964 888 89999999886 322222233 333357899999999999998776555
Q ss_pred CCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhh---ccCCCChHH----HHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 331 DIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTH---SKAEDIPKE----VVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 331 ~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~---~~~~~~~~~----~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
...+.++.+|+.+|.|++|.|+.+||..++... .+.....++ ++.+|+.+|.|++|.|+++||.+++...
T Consensus 119 ~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~~ 195 (226)
T 2zfd_A 119 PIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRH 195 (226)
T ss_dssp CHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence 667889999999999999999999999998632 233333444 4567789999999999999999999863
No 195
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=99.56 E-value=3.9e-14 Score=123.26 Aligned_cols=131 Identities=15% Similarity=0.240 Sum_probs=105.5
Q ss_pred HHHHHhhhccc---cCCCccCHHHHHHHHHHcCCCcCHH-HHHHHHH----hCCCcccHHHHHHHHHhhcCCCCCHHHHH
Q psy2947 266 LEFRECFFLFA---RNGTIKTLDELSVIMRSLGMSPTIA-ELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIPKEVV 337 (441)
Q Consensus 266 ~~l~~~f~~~d---~~G~i~~~~el~~~~~~~~~~~~~~-~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~~~~~~~ 337 (441)
.+++++|..+| .+|.| +..++..+++.++..+... ++..++. +++|.|+++||..++..... ....+.++
T Consensus 14 ~el~~~f~~fd~~~~~G~i-~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~-~~~~~~~~ 91 (198)
T 2r2i_A 14 TECHQWYKKFMTECPSGQL-TLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLK-GKVDQKLR 91 (198)
T ss_dssp SCHHHHHHHHHHHCTTSEE-CHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSS-CCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcC-CHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHcc-CchHHHHH
Confidence 34556666666 46889 8999999999888766543 3555553 68999999999999987653 34578899
Q ss_pred HHHHhhcCCCCCcccHHHHHHHHHhhcc-----CCCC-hHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 338 DAFKAADTTKSGKLSFPDFLKVMHTHSK-----AEDI-PKEVVDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 338 ~~f~~~D~d~~g~i~~~ef~~~~~~~~~-----~~~~-~~~~~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
.+|+.+|.|++|.|+++||..++..... .... .+.+..+|+.+|.|++|.|+++||+.++.
T Consensus 92 ~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 158 (198)
T 2r2i_A 92 WYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQ 158 (198)
T ss_dssp HHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred HHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 9999999999999999999999987631 2223 35589999999999999999999999985
No 196
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.56 E-value=8.7e-15 Score=146.31 Aligned_cols=136 Identities=19% Similarity=0.232 Sum_probs=116.4
Q ss_pred cccchHHHHHhhhccccC--CCccCHHHHHHHHHHc--------CCCcCHHHHHHHHH----hCCCcccHHHHHHHHHhh
Q psy2947 261 FKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSL--------GMSPTIAELKKYLA----EKGGKLSFPDFLKVMHTH 326 (441)
Q Consensus 261 ~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~--------~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~ 326 (441)
+.+++.+++++|..+|.+ |.| +.+|+..+++.+ +..++..++..++. +++|.|+++||..++...
T Consensus 350 ~~~~~~~l~~~F~~~D~d~dG~I-~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 428 (504)
T 3q5i_A 350 TLEERKELTDIFKKLDKNGDGQL-DKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDK 428 (504)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEE-CHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCH
T ss_pred cHHHHHHHHHHHHeeCCCCCCeE-cHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhh
Confidence 678889999999999986 888 899999998887 44666777777664 689999999999988754
Q ss_pred cCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhC
Q psy2947 327 SKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWG 401 (441)
Q Consensus 327 ~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~ 401 (441)
......+.++.+|+.+|.|++|.|+.+||..++.. ....+++++++|+.+|.|+||.|+++||.++|...+
T Consensus 429 -~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~---~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 499 (504)
T 3q5i_A 429 -QILFSEERLRRAFNLFDTDKSGKITKEELANLFGL---TSISEKTWNDVLGEADQNKDNMIDFDEFVSMMHKIC 499 (504)
T ss_dssp -HHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTC---SCCCHHHHHHHHHTTCSSCSSSEEHHHHHHHHHHHC
T ss_pred -hcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh---CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhc
Confidence 22345788999999999999999999999998865 235578999999999999999999999999999875
No 197
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.56 E-value=6.7e-15 Score=150.67 Aligned_cols=173 Identities=16% Similarity=0.155 Sum_probs=129.6
Q ss_pred cCCCCCccCC---CCccCCCC---CCCCC-CcccEEeccCCCc----CcccCCCCCCCEEEccCCCCCcC-CcCccCCCC
Q psy2947 38 ACQRNCSLEV---GGICSHIW---IPQYF-SHAFLLSLSYTPI----GRRIFKCDTVEVLSLKSNSLTSL-PPDIGRLTN 105 (441)
Q Consensus 38 ~C~~~c~~~~---~~~c~~~~---~~~~l-~~L~~l~l~~n~i----~~~~~~l~~L~~L~l~~n~l~~l-p~~~~~l~~ 105 (441)
.|+..|.|.. .+.|...+ +|..+ .+++.|++++|.| |..+..+++|++|+|++|+++.+ |..|..+++
T Consensus 3 ~~~~~C~~~~~~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 82 (606)
T 3t6q_A 3 SSDQKCIEKEVNKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHR 82 (606)
T ss_dssp ---CCCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTT
T ss_pred cccCceecccCCceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccc
Confidence 3677788852 26677643 34433 5789999999954 46788999999999999999965 566999999
Q ss_pred CcEEEccCCcCCCCCCchhhhcCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCcCccCccccccccccccccccc
Q psy2947 106 LRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLDAL-PGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRST 184 (441)
Q Consensus 106 L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~l-p~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l 184 (441)
|++|++++|.++ +..|..++.+++|++|++++|.++.+ |..++.+++|++|++++|.+.... +|..+ .+
T Consensus 83 L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~--------~~~~~-~l 152 (606)
T 3t6q_A 83 LDTLVLTANPLI-FMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIK--------LPKGF-PT 152 (606)
T ss_dssp CCEEECTTCCCS-EECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCC--------CCTTC-CC
T ss_pred cCeeeCCCCccc-ccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccC--------ccccc-CC
Confidence 999999999998 56677899999999999999999888 577899999999999999975432 12222 24
Q ss_pred chhHHH-HhhcccccC-Cchhhhhhhhc--ccccccccCC
Q psy2947 185 STRDEV-LRKQKKLHQ-PSRLQDLAVQS--VIASKENFFE 220 (441)
Q Consensus 185 ~~~~~~-l~~~~~~~~-p~~l~~l~~l~--~l~l~~n~~~ 220 (441)
+.+..+ +.+|.+..+ |..+..++.++ .+++++|.+.
T Consensus 153 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 153 EKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred cccCEEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 455555 666776555 45577777777 6777777654
No 198
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.56 E-value=6.3e-15 Score=134.31 Aligned_cols=145 Identities=19% Similarity=0.168 Sum_probs=114.2
Q ss_pred CCCcccEEeccCCCcC--cccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEc
Q psy2947 59 YFSHAFLLSLSYTPIG--RRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYL 136 (441)
Q Consensus 59 ~l~~L~~l~l~~n~i~--~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l 136 (441)
.+++|+.|++++|.|. +.+..+++|+.|+|++|+++.+|+ +..+++|+.|++++|+++ .+|. +.. ++|++|++
T Consensus 39 ~l~~L~~L~l~~n~i~~l~~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~--~l~~-~~~-~~L~~L~L 113 (263)
T 1xeu_A 39 ELSGVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLK--NLNG-IPS-ACLSRLFL 113 (263)
T ss_dssp HHTTCSEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCS--CCTT-CCC-SSCCEEEC
T ss_pred hcCcCcEEECcCCCcccchHHhhCCCCCEEECCCCccCCChh-hccCCCCCEEECCCCccC--CcCc-ccc-CcccEEEc
Confidence 4678889999988442 256778899999999999998877 888999999999999987 5665 333 88999999
Q ss_pred cCCCCCccchhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhcccccc
Q psy2947 137 DNNLLDALPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIASK 215 (441)
Q Consensus 137 ~~n~l~~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~l~ 215 (441)
++|+|+.+| .+..+++|+.|++++|++... + .+..++.+..+ +++|.+..+ ..+..++.|+.++++
T Consensus 114 ~~N~l~~~~-~l~~l~~L~~L~Ls~N~i~~~----------~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~ 180 (263)
T 1xeu_A 114 DNNELRDTD-SLIHLKNLEILSIRNNKLKSI----------V-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLT 180 (263)
T ss_dssp CSSCCSBSG-GGTTCTTCCEEECTTSCCCBC----------G-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEE
T ss_pred cCCccCCCh-hhcCcccccEEECCCCcCCCC----------h-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCC
Confidence 999998886 478889999999999986432 2 35556666666 778888777 578888899999999
Q ss_pred cccCCC
Q psy2947 216 ENFFEP 221 (441)
Q Consensus 216 ~n~~~~ 221 (441)
+|++..
T Consensus 181 ~N~~~~ 186 (263)
T 1xeu_A 181 GQKCVN 186 (263)
T ss_dssp EEEEEC
T ss_pred CCcccC
Confidence 988765
No 199
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.56 E-value=1.9e-14 Score=124.67 Aligned_cols=112 Identities=20% Similarity=0.253 Sum_probs=97.0
Q ss_pred CcccEEeccCCCc---Cc--ccCCCCCCCEEEccCCCCCcC-CcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEE
Q psy2947 61 SHAFLLSLSYTPI---GR--RIFKCDTVEVLSLKSNSLTSL-PPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHL 134 (441)
Q Consensus 61 ~~L~~l~l~~n~i---~~--~~~~l~~L~~L~l~~n~l~~l-p~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 134 (441)
.+|+.|++++|.| +. .+..+++|++|+|++|+|+.+ |..|..+++|++|++++|+|+ +..|..+..+++|++|
T Consensus 29 ~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L 107 (192)
T 1w8a_A 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK-EISNKMFLGLHQLKTL 107 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCC-EECSSSSTTCTTCCEE
T ss_pred CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCC-ccCHHHhcCCCCCCEE
Confidence 4899999999954 33 377899999999999999976 566999999999999999998 4445568999999999
Q ss_pred EccCCCCCcc-chhhcCCCCCCEEEccCCcCccCcccccc
Q psy2947 135 YLDNNLLDAL-PGFLLSMPQLDTVYRHGNHNYFKSTFMWY 173 (441)
Q Consensus 135 ~l~~n~l~~l-p~~~~~l~~L~~L~l~~N~~~~~~~~~~~ 173 (441)
+|++|+|+.+ |..+..+++|++|++++|++.+.+.+.|+
T Consensus 108 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~ 147 (192)
T 1w8a_A 108 NLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWF 147 (192)
T ss_dssp ECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHH
T ss_pred ECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHH
Confidence 9999999866 68899999999999999999988866543
No 200
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.55 E-value=6.5e-15 Score=136.37 Aligned_cols=146 Identities=22% Similarity=0.249 Sum_probs=125.3
Q ss_pred CCCcccEEeccCCCcC--cccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEc
Q psy2947 59 YFSHAFLLSLSYTPIG--RRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYL 136 (441)
Q Consensus 59 ~l~~L~~l~l~~n~i~--~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l 136 (441)
.+++|+.|++++|.+. +.+..+++|++|++++|+++.+++ +..+++|+.|++++|.++ .+| .+..+++|++|++
T Consensus 44 ~l~~L~~L~l~~~~i~~~~~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~--~~~-~l~~l~~L~~L~L 119 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVK--DLS-SLKDLKKLKSLSL 119 (291)
T ss_dssp HHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCC--CGG-GGTTCTTCCEEEC
T ss_pred hcCcccEEEccCCCcccChhHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCC--CCh-hhccCCCCCEEEC
Confidence 4788999999999553 347789999999999999998887 999999999999999998 565 4899999999999
Q ss_pred cCCCCCccchhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhcccccc
Q psy2947 137 DNNLLDALPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIASK 215 (441)
Q Consensus 137 ~~n~l~~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~l~ 215 (441)
++|+++.++ .+..+++|+.|++++|.+... ..+..++.+..+ +++|.+..+++ +..++.|+.|+++
T Consensus 120 ~~n~i~~~~-~l~~l~~L~~L~l~~n~l~~~-----------~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~ 186 (291)
T 1h6t_A 120 EHNGISDIN-GLVHLPQLESLYLGNNKITDI-----------TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLS 186 (291)
T ss_dssp TTSCCCCCG-GGGGCTTCCEEECCSSCCCCC-----------GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECC
T ss_pred CCCcCCCCh-hhcCCCCCCEEEccCCcCCcc-----------hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECC
Confidence 999999885 578899999999999996432 345666677777 88899988886 9999999999999
Q ss_pred cccCCC
Q psy2947 216 ENFFEP 221 (441)
Q Consensus 216 ~n~~~~ 221 (441)
+|.+..
T Consensus 187 ~N~i~~ 192 (291)
T 1h6t_A 187 KNHISD 192 (291)
T ss_dssp SSCCCB
T ss_pred CCcCCC
Confidence 998764
No 201
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=99.55 E-value=2.8e-14 Score=121.97 Aligned_cols=133 Identities=11% Similarity=0.163 Sum_probs=107.1
Q ss_pred ccchHHHHHhhhccccCCCccCHHHHHHHHHHcCCCcCHHHHHHHHH-------hCCCcccHHHHHHHHHhhcCCCCCHH
Q psy2947 262 KTPYLEFRECFFLFARNGTIKTLDELSVIMRSLGMSPTIAELKKYLA-------EKGGKLSFPDFLKVMHTHSKAEDIPK 334 (441)
Q Consensus 262 ~~~~~~l~~~f~~~d~~G~i~~~~el~~~~~~~~~~~~~~~~~~~~~-------~~~g~i~~~ef~~~~~~~~~~~~~~~ 334 (441)
..++.++++.|..+|.+|.| +.+++..++ +..++..++..++. +++|.|+++||..++..... ....+
T Consensus 24 ~~~~~~~~~~F~~~D~dG~I-~~~el~~~l---g~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~-~~~~~ 98 (179)
T 3a8r_A 24 NDGWAAVEKRFNQLQVDGVL-LRSRFGKCI---GMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTD-QGFDN 98 (179)
T ss_dssp CCCHHHHHHHHHHHCBTTBE-EGGGHHHHH---TCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHC-CCHHH
T ss_pred hhhHHHHHHHHhccCCCCCC-cHHHHHHHH---CCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcC-CCHHH
Confidence 35688999999999988999 789998854 56666665555542 35789999999998876543 34568
Q ss_pred HHHHHHHhhcCCCCCcccHHHHHHHHH-hhccCCC------ChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 335 EVVDAFKAADTTKSGKLSFPDFLKVMH-THSKAED------IPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 335 ~~~~~f~~~D~d~~g~i~~~ef~~~~~-~~~~~~~------~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
.++.+|+.||.|++|+|+.+|+..++. .+..... ..++++.+|+.+|.|++|.|+++||..++..
T Consensus 99 ~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 170 (179)
T 3a8r_A 99 RLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQ 170 (179)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC-
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 899999999999999999999999997 5422102 4678999999999999999999999999865
No 202
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.55 E-value=7.7e-15 Score=149.83 Aligned_cols=147 Identities=16% Similarity=0.177 Sum_probs=115.8
Q ss_pred CCcccEEeccCC---CcCcc-cCCCCCCCEEEccCCCCCcCCc-CccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEE
Q psy2947 60 FSHAFLLSLSYT---PIGRR-IFKCDTVEVLSLKSNSLTSLPP-DIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHL 134 (441)
Q Consensus 60 l~~L~~l~l~~n---~i~~~-~~~l~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 134 (441)
+.+++.+++++| .+|.. +..+++|++|+|++|.++.+|+ .|+.+++|+.|+|++|.++ +..|..++.+++|++|
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCC-CCCHHHHcCCCCCCEE
Confidence 578899999999 45544 4678999999999999997766 6999999999999999998 5555567999999999
Q ss_pred EccCCCCCccchh-hcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhccc
Q psy2947 135 YLDNNLLDALPGF-LLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVI 212 (441)
Q Consensus 135 ~l~~n~l~~lp~~-~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l 212 (441)
+|++|.|+.+|.. |+.+++|++|++++|.+.. ..|..+..++.+..+ +.+|.+..+| +..++.|..+
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~---------~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L~~L 197 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLER---------IEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHA 197 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCB---------CCTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTCSEE
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCC---------CChhhhhcCCcCcEEECcCCCCCCcC--hhhhhhhhhh
Confidence 9999999999854 6899999999999999633 335567777777766 7777776665 3444555554
Q ss_pred cccccc
Q psy2947 213 ASKENF 218 (441)
Q Consensus 213 ~l~~n~ 218 (441)
++++|.
T Consensus 198 ~l~~n~ 203 (597)
T 3oja_B 198 NVSYNL 203 (597)
T ss_dssp ECCSSC
T ss_pred hcccCc
Confidence 444443
No 203
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.55 E-value=7.6e-15 Score=149.04 Aligned_cols=179 Identities=13% Similarity=0.125 Sum_probs=96.4
Q ss_pred CCCcccEEeccCCCc------CcccCCCCCCCEEEccCCCCCcCCcCccC-------------------------CCCCc
Q psy2947 59 YFSHAFLLSLSYTPI------GRRIFKCDTVEVLSLKSNSLTSLPPDIGR-------------------------LTNLR 107 (441)
Q Consensus 59 ~l~~L~~l~l~~n~i------~~~~~~l~~L~~L~l~~n~l~~lp~~~~~-------------------------l~~L~ 107 (441)
.+++|+.|++++|.+ |..+..+++|++|++++|.++.+|..+.. +++|+
T Consensus 345 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 424 (570)
T 2z63_A 345 DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 424 (570)
T ss_dssp BCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCC
T ss_pred cCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCC
Confidence 355666666666533 22334455555555555555544444444 44455
Q ss_pred EEEccCCcCCCCCCchhhhcCCCCCEEEccCCCCC--ccchhhcCCCCCCEEEccCCcCccCcccccccccccccccccc
Q psy2947 108 VLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLD--ALPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTS 185 (441)
Q Consensus 108 ~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~--~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~ 185 (441)
.|++++|.+. +..|..+..+++|++|++++|.+. .+|..+..+++|+.|++++|++ ....|..+..++
T Consensus 425 ~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l---------~~~~~~~~~~l~ 494 (570)
T 2z63_A 425 YLDISHTHTR-VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL---------EQLSPTAFNSLS 494 (570)
T ss_dssp EEECTTSCCE-ECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC---------CEECTTTTTTCT
T ss_pred EEeCcCCccc-ccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCcc---------ccCChhhhhccc
Confidence 5555555444 333444445555555555555543 3444455555555555555542 223356666777
Q ss_pred hhHHH-HhhcccccCCc-hhhhhhhhcccccccccCCCCCCCchhh-hHHHhhhcCCcccccccC
Q psy2947 186 TRDEV-LRKQKKLHQPS-RLQDLAVQSVIASKENFFEPGLFPGPLV-DYIAREYNQYHVCHYCNS 247 (441)
Q Consensus 186 ~~~~~-l~~~~~~~~p~-~l~~l~~l~~l~l~~n~~~~~~~p~~~~-~~l~~~~~~~~~~~~~~~ 247 (441)
.+..+ +++|.+..+|+ .+..++.|+.+++++|++.+..-..... .|+.........-+.|..
T Consensus 495 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~~~~~~~~C~~ 559 (570)
T 2z63_A 495 SLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSAKCSG 559 (570)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGEESCCBBTT
T ss_pred CCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhccccCCCchhhCC
Confidence 77666 77777766654 4677888888888888887643223333 666554333333334543
No 204
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.55 E-value=7e-15 Score=145.09 Aligned_cols=155 Identities=16% Similarity=0.181 Sum_probs=124.2
Q ss_pred CCCCEEEccCCCCCc-CCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEccCCCCCcc-chhhcCCCCCCEEE
Q psy2947 81 DTVEVLSLKSNSLTS-LPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLDAL-PGFLLSMPQLDTVY 158 (441)
Q Consensus 81 ~~L~~L~l~~n~l~~-lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~l-p~~~~~l~~L~~L~ 158 (441)
++|+.|++++|.++. +|..+..+++|+.|++++|.++ +..|..+..+++|++|++++|.++.+ |..+..+++|+.|+
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 353 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEIN-KIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLD 353 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEE
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCccc-ccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEE
Confidence 579999999999995 4566999999999999999998 55567889999999999999999887 47889999999999
Q ss_pred ccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCch-hhhhhhhcccccccccCCCCCCC--chhhhHHHh
Q psy2947 159 RHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSR-LQDLAVQSVIASKENFFEPGLFP--GPLVDYIAR 234 (441)
Q Consensus 159 l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~-l~~l~~l~~l~l~~n~~~~~~~p--~~~~~~l~~ 234 (441)
+++|.+. ...|..+..++.+..+ +++|.+..+|.. +..++.|+.+++++|++.+. .| ..+..|+..
T Consensus 354 Ls~N~l~---------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~-~~~~~~l~~~l~~ 423 (455)
T 3v47_A 354 LSYNHIR---------ALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS-CPRIDYLSRWLNK 423 (455)
T ss_dssp CCSSCCC---------EECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-TTTTHHHHHHHHH
T ss_pred CCCCccc---------ccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccC-CCcchHHHHHHHh
Confidence 9999952 3346778888888888 899999888864 58899999999999999864 44 345567765
Q ss_pred hhcCCccccccc
Q psy2947 235 EYNQYHVCHYCN 246 (441)
Q Consensus 235 ~~~~~~~~~~~~ 246 (441)
..........|.
T Consensus 424 ~~~~~~~~~~c~ 435 (455)
T 3v47_A 424 NSQKEQGSAKCS 435 (455)
T ss_dssp TTTTEESCCBBT
T ss_pred Cccceeeeeeec
Confidence 543333333343
No 205
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.55 E-value=2.4e-15 Score=140.86 Aligned_cols=161 Identities=14% Similarity=0.054 Sum_probs=109.7
Q ss_pred CCCcccEEeccCCC----cCccc--CCCCCCCEEEccCCCCCcCCcCccCC-----CCCcEEEccCCcCCCCCCchhhhc
Q psy2947 59 YFSHAFLLSLSYTP----IGRRI--FKCDTVEVLSLKSNSLTSLPPDIGRL-----TNLRVLCLTDNCLQNASIPFTLTF 127 (441)
Q Consensus 59 ~l~~L~~l~l~~n~----i~~~~--~~l~~L~~L~l~~n~l~~lp~~~~~l-----~~L~~L~l~~n~l~~~~~p~~~~~ 127 (441)
.+++|+.|++++|. +|..+ ..+++|++|+|++|+++.+|..+..+ ++|++|++++|+++ +..|..++.
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~-~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSL-NFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCC-CCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCc-cchHHHhcc
Confidence 36788888888883 45544 67888888888888888777666666 88888888888887 444467788
Q ss_pred CCCCCEEEccCCCCCc---cchhh--cCCCCCCEEEccCCcCccCcccccccccccc-cccccchhHHH-HhhcccccCC
Q psy2947 128 CKNLTHLYLDNNLLDA---LPGFL--LSMPQLDTVYRHGNHNYFKSTFMWYHSDIHA-RIRSTSTRDEV-LRKQKKLHQP 200 (441)
Q Consensus 128 l~~L~~L~l~~n~l~~---lp~~~--~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~-~l~~l~~~~~~-l~~~~~~~~p 200 (441)
+++|++|++++|++.. +|..+ ..+++|++|++++|.+.... .++. .+..++.+..+ +++|.+...+
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~-------~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 244 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPS-------GVCSALAAARVQLQGLDLSHNSLRDAA 244 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHH-------HHHHHHHHTTCCCSEEECTTSCCCSSC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchH-------HHHHHHHhcCCCCCEEECCCCcCCccc
Confidence 8888888888888643 34344 77888888888888864211 1221 22344455555 6677775543
Q ss_pred --chhhhhhhhcccccccccCCCCCCCchhh
Q psy2947 201 --SRLQDLAVQSVIASKENFFEPGLFPGPLV 229 (441)
Q Consensus 201 --~~l~~l~~l~~l~l~~n~~~~~~~p~~~~ 229 (441)
+.+..++.|+.|++++|.+. .+|..+.
T Consensus 245 ~~~~~~~l~~L~~L~Ls~N~l~--~ip~~~~ 273 (312)
T 1wwl_A 245 GAPSCDWPSQLNSLNLSFTGLK--QVPKGLP 273 (312)
T ss_dssp CCSCCCCCTTCCEEECTTSCCS--SCCSSCC
T ss_pred chhhhhhcCCCCEEECCCCccC--hhhhhcc
Confidence 34555677888888887765 3666544
No 206
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.54 E-value=5.8e-14 Score=125.19 Aligned_cols=111 Identities=28% Similarity=0.333 Sum_probs=99.5
Q ss_pred CCCCCcccEEeccCCCc---Cc-ccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCchhhhcCCCC
Q psy2947 57 PQYFSHAFLLSLSYTPI---GR-RIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPFTLTFCKNL 131 (441)
Q Consensus 57 ~~~l~~L~~l~l~~n~i---~~-~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L 131 (441)
+..+++|+.|+|++|.| |. .+..+++|++|+|++|+|+.+|.. |..+++|+.|++++|+++ .+|..+..+++|
T Consensus 60 ~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~--~lp~~~~~l~~L 137 (229)
T 3e6j_A 60 FDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT--ELPRGIERLTHL 137 (229)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC--SCCTTGGGCTTC
T ss_pred hhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc--ccCcccccCCCC
Confidence 34688999999999954 43 357899999999999999988877 789999999999999998 899999999999
Q ss_pred CEEEccCCCCCccc-hhhcCCCCCCEEEccCCcCccCcc
Q psy2947 132 THLYLDNNLLDALP-GFLLSMPQLDTVYRHGNHNYFKST 169 (441)
Q Consensus 132 ~~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~~~~~ 169 (441)
++|+|++|+|+.+| ..+..+++|+.|++++|++.+.|.
T Consensus 138 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 138 THLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 99999999999988 568889999999999999988773
No 207
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=99.54 E-value=4.5e-14 Score=121.92 Aligned_cols=123 Identities=17% Similarity=0.193 Sum_probs=106.3
Q ss_pred CCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCC-CCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcc
Q psy2947 310 KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTT-KSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTV 388 (441)
Q Consensus 310 ~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d-~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~i 388 (441)
+.+.++.+++..+.... ..+.++++.+|+.||.+ ++|.|+++||..++..........+.++.+|+.+|.+++|.|
T Consensus 4 ~~~~l~~~~l~~l~~~~---~~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i 80 (190)
T 1fpw_A 4 KTSKLSKDDLTCLKQST---YFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFI 80 (190)
T ss_dssp CSCCSTTHHHHHHTTTC---CSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEE
T ss_pred ccCCCCHHHHHHHHHhc---CCCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcE
Confidence 45567777777766532 45788999999999998 899999999999998874433446779999999999999999
Q ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 389 PAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 389 s~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+++||..++...+...+.++++.+|+.+|.|++|.|+++||..++..
T Consensus 81 ~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~ 127 (190)
T 1fpw_A 81 HFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127 (190)
T ss_dssp CHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred eHHHHHHHHHHHccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 99999999999988888999999999999999999999999998865
No 208
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=3.2e-14 Score=121.43 Aligned_cols=102 Identities=23% Similarity=0.162 Sum_probs=86.7
Q ss_pred CCcccEEeccCCCcC--cccCCCC-CCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhh-hcCCCCCEEE
Q psy2947 60 FSHAFLLSLSYTPIG--RRIFKCD-TVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTL-TFCKNLTHLY 135 (441)
Q Consensus 60 l~~L~~l~l~~n~i~--~~~~~l~-~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~-~~l~~L~~L~ 135 (441)
+.+|+.|++++|.+. +.+..+. +|++|++++|.++.+ +.+..+++|++|++++|.++ .+|..+ ..+++|++|+
T Consensus 18 ~~~L~~L~l~~n~l~~i~~~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRIC--RIGEGLDQALPDLTELI 94 (176)
T ss_dssp TTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCC--EECSCHHHHCTTCCEEE
T ss_pred cCCceEEEeeCCCCchhHHhhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCccc--ccCcchhhcCCCCCEEE
Confidence 578899999999554 2244444 899999999999987 67899999999999999998 677655 8999999999
Q ss_pred ccCCCCCccch--hhcCCCCCCEEEccCCcC
Q psy2947 136 LDNNLLDALPG--FLLSMPQLDTVYRHGNHN 164 (441)
Q Consensus 136 l~~n~l~~lp~--~~~~l~~L~~L~l~~N~~ 164 (441)
+++|+|+.+|. .+..+++|+.|++++|++
T Consensus 95 L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i 125 (176)
T 1a9n_A 95 LTNNSLVELGDLDPLASLKSLTYLCILRNPV 125 (176)
T ss_dssp CCSCCCCCGGGGGGGGGCTTCCEEECCSSGG
T ss_pred CCCCcCCcchhhHhhhcCCCCCEEEecCCCC
Confidence 99999999986 788999999999999995
No 209
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.53 E-value=4.6e-15 Score=151.90 Aligned_cols=152 Identities=15% Similarity=0.126 Sum_probs=95.1
Q ss_pred CCCcccEEeccCCCc------CcccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCc-hhhhcCCCC
Q psy2947 59 YFSHAFLLSLSYTPI------GRRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIP-FTLTFCKNL 131 (441)
Q Consensus 59 ~l~~L~~l~l~~n~i------~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p-~~~~~l~~L 131 (441)
.+++|+.|++++|.+ |..+..+++|++|++++|.++.+|..+..+++|+.|++++|.+. +..| ..+..+++|
T Consensus 348 ~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~~l~~L 426 (606)
T 3vq2_A 348 ALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLK-RVTEFSAFLSLEKL 426 (606)
T ss_dssp CCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEE-STTTTTTTTTCTTC
T ss_pred cCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccC-CccChhhhhccccC
Confidence 467788888888743 45566777788888888777777766777777777777777776 3444 356777777
Q ss_pred CEEEccCCCCCc-cchhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccC-Cchhhhhhh
Q psy2947 132 THLYLDNNLLDA-LPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQ-PSRLQDLAV 208 (441)
Q Consensus 132 ~~L~l~~n~l~~-lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~-p~~l~~l~~ 208 (441)
++|++++|.+.. +|..+..+++|+.|++++|.+.. ..+|..+..++.+..+ +++|.+..+ |..+..++.
T Consensus 427 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 498 (606)
T 3vq2_A 427 LYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKD--------NTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHR 498 (606)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGG--------GEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred CEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCC--------cchHHhhccCCCCCEEECCCCcCCccChhhhccccc
Confidence 777777777754 45666777777777777776421 0123444444444444 444444332 333445555
Q ss_pred hcccccccccC
Q psy2947 209 QSVIASKENFF 219 (441)
Q Consensus 209 l~~l~l~~n~~ 219 (441)
|+.|++++|.+
T Consensus 499 L~~L~Ls~N~l 509 (606)
T 3vq2_A 499 LQLLNMSHNNL 509 (606)
T ss_dssp CCEEECCSSCC
T ss_pred CCEEECCCCcC
Confidence 55555555543
No 210
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.53 E-value=1e-14 Score=145.46 Aligned_cols=137 Identities=18% Similarity=0.238 Sum_probs=114.7
Q ss_pred cccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCC--------CcCHHHHHHHHH----hCCCcccHHHHHHHHHhh
Q psy2947 261 FKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGM--------SPTIAELKKYLA----EKGGKLSFPDFLKVMHTH 326 (441)
Q Consensus 261 ~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~--------~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~ 326 (441)
++.++.+++++|..+|.+ |.| +.+|+..+++.++. .++..++..++. +++|.|+++||..++...
T Consensus 341 ~~~~~~~l~~~F~~~D~d~dG~I-~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~ 419 (494)
T 3lij_A 341 SQEETKELTDIFRHIDKNGDGQL-DRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDR 419 (494)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEE-CHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCH
T ss_pred cHHHHHHHHHHHHHhCcCCCCeE-cHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhh
Confidence 678889999999999986 888 89999999988753 344666666664 789999999999998644
Q ss_pred cCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCC
Q psy2947 327 SKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGE 402 (441)
Q Consensus 327 ~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~ 402 (441)
......+.+..+|+.||.|++|.|+.+||..++.. ....+++++.+|+.+|.|+||.|+++||.++|+.++.
T Consensus 420 -~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~---~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~ 491 (494)
T 3lij_A 420 -KSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL---DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLCS 491 (494)
T ss_dssp -HHHTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C---CSCCCHHHHHHHHTTCSSSSSSEEHHHHHHHHHHHSS
T ss_pred -hccccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh---cCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhhcc
Confidence 22345788999999999999999999999998865 3445688999999999999999999999999998763
No 211
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.53 E-value=2.9e-14 Score=136.24 Aligned_cols=160 Identities=23% Similarity=0.266 Sum_probs=128.7
Q ss_pred CccCCCCccCCCCCCCCCCcccEEeccCC---CcCcccCCCCCCCEEEccCCCCCcCCcC-cc-CCCCCcEEEccCCcCC
Q psy2947 43 CSLEVGGICSHIWIPQYFSHAFLLSLSYT---PIGRRIFKCDTVEVLSLKSNSLTSLPPD-IG-RLTNLRVLCLTDNCLQ 117 (441)
Q Consensus 43 c~~~~~~~c~~~~~~~~l~~L~~l~l~~n---~i~~~~~~l~~L~~L~l~~n~l~~lp~~-~~-~l~~L~~L~l~~n~l~ 117 (441)
..|...-.|. -+.++++++ .||..+. +.++.|+|++|+|+.++.. +. .+++|+.|+|++|+|+
T Consensus 10 ~~Cp~~C~C~----------~~~l~c~~~~l~~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~ 77 (361)
T 2xot_A 10 VSCPANCLCA----------SNILSCSKQQLPNVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN 77 (361)
T ss_dssp TTCCTTCEEE----------TTEEECCSSCCSSCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCC
T ss_pred CCCCCCCEEC----------CCEEEeCCCCcCccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCC
Confidence 4566555564 257888888 4565544 4689999999999988776 66 8999999999999998
Q ss_pred CCCCc-hhhhcCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-Hhhc
Q psy2947 118 NASIP-FTLTFCKNLTHLYLDNNLLDALP-GFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQ 194 (441)
Q Consensus 118 ~~~~p-~~~~~l~~L~~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~ 194 (441)
.++ ..+..+++|++|+|++|+|+.+| ..|..+++|+.|+|++|.+.. ..|..+..++.+..+ +++|
T Consensus 78 --~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~---------~~~~~~~~l~~L~~L~L~~N 146 (361)
T 2xot_A 78 --FISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVV---------VDRNAFEDMAQLQKLYLSQN 146 (361)
T ss_dssp --EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE---------ECTTTTTTCTTCCEEECCSS
T ss_pred --ccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccE---------ECHHHhCCcccCCEEECCCC
Confidence 555 56899999999999999999887 568899999999999999643 235667778888878 8999
Q ss_pred ccccCCchh----hhhhhhcccccccccCCCCCCCch
Q psy2947 195 KKLHQPSRL----QDLAVQSVIASKENFFEPGLFPGP 227 (441)
Q Consensus 195 ~~~~~p~~l----~~l~~l~~l~l~~n~~~~~~~p~~ 227 (441)
.+..+|..+ ..++.|+.|++++|.+.. +|..
T Consensus 147 ~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~--l~~~ 181 (361)
T 2xot_A 147 QISRFPVELIKDGNKLPKLMLLDLSSNKLKK--LPLT 181 (361)
T ss_dssp CCCSCCGGGTC----CTTCCEEECCSSCCCC--CCHH
T ss_pred cCCeeCHHHhcCcccCCcCCEEECCCCCCCc--cCHH
Confidence 999999766 579999999999998874 6643
No 212
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=99.53 E-value=9.8e-15 Score=118.18 Aligned_cols=124 Identities=15% Similarity=0.201 Sum_probs=102.9
Q ss_pred HHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcC--CCCCHHHHHHH
Q psy2947 268 FRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSK--AEDIPKEVVDA 339 (441)
Q Consensus 268 l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~--~~~~~~~~~~~ 339 (441)
++++|..+|.+ |.| +.+|+..+++.++..++..++..++. +++|.|+++||..++..... .....++++.+
T Consensus 2 l~~~F~~~D~~~~g~i-~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~ 80 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAV-SYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVL 80 (134)
T ss_dssp HHHHHHHHCTTCSSEE-EHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcC-CHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHH
Confidence 57789899976 888 89999999999998888888877775 68999999999999853211 11234669999
Q ss_pred HHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHH
Q psy2947 340 FKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVL 397 (441)
Q Consensus 340 f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l 397 (441)
|+.+|.|++|.|+.+||..++..... ..+..+|+.+|.+++|.|+++||.+++
T Consensus 81 f~~~D~d~~G~i~~~e~~~~l~~~~~-----~~~~~~~~~~D~~~dg~i~~~ef~~~l 133 (134)
T 1jfj_A 81 YKLMDVDGDGKLTKEEVTSFFKKHGI-----EKVAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHHCCSSSSEEEHHHHHHHHTTTTC-----HHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred HHHHCCCCCCccCHHHHHHHHHHhCH-----HHHHHHHHHhCCCCCCcEeHHHHHHHh
Confidence 99999999999999999999986521 128899999999999999999999876
No 213
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=99.53 E-value=1.2e-14 Score=129.30 Aligned_cols=140 Identities=16% Similarity=0.072 Sum_probs=107.2
Q ss_pred eecccchHHHHHhhhccccC--CCccCHHHHHH-HHHHcCCCcC----HHHHHHH---------HHhCCCcccHHHHHHH
Q psy2947 259 FTFKTPYLEFRECFFLFARN--GTIKTLDELSV-IMRSLGMSPT----IAELKKY---------LAEKGGKLSFPDFLKV 322 (441)
Q Consensus 259 ~l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~-~~~~~~~~~~----~~~~~~~---------~~~~~g~i~~~ef~~~ 322 (441)
.++..++..++++|..+|.+ |.| +.+|+.. +++.++..++ ...+..+ +.+++|.|+++||..+
T Consensus 44 ~ls~~~~~~l~~~F~~~D~d~dG~I-s~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~ 122 (226)
T 2lvv_A 44 DKDAESKSRRIELFKQFDTNGTGKL-GFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEF 122 (226)
T ss_dssp SCCHHHHHHHHHHHHHHGGGSCSCB-CSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHH
T ss_pred hCCHHHHHHHHHHHHHHCCCCCCcC-cHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHH
Confidence 45677899999999999975 889 8999998 5666565443 3334444 5788999999999995
Q ss_pred HHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 323 MHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 323 ~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
+..... ....+.+..+|+.||.|++|+|+.+||+.++..+........++..+|+.+|.|++|.|+++||..+|...
T Consensus 123 ~~~~~~-~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~~~~~~D~d~dG~Is~~EF~~~~~~~ 199 (226)
T 2lvv_A 123 RLMLCY-IYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDEFSCWAVTK 199 (226)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCHHHHHHHCCSCSSCEEHHHHHHHHHHH
T ss_pred HHHHHh-ccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhc
Confidence 332111 11246899999999999999999999999998652111112348899999999999999999999999763
No 214
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.53 E-value=9.6e-15 Score=131.20 Aligned_cols=156 Identities=16% Similarity=0.199 Sum_probs=126.0
Q ss_pred CCCCCcccEEeccCCC-c---Cc-ccCCCCCCCEEEccC-CCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCchhhhcCC
Q psy2947 57 PQYFSHAFLLSLSYTP-I---GR-RIFKCDTVEVLSLKS-NSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPFTLTFCK 129 (441)
Q Consensus 57 ~~~l~~L~~l~l~~n~-i---~~-~~~~l~~L~~L~l~~-n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~ 129 (441)
+..+++|+.|++++|. + +. .+..+++|++|++++ |+++.+|+. |..+++|++|++++|.++ .+|. +..++
T Consensus 51 ~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~--~lp~-~~~l~ 127 (239)
T 2xwt_C 51 FSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLK--MFPD-LTKVY 127 (239)
T ss_dssp TTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCC--SCCC-CTTCC
T ss_pred ccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCc--cccc-ccccc
Confidence 3458999999999995 5 33 567899999999998 999988865 899999999999999998 6887 88888
Q ss_pred CCC---EEEccCC-CCCccc-hhhcCCCCCC-EEEccCCcCccCcccccccccccccccccchhHHH-Hhhcc-cccCC-
Q psy2947 130 NLT---HLYLDNN-LLDALP-GFLLSMPQLD-TVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQK-KLHQP- 200 (441)
Q Consensus 130 ~L~---~L~l~~n-~l~~lp-~~~~~l~~L~-~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~-~~~~p- 200 (441)
+|+ +|++++| .++.+| ..|..+++|+ .|++++|.+.. +|......+.+..+ +.+|. +..+|
T Consensus 128 ~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~----------i~~~~~~~~~L~~L~L~~n~~l~~i~~ 197 (239)
T 2xwt_C 128 STDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTS----------VQGYAFNGTKLDAVYLNKNKYLTVIDK 197 (239)
T ss_dssp BCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCE----------ECTTTTTTCEEEEEECTTCTTCCEECT
T ss_pred ccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcc----------cCHhhcCCCCCCEEEcCCCCCcccCCH
Confidence 888 9999999 999998 5688999999 99999999643 33322222445555 77784 77775
Q ss_pred chhhhh-hhhcccccccccCCCCCCCch
Q psy2947 201 SRLQDL-AVQSVIASKENFFEPGLFPGP 227 (441)
Q Consensus 201 ~~l~~l-~~l~~l~l~~n~~~~~~~p~~ 227 (441)
..+..+ +.|+.+++++|.+.. +|..
T Consensus 198 ~~~~~l~~~L~~L~l~~N~l~~--l~~~ 223 (239)
T 2xwt_C 198 DAFGGVYSGPSLLDVSQTSVTA--LPSK 223 (239)
T ss_dssp TTTTTCSBCCSEEECTTCCCCC--CCCT
T ss_pred HHhhccccCCcEEECCCCcccc--CChh
Confidence 457888 999999999998764 6654
No 215
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.53 E-value=1.8e-14 Score=143.41 Aligned_cols=136 Identities=19% Similarity=0.310 Sum_probs=109.3
Q ss_pred cccchHHHHHhhhccccC--CCccCHHHHHH----HHHHcCCCcC-------HHHHHHHHH----hCCCcccHHHHHHHH
Q psy2947 261 FKTPYLEFRECFFLFARN--GTIKTLDELSV----IMRSLGMSPT-------IAELKKYLA----EKGGKLSFPDFLKVM 323 (441)
Q Consensus 261 ~~~~~~~l~~~f~~~d~~--G~i~~~~el~~----~~~~~~~~~~-------~~~~~~~~~----~~~g~i~~~ef~~~~ 323 (441)
++++..++++.|..+|.+ |.| +.+|+.. +++.++..++ ..++..++. +++|.|+++||..++
T Consensus 330 ~~~~~~~l~~~F~~~D~d~dG~I-~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~ 408 (484)
T 3nyv_A 330 SQDETKELTAIFHKMDKNGDGQL-DRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVA 408 (484)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSEE-EHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcCCCceE-eHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence 567888999999999986 788 8999944 4444566666 566666664 689999999999988
Q ss_pred HhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhC
Q psy2947 324 HTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWG 401 (441)
Q Consensus 324 ~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~ 401 (441)
.... .....+.++.+|+.||.|++|.|+.+||..++.. ....+++++.+|+.+|.|+||.|+++||.++|..+.
T Consensus 409 ~~~~-~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~---~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~~ 482 (484)
T 3nyv_A 409 MDRK-TLLSRERLERAFRMFDSDNSGKISSTELATIFGV---SDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKLC 482 (484)
T ss_dssp HHHH-HHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH---TTCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTT
T ss_pred Hhcc-ccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh---cCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHhhh
Confidence 7552 2234578999999999999999999999999876 344578899999999999999999999999998753
No 216
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.53 E-value=2.1e-15 Score=141.59 Aligned_cols=137 Identities=20% Similarity=0.150 Sum_probs=84.6
Q ss_pred CCCCCEEEccCCCCCcCCc-CccCCCCCcEEEccCCcCCCCCCchhh-hcCCCCCEEEccCCCCCccchhhcCCCCCCEE
Q psy2947 80 CDTVEVLSLKSNSLTSLPP-DIGRLTNLRVLCLTDNCLQNASIPFTL-TFCKNLTHLYLDNNLLDALPGFLLSMPQLDTV 157 (441)
Q Consensus 80 l~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~l~~n~l~~~~~p~~~-~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L 157 (441)
+++|+.|++++|+++.+++ .+..+++|+.|++++|.++ +..|..+ ..+++|++|++++|.|+.+|.. ..+++|+.|
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~l~~L~~L 196 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID-TVNFAELAASSDTLEHLNLQYNFIYDVKGQ-VVFAKLKTL 196 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCC-EEEGGGGGGGTTTCCEEECTTSCCCEEECC-CCCTTCCEE
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCC-cccHHHHhhccCcCCEEECCCCcCcccccc-cccccCCEE
Confidence 4556666666666665443 3666666666666666665 3333344 3566666666666666666532 236666666
Q ss_pred EccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhcccccccccCCCCCCCchh
Q psy2947 158 YRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIASKENFFEPGLFPGPL 228 (441)
Q Consensus 158 ~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~l~~n~~~~~~~p~~~ 228 (441)
++++|.+. .+|..+..++.+..+ +++|.+..+|..+..++.|+.+++++|++.++.+|..+
T Consensus 197 ~Ls~N~l~----------~l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~ 258 (317)
T 3o53_A 197 DLSSNKLA----------FMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTLRDFF 258 (317)
T ss_dssp ECCSSCCC----------EECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHHHHHHHH
T ss_pred ECCCCcCC----------cchhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccCcCHHHHH
Confidence 66666642 234446666666666 77777777777777777888888888877644444443
No 217
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=99.53 E-value=1.1e-13 Score=125.71 Aligned_cols=138 Identities=15% Similarity=0.185 Sum_probs=111.8
Q ss_pred ecccchHHHHHhhhccccCCCccCHHHHHHHHHHcC-CCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCCCHH
Q psy2947 260 TFKTPYLEFRECFFLFARNGTIKTLDELSVIMRSLG-MSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIPK 334 (441)
Q Consensus 260 l~~~~~~~l~~~f~~~d~~G~i~~~~el~~~~~~~~-~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~~~~ 334 (441)
++..++..+.+.|...+.+|.| +.+++..++..++ ......++..++. +++|.|+++||..++..... ....+
T Consensus 88 ~s~~ei~~l~~~fd~~~~~G~I-~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~-~~~~~ 165 (256)
T 2jul_A 88 FTKKELQSLYRGFKNECPTGLV-DEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLR-GTVHE 165 (256)
T ss_dssp SCHHHHHHHHHHHHHHCTTSSE-EHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHS-CCHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCcC-CHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhc-cChHH
Confidence 3456666666666554567999 8999999999886 3456666777665 68999999999999987643 35678
Q ss_pred HHHHHHHhhcCCCCCcccHHHHHHHHHhhc---c--------CCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 335 EVVDAFKAADTTKSGKLSFPDFLKVMHTHS---K--------AEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 335 ~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~---~--------~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
.++.+|+.+|.|++|.|+++||..++.... + .....+.+..+|+.+|.|++|.|+++||+.++..
T Consensus 166 ~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~ 241 (256)
T 2jul_A 166 KLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQK 241 (256)
T ss_dssp HHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 899999999999999999999999987652 1 2234678999999999999999999999999986
No 218
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.52 E-value=2.4e-14 Score=143.79 Aligned_cols=152 Identities=20% Similarity=0.136 Sum_probs=118.8
Q ss_pred cccEEeccCCCcCccc--CCCCCCCEEEccCCCCCc-CCcCccCCCCCcEEEccCCcCCCC--CCchhhhcCCCCCEEEc
Q psy2947 62 HAFLLSLSYTPIGRRI--FKCDTVEVLSLKSNSLTS-LPPDIGRLTNLRVLCLTDNCLQNA--SIPFTLTFCKNLTHLYL 136 (441)
Q Consensus 62 ~L~~l~l~~n~i~~~~--~~l~~L~~L~l~~n~l~~-lp~~~~~l~~L~~L~l~~n~l~~~--~~p~~~~~l~~L~~L~l 136 (441)
+|+.|++++|.+.... ..+++|++|++++|+++. +|..+..+++|+.|++++|+++ + .+|..+..+++|++|++
T Consensus 303 ~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~l~~L~~L~L 381 (520)
T 2z7x_B 303 NIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLK-ELSKIAEMTTQMKSLQQLDI 381 (520)
T ss_dssp CCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCC-BHHHHHHHHTTCTTCCEEEC
T ss_pred ceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccC-ccccchHHHhhCCCCCEEEC
Confidence 3566666666554333 578899999999999994 7888999999999999999997 3 34567889999999999
Q ss_pred cCCCCCc-cch-hhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhcccc
Q psy2947 137 DNNLLDA-LPG-FLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIA 213 (441)
Q Consensus 137 ~~n~l~~-lp~-~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~ 213 (441)
++|.++. +|. .+..+++|+.|++++|++. +.+|..+. +.+..+ +++|.+..+|..+..++.|+.++
T Consensus 382 s~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~---------~~~~~~l~--~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ 450 (520)
T 2z7x_B 382 SQNSVSYDEKKGDCSWTKSLLSLNMSSNILT---------DTIFRCLP--PRIKVLDLHSNKIKSIPKQVVKLEALQELN 450 (520)
T ss_dssp CSSCCBCCGGGCSCCCCTTCCEEECCSSCCC---------GGGGGSCC--TTCCEEECCSSCCCCCCGGGGGCTTCCEEE
T ss_pred CCCcCCcccccchhccCccCCEEECcCCCCC---------cchhhhhc--ccCCEEECCCCcccccchhhhcCCCCCEEE
Confidence 9999977 885 4778899999999999853 22333332 334444 77888899999899999999999
Q ss_pred cccccCCCCCCCch
Q psy2947 214 SKENFFEPGLFPGP 227 (441)
Q Consensus 214 l~~n~~~~~~~p~~ 227 (441)
+++|.+.. +|..
T Consensus 451 L~~N~l~~--l~~~ 462 (520)
T 2z7x_B 451 VASNQLKS--VPDG 462 (520)
T ss_dssp CCSSCCCC--CCTT
T ss_pred CCCCcCCc--cCHH
Confidence 99998774 7765
No 219
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=99.52 E-value=2.1e-15 Score=117.62 Aligned_cols=100 Identities=17% Similarity=0.299 Sum_probs=87.8
Q ss_pred CCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh---CCCCCH
Q psy2947 330 EDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW---GEGLSS 406 (441)
Q Consensus 330 ~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~---~~~l~~ 406 (441)
..+.+++..+|+.+| ++|.|+++||..++... ....+.++.+|+.+|.+++|+|+.+||+.++..+ |..+++
T Consensus 5 ~~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~ 79 (108)
T 2kyc_A 5 ILSPSDIAAALRDCQ--APDSFSPKKFFQISGMS---KKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTA 79 (108)
T ss_dssp SSCHHHHHHHHTTSC--STTTCCHHHHHHHHTCT---TCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCCT
T ss_pred cCCHHHHHHHHHHcC--CCCcCCHHHHHHHHhhC---cccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCCH
Confidence 356778888888888 88999999999988532 2334678899999999999999999999999998 788999
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 407 KEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 407 ~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
++++.+++.+|.|++|.|+|+||+.++.
T Consensus 80 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 80 SETKTFLAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp TTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence 9999999999999999999999999875
No 220
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.52 E-value=3.5e-15 Score=148.32 Aligned_cols=137 Identities=20% Similarity=0.147 Sum_probs=97.8
Q ss_pred CCCCCEEEccCCCCCcC-CcCccCCCCCcEEEccCCcCCCCCCchhhh-cCCCCCEEEccCCCCCccchhhcCCCCCCEE
Q psy2947 80 CDTVEVLSLKSNSLTSL-PPDIGRLTNLRVLCLTDNCLQNASIPFTLT-FCKNLTHLYLDNNLLDALPGFLLSMPQLDTV 157 (441)
Q Consensus 80 l~~L~~L~l~~n~l~~l-p~~~~~l~~L~~L~l~~n~l~~~~~p~~~~-~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L 157 (441)
+++|+.|+|++|.++.+ |..++.+++|+.|++++|.++ +..|..+. .+++|++|+|++|.|+.+|.. ..+++|+.|
T Consensus 119 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~-~~l~~L~~L 196 (487)
T 3oja_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID-TVNFAELAASSDTLEHLNLQYNFIYDVKGQ-VVFAKLKTL 196 (487)
T ss_dssp CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCC-EEEGGGGGGGTTTCCEEECTTSCCCEEECC-CCCTTCCEE
T ss_pred cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCC-CcChHHHhhhCCcccEEecCCCcccccccc-ccCCCCCEE
Confidence 45677777777777754 334777777777777777776 45555554 677777777777777766542 346777777
Q ss_pred EccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhcccccccccCCCCCCCchh
Q psy2947 158 YRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIASKENFFEPGLFPGPL 228 (441)
Q Consensus 158 ~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~l~~n~~~~~~~p~~~ 228 (441)
+|++|.+. .+|..+..++.+..+ +++|.+..+|..+..++.|..+++++|++.++.+|..+
T Consensus 197 ~Ls~N~l~----------~~~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~ 258 (487)
T 3oja_A 197 DLSSNKLA----------FMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTLRDFF 258 (487)
T ss_dssp ECCSSCCC----------EECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHHHHHHHH
T ss_pred ECCCCCCC----------CCCHhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCcchHHHH
Confidence 77777752 345557777777777 88888888898888889999999999988865555544
No 221
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=99.52 E-value=6.6e-15 Score=120.89 Aligned_cols=98 Identities=12% Similarity=0.110 Sum_probs=53.0
Q ss_pred HHHHHHhhcCCCCCcccHHHHHHHHHhhcc----CCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhC--------CC
Q psy2947 336 VVDAFKAADTTKSGKLSFPDFLKVMHTHSK----AEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWG--------EG 403 (441)
Q Consensus 336 ~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~----~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~--------~~ 403 (441)
...+|+.+|.|++|.|+++||..++..... .....+.++.+|+.+|.|++|+|+.+||+.++..++ ..
