BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2951
(1466 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3LB8|A Chain A, Crystal Structure Of The Covalent Putidaredoxin Reductase-
Putidaredoxin Complex
pdb|3LB8|B Chain B, Crystal Structure Of The Covalent Putidaredoxin Reductase-
Putidaredoxin Complex
Length = 436
Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 184/378 (48%), Gaps = 14/378 (3%)
Query: 44 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQL---DIKADSILL 100
D ++VG G +G LR +G+ G + + D +P+ LSK A+S+ L
Sbjct: 4 DNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYL 63
Query: 101 RTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGV 160
RT + Y +I ++ G ++ + + + +++ L DG ++D+ ++ LATG PR + A G
Sbjct: 64 RTPDAYAAQNIQLLGGTQVTAINR-DRQQVILSDGRALDYDRLVLATGGRPRPLPVASGA 122
Query: 161 ----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 216
N YLRT+EDA I + ++ +VVIG +IG+E AA VT++ A
Sbjct: 123 VGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAAR 182
Query: 217 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFE-KNEKNDVTAANLDNGTTIPADLVI 275
+ V L GV V FE ++ VTA ++GT +PADLVI
Sbjct: 183 VLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVI 242
Query: 276 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHS-FYNKNASI 334
GIG + N G++++ +V+NE+++T+ P + A GD A HS Y++ I
Sbjct: 243 AGIGLIPNCELASAAGLQVD--NGIVINEHMQTSDPLIMAVGDCAR--FHSQLYDRWVRI 298
Query: 335 GHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEAL 394
A R A + K P+FW+ + +G + G + G+ ++ + G L
Sbjct: 299 ESVPNALEQARKIAAILCGKVPRDEAAPWFWSDQYEIGLKMVGLSEGYDRIIVRGSLAQP 358
Query: 395 KFTAYYSNADKVLAILTV 412
F+ +Y D+VLA+ TV
Sbjct: 359 DFSVFYLQGDRVLAVDTV 376
Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 184/378 (48%), Gaps = 14/378 (3%)
Query: 596 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQL---DIKADSILL 652
D ++VG G +G LR +G+ G + + D +P+ LSK A+S+ L
Sbjct: 4 DNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYL 63
Query: 653 RTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGV 712
RT + Y +I ++ G ++ + + + +++ L DG ++D+ ++ LATG PR + A G
Sbjct: 64 RTPDAYAAQNIQLLGGTQVTAINR-DRQQVILSDGRALDYDRLVLATGGRPRPLPVASGA 122
Query: 713 ----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 768
N YLRT+EDA I + ++ +VVIG +IG+E AA VT++ A
Sbjct: 123 VGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAAR 182
Query: 769 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFE-KNEKNDVTAANLDNGTTIPADLVI 827
+ V L GV V FE ++ VTA ++GT +PADLVI
Sbjct: 183 VLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVI 242
Query: 828 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHS-FYNKNASI 886
GIG + N G++++ +V+NE+++T+ P + A GD A HS Y++ I
Sbjct: 243 AGIGLIPNCELASAAGLQVD--NGIVINEHMQTSDPLIMAVGDCAR--FHSQLYDRWVRI 298
Query: 887 GHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEAL 946
A R A + K P+FW+ + +G + G + G+ ++ + G L
Sbjct: 299 ESVPNALEQARKIAAILCGKVPRDEAAPWFWSDQYEIGLKMVGLSEGYDRIIVRGSLAQP 358
Query: 947 KFTAYYSNADKVLAILTV 964
F+ +Y D+VLA+ TV
Sbjct: 359 DFSVFYLQGDRVLAVDTV 376
Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 184/378 (48%), Gaps = 14/378 (3%)
Query: 1067 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQL---DIKADSILL 1123
D ++VG G +G LR +G+ G + + D +P+ LSK A+S+ L
Sbjct: 4 DNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYL 63
Query: 1124 RTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGV 1183
RT + Y +I ++ G ++ + + + +++ L DG ++D+ ++ LATG PR + A G
Sbjct: 64 RTPDAYAAQNIQLLGGTQVTAINR-DRQQVILSDGRALDYDRLVLATGGRPRPLPVASGA 122
Query: 1184 ----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 1239
N YLRT+EDA I + ++ +VVIG +IG+E AA VT++ A
Sbjct: 123 VGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAAR 182
Query: 1240 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFE-KNEKNDVTAANLDNGTTIPADLVI 1298
+ V L GV V FE ++ VTA ++GT +PADLVI
Sbjct: 183 VLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVI 242
Query: 1299 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHS-FYNKNASI 1357
GIG + N G++++ +V+NE+++T+ P + A GD A HS Y++ I
Sbjct: 243 AGIGLIPNCELASAAGLQVD--NGIVINEHMQTSDPLIMAVGDCAR--FHSQLYDRWVRI 298
Query: 1358 GHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEAL 1417
A R A + K P+FW+ + +G + G + G+ ++ + G L
Sbjct: 299 ESVPNALEQARKIAAILCGKVPRDEAAPWFWSDQYEIGLKMVGLSEGYDRIIVRGSLAQP 358
Query: 1418 KFTAYYSNADKVLAILTV 1435
F+ +Y D+VLA+ TV
Sbjct: 359 DFSVFYLQGDRVLAVDTV 376
>pdb|1Q1R|A Chain A, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1R|B Chain B, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1W|A Chain A, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1W|B Chain B, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
Length = 431
Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 184/378 (48%), Gaps = 14/378 (3%)
Query: 44 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQL---DIKADSILL 100
D ++VG G +G LR +G+ G + + D +P+ LSK A+S+ L
Sbjct: 5 DNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYL 64
Query: 101 RTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGV 160
RT + Y +I ++ G ++ + + + +++ L DG ++D+ ++ LATG PR + A G
Sbjct: 65 RTPDAYAAQNIQLLGGTQVTAINR-DRQQVILSDGRALDYDRLVLATGGRPRPLPVASGA 123
Query: 161 ----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 216
N YLRT+EDA I + ++ +VVIG +IG+E AA VT++ A
Sbjct: 124 VGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAAR 183
Query: 217 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFE-KNEKNDVTAANLDNGTTIPADLVI 275
+ V L GV V FE ++ VTA ++GT +PADLVI
Sbjct: 184 VLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVI 243
Query: 276 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHS-FYNKNASI 334
GIG + N G++++ +V+NE+++T+ P + A GD A HS Y++ I
Sbjct: 244 AGIGLIPNCELASAAGLQVD--NGIVINEHMQTSDPLIMAVGDCAR--FHSQLYDRWVRI 299
Query: 335 GHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEAL 394
A R A + K P+FW+ + +G + G + G+ ++ + G L
Sbjct: 300 ESVPNALEQARKIAAILCGKVPRDEAAPWFWSDQYEIGLKMVGLSEGYDRIIVRGSLAQP 359
Query: 395 KFTAYYSNADKVLAILTV 412
F+ +Y D+VLA+ TV
Sbjct: 360 DFSVFYLQGDRVLAVDTV 377
Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 184/378 (48%), Gaps = 14/378 (3%)
Query: 596 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQL---DIKADSILL 652
D ++VG G +G LR +G+ G + + D +P+ LSK A+S+ L
Sbjct: 5 DNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYL 64
Query: 653 RTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGV 712
RT + Y +I ++ G ++ + + + +++ L DG ++D+ ++ LATG PR + A G
Sbjct: 65 RTPDAYAAQNIQLLGGTQVTAINR-DRQQVILSDGRALDYDRLVLATGGRPRPLPVASGA 123
Query: 713 ----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 768
N YLRT+EDA I + ++ +VVIG +IG+E AA VT++ A
Sbjct: 124 VGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAAR 183
Query: 769 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFE-KNEKNDVTAANLDNGTTIPADLVI 827
+ V L GV V FE ++ VTA ++GT +PADLVI
Sbjct: 184 VLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVI 243
Query: 828 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHS-FYNKNASI 886
GIG + N G++++ +V+NE+++T+ P + A GD A HS Y++ I
Sbjct: 244 AGIGLIPNCELASAAGLQVD--NGIVINEHMQTSDPLIMAVGDCAR--FHSQLYDRWVRI 299
Query: 887 GHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEAL 946
A R A + K P+FW+ + +G + G + G+ ++ + G L
Sbjct: 300 ESVPNALEQARKIAAILCGKVPRDEAAPWFWSDQYEIGLKMVGLSEGYDRIIVRGSLAQP 359
Query: 947 KFTAYYSNADKVLAILTV 964
F+ +Y D+VLA+ TV
Sbjct: 360 DFSVFYLQGDRVLAVDTV 377
Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 184/378 (48%), Gaps = 14/378 (3%)
Query: 1067 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQL---DIKADSILL 1123
D ++VG G +G LR +G+ G + + D +P+ LSK A+S+ L
Sbjct: 5 DNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYL 64
Query: 1124 RTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGV 1183
RT + Y +I ++ G ++ + + + +++ L DG ++D+ ++ LATG PR + A G
Sbjct: 65 RTPDAYAAQNIQLLGGTQVTAINR-DRQQVILSDGRALDYDRLVLATGGRPRPLPVASGA 123
Query: 1184 ----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 1239
N YLRT+EDA I + ++ +VVIG +IG+E AA VT++ A
Sbjct: 124 VGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAAR 183
Query: 1240 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFE-KNEKNDVTAANLDNGTTIPADLVI 1298
+ V L GV V FE ++ VTA ++GT +PADLVI
Sbjct: 184 VLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVI 243
Query: 1299 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHS-FYNKNASI 1357
GIG + N G++++ +V+NE+++T+ P + A GD A HS Y++ I
Sbjct: 244 AGIGLIPNCELASAAGLQVD--NGIVINEHMQTSDPLIMAVGDCAR--FHSQLYDRWVRI 299
Query: 1358 GHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEAL 1417
A R A + K P+FW+ + +G + G + G+ ++ + G L
Sbjct: 300 ESVPNALEQARKIAAILCGKVPRDEAAPWFWSDQYEIGLKMVGLSEGYDRIIVRGSLAQP 359
Query: 1418 KFTAYYSNADKVLAILTV 1435
F+ +Y D+VLA+ TV
Sbjct: 360 DFSVFYLQGDRVLAVDTV 377
>pdb|3LXD|A Chain A, Crystal Structure Of Ferredoxin Reductase Arr From
Novosphingobium Aromaticivorans
Length = 415
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 189/387 (48%), Gaps = 19/387 (4%)
Query: 1085 LRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKA---DSILLRTEEFYKDNDIHVIKGKK 1141
LRQNGF G++ I E +PY+R LSK+ + + I +R +F++D + + G +
Sbjct: 28 LRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAE 87
Query: 1142 IISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADG-VNKVFYLRTVEDANNIAP 1200
++S + +KL DG++I++ K+ ATG PR +S + V +RT EDA+ +
Sbjct: 88 VVS-LDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMA 146
Query: 1201 HITPES-NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFES 1259
+ + N VVIG +IG+EAAA +VT++ A+P L + GE +++ +++
Sbjct: 147 ELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLL--EALP--RVLARVAGEALSEFYQA 202
Query: 1260 K----GVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGV 1315
+ GV A + E + VT + +G+ IPAD+VIVGIG V L G
Sbjct: 203 EHRAHGVDLRTGAAMDCIE-GDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISAGA 261
Query: 1316 ELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNA-SIGHYQLAQYHGRIAALNM 1374
+G V V+E+ T++ VYA GD A A + F + + Q A AA ++
Sbjct: 262 --SGGNGVDVDEFCRTSLTDVYAIGDCA-AHANDFADGAVIRLESVQNANDMATAAAKDI 318
Query: 1375 VEKKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEALKFTAYYSNADKVLAILT 1434
P+FW+ + + + G + GH + GD F+ Y KV+A+
Sbjct: 319 CGAPVPYKATPWFWSNQYDLKLQTVGLSTGHDNAVLRGDPATRSFSVVYLKGGKVVALDC 378
Query: 1435 VGMDPLAAQFAERIKMQKYIQKDQIEN 1461
V M Q + ++ + I +Q+ +
Sbjct: 379 VNMVKDYVQGKKLVEARAQIAPEQLAD 405
Score = 141 bits (356), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 179/363 (49%), Gaps = 19/363 (5%)
Query: 62 LRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKA---DSILLRTEEFYKDNDIHVIKGKK 118
LRQNGF G++ I E +PY+R LSK+ + + I +R +F++D + + G +
Sbjct: 28 LRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAE 87
Query: 119 IISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADG-VNKVFYLRTVEDANNIAP 177
++S + +KL DG++I++ K+ ATG PR +S + V +RT EDA+ +
Sbjct: 88 VVS-LDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMA 146
Query: 178 HITPES-NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFES 236
+ + N VVIG +IG+EAAA +VT++ A+P L + GE +++ +++
Sbjct: 147 ELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLL--EALP--RVLARVAGEALSEFYQA 202
Query: 237 K----GVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGV 292
+ GV A + E + VT + +G+ IPAD+VIVGIG V L G
Sbjct: 203 EHRAHGVDLRTGAAMDCIE-GDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISAGA 261
Query: 293 ELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNA-SIGHYQLAQYHGRIAALNM 351
+G V V+E+ T++ VYA GD A A + F + + Q A AA ++
Sbjct: 262 --SGGNGVDVDEFCRTSLTDVYAIGDCA-AHANDFADGAVIRLESVQNANDMATAAAKDI 318
Query: 352 VEKKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEALKFTAYYSNADKVLAILT 411
P+FW+ + + + G + GH + GD F+ Y KV+A+
Sbjct: 319 CGAPVPYKATPWFWSNQYDLKLQTVGLSTGHDNAVLRGDPATRSFSVVYLKGGKVVALDC 378
Query: 412 VGM 414
V M
Sbjct: 379 VNM 381
Score = 141 bits (356), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 179/363 (49%), Gaps = 19/363 (5%)
Query: 614 LRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKA---DSILLRTEEFYKDNDIHVIKGKK 670
LRQNGF G++ I E +PY+R LSK+ + + I +R +F++D + + G +
Sbjct: 28 LRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAE 87
Query: 671 IISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADG-VNKVFYLRTVEDANNIAP 729
++S + +KL DG++I++ K+ ATG PR +S + V +RT EDA+ +
Sbjct: 88 VVS-LDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMA 146
Query: 730 HITPES-NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFES 788
+ + N VVIG +IG+EAAA +VT++ A+P L + GE +++ +++
Sbjct: 147 ELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLL--EALP--RVLARVAGEALSEFYQA 202
Query: 789 K----GVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGV 844
+ GV A + E + VT + +G+ IPAD+VIVGIG V L G
Sbjct: 203 EHRAHGVDLRTGAAMDCIE-GDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISAGA 261
Query: 845 ELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNA-SIGHYQLAQYHGRIAALNM 903
+G V V+E+ T++ VYA GD A A + F + + Q A AA ++
Sbjct: 262 --SGGNGVDVDEFCRTSLTDVYAIGDCA-AHANDFADGAVIRLESVQNANDMATAAAKDI 318
Query: 904 VEKKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEALKFTAYYSNADKVLAILT 963
P+FW+ + + + G + GH + GD F+ Y KV+A+
Sbjct: 319 CGAPVPYKATPWFWSNQYDLKLQTVGLSTGHDNAVLRGDPATRSFSVVYLKGGKVVALDC 378
Query: 964 VGM 966
V M
Sbjct: 379 VNM 381
>pdb|3FG2|P Chain P, Crystal Structure Of Ferredoxin Reductase For The Cyp199a2
System From Rhodopseudomonas Palustris
Length = 404
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 178/377 (47%), Gaps = 18/377 (4%)
Query: 44 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKA----DSIL 99
DT ++ G G +G +LRQ + G++ I DE LPY R LSK +K+ +S++
Sbjct: 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAY-LKSGGDPNSLM 60
Query: 100 LRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADG 159
R E+F++D I +I + + D E +K+ L GT+I++ + LATG+ R + +
Sbjct: 61 FRPEKFFQDQAIELISDRMVSIDRE--GRKLLLASGTAIEYGHLVLATGARNRMLDVPNA 118
Query: 160 -VNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPF 218
+ V YLRT++++ + + + +VVVIG+ FIG+E AA +K V VV
Sbjct: 119 SLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAP--- 175
Query: 219 QESLGKEVGERITKLFESK--GVKFVMKANVSSFE-KNEKNDVTAANLDNGTTIPADLVI 275
+ + V I+ F + G M V + E E + VT L +G T+P DLV+
Sbjct: 176 -RVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVV 234
Query: 276 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIG 335
VG+G + N L ++V++ L T+ P + A GD A F + +
Sbjct: 235 VGVGVIPNVEIA--AAAGLPTAAGIIVDQQLLTSDPHISAIGDCALFESVRF-GETMRVE 291
Query: 336 HYQLAQYHGRIAALNMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEALK 395
Q A R A + P+FW+ + G AG QV I G +
Sbjct: 292 SVQNATDQARCVAARLTGDAKPYDGYPWFWSDQGDDKLQIVGLTAGFDQVVIRGSVAERS 351
Query: 396 FTAYYSNADKVLAILTV 412
F+A+ A K++ I +V
Sbjct: 352 FSAFCYKAGKLIGIESV 368
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 178/377 (47%), Gaps = 18/377 (4%)
Query: 596 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKA----DSIL 651
DT ++ G G +G +LRQ + G++ I DE LPY R LSK +K+ +S++
Sbjct: 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAY-LKSGGDPNSLM 60
Query: 652 LRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADG 711
R E+F++D I +I + + D E +K+ L GT+I++ + LATG+ R + +
Sbjct: 61 FRPEKFFQDQAIELISDRMVSIDRE--GRKLLLASGTAIEYGHLVLATGARNRMLDVPNA 118
Query: 712 -VNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPF 770
+ V YLRT++++ + + + +VVVIG+ FIG+E AA +K V VV
Sbjct: 119 SLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAP--- 175
Query: 771 QESLGKEVGERITKLFESK--GVKFVMKANVSSFE-KNEKNDVTAANLDNGTTIPADLVI 827
+ + V I+ F + G M V + E E + VT L +G T+P DLV+
Sbjct: 176 -RVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVV 234
Query: 828 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIG 887
VG+G + N L ++V++ L T+ P + A GD A F + +
Sbjct: 235 VGVGVIPNVEIA--AAAGLPTAAGIIVDQQLLTSDPHISAIGDCALFESVRF-GETMRVE 291
Query: 888 HYQLAQYHGRIAALNMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEALK 947
Q A R A + P+FW+ + G AG QV I G +
Sbjct: 292 SVQNATDQARCVAARLTGDAKPYDGYPWFWSDQGDDKLQIVGLTAGFDQVVIRGSVAERS 351
Query: 948 FTAYYSNADKVLAILTV 964
F+A+ A K++ I +V
Sbjct: 352 FSAFCYKAGKLIGIESV 368
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 178/377 (47%), Gaps = 18/377 (4%)
Query: 1067 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKA----DSIL 1122
DT ++ G G +G +LRQ + G++ I DE LPY R LSK +K+ +S++
Sbjct: 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAY-LKSGGDPNSLM 60
Query: 1123 LRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADG 1182
R E+F++D I +I + + D E +K+ L GT+I++ + LATG+ R + +
Sbjct: 61 FRPEKFFQDQAIELISDRMVSIDRE--GRKLLLASGTAIEYGHLVLATGARNRMLDVPNA 118
Query: 1183 -VNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPF 1241
+ V YLRT++++ + + + +VVVIG+ FIG+E AA +K V VV
Sbjct: 119 SLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAP--- 175
Query: 1242 QESLGKEVGERITKLFESK--GVKFVMKANVSSFE-KNEKNDVTAANLDNGTTIPADLVI 1298
+ + V I+ F + G M V + E E + VT L +G T+P DLV+
Sbjct: 176 -RVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVV 234
Query: 1299 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIG 1358
VG+G + N L ++V++ L T+ P + A GD A F + +
Sbjct: 235 VGVGVIPNVEIA--AAAGLPTAAGIIVDQQLLTSDPHISAIGDCALFESVRF-GETMRVE 291
Query: 1359 HYQLAQYHGRIAALNMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEALK 1418
Q A R A + P+FW+ + G AG QV I G +
Sbjct: 292 SVQNATDQARCVAARLTGDAKPYDGYPWFWSDQGDDKLQIVGLTAGFDQVVIRGSVAERS 351
Query: 1419 FTAYYSNADKVLAILTV 1435
F+A+ A K++ I +V
Sbjct: 352 FSAFCYKAGKLIGIESV 368
>pdb|1D7Y|A Chain A, Crystal Structure Of Nadh-Dependent Ferredoxin Reductase,
Bpha4
pdb|1F3P|A Chain A, Ferredoxin Reductase (Bpha4)-Nadh Complex
pdb|2GQW|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (Oxidized
Form)
pdb|2GR0|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (oxidized
Form, Nad+ Complex)
pdb|2GR1|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4
(Hydroquinone)
pdb|2GR2|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (Oxidized
Form)
pdb|2YVF|A Chain A, Crystal Structure Of Ferredoxin Reductase Bpha4
(Hydroquinone)
pdb|2YVG|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4
(Blue-Semiquinone)
pdb|2YVJ|A Chain A, Crystal Structure Of The Ferredoxin-Ferredoxin Reductase
(Bpha3-Bpha4)complex
pdb|2YVJ|P Chain P, Crystal Structure Of The Ferredoxin-Ferredoxin Reductase
(Bpha3-Bpha4)complex
Length = 408
Score = 120 bits (300), Expect = 6e-27, Method: Composition-based stats.
Identities = 108/398 (27%), Positives = 183/398 (45%), Gaps = 26/398 (6%)
Query: 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLRT 654
K +V+G G + + V LRQ G+ G + + DE PYDR LSK D+ +R
Sbjct: 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRL 66
Query: 655 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN- 713
+ + ++ + G S + + L DG ++ + + LATG++PR + G
Sbjct: 67 -DCKRAPEVEWLLGVTAQS-FDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATM 124
Query: 714 KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQES 773
V LRT+EDA I + P+S ++++G IG+E AA + V++V +
Sbjct: 125 PVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA 184
Query: 774 LGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAAN-LDNGTTIPADLVIVGIGT 832
+ + + + ++GV FE++ V LD+GT I AD+V+VGIG
Sbjct: 185 APATLADFVARYHAAQGVDL-------RFERSVTGSVDGVVLLDDGTRIAADMVVVGIGV 237
Query: 833 VLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYA--PLHSFYNKNASIGHYQ 890
+ N G+ + + V+ Y T P VYA GD+ PL + + I +
Sbjct: 238 LANDALARAAGLACD--DGIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFER---IETWS 292
Query: 891 LAQYHGRIAALNMVEKKT-SLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGD--LEALK 947
AQ G A ++V+ + +P++W+ + + AG A+G ++ + G+ L+A K
Sbjct: 293 NAQNQGIAVARHLVDPTAPGYAELPWYWSDQGALRIQVAGLASGDEEI-VRGEVSLDAPK 351
Query: 948 FTAYYSNADKVLAILTVGMDPLAAQFAE-RNIYAVGTK 984
FT +++ V A FA R + AVG K
Sbjct: 352 FTLIELQKGRIVGATCVNN---ARDFAPLRRLLAVGAK 386
Score = 118 bits (296), Expect = 2e-26, Method: Composition-based stats.
Identities = 99/362 (27%), Positives = 170/362 (46%), Gaps = 22/362 (6%)
Query: 43 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLRT 102
K +V+G G + + V LRQ G+ G + + DE PYDR LSK D+ +R
Sbjct: 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRL 66
Query: 103 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN- 161
+ + ++ + G S + + L DG ++ + + LATG++PR + G
Sbjct: 67 -DCKRAPEVEWLLGVTAQS-FDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATM 124
Query: 162 KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQES 221
V LRT+EDA I + P+S ++++G IG+E AA + V++V +
Sbjct: 125 PVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA 184
Query: 222 LGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAAN-LDNGTTIPADLVIVGIGT 280
+ + + + ++GV FE++ V LD+GT I AD+V+VGIG
Sbjct: 185 APATLADFVARYHAAQGVDL-------RFERSVTGSVDGVVLLDDGTRIAADMVVVGIGV 237
Query: 281 VLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYA--PLHSFYNKNASIGHYQ 338
+ N G+ + + V+ Y T P VYA GD+ PL + + I +
Sbjct: 238 LANDALARAAGLACD--DGIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFER---IETWS 292
Query: 339 LAQYHGRIAALNMVEKKT-SLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGD--LEALK 395
AQ G A ++V+ + +P++W+ + + AG A+G ++ + G+ L+A K
Sbjct: 293 NAQNQGIAVARHLVDPTAPGYAELPWYWSDQGALRIQVAGLASGDEEI-VRGEVSLDAPK 351
Query: 396 FT 397
FT
Sbjct: 352 FT 353
Score = 118 bits (296), Expect = 2e-26, Method: Composition-based stats.
Identities = 99/362 (27%), Positives = 170/362 (46%), Gaps = 22/362 (6%)
Query: 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLRT 1125
K +V+G G + + V LRQ G+ G + + DE PYDR LSK D+ +R
Sbjct: 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRL 66
Query: 1126 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN- 1184
+ + ++ + G S + + L DG ++ + + LATG++PR + G
Sbjct: 67 -DCKRAPEVEWLLGVTAQS-FDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATM 124
Query: 1185 KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQES 1244
V LRT+EDA I + P+S ++++G IG+E AA + V++V +
Sbjct: 125 PVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA 184
Query: 1245 LGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAAN-LDNGTTIPADLVIVGIGT 1303
+ + + + ++GV FE++ V LD+GT I AD+V+VGIG
Sbjct: 185 APATLADFVARYHAAQGVDL-------RFERSVTGSVDGVVLLDDGTRIAADMVVVGIGV 237
Query: 1304 VLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYA--PLHSFYNKNASIGHYQ 1361
+ N G+ + + V+ Y T P VYA GD+ PL + + I +
Sbjct: 238 LANDALARAAGLACD--DGIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFER---IETWS 292
Query: 1362 LAQYHGRIAALNMVEKKT-SLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGD--LEALK 1418
AQ G A ++V+ + +P++W+ + + AG A+G ++ + G+ L+A K
Sbjct: 293 NAQNQGIAVARHLVDPTAPGYAELPWYWSDQGALRIQVAGLASGDEEI-VRGEVSLDAPK 351
Query: 1419 FT 1420
FT
Sbjct: 352 FT 353
>pdb|2GR3|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (Oxidized
Form)
Length = 408
Score = 115 bits (289), Expect = 1e-25, Method: Composition-based stats.
Identities = 107/398 (26%), Positives = 183/398 (45%), Gaps = 26/398 (6%)
Query: 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLRT 654
K +V+G G + + V LRQ G+ G + + DE PYDR LSK D+ +R
Sbjct: 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRL 66
Query: 655 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN- 713
+ + ++ + G S + + L DG ++ + + LATG++PR + G
Sbjct: 67 -DCKRAPEVEWLLGVTAQS-FDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATM 124
Query: 714 KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQES 773
V LRT+EDA I + P+S ++++G IG+E AA + V++V +
Sbjct: 125 PVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA 184
Query: 774 LGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAAN-LDNGTTIPADLVIVGIGT 832
+ + + + ++GV FE++ V LD+GT I AD+V+VGIG
Sbjct: 185 APATLADFVARYHAAQGVDL-------RFERSVTGSVDGVVLLDDGTRIAADMVVVGIGV 237
Query: 833 VLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYA--PLHSFYNKNASIGHYQ 890
+ N G+ + + V+ Y T P VYA GD+ PL + + I +
Sbjct: 238 LANDALARAAGLACD--DGIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFER---IETWS 292
Query: 891 LAQYHGRIAALNMVEKKT-SLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGD--LEALK 947
AQ G A ++V+ + +P++++ + + AG A+G ++ + G+ L+A K
Sbjct: 293 NAQNQGIAVARHLVDPTAPGYAELPWYFSDQGALRIQVAGLASGDEEI-VRGEVSLDAPK 351
Query: 948 FTAYYSNADKVLAILTVGMDPLAAQFAE-RNIYAVGTK 984
FT +++ V A FA R + AVG K
Sbjct: 352 FTLIELQKGRIVGATCVNN---ARDFAPLRRLLAVGAK 386
Score = 114 bits (285), Expect = 5e-25, Method: Composition-based stats.
Identities = 98/362 (27%), Positives = 170/362 (46%), Gaps = 22/362 (6%)
Query: 43 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLRT 102
K +V+G G + + V LRQ G+ G + + DE PYDR LSK D+ +R
Sbjct: 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRL 66
Query: 103 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN- 161
+ + ++ + G S + + L DG ++ + + LATG++PR + G
Sbjct: 67 -DCKRAPEVEWLLGVTAQS-FDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATM 124
Query: 162 KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQES 221
V LRT+EDA I + P+S ++++G IG+E AA + V++V +
Sbjct: 125 PVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA 184
Query: 222 LGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAAN-LDNGTTIPADLVIVGIGT 280
+ + + + ++GV FE++ V LD+GT I AD+V+VGIG
Sbjct: 185 APATLADFVARYHAAQGVDL-------RFERSVTGSVDGVVLLDDGTRIAADMVVVGIGV 237
Query: 281 VLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYA--PLHSFYNKNASIGHYQ 338
+ N G+ + + V+ Y T P VYA GD+ PL + + I +
Sbjct: 238 LANDALARAAGLACD--DGIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFER---IETWS 292
Query: 339 LAQYHGRIAALNMVEKKT-SLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGD--LEALK 395
AQ G A ++V+ + +P++++ + + AG A+G ++ + G+ L+A K
Sbjct: 293 NAQNQGIAVARHLVDPTAPGYAELPWYFSDQGALRIQVAGLASGDEEI-VRGEVSLDAPK 351
Query: 396 FT 397
FT
Sbjct: 352 FT 353
Score = 114 bits (285), Expect = 5e-25, Method: Composition-based stats.
Identities = 98/362 (27%), Positives = 170/362 (46%), Gaps = 22/362 (6%)
Query: 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLRT 1125
K +V+G G + + V LRQ G+ G + + DE PYDR LSK D+ +R
Sbjct: 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRL 66
Query: 1126 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN- 1184
+ + ++ + G S + + L DG ++ + + LATG++PR + G
Sbjct: 67 -DCKRAPEVEWLLGVTAQS-FDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATM 124
Query: 1185 KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQES 1244
V LRT+EDA I + P+S ++++G IG+E AA + V++V +
Sbjct: 125 PVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA 184
Query: 1245 LGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAAN-LDNGTTIPADLVIVGIGT 1303
+ + + + ++GV FE++ V LD+GT I AD+V+VGIG
Sbjct: 185 APATLADFVARYHAAQGVDL-------RFERSVTGSVDGVVLLDDGTRIAADMVVVGIGV 237
Query: 1304 VLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYA--PLHSFYNKNASIGHYQ 1361
+ N G+ + + V+ Y T P VYA GD+ PL + + I +
Sbjct: 238 LANDALARAAGLACD--DGIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFER---IETWS 292
Query: 1362 LAQYHGRIAALNMVEKKT-SLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGD--LEALK 1418
AQ G A ++V+ + +P++++ + + AG A+G ++ + G+ L+A K
Sbjct: 293 NAQNQGIAVARHLVDPTAPGYAELPWYFSDQGALRIQVAGLASGDEEI-VRGEVSLDAPK 351
Query: 1419 FT 1420
FT
Sbjct: 352 FT 353
>pdb|3EF6|A Chain A, Crystal Structure Of Toluene 2,3-Dioxygenase Reductase
pdb|4EMI|A Chain A, Toluene Dioxygenase Reductase In Reduced State In Complex
With Nad+
pdb|4EMJ|A Chain A, Complex Between The Reductase And Ferredoxin Components Of
Toluene Dioxygenase
Length = 410
Score = 103 bits (256), Expect = 1e-21, Method: Composition-based stats.
Identities = 95/340 (27%), Positives = 152/340 (44%), Gaps = 16/340 (4%)
Query: 48 VVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQ-LDIKADS-ILLRTEEF 105
++G G G T + LR GF G++ I DE LPYDR LSK LD + +L ++
Sbjct: 7 IIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADW 66
Query: 106 YKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTI----SQADGVN 161
Y + I ++ G ++ + ++ + I L DGT++ I +ATGS RT+ SQ G
Sbjct: 67 YGEARIDMLTGPEVTA-LDVQTRTISLDDGTTLSADAIVIATGSRARTMALPGSQLPG-- 123
Query: 162 KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQES 221
V LRT D + T + ++++G IG E A SVT++ G
Sbjct: 124 -VVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRV 182
Query: 222 LGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV 281
LG+ +G + L GV+ + V F + + A+ +G + AD ++ +G
Sbjct: 183 LGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMAS--DGRSFVADSALICVGAE 240
Query: 282 LNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQ 341
G+ + + V+V+ T GV+A GD+A PL + S+ Y AQ
Sbjct: 241 PADQLARQAGLACD--RGVIVDHCGATLAKGVFAVGDVASWPLRA--GGRRSLETYMNAQ 296
Query: 342 YHGRIAALNMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAG 381
A ++ K S +P WT + G + AG G
Sbjct: 297 RQAAAVAAAILGKNVSAPQLPVSWTEIAGHRMQMAGDIEG 336
Score = 103 bits (256), Expect = 1e-21, Method: Composition-based stats.
Identities = 95/340 (27%), Positives = 152/340 (44%), Gaps = 16/340 (4%)
Query: 600 VVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQ-LDIKADS-ILLRTEEF 657
++G G G T + LR GF G++ I DE LPYDR LSK LD + +L ++
Sbjct: 7 IIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADW 66
Query: 658 YKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTI----SQADGVN 713
Y + I ++ G ++ + ++ + I L DGT++ I +ATGS RT+ SQ G
Sbjct: 67 YGEARIDMLTGPEVTA-LDVQTRTISLDDGTTLSADAIVIATGSRARTMALPGSQLPG-- 123
Query: 714 KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQES 773
V LRT D + T + ++++G IG E A SVT++ G
Sbjct: 124 -VVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRV 182
Query: 774 LGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV 833
LG+ +G + L GV+ + V F + + A+ +G + AD ++ +G
Sbjct: 183 LGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMAS--DGRSFVADSALICVGAE 240
Query: 834 LNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQ 893
G+ + + V+V+ T GV+A GD+A PL + S+ Y AQ
Sbjct: 241 PADQLARQAGLACD--RGVIVDHCGATLAKGVFAVGDVASWPLRA--GGRRSLETYMNAQ 296
Query: 894 YHGRIAALNMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAG 933
A ++ K S +P WT + G + AG G
Sbjct: 297 RQAAAVAAAILGKNVSAPQLPVSWTEIAGHRMQMAGDIEG 336
Score = 103 bits (256), Expect = 1e-21, Method: Composition-based stats.