T Consensus 29 ~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~ 108 (143)
T 3a4u_B 29 SFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPL 108 (143)
T ss_dssp ----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------
T ss_pred CHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCC
Confidence 456788999999999999999988765532 112356788999999999999999999999998763 56
Q ss_pred CCHHHHHHHH----HHhCCCCCCceeHHHHHHHH
Q psy2947 404 LSSKEVDQIF----REANVTMNSKVRYEDFVKIA 433 (441)
Q Consensus 404 l~~~~~~~l~----~~~d~d~dg~i~~~ef~~~l 433 (441)
+++++++.++ +.+|.|+||.|+|+||+.+|
T Consensus 109 ~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 109 MSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred CCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 8888886555 99999999999999999775
No 222
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.52 E-value=5.2e-14 Score=144.02 Aligned_cols=165 Identities=18% Similarity=0.112 Sum_probs=98.5
Q ss_pred CCcccEEeccCCCc----C-cccCCCCCCCEEEccCCCCCcC-CcCccCCCCCcEEEccCCcCCCC-CC--chhhhcCCC
Q psy2947 60 FSHAFLLSLSYTPI----G-RRIFKCDTVEVLSLKSNSLTSL-PPDIGRLTNLRVLCLTDNCLQNA-SI--PFTLTFCKN 130 (441)
Q Consensus 60 l~~L~~l~l~~n~i----~-~~~~~l~~L~~L~l~~n~l~~l-p~~~~~l~~L~~L~l~~n~l~~~-~~--p~~~~~l~~ 130 (441)
+++|+.|++++|.+ | ..+..+++|+.|++++|.++.+ |..+..+++|++|++++|.++ + .+ +..+..+++
T Consensus 399 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~~~~l~~ 477 (606)
T 3t6q_A 399 CPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFP-KGNIQKTNSLQTLGR 477 (606)
T ss_dssp CTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCG-GGEECSSCGGGGCTT
T ss_pred CccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCC-ccccccchhhccCCC
Confidence 44455555555522 1 1244455555555555555533 333555666666666666554 2 11 234556666
Q ss_pred CCEEEccCCCCCcc-chhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCc-hhhhhh
Q psy2947 131 LTHLYLDNNLLDAL-PGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPS-RLQDLA 207 (441)
Q Consensus 131 L~~L~l~~n~l~~l-p~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~-~l~~l~ 207 (441)
|++|++++|+++.+ |..+..+++|+.|++++|++ .+..|..+..++.+ .+ +.+|.+..+|+ .+..++
T Consensus 478 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l---------~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~ 547 (606)
T 3t6q_A 478 LEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRL---------TSSSIEALSHLKGI-YLNLASNHISIILPSLLPILS 547 (606)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC---------CGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHH
T ss_pred ccEEECCCCccCccChhhhccccCCCEEECCCCcc---------CcCChhHhCccccc-EEECcCCcccccCHhhcccCC
Confidence 66666666666554 35566666666666666663 33456677777777 55 78888876654 578888
Q ss_pred hhcccccccccCCCCCCCchhhhHHHhh
Q psy2947 208 VQSVIASKENFFEPGLFPGPLVDYIARE 235 (441)
Q Consensus 208 ~l~~l~l~~n~~~~~~~p~~~~~~l~~~ 235 (441)
.|+.+++++|++.+.+--.++..|+...
T Consensus 548 ~L~~L~l~~N~~~c~c~~~~~~~w~~~~ 575 (606)
T 3t6q_A 548 QQRTINLRQNPLDCTCSNIYFLEWYKEN 575 (606)
T ss_dssp TSSEEECTTCCEECSGGGHHHHHHHHHC
T ss_pred CCCEEeCCCCCccccCCcHHHHHHHHhC
Confidence 9999999999888754444556666543
No 223
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.52 E-value=3.8e-14 Score=143.85 Aligned_cols=147 Identities=21% Similarity=0.244 Sum_probs=123.6
Q ss_pred CCCCcccEEeccCCCcC--cccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEE
Q psy2947 58 QYFSHAFLLSLSYTPIG--RRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLY 135 (441)
Q Consensus 58 ~~l~~L~~l~l~~n~i~--~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~ 135 (441)
..+++|+.|+|++|.|. ..+..+++|+.|+|++|.++.+| .+..+++|+.|+|++|.+. .+| .+..+++|+.|+
T Consensus 62 ~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~l~-~l~~l~~L~~L~Ls~N~l~--~l~-~l~~l~~L~~L~ 137 (605)
T 1m9s_A 62 QYLPNVTKLFLNGNKLTDIKPLTNLKNLGWLFLDENKIKDLS-SLKDLKKLKSLSLEHNGIS--DIN-GLVHLPQLESLY 137 (605)
T ss_dssp GGCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCCT-TSTTCTTCCEEECTTSCCC--CCG-GGGGCTTCSEEE
T ss_pred ccCCCCCEEEeeCCCCCCChhhccCCCCCEEECcCCCCCCCh-hhccCCCCCEEEecCCCCC--CCc-cccCCCccCEEE
Confidence 45889999999999543 12778999999999999999876 6899999999999999998 554 588999999999
Q ss_pred ccCCCCCccchhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhccccc
Q psy2947 136 LDNNLLDALPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIAS 214 (441)
Q Consensus 136 l~~n~l~~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~l 214 (441)
|++|.|+.+ ..+..+++|+.|+|++|.+... .| +..++.+..+ +++|.+..+| .+..+++|+.|++
T Consensus 138 Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~---------~~--l~~l~~L~~L~Ls~N~i~~l~-~l~~l~~L~~L~L 204 (605)
T 1m9s_A 138 LGNNKITDI-TVLSRLTKLDTLSLEDNQISDI---------VP--LAGLTKLQNLYLSKNHISDLR-ALAGLKNLDVLEL 204 (605)
T ss_dssp CCSSCCCCC-GGGGSCTTCSEEECCSSCCCCC---------GG--GTTCTTCCEEECCSSCCCBCG-GGTTCTTCSEEEC
T ss_pred CCCCccCCc-hhhcccCCCCEEECcCCcCCCc---------hh--hccCCCCCEEECcCCCCCCCh-HHccCCCCCEEEc
Confidence 999999888 5688999999999999996332 22 6667777777 8888888886 6899999999999
Q ss_pred ccccCCC
Q psy2947 215 KENFFEP 221 (441)
Q Consensus 215 ~~n~~~~ 221 (441)
++|++..
T Consensus 205 ~~N~l~~ 211 (605)
T 1m9s_A 205 FSQECLN 211 (605)
T ss_dssp CSEEEEC
T ss_pred cCCcCcC
Confidence 9998765
No 224
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.52 E-value=3.4e-14 Score=147.41 Aligned_cols=105 Identities=25% Similarity=0.234 Sum_probs=52.6
Q ss_pred CCCcccEEeccCCCc----CcccCCCCCCCEEEccCCCCC---cCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCC
Q psy2947 59 YFSHAFLLSLSYTPI----GRRIFKCDTVEVLSLKSNSLT---SLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNL 131 (441)
Q Consensus 59 ~l~~L~~l~l~~n~i----~~~~~~l~~L~~L~l~~n~l~---~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L 131 (441)
.+++|+.|++++|.+ +..+..+++|+.|++++|.++ .+|..|..+++|+.|++++|.++ +..|..+.++++|
T Consensus 428 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L 506 (680)
T 1ziw_A 428 GLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIA-NINDDMLEGLEKL 506 (680)
T ss_dssp TCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTC
T ss_pred CcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCC-cCChhhhcccccc
Confidence 456677777777632 233444555555555555543 33444555555555555555554 2222234555555
Q ss_pred CEEEccCCCCCccc---------hhhcCCCCCCEEEccCCcC
Q psy2947 132 THLYLDNNLLDALP---------GFLLSMPQLDTVYRHGNHN 164 (441)
Q Consensus 132 ~~L~l~~n~l~~lp---------~~~~~l~~L~~L~l~~N~~ 164 (441)
++|++++|+++.++ ..+.++++|+.|++++|.+
T Consensus 507 ~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l 548 (680)
T 1ziw_A 507 EILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGF 548 (680)
T ss_dssp CEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCC
T ss_pred CEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCC
Confidence 55555555554332 1134445555555555543
No 225
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.51 E-value=8.8e-14 Score=134.37 Aligned_cols=173 Identities=18% Similarity=0.160 Sum_probs=104.9
Q ss_pred CCCcccEEeccCCCc----CcccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCE
Q psy2947 59 YFSHAFLLSLSYTPI----GRRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTH 133 (441)
Q Consensus 59 ~l~~L~~l~l~~n~i----~~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~ 133 (441)
.+++|+.|++++|.+ |..+..+++|++|+|++|.++.+|.. |..+++|++|++++|.++ +..|..+..+++|++
T Consensus 91 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~ 169 (390)
T 3o6n_A 91 YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQN 169 (390)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTSSCTTCCE
T ss_pred CCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccC-ccChhhccCCCCCCE
Confidence 456666666666632 23345566666666666666666655 456666666666666665 233334555666666
Q ss_pred EEccCCCCCccc------------------------------------------------------------hhhcCCCC
Q psy2947 134 LYLDNNLLDALP------------------------------------------------------------GFLLSMPQ 153 (441)
Q Consensus 134 L~l~~n~l~~lp------------------------------------------------------------~~~~~l~~ 153 (441)
|++++|+++.++ ..+..+++
T Consensus 170 L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l~~ 249 (390)
T 3o6n_A 170 LQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPG 249 (390)
T ss_dssp EECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCCGGGGGCTT
T ss_pred EECCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCcccHHHcCCCC
Confidence 666666554332 12344566
Q ss_pred CCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhcccccccccCCCCCCCchhhhHH
Q psy2947 154 LDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIASKENFFEPGLFPGPLVDYI 232 (441)
Q Consensus 154 L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~l~~n~~~~~~~p~~~~~~l 232 (441)
|+.|++++|.+ ....|..+..++.+..+ +.+|.+..+|..+..++.|+.|++++|.+.. +|..+....
T Consensus 250 L~~L~Ls~n~l---------~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~l~ 318 (390)
T 3o6n_A 250 LVEVDLSYNEL---------EKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLLH--VERNQPQFD 318 (390)
T ss_dssp CSEEECCSSCC---------CEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSCCCC--CGGGHHHHT
T ss_pred ccEEECCCCcC---------CCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCccee--cCccccccC
Confidence 77777777764 23345667777777777 7778887777777778888888888887653 666655544
Q ss_pred HhhhcCCcccc
Q psy2947 233 AREYNQYHVCH 243 (441)
Q Consensus 233 ~~~~~~~~~~~ 243 (441)
......+..+.
T Consensus 319 ~L~~L~L~~N~ 329 (390)
T 3o6n_A 319 RLENLYLDHNS 329 (390)
T ss_dssp TCSEEECCSSC
T ss_pred cCCEEECCCCc
Confidence 44444444443
No 226
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.51 E-value=1.1e-14 Score=147.23 Aligned_cols=123 Identities=12% Similarity=0.165 Sum_probs=68.2
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCc
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGT 387 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~ 387 (441)
.+++|.|+++||..++.... ...+.++++.+|+.+|.|++|.|+++||..++..+.. +++++.+|+.||.+ +|+
T Consensus 22 ~d~dG~Is~~El~~~l~~lg-~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~----~~el~~aF~~fD~~-~G~ 95 (624)
T 1djx_A 22 KNKDNKMNFKELKDFLKELN-IQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ----RAEIDRAFEEAAGS-AET 95 (624)
T ss_dssp -----------------------------------------------CTTHHHHHHTC----CHHHHHHHHHHHTT-SSS
T ss_pred CCCCCcCcHHHHHHHHHHcC-CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhcc----HHHHHHHHHHhcCC-CCe
Confidence 56667777777777666442 2345677889999999999999999999999987632 46899999999985 999
Q ss_pred ccHHHHHHHHHHh-CCC-CCHHHHHHHHHHhCCC----CCCceeHHHHHHHHhcc
Q psy2947 388 VPAKYLKHVLVNW-GEG-LSSKEVDQIFREANVT----MNSKVRYEDFVKIACAP 436 (441)
Q Consensus 388 is~~ef~~~l~~~-~~~-l~~~~~~~l~~~~d~d----~dg~i~~~ef~~~l~~~ 436 (441)
|+.+||+++|... |.. +++++++++++.+|.| ++|.|+|+||+++|...
T Consensus 96 Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~ 150 (624)
T 1djx_A 96 LSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSA 150 (624)
T ss_dssp EEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHST
T ss_pred ecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcCc
Confidence 9999999999975 666 8999999999999988 79999999999999754
No 227
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.51 E-value=2.1e-14 Score=145.77 Aligned_cols=166 Identities=20% Similarity=0.214 Sum_probs=133.5
Q ss_pred CCCcccEEeccCCCcC--cccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEc
Q psy2947 59 YFSHAFLLSLSYTPIG--RRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYL 136 (441)
Q Consensus 59 ~l~~L~~l~l~~n~i~--~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l 136 (441)
.+.+|+.|++++|.|. +.+..+++|+.|+|++|+++.+|+ +..+++|+.|+|++|.+. .+| .+..+++|++|+|
T Consensus 41 ~L~~L~~L~l~~n~i~~l~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~--~l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 41 ELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENKIK--DLS-SLKDLKKLKSLSL 116 (605)
T ss_dssp HHTTCCCCBCTTCCCCCCTTGGGCTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCC--CCT-TSTTCTTCCEEEC
T ss_pred cCCCCCEEECcCCCCCCChHHccCCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCCCC--CCh-hhccCCCCCEEEe
Confidence 4788999999999543 357889999999999999998877 999999999999999998 566 6899999999999
Q ss_pred cCCCCCccchhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhcccccc
Q psy2947 137 DNNLLDALPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIASK 215 (441)
Q Consensus 137 ~~n~l~~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~l~ 215 (441)
++|+|..+| .+..+++|+.|+|++|.+... ..+..++.+..+ +++|.+..+++ +..++.|+.|+++
T Consensus 117 s~N~l~~l~-~l~~l~~L~~L~Ls~N~l~~l-----------~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls 183 (605)
T 1m9s_A 117 EHNGISDIN-GLVHLPQLESLYLGNNKITDI-----------TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLS 183 (605)
T ss_dssp TTSCCCCCG-GGGGCTTCSEEECCSSCCCCC-----------GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECC
T ss_pred cCCCCCCCc-cccCCCccCEEECCCCccCCc-----------hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECc
Confidence 999999886 478899999999999996432 345666777777 88899988876 9999999999999
Q ss_pred cccCCCCCCCchhhhHHHhhhcCCccccc
Q psy2947 216 ENFFEPGLFPGPLVDYIAREYNQYHVCHY 244 (441)
Q Consensus 216 ~n~~~~~~~p~~~~~~l~~~~~~~~~~~~ 244 (441)
+|.+.. +| .+.....+....+..|++
T Consensus 184 ~N~i~~--l~-~l~~l~~L~~L~L~~N~l 209 (605)
T 1m9s_A 184 KNHISD--LR-ALAGLKNLDVLELFSQEC 209 (605)
T ss_dssp SSCCCB--CG-GGTTCTTCSEEECCSEEE
T ss_pred CCCCCC--Ch-HHccCCCCCEEEccCCcC
Confidence 998764 43 333323333344444443
No 228
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.51 E-value=4.1e-14 Score=143.50 Aligned_cols=152 Identities=16% Similarity=0.165 Sum_probs=105.5
Q ss_pred CCCCcccEEeccCCC----cCcccCCCCCCCEEEccCCCCCcCC---cCccCCCCCcEEEccCCcCCCCCCchh-hhcCC
Q psy2947 58 QYFSHAFLLSLSYTP----IGRRIFKCDTVEVLSLKSNSLTSLP---PDIGRLTNLRVLCLTDNCLQNASIPFT-LTFCK 129 (441)
Q Consensus 58 ~~l~~L~~l~l~~n~----i~~~~~~l~~L~~L~l~~n~l~~lp---~~~~~l~~L~~L~l~~n~l~~~~~p~~-~~~l~ 129 (441)
..+++|+.|++++|. +|..+..+++|++|+|++|+++.+| ..+..+++|+.|++++|.++ +.+|.. +..++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~~l~ 428 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLN-SHAYDRTCAWAE 428 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCB-SCCSSCCCCCCT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCC-CccChhhhcCcc
Confidence 446677777777773 3455666777777777777777544 34677777777777777776 336654 56667
Q ss_pred CCCEEEccCCCCC-ccchhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCch-hhhh
Q psy2947 130 NLTHLYLDNNLLD-ALPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSR-LQDL 206 (441)
Q Consensus 130 ~L~~L~l~~n~l~-~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~-l~~l 206 (441)
+|++|++++|+++ .+|..+. ++|+.|++++|++. .+|..+..++.+..+ +++|.+..+|.. +..+
T Consensus 429 ~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~----------~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l 496 (562)
T 3a79_B 429 SILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM----------SIPKDVTHLQALQELNVASNQLKSVPDGVFDRL 496 (562)
T ss_dssp TCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC----------CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTC
T ss_pred cCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc----------ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcC
Confidence 7777777777773 3443332 56777777777752 456666677777777 888888888876 8888
Q ss_pred hhhcccccccccCCCC
Q psy2947 207 AVQSVIASKENFFEPG 222 (441)
Q Consensus 207 ~~l~~l~l~~n~~~~~ 222 (441)
+.|+.+++++|++.+.
T Consensus 497 ~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 497 TSLQYIWLHDNPWDCT 512 (562)
T ss_dssp TTCCCEECCSCCBCCC
T ss_pred CCCCEEEecCCCcCCC
Confidence 8999999999988764
No 229
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.51 E-value=4.3e-14 Score=142.88 Aligned_cols=164 Identities=16% Similarity=0.188 Sum_probs=106.1
Q ss_pred CCCcccEEeccCCCcCc-------ccCCCCCCCEEEccCCCCCcCCc---CccCCCCCcEEEccCCcCCCCCCchhhhcC
Q psy2947 59 YFSHAFLLSLSYTPIGR-------RIFKCDTVEVLSLKSNSLTSLPP---DIGRLTNLRVLCLTDNCLQNASIPFTLTFC 128 (441)
Q Consensus 59 ~l~~L~~l~l~~n~i~~-------~~~~l~~L~~L~l~~n~l~~lp~---~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l 128 (441)
.+++|+.|++++|.+.. .+..+++|++|+|++|+++.+|. .+..+++|++|++++|+++ .+|..+..+
T Consensus 332 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~--~lp~~~~~~ 409 (549)
T 2z81_A 332 HLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH--PMPDSCQWP 409 (549)
T ss_dssp HCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC--CCCSCCCCC
T ss_pred cCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc--cCChhhccc
Confidence 36777777887775532 24567777777777777776653 3677777777777777776 677777777
Q ss_pred CCCCEEEccCCCCCccchhh------------------cCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH
Q psy2947 129 KNLTHLYLDNNLLDALPGFL------------------LSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV 190 (441)
Q Consensus 129 ~~L~~L~l~~n~l~~lp~~~------------------~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~ 190 (441)
++|++|++++|+++.+|..+ ..+++|+.|++++|++. .+|. ...++.+..+
T Consensus 410 ~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~----------~ip~-~~~l~~L~~L 478 (549)
T 2z81_A 410 EKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK----------TLPD-ASLFPVLLVM 478 (549)
T ss_dssp TTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS----------SCCC-GGGCTTCCEE
T ss_pred ccccEEECCCCCcccccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccC----------cCCC-cccCccCCEE
Confidence 77777777777776665432 24555666666666543 2333 2344555555
Q ss_pred -HhhcccccCCc-hhhhhhhhcccccccccCCCCCCC--chhhhHHHhhh
Q psy2947 191 -LRKQKKLHQPS-RLQDLAVQSVIASKENFFEPGLFP--GPLVDYIAREY 236 (441)
Q Consensus 191 -l~~~~~~~~p~-~l~~l~~l~~l~l~~n~~~~~~~p--~~~~~~l~~~~ 236 (441)
+++|.+..+|+ .+..++.|+.+++++|++.+. .| ..+.+|+....
T Consensus 479 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-~~~~~~l~~~l~~~~ 527 (549)
T 2z81_A 479 KISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS-CPRIDYLSRWLNKNS 527 (549)
T ss_dssp ECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC-HHHHHHHHHHHHHCT
T ss_pred ecCCCccCCcCHHHHhcCcccCEEEecCCCccCC-CccHHHHHHHHHhcc
Confidence 77787766654 478888888888888888753 33 23344554443
No 230
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.51 E-value=7.3e-15 Score=137.50 Aligned_cols=151 Identities=17% Similarity=0.114 Sum_probs=114.5
Q ss_pred cccEEeccCCC-----cCcccC-------CCCCCCEEEccCCCCC-cCCcCc--cCCCCCcEEEccCCcCCCCCCchhhh
Q psy2947 62 HAFLLSLSYTP-----IGRRIF-------KCDTVEVLSLKSNSLT-SLPPDI--GRLTNLRVLCLTDNCLQNASIPFTLT 126 (441)
Q Consensus 62 ~L~~l~l~~n~-----i~~~~~-------~l~~L~~L~l~~n~l~-~lp~~~--~~l~~L~~L~l~~n~l~~~~~p~~~~ 126 (441)
.|+.|++++|. +|..+. .+++|++|+|++|.++ .+|..+ ..+++|++|++++|+++ .+|..+.
T Consensus 64 ~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~--~~~~~~~ 141 (312)
T 1wwl_A 64 IIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWA--TRDAWLA 141 (312)
T ss_dssp HHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCS--SSSSHHH
T ss_pred HHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCc--chhHHHH
Confidence 47888888884 444444 6889999999999998 788875 88999999999999998 4587777
Q ss_pred cC-----CCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCcCccCcccccccccccccc--cccchhHHH-Hhhcccc
Q psy2947 127 FC-----KNLTHLYLDNNLLDALP-GFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARI--RSTSTRDEV-LRKQKKL 197 (441)
Q Consensus 127 ~l-----~~L~~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l--~~l~~~~~~-l~~~~~~ 197 (441)
.+ ++|++|++++|+++.++ ..++.+++|++|++++|++.... .+|..+ ..++.+..+ +++|.+.
T Consensus 142 ~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-------~~~~~~~~~~l~~L~~L~L~~N~l~ 214 (312)
T 1wwl_A 142 ELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGER-------GLISALCPLKFPTLQVLALRNAGME 214 (312)
T ss_dssp HHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHH-------HHHHHSCTTSCTTCCEEECTTSCCC
T ss_pred HHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcch-------HHHHHHHhccCCCCCEEECCCCcCc
Confidence 77 89999999999998877 78889999999999999842210 123233 556666666 7788877
Q ss_pred cCCc---h-hhhhhhhcccccccccCCC
Q psy2947 198 HQPS---R-LQDLAVQSVIASKENFFEP 221 (441)
Q Consensus 198 ~~p~---~-l~~l~~l~~l~l~~n~~~~ 221 (441)
.+|. . +..++.|+.|++++|.+..
T Consensus 215 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 242 (312)
T 1wwl_A 215 TPSGVCSALAAARVQLQGLDLSHNSLRD 242 (312)
T ss_dssp CHHHHHHHHHHTTCCCSEEECTTSCCCS
T ss_pred chHHHHHHHHhcCCCCCEEECCCCcCCc
Confidence 4442 2 2456899999999998764
No 231
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.51 E-value=1.8e-13 Score=120.01 Aligned_cols=108 Identities=27% Similarity=0.320 Sum_probs=93.4
Q ss_pred CCCCCcccEEeccCCCc---Cc-ccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCch-hhhcCCC
Q psy2947 57 PQYFSHAFLLSLSYTPI---GR-RIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPF-TLTFCKN 130 (441)
Q Consensus 57 ~~~l~~L~~l~l~~n~i---~~-~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~-~~~~l~~ 130 (441)
...+++|+.|++++|.+ |. .+..+++|++|+|++|+++.+|.. |..+++|++|++++|.++ .+|. .+..+++
T Consensus 48 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~ 125 (208)
T 2o6s_A 48 FDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ--SLPDGVFDKLTQ 125 (208)
T ss_dssp TTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC--CCCTTTTTTCTT
T ss_pred hcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCc--ccCHhHhccCCc
Confidence 34588999999999954 43 356789999999999999988876 789999999999999998 5555 4789999
Q ss_pred CCEEEccCCCCCccch-hhcCCCCCCEEEccCCcCcc
Q psy2947 131 LTHLYLDNNLLDALPG-FLLSMPQLDTVYRHGNHNYF 166 (441)
Q Consensus 131 L~~L~l~~n~l~~lp~-~~~~l~~L~~L~l~~N~~~~ 166 (441)
|++|++++|+++.+|. .+..+++|+.|++++|++.+
T Consensus 126 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 126 LKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred CCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 9999999999998884 57889999999999998644
No 232
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.51 E-value=5.6e-14 Score=142.64 Aligned_cols=151 Identities=17% Similarity=0.135 Sum_probs=111.3
Q ss_pred CcccEEeccCCCcC----cccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEE
Q psy2947 61 SHAFLLSLSYTPIG----RRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLY 135 (441)
Q Consensus 61 ~~L~~l~l~~n~i~----~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~ 135 (441)
.+++.|++++|.+. ..+..+++|++|+|++|+++.+++. |..+++|++|++++|.++ +..|..+.++++|++|+
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEEE
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCC-ccCHhhhcCcccccccc
Confidence 47888888888542 4577788888888888888877554 888888888888888887 33345778888888888
Q ss_pred ccCCCCCccch-hhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCC-chhhhhhhh---
Q psy2947 136 LDNNLLDALPG-FLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQP-SRLQDLAVQ--- 209 (441)
Q Consensus 136 l~~n~l~~lp~-~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p-~~l~~l~~l--- 209 (441)
+++|+++.+|. .++.+++|++|++++|.+.. ..+|..+..++.+..+ +.+|.+..++ ..+..+..|
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~--------~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~ 178 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQS--------FKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCC--------CCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTC
T ss_pred ccccccccCCCccccccccccEEecCCCccce--------ecChhhhcccCCCCEEeCcCCccceecHHHccchhccchh
Confidence 88888888774 67888888888888888532 1356667777777766 7777765553 456666666
Q ss_pred -cccccccccCC
Q psy2947 210 -SVIASKENFFE 220 (441)
Q Consensus 210 -~~l~l~~n~~~ 220 (441)
..++++.|.+.
T Consensus 179 ~~~L~l~~n~l~ 190 (570)
T 2z63_A 179 NLSLDLSLNPMN 190 (570)
T ss_dssp CCEEECTTCCCC
T ss_pred hhhcccCCCCce
Confidence 56677766544
No 233
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=99.51 E-value=1e-13 Score=119.59 Aligned_cols=122 Identities=18% Similarity=0.159 Sum_probs=103.4
Q ss_pred CCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCC-CCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCccc
Q psy2947 311 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTT-KSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVP 389 (441)
Q Consensus 311 ~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d-~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is 389 (441)
.++++.+++..+.... ..+.++++.+|+.||.+ ++|.|+++||..++............+..+|+.+|.+++|.|+
T Consensus 5 ~~~l~~~~l~~l~~~~---~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~ 81 (190)
T 1g8i_A 5 NSKLKPEVVEELTRKT---YFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIE 81 (190)
T ss_dssp CCSCCHHHHHHHHHTS---SSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEE
T ss_pred cccCCHHHHHHHHHcc---CCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEe
Confidence 4456667766666533 34678899999999998 8999999999999987733334467799999999999999999
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 390 AKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 390 ~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
++||..++...+...+.+++..+|+.+|.|++|.|+++||..++..
T Consensus 82 ~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~ 127 (190)
T 1g8i_A 82 FSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 127 (190)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHH
Confidence 9999999998876677889999999999999999999999998865
No 234
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.51 E-value=2.1e-14 Score=136.66 Aligned_cols=188 Identities=17% Similarity=0.197 Sum_probs=126.9
Q ss_pred CCCC-CccCCC-CccCCC---CCCCCC-CcccEEeccCCCc---Cc-ccCCCCCCCEEEccCCCCC-cCCcC-ccCCCCC
Q psy2947 39 CQRN-CSLEVG-GICSHI---WIPQYF-SHAFLLSLSYTPI---GR-RIFKCDTVEVLSLKSNSLT-SLPPD-IGRLTNL 106 (441)
Q Consensus 39 C~~~-c~~~~~-~~c~~~---~~~~~l-~~L~~l~l~~n~i---~~-~~~~l~~L~~L~l~~n~l~-~lp~~-~~~l~~L 106 (441)
||.. |+|..+ +.|++. .+|..+ ++++.|+|++|.| |. .+.++++|++|+|++|++. .+|.. |.++++|
T Consensus 2 Cp~~~C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l 81 (350)
T 4ay9_X 2 CHHRICHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKL 81 (350)
T ss_dssp CCCSSSEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTC
T ss_pred CCCCccEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhh
Confidence 8864 999644 778763 455544 5899999999954 54 5778999999999999985 57765 8888887
Q ss_pred cE-EEccCCcCCCCCC-chhhhcCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccC-CcCccCcc--ccc--------
Q psy2947 107 RV-LCLTDNCLQNASI-PFTLTFCKNLTHLYLDNNLLDALP-GFLLSMPQLDTVYRHG-NHNYFKST--FMW-------- 172 (441)
Q Consensus 107 ~~-L~l~~n~l~~~~~-p~~~~~l~~L~~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~-N~~~~~~~--~~~-------- 172 (441)
.+ +.+++|+++ .+ |..+..+++|++|++++|+|..+| ..+....++..|++.+ |.+..... +..
T Consensus 82 ~~~l~~~~N~l~--~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L 159 (350)
T 4ay9_X 82 HEIRIEKANNLL--YINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVIL 159 (350)
T ss_dssp CEEEEEEETTCC--EECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEE
T ss_pred hhhhcccCCccc--ccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhh
Confidence 75 666778888 55 456789999999999999998776 3344445555666644 23221110 000
Q ss_pred -----ccccccccccccchhHHH-H-hhcccccCCc-hhhhhhhhcccccccccCCCCCCCchhhh
Q psy2947 173 -----YHSDIHARIRSTSTRDEV-L-RKQKKLHQPS-RLQDLAVQSVIASKENFFEPGLFPGPLVD 230 (441)
Q Consensus 173 -----~~~~~p~~l~~l~~~~~~-l-~~~~~~~~p~-~l~~l~~l~~l~l~~n~~~~~~~p~~~~~ 230 (441)
-...+|..+.....+..+ + .+|.+..+|+ .+..+++|+.|++++|.+.. +|.....
T Consensus 160 ~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~--lp~~~~~ 223 (350)
T 4ay9_X 160 WLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHS--LPSYGLE 223 (350)
T ss_dssp ECCSSCCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCC--CCSSSCT
T ss_pred ccccccccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCc--cChhhhc
Confidence 001233333333333334 3 4577888885 46899999999999998765 7765433
No 235
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.51 E-value=9.4e-15 Score=151.90 Aligned_cols=143 Identities=20% Similarity=0.150 Sum_probs=115.6
Q ss_pred CcccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEccCCCCCccchhhcCCCC
Q psy2947 74 GRRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLDALPGFLLSMPQ 153 (441)
Q Consensus 74 ~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~ 153 (441)
|..+..++.|+.|+|++|.+..+|..+..+++|+.|+|++|.|+ .+|..++.+++|++|+|++|.|+.+|..|+.+++
T Consensus 217 ~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~--~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~ 294 (727)
T 4b8c_D 217 KDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLT--ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQ 294 (727)
T ss_dssp -----CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCS--CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTT
T ss_pred hhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCc--ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCC
Confidence 45677889999999999999999999889999999999999998 8999999999999999999999999999999999
Q ss_pred CCEEEccCCcCccCcccccccccccccccccchhHHH-Hhhccccc-CCchhhhhhhh-cccccccccCCCCCCCchhh
Q psy2947 154 LDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLH-QPSRLQDLAVQ-SVIASKENFFEPGLFPGPLV 229 (441)
Q Consensus 154 L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~-~p~~l~~l~~l-~~l~l~~n~~~~~~~p~~~~ 229 (441)
|++|+|++|.+ ..+|..+..++.+..+ +++|.+.. +|..+..+... ..+++++|.+. +.+|..+.
T Consensus 295 L~~L~L~~N~l----------~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~-~~~p~~l~ 362 (727)
T 4b8c_D 295 LKYFYFFDNMV----------TTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPE-IPLPHERR 362 (727)
T ss_dssp CSEEECCSSCC----------CCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCC--
T ss_pred CCEEECCCCCC----------CccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCccc-CcCccccc
Confidence 99999999986 3567778888888888 89998864 45555554322 34667777665 55666543
No 236
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.51 E-value=1.4e-14 Score=135.46 Aligned_cols=152 Identities=15% Similarity=0.066 Sum_probs=113.5
Q ss_pred CCCCcccEEeccCCCcCc--------ccCCCCCCCEEEccCCCCCcCCc-CccCCCCCcEEEccCCcCCCCC--Cchh--
Q psy2947 58 QYFSHAFLLSLSYTPIGR--------RIFKCDTVEVLSLKSNSLTSLPP-DIGRLTNLRVLCLTDNCLQNAS--IPFT-- 124 (441)
Q Consensus 58 ~~l~~L~~l~l~~n~i~~--------~~~~l~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~l~~n~l~~~~--~p~~-- 124 (441)
..+++|+.|++++|.+.. .+..+++|++|+|++|+++.++. .|..+++|++|++++|++. +. ++..
T Consensus 114 ~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~~ 192 (310)
T 4glp_A 114 ATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGL-GERGLMAALC 192 (310)
T ss_dssp CCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTC-HHHHHHTTSC
T ss_pred ccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCc-cchhhhHHHh
Confidence 447889999999996653 23458899999999999986664 5889999999999999875 22 3222
Q ss_pred hhcCCCCCEEEccCCCCCccch----hhcCCCCCCEEEccCCcCccCccccccccccccccccc---chhHHH-Hhhccc
Q psy2947 125 LTFCKNLTHLYLDNNLLDALPG----FLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRST---STRDEV-LRKQKK 196 (441)
Q Consensus 125 ~~~l~~L~~L~l~~n~l~~lp~----~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l---~~~~~~-l~~~~~ 196 (441)
+..+++|++|++++|+++.+|. .+..+++|++|+|++|.+... .|..+..+ +.+..+ +++|.+
T Consensus 193 ~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~---------~p~~~~~~~~~~~L~~L~Ls~N~l 263 (310)
T 4glp_A 193 PHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRAT---------VNPSAPRCMWSSALNSLNLSFAGL 263 (310)
T ss_dssp TTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCC---------CCSCCSSCCCCTTCCCEECCSSCC
T ss_pred hhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCcc---------chhhHHhccCcCcCCEEECCCCCC
Confidence 3678899999999999987764 356788999999999986332 24444443 455555 778888
Q ss_pred ccCCchhhhhhhhcccccccccCCC
Q psy2947 197 LHQPSRLQDLAVQSVIASKENFFEP 221 (441)
Q Consensus 197 ~~~p~~l~~l~~l~~l~l~~n~~~~ 221 (441)
..+|..+. ++|+.|+++.|.+..
T Consensus 264 ~~lp~~~~--~~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 264 EQVPKGLP--AKLRVLDLSSNRLNR 286 (310)
T ss_dssp CSCCSCCC--SCCSCEECCSCCCCS
T ss_pred Cchhhhhc--CCCCEEECCCCcCCC
Confidence 88887664 788899999888764
No 237
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.51 E-value=6.4e-14 Score=140.79 Aligned_cols=156 Identities=19% Similarity=0.192 Sum_probs=93.7
Q ss_pred CCcccEEeccCCCcCcccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEccCC
Q psy2947 60 FSHAFLLSLSYTPIGRRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNN 139 (441)
Q Consensus 60 l~~L~~l~l~~n~i~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n 139 (441)
+++|+.|+|++|.|......+++|++|+|++|+|+.+|. +.. +|+.|++++|.++ .+|. .+++|+.|+|++|
T Consensus 79 ~~~L~~L~Ls~N~l~~ip~~l~~L~~L~Ls~N~l~~ip~-l~~--~L~~L~Ls~N~l~--~lp~---~l~~L~~L~Ls~N 150 (571)
T 3cvr_A 79 PPQITVLEITQNALISLPELPASLEYLDACDNRLSTLPE-LPA--SLKHLDVDNNQLT--MLPE---LPALLEYINADNN 150 (571)
T ss_dssp CTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCC-CCT--TCCEEECCSSCCS--CCCC---CCTTCCEEECCSS
T ss_pred cCCCCEEECcCCCCcccccccCCCCEEEccCCCCCCcch-hhc--CCCEEECCCCcCC--CCCC---cCccccEEeCCCC
Confidence 467888888888443211445777777777777777776 544 6677777777666 3555 4556666666666
Q ss_pred CCCccchhhcCCCCCCEEEccCCcCccCcccc----c------ccccccccccccchh-------HHH-HhhcccccCCc
Q psy2947 140 LLDALPGFLLSMPQLDTVYRHGNHNYFKSTFM----W------YHSDIHARIRSTSTR-------DEV-LRKQKKLHQPS 201 (441)
Q Consensus 140 ~l~~lp~~~~~l~~L~~L~l~~N~~~~~~~~~----~------~~~~~p~~l~~l~~~-------~~~-l~~~~~~~~p~ 201 (441)
+|+.+|. .+++|+.|+|++|++...+.+. . -...+|. +.. .+ ..+ +++|.+..+|.
T Consensus 151 ~l~~lp~---~l~~L~~L~Ls~N~L~~lp~l~~~L~~L~Ls~N~L~~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~lp~ 224 (571)
T 3cvr_A 151 QLTMLPE---LPTSLEVLSVRNNQLTFLPELPESLEALDVSTNLLESLPA-VPV--RNHHSEETEIFFRCRENRITHIPE 224 (571)
T ss_dssp CCSCCCC---CCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCC-CC----------CCEEEECCSSCCCCCCG
T ss_pred ccCcCCC---cCCCcCEEECCCCCCCCcchhhCCCCEEECcCCCCCchhh-HHH--hhhcccccceEEecCCCcceecCH
Confidence 6655554 3455555555555543322110 0 0012232 221 22 334 77888888998
Q ss_pred hhhhhhhhcccccccccCCCCCCCchhhh
Q psy2947 202 RLQDLAVQSVIASKENFFEPGLFPGPLVD 230 (441)
Q Consensus 202 ~l~~l~~l~~l~l~~n~~~~~~~p~~~~~ 230 (441)
.+..+++|+.|++++|++.. .+|..+..
T Consensus 225 ~l~~l~~L~~L~L~~N~l~~-~~p~~l~~ 252 (571)
T 3cvr_A 225 NILSLDPTCTIILEDNPLSS-RIRESLSQ 252 (571)
T ss_dssp GGGGSCTTEEEECCSSSCCH-HHHHHHHH
T ss_pred HHhcCCCCCEEEeeCCcCCC-cCHHHHHH
Confidence 88889999999999998763 35555444
No 238
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.50 E-value=1.2e-14 Score=138.65 Aligned_cols=154 Identities=14% Similarity=0.125 Sum_probs=130.5
Q ss_pred CCCCCcccEEeccCCCc----CcccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCch--hhhcCC
Q psy2947 57 PQYFSHAFLLSLSYTPI----GRRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPF--TLTFCK 129 (441)
Q Consensus 57 ~~~l~~L~~l~l~~n~i----~~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~--~~~~l~ 129 (441)
...+++|+.|++++|.+ |..+..+++|++|+|++|+++.+|.. |..+++|++|++++|.++ .+|. .+..++
T Consensus 72 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--~l~~~~~~~~l~ 149 (353)
T 2z80_A 72 LQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK--TLGETSLFSHLT 149 (353)
T ss_dssp TTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS--SSCSSCSCTTCT
T ss_pred hccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc--ccCchhhhccCC
Confidence 44688999999999955 34578899999999999999999987 899999999999999998 7876 678999
Q ss_pred CCCEEEccCC-CCCccc-hhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchh-hh
Q psy2947 130 NLTHLYLDNN-LLDALP-GFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRL-QD 205 (441)
Q Consensus 130 ~L~~L~l~~n-~l~~lp-~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l-~~ 205 (441)
+|++|++++| .++.++ ..+..+++|+.|++++|.+. ...|..+..++.+..+ +.+|.+..+|..+ ..
T Consensus 150 ~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~---------~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~ 220 (353)
T 2z80_A 150 KLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ---------SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDV 220 (353)
T ss_dssp TCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC---------EECTTTTTTCSEEEEEEEECSCSTTHHHHHHHH
T ss_pred CCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcC---------ccCHHHHhccccCCeecCCCCccccchhhhhhh
Confidence 9999999999 578775 67899999999999999953 3346677777777777 8888887777654 45
Q ss_pred hhhhcccccccccCCC
Q psy2947 206 LAVQSVIASKENFFEP 221 (441)
Q Consensus 206 l~~l~~l~l~~n~~~~ 221 (441)
++.|+.+++++|.+..
T Consensus 221 ~~~L~~L~L~~n~l~~ 236 (353)
T 2z80_A 221 TSSVECLELRDTDLDT 236 (353)
T ss_dssp TTTEEEEEEESCBCTT
T ss_pred cccccEEECCCCcccc
Confidence 8899999999998764
No 239
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.50 E-value=4.5e-14 Score=133.24 Aligned_cols=149 Identities=19% Similarity=0.168 Sum_probs=125.3
Q ss_pred CCcccEEeccCCCcC----cccCCCCCCCEEEccCCCCC---cCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCC
Q psy2947 60 FSHAFLLSLSYTPIG----RRIFKCDTVEVLSLKSNSLT---SLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLT 132 (441)
Q Consensus 60 l~~L~~l~l~~n~i~----~~~~~l~~L~~L~l~~n~l~---~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~ 132 (441)
.++|+.|++++|.+. ..+..+++|+.|++++|.++ ..+..+..+++|+.|++++|.++ .+|..+. ++|+
T Consensus 120 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~--~l~~~~~--~~L~ 195 (330)
T 1xku_A 120 PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT--TIPQGLP--PSLT 195 (330)
T ss_dssp CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC--SCCSSCC--TTCS
T ss_pred cccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc--cCCcccc--ccCC
Confidence 378999999999553 34678999999999999997 34556999999999999999998 7887654 8999
Q ss_pred EEEccCCCCCcc-chhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhc
Q psy2947 133 HLYLDNNLLDAL-PGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQS 210 (441)
Q Consensus 133 ~L~l~~n~l~~l-p~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~ 210 (441)
+|++++|.++.+ |..+..+++|+.|++++|.+.. ..+..+..++.+..+ +.+|.+..+|..+..++.|+
T Consensus 196 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~---------~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~ 266 (330)
T 1xku_A 196 ELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA---------VDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQ 266 (330)
T ss_dssp EEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCE---------ECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCC
T ss_pred EEECCCCcCCccCHHHhcCCCCCCEEECCCCcCce---------eChhhccCCCCCCEEECCCCcCccCChhhccCCCcC
Confidence 999999999877 5788999999999999999633 224466777777777 88899999999999999999
Q ss_pred ccccccccCCC
Q psy2947 211 VIASKENFFEP 221 (441)
Q Consensus 211 ~l~l~~n~~~~ 221 (441)
.+++++|.+..
T Consensus 267 ~L~l~~N~i~~ 277 (330)
T 1xku_A 267 VVYLHNNNISA 277 (330)
T ss_dssp EEECCSSCCCC
T ss_pred EEECCCCcCCc
Confidence 99999998764
No 240
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.50 E-value=9.4e-14 Score=131.14 Aligned_cols=179 Identities=16% Similarity=0.150 Sum_probs=129.9
Q ss_pred CCCCCcccEEeccCCCc----CcccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCch-hhhcCCCC
Q psy2947 57 PQYFSHAFLLSLSYTPI----GRRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPF-TLTFCKNL 131 (441)
Q Consensus 57 ~~~l~~L~~l~l~~n~i----~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~-~~~~l~~L 131 (441)
...+++|+.|++++|.+ |..+..+++|++|+|++|+++.+|..+. ++|++|++++|.++ .+|. .+..+++|
T Consensus 74 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~--~~L~~L~l~~n~i~--~~~~~~~~~l~~L 149 (332)
T 2ft3_A 74 FKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP--SSLVELRIHDNRIR--KVPKGVFSGLRNM 149 (332)
T ss_dssp TTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSCCSSCC--TTCCEEECCSSCCC--CCCSGGGSSCSSC
T ss_pred hhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCccCcccc--ccCCEEECCCCccC--ccCHhHhCCCccC
Confidence 34688999999999954 4668889999999999999999998865 89999999999998 5554 57889999
Q ss_pred CEEEccCCCCCc---cchhhcCCCCCCEEEccCCcCccCccc-----c-------cccccccccccccchhHHH-Hhhcc
Q psy2947 132 THLYLDNNLLDA---LPGFLLSMPQLDTVYRHGNHNYFKSTF-----M-------WYHSDIHARIRSTSTRDEV-LRKQK 195 (441)
Q Consensus 132 ~~L~l~~n~l~~---lp~~~~~l~~L~~L~l~~N~~~~~~~~-----~-------~~~~~~p~~l~~l~~~~~~-l~~~~ 195 (441)
++|++++|.++. .|..+..+ +|+.|++++|.+...+.. . .+....+..+..++.+..+ +.+|.
T Consensus 150 ~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~ 228 (332)
T 2ft3_A 150 NCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQ 228 (332)
T ss_dssp CEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSC
T ss_pred CEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCc
Confidence 999999999863 34666666 777777777775433210 0 0222233566777777777 78888
Q ss_pred cccCCc-hhhhhhhhcccccccccCCCCCCCchhhhHHHhhhcCCccc
Q psy2947 196 KLHQPS-RLQDLAVQSVIASKENFFEPGLFPGPLVDYIAREYNQYHVC 242 (441)
Q Consensus 196 ~~~~p~-~l~~l~~l~~l~l~~n~~~~~~~p~~~~~~l~~~~~~~~~~ 242 (441)
+..+++ .+..++.|+.|++++|.+. .+|..+..........+..+
T Consensus 229 l~~~~~~~~~~l~~L~~L~L~~N~l~--~lp~~l~~l~~L~~L~l~~N 274 (332)
T 2ft3_A 229 IRMIENGSLSFLPTLRELHLDNNKLS--RVPAGLPDLKLLQVVYLHTN 274 (332)
T ss_dssp CCCCCTTGGGGCTTCCEEECCSSCCC--BCCTTGGGCTTCCEEECCSS
T ss_pred CCcCChhHhhCCCCCCEEECCCCcCe--ecChhhhcCccCCEEECCCC
Confidence 877764 6888889999999988776 37776655333333444443
No 241
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.50 E-value=5e-14 Score=149.54 Aligned_cols=156 Identities=17% Similarity=0.124 Sum_probs=94.9
Q ss_pred CCCCCCcccEEeccCCCc----CcccCCCCCCCEEEccCCCC-CcC-CcCccCCCCCcEEEccCCcCCCCCCchhhhcCC
Q psy2947 56 IPQYFSHAFLLSLSYTPI----GRRIFKCDTVEVLSLKSNSL-TSL-PPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCK 129 (441)
Q Consensus 56 ~~~~l~~L~~l~l~~n~i----~~~~~~l~~L~~L~l~~n~l-~~l-p~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~ 129 (441)
+|..+++|+.|+|++|.| |..+..+++|++|+|++|.+ ..+ |..|.++++|++|+|++|.++ +..|..+.+++
T Consensus 19 vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~-~~~p~~~~~l~ 97 (844)
T 3j0a_A 19 VPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIY-FLHPDAFQGLF 97 (844)
T ss_dssp CCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCC-EECTTSSCSCS
T ss_pred CCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCc-ccCHhHccCCc
Confidence 344446777777777743 34566777777777777743 355 444777777777777777776 44466677777
Q ss_pred CCCEEEccCCCCCc-cchh--hcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-Hhhccccc-CCchhh
Q psy2947 130 NLTHLYLDNNLLDA-LPGF--LLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLH-QPSRLQ 204 (441)
Q Consensus 130 ~L~~L~l~~n~l~~-lp~~--~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~-~p~~l~ 204 (441)
+|++|+|++|.++. +|.. +.++++|++|++++|.+.... .+..+..++.+..+ +.+|.+.. .|..+.
T Consensus 98 ~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~--------~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~ 169 (844)
T 3j0a_A 98 HLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLY--------LHPSFGKLNSLKSIDFSSNQIFLVCEHELE 169 (844)
T ss_dssp SCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCC--------CCGGGGTCSSCCEEEEESSCCCCCCSGGGH
T ss_pred ccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccc--------cchhHhhCCCCCEEECCCCcCCeeCHHHcc
Confidence 77777777777753 4433 667777777777777653211 12345555555555 55555533 344555
Q ss_pred hh--hhhcccccccccCC
Q psy2947 205 DL--AVQSVIASKENFFE 220 (441)
Q Consensus 205 ~l--~~l~~l~l~~n~~~ 220 (441)
.+ ++|+.++++.|.+.
T Consensus 170 ~l~~~~L~~L~L~~n~l~ 187 (844)
T 3j0a_A 170 PLQGKTLSFFSLAANSLY 187 (844)
T ss_dssp HHHHCSSCCCEECCSBSC
T ss_pred cccCCccceEECCCCccc
Confidence 55 55666666665543
No 242
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.49 E-value=1.8e-14 Score=143.14 Aligned_cols=109 Identities=19% Similarity=0.166 Sum_probs=82.9
Q ss_pred CCCCCcccEEeccCCCc----CcccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCchhhhcCCCC
Q psy2947 57 PQYFSHAFLLSLSYTPI----GRRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPFTLTFCKNL 131 (441)
Q Consensus 57 ~~~l~~L~~l~l~~n~i----~~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L 131 (441)
+..+++|+.|+|++|.| |..+.++++|++|+|++|+++.+|.. |..+++|++|++++|.+. +..|..+..+++|
T Consensus 52 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L 130 (477)
T 2id5_A 52 FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV-ILLDYMFQDLYNL 130 (477)
T ss_dssp TTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCC-EECTTTTTTCTTC
T ss_pred ccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccc-cCChhHccccccC
Confidence 34577888888888844 45677788888888888888877765 778888888888888887 4456667788888
Q ss_pred CEEEccCCCCCccc-hhhcCCCCCCEEEccCCcCcc
Q psy2947 132 THLYLDNNLLDALP-GFLLSMPQLDTVYRHGNHNYF 166 (441)
Q Consensus 132 ~~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~~ 166 (441)
++|++++|.+..++ ..|..+++|+.|++++|.+..
T Consensus 131 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 166 (477)
T 2id5_A 131 KSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS 166 (477)
T ss_dssp CEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSS
T ss_pred CEEECCCCccceeChhhccCCCCCCEEECCCCcCcc
Confidence 88888888887664 567778888888888887543
No 243
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.49 E-value=1.3e-14 Score=135.76 Aligned_cols=160 Identities=14% Similarity=0.014 Sum_probs=122.8
Q ss_pred CCcccEEeccCCCc----Cccc--CCCCCCCEEEccCCCCCc-CC----cCccCCCCCcEEEccCCcCCCCCCchhhhcC
Q psy2947 60 FSHAFLLSLSYTPI----GRRI--FKCDTVEVLSLKSNSLTS-LP----PDIGRLTNLRVLCLTDNCLQNASIPFTLTFC 128 (441)
Q Consensus 60 l~~L~~l~l~~n~i----~~~~--~~l~~L~~L~l~~n~l~~-lp----~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l 128 (441)
+++|+.|++++|.+ |..+ ..+++|++|+|++|.++. .| ..+..+++|++|++++|.+. +..|..+..+
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~-~~~~~~~~~l 168 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSP-AFSCEQVRAF 168 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSC-CCCTTSCCCC
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcc-hhhHHHhccC
Confidence 45699999999944 4555 778999999999999994 33 23567999999999999998 5556778999
Q ss_pred CCCCEEEccCCCCCc---cc--hhhcCCCCCCEEEccCCcCccCccccccccccccc-ccccchhHHH-HhhcccccC-C
Q psy2947 129 KNLTHLYLDNNLLDA---LP--GFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHAR-IRSTSTRDEV-LRKQKKLHQ-P 200 (441)
Q Consensus 129 ~~L~~L~l~~n~l~~---lp--~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~-l~~l~~~~~~-l~~~~~~~~-p 200 (441)
++|++|+|++|++.. ++ ..++.+++|++|++++|.+.... ..+.+ +..++.+..+ +++|.+... |
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~-------~~~~~l~~~l~~L~~L~Ls~N~l~~~~p 241 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPT-------GVCAALAAAGVQPHSLDLSHNSLRATVN 241 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHH-------HHHHHHHHHTCCCSSEECTTSCCCCCCC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchH-------HHHHHHHhcCCCCCEEECCCCCCCccch
Confidence 999999999999854 43 33468899999999999974321 11222 3556677777 888988776 7
Q ss_pred chhhhh---hhhcccccccccCCCCCCCchhh
Q psy2947 201 SRLQDL---AVQSVIASKENFFEPGLFPGPLV 229 (441)
Q Consensus 201 ~~l~~l---~~l~~l~l~~n~~~~~~~p~~~~ 229 (441)
+.+..+ +.|+.|++++|.+.. +|..+.
T Consensus 242 ~~~~~~~~~~~L~~L~Ls~N~l~~--lp~~~~ 271 (310)
T 4glp_A 242 PSAPRCMWSSALNSLNLSFAGLEQ--VPKGLP 271 (310)
T ss_dssp SCCSSCCCCTTCCCEECCSSCCCS--CCSCCC
T ss_pred hhHHhccCcCcCCEEECCCCCCCc--hhhhhc
Confidence 777776 699999999998873 776654
No 244
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=99.49 E-value=2.2e-14 Score=134.33 Aligned_cols=117 Identities=21% Similarity=0.391 Sum_probs=83.6
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCc
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGT 387 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~ 387 (441)
.+++|.|+.+||..++..... ..+...+..+|..+|.|++|.|++.+|..++.. ...+..+|..+|.+++|+
T Consensus 133 ~d~dG~Is~~El~~~L~~lg~-~~~~~~i~~l~~~~D~d~~G~I~f~ef~~l~~~-------~~~l~~~F~~~D~d~dG~ 204 (323)
T 1ij5_A 133 VSGSGKFSFQDLKQVLAKYAD-TIPEGPLKKLFVMVENDTKGRMSYITLVAVAND-------LAALVADFRKIDTNSNGT 204 (323)
T ss_dssp STTSSCCCHHHHHHHHHHHHT-TSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHH-------HHTSCCCHHHHCTTCCSE
T ss_pred CCCCCCCcHHHHHHHHHHcCC-CCCHHHHHHHHHHhcCCCCCcCcHHHHHhhhhH-------HHHHHHHHHHHCCCCCCc
Confidence 478999999999999987643 344556777777777777777777777654422 234455677777777777
Q ss_pred ccHHHHHHHHHHhCCCCCHHHHHH-HHHHhCCCCCCceeHHHHHHHHh
Q psy2947 388 VPAKYLKHVLVNWGEGLSSKEVDQ-IFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 388 is~~ef~~~l~~~~~~l~~~~~~~-l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
|+.+||..++ +|..++.+++.. ++..+|.|++|.|+|+||+.++.
T Consensus 205 Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~ 250 (323)
T 1ij5_A 205 LSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGL 250 (323)
T ss_dssp ECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred CcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHH
Confidence 7777777777 566666777777 77777777777777777776654
No 245
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=99.49 E-value=1.4e-13 Score=107.33 Aligned_cols=99 Identities=14% Similarity=0.253 Sum_probs=82.4
Q ss_pred CcCHHHHHHHHH--hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhc--cCCCChHH
Q psy2947 297 SPTIAELKKYLA--EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHS--KAEDIPKE 372 (441)
Q Consensus 297 ~~~~~~~~~~~~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~--~~~~~~~~ 372 (441)
.++..++.+++. +++|.|+++||..++.. .....+.++.+|+.+|.|++|.|+.+||..++.... ......++
T Consensus 6 ~~~~~ei~~~~~~~D~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~ 82 (109)
T 3fs7_A 6 ILSAKDIESALSSCQAADSFNYKSFFSTVGL---SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAE 82 (109)
T ss_dssp TSCHHHHHHHHHHTCSTTCCCHHHHHHHHTC---TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCHHH
T ss_pred cCCHHHHHHHHHhcCCCCcCcHHHHHHHHhc---CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCHHH
Confidence 344555555554 47899999999999874 245678999999999999999999999999988763 34556789
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 373 VVDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 373 ~~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
++.+|+.+|.+++|.|+++||.++++
T Consensus 83 ~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 83 TKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 99999999999999999999999874
No 246
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=99.49 E-value=3e-13 Score=105.46 Aligned_cols=99 Identities=15% Similarity=0.278 Sum_probs=81.6
Q ss_pred cCHHHHHHHHH--hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhc--cCCCChHHH
Q psy2947 298 PTIAELKKYLA--EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHS--KAEDIPKEV 373 (441)
Q Consensus 298 ~~~~~~~~~~~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~--~~~~~~~~~ 373 (441)
++..++.+++. +++|.|+++||..++.. .....+.++.+|+.+|.|++|.|+.+||..++.... ......+++
T Consensus 6 ~s~~ei~~~~~~~d~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~~~~ 82 (109)
T 5pal_A 6 LKADDINKAISAFKDPGTFDYKRFFHLVGL---KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTET 82 (109)
T ss_dssp SCHHHHHHHHHHTCSTTCCCHHHHHHHHTC---TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHH
T ss_pred CCHHHHHHHHHHhCCCCcCcHHHHHHHHhh---ccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCHHHH
Confidence 33444444443 34899999999998864 245678999999999999999999999999998762 445567889
Q ss_pred HHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 374 VDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 374 ~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
+.+|+.+|.+++|.|+++||.++++.
T Consensus 83 ~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 83 KALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp HHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 99999999999999999999999875
No 247
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.49 E-value=3.4e-13 Score=115.06 Aligned_cols=123 Identities=28% Similarity=0.330 Sum_probs=99.6
Q ss_pred ccEEeccCC---CcCcccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCch-hhhcCCCCCEEEcc
Q psy2947 63 AFLLSLSYT---PIGRRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPF-TLTFCKNLTHLYLD 137 (441)
Q Consensus 63 L~~l~l~~n---~i~~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~-~~~~l~~L~~L~l~ 137 (441)
.+.+++++| .+|..+ .++|+.|++++|+++.+|.. |..+++|++|++++|.++ .+|. .+..+++|++|+++
T Consensus 9 ~~~l~~~~~~l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ--SLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp TTEEECCSSCCSSCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC--CCCTTTTTTCTTCCEEECC
T ss_pred CCEEEecCCCCccCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcce--EeChhHccCCCccCEEECC
Confidence 467888887 445433 37899999999999988876 789999999999999998 5655 46899999999999
Q ss_pred CCCCCccch-hhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHHHhhcccccCCc-hhhhhhhhcccccc
Q psy2947 138 NNLLDALPG-FLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEVLRKQKKLHQPS-RLQDLAVQSVIASK 215 (441)
Q Consensus 138 ~n~l~~lp~-~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~l~~~~~~~~p~-~l~~l~~l~~l~l~ 215 (441)
+|+|+.+|. .+..+++|+.|++++|.+. .+|. .+..+++|+.++++
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~--------------------------------~~~~~~~~~l~~L~~L~l~ 132 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLK--------------------------------SVPDGIFDRLTSLQKIWLH 132 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCS--------------------------------CCCTTTTTTCTTCCEEECC
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcce--------------------------------EeCHHHhcCCcccCEEEec
Confidence 999998874 5788999999999999852 2232 24567888899999
Q ss_pred cccCCC
Q psy2947 216 ENFFEP 221 (441)
Q Consensus 216 ~n~~~~ 221 (441)
+|++.+
T Consensus 133 ~N~~~~ 138 (177)
T 2o6r_A 133 TNPWDC 138 (177)
T ss_dssp SSCBCC
T ss_pred CCCeec
Confidence 998875
No 248
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.48 E-value=5.7e-14 Score=142.40 Aligned_cols=152 Identities=16% Similarity=0.152 Sum_probs=123.1
Q ss_pred CcccEEeccCCCcCccc--CCCCCCCEEEccCCCCCc-CCcCccCCCCCcEEEccCCcCCCCCCc---hhhhcCCCCCEE
Q psy2947 61 SHAFLLSLSYTPIGRRI--FKCDTVEVLSLKSNSLTS-LPPDIGRLTNLRVLCLTDNCLQNASIP---FTLTFCKNLTHL 134 (441)
Q Consensus 61 ~~L~~l~l~~n~i~~~~--~~l~~L~~L~l~~n~l~~-lp~~~~~l~~L~~L~l~~n~l~~~~~p---~~~~~l~~L~~L 134 (441)
.+|+.|++++|.+.... ..+++|++|++++|+++. +|..+..+++|+.|++++|+++ .+| ..+..+++|++|
T Consensus 331 ~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~~~l~~L~~L 408 (562)
T 3a79_B 331 MNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK--NFFKVALMTKNMSSLETL 408 (562)
T ss_dssp CCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCC--BTTHHHHTTTTCTTCCEE
T ss_pred CcceEEEccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcC--CcccchhhhcCCCCCCEE
Confidence 34777888888665433 678999999999999994 7888999999999999999998 444 567899999999
Q ss_pred EccCCCCCc-cch-hhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhcc
Q psy2947 135 YLDNNLLDA-LPG-FLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSV 211 (441)
Q Consensus 135 ~l~~n~l~~-lp~-~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~ 211 (441)
++++|+++. +|. .+..+++|+.|++++|++. +.+|..+. +.+..+ +++|.+..+|..+..++.|+.
T Consensus 409 ~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~---------~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~ 477 (562)
T 3a79_B 409 DVSLNSLNSHAYDRTCAWAESILVLNLSSNMLT---------GSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQE 477 (562)
T ss_dssp ECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCC---------GGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSE
T ss_pred ECCCCcCCCccChhhhcCcccCCEEECCCCCCC---------cchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCE
Confidence 999999976 884 5788999999999999953 23333332 334445 788899999998999999999
Q ss_pred cccccccCCCCCCCch
Q psy2947 212 IASKENFFEPGLFPGP 227 (441)
Q Consensus 212 l~l~~n~~~~~~~p~~ 227 (441)
|++++|.+.. +|..
T Consensus 478 L~L~~N~l~~--l~~~ 491 (562)
T 3a79_B 478 LNVASNQLKS--VPDG 491 (562)
T ss_dssp EECCSSCCCC--CCTT
T ss_pred EECCCCCCCC--CCHH
Confidence 9999998874 7765
No 249
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.48 E-value=6.7e-14 Score=121.73 Aligned_cols=107 Identities=17% Similarity=0.170 Sum_probs=94.5
Q ss_pred CCCCcccEEeccCCCc--CcccCCCCCCCEEEccCCCCC-cCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEE
Q psy2947 58 QYFSHAFLLSLSYTPI--GRRIFKCDTVEVLSLKSNSLT-SLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHL 134 (441)
Q Consensus 58 ~~l~~L~~l~l~~n~i--~~~~~~l~~L~~L~l~~n~l~-~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 134 (441)
..+++|+.|++++|.+ +..+..+++|++|++++|.++ ..|..++.+++|++|++++|.++ +..|..+..+++|++|
T Consensus 63 ~~l~~L~~L~l~~n~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~-~~~~~~l~~l~~L~~L 141 (197)
T 4ezg_A 63 EYAHNIKDLTINNIHATNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHD-DSILTKINTLPKVNSI 141 (197)
T ss_dssp GGCTTCSEEEEESCCCSCCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCB-GGGHHHHTTCSSCCEE
T ss_pred hcCCCCCEEEccCCCCCcchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccC-cHhHHHHhhCCCCCEE
Confidence 4578999999999954 356888999999999999999 47788999999999999999998 5678889999999999
Q ss_pred EccCCC-CCccchhhcCCCCCCEEEccCCcCcc
Q psy2947 135 YLDNNL-LDALPGFLLSMPQLDTVYRHGNHNYF 166 (441)
Q Consensus 135 ~l~~n~-l~~lp~~~~~l~~L~~L~l~~N~~~~ 166 (441)
++++|. ++.+| .+..+++|+.|++++|++..
T Consensus 142 ~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~ 173 (197)
T 4ezg_A 142 DLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD 173 (197)
T ss_dssp ECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC
T ss_pred EccCCCCccccH-hhcCCCCCCEEECCCCCCcC
Confidence 999998 88888 68889999999999999643
No 250
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.48 E-value=8.1e-14 Score=144.60 Aligned_cols=149 Identities=21% Similarity=0.217 Sum_probs=115.6
Q ss_pred CcccEEeccCCCc---C-cccCCCCCCCEEEccCCCCCcCCc-CccCCCCCcEEEccCCcCCCCCCch-hhhcCCCCCEE
Q psy2947 61 SHAFLLSLSYTPI---G-RRIFKCDTVEVLSLKSNSLTSLPP-DIGRLTNLRVLCLTDNCLQNASIPF-TLTFCKNLTHL 134 (441)
Q Consensus 61 ~~L~~l~l~~n~i---~-~~~~~l~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~l~~n~l~~~~~p~-~~~~l~~L~~L 134 (441)
++|+.|++++|.+ | ..+..+++|++|+|++|.++.+++ .|+.+++|++|++++|.++ .+|. .++.+++|++|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--~l~~~~~~~l~~L~~L 102 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS--QLSDKTFAFCTNLTEL 102 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCC--CCCTTTTTTCTTCSEE
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccC--ccChhhhccCCCCCEE
Confidence 6899999999843 3 357788999999999999996644 4889999999999999998 6776 58899999999
Q ss_pred EccCCCCCccc-hhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCch-hh--hhhhh
Q psy2947 135 YLDNNLLDALP-GFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSR-LQ--DLAVQ 209 (441)
Q Consensus 135 ~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~-l~--~l~~l 209 (441)
++++|.++.+| ..|+++++|++|++++|.+.. ..|..+..++.+..+ +.+|.+..+++. +. .++.|
T Consensus 103 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~---------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L 173 (680)
T 1ziw_A 103 HLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSS---------TKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSL 173 (680)
T ss_dssp ECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSC---------CCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEE
T ss_pred ECCCCccCccChhHccccCCCCEEECCCCcccc---------cCchhhcccccCCEEEccCCcccccCHHHhhccccccc
Confidence 99999998887 678889999999999998533 234556666666666 777777666543 32 34678
Q ss_pred cccccccccCC
Q psy2947 210 SVIASKENFFE 220 (441)
Q Consensus 210 ~~l~l~~n~~~ 220 (441)
+.++++.|.+.
T Consensus 174 ~~L~L~~n~l~ 184 (680)
T 1ziw_A 174 KKLELSSNQIK 184 (680)
T ss_dssp SEEECTTCCCC
T ss_pred cEEECCCCccc
Confidence 88888887654
No 251
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=99.48 E-value=2.9e-13 Score=105.36 Aligned_cols=98 Identities=15% Similarity=0.169 Sum_probs=81.7
Q ss_pred cCHHHHHHHHH--hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhc--cCCCChHHH
Q psy2947 298 PTIAELKKYLA--EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHS--KAEDIPKEV 373 (441)
Q Consensus 298 ~~~~~~~~~~~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~--~~~~~~~~~ 373 (441)
++..++..++. +++|.|+++||..++... ....+.++.+|+.+|.|++|.|+.+||..++.... ......+++
T Consensus 6 ~~~~e~~~l~~~~d~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~ 82 (108)
T 2pvb_A 6 LKDADVAAALAACSAADSFKHKEFFAKVGLA---SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAET 82 (108)
T ss_dssp SCHHHHHHHHHHTCSTTCCCHHHHHHHHTGG---GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHH
T ss_pred CCHHHHHHHHHHhCCCCcCcHHHHHHHHhCC---hhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHH
Confidence 55555555554 478999999999998542 34678999999999999999999999999998763 344567899
Q ss_pred HHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 374 VDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 374 ~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
+.+|+.+|.+++|.|+++||.+++.
T Consensus 83 ~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 83 KAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp HHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 9999999999999999999999875
No 252
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.48 E-value=5.8e-14 Score=139.71 Aligned_cols=137 Identities=20% Similarity=0.283 Sum_probs=97.3
Q ss_pred cccchHHHHHhhhccccC--CCccCHHHHHHHH----HHcCCCcC----------HHHHHHHHH----hCCCcccHHHHH
Q psy2947 261 FKTPYLEFRECFFLFARN--GTIKTLDELSVIM----RSLGMSPT----------IAELKKYLA----EKGGKLSFPDFL 320 (441)
Q Consensus 261 ~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~----~~~~~~~~----------~~~~~~~~~----~~~g~i~~~ef~ 320 (441)
+.+++.+++++|..+|.+ |.| +.+|+..++ +.++..++ ..++..++. +++|.|+++||.
T Consensus 326 ~~~~~~~l~~~F~~~D~d~dG~I-~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~ 404 (486)
T 3mwu_A 326 TLDETKQLTEIFRKLDTNNDGML-DRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFI 404 (486)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSSB-CHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCCCcee-eHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHH
Confidence 567889999999999986 889 899995554 44465554 566666554 789999999999
Q ss_pred HHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 321 KVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
.++.... .....+.+..+|+.||.|++|.|+.+||..++... +.....++++.+|+.+|.|+||.|+++||.+++...
T Consensus 405 ~~~~~~~-~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~-g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 482 (486)
T 3mwu_A 405 ASAIDRT-ILLSRERMERAFKMFDKDGSGKISTKELFKLFSQA-DSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNF 482 (486)
T ss_dssp HHHSCTT-TTCCHHHHHHHHHHHCSSCSSSBCSSCC---------------------CCCCSSCSSSBCHHHHHHHHHHH
T ss_pred HHHHhhh-ccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc-CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 9886542 23567889999999999999999999999998876 334456789999999999999999999999999874
No 253
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.48 E-value=1.5e-13 Score=138.00 Aligned_cols=94 Identities=29% Similarity=0.333 Sum_probs=81.6
Q ss_pred CcccEEeccCCC---cCcccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEcc
Q psy2947 61 SHAFLLSLSYTP---IGRRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLD 137 (441)
Q Consensus 61 ~~L~~l~l~~n~---i~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~ 137 (441)
.+|+.|++++|. ||..+ +++|++|+|++|.|+.+| ..+++|+.|++++|.|+ .+|. +.. +|++|+|+
T Consensus 59 ~~L~~L~Ls~n~L~~lp~~l--~~~L~~L~Ls~N~l~~ip---~~l~~L~~L~Ls~N~l~--~ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 59 NQFSELQLNRLNLSSLPDNL--PPQITVLEITQNALISLP---ELPASLEYLDACDNRLS--TLPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TTCSEEECCSSCCSCCCSCC--CTTCSEEECCSSCCSCCC---CCCTTCCEEECCSSCCS--CCCC-CCT--TCCEEECC
T ss_pred CCccEEEeCCCCCCccCHhH--cCCCCEEECcCCCCcccc---cccCCCCEEEccCCCCC--Ccch-hhc--CCCEEECC
Confidence 378999999984 55555 378999999999999999 45799999999999998 5888 654 99999999
Q ss_pred CCCCCccchhhcCCCCCCEEEccCCcCccC
Q psy2947 138 NNLLDALPGFLLSMPQLDTVYRHGNHNYFK 167 (441)
Q Consensus 138 ~n~l~~lp~~~~~l~~L~~L~l~~N~~~~~ 167 (441)
+|+|+.+|. .+++|+.|++++|.+...
T Consensus 129 ~N~l~~lp~---~l~~L~~L~Ls~N~l~~l 155 (571)
T 3cvr_A 129 NNQLTMLPE---LPALLEYINADNNQLTML 155 (571)
T ss_dssp SSCCSCCCC---CCTTCCEEECCSSCCSCC
T ss_pred CCcCCCCCC---cCccccEEeCCCCccCcC
Confidence 999999998 689999999999997543
No 254
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=99.47 E-value=3.3e-13 Score=105.23 Aligned_cols=102 Identities=16% Similarity=0.187 Sum_probs=84.8
Q ss_pred cCCCcCHHHHHHHHH--hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhc--cCCCC
Q psy2947 294 LGMSPTIAELKKYLA--EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHS--KAEDI 369 (441)
Q Consensus 294 ~~~~~~~~~~~~~~~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~--~~~~~ 369 (441)
++..++..++..++. +++|.|+++||..++... ....+.++.+|+.+|.|++|.|+.+||..++.... .....
T Consensus 3 lg~~~~~~e~~~~~~~~d~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~ 79 (109)
T 1bu3_A 3 FSGILADADVAAALKACEAADSFNYKAFFAKVGLT---AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALT 79 (109)
T ss_dssp CSCSSCHHHHHHHHHHTCSTTCCCHHHHHHHHTGG---GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCC
T ss_pred ccccCCHHHHHHHHHHhCCCCcCcHHHHHHHHHcC---hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCC
Confidence 345566666666654 478999999999988643 34678899999999999999999999999998873 34456
Q ss_pred hHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 370 PKEVVDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 370 ~~~~~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
.++++.+|+.+|.+++|.|+++||.++++
T Consensus 80 ~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 80 DAETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 78999999999999999999999999874
No 255
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=99.47 E-value=8e-14 Score=148.39 Aligned_cols=154 Identities=14% Similarity=0.167 Sum_probs=121.3
Q ss_pred chHHHHHhhhccc-cCCCccCHHHHHHHHHHcCC--------CcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCC
Q psy2947 264 PYLEFRECFFLFA-RNGTIKTLDELSVIMRSLGM--------SPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAE 330 (441)
Q Consensus 264 ~~~~l~~~f~~~d-~~G~i~~~~el~~~~~~~~~--------~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~ 330 (441)
+.++++++|..+| .+|.| +.+|++.+++.++. .++..++..++. +++|.|+++||..++...
T Consensus 532 ~~~~l~~~F~~~D~~dG~I-s~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~~---- 606 (900)
T 1qxp_A 532 IDDNFKTLFSKLAGDDMEI-SVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRI---- 606 (900)
T ss_dssp ---------CCCCCSSSSC-CCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHHH----
T ss_pred HHHHHHHHHHHHcCCCCcC-CHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH----
Confidence 3788999999998 23888 88999999888754 677888877765 688999999999999865
Q ss_pred CCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHH
Q psy2947 331 DIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVD 410 (441)
Q Consensus 331 ~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~ 410 (441)
+.++.+|+.+|.|++|.|+.+||..++.... .....++++.+|+.+| +++|.|+++||..++... +.+.
T Consensus 607 ---~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g-~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~------~~l~ 675 (900)
T 1qxp_A 607 ---RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAG-FKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRL------EILF 675 (900)
T ss_dssp ---HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTT-EECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHH------HHHH
T ss_pred ---HHHHHHHHhhCCCCCCeECHHHHHHHHHHhC-CCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHH------HHHH
Confidence 7899999999999999999999999998763 3455788999999999 999999999999999764 6788
Q ss_pred HHHHHhCCCCCCce--eHHHHHHHH
Q psy2947 411 QIFREANVTMNSKV--RYEDFVKIA 433 (441)
Q Consensus 411 ~l~~~~d~d~dg~i--~~~ef~~~l 433 (441)
.+|+.+|.+++|.| +++||+.++
T Consensus 676 ~~F~~~D~d~~G~It~~~~efl~~~ 700 (900)
T 1qxp_A 676 KIFKQLDPENTGTIQLDLISWLSFS 700 (900)
T ss_dssp HHHHHSCSSCCSCEEEEHHHHHHHT
T ss_pred HHHHhhCCCCCceEEecHHHHHHHh
Confidence 99999999999988 458988765
No 256
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=99.46 E-value=6.1e-13 Score=109.93 Aligned_cols=103 Identities=21% Similarity=0.312 Sum_probs=90.5
Q ss_pred CHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHh
Q psy2947 283 TLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHT 362 (441)
Q Consensus 283 ~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~ 362 (441)
+..++..++...+ .+++|.++++||...+..........+.++.+|+.||.|++|+|+.+||+.++..
T Consensus 44 ~~~~~~~~~~~~d------------~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~ 111 (148)
T 2lmt_A 44 TEAELQDLIAEAE------------NNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMIN 111 (148)
T ss_dssp CHHHHHHHHHHHH------------TTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHHHSSCSSEECHHHHHHHHHH
T ss_pred hHHHHHHHHHhcc------------cCCCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHH
Confidence 6677777766543 6889999999999999887777777899999999999999999999999999987
Q ss_pred hccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 363 HSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 363 ~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
. +.....+++..+|+.+|.|+||.|+++||.++|.
T Consensus 112 ~-g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~ 146 (148)
T 2lmt_A 112 L-GEKVTDEEIDEMIREADFDGDGMINYEEFVWMIS 146 (148)
T ss_dssp H-TCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHT
T ss_pred c-CccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 7 4556678999999999999999999999999884
No 257
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=99.46 E-value=2.9e-13 Score=111.17 Aligned_cols=135 Identities=33% Similarity=0.545 Sum_probs=116.3
Q ss_pred ccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCCCHHH
Q psy2947 262 KTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIPKE 335 (441)
Q Consensus 262 ~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~~~~~ 335 (441)
+.++.+++++|..+|.+ |.| +.+|+..+++.++..++..++..++. +++|.|+++||..++..........+.
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~I-~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~ 80 (143)
T 2obh_A 2 EEQKQEIREAFDLFDADGTGTI-DVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEE 80 (143)
T ss_dssp HHHHHHHHHHHHTTCTTCCSEE-EGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcC-cHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHH
Confidence 45678899999999986 888 89999999999999999999888775 578999999999988754322233567
Q ss_pred HHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 336 VVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 336 ~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
++.+|+.||.|++|.|+.+||+.++... +.....+++..+|+.+|.|++|.|+++||.++|.
T Consensus 81 l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 81 ILKAFKLFDDDETGKISFKNLKRVAKEL-GENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHHT-TCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 9999999999999999999999999876 3456678999999999999999999999999873
No 258
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.45 E-value=2.3e-13 Score=137.28 Aligned_cols=119 Identities=22% Similarity=0.198 Sum_probs=94.0
Q ss_pred CCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEccCCCCCccchhhcCCCCCCEEEccC
Q psy2947 82 TVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLDALPGFLLSMPQLDTVYRHG 161 (441)
Q Consensus 82 ~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~ 161 (441)
.|+.|+|++|.|+.+|. |+.+++|+.|++++|.|+ .+|..++.+++|+.|+|++|+|+.+| .++.+++|+.|+|++
T Consensus 442 ~L~~L~Ls~n~l~~lp~-~~~l~~L~~L~Ls~N~l~--~lp~~~~~l~~L~~L~Ls~N~l~~lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 442 DVRVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLR--ALPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCN 517 (567)
T ss_dssp TCSEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCC--CCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCS
T ss_pred CceEEEecCCCCCCCcC-ccccccCcEeecCccccc--ccchhhhcCCCCCEEECCCCCCCCCc-ccCCCCCCcEEECCC
Confidence 58888888888888886 888888888999888887 88888888888888999888888888 788888888888888
Q ss_pred CcCccCcccccccccc-cccccccchhHHH-HhhcccccCCchhh----hhhhhcccc
Q psy2947 162 NHNYFKSTFMWYHSDI-HARIRSTSTRDEV-LRKQKKLHQPSRLQ----DLAVQSVIA 213 (441)
Q Consensus 162 N~~~~~~~~~~~~~~~-p~~l~~l~~~~~~-l~~~~~~~~p~~l~----~l~~l~~l~ 213 (441)
|.+.. .. |..+..++.+..+ +.+|.+..+|+.+. .+++|+.|+
T Consensus 518 N~l~~---------~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 518 NRLQQ---------SAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp SCCCS---------SSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred CCCCC---------CCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccC
Confidence 88522 22 6777778777777 88888877765433 355666653
No 259
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.45 E-value=1.9e-13 Score=129.76 Aligned_cols=149 Identities=15% Similarity=0.214 Sum_probs=116.8
Q ss_pred CCCCCcccEEeccCCCcC--cccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEE
Q psy2947 57 PQYFSHAFLLSLSYTPIG--RRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHL 134 (441)
Q Consensus 57 ~~~l~~L~~l~l~~n~i~--~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 134 (441)
...+++|+.|++++|.+. ..+..+++|+.|++++|.++.++. +..+++|+.|++++|.++ .+|. +..+++|++|
T Consensus 173 ~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~--~~~~-~~~l~~L~~L 248 (347)
T 4fmz_A 173 IANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKIT--DLSP-LANLSQLTWL 248 (347)
T ss_dssp GGGCTTCSEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCC--CCGG-GTTCTTCCEE
T ss_pred hccCCCCCEEEccCCcccccccccCCCccceeecccCCCCCCch-hhcCCcCCEEEccCCccC--CCcc-hhcCCCCCEE
Confidence 345789999999999553 226778899999999999987765 888999999999999997 6665 8889999999
Q ss_pred EccCCCCCccchhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccC-Cchhhhhhhhccc
Q psy2947 135 YLDNNLLDALPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQ-PSRLQDLAVQSVI 212 (441)
Q Consensus 135 ~l~~n~l~~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~-p~~l~~l~~l~~l 212 (441)
++++|.++.++ .+..+++|+.|++++|.+... ..+..++.+..+ +++|.+... |..+..+++|+.+
T Consensus 249 ~l~~n~l~~~~-~~~~l~~L~~L~l~~n~l~~~-----------~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 316 (347)
T 4fmz_A 249 EIGTNQISDIN-AVKDLTKLKMLNVGSNQISDI-----------SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTL 316 (347)
T ss_dssp ECCSSCCCCCG-GGTTCTTCCEEECCSSCCCCC-----------GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEE
T ss_pred ECCCCccCCCh-hHhcCCCcCEEEccCCccCCC-----------hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEE
Confidence 99999998875 577889999999999986432 234455555556 777777544 4567888889999
Q ss_pred ccccccCCC
Q psy2947 213 ASKENFFEP 221 (441)
Q Consensus 213 ~l~~n~~~~ 221 (441)
++++|++..
T Consensus 317 ~L~~n~l~~ 325 (347)
T 4fmz_A 317 FLSQNHITD 325 (347)
T ss_dssp ECCSSSCCC
T ss_pred EccCCcccc
Confidence 999887664
No 260
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.45 E-value=4.2e-14 Score=140.50 Aligned_cols=132 Identities=17% Similarity=0.105 Sum_probs=93.4
Q ss_pred CCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEccCCCCCcc-chhhc-CCCCCCEEE
Q psy2947 81 DTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLDAL-PGFLL-SMPQLDTVY 158 (441)
Q Consensus 81 ~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~l-p~~~~-~l~~L~~L~ 158 (441)
++|+.|++++|.++.+|.. .+++|+.|++++|.++ +..|..++.+++|++|+|++|.|+.+ |..+. .+++|+.|+
T Consensus 99 ~~L~~L~L~~N~l~~~~~~--~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~ 175 (487)
T 3oja_A 99 PSIETLHAANNNISRVSCS--RGQGKKNIYLANNKIT-MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (487)
T ss_dssp TTCCEEECCSSCCCCEEEC--CCSSCEEEECCSSCCC-SGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECcCCcCCCCCcc--ccCCCCEEECCCCCCC-CCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEe
Confidence 3444444444555444332 3577888888888887 55566778888889999998888764 55554 688889999
Q ss_pred ccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhcccccccccCCCCCCCchh
Q psy2947 159 RHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIASKENFFEPGLFPGPL 228 (441)
Q Consensus 159 l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~l~~n~~~~~~~p~~~ 228 (441)
|++|.+... |. ...++.+..+ +++|.+..+|+.+..++.|+.|++++|.+.. +|..+
T Consensus 176 Ls~N~l~~~----------~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~--lp~~l 233 (487)
T 3oja_A 176 LQYNFIYDV----------KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL--IEKAL 233 (487)
T ss_dssp CTTSCCCEE----------EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE--ECTTC
T ss_pred cCCCccccc----------cc-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc--cchhh
Confidence 998886432 11 2235555556 7888898888889999999999999998764 66554
No 261
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=99.44 E-value=4e-13 Score=104.92 Aligned_cols=100 Identities=19% Similarity=0.256 Sum_probs=82.2
Q ss_pred CcCHHHHHHHHH--hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhc--cCCCChHH
Q psy2947 297 SPTIAELKKYLA--EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHS--KAEDIPKE 372 (441)
Q Consensus 297 ~~~~~~~~~~~~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~--~~~~~~~~ 372 (441)
.++..++..++. +++|.|+++||..++.. .....+.++.+|+.+|.|++|.|+.+||..++.... ......++
T Consensus 6 ~~t~~e~~~~~~~~d~~g~i~~~ef~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~ 82 (110)
T 1pva_A 6 LLKADDIKKALDAVKAEGSFNHKKFFALVGL---KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAE 82 (110)
T ss_dssp HSCHHHHHHHHHHTCSTTCCCHHHHHHHHTC---TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHH
T ss_pred cCCHHHHHHHHHhcCCCCcCcHHHHHHHHcc---CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCCHHH
Confidence 344555555554 37899999999999852 245678999999999999999999999999998763 34456789
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 373 VVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 373 ~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
++.+|+.+|.+++|.|+++||.+++..
T Consensus 83 ~~~~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 83 TKAFLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 999999999999999999999998863
No 262
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=99.44 E-value=3.3e-13 Score=105.21 Aligned_cols=99 Identities=15% Similarity=0.265 Sum_probs=81.8
Q ss_pred cCHHHHHHHHH--hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhc--cCCCChHHH
Q psy2947 298 PTIAELKKYLA--EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHS--KAEDIPKEV 373 (441)
Q Consensus 298 ~~~~~~~~~~~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~--~~~~~~~~~ 373 (441)
++..++..++. +++|.|+++||..++... ....+.++.+|+.+|.|++|.|+.+||..++.... ......+++
T Consensus 6 ~t~~e~~~~~~~~d~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~ 82 (109)
T 1rwy_A 6 LSAEDIKKAIGAFTAADSFDHKKFFQMVGLK---KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKET 82 (109)
T ss_dssp SCHHHHHHHHHTTCSTTCCCHHHHHHHHTGG---GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHH
T ss_pred CCHHHHHHHHHHcCCCCcEeHHHHHHHHhcC---cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCHHHH
Confidence 34445555544 378999999999998532 35678999999999999999999999999998873 344567889
Q ss_pred HHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 374 VDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 374 ~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
+.+|+.+|.+++|.|+++||.+++..
T Consensus 83 ~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 83 KTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp HHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred HHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 99999999999999999999998863
No 263
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.44 E-value=5.4e-14 Score=128.14 Aligned_cols=144 Identities=18% Similarity=0.164 Sum_probs=121.9
Q ss_pred CCcccEEeccCCCcCc--ccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEcc
Q psy2947 60 FSHAFLLSLSYTPIGR--RIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLD 137 (441)
Q Consensus 60 l~~L~~l~l~~n~i~~--~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~ 137 (441)
+.++..++++.|.+.. .+..+++|+.|++++|.++.+| .+..+++|+.|++++|+++ .+|. +..+++|++|+++
T Consensus 18 l~~l~~l~l~~~~i~~~~~~~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~L~~N~i~--~~~~-l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQSLA-GMQFFTNLKELHLSHNQIS--DLSP-LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHHHTCSCTTSEECHHHHTTCSEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCC--CCGG-GTTCSSCCEEECC
T ss_pred HHHHHHHHhcCCCcccccchhhcCcCcEEECcCCCcccch-HHhhCCCCCEEECCCCccC--CChh-hccCCCCCEEECC
Confidence 5667778888886542 4567899999999999999998 7999999999999999998 6776 9999999999999
Q ss_pred CCCCCccchhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhccccccc
Q psy2947 138 NNLLDALPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIASKE 216 (441)
Q Consensus 138 ~n~l~~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~l~~ 216 (441)
+|+++.+|.... ++|+.|++++|.+... ..+..++.+..+ +++|.+..+| .+..++.|+.|++++
T Consensus 94 ~N~l~~l~~~~~--~~L~~L~L~~N~l~~~-----------~~l~~l~~L~~L~Ls~N~i~~~~-~l~~l~~L~~L~L~~ 159 (263)
T 1xeu_A 94 RNRLKNLNGIPS--ACLSRLFLDNNELRDT-----------DSLIHLKNLEILSIRNNKLKSIV-MLGFLSKLEVLDLHG 159 (263)
T ss_dssp SSCCSCCTTCCC--SSCCEEECCSSCCSBS-----------GGGTTCTTCCEEECTTSCCCBCG-GGGGCTTCCEEECTT
T ss_pred CCccCCcCcccc--CcccEEEccCCccCCC-----------hhhcCcccccEEECCCCcCCCCh-HHccCCCCCEEECCC
Confidence 999999986433 8999999999997432 236666777777 8889998887 799999999999999
Q ss_pred ccCCC
Q psy2947 217 NFFEP 221 (441)
Q Consensus 217 n~~~~ 221 (441)
|.+..
T Consensus 160 N~i~~ 164 (263)
T 1xeu_A 160 NEITN 164 (263)
T ss_dssp SCCCB
T ss_pred CcCcc
Confidence 98765
No 264
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.43 E-value=4.1e-13 Score=137.87 Aligned_cols=170 Identities=15% Similarity=0.125 Sum_probs=131.9
Q ss_pred CCCCcccEEeccCCC----c-CcccCCCCCCCEEEccCCCCCcCC-cCccCCCCCcEEEccCCcCCCCCCchhhhcCCCC
Q psy2947 58 QYFSHAFLLSLSYTP----I-GRRIFKCDTVEVLSLKSNSLTSLP-PDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNL 131 (441)
Q Consensus 58 ~~l~~L~~l~l~~n~----i-~~~~~~l~~L~~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L 131 (441)
..+++|+.++++.+. . +..+..+++++.++++.|.+..++ ..+..+++|+.|++++|.+..+.+|..+..+++|
T Consensus 417 ~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L 496 (635)
T 4g8a_A 417 LGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNL 496 (635)
T ss_dssp TTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC
T ss_pred cccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhcccc
Confidence 346777888887762 1 234567888999999999998554 4488899999999999975423467778899999
Q ss_pred CEEEccCCCCCcc-chhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccC-Cchhhhh-h
Q psy2947 132 THLYLDNNLLDAL-PGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQ-PSRLQDL-A 207 (441)
Q Consensus 132 ~~L~l~~n~l~~l-p~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~-p~~l~~l-~ 207 (441)
++|+|++|+|+.+ |..|.++++|+.|+|++|++... .|..+..++.+..+ +++|.+..+ |..+..+ +
T Consensus 497 ~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l---------~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 567 (635)
T 4g8a_A 497 TFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL---------DTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPS 567 (635)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBC---------CCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCT
T ss_pred CEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCC---------ChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhC
Confidence 9999999999877 47788999999999999986432 24567777777777 888988666 4567777 6
Q ss_pred hhcccccccccCCCCCCCchhhhHHHhhh
Q psy2947 208 VQSVIASKENFFEPGLFPGPLVDYIAREY 236 (441)
Q Consensus 208 ~l~~l~l~~n~~~~~~~p~~~~~~l~~~~ 236 (441)
+|+.+++++|+|.|.+--.++.+|+....
T Consensus 568 ~L~~L~L~~Np~~C~C~~~~~~~wl~~~~ 596 (635)
T 4g8a_A 568 SLAFLNLTQNDFACTCEHQSFLQWIKDQR 596 (635)
T ss_dssp TCCEEECTTCCBCCSGGGHHHHHHHHHTT
T ss_pred cCCEEEeeCCCCcccCCcHHHHHHHHhCC
Confidence 89999999999998765566777776544
No 265
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.43 E-value=7e-14 Score=131.11 Aligned_cols=131 Identities=16% Similarity=0.103 Sum_probs=78.2
Q ss_pred CCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEccCCCCCccc-hhh-cCCCCCCEEE
Q psy2947 81 DTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLDALP-GFL-LSMPQLDTVY 158 (441)
Q Consensus 81 ~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~lp-~~~-~~l~~L~~L~ 158 (441)
++|+.|++++|+++.++.. .+++|++|++++|.++ +..|..+..+++|++|++++|.++.++ ..+ ..+++|++|+
T Consensus 99 ~~L~~L~l~~n~l~~~~~~--~~~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 175 (317)
T 3o53_A 99 PSIETLHAANNNISRVSCS--RGQGKKNIYLANNKIT-MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (317)
T ss_dssp TTCCEEECCSSCCSEEEEC--CCSSCEEEECCSSCCC-SGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECCCCccCCcCcc--ccCCCCEEECCCCCCC-CccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEE
Confidence 4444444444555443322 2456777777777776 333335666777777777777776553 333 3567777777
Q ss_pred ccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhcccccccccCCCCCCCch
Q psy2947 159 RHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIASKENFFEPGLFPGP 227 (441)
Q Consensus 159 l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~l~~n~~~~~~~p~~ 227 (441)
+++|.+... +. ...++.+..+ +++|.+..+|+.+..++.|+.+++++|.+.. +|..
T Consensus 176 L~~N~l~~~----------~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~--l~~~ 232 (317)
T 3o53_A 176 LQYNFIYDV----------KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL--IEKA 232 (317)
T ss_dssp CTTSCCCEE----------EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE--ECTT
T ss_pred CCCCcCccc----------cc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCcccc--hhhH
Confidence 777775332 11 1124444445 6677777777777777888888888776653 5543
No 266
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=99.43 E-value=4.8e-13 Score=104.14 Aligned_cols=98 Identities=16% Similarity=0.212 Sum_probs=80.6
Q ss_pred cCHHHHHHHHH--hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhc--cCCCChHHH
Q psy2947 298 PTIAELKKYLA--EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHS--KAEDIPKEV 373 (441)
Q Consensus 298 ~~~~~~~~~~~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~--~~~~~~~~~ 373 (441)
++..++..++. +++|.|+++||..++... ....+.++.+|+.+|.|++|.|+.+||..++.... ......+++
T Consensus 6 ~t~~e~~~~~~~~d~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~ 82 (108)
T 1rro_A 6 LSAEDIAAALQECQDPDTFEPQKFFQTSGLS---KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESET 82 (108)
T ss_dssp SCHHHHHHHHHHTCSTTCCCHHHHHHHHSGG---GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHH
T ss_pred CCHHHHHHHHHHccCCCCcCHHHHHHHHhcC---cccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCCHHHH
Confidence 44444444443 378999999999988532 34678899999999999999999999999998773 344567899
Q ss_pred HHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 374 VDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 374 ~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
+.+|+.+|.+++|.|+++||..+++
T Consensus 83 ~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 83 KSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp HHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 9999999999999999999999874
No 267
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=99.43 E-value=9.7e-13 Score=123.55 Aligned_cols=119 Identities=24% Similarity=0.355 Sum_probs=96.7
Q ss_pred chHHHHHhhhccccCCCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhh
Q psy2947 264 PYLEFRECFFLFARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAA 343 (441)
Q Consensus 264 ~~~~l~~~f~~~d~~G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~ 343 (441)
...+++.++..+ |...+.+++..+++.++ .+++|.|+|+||+.++..........++++++|+.|
T Consensus 320 S~eELk~aLrsL---G~~~TeeEI~~Lf~~~D------------~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk~f 384 (440)
T 3u0k_A 320 TTKELGTVMRSL---GQNPTEAELQDMINEVD------------ADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVF 384 (440)
T ss_dssp CHHHHHHHHHHT---TCCCCHHHHHHHHHHHC------------SSCSSSEEHHHHHHHHHTC------CHHHHHHHHHH
T ss_pred CHHHHHHHHHHc---CCCCCHHHHHHHHHHhC------------CCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHH
Confidence 355666666444 43337889999988876 789999999999999987666666778999999999
Q ss_pred cCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 344 DTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 344 D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
|.|++|.|+.+||++++..+ .....+++++.+|+.+|.|+||.|+++||.++|.
T Consensus 385 DkDgdG~IS~eELr~vL~~l-Ge~LSdeEIdeLfke~D~DgDGkIsyeEFvkmMt 438 (440)
T 3u0k_A 385 DKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 438 (440)
T ss_dssp CTTCSSEECHHHHHHHHHHH-TCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHC
T ss_pred CCCCcCcCCHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHhC
Confidence 99999999999999999877 4556688999999999999999999999999884
No 268
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=99.43 E-value=2.2e-13 Score=103.98 Aligned_cols=65 Identities=22% Similarity=0.359 Sum_probs=61.7
Q ss_pred hHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 370 PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 370 ~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
.++++.+|+.+|+|++|+|+.+||+.+++.+|..+++++++.+++.+|.|++|.|+|+||+++|.
T Consensus 35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m~ 99 (100)
T 2lv7_A 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLG 99 (100)
T ss_dssp HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHhC
Confidence 35788999999999999999999999999999999999999999999999999999999999874
No 269
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=99.42 E-value=1.9e-13 Score=111.02 Aligned_cols=98 Identities=10% Similarity=0.121 Sum_probs=67.9
Q ss_pred HHHHHhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCC
Q psy2947 304 KKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTT 383 (441)
Q Consensus 304 ~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~ 383 (441)
..++.+++|.|+++||..++..........+.++.+|+.||.|++|.|+.+||..++..........++++.+|+.+|.|
T Consensus 10 ~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~D~d 89 (135)
T 3h4s_E 10 LETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLD 89 (135)
T ss_dssp ---------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHHHCSS
T ss_pred HHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCC
Confidence 34447899999999999998765443344678999999999999999999999999987732356688999999999999
Q ss_pred CCCcccHHHHHHHHHHhC
Q psy2947 384 KSGTVPAKYLKHVLVNWG 401 (441)
Q Consensus 384 ~~G~is~~ef~~~l~~~~ 401 (441)
++|.|+++||.+++....
T Consensus 90 ~dG~I~~~EF~~~~~~~~ 107 (135)
T 3h4s_E 90 GDGALNQTEFCVLMVRLS 107 (135)
T ss_dssp CSSSBCHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHhC
Confidence 999999999999998753
No 270
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.42 E-value=1.1e-12 Score=133.37 Aligned_cols=34 Identities=12% Similarity=0.169 Sum_probs=27.1
Q ss_pred hHHH-HhhcccccCCchhhhhhhhcccccccccCC
Q psy2947 187 RDEV-LRKQKKLHQPSRLQDLAVQSVIASKENFFE 220 (441)
Q Consensus 187 ~~~~-l~~~~~~~~p~~l~~l~~l~~l~l~~n~~~ 220 (441)
+..+ +.+|.+..+|..+..+++|+.|++++|++.
T Consensus 263 L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N~l~ 297 (622)
T 3g06_A 263 LLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLS 297 (622)
T ss_dssp CCEEECCSSCCCSCCGGGGGSCTTCEEECCSCCCC
T ss_pred CcEEeCCCCCCCcCCHHHhhccccCEEEecCCCCC
Confidence 3334 677888888888888999999999988765
No 271
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.41 E-value=5.4e-13 Score=141.61 Aligned_cols=154 Identities=17% Similarity=0.124 Sum_probs=119.5
Q ss_pred CCCCCcccEEeccCC----Cc-CcccCCCCCCCEEEccCCCCCcC-CcCccCCCCCcEEEccCCcCCCCCCchh--hhcC
Q psy2947 57 PQYFSHAFLLSLSYT----PI-GRRIFKCDTVEVLSLKSNSLTSL-PPDIGRLTNLRVLCLTDNCLQNASIPFT--LTFC 128 (441)
Q Consensus 57 ~~~l~~L~~l~l~~n----~i-~~~~~~l~~L~~L~l~~n~l~~l-p~~~~~l~~L~~L~l~~n~l~~~~~p~~--~~~l 128 (441)
+..+++|+.|+|++| .| |..+.++++|++|+|++|.++.+ |..|..+++|++|++++|.++ +.+|.. +..+
T Consensus 44 ~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~~~L 122 (844)
T 3j0a_A 44 FPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLS-DAVLKDGYFRNL 122 (844)
T ss_dssp CSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCS-SCCSTTCCCSSC
T ss_pred CcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCC-cccccCcccccc
Confidence 456899999999999 33 56788999999999999999965 677999999999999999998 556665 8999
Q ss_pred CCCCEEEccCCCCCccc--hhhcCCCCCCEEEccCCcCccCccccccccccccccccc--chhHHH-Hhhccc-ccCCch
Q psy2947 129 KNLTHLYLDNNLLDALP--GFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRST--STRDEV-LRKQKK-LHQPSR 202 (441)
Q Consensus 129 ~~L~~L~l~~n~l~~lp--~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l--~~~~~~-l~~~~~-~~~p~~ 202 (441)
++|++|+|++|.+..++ ..|+++++|+.|++++|.+... .+..+..+ +.+..+ +..|.+ ...|..
T Consensus 123 ~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~---------~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~ 193 (844)
T 3j0a_A 123 KALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV---------CEHELEPLQGKTLSFFSLAANSLYSRVSVD 193 (844)
T ss_dssp SSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC---------CSGGGHHHHHCSSCCCEECCSBSCCCCCCC
T ss_pred CCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCee---------CHHHcccccCCccceEECCCCccccccccc
Confidence 99999999999997663 5799999999999999996432 24444443 334444 555555 334544
Q ss_pred hhhhhh------hcccccccccCC
Q psy2947 203 LQDLAV------QSVIASKENFFE 220 (441)
Q Consensus 203 l~~l~~------l~~l~l~~n~~~ 220 (441)
+..+.. |+.+++++|.+.
T Consensus 194 ~~~~~~~~~~~~L~~L~Ls~n~l~ 217 (844)
T 3j0a_A 194 WGKCMNPFRNMVLEILDVSGNGWT 217 (844)
T ss_dssp CCSSSCTTTTCCBSEEBCSSCCSS
T ss_pred hhhcCCccccCceeEEecCCCcCc
Confidence 444443 888889888654
No 272
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.41 E-value=1.1e-12 Score=110.99 Aligned_cols=119 Identities=26% Similarity=0.265 Sum_probs=95.0
Q ss_pred CCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEccCCCCCccch-hhcCCCCCCEEEcc
Q psy2947 82 TVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLDALPG-FLLSMPQLDTVYRH 160 (441)
Q Consensus 82 ~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~l~ 160 (441)
..+.+++++|.++.+|..+. ++|+.|++++|.|+ +..|..+..+++|++|+|++|+|+.+|. .|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~-~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQIT-KLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCC-ccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 35899999999999998874 89999999999998 4557778999999999999999999984 56899999999999
Q ss_pred CCcCccCcccccccccccccccccchhHHHHhhcccccCCc-hhhhhhhhcccccccccCCCCCC-CchhhhHHHhh
Q psy2947 161 GNHNYFKSTFMWYHSDIHARIRSTSTRDEVLRKQKKLHQPS-RLQDLAVQSVIASKENFFEPGLF-PGPLVDYIARE 235 (441)
Q Consensus 161 ~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~l~~~~~~~~p~-~l~~l~~l~~l~l~~n~~~~~~~-p~~~~~~l~~~ 235 (441)
+|++. .+|+ .+..+++|+.|++++|++.+..- -..+..|+...
T Consensus 87 ~N~l~--------------------------------~~~~~~~~~l~~L~~L~L~~N~~~c~c~~l~~l~~~l~~~ 131 (170)
T 3g39_A 87 DNQLK--------------------------------SIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLSRWISQH 131 (170)
T ss_dssp SSCCC--------------------------------CCCTTTTTTCTTCCEEECCSSCBCTTBGGGHHHHHHHHHC
T ss_pred CCccC--------------------------------EeCHHHhcCCCCCCEEEeCCCCCCCCchhHHHHHHHHHhC
Confidence 99952 2332 46677888999999999886421 12344455443
No 273
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.39 E-value=1.6e-12 Score=123.42 Aligned_cols=100 Identities=21% Similarity=0.196 Sum_probs=54.0
Q ss_pred CCcccEEeccCCCc---CcccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEc
Q psy2947 60 FSHAFLLSLSYTPI---GRRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYL 136 (441)
Q Consensus 60 l~~L~~l~l~~n~i---~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l 136 (441)
+++|+.|++++|.+ +. +..+++|++|++++|.++.+| .+..+++|++|++++|.++ .+|. +..+++|++|++
T Consensus 65 ~~~L~~L~l~~n~i~~~~~-~~~l~~L~~L~L~~n~i~~~~-~~~~l~~L~~L~l~~n~i~--~~~~-~~~l~~L~~L~l 139 (347)
T 4fmz_A 65 LTNLEYLNLNGNQITDISP-LSNLVKLTNLYIGTNKITDIS-ALQNLTNLRELYLNEDNIS--DISP-LANLTKMYSLNL 139 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCG-GGTTCTTCSEEECTTSCCC--CCGG-GTTCTTCCEEEC
T ss_pred cCCccEEEccCCccccchh-hhcCCcCCEEEccCCcccCch-HHcCCCcCCEEECcCCccc--Cchh-hccCCceeEEEC
Confidence 55566666666532 22 455566666666666655543 3555666666666666655 4443 555555566666
Q ss_pred cCCCCCccchhhcCCCCCCEEEccCCcC
Q psy2947 137 DNNLLDALPGFLLSMPQLDTVYRHGNHN 164 (441)
Q Consensus 137 ~~n~l~~lp~~~~~l~~L~~L~l~~N~~ 164 (441)
++|.....+..+..+++|+.|++++|.+
T Consensus 140 ~~n~~~~~~~~~~~l~~L~~L~l~~~~~ 167 (347)
T 4fmz_A 140 GANHNLSDLSPLSNMTGLNYLTVTESKV 167 (347)
T ss_dssp TTCTTCCCCGGGTTCTTCCEEECCSSCC
T ss_pred CCCCCcccccchhhCCCCcEEEecCCCc
Confidence 5553322222355555555555555554
No 274
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.39 E-value=2.1e-12 Score=109.72 Aligned_cols=104 Identities=24% Similarity=0.314 Sum_probs=88.8
Q ss_pred CCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEccCCCCCccch-hhcCCCCCCEEEccC
Q psy2947 83 VEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLDALPG-FLLSMPQLDTVYRHG 161 (441)
Q Consensus 83 L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~l~~ 161 (441)
-+.+++++|+++.+|..+. ++|+.|++++|+|+ +..|..+..+++|++|+|++|+|+.+|. .|..+++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLASVPAGIP--TDKQRLWLNNNQIT-KLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCSSCCSCCC--TTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCCccCCCcC--CCCcEEEeCCCCcc-ccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 3789999999999999875 89999999999998 5557788999999999999999999985 468999999999999
Q ss_pred CcCccCcccccccccccccccccchhHHHHhhcccccCCc-hhhhhhhhcccccccccCCC
Q psy2947 162 NHNYFKSTFMWYHSDIHARIRSTSTRDEVLRKQKKLHQPS-RLQDLAVQSVIASKENFFEP 221 (441)
Q Consensus 162 N~~~~~~~~~~~~~~~p~~l~~l~~~~~~l~~~~~~~~p~-~l~~l~~l~~l~l~~n~~~~ 221 (441)
|++. .+|+ .+..+++|+.+++++|++.+
T Consensus 91 N~l~--------------------------------~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLK--------------------------------SIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCC--------------------------------CCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred Cccc--------------------------------eeCHHHhccccCCCEEEeCCCCccc
Confidence 9952 2332 36677888888999998876
No 275
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.39 E-value=1.1e-12 Score=129.13 Aligned_cols=149 Identities=17% Similarity=0.137 Sum_probs=78.7
Q ss_pred CCcccEEeccCCCcCc-ccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEccC
Q psy2947 60 FSHAFLLSLSYTPIGR-RIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDN 138 (441)
Q Consensus 60 l~~L~~l~l~~n~i~~-~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~ 138 (441)
+++|+.|++++|.+.. .+..+++|++|++++|.++.+| ++.+++|++|++++|.++ .+| ++.+++|++|++++
T Consensus 63 l~~L~~L~Ls~n~l~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~l~~L~~L~L~~N~l~--~l~--~~~l~~L~~L~l~~ 136 (457)
T 3bz5_A 63 LTGLTKLICTSNNITTLDLSQNTNLTYLACDSNKLTNLD--VTPLTKLTYLNCDTNKLT--KLD--VSQNPLLTYLNCAR 136 (457)
T ss_dssp CTTCSEEECCSSCCSCCCCTTCTTCSEEECCSSCCSCCC--CTTCTTCCEEECCSSCCS--CCC--CTTCTTCCEEECTT
T ss_pred cCCCCEEEccCCcCCeEccccCCCCCEEECcCCCCceee--cCCCCcCCEEECCCCcCC--eec--CCCCCcCCEEECCC
Confidence 4556666666663321 1455556666666666666553 555666666666666665 343 55556666666666
Q ss_pred CCCCccchhhcCCCCCCEEEccCCcCccCccccc-------------ccccccccccccchhHHH-HhhcccccCCchhh
Q psy2947 139 NLLDALPGFLLSMPQLDTVYRHGNHNYFKSTFMW-------------YHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQ 204 (441)
Q Consensus 139 n~l~~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~-------------~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~ 204 (441)
|+++.++ ++.+++|+.|++++|+....-.+.. + ..+| +..++.+..+ +.+|.+..++ +.