Identities = 95/340 (27%), Positives = 152/340 (44%), Gaps = 16/340 (4%)
Query: 1071 VVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQ-LDIKADS-ILLRTEEF 1128
++G G G T + LR GF G++ I DE LPYDR LSK LD + +L ++
Sbjct: 7 IIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADW 66
Query: 1129 YKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTI----SQADGVN 1184
Y + I ++ G ++ + ++ + I L DGT++ I +ATGS RT+ SQ G
Sbjct: 67 YGEARIDMLTGPEVTA-LDVQTRTISLDDGTTLSADAIVIATGSRARTMALPGSQLPG-- 123
Query: 1185 KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQES 1244
V LRT D + T + ++++G IG E A SVT++ G
Sbjct: 124 -VVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRV 182
Query: 1245 LGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV 1304
LG+ +G + L GV+ + V F + + A+ +G + AD ++ +G
Sbjct: 183 LGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMAS--DGRSFVADSALICVGAE 240
Query: 1305 LNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQ 1364
G+ + + V+V+ T GV+A GD+A PL + S+ Y AQ
Sbjct: 241 PADQLARQAGLACD--RGVIVDHCGATLAKGVFAVGDVASWPLRA--GGRRSLETYMNAQ 296
Query: 1365 YHGRIAALNMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAG 1404
A ++ K S +P WT + G + AG G
Sbjct: 297 RQAAAVAAAILGKNVSAPQLPVSWTEIAGHRMQMAGDIEG 336
>pdb|3CGC|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGC|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGD|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGD|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGE|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
pdb|3CGE|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
Length = 480
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 121/248 (48%), Gaps = 28/248 (11%)
Query: 127 EKKI------KLQDGTSIDFTKIYLATGSSPRTISQADG--VNKVFYLRTVEDANNIAPH 178
EKKI K +D + ++ +ATG P + + +G + V L+T+ DA I
Sbjct: 122 EKKIVYAEHTKTKDVFEFSYDRLLIATGVRP-VMPEWEGRDLQGVHLLKTIPDAERILK- 179
Query: 179 ITPESN----VVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGK----EVGERI 230
T E+N V +IG IG+E A K V ++ R + +G ++ E I
Sbjct: 180 -TLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIER-----NDHIGTIYDGDMAEYI 233
Query: 231 TKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGK 290
K + ++ + NV +F+ NE+ V A D GT ADLV+V +G NT++L+G
Sbjct: 234 YKEADKHHIEILTNENVKAFKGNER--VEAVETDKGT-YKADLVLVSVGVKPNTDFLEGT 290
Query: 291 GVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALN 350
+ N + A+ VN Y++TNV VYA GD A H + I A GR+A LN
Sbjct: 291 NIRTNHKGAIEVNAYMQTNVQDVYAAGDCA-THYHVIKEIHDHIPIGTTANKQGRLAGLN 349
Query: 351 MVEKKTSL 358
M++K+ +
Sbjct: 350 MLDKRRAF 357
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 121/248 (48%), Gaps = 28/248 (11%)
Query: 679 EKKI------KLQDGTSIDFTKIYLATGSSPRTISQADG--VNKVFYLRTVEDANNIAPH 730
EKKI K +D + ++ +ATG P + + +G + V L+T+ DA I
Sbjct: 122 EKKIVYAEHTKTKDVFEFSYDRLLIATGVRP-VMPEWEGRDLQGVHLLKTIPDAERILK- 179
Query: 731 ITPESN----VVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGK----EVGERI 782
T E+N V +IG IG+E A K V ++ R + +G ++ E I
Sbjct: 180 -TLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIER-----NDHIGTIYDGDMAEYI 233
Query: 783 TKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGK 842
K + ++ + NV +F+ NE+ V A D GT ADLV+V +G NT++L+G
Sbjct: 234 YKEADKHHIEILTNENVKAFKGNER--VEAVETDKGT-YKADLVLVSVGVKPNTDFLEGT 290
Query: 843 GVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALN 902
+ N + A+ VN Y++TNV VYA GD A H + I A GR+A LN
Sbjct: 291 NIRTNHKGAIEVNAYMQTNVQDVYAAGDCA-THYHVIKEIHDHIPIGTTANKQGRLAGLN 349
Query: 903 MVEKKTSL 910
M++K+ +
Sbjct: 350 MLDKRRAF 357
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 121/248 (48%), Gaps = 28/248 (11%)
Query: 1150 EKKI------KLQDGTSIDFTKIYLATGSSPRTISQADG--VNKVFYLRTVEDANNIAPH 1201
EKKI K +D + ++ +ATG P + + +G + V L+T+ DA I
Sbjct: 122 EKKIVYAEHTKTKDVFEFSYDRLLIATGVRP-VMPEWEGRDLQGVHLLKTIPDAERILK- 179
Query: 1202 ITPESN----VVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGK----EVGERI 1253
T E+N V +IG IG+E A K V ++ R + +G ++ E I
Sbjct: 180 -TLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIER-----NDHIGTIYDGDMAEYI 233
Query: 1254 TKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGK 1313
K + ++ + NV +F+ NE+ V A D GT ADLV+V +G NT++L+G
Sbjct: 234 YKEADKHHIEILTNENVKAFKGNER--VEAVETDKGT-YKADLVLVSVGVKPNTDFLEGT 290
Query: 1314 GVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALN 1373
+ N + A+ VN Y++TNV VYA GD A H + I A GR+A LN
Sbjct: 291 NIRTNHKGAIEVNAYMQTNVQDVYAAGDCA-THYHVIKEIHDHIPIGTTANKQGRLAGLN 349
Query: 1374 MVEKKTSL 1381
M++K+ +
Sbjct: 350 MLDKRRAF 357
>pdb|3CGB|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
pdb|3CGB|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
Length = 480
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 26/247 (10%)
Query: 127 EKKI------KLQDGTSIDFTKIYLATGSSPRTIS-QADGVNKVFYLRTVEDANNIAPHI 179
EKKI K +D + ++ +ATG P + + V L+T+ DA I
Sbjct: 122 EKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVXPEWEGRDLQGVHLLKTIPDAERILK-- 179
Query: 180 TPESN----VVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGK----EVGERIT 231
T E+N V +IG IG+E A K V + R + +G + E I
Sbjct: 180 TLETNKVEDVTIIGGGAIGLEXAETFVELGKKVRXIER-----NDHIGTIYDGDXAEYIY 234
Query: 232 KLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKG 291
K + ++ + NV +F+ NE+ V A D GT ADLV+V +G NT++L+G
Sbjct: 235 KEADKHHIEILTNENVKAFKGNER--VEAVETDKGT-YKADLVLVSVGVKPNTDFLEGTN 291
Query: 292 VELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNM 351
+ N + A+ VN Y +TNV VYA GD A H + I A GR+A LN
Sbjct: 292 IRTNHKGAIEVNAYXQTNVQDVYAAGDCA-THYHVIKEIHDHIPIGTTANKQGRLAGLNX 350
Query: 352 VEKKTSL 358
++K+ +
Sbjct: 351 LDKRRAF 357
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 26/247 (10%)
Query: 679 EKKI------KLQDGTSIDFTKIYLATGSSPRTIS-QADGVNKVFYLRTVEDANNIAPHI 731
EKKI K +D + ++ +ATG P + + V L+T+ DA I
Sbjct: 122 EKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVXPEWEGRDLQGVHLLKTIPDAERILK-- 179
Query: 732 TPESN----VVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGK----EVGERIT 783
T E+N V +IG IG+E A K V + R + +G + E I
Sbjct: 180 TLETNKVEDVTIIGGGAIGLEXAETFVELGKKVRXIER-----NDHIGTIYDGDXAEYIY 234
Query: 784 KLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKG 843
K + ++ + NV +F+ NE+ V A D GT ADLV+V +G NT++L+G
Sbjct: 235 KEADKHHIEILTNENVKAFKGNER--VEAVETDKGT-YKADLVLVSVGVKPNTDFLEGTN 291
Query: 844 VELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNM 903
+ N + A+ VN Y +TNV VYA GD A H + I A GR+A LN
Sbjct: 292 IRTNHKGAIEVNAYXQTNVQDVYAAGDCA-THYHVIKEIHDHIPIGTTANKQGRLAGLNX 350
Query: 904 VEKKTSL 910
++K+ +
Sbjct: 351 LDKRRAF 357
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 26/247 (10%)
Query: 1150 EKKI------KLQDGTSIDFTKIYLATGSSPRTIS-QADGVNKVFYLRTVEDANNIAPHI 1202
EKKI K +D + ++ +ATG P + + V L+T+ DA I
Sbjct: 122 EKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVXPEWEGRDLQGVHLLKTIPDAERILK-- 179
Query: 1203 TPESN----VVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGK----EVGERIT 1254
T E+N V +IG IG+E A K V + R + +G + E I
Sbjct: 180 TLETNKVEDVTIIGGGAIGLEXAETFVELGKKVRXIER-----NDHIGTIYDGDXAEYIY 234
Query: 1255 KLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKG 1314
K + ++ + NV +F+ NE+ V A D GT ADLV+V +G NT++L+G
Sbjct: 235 KEADKHHIEILTNENVKAFKGNER--VEAVETDKGT-YKADLVLVSVGVKPNTDFLEGTN 291
Query: 1315 VELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNM 1374
+ N + A+ VN Y +TNV VYA GD A H + I A GR+A LN
Sbjct: 292 IRTNHKGAIEVNAYXQTNVQDVYAAGDCA-THYHVIKEIHDHIPIGTTANKQGRLAGLNX 350
Query: 1375 VEKKTSL 1381
++K+ +
Sbjct: 351 LDKRRAF 357
>pdb|3KLJ|A Chain A, Crystal Structure Of Nadh:rubredoxin Oxidoreductase From
Clostridium Acetobutylicum
Length = 385
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 150/321 (46%), Gaps = 36/321 (11%)
Query: 46 FIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQL--DIKADSILLRTE 103
+++G GP+G + + G + I E +LPY R +L++ + + D IL++
Sbjct: 12 ILILGAGPAGFSAAKAAL--GKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKN 69
Query: 104 EFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKV 163
++Y+ N+I VI + + + N K + L+ G I + K+ +A+GS I + +++
Sbjct: 70 DWYEKNNIKVITSE-FATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKI-KVPHADEI 127
Query: 164 FYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV---PFQE 220
F L + +DA I + +IG +G+E A + + S T G + P +
Sbjct: 128 FSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQ---AIIDSGTPASIGIILEYPLER 184
Query: 221 SLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGT 280
L ++ G + + G+K +N FE + G I + VI +G
Sbjct: 185 QLDRDGGLFLKDKLDRLGIKIYTNSN---FE------------EMGDLIRSSCVITAVGV 229
Query: 281 VLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLA 340
N +++ K E+ ++ ++VN+++ET++ +YA GD+A FY KN G +A
Sbjct: 230 KPNLDFI--KDTEIASKRGILVNDHMETSIKDIYACGDVA-----EFYGKNP--GLINIA 280
Query: 341 QYHGRIAALNMVEKKTSLSTI 361
G +A LN + S S I
Sbjct: 281 NKQGEVAGLNACGEDASYSEI 301
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 150/321 (46%), Gaps = 36/321 (11%)
Query: 598 FIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQL--DIKADSILLRTE 655
+++G GP+G + + G + I E +LPY R +L++ + + D IL++
Sbjct: 12 ILILGAGPAGFSAAKAAL--GKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKN 69
Query: 656 EFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKV 715
++Y+ N+I VI + + + N K + L+ G I + K+ +A+GS I + +++
Sbjct: 70 DWYEKNNIKVITSE-FATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKI-KVPHADEI 127
Query: 716 FYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV---PFQE 772
F L + +DA I + +IG +G+E A + + S T G + P +
Sbjct: 128 FSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQ---AIIDSGTPASIGIILEYPLER 184
Query: 773 SLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGT 832
L ++ G + + G+K +N FE + G I + VI +G
Sbjct: 185 QLDRDGGLFLKDKLDRLGIKIYTNSN---FE------------EMGDLIRSSCVITAVGV 229
Query: 833 VLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLA 892
N +++ K E+ ++ ++VN+++ET++ +YA GD+A FY KN G +A
Sbjct: 230 KPNLDFI--KDTEIASKRGILVNDHMETSIKDIYACGDVA-----EFYGKNP--GLINIA 280
Query: 893 QYHGRIAALNMVEKKTSLSTI 913
G +A LN + S S I
Sbjct: 281 NKQGEVAGLNACGEDASYSEI 301
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 150/321 (46%), Gaps = 36/321 (11%)
Query: 1069 FIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQL--DIKADSILLRTE 1126
+++G GP+G + + G + I E +LPY R +L++ + + D IL++
Sbjct: 12 ILILGAGPAGFSAAKAAL--GKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKN 69
Query: 1127 EFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKV 1186
++Y+ N+I VI + + + N K + L+ G I + K+ +A+GS I + +++
Sbjct: 70 DWYEKNNIKVITSE-FATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKI-KVPHADEI 127
Query: 1187 FYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV---PFQE 1243
F L + +DA I + +IG +G+E A + + S T G + P +
Sbjct: 128 FSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQ---AIIDSGTPASIGIILEYPLER 184
Query: 1244 SLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGT 1303
L ++ G + + G+K +N FE + G I + VI +G
Sbjct: 185 QLDRDGGLFLKDKLDRLGIKIYTNSN---FE------------EMGDLIRSSCVITAVGV 229
Query: 1304 VLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLA 1363
N +++ K E+ ++ ++VN+++ET++ +YA GD+A FY KN G +A
Sbjct: 230 KPNLDFI--KDTEIASKRGILVNDHMETSIKDIYACGDVA-----EFYGKNP--GLINIA 280
Query: 1364 QYHGRIAALNMVEKKTSLSTI 1384
G +A LN + S S I
Sbjct: 281 NKQGEVAGLNACGEDASYSEI 301
>pdb|2CDU|A Chain A, The Crystal Structure Of Water-Forming Nad(P)h Oxidase
From Lactobacillus Sanfranciscensis
pdb|2CDU|B Chain B, The Crystal Structure Of Water-Forming Nad(P)h Oxidase
From Lactobacillus Sanfranciscensis
Length = 452
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 126/261 (48%), Gaps = 18/261 (6%)
Query: 97 SILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQ 156
++ +R + D + IK K +I++ E E + K+ + TGS P T+
Sbjct: 74 NVQMRHQVTNVDPETKTIKVKDLITNEEKTEA-----------YDKLIMTTGSKP-TVPP 121
Query: 157 ADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRG 214
G++ +V+ + DA + + +IGS +IG E A +++ +V ++
Sbjct: 122 IPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGH 181
Query: 215 AVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLV 274
+ KE + + K +E+ GV V+ + V++FE+ + +++ LD G I +D+
Sbjct: 182 ERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVD-DEIITKTLD-GKEIKSDIA 239
Query: 275 IVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASI 334
I+ IG NT L GK V + A++ +EY+ ++ ++A GD A A ++ N NA I
Sbjct: 240 ILCIGFRPNTELLKGK-VAMLDNGAIITDEYMHSSNRDIFAAGDSA-AVHYNPTNSNAYI 297
Query: 335 GHYQLAQYHGRIAALNMVEKK 355
A GR+ LN+ E K
Sbjct: 298 PLATNAVRQGRLVGLNLTEDK 318
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 126/261 (48%), Gaps = 18/261 (6%)
Query: 649 SILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQ 708
++ +R + D + IK K +I++ E E + K+ + TGS P T+
Sbjct: 74 NVQMRHQVTNVDPETKTIKVKDLITNEEKTEA-----------YDKLIMTTGSKP-TVPP 121
Query: 709 ADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRG 766
G++ +V+ + DA + + +IGS +IG E A +++ +V ++
Sbjct: 122 IPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGH 181
Query: 767 AVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLV 826
+ KE + + K +E+ GV V+ + V++FE+ + +++ LD G I +D+
Sbjct: 182 ERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVD-DEIITKTLD-GKEIKSDIA 239
Query: 827 IVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASI 886
I+ IG NT L GK V + A++ +EY+ ++ ++A GD A A ++ N NA I
Sbjct: 240 ILCIGFRPNTELLKGK-VAMLDNGAIITDEYMHSSNRDIFAAGDSA-AVHYNPTNSNAYI 297
Query: 887 GHYQLAQYHGRIAALNMVEKK 907
A GR+ LN+ E K
Sbjct: 298 PLATNAVRQGRLVGLNLTEDK 318
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 126/261 (48%), Gaps = 18/261 (6%)
Query: 1120 SILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQ 1179
++ +R + D + IK K +I++ E E + K+ + TGS P T+
Sbjct: 74 NVQMRHQVTNVDPETKTIKVKDLITNEEKTEA-----------YDKLIMTTGSKP-TVPP 121
Query: 1180 ADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRG 1237
G++ +V+ + DA + + +IGS +IG E A +++ +V ++
Sbjct: 122 IPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGH 181
Query: 1238 AVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLV 1297
+ KE + + K +E+ GV V+ + V++FE+ + +++ LD G I +D+
Sbjct: 182 ERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVD-DEIITKTLD-GKEIKSDIA 239
Query: 1298 IVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASI 1357
I+ IG NT L GK V + A++ +EY+ ++ ++A GD A A ++ N NA I
Sbjct: 240 ILCIGFRPNTELLKGK-VAMLDNGAIITDEYMHSSNRDIFAAGDSA-AVHYNPTNSNAYI 297
Query: 1358 GHYQLAQYHGRIAALNMVEKK 1378
A GR+ LN+ E K
Sbjct: 298 PLATNAVRQGRLVGLNLTEDK 318
>pdb|1ZK7|A Chain A, Crystal Structure Of Tn501 Mera
pdb|1ZX9|A Chain A, Crystal Structure Of Tn501 Mera
Length = 467
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 18/247 (7%)
Query: 83 DRVKLSKQLDIKADSIL-LRTEEFYKDND-IHVIKGKKIISDSELNEKKIKLQDGTS--I 138
DR KL Q + D + + E N I V+ G+ D + ++L +G +
Sbjct: 80 DRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQ--SLTVRLNEGGERVV 137
Query: 139 DFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAA 198
F + +ATG+SP + G+ + Y + E +A PE + VIGSS + +E A
Sbjct: 138 MFDRCLVATGASP-AVPPIPGLKESPYWTSTE---ALASDTIPE-RLAVIGSSVVALELA 192
Query: 199 AFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDV 258
A VTV+ R + F+E +GE +T F ++G++ + S + V
Sbjct: 193 QAFARLGSKVTVLARNTLFFRED--PAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFV 250
Query: 259 TAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAG 316
+ AD ++V G NT LD GV +N Q A+V+++ + T+ P +YA
Sbjct: 251 LTTTHGE---LRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAA 307
Query: 317 GDIAYAP 323
GD P
Sbjct: 308 GDCTDQP 314
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 18/247 (7%)
Query: 635 DRVKLSKQLDIKADSIL-LRTEEFYKDND-IHVIKGKKIISDSELNEKKIKLQDGTS--I 690
DR KL Q + D + + E N I V+ G+ D + ++L +G +
Sbjct: 80 DRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQ--SLTVRLNEGGERVV 137
Query: 691 DFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAA 750
F + +ATG+SP + G+ + Y + E +A PE + VIGSS + +E A
Sbjct: 138 MFDRCLVATGASP-AVPPIPGLKESPYWTSTE---ALASDTIPE-RLAVIGSSVVALELA 192
Query: 751 AFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDV 810
A VTV+ R + F+E +GE +T F ++G++ + S + V
Sbjct: 193 QAFARLGSKVTVLARNTLFFRED--PAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFV 250
Query: 811 TAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAG 868
+ AD ++V G NT LD GV +N Q A+V+++ + T+ P +YA
Sbjct: 251 LTTTHGE---LRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAA 307
Query: 869 GDIAYAP 875
GD P
Sbjct: 308 GDCTDQP 314
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 18/247 (7%)
Query: 1106 DRVKLSKQLDIKADSIL-LRTEEFYKDND-IHVIKGKKIISDSELNEKKIKLQDGTS--I 1161
DR KL Q + D + + E N I V+ G+ D + ++L +G +
Sbjct: 80 DRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQ--SLTVRLNEGGERVV 137
Query: 1162 DFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAA 1221
F + +ATG+SP + G+ + Y + E +A PE + VIGSS + +E A
Sbjct: 138 MFDRCLVATGASP-AVPPIPGLKESPYWTSTE---ALASDTIPE-RLAVIGSSVVALELA 192
Query: 1222 AFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDV 1281
A VTV+ R + F+E +GE +T F ++G++ + S + V
Sbjct: 193 QAFARLGSKVTVLARNTLFFRED--PAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFV 250
Query: 1282 TAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAG 1339
+ AD ++V G NT LD GV +N Q A+V+++ + T+ P +YA
Sbjct: 251 LTTTHGE---LRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAA 307
Query: 1340 GDIAYAP 1346
GD P
Sbjct: 308 GDCTDQP 314
>pdb|1NHR|A Chain A, An L40c Mutation Converts The Cysteine-Sulfenic Acid Redox
Centre In Enterococcal Nadh Peroxidase To A Disulfide
Length = 447
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 144/321 (44%), Gaps = 23/321 (7%)
Query: 47 IVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKA---DSILLRTE 103
IV+G G VE L ++ + +F+ + + L+ K +S+ T
Sbjct: 4 IVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFCSCGMQLYLEGKVKDVNSVRYMTG 63
Query: 104 EFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTS-----IDFTKIYLATGSSPRTIS-QA 157
E + ++V +I + + E ++ ++D S ++ K+ ++ G+ P +
Sbjct: 64 EKMESRGVNVFSNTEITA-IQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPG 122
Query: 158 DGVNKVFYLRTVEDANNIAPH-ITPE-SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA 215
++ ++ +R + A + + PE +NVVVIGS +IG+EAA A K VTV+
Sbjct: 123 KDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 182
Query: 216 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 275
P L KE + +T+ E+ + V +E + + + + ADLV+
Sbjct: 183 RPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGR---VQKVVTDKNAYDADLVV 239
Query: 276 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD---IAYAPLHSFYNKNA 332
V +G NT +L G +EL+ + +EY+ T+ P V+A GD I Y P + N
Sbjct: 240 VAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVN--- 295
Query: 333 SIGHYQLAQYHGRIAALNMVE 353
I A+ GR A N+ E
Sbjct: 296 -IALATNARKQGRFAVKNLEE 315
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 144/321 (44%), Gaps = 23/321 (7%)
Query: 599 IVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKA---DSILLRTE 655
IV+G G VE L ++ + +F+ + + L+ K +S+ T
Sbjct: 4 IVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFCSCGMQLYLEGKVKDVNSVRYMTG 63
Query: 656 EFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTS-----IDFTKIYLATGSSPRTIS-QA 709
E + ++V +I + + E ++ ++D S ++ K+ ++ G+ P +
Sbjct: 64 EKMESRGVNVFSNTEITA-IQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPG 122
Query: 710 DGVNKVFYLRTVEDANNIAPH-ITPE-SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA 767
++ ++ +R + A + + PE +NVVVIGS +IG+EAA A K VTV+
Sbjct: 123 KDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 182
Query: 768 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 827
P L KE + +T+ E+ + V +E + + + + ADLV+
Sbjct: 183 RPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGR---VQKVVTDKNAYDADLVV 239
Query: 828 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD---IAYAPLHSFYNKNA 884
V +G NT +L G +EL+ + +EY+ T+ P V+A GD I Y P + N
Sbjct: 240 VAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVN--- 295
Query: 885 SIGHYQLAQYHGRIAALNMVE 905
I A+ GR A N+ E
Sbjct: 296 -IALATNARKQGRFAVKNLEE 315
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 144/321 (44%), Gaps = 23/321 (7%)
Query: 1070 IVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKA---DSILLRTE 1126
IV+G G VE L ++ + +F+ + + L+ K +S+ T
Sbjct: 4 IVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFCSCGMQLYLEGKVKDVNSVRYMTG 63
Query: 1127 EFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTS-----IDFTKIYLATGSSPRTIS-QA 1180
E + ++V +I + + E ++ ++D S ++ K+ ++ G+ P +
Sbjct: 64 EKMESRGVNVFSNTEITA-IQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPG 122
Query: 1181 DGVNKVFYLRTVEDANNIAPH-ITPE-SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA 1238
++ ++ +R + A + + PE +NVVVIGS +IG+EAA A K VTV+
Sbjct: 123 KDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 182
Query: 1239 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 1298
P L KE + +T+ E+ + V +E + + + + ADLV+
Sbjct: 183 RPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGR---VQKVVTDKNAYDADLVV 239
Query: 1299 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD---IAYAPLHSFYNKNA 1355
V +G NT +L G +EL+ + +EY+ T+ P V+A GD I Y P + N
Sbjct: 240 VAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVN--- 295
Query: 1356 SIGHYQLAQYHGRIAALNMVE 1376
I A+ GR A N+ E
Sbjct: 296 -IALATNARKQGRFAVKNLEE 315
>pdb|1NHP|A Chain A, Crystallographic Analyses Of Nadh Peroxidase Cys42ala And
Cys42ser Mutants: Active Site Structure, Mechanistic
Implications, And An Unusual Environment Of Arg303
Length = 447
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 144/321 (44%), Gaps = 23/321 (7%)
Query: 47 IVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKA---DSILLRTE 103
IV+G G VE L ++ + +F+ + + L+ K +S+ T
Sbjct: 4 IVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTG 63
Query: 104 EFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTS-----IDFTKIYLATGSSPRTIS-QA 157
E + ++V +I + + E ++ ++D S ++ K+ ++ G+ P +
Sbjct: 64 EKMESRGVNVFSNTEITA-IQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPG 122
Query: 158 DGVNKVFYLRTVEDANNIAPH-ITPE-SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA 215
++ ++ +R + A + + PE +NVVVIGS +IG+EAA A K VTV+
Sbjct: 123 KDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 182
Query: 216 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 275
P L KE + +T+ E+ + V +E + + + + ADLV+
Sbjct: 183 RPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGR---VQKVVTDKNAYDADLVV 239
Query: 276 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD---IAYAPLHSFYNKNA 332
V +G NT +L G +EL+ + +EY+ T+ P V+A GD I Y P + N
Sbjct: 240 VAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVN--- 295
Query: 333 SIGHYQLAQYHGRIAALNMVE 353
I A+ GR A N+ E
Sbjct: 296 -IALATNARKQGRFAVKNLEE 315
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 144/321 (44%), Gaps = 23/321 (7%)
Query: 599 IVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKA---DSILLRTE 655
IV+G G VE L ++ + +F+ + + L+ K +S+ T
Sbjct: 4 IVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTG 63
Query: 656 EFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTS-----IDFTKIYLATGSSPRTIS-QA 709
E + ++V +I + + E ++ ++D S ++ K+ ++ G+ P +
Sbjct: 64 EKMESRGVNVFSNTEITA-IQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPG 122
Query: 710 DGVNKVFYLRTVEDANNIAPH-ITPE-SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA 767
++ ++ +R + A + + PE +NVVVIGS +IG+EAA A K VTV+
Sbjct: 123 KDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 182
Query: 768 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 827
P L KE + +T+ E+ + V +E + + + + ADLV+
Sbjct: 183 RPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGR---VQKVVTDKNAYDADLVV 239
Query: 828 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD---IAYAPLHSFYNKNA 884
V +G NT +L G +EL+ + +EY+ T+ P V+A GD I Y P + N
Sbjct: 240 VAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVN--- 295
Query: 885 SIGHYQLAQYHGRIAALNMVE 905
I A+ GR A N+ E
Sbjct: 296 -IALATNARKQGRFAVKNLEE 315
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 144/321 (44%), Gaps = 23/321 (7%)
Query: 1070 IVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKA---DSILLRTE 1126
IV+G G VE L ++ + +F+ + + L+ K +S+ T
Sbjct: 4 IVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTG 63
Query: 1127 EFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTS-----IDFTKIYLATGSSPRTIS-QA 1180
E + ++V +I + + E ++ ++D S ++ K+ ++ G+ P +
Sbjct: 64 EKMESRGVNVFSNTEITA-IQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPG 122
Query: 1181 DGVNKVFYLRTVEDANNIAPH-ITPE-SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA 1238
++ ++ +R + A + + PE +NVVVIGS +IG+EAA A K VTV+
Sbjct: 123 KDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 182
Query: 1239 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 1298
P L KE + +T+ E+ + V +E + + + + ADLV+
Sbjct: 183 RPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGR---VQKVVTDKNAYDADLVV 239
Query: 1299 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD---IAYAPLHSFYNKNA 1355
V +G NT +L G +EL+ + +EY+ T+ P V+A GD I Y P + N
Sbjct: 240 VAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVN--- 295
Query: 1356 SIGHYQLAQYHGRIAALNMVE 1376
I A+ GR A N+ E
Sbjct: 296 -IALATNARKQGRFAVKNLEE 315
>pdb|1NHS|A Chain A, An L40c Mutation Converts The Cysteine-Sulfenic Acid Redox
Centre In Enterococcal Nadh Peroxidase To A Disulfide
Length = 447
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 24/255 (9%)
Query: 115 KGKKIISDSELN-----EKKIKLQDGTS-----IDFTKIYLATGSSPRTIS-QADGVNKV 163
+G + S++E+ E ++ ++D S ++ K+ ++ G+ P + ++ +
Sbjct: 69 RGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNI 128
Query: 164 FYLRTVEDANNIAPH-ITPE-SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQES 221
+ +R + A + + PE +NVVVIGS +IG+EAA A K VTV+ P
Sbjct: 129 YLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY 188
Query: 222 LGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV 281
L KE + +T+ E+ + V +E + + + + ADLV+V +G
Sbjct: 189 LDKEFTDVLTEEMEANNITIATGETVERYEGDGR---VQKVVTDKNAYDADLVVVAVGVR 245
Query: 282 LNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD---IAYAPLHSFYNKNASIGHYQ 338
NT +L G +EL+ + +EY+ T+ P V+A GD I Y P + N I
Sbjct: 246 PNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVN----IALAT 300
Query: 339 LAQYHGRIAALNMVE 353
A+ GR A N+ E
Sbjct: 301 NARKQGRFAVKNLEE 315
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 24/255 (9%)
Query: 667 KGKKIISDSELN-----EKKIKLQDGTS-----IDFTKIYLATGSSPRTIS-QADGVNKV 715
+G + S++E+ E ++ ++D S ++ K+ ++ G+ P + ++ +
Sbjct: 69 RGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNI 128
Query: 716 FYLRTVEDANNIAPH-ITPE-SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQES 773
+ +R + A + + PE +NVVVIGS +IG+EAA A K VTV+ P
Sbjct: 129 YLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY 188
Query: 774 LGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV 833
L KE + +T+ E+ + V +E + + + + ADLV+V +G
Sbjct: 189 LDKEFTDVLTEEMEANNITIATGETVERYEGDGR---VQKVVTDKNAYDADLVVVAVGVR 245
Query: 834 LNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD---IAYAPLHSFYNKNASIGHYQ 890
NT +L G +EL+ + +EY+ T+ P V+A GD I Y P + N I
Sbjct: 246 PNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVN----IALAT 300
Query: 891 LAQYHGRIAALNMVE 905
A+ GR A N+ E
Sbjct: 301 NARKQGRFAVKNLEE 315
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 24/255 (9%)
Query: 1138 KGKKIISDSELN-----EKKIKLQDGTS-----IDFTKIYLATGSSPRTIS-QADGVNKV 1186
+G + S++E+ E ++ ++D S ++ K+ ++ G+ P + ++ +
Sbjct: 69 RGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNI 128
Query: 1187 FYLRTVEDANNIAPH-ITPE-SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQES 1244
+ +R + A + + PE +NVVVIGS +IG+EAA A K VTV+ P
Sbjct: 129 YLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY 188
Query: 1245 LGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV 1304
L KE + +T+ E+ + V +E + + + + ADLV+V +G
Sbjct: 189 LDKEFTDVLTEEMEANNITIATGETVERYEGDGR---VQKVVTDKNAYDADLVVVAVGVR 245
Query: 1305 LNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD---IAYAPLHSFYNKNASIGHYQ 1361
NT +L G +EL+ + +EY+ T+ P V+A GD I Y P + N I
Sbjct: 246 PNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVN----IALAT 300
Query: 1362 LAQYHGRIAALNMVE 1376
A+ GR A N+ E
Sbjct: 301 NARKQGRFAVKNLEE 315
>pdb|1JOA|A Chain A, Nadh Peroxidase With Cysteine-Sulfenic Acid
pdb|1NPX|A Chain A, Structure Of Nadh Peroxidase From Streptococcus Faecalis
10c1 Refined At 2.16 Angstroms Resolution
pdb|2NPX|A Chain A, Nadh Binding Site And Catalysis Of Nadh Peroxidase
Length = 447
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 144/321 (44%), Gaps = 23/321 (7%)
Query: 47 IVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKA---DSILLRTE 103
IV+G G VE L ++ + +F+ + + L+ K +S+ T
Sbjct: 4 IVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSXGMQLYLEGKVKDVNSVRYMTG 63
Query: 104 EFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTS-----IDFTKIYLATGSSPRTIS-QA 157
E + ++V +I + + E ++ ++D S ++ K+ ++ G+ P +
Sbjct: 64 EKMESRGVNVFSNTEITA-IQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPG 122
Query: 158 DGVNKVFYLRTVEDANNIAPH-ITPE-SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA 215
++ ++ +R + A + + PE +NVVVIGS +IG+EAA A K VTV+
Sbjct: 123 KDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 182
Query: 216 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 275
P L KE + +T+ E+ + V +E + + + + ADLV+
Sbjct: 183 RPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGR---VQKVVTDKNAYDADLVV 239
Query: 276 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD---IAYAPLHSFYNKNA 332
V +G NT +L G +EL+ + +EY+ T+ P V+A GD I Y P + N
Sbjct: 240 VAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVN--- 295
Query: 333 SIGHYQLAQYHGRIAALNMVE 353
I A+ GR A N+ E
Sbjct: 296 -IALATNARKQGRFAVKNLEE 315
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 144/321 (44%), Gaps = 23/321 (7%)
Query: 599 IVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKA---DSILLRTE 655
IV+G G VE L ++ + +F+ + + L+ K +S+ T
Sbjct: 4 IVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSXGMQLYLEGKVKDVNSVRYMTG 63
Query: 656 EFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTS-----IDFTKIYLATGSSPRTIS-QA 709
E + ++V +I + + E ++ ++D S ++ K+ ++ G+ P +
Sbjct: 64 EKMESRGVNVFSNTEITA-IQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPG 122
Query: 710 DGVNKVFYLRTVEDANNIAPH-ITPE-SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA 767
++ ++ +R + A + + PE +NVVVIGS +IG+EAA A K VTV+
Sbjct: 123 KDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 182
Query: 768 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 827
P L KE + +T+ E+ + V +E + + + + ADLV+
Sbjct: 183 RPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGR---VQKVVTDKNAYDADLVV 239
Query: 828 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD---IAYAPLHSFYNKNA 884
V +G NT +L G +EL+ + +EY+ T+ P V+A GD I Y P + N
Sbjct: 240 VAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVN--- 295
Query: 885 SIGHYQLAQYHGRIAALNMVE 905
I A+ GR A N+ E
Sbjct: 296 -IALATNARKQGRFAVKNLEE 315
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 144/321 (44%), Gaps = 23/321 (7%)
Query: 1070 IVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKA---DSILLRTE 1126
IV+G G VE L ++ + +F+ + + L+ K +S+ T
Sbjct: 4 IVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSXGMQLYLEGKVKDVNSVRYMTG 63
Query: 1127 EFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTS-----IDFTKIYLATGSSPRTIS-QA 1180
E + ++V +I + + E ++ ++D S ++ K+ ++ G+ P +
Sbjct: 64 EKMESRGVNVFSNTEITA-IQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPG 122
Query: 1181 DGVNKVFYLRTVEDANNIAPH-ITPE-SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA 1238
++ ++ +R + A + + PE +NVVVIGS +IG+EAA A K VTV+
Sbjct: 123 KDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 182
Query: 1239 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 1298
P L KE + +T+ E+ + V +E + + + + ADLV+
Sbjct: 183 RPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGR---VQKVVTDKNAYDADLVV 239
Query: 1299 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD---IAYAPLHSFYNKNA 1355
V +G NT +L G +EL+ + +EY+ T+ P V+A GD I Y P + N
Sbjct: 240 VAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVN--- 295
Query: 1356 SIGHYQLAQYHGRIAALNMVE 1376
I A+ GR A N+ E
Sbjct: 296 -IALATNARKQGRFAVKNLEE 315
>pdb|1NHQ|A Chain A, Crystallographic Analyses Of Nadh Peroxidase Cys42ala And
Cys42ser Mutants: Active Site Structure, Mechanistic
Implications, And An Unusual Environment Of Arg303
Length = 447
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 24/255 (9%)
Query: 115 KGKKIISDSELN-----EKKIKLQDGTS-----IDFTKIYLATGSSPRTIS-QADGVNKV 163
+G + S++E+ E ++ ++D S ++ K+ ++ G+ P + ++ +
Sbjct: 69 RGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNI 128
Query: 164 FYLRTVEDANNIAPH-ITPE-SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQES 221
+ +R + A + + PE +NVVVIGS +IG+EAA A K VTV+ P
Sbjct: 129 YLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY 188
Query: 222 LGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV 281
L KE + +T+ E+ + V +E + + + + ADLV+V +G
Sbjct: 189 LDKEFTDVLTEEMEANNITIATGETVERYEGDGR---VQKVVTDKNAYDADLVVVAVGVR 245
Query: 282 LNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD---IAYAPLHSFYNKNASIGHYQ 338
NT +L G +EL+ + +EY+ T+ P V+A GD I Y P + N I
Sbjct: 246 PNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVN----IALAT 300
Query: 339 LAQYHGRIAALNMVE 353
A+ GR A N+ E
Sbjct: 301 NARKQGRFAVKNLEE 315
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 24/255 (9%)
Query: 667 KGKKIISDSELN-----EKKIKLQDGTS-----IDFTKIYLATGSSPRTIS-QADGVNKV 715
+G + S++E+ E ++ ++D S ++ K+ ++ G+ P + ++ +
Sbjct: 69 RGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNI 128
Query: 716 FYLRTVEDANNIAPH-ITPE-SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQES 773
+ +R + A + + PE +NVVVIGS +IG+EAA A K VTV+ P
Sbjct: 129 YLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY 188
Query: 774 LGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV 833
L KE + +T+ E+ + V +E + + + + ADLV+V +G
Sbjct: 189 LDKEFTDVLTEEMEANNITIATGETVERYEGDGR---VQKVVTDKNAYDADLVVVAVGVR 245
Query: 834 LNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD---IAYAPLHSFYNKNASIGHYQ 890
NT +L G +EL+ + +EY+ T+ P V+A GD I Y P + N I
Sbjct: 246 PNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVN----IALAT 300
Query: 891 LAQYHGRIAALNMVE 905
A+ GR A N+ E
Sbjct: 301 NARKQGRFAVKNLEE 315
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 24/255 (9%)
Query: 1138 KGKKIISDSELN-----EKKIKLQDGTS-----IDFTKIYLATGSSPRTIS-QADGVNKV 1186
+G + S++E+ E ++ ++D S ++ K+ ++ G+ P + ++ +
Sbjct: 69 RGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNI 128
Query: 1187 FYLRTVEDANNIAPH-ITPE-SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQES 1244
+ +R + A + + PE +NVVVIGS +IG+EAA A K VTV+ P
Sbjct: 129 YLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY 188
Query: 1245 LGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV 1304
L KE + +T+ E+ + V +E + + + + ADLV+V +G
Sbjct: 189 LDKEFTDVLTEEMEANNITIATGETVERYEGDGR---VQKVVTDKNAYDADLVVVAVGVR 245
Query: 1305 LNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD---IAYAPLHSFYNKNASIGHYQ 1361
NT +L G +EL+ + +EY+ T+ P V+A GD I Y P + N I
Sbjct: 246 PNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVN----IALAT 300
Query: 1362 LAQYHGRIAALNMVE 1376
A+ GR A N+ E
Sbjct: 301 NARKQGRFAVKNLEE 315
>pdb|1M6I|A Chain A, Crystal Structure Of Apoptosis Inducing Factor (Aif)
Length = 493
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 139/348 (39%), Gaps = 48/348 (13%)
Query: 60 ETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKAD-----------------SILLRT 102
++R ++ ++++ LPY R LSK+L D SI +
Sbjct: 28 RSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQP 87
Query: 103 EEFY---------KDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT 153