T Consensus 137 N~l~~l~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l-~~l~--l~~l~~L~~L~l~~N~l~~~~--l~ 209 (457)
T 3bz5_A 137 NTLTEID--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKI-TELD--VSQNKLLNRLNCDTNNITKLD--LN 209 (457)
T ss_dssp SCCSCCC--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCC-CCCC--CTTCTTCCEEECCSSCCSCCC--CT
T ss_pred Cccceec--cccCCcCCEEECCCCCcccccccccCCcCCEEECCCCcc-ceec--cccCCCCCEEECcCCcCCeec--cc
Confidence 6655553 4445555555555553110000000 0 1122 3344444444 5566665553 66
Q ss_pred hhhhhcccccccccCCC
Q psy2947 205 DLAVQSVIASKENFFEP 221 (441)
Q Consensus 205 ~l~~l~~l~l~~n~~~~ 221 (441)
.++.|+.|++++|.+..
T Consensus 210 ~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 210 QNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp TCTTCSEEECCSSCCSC
T ss_pred cCCCCCEEECcCCcccc
Confidence 77778888888777654
No 276
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=99.39 E-value=1.2e-12 Score=108.05 Aligned_cols=137 Identities=33% Similarity=0.543 Sum_probs=118.5
Q ss_pred ecccchHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCCCH
Q psy2947 260 TFKTPYLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIP 333 (441)
Q Consensus 260 l~~~~~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~~~ 333 (441)
+++.++.++++.|..+|.+ |.| +..++..+++.++..++..++..++. +++|.|+++||..++..........
T Consensus 4 l~~~~~~~l~~~F~~~D~d~~G~i-~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 82 (148)
T 1exr_A 4 LTEEQIAEFKEAFALFDKDGDGTI-TTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE 82 (148)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSEE-CHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcC-cHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcH
Confidence 5677889999999999986 788 89999999999999999888887764 6889999999999887543322345
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
+.+..+|+.+|.|++|.|+.+||+.++... +.....+++..+|+.+|.|++|.|+++||.++|.
T Consensus 83 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1exr_A 83 EELIEAFKVFDRDGNGLISAAELRHVMTNL-GEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 146 (148)
T ss_dssp HHHHHHHHHHSTTCSSCBCHHHHHHHHHHT-TCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 678999999999999999999999999876 4456678999999999999999999999999885
No 277
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=99.39 E-value=1.9e-13 Score=101.84 Aligned_cols=86 Identities=26% Similarity=0.384 Sum_probs=70.9
Q ss_pred CCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcee
Q psy2947 346 TKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVR 425 (441)
Q Consensus 346 d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~ 425 (441)
|++|.|+++| .++.... .....+.++.+|+.+|.+++|.|+.+||+.+++.+|.++++++++.+++.+|.+++|.|+
T Consensus 1 ~~~G~i~~~e--~~~~~~l-~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~ 77 (87)
T 1s6j_A 1 HSSGHIDDDD--KHMAERL-SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTID 77 (87)
T ss_dssp CCSSSSSSHH--HHSSSSS-CSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEEC
T ss_pred CCCCccCccH--HHHHHHC-CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCc
Confidence 4678888888 2222221 122235688899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHh
Q psy2947 426 YEDFVKIAC 434 (441)
Q Consensus 426 ~~ef~~~l~ 434 (441)
|+||+.++.
T Consensus 78 ~~eF~~~~~ 86 (87)
T 1s6j_A 78 YGEFIAATV 86 (87)
T ss_dssp HHHHTTCCC
T ss_pred HHHHHHHHh
Confidence 999987653
No 278
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.39 E-value=1.1e-12 Score=129.72 Aligned_cols=125 Identities=22% Similarity=0.223 Sum_probs=56.0
Q ss_pred CCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEccCCCCCccchhhcCCCCCCEEE
Q psy2947 79 KCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLDALPGFLLSMPQLDTVY 158 (441)
Q Consensus 79 ~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~ 158 (441)
.+++|+.|++++|.++.+++ +..+++|+.|++++|.++ .+|. +..+++|+.|++++|+++.++. +..+++|+.|+
T Consensus 241 ~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~--~~~~-~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~ 315 (466)
T 1o6v_A 241 SLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQIS--NISP-LAGLTALTNLELNENQLEDISP-ISNLKNLTYLT 315 (466)
T ss_dssp GCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCC--CCGG-GTTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEE
T ss_pred cCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccC--cccc-ccCCCccCeEEcCCCcccCchh-hcCCCCCCEEE
Confidence 34444444444444443332 444444444444444444 2332 4444444444444444444433 34444444444
Q ss_pred ccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhcccccccccCC
Q psy2947 159 RHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIASKENFFE 220 (441)
Q Consensus 159 l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~l~~n~~~ 220 (441)
+++|++.... | +..++.+..+ +.+|.+..++ .+..++.|+.+++++|.+.
T Consensus 316 L~~n~l~~~~---------~--~~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~~n~l~ 366 (466)
T 1o6v_A 316 LYFNNISDIS---------P--VSSLTKLQRLFFYNNKVSDVS-SLANLTNINWLSAGHNQIS 366 (466)
T ss_dssp CCSSCCSCCG---------G--GGGCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSCCC
T ss_pred CcCCcCCCch---------h--hccCccCCEeECCCCccCCch-hhccCCCCCEEeCCCCccC
Confidence 4444432211 1 2333333334 4455554443 4555566666666655543
No 279
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=99.39 E-value=2.6e-12 Score=107.44 Aligned_cols=119 Identities=18% Similarity=0.239 Sum_probs=98.1
Q ss_pred hHHHHHhhhccccCCCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhc
Q psy2947 265 YLEFRECFFLFARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAAD 344 (441)
Q Consensus 265 ~~~l~~~f~~~d~~G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D 344 (441)
..++..++..+ |...+..++..++..++ .+++|.|+++||..++..........+.+..+|+.+|
T Consensus 42 ~~e~~~~l~~~---~~~~~~~~~~~l~~~~d------------~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D 106 (161)
T 3fwb_A 42 YHELKVAMKAL---GFELPKREILDLIDEYD------------SEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFD 106 (161)
T ss_dssp HHHHHHHHHHT---TCCCCHHHHHHHHHHHC------------TTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHc---CCCCCHHHHHHHHHHhC------------cCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHHHHHHc
Confidence 44455555443 33336788888888766 6789999999999999876555566788999999999
Q ss_pred CCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 345 TTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 345 ~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
.|++|.|+.+||..++... ......+++..+|+.+|.+++|.|+++||.+++..
T Consensus 107 ~d~~G~i~~~el~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 160 (161)
T 3fwb_A 107 DDHTGKISIKNLRRVAKEL-GETLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160 (161)
T ss_dssp TTCSSEECHHHHHHHHHHT-TCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred CCCCCeEeHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 9999999999999999877 44556789999999999999999999999999864
No 280
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.39 E-value=1.5e-12 Score=132.34 Aligned_cols=56 Identities=25% Similarity=0.119 Sum_probs=25.9
Q ss_pred CCCcccEEeccCCCcCcccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCC
Q psy2947 59 YFSHAFLLSLSYTPIGRRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQ 117 (441)
Q Consensus 59 ~l~~L~~l~l~~n~i~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~ 117 (441)
.+++|+.|+|++|.|......+++|++|+|++|.++.+|. .+++|+.|++++|+++
T Consensus 79 ~l~~L~~L~Ls~N~l~~lp~~l~~L~~L~Ls~N~l~~l~~---~l~~L~~L~L~~N~l~ 134 (622)
T 3g06_A 79 LPPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPA---LPSGLCKLWIFGNQLT 134 (622)
T ss_dssp CCTTCCEEEECSCCCSCCCCCCTTCCEEEECSCCCCCCCC---CCTTCCEEECCSSCCS
T ss_pred cCCCCCEEEcCCCcCCcCCCCCCCCCEEECcCCcCCCCCC---CCCCcCEEECCCCCCC
Confidence 4555666666655332211144555555555555555444 2333444444444443
No 281
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=99.38 E-value=5.8e-13 Score=113.42 Aligned_cols=118 Identities=20% Similarity=0.335 Sum_probs=98.4
Q ss_pred hHHHHHhhhccccCCCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhc
Q psy2947 265 YLEFRECFFLFARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAAD 344 (441)
Q Consensus 265 ~~~l~~~f~~~d~~G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D 344 (441)
..++..++..+ |..++..++..++..++ .+++|.|+++||..++..........+.++.+|+.||
T Consensus 30 ~~El~~~l~~l---g~~~~~~~~~~~~~~~d------------~d~~~~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~fD 94 (176)
T 2lhi_A 30 SSELATVMRSL---GLSPSEAEVNDLMNEID------------VDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFD 94 (176)
T ss_dssp HHHHHHHHHHH---TCCCCHHHHHHHHTTTC------------SSCSSSBCTTHHHHHHTSSCCSSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHc---CCChhHHHHHHHHHHhC------------cCCCccchHHHHHHHHHHhcccCCcHHHHHHHHHHhC
Confidence 44555555433 44347788888888776 6889999999999998866555556788999999999
Q ss_pred CCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 345 TTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 345 ~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
.|++|+|+.+||+.++... .....+++++.+|+.+| |+||.|+++||.++|+.
T Consensus 95 ~d~~G~I~~~el~~~l~~~-g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k 147 (176)
T 2lhi_A 95 KNGDGLISAAELKHVLTSI-GEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK 147 (176)
T ss_dssp SSCSSSBCHHHHHHHHHTT-TCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTC
T ss_pred CCCCCcCcHHHHHHHHHHc-CcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHh
Confidence 9999999999999999876 45666889999999999 99999999999999975
No 282
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.38 E-value=1.1e-12 Score=129.15 Aligned_cols=150 Identities=19% Similarity=0.123 Sum_probs=117.0
Q ss_pred CCCcccEEeccCCCcC--cccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEc
Q psy2947 59 YFSHAFLLSLSYTPIG--RRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYL 136 (441)
Q Consensus 59 ~l~~L~~l~l~~n~i~--~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l 136 (441)
.+++|+.|++++|.+. +.+..+++|++|++++|+++.+| ++.+++|++|++++|.++ .+| ++.+++|++|++
T Consensus 40 ~l~~L~~L~Ls~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~~--~~~l~~L~~L~Ls~N~l~--~~~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 40 QLATLTSLDCHNSSITDMTGIEKLTGLTKLICTSNNITTLD--LSQNTNLTYLACDSNKLT--NLD--VTPLTKLTYLNC 113 (457)
T ss_dssp HHTTCCEEECCSSCCCCCTTGGGCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCS--CCC--CTTCTTCCEEEC
T ss_pred HcCCCCEEEccCCCcccChhhcccCCCCEEEccCCcCCeEc--cccCCCCCEEECcCCCCc--eee--cCCCCcCCEEEC
Confidence 3789999999999543 26788999999999999999986 899999999999999998 565 889999999999
Q ss_pred cCCCCCccchhhcCCCCCCEEEccCCcCccCccccc-------------ccccccccccccchhHHH-HhhcccccCCch
Q psy2947 137 DNNLLDALPGFLLSMPQLDTVYRHGNHNYFKSTFMW-------------YHSDIHARIRSTSTRDEV-LRKQKKLHQPSR 202 (441)
Q Consensus 137 ~~n~l~~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~-------------~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~ 202 (441)
++|+++.+| ++.+++|+.|++++|++.... +.. ..+.+ .+..++.+..+ +.+|.+..+|
T Consensus 114 ~~N~l~~l~--~~~l~~L~~L~l~~N~l~~l~-l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l~-- 186 (457)
T 3bz5_A 114 DTNKLTKLD--VSQNPLLTYLNCARNTLTEID-VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITELD-- 186 (457)
T ss_dssp CSSCCSCCC--CTTCTTCCEEECTTSCCSCCC-CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCCC--
T ss_pred CCCcCCeec--CCCCCcCCEEECCCCccceec-cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccceec--
Confidence 999999887 789999999999999975532 111 01111 23444444445 6667776666
Q ss_pred hhhhhhhcccccccccCCC
Q psy2947 203 LQDLAVQSVIASKENFFEP 221 (441)
Q Consensus 203 l~~l~~l~~l~l~~n~~~~ 221 (441)
+..++.|+.+++++|.+..
T Consensus 187 l~~l~~L~~L~l~~N~l~~ 205 (457)
T 3bz5_A 187 VSQNKLLNRLNCDTNNITK 205 (457)
T ss_dssp CTTCTTCCEEECCSSCCSC
T ss_pred cccCCCCCEEECcCCcCCe
Confidence 6677777777777776654
No 283
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=99.38 E-value=3e-12 Score=108.76 Aligned_cols=102 Identities=18% Similarity=0.173 Sum_probs=83.8
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHH----HHHhhccCCCChHHHH-----------HHHHHhCCCCCCcccHHHHHHHH
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLK----VMHTHSKAEDIPKEVV-----------DAFKAADTTKSGTVPAKYLKHVL 397 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~----~~~~~~~~~~~~~~~~-----------~~f~~~D~~~~G~is~~ef~~~l 397 (441)
..+++.+|+.+|.|++|.|+.+||.. ++... +.....+++. .+|+.+|.+++|.|+++||..++
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~-g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~~~~ 84 (176)
T 1nya_A 6 SDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAF-GKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVT 84 (176)
T ss_dssp HHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHT-SSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHc-CCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 35688999999999999999999999 45544 3333344444 89999999999999999999999
Q ss_pred HHhCCCCC--------HHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 398 VNWGEGLS--------SKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 398 ~~~~~~l~--------~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
........ .+.+..+|+.+|.|++|.|+++||..++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~ 130 (176)
T 1nya_A 85 ENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTA 130 (176)
T ss_dssp HHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHH
T ss_pred HHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 88654444 366899999999999999999999988753
No 284
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.38 E-value=1.2e-12 Score=129.52 Aligned_cols=147 Identities=18% Similarity=0.211 Sum_probs=123.1
Q ss_pred CCCCcccEEeccCCCcC--cccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEE
Q psy2947 58 QYFSHAFLLSLSYTPIG--RRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLY 135 (441)
Q Consensus 58 ~~l~~L~~l~l~~n~i~--~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~ 135 (441)
..+++|+.|++++|.+. ..+..+++|+.|++++|.++.+|+ +..+++|+.|++++|+++ .++. +..+++|+.|+
T Consensus 240 ~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~--~~~~-~~~l~~L~~L~ 315 (466)
T 1o6v_A 240 ASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLE--DISP-ISNLKNLTYLT 315 (466)
T ss_dssp GGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCS--CCGG-GGGCTTCSEEE
T ss_pred hcCCCCCEEECCCCccccchhhhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCccc--Cchh-hcCCCCCCEEE
Confidence 35778888898888543 237789999999999999998876 889999999999999998 5654 88999999999
Q ss_pred ccCCCCCccchhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCchhhhhhhhccccc
Q psy2947 136 LDNNLLDALPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPSRLQDLAVQSVIAS 214 (441)
Q Consensus 136 l~~n~l~~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~~l~~l~~l~~l~l 214 (441)
+++|+++.++. +..+++|+.|++++|++... ..+..++.+..+ +.+|.+...++ +..++.|+.+++
T Consensus 316 L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~-----------~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l 382 (466)
T 1o6v_A 316 LYFNNISDISP-VSSLTKLQRLFFYNNKVSDV-----------SSLANLTNINWLSAGHNQISDLTP-LANLTRITQLGL 382 (466)
T ss_dssp CCSSCCSCCGG-GGGCTTCCEEECCSSCCCCC-----------GGGTTCTTCCEEECCSSCCCBCGG-GTTCTTCCEEEC
T ss_pred CcCCcCCCchh-hccCccCCEeECCCCccCCc-----------hhhccCCCCCEEeCCCCccCccch-hhcCCCCCEEec
Confidence 99999988765 78899999999999996432 245566666666 78888877776 899999999999
Q ss_pred ccccCCC
Q psy2947 215 KENFFEP 221 (441)
Q Consensus 215 ~~n~~~~ 221 (441)
++|++..
T Consensus 383 ~~n~~~~ 389 (466)
T 1o6v_A 383 NDQAWTN 389 (466)
T ss_dssp CCEEEEC
T ss_pred cCCcccC
Confidence 9998875
No 285
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.38 E-value=1.3e-12 Score=110.49 Aligned_cols=106 Identities=25% Similarity=0.190 Sum_probs=93.7
Q ss_pred CCCCcccEEeccCCCcC--cccCCCCCCCEEEccCCCCCc-CCcCccCCCCCcEEEccCCcCCCCCCc--hhhhcCCCCC
Q psy2947 58 QYFSHAFLLSLSYTPIG--RRIFKCDTVEVLSLKSNSLTS-LPPDIGRLTNLRVLCLTDNCLQNASIP--FTLTFCKNLT 132 (441)
Q Consensus 58 ~~l~~L~~l~l~~n~i~--~~~~~l~~L~~L~l~~n~l~~-lp~~~~~l~~L~~L~l~~n~l~~~~~p--~~~~~l~~L~ 132 (441)
..+++|+.|++++|.+. ..+..+++|++|+|++|+++. +|..+..+++|+.|++++|.++ .+| ..+..+++|+
T Consensus 46 ~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~--~~~~~~~l~~l~~L~ 123 (168)
T 2ell_A 46 AEFVNLEFLSLINVGLISVSNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLK--DISTLEPLKKLECLK 123 (168)
T ss_dssp GGGGGCCEEEEESSCCCCCSSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCC--SSGGGGGGSSCSCCC
T ss_pred HhCCCCCEEeCcCCCCCChhhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccC--cchhHHHHhcCCCCC
Confidence 34789999999999554 567789999999999999997 6666778999999999999998 665 6789999999
Q ss_pred EEEccCCCCCccch----hhcCCCCCCEEEccCCcCc
Q psy2947 133 HLYLDNNLLDALPG----FLLSMPQLDTVYRHGNHNY 165 (441)
Q Consensus 133 ~L~l~~n~l~~lp~----~~~~l~~L~~L~l~~N~~~ 165 (441)
+|++++|.++.+|. .+..+++|+.|++++|.+.
T Consensus 124 ~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 124 SLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp EEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred EEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 99999999998886 7889999999999999863
No 286
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.38 E-value=2.1e-12 Score=127.02 Aligned_cols=103 Identities=22% Similarity=0.343 Sum_probs=72.8
Q ss_pred CCCCCCcccEEeccCCCcCcccCCC-CCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEE
Q psy2947 56 IPQYFSHAFLLSLSYTPIGRRIFKC-DTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHL 134 (441)
Q Consensus 56 ~~~~l~~L~~l~l~~n~i~~~~~~l-~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 134 (441)
+|..+++|+.|++++|.+.. +..+ ++|++|++++|+++.+| .|+.+++|++|++++|+++ .+|..+ .+|++|
T Consensus 106 lp~~~~~L~~L~l~~n~l~~-l~~~~~~L~~L~L~~n~l~~lp-~~~~l~~L~~L~l~~N~l~--~lp~~~---~~L~~L 178 (454)
T 1jl5_A 106 LPELPQSLKSLLVDNNNLKA-LSDLPPLLEYLGVSNNQLEKLP-ELQNSSFLKIIDVDNNSLK--KLPDLP---PSLEFI 178 (454)
T ss_dssp CCCCCTTCCEEECCSSCCSC-CCSCCTTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCS--CCCCCC---TTCCEE
T ss_pred cccccCCCcEEECCCCccCc-ccCCCCCCCEEECcCCCCCCCc-ccCCCCCCCEEECCCCcCc--ccCCCc---ccccEE
Confidence 33445667777777775432 2222 57888888888888777 5888888888888888887 566533 478888
Q ss_pred EccCCCCCccchhhcCCCCCCEEEccCCcCcc
Q psy2947 135 YLDNNLLDALPGFLLSMPQLDTVYRHGNHNYF 166 (441)
Q Consensus 135 ~l~~n~l~~lp~~~~~l~~L~~L~l~~N~~~~ 166 (441)
++++|+++.+| .++.+++|+.|++++|.+..
T Consensus 179 ~L~~n~l~~l~-~~~~l~~L~~L~l~~N~l~~ 209 (454)
T 1jl5_A 179 AAGNNQLEELP-ELQNLPFLTAIYADNNSLKK 209 (454)
T ss_dssp ECCSSCCSSCC-CCTTCTTCCEEECCSSCCSS
T ss_pred ECcCCcCCcCc-cccCCCCCCEEECCCCcCCc
Confidence 88888887777 47778888888888887643
No 287
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=99.38 E-value=2.8e-12 Score=106.93 Aligned_cols=101 Identities=14% Similarity=0.154 Sum_probs=88.2
Q ss_pred HHHHHHHHhhc-CCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCC-----CCHH
Q psy2947 334 KEVVDAFKAAD-TTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEG-----LSSK 407 (441)
Q Consensus 334 ~~~~~~f~~~D-~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~-----l~~~ 407 (441)
..++.+|+.+| .|++|.|+.+||..++..+ ........+..+|+.+|.+++|.|+++||..++...... ...+
T Consensus 13 ~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~-~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~ 91 (158)
T 2jnf_A 13 KLLETAFRDFETPEGSGRVSTDQIGIILEVL-GIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQ 91 (158)
T ss_dssp HHHHHHHHHSBCSSSCSSEEHHHHHHHHHHT-TCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTTSS
T ss_pred HHHHHHHHHhCCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhHHH
Confidence 45788999999 9999999999999999886 334557889999999999999999999999999875432 4566
Q ss_pred HHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 408 EVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 408 ~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.+..+|+.+|.|++|.|+.+||..++..
T Consensus 92 ~~~~~F~~~D~d~~G~I~~~el~~~l~~ 119 (158)
T 2jnf_A 92 ELREAFRLYDKEGNGYISTDVMREILAE 119 (158)
T ss_dssp THHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 7899999999999999999999998853
No 288
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.38 E-value=7.4e-13 Score=137.02 Aligned_cols=120 Identities=13% Similarity=0.228 Sum_probs=87.1
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcC-------CCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHh
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADT-------TKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAA 380 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~-------d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~ 380 (441)
.+++|+|+.+|+..++.. ..+++..+++.+|. +++|.|+++||..++..+. .+++++.+|+.|
T Consensus 159 ~d~dG~Is~~EL~~~l~~------~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~----~r~el~~aF~~f 228 (799)
T 2zkm_X 159 LNSEGKIPVKNFFQMFPA------DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC----PRPEIDEIFTSY 228 (799)
T ss_dssp CCTTSCEEHHHHHHHSCS------CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS----CCHHHHTTCC--
T ss_pred CCCCCeECHHHHHHHHhh------hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHcc----CHHHHHHHHHHh
Confidence 567888888888887753 35778888888874 8899999999999998763 247899999999
Q ss_pred CCCCCCcccHHHHHHHHHHh-CCC---------CCHHHHHHHHHHhCCC----CCCceeHHHHHHHHhccC
Q psy2947 381 DTTKSGTVPAKYLKHVLVNW-GEG---------LSSKEVDQIFREANVT----MNSKVRYEDFVKIACAPV 437 (441)
Q Consensus 381 D~~~~G~is~~ef~~~l~~~-~~~---------l~~~~~~~l~~~~d~d----~dg~i~~~ef~~~l~~~~ 437 (441)
|.+++|+|+.+||+++|... |.. ++++++++|++++|.| ++|.|+|+||+++|....
T Consensus 229 D~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF~~~L~S~~ 299 (799)
T 2zkm_X 229 HAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCGPE 299 (799)
T ss_dssp ------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHHSTT
T ss_pred ccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchhhhhhcccCcc
Confidence 99999999999999999997 665 7889999999999998 899999999999997653
No 289
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=99.38 E-value=2.3e-12 Score=97.37 Aligned_cols=71 Identities=38% Similarity=0.673 Sum_probs=65.5
Q ss_pred cCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 365 KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 365 ~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
......++++.+|+.+|.|++|.|+.+||+.+++.+|..+++++++.+++.+|.|++|.|+|+||+.++.+
T Consensus 23 ~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~ 93 (94)
T 2kz2_A 23 KDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 93 (94)
T ss_dssp CCCSCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred cCCCHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 34455788999999999999999999999999999999999999999999999999999999999998865
No 290
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.37 E-value=5.8e-13 Score=141.66 Aligned_cols=120 Identities=15% Similarity=0.251 Sum_probs=105.2
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCc
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGT 387 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~ 387 (441)
.+++|.|+.+||..++..... ..+.+.+..+|+.+|.|++|.|+++||..++..........+.+..+|+.| .|++|+
T Consensus 736 ~d~~G~I~~~El~~~l~~~g~-~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~l~~aF~~~-~d~~G~ 813 (863)
T 1sjj_A 736 RKKTGMMDCEDFRACLISMGY-NMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFKIL-AGDKNY 813 (863)
T ss_dssp SSSSSEEESTTHHHHHHHHTC-CCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCSSSHHHHHHHHGG-GTSSSE
T ss_pred CCCCCCcCHHHHHHHHHHcCC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHH-hCCCCc
Confidence 478999999999999987643 456788999999999999999999999998887654455568899999999 899999
Q ss_pred ccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC-----CCCceeHHHHHHHHhcc
Q psy2947 388 VPAKYLKHVLVNWGEGLSSKEVDQIFREANVT-----MNSKVRYEDFVKIACAP 436 (441)
Q Consensus 388 is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d-----~dg~i~~~ef~~~l~~~ 436 (441)
|+.+||+.++. +++++.+++.+|.+ +||.|+|+||+.+|.+.
T Consensus 814 Is~~El~~~l~-------~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~~~ 860 (863)
T 1sjj_A 814 ITVDELRRELP-------PDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGE 860 (863)
T ss_dssp EEHHHHHHHSC-------HHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHSCC
T ss_pred CcHHHHHHHCC-------HHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHhcC
Confidence 99999999983 78899999999976 69999999999999754
No 291
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=99.37 E-value=3e-12 Score=105.92 Aligned_cols=101 Identities=18% Similarity=0.203 Sum_probs=87.6
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCC-----CHHH
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGL-----SSKE 408 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l-----~~~~ 408 (441)
..+..+|+.+|.|++|.|+.+||..++... ........+..+|+.+|.+++|.|+++||..++....... ..+.
T Consensus 11 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~ 89 (153)
T 3ox6_A 11 EELREAFREFDKDKDGYINCRDLGNCMRTM-GYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKE 89 (153)
T ss_dssp HHHHHHHHHHHHHCSSSCCHHHHHHHHHHT-TCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHc-CCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHHH
Confidence 457888999999999999999999999877 3455578899999999999999999999999997643222 2577
Q ss_pred HHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 409 VDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 409 ~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+..+|+.+|.|++|.|+.+||..++..
T Consensus 90 ~~~~F~~~D~d~~G~i~~~el~~~l~~ 116 (153)
T 3ox6_A 90 LRDAFREFDTNGDGEISTSELREAMRA 116 (153)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 899999999999999999999998864
No 292
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.36 E-value=1.1e-12 Score=111.86 Aligned_cols=103 Identities=18% Similarity=0.166 Sum_probs=93.0
Q ss_pred CCcccEEeccCCCcC--cccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCch--hhhcCCCCCEE
Q psy2947 60 FSHAFLLSLSYTPIG--RRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPF--TLTFCKNLTHL 134 (441)
Q Consensus 60 l~~L~~l~l~~n~i~--~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~--~~~~l~~L~~L 134 (441)
.++|+.|++++|.|. ..+..+++|++|+|++|+|+.+|+. +..+++|+.|++++|.++ .+|. .+..+++|++|
T Consensus 41 ~~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~--~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 41 LDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV--ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TTCCSEEECCSSCCCEECCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC--CGGGGGGGGGCTTCCEE
T ss_pred CCCCCEEECCCCCCCcccccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC--cchhhHhhhcCCCCCEE
Confidence 348999999999665 4677899999999999999999877 489999999999999997 7887 78999999999
Q ss_pred EccCCCCCccchh----hcCCCCCCEEEccCCcC
Q psy2947 135 YLDNNLLDALPGF----LLSMPQLDTVYRHGNHN 164 (441)
Q Consensus 135 ~l~~n~l~~lp~~----~~~l~~L~~L~l~~N~~ 164 (441)
++++|+++.+|.. +..+++|+.|++++|..
T Consensus 119 ~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 119 CILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp ECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred EecCCCCCCcHhHHHHHHHHCCccceeCCCcCCH
Confidence 9999999999874 88999999999999984
No 293
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.36 E-value=2.7e-12 Score=129.46 Aligned_cols=137 Identities=19% Similarity=0.206 Sum_probs=108.6
Q ss_pred ccCCCCCCCEEE-ccCCCCCcCCc------CccC--CCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEccCCCCCccch
Q psy2947 76 RIFKCDTVEVLS-LKSNSLTSLPP------DIGR--LTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLDALPG 146 (441)
Q Consensus 76 ~~~~l~~L~~L~-l~~n~l~~lp~------~~~~--l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~lp~ 146 (441)
.+..+++|+.|+ ++.|.+..++. .+.. ...|+.|++++|.++ .+|. ++.+++|+.|+|++|+|+.+|.
T Consensus 404 ~l~~l~~L~~L~~l~~n~~~~L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~--~lp~-~~~l~~L~~L~Ls~N~l~~lp~ 480 (567)
T 1dce_A 404 TLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLT--VLCH-LEQLLLVTHLDLSHNRLRALPP 480 (567)
T ss_dssp HHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHTTCSEEECTTSCCS--SCCC-GGGGTTCCEEECCSSCCCCCCG
T ss_pred HHHHHHhcccCcchhhcccchhhhhhhhcccccccCccCceEEEecCCCCC--CCcC-ccccccCcEeecCcccccccch
Confidence 345567788887 55554332221 0111 135899999999998 6887 9999999999999999999999
Q ss_pred hhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccC--CchhhhhhhhcccccccccCCCCC
Q psy2947 147 FLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQ--PSRLQDLAVQSVIASKENFFEPGL 223 (441)
Q Consensus 147 ~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~--p~~l~~l~~l~~l~l~~n~~~~~~ 223 (441)
.++.+++|+.|+|++|.+. .+| .+..++.+..+ +++|.+..+ |..+..+++|+.|++++|++..
T Consensus 481 ~~~~l~~L~~L~Ls~N~l~----------~lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~-- 547 (567)
T 1dce_A 481 ALAALRCLEVLQASDNALE----------NVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ-- 547 (567)
T ss_dssp GGGGCTTCCEEECCSSCCC----------CCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGG--
T ss_pred hhhcCCCCCEEECCCCCCC----------CCc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCC--
Confidence 9999999999999999963 245 67788888888 899999888 8999999999999999998764
Q ss_pred CCchh
Q psy2947 224 FPGPL 228 (441)
Q Consensus 224 ~p~~~ 228 (441)
+|...
T Consensus 548 ~~~~~ 552 (567)
T 1dce_A 548 EEGIQ 552 (567)
T ss_dssp SSSCT
T ss_pred CccHH
Confidence 44433
No 294
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.35 E-value=1.8e-12 Score=107.12 Aligned_cols=102 Identities=23% Similarity=0.206 Sum_probs=89.4
Q ss_pred CCCCcccEEeccCCCcC--cccCCCCCCCEEEccCCCCCc-CCcCccCCCCCcEEEccCCcCCCCCCc--hhhhcCCCCC
Q psy2947 58 QYFSHAFLLSLSYTPIG--RRIFKCDTVEVLSLKSNSLTS-LPPDIGRLTNLRVLCLTDNCLQNASIP--FTLTFCKNLT 132 (441)
Q Consensus 58 ~~l~~L~~l~l~~n~i~--~~~~~l~~L~~L~l~~n~l~~-lp~~~~~l~~L~~L~l~~n~l~~~~~p--~~~~~l~~L~ 132 (441)
..+++|+.|++++|.+. ..+..+++|++|++++|.++. +|..+..+++|++|++++|.++ .+| ..+..+++|+
T Consensus 39 ~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~--~~~~~~~~~~l~~L~ 116 (149)
T 2je0_A 39 DEFEELEFLSTINVGLTSIANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIK--DLSTIEPLKKLENLK 116 (149)
T ss_dssp TTCTTCCEEECTTSCCCCCTTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCC--SHHHHGGGGGCTTCC
T ss_pred hhcCCCcEEECcCCCCCCchhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCC--ChHHHHHHhhCCCCC
Confidence 34789999999999654 567789999999999999997 7776888999999999999998 554 7789999999
Q ss_pred EEEccCCCCCccch----hhcCCCCCCEEEccC
Q psy2947 133 HLYLDNNLLDALPG----FLLSMPQLDTVYRHG 161 (441)
Q Consensus 133 ~L~l~~n~l~~lp~----~~~~l~~L~~L~l~~ 161 (441)
+|++++|+++.+|. .+..+++|+.|++++
T Consensus 117 ~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 117 SLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred EEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999999988875 688899999998864
No 295
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=99.35 E-value=7.1e-12 Score=104.69 Aligned_cols=117 Identities=15% Similarity=0.146 Sum_probs=93.1
Q ss_pred HHHHHhhhccccCCCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHhhcCC--CCCHHHHHHHHHhh
Q psy2947 266 LEFRECFFLFARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTHSKA--EDIPKEVVDAFKAA 343 (441)
Q Consensus 266 ~~l~~~f~~~d~~G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~~~~~--~~~~~~~~~~f~~~ 343 (441)
.+++.++.. -|..++..++..++.. . .+++|.|+|+||+.++...... ....+.++.+|+.|
T Consensus 31 ~El~~~lr~---lG~~~t~~el~~~~~~-d------------~~~~g~i~f~eFl~~~~~~~~~~~~~~~~~l~~aF~~f 94 (159)
T 3i5g_C 31 AKVGDLLRC---LGMNPTEAQVHQHGGT-K------------KMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTF 94 (159)
T ss_dssp GGHHHHHHH---TTCCCCHHHHHTTTCC-S------------STTSCEECHHHHHHHHHHHTTCCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHH---cCCCCCHHHHHHHHcc-c------------ccCCCcccHHHHHHHHHHhhcccccchHHHHHHHHHHH
Confidence 344555533 3554477777665432 2 5789999999999999876543 45578899999999
Q ss_pred cCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCC--CCCCcccHHHHHHHHHH
Q psy2947 344 DTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADT--TKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 344 D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~--~~~G~is~~ef~~~l~~ 399 (441)
|.|++|+|+.+||++++..+ +...+.+++..+++.+|. |++|.|+++||.++|..
T Consensus 95 D~d~~G~I~~~el~~~l~~~-g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~ 151 (159)
T 3i5g_C 95 DREGQGLISSAEIRNVLKML-GERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMA 151 (159)
T ss_dssp CTTSSSEECHHHHHHHHHHS-SSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHH
T ss_pred hcCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHC
Confidence 99999999999999999887 456678899999999995 88999999999999865
No 296
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=99.34 E-value=3.9e-12 Score=109.74 Aligned_cols=102 Identities=14% Similarity=0.188 Sum_probs=83.7
Q ss_pred HHHHHHHHhh-cCCCCCcccHHHHHHHHHhhc---cCCCChHHHHHHH-----------HHhCCCCCCcccHHHHHHHHH
Q psy2947 334 KEVVDAFKAA-DTTKSGKLSFPDFLKVMHTHS---KAEDIPKEVVDAF-----------KAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 334 ~~~~~~f~~~-D~d~~g~i~~~ef~~~~~~~~---~~~~~~~~~~~~f-----------~~~D~~~~G~is~~ef~~~l~ 398 (441)
.+++.+|+.+ |.|++|.|+.+||..++.... +.......+..+| +.+|.|++|.|+++||..++.
T Consensus 12 ~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~ 91 (191)
T 2ccm_A 12 NKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWA 91 (191)
T ss_dssp HHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHHHH
Confidence 5688999999 999999999999999888762 2233345666666 999999999999999999987
Q ss_pred HhC------C---CCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 399 NWG------E---GLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 399 ~~~------~---~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
... . ....+.+..+|+.+|.|++|.|+++||..++..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~ 137 (191)
T 2ccm_A 92 ECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMS 137 (191)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHT
T ss_pred HHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 752 1 122467889999999999999999999998843
No 297
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=99.34 E-value=1.5e-12 Score=112.15 Aligned_cols=102 Identities=19% Similarity=0.220 Sum_probs=88.3
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHH
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQI 412 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l 412 (441)
...++.+|+.+|.|++|.|+.+||..++..+ ......+.+..+|+.+|.+++|.|+++||..++.........+.+..+
T Consensus 9 ~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~-g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~ 87 (188)
T 1s6i_A 9 IGGLKELFKMIDTDNSGTITFDELKDGLKRV-GSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSA 87 (188)
T ss_dssp TCSHHHHHHTTSSSSSSCEEHHHHHHHHTTT-TCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHc-CCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHHHHHHH
Confidence 3468899999999999999999999999877 344557889999999999999999999999998765443445678899
Q ss_pred HHHhCCCCCCceeHHHHHHHHhc
Q psy2947 413 FREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 413 ~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
|+.+|.|++|.|+.+||..++..
T Consensus 88 F~~~D~d~dG~Is~~El~~~l~~ 110 (188)
T 1s6i_A 88 FSYFDKDGSGYITLDEIQQACKD 110 (188)
T ss_dssp HHHTTTTCSSEEEHHHHHHTTTT
T ss_pred HHHHCCCCCCcCcHHHHHHHHHH
Confidence 99999999999999999988753
No 298
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=99.34 E-value=4.3e-12 Score=108.23 Aligned_cols=102 Identities=17% Similarity=0.218 Sum_probs=87.4
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhC-CCCCHHHHHH
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWG-EGLSSKEVDQ 411 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~-~~l~~~~~~~ 411 (441)
...++.+|+.+|.|++|.|+.+||..++..+. .......+..+|+.+|.+++|.|+++||..++.... .....+.+..
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~-~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~ 88 (179)
T 2f2o_A 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIRE 88 (179)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTT-CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC-CCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccHHHHHH
Confidence 46788999999999999999999999998763 445577899999999999999999999999987642 1224567889
Q ss_pred HHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 412 IFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 412 l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+|+.+|.|++|.|+.+||..++..
T Consensus 89 ~F~~~D~d~~G~I~~~E~~~~l~~ 112 (179)
T 2f2o_A 89 AFRVFDKDGNGYISAAELRHVMTN 112 (179)
T ss_dssp HHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHhCCCCCCcCcHHHHHHHHHH
Confidence 999999999999999999998854
No 299
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=99.33 E-value=4.7e-12 Score=108.44 Aligned_cols=102 Identities=16% Similarity=0.153 Sum_probs=83.4
Q ss_pred HHHHHHHHhh-cCCCCCcccHHHHHHHHHhhcc---CCCChHHHH-----------HHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 334 KEVVDAFKAA-DTTKSGKLSFPDFLKVMHTHSK---AEDIPKEVV-----------DAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 334 ~~~~~~f~~~-D~d~~g~i~~~ef~~~~~~~~~---~~~~~~~~~-----------~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
.+++.+|+.+ |.|++|.|+++||..++..... .......+. .+|+.+|.|++|.|+++||..++.
T Consensus 8 ~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 87 (185)
T 2sas_A 8 QKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWE 87 (185)
T ss_dssp HHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHH
Confidence 5688999999 9999999999999998877641 223344444 349999999999999999999998
Q ss_pred HhCC---------CCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 399 NWGE---------GLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 399 ~~~~---------~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.... ....+.+..+|+.+|.|++|.|+++||.+++..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~ 133 (185)
T 2sas_A 88 KTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKN 133 (185)
T ss_dssp HHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTS
T ss_pred HHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHH
Confidence 7521 234578899999999999999999999998853
No 300
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.32 E-value=8.5e-12 Score=122.70 Aligned_cols=94 Identities=24% Similarity=0.343 Sum_probs=57.0
Q ss_pred CcccEEeccCC---CcCcccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEcc
Q psy2947 61 SHAFLLSLSYT---PIGRRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLD 137 (441)
Q Consensus 61 ~~L~~l~l~~n---~i~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~ 137 (441)
++|+.|++++| .+| .+..+++|++|++++|+++.+|..+ .+|++|++++|.++ .+| .++.+++|++|+++
T Consensus 131 ~~L~~L~L~~n~l~~lp-~~~~l~~L~~L~l~~N~l~~lp~~~---~~L~~L~L~~n~l~--~l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEKLP-ELQNSSFLKIIDVDNNSLKKLPDLP---PSLEFIAAGNNQLE--ELP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSCCCCCC---TTCCEEECCSSCCS--SCC-CCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCCCc-ccCCCCCCCEEECCCCcCcccCCCc---ccccEEECcCCcCC--cCc-cccCCCCCCEEECC
Confidence 56777777776 344 4666677777777777776666433 36666666666665 455 46666666666666
Q ss_pred CCCCCccchhhcCCCCCCEEEccCCcC
Q psy2947 138 NNLLDALPGFLLSMPQLDTVYRHGNHN 164 (441)
Q Consensus 138 ~n~l~~lp~~~~~l~~L~~L~l~~N~~ 164 (441)
+|+++.+|... ++|+.|++++|.+
T Consensus 204 ~N~l~~l~~~~---~~L~~L~l~~n~l 227 (454)
T 1jl5_A 204 NNSLKKLPDLP---LSLESIVAGNNIL 227 (454)
T ss_dssp SSCCSSCCCCC---TTCCEEECCSSCC
T ss_pred CCcCCcCCCCc---CcccEEECcCCcC
Confidence 66665555321 3555555555554
No 301
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=99.31 E-value=4.3e-12 Score=89.17 Aligned_cols=65 Identities=15% Similarity=0.306 Sum_probs=60.5
Q ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhcc
Q psy2947 372 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 372 ~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~ 436 (441)
+++.+|+.+|.+++|.|+.+||+.+++.+|..+++++++.+++.+|.|++|.|+|+||+.++.+.
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~ 66 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEKM 66 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999998753
No 302
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=99.31 E-value=1.8e-11 Score=100.68 Aligned_cols=100 Identities=10% Similarity=0.083 Sum_probs=87.5
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHh---CCCCCCcccHHHHHHHHHHh---CCCCCHH
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAA---DTTKSGTVPAKYLKHVLVNW---GEGLSSK 407 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~---D~~~~G~is~~ef~~~l~~~---~~~l~~~ 407 (441)
.+++.+|+.+|.|++|.|+.+||..++... ......+.+..+|+.+ |.++ |.|+++||..++... ......+
T Consensus 8 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~-~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~ 85 (149)
T 2mys_C 8 DDFKEAFLLFDRTGDAKITASQVGDIARAL-GQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFE 85 (149)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHH
Confidence 568899999999999999999999999877 3344578899999999 9999 999999999999875 3345678
Q ss_pred HHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 408 EVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 408 ~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.+..+|+.+|.|++|.|+.+||..++..
T Consensus 86 ~~~~~F~~~D~d~~G~i~~~el~~~l~~ 113 (149)
T 2mys_C 86 DFVEGLRVFDKEGNGTVMGAELRHVLAT 113 (149)
T ss_pred HHHHHHHHhCCCCCceEcHHHHHHHHHH
Confidence 8999999999999999999999998854
No 303
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=99.31 E-value=9.6e-12 Score=108.92 Aligned_cols=127 Identities=13% Similarity=0.090 Sum_probs=92.6
Q ss_pred hHHHHHhhhccccCCCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHH---------hhcCCCCCHHH
Q psy2947 265 YLEFRECFFLFARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH---------THSKAEDIPKE 335 (441)
Q Consensus 265 ~~~l~~~f~~~d~~G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~---------~~~~~~~~~~~ 335 (441)
..++..++..+...+.. +.+++..++..+ ..-+..++.+++|.|+++||..++. .........++
T Consensus 55 ~~El~~~l~~~~~~~~~-~~~~~~~l~~~~-----~~lf~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (208)
T 2hpk_A 55 MDEVLYWPDRMRQLVNA-TDEQVEKMRDAV-----RVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIAL 128 (208)
T ss_dssp HHHHTHHHHHHHHHSCC-CHHHHHHHHHHH-----HHHHHHTTCBTTTBEEGGGHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred HHHHHHHHHHHHhhcCC-CHHHHHHHHHHH-----HHHHHHhCCCCCCeEcHHHHHHHHHHHhhhhhhhhccCChHHHHH
Confidence 34444444333322234 677788777332 0111333368999999999999986 33233333444
Q ss_pred -HHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 336 -VVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 336 -~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
++.+|+.+|.|++|.|+.+||..++.... ...+++..+|+.+|.|++|.|+++||..++...
T Consensus 129 ~~~~~F~~~D~d~~G~Is~~El~~~l~~~g---~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 191 (208)
T 2hpk_A 129 LSNSYYDVLDDDGDGTVDVDELKTMMKAFD---VPQEAAYTFFEKADTDKSGKLERTELVHLFRKF 191 (208)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHTT---SCTTHHHHHHHHHCTTCCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHhC---cCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 79999999999999999999999998763 556789999999999999999999999999764
No 304
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.31 E-value=7.7e-15 Score=127.81 Aligned_cols=101 Identities=22% Similarity=0.248 Sum_probs=58.9
Q ss_pred CCcccEEeccCC---CcCcccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEc
Q psy2947 60 FSHAFLLSLSYT---PIGRRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYL 136 (441)
Q Consensus 60 l~~L~~l~l~~n---~i~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l 136 (441)
+++|+.|++++| .+| .+..+++|++|++++|.++.+|..+..+++|+.|++++|+++ .+| .+..+++|++|++
T Consensus 47 l~~L~~L~ls~n~l~~l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~--~l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 47 LKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIA--SLS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTTCSEEECSEEEESCCC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECC--CHH-HHHHHHHSSEEEE
T ss_pred CCCCCEEECCCCCCcccc-ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcCCcCC--cCC-ccccCCCCCEEEC
Confidence 455666666665 333 444556666666666666666555555566666666666665 344 4555666666666
Q ss_pred cCCCCCccch--hhcCCCCCCEEEccCCcC
Q psy2947 137 DNNLLDALPG--FLLSMPQLDTVYRHGNHN 164 (441)
Q Consensus 137 ~~n~l~~lp~--~~~~l~~L~~L~l~~N~~ 164 (441)
++|+++.+|. .+..+++|+.|++++|++
T Consensus 123 ~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l 152 (198)
T 1ds9_A 123 SNNKITNWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp SEEECCCHHHHHHHTTTTTCSEEEECSCHH
T ss_pred CCCcCCchhHHHHHhcCCCCCEEEecCCcc
Confidence 6666655542 455566666666666653
No 305
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=99.30 E-value=5.7e-13 Score=103.67 Aligned_cols=100 Identities=13% Similarity=0.180 Sum_probs=80.8
Q ss_pred CCcCHHHHHHHHH--hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhc--cCCCChH
Q psy2947 296 MSPTIAELKKYLA--EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHS--KAEDIPK 371 (441)
Q Consensus 296 ~~~~~~~~~~~~~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~--~~~~~~~ 371 (441)
..++..++.+++. +++|.|+++||..++... ....+.++.+|+.+|.|++|.|+.+||..++.... ......+
T Consensus 4 ~~~~~~e~~~l~~~~d~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~ 80 (108)
T 2kyc_A 4 DILSPSDIAAALRDCQAPDSFSPKKFFQISGMS---KKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTAS 80 (108)
T ss_dssp SSSCHHHHHHHHTTSCSTTTCCHHHHHHHHTCT---TCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCCTT
T ss_pred ccCCHHHHHHHHHHcCCCCcCCHHHHHHHHhhC---cccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCCHH
Confidence 3445555555554 378999999999998522 34457799999999999999999999999998763 2344567
Q ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 372 EVVDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 372 ~~~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
+++.+|+.+|.+++|.|+++||..+++
T Consensus 81 ~~~~~~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 81 ETKTFLAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp TTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence 889999999999999999999999875
No 306
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=99.30 E-value=1.7e-11 Score=102.25 Aligned_cols=108 Identities=14% Similarity=0.147 Sum_probs=88.9
Q ss_pred CCccCHHHHHHHHHHcCCCcCHHHHHHHHHhCCCcccHHHHHHHHHh--hcCCCCCHHHHHHHHHhhcCCCCCcccHHHH
Q psy2947 279 GTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHT--HSKAEDIPKEVVDAFKAADTTKSGKLSFPDF 356 (441)
Q Consensus 279 G~i~~~~el~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~~~~~--~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef 356 (441)
|...+..++..++..++ .++|.|+++||+.++.. ........+.++.+|+.+|.|++|.|+.+||
T Consensus 41 g~~~~~~~~~~l~~~~d-------------~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El 107 (159)
T 2ovk_C 41 GMNPTEAQVHQHGGTKK-------------MGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEI 107 (159)
T ss_dssp TCCCCHHHHHHTTCCSS-------------TTSCEEEHHHHHHHHHHHTTCSTTCCHHHHHHHHHHTCTTSSSEECHHHH
T ss_pred CCCCCHHHHHHHHHHhc-------------CCCCeEcHHHHHHHHHHHhhccCCCcHHHHHHHHHHHCCCCCCcCcHHHH
Confidence 43336777777776653 24699999999999954 3334556789999999999999999999999
Q ss_pred HHHHHhhccCCCChHHHHHHHH--HhCCCCCCcccHHHHHHHHHHh
Q psy2947 357 LKVMHTHSKAEDIPKEVVDAFK--AADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~f~--~~D~~~~G~is~~ef~~~l~~~ 400 (441)
+.++... +.....+++..+|+ .+|.|++|.|+++||.+++...
T Consensus 108 ~~~l~~~-g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 152 (159)
T 2ovk_C 108 RNVLKML-GERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAG 152 (159)
T ss_dssp HHHHHHS-SSCCCHHHHHHHHHHTTCCCCTTCCEEHHHHHHHHHHC
T ss_pred HHHHHHh-CCCCCHHHHHHHHHHhcCCCCCCCcEeHHHHHHHHhcC
Confidence 9999987 45566789999999 8899999999999999999864
No 307
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=99.30 E-value=7.1e-12 Score=104.28 Aligned_cols=100 Identities=9% Similarity=0.082 Sum_probs=88.2
Q ss_pred HHHHHHHHhhcC--CCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCC--CCCHHHH
Q psy2947 334 KEVVDAFKAADT--TKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGE--GLSSKEV 409 (441)
Q Consensus 334 ~~~~~~f~~~D~--d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~--~l~~~~~ 409 (441)
..++.+|+.+|. |++|.|+.+||..++..+. .......+..+ +.+|.+++|.|+++||..++..... ....+.+
T Consensus 9 ~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l 86 (156)
T 1wdc_C 9 DDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLG-INPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADY 86 (156)
T ss_dssp HHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTT-CCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHH
T ss_pred HHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcC-CCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHH
Confidence 457889999999 9999999999999998873 34556788888 9999999999999999999988643 5677899
Q ss_pred HHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 410 DQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 410 ~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
..+|+.+|.|++|.|+.+||..++..
T Consensus 87 ~~~F~~~D~d~~G~I~~~el~~~l~~ 112 (156)
T 1wdc_C 87 MEAFKTFDREGQGFISGAELRHVLTA 112 (156)
T ss_dssp HHHHHTTCSSSSSEEEHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 99999999999999999999998853
No 308
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=99.30 E-value=3.8e-12 Score=96.70 Aligned_cols=65 Identities=11% Similarity=0.172 Sum_probs=56.5
Q ss_pred HHHHHHHHHhC-CCCC-CcccHHHHHHHHHH-----hCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 371 KEVVDAFKAAD-TTKS-GTVPAKYLKHVLVN-----WGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 371 ~~~~~~f~~~D-~~~~-G~is~~ef~~~l~~-----~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+.+..+|+.|| +||+ |+|+.+||+.+++. +|..+++++++.+++.+|.|+||.|+|+||+.+|.+
T Consensus 10 ~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~ 81 (101)
T 3nso_A 10 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 81 (101)
T ss_dssp HHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 56778999997 8887 99999999999986 457788999999999999999999999999988754
No 309
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.29 E-value=2.6e-12 Score=129.82 Aligned_cols=129 Identities=12% Similarity=0.188 Sum_probs=67.4
Q ss_pred hHHHHHhhhccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHH----hCCCcccHHHHHHHHHhhcCCCCCHHHHHH
Q psy2947 265 YLEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIPKEVVD 338 (441)
Q Consensus 265 ~~~l~~~f~~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~----~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 338 (441)
...++++|..+|.+ |.| +.+|++.+++.++..++..++..++. +++|.|+++||..++..... .+++++
T Consensus 10 e~~l~~~F~~fD~d~dG~I-s~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~----~~el~~ 84 (624)
T 1djx_A 10 QHWIHSCLRKADKNKDNKM-NFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ----RAEIDR 84 (624)
T ss_dssp -----------------------------------------------------------CTTHHHHHHTC----CHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcC-cHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhcc----HHHHHH
Confidence 34688999999986 789 89999999999988888777777664 68899999999999987633 478999
Q ss_pred HHHhhcCCCCCcccHHHHHHHHHhhccCC-CChHHHHHHHHHhCCC----CCCcccHHHHHHHHHH
Q psy2947 339 AFKAADTTKSGKLSFPDFLKVMHTHSKAE-DIPKEVVDAFKAADTT----KSGTVPAKYLKHVLVN 399 (441)
Q Consensus 339 ~f~~~D~d~~g~i~~~ef~~~~~~~~~~~-~~~~~~~~~f~~~D~~----~~G~is~~ef~~~l~~ 399 (441)
+|+.||.+ +|.|+.+||++++...++.. ..+++++++|+.+|.+ ++|.|+++||.++|..