FY ++ + V+ GKK++ ++ + +KL DG+ I + K +ATG +PR+
Sbjct: 88 PSFYVSAQDLPHIENGGVAVLTGKKVVQ-LDVRDNMVKLNDGSQITYEKCLIATGGTPRS 146
Query: 154 ISQADGV-----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSV 208
+S D ++ R + D ++ ++ +IG F+G E A K +++
Sbjct: 147 LSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARAL 206
Query: 209 TVVGRGAVPFQESLGKEVGERITKLFESK----GVKFVMKANVSSFEKNEKNDVTAANLD 264
P + ++GK + E ++ K GVK + A V S + + L
Sbjct: 207 GTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLI--KLK 264
Query: 265 NGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQ-KAVVVNEYLETNVPGVYAGGDIAYAP 323
+G + D ++ +G N G+E++ VN L+ ++ GD A
Sbjct: 265 DGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQAR-SNIWVAGDAA--- 320
Query: 324 LHSFYN---KNASIGHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTML 368
FY+ + H+ A GR+A NM FW+ L
Sbjct: 321 --CFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDL 366
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 139/348 (39%), Gaps = 48/348 (13%)
Query: 612 ETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKAD-----------------SILLRT 654
++R ++ ++++ LPY R LSK+L D SI +
Sbjct: 28 RSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQP 87
Query: 655 EEFY---------KDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT 705
FY ++ + V+ GKK++ ++ + +KL DG+ I + K +ATG +PR+
Sbjct: 88 PSFYVSAQDLPHIENGGVAVLTGKKVVQ-LDVRDNMVKLNDGSQITYEKCLIATGGTPRS 146
Query: 706 ISQADGV-----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSV 760
+S D ++ R + D ++ ++ +IG F+G E A K +++
Sbjct: 147 LSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARAL 206
Query: 761 TVVGRGAVPFQESLGKEVGERITKLFESK----GVKFVMKANVSSFEKNEKNDVTAANLD 816
P + ++GK + E ++ K GVK + A V S + + L
Sbjct: 207 GTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLI--KLK 264
Query: 817 NGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQ-KAVVVNEYLETNVPGVYAGGDIAYAP 875
+G + D ++ +G N G+E++ VN L+ ++ GD A
Sbjct: 265 DGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQAR-SNIWVAGDAA--- 320
Query: 876 LHSFYN---KNASIGHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTML 920
FY+ + H+ A GR+A NM FW+ L
Sbjct: 321 --CFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDL 366
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 139/348 (39%), Gaps = 48/348 (13%)
Query: 1083 ETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKAD-----------------SILLRT 1125
++R ++ ++++ LPY R LSK+L D SI +
Sbjct: 28 RSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQP 87
Query: 1126 EEFY---------KDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT 1176
FY ++ + V+ GKK++ ++ + +KL DG+ I + K +ATG +PR+
Sbjct: 88 PSFYVSAQDLPHIENGGVAVLTGKKVVQ-LDVRDNMVKLNDGSQITYEKCLIATGGTPRS 146
Query: 1177 ISQADGV-----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSV 1231
+S D ++ R + D ++ ++ +IG F+G E A K +++
Sbjct: 147 LSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARAL 206
Query: 1232 TVVGRGAVPFQESLGKEVGERITKLFESK----GVKFVMKANVSSFEKNEKNDVTAANLD 1287
P + ++GK + E ++ K GVK + A V S + + L
Sbjct: 207 GTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLI--KLK 264
Query: 1288 NGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQ-KAVVVNEYLETNVPGVYAGGDIAYAP 1346
+G + D ++ +G N G+E++ VN L+ ++ GD A
Sbjct: 265 DGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQAR-SNIWVAGDAA--- 320
Query: 1347 LHSFYN---KNASIGHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTML 1391
FY+ + H+ A GR+A NM FW+ L
Sbjct: 321 --CFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDL 366
>pdb|1F8W|A Chain A, Crystal Structure Of Nadh Peroxidase Mutant: R303m
Length = 447
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 143/321 (44%), Gaps = 23/321 (7%)
Query: 47 IVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKA---DSILLRTE 103
IV+G G VE L ++ + +F+ + + L+ K +S+ T
Sbjct: 4 IVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSXGMQLYLEGKVKDVNSVRYMTG 63
Query: 104 EFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTS-----IDFTKIYLATGSSPRTIS-QA 157
E + ++V +I + + E ++ ++D S ++ K+ ++ G+ P +
Sbjct: 64 EKMESRGVNVFSNTEITA-IQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPG 122
Query: 158 DGVNKVFYLRTVEDANNIAPH-ITPE-SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA 215
++ ++ +R + A + + PE +NVVVIGS +IG+EAA A K VTV+
Sbjct: 123 KDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 182
Query: 216 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 275
P L KE + +T+ E+ + V +E + + + + ADLV+
Sbjct: 183 RPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGR---VQKVVTDKNAYDADLVV 239
Query: 276 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD---IAYAPLHSFYNKNA 332
V +G NT +L G +EL+ + +EY+ T+ P V+A GD I Y P + N
Sbjct: 240 VAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVN--- 295
Query: 333 SIGHYQLAQYHGRIAALNMVE 353
I A GR A N+ E
Sbjct: 296 -IALATNAMKQGRFAVKNLEE 315
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 143/321 (44%), Gaps = 23/321 (7%)
Query: 599 IVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKA---DSILLRTE 655
IV+G G VE L ++ + +F+ + + L+ K +S+ T
Sbjct: 4 IVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSXGMQLYLEGKVKDVNSVRYMTG 63
Query: 656 EFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTS-----IDFTKIYLATGSSPRTIS-QA 709
E + ++V +I + + E ++ ++D S ++ K+ ++ G+ P +
Sbjct: 64 EKMESRGVNVFSNTEITA-IQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPG 122
Query: 710 DGVNKVFYLRTVEDANNIAPH-ITPE-SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA 767
++ ++ +R + A + + PE +NVVVIGS +IG+EAA A K VTV+
Sbjct: 123 KDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 182
Query: 768 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 827
P L KE + +T+ E+ + V +E + + + + ADLV+
Sbjct: 183 RPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGR---VQKVVTDKNAYDADLVV 239
Query: 828 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD---IAYAPLHSFYNKNA 884
V +G NT +L G +EL+ + +EY+ T+ P V+A GD I Y P + N
Sbjct: 240 VAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVN--- 295
Query: 885 SIGHYQLAQYHGRIAALNMVE 905
I A GR A N+ E
Sbjct: 296 -IALATNAMKQGRFAVKNLEE 315
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 143/321 (44%), Gaps = 23/321 (7%)
Query: 1070 IVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKA---DSILLRTE 1126
IV+G G VE L ++ + +F+ + + L+ K +S+ T
Sbjct: 4 IVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSXGMQLYLEGKVKDVNSVRYMTG 63
Query: 1127 EFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTS-----IDFTKIYLATGSSPRTIS-QA 1180
E + ++V +I + + E ++ ++D S ++ K+ ++ G+ P +
Sbjct: 64 EKMESRGVNVFSNTEITA-IQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPG 122
Query: 1181 DGVNKVFYLRTVEDANNIAPH-ITPE-SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA 1238
++ ++ +R + A + + PE +NVVVIGS +IG+EAA A K VTV+
Sbjct: 123 KDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 182
Query: 1239 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 1298
P L KE + +T+ E+ + V +E + + + + ADLV+
Sbjct: 183 RPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGR---VQKVVTDKNAYDADLVV 239
Query: 1299 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD---IAYAPLHSFYNKNA 1355
V +G NT +L G +EL+ + +EY+ T+ P V+A GD I Y P + N
Sbjct: 240 VAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVN--- 295
Query: 1356 SIGHYQLAQYHGRIAALNMVE 1376
I A GR A N+ E
Sbjct: 296 -IALATNAMKQGRFAVKNLEE 315
>pdb|4FDC|B Chain B, Crystal Structure Of The E493v Mutant Of Human Apoptosis
Inducing Factor (Aif)
Length = 514
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 139/348 (39%), Gaps = 48/348 (13%)
Query: 60 ETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKAD-----------------SILLRT 102
++R ++ ++++ LPY R LSK+L D SI +
Sbjct: 46 RSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQP 105
Query: 103 EEFY---------KDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT 153
FY ++ + V+ GKK++ ++ + +KL DG+ I + K +ATG +PR+
Sbjct: 106 PSFYVSAQDLPHIENGGVAVLTGKKVVQ-LDVRDNMVKLNDGSQITYEKCLIATGGTPRS 164
Query: 154 ISQADGV-----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSV 208
+S D ++ R + D ++ ++ +IG F+G E A K +++
Sbjct: 165 LSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARAL 224
Query: 209 TVVGRGAVPFQESLGKEVGERITKLFESK----GVKFVMKANVSSFEKNEKNDVTAANLD 264
P + ++GK + E ++ K GVK + A V S + + L
Sbjct: 225 GTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLI--KLK 282
Query: 265 NGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQ-KAVVVNEYLETNVPGVYAGGDIAYAP 323
+G + D ++ +G N G+E++ VN L+ ++ GD A
Sbjct: 283 DGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQARS-NIWVAGDAA--- 338
Query: 324 LHSFYN---KNASIGHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTML 368
FY+ + H+ A GR+A NM FW+ L
Sbjct: 339 --CFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDL 384
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 139/348 (39%), Gaps = 48/348 (13%)
Query: 612 ETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKAD-----------------SILLRT 654
++R ++ ++++ LPY R LSK+L D SI +
Sbjct: 46 RSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQP 105
Query: 655 EEFY---------KDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT 705
FY ++ + V+ GKK++ ++ + +KL DG+ I + K +ATG +PR+
Sbjct: 106 PSFYVSAQDLPHIENGGVAVLTGKKVVQ-LDVRDNMVKLNDGSQITYEKCLIATGGTPRS 164
Query: 706 ISQADGV-----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSV 760
+S D ++ R + D ++ ++ +IG F+G E A K +++
Sbjct: 165 LSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARAL 224
Query: 761 TVVGRGAVPFQESLGKEVGERITKLFESK----GVKFVMKANVSSFEKNEKNDVTAANLD 816
P + ++GK + E ++ K GVK + A V S + + L
Sbjct: 225 GTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLI--KLK 282
Query: 817 NGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQ-KAVVVNEYLETNVPGVYAGGDIAYAP 875
+G + D ++ +G N G+E++ VN L+ ++ GD A
Sbjct: 283 DGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQARS-NIWVAGDAA--- 338
Query: 876 LHSFYN---KNASIGHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTML 920
FY+ + H+ A GR+A NM FW+ L
Sbjct: 339 --CFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDL 384
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 139/348 (39%), Gaps = 48/348 (13%)
Query: 1083 ETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKAD-----------------SILLRT 1125
++R ++ ++++ LPY R LSK+L D SI +
Sbjct: 46 RSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQP 105
Query: 1126 EEFY---------KDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT 1176
FY ++ + V+ GKK++ ++ + +KL DG+ I + K +ATG +PR+
Sbjct: 106 PSFYVSAQDLPHIENGGVAVLTGKKVVQ-LDVRDNMVKLNDGSQITYEKCLIATGGTPRS 164
Query: 1177 ISQADGV-----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSV 1231
+S D ++ R + D ++ ++ +IG F+G E A K +++
Sbjct: 165 LSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARAL 224
Query: 1232 TVVGRGAVPFQESLGKEVGERITKLFESK----GVKFVMKANVSSFEKNEKNDVTAANLD 1287
P + ++GK + E ++ K GVK + A V S + + L
Sbjct: 225 GTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLI--KLK 282
Query: 1288 NGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQ-KAVVVNEYLETNVPGVYAGGDIAYAP 1346
+G + D ++ +G N G+E++ VN L+ ++ GD A
Sbjct: 283 DGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQARS-NIWVAGDAA--- 338
Query: 1347 LHSFYN---KNASIGHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTML 1391
FY+ + H+ A GR+A NM FW+ L
Sbjct: 339 --CFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDL 384
>pdb|1EBD|A Chain A, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
pdb|1EBD|B Chain B, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
Length = 455
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 147/346 (42%), Gaps = 69/346 (19%)
Query: 47 IVVGGGPSGATCVETLRQNGFTGKLYFITDENF---------LP----------YDRVKL 87
+VVG GP G V +R K+ + N +P Y++ K
Sbjct: 7 LVVGAGPGG--YVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKH 64
Query: 88 SKQLDIKADSILLR------------------TEEFYKDNDIHVIKGKKIISDSELNEKK 129
S+++ IKA+++ + E K N + ++KG+ D+
Sbjct: 65 SEEMGIKAENVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDA----NT 120
Query: 130 IKLQDGTSID---FTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVV 186
+++ +G S F +ATGS P + N F R ++ + P+S +V
Sbjct: 121 VRVVNGDSAQTYTFKNAIIATGSRPIELP-----NFKFSNRILDSTGALNLGEVPKS-LV 174
Query: 187 VIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKAN 246
VIG +IG+E A+ VT++ GA K++ I K + KGV+ V A
Sbjct: 175 VIGGGYIGIELGTAYANFGTKVTIL-EGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNAL 233
Query: 247 VSSFEKNEKNDVTAANLDNGTT--IPADLVIVGIGTVLNTNYL--DGKGVELNGQKAVVV 302
E+ E + VT NG T I AD V+V +G NT+ L + G+++ + + V
Sbjct: 234 AKGAEERE-DGVTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEV 292
Query: 303 NEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAA 348
++ T+VP ++A GDI P ++ H A Y G++AA
Sbjct: 293 DQQCRTSVPNIFAIGDIVPGP---------ALAHK--ASYEGKVAA 327
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 147/346 (42%), Gaps = 69/346 (19%)
Query: 599 IVVGGGPSGATCVETLRQNGFTGKLYFITDENF---------LP----------YDRVKL 639
+VVG GP G V +R K+ + N +P Y++ K
Sbjct: 7 LVVGAGPGG--YVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKH 64
Query: 640 SKQLDIKADSILLR------------------TEEFYKDNDIHVIKGKKIISDSELNEKK 681
S+++ IKA+++ + E K N + ++KG+ D+
Sbjct: 65 SEEMGIKAENVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDA----NT 120
Query: 682 IKLQDGTSID---FTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVV 738
+++ +G S F +ATGS P + N F R ++ + P+S +V
Sbjct: 121 VRVVNGDSAQTYTFKNAIIATGSRPIELP-----NFKFSNRILDSTGALNLGEVPKS-LV 174
Query: 739 VIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKAN 798
VIG +IG+E A+ VT++ GA K++ I K + KGV+ V A
Sbjct: 175 VIGGGYIGIELGTAYANFGTKVTIL-EGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNAL 233
Query: 799 VSSFEKNEKNDVTAANLDNGTT--IPADLVIVGIGTVLNTNYL--DGKGVELNGQKAVVV 854
E+ E + VT NG T I AD V+V +G NT+ L + G+++ + + V
Sbjct: 234 AKGAEERE-DGVTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEV 292
Query: 855 NEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAA 900
++ T+VP ++A GDI P ++ H A Y G++AA
Sbjct: 293 DQQCRTSVPNIFAIGDIVPGP---------ALAHK--ASYEGKVAA 327
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 147/346 (42%), Gaps = 69/346 (19%)
Query: 1070 IVVGGGPSGATCVETLRQNGFTGKLYFITDENF---------LP----------YDRVKL 1110
+VVG GP G V +R K+ + N +P Y++ K
Sbjct: 7 LVVGAGPGG--YVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKH 64
Query: 1111 SKQLDIKADSILLR------------------TEEFYKDNDIHVIKGKKIISDSELNEKK 1152
S+++ IKA+++ + E K N + ++KG+ D+
Sbjct: 65 SEEMGIKAENVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDA----NT 120
Query: 1153 IKLQDGTSID---FTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVV 1209
+++ +G S F +ATGS P + N F R ++ + P+S +V
Sbjct: 121 VRVVNGDSAQTYTFKNAIIATGSRPIELP-----NFKFSNRILDSTGALNLGEVPKS-LV 174
Query: 1210 VIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKAN 1269
VIG +IG+E A+ VT++ GA K++ I K + KGV+ V A
Sbjct: 175 VIGGGYIGIELGTAYANFGTKVTIL-EGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNAL 233
Query: 1270 VSSFEKNEKNDVTAANLDNGTT--IPADLVIVGIGTVLNTNYL--DGKGVELNGQKAVVV 1325
E+ E + VT NG T I AD V+V +G NT+ L + G+++ + + V
Sbjct: 234 AKGAEERE-DGVTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEV 292
Query: 1326 NEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAA 1371
++ T+VP ++A GDI P ++ H A Y G++AA
Sbjct: 293 DQQCRTSVPNIFAIGDIVPGP---------ALAHK--ASYEGKVAA 327
>pdb|1GV4|A Chain A, Murine Apoptosis-Inducing Factor (Aif)
pdb|1GV4|B Chain B, Murine Apoptosis-Inducing Factor (Aif)
Length = 528
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 136/348 (39%), Gaps = 48/348 (13%)
Query: 60 ETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKAD-----------------SILLRT 102
++R ++ ++++ LPY R LSK+L D SI +
Sbjct: 65 RSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLQFRQWNGKERSIYFQP 124
Query: 103 EEFY---------KDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT 153
FY ++ + V+ GKK++ ++ +KL DG+ I F K +ATG +PR+
Sbjct: 125 PSFYVSAQDLPNIENGGVAVLTGKKVVH-LDVRGNMVKLNDGSQITFEKCLIATGGTPRS 183
Query: 154 ISQADGV-----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSV 208
+S D ++ R + D + ++ VIG F+G E A K ++
Sbjct: 184 LSAIDRAGAEVKSRTTLFRKIGDFRALEKISREVKSITVIGGGFLGSELACALGRKSQAS 243
Query: 209 TVVGRGAVPFQESLGKEVGERITKL----FESKGVKFVMKANVSSFEKNEKNDVTAANLD 264
+ P + ++GK + + ++ + +GVK + A V S L
Sbjct: 244 GIEVIQLFPEKGNMGKILPQYLSNWTMEKVKREGVKVMPNAIVQSV--GVSGGRLLIKLK 301
Query: 265 NGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQ-KAVVVNEYLETNVPGVYAGGDIAYAP 323
+G + D ++ +G N G+E++ VN L+ ++ GD A
Sbjct: 302 DGRKVETDHIVTAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQAR-SNIWVAGDAA--- 357
Query: 324 LHSFYN---KNASIGHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTML 368
FY+ + H+ A GR+A NM FW+ L
Sbjct: 358 --CFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDL 403
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 136/348 (39%), Gaps = 48/348 (13%)
Query: 612 ETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKAD-----------------SILLRT 654
++R ++ ++++ LPY R LSK+L D SI +
Sbjct: 65 RSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLQFRQWNGKERSIYFQP 124
Query: 655 EEFY---------KDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT 705
FY ++ + V+ GKK++ ++ +KL DG+ I F K +ATG +PR+
Sbjct: 125 PSFYVSAQDLPNIENGGVAVLTGKKVVH-LDVRGNMVKLNDGSQITFEKCLIATGGTPRS 183
Query: 706 ISQADGV-----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSV 760
+S D ++ R + D + ++ VIG F+G E A K ++
Sbjct: 184 LSAIDRAGAEVKSRTTLFRKIGDFRALEKISREVKSITVIGGGFLGSELACALGRKSQAS 243
Query: 761 TVVGRGAVPFQESLGKEVGERITKL----FESKGVKFVMKANVSSFEKNEKNDVTAANLD 816
+ P + ++GK + + ++ + +GVK + A V S L
Sbjct: 244 GIEVIQLFPEKGNMGKILPQYLSNWTMEKVKREGVKVMPNAIVQSV--GVSGGRLLIKLK 301
Query: 817 NGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQ-KAVVVNEYLETNVPGVYAGGDIAYAP 875
+G + D ++ +G N G+E++ VN L+ ++ GD A
Sbjct: 302 DGRKVETDHIVTAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQAR-SNIWVAGDAA--- 357
Query: 876 LHSFYN---KNASIGHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTML 920
FY+ + H+ A GR+A NM FW+ L
Sbjct: 358 --CFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDL 403
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 136/348 (39%), Gaps = 48/348 (13%)
Query: 1083 ETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKAD-----------------SILLRT 1125
++R ++ ++++ LPY R LSK+L D SI +
Sbjct: 65 RSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLQFRQWNGKERSIYFQP 124
Query: 1126 EEFY---------KDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT 1176
FY ++ + V+ GKK++ ++ +KL DG+ I F K +ATG +PR+
Sbjct: 125 PSFYVSAQDLPNIENGGVAVLTGKKVVH-LDVRGNMVKLNDGSQITFEKCLIATGGTPRS 183
Query: 1177 ISQADGV-----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSV 1231
+S D ++ R + D + ++ VIG F+G E A K ++
Sbjct: 184 LSAIDRAGAEVKSRTTLFRKIGDFRALEKISREVKSITVIGGGFLGSELACALGRKSQAS 243
Query: 1232 TVVGRGAVPFQESLGKEVGERITKL----FESKGVKFVMKANVSSFEKNEKNDVTAANLD 1287
+ P + ++GK + + ++ + +GVK + A V S L
Sbjct: 244 GIEVIQLFPEKGNMGKILPQYLSNWTMEKVKREGVKVMPNAIVQSV--GVSGGRLLIKLK 301
Query: 1288 NGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQ-KAVVVNEYLETNVPGVYAGGDIAYAP 1346
+G + D ++ +G N G+E++ VN L+ ++ GD A
Sbjct: 302 DGRKVETDHIVTAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQAR-SNIWVAGDAA--- 357
Query: 1347 LHSFYN---KNASIGHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTML 1391
FY+ + H+ A GR+A NM FW+ L
Sbjct: 358 --CFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDL 403
>pdb|1DXL|A Chain A, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|B Chain B, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|C Chain C, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|D Chain D, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
Length = 470
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 116/238 (48%), Gaps = 14/238 (5%)
Query: 94 KADSILLR-TEEFYKDNDIHVIKG-KKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSP 151
KA S L R E +K N + +KG K +S SE++ I+ ++ T + I +ATGS
Sbjct: 93 KAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGEN-TVVKGKHIIIATGSDV 151
Query: 152 RTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVV 211
+++ GV + + V +A P+ +VVIG+ +IG+E + VTVV
Sbjct: 152 KSLP---GVT-IDEKKIVSSTGALALSEIPK-KLVVIGAGYIGLEMGSVWGRIGSEVTVV 206
Query: 212 GRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNE---KNDVTAANLDNGTT 268
A ++ E+ ++ + E +G+KF +K V + + K V + T
Sbjct: 207 -EFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTI 265
Query: 269 IPADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPL 324
I AD+V+V G T+ LD GVE + ++VNE TNV GVYA GD+ P+
Sbjct: 266 IEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNVSGVYAIGDVIPGPM 323
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 116/238 (48%), Gaps = 14/238 (5%)
Query: 646 KADSILLR-TEEFYKDNDIHVIKG-KKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSP 703
KA S L R E +K N + +KG K +S SE++ I+ ++ T + I +ATGS
Sbjct: 93 KAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGEN-TVVKGKHIIIATGSDV 151
Query: 704 RTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVV 763
+++ GV + + V +A P+ +VVIG+ +IG+E + VTVV
Sbjct: 152 KSLP---GVT-IDEKKIVSSTGALALSEIPK-KLVVIGAGYIGLEMGSVWGRIGSEVTVV 206
Query: 764 GRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNE---KNDVTAANLDNGTT 820
A ++ E+ ++ + E +G+KF +K V + + K V + T
Sbjct: 207 -EFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTI 265
Query: 821 IPADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPL 876
I AD+V+V G T+ LD GVE + ++VNE TNV GVYA GD+ P+
Sbjct: 266 IEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNVSGVYAIGDVIPGPM 323
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 116/238 (48%), Gaps = 14/238 (5%)
Query: 1117 KADSILLR-TEEFYKDNDIHVIKG-KKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSP 1174
KA S L R E +K N + +KG K +S SE++ I+ ++ T + I +ATGS
Sbjct: 93 KAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGEN-TVVKGKHIIIATGSDV 151
Query: 1175 RTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVV 1234
+++ GV + + V +A P+ +VVIG+ +IG+E + VTVV
Sbjct: 152 KSLP---GVT-IDEKKIVSSTGALALSEIPK-KLVVIGAGYIGLEMGSVWGRIGSEVTVV 206
Query: 1235 GRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNE---KNDVTAANLDNGTT 1291
A ++ E+ ++ + E +G+KF +K V + + K V + T
Sbjct: 207 -EFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTI 265
Query: 1292 IPADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPL 1347
I AD+V+V G T+ LD GVE + ++VNE TNV GVYA GD+ P+
Sbjct: 266 IEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNVSGVYAIGDVIPGPM 323
>pdb|3GD3|A Chain A, Crystal Structure Of A Naturally Folded Murine Apoptosis
Inducing Factor
pdb|3GD3|B Chain B, Crystal Structure Of A Naturally Folded Murine Apoptosis
Inducing Factor
pdb|3GD3|C Chain C, Crystal Structure Of A Naturally Folded Murine Apoptosis
Inducing Factor
pdb|3GD3|D Chain D, Crystal Structure Of A Naturally Folded Murine Apoptosis
Inducing Factor
Length = 535
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 136/348 (39%), Gaps = 48/348 (13%)
Query: 60 ETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKAD-----------------SILLRT 102
++R ++ ++++ LPY R LSK+L D SI +
Sbjct: 70 RSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLQFRQWNGKERSIYFQP 129
Query: 103 EEFY---------KDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT 153
FY ++ + V+ GKK++ ++ +KL DG+ I F K +ATG +PR+
Sbjct: 130 PSFYVSAQDLPNIENGGVAVLTGKKVVH-LDVRGNMVKLNDGSQITFEKCLIATGGTPRS 188
Query: 154 ISQADGV-----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSV 208
+S D ++ R + D + ++ VIG F+G E A K ++
Sbjct: 189 LSAIDRAGAEVKSRTTLFRKIGDFRALEKISREVKSITVIGGGFLGSELACALGRKSQAS 248
Query: 209 TVVGRGAVPFQESLGKEVGERITKL----FESKGVKFVMKANVSSFEKNEKNDVTAANLD 264
+ P + ++GK + + ++ + +GVK + A V S L
Sbjct: 249 GIEVIQLFPEKGNMGKILPQYLSNWTMEKVKREGVKVMPNAIVQSV--GVSGGRLLIKLK 306
Query: 265 NGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQ-KAVVVNEYLETNVPGVYAGGDIAYAP 323
+G + D ++ +G N G+E++ VN L+ ++ GD A
Sbjct: 307 DGRKVETDHIVTAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQAR-SNIWVAGDAA--- 362
Query: 324 LHSFYN---KNASIGHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTML 368
FY+ + H+ A GR+A NM FW+ L
Sbjct: 363 --CFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDL 408
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 136/348 (39%), Gaps = 48/348 (13%)
Query: 612 ETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKAD-----------------SILLRT 654
++R ++ ++++ LPY R LSK+L D SI +
Sbjct: 70 RSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLQFRQWNGKERSIYFQP 129
Query: 655 EEFY---------KDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT 705
FY ++ + V+ GKK++ ++ +KL DG+ I F K +ATG +PR+
Sbjct: 130 PSFYVSAQDLPNIENGGVAVLTGKKVVH-LDVRGNMVKLNDGSQITFEKCLIATGGTPRS 188
Query: 706 ISQADGV-----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSV 760
+S D ++ R + D + ++ VIG F+G E A K ++
Sbjct: 189 LSAIDRAGAEVKSRTTLFRKIGDFRALEKISREVKSITVIGGGFLGSELACALGRKSQAS 248
Query: 761 TVVGRGAVPFQESLGKEVGERITKL----FESKGVKFVMKANVSSFEKNEKNDVTAANLD 816
+ P + ++GK + + ++ + +GVK + A V S L
Sbjct: 249 GIEVIQLFPEKGNMGKILPQYLSNWTMEKVKREGVKVMPNAIVQSV--GVSGGRLLIKLK 306
Query: 817 NGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQ-KAVVVNEYLETNVPGVYAGGDIAYAP 875
+G + D ++ +G N G+E++ VN L+ ++ GD A
Sbjct: 307 DGRKVETDHIVTAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQAR-SNIWVAGDAA--- 362
Query: 876 LHSFYN---KNASIGHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTML 920
FY+ + H+ A GR+A NM FW+ L
Sbjct: 363 --CFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDL 408
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 136/348 (39%), Gaps = 48/348 (13%)
Query: 1083 ETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKAD-----------------SILLRT 1125
++R ++ ++++ LPY R LSK+L D SI +
Sbjct: 70 RSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLQFRQWNGKERSIYFQP 129
Query: 1126 EEFY---------KDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT 1176
FY ++ + V+ GKK++ ++ +KL DG+ I F K +ATG +PR+
Sbjct: 130 PSFYVSAQDLPNIENGGVAVLTGKKVVH-LDVRGNMVKLNDGSQITFEKCLIATGGTPRS 188
Query: 1177 ISQADGV-----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSV 1231
+S D ++ R + D + ++ VIG F+G E A K ++
Sbjct: 189 LSAIDRAGAEVKSRTTLFRKIGDFRALEKISREVKSITVIGGGFLGSELACALGRKSQAS 248
Query: 1232 TVVGRGAVPFQESLGKEVGERITKL----FESKGVKFVMKANVSSFEKNEKNDVTAANLD 1287
+ P + ++GK + + ++ + +GVK + A V S L
Sbjct: 249 GIEVIQLFPEKGNMGKILPQYLSNWTMEKVKREGVKVMPNAIVQSV--GVSGGRLLIKLK 306
Query: 1288 NGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQ-KAVVVNEYLETNVPGVYAGGDIAYAP 1346
+G + D ++ +G N G+E++ VN L+ ++ GD A
Sbjct: 307 DGRKVETDHIVTAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQAR-SNIWVAGDAA--- 362
Query: 1347 LHSFYN---KNASIGHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTML 1391
FY+ + H+ A GR+A NM FW+ L
Sbjct: 363 --CFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDL 408
>pdb|3GD4|A Chain A, Crystal Structure Of The Reduced, Nad-Bound Form Of Murine
Apoptosis Inducing Factor
pdb|3GD4|B Chain B, Crystal Structure Of The Reduced, Nad-Bound Form Of Murine
Apoptosis Inducing Factor
Length = 511
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 136/348 (39%), Gaps = 48/348 (13%)
Query: 60 ETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKAD-----------------SILLRT 102
++R ++ ++++ LPY R LSK+L D SI +
Sbjct: 46 RSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLQFRQWNGKERSIYFQP 105
Query: 103 EEFY---------KDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT 153
FY ++ + V+ GKK++ ++ +KL DG+ I F K +ATG +PR+
Sbjct: 106 PSFYVSAQDLPNIENGGVAVLTGKKVVH-LDVRGNMVKLNDGSQITFEKCLIATGGTPRS 164
Query: 154 ISQADGV-----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSV 208
+S D ++ R + D + ++ VIG F+G E A K ++
Sbjct: 165 LSAIDRAGAEVKSRTTLFRKIGDFRALEKISREVKSITVIGGGFLGSELACALGRKSQAS 224
Query: 209 TVVGRGAVPFQESLGKEVGERITKL----FESKGVKFVMKANVSSFEKNEKNDVTAANLD 264
+ P + ++GK + + ++ + +GVK + A V S L
Sbjct: 225 GIEVIQLFPEKGNMGKILPQYLSNWTMEKVKREGVKVMPNAIVQSV--GVSGGRLLIKLK 282
Query: 265 NGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQ-KAVVVNEYLETNVPGVYAGGDIAYAP 323
+G + D ++ +G N G+E++ VN L+ ++ GD A
Sbjct: 283 DGRKVETDHIVTAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQAR-SNIWVAGDAA--- 338
Query: 324 LHSFYN---KNASIGHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTML 368
FY+ + H+ A GR+A NM FW+ L
Sbjct: 339 --CFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDL 384
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 136/348 (39%), Gaps = 48/348 (13%)
Query: 612 ETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKAD-----------------SILLRT 654
++R ++ ++++ LPY R LSK+L D SI +
Sbjct: 46 RSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLQFRQWNGKERSIYFQP 105
Query: 655 EEFY---------KDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT 705
FY ++ + V+ GKK++ ++ +KL DG+ I F K +ATG +PR+
Sbjct: 106 PSFYVSAQDLPNIENGGVAVLTGKKVVH-LDVRGNMVKLNDGSQITFEKCLIATGGTPRS 164
Query: 706 ISQADGV-----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSV 760
+S D ++ R + D + ++ VIG F+G E A K ++
Sbjct: 165 LSAIDRAGAEVKSRTTLFRKIGDFRALEKISREVKSITVIGGGFLGSELACALGRKSQAS 224
Query: 761 TVVGRGAVPFQESLGKEVGERITKL----FESKGVKFVMKANVSSFEKNEKNDVTAANLD 816
+ P + ++GK + + ++ + +GVK + A V S L
Sbjct: 225 GIEVIQLFPEKGNMGKILPQYLSNWTMEKVKREGVKVMPNAIVQSV--GVSGGRLLIKLK 282
Query: 817 NGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQ-KAVVVNEYLETNVPGVYAGGDIAYAP 875
+G + D ++ +G N G+E++ VN L+ ++ GD A
Sbjct: 283 DGRKVETDHIVTAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQAR-SNIWVAGDAA--- 338
Query: 876 LHSFYN---KNASIGHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTML 920
FY+ + H+ A GR+A NM FW+ L
Sbjct: 339 --CFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDL 384
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 136/348 (39%), Gaps = 48/348 (13%)
Query: 1083 ETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKAD-----------------SILLRT 1125
++R ++ ++++ LPY R LSK+L D SI +
Sbjct: 46 RSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLQFRQWNGKERSIYFQP 105
Query: 1126 EEFY---------KDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT 1176
FY ++ + V+ GKK++ ++ +KL DG+ I F K +ATG +PR+
Sbjct: 106 PSFYVSAQDLPNIENGGVAVLTGKKVVH-LDVRGNMVKLNDGSQITFEKCLIATGGTPRS 164
Query: 1177 ISQADGV-----NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSV 1231
+S D ++ R + D + ++ VIG F+G E A K ++
Sbjct: 165 LSAIDRAGAEVKSRTTLFRKIGDFRALEKISREVKSITVIGGGFLGSELACALGRKSQAS 224
Query: 1232 TVVGRGAVPFQESLGKEVGERITKL----FESKGVKFVMKANVSSFEKNEKNDVTAANLD 1287
+ P + ++GK + + ++ + +GVK + A V S L
Sbjct: 225 GIEVIQLFPEKGNMGKILPQYLSNWTMEKVKREGVKVMPNAIVQSV--GVSGGRLLIKLK 282
Query: 1288 NGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQ-KAVVVNEYLETNVPGVYAGGDIAYAP 1346
+G + D ++ +G N G+E++ VN L+ ++ GD A
Sbjct: 283 DGRKVETDHIVTAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQAR-SNIWVAGDAA--- 338
Query: 1347 LHSFYN---KNASIGHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTML 1391
FY+ + H+ A GR+A NM FW+ L
Sbjct: 339 --CFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDL 384
>pdb|3O0H|A Chain A, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
pdb|3O0H|B Chain B, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
Length = 484
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 111/226 (49%), Gaps = 20/226 (8%)
Query: 101 RTEEFYKD----NDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQ 156
R E Y++ +++H+ + + + D E + G I KI +ATG+ + S
Sbjct: 115 RLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVT---GERISAEKILIATGAKIVSNSA 171
Query: 157 ADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGME-AAAFCASKVKSVTVVGRGA 215
G + + D + P+S +V++G +IG+E A F VK+ T++ RG
Sbjct: 172 IKGSDLCLTSNEIFDLEKL-----PKS-IVIVGGGYIGVEFANIFHGLGVKT-TLLHRGD 224
Query: 216 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 275
+ + + ++ + + +KG+ + +A VS + E + L NG TI AD V+
Sbjct: 225 LILR-NFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTE--NCYNVVLTNGQTICADRVM 281
Query: 276 VGIGTVLNTNYL--DGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 319
+ G V NT L + GV++N AVVV+E + TNV ++A GD+
Sbjct: 282 LATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDV 327
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 111/226 (49%), Gaps = 20/226 (8%)
Query: 653 RTEEFYKD----NDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQ 708
R E Y++ +++H+ + + + D E + G I KI +ATG+ + S
Sbjct: 115 RLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVT---GERISAEKILIATGAKIVSNSA 171
Query: 709 ADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGME-AAAFCASKVKSVTVVGRGA 767
G + + D + P+S +V++G +IG+E A F VK+ T++ RG
Sbjct: 172 IKGSDLCLTSNEIFDLEKL-----PKS-IVIVGGGYIGVEFANIFHGLGVKT-TLLHRGD 224
Query: 768 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 827
+ + + ++ + + +KG+ + +A VS + E + L NG TI AD V+
Sbjct: 225 LILR-NFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTE--NCYNVVLTNGQTICADRVM 281
Query: 828 VGIGTVLNTNYL--DGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 871
+ G V NT L + GV++N AVVV+E + TNV ++A GD+
Sbjct: 282 LATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDV 327
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 111/226 (49%), Gaps = 20/226 (8%)
Query: 1124 RTEEFYKD----NDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQ 1179
R E Y++ +++H+ + + + D E + G I KI +ATG+ + S
Sbjct: 115 RLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVT---GERISAEKILIATGAKIVSNSA 171
Query: 1180 ADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGME-AAAFCASKVKSVTVVGRGA 1238
G + + D + P+S +V++G +IG+E A F VK+ T++ RG
Sbjct: 172 IKGSDLCLTSNEIFDLEKL-----PKS-IVIVGGGYIGVEFANIFHGLGVKT-TLLHRGD 224
Query: 1239 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 1298
+ + + ++ + + +KG+ + +A VS + E + L NG TI AD V+
Sbjct: 225 LILR-NFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTE--NCYNVVLTNGQTICADRVM 281
Query: 1299 VGIGTVLNTNYL--DGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 1342
+ G V NT L + GV++N AVVV+E + TNV ++A GD+
Sbjct: 282 LATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDV 327
>pdb|2EQ7|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2EQ7|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2YQU|A Chain A, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
pdb|2YQU|B Chain B, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
Length = 455
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 83/347 (23%), Positives = 148/347 (42%), Gaps = 46/347 (13%)
Query: 125 LNEKKIKLQD-GTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPES 183
L+E+K+ +++ G ++ I +ATGS+P A +V Y R V ++ P+
Sbjct: 114 LSERKVLVEETGEELEARYILIATGSAPLIPPWA----QVDYERVVTSTEALSFPEVPK- 168
Query: 184 NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVM 243
++V+G IG+E ++ + +V ++ EV ++F+ +G+
Sbjct: 169 RLIVVGGGVIGLELGVVW-HRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRT 227
Query: 244 KANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVELNGQKAVV 301
V++ K L+ G + AD V+V +G T L+ G+ + + +
Sbjct: 228 GVRVTAVVPEAKG--ARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIP 285
Query: 302 VNEYLETNVPGVYAGGDIAYAPLHSFYNKNASI----------GH--YQ----LAQYHGR 345
V+E+L T VP +YA GD+ P+ + I GH YQ + H
Sbjct: 286 VDEHLRTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVRGFGHVDYQAIPSVVYTHPE 345
Query: 346 IAALNMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEALKFTAYYSNADK 405
IAA+ E++ IP + VG +F A+G + +G+ E ++ D+
Sbjct: 346 IAAVGYTEEELKAQGIP------YKVG-KFPYSASGRARA--MGETEGFIKVLAHAKTDR 396
Query: 406 VLAILTVGM---DPLAAQFAEQVLEFPYSS-----LPHSHRCLGVVL 444
+L + +G D LA A L F S+ PH+H L +L
Sbjct: 397 ILGVHGIGARVGDVLAE--AALALFFKASAEDLGRAPHAHPSLSEIL 441
Score = 60.1 bits (144), Expect = 9e-09, Method: Composition-based stats.