T Consensus 85 aF~~fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s 149 (624)
T 1djx_A 85 AFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS 149 (624)
T ss_dssp HHHHHHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHS
T ss_pred HHHHhcCC-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcC
Confidence 99999985 89999999999999765554 6688999999999998 7999999999999975
No 310
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.28 E-value=3.1e-13 Score=127.68 Aligned_cols=84 Identities=26% Similarity=0.222 Sum_probs=38.5
Q ss_pred CCCCCCCEEEccCCCCC-c-CCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEccCC-CCC--ccchhhcCCC
Q psy2947 78 FKCDTVEVLSLKSNSLT-S-LPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNN-LLD--ALPGFLLSMP 152 (441)
Q Consensus 78 ~~l~~L~~L~l~~n~l~-~-lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n-~l~--~lp~~~~~l~ 152 (441)
..+++|++|++++|.++ . +|..+..+++|++|++++|.++ +..|..++.+++|++|++++| .++ .+|..+..++
T Consensus 90 ~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~-~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~ 168 (336)
T 2ast_B 90 FSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLS-DPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS 168 (336)
T ss_dssp CCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCC-HHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCT
T ss_pred ccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccC-HHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCC
Confidence 34444555555544444 1 3434444445555555554444 333444444445555555544 343 2344444444
Q ss_pred CCCEEEccCC
Q psy2947 153 QLDTVYRHGN 162 (441)
Q Consensus 153 ~L~~L~l~~N 162 (441)
+|+.|++++|
T Consensus 169 ~L~~L~l~~~ 178 (336)
T 2ast_B 169 RLDELNLSWC 178 (336)
T ss_dssp TCCEEECCCC
T ss_pred CCCEEcCCCC
Confidence 4555555444
No 311
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.28 E-value=3.1e-13 Score=130.39 Aligned_cols=20 Identities=5% Similarity=0.018 Sum_probs=10.4
Q ss_pred CCchhhhhhhhccccccccc
Q psy2947 199 QPSRLQDLAVQSVIASKENF 218 (441)
Q Consensus 199 ~p~~l~~l~~l~~l~l~~n~ 218 (441)
+|..+..+++|+.|++++|.
T Consensus 236 l~~~l~~~~~L~~L~L~~n~ 255 (386)
T 2ca6_A 236 LAIALKSWPNLRELGLNDCL 255 (386)
T ss_dssp HHHHGGGCTTCCEEECTTCC
T ss_pred HHHHHccCCCcCEEECCCCC
Confidence 44445555555555555554
No 312
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=99.28 E-value=8.5e-12 Score=102.11 Aligned_cols=69 Identities=19% Similarity=0.228 Sum_probs=61.3
Q ss_pred CCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 330 EDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 330 ~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
....+.+..+|+.+|.|++|.|+.+||..++... ......+++..+|+.+|.|++|.|+++||.+++..
T Consensus 72 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 140 (143)
T 3j04_B 72 TDPEDVIRNAFACFDEEASGFIHEDHLRELLTTM-GDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKH 140 (143)
T ss_dssp SCCHHHHHHHHTTSCSSSCCCCCTTTHHHHHHTS-SSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHS
T ss_pred CCcHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHc-CCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence 3456788999999999999999999999999876 44566789999999999999999999999999874
No 313
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=99.28 E-value=3.2e-11 Score=106.98 Aligned_cols=96 Identities=18% Similarity=0.202 Sum_probs=81.9
Q ss_pred HHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH-------hC------C
Q psy2947 336 VVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN-------WG------E 402 (441)
Q Consensus 336 ~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~-------~~------~ 402 (441)
+..+|+.||.|++|.|++.||+.++..+.++ ..+++++-+|+.+| |++|.|+.+|+..+++. +| .
T Consensus 134 a~~lf~~FD~~~~G~I~f~ef~~aLs~l~rG-~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~ 211 (261)
T 1eg3_A 134 LNWLLNVYDTGRTGRIRVLSFKTGIISLCKA-HLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGG 211 (261)
T ss_dssp HHHHHHHHCTTCCSEEEHHHHHHHHHHTSSS-CHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTC
T ss_pred HHHHHHHccCCCCceEeHHHHHHHHHHHcCC-CHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence 5668999999999999999999999987544 44789999999999 99999999999999865 23 2
Q ss_pred CCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 403 GLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 403 ~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.-.++.++.+|+.+| +||.|+.+||++.+.+
T Consensus 212 ~~~e~~v~~~F~~~d--~dg~It~~EFl~~~~~ 242 (261)
T 1eg3_A 212 SNIEPSVRSCFQFAN--NKPEIEAALFLDWMRL 242 (261)
T ss_dssp SCCHHHHHHHHHHTT--TCSCBCHHHHHHHHHT
T ss_pred CCHHHHHHHHHHhCC--CCCcCCHHHHHHHHHh
Confidence 235777899999995 7899999999998754
No 314
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=99.27 E-value=1.2e-11 Score=103.81 Aligned_cols=102 Identities=12% Similarity=0.069 Sum_probs=80.2
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHhh---ccCCCChHHHH-----------HHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFLKVMHTH---SKAEDIPKEVV-----------DAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~---~~~~~~~~~~~-----------~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
.+++.+|+.+|.|++|.|+.+||..++... .+......++. .+|+.+|.+++|.|+++||..++..
T Consensus 4 ~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~ 83 (166)
T 3akb_A 4 RRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGAVK 83 (166)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTHHH
T ss_pred HHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 568899999999999999999999976432 12233333443 5589999999999999999999887
Q ss_pred hCCCCC-------HHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 400 WGEGLS-------SKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 400 ~~~~l~-------~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.....+ .+.+..+|+.+|.|++|.|+.+||..++..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~ 126 (166)
T 3akb_A 84 RLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTA 126 (166)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHH
T ss_pred HhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 532111 234889999999999999999999988753
No 315
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.27 E-value=5.3e-13 Score=128.73 Aligned_cols=157 Identities=18% Similarity=0.120 Sum_probs=96.9
Q ss_pred CCCcccEEeccCCCcCc--------ccCCCCCCCEEEccCCCCCc-----CCcCccCC---------CCCcEEEccCCcC
Q psy2947 59 YFSHAFLLSLSYTPIGR--------RIFKCDTVEVLSLKSNSLTS-----LPPDIGRL---------TNLRVLCLTDNCL 116 (441)
Q Consensus 59 ~l~~L~~l~l~~n~i~~--------~~~~l~~L~~L~l~~n~l~~-----lp~~~~~l---------~~L~~L~l~~n~l 116 (441)
.+++|+.|+|++|.+.. .+..+++|++|+|++|.++. ++..+..+ ++|++|++++|++
T Consensus 92 ~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l 171 (386)
T 2ca6_A 92 KCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRL 171 (386)
T ss_dssp TCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCC
T ss_pred hCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCC
Confidence 35666777777764432 44556677777777777652 22223333 6777777777776
Q ss_pred CCCCCc---hhhhcCCCCCEEEccCCCCC------ccchhhcCCCCCCEEEccCCcCccCcccccccccccccccccchh
Q psy2947 117 QNASIP---FTLTFCKNLTHLYLDNNLLD------ALPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTR 187 (441)
Q Consensus 117 ~~~~~p---~~~~~l~~L~~L~l~~n~l~------~lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~ 187 (441)
+.+.+| ..+..+++|++|++++|+|+ -+|..+..+++|+.|+|++|.+.... ...+|..+..++.+
T Consensus 172 ~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g-----~~~l~~~l~~~~~L 246 (386)
T 2ca6_A 172 ENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLG-----SSALAIALKSWPNL 246 (386)
T ss_dssp TGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHH-----HHHHHHHGGGCTTC
T ss_pred CcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHH-----HHHHHHHHccCCCc
Confidence 422344 34556677777777777775 22335666777777777777742110 13356666677777
Q ss_pred HHH-HhhcccccC-----Cchhhh--hhhhcccccccccCC
Q psy2947 188 DEV-LRKQKKLHQ-----PSRLQD--LAVQSVIASKENFFE 220 (441)
Q Consensus 188 ~~~-l~~~~~~~~-----p~~l~~--l~~l~~l~l~~n~~~ 220 (441)
..+ +++|.++.. |..+.. +++|+.|++++|.+.
T Consensus 247 ~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~ 287 (386)
T 2ca6_A 247 RELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIE 287 (386)
T ss_dssp CEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCB
T ss_pred CEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCC
Confidence 666 777776543 556644 888999999998754
No 316
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=99.27 E-value=1.5e-11 Score=101.97 Aligned_cols=66 Identities=11% Similarity=0.088 Sum_probs=59.4
Q ss_pred CHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 332 IPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 332 ~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
..+.++.+|+.||.|++|+|+.+||+.++..+ +...+.+++..+|+.+|.+ +|.|+++||.++|..
T Consensus 83 ~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~-g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~ 148 (153)
T 3i5g_B 83 PEDALRNAFSMFDEDGQGFIPEDYLKDLLENM-GDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGK 148 (153)
T ss_dssp CHHHHHHHHHTTCSSCSSCCCHHHHHHHHHSS-SSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHC
T ss_pred cHHHHHHHHhccccCCCCeEeHHHHHHHHHHc-CCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcC
Confidence 45678999999999999999999999999876 4566788999999999988 999999999999965
No 317
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.26 E-value=4.8e-13 Score=126.38 Aligned_cols=153 Identities=14% Similarity=0.165 Sum_probs=110.9
Q ss_pred CCCcccEEeccCCC-----cCcccCCCCCCCEEEccCCCCC-cCCcCccCCCCCcEEEccCC-cCCCC-CCchhhhcCCC
Q psy2947 59 YFSHAFLLSLSYTP-----IGRRIFKCDTVEVLSLKSNSLT-SLPPDIGRLTNLRVLCLTDN-CLQNA-SIPFTLTFCKN 130 (441)
Q Consensus 59 ~l~~L~~l~l~~n~-----i~~~~~~l~~L~~L~l~~n~l~-~lp~~~~~l~~L~~L~l~~n-~l~~~-~~p~~~~~l~~ 130 (441)
.+++|+.|++++|. +|..+..+++|++|+|++|.++ ..|..++.+++|++|++++| .++ + .+|..+..+++
T Consensus 91 ~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~-~~~l~~~~~~~~~ 169 (336)
T 2ast_B 91 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFS-EFALQTLLSSCSR 169 (336)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCC-HHHHHHHHHHCTT
T ss_pred cCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCC-HHHHHHHHhcCCC
Confidence 36888999999884 4455778889999999999888 66777888999999999998 565 2 26666788899
Q ss_pred CCEEEccCC-CCCc--cchhhcCCC-CCCEEEccCCcCccCcccccccccccccccccchhHHH-Hhhcc-c-ccCCchh
Q psy2947 131 LTHLYLDNN-LLDA--LPGFLLSMP-QLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQK-K-LHQPSRL 203 (441)
Q Consensus 131 L~~L~l~~n-~l~~--lp~~~~~l~-~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~-~-~~~p~~l 203 (441)
|++|++++| .++. ++..+..++ +|+.|++++|.+.... ..+|..+..++.+..+ +.+|. + ...+..+
T Consensus 170 L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~------~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l 243 (336)
T 2ast_B 170 LDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQK------SDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEF 243 (336)
T ss_dssp CCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCH------HHHHHHHHHCTTCSEEECTTCTTCCGGGGGGG
T ss_pred CCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCH------HHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHH
Confidence 999999999 8864 677778888 8999999988521110 2334445555555555 56665 3 2445567
Q ss_pred hhhhhhccccccccc
Q psy2947 204 QDLAVQSVIASKENF 218 (441)
Q Consensus 204 ~~l~~l~~l~l~~n~ 218 (441)
..+++|+.|++++|.
T Consensus 244 ~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 244 FQLNYLQHLSLSRCY 258 (336)
T ss_dssp GGCTTCCEEECTTCT
T ss_pred hCCCCCCEeeCCCCC
Confidence 777777777777764
No 318
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=99.26 E-value=1.4e-11 Score=93.39 Aligned_cols=65 Identities=11% Similarity=0.260 Sum_probs=54.1
Q ss_pred HHHHHHHHHhC-CCCCC-cccHHHHHHHHHH-----hCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 371 KEVVDAFKAAD-TTKSG-TVPAKYLKHVLVN-----WGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 371 ~~~~~~f~~~D-~~~~G-~is~~ef~~~l~~-----~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
++++.+|+.|| +||+| +|+.+||+++++. ++...++++++.+++.+|.|+||.|+|+||+.+|.+
T Consensus 11 ~~l~~~F~~fd~~dgdgG~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~ 82 (98)
T 3n22_A 11 AVLVTTFHKYSSQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLAL 82 (98)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHCHHHHCSSCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 46778898886 78885 9999999998886 456778888999999999999999999999888754
No 319
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=99.26 E-value=1.5e-11 Score=95.09 Aligned_cols=84 Identities=18% Similarity=0.314 Sum_probs=67.9
Q ss_pred ccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHH
Q psy2947 351 LSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFV 430 (441)
Q Consensus 351 i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~ 430 (441)
++++++.+.+...... ..+.++.+|+.+|.+++|.|+.+||+.+++.+|..+++++++.++..+|.|++|.|+|+||+
T Consensus 6 ~~~~~~~~~l~~~~~~--~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~ 83 (105)
T 1wlz_A 6 TADRDILARLHKAVTS--HYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFL 83 (105)
T ss_dssp TCCHHHHHHHHHHHHH--THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHH
T ss_pred hhHHHHHHHHHHHHHc--hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHH
Confidence 4455555555443221 24678899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcc
Q psy2947 431 KIACAP 436 (441)
Q Consensus 431 ~~l~~~ 436 (441)
.++...
T Consensus 84 ~~~~~~ 89 (105)
T 1wlz_A 84 SRFSSE 89 (105)
T ss_dssp HHHC--
T ss_pred HHHhcc
Confidence 988643
No 320
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=99.26 E-value=7.6e-12 Score=90.64 Aligned_cols=68 Identities=24% Similarity=0.400 Sum_probs=62.4
Q ss_pred hHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhccC
Q psy2947 370 PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAPV 437 (441)
Q Consensus 370 ~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~~ 437 (441)
.+.++.+|+.+|.+++|.|+.+||+.+++.+|..+++++++.+++.+|.+++|.|+|+||+.++.+.+
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 73 (77)
T 2joj_A 6 KQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTEKI 73 (77)
T ss_dssp HHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTHHH
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHh
Confidence 35678899999999999999999999999999999999999999999999999999999999987543
No 321
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=99.26 E-value=1.6e-11 Score=90.88 Aligned_cols=69 Identities=19% Similarity=0.294 Sum_probs=63.5
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhccCCC
Q psy2947 371 KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAPVPD 439 (441)
Q Consensus 371 ~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~~~~ 439 (441)
+.++.+|+.+|.+++|.|+.+||+.+++.+|..+++++++.+++.+|.|++|.|+|+||+.++.+.+.+
T Consensus 14 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~ 82 (85)
T 2ktg_A 14 QEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTIMLEYGQE 82 (85)
T ss_dssp HHHHHHHHHTCTTCCSEEEHHHHHHHHHTTSSCCCHHHHHHHHHHHSSSSCSEEEHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcc
Confidence 467889999999999999999999999999999999999999999999999999999999999776543
No 322
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=99.25 E-value=3e-11 Score=101.56 Aligned_cols=67 Identities=19% Similarity=0.245 Sum_probs=59.8
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
.+.+..+|+.+|.|++|.|+.+||..++... +.....+++..+|+.+|.|++|.|+++||..++...
T Consensus 94 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~~ 160 (166)
T 2mys_B 94 EDVIMGAFKVLDPDGKGSIKKSFLEELLTTG-GGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHG 160 (166)
T ss_pred HHHHHHHHHHhCCCCCcceeHHHHHHHHHHc-CCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHhc
Confidence 4668889999999999999999999999876 445667889999999999999999999999999763
No 323
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=99.25 E-value=1.9e-11 Score=91.54 Aligned_cols=68 Identities=22% Similarity=0.372 Sum_probs=62.7
Q ss_pred hHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhccC
Q psy2947 370 PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAPV 437 (441)
Q Consensus 370 ~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~~ 437 (441)
...++.+|+.+|.+++|.|+.+||+.+++.+|..+++++++.+++.+|.|++|.|+|+||+.++.+.+
T Consensus 19 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~~ 86 (90)
T 1avs_A 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQM 86 (90)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHHh
Confidence 35678899999999999999999999999999999999999999999999999999999999987653
No 324
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=99.24 E-value=8.2e-12 Score=88.88 Aligned_cols=66 Identities=27% Similarity=0.548 Sum_probs=61.5
Q ss_pred hHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 370 PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 370 ~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.+.++.+|+.+|.+++|.|+.+||+.+++.+|..+++++++.+++.+|.+++|.|+|+||+.++.+
T Consensus 5 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 70 (71)
T 2b1u_A 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ 70 (71)
T ss_dssp HHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHTC
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 567889999999999999999999999999999999999999999999999999999999998854
No 325
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=99.24 E-value=4.3e-12 Score=103.97 Aligned_cols=96 Identities=10% Similarity=0.044 Sum_probs=50.8
Q ss_pred HHHHHHHhCCCcccHHHHHHHHHhhcC----CCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhcc-------CCCCh
Q psy2947 302 ELKKYLAEKGGKLSFPDFLKVMHTHSK----AEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSK-------AEDIP 370 (441)
Q Consensus 302 ~~~~~~~~~~g~i~~~ef~~~~~~~~~----~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~-------~~~~~ 370 (441)
.+..++.+++|.|+++||..++..... .....+.++.+|+.||.|++|.|+++||..++..... .....
T Consensus 32 ~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s~ 111 (143)
T 3a4u_B 32 QPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSE 111 (143)
T ss_dssp -------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------CCH
T ss_pred HHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCCCCH
Confidence 455566788999999999988875532 1234578999999999999999999999998876531 23334
Q ss_pred HHH----HHHHHHhCCCCCCcccHHHHHHHH
Q psy2947 371 KEV----VDAFKAADTTKSGTVPAKYLKHVL 397 (441)
Q Consensus 371 ~~~----~~~f~~~D~~~~G~is~~ef~~~l 397 (441)
+++ +.+|+.+|.|+||.|+++||..++
T Consensus 112 ~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 112 DELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred HHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 455 556699999999999999998876
No 326
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=99.24 E-value=2.1e-11 Score=105.06 Aligned_cols=100 Identities=12% Similarity=0.111 Sum_probs=79.1
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHH-----HHHHhhccCCCChH-----HHHHHHHHhCCCCCCcccHHHHHHHHHHhCC-
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFL-----KVMHTHSKAEDIPK-----EVVDAFKAADTTKSGTVPAKYLKHVLVNWGE- 402 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~-----~~~~~~~~~~~~~~-----~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~- 402 (441)
.+++.+|+.+|.|++|.|+.+||. .++..+. ...... .+..+|+.+|.+++|.|+++||..++.....
T Consensus 16 ~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g-~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~ 94 (191)
T 1uhk_A 16 GRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLG-ATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATD 94 (191)
T ss_dssp HHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSC-CCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcC-CCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHHHhcc
Confidence 568899999999999999999999 5665542 222233 5888999999999999999999998875311
Q ss_pred ------CCCHHHHH----HHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 403 ------GLSSKEVD----QIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 403 ------~l~~~~~~----~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
....+.++ .+|+.+|.|++|.|+.+||..++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~ 136 (191)
T 1uhk_A 95 ELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTK 136 (191)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence 11112233 899999999999999999998874
No 327
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=99.23 E-value=5.1e-12 Score=104.50 Aligned_cols=101 Identities=19% Similarity=0.187 Sum_probs=84.8
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCC--CCCcccHHHHHHHHHHhCC---CCCHHH
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTT--KSGTVPAKYLKHVLVNWGE---GLSSKE 408 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~--~~G~is~~ef~~~l~~~~~---~l~~~~ 408 (441)
.+++.+|+.+|.|++|.|+.+||..++..+ ......+.+..+|+.+|.+ ++|.|+++||..++..... +-..+.
T Consensus 10 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~ 88 (151)
T 1w7j_B 10 EEFKEAFELFDRVGDGKILYSQCGDVMRAL-GQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYED 88 (151)
T ss_dssp -CHHHHHHHHCCSSSSEEESTTHHHHHHHT-TCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------C
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHc-CCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCCCcHHH
Confidence 458899999999999999999999999876 3445578899999999999 9999999999999987642 123456
Q ss_pred HHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 409 VDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 409 ~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+..+|+.+|.|++|.|+.+||..++..
T Consensus 89 l~~~F~~~D~d~~G~I~~~el~~~l~~ 115 (151)
T 1w7j_B 89 YLEGFRVFDKEGNGKVMGAELRHVLTT 115 (151)
T ss_dssp CHHHHHTTCTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 788999999999999999999998854
No 328
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=99.23 E-value=1.9e-11 Score=88.73 Aligned_cols=64 Identities=22% Similarity=0.397 Sum_probs=52.7
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 371 KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 371 ~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
++++.+|+.+|.+++|.|+.+||+.+++.+| .+++++++.+++.+|.|++|.|+|+||+.++.+
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 66 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNA 66 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 4577788888888888888888888888888 788888888888888888888888888887754
No 329
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=99.23 E-value=2.2e-11 Score=107.15 Aligned_cols=139 Identities=18% Similarity=0.292 Sum_probs=114.6
Q ss_pred eecccchHHHHHhhhcccc--------C--CCccCHHHHHHHHHHcCCCcCHHHHHHHH-HhCCCc-ccHHHHHHHHHhh
Q psy2947 259 FTFKTPYLEFRECFFLFAR--------N--GTIKTLDELSVIMRSLGMSPTIAELKKYL-AEKGGK-LSFPDFLKVMHTH 326 (441)
Q Consensus 259 ~l~~~~~~~l~~~f~~~d~--------~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~-~~~~g~-i~~~ef~~~~~~~ 326 (441)
.++..++..+.+.|..+|. + |.| +.+|+.. +..++..+...++...+ .+++|. |+++||+.++...
T Consensus 44 ~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I-~~~E~~~-l~~lg~~~~~~~lf~~~D~d~dG~~I~f~EF~~~~~~~ 121 (214)
T 2l4h_A 44 FLTKQEILLAHRRFCELLPQEQRSVESSLRAQV-PFEQILS-LPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVF 121 (214)
T ss_dssp SCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEE-CHHHHTT-CHHHHTSTTHHHHHHHHCCSSSCCSEEHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhCcccccccccccCCcC-CHHHHHH-hhccCCChHHHHHHHHhCcCCCCCEecHHHHHHHHHHH
Confidence 4567788888999999887 6 999 8999998 88888888777665555 468999 9999999999877
Q ss_pred cCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhcc----CCCChHHHH----HHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 327 SKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSK----AEDIPKEVV----DAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 327 ~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~----~~~~~~~~~----~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
.......+.++.+|+.||.|++|.|+.+||..++..... .....++++ .+|+.+|.|++|.|+++||..++.
T Consensus 122 ~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 201 (214)
T 2l4h_A 122 SDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS 201 (214)
T ss_dssp SSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence 655455779999999999999999999999999987643 123334444 599999999999999999999986
Q ss_pred H
Q psy2947 399 N 399 (441)
Q Consensus 399 ~ 399 (441)
.
T Consensus 202 ~ 202 (214)
T 2l4h_A 202 R 202 (214)
T ss_dssp T
T ss_pred h
Confidence 4
No 330
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=99.22 E-value=1.6e-11 Score=101.55 Aligned_cols=85 Identities=9% Similarity=0.113 Sum_probs=46.6
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHH
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQI 412 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l 412 (441)
.++++.+|+.||.|++|.|+.+||..++... ......++++.+|+.+|.+++|.|+++||..++... .+++..+
T Consensus 49 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~i~~a 122 (150)
T 2jjz_A 49 LTAFKEKYMEFDLNNEGEIDLMSLKRMMEKL-GVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK-----RSAVLKL 122 (150)
T ss_dssp HHHHHHHHTTSCCCTTSSBCHHHHHHHHHHT-TCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS-----SCCHHHH
T ss_pred HHHHHHHHHHhCCCCcCcCCHHHHHHHHHHc-CCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh-----HHHHHHH
Confidence 3556666666666666666666666666554 223345566666666666666666666666666542 2335566
Q ss_pred HHHhCCCCCCc
Q psy2947 413 FREANVTMNSK 423 (441)
Q Consensus 413 ~~~~d~d~dg~ 423 (441)
|+.+|.+++|.
T Consensus 123 F~~~D~d~~G~ 133 (150)
T 2jjz_A 123 VMMFEGKANES 133 (150)
T ss_dssp HHC--------
T ss_pred HHHHcCCCCCC
Confidence 66666666664
No 331
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=99.22 E-value=2.5e-11 Score=94.17 Aligned_cols=65 Identities=11% Similarity=0.270 Sum_probs=52.5
Q ss_pred HHHHHHHHHhC-CCCCC-cccHHHHHHHHHH-----hCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 371 KEVVDAFKAAD-TTKSG-TVPAKYLKHVLVN-----WGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 371 ~~~~~~f~~~D-~~~~G-~is~~ef~~~l~~-----~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
++++.+|+.|| +|++| +|+.+||+.+++. +|..+++++++.+++.+|.|+||.|+|+||+.+|.+
T Consensus 22 ~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~ 93 (113)
T 2lnk_A 22 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 93 (113)
T ss_dssp HHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 46777888888 78886 8888888888876 666677888888888888888888888888887743
No 332
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=99.22 E-value=2.7e-11 Score=98.74 Aligned_cols=96 Identities=11% Similarity=0.077 Sum_probs=81.4
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCC---CCHHHHH
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEG---LSSKEVD 410 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~---l~~~~~~ 410 (441)
.+++.+|+.+|.|++|.|+.+||..++..+. .....+.+..+|. +++|.|+++||..++...... -..+.+.
T Consensus 5 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~ 79 (140)
T 1ggw_A 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACG-QNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFV 79 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHHTS-CCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcC-CCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcccHHHHH
Confidence 4578999999999999999999999998873 3445677777776 899999999999999775432 2348899
Q ss_pred HHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 411 QIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 411 ~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
.+|+.+|.|++|.|+.+||..++.
T Consensus 80 ~~F~~~D~d~~G~i~~~el~~~l~ 103 (140)
T 1ggw_A 80 KGFQVFDKDATGMIGVGELRYVLT 103 (140)
T ss_dssp HHHHTTCSSCSSCCCHHHHHHHHH
T ss_pred HHHHHhCCCCCCcEeHHHHHHHHH
Confidence 999999999999999999999875
No 333
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=99.22 E-value=4.5e-11 Score=89.83 Aligned_cols=65 Identities=38% Similarity=0.701 Sum_probs=44.9
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 371 KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 371 ~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+.++.+|+.+|.+++|.|+.+||+.+++.+|..+++++++.+++.+|.|++|.|+|+||+.++.+
T Consensus 9 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~ 73 (92)
T 2kn2_A 9 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMT 73 (92)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 45666677777777777777777777777666667777777777777777777777777766644
No 334
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=99.22 E-value=3e-11 Score=92.36 Aligned_cols=65 Identities=9% Similarity=0.211 Sum_probs=46.7
Q ss_pred HHHHHHHHHhC-CCCC-CcccHHHHHHHHHH-hC----CCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 371 KEVVDAFKAAD-TTKS-GTVPAKYLKHVLVN-WG----EGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 371 ~~~~~~f~~~D-~~~~-G~is~~ef~~~l~~-~~----~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
++++.+|+.|| .||+ |+|+.+||+.+|+. +| ..+++++++.+++.+|.|+||.|+|+||+.+|.+
T Consensus 13 ~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~ 84 (104)
T 3zwh_A 13 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSS 84 (104)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 45667777776 5664 67888888887775 43 3456777888888888888888888888777643
No 335
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=99.22 E-value=9.3e-13 Score=104.77 Aligned_cols=84 Identities=10% Similarity=0.252 Sum_probs=52.0
Q ss_pred CCcccHHHHHH-----HHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCC
Q psy2947 348 SGKLSFPDFLK-----VMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNS 422 (441)
Q Consensus 348 ~g~i~~~ef~~-----~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg 422 (441)
+|.|+++||.. ++..........++++.+|+.|| |+|+.+|++.+++.+|. ++++++.+++.+|.|++|
T Consensus 22 ~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l~~lG~--t~~ei~~~~~~~D~d~dG 95 (123)
T 2kld_A 22 KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDLKGKGH--TDAEIEAIFTKYDQDGDQ 95 (123)
T ss_dssp -----------------------------CCSCSSTTTT----TCEEHHHHHHHTTTCCS--SHHHHHHHHHHHSSSSCC
T ss_pred CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHHHHhCC--CHHHHHHHHHHHcCCCCC
Confidence 45555555555 33322111222345667888888 99999999999988886 889999999999999999
Q ss_pred ceeHHHHHHHHhccC
Q psy2947 423 KVRYEDFVKIACAPV 437 (441)
Q Consensus 423 ~i~~~ef~~~l~~~~ 437 (441)
.|+|+||+.+|....
T Consensus 96 ~I~~~EF~~~~~~~~ 110 (123)
T 2kld_A 96 ELTEHEHQQMRDDLE 110 (123)
T ss_dssp EECSHHHHHCSCTTT
T ss_pred cCcHHHHHHHHHHHH
Confidence 999999999885543
No 336
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.22 E-value=7e-11 Score=122.30 Aligned_cols=119 Identities=10% Similarity=0.180 Sum_probs=104.0
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCC-------CCCcccHHHHHHHHHhhccCCCChHHHHHHHHHh
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTT-------KSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAA 380 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d-------~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~ 380 (441)
.+++|+|+++|+..++.. ..+.+..+|+.+|.+ ++|.|+++||.+++..+.. ..+++.+|+.|
T Consensus 163 ~n~dGkIs~kel~~~l~~------~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~----R~EI~eiF~~y 232 (885)
T 3ohm_B 163 VNQDGRIPVKNILKMFSA------DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCL----RPDIDKILLEI 232 (885)
T ss_dssp CCTTSCEEHHHHHHTTGG------GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSC----CHHHHHHHHHT
T ss_pred cCCCCccCHHHHHHHHhc------CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCC----HHHHHHHHHHH
Confidence 468899999999988873 356788899999987 8899999999999987732 46899999999
Q ss_pred CCCCCCcccHHHHHHHHHHhC-C---------CCCHHHHHHHHHHhCCC----CCCceeHHHHHHHHhcc
Q psy2947 381 DTTKSGTVPAKYLKHVLVNWG-E---------GLSSKEVDQIFREANVT----MNSKVRYEDFVKIACAP 436 (441)
Q Consensus 381 D~~~~G~is~~ef~~~l~~~~-~---------~l~~~~~~~l~~~~d~d----~dg~i~~~ef~~~l~~~ 436 (441)
|.+++|.||.+||+++|+..+ . .++.+++++|+++++.+ ++|.|++++|.++|...
T Consensus 233 dsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~yL~S~ 302 (885)
T 3ohm_B 233 GAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYLGGE 302 (885)
T ss_dssp TCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHTST
T ss_pred hcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhhccCc
Confidence 999999999999999999975 3 37889999999999988 78999999999999754
No 337
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=99.21 E-value=2.9e-11 Score=90.70 Aligned_cols=65 Identities=9% Similarity=0.208 Sum_probs=51.1
Q ss_pred HHHHHHHHHhC-CCCC-CcccHHHHHHHHHH-hC----CCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 371 KEVVDAFKAAD-TTKS-GTVPAKYLKHVLVN-WG----EGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 371 ~~~~~~f~~~D-~~~~-G~is~~ef~~~l~~-~~----~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+.++.+|+.|| .||+ |+|+.+||+++++. +| .+.++++++.+++.+|.|+||.|+|+||+.+|.+
T Consensus 10 ~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~ 81 (93)
T 4eto_A 10 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 81 (93)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 46778888887 5774 78999999888885 44 3457888888999999888999999999888754
No 338
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=99.21 E-value=6e-12 Score=88.20 Aligned_cols=62 Identities=18% Similarity=0.237 Sum_probs=55.2
Q ss_pred HHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 374 VDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 374 ~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+.+|+.+|.|++|.|+.+||+.+++.+|..+++++++.+|+.+|.|++|.|+|+||+.++.+
T Consensus 3 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp CHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred HHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 46899999999999999999999998887788888999999999999999999999988864
No 339
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=99.20 E-value=2.8e-11 Score=104.61 Aligned_cols=100 Identities=9% Similarity=0.107 Sum_probs=74.2
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHH-----HHHHhhccCCCChH-----HHHHHHHHhCCCCCCcccHHHHHHHHHHhCC-
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFL-----KVMHTHSKAEDIPK-----EVVDAFKAADTTKSGTVPAKYLKHVLVNWGE- 402 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~-----~~~~~~~~~~~~~~-----~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~- 402 (441)
..++.+|+.+|.|++|.|+.+||. .++..+. ...... .+..+|+.+|.+++|.|+++||..++.....
T Consensus 20 ~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g-~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~ 98 (195)
T 1qv0_A 20 KRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLE-ATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATS 98 (195)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTT-CCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcC-CCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHHHHHHHhh
Confidence 467889999999999999999999 4555542 222222 5888999999999999999999998865321
Q ss_pred ------CCCHHHHH----HHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 403 ------GLSSKEVD----QIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 403 ------~l~~~~~~----~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
.-..+.++ .+|+.+|.|++|.|+.+||..++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 140 (195)
T 1qv0_A 99 ELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGK 140 (195)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHH
T ss_pred hhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence 01112233 899999999999999999999885
No 340
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=99.20 E-value=3.1e-11 Score=103.30 Aligned_cols=139 Identities=18% Similarity=0.289 Sum_probs=116.7
Q ss_pred eecccchHHHHHhhhcccc--------C--CCccCHHHHHHHHHHcCCCcCHHHHHHHH-HhCCCc-ccHHHHHHHHHhh
Q psy2947 259 FTFKTPYLEFRECFFLFAR--------N--GTIKTLDELSVIMRSLGMSPTIAELKKYL-AEKGGK-LSFPDFLKVMHTH 326 (441)
Q Consensus 259 ~l~~~~~~~l~~~f~~~d~--------~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~-~~~~g~-i~~~ef~~~~~~~ 326 (441)
.++..++..+.+.|..+|. + |.| +..++.. ++.++..++..++..++ .+++|. |+++||..++...
T Consensus 13 ~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i-~~~el~~-l~~~g~~~~~~~l~~~~D~d~~G~~I~~~EF~~~~~~~ 90 (183)
T 1dgu_A 13 FLTKQEILLAHRRFCELLPQEQRSVESSLRAQV-PFEQILS-LPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVF 90 (183)
T ss_dssp SCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCS-CHHHHHT-STTSSSCTTHHHHHHHHSCSSSSCCCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCccccccccccccCcC-cHHHHHH-HHhhhcCcHHHHHHHHhCCCCCCCEecHHHHHHHHHHh
Confidence 4678889999999999987 5 889 8999999 88888888877766655 478999 9999999999877
Q ss_pred cCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhcc----CCCChHHHHH----HHHHhCCCCCCcccHHHHHHHHH
Q psy2947 327 SKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSK----AEDIPKEVVD----AFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 327 ~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~----~~~~~~~~~~----~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
.......+.++.+|+.||.|++|.|+.+||..++..... .....+++.. +|+.+|.|++|.|+++||..++.
T Consensus 91 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~ 170 (183)
T 1dgu_A 91 SDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS 170 (183)
T ss_dssp STTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHHHHC
T ss_pred cCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 655555679999999999999999999999999987643 1233455554 99999999999999999999986
Q ss_pred H
Q psy2947 399 N 399 (441)
Q Consensus 399 ~ 399 (441)
.
T Consensus 171 ~ 171 (183)
T 1dgu_A 171 R 171 (183)
T ss_dssp S
T ss_pred h
Confidence 4
No 341
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=99.19 E-value=7.5e-11 Score=98.02 Aligned_cols=66 Identities=15% Similarity=0.170 Sum_probs=58.8
Q ss_pred CHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 332 IPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 332 ~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
..+.+..+|+.+|.|++|.|+.+||+.++... +.....+++..+|+.+|.+ +|.|+++||.+++..
T Consensus 85 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~ 150 (156)
T 1wdc_B 85 SEETIRNAFAMFDEQETKKLNIEYIKDLLENM-GDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKG 150 (156)
T ss_dssp CHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHS-SSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHT
T ss_pred hHHHHHHHHHHHCcCCCCccCHHHHHHHHHHh-CCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhc
Confidence 34668889999999999999999999999876 4456678999999999999 999999999999975
No 342
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=99.19 E-value=4.7e-11 Score=88.46 Aligned_cols=65 Identities=22% Similarity=0.377 Sum_probs=51.7
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhcc
Q psy2947 371 KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 371 ~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~ 436 (441)
+.++.+|+.+|.+++|.|+.+||+.+++.+| .+++++++.+++.+|.|++|.|+|+||+.++.+.
T Consensus 11 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 75 (86)
T 2opo_A 11 ADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 75 (86)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence 4567778888888888888888888888877 7788888888888888888888888888777543
No 343
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=99.18 E-value=2.2e-11 Score=89.11 Aligned_cols=67 Identities=22% Similarity=0.349 Sum_probs=61.1
Q ss_pred ChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhC-CCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhcc
Q psy2947 369 IPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWG-EGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 369 ~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~-~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~ 436 (441)
..+.++ +|+.+|.+++|.|+.+||+.+++.+| ..+++++++.+++.+|.|++|.|+|+||+.++.+.
T Consensus 7 ~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 74 (81)
T 1c7v_A 7 EEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKS 74 (81)
T ss_dssp CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC
T ss_pred HHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhh
Confidence 357788 99999999999999999999999999 88999999999999999999999999999988765
No 344
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=99.18 E-value=5.4e-11 Score=100.73 Aligned_cols=100 Identities=10% Similarity=0.162 Sum_probs=81.4
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHhhcc---CCCChHH-H--------HHHHHHhCCCCCCcccHHHHHHHHHHhC
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFLKVMHTHSK---AEDIPKE-V--------VDAFKAADTTKSGTVPAKYLKHVLVNWG 401 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~---~~~~~~~-~--------~~~f~~~D~~~~G~is~~ef~~~l~~~~ 401 (441)
.+++.+|+.+|.|++|.|+.+||..++..... ......+ + +.+|+.+| ++|.|+++||..++....
T Consensus 6 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~~~~~ 83 (174)
T 1q80_A 6 QKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSMKEMV 83 (174)
T ss_dssp HHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHHHHHc
Confidence 56889999999999999999999999887641 2333334 4 45788899 999999999999998764
Q ss_pred CC-----CCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 402 EG-----LSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 402 ~~-----l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.. ...+.+..+|+.+|.|++|.|+.+||..++..
T Consensus 84 ~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~ 122 (174)
T 1q80_A 84 KNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGM 122 (174)
T ss_dssp TSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Confidence 31 12467889999999999999999999998753
No 345
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.17 E-value=6.3e-13 Score=115.61 Aligned_cols=134 Identities=14% Similarity=0.215 Sum_probs=106.5
Q ss_pred cCcccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEccCCCCCccchhhcCCC
Q psy2947 73 IGRRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLDALPGFLLSMP 152 (441)
Q Consensus 73 i~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~ 152 (441)
+|..+..+++|++|++++|.++.+| .+..+++|+.|++++|.++ .+|..+..+++|++|++++|+++.+| .+..++
T Consensus 40 l~~~~~~l~~L~~L~ls~n~l~~l~-~~~~l~~L~~L~l~~n~l~--~l~~~~~~~~~L~~L~L~~N~l~~l~-~~~~l~ 115 (198)
T 1ds9_A 40 MDATLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIK--KIENLDAVADTLEELWISYNQIASLS-GIEKLV 115 (198)
T ss_dssp CHHHHHHTTTCSEEECSEEEESCCC-CHHHHTTCCEEEEEEEEEC--SCSSHHHHHHHCSEEEEEEEECCCHH-HHHHHH
T ss_pred hhHHHhcCCCCCEEECCCCCCcccc-ccccCCCCCEEECCCCCcc--cccchhhcCCcCCEEECcCCcCCcCC-ccccCC
Confidence 4447888999999999999999998 8999999999999999998 89988888899999999999999988 588899
Q ss_pred CCCEEEccCCcCccCcccccccccccccccccchhHHH-HhhcccccCCc-----------hhhhhhhhcccccccccCC
Q psy2947 153 QLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLHQPS-----------RLQDLAVQSVIASKENFFE 220 (441)
Q Consensus 153 ~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~~p~-----------~l~~l~~l~~l~l~~n~~~ 220 (441)
+|+.|++++|++..... ...+..++.+..+ +.+|.+...++ .+..++.|+.++ ++++.
T Consensus 116 ~L~~L~l~~N~i~~~~~--------~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 116 NLRVLYMSNNKITNWGE--------IDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HSSEEEESEEECCCHHH--------HHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCCEEECCCCcCCchhH--------HHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 99999999999743221 1245556666656 66676644322 267777887775 55544
No 346
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=99.17 E-value=7.2e-11 Score=88.62 Aligned_cols=64 Identities=16% Similarity=0.330 Sum_probs=56.3
Q ss_pred HHHHHHHHHhCCCCCC---cccHHHHHHHHHH-----hCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 371 KEVVDAFKAADTTKSG---TVPAKYLKHVLVN-----WGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 371 ~~~~~~f~~~D~~~~G---~is~~ef~~~l~~-----~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+.++.+|+.|| +++| +|+.+||+.+++. +|..+++++++.+++.+|.|+||.|+|+||+.++.+
T Consensus 9 ~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 80 (92)
T 3rm1_A 9 VALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAM 80 (92)
T ss_dssp HHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 46778999999 6666 9999999999998 888889999999999999999999999999988754
No 347
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=99.17 E-value=6.7e-11 Score=88.83 Aligned_cols=62 Identities=16% Similarity=0.289 Sum_probs=54.5
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 371 KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 371 ~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
++++.+|+.+|+|++|+|+.+|++.+++..| +++++++.+++.+|.|++|.|+|+||+.+|.
T Consensus 9 ~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~ 70 (92)
T 1fi6_A 9 QYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAFH 70 (92)
T ss_dssp HHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 4677889999999999999999999998887 7788899999999999999999999998773
No 348
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=99.17 E-value=7.9e-11 Score=89.54 Aligned_cols=65 Identities=15% Similarity=0.285 Sum_probs=52.0
Q ss_pred HHHHHHHHHhC-CCCCC-cccHHHHHHHHHH-----hCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 371 KEVVDAFKAAD-TTKSG-TVPAKYLKHVLVN-----WGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 371 ~~~~~~f~~~D-~~~~G-~is~~ef~~~l~~-----~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+.++.+|+.|| .|++| +|+.+||+.+++. +|..+++++++.+++.+|.|+||.|+|+||+.++.+
T Consensus 10 ~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 81 (99)
T 2y5i_A 10 DALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAA 81 (99)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 46777888886 78877 8888888888876 566678888888888888888888888888887754
No 349
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.16 E-value=1e-10 Score=110.94 Aligned_cols=79 Identities=20% Similarity=0.133 Sum_probs=70.7
Q ss_pred CEEEccCC-CCCcCCcCccCCCCCcEEEccC-CcCCCCCCc-hhhhcCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEc
Q psy2947 84 EVLSLKSN-SLTSLPPDIGRLTNLRVLCLTD-NCLQNASIP-FTLTFCKNLTHLYLDNNLLDALP-GFLLSMPQLDTVYR 159 (441)
Q Consensus 84 ~~L~l~~n-~l~~lp~~~~~l~~L~~L~l~~-n~l~~~~~p-~~~~~l~~L~~L~l~~n~l~~lp-~~~~~l~~L~~L~l 159 (441)
..++++++ +++.+|. |..+++|+.|+|++ |.|+ .+| ..|..+++|++|+|++|+|+.+| ..|.++++|+.|+|
T Consensus 11 ~~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~--~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 87 (347)
T 2ifg_A 11 SGLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQ--HLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (347)
T ss_dssp SCEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCC--EECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred CEEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCC--CcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeC
Confidence 45688888 9999999 99999999999996 9998 555 57899999999999999998886 67899999999999
Q ss_pred cCCcCc
Q psy2947 160 HGNHNY 165 (441)
Q Consensus 160 ~~N~~~ 165 (441)
++|++.
T Consensus 88 ~~N~l~ 93 (347)
T 2ifg_A 88 SFNALE 93 (347)
T ss_dssp CSSCCS
T ss_pred CCCccc
Confidence 999963
No 350
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=99.16 E-value=5.8e-11 Score=87.99 Aligned_cols=68 Identities=13% Similarity=0.177 Sum_probs=62.1
Q ss_pred hHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHH---HHHHHHHhCCCCCCceeHHHHHHHHhccCC
Q psy2947 370 PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKE---VDQIFREANVTMNSKVRYEDFVKIACAPVP 438 (441)
Q Consensus 370 ~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~---~~~l~~~~d~d~dg~i~~~ef~~~l~~~~~ 438 (441)
.+.++.+|+.+|.+++|.|+.+||+.+++.+|..+++++ +..++..+|.|++|.|+| ||+.++.+.+.
T Consensus 13 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~~~~ 83 (86)
T 1j7q_A 13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSKWVR 83 (86)
T ss_dssp HHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHHHHh
Confidence 456888999999999999999999999999999999999 999999999999999999 99999876543
No 351
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=99.16 E-value=4e-11 Score=91.17 Aligned_cols=62 Identities=15% Similarity=0.158 Sum_probs=51.1
Q ss_pred hHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q psy2947 370 PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIA 433 (441)
Q Consensus 370 ~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l 433 (441)
.+.++.+|+.+|+|++|+|+.+|++.+++..| +++++++.+++.+|.|++|.|+|+||+.+|
T Consensus 10 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~--l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~ 71 (99)
T 1qjt_A 10 NPVYEKYYRQVEAGNTGRVLALDAAAFLKKSG--LPDLILGKIWDLADTDGKGVLSKQEFFVAL 71 (99)
T ss_dssp CTHHHHHHHHHCCTTSSCCCSHHHHHHHHTSS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHH
Confidence 35677888888888888888888888888776 678888888888888888888888888877
No 352
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=99.16 E-value=9.6e-11 Score=87.83 Aligned_cols=64 Identities=11% Similarity=0.325 Sum_probs=58.5
Q ss_pred hHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 370 PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 370 ~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.+.++.+|+.+|.|++|.|+.+||+.+++.+| ++.++++.+|+.+|.|++|.|+|+||+.++.+
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~ 89 (91)
T 2pmy_A 26 LARLRSVFAACDANRSGRLEREEFRALCTELR--VRPADAEAVFQRLDADRDGAITFQEFARGFLG 89 (91)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC--cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 35678899999999999999999999999988 78999999999999999999999999998865
No 353
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=99.15 E-value=2.2e-12 Score=102.56 Aligned_cols=104 Identities=13% Similarity=0.301 Sum_probs=53.5
Q ss_pred HHHcCCCcCHHHHHHHHHhCCCcccHHHHHH-----HHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhcc
Q psy2947 291 MRSLGMSPTIAELKKYLAEKGGKLSFPDFLK-----VMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSK 365 (441)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~g~i~~~ef~~-----~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~ 365 (441)
++.+|..++..++..++...+|.|+++||.. ++..........++++++|+.|| |+|+.+|++.++..+..
T Consensus 2 lr~lG~~~t~~ei~~~~~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l~~lG~ 77 (123)
T 2kld_A 2 STAIGINDTYSEVKSDLAQQKAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDLKGKGH 77 (123)
T ss_dssp -------------------------------------------------CCSCSSTTTT----TCEEHHHHHHHTTTCCS
T ss_pred hhhcCCCCCHHHHHHHHHHcCCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHHHHhCC
Confidence 4566777788888888777799999999999 66654333334466888999999 99999999999987632
Q ss_pred CCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhC
Q psy2947 366 AEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWG 401 (441)
Q Consensus 366 ~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~ 401 (441)
++++++.+|+.+|.|++|.|+++||.+++..+.
T Consensus 78 ---t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 110 (123)
T 2kld_A 78 ---TDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLE 110 (123)
T ss_dssp ---SHHHHHHHHHHHSSSSCCEECSHHHHHCSCTTT
T ss_pred ---CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 678999999999999999999999999986654
No 354
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=99.15 E-value=5.8e-11 Score=89.74 Aligned_cols=62 Identities=16% Similarity=0.241 Sum_probs=54.1
Q ss_pred hHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q psy2947 370 PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIA 433 (441)
Q Consensus 370 ~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l 433 (441)
.++++.+|+.+|+|++|+|+.+|++.+++..| +++++++.+++.+|.|++|.|+|+||+.+|
T Consensus 9 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~ 70 (95)
T 1c07_A 9 KAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAF 70 (95)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHH
Confidence 35677889999999999999999999998876 778889999999999999999999998877
No 355
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=99.15 E-value=4.1e-11 Score=86.46 Aligned_cols=66 Identities=21% Similarity=0.406 Sum_probs=58.8
Q ss_pred hHHHHHHHHHh-CCCCC-CcccHHHHHHHHHHhCCCC--CHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 370 PKEVVDAFKAA-DTTKS-GTVPAKYLKHVLVNWGEGL--SSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 370 ~~~~~~~f~~~-D~~~~-G~is~~ef~~~l~~~~~~l--~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.+.++.+|+.+ |.+++ |.|+.+||+.+++.+|..+ ++++++.+++.+|.|++|.|+|+||+.++.+
T Consensus 4 ~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~ 73 (76)
T 1qx2_A 4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK 73 (76)
T ss_dssp HHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 46788899999 99999 9999999999999988888 8888999999999999999999999988754
No 356
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=99.15 E-value=6.5e-11 Score=89.38 Aligned_cols=65 Identities=17% Similarity=0.374 Sum_probs=48.3
Q ss_pred HHHHHHHHHhC-CCC-CCcccHHHHHHHHHH-----hCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 371 KEVVDAFKAAD-TTK-SGTVPAKYLKHVLVN-----WGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 371 ~~~~~~f~~~D-~~~-~G~is~~ef~~~l~~-----~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+.++.+|+.|| .|+ +|+|+.+||+.+++. +|..+++++++.+++.+|.|+||.|+|+||+.+|.+
T Consensus 9 ~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 80 (95)
T 1j55_A 9 GMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (95)
T ss_dssp HHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 46777888888 687 478888888888876 455667788888888888888888888888887754
No 357
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.14 E-value=4.1e-12 Score=121.37 Aligned_cols=103 Identities=22% Similarity=0.187 Sum_probs=53.9
Q ss_pred CcccEEeccCCCcCc--------ccCCC-CCCCEEEccCCCCCcCCcC-----ccC-CCCCcEEEccCCcCCCCC----C
Q psy2947 61 SHAFLLSLSYTPIGR--------RIFKC-DTVEVLSLKSNSLTSLPPD-----IGR-LTNLRVLCLTDNCLQNAS----I 121 (441)
Q Consensus 61 ~~L~~l~l~~n~i~~--------~~~~l-~~L~~L~l~~n~l~~lp~~-----~~~-l~~L~~L~l~~n~l~~~~----~ 121 (441)
++|+.|+|++|.+.. .+..+ ++|++|+|++|+++..+.. +.. .++|++|++++|.++ .. +
T Consensus 80 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~-~~~~~~l 158 (362)
T 3goz_A 80 ANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLG-IKSSDEL 158 (362)
T ss_dssp TTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGG-GSCHHHH
T ss_pred CCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCC-HHHHHHH
Confidence 566667777665431 12233 5666666666666644432 222 246666666666665 21 1
Q ss_pred chhhhcCC-CCCEEEccCCCCCccc-----hhhcCC-CCCCEEEccCCcC
Q psy2947 122 PFTLTFCK-NLTHLYLDNNLLDALP-----GFLLSM-PQLDTVYRHGNHN 164 (441)
Q Consensus 122 p~~~~~l~-~L~~L~l~~n~l~~lp-----~~~~~l-~~L~~L~l~~N~~ 164 (441)
+..+..++ +|++|+|++|+|+..+ ..+..+ ++|+.|+|++|.+
T Consensus 159 ~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i 208 (362)
T 3goz_A 159 IQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLL 208 (362)
T ss_dssp HHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCG
T ss_pred HHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCC
Confidence 22233333 6666666666664433 123334 3666666666664
No 358
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=99.14 E-value=1.3e-10 Score=89.97 Aligned_cols=68 Identities=16% Similarity=0.267 Sum_probs=63.0
Q ss_pred hHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhccC
Q psy2947 370 PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAPV 437 (441)
Q Consensus 370 ~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~~ 437 (441)
.+.++.+|+.+|.|++|.|+.+||+.++..+|..+++++++.+++.+|.|++|.|+|+||+.++.+..
T Consensus 31 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~~ 98 (107)
T 2d58_A 31 LEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR 98 (107)
T ss_dssp HHHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSSS
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcc
Confidence 35678899999999999999999999999999999999999999999999999999999999987653
No 359
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=99.14 E-value=8.7e-11 Score=89.44 Aligned_cols=64 Identities=20% Similarity=0.185 Sum_probs=57.7
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHH
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVL 397 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l 397 (441)
.++++++|+.||.|++|.|+.+||+.++..+ +....+++++.+|+.+|.|++|.|+++||.++|
T Consensus 35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~l-g~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m 98 (100)
T 2lv7_A 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSL-GYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98 (100)
T ss_dssp HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHH-TCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHh-CCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence 4678999999999999999999999999987 445557789999999999999999999999886
No 360
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=99.14 E-value=3e-11 Score=94.71 Aligned_cols=66 Identities=17% Similarity=0.215 Sum_probs=40.1
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHhh----ccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFLKVMHTH----SKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~----~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
+.++.+|+.||.| +|+|+.+|+++++... ......++.++.+|+.+|.|+||.|+++||..+|..+
T Consensus 15 e~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l 84 (121)
T 4drw_A 15 ETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 84 (121)
T ss_dssp HHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 4556666666665 5666666666666541 1333345566666666666666666666666666554
No 361
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=99.13 E-value=6.1e-11 Score=92.93 Aligned_cols=63 Identities=14% Similarity=0.293 Sum_probs=44.6
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHH-----hCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 371 KEVVDAFKAADTTKSGTVPAKYLKHVLVN-----WGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 371 ~~~~~~f~~~D~~~~G~is~~ef~~~l~~-----~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
+.+..+|+.||.| +|+|+.+||+++|+. ++...++++++.+++.+|.|+||.|+|+||+.+|.
T Consensus 15 e~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~ 82 (121)
T 4drw_A 15 ETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIA 82 (121)
T ss_dssp HHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence 4566677777766 677777777777764 56666777777777777777777777777777664
No 362
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=99.13 E-value=5.1e-11 Score=89.99 Aligned_cols=65 Identities=17% Similarity=0.328 Sum_probs=54.7
Q ss_pred HHHHHHHHHhC-CCCCC-cccHHHHHHHHHH-----hCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 371 KEVVDAFKAAD-TTKSG-TVPAKYLKHVLVN-----WGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 371 ~~~~~~f~~~D-~~~~G-~is~~ef~~~l~~-----~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
++++.+|+.|| +|++| +|+.+||+.+++. +|..+++++++.+++.+|.|+||.|+|+||+.++.+
T Consensus 12 ~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 83 (95)
T 2wcb_A 12 EGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 83 (95)
T ss_dssp HHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 46778899998 78887 9999999999876 556678888999999999999999999999888754
No 363
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=99.13 E-value=4.8e-12 Score=111.88 Aligned_cols=122 Identities=16% Similarity=0.186 Sum_probs=83.7
Q ss_pred CcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHH----HHHHHHh-----CC
Q psy2947 312 GKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEV----VDAFKAA-----DT 382 (441)
Q Consensus 312 g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~----~~~f~~~-----D~ 382 (441)
+.++++++...+..... ......++.+|+.+|.|++|.|+++||..++..........+++ ..+|..+ |.
T Consensus 27 ~~~~~~~l~~~~~~~ls-~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (219)
T 3cs1_A 27 RKEAWERIRQAIPREKT-AEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKL 105 (219)
T ss_dssp HHHHHHHHHHHSCCSSS-HHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCC-HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhcc
Confidence 34555555554331110 11235688999999999999999999999887632222222223 3333322 34
Q ss_pred CCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 383 TKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 383 ~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
+++|.|+++||..++.......+.+++..+|+.+|.|++|.|+.+||..++.
T Consensus 106 d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~ 157 (219)
T 3cs1_A 106 ENKGSEDFVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVP 157 (219)
T ss_dssp HTSCCCSSBCHHHHHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 8999999999999875433222456799999999999999999999999884
No 364
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=99.13 E-value=4.6e-10 Score=97.17 Aligned_cols=97 Identities=12% Similarity=0.057 Sum_probs=84.6
Q ss_pred CHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh-CCCCCHHHHH
Q psy2947 332 IPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW-GEGLSSKEVD 410 (441)
Q Consensus 332 ~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~-~~~l~~~~~~ 410 (441)
....++.+|+.+|.|++|.|+.+||..++..+. .......+..+|..+ +|.|+++||..++... ......+.+.
T Consensus 55 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg-~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~~~~l~ 129 (196)
T 3dtp_E 55 QVQEFKEAFQLIDQDKDGFISKNDIRATFDSLG-RLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDEEDVIV 129 (196)
T ss_dssp THHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTS-CCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCCHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhC-CCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCcHHHHH
Confidence 346789999999999999999999999998873 445577888888777 8999999999999874 3445688899
Q ss_pred HHHHHhCCCCCCceeHHHHHHHH
Q psy2947 411 QIFREANVTMNSKVRYEDFVKIA 433 (441)
Q Consensus 411 ~l~~~~d~d~dg~i~~~ef~~~l 433 (441)
.+|+.+|.|++|.|+.+||..++
T Consensus 130 ~~F~~~D~d~~G~Is~~El~~~l 152 (196)
T 3dtp_E 130 NAFNLFDEGDGKCKEETLKRSLT 152 (196)
T ss_dssp HHHHTTCSSSSCCBHHHHHHHHH
T ss_pred HHHHHHCCCCCCcCcHHHHHHHH
Confidence 99999999999999999999998
No 365
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.12 E-value=1.3e-11 Score=117.91 Aligned_cols=102 Identities=21% Similarity=0.163 Sum_probs=47.0
Q ss_pred cccEEeccCCCcC--------cccCCCC-CCCEEEccCCCCCcC-CcCccCC-----CCCcEEEccCCcCCCCCCchhh-
Q psy2947 62 HAFLLSLSYTPIG--------RRIFKCD-TVEVLSLKSNSLTSL-PPDIGRL-----TNLRVLCLTDNCLQNASIPFTL- 125 (441)
Q Consensus 62 ~L~~l~l~~n~i~--------~~~~~l~-~L~~L~l~~n~l~~l-p~~~~~l-----~~L~~L~l~~n~l~~~~~p~~~- 125 (441)
+|+.|+|++|.+. ..+..++ +|++|+|++|.++.. +..+..+ ++|++|++++|.++ +..+..+
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~-~~~~~~l~ 101 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLS-YKSSDELV 101 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGG-GSCHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCC-hHHHHHHH
Confidence 3555555555332 2233444 555555555555533 2223332 55555555555554 2222222
Q ss_pred ---hcC-CCCCEEEccCCCCCccc-hh----hcC-CCCCCEEEccCCcC
Q psy2947 126 ---TFC-KNLTHLYLDNNLLDALP-GF----LLS-MPQLDTVYRHGNHN 164 (441)
Q Consensus 126 ---~~l-~~L~~L~l~~n~l~~lp-~~----~~~-l~~L~~L~l~~N~~ 164 (441)
..+ ++|++|++++|+|+..+ .. +.. .++|++|++++|.+
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l 150 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDL 150 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcC
Confidence 222 45555555555554443 11 222 23555555555554
No 366
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=99.12 E-value=9.4e-11 Score=97.07 Aligned_cols=66 Identities=12% Similarity=0.103 Sum_probs=59.1
Q ss_pred CHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 332 IPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 332 ~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
..+.+..+|+.+|.|++|.|+.+||..++... +.....+++..+|+.+|. ++|.|+++||.++|..
T Consensus 83 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~~~~~~~~~~~~~~~d~-~dg~I~~~eF~~~~~~ 148 (153)
T 2ovk_B 83 PEDALRNAFSMFDEDGQGFIPEDYLKDLLENM-GDNFSKEEIKNVWKDAPL-KNKQFNYNKMVDIKGK 148 (153)
T ss_dssp CTTHHHHHHHTTCSSCSSCCCHHHHHHHHHHS-SSCCCHHHHHHHHHHCCE-ETTEECHHHHHHHHHC
T ss_pred hHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHc-CCCCCHHHHHHHHHHcCC-CCCEEeHHHHHHHHhc
Confidence 34578899999999999999999999999887 445667899999999999 9999999999999975
No 367
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=99.11 E-value=7.2e-11 Score=86.78 Aligned_cols=66 Identities=26% Similarity=0.402 Sum_probs=59.5
Q ss_pred hHHHHHHHHHhCCCCCCcccHHHHHHHHHHhC--CCCCHHHHHH----HHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 370 PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWG--EGLSSKEVDQ----IFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 370 ~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~--~~l~~~~~~~----l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.+.++.+|+.+|.|++|.|+.+||+.++..+| ..+++++++. +++.+|.|++|.|+|+||+..+..
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~ 77 (83)
T 1yx7_A 6 KAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAE 77 (83)
T ss_dssp CTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHH
Confidence 46788999999999999999999999999999 8888888888 999999999999999999977643
No 368
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=99.11 E-value=1.1e-10 Score=88.68 Aligned_cols=66 Identities=11% Similarity=0.223 Sum_probs=50.0
Q ss_pred HHHHHHHHHhCCCC---CCcccHHHHHHHHHHhC-CCCC----HHHHHHHHHHhCCCCCCceeHHHHHHHHhcc
Q psy2947 371 KEVVDAFKAADTTK---SGTVPAKYLKHVLVNWG-EGLS----SKEVDQIFREANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 371 ~~~~~~f~~~D~~~---~G~is~~ef~~~l~~~~-~~l~----~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~~ 436 (441)
++++.+|+.||.++ +|+|+.+||+.+|+..+ ..++ +++++.+++.+|.|+||.|+|+||+.+|.+.
T Consensus 11 ~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~ 84 (100)
T 3nxa_A 11 IVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGI 84 (100)
T ss_dssp HHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 46777888888753 68888888888887643 3333 6778888888888888888888888887643
No 369
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.11 E-value=4.8e-11 Score=113.34 Aligned_cols=160 Identities=12% Similarity=0.052 Sum_probs=111.5
Q ss_pred cEEeccCC---CcCcccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCch-hhhcCCCCCE-EEcc
Q psy2947 64 FLLSLSYT---PIGRRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPF-TLTFCKNLTH-LYLD 137 (441)
Q Consensus 64 ~~l~l~~n---~i~~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~-~~~~l~~L~~-L~l~ 137 (441)
+.++.+++ .||..+. +++++|+|++|+|+.+|+. |.++++|++|+|++|.+. +.+|. .+.++++|.. +.++
T Consensus 12 ~~v~C~~~~Lt~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~-~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVTEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVL-EVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCCSCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTC-CEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCCccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCC-CccChhHhhcchhhhhhhccc
Confidence 35666665 6776663 6899999999999999976 999999999999999986 46775 4688888775 6677
Q ss_pred CCCCCccc-hhhcCCCCCCEEEccCCcCccCccccccc---------------ccccc-cccccc-hhHHH-Hhhccccc
Q psy2947 138 NNLLDALP-GFLLSMPQLDTVYRHGNHNYFKSTFMWYH---------------SDIHA-RIRSTS-TRDEV-LRKQKKLH 198 (441)
Q Consensus 138 ~n~l~~lp-~~~~~l~~L~~L~l~~N~~~~~~~~~~~~---------------~~~p~-~l~~l~-~~~~~-l~~~~~~~ 198 (441)
.|+|+.+| ..|..+++|++|++++|.+.......... ..++. .+..+. .+..+ +.+|.+..
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 89999986 77899999999999999986554322110 01111 122222 12223 56677777
Q ss_pred CCchhhhhhhhccccccc-ccCCCCCCCchh
Q psy2947 199 QPSRLQDLAVQSVIASKE-NFFEPGLFPGPL 228 (441)
Q Consensus 199 ~p~~l~~l~~l~~l~l~~-n~~~~~~~p~~~ 228 (441)
+|........+..+.+.. |.+. .+|...
T Consensus 169 i~~~~f~~~~L~~l~l~~~n~l~--~i~~~~ 197 (350)
T 4ay9_X 169 IHNSAFNGTQLDELNLSDNNNLE--ELPNDV 197 (350)
T ss_dssp ECTTSSTTEEEEEEECTTCTTCC--CCCTTT
T ss_pred CChhhccccchhHHhhccCCccc--CCCHHH
Confidence 777666666777777764 4333 366543
No 370
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=99.11 E-value=3.8e-10 Score=85.05 Aligned_cols=79 Identities=20% Similarity=0.260 Sum_probs=66.4
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 319 FLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 319 f~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
|..++..........++++.+|+.+|.|++|.|+.+||..++... ......++++.+|+.+|.+++|.|+++||..++.
T Consensus 14 ~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 14 ENLYFQSLMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 92 (94)
T ss_dssp CTHHHHHHHCCCSCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH-TCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 334444444455678899999999999999999999999999887 3445678999999999999999999999999875
No 371
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=99.11 E-value=2.1e-10 Score=89.26 Aligned_cols=61 Identities=18% Similarity=0.351 Sum_probs=49.8
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q psy2947 371 KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIA 433 (441)
Q Consensus 371 ~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l 433 (441)
++++.+|+.+|+|++|+|+.+|++.+++ +..+++++++.+++.+|.|+||.|+|+||+.+|
T Consensus 14 ~~l~~~F~~~D~d~dG~I~~~El~~~l~--~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~ 74 (111)
T 2kgr_A 14 LKYRQLFNSHDKTMSGHLTGPQARTILM--QSSLPQAQLASIWNLSDIDQDGKLTAEEFILAM 74 (111)
T ss_dssp HHHHHHHHTTSCSSCCEEEHHHHHHHHH--TTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHH--hCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHH
Confidence 4667788888888888888888888887 455788888888888888888888888888776
No 372
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=99.10 E-value=2.3e-10 Score=94.09 Aligned_cols=85 Identities=5% Similarity=0.056 Sum_probs=48.6
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHH
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQI 412 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l 412 (441)
.++++.+|+.||.|++|.|+.+||..++... +.....++++.+|+.+|.+++|.|+++||..++... .+++..+
T Consensus 47 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~-g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~~~~a 120 (147)
T 1wy9_A 47 LEAFKVKYMEFDLNGNGDIDIMSLKRMLEKL-GVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK-----RSAILRM 120 (147)
T ss_dssp HHHHHHHHTTSCCCTTSSEEHHHHHHHHHHT-TCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS-----GGGGGGG
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh-----HHHHHHH
Confidence 3456666666666666666666666666554 223345566666666666666666666666666432 3445556
Q ss_pred HHHhCCCCCCc
Q psy2947 413 FREANVTMNSK 423 (441)
Q Consensus 413 ~~~~d~d~dg~ 423 (441)
|+.+|.+++|.
T Consensus 121 F~~~D~d~~g~ 131 (147)
T 1wy9_A 121 ILMYEEKNKEH 131 (147)
T ss_dssp GGGCCCC----
T ss_pred HHHHccCCCCC
Confidence 66666666654
No 373
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=99.08 E-value=6e-11 Score=91.97 Aligned_cols=62 Identities=15% Similarity=0.229 Sum_probs=49.9
Q ss_pred hHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q psy2947 370 PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIA 433 (441)
Q Consensus 370 ~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l 433 (441)
.++++.+|+.+|+|++|+|+.+|++.+++..| +++++++.+++.+|.|++|.|+|+||+.+|
T Consensus 21 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g--l~~~el~~i~~~~D~d~dG~I~~~EF~~~m 82 (110)
T 1iq3_A 21 REYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSDADCDGALTLPEFCAAF 82 (110)
T ss_dssp HHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHH
Confidence 45677888888888888888888888887765 667778888888888888888888888776
No 374
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=99.08 E-value=1.5e-10 Score=87.12 Aligned_cols=65 Identities=22% Similarity=0.392 Sum_probs=57.3
Q ss_pred HHHHHHHHHhC-CCCCC-cccHHHHHHHHHH-----hCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 371 KEVVDAFKAAD-TTKSG-TVPAKYLKHVLVN-----WGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 371 ~~~~~~f~~~D-~~~~G-~is~~ef~~~l~~-----~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+.++.+|+.+| .+++| .|+.+||+.+++. +|..+++++++.+++.+|.|++|.|+|+||+.++.+
T Consensus 9 ~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 80 (93)
T 1k2h_A 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (93)
T ss_dssp HHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 56788899999 79999 9999999999987 888889999999999999999999999999988754
No 375
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.07 E-value=1.4e-10 Score=119.97 Aligned_cols=126 Identities=10% Similarity=0.160 Sum_probs=89.7
Q ss_pred chHHHHHhhh--ccccC--CCccCHHHHHHHHHHcCCCcCHHHHHHHHH-----------hCCCcccHHHHHHHHHhhcC
Q psy2947 264 PYLEFRECFF--LFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLA-----------EKGGKLSFPDFLKVMHTHSK 328 (441)
Q Consensus 264 ~~~~l~~~f~--~~d~~--G~i~~~~el~~~~~~~~~~~~~~~~~~~~~-----------~~~g~i~~~ef~~~~~~~~~ 328 (441)
....+++.|. .+|.+ |.| +..|+..+++. ...++.+++. +++|.|+|+||..++....
T Consensus 144 ~~~~Lk~~F~~~~fD~d~dG~I-s~~EL~~~l~~-----~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~- 216 (799)
T 2zkm_X 144 RSTFLDKILVKLKMQLNSEGKI-PVKNFFQMFPA-----DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC- 216 (799)
T ss_dssp HHHHHHHHHHHHHHSCCTTSCE-EHHHHHHHSCS-----CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS-
T ss_pred HHHHHHHHhHHhccCCCCCCeE-CHHHHHHHHhh-----hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHcc-
Confidence 4567888888 67865 888 78999888765 2566776664 3568999999999998764
Q ss_pred CCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCC---------CChHHHHHHHHHhCCC----CCCcccHHHHHH
Q psy2947 329 AEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAE---------DIPKEVVDAFKAADTT----KSGTVPAKYLKH 395 (441)
Q Consensus 329 ~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~---------~~~~~~~~~f~~~D~~----~~G~is~~ef~~ 395 (441)
..++++++|+.||.+++|.|+.+||++++...++.. ..+++++++++.+|.| ++|.|+++||.+
T Consensus 217 ---~r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF~~ 293 (799)
T 2zkm_X 217 ---PRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVW 293 (799)
T ss_dssp ---CCHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHH
T ss_pred ---CHHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchhhhhh
Confidence 357899999999999999999999999999875443 4567899999999999 899999999999
Q ss_pred HHHH
Q psy2947 396 VLVN 399 (441)
Q Consensus 396 ~l~~ 399 (441)
+|..
T Consensus 294 ~L~S 297 (799)
T 2zkm_X 294 FLCG 297 (799)
T ss_dssp HHHS
T ss_pred cccC
Confidence 9975
No 376
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=99.07 E-value=1.6e-10 Score=95.37 Aligned_cols=93 Identities=13% Similarity=0.241 Sum_probs=76.2
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHH
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQI 412 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l 412 (441)
..++..+++.+|.+++ +.+|..+ . ...+.++.+|+.+|.|++|.|+.+||+.+++.+|..+++++++.+
T Consensus 23 ~~~~~~i~~~~d~~~~----~~~~~~l-~------~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l 91 (150)
T 2jjz_A 23 ERRLAEINREFLCDQK----YSDEENL-P------EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKM 91 (150)
T ss_dssp HHHHHHHHHHHHTCGG----GSSCTTH-H------HHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHhccCCC----chhhHhH-H------HHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHH
Confidence 4567778888887764 2222222 1 114678899999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCceeHHHHHHHHhcc
Q psy2947 413 FREANVTMNSKVRYEDFVKIACAP 436 (441)
Q Consensus 413 ~~~~d~d~dg~i~~~ef~~~l~~~ 436 (441)
++.+|.|++|.|+|+||+.++...
T Consensus 92 ~~~~D~d~dg~I~~~eF~~~~~~~ 115 (150)
T 2jjz_A 92 ISEVTGGVSDTISYRDFVNMMLGK 115 (150)
T ss_dssp HHHHHTTSCSSBCHHHHHHHHHSS
T ss_pred HHHHCCCCCCcEeHHHHHHHHHHh
Confidence 999999999999999999998754
No 377
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=99.07 E-value=1.5e-10 Score=88.85 Aligned_cols=65 Identities=12% Similarity=0.284 Sum_probs=47.8
Q ss_pred HHHHHHHHHhC-CCCC-CcccHHHHHHHHHH-hCCCCC-HHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 371 KEVVDAFKAAD-TTKS-GTVPAKYLKHVLVN-WGEGLS-SKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 371 ~~~~~~f~~~D-~~~~-G~is~~ef~~~l~~-~~~~l~-~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
++++.+|+.|| .|++ |+|+.+||+.+++. +|...+ +++++.+++.+|.|+||.|+|+||+.+|..
T Consensus 22 ~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~ 90 (106)
T 2h2k_A 22 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE 90 (106)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 45677788888 6775 68888888888875 554443 367788888888888888888888877653
No 378
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=99.07 E-value=2.8e-10 Score=87.36 Aligned_cols=60 Identities=13% Similarity=0.252 Sum_probs=52.8
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q psy2947 371 KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIA 433 (441)
Q Consensus 371 ~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l 433 (441)
++++.+|+.+|+ ++|+|+.+|++.+|+..| ++++++..+++.+|.|+||.|+|+||+.+|
T Consensus 15 ~~~~~~F~~~D~-~dG~Is~~el~~~l~~~g--l~~~el~~i~~~~D~d~dG~id~~EF~~~m 74 (106)
T 1eh2_A 15 AKYDAIFDSLSP-VNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGMLDRDEFAVAM 74 (106)
T ss_dssp HHHHHHHTTSCC-SSSCCBHHHHHHHHHTTT--CCHHHHHHHHHHHCSSCSSBCCHHHHHHHH
T ss_pred HHHHHHHHHhCC-CCCeEcHHHHHHHHHHcC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHH
Confidence 467788999999 999999999999998876 788889999999999999999999998877
No 379
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=99.06 E-value=1.8e-10 Score=86.50 Aligned_cols=64 Identities=16% Similarity=0.349 Sum_probs=51.6
Q ss_pred HHHHHHHHHhC-CCCCC-cccHHHHHHHHHHh---CCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 371 KEVVDAFKAAD-TTKSG-TVPAKYLKHVLVNW---GEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 371 ~~~~~~f~~~D-~~~~G-~is~~ef~~~l~~~---~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+.++.+|+.+| +|++| .|+.+||+.+++.. +. +++++++.+++.+|.|++|.|+|+||+.++..
T Consensus 10 ~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~-~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~ 78 (92)
T 2kax_A 10 TTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGE-MKESSIDDLMKSLDKNSDQEIDFKEYSVFLTM 78 (92)
T ss_dssp HHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTT-TCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCC-CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 46777888888 88888 88888888888863 23 67778888888888888888888888887753
No 380
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=99.06 E-value=8.3e-11 Score=87.31 Aligned_cols=85 Identities=26% Similarity=0.323 Sum_probs=67.7
Q ss_pred hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcc
Q psy2947 309 EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTV 388 (441)
Q Consensus 309 ~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~i 388 (441)
+++|.|+++| .++..... ......++.+|+.+|.|++|.|+.+||..++... ......++++.+|+.+|.+++|.|
T Consensus 1 ~~~G~i~~~e--~~~~~~l~-~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-~~~~~~~~~~~l~~~~d~~~~g~i 76 (87)
T 1s6j_A 1 HSSGHIDDDD--KHMAERLS-EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRV-GSELMESEIKDLMDAADIDKSGTI 76 (87)
T ss_dssp CCSSSSSSHH--HHSSSSSC-SSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTT-TSSCCHHHHHHHHHHHCTTCSSEE
T ss_pred CCCCccCccH--HHHHHHCC-HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcC
Confidence 3688999999 23322222 2234568999999999999999999999999877 344557889999999999999999
Q ss_pred cHHHHHHHH
Q psy2947 389 PAKYLKHVL 397 (441)
Q Consensus 389 s~~ef~~~l 397 (441)
+++||..++
T Consensus 77 ~~~eF~~~~ 85 (87)
T 1s6j_A 77 DYGEFIAAT 85 (87)
T ss_dssp CHHHHTTCC
T ss_pred cHHHHHHHH
Confidence 999997654
No 381
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=99.05 E-value=1.2e-10 Score=84.38 Aligned_cols=66 Identities=18% Similarity=0.362 Sum_probs=54.8
Q ss_pred hHHHHHHHHHhCC-CCCC-cccHHHHHHHHHH-hCCCC-CHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 370 PKEVVDAFKAADT-TKSG-TVPAKYLKHVLVN-WGEGL-SSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 370 ~~~~~~~f~~~D~-~~~G-~is~~ef~~~l~~-~~~~l-~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.+.++.+|+.+|. +++| .|+.+||+.+++. +|..+ ++++++.+++.+|.|++|.|+|+||+.++.+
T Consensus 6 ~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 75 (78)
T 1cb1_A 6 PAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKK 75 (78)
T ss_dssp HHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 4677888888888 8888 8999999888875 77666 7778888888888888899999999887754
No 382
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=99.05 E-value=4.7e-10 Score=89.88 Aligned_cols=61 Identities=16% Similarity=0.237 Sum_probs=55.1
Q ss_pred hHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q psy2947 370 PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIA 433 (441)
Q Consensus 370 ~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l 433 (441)
.++++.+|+.|| +++|+|+.+|++.+|+..+ +++++++.|++.+|.|+||.|+|+||+.+|
T Consensus 50 ~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~g--l~~~el~~I~~~~D~d~dG~Ld~~EF~~am 110 (139)
T 2jq6_A 50 KPTYDEIFYTLS-PVNGKITGANAKKEMVKSK--LPNTVLGKIWKLADVDKDGLLDDEEFALAN 110 (139)
T ss_dssp HHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTT--CCHHHHHHHHHHHCSSCCSEEEHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCeECHHHHHHHHHHhC--cCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 467888999999 9999999999999999877 788999999999999999999999999887
No 383
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.04 E-value=2.7e-10 Score=117.32 Aligned_cols=121 Identities=12% Similarity=0.206 Sum_probs=100.3
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhh-------cCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHh
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAA-------DTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAA 380 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~-------D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~ 380 (441)
.+++|.|+++|+..++.... ....++..+++.. |.+++|.|+++||.+++..+.. +++++++|+.+
T Consensus 166 ~n~dG~Is~kEl~~~l~~~~---~~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~~----R~EI~eiF~~y 238 (816)
T 3qr0_A 166 EMEKNKIPVKAIQKCLSKDK---DDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALLE----RSEIEGIFKEL 238 (816)
T ss_dssp SCCSSEEEHHHHHHHHCSCH---HHHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHCC----CTHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHhcC---ChHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcCC----HHHHHHHHHHH
Confidence 57899999999998876321 1134577777776 6788999999999999998732 45899999999
Q ss_pred CCCCCCcccHHHHHHHHHHhC-CC---------CCHHHHHHHHHHhCC--C----CCCceeHHHHHHHHhcc
Q psy2947 381 DTTKSGTVPAKYLKHVLVNWG-EG---------LSSKEVDQIFREANV--T----MNSKVRYEDFVKIACAP 436 (441)
Q Consensus 381 D~~~~G~is~~ef~~~l~~~~-~~---------l~~~~~~~l~~~~d~--d----~dg~i~~~ef~~~l~~~ 436 (441)
|.+++|.||. ||+++|+..+ .. ++.+++++|+++++. + ++|.|++++|.++|...
T Consensus 239 ~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~S~ 309 (816)
T 3qr0_A 239 SKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMCE 309 (816)
T ss_dssp TTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHHSG
T ss_pred ccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHhhcc
Confidence 9999999999 9999999986 43 689999999999876 4 68999999999999654
No 384
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.04 E-value=1.9e-11 Score=120.64 Aligned_cols=104 Identities=21% Similarity=0.157 Sum_probs=66.2
Q ss_pred CCcccEEeccCCCcC--------cccCCCCCCCEEEccCCCCCc-----CCcC-ccCCCCCcEEEccCCcCCCCC-----
Q psy2947 60 FSHAFLLSLSYTPIG--------RRIFKCDTVEVLSLKSNSLTS-----LPPD-IGRLTNLRVLCLTDNCLQNAS----- 120 (441)
Q Consensus 60 l~~L~~l~l~~n~i~--------~~~~~l~~L~~L~l~~n~l~~-----lp~~-~~~l~~L~~L~l~~n~l~~~~----- 120 (441)
.++|+.|++++|.+. ..+..+++|+.|++++|.++. +++. +..+++|++|++++|.++ .
T Consensus 198 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~--~~~~~~ 275 (461)
T 1z7x_W 198 PCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGIT--AKGCGD 275 (461)
T ss_dssp CCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC--HHHHHH
T ss_pred CCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCC--HHHHHH
Confidence 457788888877543 334556778888888877763 2222 335677778888877776 3
Q ss_pred CchhhhcCCCCCEEEccCCCCCcc-----chhhc-CCCCCCEEEccCCcCc
Q psy2947 121 IPFTLTFCKNLTHLYLDNNLLDAL-----PGFLL-SMPQLDTVYRHGNHNY 165 (441)
Q Consensus 121 ~p~~~~~l~~L~~L~l~~n~l~~l-----p~~~~-~l~~L~~L~l~~N~~~ 165 (441)
++..+..+++|++|++++|.++.. ...+. ..++|+.|++++|.+.
T Consensus 276 l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~ 326 (461)
T 1z7x_W 276 LCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFT 326 (461)
T ss_dssp HHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCB
T ss_pred HHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCc
Confidence 566666677777777777777532 22222 2256777777777653
No 385
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=99.02 E-value=1.8e-10 Score=94.79 Aligned_cols=66 Identities=18% Similarity=0.299 Sum_probs=61.3
Q ss_pred hHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 370 PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 370 ~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.++++.+|+.+|.|++|.|+.+||+.+++.+|..+++++++.+++.+|.|++|.|+|+||+.++..
T Consensus 47 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~ 112 (147)
T 1wy9_A 47 LEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLG 112 (147)
T ss_dssp HHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCS
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999998864
No 386
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=99.02 E-value=1e-09 Score=77.90 Aligned_cols=61 Identities=13% Similarity=0.281 Sum_probs=54.9
Q ss_pred CChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CC----CCCceeHHHHHHHHhcc
Q psy2947 368 DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREAN-VT----MNSKVRYEDFVKIACAP 436 (441)
Q Consensus 368 ~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d-~d----~dg~i~~~ef~~~l~~~ 436 (441)
...++++++|+.| ++++|+|+.+|+++ .+++++++.+++.+| .| ++|.|+|++|+++|...
T Consensus 7 ~~~eel~eAFr~f-~dg~G~It~~eLr~-------~lt~eevd~~i~~~d~~dg~~~~dG~idY~eF~~~m~~~ 72 (75)
T 1h8b_A 7 DTAEQVIASFRIL-ASDKPYILAEELRR-------ELPPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALYGE 72 (75)
T ss_dssp STHHHHHHHHHHH-TTSCSSBCHHHHHH-------HSCHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHH-hcCCCCcCHHHHHh-------cCCHHHHHHHHHhcCcccCCCCCCCcCcHHHHHHHHhcc
Confidence 3468899999999 99999999999999 389999999999999 56 58999999999998764
No 387
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=99.02 E-value=6.8e-10 Score=86.67 Aligned_cols=84 Identities=10% Similarity=0.155 Sum_probs=40.7
Q ss_pred HHHHHHHHhhcC-CCCC-cccHHHHHHHHH-hhccC--C--CChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCH
Q psy2947 334 KEVVDAFKAADT-TKSG-KLSFPDFLKVMH-THSKA--E--DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSS 406 (441)
Q Consensus 334 ~~~~~~f~~~D~-d~~g-~i~~~ef~~~~~-~~~~~--~--~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~ 406 (441)
+.++.+|+.||. |++| .|+.+||+.++. .+... . ...+.++.+|+.+|.|++|.|+++||..++.. + .
T Consensus 12 ~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~----~-~ 86 (113)
T 1xk4_C 12 ETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR----L-T 86 (113)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH----H-H
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH----H-H
Confidence 455666666663 6666 666666666665 33110 1 23455666666666666666666666666642 1 1
Q ss_pred HHHHHHHHHhCCCCCCc
Q psy2947 407 KEVDQIFREANVTMNSK 423 (441)
Q Consensus 407 ~~~~~l~~~~d~d~dg~ 423 (441)
..+...|...| +++|.
T Consensus 87 ~~~~~~f~~~~-~~~g~ 102 (113)
T 1xk4_C 87 WASHEKMHEGD-EGPGH 102 (113)
T ss_dssp HHHHC------------
T ss_pred HHHHHHHhhCC-CCCcc
Confidence 33344555555 55554
No 388
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=99.02 E-value=1.3e-10 Score=87.54 Aligned_cols=62 Identities=18% Similarity=0.337 Sum_probs=38.5
Q ss_pred HHHHHHHHhCC-CCCC-cccHHHHHHHH-HHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q psy2947 372 EVVDAFKAADT-TKSG-TVPAKYLKHVL-VNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIA 433 (441)
Q Consensus 372 ~~~~~f~~~D~-~~~G-~is~~ef~~~l-~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l 433 (441)
.++.+|+.+|. |++| .|+.+||+.++ +.+|..++.++++.+++.+|.|++|.|+|+||+.++
T Consensus 11 ~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~ 75 (93)
T 1xk4_A 11 SIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILV 75 (93)
T ss_dssp HHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHH
Confidence 45566666666 6666 66666666666 455544444555666666666666666666666655
No 389
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=99.02 E-value=5.7e-10 Score=78.07 Aligned_cols=64 Identities=22% Similarity=0.336 Sum_probs=57.2
Q ss_pred HHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 335 EVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 335 ~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
+++.+|+.+|.|++|.|+.+||..++... ......+++..+|+.+|.+++|.|+++||..++..
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~-~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAF-SPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHT-CTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 46789999999999999999999999876 34455788999999999999999999999999864
No 390
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=99.00 E-value=2.7e-10 Score=85.06 Aligned_cols=64 Identities=17% Similarity=0.339 Sum_probs=54.6
Q ss_pred HHHHHHHHHhC-CCCCC-cccHHHHHHHHHH---hCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 371 KEVVDAFKAAD-TTKSG-TVPAKYLKHVLVN---WGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 371 ~~~~~~f~~~D-~~~~G-~is~~ef~~~l~~---~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
+.++.+|+.+| ++++| .|+.+||+.+++. +|..+++++++.+++.+|.|++|.|+|+||+.++.
T Consensus 10 ~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 78 (90)
T 1k8u_A 10 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLG 78 (90)
T ss_dssp HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence 46778889999 59999 9999999999887 78778888888999999888899999999988774
No 391
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=98.99 E-value=4e-09 Score=78.97 Aligned_cols=68 Identities=24% Similarity=0.293 Sum_probs=60.5
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhC
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWG 401 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~ 401 (441)
.+.++.+|+.+|.|++|.|+.+||..++... ......+++..+|+.+|.+++|.|+++||..++....
T Consensus 8 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~ 75 (92)
T 2kn2_A 8 EEELKEAFKVFDKDQNGYISASELRHVMINL-GEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVR 75 (92)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-TCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhcc
Confidence 4678999999999999999999999999887 3445678899999999999999999999999998753
No 392
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=98.99 E-value=2.3e-09 Score=79.14 Aligned_cols=67 Identities=21% Similarity=0.203 Sum_probs=60.5
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhC
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWG 401 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~ 401 (441)
.+.++.+|+.+|.|++|.|+.+||..++.... ....+++..+|+.+|.+++|.|+++||..++....
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g--~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 76 (86)
T 2opo_A 10 IADRERIFKRFDTNGDGKISSSELGDALKTLG--SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANR 76 (86)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT--TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC--CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCc
Confidence 45688999999999999999999999998874 56678999999999999999999999999998753
No 393
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=98.98 E-value=1e-09 Score=83.25 Aligned_cols=67 Identities=15% Similarity=0.076 Sum_probs=58.3
Q ss_pred HHHHHHHHhhc-CCCC-CcccHHHHHHHHHh-h---ccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 334 KEVVDAFKAAD-TTKS-GKLSFPDFLKVMHT-H---SKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 334 ~~~~~~f~~~D-~d~~-g~i~~~ef~~~~~~-~---~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
+.++++|+.|| .||+ |+|+.+|++.++.. + .+.....++++.+|+.+|.|+||.|+++||..++..+
T Consensus 10 ~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~ 82 (101)
T 3nso_A 10 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 82 (101)
T ss_dssp HHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 57889999998 8987 99999999999985 3 1345567899999999999999999999999998763
No 394
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=98.98 E-value=3.8e-10 Score=85.27 Aligned_cols=63 Identities=14% Similarity=0.295 Sum_probs=38.0
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHH-----hCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 371 KEVVDAFKAADTTKSGTVPAKYLKHVLVN-----WGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 371 ~~~~~~f~~~D~~~~G~is~~ef~~~l~~-----~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
+.++.+|+.||. ++|+|+.+||+.+++. +|..+++++++.+++.+|.|+||.|+|+||+.+|.
T Consensus 9 ~~l~~~F~~fD~-~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~ 76 (96)
T 1a4p_A 9 ETMMFTFHKFAG-DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIA 76 (96)
T ss_dssp HHHHHHHHHHHG-GGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHcC-CCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 345566666662 4456666666666654 34445566666666666666666666666666554
No 395
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=98.98 E-value=1.3e-09 Score=78.83 Aligned_cols=65 Identities=20% Similarity=0.244 Sum_probs=59.3
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
++++.+|+.+|.|++|.|+.+||..++.... ....+++..+|+.+|.+++|.|+++||..++...
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g--~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~ 67 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTDALRTLG--STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH--TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC--CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence 4688999999999999999999999998874 5667899999999999999999999999999764
No 396
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Probab=98.97 E-value=2.3e-10 Score=87.19 Aligned_cols=62 Identities=10% Similarity=0.281 Sum_probs=37.0
Q ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHHH-----hCC--CCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 372 EVVDAFKAADTTKSGTVPAKYLKHVLVN-----WGE--GLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 372 ~~~~~f~~~D~~~~G~is~~ef~~~l~~-----~~~--~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
+++.+|+.||.+ +|+|+.+||+.+++. +|. .+++++++.+++.+|.|+||.|+|+||+.+|.
T Consensus 11 ~l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~ 79 (100)
T 1psr_A 11 GMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLG 79 (100)
T ss_dssp HHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 455566666644 566666666666654 232 34555566666666666666666666666553
No 397
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=98.96 E-value=1.8e-09 Score=84.21 Aligned_cols=65 Identities=11% Similarity=0.303 Sum_probs=57.4
Q ss_pred HHHHHHHHHhCC-CCCC-cccHHHHHHHHH-HhCCC-----CCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 371 KEVVDAFKAADT-TKSG-TVPAKYLKHVLV-NWGEG-----LSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 371 ~~~~~~f~~~D~-~~~G-~is~~ef~~~l~-~~~~~-----l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
+.++.+|+.||. |++| +|+.+||+.+|+ .+|.. +++++++.+|+.+|.|+||.|+|+||+.++.+
T Consensus 12 ~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 84 (113)
T 1xk4_C 12 ETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR 84 (113)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 357789999994 9999 999999999999 67742 67899999999999999999999999998854
No 398
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=98.95 E-value=2.8e-09 Score=80.59 Aligned_cols=67 Identities=13% Similarity=0.093 Sum_probs=57.4
Q ss_pred HHHHHHHHhhc-CCCCC-cccHHHHHHHHHh-hc---cCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 334 KEVVDAFKAAD-TTKSG-KLSFPDFLKVMHT-HS---KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 334 ~~~~~~f~~~D-~d~~g-~i~~~ef~~~~~~-~~---~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
++++++|+.|| .||+| +|+.+|+++++.. +. ......++++.+|+.+|.|+||.|+++||..++..+
T Consensus 11 ~~l~~~F~~fd~~dgdgG~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 83 (98)
T 3n22_A 11 AVLVTTFHKYSSQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLALI 83 (98)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHCHHHHCSSCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 56889999998 88985 9999999999985 21 234567899999999999999999999999998764
No 399
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=98.93 E-value=2.3e-09 Score=77.25 Aligned_cols=66 Identities=17% Similarity=0.316 Sum_probs=58.6
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
.+.++.+|+.+|.|++|.|+.+||..++... +.....+++..+|+.+|.+++|.|+++||..++..
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 6 KQEIKEAFDLFDTNKTGSIDYHELKVAMRAL-GFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE 71 (77)
T ss_dssp HHHHHHHHHHHCCSSSSEEEHHHHHHHHHHH-TCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHh-CCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 3568899999999999999999999999887 34455788999999999999999999999999865
No 400
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=98.93 E-value=4e-10 Score=96.50 Aligned_cols=90 Identities=13% Similarity=0.207 Sum_probs=69.1
Q ss_pred HhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHH--HhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCC
Q psy2947 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAF--KAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKS 385 (441)
Q Consensus 308 ~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f--~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~ 385 (441)
.+++|.|+++| .++..........+++...| +.||.|++|.|+++||..++... +.....+++..+|+.+|.|++
T Consensus 76 ~d~dg~I~~~E--~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~-g~~~~~~~~~~~~~~~D~d~d 152 (186)
T 2hps_A 76 ISVEEAAVNAT--DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAV-GPDLTDDKAITCFNTLDFNKN 152 (186)
T ss_dssp EEHHHHHHHHH--HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH-CTTCCHHHHHHHHHHHCTTCS
T ss_pred CCCCCcccHHH--HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHh-CCCCCHHHHHHHHHHHcCCCC
Confidence 45678888888 44443322111123445555 78899999999999999999887 344567899999999999999
Q ss_pred CcccHHHHHHHHHHh
Q psy2947 386 GTVPAKYLKHVLVNW 400 (441)
Q Consensus 386 G~is~~ef~~~l~~~ 400 (441)
|.|+++||.+++...
T Consensus 153 G~i~~~ef~~~~~~~ 167 (186)
T 2hps_A 153 GQISRDEFLVTVNDF 167 (186)
T ss_dssp SEEEHHHHHHHHHHH
T ss_pred CcCcHHHHHHHHHHH
Confidence 999999999999874
No 401
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=98.93 E-value=3.5e-09 Score=79.23 Aligned_cols=68 Identities=10% Similarity=0.052 Sum_probs=56.4
Q ss_pred HHHHHHHHHhhc-CCCC-CcccHHHHHHHHHh-hc---cCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 333 PKEVVDAFKAAD-TTKS-GKLSFPDFLKVMHT-HS---KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 333 ~~~~~~~f~~~D-~d~~-g~i~~~ef~~~~~~-~~---~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
.+.++++|+.|| .||+ |+|+.+|+++++.. +. ......++++.+++.+|.|+||.|+++||..++..+
T Consensus 9 ~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 82 (93)
T 4eto_A 9 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 82 (93)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 357889999998 6885 89999999999985 32 223457889999999999999999999999999764
No 402
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=98.93 E-value=5e-10 Score=78.15 Aligned_cols=62 Identities=16% Similarity=0.223 Sum_probs=53.8
Q ss_pred HHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 337 VDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 337 ~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
+.+|+.+|.|++|.|+.+||..++.... .....++++.+|+.+|.+++|.|+++||..++..
T Consensus 3 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 3 EALFKEIDVNGDGAVSYEEVKAFVSKKR-AIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp CHHHHHHCTTCSSSCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred HHHHHHHCCCCCCcccHHHHHHHHHHcc-CCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 5789999999999999999999998762 2333568899999999999999999999999854
No 403
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=98.93 E-value=4.1e-09 Score=80.44 Aligned_cols=67 Identities=10% Similarity=0.077 Sum_probs=57.1
Q ss_pred HHHHHHHHhhc-CCCC-CcccHHHHHHHHHh-hc---cCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 334 KEVVDAFKAAD-TTKS-GKLSFPDFLKVMHT-HS---KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 334 ~~~~~~f~~~D-~d~~-g~i~~~ef~~~~~~-~~---~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
++++++|+.|| .|++ |+|+.+||+.++.. +. ......++++.+|+.+|.|+||.|+++||..++..+
T Consensus 13 ~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~ 85 (104)
T 3zwh_A 13 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSI 85 (104)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 57889999998 7785 89999999999985 32 233457899999999999999999999999999764
No 404
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=98.93 E-value=1.5e-09 Score=76.96 Aligned_cols=67 Identities=18% Similarity=0.237 Sum_probs=59.5
Q ss_pred CCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 331 DIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 331 ~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
...+.++.+|+.+|.|++|.|+.+||..++... ......++++.+|+.+|.+++|.|+++||..++.
T Consensus 3 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 69 (71)
T 2b1u_A 3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGL-GQPLPQEELDAMIREADVDQDGRVNYEEFARMLA 69 (71)
T ss_dssp TTHHHHHHHHTTSCCSSSSEEEHHHHHHHGGGT-TCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred ccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 356789999999999999999999999999876 3445678899999999999999999999999874
No 405
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=98.92 E-value=2.5e-09 Score=82.05 Aligned_cols=64 Identities=11% Similarity=0.236 Sum_probs=50.7
Q ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHHH-----hCCCCCH-----------HHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 372 EVVDAFKAADTTKSGTVPAKYLKHVLVN-----WGEGLSS-----------KEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 372 ~~~~~f~~~D~~~~G~is~~ef~~~l~~-----~~~~l~~-----------~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.++.+|+.+|.|++|+|+.+||+.++.. .|...+. ..+..+|+.+|.|+||.|+++||+.++.+
T Consensus 21 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 100 (103)
T 1snl_A 21 NPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQR 100 (103)
T ss_dssp CHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHC
T ss_pred CHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHhc
Confidence 4677888888888888888888888876 3543332 34788999999999999999999988865
No 406
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=98.92 E-value=6.6e-10 Score=118.17 Aligned_cols=120 Identities=12% Similarity=0.144 Sum_probs=97.7
Q ss_pred cccHHHHHHHHHhhcCC-----------CC---CHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHH
Q psy2947 313 KLSFPDFLKVMHTHSKA-----------ED---IPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFK 378 (441)
Q Consensus 313 ~i~~~ef~~~~~~~~~~-----------~~---~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~ 378 (441)
.+.+++|...+...... .. ....+..+|+.||.|++|.|+.+||..++.... .....+.+..+|.
T Consensus 690 ~i~~~eF~~~~~~~~~~~e~~~l~~~~~~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g-~~~~~~~~~~~~~ 768 (863)
T 1sjj_A 690 RVGWEQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMG-YNMGEAEFARIMS 768 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHHHT-CCCCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhhccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCCHHHHHHHHH
Confidence 57788887766543211 11 235689999999999999999999999998873 3455788999999
Q ss_pred HhCCCCCCcccHHHHHHHHHHhC-CCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 379 AADTTKSGTVPAKYLKHVLVNWG-EGLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 379 ~~D~~~~G~is~~ef~~~l~~~~-~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
.+|.|++|.|+++||..++.... ...+.+.+..+|+.+ .|++|.|+.+||..++.
T Consensus 769 ~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~l~~aF~~~-~d~~G~Is~~El~~~l~ 824 (863)
T 1sjj_A 769 IVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFKIL-AGDKNYITVDELRRELP 824 (863)
T ss_dssp HHCTTSCSEEETTHHHHTHHHHSTTCSSSHHHHHHHHGG-GTSSSEEEHHHHHHHSC
T ss_pred HhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHH-hCCCCcCcHHHHHHHCC
Confidence 99999999999999999998753 234567899999999 89999999999998763
No 407
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=98.92 E-value=4.3e-09 Score=77.49 Aligned_cols=66 Identities=20% Similarity=0.331 Sum_probs=59.2
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
..++.+|+.+|.|++|.|+.+||..++... +.....+++..+|+.+|.+++|.|+++||..++...
T Consensus 14 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~ 79 (85)
T 2ktg_A 14 QEYKEAFQLFDKDNDNKLTAEELGTVMRAL-GANPTKQKISEIVKDYDKDNSGKFDQETFLTIMLEY 79 (85)
T ss_dssp HHHHHHHHHTCTTCCSEEEHHHHHHHHHTT-SSCCCHHHHHHHHHHHSSSSCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 568899999999999999999999999877 445567889999999999999999999999999764
No 408
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=98.91 E-value=3.7e-09 Score=81.32 Aligned_cols=85 Identities=12% Similarity=0.108 Sum_probs=68.8
Q ss_pred cccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHH
Q psy2947 313 KLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKY 392 (441)
Q Consensus 313 ~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~e 392 (441)
.++++++...+..... .....++.+|+.||.|++|.|+.+||..++... ......++++.+|..+|.+++|.|+++|
T Consensus 5 ~~~~~~~~~~l~~~~~--~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~e~~~l~~~~d~~~~g~i~~~e 81 (105)
T 1wlz_A 5 ATADRDILARLHKAVT--SHYHAITQEFENFDTMKTNTISREEFRAICNRR-VQILTDEQFDRLWNEMPVNAKGRLKYPD 81 (105)
T ss_dssp TTCCHHHHHHHHHHHH--HTHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-TCCCCHHHHHHHHTTSCBCTTSCBCHHH
T ss_pred chhHHHHHHHHHHHHH--chHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHcCCCCCCCCcHHH
Confidence 4556666666654432 245789999999999999999999999999887 3445678999999999999999999999
Q ss_pred HHHHHHHh
Q psy2947 393 LKHVLVNW 400 (441)
Q Consensus 393 f~~~l~~~ 400 (441)
|..++...
T Consensus 82 F~~~~~~~ 89 (105)
T 1wlz_A 82 FLSRFSSE 89 (105)
T ss_dssp HHHHHC--
T ss_pred HHHHHhcc
Confidence 99999753
No 409
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=98.91 E-value=5.6e-09 Score=77.85 Aligned_cols=66 Identities=21% Similarity=0.243 Sum_probs=59.0
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
...++.+|+.+|.|++|.|+.+||..++... +.....+++..+|+.+|.+++|.|+++||..++..
T Consensus 19 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~ 84 (90)
T 1avs_A 19 IAEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84 (90)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-TCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 3568899999999999999999999999887 34556788999999999999999999999999875
No 410
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=98.91 E-value=4e-09 Score=78.86 Aligned_cols=64 Identities=17% Similarity=0.321 Sum_probs=57.6
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
.+.++.+|+.+|.|++|.|+.+||..++.... ...++++.+|+.+|.+++|.|+++||..++..
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~ 89 (91)
T 2pmy_A 26 LARLRSVFAACDANRSGRLEREEFRALCTELR---VRPADAEAVFQRLDADRDGAITFQEFARGFLG 89 (91)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT---CCHHHHHHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC---cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 35688999999999999999999999998773 45788999999999999999999999999875
No 411
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=98.91 E-value=6.1e-09 Score=92.36 Aligned_cols=89 Identities=12% Similarity=0.148 Sum_probs=74.4
Q ss_pred HHhCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhc------------cCCCChHHHH
Q psy2947 307 LAEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHS------------KAEDIPKEVV 374 (441)
Q Consensus 307 ~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~------------~~~~~~~~~~ 374 (441)
+.+++|.|++.||..++.... ....+++++.+|+.|| |++|.|+++|+..+++... .....++.++
T Consensus 142 D~~~~G~I~f~ef~~aLs~l~-rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~ 219 (261)
T 1eg3_A 142 DTGRTGRIRVLSFKTGIISLC-KAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVR 219 (261)
T ss_dssp CTTCCSEEEHHHHHHHHHHTS-SSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHH
T ss_pred cCCCCceEeHHHHHHHHHHHc-CCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHH
Confidence 357899999999999998764 4566789999999999 9999999999999885521 1223467889
Q ss_pred HHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 375 DAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 375 ~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
.+|+.+| +||.|+.+||...++.
T Consensus 220 ~~F~~~d--~dg~It~~EFl~~~~~ 242 (261)
T 1eg3_A 220 SCFQFAN--NKPEIEAALFLDWMRL 242 (261)
T ss_dssp HHHHHTT--TCSCBCHHHHHHHHHT
T ss_pred HHHHhCC--CCCcCCHHHHHHHHHh
Confidence 9999996 8999999999999875
No 412
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.90 E-value=1.5e-10 Score=114.07 Aligned_cols=154 Identities=20% Similarity=0.148 Sum_probs=91.3
Q ss_pred CCcccEEeccCCCcCc----cc-CCCC----CCCEEEccCCCCC-----cCCcCccCCCCCcEEEccCCcCCCCCCchhh
Q psy2947 60 FSHAFLLSLSYTPIGR----RI-FKCD----TVEVLSLKSNSLT-----SLPPDIGRLTNLRVLCLTDNCLQNASIPFTL 125 (441)
Q Consensus 60 l~~L~~l~l~~n~i~~----~~-~~l~----~L~~L~l~~n~l~-----~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~ 125 (441)
+++|+.|++++|.+.. .+ ..++ +|++|+|++|.++ .+|..+..+++|++|++++|.++ ...+..+
T Consensus 55 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~-~~~~~~l 133 (461)
T 1z7x_W 55 NPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG-DAGLQLL 133 (461)
T ss_dssp CTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH-HHHHHHH
T ss_pred CCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCc-hHHHHHH
Confidence 5677888888876532 11 1233 5888888888877 35666777888888888888775 2222222
Q ss_pred h-----cCCCCCEEEccCCCCCc-----cchhhcCCCCCCEEEccCCcCccCccccccccccccccc-ccchhHHH-Hhh
Q psy2947 126 T-----FCKNLTHLYLDNNLLDA-----LPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIR-STSTRDEV-LRK 193 (441)
Q Consensus 126 ~-----~l~~L~~L~l~~n~l~~-----lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~-~l~~~~~~-l~~ 193 (441)
. ..++|++|++++|+++. ++..+..+++|+.|++++|.+..... ..+...+. ..+.+..+ +.+
T Consensus 134 ~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~-----~~l~~~l~~~~~~L~~L~L~~ 208 (461)
T 1z7x_W 134 CEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGV-----RVLCQGLKDSPCQLEALKLES 208 (461)
T ss_dssp HHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHH-----HHHHHHHHHSCCCCCEEECTT
T ss_pred HHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHH-----HHHHHHHhcCCCCceEEEccC
Confidence 2 24568888888887753 34556667788888888887522110 00111111 11122233 455
Q ss_pred ccccc-----CCchhhhhhhhcccccccccC
Q psy2947 194 QKKLH-----QPSRLQDLAVQSVIASKENFF 219 (441)
Q Consensus 194 ~~~~~-----~p~~l~~l~~l~~l~l~~n~~ 219 (441)
|.+.. ++..+..++.|+.|++++|.+
T Consensus 209 n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l 239 (461)
T 1z7x_W 209 CGVTSDNCRDLCGIVASKASLRELALGSNKL 239 (461)
T ss_dssp SCCBTTHHHHHHHHHHHCTTCCEEECCSSBC
T ss_pred CCCcHHHHHHHHHHHHhCCCccEEeccCCcC
Confidence 55543 455666777778887777754
No 413
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=98.90 E-value=7.1e-09 Score=78.64 Aligned_cols=69 Identities=12% Similarity=0.076 Sum_probs=57.8
Q ss_pred HHHHHHHHHhhcCCC---CCcccHHHHHHHHHhhccCCC----ChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhC
Q psy2947 333 PKEVVDAFKAADTTK---SGKLSFPDFLKVMHTHSKAED----IPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWG 401 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~---~g~i~~~ef~~~~~~~~~~~~----~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~ 401 (441)
.++++++|+.||.++ +|+|+.+|++.++........ ..++++.+|+.+|.|+||.|+++||..+|..+.
T Consensus 10 i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~ 85 (100)
T 3nxa_A 10 VIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGIT 85 (100)
T ss_dssp HHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 357899999999964 799999999999986533222 257899999999999999999999999998754
No 414
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=98.90 E-value=5.3e-09 Score=80.97 Aligned_cols=68 Identities=10% Similarity=0.071 Sum_probs=57.7
Q ss_pred HHHHHHHHHhhc-CCCCC-cccHHHHHHHHHhh----ccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 333 PKEVVDAFKAAD-TTKSG-KLSFPDFLKVMHTH----SKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 333 ~~~~~~~f~~~D-~d~~g-~i~~~ef~~~~~~~----~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
.++++.+|+.|| .|++| +|+.+||+.++... ......+++++.+|+.+|.|+||.|+++||..++...