Identities = 71/308 (23%), Positives = 133/308 (43%), Gaps = 36/308 (11%)
Query: 677 LNEKKIKLQD-GTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPES 735
L+E+K+ +++ G ++ I +ATGS+P A +V Y R V ++ P+
Sbjct: 114 LSERKVLVEETGEELEARYILIATGSAPLIPPWA----QVDYERVVTSTEALSFPEVPK- 168
Query: 736 NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVM 795
++V+G IG+E ++ + +V ++ EV ++F+ +G+
Sbjct: 169 RLIVVGGGVIGLELGVVW-HRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRT 227
Query: 796 KANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVELNGQKAVV 853
V++ K L+ G + AD V+V +G T L+ G+ + + +
Sbjct: 228 GVRVTAVVPEAKG--ARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIP 285
Query: 854 VNEYLETNVPGVYAGGDIAYAPLHSFYNKNASI----------GH--YQ----LAQYHGR 897
V+E+L T VP +YA GD+ P+ + I GH YQ + H
Sbjct: 286 VDEHLRTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVRGFGHVDYQAIPSVVYTHPE 345
Query: 898 IAALNMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEALKFTAYYSNADK 957
IAA+ E++ IP + VG +F A+G + +G+ E ++ D+
Sbjct: 346 IAAVGYTEEELKAQGIP------YKVG-KFPYSASGRARA--MGETEGFIKVLAHAKTDR 396
Query: 958 VLAILTVG 965
+L + +G
Sbjct: 397 ILGVHGIG 404
Score = 60.1 bits (144), Expect = 9e-09, Method: Composition-based stats.
Identities = 71/308 (23%), Positives = 133/308 (43%), Gaps = 36/308 (11%)
Query: 1148 LNEKKIKLQD-GTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPES 1206
L+E+K+ +++ G ++ I +ATGS+P A +V Y R V ++ P+
Sbjct: 114 LSERKVLVEETGEELEARYILIATGSAPLIPPWA----QVDYERVVTSTEALSFPEVPK- 168
Query: 1207 NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVM 1266
++V+G IG+E ++ + +V ++ EV ++F+ +G+
Sbjct: 169 RLIVVGGGVIGLELGVVW-HRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRT 227
Query: 1267 KANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVELNGQKAVV 1324
V++ K L+ G + AD V+V +G T L+ G+ + + +
Sbjct: 228 GVRVTAVVPEAKG--ARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIP 285
Query: 1325 VNEYLETNVPGVYAGGDIAYAPLHSFYNKNASI----------GH--YQ----LAQYHGR 1368
V+E+L T VP +YA GD+ P+ + I GH YQ + H
Sbjct: 286 VDEHLRTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVRGFGHVDYQAIPSVVYTHPE 345
Query: 1369 IAALNMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEALKFTAYYSNADK 1428
IAA+ E++ IP + VG +F A+G + +G+ E ++ D+
Sbjct: 346 IAAVGYTEEELKAQGIP------YKVG-KFPYSASGRARA--MGETEGFIKVLAHAKTDR 396
Query: 1429 VLAILTVG 1436
+L + +G
Sbjct: 397 ILGVHGIG 404
>pdb|1MO9|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MO9|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MOK|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|C Chain C, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|D Chain D, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|2C3D|A Chain A, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3D|B Chain B, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3C|A Chain A, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|2C3C|B Chain B, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|3Q6J|A Chain A, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
pdb|3Q6J|B Chain B, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
Length = 523
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 113/257 (43%), Gaps = 29/257 (11%)
Query: 143 IYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHI--TPESNVVVIGSSFIGMEAAAF 200
+ LA G+ P T+ GVN + V D + + P S VVV+G S +E F
Sbjct: 178 LILAVGAGPGTLD-VPGVNA----KGVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCF 232
Query: 201 CASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTA 260
+ + ++ R P + E + + +G++ + +NV+ E++ V A
Sbjct: 233 FNATGRRTVMLVR-TEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQA 291
Query: 261 --ANLDNGTT-IPADLVIVGIGTVLNTNYLDG-KGVELNGQKAVVVNEYLETNVPGVYAG 316
A NG I D V +G+G + L G++L + V+VNEYL+T+VP VYA
Sbjct: 292 VVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYLQTSVPNVYAV 351
Query: 317 GDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTSLS--TIPFFWTMLFGVGFR 374
GD+ P+ F A+ G AA N++ +K S + P F + V F
Sbjct: 352 GDLIGGPMEMFK-----------ARKSGCYAARNVMGEKISYTPKNYPDFLHTHYEVSFL 400
Query: 375 FAG----YAAGHTQVDI 387
G AAGH V I
Sbjct: 401 GMGEEEARAAGHEIVTI 417
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 113/257 (43%), Gaps = 29/257 (11%)
Query: 695 IYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHI--TPESNVVVIGSSFIGMEAAAF 752
+ LA G+ P T+ GVN + V D + + P S VVV+G S +E F
Sbjct: 178 LILAVGAGPGTLD-VPGVNA----KGVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCF 232
Query: 753 CASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTA 812
+ + ++ R P + E + + +G++ + +NV+ E++ V A
Sbjct: 233 FNATGRRTVMLVR-TEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQA 291
Query: 813 --ANLDNGTT-IPADLVIVGIGTVLNTNYLDG-KGVELNGQKAVVVNEYLETNVPGVYAG 868
A NG I D V +G+G + L G++L + V+VNEYL+T+VP VYA
Sbjct: 292 VVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYLQTSVPNVYAV 351
Query: 869 GDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTSLS--TIPFFWTMLFGVGFR 926
GD+ P+ F A+ G AA N++ +K S + P F + V F
Sbjct: 352 GDLIGGPMEMFK-----------ARKSGCYAARNVMGEKISYTPKNYPDFLHTHYEVSFL 400
Query: 927 FAG----YAAGHTQVDI 939
G AAGH V I
Sbjct: 401 GMGEEEARAAGHEIVTI 417
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 113/257 (43%), Gaps = 29/257 (11%)
Query: 1166 IYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHI--TPESNVVVIGSSFIGMEAAAF 1223
+ LA G+ P T+ GVN + V D + + P S VVV+G S +E F
Sbjct: 178 LILAVGAGPGTLD-VPGVNA----KGVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCF 232
Query: 1224 CASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTA 1283
+ + ++ R P + E + + +G++ + +NV+ E++ V A
Sbjct: 233 FNATGRRTVMLVR-TEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQA 291
Query: 1284 --ANLDNGTT-IPADLVIVGIGTVLNTNYLDG-KGVELNGQKAVVVNEYLETNVPGVYAG 1339
A NG I D V +G+G + L G++L + V+VNEYL+T+VP VYA
Sbjct: 292 VVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYLQTSVPNVYAV 351
Query: 1340 GDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTSLS--TIPFFWTMLFGVGFR 1397
GD+ P+ F A+ G AA N++ +K S + P F + V F
Sbjct: 352 GDLIGGPMEMFK-----------ARKSGCYAARNVMGEKISYTPKNYPDFLHTHYEVSFL 400
Query: 1398 FAG----YAAGHTQVDI 1410
G AAGH V I
Sbjct: 401 GMGEEEARAAGHEIVTI 417
>pdb|1YQZ|A Chain A, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom
Resolution
pdb|1YQZ|B Chain B, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom
Resolution
Length = 438
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 103 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 158
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 65 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 124
Query: 159 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 216
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 125 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 181
Query: 217 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 276
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 182 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 235
Query: 277 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 320
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 236 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 279
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 655 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 710
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 65 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 124
Query: 711 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 768
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 125 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 181
Query: 769 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 828
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 182 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 235
Query: 829 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 872
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 236 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 279
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 1126 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 1181
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 65 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 124
Query: 1182 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 1239
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 125 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 181
Query: 1240 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 1299
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 182 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 235
Query: 1300 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 1343
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 236 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 279
>pdb|4EQW|A Chain A, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
pdb|4EQW|B Chain B, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
Length = 437
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 103 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 158
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 64 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 123
Query: 159 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 216
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 124 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 180
Query: 217 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 276
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 181 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 234
Query: 277 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 320
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 235 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 278
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 655 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 710
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 64 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 123
Query: 711 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 768
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 124 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 180
Query: 769 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 828
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 181 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 234
Query: 829 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 872
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 235 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 278
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 1126 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 1181
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 64 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 123
Query: 1182 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 1239
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 124 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 180
Query: 1240 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 1299
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 181 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 234
Query: 1300 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 1343
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 235 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 278
>pdb|4EM3|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM3|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM4|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
pdb|4EM4|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
Length = 437
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 103 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 158
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 64 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 123
Query: 159 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 216
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 124 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 180
Query: 217 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 276
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 181 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 234
Query: 277 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 320
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 235 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 278
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 655 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 710
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 64 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 123
Query: 711 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 768
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 124 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 180
Query: 769 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 828
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 181 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 234
Query: 829 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 872
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 235 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 278
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 1126 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 1181
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 64 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 123
Query: 1182 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 1239
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 124 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 180
Query: 1240 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 1299
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 181 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 234
Query: 1300 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 1343
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 235 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 278
>pdb|4EQS|A Chain A, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQS|B Chain B, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 103 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 158
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 64 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 123
Query: 159 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 216
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 124 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 180
Query: 217 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 276
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 181 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 234
Query: 277 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 320
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 235 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 278
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 655 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 710
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 64 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 123
Query: 711 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 768
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 124 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 180
Query: 769 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 828
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 181 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 234
Query: 829 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 872
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 235 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 278
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 1126 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 1181
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 64 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 123
Query: 1182 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 1239
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 124 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 180
Query: 1240 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 1299
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 181 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 234
Query: 1300 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 1343
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 235 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 278
>pdb|4EQR|A Chain A, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQR|B Chain B, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 103 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 158
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 64 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 123
Query: 159 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 216
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 124 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 180
Query: 217 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 276
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 181 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 234
Query: 277 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 320
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 235 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 278
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 655 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 710
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 64 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 123
Query: 711 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 768
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 124 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 180
Query: 769 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 828
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 181 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 234
Query: 829 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 872
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 235 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 278
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 1126 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 1181
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 64 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 123
Query: 1182 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 1239
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 124 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 180
Query: 1240 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 1299
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 181 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 234
Query: 1300 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 1343
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 235 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 278
>pdb|4EMW|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
pdb|4EMW|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
Length = 436
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 103 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 158
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 64 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 123
Query: 159 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 216
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 124 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 180
Query: 217 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 276
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 181 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 234
Query: 277 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 320
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 235 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 278
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 655 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 710
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 64 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 123
Query: 711 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 768
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 124 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 180
Query: 769 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 828
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 181 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 234
Query: 829 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 872
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 235 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 278
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 1126 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 1181
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 64 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 123
Query: 1182 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 1239
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 124 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 180
Query: 1240 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 1299
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 181 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 234
Query: 1300 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 1343
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 235 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 278
>pdb|4EQX|A Chain A, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQX|B Chain B, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 103 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 158
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 64 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 123
Query: 159 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 216
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 124 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 180
Query: 217 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 276
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 181 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 234
Query: 277 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 320
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 235 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 278
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 655 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 710
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 64 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 123
Query: 711 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 768
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 124 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 180
Query: 769 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 828
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 181 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 234
Query: 829 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 872
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 235 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 278
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 1126 EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY----LATGSSPRTISQAD 1181
E+FY I V ++I+ ++ + L T+ F + Y L+ G+S ++
Sbjct: 64 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFES 123
Query: 1182 GVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAV 1239
+ F LR +ED + I I V+V+G+ ++ +E + T++ R
Sbjct: 124 DI--TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD- 180
Query: 1240 PFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 1299
+ + ++ + I + + + + + +++ NE +G D++I
Sbjct: 181 KINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIE 234
Query: 1300 GIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 1343
G+GT N+ +++ ++L+ + + VN+ ETNVP +YA GDIA
Sbjct: 235 GVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA 278
>pdb|2WOI|A Chain A, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|B Chain B, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|C Chain C, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|D Chain D, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOV|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOW|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WP5|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP6|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WPC|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPE|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPF|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
Length = 495
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 26/216 (12%)
Query: 114 IKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT-----ISQADGVNKVFYLRT 168
++ K ++ E + K +++ D I LATGS P+ I N+ FYL
Sbjct: 132 LESKNVVVVRETADPKSAVKERLQAD--HILLATGSWPQMPAIPGIEHCISSNEAFYLPE 189
Query: 169 VEDANNIAPHITPESNVVVIGSSFIGME-AAAFCASKVKS--VTVVGRGAVPFQESLGKE 225
P V+ +G FI +E A F A K VT+ R + + +
Sbjct: 190 ------------PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR-GFDET 236
Query: 226 VGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN 285
+ E +TK + G++ + N + N ++G T+ D+V++ IG + TN
Sbjct: 237 IREEVTKQLTANGIEIMTNENPAKVSLNTDGS-KHVTFESGKTLDVDVVMMAIGRIPRTN 295
Query: 286 --YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 319
L GV+L + V V+E+ TNVP +YA GDI
Sbjct: 296 DLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDI 331
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 26/216 (12%)
Query: 666 IKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT-----ISQADGVNKVFYLRT 720
++ K ++ E + K +++ D I LATGS P+ I N+ FYL
Sbjct: 132 LESKNVVVVRETADPKSAVKERLQAD--HILLATGSWPQMPAIPGIEHCISSNEAFYLPE 189
Query: 721 VEDANNIAPHITPESNVVVIGSSFIGME-AAAFCASKVKS--VTVVGRGAVPFQESLGKE 777
P V+ +G FI +E A F A K VT+ R + + +
Sbjct: 190 ------------PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR-GFDET 236
Query: 778 VGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN 837
+ E +TK + G++ + N + N ++G T+ D+V++ IG + TN
Sbjct: 237 IREEVTKQLTANGIEIMTNENPAKVSLNTDGS-KHVTFESGKTLDVDVVMMAIGRIPRTN 295
Query: 838 --YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 871
L GV+L + V V+E+ TNVP +YA GDI
Sbjct: 296 DLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDI 331
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 26/216 (12%)
Query: 1137 IKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT-----ISQADGVNKVFYLRT 1191
++ K ++ E + K +++ D I LATGS P+ I N+ FYL
Sbjct: 132 LESKNVVVVRETADPKSAVKERLQAD--HILLATGSWPQMPAIPGIEHCISSNEAFYLPE 189
Query: 1192 VEDANNIAPHITPESNVVVIGSSFIGME-AAAFCASKVKS--VTVVGRGAVPFQESLGKE 1248
P V+ +G FI +E A F A K VT+ R + + +
Sbjct: 190 ------------PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR-GFDET 236
Query: 1249 VGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN 1308
+ E +TK + G++ + N + N ++G T+ D+V++ IG + TN
Sbjct: 237 IREEVTKQLTANGIEIMTNENPAKVSLNTDGS-KHVTFESGKTLDVDVVMMAIGRIPRTN 295
Query: 1309 --YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 1342
L GV+L + V V+E+ TNVP +YA GDI
Sbjct: 296 DLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDI 331
>pdb|2WBA|A Chain A, Properties Of Trypanothione Reductase From T. Brucei
pdb|2WBA|B Chain B, Properties Of Trypanothione Reductase From T. Brucei
Length = 492
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 26/216 (12%)
Query: 114 IKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT-----ISQADGVNKVFYLRT 168
++ K ++ E + K +++ D I LATGS P+ I N+ FYL
Sbjct: 129 LESKNVVVVRETADPKSAVKERLQAD--HILLATGSWPQMPAIPGIEHCISSNEAFYLPE 186
Query: 169 VEDANNIAPHITPESNVVVIGSSFIGME-AAAFCASKVKS--VTVVGRGAVPFQESLGKE 225
P V+ +G FI +E A F A K VT+ R + + +
Sbjct: 187 ------------PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR-GFDET 233
Query: 226 VGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN 285
+ E +TK + G++ + N + N ++G T+ D+V++ IG + TN
Sbjct: 234 IREEVTKQLTANGIEIMTNENPAKVSLNTDGS-KHVTFESGKTLDVDVVMMAIGRIPRTN 292
Query: 286 --YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 319
L GV+L + V V+E+ TNVP +YA GDI
Sbjct: 293 DLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDI 328
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 26/216 (12%)
Query: 666 IKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT-----ISQADGVNKVFYLRT 720
++ K ++ E + K +++ D I LATGS P+ I N+ FYL
Sbjct: 129 LESKNVVVVRETADPKSAVKERLQAD--HILLATGSWPQMPAIPGIEHCISSNEAFYLPE 186
Query: 721 VEDANNIAPHITPESNVVVIGSSFIGME-AAAFCASKVKS--VTVVGRGAVPFQESLGKE 777
P V+ +G FI +E A F A K VT+ R + + +
Sbjct: 187 ------------PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR-GFDET 233
Query: 778 VGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN 837
+ E +TK + G++ + N + N ++G T+ D+V++ IG + TN
Sbjct: 234 IREEVTKQLTANGIEIMTNENPAKVSLNTDGS-KHVTFESGKTLDVDVVMMAIGRIPRTN 292
Query: 838 --YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 871
L GV+L + V V+E+ TNVP +YA GDI
Sbjct: 293 DLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDI 328
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 26/216 (12%)
Query: 1137 IKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT-----ISQADGVNKVFYLRT 1191
++ K ++ E + K +++ D I LATGS P+ I N+ FYL
Sbjct: 129 LESKNVVVVRETADPKSAVKERLQAD--HILLATGSWPQMPAIPGIEHCISSNEAFYLPE 186
Query: 1192 VEDANNIAPHITPESNVVVIGSSFIGME-AAAFCASKVKS--VTVVGRGAVPFQESLGKE 1248
P V+ +G FI +E A F A K VT+ R + + +
Sbjct: 187 ------------PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR-GFDET 233
Query: 1249 VGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN 1308
+ E +TK + G++ + N + N ++G T+ D+V++ IG + TN
Sbjct: 234 IREEVTKQLTANGIEIMTNENPAKVSLNTDGS-KHVTFESGKTLDVDVVMMAIGRIPRTN 292
Query: 1309 --YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 1342
L GV+L + V V+E+ TNVP +YA GDI
Sbjct: 293 DLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDI 328
>pdb|1XHC|A Chain A, Nadh Oxidase /nitrite Reductase From Pyrococcus Furiosus
Pfu-1140779- 001
Length = 367
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 148/350 (42%), Gaps = 45/350 (12%)
Query: 47 IVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD--IKADSILLRTEE 104
++VG GP G + L Q T ++ I E Y + LS + I + + + +
Sbjct: 12 VIVGNGPGGFELAKQLSQ---TYEVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLD 68
Query: 105 FYKDNDIHVIKGKKIISDSELNE--KKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNK 162
+Y+ I + ++ +++L + +K+ + + + + + LATG+ R Q G
Sbjct: 69 WYRKRGIEI----RLAEEAKLIDRGRKVVITEKGEVPYDTLVLATGARARE-PQIKGKEY 123
Query: 163 VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESL 222
+ LRT+ DA+ I I ++IG FIG+E A A V ++ RGA+ L
Sbjct: 124 LLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL--GL 181
Query: 223 GKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVL 282
+E+ I + E GVKF + N E NE+ +T N I + I IG V
Sbjct: 182 DEELSNMIKDMLEETGVKFFL--NSELLEANEEGVLT-----NSGFIEGKVKICAIGIVP 234
Query: 283 NTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQY 342
N + G+ + +++++ T+ VYA GD A+Y
Sbjct: 235 NVDLARRSGIHTG--RGILIDDNFRTSAKDVYAIGD--------------------CAEY 272
Query: 343 HGRIA--ALNMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGD 390
G IA A +E+ L+ I + FR + G Q+ I+G+
Sbjct: 273 SGIIAGTAKAAMEQARVLADILKGEPRRYNFKFRSTVFKFGKLQIAIIGN 322
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 148/350 (42%), Gaps = 45/350 (12%)
Query: 599 IVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD--IKADSILLRTEE 656
++VG GP G + L Q T ++ I E Y + LS + I + + + +
Sbjct: 12 VIVGNGPGGFELAKQLSQ---TYEVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLD 68
Query: 657 FYKDNDIHVIKGKKIISDSELNE--KKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNK 714
+Y+ I + ++ +++L + +K+ + + + + + LATG+ R Q G
Sbjct: 69 WYRKRGIEI----RLAEEAKLIDRGRKVVITEKGEVPYDTLVLATGARARE-PQIKGKEY 123
Query: 715 VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESL 774
+ LRT+ DA+ I I ++IG FIG+E A A V ++ RGA+ L
Sbjct: 124 LLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL--GL 181
Query: 775 GKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVL 834
+E+ I + E GVKF + N E NE+ +T N I + I IG V