T Consensus 21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~ 94 (113)
T 2lnk_A 21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 94 (113)
T ss_dssp HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence 357899999999 89997 99999999999752 1234456789999999999999999999999998753
No 415
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=98.89 E-value=1.5e-09 Score=82.60 Aligned_cols=62 Identities=5% Similarity=0.263 Sum_probs=33.7
Q ss_pred HHHHHHHHhC-CCCCC-cccHHHHHHHHHH-h----CCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q psy2947 372 EVVDAFKAAD-TTKSG-TVPAKYLKHVLVN-W----GEGLSSKEVDQIFREANVTMNSKVRYEDFVKIA 433 (441)
Q Consensus 372 ~~~~~f~~~D-~~~~G-~is~~ef~~~l~~-~----~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l 433 (441)
.++.+|+.+| .+++| .|+.+||+.+++. + |..+++++++.+++.+|.|++|.|+|+||+.++
T Consensus 14 ~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~ 82 (99)
T 1qls_A 14 SLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLI 82 (99)
T ss_dssp HHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 4445555554 55555 5555555555542 2 234455555555555555555555555555544
No 416
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=98.89 E-value=1.5e-09 Score=79.25 Aligned_cols=70 Identities=23% Similarity=0.303 Sum_probs=60.0
Q ss_pred CCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhC
Q psy2947 331 DIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWG 401 (441)
Q Consensus 331 ~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~ 401 (441)
...+.++ +|+.||.|++|.|+.+||..++..........+++..+|+.+|.+++|.|+++||..++....
T Consensus 6 ~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 75 (81)
T 1c7v_A 6 DEEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKSK 75 (81)
T ss_dssp -CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC-
T ss_pred cHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhh
Confidence 4567899 999999999999999999999987631445678999999999999999999999999997543
No 417
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=98.88 E-value=4.7e-09 Score=78.59 Aligned_cols=63 Identities=13% Similarity=0.094 Sum_probs=56.5
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
.+++++|+.+|.|++|+|+.+|++.++.... ...+++..+|+.+|.|++|.|+++||..+|..
T Consensus 9 ~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g---~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~ 71 (92)
T 1fi6_A 9 QYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK---LPILELSHIWELSDFDKDGALTLDEFCAAFHL 71 (92)
T ss_dssp HHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS---SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC---CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence 5678899999999999999999999998762 44678999999999999999999999999865
No 418
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=98.88 E-value=3.1e-09 Score=80.64 Aligned_cols=64 Identities=11% Similarity=0.074 Sum_probs=57.9
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
.++++++|+.+|.|++|+|+.+|++.++.... ...+++..+|+.+|.|++|.|+++||..+|..
T Consensus 10 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~---l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~ 73 (99)
T 1qjt_A 10 NPVYEKYYRQVEAGNTGRVLALDAAAFLKKSG---LPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73 (99)
T ss_dssp CTHHHHHHHHHCCTTSSCCCSHHHHHHHHTSS---SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcC---CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence 46789999999999999999999999998752 45788999999999999999999999999975
No 419
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=98.88 E-value=3.7e-09 Score=75.93 Aligned_cols=68 Identities=16% Similarity=0.182 Sum_probs=59.4
Q ss_pred CHHHHHHHHHhh-cCCCC-CcccHHHHHHHHHhhccCCC--ChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 332 IPKEVVDAFKAA-DTTKS-GKLSFPDFLKVMHTHSKAED--IPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 332 ~~~~~~~~f~~~-D~d~~-g~i~~~ef~~~~~~~~~~~~--~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
..+.++.+|+.+ |.|++ |.|+.+||..++.... ... ..++++.+|+.+|.+++|.|+++||..++..+
T Consensus 3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~ 74 (76)
T 1qx2_A 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLG-PSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHG-GGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhC-CCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 457889999999 99999 9999999999998773 233 45678999999999999999999999998764
No 420
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=98.88 E-value=3.8e-09 Score=79.61 Aligned_cols=64 Identities=11% Similarity=0.103 Sum_probs=57.1
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
.++++++|+.+|.|++|+|+.+|++.++.... ...++++.+|+.+|.|++|.|+++||..+|..
T Consensus 9 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g---~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~ 72 (95)
T 1c07_A 9 KAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG---LPSTLLAHIWSLCDTKDCGKLSKDQFALAFHL 72 (95)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT---CCHHHHHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC---CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence 46788999999999999999999999998762 44788999999999999999999999999864
No 421
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=98.87 E-value=5.8e-09 Score=80.97 Aligned_cols=64 Identities=16% Similarity=0.212 Sum_probs=56.7
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
.++++.+|+.||.|++|+|+.+|+..++.. .....+++..+|+.+|.|++|.|+++||..++..
T Consensus 13 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~---~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~ 76 (111)
T 2kgr_A 13 RLKYRQLFNSHDKTMSGHLTGPQARTILMQ---SSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHL 76 (111)
T ss_dssp HHHHHHHHHTTSCSSCCEEEHHHHHHHHHT---TCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHh---CCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 356888999999999999999999999983 3455788999999999999999999999999865
No 422
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=98.86 E-value=9.5e-09 Score=76.89 Aligned_cols=66 Identities=12% Similarity=0.201 Sum_probs=56.7
Q ss_pred HHHHHHHHhhcCCCCC---cccHHHHHHHHHhh----ccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 334 KEVVDAFKAADTTKSG---KLSFPDFLKVMHTH----SKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g---~i~~~ef~~~~~~~----~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
+.++.+|+.|| +++| +|+.+|++.++... .+.....+.++.+|+.+|.|+||.|+++||..++..+
T Consensus 9 ~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l 81 (92)
T 3rm1_A 9 VALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMI 81 (92)
T ss_dssp HHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 56889999999 7766 99999999999872 1345567899999999999999999999999998764
No 423
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=98.85 E-value=3.9e-09 Score=76.27 Aligned_cols=69 Identities=16% Similarity=0.228 Sum_probs=58.8
Q ss_pred CHHHHHHHHHhhcC-CCCC-cccHHHHHHHHHhhccCCC-ChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 332 IPKEVVDAFKAADT-TKSG-KLSFPDFLKVMHTHSKAED-IPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 332 ~~~~~~~~f~~~D~-d~~g-~i~~~ef~~~~~~~~~~~~-~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
..+.++.+|+.||. |++| .|+.+||..++........ ..+.++.+|+.+|.+++|.|+++||..++..+
T Consensus 5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 76 (78)
T 1cb1_A 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI 76 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHh
Confidence 46789999999999 9999 9999999999986323323 45678899999999999999999999998764
No 424
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=98.85 E-value=4.4e-09 Score=77.05 Aligned_cols=69 Identities=19% Similarity=0.232 Sum_probs=57.9
Q ss_pred CHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhcc-CCCChHHHHH----HHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 332 IPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSK-AEDIPKEVVD----AFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 332 ~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~-~~~~~~~~~~----~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
..+.++.+|+.+|.|++|.|+.+||..++..... .....+++.. +|+.+|.+++|.|+++||.+.+..+
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~~ 78 (83)
T 1yx7_A 5 VKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAEL 78 (83)
T ss_dssp SCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHHH
Confidence 4567899999999999999999999999987741 3334556667 9999999999999999999887654
No 425
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=98.83 E-value=1.2e-08 Score=77.33 Aligned_cols=68 Identities=13% Similarity=0.174 Sum_probs=57.8
Q ss_pred HHHHHHHHHhhc-CCCCC-cccHHHHHHHHHhhc----cCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 333 PKEVVDAFKAAD-TTKSG-KLSFPDFLKVMHTHS----KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 333 ~~~~~~~f~~~D-~d~~g-~i~~~ef~~~~~~~~----~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
.+.++.+|+.|| .|++| +|+.+||+.++.... ......++++.+|+.+|.|++|.|+++||..++...
T Consensus 9 ~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 82 (99)
T 2y5i_A 9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (99)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 356889999997 89988 999999999997531 234457889999999999999999999999998764
No 426
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=98.83 E-value=7.8e-09 Score=77.83 Aligned_cols=68 Identities=12% Similarity=0.104 Sum_probs=54.4
Q ss_pred HHHHHHHHHhhc-CCC-CCcccHHHHHHHHHhhc----cCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 333 PKEVVDAFKAAD-TTK-SGKLSFPDFLKVMHTHS----KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 333 ~~~~~~~f~~~D-~d~-~g~i~~~ef~~~~~~~~----~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
.++++.+|+.|| .|+ +|+|+.+||+.++.... +.....++++.+|+.+|.|++|.|+++||..++...
T Consensus 8 ~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 81 (95)
T 1j55_A 8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (95)
T ss_dssp HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 356889999999 798 58999999999997632 223345689999999999999999999999998753
No 427
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=98.82 E-value=7.1e-09 Score=77.61 Aligned_cols=67 Identities=16% Similarity=0.149 Sum_probs=57.5
Q ss_pred HHHHHHHHhhc-CCCCC-cccHHHHHHHHHhhcc-CCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 334 KEVVDAFKAAD-TTKSG-KLSFPDFLKVMHTHSK-AEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 334 ~~~~~~f~~~D-~d~~g-~i~~~ef~~~~~~~~~-~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
..++.+|+.|| .|++| .|+.+||+.++..... +......++.+|+.+|.|++|.|+++||..++...
T Consensus 10 ~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~~ 79 (92)
T 2kax_A 10 TTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYSVFLTML 79 (92)
T ss_dssp HHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 56889999999 99999 9999999999986422 11456789999999999999999999999999764
No 428
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.81 E-value=1.3e-10 Score=111.04 Aligned_cols=155 Identities=16% Similarity=0.026 Sum_probs=100.9
Q ss_pred CCcccEEeccCCCcCc--------ccC-CCCCCCEEEccCCCCCc--CCcCccCCCCCcEEEccCCcCCCCCCchhh---
Q psy2947 60 FSHAFLLSLSYTPIGR--------RIF-KCDTVEVLSLKSNSLTS--LPPDIGRLTNLRVLCLTDNCLQNASIPFTL--- 125 (441)
Q Consensus 60 l~~L~~l~l~~n~i~~--------~~~-~l~~L~~L~l~~n~l~~--lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~--- 125 (441)
+++|+.|+|++|.|.. .+. ..++|+.|+|++|.++. +..-...+.+|+.|+|++|.++ ..-...+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~-~~~~~~L~~~ 149 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLG-PEACKDLRDL 149 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCC-HHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCC-HHHHHHHHHH
Confidence 4678899999997652 122 23689999999998872 2222334568899999999886 2111222
Q ss_pred --hcCCCCCEEEccCCCCCc-----cchhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-Hhhcccc
Q psy2947 126 --TFCKNLTHLYLDNNLLDA-----LPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKL 197 (441)
Q Consensus 126 --~~l~~L~~L~l~~n~l~~-----lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~ 197 (441)
...++|++|+|++|.|+. ++..+..+++|++|+|++|.+..... ..+...+...+.+..+ +++|.++
T Consensus 150 L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~-----~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 150 LLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGL-----ELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp HHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHH-----HHHHHHGGGCSCCCEEECCSSCCC
T ss_pred HHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHH-----HHHHHHHhcCCCcCeEECCCCCCC
Confidence 235789999999998864 44566778889999999998633211 1223344444444444 5666654
Q ss_pred c-----CCchhhhhhhhcccccccccCC
Q psy2947 198 H-----QPSRLQDLAVQSVIASKENFFE 220 (441)
Q Consensus 198 ~-----~p~~l~~l~~l~~l~l~~n~~~ 220 (441)
. ++..+...+.|+.|++++|.+.
T Consensus 225 ~~g~~~l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 225 DTAALALARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HHHHHHHHHHHHHCSSCCEEECTTSSCC
T ss_pred HHHHHHHHHHHHhCCCCCEEeccCCCCC
Confidence 3 3345556688999999988754
No 429
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=98.81 E-value=7.8e-09 Score=79.23 Aligned_cols=67 Identities=12% Similarity=0.100 Sum_probs=55.7
Q ss_pred HHHHHHHHhhc-CCCC-CcccHHHHHHHHHhhccCCC-ChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 334 KEVVDAFKAAD-TTKS-GKLSFPDFLKVMHTHSKAED-IPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 334 ~~~~~~f~~~D-~d~~-g~i~~~ef~~~~~~~~~~~~-~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
++++.+|+.|| .|++ |+|+.+||..++........ ..+++..+|+.+|.|+||.|+++||..++...
T Consensus 22 ~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~ 91 (106)
T 2h2k_A 22 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL 91 (106)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 57899999999 7986 79999999999976323222 23578999999999999999999999998753
No 430
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=98.79 E-value=1.3e-08 Score=78.91 Aligned_cols=60 Identities=15% Similarity=0.244 Sum_probs=52.5
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q psy2947 371 KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIA 433 (441)
Q Consensus 371 ~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l 433 (441)
..++++|+.+|+ ++|+|+.+|++.+|...| ++.+++..|++..|.|+||.|+++||+.+|
T Consensus 33 ~~y~~iF~~lD~-~dG~Isg~elr~~~~~sg--Lp~~~L~~Iw~laD~d~dG~Ld~~EF~~aM 92 (121)
T 3fia_A 33 AKHDQQFHSLKP-ISGFITGDQARNFFFQSG--LPQPVLAQIWALADMNNDGRMDQVEFSIAM 92 (121)
T ss_dssp HHHHHHHHHTCC-BTTBEEHHHHHHHHGGGC--CCHHHHHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred HHHHHHHHHhCC-CCCeECHHHHHHHHHHcC--CCHHHHHHHHHHHcCCCCCcCCHHHHHHHH
Confidence 467788999998 899999999999998776 788899999999999999999999999877
No 431
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=98.79 E-value=5e-09 Score=81.08 Aligned_cols=65 Identities=11% Similarity=0.023 Sum_probs=57.2
Q ss_pred CHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 332 IPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 332 ~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
..++++++|+.||.|++|+|+.+|++.++.... ...+++..+|+.+|.|++|.|+++||..+|..
T Consensus 20 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g---l~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~ 84 (110)
T 1iq3_A 20 QREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK---LSIPELSYIWELSDADCDGALTLPEFCAAFHL 84 (110)
T ss_dssp SHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS---CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcC---CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 457899999999999999999999999887652 34567899999999999999999999999865
No 432
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=98.79 E-value=7.9e-09 Score=77.80 Aligned_cols=67 Identities=12% Similarity=0.121 Sum_probs=57.0
Q ss_pred HHHHHHHHHhhc-CCCCC-cccHHHHHHHHHhhc----cCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 333 PKEVVDAFKAAD-TTKSG-KLSFPDFLKVMHTHS----KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 333 ~~~~~~~f~~~D-~d~~g-~i~~~ef~~~~~~~~----~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
.++++.+|+.|| .|++| +|+.+||+.++.... +.....+.++.+|+.+|.|++|.|+++||..++..
T Consensus 11 ~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 83 (95)
T 2wcb_A 11 LEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 83 (95)
T ss_dssp HHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 356889999999 89998 999999999997521 23345678999999999999999999999999865
No 433
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=98.79 E-value=1.2e-08 Score=76.41 Aligned_cols=67 Identities=16% Similarity=0.219 Sum_probs=58.8
Q ss_pred HHHHHHHHHhhc-CCCCC-cccHHHHHHHHHh-----hccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 333 PKEVVDAFKAAD-TTKSG-KLSFPDFLKVMHT-----HSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 333 ~~~~~~~f~~~D-~d~~g-~i~~~ef~~~~~~-----~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
.+.++.+|+.|| .|++| .|+.+||..++.. . +.....++++.+|+.+|.+++|.|+++||..++...
T Consensus 8 ~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~-g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 81 (93)
T 1k2h_A 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFL-DVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (93)
T ss_dssp HHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHH-HCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 356889999999 79999 9999999999986 4 345567889999999999999999999999998764
No 434
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.78 E-value=2.9e-08 Score=102.86 Aligned_cols=125 Identities=7% Similarity=0.148 Sum_probs=101.6
Q ss_pred hHHHHHhhhc--ccc--CCCccCHHHHHHHHHHcCCCcCHHHHHHHHH----h-------CCCcccHHHHHHHHHhhcCC
Q psy2947 265 YLEFRECFFL--FAR--NGTIKTLDELSVIMRSLGMSPTIAELKKYLA----E-------KGGKLSFPDFLKVMHTHSKA 329 (441)
Q Consensus 265 ~~~l~~~f~~--~d~--~G~i~~~~el~~~~~~~~~~~~~~~~~~~~~----~-------~~g~i~~~ef~~~~~~~~~~ 329 (441)
...+++.|.. +|. +|.| +.+++..+++. ...++..+++ + ++|.|+++||.+++.....
T Consensus 149 ~~~L~kaf~~~~~D~n~dGkI-s~kel~~~l~~-----~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~- 221 (885)
T 3ohm_B 149 NTFLRKAYTKLKLQVNQDGRI-PVKNILKMFSA-----DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCL- 221 (885)
T ss_dssp HHHHHHHHHHHHHSCCTTSCE-EHHHHHHTTGG-----GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSC-
T ss_pred HHHHHHHHHHhcCccCCCCcc-CHHHHHHHHhc-----CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCC-
Confidence 3567777765 565 4888 78888887764 3456666664 1 5678999999999997743
Q ss_pred CCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCC---------CChHHHHHHHHHhCCC----CCCcccHHHHHHH
Q psy2947 330 EDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAE---------DIPKEVVDAFKAADTT----KSGTVPAKYLKHV 396 (441)
Q Consensus 330 ~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~---------~~~~~~~~~f~~~D~~----~~G~is~~ef~~~ 396 (441)
..+++++|+.||.+++|.|+.+||+.++...++.. ...+.+.++|+.+|.+ ++|.|++++|..+
T Consensus 222 ---R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~y 298 (885)
T 3ohm_B 222 ---RPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRY 298 (885)
T ss_dssp ---CHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHH
T ss_pred ---HHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhh
Confidence 47899999999999999999999999999886542 4568899999999999 7999999999999
Q ss_pred HHH
Q psy2947 397 LVN 399 (441)
Q Consensus 397 l~~ 399 (441)
|..
T Consensus 299 L~S 301 (885)
T 3ohm_B 299 LGG 301 (885)
T ss_dssp HTS
T ss_pred ccC
Confidence 975
No 435
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=98.78 E-value=2e-08 Score=74.05 Aligned_cols=65 Identities=11% Similarity=0.156 Sum_probs=57.8
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHH---HHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKE---VVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~---~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
..+++.+|+.||.|++|.|+.+||..++..+. .....++ +..+|..+|.+++|.|++ ||..++..
T Consensus 13 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g-~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~ 80 (86)
T 1j7q_A 13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLG-QTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK 80 (86)
T ss_dssp HHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTS-CCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHc-CCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence 46788999999999999999999999998873 4455677 999999999999999999 99999875
No 436
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=98.75 E-value=8.9e-09 Score=77.26 Aligned_cols=66 Identities=14% Similarity=0.122 Sum_probs=55.0
Q ss_pred HHHHHHHHhhcC-CCCC-cccHHHHHHHH-HhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 334 KEVVDAFKAADT-TKSG-KLSFPDFLKVM-HTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 334 ~~~~~~f~~~D~-d~~g-~i~~~ef~~~~-~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
+.++.+|+.||. |++| .|+.+||..++ ..+ .......+++.+|+.+|.|++|.|+++||..++...
T Consensus 10 ~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~-g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~ 78 (93)
T 1xk4_A 10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETES-PQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM 78 (93)
T ss_dssp HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHS-CHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHC-cccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 568899999999 9999 99999999999 443 211223467899999999999999999999999764
No 437
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=98.75 E-value=2.3e-08 Score=77.10 Aligned_cols=66 Identities=6% Similarity=0.109 Sum_probs=58.9
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
..++.+|+.||.|++|.|+.+||..++... +.....+++..+|+.+|.+++|.|+++||..++...
T Consensus 32 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~ 97 (107)
T 2d58_A 32 EGFKEKYMEFDLNGNGDIDIMSLKRMLEKL-GVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 97 (107)
T ss_dssp HHHHHHHTTSCCCTTSCEEHHHHHHHHHHT-TCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSS
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHc
Confidence 568899999999999999999999999877 344567899999999999999999999999998653
No 438
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=98.74 E-value=3.1e-08 Score=75.87 Aligned_cols=62 Identities=11% Similarity=0.059 Sum_probs=55.6
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
++++++|+.+|. ++|+|+.+|++.++.... ...+++..+|+.+|.|++|.|+++||..+|..
T Consensus 15 ~~~~~~F~~~D~-~dG~Is~~el~~~l~~~g---l~~~el~~i~~~~D~d~dG~id~~EF~~~m~~ 76 (106)
T 1eh2_A 15 AKYDAIFDSLSP-VNGFLSGDKVKPVLLNSK---LPVDILGRVWELSDIDHDGMLDRDEFAVAMFL 76 (106)
T ss_dssp HHHHHHHTTSCC-SSSCCBHHHHHHHHHTTT---CCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCC-CCCeEcHHHHHHHHHHcC---CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 567889999999 999999999999998752 45788999999999999999999999999864
No 439
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=98.71 E-value=3.8e-08 Score=78.81 Aligned_cols=63 Identities=16% Similarity=0.071 Sum_probs=56.8
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
.++++++|+.|| |++|+|+.+|++.++.... ...+++..+|+.+|.|+||.|+++||..+|..
T Consensus 50 ~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~g---l~~~el~~I~~~~D~d~dG~Ld~~EF~~am~l 112 (139)
T 2jq6_A 50 KPTYDEIFYTLS-PVNGKITGANAKKEMVKSK---LPNTVLGKIWKLADVDKDGLLDDEEFALANHL 112 (139)
T ss_dssp HHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTT---CCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCeECHHHHHHHHHHhC---cCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 567899999999 9999999999999998742 55788999999999999999999999999865
No 440
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=98.71 E-value=1.9e-08 Score=74.83 Aligned_cols=66 Identities=14% Similarity=0.096 Sum_probs=57.5
Q ss_pred HHHHHHHHhhc-CCCCC-cccHHHHHHHHHh---hccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 334 KEVVDAFKAAD-TTKSG-KLSFPDFLKVMHT---HSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 334 ~~~~~~f~~~D-~d~~g-~i~~~ef~~~~~~---~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
+.++.+|+.|| .|++| .|+.+||..++.. . ......++++.+|+.+|.+++|.|+++||..++..+
T Consensus 10 ~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~-g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 80 (90)
T 1k8u_A 10 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTI-GSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL 80 (90)
T ss_dssp HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCC-GGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhccc-CCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 56889999999 59999 9999999999986 4 334456789999999999999999999999998754
No 441
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=98.71 E-value=3.6e-08 Score=75.44 Aligned_cols=67 Identities=12% Similarity=0.061 Sum_probs=54.4
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHh----hccCCCCh-----------HHHHHHHHHhCCCCCCcccHHHHHHHH
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHT----HSKAEDIP-----------KEVVDAFKAADTTKSGTVPAKYLKHVL 397 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~----~~~~~~~~-----------~~~~~~f~~~D~~~~G~is~~ef~~~l 397 (441)
...++.+|+.||.|++|.|+.+||..++.. ........ ..+..+|+.+|.|++|.|+++||..++
T Consensus 19 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~ 98 (103)
T 1snl_A 19 RFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLAST 98 (103)
T ss_dssp CCCHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHH
T ss_pred cCCHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHH
Confidence 345889999999999999999999999885 22222111 248889999999999999999999988
Q ss_pred HH
Q psy2947 398 VN 399 (441)
Q Consensus 398 ~~ 399 (441)
..
T Consensus 99 ~~ 100 (103)
T 1snl_A 99 QR 100 (103)
T ss_dssp HC
T ss_pred hc
Confidence 53
No 442
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.70 E-value=9.4e-09 Score=96.54 Aligned_cols=82 Identities=9% Similarity=-0.031 Sum_probs=58.7
Q ss_pred CCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhH-HH-HhhcccccCC-chh
Q psy2947 128 CKNLTHLYLDNNLLDALP-GFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRD-EV-LRKQKKLHQP-SRL 203 (441)
Q Consensus 128 l~~L~~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~-~~-l~~~~~~~~p-~~l 203 (441)
+++|+.++|++|+++.|| .+|.++++|+.|++.+| +.... +..+..+..+. .+ +.. .+..++ ..+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~---------~~aF~~~~~L~~~l~l~~-~l~~I~~~aF 293 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIG---------QRVFSNCGRLAGTLELPA-SVTAIEFGAF 293 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEEC---------TTTTTTCTTCCEEEEECT-TCCEECTTTT
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceeh---------HHHhhCChhccEEEEEcc-cceEEchhhh
Confidence 678999999999999998 67889999999999988 43322 23455555554 44 333 444454 577
Q ss_pred hhhhhhcccccccccCC
Q psy2947 204 QDLAVQSVIASKENFFE 220 (441)
Q Consensus 204 ~~l~~l~~l~l~~n~~~ 220 (441)
..+.+|+.++++.|.+.
T Consensus 294 ~~c~~L~~l~l~~n~i~ 310 (329)
T 3sb4_A 294 MGCDNLRYVLATGDKIT 310 (329)
T ss_dssp TTCTTEEEEEECSSCCC
T ss_pred hCCccCCEEEeCCCccC
Confidence 88889999988777554
No 443
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=98.68 E-value=4.4e-08 Score=74.28 Aligned_cols=67 Identities=16% Similarity=0.259 Sum_probs=57.2
Q ss_pred HHHHHHHHhhc-CCCCC-cccHHHHHHHHHh-hc---cCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 334 KEVVDAFKAAD-TTKSG-KLSFPDFLKVMHT-HS---KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 334 ~~~~~~f~~~D-~d~~g-~i~~~ef~~~~~~-~~---~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
+.++.+|+.|| .|++| .|+.+||..++.. +. ......+.++.+|+.+|.+++|.|+++||..++..+
T Consensus 13 ~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~~~ 85 (99)
T 1qls_A 13 ESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL 85 (99)
T ss_dssp HHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 46889999998 99999 9999999999974 21 133456789999999999999999999999998764
No 444
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Probab=98.62 E-value=2.6e-08 Score=75.73 Aligned_cols=67 Identities=16% Similarity=0.244 Sum_probs=54.8
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhc----cC--CCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHS----KA--EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~----~~--~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
.++++++|+.||.+ +|.|+.+|++.++.... +. ....++++.+|+.+|.|++|.|+++||..++...
T Consensus 9 ~~~l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~ 81 (100)
T 1psr_A 9 IIGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDI 81 (100)
T ss_dssp HHHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 35688999999976 79999999999997621 11 2334578889999999999999999999999753
No 445
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.62 E-value=2.5e-08 Score=85.23 Aligned_cols=105 Identities=14% Similarity=0.096 Sum_probs=83.5
Q ss_pred CCcccEEeccCC-CcC--------cccCCCCCCCEEEccCCCCC-----cCCcCccCCCCCcEEEccCCcCCCC---CCc
Q psy2947 60 FSHAFLLSLSYT-PIG--------RRIFKCDTVEVLSLKSNSLT-----SLPPDIGRLTNLRVLCLTDNCLQNA---SIP 122 (441)
Q Consensus 60 l~~L~~l~l~~n-~i~--------~~~~~l~~L~~L~l~~n~l~-----~lp~~~~~l~~L~~L~l~~n~l~~~---~~p 122 (441)
.++|+.|+|++| .|. ..+...++|++|+|++|.|. .+...+...++|++|+|++|.|... .+.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 578999999999 775 34556789999999999998 2455566778999999999999710 134
Q ss_pred hhhhcCCCCCEEEc--cCCCCCc-----cchhhcCCCCCCEEEccCCcC
Q psy2947 123 FTLTFCKNLTHLYL--DNNLLDA-----LPGFLLSMPQLDTVYRHGNHN 164 (441)
Q Consensus 123 ~~~~~l~~L~~L~l--~~n~l~~-----lp~~~~~l~~L~~L~l~~N~~ 164 (441)
..+...++|++|+| ++|.|+. +...+...++|+.|+|++|.+
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 55677789999999 8899974 446677778999999999985
No 446
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=98.59 E-value=7.1e-08 Score=72.63 Aligned_cols=67 Identities=16% Similarity=0.199 Sum_probs=54.9
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhc----cCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHS----KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~----~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
.++++.+|+.||. ++|+|+.+|+..++.... +.....++++.+|+.+|.|++|.|+++||..++...
T Consensus 8 ~~~l~~~F~~fD~-~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~ 78 (96)
T 1a4p_A 8 METMMFTFHKFAG-DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 78 (96)
T ss_dssp HHHHHHHHHHHHG-GGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC-CCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3568899999993 567999999999997521 223446789999999999999999999999999763
No 447
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.52 E-value=9.5e-09 Score=104.51 Aligned_cols=26 Identities=8% Similarity=-0.128 Sum_probs=17.3
Q ss_pred cccccCCchhhhhhhhcccccccccC
Q psy2947 194 QKKLHQPSRLQDLAVQSVIASKENFF 219 (441)
Q Consensus 194 ~~~~~~p~~l~~l~~l~~l~l~~n~~ 219 (441)
+....+|..+..+++|+.|+++.|.+
T Consensus 280 ~~~~~l~~~~~~~~~L~~L~Ls~~~l 305 (592)
T 3ogk_B 280 MGPNEMPILFPFAAQIRKLDLLYALL 305 (592)
T ss_dssp CCTTTGGGGGGGGGGCCEEEETTCCC
T ss_pred cchhHHHHHHhhcCCCcEEecCCCcC
Confidence 33445566667777888888877753
No 448
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.51 E-value=1.7e-07 Score=96.65 Aligned_cols=117 Identities=14% Similarity=0.138 Sum_probs=92.9
Q ss_pred cccCCCccCHHHHHHHHHHcCCCcCHHHHHHHHH-----------hCCCcccHHHHHHHHHhhcCCCCCHHHHHHHHHhh
Q psy2947 275 FARNGTIKTLDELSVIMRSLGMSPTIAELKKYLA-----------EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAA 343 (441)
Q Consensus 275 ~d~~G~i~~~~el~~~~~~~~~~~~~~~~~~~~~-----------~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~ 343 (441)
.|.+|.| +.+|+..+++..+. ...++.++++ +++|.|+|+||.+++..... ..+++++|+.|
T Consensus 166 ~n~dG~I-s~kEl~~~l~~~~~--~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~~----R~EI~eiF~~y 238 (816)
T 3qr0_A 166 EMEKNKI-PVKAIQKCLSKDKD--DRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALLE----RSEIEGIFKEL 238 (816)
T ss_dssp SCCSSEE-EHHHHHHHHCSCHH--HHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHCC----CTHHHHHHHHH
T ss_pred CCCCCCC-CHHHHHHHHHhcCC--hHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcCC----HHHHHHHHHHH
Confidence 3456899 79999988875431 1234555443 24689999999999998743 46899999999
Q ss_pred cCCCCCcccHHHHHHHHHhhccCC---------CChHHHHHHHHHhCC--C----CCCcccHHHHHHHHHH
Q psy2947 344 DTTKSGKLSFPDFLKVMHTHSKAE---------DIPKEVVDAFKAADT--T----KSGTVPAKYLKHVLVN 399 (441)
Q Consensus 344 D~d~~g~i~~~ef~~~~~~~~~~~---------~~~~~~~~~f~~~D~--~----~~G~is~~ef~~~l~~ 399 (441)
|.|++|.|+. ||..++...++.. ...+.++++++.+|. + ++|.|++++|..+|..
T Consensus 239 ~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~S 308 (816)
T 3qr0_A 239 SKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMC 308 (816)
T ss_dssp TTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHHS
T ss_pred ccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHhhc
Confidence 9999999999 9999999886543 356789999999887 5 7899999999999975
No 449
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.47 E-value=6.7e-08 Score=92.12 Aligned_cols=134 Identities=18% Similarity=0.042 Sum_probs=92.3
Q ss_pred CCcccEEeccCCCcCc----cc-CCCCCCCEEEccCCCCCcCC-----cCc-cCCCCCcEEEccCCcCCC---CCCchhh
Q psy2947 60 FSHAFLLSLSYTPIGR----RI-FKCDTVEVLSLKSNSLTSLP-----PDI-GRLTNLRVLCLTDNCLQN---ASIPFTL 125 (441)
Q Consensus 60 l~~L~~l~l~~n~i~~----~~-~~l~~L~~L~l~~n~l~~lp-----~~~-~~l~~L~~L~l~~n~l~~---~~~p~~~ 125 (441)
..+|+.|+|++|.|.. .+ ..+++|+.|+|++|.|+... ..+ ...++|++|+|++|.|+. ..++..+
T Consensus 100 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L 179 (372)
T 3un9_A 100 RHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGL 179 (372)
T ss_dssp SSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHH
T ss_pred CCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHH
Confidence 3689999999997752 12 23568999999999997322 222 346889999999999861 0244455
Q ss_pred hcCCCCCEEEccCCCCCc-----cchhhcCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-Hhhccccc
Q psy2947 126 TFCKNLTHLYLDNNLLDA-----LPGFLLSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRKQKKLH 198 (441)
Q Consensus 126 ~~l~~L~~L~l~~n~l~~-----lp~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~~~~~~ 198 (441)
..+++|++|+|++|.|+. ++..+...++|+.|+|++|.+..... ..+...+...+.+..+ +.+|.++.
T Consensus 180 ~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~-----~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 180 AGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAA-----LALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHH-----HHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred hcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHH-----HHHHHHHHhCCCCCEEeccCCCCCH
Confidence 778899999999999963 35667778899999999998643221 1233444445555555 67776643
No 450
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=98.47 E-value=6.6e-07 Score=63.35 Aligned_cols=60 Identities=13% Similarity=0.204 Sum_probs=52.9
Q ss_pred CCCHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhC-CC----CCCcccHHHHHHHHH
Q psy2947 330 EDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAAD-TT----KSGTVPAKYLKHVLV 398 (441)
Q Consensus 330 ~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D-~~----~~G~is~~ef~~~l~ 398 (441)
..+.++++++|+.| .+++|+|+.+|+++ ..++++++.+++.+| .+ ++|.|+++||.++|.
T Consensus 6 ~~~~eel~eAFr~f-~dg~G~It~~eLr~--------~lt~eevd~~i~~~d~~dg~~~~dG~idY~eF~~~m~ 70 (75)
T 1h8b_A 6 TDTAEQVIASFRIL-ASDKPYILAEELRR--------ELPPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALY 70 (75)
T ss_dssp CSTHHHHHHHHHHH-TTSCSSBCHHHHHH--------HSCHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHT
T ss_pred CCCHHHHHHHHHHH-hcCCCCcCHHHHHh--------cCCHHHHHHHHHhcCcccCCCCCCCcCcHHHHHHHHh
Confidence 34678999999999 99999999999998 245789999999999 56 589999999999885
No 451
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=98.42 E-value=7.9e-07 Score=68.87 Aligned_cols=62 Identities=10% Similarity=0.046 Sum_probs=55.1
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
.+++++|+.+|. ++|+|+.+|.+.++... ....+++..+|+..|.|++|.|+++||..+|.-
T Consensus 33 ~~y~~iF~~lD~-~dG~Isg~elr~~~~~s---gLp~~~L~~Iw~laD~d~dG~Ld~~EF~~aM~L 94 (121)
T 3fia_A 33 AKHDQQFHSLKP-ISGFITGDQARNFFFQS---GLPQPVLAQIWALADMNNDGRMDQVEFSIAMKL 94 (121)
T ss_dssp HHHHHHHHHTCC-BTTBEEHHHHHHHHGGG---CCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHhCC-CCCeECHHHHHHHHHHc---CCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence 567889999998 89999999999999865 345788999999999999999999999999863
No 452
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.35 E-value=9.7e-08 Score=97.03 Aligned_cols=100 Identities=16% Similarity=0.206 Sum_probs=67.4
Q ss_pred cccEEeccCCC-c-----CcccCCCCCCCEEEccCCCCCc-----CCcCccCCCCCcEEEccCCcCCC---CCCchhhhc
Q psy2947 62 HAFLLSLSYTP-I-----GRRIFKCDTVEVLSLKSNSLTS-----LPPDIGRLTNLRVLCLTDNCLQN---ASIPFTLTF 127 (441)
Q Consensus 62 ~L~~l~l~~n~-i-----~~~~~~l~~L~~L~l~~n~l~~-----lp~~~~~l~~L~~L~l~~n~l~~---~~~p~~~~~ 127 (441)
+|+.|++++|. + +.....+++|++|+|++|.++. ++..+..+++|+.|++++|.++. +.++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 38888888773 2 2223367788888888887652 22234567788888888887750 123333467
Q ss_pred CCCCCEEEccCCCCCccchhhcCCCCCCEEEccC
Q psy2947 128 CKNLTHLYLDNNLLDALPGFLLSMPQLDTVYRHG 161 (441)
Q Consensus 128 l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~ 161 (441)
+++|++|++++|.+..+|..+..+++|+.|++++
T Consensus 219 ~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILELVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp CTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECB
T ss_pred CCCCcEEeccCccHHHHHHHHhhhhHHHhhcccc
Confidence 7888888888888777777777777788877764
No 453
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.34 E-value=1.5e-07 Score=80.28 Aligned_cols=90 Identities=13% Similarity=0.124 Sum_probs=71.9
Q ss_pred cccCCCCCCCEEEccCC-CCC-----cCCcCccCCCCCcEEEccCCcCCC---CCCchhhhcCCCCCEEEccCCCCCc--
Q psy2947 75 RRIFKCDTVEVLSLKSN-SLT-----SLPPDIGRLTNLRVLCLTDNCLQN---ASIPFTLTFCKNLTHLYLDNNLLDA-- 143 (441)
Q Consensus 75 ~~~~~l~~L~~L~l~~n-~l~-----~lp~~~~~l~~L~~L~l~~n~l~~---~~~p~~~~~l~~L~~L~l~~n~l~~-- 143 (441)
..+...++|+.|+|++| .|. .+...+...++|++|+|++|.|.. ..+...+...++|++|+|++|.|+.
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 44567889999999999 987 355567778999999999999861 0133445667899999999999974
Q ss_pred ---cchhhcCCCCCCEEEc--cCCcC
Q psy2947 144 ---LPGFLLSMPQLDTVYR--HGNHN 164 (441)
Q Consensus 144 ---lp~~~~~l~~L~~L~l--~~N~~ 164 (441)
+...+...++|+.|+| ++|.+
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i 135 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPL 135 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCC
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCC
Confidence 4567788899999999 88885
No 454
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.30 E-value=1.4e-06 Score=81.53 Aligned_cols=83 Identities=20% Similarity=0.279 Sum_probs=56.7
Q ss_pred CCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCch-hhhcCCCCC-EEEccCCCCCccc-hhhcCCCCCC
Q psy2947 80 CDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPF-TLTFCKNLT-HLYLDNNLLDALP-GFLLSMPQLD 155 (441)
Q Consensus 80 l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~-~~~~l~~L~-~L~l~~n~l~~lp-~~~~~l~~L~ 155 (441)
+++|+.|+|++|+++.||.. |.++++|+.|++++| ++ .++. .|.++.+|+ .+++.+ .++.|+ .+|.++++|+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~--~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~ 300 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LK--TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLR 300 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CC--EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cc--eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCC
Confidence 56777777777777777665 777777777777776 55 4554 456777777 777766 666665 6677777777
Q ss_pred EEEccCCcCcc
Q psy2947 156 TVYRHGNHNYF 166 (441)
Q Consensus 156 ~L~l~~N~~~~ 166 (441)
.|++++|.+..
T Consensus 301 ~l~l~~n~i~~ 311 (329)
T 3sb4_A 301 YVLATGDKITT 311 (329)
T ss_dssp EEEECSSCCCE
T ss_pred EEEeCCCccCc
Confidence 77777766544
No 455
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.24 E-value=1e-06 Score=79.19 Aligned_cols=82 Identities=18% Similarity=0.230 Sum_probs=54.1
Q ss_pred CCCCE--EEccCCCCCcCCcC----ccCCCCCcEEEccCCcCCCC--CCchhhhcCCCCCEEEccCCCCCccc--hhhcC
Q psy2947 81 DTVEV--LSLKSNSLTSLPPD----IGRLTNLRVLCLTDNCLQNA--SIPFTLTFCKNLTHLYLDNNLLDALP--GFLLS 150 (441)
Q Consensus 81 ~~L~~--L~l~~n~l~~lp~~----~~~l~~L~~L~l~~n~l~~~--~~p~~~~~l~~L~~L~l~~n~l~~lp--~~~~~ 150 (441)
+.|.. ++++.|+...++.. ...+++|+.|+|++|+|+ + .+|..+..+++|+.|+|++|+|+.+. ..+..
T Consensus 141 p~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~-~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~ 219 (267)
T 3rw6_A 141 PDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLY-RLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKG 219 (267)
T ss_dssp HHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCC-CCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTT
T ss_pred cchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCC-CCccchhHHhhCCCCCEEECCCCccCCchhhhhccc
Confidence 34444 56677755533322 245778888888888887 3 33455677888888888888887663 23333
Q ss_pred CCCCCEEEccCCcC
Q psy2947 151 MPQLDTVYRHGNHN 164 (441)
Q Consensus 151 l~~L~~L~l~~N~~ 164 (441)
+ +|+.|+|++|++
T Consensus 220 l-~L~~L~L~~Npl 232 (267)
T 3rw6_A 220 L-KLEELWLDGNSL 232 (267)
T ss_dssp S-CCSEEECTTSTT
T ss_pred C-CcceEEccCCcC
Confidence 3 788888888885
No 456
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.21 E-value=7.9e-08 Score=97.69 Aligned_cols=102 Identities=18% Similarity=0.173 Sum_probs=55.0
Q ss_pred CCcccEEeccCCCcCc----ccC-CCCCCCEEEccCC-CCCc--CCcCccCCCCCcEEEccCCcCCCCCCchhh----hc
Q psy2947 60 FSHAFLLSLSYTPIGR----RIF-KCDTVEVLSLKSN-SLTS--LPPDIGRLTNLRVLCLTDNCLQNASIPFTL----TF 127 (441)
Q Consensus 60 l~~L~~l~l~~n~i~~----~~~-~l~~L~~L~l~~n-~l~~--lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~----~~ 127 (441)
+++|+.|+|++|.+.. .+. .+++|+.|+|++| .++. ++.-+..+++|++|++++|.++ +..+..+ ..
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~-~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVD-DVSGHWLSHFPDT 182 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEE-CCCGGGGGGSCTT
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccC-CcchHHHHHHhhc
Confidence 5566777777665432 222 4566777777666 4442 3333445666777777766655 2222222 24
Q ss_pred CCCCCEEEccCCC--CC--ccchhhcCCCCCCEEEccCC
Q psy2947 128 CKNLTHLYLDNNL--LD--ALPGFLLSMPQLDTVYRHGN 162 (441)
Q Consensus 128 l~~L~~L~l~~n~--l~--~lp~~~~~l~~L~~L~l~~N 162 (441)
+++|+.|++++|. ++ .++..+..+++|+.|++++|
T Consensus 183 ~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 183 YTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred CCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 4566667666665 21 12222334566666666665
No 457
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=98.21 E-value=2.1e-06 Score=68.39 Aligned_cols=35 Identities=37% Similarity=0.496 Sum_probs=17.1
Q ss_pred CCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcC
Q psy2947 82 TVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCL 116 (441)
Q Consensus 82 ~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l 116 (441)
+|+.|+|++|+|+.||.. |..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 355555555555555444 44444444444444433
No 458
>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3
Probab=98.20 E-value=3.6e-07 Score=73.19 Aligned_cols=62 Identities=10% Similarity=0.073 Sum_probs=39.4
Q ss_pred HHHHHHHHhCCC-CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy2947 372 EVVDAFKAADTT-KSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435 (441)
Q Consensus 372 ~~~~~f~~~D~~-~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~~ 435 (441)
.+.-+|..+|.| +||.|+..|+..+++.+. ..+..++.+|+.+|.|+||.||++||.+++..
T Consensus 78 ~l~W~F~~lD~n~~DG~Isr~EL~~i~~~l~--~~e~cv~~ff~~cD~d~Dg~ISl~Ew~~Clg~ 140 (151)
T 1sra_A 78 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLI--PMEHCTTRFFETCDLDNDKYIALDEWAGCFGI 140 (151)
T ss_dssp HHHHHHHHHCCTTCSSEECTTTTGGGGSTTS--TTGGGHHHHHHHHCTTCSSSEEHHHHHHHTTC
T ss_pred HHHhHHHHHCCCCCCCcCcHHHHHHHHHHhc--ChHHHHHHHHHHhCCCCCCcCCHHHHHHHhCC
Confidence 455566666765 677777776666664432 34555666777777777777777777766643
No 459
>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3
Probab=98.15 E-value=7.2e-07 Score=71.46 Aligned_cols=63 Identities=13% Similarity=0.054 Sum_probs=54.1
Q ss_pred HHHHHHHHHhhcCC-CCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 333 PKEVVDAFKAADTT-KSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 333 ~~~~~~~f~~~D~d-~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
...++..|..+|.| +||.|+..|+..++.... ..+.-++..|+.+|.|+||.||.+||...+.
T Consensus 76 ~~~l~W~F~~lD~n~~DG~Isr~EL~~i~~~l~---~~e~cv~~ff~~cD~d~Dg~ISl~Ew~~Clg 139 (151)
T 1sra_A 76 IFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLI---PMEHCTTRFFETCDLDNDKYIALDEWAGCFG 139 (151)
T ss_dssp HHHHHHHHHHHCCTTCSSEECTTTTGGGGSTTS---TTGGGHHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred hhHHHhHHHHHCCCCCCCcCcHHHHHHHHHHhc---ChHHHHHHHHHHhCCCCCCcCCHHHHHHHhC
Confidence 35689999999997 999999999998886542 3356788999999999999999999998873
No 460
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.08 E-value=1.2e-06 Score=82.95 Aligned_cols=152 Identities=14% Similarity=0.061 Sum_probs=88.6
Q ss_pred CCcccEEeccCCC-------------cCcccCCCCCCCEEEccCCCCCcCCcCccCCCCCcEEEccCCcCCCCCCchhhh
Q psy2947 60 FSHAFLLSLSYTP-------------IGRRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNASIPFTLT 126 (441)
Q Consensus 60 l~~L~~l~l~~n~-------------i~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~ 126 (441)
+++|+.|.+..+. ++..+..+++|+.|+|++|.-..++. + .+++|++|++..+.+. ...-..+.
T Consensus 138 l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~l~~-~-~~~~L~~L~L~~~~l~-~~~l~~l~ 214 (362)
T 2ra8_A 138 FAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLSIGK-K-PRPNLKSLEIISGGLP-DSVVEDIL 214 (362)
T ss_dssp HTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCBCCS-C-BCTTCSEEEEECSBCC-HHHHHHHH
T ss_pred cchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCceecc-c-cCCCCcEEEEecCCCC-hHHHHHHH
Confidence 5677777775441 22334567899999998874224444 4 3789999999888775 22222333
Q ss_pred --cCCCCCEEEccC--CC------CCccchhh--cCCCCCCEEEccCCcCccCcccccccccccccccccchhHHH-Hhh
Q psy2947 127 --FCKNLTHLYLDN--NL------LDALPGFL--LSMPQLDTVYRHGNHNYFKSTFMWYHSDIHARIRSTSTRDEV-LRK 193 (441)
Q Consensus 127 --~l~~L~~L~l~~--n~------l~~lp~~~--~~l~~L~~L~l~~N~~~~~~~~~~~~~~~p~~l~~l~~~~~~-l~~ 193 (441)
.+++|++|+|+. |. +..+...+ ..+++|+.|+|.+|.+....... +-. ...++.+..+ ++.
T Consensus 215 ~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~-----la~-a~~~~~L~~LdLs~ 288 (362)
T 2ra8_A 215 GSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM-----FLE-SDILPQLETMDISA 288 (362)
T ss_dssp HSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH-----HHH-CSSGGGCSEEECCS
T ss_pred HccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH-----HHh-CccCCCCCEEECCC
Confidence 688999998853 22 11222222 24789999999888853211000 000 0112333333 455
Q ss_pred ccccc-----CCchhhhhhhhcccccccccCC
Q psy2947 194 QKKLH-----QPSRLQDLAVQSVIASKENFFE 220 (441)
Q Consensus 194 ~~~~~-----~p~~l~~l~~l~~l~l~~n~~~ 220 (441)
|.++. ++..+..+++|+.|+++.|++.
T Consensus 289 n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 289 GVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp SCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 55433 3445567888999999888644
No 461
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.05 E-value=3e-06 Score=76.20 Aligned_cols=95 Identities=23% Similarity=0.249 Sum_probs=70.9
Q ss_pred CcccE--EeccCC---CcCcc----cCCCCCCCEEEccCCCCCcCC---cCccCCCCCcEEEccCCcCCCCCCchhhhcC
Q psy2947 61 SHAFL--LSLSYT---PIGRR----IFKCDTVEVLSLKSNSLTSLP---PDIGRLTNLRVLCLTDNCLQNASIPFTLTFC 128 (441)
Q Consensus 61 ~~L~~--l~l~~n---~i~~~----~~~l~~L~~L~l~~n~l~~lp---~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l 128 (441)
+.|.. ++++.| .++.. ..++++|+.|+|++|+|+.++ ..+..+++|+.|+|++|+|+ .+ ..+..+
T Consensus 141 p~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~--~~-~~l~~l 217 (267)
T 3rw6_A 141 PDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK--SE-RELDKI 217 (267)
T ss_dssp HHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCC--SG-GGGGGG
T ss_pred cchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccC--Cc-hhhhhc
Confidence 34444 667777 23321 135789999999999999654 45778999999999999998 44 345555
Q ss_pred C--CCCEEEccCCCCC-ccc-------hhhcCCCCCCEEE
Q psy2947 129 K--NLTHLYLDNNLLD-ALP-------GFLLSMPQLDTVY 158 (441)
Q Consensus 129 ~--~L~~L~l~~n~l~-~lp-------~~~~~l~~L~~L~ 158 (441)
. +|++|+|++|.+. .+| ..+..+++|+.|+
T Consensus 218 ~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 218 KGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp TTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred ccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 5 9999999999995 455 2467789998875
No 462
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.00 E-value=5e-07 Score=91.78 Aligned_cols=105 Identities=23% Similarity=0.286 Sum_probs=77.4
Q ss_pred CCCcccEEeccCC-C-----cCcccCCCCCCCEEEccCCCCCc-----CCcCccCCCCCcEEEccCCc--CCCCCCchhh
Q psy2947 59 YFSHAFLLSLSYT-P-----IGRRIFKCDTVEVLSLKSNSLTS-----LPPDIGRLTNLRVLCLTDNC--LQNASIPFTL 125 (441)
Q Consensus 59 ~l~~L~~l~l~~n-~-----i~~~~~~l~~L~~L~l~~n~l~~-----lp~~~~~l~~L~~L~l~~n~--l~~~~~p~~~ 125 (441)
.+++|+.|++++| . ++..+..+++|++|+|++|.++. ++.-...+++|+.|++++|. +....++.-+
T Consensus 128 ~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~ 207 (594)
T 2p1m_B 128 SFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLV 207 (594)
T ss_dssp HCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHH
T ss_pred hCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHH
Confidence 4689999999998 3 33344478999999999998763 33334467899999999987 2200122223
Q ss_pred hcCCCCCEEEccCC-CCCccchhhcCCCCCCEEEccCCc
Q psy2947 126 TFCKNLTHLYLDNN-LLDALPGFLLSMPQLDTVYRHGNH 163 (441)
Q Consensus 126 ~~l~~L~~L~l~~n-~l~~lp~~~~~l~~L~~L~l~~N~ 163 (441)
..+++|++|++++| .++.+|..+..+++|+.|+++.+.
T Consensus 208 ~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~ 246 (594)
T 2p1m_B 208 TRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYT 246 (594)
T ss_dssp HHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCC
T ss_pred HhCCCCcEEecCCCCcHHHHHHHHhcCCcceEccccccc
Confidence 56799999999998 556688888889999999977664
No 463
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.94 E-value=1.7e-05 Score=76.12 Aligned_cols=101 Identities=18% Similarity=0.213 Sum_probs=51.4
Q ss_pred CCCCcccEEeccCC---CcCcccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCch-hhhcCCCCC
Q psy2947 58 QYFSHAFLLSLSYT---PIGRRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPF-TLTFCKNLT 132 (441)
Q Consensus 58 ~~l~~L~~l~l~~n---~i~~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~-~~~~l~~L~ 132 (441)
.++.+|+.++++.| .|+...+.+.+|+.+.|.. .++.|+.. |.++++|+.+++..| ++ .++. .|.+ .+|+
T Consensus 177 ~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~--~I~~~aF~~-~~L~ 251 (401)
T 4fdw_A 177 YYCYNLKKADLSKTKITKLPASTFVYAGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VS--TIGQEAFRE-SGIT 251 (401)
T ss_dssp TTCTTCCEEECTTSCCSEECTTTTTTCCCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CC--EECTTTTTT-CCCS
T ss_pred hCcccCCeeecCCCcceEechhhEeecccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-cc--Ccccccccc-CCcc
Confidence 34445555555544 2333333344555555542 24444443 555555555555543 22 3333 2233 4555
Q ss_pred EEEccCCCCCccc-hhhcCCCCCCEEEccCCcC
Q psy2947 133 HLYLDNNLLDALP-GFLLSMPQLDTVYRHGNHN 164 (441)
Q Consensus 133 ~L~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~~ 164 (441)
.+.+ .+.+..|+ .+|.++++|+.+.+.+|.+
T Consensus 252 ~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~ 283 (401)
T 4fdw_A 252 TVKL-PNGVTNIASRAFYYCPELAEVTTYGSTF 283 (401)
T ss_dssp EEEE-ETTCCEECTTTTTTCTTCCEEEEESSCC
T ss_pred EEEe-CCCccEEChhHhhCCCCCCEEEeCCccc
Confidence 5555 34455664 5666777777777776654
No 464
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.92 E-value=1.1e-05 Score=64.20 Aligned_cols=65 Identities=31% Similarity=0.395 Sum_probs=47.3
Q ss_pred CEEEccCCCCC--cCCcCccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEcc
Q psy2947 84 EVLSLKSNSLT--SLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLDALP-GFLLSMPQLDTVYRH 160 (441)
Q Consensus 84 ~~L~l~~n~l~--~lp~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~lp-~~~~~l~~L~~L~l~ 160 (441)
..++.+++.++ .+|..+ | .+|++|+|++|+|+.|| ..|..+++|+.|+|+
T Consensus 11 ~~v~Cs~~~L~~~~vP~~l---------------------p------~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 63 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAF---------------------P------VDTTELVLTGNNLTALPPGLLDALPALRTAHLG 63 (130)
T ss_dssp TEEECCSSCCCTTTSCSCC---------------------C------TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECC
T ss_pred CEEEeCCCCCccccCCCCC---------------------C------cCCCEEECCCCcCCccChhhhhhccccCEEEec
Confidence 47788888887 777432 2 23566677777777666 456778889999999
Q ss_pred CCcCccCcccccccc
Q psy2947 161 GNHNYFKSTFMWYHS 175 (441)
Q Consensus 161 ~N~~~~~~~~~~~~~ 175 (441)
+|++.|.|.+.|+..