Sbjct: 182 DEELSNMIKDMLEETGVKFFL--NSELLEANEEGVLT-----NSGFIEGKVKICAIGIVP 234
Query: 835 NTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQY 894
N + G+ + +++++ T+ VYA GD A+Y
Sbjct: 235 NVDLARRSGIHTG--RGILIDDNFRTSAKDVYAIGD--------------------CAEY 272
Query: 895 HGRIA--ALNMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGD 942
G IA A +E+ L+ I + FR + G Q+ I+G+
Sbjct: 273 SGIIAGTAKAAMEQARVLADILKGEPRRYNFKFRSTVFKFGKLQIAIIGN 322
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 148/350 (42%), Gaps = 45/350 (12%)
Query: 1070 IVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD--IKADSILLRTEE 1127
++VG GP G + L Q T ++ I E Y + LS + I + + + +
Sbjct: 12 VIVGNGPGGFELAKQLSQ---TYEVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLD 68
Query: 1128 FYKDNDIHVIKGKKIISDSELNE--KKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNK 1185
+Y+ I + ++ +++L + +K+ + + + + + LATG+ R Q G
Sbjct: 69 WYRKRGIEI----RLAEEAKLIDRGRKVVITEKGEVPYDTLVLATGARARE-PQIKGKEY 123
Query: 1186 VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESL 1245
+ LRT+ DA+ I I ++IG FIG+E A A V ++ RGA+ L
Sbjct: 124 LLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL--GL 181
Query: 1246 GKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVL 1305
+E+ I + E GVKF + N E NE+ +T N I + I IG V
Sbjct: 182 DEELSNMIKDMLEETGVKFFL--NSELLEANEEGVLT-----NSGFIEGKVKICAIGIVP 234
Query: 1306 NTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQY 1365
N + G+ + +++++ T+ VYA GD A+Y
Sbjct: 235 NVDLARRSGIHTG--RGILIDDNFRTSAKDVYAIGD--------------------CAEY 272
Query: 1366 HGRIA--ALNMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGD 1413
G IA A +E+ L+ I + FR + G Q+ I+G+
Sbjct: 273 SGIIAGTAKAAMEQARVLADILKGEPRRYNFKFRSTVFKFGKLQIAIIGN 322
>pdb|1NDA|A Chain A, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|B Chain B, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|C Chain C, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|D Chain D, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
Length = 491
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 124/287 (43%), Gaps = 45/287 (15%)
Query: 54 SGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSIL---LRTEEFYKDND 110
+GA +E LR++ G + D L R + K + +K +++L EE ++D +
Sbjct: 65 TGAQYMEHLRESAGFGWEF---DRTTL---RAEWKKLIAVKDEAVLNINKSYEEMFRDTE 118
Query: 111 -------IHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT-----ISQAD 158
++ K +++ E + +++ ++ I LA+GS P I
Sbjct: 119 GLEFFLGWGSLESKNVVNVRESADPASAVKE--RLETENILLASGSWPHMPNIPGIEHCI 176
Query: 159 GVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGME-AAAFCASKVK--SVTVVGRGA 215
N+ FYL P V+ +G FI +E A F A K K VT+ RG
Sbjct: 177 SSNEAFYLPE------------PPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGE 224
Query: 216 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 275
+ + + E +TK + G++ + K N + E N + ++G + DLV+
Sbjct: 225 MILR-GFDHTLREELTKQLTANGIQILTKENPAKVELNADGS-KSVTFESGKKMDFDLVM 282
Query: 276 VGIGTVLNTN--YLDGKGVEL-NGQKAVVVNEYLETNVPGVYAGGDI 319
+ IG T L GV + NG V V+EY TNV +YA GD+
Sbjct: 283 MAIGRSPRTKDLQLQNAGVMIKNG--GVQVDEYSRTNVSNIYAIGDV 327
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 124/287 (43%), Gaps = 45/287 (15%)
Query: 606 SGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSIL---LRTEEFYKDND 662
+GA +E LR++ G + D L R + K + +K +++L EE ++D +
Sbjct: 65 TGAQYMEHLRESAGFGWEF---DRTTL---RAEWKKLIAVKDEAVLNINKSYEEMFRDTE 118
Query: 663 -------IHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT-----ISQAD 710
++ K +++ E + +++ ++ I LA+GS P I
Sbjct: 119 GLEFFLGWGSLESKNVVNVRESADPASAVKE--RLETENILLASGSWPHMPNIPGIEHCI 176
Query: 711 GVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGME-AAAFCASKVK--SVTVVGRGA 767
N+ FYL P V+ +G FI +E A F A K K VT+ RG
Sbjct: 177 SSNEAFYLPE------------PPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGE 224
Query: 768 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 827
+ + + E +TK + G++ + K N + E N + ++G + DLV+
Sbjct: 225 MILR-GFDHTLREELTKQLTANGIQILTKENPAKVELNADGS-KSVTFESGKKMDFDLVM 282
Query: 828 VGIGTVLNTN--YLDGKGVEL-NGQKAVVVNEYLETNVPGVYAGGDI 871
+ IG T L GV + NG V V+EY TNV +YA GD+
Sbjct: 283 MAIGRSPRTKDLQLQNAGVMIKNG--GVQVDEYSRTNVSNIYAIGDV 327
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 124/287 (43%), Gaps = 45/287 (15%)
Query: 1077 SGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSIL---LRTEEFYKDND 1133
+GA +E LR++ G + D L R + K + +K +++L EE ++D +
Sbjct: 65 TGAQYMEHLRESAGFGWEF---DRTTL---RAEWKKLIAVKDEAVLNINKSYEEMFRDTE 118
Query: 1134 -------IHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT-----ISQAD 1181
++ K +++ E + +++ ++ I LA+GS P I
Sbjct: 119 GLEFFLGWGSLESKNVVNVRESADPASAVKE--RLETENILLASGSWPHMPNIPGIEHCI 176
Query: 1182 GVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGME-AAAFCASKVK--SVTVVGRGA 1238
N+ FYL P V+ +G FI +E A F A K K VT+ RG
Sbjct: 177 SSNEAFYLPE------------PPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGE 224
Query: 1239 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 1298
+ + + E +TK + G++ + K N + E N + ++G + DLV+
Sbjct: 225 MILR-GFDHTLREELTKQLTANGIQILTKENPAKVELNADGS-KSVTFESGKKMDFDLVM 282
Query: 1299 VGIGTVLNTN--YLDGKGVEL-NGQKAVVVNEYLETNVPGVYAGGDI 1342
+ IG T L GV + NG V V+EY TNV +YA GD+
Sbjct: 283 MAIGRSPRTKDLQLQNAGVMIKNG--GVQVDEYSRTNVSNIYAIGDV 327
>pdb|3IWA|A Chain A, Crystal Structure Of A Fad-Dependent Pyridine
Nucleotide-Disulphide Oxidoreductase From Desulfovibrio
Vulgaris
Length = 472
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 134/332 (40%), Gaps = 50/332 (15%)
Query: 68 TGKLYFITDENFLPYDRVKLSKQLDIKAD-SILLRTEEFYKDNDIHVIKGKKIISDSELN 126
+G++ I PY+ V+ + I D L+ T D H ++ I +
Sbjct: 52 SGEVSNIESLQATPYNVVRDPEFFRINKDVEALVETRAHAIDRAAHTVE----IENLRTG 107
Query: 127 EKKIKLQDGTSIDFTKIYLATGS-SPRTISQADGVNKVFYLRTVEDANNIAPHITPE--S 183
E++ ++ + K+ LA GS + R + + V + +++A + I+ S
Sbjct: 108 ERR-------TLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVS 160
Query: 184 NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVM 243
V++G FIG+E A A T V E+ ++I F SK + ++
Sbjct: 161 KAVIVGGGFIGLEMAVSLADMWGIDTTV------------VELADQIMPGFTSKSLSQML 208
Query: 244 KANVSSFEKNE--------------KNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDG 289
+ + EKN+ +N A + + T+ ADLVI+ G NT
Sbjct: 209 RHD---LEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQLARD 265
Query: 290 KGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAAL 349
G+EL+ + A++V+ + T+ P ++AGGD P + K +A GR+
Sbjct: 266 AGLELDPRGAIIVDTRMRTSDPDIFAGGDCVTIP-NLVTGKPGFFPLGSMANRQGRVIGT 324
Query: 350 NMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAG 381
N+ + + W + F G A+G
Sbjct: 325 NLADGDATFPGAVGSWAVKL-----FEGSASG 351
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 134/332 (40%), Gaps = 50/332 (15%)
Query: 620 TGKLYFITDENFLPYDRVKLSKQLDIKAD-SILLRTEEFYKDNDIHVIKGKKIISDSELN 678
+G++ I PY+ V+ + I D L+ T D H ++ I +
Sbjct: 52 SGEVSNIESLQATPYNVVRDPEFFRINKDVEALVETRAHAIDRAAHTVE----IENLRTG 107
Query: 679 EKKIKLQDGTSIDFTKIYLATGS-SPRTISQADGVNKVFYLRTVEDANNIAPHITPE--S 735
E++ ++ + K+ LA GS + R + + V + +++A + I+ S
Sbjct: 108 ERR-------TLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVS 160
Query: 736 NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVM 795
V++G FIG+E A A T V E+ ++I F SK + ++
Sbjct: 161 KAVIVGGGFIGLEMAVSLADMWGIDTTV------------VELADQIMPGFTSKSLSQML 208
Query: 796 KANVSSFEKNE--------------KNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDG 841
+ + EKN+ +N A + + T+ ADLVI+ G NT
Sbjct: 209 RHD---LEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQLARD 265
Query: 842 KGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAAL 901
G+EL+ + A++V+ + T+ P ++AGGD P + K +A GR+
Sbjct: 266 AGLELDPRGAIIVDTRMRTSDPDIFAGGDCVTIP-NLVTGKPGFFPLGSMANRQGRVIGT 324
Query: 902 NMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAG 933
N+ + + W + F G A+G
Sbjct: 325 NLADGDATFPGAVGSWAVKL-----FEGSASG 351
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 134/332 (40%), Gaps = 50/332 (15%)
Query: 1091 TGKLYFITDENFLPYDRVKLSKQLDIKAD-SILLRTEEFYKDNDIHVIKGKKIISDSELN 1149
+G++ I PY+ V+ + I D L+ T D H ++ I +
Sbjct: 52 SGEVSNIESLQATPYNVVRDPEFFRINKDVEALVETRAHAIDRAAHTVE----IENLRTG 107
Query: 1150 EKKIKLQDGTSIDFTKIYLATGS-SPRTISQADGVNKVFYLRTVEDANNIAPHITPE--S 1206
E++ ++ + K+ LA GS + R + + V + +++A + I+ S
Sbjct: 108 ERR-------TLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVS 160
Query: 1207 NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVM 1266
V++G FIG+E A A T V E+ ++I F SK + ++
Sbjct: 161 KAVIVGGGFIGLEMAVSLADMWGIDTTV------------VELADQIMPGFTSKSLSQML 208
Query: 1267 KANVSSFEKNE--------------KNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDG 1312
+ + EKN+ +N A + + T+ ADLVI+ G NT
Sbjct: 209 RHD---LEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQLARD 265
Query: 1313 KGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAAL 1372
G+EL+ + A++V+ + T+ P ++AGGD P + K +A GR+
Sbjct: 266 AGLELDPRGAIIVDTRMRTSDPDIFAGGDCVTIP-NLVTGKPGFFPLGSMANRQGRVIGT 324
Query: 1373 NMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAG 1404
N+ + + W + F G A+G
Sbjct: 325 NLADGDATFPGAVGSWAVKL-----FEGSASG 351
>pdb|3LAD|A Chain A, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
pdb|3LAD|B Chain B, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
Length = 476
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 142/337 (42%), Gaps = 49/337 (14%)
Query: 125 LNEKKIKL--QDGTS--IDFTKIYLATGSSPRTISQADGVNKVFYLRT-VEDANNIAPHI 179
L KK+++ DG+S +D + LA+GS P I A V T D N+
Sbjct: 124 LAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAPVDQDVIVDSTGALDFQNV---- 179
Query: 180 TPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGV 239
+ VIG+ IG+E + A VTV+ F ++ ++V + K+ +G+
Sbjct: 180 --PGKLGVIGAGVIGLELGSVWARLGAEVTVL-EAMDKFLPAVDEQVAKEAQKILTKQGL 236
Query: 240 KFVMKANVSSFE-KNEKNDVTAANLDNGTTIPADLVIVGIGTV-LNTNYLDG-KGVELNG 296
K ++ A V+ E KN++ V + + + D +IV +G + T+ L GV L+
Sbjct: 237 KILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDE 296
Query: 297 QKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASI-------GHYQLAQY------- 342
+ + V++Y T+VPGVYA GD+ + + + GH Y
Sbjct: 297 RGFIYVDDYCATSVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAGHKAQMNYDLIPAVI 356
Query: 343 --HGRIAALNMVEKKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEALKFTAYY 400
H IA + E+ + + GV F FA D G F
Sbjct: 357 YTHPEIAGVGKTEQALKAEGV----AINVGV-FPFAASGRAMAANDTAG------FVKVI 405
Query: 401 SNA--DKVLAILTVGMDPLAAQFAEQ---VLEFPYSS 432
++A D+VL + +G P AA+ +Q +EF S+
Sbjct: 406 ADAKTDRVLGVHVIG--PSAAELVQQGAIAMEFGTSA 440
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 677 LNEKKIKL--QDGTS--IDFTKIYLATGSSPRTISQADGVNKVFYLRT-VEDANNIAPHI 731
L KK+++ DG+S +D + LA+GS P I A V T D N+
Sbjct: 124 LAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAPVDQDVIVDSTGALDFQNV---- 179
Query: 732 TPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGV 791
+ VIG+ IG+E + A VTV+ F ++ ++V + K+ +G+
Sbjct: 180 --PGKLGVIGAGVIGLELGSVWARLGAEVTVL-EAMDKFLPAVDEQVAKEAQKILTKQGL 236
Query: 792 KFVMKANVSSFE-KNEKNDVTAANLDNGTTIPADLVIVGIGTV-LNTNYLDG-KGVELNG 848
K ++ A V+ E KN++ V + + + D +IV +G + T+ L GV L+
Sbjct: 237 KILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDE 296
Query: 849 QKAVVVNEYLETNVPGVYAGGDI 871
+ + V++Y T+VPGVYA GD+
Sbjct: 297 RGFIYVDDYCATSVPGVYAIGDV 319
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 1148 LNEKKIKL--QDGTS--IDFTKIYLATGSSPRTISQADGVNKVFYLRT-VEDANNIAPHI 1202
L KK+++ DG+S +D + LA+GS P I A V T D N+
Sbjct: 124 LAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAPVDQDVIVDSTGALDFQNV---- 179
Query: 1203 TPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGV 1262
+ VIG+ IG+E + A VTV+ F ++ ++V + K+ +G+
Sbjct: 180 --PGKLGVIGAGVIGLELGSVWARLGAEVTVL-EAMDKFLPAVDEQVAKEAQKILTKQGL 236
Query: 1263 KFVMKANVSSFE-KNEKNDVTAANLDNGTTIPADLVIVGIGTV-LNTNYLDG-KGVELNG 1319
K ++ A V+ E KN++ V + + + D +IV +G + T+ L GV L+
Sbjct: 237 KILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDE 296
Query: 1320 QKAVVVNEYLETNVPGVYAGGDI 1342
+ + V++Y T+VPGVYA GD+
Sbjct: 297 RGFIYVDDYCATSVPGVYAIGDV 319
>pdb|3ICR|A Chain A, Crystal Structure Of Oxidized Bacillus Anthracis Coadr-Rhd
pdb|3ICR|B Chain B, Crystal Structure Of Oxidized Bacillus Anthracis Coadr-Rhd
pdb|3ICS|A Chain A, Crystal Structure Of Partially Reduced Bacillus Anthracis
Coadr-Rhd
pdb|3ICS|B Chain B, Crystal Structure Of Partially Reduced Bacillus Anthracis
Coadr-Rhd
pdb|3ICT|A Chain A, Crystal Structure Of Reduced Bacillus Anthracis Coadr-Rhd
pdb|3ICT|B Chain B, Crystal Structure Of Reduced Bacillus Anthracis Coadr-Rhd
Length = 588
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 9/183 (4%)
Query: 140 FTKIYLATGSSP--RTISQADGVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGM 195
+ + L+ G+ P +I + +F LR V D + I +I + + VIG FIG+
Sbjct: 141 YDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGV 200
Query: 196 EAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEK 255
E + VT+V A + E + + ++ V+ V + V + E+N
Sbjct: 201 EXVENLRERGIEVTLV-EXANQVXPPIDYEXAAYVHEHXKNHDVELVFEDGVDALEENG- 258
Query: 256 NDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYA 315
L +G+ I D +I+ IG ++ G G+ L + + VNE +T+ P +YA
Sbjct: 259 ---AVVRLKSGSVIQTDXLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQTSDPHIYA 315
Query: 316 GGD 318
GD
Sbjct: 316 IGD 318
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 9/183 (4%)
Query: 692 FTKIYLATGSSP--RTISQADGVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGM 747
+ + L+ G+ P +I + +F LR V D + I +I + + VIG FIG+
Sbjct: 141 YDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGV 200
Query: 748 EAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEK 807
E + VT+V A + E + + ++ V+ V + V + E+N
Sbjct: 201 EXVENLRERGIEVTLV-EXANQVXPPIDYEXAAYVHEHXKNHDVELVFEDGVDALEENG- 258
Query: 808 NDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYA 867
L +G+ I D +I+ IG ++ G G+ L + + VNE +T+ P +YA
Sbjct: 259 ---AVVRLKSGSVIQTDXLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQTSDPHIYA 315
Query: 868 GGD 870
GD
Sbjct: 316 IGD 318
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 9/183 (4%)
Query: 1163 FTKIYLATGSSP--RTISQADGVNKVFYLRTVEDANNIAPHITPES--NVVVIGSSFIGM 1218
+ + L+ G+ P +I + +F LR V D + I +I + + VIG FIG+
Sbjct: 141 YDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGV 200
Query: 1219 EAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEK 1278
E + VT+V A + E + + ++ V+ V + V + E+N
Sbjct: 201 EXVENLRERGIEVTLV-EXANQVXPPIDYEXAAYVHEHXKNHDVELVFEDGVDALEENG- 258
Query: 1279 NDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYA 1338
L +G+ I D +I+ IG ++ G G+ L + + VNE +T+ P +YA
Sbjct: 259 ---AVVRLKSGSVIQTDXLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQTSDPHIYA 315
Query: 1339 GGD 1341
GD
Sbjct: 316 IGD 318
>pdb|1GXF|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
pdb|1GXF|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
Length = 492
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 84/193 (43%), Gaps = 27/193 (13%)
Query: 138 IDFTKIYLATGSSPRT-----ISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSF 192
++ I LA+GS P I N+ FYL P V+ +G F
Sbjct: 152 LETEHILLASGSWPHMPNIPGIEHCISSNEAFYLPE------------PPRRVLTVGGGF 199
Query: 193 IGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSS 249
I +E A F A K K VT+ RG + + + E +TK + G++ + K N +
Sbjct: 200 ISVEFAGIFNAYKPKDGQVTLCYRGEMILR-GFDHTLREELTKQLTANGIQILTKENPAK 258
Query: 250 FEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVEL-NGQKAVVVNEYL 306
E N + ++G + DLV++ IG T L GV + NG V V+EY
Sbjct: 259 VELNADGS-KSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQNAGVMIKNG--GVQVDEYS 315
Query: 307 ETNVPGVYAGGDI 319
TNV +YA GD+
Sbjct: 316 RTNVSNIYAIGDV 328
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 84/193 (43%), Gaps = 27/193 (13%)
Query: 690 IDFTKIYLATGSSPRT-----ISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSF 744
++ I LA+GS P I N+ FYL P V+ +G F
Sbjct: 152 LETEHILLASGSWPHMPNIPGIEHCISSNEAFYLPE------------PPRRVLTVGGGF 199
Query: 745 IGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSS 801
I +E A F A K K VT+ RG + + + E +TK + G++ + K N +
Sbjct: 200 ISVEFAGIFNAYKPKDGQVTLCYRGEMILR-GFDHTLREELTKQLTANGIQILTKENPAK 258
Query: 802 FEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVEL-NGQKAVVVNEYL 858
E N + ++G + DLV++ IG T L GV + NG V V+EY
Sbjct: 259 VELNADGS-KSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQNAGVMIKNG--GVQVDEYS 315
Query: 859 ETNVPGVYAGGDI 871
TNV +YA GD+
Sbjct: 316 RTNVSNIYAIGDV 328
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 84/193 (43%), Gaps = 27/193 (13%)
Query: 1161 IDFTKIYLATGSSPRT-----ISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSF 1215
++ I LA+GS P I N+ FYL P V+ +G F
Sbjct: 152 LETEHILLASGSWPHMPNIPGIEHCISSNEAFYLPE------------PPRRVLTVGGGF 199
Query: 1216 IGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSS 1272
I +E A F A K K VT+ RG + + + E +TK + G++ + K N +
Sbjct: 200 ISVEFAGIFNAYKPKDGQVTLCYRGEMILR-GFDHTLREELTKQLTANGIQILTKENPAK 258
Query: 1273 FEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVEL-NGQKAVVVNEYL 1329
E N + ++G + DLV++ IG T L GV + NG V V+EY
Sbjct: 259 VELNADGS-KSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQNAGVMIKNG--GVQVDEYS 315
Query: 1330 ETNVPGVYAGGDI 1342
TNV +YA GD+
Sbjct: 316 RTNVSNIYAIGDV 328
>pdb|1BZL|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
pdb|1BZL|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
Length = 486
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 84/193 (43%), Gaps = 27/193 (13%)
Query: 138 IDFTKIYLATGSSPRT-----ISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSF 192
++ I LA+GS P I N+ FYL P V+ +G F
Sbjct: 151 LETEHILLASGSWPHMPNIPGIEHCISSNEAFYLPE------------PPRRVLTVGGGF 198
Query: 193 IGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSS 249
I +E A F A K K VT+ RG + + + E +TK + G++ + K N +
Sbjct: 199 ISVEFAGIFNAYKPKDGQVTLCYRGEMILR-GFDHTLREELTKQLTANGIQILTKENPAK 257
Query: 250 FEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVEL-NGQKAVVVNEYL 306
E N + ++G + DLV++ IG T L GV + NG V V+EY
Sbjct: 258 VELNADGS-KSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQNAGVMIKNG--GVQVDEYS 314
Query: 307 ETNVPGVYAGGDI 319
TNV +YA GD+
Sbjct: 315 RTNVSNIYAIGDV 327
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 84/193 (43%), Gaps = 27/193 (13%)
Query: 690 IDFTKIYLATGSSPRT-----ISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSF 744
++ I LA+GS P I N+ FYL P V+ +G F
Sbjct: 151 LETEHILLASGSWPHMPNIPGIEHCISSNEAFYLPE------------PPRRVLTVGGGF 198
Query: 745 IGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSS 801
I +E A F A K K VT+ RG + + + E +TK + G++ + K N +
Sbjct: 199 ISVEFAGIFNAYKPKDGQVTLCYRGEMILR-GFDHTLREELTKQLTANGIQILTKENPAK 257
Query: 802 FEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVEL-NGQKAVVVNEYL 858
E N + ++G + DLV++ IG T L GV + NG V V+EY
Sbjct: 258 VELNADGS-KSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQNAGVMIKNG--GVQVDEYS 314
Query: 859 ETNVPGVYAGGDI 871
TNV +YA GD+
Sbjct: 315 RTNVSNIYAIGDV 327
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 84/193 (43%), Gaps = 27/193 (13%)
Query: 1161 IDFTKIYLATGSSPRT-----ISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSF 1215
++ I LA+GS P I N+ FYL P V+ +G F
Sbjct: 151 LETEHILLASGSWPHMPNIPGIEHCISSNEAFYLPE------------PPRRVLTVGGGF 198
Query: 1216 IGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSS 1272
I +E A F A K K VT+ RG + + + E +TK + G++ + K N +
Sbjct: 199 ISVEFAGIFNAYKPKDGQVTLCYRGEMILR-GFDHTLREELTKQLTANGIQILTKENPAK 257
Query: 1273 FEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVEL-NGQKAVVVNEYL 1329
E N + ++G + DLV++ IG T L GV + NG V V+EY
Sbjct: 258 VELNADGS-KSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQNAGVMIKNG--GVQVDEYS 314
Query: 1330 ETNVPGVYAGGDI 1342
TNV +YA GD+
Sbjct: 315 RTNVSNIYAIGDV 327
>pdb|1AOG|A Chain A, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
pdb|1AOG|B Chain B, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
Length = 485
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 84/193 (43%), Gaps = 27/193 (13%)
Query: 138 IDFTKIYLATGSSPRT-----ISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSF 192
++ I LA+GS P I N+ FYL P V+ +G F
Sbjct: 150 LETEHILLASGSWPHMPNIPGIEHCISSNEAFYLPE------------PPRRVLTVGGGF 197
Query: 193 IGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSS 249
I +E A F A K K VT+ RG + + + E +TK + G++ + K N +
Sbjct: 198 ISVEFAGIFNAYKPKDGQVTLCYRGEMILR-GFDHTLREELTKQLTANGIQILTKENPAK 256
Query: 250 FEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVEL-NGQKAVVVNEYL 306
E N + ++G + DLV++ IG T L GV + NG V V+EY
Sbjct: 257 VELNADGS-KSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQNAGVMIKNG--GVQVDEYS 313
Query: 307 ETNVPGVYAGGDI 319
TNV +YA GD+
Sbjct: 314 RTNVSNIYAIGDV 326
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 84/193 (43%), Gaps = 27/193 (13%)
Query: 690 IDFTKIYLATGSSPRT-----ISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSF 744
++ I LA+GS P I N+ FYL P V+ +G F
Sbjct: 150 LETEHILLASGSWPHMPNIPGIEHCISSNEAFYLPE------------PPRRVLTVGGGF 197
Query: 745 IGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSS 801
I +E A F A K K VT+ RG + + + E +TK + G++ + K N +
Sbjct: 198 ISVEFAGIFNAYKPKDGQVTLCYRGEMILR-GFDHTLREELTKQLTANGIQILTKENPAK 256
Query: 802 FEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVEL-NGQKAVVVNEYL 858
E N + ++G + DLV++ IG T L GV + NG V V+EY
Sbjct: 257 VELNADGS-KSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQNAGVMIKNG--GVQVDEYS 313
Query: 859 ETNVPGVYAGGDI 871
TNV +YA GD+
Sbjct: 314 RTNVSNIYAIGDV 326
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 84/193 (43%), Gaps = 27/193 (13%)
Query: 1161 IDFTKIYLATGSSPRT-----ISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSF 1215
++ I LA+GS P I N+ FYL P V+ +G F
Sbjct: 150 LETEHILLASGSWPHMPNIPGIEHCISSNEAFYLPE------------PPRRVLTVGGGF 197
Query: 1216 IGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSS 1272
I +E A F A K K VT+ RG + + + E +TK + G++ + K N +
Sbjct: 198 ISVEFAGIFNAYKPKDGQVTLCYRGEMILR-GFDHTLREELTKQLTANGIQILTKENPAK 256
Query: 1273 FEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVEL-NGQKAVVVNEYL 1329
E N + ++G + DLV++ IG T L GV + NG V V+EY
Sbjct: 257 VELNADGS-KSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQNAGVMIKNG--GVQVDEYS 313
Query: 1330 ETNVPGVYAGGDI 1342
TNV +YA GD+
Sbjct: 314 RTNVSNIYAIGDV 326
>pdb|2R9Z|A Chain A, Glutathione Amide Reductase From Chromatium Gracile
pdb|2R9Z|B Chain B, Glutathione Amide Reductase From Chromatium Gracile
pdb|2RAB|A Chain A, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
pdb|2RAB|B Chain B, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
Length = 463
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 184 NVVVIGSSFIGMEAAAFCASKVKSVTVVG---RGAVPFQESLGKEVGERITKLFESKGVK 240
V +IG+ +IG+E A S VTVV R F L + E + ++G++
Sbjct: 168 RVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENM----HAQGIE 223
Query: 241 FVMKANVSSFEKNEKNDVTAANLDNGTTIPA-DLVIVGIGTVLNTN--YLDGKGVELNGQ 297
++ V++ E++ + A +GT + D VI +G NT L+ G+E+
Sbjct: 224 THLEFAVAALERDAQGTTLVAQ--DGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSN 281
Query: 298 KAVVVNEYLETNVPGVYAGGDI 319
V + Y TNVPGVYA GDI
Sbjct: 282 GMVPTDAYQNTNVPGVYALGDI 303
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 736 NVVVIGSSFIGMEAAAFCASKVKSVTVVG---RGAVPFQESLGKEVGERITKLFESKGVK 792
V +IG+ +IG+E A S VTVV R F L + E + ++G++
Sbjct: 168 RVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENM----HAQGIE 223
Query: 793 FVMKANVSSFEKNEKNDVTAANLDNGTTIPA-DLVIVGIGTVLNTN--YLDGKGVELNGQ 849
++ V++ E++ + A +GT + D VI +G NT L+ G+E+
Sbjct: 224 THLEFAVAALERDAQGTTLVAQ--DGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSN 281
Query: 850 KAVVVNEYLETNVPGVYAGGDI 871
V + Y TNVPGVYA GDI
Sbjct: 282 GMVPTDAYQNTNVPGVYALGDI 303
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 1207 NVVVIGSSFIGMEAAAFCASKVKSVTVVG---RGAVPFQESLGKEVGERITKLFESKGVK 1263
V +IG+ +IG+E A S VTVV R F L + E + ++G++
Sbjct: 168 RVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENM----HAQGIE 223
Query: 1264 FVMKANVSSFEKNEKNDVTAANLDNGTTIPA-DLVIVGIGTVLNTN--YLDGKGVELNGQ 1320
++ V++ E++ + A +GT + D VI +G NT L+ G+E+
Sbjct: 224 THLEFAVAALERDAQGTTLVAQ--DGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSN 281
Query: 1321 KAVVVNEYLETNVPGVYAGGDI 1342
V + Y TNVPGVYA GDI
Sbjct: 282 GMVPTDAYQNTNVPGVYALGDI 303
>pdb|3DGZ|A Chain A, Crystal Structure Of Mouse Mitochondrial Thioredoxin
Reductase, C- Terminal 3-Residue Truncation
Length = 488
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 28/199 (14%)
Query: 136 TSIDFTKIYLATGSSPRTISQADGV-------NKVFYLRTVEDANNIAPHITPESNVVVI 188
T + I +ATG PR +Q G + +F+L+ +P +V+
Sbjct: 144 TLLSAEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKE-----------SP-GKTLVV 191
Query: 189 GSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVS 248
G+S++ +E A F TV+ R ++P + +++ +T+ ES G +F+ S
Sbjct: 192 GASYVALECAGFLTGIGLDTTVMMR-SIPLR-GFDQQMSSLVTEHMESHGTQFLKGCVPS 249
Query: 249 SFEKNEKNDVTAANLDNGT----TIPADLVIVGIGTVLNTNYL--DGKGVELNGQ-KAVV 301
+K N + D+ + T D V+ IG V T L + G+ N + + ++
Sbjct: 250 HIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKII 309
Query: 302 VNEYLETNVPGVYAGGDIA 320
V+ T+VP +YA GD+A
Sbjct: 310 VDAQEATSVPHIYAIGDVA 328
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 28/199 (14%)
Query: 688 TSIDFTKIYLATGSSPRTISQADGV-------NKVFYLRTVEDANNIAPHITPESNVVVI 740
T + I +ATG PR +Q G + +F+L+ +P +V+
Sbjct: 144 TLLSAEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKE-----------SP-GKTLVV 191
Query: 741 GSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVS 800
G+S++ +E A F TV+ R ++P + +++ +T+ ES G +F+ S
Sbjct: 192 GASYVALECAGFLTGIGLDTTVMMR-SIPLR-GFDQQMSSLVTEHMESHGTQFLKGCVPS 249
Query: 801 SFEKNEKNDVTAANLDNGT----TIPADLVIVGIGTVLNTNYL--DGKGVELNGQ-KAVV 853
+K N + D+ + T D V+ IG V T L + G+ N + + ++
Sbjct: 250 HIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKII 309
Query: 854 VNEYLETNVPGVYAGGDIA 872
V+ T+VP +YA GD+A
Sbjct: 310 VDAQEATSVPHIYAIGDVA 328
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 28/199 (14%)
Query: 1159 TSIDFTKIYLATGSSPRTISQADGV-------NKVFYLRTVEDANNIAPHITPESNVVVI 1211
T + I +ATG PR +Q G + +F+L+ +P +V+
Sbjct: 144 TLLSAEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKE-----------SP-GKTLVV 191
Query: 1212 GSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVS 1271
G+S++ +E A F TV+ R ++P + +++ +T+ ES G +F+ S
Sbjct: 192 GASYVALECAGFLTGIGLDTTVMMR-SIPLR-GFDQQMSSLVTEHMESHGTQFLKGCVPS 249
Query: 1272 SFEKNEKNDVTAANLDNGT----TIPADLVIVGIGTVLNTNYL--DGKGVELNGQ-KAVV 1324
+K N + D+ + T D V+ IG V T L + G+ N + + ++
Sbjct: 250 HIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKII 309
Query: 1325 VNEYLETNVPGVYAGGDIA 1343
V+ T+VP +YA GD+A
Sbjct: 310 VDAQEATSVPHIYAIGDVA 328
>pdb|1XDI|A Chain A, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
pdb|1XDI|B Chain B, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
Length = 499
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 25/241 (10%)
Query: 111 IHVIKGKKIISDSE--LNEKKIKL--QDGTSIDFTK--IYLATGSSPRTI--SQADGVNK 162
+ VI G+ + DS L +IK DG++ + + +ATG+SPR + +Q DG +
Sbjct: 110 VQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRILPSAQPDG-ER 168
Query: 163 VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRG--AVPFQE 220
+ R + D + + H+ +V+GS G E VTVV +P+++
Sbjct: 169 ILTWRQLYDLDALPDHL------IVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYED 222
Query: 221 SLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGT 280
+ V E + F +GV+ A +S + + + +G T+ ++ IG+
Sbjct: 223 ADAALVLE---ESFAERGVRLFKNARAASVTRTGAGVLV--TMTDGRTVEGSHALMTIGS 277
Query: 281 VLNTNYL--DGKGVELNGQKAVVVNEYLETNVPGVYAGGDI-AYAPLHSFYNKNASIGHY 337
V NT+ L + G++L + V+ T G+YA GD PL S I Y
Sbjct: 278 VPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATGIYAAGDCTGLLPLASVAAMQGRIAMY 337
Query: 338 Q 338
Sbjct: 338 H 338
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 25/241 (10%)
Query: 663 IHVIKGKKIISDSE--LNEKKIKL--QDGTSIDFTK--IYLATGSSPRTI--SQADGVNK 714
+ VI G+ + DS L +IK DG++ + + +ATG+SPR + +Q DG +
Sbjct: 110 VQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRILPSAQPDG-ER 168
Query: 715 VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRG--AVPFQE 772
+ R + D + + H+ +V+GS G E VTVV +P+++
Sbjct: 169 ILTWRQLYDLDALPDHL------IVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYED 222
Query: 773 SLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGT 832
+ V E + F +GV+ A +S + + + +G T+ ++ IG+
Sbjct: 223 ADAALVLE---ESFAERGVRLFKNARAASVTRTGAGVLV--TMTDGRTVEGSHALMTIGS 277
Query: 833 VLNTNYL--DGKGVELNGQKAVVVNEYLETNVPGVYAGGDI-AYAPLHSFYNKNASIGHY 889
V NT+ L + G++L + V+ T G+YA GD PL S I Y
Sbjct: 278 VPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATGIYAAGDCTGLLPLASVAAMQGRIAMY 337
Query: 890 Q 890
Sbjct: 338 H 338
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 25/241 (10%)
Query: 1134 IHVIKGKKIISDSE--LNEKKIKL--QDGTSIDFTK--IYLATGSSPRTI--SQADGVNK 1185
+ VI G+ + DS L +IK DG++ + + +ATG+SPR + +Q DG +
Sbjct: 110 VQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRILPSAQPDG-ER 168
Query: 1186 VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRG--AVPFQE 1243
+ R + D + + H+ +V+GS G E VTVV +P+++
Sbjct: 169 ILTWRQLYDLDALPDHL------IVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYED 222
Query: 1244 SLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGT 1303
+ V E + F +GV+ A +S + + + +G T+ ++ IG+
Sbjct: 223 ADAALVLE---ESFAERGVRLFKNARAASVTRTGAGVLV--TMTDGRTVEGSHALMTIGS 277
Query: 1304 VLNTNYL--DGKGVELNGQKAVVVNEYLETNVPGVYAGGDI-AYAPLHSFYNKNASIGHY 1360
V NT+ L + G++L + V+ T G+YA GD PL S I Y
Sbjct: 278 VPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATGIYAAGDCTGLLPLASVAAMQGRIAMY 337
Query: 1361 Q 1361
Sbjct: 338 H 338
>pdb|1ZDL|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
pdb|1ZKQ|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
Length = 517
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 28/199 (14%)
Query: 136 TSIDFTKIYLATGSSPRTISQADGV-------NKVFYLRTVEDANNIAPHITPESNVVVI 188
T + I +ATG PR +Q G + +F+L+ +P +V+
Sbjct: 170 TLLSAEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKE-----------SP-GKTLVV 217
Query: 189 GSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVS 248
G+S++ +E A F TV+ R ++P + +++ +T+ ES G +F+ S
Sbjct: 218 GASYVALECAGFLTGIGLDTTVMMR-SIPLR-GFDQQMSSLVTEHMESHGTQFLKGCVPS 275
Query: 249 SFEKNEKNDVTAANLDNGT----TIPADLVIVGIGTVLNTNYL--DGKGVELNGQ-KAVV 301
+K N + D+ + T D V+ IG V T L + G+ N + + ++
Sbjct: 276 HIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKII 335
Query: 302 VNEYLETNVPGVYAGGDIA 320
V+ T+VP +YA GD+A
Sbjct: 336 VDAQEATSVPHIYAIGDVA 354
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 28/199 (14%)
Query: 688 TSIDFTKIYLATGSSPRTISQADGV-------NKVFYLRTVEDANNIAPHITPESNVVVI 740
T + I +ATG PR +Q G + +F+L+ +P +V+
Sbjct: 170 TLLSAEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKE-----------SP-GKTLVV 217
Query: 741 GSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVS 800
G+S++ +E A F TV+ R ++P + +++ +T+ ES G +F+ S
Sbjct: 218 GASYVALECAGFLTGIGLDTTVMMR-SIPLR-GFDQQMSSLVTEHMESHGTQFLKGCVPS 275
Query: 801 SFEKNEKNDVTAANLDNGT----TIPADLVIVGIGTVLNTNYL--DGKGVELNGQ-KAVV 853
+K N + D+ + T D V+ IG V T L + G+ N + + ++
Sbjct: 276 HIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKII 335
Query: 854 VNEYLETNVPGVYAGGDIA 872
V+ T+VP +YA GD+A
Sbjct: 336 VDAQEATSVPHIYAIGDVA 354
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 28/199 (14%)
Query: 1159 TSIDFTKIYLATGSSPRTISQADGV-------NKVFYLRTVEDANNIAPHITPESNVVVI 1211
T + I +ATG PR +Q G + +F+L+ +P +V+
Sbjct: 170 TLLSAEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKE-----------SP-GKTLVV 217
Query: 1212 GSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVS 1271
G+S++ +E A F TV+ R ++P + +++ +T+ ES G +F+ S
Sbjct: 218 GASYVALECAGFLTGIGLDTTVMMR-SIPLR-GFDQQMSSLVTEHMESHGTQFLKGCVPS 275
Query: 1272 SFEKNEKNDVTAANLDNGT----TIPADLVIVGIGTVLNTNYL--DGKGVELNGQ-KAVV 1324
+K N + D+ + T D V+ IG V T L + G+ N + + ++
Sbjct: 276 HIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKII 335
Query: 1325 VNEYLETNVPGVYAGGDIA 1343
V+ T+VP +YA GD+A
Sbjct: 336 VDAQEATSVPHIYAIGDVA 354
>pdb|2V3A|A Chain A, Crystal Structure Of Rubredoxin Reductase From Pseudomonas
Aeruginosa.