T Consensus 64 ~NP~~CdC~l~~l~~ 78 (130)
T 3rfe_A 64 ANPWRCDCRLVPLRA 78 (130)
T ss_dssp SSCCBCSGGGHHHHH
T ss_pred CCCeeccCccHHHHH
Confidence 999999998776543
No 465
>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=97.88 E-value=0.00011 Score=56.39 Aligned_cols=57 Identities=9% Similarity=0.154 Sum_probs=43.3
Q ss_pred CCCcccHHHHHHHHHhhcCCC-CCHHHHHHHHHhhcCCC--------CCcccHHHHHHHHHhhccC
Q psy2947 310 KGGKLSFPDFLKVMHTHSKAE-DIPKEVVDAFKAADTTK--------SGKLSFPDFLKVMHTHSKA 366 (441)
Q Consensus 310 ~~g~i~~~ef~~~~~~~~~~~-~~~~~~~~~f~~~D~d~--------~g~i~~~ef~~~~~~~~~~ 366 (441)
++|.|+.++|..++..+.... .+..-+..+|+.||.|+ +|.|++.||..++..+..+
T Consensus 44 p~G~i~~e~F~~i~~~ffp~~~~p~~~~~~lF~~Fd~~~~~~~~~~~~g~I~fkefi~~LSll~rG 109 (118)
T 1tuz_A 44 QGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDVSCYFSLLEGG 109 (118)
T ss_dssp ETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHHHHHHHHHHSC
T ss_pred CCCCCCHHHHHHHHHHhCcCCCCHHHHHHHHHHHHhcccccccccCCCCeEeHHHHHHHHHHhcCC
Confidence 578888888888888887765 66677777888888874 7888888888877765443
No 466
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.84 E-value=7.2e-06 Score=77.52 Aligned_cols=103 Identities=21% Similarity=0.134 Sum_probs=65.1
Q ss_pred CCCcccEEeccCC---CcCcccCCCCCCCEEEccCCCCC-cCCcCcc--CCCCCcEEEccC--CcCCCCC-----Cchhh
Q psy2947 59 YFSHAFLLSLSYT---PIGRRIFKCDTVEVLSLKSNSLT-SLPPDIG--RLTNLRVLCLTD--NCLQNAS-----IPFTL 125 (441)
Q Consensus 59 ~l~~L~~l~l~~n---~i~~~~~~l~~L~~L~l~~n~l~-~lp~~~~--~l~~L~~L~l~~--n~l~~~~-----~p~~~ 125 (441)
.+++|+.|++++| .++. + .+++|+.|+|..+.++ .....+. .+++|+.|+|+. |... +. +...+
T Consensus 170 ~~P~L~~L~L~g~~~l~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~-~~~~~~~l~~~l 246 (362)
T 2ra8_A 170 AMPLLNNLKIKGTNNLSIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYG-FDGDMNVFRPLF 246 (362)
T ss_dssp TCTTCCEEEEECCBTCBCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGT-CCSCGGGTGGGS
T ss_pred cCCCCcEEEEeCCCCceecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccc-cchhHHHHHHHH
Confidence 3578888888877 2333 2 3778999999888776 1112232 678888888853 2211 11 11122
Q ss_pred --hcCCCCCEEEccCCCCCc-cchhh---cCCCCCCEEEccCCcC
Q psy2947 126 --TFCKNLTHLYLDNNLLDA-LPGFL---LSMPQLDTVYRHGNHN 164 (441)
Q Consensus 126 --~~l~~L~~L~l~~n~l~~-lp~~~---~~l~~L~~L~l~~N~~ 164 (441)
..+++|++|+|++|.++. .+..+ ..+++|+.|+|+.|.+
T Consensus 247 ~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L 291 (362)
T 2ra8_A 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVL 291 (362)
T ss_dssp CTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCC
T ss_pred hcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCC
Confidence 246889999998888853 22222 2467899999988875
No 467
>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=97.80 E-value=0.00019 Score=55.21 Aligned_cols=83 Identities=17% Similarity=0.165 Sum_probs=51.8
Q ss_pred CcccHHHHHHHHHhhccCCCChHHHHHHHHHh-C-----CCCCCcccHHHHHHHHHHhCC-C-CCHHHHHHHHHHhCCCC
Q psy2947 349 GKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAA-D-----TTKSGTVPAKYLKHVLVNWGE-G-LSSKEVDQIFREANVTM 420 (441)
Q Consensus 349 g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~-D-----~~~~G~is~~ef~~~l~~~~~-~-l~~~~~~~l~~~~d~d~ 420 (441)
+.++.++|.++...-.-. ..+++.+++.| | ...+|.|+.++|+.+++..-+ . .+..-+..+|..+|.++
T Consensus 6 s~lspe~l~~L~~~t~fs---~~elk~~y~~F~~g~~~k~cp~G~i~~e~F~~i~~~ffp~~~~p~~~~~~lF~~Fd~~~ 82 (118)
T 1tuz_A 6 GLISPSDFAQLQKYMEYS---TKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGH 82 (118)
T ss_dssp SCSCHHHHHHHHHHHHHC---CCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCC
T ss_pred CcCCHHHHHHHHHHcccC---HHHHHHHHHHHccccccccCCCCCCCHHHHHHHHHHhCcCCCCHHHHHHHHHHHHhccc
Confidence 345666665544332111 12344444444 2 345788888888888887533 2 45666777888888764
Q ss_pred --------CCceeHHHHHHHHh
Q psy2947 421 --------NSKVRYEDFVKIAC 434 (441)
Q Consensus 421 --------dg~i~~~ef~~~l~ 434 (441)
+|.|++.||+.++.
T Consensus 83 ~~~~~~~~~g~I~fkefi~~LS 104 (118)
T 1tuz_A 83 CLNETNVTKDVVCLNDVSCYFS 104 (118)
T ss_dssp CTTCCCCCSCCEEHHHHHHHHH
T ss_pred ccccccCCCCeEeHHHHHHHHH
Confidence 78999999988773
No 468
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.72 E-value=7.8e-05 Score=71.57 Aligned_cols=97 Identities=22% Similarity=0.221 Sum_probs=54.2
Q ss_pred cccEEeccCC--CcCcccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCchhhhcCCCCCEEEccC
Q psy2947 62 HAFLLSLSYT--PIGRRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDN 138 (441)
Q Consensus 62 ~L~~l~l~~n--~i~~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~ 138 (441)
+|+.+.+..+ .|+...+.-.+|+.+.+.. .++.++.. |.++.+|+.+++++|.++ .+|...-...+|+.+.+.
T Consensus 136 ~L~~i~l~~~i~~I~~~aF~~~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~--~I~~~aF~~~~L~~l~lp- 211 (401)
T 4fdw_A 136 QIAKVVLNEGLKSIGDMAFFNSTVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT--KLPASTFVYAGIEEVLLP- 211 (401)
T ss_dssp CCSEEECCTTCCEECTTTTTTCCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS--EECTTTTTTCCCSEEECC-
T ss_pred CccEEEeCCCccEECHHhcCCCCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce--EechhhEeecccCEEEeC-
Confidence 4555555544 3333222223566666654 55555544 666666666666666665 555543334666666665
Q ss_pred CCCCccc-hhhcCCCCCCEEEccCC
Q psy2947 139 NLLDALP-GFLLSMPQLDTVYRHGN 162 (441)
Q Consensus 139 n~l~~lp-~~~~~l~~L~~L~l~~N 162 (441)
+.+..|+ .+|.++++|+.+.+..|
T Consensus 212 ~~l~~I~~~aF~~~~~L~~l~l~~~ 236 (401)
T 4fdw_A 212 VTLKEIGSQAFLKTSQLKTIEIPEN 236 (401)
T ss_dssp TTCCEECTTTTTTCTTCCCEECCTT
T ss_pred CchheehhhHhhCCCCCCEEecCCC
Confidence 3365565 55666666666666554
No 469
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.67 E-value=4.1e-05 Score=63.83 Aligned_cols=94 Identities=9% Similarity=0.063 Sum_probs=64.4
Q ss_pred CCCcCcccCCCCCCCEEEccCCCCCcC-CcCccCCCCCcEEEccCCc-CCCCCCchhhhcC----CCCCEEEccCCC-CC
Q psy2947 70 YTPIGRRIFKCDTVEVLSLKSNSLTSL-PPDIGRLTNLRVLCLTDNC-LQNASIPFTLTFC----KNLTHLYLDNNL-LD 142 (441)
Q Consensus 70 ~n~i~~~~~~l~~L~~L~l~~n~l~~l-p~~~~~l~~L~~L~l~~n~-l~~~~~p~~~~~l----~~L~~L~l~~n~-l~ 142 (441)
+|.+|.....-..|+.|+++++.|+.. -..+..+++|++|+|+++. +++ .-=..+..+ ++|++|+|++|. |+
T Consensus 50 ~~~LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD-~gL~~L~~~~~~~~~L~~L~Ls~C~~IT 128 (176)
T 3e4g_A 50 YNHLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIED-GCLERLSQLENLQKSMLEMEIISCGNVT 128 (176)
T ss_dssp GGGSCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCH-HHHHHHHTCHHHHHHCCEEEEESCTTCC
T ss_pred cccCCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCH-HHHHHHHhcccccCCCCEEEcCCCCcCC
Confidence 445665433334789999999888722 1347789999999999985 551 101124443 369999999984 76
Q ss_pred ccc-hhhcCCCCCCEEEccCCcC
Q psy2947 143 ALP-GFLLSMPQLDTVYRHGNHN 164 (441)
Q Consensus 143 ~lp-~~~~~l~~L~~L~l~~N~~ 164 (441)
.-- ..+.++++|+.|++++++-
T Consensus 129 D~Gl~~L~~~~~L~~L~L~~c~~ 151 (176)
T 3e4g_A 129 DKGIIALHHFRNLKYLFLSDLPG 151 (176)
T ss_dssp HHHHHHGGGCTTCCEEEEESCTT
T ss_pred HHHHHHHhcCCCCCEEECCCCCC
Confidence 432 4567789999999999874
No 470
>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*
Probab=97.62 E-value=1.6e-05 Score=69.37 Aligned_cols=61 Identities=10% Similarity=0.080 Sum_probs=36.4
Q ss_pred HHHHHHHHhCC-CCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHHh
Q psy2947 372 EVVDAFKAADT-TKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIAC 434 (441)
Q Consensus 372 ~~~~~f~~~D~-~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l~ 434 (441)
.+..+|..+|. |+||.|+..|+..+++.+. ..+..+..+|+..|.|+||.||++||..++.
T Consensus 156 ~v~w~F~~lD~~n~dg~l~~~El~~i~~~l~--~~~~c~~~~~~~cD~n~D~~is~~Ew~~cf~ 217 (229)
T 1nub_A 156 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLI--PMEHCTTRFFETCDLDNDKYIALDEWAGCFG 217 (229)
T ss_dssp HHHHHHHHHTTTTCSSEECTTTTGGGGSTTS--TTGGGHHHHHHHHCTTCSSCEEHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCCCCCCHHHHHHHHHHHh--hHHHHHHHHHHHcCCCCCCcCCHHHHHHHhC
Confidence 34556666666 5666666666666654332 1334456666666666666666666666553
No 471
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.56 E-value=5.3e-05 Score=64.41 Aligned_cols=104 Identities=15% Similarity=0.116 Sum_probs=68.6
Q ss_pred CCcccEEeccCC-CcC--------cccCCCCCCCEEEccCCCCC-----cCCcCccCCCCCcEEEccCCcCCCC---CCc
Q psy2947 60 FSHAFLLSLSYT-PIG--------RRIFKCDTVEVLSLKSNSLT-----SLPPDIGRLTNLRVLCLTDNCLQNA---SIP 122 (441)
Q Consensus 60 l~~L~~l~l~~n-~i~--------~~~~~l~~L~~L~l~~n~l~-----~lp~~~~~l~~L~~L~l~~n~l~~~---~~p 122 (441)
-+.|+.|+|++| .|. ..+..-+.|+.|+|++|+|. .|...+..-+.|++|+|++|.|... .+-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 456788888875 665 23455678888888888887 2444455667888888888888610 112
Q ss_pred hhhhcCCCCCEEEccCC---CCC-----ccchhhcCCCCCCEEEccCCc
Q psy2947 123 FTLTFCKNLTHLYLDNN---LLD-----ALPGFLLSMPQLDTVYRHGNH 163 (441)
Q Consensus 123 ~~~~~l~~L~~L~l~~n---~l~-----~lp~~~~~l~~L~~L~l~~N~ 163 (441)
..+..-+.|++|+|++| .++ .+-..+..-++|+.|+++.|.
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 23444567888888754 444 233556666788888887665
No 472
>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*
Probab=97.46 E-value=4.5e-05 Score=66.52 Aligned_cols=62 Identities=13% Similarity=0.071 Sum_probs=52.6
Q ss_pred HHHHHHHHhhcC-CCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 334 KEVVDAFKAADT-TKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 334 ~~~~~~f~~~D~-d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
..+..+|..+|. |+||.|+..|+..++..+. ..+.-++.+|+..|.|+||.||.+||...+.
T Consensus 155 ~~v~w~F~~lD~~n~dg~l~~~El~~i~~~l~---~~~~c~~~~~~~cD~n~D~~is~~Ew~~cf~ 217 (229)
T 1nub_A 155 FPVHWQFGQLDQHPIDGYLSHTELAPLRAPLI---PMEHCTTRFFETCDLDNDKYIALDEWAGCFG 217 (229)
T ss_dssp HHHHHHHHHHTTTTCSSEECTTTTGGGGSTTS---TTGGGHHHHHHHHCTTCSSCEEHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHh---hHHHHHHHHHHHcCCCCCCcCCHHHHHHHhC
Confidence 467889999999 8999999999999775442 2345578899999999999999999999875
No 473
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.22 E-value=0.00028 Score=59.91 Aligned_cols=87 Identities=10% Similarity=0.114 Sum_probs=67.6
Q ss_pred cCCCCCCCEEEccCC-CCC-----cCCcCccCCCCCcEEEccCCcCCC---CCCchhhhcCCCCCEEEccCCCCC-----
Q psy2947 77 IFKCDTVEVLSLKSN-SLT-----SLPPDIGRLTNLRVLCLTDNCLQN---ASIPFTLTFCKNLTHLYLDNNLLD----- 142 (441)
Q Consensus 77 ~~~l~~L~~L~l~~n-~l~-----~lp~~~~~l~~L~~L~l~~n~l~~---~~~p~~~~~l~~L~~L~l~~n~l~----- 142 (441)
+.+-+.|+.|+|++| +|. .+-..+..-+.|+.|+|++|.|.. ..+...+..-+.|++|+|++|.|+
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 445678999999985 887 355567778999999999999861 123345566789999999999997
Q ss_pred ccchhhcCCCCCCEEEccCCc
Q psy2947 143 ALPGFLLSMPQLDTVYRHGNH 163 (441)
Q Consensus 143 ~lp~~~~~l~~L~~L~l~~N~ 163 (441)
.|-.++..-+.|+.|+|++|.
T Consensus 117 ala~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHhhCCceeEEECCCCc
Confidence 334667777889999998764
No 474
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.87 E-value=0.00035 Score=58.15 Aligned_cols=82 Identities=13% Similarity=0.147 Sum_probs=60.0
Q ss_pred CcccEEeccCCCcCc----ccCCCCCCCEEEccCCC-CCc-CCcCccCC----CCCcEEEccCCc-CCCCCCchhhhcCC
Q psy2947 61 SHAFLLSLSYTPIGR----RIFKCDTVEVLSLKSNS-LTS-LPPDIGRL----TNLRVLCLTDNC-LQNASIPFTLTFCK 129 (441)
Q Consensus 61 ~~L~~l~l~~n~i~~----~~~~l~~L~~L~l~~n~-l~~-lp~~~~~l----~~L~~L~l~~n~-l~~~~~p~~~~~l~ 129 (441)
..|+.||++++.|.. .+..+++|+.|+|+++. |+. -=..++.+ ++|++|+|++|. ++...+ ..+..++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl-~~L~~~~ 139 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI-IALHHFR 139 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH-HHGGGCT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH-HHHhcCC
Confidence 469999999997763 36789999999999985 772 11224454 379999999985 661111 2467899
Q ss_pred CCCEEEccCCC-CCc
Q psy2947 130 NLTHLYLDNNL-LDA 143 (441)
Q Consensus 130 ~L~~L~l~~n~-l~~ 143 (441)
+|++|+++++. ++.
T Consensus 140 ~L~~L~L~~c~~Itd 154 (176)
T 3e4g_A 140 NLKYLFLSDLPGVKE 154 (176)
T ss_dssp TCCEEEEESCTTCCC
T ss_pred CCCEEECCCCCCCCc
Confidence 99999999884 553
No 475
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.77 E-value=0.0064 Score=57.99 Aligned_cols=100 Identities=13% Similarity=0.312 Sum_probs=65.6
Q ss_pred CCCcccEEeccCC--CcC-cccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCch-hhhcCCCCCE
Q psy2947 59 YFSHAFLLSLSYT--PIG-RRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPF-TLTFCKNLTH 133 (441)
Q Consensus 59 ~l~~L~~l~l~~n--~i~-~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~-~~~~l~~L~~ 133 (441)
+...|+.+.+..+ .|+ ..+.+++.|+.+.+. +.++.++.. |.++.+|+.+.+..+ ++ .++. .|.++.+|+.
T Consensus 263 ~c~~L~~i~lp~~~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~--~I~~~aF~~C~~L~~ 338 (394)
T 4gt6_A 263 SCAYLASVKMPDSVVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT--QILDDAFAGCEQLER 338 (394)
T ss_dssp TCSSCCEEECCTTCCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC--EECTTTTTTCTTCCE
T ss_pred ecccccEEecccccceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc--EehHhHhhCCCCCCE
Confidence 4455666666544 233 334566777777775 456666665 777788888888654 44 4443 5677788888
Q ss_pred EEccCCCCCccc-hhhcCCCCCCEEEccCCc
Q psy2947 134 LYLDNNLLDALP-GFLLSMPQLDTVYRHGNH 163 (441)
Q Consensus 134 L~l~~n~l~~lp-~~~~~l~~L~~L~l~~N~ 163 (441)
+.+.. .+..|. .+|.++++|+.+.+.++.
T Consensus 339 i~ip~-sv~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 339 IAIPS-SVTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp EEECT-TCCBCCGGGGTTCTTCCEEEESSCH
T ss_pred EEECc-ccCEEhHhHhhCCCCCCEEEECCce
Confidence 87754 366775 677778888888877765
No 476
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.66 E-value=0.0044 Score=59.15 Aligned_cols=76 Identities=14% Similarity=0.200 Sum_probs=32.6
Q ss_pred CCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCch-hhhcCCCCCEEEccCCCCCccc-hhhcCCCCCCE
Q psy2947 80 CDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPF-TLTFCKNLTHLYLDNNLLDALP-GFLLSMPQLDT 156 (441)
Q Consensus 80 l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~-~~~~l~~L~~L~l~~n~l~~lp-~~~~~l~~L~~ 156 (441)
+.+|+.+.+..+ ++.++.. |.++++|+.+++..+ ++ .++. .|.++.+|+.+.+..| +..|+ .+|.++++|+.
T Consensus 296 ~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~--~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~ 370 (394)
T 4fs7_A 296 CSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE--EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKK 370 (394)
T ss_dssp CTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC--EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCE
T ss_pred cccccccccccc-cceechhhhcCCCCCCEEEeCCc-cc--EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCE
Confidence 344444444332 3334333 444445555544432 32 2322 3444445555544433 44443 34444445554
Q ss_pred EEcc
Q psy2947 157 VYRH 160 (441)
Q Consensus 157 L~l~ 160 (441)
+.+.
T Consensus 371 i~lp 374 (394)
T 4fs7_A 371 VELP 374 (394)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 4443
No 477
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.46 E-value=0.0083 Score=56.78 Aligned_cols=99 Identities=17% Similarity=0.340 Sum_probs=65.5
Q ss_pred CCcccEEeccCC--CcC-cccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCch-hhhcCCCCCEE
Q psy2947 60 FSHAFLLSLSYT--PIG-RRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPF-TLTFCKNLTHL 134 (441)
Q Consensus 60 l~~L~~l~l~~n--~i~-~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~-~~~~l~~L~~L 134 (441)
..+|+.+.+..+ .++ ..+..+..|+.+.+..+ ++.++.. |..+.+|+.+.+..+ ++ .++. .+.++.+|+.+
T Consensus 216 ~~~l~~i~~~~~~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~--~i~~~aF~~c~~L~~i 291 (379)
T 4h09_A 216 GKNLKKITITSGVTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK--TVPYLLCSGCSNLTKV 291 (379)
T ss_dssp CSSCSEEECCTTCCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS--EECTTTTTTCTTCCEE
T ss_pred ccccceeeeccceeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce--eccccccccccccccc
Confidence 455666666554 333 34456777888877665 5656554 777777888777654 43 4444 45777788888
Q ss_pred EccCCCCCccc-hhhcCCCCCCEEEccCC
Q psy2947 135 YLDNNLLDALP-GFLLSMPQLDTVYRHGN 162 (441)
Q Consensus 135 ~l~~n~l~~lp-~~~~~l~~L~~L~l~~N 162 (441)
.+.++.+..|+ .+|.++.+|+.+.+..+
T Consensus 292 ~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 292 VMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp EECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred cccccccceehhhhhcCCCCCCEEEcCcc
Confidence 88777777776 66777788888877654
No 478
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.01 E-value=0.0097 Score=56.73 Aligned_cols=95 Identities=16% Similarity=0.137 Sum_probs=72.5
Q ss_pred CCCCcccEEeccCC--CcC-cccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCch-hhhcCCCCC
Q psy2947 58 QYFSHAFLLSLSYT--PIG-RRIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPF-TLTFCKNLT 132 (441)
Q Consensus 58 ~~l~~L~~l~l~~n--~i~-~~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~-~~~~l~~L~ 132 (441)
....+|+.+.+..+ .|+ ..+..+++|+.++|..+ ++.|+.. |.++++|+.+.+..| ++ .++. .|.++.+|+
T Consensus 294 ~~~~~L~~i~l~~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~--~I~~~aF~~C~~L~ 369 (394)
T 4fs7_A 294 YGCSSLTEVKLLDSVKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR--KIGANAFQGCINLK 369 (394)
T ss_dssp TTCTTCCEEEECTTCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC--EECTTTBTTCTTCC
T ss_pred cccccccccccccccceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc--EehHHHhhCCCCCC
Confidence 34567777777665 454 34667899999999754 8888766 999999999999877 65 5654 678999999
Q ss_pred EEEccCCCCCccchhhcCCCCCCEE
Q psy2947 133 HLYLDNNLLDALPGFLLSMPQLDTV 157 (441)
Q Consensus 133 ~L~l~~n~l~~lp~~~~~l~~L~~L 157 (441)
.+++..+ +..+...|.++++|+.+
T Consensus 370 ~i~lp~~-~~~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 370 KVELPKR-LEQYRYDFEDTTKFKWI 393 (394)
T ss_dssp EEEEEGG-GGGGGGGBCTTCEEEEE
T ss_pred EEEECCC-CEEhhheecCCCCCcEE
Confidence 9999754 55566678888888765
No 479
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.44 E-value=0.031 Score=53.19 Aligned_cols=101 Identities=10% Similarity=0.152 Sum_probs=70.5
Q ss_pred CCCCCcccEEeccCC--CcCc-ccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCch-hhhcCCCC
Q psy2947 57 PQYFSHAFLLSLSYT--PIGR-RIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPF-TLTFCKNL 131 (441)
Q Consensus 57 ~~~l~~L~~l~l~~n--~i~~-~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~-~~~~l~~L 131 (441)
+.+...|+.+.+..+ .|+. .+..+.+|+.+.|..+ ++.|+.. |.++.+|+.+.+..+ ++ .++. .|.++.+|
T Consensus 284 F~~c~~L~~i~l~~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~--~I~~~aF~~C~~L 359 (394)
T 4gt6_A 284 FMNCPALQDIEFSSRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT--KIPESAFSNCTAL 359 (394)
T ss_dssp TTTCTTCCEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC--BCCGGGGTTCTTC
T ss_pred cccccccccccCCCcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC--EEhHhHhhCCCCC
Confidence 445678888888765 5664 4667899999999864 7777766 999999999999765 55 5654 67999999
Q ss_pred CEEEccCCCCCccchhhcCCCCCCEEEccCCc
Q psy2947 132 THLYLDNNLLDALPGFLLSMPQLDTVYRHGNH 163 (441)
Q Consensus 132 ~~L~l~~n~l~~lp~~~~~l~~L~~L~l~~N~ 163 (441)
+.+++.++... + ..+..+.+|+.+.+..|.
T Consensus 360 ~~i~~~~~~~~-~-~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 360 NNIEYSGSRSQ-W-NAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp CEEEESSCHHH-H-HTCBCCCCC---------
T ss_pred CEEEECCceee-h-hhhhccCCCCEEEeCCCC
Confidence 99999887432 1 456677888888877665
No 480
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.39 E-value=0.075 Score=50.08 Aligned_cols=85 Identities=16% Similarity=0.192 Sum_probs=55.3
Q ss_pred ccCCCCCCCEEEccCCCCCcCCcC-ccCCCCCcEEEccCCcCCCCCCch-hhhcCCCCCEEEccCCCCCccc-hhhcCCC
Q psy2947 76 RIFKCDTVEVLSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPF-TLTFCKNLTHLYLDNNLLDALP-GFLLSMP 152 (441)
Q Consensus 76 ~~~~l~~L~~L~l~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~p~-~~~~l~~L~~L~l~~n~l~~lp-~~~~~l~ 152 (441)
.+..+.+|+.+.+..+ +..++.. +..+..|+.+.+..+ ++ .++. .+.++.+|+.+.+.. .+..++ ..|.+++
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~--~I~~~aF~~~~~l~~i~l~~-~i~~i~~~aF~~c~ 286 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT--SIGSFLLQNCTALKTLNFYA-KVKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC--EECTTTTTTCTTCCEEEECC-CCSEECTTTTTTCT
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc--EeCccccceeehhccccccc-cceecccccccccc
Confidence 3445667777777544 4444444 777778888887765 43 4443 456777788877753 466666 5677778
Q ss_pred CCCEEEccCCcCc
Q psy2947 153 QLDTVYRHGNHNY 165 (441)
Q Consensus 153 ~L~~L~l~~N~~~ 165 (441)
+|+.+.+.++.+.
T Consensus 287 ~L~~i~l~~~~i~ 299 (379)
T 4h09_A 287 NLTKVVMDNSAIE 299 (379)
T ss_dssp TCCEEEECCTTCC
T ss_pred ccccccccccccc
Confidence 8888888776653
No 481
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=95.32 E-value=0.051 Score=54.09 Aligned_cols=61 Identities=15% Similarity=0.228 Sum_probs=55.6
Q ss_pred hHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q psy2947 370 PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIA 433 (441)
Q Consensus 370 ~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l 433 (441)
......+|...|. .+|+|+-++.+.+|.+-| ++.+.+..+....|.|+||.++.+||+-+|
T Consensus 457 ~~~y~~~F~~~~~-~~g~i~g~~a~~~~~~s~--Lp~~~L~~IW~l~D~~~~g~L~~~eF~~am 517 (550)
T 2qpt_A 457 KSKYDEIFYNLAP-ADGKLSGSKAKTWMVGTK--LPNSVLGRIWKLSDVDRDGMLDDEEFALAS 517 (550)
T ss_dssp HHHHHHHHHHTCC-SSSEECHHHHHHHHHHTT--CCHHHHHHHHHHHCSSCSSSEEHHHHHHHH
T ss_pred HHHHHHHHHhcCC-CCCeecHHHHHHHHHHcC--CCHHHHHHHhcccCCCCCCcCCHHHHHHHH
Confidence 4577889999995 469999999999998877 899999999999999999999999999877
No 482
>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11
Probab=94.26 E-value=0.28 Score=37.57 Aligned_cols=48 Identities=13% Similarity=0.239 Sum_probs=28.3
Q ss_pred CCcccHHHHHHHHHHhC----CCCCHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q psy2947 385 SGTVPAKYLKHVLVNWG----EGLSSKEVDQIFREANVTMNSKVRYEDFVKIA 433 (441)
Q Consensus 385 ~G~is~~ef~~~l~~~~----~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l 433 (441)
...|+-..|..+++..+ ..++.-+++-+|.++ ..+..+|+|++|+.+|
T Consensus 39 ~~~M~~k~f~K~~kD~~lidgk~iT~TdvDIiF~Kv-~k~~r~I~f~qF~~aL 90 (125)
T 1pul_A 39 ATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKV-TGPKKKATFDETKKVL 90 (125)
T ss_dssp SSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHH-TCSSSCCCHHHHHHHH
T ss_pred cccCcHHHHHHHHHHCCCCCCCCCCccccceeehcc-cCCcceecHHHHHHHH
Confidence 35566666666666532 345566666666666 4445556666666655
No 483
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=93.28 E-value=0.46 Score=37.73 Aligned_cols=77 Identities=12% Similarity=0.082 Sum_probs=52.2
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhC-CCCCHHHHHHH
Q psy2947 334 KEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWG-EGLSSKEVDQI 412 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~-~~l~~~~~~~l 412 (441)
+.++.+|+.+|.|.||.|+..|=..+++.........+ -.. .++ .+|..||.+|+-+.++.-. ...+.+++...
T Consensus 15 eAi~~~H~~lDdD~dG~Id~~Es~~Flre~~~~~d~~~-k~~---~~h-~~D~~Isv~eLw~~W~~s~V~nWTvedV~~W 89 (150)
T 2l5y_A 15 EALQTIHKQMDDDKDGGIEVEESDEFIREDMKYKDATN-KHS---HLH-REDKHITIEDLWKRWKTSEVHNWTLEDTLQW 89 (150)
T ss_dssp HHHHHHHHHHSSSCSSCBCHHHHHHHHHHHTTTTCSHH-HHH---HHT-TTCCCBCHHHHHHHHHTSHHHHCCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCcHHHHHHHHHHHhcccCchh-HHh---hhc-CCCCeeeHHHHHHHHccCcchhCCHHHHHHH
Confidence 45778899999999999999999999987644333222 122 333 3578999999988886421 12555665554
Q ss_pred HHH
Q psy2947 413 FRE 415 (441)
Q Consensus 413 ~~~ 415 (441)
+..
T Consensus 90 L~~ 92 (150)
T 2l5y_A 90 LIE 92 (150)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 484
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A
Probab=93.24 E-value=0.068 Score=41.43 Aligned_cols=76 Identities=12% Similarity=0.093 Sum_probs=53.0
Q ss_pred CCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCC---HHHHHHHHHHhCC--C
Q psy2947 345 TTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLS---SKEVDQIFREANV--T 419 (441)
Q Consensus 345 ~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~---~~~~~~l~~~~d~--d 419 (441)
.+.+..|+.++|. .+.++|..||++++|+|.+.+|..++..+..++. .... .+..+|. .
T Consensus 31 ~~~~~~l~~~dl~--------------~F~~~W~~fDP~aTg~I~~~~L~~ll~~L~pPLgi~kpnr~--~L~~mniPl~ 94 (129)
T 2kav_A 31 EESAEPLSEDDFE--------------MFYEVWEKFDPDATQFIEFAKLSDFADALDPPLLIAKPNKV--QLIAMDLPMV 94 (129)
T ss_dssp SSCSCSSCHHHHH--------------HHHHHHHHHCTTCCCEECGGGHHHHHHHSCTTSCCCTTCCH--HHHHTCCCEE
T ss_pred HhhccCCCHHHHH--------------HHHHHHHhcCCCCceEEeHHHHHHHHHhCCccccCCCccHH--HHHHcCCccC
Confidence 4444556666654 3456899999999999999999999998764431 1111 2336664 2
Q ss_pred CCCceeHHHHHHHHhcc
Q psy2947 420 MNSKVRYEDFVKIACAP 436 (441)
Q Consensus 420 ~dg~i~~~ef~~~l~~~ 436 (441)
.+++|-|-+.+.++.+.
T Consensus 95 ~g~~Vhf~dvL~ALtr~ 111 (129)
T 2kav_A 95 SGDRIHCLDILFAFTKR 111 (129)
T ss_dssp TTTEEEHHHHHHHHHHH
T ss_pred CCCEEeHHHHHHHHHHH
Confidence 45689999998888765
No 485
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=92.88 E-value=0.27 Score=48.78 Aligned_cols=63 Identities=14% Similarity=0.054 Sum_probs=53.9
Q ss_pred CHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 332 IPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 332 ~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
.......+|...|.. +|.|+-++-+.++..- ....+.+..+|...|.+++|.++.+||.-+|.
T Consensus 456 ~~~~y~~~F~~~~~~-~g~i~g~~a~~~~~~s---~Lp~~~L~~IW~l~D~~~~g~L~~~eF~~am~ 518 (550)
T 2qpt_A 456 DKSKYDEIFYNLAPA-DGKLSGSKAKTWMVGT---KLPNSVLGRIWKLSDVDRDGMLDDEEFALASH 518 (550)
T ss_dssp THHHHHHHHHHTCCS-SSEECHHHHHHHHHHT---TCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCC-CCeecHHHHHHHHHHc---CCCHHHHHHHhcccCCCCCCcCCHHHHHHHHH
Confidence 457789999999954 6999999988887643 45578899999999999999999999998886
No 486
>2jrf_A Tubulin polymerization-promoting protein family member 3; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=92.36 E-value=0.51 Score=38.83 Aligned_cols=67 Identities=9% Similarity=0.108 Sum_probs=35.9
Q ss_pred HHHHHHHHhhcCCCCC-----cccHHHHHHHHHhhc--c-CCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 334 KEVVDAFKAADTTKSG-----KLSFPDFLKVMHTHS--K-AEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~g-----~i~~~ef~~~~~~~~--~-~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
..+..+|..|-.-+++ .++-..|..+++... . .......+..+|..+-..+...|++++|.++|..+
T Consensus 8 ~~L~~~F~~F~~fG~~~~~~~eMd~~~F~KlcKD~~liDgk~~T~tdvDIiF~KvK~k~~rkI~feqF~~aL~~l 82 (184)
T 2jrf_A 8 AGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGKSARVINYEEFKKALEEL 82 (184)
T ss_dssp SHHHHHHHHHHSSSCTTSTTSEEEHHHHHHHHHHTTCCCSSSSCHHHHHHHHHHHCCSCCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCccccCcHHHHHHHHHHcCCccCCCCChhhcchhhheeccCcceeecHHHHHHHHHHH
Confidence 3455555555554443 456666666665432 1 23334556666666654555666666666666443
No 487
>1wlm_A Protein CGI-38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.39.1.11
Probab=92.06 E-value=0.55 Score=37.41 Aligned_cols=66 Identities=9% Similarity=0.124 Sum_probs=37.8
Q ss_pred HHHHHHHHhhcCCCC-----CcccHHHHHHHHHhhc--c-CCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 334 KEVVDAFKAADTTKS-----GKLSFPDFLKVMHTHS--K-AEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 334 ~~~~~~f~~~D~d~~-----g~i~~~ef~~~~~~~~--~-~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
..+..+|..|-.-|+ ..++-..|..+++... . .......+..+|..+-..+...|++++|.++|..
T Consensus 15 ~~L~~~F~~F~~fG~~~~~~~~M~~~~f~Kl~kD~~lidgk~~T~tdvDiiF~KvK~k~~rkI~f~qF~~aL~~ 88 (151)
T 1wlm_A 15 AGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEE 88 (151)
T ss_dssp CSHHHHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCCSSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCCcccccCCHHHHHHHHHHCCCCcCCCCChhhcceehheeccCccceecHHHHHHHHHH
Confidence 346666666655433 2466666666666432 1 2333456666666665555666777777666654
No 488
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}
Probab=91.39 E-value=0.18 Score=40.01 Aligned_cols=74 Identities=14% Similarity=0.102 Sum_probs=49.6
Q ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhC-CCCCHHHHHH
Q psy2947 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWG-EGLSSKEVDQ 411 (441)
Q Consensus 333 ~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~-~~l~~~~~~~ 411 (441)
.+.++.+|+.+|.|.||.|+..|=..+++........... ...| .. +|..||.+|+-+.++.-. ...+.+++..
T Consensus 14 ~eAi~~lH~~lDdD~dG~Id~~Es~~flredl~~~d~~~~-~~~f---h~-~D~~Isv~eLw~~W~~s~V~nWTvedV~~ 88 (150)
T 2k60_A 14 FEAVRNIHKLMDDDANGDVDVEESDEFLREDLNYHDPTVK-HSTF---HG-EDKLISVEDLWKAWKSSEVYNWTVDEVVQ 88 (150)
T ss_dssp HHHHHHHHHTTCTTCSSEECTTTTTTHHHHHTTSSCTHHH-HHHH---TS-SSCCEEHHHHHHHHHHSHHHHCCHHHHHH
T ss_pred hHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhccccchhh-hhcc---cC-CCCeeeHHHHHHHhccCccccCCHHHHHH
Confidence 4667888899999999999999888888765433332222 3344 32 678999999988876421 1244455443
No 489
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=90.94 E-value=1.1 Score=35.48 Aligned_cols=58 Identities=12% Similarity=0.087 Sum_probs=42.1
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q psy2947 371 KEVVDAFKAADTTKSGTVPAKYLKHVLVNW-GEGLSSKEVDQIFREANVTMNSKVRYEDFVKIA 433 (441)
Q Consensus 371 ~~~~~~f~~~D~~~~G~is~~ef~~~l~~~-~~~l~~~~~~~l~~~~d~d~dg~i~~~ef~~~l 433 (441)
+.++.+++.+|.|+||.|+.+|-..++++. +..-.. +-. ..++ .+|..||.+|+...-
T Consensus 15 eAi~~~H~~lDdD~dG~Id~~Es~~Flre~~~~~d~~-~k~---~~~h-~~D~~Isv~eLw~~W 73 (150)
T 2l5y_A 15 EALQTIHKQMDDDKDGGIEVEESDEFIREDMKYKDAT-NKH---SHLH-REDKHITIEDLWKRW 73 (150)
T ss_dssp HHHHHHHHHHSSSCSSCBCHHHHHHHHHHHTTTTCSH-HHH---HHHT-TTCCCBCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCcHHHHHHHHHHHhcccCch-hHH---hhhc-CCCCeeeHHHHHHHH
Confidence 567889999999999999999999999984 322122 222 2333 347889999987644
No 490
>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11
Probab=89.95 E-value=2.7 Score=32.08 Aligned_cols=68 Identities=15% Similarity=0.045 Sum_probs=48.3
Q ss_pred HHHHHHHHHhhcCC---CCCcccHHHHHHHHHhhc--c-CCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhC
Q psy2947 333 PKEVVDAFKAADTT---KSGKLSFPDFLKVMHTHS--K-AEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWG 401 (441)
Q Consensus 333 ~~~~~~~f~~~D~d---~~g~i~~~ef~~~~~~~~--~-~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~ 401 (441)
...+..+|..|-.- +...|+-..|...++... . ...+..++..+|..+ ..+...|++++|..+|..+.
T Consensus 21 ~~~L~~~F~~Fa~fG~~~~~~M~~k~f~K~~kD~~lidgk~iT~TdvDIiF~Kv-~k~~r~I~f~qF~~aL~~lA 94 (125)
T 1pul_A 21 DADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKV-TGPKKKATFDETKKVLAFVA 94 (125)
T ss_dssp HHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHH-TCSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCccccCcHHHHHHHHHHCCCCCCCCCCccccceeehcc-cCCcceecHHHHHHHHHHHH
Confidence 34455555554332 336788888888887643 2 445567888999999 77788999999999998753
No 491
>4fl4_A Glycoside hydrolase family 9; structural genomics, montreal-kingston bacterial structural initiative, BSGI, dockerin; 2.80A {Clostridium thermocellum} PDB: 3p0d_A
Probab=89.17 E-value=0.61 Score=33.37 Aligned_cols=55 Identities=22% Similarity=0.178 Sum_probs=31.4
Q ss_pred cCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 344 DTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 344 D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
|.|+||.|+..++..+.+-+........ -..-....|.|+||.|+..++..+-+-
T Consensus 24 DvNgDG~Vn~~D~~llk~yllg~~~~~~-~~~~~~aADvNgDG~In~~D~~~lkky 78 (88)
T 4fl4_A 24 DVNDDGKVNSTDLTLLKRYVLKAVSTLP-SSKAEKNADVNRDGRVNSSDVTILSRY 78 (88)
T ss_dssp CTTCSSCCSHHHHHHHHHHHHTSSCCCS-SHHHHHHHCTTCSSCCSHHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHHcCCCCCCc-hhhhhhhccccCCCCcCHHHHHHHHHH
Confidence 6777777777777665554432211100 012345677777787777777655443
No 492
>4fl4_A Glycoside hydrolase family 9; structural genomics, montreal-kingston bacterial structural initiative, BSGI, dockerin; 2.80A {Clostridium thermocellum} PDB: 3p0d_A
Probab=89.07 E-value=0.34 Score=34.66 Aligned_cols=52 Identities=15% Similarity=0.157 Sum_probs=36.2
Q ss_pred HHhCCCCCCcccHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCCCCCCceeHHHHHH
Q psy2947 378 KAADTTKSGTVPAKYLKHVLVNW-GE-GLSSKEVDQIFREANVTMNSKVRYEDFVK 431 (441)
Q Consensus 378 ~~~D~~~~G~is~~ef~~~l~~~-~~-~l~~~~~~~l~~~~d~d~dg~i~~~ef~~ 431 (441)
..=|.|+||.|+..++..+.+-+ |. ..... +.-+...|.|+||.|+-.++..
T Consensus 21 ~~GDvNgDG~Vn~~D~~llk~yllg~~~~~~~--~~~~~aADvNgDG~In~~D~~~ 74 (88)
T 4fl4_A 21 HMGDVNDDGKVNSTDLTLLKRYVLKAVSTLPS--SKAEKNADVNRDGRVNSSDVTI 74 (88)
T ss_dssp CTTCTTCSSCCSHHHHHHHHHHHHTSSCCCSS--HHHHHHHCTTCSSCCSHHHHHH
T ss_pred ccccCCCCCcCCHHHHHHHHHHHcCCCCCCch--hhhhhhccccCCCCcCHHHHHH
Confidence 34589999999999998877764 32 12111 1124578999999999888753
No 493
>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria}
Probab=89.07 E-value=4.1 Score=34.14 Aligned_cols=100 Identities=7% Similarity=0.077 Sum_probs=60.4
Q ss_pred CHHHHHHHHHhhcCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHH
Q psy2947 332 IPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQ 411 (441)
Q Consensus 332 ~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~~~ 411 (441)
...++.++|..|-...+..|+.+-..+++..+.-..... .+-.+-..+....-|.+|.+||.+.|..+|.. +-+.++.
T Consensus 5 ~~~~l~~lF~~Y~d~~~~~I~~dG~~~~~~DLgv~ped~-~~LvLaw~l~a~~~g~ftr~ef~~G~~~l~~d-si~~lk~ 82 (199)
T 3kev_A 5 DKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDV-VTLVLAWKLKASSTCEFSEKEFVEGLANLQVD-SLEKLKR 82 (199)
T ss_dssp CHHHHHHHHHHHCCTTSSEECHHHHHHHHHHTTCCTTSH-HHHHHHHHTTCCSTTCEEHHHHHHHHHHTTCC-SHHHHHH
T ss_pred CHHHHHHHHHHhcCCCcCccCHHHHHHHHHHcCCChhhH-HHHHHHHHcCCCccCcccHHHHHHHHHHhCCC-CHHHHHH
Confidence 456677777777533334899999999988875544332 33333444666778999999999999998854 3333444
Q ss_pred HHHHhCCCCCCceeHHHHHHHH
Q psy2947 412 IFREANVTMNSKVRYEDFVKIA 433 (441)
Q Consensus 412 l~~~~d~d~dg~i~~~ef~~~l 433 (441)
.+..+...-...-.|.+|.++.
T Consensus 83 ~l~~l~~~l~d~~~Fk~~Y~ft 104 (199)
T 3kev_A 83 KLSSLRKEIEDPSKFRAFYQFV 104 (199)
T ss_dssp HHHHHHHHTTSHHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHH
Confidence 3333322222233455554443
No 494
>2ccl_B Endo-1,4-beta-xylanase Y; cell adhesion, cohesin/dockerin complex, cellulosome, cohesi dockerin, scaffolding, cellulose degradation; 2.03A {Clostridium thermocellum} SCOP: a.139.1.1 PDB: 1ohz_B
Probab=88.91 E-value=1.8 Score=28.73 Aligned_cols=53 Identities=21% Similarity=0.220 Sum_probs=30.8
Q ss_pred cCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 344 DTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 344 D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
|.|++|.|+..+|..+-+.+....... ..-+...|.++||.|+..+|..+-+.
T Consensus 6 DvN~DG~vn~~D~~~l~~yllg~~~~~---~~~~~~aDvn~DG~in~~D~~~l~~~ 58 (63)
T 2ccl_B 6 DVNGDGTINSTDLTMLKRSVLRAITLT---DDAKARADVDKNGSINAADVLLLSRY 58 (63)
T ss_dssp CTTCSSSCCHHHHHHHHHHHTTSSCCC---HHHHHHHCTTCSSCCSHHHHHHHHHH
T ss_pred ccCCCCcCCHHHHHHHHHHHcCCCccc---cchhhhhccCCCCCccHHHHHHHHHH
Confidence 667777777777755544332222111 12245667777777777777655543
No 495
>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A 4gao_A*
Probab=88.87 E-value=2 Score=36.07 Aligned_cols=101 Identities=9% Similarity=0.107 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHhh-cCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHH
Q psy2947 331 DIPKEVVDAFKAA-DTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 409 (441)
Q Consensus 331 ~~~~~~~~~f~~~-D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l~~~~~ 409 (441)
.+..++.++|..| |.++...|..+-..+++..+ +-....-.+-.+-..+....-|.+|.+||.+.|.++|. -+-+.+
T Consensus 1 ~~~~~l~~lF~~Y~d~~~~d~I~~dG~~~~~~DL-gv~ped~~~Lvlaw~l~a~~~g~ftr~ef~~G~~~l~~-dsi~~l 78 (200)
T 3tdu_A 1 GSRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDL-ALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGC-DSIEKL 78 (200)
T ss_dssp CCHHHHHHHHHHHEETTEEEEECHHHHHHHHHHH-TCCTTSHHHHHHHHHTTCSSTTCEEHHHHHHHHHHHTC-SSHHHH
T ss_pred CCHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc-CCChhhHHHHHHHHHcCCCccCccCHHHHHHHHHHHcc-ccHHHH
Q ss_pred HHHHHHhCCCCCCceeHHHHHHHH
Q psy2947 410 DQIFREANVTMNSKVRYEDFVKIA 433 (441)
Q Consensus 410 ~~l~~~~d~d~dg~i~~~ef~~~l 433 (441)
+..+..+...-...-.|.+|.++.
T Consensus 79 k~~l~~l~~~l~d~~~Fk~~Y~ft 102 (200)
T 3tdu_A 79 KAQIPKMEQELKEPGRFKDFYQFT 102 (200)
T ss_dssp HHTHHHHHHHTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHH
No 496
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=88.36 E-value=0.47 Score=38.53 Aligned_cols=61 Identities=8% Similarity=0.086 Sum_probs=41.5
Q ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCC----CHHHHHHHHHHhCC--CCCCceeHHHHHHHHhc
Q psy2947 372 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGL----SSKEVDQIFREANV--TMNSKVRYEDFVKIACA 435 (441)
Q Consensus 372 ~~~~~f~~~D~~~~G~is~~ef~~~l~~~~~~l----~~~~~~~l~~~~d~--d~dg~i~~~ef~~~l~~ 435 (441)
.+..+|..||++++|+|.+.++..++..+..++ +.. ..+..+|. ..+|+|-|-+.+.+|.+
T Consensus 21 ~F~~~W~~fDP~ATgfI~~~~L~~~l~~L~pPLg~~kPn~---~~L~~mdiPl~~~~~Vhf~dvL~ALtk 87 (168)
T 4dck_A 21 MFYEIWEKFDPEATQFIEYSVLSDFADALSEPLRIAKPNQ---ISLINMDLPMVSGDRIHCMDILFAFTK 87 (168)
T ss_dssp HHHHHHHHHCTTCCSEEEGGGHHHHHHHSCTTTCCCSSCH---HHHHHSCCEEETTTEEEHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcceeeHHHHHHHHHhcCCCCcCCCCCH---HHHHHcCCCcCCCCEEeHHHHHHHHHH
Confidence 344578888888888888888888888765443 221 12455663 45678888887777654
No 497
>3ul4_B Cellulosome enzyme, dockerin type I; cohesin, type I cohesin-dockerin COMP protein-protein interaction, cell adhesion; HET: PEG; 1.95A {Clostridium thermocellum}
Probab=87.81 E-value=1 Score=30.20 Aligned_cols=51 Identities=18% Similarity=0.264 Sum_probs=32.4
Q ss_pred cCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q psy2947 344 DTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLV 398 (441)
Q Consensus 344 D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~ 398 (441)
|.|+||.|+..++..+.+.+........ . ....|.++||.|+..++..+-+
T Consensus 7 DvN~DG~Vn~~D~~llk~yllg~~~~~~---~-~~~ADvn~DG~In~~D~~~lk~ 57 (65)
T 3ul4_B 7 DLNRNGIVNDEDYILLKNYLLRGNKLVI---D-LNVADVNKDGKVNSTDCLFLKK 57 (65)
T ss_dssp CTTCSSCCSHHHHHHHHHHHTTCSSCCC---C-GGGCCTTCSSCCSHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHHCCCCCCch---H-HHhccccCCCCCCHHHHHHHHH
Confidence 6678888888887766655543221111 1 4567888888888887765544
No 498
>4dh2_B Dockerin type 1; cellulosome, cohesin, type I cohesin-dockerin, Pro protein interaction, cell adhesion; 1.75A {Clostridium thermocellum}
Probab=87.67 E-value=0.33 Score=34.36 Aligned_cols=55 Identities=9% Similarity=0.032 Sum_probs=32.0
Q ss_pred cCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 344 DTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 344 D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
|.|+||.|+..++..+.+.+.+..... ....-....|.|+||.|+..++..+-+.
T Consensus 9 DvN~DG~Vn~~D~~llk~yllg~~~~~-~~~~~~~~ADvngDG~In~~D~~~lk~y 63 (82)
T 4dh2_B 9 DVNADGVVNISDYVLMKRYILRIIADF-PADDDMWVGDVNGDNVINDIDCNYLKRY 63 (82)
T ss_dssp CTTCSSSCSHHHHHHHHHHHTTSSSSC-SSSCHHHHHCSSSSSCCSHHHHHHHHHH
T ss_pred ccCCCCcCCHHHHHHHHHHHcCCCccC-ccccchhheeccCCCcCCHHHHHHHHHH
Confidence 677777777777776665553322110 0012345667777777777777655444
No 499
>2y3n_B Cellulosomal family-48 processive glycoside hydro; structrual protein-hydrolase complex, cellulosome; 1.90A {Bacteroides cellulosolvens}
Probab=87.47 E-value=0.95 Score=30.97 Aligned_cols=52 Identities=13% Similarity=0.215 Sum_probs=33.7
Q ss_pred cCCCCCcccHHHHHHHHHhhc-cCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy2947 344 DTTKSGKLSFPDFLKVMHTHS-KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNW 400 (441)
Q Consensus 344 D~d~~g~i~~~ef~~~~~~~~-~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~~ 400 (441)
|.|+||.|+..++..+-+.+. .+... ... ...|.++||.|+..++..+-+.+
T Consensus 8 DvN~DG~vn~~D~~~l~~yl~~lg~~~--~~~---~~aDvN~DG~in~~D~~~l~~~l 60 (71)
T 2y3n_B 8 DLNGDGVINMADVMILAQSFGKAIGNP--GVN---EKADLNNDGVINSDDAIILAQYF 60 (71)
T ss_dssp CTTSSSBCSHHHHHHHHHTTTCBC-----------CTTCTTCSSBCSHHHHHHHHHHT
T ss_pred cCCCCCcCCHHHHHHHHHHHHHhCCCc--CCC---ccccccCCCcccHHHHHHHHHHH
Confidence 678888888888876654441 11111 111 67788999999988887776654
No 500
>2vn6_B Endoglucanase A; cell adhesion, carbohydrate metabolism, polysaccharide degradation, hydrolase, glycosidase, cellulose degradation; 1.49A {Clostridium cellulolyticum} PDB: 2vn5_B
Probab=87.47 E-value=1.5 Score=29.26 Aligned_cols=50 Identities=20% Similarity=0.125 Sum_probs=31.1
Q ss_pred cCCCCCcccHHHHHHHHHhhccCCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy2947 344 DTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVN 399 (441)
Q Consensus 344 D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~f~~~D~~~~G~is~~ef~~~l~~ 399 (441)
|.|++|.|+..+|..+-+.+........ ...|.++||.|+..+|..+-+.
T Consensus 6 DvN~DG~vn~~D~~~l~~yllg~~~~~~------~~aDvn~DG~in~~D~~~l~~~ 55 (64)
T 2vn6_B 6 DYNNDGNVDSTDFAGLKKYIMAADHAYV------KNLDVNLDNEVNAFDLAILKKY 55 (64)
T ss_dssp CTTSSSCCSHHHHHHHHHHHHSTTCCCC------GGGCTTCSSCCSHHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHHccCCccch------hhhcccCCCcccHHHHHHHHHH
Confidence 6678888887777655443322221111 5678888888888887666554
Done!