pdb|2V3B|A Chain A, Crystal Structure Of The Electron Transfer Complex
Rubredoxin - Rubredoxin Reductase From Pseudomonas
Aeruginosa
Length = 384
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 5/184 (2%)
Query: 138 IDFTKIYLATGSSP-RTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGME 196
+ + + LA G+ P R + D + ++ + +ED + V+++G+ IG E
Sbjct: 100 VRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCE 159
Query: 197 AAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKN 256
A +S + VV L + + E GV+F + ++S +K
Sbjct: 160 FANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKK--AG 217
Query: 257 DVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAG 316
+ A+L +G IP DLV+ +G T G+ +N + +VV+ L T+ +YA
Sbjct: 218 EGLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVN--RGIVVDRSLRTSHANIYAL 275
Query: 317 GDIA 320
GD A
Sbjct: 276 GDCA 279
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 5/184 (2%)
Query: 690 IDFTKIYLATGSSP-RTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGME 748
+ + + LA G+ P R + D + ++ + +ED + V+++G+ IG E
Sbjct: 100 VRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCE 159
Query: 749 AAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKN 808
A +S + VV L + + E GV+F + ++S +K
Sbjct: 160 FANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKK--AG 217
Query: 809 DVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAG 868
+ A+L +G IP DLV+ +G T G+ +N + +VV+ L T+ +YA
Sbjct: 218 EGLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVN--RGIVVDRSLRTSHANIYAL 275
Query: 869 GDIA 872
GD A
Sbjct: 276 GDCA 279
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 5/184 (2%)
Query: 1161 IDFTKIYLATGSSP-RTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGME 1219
+ + + LA G+ P R + D + ++ + +ED + V+++G+ IG E
Sbjct: 100 VRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCE 159
Query: 1220 AAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKN 1279
A +S + VV L + + E GV+F + ++S +K
Sbjct: 160 FANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKK--AG 217
Query: 1280 DVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAG 1339
+ A+L +G IP DLV+ +G T G+ +N + +VV+ L T+ +YA
Sbjct: 218 EGLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVN--RGIVVDRSLRTSHANIYAL 275
Query: 1340 GDIA 1343
GD A
Sbjct: 276 GDCA 279
>pdb|3OC4|A Chain A, Crystal Structure Of A Pyridine Nucleotide-Disulfide
Family Oxidoreductase From The Enterococcus Faecalis
V583
pdb|3OC4|B Chain B, Crystal Structure Of A Pyridine Nucleotide-Disulfide
Family Oxidoreductase From The Enterococcus Faecalis
V583
Length = 452
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 7/220 (3%)
Query: 102 TEEFYKDNDIHVIKGKKIISDSELNE--KKIKLQDGTSIDFTKIYLATGSSP-RTISQAD 158
TEE + I ++ +++++ N+ + ++ + K+ LATG+S T +
Sbjct: 64 TEEELRRQKIQLLLNREVVAXDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRGS 123
Query: 159 GVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPF 218
K+ + + A P + V VIG+ IG EA F K+V V
Sbjct: 124 QTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGXEAIDFLVKXKKTVHVFESLENLL 183
Query: 219 QESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGI 278
+ KE + K E + V F + V E+ V + I D I +
Sbjct: 184 PKYFDKEXVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQE---ISCDSGIFAL 240
Query: 279 GTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 318
YLD K ++ N + + V+ YL+T+VP V+A GD
Sbjct: 241 NLHPQLAYLDKK-IQRNLDQTIAVDAYLQTSVPNVFAIGD 279
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 7/220 (3%)
Query: 654 TEEFYKDNDIHVIKGKKIISDSELNE--KKIKLQDGTSIDFTKIYLATGSSP-RTISQAD 710
TEE + I ++ +++++ N+ + ++ + K+ LATG+S T +
Sbjct: 64 TEEELRRQKIQLLLNREVVAXDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRGS 123
Query: 711 GVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPF 770
K+ + + A P + V VIG+ IG EA F K+V V
Sbjct: 124 QTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGXEAIDFLVKXKKTVHVFESLENLL 183
Query: 771 QESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGI 830
+ KE + K E + V F + V E+ V + I D I +
Sbjct: 184 PKYFDKEXVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQE---ISCDSGIFAL 240
Query: 831 GTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 870
YLD K ++ N + + V+ YL+T+VP V+A GD
Sbjct: 241 NLHPQLAYLDKK-IQRNLDQTIAVDAYLQTSVPNVFAIGD 279
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 7/220 (3%)
Query: 1125 TEEFYKDNDIHVIKGKKIISDSELNE--KKIKLQDGTSIDFTKIYLATGSSP-RTISQAD 1181
TEE + I ++ +++++ N+ + ++ + K+ LATG+S T +
Sbjct: 64 TEEELRRQKIQLLLNREVVAXDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRGS 123
Query: 1182 GVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPF 1241
K+ + + A P + V VIG+ IG EA F K+V V
Sbjct: 124 QTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGXEAIDFLVKXKKTVHVFESLENLL 183
Query: 1242 QESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGI 1301
+ KE + K E + V F + V E+ V + I D I +
Sbjct: 184 PKYFDKEXVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQE---ISCDSGIFAL 240
Query: 1302 GTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 1341
YLD K ++ N + + V+ YL+T+VP V+A GD
Sbjct: 241 NLHPQLAYLDKK-IQRNLDQTIAVDAYLQTSVPNVFAIGD 279
>pdb|3RNM|A Chain A, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|B Chain B, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|C Chain C, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|D Chain D, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
Length = 495
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 113/262 (43%), Gaps = 38/262 (14%)
Query: 84 RVKLSKQLDIKADSILLRT---EEFYKDNDI-HVIKGKKIISDSELNEKKIKLQDGTS-- 137
R+ L K ++ K+ ++ T +K N + HV KI +++ K DG +
Sbjct: 103 RLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATK---ADGGTQV 159
Query: 138 IDFTKIYLATGSS----PRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFI 193
ID I +ATGS P D + V ++ PE +VVIG+ I
Sbjct: 160 IDTKNILIATGSEVTPFPGITIDEDTI--------VSSTGALSLKKVPE-KMVVIGAGVI 210
Query: 194 GMEAAAFCASKVKSVTVVGRGAVPFQESLG-----KEVGERITKLFESKGVKFVMKANVS 248
G+E + VT AV F +G E+ + ++ + +G KF + V+
Sbjct: 211 GVELGSVWQRLGADVT-----AVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVT 265
Query: 249 SFEKNE--KNDVT--AANLDNGTTIPADLVIVGIGTVLNTNYL--DGKGVELNGQKAVVV 302
K K DV+ AA+ I D+++V IG T L + G+EL+ + + V
Sbjct: 266 GATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPV 325
Query: 303 NEYLETNVPGVYAGGDIAYAPL 324
N +T +P +YA GD+ P+
Sbjct: 326 NTRFQTKIPNIYAIGDVVAGPM 347
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 113/262 (43%), Gaps = 38/262 (14%)
Query: 636 RVKLSKQLDIKADSILLRT---EEFYKDNDI-HVIKGKKIISDSELNEKKIKLQDGTS-- 689
R+ L K ++ K+ ++ T +K N + HV KI +++ K DG +
Sbjct: 103 RLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATK---ADGGTQV 159
Query: 690 IDFTKIYLATGSS----PRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFI 745
ID I +ATGS P D + V ++ PE +VVIG+ I
Sbjct: 160 IDTKNILIATGSEVTPFPGITIDEDTI--------VSSTGALSLKKVPE-KMVVIGAGVI 210
Query: 746 GMEAAAFCASKVKSVTVVGRGAVPFQESLG-----KEVGERITKLFESKGVKFVMKANVS 800
G+E + VT AV F +G E+ + ++ + +G KF + V+
Sbjct: 211 GVELGSVWQRLGADVT-----AVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVT 265
Query: 801 SFEKNE--KNDVT--AANLDNGTTIPADLVIVGIGTVLNTNYL--DGKGVELNGQKAVVV 854
K K DV+ AA+ I D+++V IG T L + G+EL+ + + V
Sbjct: 266 GATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPV 325
Query: 855 NEYLETNVPGVYAGGDIAYAPL 876
N +T +P +YA GD+ P+
Sbjct: 326 NTRFQTKIPNIYAIGDVVAGPM 347
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 113/262 (43%), Gaps = 38/262 (14%)
Query: 1107 RVKLSKQLDIKADSILLRT---EEFYKDNDI-HVIKGKKIISDSELNEKKIKLQDGTS-- 1160
R+ L K ++ K+ ++ T +K N + HV KI +++ K DG +
Sbjct: 103 RLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATK---ADGGTQV 159
Query: 1161 IDFTKIYLATGSS----PRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFI 1216
ID I +ATGS P D + V ++ PE +VVIG+ I
Sbjct: 160 IDTKNILIATGSEVTPFPGITIDEDTI--------VSSTGALSLKKVPE-KMVVIGAGVI 210
Query: 1217 GMEAAAFCASKVKSVTVVGRGAVPFQESLG-----KEVGERITKLFESKGVKFVMKANVS 1271
G+E + VT AV F +G E+ + ++ + +G KF + V+
Sbjct: 211 GVELGSVWQRLGADVT-----AVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVT 265
Query: 1272 SFEKNE--KNDVT--AANLDNGTTIPADLVIVGIGTVLNTNYL--DGKGVELNGQKAVVV 1325
K K DV+ AA+ I D+++V IG T L + G+EL+ + + V
Sbjct: 266 GATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPV 325
Query: 1326 NEYLETNVPGVYAGGDIAYAPL 1347
N +T +P +YA GD+ P+
Sbjct: 326 NTRFQTKIPNIYAIGDVVAGPM 347
>pdb|1ZMC|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMD|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|2F5Z|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|I Chain I, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|J Chain J, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
Length = 474
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 113/262 (43%), Gaps = 38/262 (14%)
Query: 84 RVKLSKQLDIKADSILLRT---EEFYKDNDI-HVIKGKKIISDSELNEKKIKLQDGTS-- 137
R+ L K ++ K+ ++ T +K N + HV KI +++ K DG +
Sbjct: 82 RLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATK---ADGGTQV 138
Query: 138 IDFTKIYLATGSS----PRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFI 193
ID I +ATGS P D + V ++ PE +VVIG+ I
Sbjct: 139 IDTKNILIATGSEVTPFPGITIDEDTI--------VSSTGALSLKKVPE-KMVVIGAGVI 189
Query: 194 GMEAAAFCASKVKSVTVVGRGAVPFQESLG-----KEVGERITKLFESKGVKFVMKANVS 248
G+E + VT AV F +G E+ + ++ + +G KF + V+
Sbjct: 190 GVELGSVWQRLGADVT-----AVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVT 244
Query: 249 SFEKNE--KNDVT--AANLDNGTTIPADLVIVGIGTVLNTNYL--DGKGVELNGQKAVVV 302
K K DV+ AA+ I D+++V IG T L + G+EL+ + + V
Sbjct: 245 GATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPV 304
Query: 303 NEYLETNVPGVYAGGDIAYAPL 324
N +T +P +YA GD+ P+
Sbjct: 305 NTRFQTKIPNIYAIGDVVAGPM 326
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 113/262 (43%), Gaps = 38/262 (14%)
Query: 636 RVKLSKQLDIKADSILLRT---EEFYKDNDI-HVIKGKKIISDSELNEKKIKLQDGTS-- 689
R+ L K ++ K+ ++ T +K N + HV KI +++ K DG +
Sbjct: 82 RLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATK---ADGGTQV 138
Query: 690 IDFTKIYLATGSS----PRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFI 745
ID I +ATGS P D + V ++ PE +VVIG+ I
Sbjct: 139 IDTKNILIATGSEVTPFPGITIDEDTI--------VSSTGALSLKKVPE-KMVVIGAGVI 189
Query: 746 GMEAAAFCASKVKSVTVVGRGAVPFQESLG-----KEVGERITKLFESKGVKFVMKANVS 800
G+E + VT AV F +G E+ + ++ + +G KF + V+
Sbjct: 190 GVELGSVWQRLGADVT-----AVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVT 244
Query: 801 SFEKNE--KNDVT--AANLDNGTTIPADLVIVGIGTVLNTNYL--DGKGVELNGQKAVVV 854
K K DV+ AA+ I D+++V IG T L + G+EL+ + + V
Sbjct: 245 GATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPV 304
Query: 855 NEYLETNVPGVYAGGDIAYAPL 876
N +T +P +YA GD+ P+
Sbjct: 305 NTRFQTKIPNIYAIGDVVAGPM 326
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 113/262 (43%), Gaps = 38/262 (14%)
Query: 1107 RVKLSKQLDIKADSILLRT---EEFYKDNDI-HVIKGKKIISDSELNEKKIKLQDGTS-- 1160
R+ L K ++ K+ ++ T +K N + HV KI +++ K DG +
Sbjct: 82 RLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATK---ADGGTQV 138
Query: 1161 IDFTKIYLATGSS----PRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFI 1216
ID I +ATGS P D + V ++ PE +VVIG+ I
Sbjct: 139 IDTKNILIATGSEVTPFPGITIDEDTI--------VSSTGALSLKKVPE-KMVVIGAGVI 189
Query: 1217 GMEAAAFCASKVKSVTVVGRGAVPFQESLG-----KEVGERITKLFESKGVKFVMKANVS 1271
G+E + VT AV F +G E+ + ++ + +G KF + V+
Sbjct: 190 GVELGSVWQRLGADVT-----AVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVT 244
Query: 1272 SFEKNE--KNDVT--AANLDNGTTIPADLVIVGIGTVLNTNYL--DGKGVELNGQKAVVV 1325
K K DV+ AA+ I D+++V IG T L + G+EL+ + + V
Sbjct: 245 GATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPV 304
Query: 1326 NEYLETNVPGVYAGGDIAYAPL 1347
N +T +P +YA GD+ P+
Sbjct: 305 NTRFQTKIPNIYAIGDVVAGPM 326
>pdb|1ZY8|A Chain A, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|B Chain B, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|C Chain C, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|D Chain D, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|E Chain E, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|F Chain F, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|G Chain G, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|H Chain H, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|I Chain I, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|J Chain J, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex
Length = 474
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 30/258 (11%)
Query: 84 RVKLSKQLDIKADSILLRT---EEFYKDNDI-HVIKGKKIISDSELNEKKIKLQDGTS-- 137
R+ L K ++ K+ ++ T +K N + HV KI +++ K DG +
Sbjct: 82 RLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATK---ADGGTQV 138
Query: 138 IDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEA 197
ID I +ATGS ++ G+ + V ++ PE +VVIG+ IG+E
Sbjct: 139 IDTKNILIATGSE---VTPFPGIT-IDEDTIVSSTGALSLKKVPE-KMVVIGAGVIGVEL 193
Query: 198 AAFCASKVKSVTVVGRGAVPFQESLG-----KEVGERITKLFESKGVKFVMKANVSSFEK 252
+ VT AV F +G E+ + ++ + +G KF + V+ K
Sbjct: 194 GSVWQRLGADVT-----AVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATK 248
Query: 253 NE--KNDVT--AANLDNGTTIPADLVIVGIGTVLNTNYL--DGKGVELNGQKAVVVNEYL 306
K DV+ AA+ I D+++V IG T L + G+EL+ + + VN
Sbjct: 249 KSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRF 308
Query: 307 ETNVPGVYAGGDIAYAPL 324
+T +P +YA GD+ P+
Sbjct: 309 QTKIPNIYAIGDVVAGPM 326
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 30/258 (11%)
Query: 636 RVKLSKQLDIKADSILLRT---EEFYKDNDI-HVIKGKKIISDSELNEKKIKLQDGTS-- 689
R+ L K ++ K+ ++ T +K N + HV KI +++ K DG +
Sbjct: 82 RLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATK---ADGGTQV 138
Query: 690 IDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEA 749
ID I +ATGS ++ G+ + V ++ PE +VVIG+ IG+E
Sbjct: 139 IDTKNILIATGSE---VTPFPGIT-IDEDTIVSSTGALSLKKVPE-KMVVIGAGVIGVEL 193
Query: 750 AAFCASKVKSVTVVGRGAVPFQESLG-----KEVGERITKLFESKGVKFVMKANVSSFEK 804
+ VT AV F +G E+ + ++ + +G KF + V+ K
Sbjct: 194 GSVWQRLGADVT-----AVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATK 248
Query: 805 NE--KNDVT--AANLDNGTTIPADLVIVGIGTVLNTNYL--DGKGVELNGQKAVVVNEYL 858
K DV+ AA+ I D+++V IG T L + G+EL+ + + VN
Sbjct: 249 KSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRF 308
Query: 859 ETNVPGVYAGGDIAYAPL 876
+T +P +YA GD+ P+
Sbjct: 309 QTKIPNIYAIGDVVAGPM 326
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 30/258 (11%)
Query: 1107 RVKLSKQLDIKADSILLRT---EEFYKDNDI-HVIKGKKIISDSELNEKKIKLQDGTS-- 1160
R+ L K ++ K+ ++ T +K N + HV KI +++ K DG +
Sbjct: 82 RLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATK---ADGGTQV 138
Query: 1161 IDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEA 1220
ID I +ATGS ++ G+ + V ++ PE +VVIG+ IG+E
Sbjct: 139 IDTKNILIATGSE---VTPFPGIT-IDEDTIVSSTGALSLKKVPE-KMVVIGAGVIGVEL 193
Query: 1221 AAFCASKVKSVTVVGRGAVPFQESLG-----KEVGERITKLFESKGVKFVMKANVSSFEK 1275
+ VT AV F +G E+ + ++ + +G KF + V+ K
Sbjct: 194 GSVWQRLGADVT-----AVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATK 248
Query: 1276 NE--KNDVT--AANLDNGTTIPADLVIVGIGTVLNTNYL--DGKGVELNGQKAVVVNEYL 1329
K DV+ AA+ I D+++V IG T L + G+EL+ + + VN
Sbjct: 249 KSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRF 308
Query: 1330 ETNVPGVYAGGDIAYAPL 1347
+T +P +YA GD+ P+
Sbjct: 309 QTKIPNIYAIGDVVAGPM 326
>pdb|3EAN|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAO|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
Length = 499
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 16/152 (10%)
Query: 186 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAV--PFQESLGKEVGERITKLFESKGVKFVM 243
+V+G+S++ +E A F A VTV+ R + F + + ++GE + E G+KF+
Sbjct: 194 LVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM----EEHGIKFIR 249
Query: 244 KANVSSFEKNE-----KNDVTAANLDNGTTIPAD----LVIVGIGTVLNTNYLDGKGVEL 294
+ + E+ E + VTA + ++ TI + L+ VG + T L+ GV++
Sbjct: 250 QFVPTKIEQIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLAVGRDSCTRTIGLETVGVKI 309
Query: 295 NGQKA-VVVNEYLETNVPGVYAGGDIAYAPLH 325
N + + V + +TNVP +YA GDI L
Sbjct: 310 NEKTGKIPVTDEEQTNVPYIYAIGDILEGKLE 341
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 16/152 (10%)
Query: 738 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAV--PFQESLGKEVGERITKLFESKGVKFVM 795
+V+G+S++ +E A F A VTV+ R + F + + ++GE + E G+KF+
Sbjct: 194 LVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM----EEHGIKFIR 249
Query: 796 KANVSSFEKNE-----KNDVTAANLDNGTTIPAD----LVIVGIGTVLNTNYLDGKGVEL 846
+ + E+ E + VTA + ++ TI + L+ VG + T L+ GV++
Sbjct: 250 QFVPTKIEQIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLAVGRDSCTRTIGLETVGVKI 309
Query: 847 NGQKA-VVVNEYLETNVPGVYAGGDIAYAPLH 877
N + + V + +TNVP +YA GDI L
Sbjct: 310 NEKTGKIPVTDEEQTNVPYIYAIGDILEGKLE 341
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 16/152 (10%)
Query: 1209 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAV--PFQESLGKEVGERITKLFESKGVKFVM 1266
+V+G+S++ +E A F A VTV+ R + F + + ++GE + E G+KF+
Sbjct: 194 LVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM----EEHGIKFIR 249
Query: 1267 KANVSSFEKNE-----KNDVTAANLDNGTTIPAD----LVIVGIGTVLNTNYLDGKGVEL 1317
+ + E+ E + VTA + ++ TI + L+ VG + T L+ GV++
Sbjct: 250 QFVPTKIEQIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLAVGRDSCTRTIGLETVGVKI 309
Query: 1318 NGQKA-VVVNEYLETNVPGVYAGGDIAYAPLH 1348
N + + V + +TNVP +YA GDI L
Sbjct: 310 NEKTGKIPVTDEEQTNVPYIYAIGDILEGKLE 341
>pdb|1H6V|A Chain A, Mammalian Thioredoxin Reductase
pdb|1H6V|B Chain B, Mammalian Thioredoxin Reductase
pdb|1H6V|C Chain C, Mammalian Thioredoxin Reductase
pdb|1H6V|D Chain D, Mammalian Thioredoxin Reductase
pdb|1H6V|E Chain E, Mammalian Thioredoxin Reductase
pdb|1H6V|F Chain F, Mammalian Thioredoxin Reductase
Length = 499
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 16/152 (10%)
Query: 186 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAV--PFQESLGKEVGERITKLFESKGVKFVM 243
+V+G+S++ +E A F A VTV+ R + F + + ++GE + E G+KF+
Sbjct: 194 LVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM----EEHGIKFIR 249
Query: 244 KANVSSFEKNE-----KNDVTAANLDNGTTIPAD----LVIVGIGTVLNTNYLDGKGVEL 294
+ + E+ E + VTA + ++ TI + L+ VG + T L+ GV++
Sbjct: 250 QFVPTKIEQIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLAVGRDSCTRTIGLETVGVKI 309
Query: 295 NGQKA-VVVNEYLETNVPGVYAGGDIAYAPLH 325
N + + V + +TNVP +YA GDI L
Sbjct: 310 NEKTGKIPVTDEEQTNVPYIYAIGDILEGKLE 341
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 16/152 (10%)
Query: 738 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAV--PFQESLGKEVGERITKLFESKGVKFVM 795
+V+G+S++ +E A F A VTV+ R + F + + ++GE + E G+KF+
Sbjct: 194 LVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM----EEHGIKFIR 249
Query: 796 KANVSSFEKNE-----KNDVTAANLDNGTTIPAD----LVIVGIGTVLNTNYLDGKGVEL 846
+ + E+ E + VTA + ++ TI + L+ VG + T L+ GV++
Sbjct: 250 QFVPTKIEQIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLAVGRDSCTRTIGLETVGVKI 309
Query: 847 NGQKA-VVVNEYLETNVPGVYAGGDIAYAPLH 877
N + + V + +TNVP +YA GDI L
Sbjct: 310 NEKTGKIPVTDEEQTNVPYIYAIGDILEGKLE 341
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 16/152 (10%)
Query: 1209 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAV--PFQESLGKEVGERITKLFESKGVKFVM 1266
+V+G+S++ +E A F A VTV+ R + F + + ++GE + E G+KF+
Sbjct: 194 LVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM----EEHGIKFIR 249
Query: 1267 KANVSSFEKNE-----KNDVTAANLDNGTTIPAD----LVIVGIGTVLNTNYLDGKGVEL 1317
+ + E+ E + VTA + ++ TI + L+ VG + T L+ GV++
Sbjct: 250 QFVPTKIEQIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLAVGRDSCTRTIGLETVGVKI 309
Query: 1318 NGQKA-VVVNEYLETNVPGVYAGGDIAYAPLH 1348
N + + V + +TNVP +YA GDI L
Sbjct: 310 NEKTGKIPVTDEEQTNVPYIYAIGDILEGKLE 341
>pdb|1GER|A Chain A, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GER|B Chain B, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GET|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GET|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 16/225 (7%)
Query: 96 DSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTIS 155
D I E N++ VIKG D++ E +G +I I +ATG P S
Sbjct: 93 DRIHTSYENVLGKNNVDVIKGFARFVDAKTLE-----VNGETITADHILIATGGRP---S 144
Query: 156 QADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA 215
D + V Y ++ A PE V V+G+ +I +E A + R
Sbjct: 145 HPD-IPGVEY--GIDSDGFFALPALPE-RVAVVGAGYIAVELAGVINGLGAKTHLFVRKH 200
Query: 216 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 275
P + S + E + ++ ++G + A + KN +T L++G + D +I
Sbjct: 201 APLR-SFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTL-ELEDGRSETVDCLI 258
Query: 276 VGIG-TVLNTNY-LDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 318
IG N N L+ GV+ N + +VV++Y TN+ G+YA GD
Sbjct: 259 WAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGD 303
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 16/225 (7%)
Query: 648 DSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTIS 707
D I E N++ VIKG D++ E +G +I I +ATG P S
Sbjct: 93 DRIHTSYENVLGKNNVDVIKGFARFVDAKTLE-----VNGETITADHILIATGGRP---S 144
Query: 708 QADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA 767
D + V Y ++ A PE V V+G+ +I +E A + R
Sbjct: 145 HPD-IPGVEY--GIDSDGFFALPALPE-RVAVVGAGYIAVELAGVINGLGAKTHLFVRKH 200
Query: 768 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 827
P + S + E + ++ ++G + A + KN +T L++G + D +I
Sbjct: 201 APLR-SFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTL-ELEDGRSETVDCLI 258
Query: 828 VGIG-TVLNTNY-LDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 870
IG N N L+ GV+ N + +VV++Y TN+ G+YA GD
Sbjct: 259 WAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGD 303
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 16/225 (7%)
Query: 1119 DSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTIS 1178
D I E N++ VIKG D++ E +G +I I +ATG P S
Sbjct: 93 DRIHTSYENVLGKNNVDVIKGFARFVDAKTLE-----VNGETITADHILIATGGRP---S 144
Query: 1179 QADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA 1238
D + V Y ++ A PE V V+G+ +I +E A + R
Sbjct: 145 HPD-IPGVEY--GIDSDGFFALPALPE-RVAVVGAGYIAVELAGVINGLGAKTHLFVRKH 200
Query: 1239 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 1298
P + S + E + ++ ++G + A + KN +T L++G + D +I
Sbjct: 201 APLR-SFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTL-ELEDGRSETVDCLI 258
Query: 1299 VGIG-TVLNTNY-LDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 1341
IG N N L+ GV+ N + +VV++Y TN+ G+YA GD
Sbjct: 259 WAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGD 303
>pdb|1TYP|A Chain A, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
pdb|1TYP|B Chain B, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
Length = 487
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 24/193 (12%)
Query: 137 SIDFTKIYLATGSSPRTIS-QADGV----NKVFYLRTVEDANNIAPHITPESNVVVIGSS 191
++D I LATGS P+ + + D + N+ FYL + AP + +G
Sbjct: 150 TLDTEYILLATGSWPQHLGIEGDDLCITSNEAFYL-------DEAP-----KRALCVGGG 197
Query: 192 FIGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVS 248
+I +E A F A K + V + RG + + E+ +++T+ + G+ N +
Sbjct: 198 YISIEFAGIFNAYKARGGQVDLAYRGDMILR-GFDSELRKQLTEQLRANGINVRTHENPA 256
Query: 249 SFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV--LNTNYLDGKGVELNGQKAVVVNEYL 306
KN + ++G D+V++ IG V T LD GVE+ A+ V+ Y
Sbjct: 257 KVTKN-ADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLDKAGVEVAKNGAIKVDAYS 315
Query: 307 ETNVPGVYAGGDI 319
+TNV +YA GD+
Sbjct: 316 KTNVDNIYAIGDV 328
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 24/193 (12%)
Query: 689 SIDFTKIYLATGSSPRTIS-QADGV----NKVFYLRTVEDANNIAPHITPESNVVVIGSS 743
++D I LATGS P+ + + D + N+ FYL + AP + +G
Sbjct: 150 TLDTEYILLATGSWPQHLGIEGDDLCITSNEAFYL-------DEAP-----KRALCVGGG 197
Query: 744 FIGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVS 800
+I +E A F A K + V + RG + + E+ +++T+ + G+ N +
Sbjct: 198 YISIEFAGIFNAYKARGGQVDLAYRGDMILR-GFDSELRKQLTEQLRANGINVRTHENPA 256
Query: 801 SFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV--LNTNYLDGKGVELNGQKAVVVNEYL 858
KN + ++G D+V++ IG V T LD GVE+ A+ V+ Y
Sbjct: 257 KVTKN-ADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLDKAGVEVAKNGAIKVDAYS 315
Query: 859 ETNVPGVYAGGDI 871
+TNV +YA GD+
Sbjct: 316 KTNVDNIYAIGDV 328
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 24/193 (12%)
Query: 1160 SIDFTKIYLATGSSPRTIS-QADGV----NKVFYLRTVEDANNIAPHITPESNVVVIGSS 1214
++D I LATGS P+ + + D + N+ FYL + AP + +G
Sbjct: 150 TLDTEYILLATGSWPQHLGIEGDDLCITSNEAFYL-------DEAP-----KRALCVGGG 197
Query: 1215 FIGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVS 1271
+I +E A F A K + V + RG + + E+ +++T+ + G+ N +
Sbjct: 198 YISIEFAGIFNAYKARGGQVDLAYRGDMILR-GFDSELRKQLTEQLRANGINVRTHENPA 256
Query: 1272 SFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV--LNTNYLDGKGVELNGQKAVVVNEYL 1329
KN + ++G D+V++ IG V T LD GVE+ A+ V+ Y
Sbjct: 257 KVTKN-ADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLDKAGVEVAKNGAIKVDAYS 315
Query: 1330 ETNVPGVYAGGDI 1342
+TNV +YA GD+
Sbjct: 316 KTNVDNIYAIGDV 328
>pdb|3KD9|A Chain A, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
pdb|3KD9|B Chain B, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
pdb|3KD9|C Chain C, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
Length = 449
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 88/188 (46%), Gaps = 9/188 (4%)
Query: 137 SIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHITPE--SNVVVIGSSF 192
S ++ + A G+SP+ + +GVN VF DA I ++ NVV+IG +
Sbjct: 100 SYEWDYLVFANGASPQ-VPAIEGVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGY 158
Query: 193 IGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEK 252
IG+E A A++ K+VT++ RG + S KEV T + E K K V K
Sbjct: 159 IGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEV----TDILEEKLKKHVNLRLQEITMK 214
Query: 253 NEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPG 312
E + + + A+LVI+ G N GV + A+ NE ++T+V
Sbjct: 215 IEGEERVEKVVTDAGEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNEKMQTSVEN 274
Query: 313 VYAGGDIA 320
VYA GD+A
Sbjct: 275 VYAAGDVA 282
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 88/188 (46%), Gaps = 9/188 (4%)
Query: 689 SIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHITPE--SNVVVIGSSF 744
S ++ + A G+SP+ + +GVN VF DA I ++ NVV+IG +
Sbjct: 100 SYEWDYLVFANGASPQ-VPAIEGVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGY 158
Query: 745 IGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEK 804
IG+E A A++ K+VT++ RG + S KEV T + E K K V K
Sbjct: 159 IGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEV----TDILEEKLKKHVNLRLQEITMK 214
Query: 805 NEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPG 864
E + + + A+LVI+ G N GV + A+ NE ++T+V
Sbjct: 215 IEGEERVEKVVTDAGEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNEKMQTSVEN 274
Query: 865 VYAGGDIA 872
VYA GD+A
Sbjct: 275 VYAAGDVA 282
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 88/188 (46%), Gaps = 9/188 (4%)
Query: 1160 SIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHITPE--SNVVVIGSSF 1215
S ++ + A G+SP+ + +GVN VF DA I ++ NVV+IG +
Sbjct: 100 SYEWDYLVFANGASPQ-VPAIEGVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGY 158
Query: 1216 IGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEK 1275
IG+E A A++ K+VT++ RG + S KEV T + E K K V K
Sbjct: 159 IGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEV----TDILEEKLKKHVNLRLQEITMK 214
Query: 1276 NEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPG 1335
E + + + A+LVI+ G N GV + A+ NE ++T+V
Sbjct: 215 IEGEERVEKVVTDAGEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNEKMQTSVEN 274
Query: 1336 VYAGGDIA 1343
VYA GD+A
Sbjct: 275 VYAAGDVA 282
>pdb|1TYT|A Chain A, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
pdb|1TYT|B Chain B, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
Length = 487
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 24/193 (12%)
Query: 137 SIDFTKIYLATGSSPRTIS-QADGV----NKVFYLRTVEDANNIAPHITPESNVVVIGSS 191
++D I LATGS P+ + + D + N+ FYL + AP + +G
Sbjct: 150 TLDTEYILLATGSWPQHLGIEGDDLCITSNEAFYL-------DEAP-----KRALCVGGG 197
Query: 192 FIGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVS 248
+I +E A F A K + V + RG + + E+ +++T+ + G+ N +
Sbjct: 198 YISIEFAGIFNAYKARGGQVDLAYRGDMILR-GFDSELRKQLTEQLRANGINVRTHENPA 256
Query: 249 SFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV--LNTNYLDGKGVELNGQKAVVVNEYL 306
KN + ++G D+V++ IG V T LD GVE+ A+ V+ Y
Sbjct: 257 KVTKN-ADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLDKAGVEVAKNGAIKVDAYS 315
Query: 307 ETNVPGVYAGGDI 319
+TNV +YA GD+
Sbjct: 316 KTNVDNIYAIGDV 328
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 24/193 (12%)
Query: 689 SIDFTKIYLATGSSPRTIS-QADGV----NKVFYLRTVEDANNIAPHITPESNVVVIGSS 743
++D I LATGS P+ + + D + N+ FYL + AP + +G
Sbjct: 150 TLDTEYILLATGSWPQHLGIEGDDLCITSNEAFYL-------DEAP-----KRALCVGGG 197
Query: 744 FIGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVS 800
+I +E A F A K + V + RG + + E+ +++T+ + G+ N +
Sbjct: 198 YISIEFAGIFNAYKARGGQVDLAYRGDMILR-GFDSELRKQLTEQLRANGINVRTHENPA 256
Query: 801 SFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV--LNTNYLDGKGVELNGQKAVVVNEYL 858
KN + ++G D+V++ IG V T LD GVE+ A+ V+ Y
Sbjct: 257 KVTKN-ADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLDKAGVEVAKNGAIKVDAYS 315
Query: 859 ETNVPGVYAGGDI 871
+TNV +YA GD+
Sbjct: 316 KTNVDNIYAIGDV 328
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 24/193 (12%)
Query: 1160 SIDFTKIYLATGSSPRTIS-QADGV----NKVFYLRTVEDANNIAPHITPESNVVVIGSS 1214
++D I LATGS P+ + + D + N+ FYL + AP + +G
Sbjct: 150 TLDTEYILLATGSWPQHLGIEGDDLCITSNEAFYL-------DEAP-----KRALCVGGG 197
Query: 1215 FIGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVS 1271
+I +E A F A K + V + RG + + E+ +++T+ + G+ N +
Sbjct: 198 YISIEFAGIFNAYKARGGQVDLAYRGDMILR-GFDSELRKQLTEQLRANGINVRTHENPA 256
Query: 1272 SFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV--LNTNYLDGKGVELNGQKAVVVNEYL 1329
KN + ++G D+V++ IG V T LD GVE+ A+ V+ Y
Sbjct: 257 KVTKN-ADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLDKAGVEVAKNGAIKVDAYS 315
Query: 1330 ETNVPGVYAGGDI 1342
+TNV +YA GD+
Sbjct: 316 KTNVDNIYAIGDV 328
>pdb|3CTY|A Chain A, Crystal Structure Of T. Acidophilum Thioredoxin Reductase
pdb|3CTY|B Chain B, Crystal Structure Of T. Acidophilum Thioredoxin Reductase
Length = 319
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 184 NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGER-ITKLFESKGVKFV 242
VV IG G AA + VK+VT++ E + K + E + + + + ++
Sbjct: 157 RVVTIGGGNSGAIAAISMSEYVKNVTII--------EYMPKYMCENAYVQEIKKRNIPYI 208
Query: 243 MKANVSSFEKNEKNDVTAANLDNGTT-----IPADLVIVGIGTVLNTNYLDGKGVELNGQ 297
M A V+ + K VT + TT I D V + +G + T++L GV+L+ +
Sbjct: 209 MNAQVTEIVGDGKK-VTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDER 267
Query: 298 KAVVVNEYLETNVPGVYAGGDI 319
+VV+ T+VPGVYA GD+
Sbjct: 268 GYIVVDSRQRTSVPGVYAAGDV 289
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 736 NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGER-ITKLFESKGVKFV 794
VV IG G AA + VK+VT++ E + K + E + + + + ++
Sbjct: 157 RVVTIGGGNSGAIAAISMSEYVKNVTII--------EYMPKYMCENAYVQEIKKRNIPYI 208
Query: 795 MKANVSSFEKNEKNDVTAANLDNGTT-----IPADLVIVGIGTVLNTNYLDGKGVELNGQ 849
M A V+ + K VT + TT I D V + +G + T++L GV+L+ +
Sbjct: 209 MNAQVTEIVGDGKK-VTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDER 267
Query: 850 KAVVVNEYLETNVPGVYAGGDI 871
+VV+ T+VPGVYA GD+
Sbjct: 268 GYIVVDSRQRTSVPGVYAAGDV 289
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 1207 NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGER-ITKLFESKGVKFV 1265
VV IG G AA + VK+VT++ E + K + E + + + + ++
Sbjct: 157 RVVTIGGGNSGAIAAISMSEYVKNVTII--------EYMPKYMCENAYVQEIKKRNIPYI 208
Query: 1266 MKANVSSFEKNEKNDVTAANLDNGTT-----IPADLVIVGIGTVLNTNYLDGKGVELNGQ 1320
M A V+ + K VT + TT I D V + +G + T++L GV+L+ +
Sbjct: 209 MNAQVTEIVGDGKK-VTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDER 267
Query: 1321 KAVVVNEYLETNVPGVYAGGDI 1342
+VV+ T+VPGVYA GD+
Sbjct: 268 GYIVVDSRQRTSVPGVYAAGDV 289
>pdb|2BC1|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox
pdb|2BC1|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox
pdb|2BCP|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox With Azide
pdb|2BCP|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox With Azide
Length = 490
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 185 VVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMK 244
V V+G+ +IG+E A K K V ++ +++ + + K E G++
Sbjct: 197 VAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFG 256
Query: 245 ANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNE 304
V N K + + + D+VI+ +G NT +GK ++L A +VN+
Sbjct: 257 ETVKEVAGNGKVEKI---ITDKNEYDVDMVILAVGFRPNTTLGNGK-IDLFRNGAFLVNK 312
Query: 305 YLETNVPGVYAGGDIA 320
ET++PGVYA GD A
Sbjct: 313 RQETSIPGVYAIGDCA 328
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 737 VVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMK 796
V V+G+ +IG+E A K K V ++ +++ + + K E G++
Sbjct: 197 VAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFG 256
Query: 797 ANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNE 856
V N K + + + D+VI+ +G NT +GK ++L A +VN+
Sbjct: 257 ETVKEVAGNGKVEKI---ITDKNEYDVDMVILAVGFRPNTTLGNGK-IDLFRNGAFLVNK 312
Query: 857 YLETNVPGVYAGGDIA 872
ET++PGVYA GD A
Sbjct: 313 RQETSIPGVYAIGDCA 328
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 1208 VVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMK 1267
V V+G+ +IG+E A K K V ++ +++ + + K E G++
Sbjct: 197 VAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFG 256
Query: 1268 ANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNE 1327
V N K + + + D+VI+ +G NT +GK ++L A +VN+
Sbjct: 257 ETVKEVAGNGKVEKI---ITDKNEYDVDMVILAVGFRPNTTLGNGK-IDLFRNGAFLVNK 312
Query: 1328 YLETNVPGVYAGGDIA 1343
ET++PGVYA GD A
Sbjct: 313 RQETSIPGVYAIGDCA 328
>pdb|2BC0|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: Wild-Type Nox
pdb|2BC0|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: Wild-Type Nox
Length = 490
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 185 VVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMK 244
V V+G+ +IG+E A K K V ++ +++ + + K E G++
Sbjct: 197 VAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFG 256
Query: 245 ANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNE 304
V N K + + + D+VI+ +G NT +GK ++L A +VN+
Sbjct: 257 ETVKEVAGNGKVEKI---ITDKNEYDVDMVILAVGFRPNTTLGNGK-IDLFRNGAFLVNK 312
Query: 305 YLETNVPGVYAGGDIA 320
ET++PGVYA GD A
Sbjct: 313 RQETSIPGVYAIGDCA 328
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 737 VVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMK 796
V V+G+ +IG+E A K K V ++ +++ + + K E G++
Sbjct: 197 VAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFG 256
Query: 797 ANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNE 856
V N K + + + D+VI+ +G NT +GK ++L A +VN+
Sbjct: 257 ETVKEVAGNGKVEKI---ITDKNEYDVDMVILAVGFRPNTTLGNGK-IDLFRNGAFLVNK 312
Query: 857 YLETNVPGVYAGGDIA 872
ET++PGVYA GD A
Sbjct: 313 RQETSIPGVYAIGDCA 328
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 1208 VVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMK 1267
V V+G+ +IG+E A K K V ++ +++ + + K E G++
Sbjct: 197 VAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFG 256
Query: 1268 ANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNE 1327
V N K + + + D+VI+ +G NT +GK ++L A +VN+
Sbjct: 257 ETVKEVAGNGKVEKI---ITDKNEYDVDMVILAVGFRPNTTLGNGK-IDLFRNGAFLVNK 312
Query: 1328 YLETNVPGVYAGGDIA 1343
ET++PGVYA GD A
Sbjct: 313 RQETSIPGVYAIGDCA 328
>pdb|2HQM|A Chain A, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
pdb|2HQM|B Chain B, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
Length = 479
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 185 VVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMK 244
VVV+G+ +IG+E A +V RG ++ + + IT + +G+
Sbjct: 188 VVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK-FDECIQNTITDHYVKEGINVHKL 246
Query: 245 ANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYL----DGKGVELNGQKAV 300
+ + EKN + D ++++ +I D V I T+ ++L + G++LN +
Sbjct: 247 SKIVKVEKNVETDKLKIHMNDSKSI--DDVDELIWTIGRKSHLGMGSENVGIKLNSHDQI 304
Query: 301 VVNEYLETNVPGVYAGGDI 319
+ +EY TNVP +Y+ GD+
Sbjct: 305 IADEYQNTNVPNIYSLGDV 323
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 737 VVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMK 796
VVV+G+ +IG+E A +V RG ++ + + IT + +G+
Sbjct: 188 VVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK-FDECIQNTITDHYVKEGINVHKL 246
Query: 797 ANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYL----DGKGVELNGQKAV 852
+ + EKN + D ++++ +I D V I T+ ++L + G++LN +
Sbjct: 247 SKIVKVEKNVETDKLKIHMNDSKSI--DDVDELIWTIGRKSHLGMGSENVGIKLNSHDQI 304
Query: 853 VVNEYLETNVPGVYAGGDI 871
+ +EY TNVP +Y+ GD+
Sbjct: 305 IADEYQNTNVPNIYSLGDV 323
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 1208 VVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMK 1267
VVV+G+ +IG+E A +V RG ++ + + IT + +G+
Sbjct: 188 VVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK-FDECIQNTITDHYVKEGINVHKL 246
Query: 1268 ANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYL----DGKGVELNGQKAV 1323
+ + EKN + D ++++ +I D V I T+ ++L + G++LN +
Sbjct: 247 SKIVKVEKNVETDKLKIHMNDSKSI--DDVDELIWTIGRKSHLGMGSENVGIKLNSHDQI 304
Query: 1324 VVNEYLETNVPGVYAGGDI 1342
+ +EY TNVP +Y+ GD+
Sbjct: 305 IADEYQNTNVPNIYSLGDV 323
>pdb|1FEA|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|C Chain C, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|D Chain D, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEB|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEB|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEC|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
pdb|1FEC|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
Length = 490
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 24/193 (12%)
Query: 137 SIDFTKIYLATGSSPRTIS-QADGV----NKVFYLRTVEDANNIAPHITPESNVVVIGSS 191
++D I LATGS P+ + + D + N+ FYL + AP + +G
Sbjct: 149 TLDTEYILLATGSWPQHLGIEGDDLCITSNEAFYL-------DEAP-----KRALCVGGG 196
Query: 192 FIGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVS 248
+I +E A F A K + V + RG + + E+ +++T+ + G+ N +
Sbjct: 197 YISIEFAGIFNAYKARGGQVDLAYRGDMILR-GFDSELRKQLTEQLRANGINVRTHENPA 255
Query: 249 SFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV--LNTNYLDGKGVELNGQKAVVVNEYL 306
KN + ++G D+V++ IG V T L+ GVE+ A+ V+ Y
Sbjct: 256 KVTKN-ADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYS 314
Query: 307 ETNVPGVYAGGDI 319
+TNV +YA GD+
Sbjct: 315 KTNVDNIYAIGDV 327
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 24/193 (12%)
Query: 689 SIDFTKIYLATGSSPRTIS-QADGV----NKVFYLRTVEDANNIAPHITPESNVVVIGSS 743
++D I LATGS P+ + + D + N+ FYL + AP + +G
Sbjct: 149 TLDTEYILLATGSWPQHLGIEGDDLCITSNEAFYL-------DEAP-----KRALCVGGG 196
Query: 744 FIGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVS 800
+I +E A F A K + V + RG + + E+ +++T+ + G+ N +
Sbjct: 197 YISIEFAGIFNAYKARGGQVDLAYRGDMILR-GFDSELRKQLTEQLRANGINVRTHENPA 255
Query: 801 SFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV--LNTNYLDGKGVELNGQKAVVVNEYL 858
KN + ++G D+V++ IG V T L+ GVE+ A+ V+ Y
Sbjct: 256 KVTKN-ADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYS 314
Query: 859 ETNVPGVYAGGDI 871
+TNV +YA GD+
Sbjct: 315 KTNVDNIYAIGDV 327
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 24/193 (12%)
Query: 1160 SIDFTKIYLATGSSPRTIS-QADGV----NKVFYLRTVEDANNIAPHITPESNVVVIGSS 1214
++D I LATGS P+ + + D + N+ FYL + AP + +G
Sbjct: 149 TLDTEYILLATGSWPQHLGIEGDDLCITSNEAFYL-------DEAP-----KRALCVGGG 196
Query: 1215 FIGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVS 1271
+I +E A F A K + V + RG + + E+ +++T+ + G+ N +
Sbjct: 197 YISIEFAGIFNAYKARGGQVDLAYRGDMILR-GFDSELRKQLTEQLRANGINVRTHENPA 255
Query: 1272 SFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV--LNTNYLDGKGVELNGQKAVVVNEYL 1329
KN + ++G D+V++ IG V T L+ GVE+ A+ V+ Y
Sbjct: 256 KVTKN-ADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYS 314
Query: 1330 ETNVPGVYAGGDI 1342
+TNV +YA GD+
Sbjct: 315 KTNVDNIYAIGDV 327
>pdb|2TPR|A Chain A, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
pdb|2TPR|B Chain B, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
Length = 490
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 24/193 (12%)
Query: 137 SIDFTKIYLATGSSPRTIS-QADGV----NKVFYLRTVEDANNIAPHITPESNVVVIGSS 191
++D I LATGS P+ + + D + N+ FYL + AP + +G
Sbjct: 149 TLDTEYILLATGSWPQHLGIEGDDLCITSNEAFYL-------DEAP-----KRALCVGGG 196
Query: 192 FIGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVS 248
+I +E A F A K + V + RG + + E+ +++T+ + G+ N +
Sbjct: 197 YISIEFAGIFNAYKARGGQVDLAYRGDMILR-GFDSELRKQLTEQLRANGINVRTHENPA 255
Query: 249 SFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV--LNTNYLDGKGVELNGQKAVVVNEYL 306
KN + ++G D+V++ IG V T L+ GVE+ A+ V+ Y
Sbjct: 256 KVTKN-ADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYS 314
Query: 307 ETNVPGVYAGGDI 319
+TNV +YA GD+
Sbjct: 315 KTNVDNIYAIGDV 327
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 24/193 (12%)
Query: 689 SIDFTKIYLATGSSPRTIS-QADGV----NKVFYLRTVEDANNIAPHITPESNVVVIGSS 743
++D I LATGS P+ + + D + N+ FYL + AP + +G
Sbjct: 149 TLDTEYILLATGSWPQHLGIEGDDLCITSNEAFYL-------DEAP-----KRALCVGGG 196
Query: 744 FIGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVS 800
+I +E A F A K + V + RG + + E+ +++T+ + G+ N +
Sbjct: 197 YISIEFAGIFNAYKARGGQVDLAYRGDMILR-GFDSELRKQLTEQLRANGINVRTHENPA 255
Query: 801 SFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV--LNTNYLDGKGVELNGQKAVVVNEYL 858
KN + ++G D+V++ IG V T L+ GVE+ A+ V+ Y
Sbjct: 256 KVTKN-ADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYS 314
Query: 859 ETNVPGVYAGGDI 871
+TNV +YA GD+
Sbjct: 315 KTNVDNIYAIGDV 327
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 24/193 (12%)
Query: 1160 SIDFTKIYLATGSSPRTIS-QADGV----NKVFYLRTVEDANNIAPHITPESNVVVIGSS 1214
++D I LATGS P+ + + D + N+ FYL + AP + +G
Sbjct: 149 TLDTEYILLATGSWPQHLGIEGDDLCITSNEAFYL-------DEAP-----KRALCVGGG 196
Query: 1215 FIGME-AAAFCASKVK--SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVS 1271
+I +E A F A K + V + RG + + E+ +++T+ + G+ N +
Sbjct: 197 YISIEFAGIFNAYKARGGQVDLAYRGDMILR-GFDSELRKQLTEQLRANGINVRTHENPA 255
Query: 1272 SFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV--LNTNYLDGKGVELNGQKAVVVNEYL 1329
KN + ++G D+V++ IG V T L+ GVE+ A+ V+ Y
Sbjct: 256 KVTKN-ADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYS 314
Query: 1330 ETNVPGVYAGGDI 1342
+TNV +YA GD+
Sbjct: 315 KTNVDNIYAIGDV 327
>pdb|4DNA|A Chain A, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
pdb|4DNA|B Chain B, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
Length = 463
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 12/191 (6%)
Query: 132 LQDGTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSS 191
L G ++ +I +A G P S D + T +A ++ P + PES +++ G
Sbjct: 126 LASGKTVTAERIVIAVGGHP---SPHDALPGHELCITSNEAFDL-PAL-PES-ILIAGGG 179
Query: 192 FIGME-AAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSF 250
+I +E A F VK+ T++ RG ++ + E KG++ + + + S
Sbjct: 180 YIAVEFANIFHGLGVKT-TLIYRGK-EILSRFDQDXRRGLHAAXEEKGIRILCEDIIQSV 237
Query: 251 EKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYL--DGKGVELNGQKAVVVNEYLET 308
+ A +G + AD V + +G NTN L + GV N A++V+ + T
Sbjct: 238 SADADGRRVATTXKHGEIV-ADQVXLALGRXPNTNGLGLEAAGVRTNELGAIIVDAFSRT 296
Query: 309 NVPGVYAGGDI 319
+ PG+YA GD+
Sbjct: 297 STPGIYALGDV 307
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 12/191 (6%)
Query: 684 LQDGTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSS 743
L G ++ +I +A G P S D + T +A ++ P + PES +++ G
Sbjct: 126 LASGKTVTAERIVIAVGGHP---SPHDALPGHELCITSNEAFDL-PAL-PES-ILIAGGG 179
Query: 744 FIGME-AAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSF 802
+I +E A F VK+ T++ RG ++ + E KG++ + + + S
Sbjct: 180 YIAVEFANIFHGLGVKT-TLIYRGK-EILSRFDQDXRRGLHAAXEEKGIRILCEDIIQSV 237
Query: 803 EKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYL--DGKGVELNGQKAVVVNEYLET 860
+ A +G + AD V + +G NTN L + GV N A++V+ + T
Sbjct: 238 SADADGRRVATTXKHGEIV-ADQVXLALGRXPNTNGLGLEAAGVRTNELGAIIVDAFSRT 296
Query: 861 NVPGVYAGGDI 871
+ PG+YA GD+
Sbjct: 297 STPGIYALGDV 307
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 12/191 (6%)
Query: 1155 LQDGTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSS 1214
L G ++ +I +A G P S D + T +A ++ P + PES +++ G
Sbjct: 126 LASGKTVTAERIVIAVGGHP---SPHDALPGHELCITSNEAFDL-PAL-PES-ILIAGGG 179
Query: 1215 FIGME-AAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSF 1273
+I +E A F VK+ T++ RG ++ + E KG++ + + + S
Sbjct: 180 YIAVEFANIFHGLGVKT-TLIYRGK-EILSRFDQDXRRGLHAAXEEKGIRILCEDIIQSV 237
Query: 1274 EKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYL--DGKGVELNGQKAVVVNEYLET 1331
+ A +G + AD V + +G NTN L + GV N A++V+ + T
Sbjct: 238 SADADGRRVATTXKHGEIV-ADQVXLALGRXPNTNGLGLEAAGVRTNELGAIIVDAFSRT 296
Query: 1332 NVPGVYAGGDI 1342
+ PG+YA GD+
Sbjct: 297 STPGIYALGDV 307
>pdb|2V6O|A Chain A, Structure Of Schistosoma Mansoni Thioredoxin-Glutathione
Reductase (Smtgr)
Length = 596
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 23/227 (10%)
Query: 107 KDNDIHVIKGK-KIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFY 165
+DN + + K ++IS E+ K Q ++I KI LATG P+ V Y
Sbjct: 217 RDNQVTYLNAKGRLISPHEVQITD-KNQKVSTITGNKIILATGERPKYPEIPGAVE---Y 272
Query: 166 LRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKE 225
T +D ++ P+ ++ +VIG+S++ +E A F AS VTV+ R ++
Sbjct: 273 GITSDDLFSL-PYFPGKT--LVIGASYVALECAGFLASLGGDVTVMVRSI--LLRGFDQQ 327
Query: 226 VGERITKLFESKGVKF--------VMKANVSSFEKNEKN-DVTAANLDNGTTIPADL--V 274
+ E++ E+ GVKF + + V E N+ + + +G + V
Sbjct: 328 MAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETV 387
Query: 275 IVGIGT--VLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 319
I +G L+ + GV+L+ VV + +T V VYA GDI
Sbjct: 388 IFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDI 434
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 23/227 (10%)
Query: 659 KDNDIHVIKGK-KIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFY 717
+DN + + K ++IS E+ K Q ++I KI LATG P+ V Y
Sbjct: 217 RDNQVTYLNAKGRLISPHEVQITD-KNQKVSTITGNKIILATGERPKYPEIPGAVE---Y 272
Query: 718 LRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKE 777
T +D ++ P+ ++ +VIG+S++ +E A F AS VTV+ R ++
Sbjct: 273 GITSDDLFSL-PYFPGKT--LVIGASYVALECAGFLASLGGDVTVMVRSI--LLRGFDQQ 327
Query: 778 VGERITKLFESKGVKF--------VMKANVSSFEKNEKN-DVTAANLDNGTTIPADL--V 826
+ E++ E+ GVKF + + V E N+ + + +G + V
Sbjct: 328 MAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETV 387
Query: 827 IVGIGT--VLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 871
I +G L+ + GV+L+ VV + +T V VYA GDI
Sbjct: 388 IFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDI 434
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 23/227 (10%)
Query: 1130 KDNDIHVIKGK-KIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFY 1188
+DN + + K ++IS E+ K Q ++I KI LATG P+ V Y
Sbjct: 217 RDNQVTYLNAKGRLISPHEVQITD-KNQKVSTITGNKIILATGERPKYPEIPGAVE---Y 272
Query: 1189 LRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKE 1248
T +D ++ P+ ++ +VIG+S++ +E A F AS VTV+ R ++
Sbjct: 273 GITSDDLFSL-PYFPGKT--LVIGASYVALECAGFLASLGGDVTVMVRSI--LLRGFDQQ 327
Query: 1249 VGERITKLFESKGVKF--------VMKANVSSFEKNEKN-DVTAANLDNGTTIPADL--V 1297
+ E++ E+ GVKF + + V E N+ + + +G + V
Sbjct: 328 MAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETV 387
Query: 1298 IVGIGT--VLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 1342
I +G L+ + GV+L+ VV + +T V VYA GDI
Sbjct: 388 IFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDI 434
>pdb|3H4K|A Chain A, Crystal Structure Of The Wild Type Thioredoxin Glutatione
Reductase From Schistosoma Mansoni In Complex With
Auranofin
Length = 598
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 23/227 (10%)
Query: 107 KDNDIHVIKGK-KIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFY 165
+DN + + K ++IS E+ K Q ++I KI LATG P+ V Y
Sbjct: 217 RDNQVTYLNAKGRLISPHEVQITD-KNQKVSTITGNKIILATGERPKYPEIPGAVE---Y 272
Query: 166 LRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKE 225
T +D ++ P+ ++ +VIG+S++ +E A F AS VTV+ R ++
Sbjct: 273 GITSDDLFSL-PYFPGKT--LVIGASYVALECAGFLASLGGDVTVMVRSI--LLRGFDQQ 327
Query: 226 VGERITKLFESKGVKF--------VMKANVSSFEKNEKN-DVTAANLDNGTTIPADL--V 274
+ E++ E+ GVKF + + V E N+ + + +G + V
Sbjct: 328 MAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETV 387
Query: 275 IVGIGT--VLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 319
I +G L+ + GV+L+ VV + +T V VYA GDI
Sbjct: 388 IFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDI 434
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 23/227 (10%)
Query: 659 KDNDIHVIKGK-KIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFY 717
+DN + + K ++IS E+ K Q ++I KI LATG P+ V Y
Sbjct: 217 RDNQVTYLNAKGRLISPHEVQITD-KNQKVSTITGNKIILATGERPKYPEIPGAVE---Y 272
Query: 718 LRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKE 777
T +D ++ P+ ++ +VIG+S++ +E A F AS VTV+ R ++
Sbjct: 273 GITSDDLFSL-PYFPGKT--LVIGASYVALECAGFLASLGGDVTVMVRSI--LLRGFDQQ 327
Query: 778 VGERITKLFESKGVKF--------VMKANVSSFEKNEKN-DVTAANLDNGTTIPADL--V 826
+ E++ E+ GVKF + + V E N+ + + +G + V
Sbjct: 328 MAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETV 387
Query: 827 IVGIGT--VLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 871
I +G L+ + GV+L+ VV + +T V VYA GDI
Sbjct: 388 IFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDI 434
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 23/227 (10%)
Query: 1130 KDNDIHVIKGK-KIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFY 1188
+DN + + K ++IS E+ K Q ++I KI LATG P+ V Y
Sbjct: 217 RDNQVTYLNAKGRLISPHEVQITD-KNQKVSTITGNKIILATGERPKYPEIPGAVE---Y 272
Query: 1189 LRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKE 1248
T +D ++ P+ ++ +VIG+S++ +E A F AS VTV+ R ++
Sbjct: 273 GITSDDLFSL-PYFPGKT--LVIGASYVALECAGFLASLGGDVTVMVRSI--LLRGFDQQ 327
Query: 1249 VGERITKLFESKGVKF--------VMKANVSSFEKNEKN-DVTAANLDNGTTIPADL--V 1297
+ E++ E+ GVKF + + V E N+ + + +G + V
Sbjct: 328 MAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETV 387
Query: 1298 IVGIGT--VLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 1342
I +G L+ + GV+L+ VV + +T V VYA GDI
Sbjct: 388 IFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDI 434
>pdb|1GES|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GES|B Chain B, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 16/225 (7%)
Query: 96 DSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTIS 155
D I E N++ VIKG D++ E +G +I I +ATG P S
Sbjct: 93 DRIHTSYENVLGKNNVDVIKGFARFVDAKTLE-----VNGETITADHILIATGGRP---S 144
Query: 156 QADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA 215
D + V Y ++ A PE V V+G+ +IG+E +
Sbjct: 145 HPD-IPGVEY--GIDSDGFFALPALPE-RVAVVGAGYIGVELGGVINGLGAKTHLFEMFD 200
Query: 216 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 275
P S + E + ++ ++G + A + KN +T L++G + D +I
Sbjct: 201 APLP-SFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTL-ELEDGRSETVDCLI 258
Query: 276 VGIG-TVLNTNY-LDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 318
IG N N L+ GV+ N + +VV++Y TN+ G+YA GD
Sbjct: 259 WAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGD 303
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 16/225 (7%)
Query: 648 DSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTIS 707
D I E N++ VIKG D++ E +G +I I +ATG P S
Sbjct: 93 DRIHTSYENVLGKNNVDVIKGFARFVDAKTLE-----VNGETITADHILIATGGRP---S 144
Query: 708 QADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA 767
D + V Y ++ A PE V V+G+ +IG+E +
Sbjct: 145 HPD-IPGVEY--GIDSDGFFALPALPE-RVAVVGAGYIGVELGGVINGLGAKTHLFEMFD 200
Query: 768 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 827
P S + E + ++ ++G + A + KN +T L++G + D +I
Sbjct: 201 APLP-SFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTL-ELEDGRSETVDCLI 258
Query: 828 VGIG-TVLNTNY-LDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 870
IG N N L+ GV+ N + +VV++Y TN+ G+YA GD
Sbjct: 259 WAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGD 303
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 16/225 (7%)
Query: 1119 DSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTIS 1178
D I E N++ VIKG D++ E +G +I I +ATG P S
Sbjct: 93 DRIHTSYENVLGKNNVDVIKGFARFVDAKTLE-----VNGETITADHILIATGGRP---S 144
Query: 1179 QADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA 1238
D + V Y ++ A PE V V+G+ +IG+E +
Sbjct: 145 HPD-IPGVEY--GIDSDGFFALPALPE-RVAVVGAGYIGVELGGVINGLGAKTHLFEMFD 200
Query: 1239 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 1298
P S + E + ++ ++G + A + KN +T L++G + D +I
Sbjct: 201 APLP-SFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTL-ELEDGRSETVDCLI 258
Query: 1299 VGIG-TVLNTNY-LDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 1341
IG N N L+ GV+ N + +VV++Y TN+ G+YA GD
Sbjct: 259 WAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGD 303
>pdb|2X8C|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8C|B Chain B, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8G|A Chain A, Oxidized Thioredoxin Glutathione Reductase From
Schistosoma Mansoni
pdb|2X8H|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Gsh
pdb|2X99|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Nadph
Length = 598
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 23/227 (10%)
Query: 107 KDNDIHVIKGK-KIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFY 165
+DN + + K ++IS E+ K Q ++I KI LATG P+ V Y
Sbjct: 217 RDNQVTYLNAKGRLISPHEVQITD-KNQKVSTITGNKIILATGERPKYPEIPGAVE---Y 272
Query: 166 LRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKE 225
T +D ++ P+ ++ +VIG+S++ +E A F AS VTV+ R ++
Sbjct: 273 GITSDDLFSL-PYFPGKT--LVIGASYVALECAGFLASLGGDVTVMVRSI--LLRGFDQQ 327
Query: 226 VGERITKLFESKGVKF--------VMKANVSSFEKNEKN-DVTAANLDNGTTIPADL--V 274
+ E++ E+ GVKF + + V E N+ + + +G + V
Sbjct: 328 MAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETV 387
Query: 275 IVGIGT--VLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 319
I +G L+ + GV+L+ VV + +T V VYA GDI
Sbjct: 388 IFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDI 434
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 23/227 (10%)
Query: 659 KDNDIHVIKGK-KIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFY 717
+DN + + K ++IS E+ K Q ++I KI LATG P+ V Y
Sbjct: 217 RDNQVTYLNAKGRLISPHEVQITD-KNQKVSTITGNKIILATGERPKYPEIPGAVE---Y 272
Query: 718 LRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKE 777
T +D ++ P+ ++ +VIG+S++ +E A F AS VTV+ R ++
Sbjct: 273 GITSDDLFSL-PYFPGKT--LVIGASYVALECAGFLASLGGDVTVMVRSI--LLRGFDQQ 327
Query: 778 VGERITKLFESKGVKF--------VMKANVSSFEKNEKN-DVTAANLDNGTTIPADL--V 826
+ E++ E+ GVKF + + V E N+ + + +G + V
Sbjct: 328 MAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETV 387
Query: 827 IVGIGT--VLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 871
I +G L+ + GV+L+ VV + +T V VYA GDI
Sbjct: 388 IFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDI 434
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 23/227 (10%)
Query: 1130 KDNDIHVIKGK-KIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFY 1188
+DN + + K ++IS E+ K Q ++I KI LATG P+ V Y
Sbjct: 217 RDNQVTYLNAKGRLISPHEVQITD-KNQKVSTITGNKIILATGERPKYPEIPGAVE---Y 272
Query: 1189 LRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKE 1248
T +D ++ P+ ++ +VIG+S++ +E A F AS VTV+ R ++
Sbjct: 273 GITSDDLFSL-PYFPGKT--LVIGASYVALECAGFLASLGGDVTVMVRSI--LLRGFDQQ 327
Query: 1249 VGERITKLFESKGVKF--------VMKANVSSFEKNEKN-DVTAANLDNGTTIPADL--V 1297
+ E++ E+ GVKF + + V E N+ + + +G + V
Sbjct: 328 MAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETV 387
Query: 1298 IVGIGT--VLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 1342
I +G L+ + GV+L+ VV + +T V VYA GDI
Sbjct: 388 IFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDI 434
>pdb|1VCK|A Chain A, Crystal Structure Of Ferredoxin Component Of Carbazole 1,9a-
Dioxygenase Of Pseudomonas Resinovorans Strain Ca10
pdb|2DE5|D Chain D, Crystal Structure Of The Electron Transfer Complex Between
Oxygenase And Ferredoxin In Carbazole 1,9a-Dioxygenase
pdb|2DE5|E Chain E, Crystal Structure Of The Electron Transfer Complex Between
Oxygenase And Ferredoxin In Carbazole 1,9a-Dioxygenase
pdb|2DE5|F Chain F, Crystal Structure Of The Electron Transfer Complex Between
Oxygenase And Ferredoxin In Carbazole 1,9a-Dioxygenase
pdb|2DE6|D Chain D, The Reduced Complex Between Oxygenase And Ferredoxin In
Carbazole 1,9a-Dioxygenase
pdb|2DE6|E Chain E, The Reduced Complex Between Oxygenase And Ferredoxin In
Carbazole 1,9a-Dioxygenase
pdb|2DE6|F Chain F, The Reduced Complex Between Oxygenase And Ferredoxin In
Carbazole 1,9a-Dioxygenase
pdb|2DE7|D Chain D, The Substrate-Bound Complex Between Oxygenase And Ferredoxin
In Carbazole 1,9a-Dioxygenase
pdb|2DE7|E Chain E, The Substrate-Bound Complex Between Oxygenase And Ferredoxin
In Carbazole 1,9a-Dioxygenase
pdb|2DE7|F Chain F, The Substrate-Bound Complex Between Oxygenase And Ferredoxin
In Carbazole 1,9a-Dioxygenase
pdb|3VMG|D Chain D, Reduced Carbazole-Bound Complex Between Oxygenase And
Ferredoxin In Carbazole 1,9a-Dioxygenase
pdb|3VMG|E Chain E, Reduced Carbazole-Bound Complex Between Oxygenase And
Ferredoxin In Carbazole 1,9a-Dioxygenase
pdb|3VMG|F Chain F, Reduced Carbazole-Bound Complex Between Oxygenase And
Ferredoxin In Carbazole 1,9a-Dioxygenase
pdb|3VMH|D Chain D, Oxygen-Bound Complex Between Oxygenase And Ferredoxin In
Carbazole 1, 9a-Dioxygenase
pdb|3VMH|E Chain E, Oxygen-Bound Complex Between Oxygenase And Ferredoxin In
Carbazole 1, 9a-Dioxygenase
pdb|3VMH|F Chain F, Oxygen-Bound Complex Between Oxygenase And Ferredoxin In
Carbazole 1, 9a-Dioxygenase
pdb|3VMI|D Chain D, Carbazole- And Oxygen-Bound Complex Between Oxygenase And
Ferredoxin In Carbazole 1,9a-Dioxygenase
pdb|3VMI|E Chain E, Carbazole- And Oxygen-Bound Complex Between Oxygenase And
Ferredoxin In Carbazole 1,9a-Dioxygenase
pdb|3VMI|F Chain F, Carbazole- And Oxygen-Bound Complex Between Oxygenase And
Ferredoxin In Carbazole 1,9a-Dioxygenase
Length = 115
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%)
Query: 964 VGMDPLAAQFAERNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPG 1023
VG PLA YA C+H A L +G+L + CP+HG FN+ TG P
Sbjct: 25 VGAAPLAVYRVGDQFYATEDTCTHGIASLSEGTLDGDVIECPFHGGAFNVCTGMPASSPC 84
Query: 1024 MDSLPCYKVTIQNDDSVVVQARKDE 1048
L ++V ++ + V +K E
Sbjct: 85 TVPLGVFEVEVKEGEVYVAGEKKLE 109
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%)
Query: 506 NIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQN 565
YA C+H A L +G+L + CP+HG FN+ TG P L ++V ++
Sbjct: 38 QFYATEDTCTHGIASLSEGTLDGDVIECPFHGGAFNVCTGMPASSPCTVPLGVFEVEVKE 97
Query: 566 DDSVVVQARKDE 577
+ V +K E
Sbjct: 98 GEVYVAGEKKLE 109
>pdb|3AB1|A Chain A, Crystal Structure Of Ferredoxin Nadp+ Oxidoreductase
pdb|3AB1|B Chain B, Crystal Structure Of Ferredoxin Nadp+ Oxidoreductase
Length = 360
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 137/308 (44%), Gaps = 51/308 (16%)
Query: 46 FIVVGGGPSGA-----------TC--VETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD 92
++GGGP+G +C +E++ Q G G+L + E + YD +
Sbjct: 17 LTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLG--GQLAALYPEKHI-YDVAGFPEVPA 73
Query: 93 IK-ADSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTK--IYLATGS 149
I +S+ + E + D V+ + + ++L++ + + T + + +A G
Sbjct: 74 IDLVESLWAQAERYNPD----VVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGL 129
Query: 150 ---SPRTISQADGVNK-----VFY-LRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAF 200
PR + Q ++ V+Y +++VED VV++G ++
Sbjct: 130 GAFEPRKLPQLGNIDHLTGSSVYYAVKSVEDFKG--------KRVVIVGGGDSALDWTVG 181
Query: 201 CASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDV-T 259
SVT+V RG FQ GK E + + + + ++ V+S E E N V T
Sbjct: 182 LIKNAASVTLVHRGH-EFQ-GHGKTAHE-VERARANGTIDVYLETEVASIE--ESNGVLT 236
Query: 260 AANLDNGT----TIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYA 315
+L + T+ AD +++ IG N L +EL + A+VV+ +++T+V G+YA
Sbjct: 237 RVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELY-ENALVVDSHMKTSVDGLYA 295
Query: 316 GGDIAYAP 323
GDIAY P
Sbjct: 296 AGDIAYYP 303
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 137/308 (44%), Gaps = 51/308 (16%)
Query: 598 FIVVGGGPSGA-----------TC--VETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD 644
++GGGP+G +C +E++ Q G G+L + E + YD +
Sbjct: 17 LTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLG--GQLAALYPEKHI-YDVAGFPEVPA 73
Query: 645 IK-ADSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTK--IYLATGS 701
I +S+ + E + D V+ + + ++L++ + + T + + +A G
Sbjct: 74 IDLVESLWAQAERYNPD----VVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGL 129
Query: 702 ---SPRTISQADGVNK-----VFY-LRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAF 752
PR + Q ++ V+Y +++VED VV++G ++
Sbjct: 130 GAFEPRKLPQLGNIDHLTGSSVYYAVKSVEDFKG--------KRVVIVGGGDSALDWTVG 181
Query: 753 CASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDV-T 811
SVT+V RG FQ GK E + + + + ++ V+S E E N V T
Sbjct: 182 LIKNAASVTLVHRGH-EFQ-GHGKTAHE-VERARANGTIDVYLETEVASIE--ESNGVLT 236
Query: 812 AANLDNGT----TIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYA 867
+L + T+ AD +++ IG N L +EL + A+VV+ +++T+V G+YA
Sbjct: 237 RVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELY-ENALVVDSHMKTSVDGLYA 295
Query: 868 GGDIAYAP 875
GDIAY P
Sbjct: 296 AGDIAYYP 303
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 137/308 (44%), Gaps = 51/308 (16%)
Query: 1069 FIVVGGGPSGA-----------TC--VETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD 1115
++GGGP+G +C +E++ Q G G+L + E + YD +
Sbjct: 17 LTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLG--GQLAALYPEKHI-YDVAGFPEVPA 73
Query: 1116 IK-ADSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTK--IYLATGS 1172
I +S+ + E + D V+ + + ++L++ + + T + + +A G
Sbjct: 74 IDLVESLWAQAERYNPD----VVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGL 129
Query: 1173 ---SPRTISQADGVNK-----VFY-LRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAF 1223
PR + Q ++ V+Y +++VED VV++G ++
Sbjct: 130 GAFEPRKLPQLGNIDHLTGSSVYYAVKSVEDFKG--------KRVVIVGGGDSALDWTVG 181
Query: 1224 CASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDV-T 1282
SVT+V RG FQ GK E + + + + ++ V+S E E N V T
Sbjct: 182 LIKNAASVTLVHRGH-EFQ-GHGKTAHE-VERARANGTIDVYLETEVASIE--ESNGVLT 236
Query: 1283 AANLDNGT----TIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYA 1338
+L + T+ AD +++ IG N L +EL + A+VV+ +++T+V G+YA
Sbjct: 237 RVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELY-ENALVVDSHMKTSVDGLYA 295
Query: 1339 GGDIAYAP 1346
GDIAY P
Sbjct: 296 AGDIAYYP 303
>pdb|1FL2|A Chain A, Catalytic Core Component Of The Alkylhydroperoxide
Reductase Ahpf From E.Coli
Length = 310
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 184 NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVM 243
V VIG G+EAA A V+ VT++ + + ++ KL K V ++
Sbjct: 146 RVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQD------KLRSLKNVDIIL 199
Query: 244 KANVSSFEKN-------EKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNG 296
A + + + E D + ++ N I + V IG + NTN+L+G VE N
Sbjct: 200 NAQTTEVKGDGSKVVGLEYRDRVSGDIHN---IELAGIFVQIGLLPNTNWLEG-AVERNR 255
Query: 297 QKAVVVNEYLETNVPGVYAGGDIAYAP 323
++++ ETNV GV+A GD P
Sbjct: 256 MGEIIIDAKCETNVKGVFAAGDCTTVP 282
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 736 NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVM 795
V VIG G+EAA A V+ VT++ + + ++ KL K V ++
Sbjct: 146 RVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQD------KLRSLKNVDIIL 199
Query: 796 KANVSSFEKN-------EKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNG 848
A + + + E D + ++ N I + V IG + NTN+L+G VE N
Sbjct: 200 NAQTTEVKGDGSKVVGLEYRDRVSGDIHN---IELAGIFVQIGLLPNTNWLEG-AVERNR 255
Query: 849 QKAVVVNEYLETNVPGVYAGGDIAYAP 875
++++ ETNV GV+A GD P
Sbjct: 256 MGEIIIDAKCETNVKGVFAAGDCTTVP 282
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 1207 NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVM 1266
V VIG G+EAA A V+ VT++ + + ++ KL K V ++
Sbjct: 146 RVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQD------KLRSLKNVDIIL 199
Query: 1267 KANVSSFEKN-------EKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNG 1319
A + + + E D + ++ N I + V IG + NTN+L+G VE N
Sbjct: 200 NAQTTEVKGDGSKVVGLEYRDRVSGDIHN---IELAGIFVQIGLLPNTNWLEG-AVERNR 255
Query: 1320 QKAVVVNEYLETNVPGVYAGGDIAYAP 1346
++++ ETNV GV+A GD P
Sbjct: 256 MGEIIIDAKCETNVKGVFAAGDCTTVP 282
>pdb|2GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Glutathione Complex
pdb|3GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Trypanothione Complex
pdb|4GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Mixed
Disulfide Between Trypanothione And The Enzyme
pdb|5GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant,
Glutathionylspermidine Complex
Length = 461
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 94 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 149
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 85 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 141
Query: 150 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 207
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 142 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 195
Query: 208 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 261
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 196 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 254
Query: 262 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 318
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 255 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 314
Query: 319 IA 320
+
Sbjct: 315 VC 316
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 646 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 701
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 85 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 141
Query: 702 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 759
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 142 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 195
Query: 760 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 813
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 196 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 254
Query: 814 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 870
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 255 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 314
Query: 871 IA 872
+
Sbjct: 315 VC 316
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 1117 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 1172
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 85 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 141
Query: 1173 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 1230
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 142 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 195
Query: 1231 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 1284
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 196 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 254
Query: 1285 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 1341
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 255 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 314
Query: 1342 IA 1343
+
Sbjct: 315 VC 316
>pdb|2X50|A Chain A, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
pdb|2X50|B Chain B, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
Length = 510
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 137 SIDFTKIYLATGSSPRTISQADG-----VNKVFYLRTVEDANNIAPHITPESNVVVIGSS 191
++D I +ATGS P + N+ FYL EDA ++ +G
Sbjct: 170 TLDTEYILIATGSWPTRLGVPGDEFCITSNEAFYL---EDA---------PKRMLCVGGG 217
Query: 192 FIGMEAAAF------CASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKA 245
+I +E A C V + RG + + EV + +TK + G++
Sbjct: 218 YIAVEFAGIFNGYKPCGGYVD---LCYRGDLILR-GFDTEVRKSLTKQLGANGIRVRTNL 273
Query: 246 NVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVN 303
N + KNE + ++GT D V++ IG V + LD GV AV V+
Sbjct: 274 NPTKITKNEDGS-NHVHFNDGTEEDYDQVMLAIGRVPRSQALQLDKAGVRTGKNGAVQVD 332
Query: 304 EYLETNVPGVYAGGDI 319
Y +T+V +YA GD+
Sbjct: 333 AYSKTSVDNIYAIGDV 348
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 689 SIDFTKIYLATGSSPRTISQADG-----VNKVFYLRTVEDANNIAPHITPESNVVVIGSS 743
++D I +ATGS P + N+ FYL EDA ++ +G
Sbjct: 170 TLDTEYILIATGSWPTRLGVPGDEFCITSNEAFYL---EDA---------PKRMLCVGGG 217
Query: 744 FIGMEAAAF------CASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKA 797
+I +E A C V + RG + + EV + +TK + G++
Sbjct: 218 YIAVEFAGIFNGYKPCGGYVD---LCYRGDLILR-GFDTEVRKSLTKQLGANGIRVRTNL 273
Query: 798 NVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVN 855
N + KNE + ++GT D V++ IG V + LD GV AV V+
Sbjct: 274 NPTKITKNEDGS-NHVHFNDGTEEDYDQVMLAIGRVPRSQALQLDKAGVRTGKNGAVQVD 332
Query: 856 EYLETNVPGVYAGGDI 871
Y +T+V +YA GD+
Sbjct: 333 AYSKTSVDNIYAIGDV 348
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 1160 SIDFTKIYLATGSSPRTISQADG-----VNKVFYLRTVEDANNIAPHITPESNVVVIGSS 1214
++D I +ATGS P + N+ FYL EDA ++ +G
Sbjct: 170 TLDTEYILIATGSWPTRLGVPGDEFCITSNEAFYL---EDA---------PKRMLCVGGG 217
Query: 1215 FIGMEAAAF------CASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKA 1268
+I +E A C V + RG + + EV + +TK + G++
Sbjct: 218 YIAVEFAGIFNGYKPCGGYVD---LCYRGDLILR-GFDTEVRKSLTKQLGANGIRVRTNL 273
Query: 1269 NVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVN 1326
N + KNE + ++GT D V++ IG V + LD GV AV V+
Sbjct: 274 NPTKITKNEDGS-NHVHFNDGTEEDYDQVMLAIGRVPRSQALQLDKAGVRTGKNGAVQVD 332
Query: 1327 EYLETNVPGVYAGGDI 1342
Y +T+V +YA GD+
Sbjct: 333 AYSKTSVDNIYAIGDV 348
>pdb|2AAQ|A Chain A, Crystal Structure Analysis Of The Human Glutahione
Reductase, Complexed With Gopi
Length = 479
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 94 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 149
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 103 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 159
Query: 150 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 207
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 160 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 213
Query: 208 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 261
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 214 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 272
Query: 262 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 318
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 273 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 332
Query: 319 IA 320
+
Sbjct: 333 VC 334
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 646 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 701
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 103 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 159
Query: 702 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 759
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 160 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 213
Query: 760 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 813
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 214 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 272
Query: 814 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 870
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 273 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 332
Query: 871 IA 872
+
Sbjct: 333 VC 334
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 1117 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 1172
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 103 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 159
Query: 1173 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 1230
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 160 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 213
Query: 1231 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 1284
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 214 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 272
Query: 1285 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 1341
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 273 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 332
Query: 1342 IA 1343
+
Sbjct: 333 VC 334
>pdb|3DJG|X Chain X, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
Length = 477
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 94 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 149
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 101 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 157
Query: 150 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 207
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 158 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 211
Query: 208 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 261
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 212 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 270
Query: 262 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 318
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 271 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 330
Query: 319 IA 320
+
Sbjct: 331 VC 332
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 646 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 701
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 101 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 157
Query: 702 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 759
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 158 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 211
Query: 760 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 813
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 212 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 270
Query: 814 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 870
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 271 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 330
Query: 871 IA 872
+
Sbjct: 331 VC 332
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 1117 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 1172
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 101 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 157
Query: 1173 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 1230
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 158 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 211
Query: 1231 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 1284
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 212 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 270
Query: 1285 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 1341
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 271 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 330
Query: 1342 IA 1343
+
Sbjct: 331 VC 332
>pdb|1BWC|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Ajoene Inhibitor And Subversive Substrate
pdb|2GH5|A Chain A, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|2GH5|B Chain B, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|1GRA|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRB|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRE|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRF|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|3GRS|A Chain A, Refined Structure Of Glutathione Reductase At 1.54
Angstroms Resolution
pdb|4GR1|A Chain A, The Binding Of The Retro-analogue Of Glutathione Disulfide
To Glutathione Reductase
pdb|3DJJ|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK4|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK8|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK9|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|1GRH|A Chain A, Inhibition Of Human Glutathione Reductase By The
Nitrosourea Drugs 1, 3-Bis(2-Chloroethyl)-1-Nitrosourea
And 1-(2-Chloroethyl)-3-(2- Hydroxyethyl)-1-Nitrosourea
pdb|3SQP|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
pdb|3SQP|B Chain B, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
Length = 478
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 94 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 149
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 102 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 158
Query: 150 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 207
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 159 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 212
Query: 208 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 261
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 213 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 271
Query: 262 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 318
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 272 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 331
Query: 319 IA 320
+
Sbjct: 332 VC 333
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 646 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 701
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 102 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 158
Query: 702 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 759
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 159 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 212
Query: 760 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 813
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 213 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 271
Query: 814 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 870
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 272 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 331
Query: 871 IA 872
+
Sbjct: 332 VC 333
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 1117 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 1172
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 102 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 158
Query: 1173 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 1230
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 159 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 212
Query: 1231 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 1284
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 213 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 271
Query: 1285 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 1341
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 272 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 331
Query: 1342 IA 1343
+
Sbjct: 332 VC 333
>pdb|2JK6|A Chain A, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2JK6|B Chain B, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2W0H|A Chain A, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2W0H|B Chain B, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2YAU|A Chain A, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|2YAU|B Chain B, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|4ADW|A Chain A, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
pdb|4ADW|B Chain B, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
Length = 511
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 137 SIDFTKIYLATGSSPRTISQADG-----VNKVFYLRTVEDANNIAPHITPESNVVVIGSS 191
++D I +ATGS P + N+ FYL EDA ++ +G
Sbjct: 170 TLDTEYILIATGSWPTRLGVPGDEFCITSNEAFYL---EDA---------PKRMLCVGGG 217
Query: 192 FIGMEAAAF------CASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKA 245
+I +E A C V + RG + + EV + +TK + G++
Sbjct: 218 YIAVEFAGIFNGYKPCGGYVD---LCYRGDLILR-GFDTEVRKSLTKQLGANGIRVRTNL 273
Query: 246 NVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVN 303
N + KNE + ++GT D V++ IG V + LD GV AV V+
Sbjct: 274 NPTKITKNEDGS-NHVHFNDGTEEDYDQVMLAIGRVPRSQALQLDKAGVRTGKNGAVQVD 332
Query: 304 EYLETNVPGVYAGGDI 319
Y +T+V +YA GD+
Sbjct: 333 AYSKTSVDNIYAIGDV 348
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 689 SIDFTKIYLATGSSPRTISQADG-----VNKVFYLRTVEDANNIAPHITPESNVVVIGSS 743
++D I +ATGS P + N+ FYL EDA ++ +G
Sbjct: 170 TLDTEYILIATGSWPTRLGVPGDEFCITSNEAFYL---EDA---------PKRMLCVGGG 217
Query: 744 FIGMEAAAF------CASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKA 797
+I +E A C V + RG + + EV + +TK + G++
Sbjct: 218 YIAVEFAGIFNGYKPCGGYVD---LCYRGDLILR-GFDTEVRKSLTKQLGANGIRVRTNL 273
Query: 798 NVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVN 855
N + KNE + ++GT D V++ IG V + LD GV AV V+
Sbjct: 274 NPTKITKNEDGS-NHVHFNDGTEEDYDQVMLAIGRVPRSQALQLDKAGVRTGKNGAVQVD 332
Query: 856 EYLETNVPGVYAGGDI 871
Y +T+V +YA GD+
Sbjct: 333 AYSKTSVDNIYAIGDV 348
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 1160 SIDFTKIYLATGSSPRTISQADG-----VNKVFYLRTVEDANNIAPHITPESNVVVIGSS 1214
++D I +ATGS P + N+ FYL EDA ++ +G
Sbjct: 170 TLDTEYILIATGSWPTRLGVPGDEFCITSNEAFYL---EDA---------PKRMLCVGGG 217
Query: 1215 FIGMEAAAF------CASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKA 1268
+I +E A C V + RG + + EV + +TK + G++
Sbjct: 218 YIAVEFAGIFNGYKPCGGYVD---LCYRGDLILR-GFDTEVRKSLTKQLGANGIRVRTNL 273
Query: 1269 NVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVN 1326
N + KNE + ++GT D V++ IG V + LD GV AV V+
Sbjct: 274 NPTKITKNEDGS-NHVHFNDGTEEDYDQVMLAIGRVPRSQALQLDKAGVRTGKNGAVQVD 332
Query: 1327 EYLETNVPGVYAGGDI 1342
Y +T+V +YA GD+
Sbjct: 333 AYSKTSVDNIYAIGDV 348
>pdb|1XAN|A Chain A, Human Glutathione Reductase In Complex With A Xanthene
Inhibitor
Length = 461
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 94 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 149
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 85 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 141
Query: 150 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 207
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 142 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 195
Query: 208 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 261
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 196 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 254
Query: 262 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 318
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 255 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 314
Query: 319 IA 320
+
Sbjct: 315 VC 316
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 646 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 701
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 85 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 141
Query: 702 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 759
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 142 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 195
Query: 760 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 813
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 196 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 254
Query: 814 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 870
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 255 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 314
Query: 871 IA 872
+
Sbjct: 315 VC 316
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 1117 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 1172
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 85 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 141
Query: 1173 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 1230
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 142 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 195
Query: 1231 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 1284
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 196 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 254
Query: 1285 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 1341
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 255 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 314
Query: 1342 IA 1343
+
Sbjct: 315 VC 316
>pdb|1GRG|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
Length = 478
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 94 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 149
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 102 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 158
Query: 150 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 207
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 159 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 212
Query: 208 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 261
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 213 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 271
Query: 262 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 318
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 272 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 331
Query: 319 IA 320
+
Sbjct: 332 VC 333
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 646 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 701
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 102 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 158
Query: 702 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 759
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 159 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 212
Query: 760 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 813
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 213 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 271
Query: 814 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 870
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 272 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 331
Query: 871 IA 872
+
Sbjct: 332 VC 333
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 1117 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 1172
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 102 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 158
Query: 1173 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 1230
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 159 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 212
Query: 1231 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 1284
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 213 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 271
Query: 1285 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 1341
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 272 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 331
Query: 1342 IA 1343
+
Sbjct: 332 VC 333
>pdb|1DNC|A Chain A, Human Glutathione Reductase Modified By
Diglutathione-Dinitroso-Iron
Length = 478
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 94 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 149
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 102 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 158
Query: 150 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 207
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 159 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 212
Query: 208 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 261
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 213 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 271
Query: 262 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 318
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 272 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 331
Query: 319 IA 320
+
Sbjct: 332 VC 333
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 646 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 701
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 102 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 158
Query: 702 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 759
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 159 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 212
Query: 760 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 813
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 213 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 271
Query: 814 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 870
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 272 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 331
Query: 871 IA 872
+
Sbjct: 332 VC 333
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 1117 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 1172
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 102 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 158
Query: 1173 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 1230
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 159 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 212
Query: 1231 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 1284
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 213 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 271
Query: 1285 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 1341
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 272 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 331
Query: 1342 IA 1343
+
Sbjct: 332 VC 333
>pdb|1GRT|A Chain A, Human Glutathione Reductase A34eR37W MUTANT
Length = 478
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 94 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 149
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 102 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 158
Query: 150 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 207
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 159 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 212
Query: 208 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 261
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 213 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 271
Query: 262 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 318
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 272 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 331
Query: 319 IA 320
+
Sbjct: 332 VC 333
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 646 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 701
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 102 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 158
Query: 702 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 759
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 159 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 212
Query: 760 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 813
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 213 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 271
Query: 814 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 870
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 272 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 331
Query: 871 IA 872
+
Sbjct: 332 VC 333
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 1117 KADSILLRTEEFYKDN----DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 1172
K D+ + R Y++N I +I+G + + K G I +ATG
Sbjct: 102 KRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTS---DPKPTIEVSGKKYTAPHILIATGG 158
Query: 1173 SPRTI--SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 1230
P T SQ G + L D + S V++G+ +I +E A ++
Sbjct: 159 MPSTPHESQIPGAS----LGITSDGFFQLEELPGRS--VIVGAGYIAVEMAGILSALGSK 212
Query: 1231 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN----EKNDVTA--A 1284
+++ R + S + T+ E+ GV+ + + V +K E + VTA
Sbjct: 213 TSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG 271
Query: 1285 NLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 1341
L T IP D ++ IG V NT L+ G++ + + ++V+E+ TNV G+YA GD
Sbjct: 272 RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 331
Query: 1342 IA 1343
+
Sbjct: 332 VC 333
>pdb|1K4Q|A Chain A, Human Glutathione Reductase Inactivated By Peroxynitrite
Length = 463
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 186 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKA 245
V++G+ +I +E A ++ +++ R + S + T+ E+ GV+ + +
Sbjct: 176 VIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFS 234
Query: 246 NVSSFEKN----EKNDVTA--ANLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNG 296
V +K E + VTA L T IP D ++ IG V NT L+ G++ +
Sbjct: 235 QVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDD 294
Query: 297 QKAVVVNEYLETNVPGVYAGGDIA 320
+ ++V+E+ TNV G+YA GD+
Sbjct: 295 KGHIIVDEFQNTNVKGIYAVGDVC 318
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 738 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKA 797
V++G+ +I +E A ++ +++ R + S + T+ E+ GV+ + +
Sbjct: 176 VIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFS 234
Query: 798 NVSSFEKN----EKNDVTA--ANLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNG 848
V +K E + VTA L T IP D ++ IG V NT L+ G++ +
Sbjct: 235 QVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDD 294
Query: 849 QKAVVVNEYLETNVPGVYAGGDIA 872
+ ++V+E+ TNV G+YA GD+
Sbjct: 295 KGHIIVDEFQNTNVKGIYAVGDVC 318
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 1209 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKA 1268
V++G+ +I +E A ++ +++ R + S + T+ E+ GV+ + +
Sbjct: 176 VIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLKFS 234
Query: 1269 NVSSFEKN----EKNDVTA--ANLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNG 1319
V +K E + VTA L T IP D ++ IG V NT L+ G++ +
Sbjct: 235 QVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDD 294
Query: 1320 QKAVVVNEYLETNVPGVYAGGDIA 1343
+ ++V+E+ TNV G+YA GD+
Sbjct: 295 KGHIIVDEFQNTNVKGIYAVGDVC 318
>pdb|2I7F|A Chain A, Sphingomonas Yanoikuyae B1 Ferredoxin
pdb|2I7F|B Chain B, Sphingomonas Yanoikuyae B1 Ferredoxin
Length = 108
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%)
Query: 959 LAILTVGMDPLAAQFAERNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDI 1018
+A+ M LA + ++ C+H A L G + CP+HG F+IATG
Sbjct: 19 VAVYQEKMPALAVYNVDGEVFVTDNLCTHGNAMLTDGYQDGTIIECPFHGGSFDIATGAA 78
Query: 1019 EDFPGMDSLPCYKVTIQNDDSVVVQARK 1046
+ FP + Y VTI++ + Q ++
Sbjct: 79 KAFPCQIPIKTYPVTIEDGWVCIDQPKE 106
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%)
Query: 496 PKTLAQSTTSNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDS 555
P + ++ C+H A L G + CP+HG F+IATG + FP
Sbjct: 27 PALAVYNVDGEVFVTDNLCTHGNAMLTDGYQDGTIIECPFHGGSFDIATGAAKAFPCQIP 86
Query: 556 LPCYKVTIQNDDSVVVQARK 575
+ Y VTI++ + Q ++
Sbjct: 87 IKTYPVTIEDGWVCIDQPKE 106
>pdb|1GSN|A Chain A, Human Glutathione Reductase Modified By
Dinitrosoglutathione
Length = 478
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 186 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKA 245
V++G+ +I +E A ++ +++ R + S + T+ E+ GV+ + +
Sbjct: 191 VIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR-SFDSMISTNXTEELENAGVEVLKFS 249
Query: 246 NVSSFEKN----EKNDVTA--ANLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNG 296
V +K E + VTA L T IP D ++ IG V NT L+ G++ +
Sbjct: 250 QVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDXLLWAIGRVPNTKDLSLNKLGIQTDD 309
Query: 297 QKAVVVNEYLETNVPGVYAGGDIA 320
+ ++V+E+ TNV G+YA GD+
Sbjct: 310 KGHIIVDEFQNTNVKGIYAVGDVC 333
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 738 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKA 797
V++G+ +I +E A ++ +++ R + S + T+ E+ GV+ + +
Sbjct: 191 VIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR-SFDSMISTNXTEELENAGVEVLKFS 249
Query: 798 NVSSFEKN----EKNDVTA--ANLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNG 848
V +K E + VTA L T IP D ++ IG V NT L+ G++ +
Sbjct: 250 QVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDXLLWAIGRVPNTKDLSLNKLGIQTDD 309
Query: 849 QKAVVVNEYLETNVPGVYAGGDIA 872
+ ++V+E+ TNV G+YA GD+
Sbjct: 310 KGHIIVDEFQNTNVKGIYAVGDVC 333
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 1209 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKA 1268
V++G+ +I +E A ++ +++ R + S + T+ E+ GV+ + +
Sbjct: 191 VIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR-SFDSMISTNXTEELENAGVEVLKFS 249
Query: 1269 NVSSFEKN----EKNDVTA--ANLDNGTTIP-ADLVIVGIGTVLNTN--YLDGKGVELNG 1319
V +K E + VTA L T IP D ++ IG V NT L+ G++ +
Sbjct: 250 QVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDXLLWAIGRVPNTKDLSLNKLGIQTDD 309
Query: 1320 QKAVVVNEYLETNVPGVYAGGDIA 1343
+ ++V+E+ TNV G+YA GD+
Sbjct: 310 KGHIIVDEFQNTNVKGIYAVGDVC 333
>pdb|2NVK|X Chain X, Crystal Structure Of Thioredoxin Reductase From Drosophila
Melanogaster
Length = 488
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 19/253 (7%)
Query: 76 DENFLP-YDRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQD 134
D+ P + ++ S Q IK+ + + R + +D + I G DS K+K +
Sbjct: 89 DDKIKPDWHKLVQSVQNHIKSVNWVTRVD--LRDKKVEYINGLGSFVDSHTLLAKLKSGE 146
Query: 135 GTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIG 194
T I +A G PR D V Y T +D ++ +V+G+ +IG
Sbjct: 147 RT-ITAQTFVIAVGGRPR---YPDIPGAVEYGITSDDLFSLDRE---PGKTLVVGAGYIG 199
Query: 195 MEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNE 254
+E A F TV+ R V +++ E + E +G+ F+ K S EK +
Sbjct: 200 LECAGFLKGLGYEPTVMVRSIV--LRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQD 257
Query: 255 KND--VTAANLDNG--TTIPADLVIVGIGT--VLNTNYLDGKGVELNGQKAVVVNEYLET 308
V N++ G + D V+ IG +++ L GV + K + V+ T
Sbjct: 258 DGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDK-IPVDSQEAT 316
Query: 309 NVPGVYAGGDIAY 321
NV +YA GDI Y
Sbjct: 317 NVANIYAVGDIIY 329
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 19/253 (7%)
Query: 628 DENFLP-YDRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQD 686
D+ P + ++ S Q IK+ + + R + +D + I G DS K+K +
Sbjct: 89 DDKIKPDWHKLVQSVQNHIKSVNWVTRVD--LRDKKVEYINGLGSFVDSHTLLAKLKSGE 146
Query: 687 GTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIG 746
T I +A G PR D V Y T +D ++ +V+G+ +IG
Sbjct: 147 RT-ITAQTFVIAVGGRPR---YPDIPGAVEYGITSDDLFSLDRE---PGKTLVVGAGYIG 199
Query: 747 MEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNE 806
+E A F TV+ R V +++ E + E +G+ F+ K S EK +
Sbjct: 200 LECAGFLKGLGYEPTVMVRSIV--LRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQD 257
Query: 807 KND--VTAANLDNG--TTIPADLVIVGIGT--VLNTNYLDGKGVELNGQKAVVVNEYLET 860
V N++ G + D V+ IG +++ L GV + K + V+ T
Sbjct: 258 DGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDK-IPVDSQEAT 316
Query: 861 NVPGVYAGGDIAY 873
NV +YA GDI Y
Sbjct: 317 NVANIYAVGDIIY 329
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 19/253 (7%)
Query: 1099 DENFLP-YDRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQD 1157
D+ P + ++ S Q IK+ + + R + +D + I G DS K+K +
Sbjct: 89 DDKIKPDWHKLVQSVQNHIKSVNWVTRVD--LRDKKVEYINGLGSFVDSHTLLAKLKSGE 146
Query: 1158 GTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIG 1217
T I +A G PR D V Y T +D ++ +V+G+ +IG
Sbjct: 147 RT-ITAQTFVIAVGGRPR---YPDIPGAVEYGITSDDLFSLDRE---PGKTLVVGAGYIG 199
Query: 1218 MEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNE 1277
+E A F TV+ R V +++ E + E +G+ F+ K S EK +
Sbjct: 200 LECAGFLKGLGYEPTVMVRSIV--LRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQD 257
Query: 1278 KND--VTAANLDNG--TTIPADLVIVGIGT--VLNTNYLDGKGVELNGQKAVVVNEYLET 1331
V N++ G + D V+ IG +++ L GV + K + V+ T
Sbjct: 258 DGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDK-IPVDSQEAT 316
Query: 1332 NVPGVYAGGDIAY 1344
NV +YA GDI Y
Sbjct: 317 NVANIYAVGDIIY 329
>pdb|3DH9|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
pdb|3DH9|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
Length = 482
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 105/254 (41%), Gaps = 19/254 (7%)
Query: 76 DENFLP-YDRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQD 134
D+ P + ++ S Q IK+ + + R + +D + I G DS K+K +
Sbjct: 85 DDKIKPDWHKLVQSVQNHIKSVNWVTRVD--LRDKKVEYINGLGSFVDSHTLLAKLKSGE 142
Query: 135 GTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIG 194
T I +A G PR D V Y T +D ++ +V+G+ +IG
Sbjct: 143 RT-ITAQTFVIAVGGRPR---YPDIPGAVEYGITSDDLFSLDRE---PGKTLVVGAGYIG 195
Query: 195 MEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNE 254
+E A F TV+ R V +++ E + E +G+ F+ K S EK +
Sbjct: 196 LECAGFLKGLGYEPTVMVRSIV--LRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQD 253
Query: 255 KND--VTAANLDNGTTIP--ADLVIVGIGT--VLNTNYLDGKGVELNGQKAVVVNEYLET 308
V N++ G D V+ IG +++ L GV + K + V+ T
Sbjct: 254 DGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDK-IPVDSQEAT 312
Query: 309 NVPGVYAGGDIAYA 322
NV +YA GDI Y
Sbjct: 313 NVANIYAVGDIIYG 326
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 105/254 (41%), Gaps = 19/254 (7%)
Query: 628 DENFLP-YDRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQD 686
D+ P + ++ S Q IK+ + + R + +D + I G DS K+K +
Sbjct: 85 DDKIKPDWHKLVQSVQNHIKSVNWVTRVD--LRDKKVEYINGLGSFVDSHTLLAKLKSGE 142
Query: 687 GTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIG 746
T I +A G PR D V Y T +D ++ +V+G+ +IG
Sbjct: 143 RT-ITAQTFVIAVGGRPR---YPDIPGAVEYGITSDDLFSLDRE---PGKTLVVGAGYIG 195
Query: 747 MEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNE 806
+E A F TV+ R V +++ E + E +G+ F+ K S EK +
Sbjct: 196 LECAGFLKGLGYEPTVMVRSIV--LRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQD 253
Query: 807 KND--VTAANLDNGTTIP--ADLVIVGIGT--VLNTNYLDGKGVELNGQKAVVVNEYLET 860
V N++ G D V+ IG +++ L GV + K + V+ T
Sbjct: 254 DGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDK-IPVDSQEAT 312
Query: 861 NVPGVYAGGDIAYA 874
NV +YA GDI Y
Sbjct: 313 NVANIYAVGDIIYG 326
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 105/254 (41%), Gaps = 19/254 (7%)
Query: 1099 DENFLP-YDRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQD 1157
D+ P + ++ S Q IK+ + + R + +D + I G DS K+K +
Sbjct: 85 DDKIKPDWHKLVQSVQNHIKSVNWVTRVD--LRDKKVEYINGLGSFVDSHTLLAKLKSGE 142
Query: 1158 GTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIG 1217
T I +A G PR D V Y T +D ++ +V+G+ +IG
Sbjct: 143 RT-ITAQTFVIAVGGRPR---YPDIPGAVEYGITSDDLFSLDRE---PGKTLVVGAGYIG 195
Query: 1218 MEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNE 1277
+E A F TV+ R V +++ E + E +G+ F+ K S EK +
Sbjct: 196 LECAGFLKGLGYEPTVMVRSIV--LRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQD 253
Query: 1278 KND--VTAANLDNGTTIP--ADLVIVGIGT--VLNTNYLDGKGVELNGQKAVVVNEYLET 1331
V N++ G D V+ IG +++ L GV + K + V+ T
Sbjct: 254 DGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDK-IPVDSQEAT 312
Query: 1332 NVPGVYAGGDIAYA 1345
NV +YA GDI Y
Sbjct: 313 NVANIYAVGDIIYG 326
>pdb|3II4|A Chain A, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
pdb|3II4|B Chain B, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
Length = 466
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 27/261 (10%)
Query: 66 GFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKIISDSEL 125
G +G++ F + + YDR + + + L+ K N I I G +D+
Sbjct: 72 GISGEVTF---DYGIAYDRSRKVAEGRVAGVHFLM------KKNKITEIHGYGTFADA-- 120
Query: 126 NEKKIKLQDG--TSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPES 183
N + L DG S+ F +ATGSS R + G + + T E+ I P+S
Sbjct: 121 NTLLVDLNDGGTESVTFDNAIIATGSSTRLVP---GTSLSANVVTYEE--QILSRELPKS 175
Query: 184 NVVVIGSSFIGMEAAAFCASKVKSVTVVG--RGAVPFQESLGKEVGERITKLFESKGVKF 241
++ + ME + VT+V A+P +++ +V + I K F+ GV
Sbjct: 176 IIIAGAGAIG-MEFGYVLKNYGVDVTIVEFLPRALPNEDA---DVSKEIEKQFKKLGVTI 231
Query: 242 VMKANVSSF-EKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQK 298
+ V S + + VT + A+ V+ IG N LD GV L +K
Sbjct: 232 LTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRK 291
Query: 299 AVVVNEYLETNVPGVYAGGDI 319
A+ V++Y+ TNV +YA GD+
Sbjct: 292 AIGVDDYMRTNVGHIYAIGDV 312
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 27/261 (10%)
Query: 618 GFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKIISDSEL 677
G +G++ F + + YDR + + + L+ K N I I G +D+
Sbjct: 72 GISGEVTF---DYGIAYDRSRKVAEGRVAGVHFLM------KKNKITEIHGYGTFADA-- 120
Query: 678 NEKKIKLQDG--TSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPES 735
N + L DG S+ F +ATGSS R + G + + T E+ I P+S
Sbjct: 121 NTLLVDLNDGGTESVTFDNAIIATGSSTRLVP---GTSLSANVVTYEE--QILSRELPKS 175
Query: 736 NVVVIGSSFIGMEAAAFCASKVKSVTVVG--RGAVPFQESLGKEVGERITKLFESKGVKF 793
++ + ME + VT+V A+P +++ +V + I K F+ GV
Sbjct: 176 IIIAGAGAIG-MEFGYVLKNYGVDVTIVEFLPRALPNEDA---DVSKEIEKQFKKLGVTI 231
Query: 794 VMKANVSSF-EKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQK 850
+ V S + + VT + A+ V+ IG N LD GV L +K
Sbjct: 232 LTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRK 291
Query: 851 AVVVNEYLETNVPGVYAGGDI 871
A+ V++Y+ TNV +YA GD+
Sbjct: 292 AIGVDDYMRTNVGHIYAIGDV 312
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 27/261 (10%)
Query: 1089 GFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKIISDSEL 1148
G +G++ F + + YDR + + + L+ K N I I G +D+
Sbjct: 72 GISGEVTF---DYGIAYDRSRKVAEGRVAGVHFLM------KKNKITEIHGYGTFADA-- 120
Query: 1149 NEKKIKLQDG--TSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPES 1206
N + L DG S+ F +ATGSS R + G + + T E+ I P+S
Sbjct: 121 NTLLVDLNDGGTESVTFDNAIIATGSSTRLVP---GTSLSANVVTYEE--QILSRELPKS 175
Query: 1207 NVVVIGSSFIGMEAAAFCASKVKSVTVVG--RGAVPFQESLGKEVGERITKLFESKGVKF 1264
++ + ME + VT+V A+P +++ +V + I K F+ GV
Sbjct: 176 IIIAGAGAIG-MEFGYVLKNYGVDVTIVEFLPRALPNEDA---DVSKEIEKQFKKLGVTI 231
Query: 1265 VMKANVSSF-EKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQK 1321
+ V S + + VT + A+ V+ IG N LD GV L +K
Sbjct: 232 LTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRK 291
Query: 1322 AVVVNEYLETNVPGVYAGGDI 1342
A+ V++Y+ TNV +YA GD+
Sbjct: 292 AIGVDDYMRTNVGHIYAIGDV 312
>pdb|3DGH|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
pdb|3DGH|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
Length = 483
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 106/254 (41%), Gaps = 19/254 (7%)
Query: 76 DENFLP-YDRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQD 134
D+ P + ++ S Q IK+ + + R + +D + I G DS K+K +
Sbjct: 89 DDKIKPDWHKLVQSVQNHIKSVNWVTRVD--LRDKKVEYINGLGSFVDSHTLLAKLKSGE 146
Query: 135 GTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIG 194
T I +A G PR D V Y T +D ++ +V+G+ +IG
Sbjct: 147 RT-ITAQTFVIAVGGRPR---YPDIPGAVEYGITSDDLFSLDRE---PGKTLVVGAGYIG 199
Query: 195 MEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNE 254
+E A F TV+ R V +++ E + E +G+ F+ K S EK +
Sbjct: 200 LECAGFLKGLGYEPTVMVRSIV--LRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQD 257
Query: 255 KND--VTAANLDNG--TTIPADLVIVGIGT--VLNTNYLDGKGVELNGQKAVVVNEYLET 308
V N++ G + D V+ IG +++ L GV + K + V+ T
Sbjct: 258 DGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDK-IPVDSQEAT 316
Query: 309 NVPGVYAGGDIAYA 322
NV +YA GDI Y
Sbjct: 317 NVANIYAVGDIIYG 330
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 106/254 (41%), Gaps = 19/254 (7%)
Query: 628 DENFLP-YDRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQD 686
D+ P + ++ S Q IK+ + + R + +D + I G DS K+K +
Sbjct: 89 DDKIKPDWHKLVQSVQNHIKSVNWVTRVD--LRDKKVEYINGLGSFVDSHTLLAKLKSGE 146
Query: 687 GTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIG 746
T I +A G PR D V Y T +D ++ +V+G+ +IG
Sbjct: 147 RT-ITAQTFVIAVGGRPR---YPDIPGAVEYGITSDDLFSLDRE---PGKTLVVGAGYIG 199
Query: 747 MEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNE 806
+E A F TV+ R V +++ E + E +G+ F+ K S EK +
Sbjct: 200 LECAGFLKGLGYEPTVMVRSIV--LRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQD 257
Query: 807 KND--VTAANLDNG--TTIPADLVIVGIGT--VLNTNYLDGKGVELNGQKAVVVNEYLET 860
V N++ G + D V+ IG +++ L GV + K + V+ T
Sbjct: 258 DGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDK-IPVDSQEAT 316
Query: 861 NVPGVYAGGDIAYA 874
NV +YA GDI Y
Sbjct: 317 NVANIYAVGDIIYG 330
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 106/254 (41%), Gaps = 19/254 (7%)
Query: 1099 DENFLP-YDRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQD 1157
D+ P + ++ S Q IK+ + + R + +D + I G DS K+K +
Sbjct: 89 DDKIKPDWHKLVQSVQNHIKSVNWVTRVD--LRDKKVEYINGLGSFVDSHTLLAKLKSGE 146
Query: 1158 GTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIG 1217
T I +A G PR D V Y T +D ++ +V+G+ +IG
Sbjct: 147 RT-ITAQTFVIAVGGRPR---YPDIPGAVEYGITSDDLFSLDRE---PGKTLVVGAGYIG 199
Query: 1218 MEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNE 1277
+E A F TV+ R V +++ E + E +G+ F+ K S EK +
Sbjct: 200 LECAGFLKGLGYEPTVMVRSIV--LRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQD 257
Query: 1278 KND--VTAANLDNG--TTIPADLVIVGIGT--VLNTNYLDGKGVELNGQKAVVVNEYLET 1331
V N++ G + D V+ IG +++ L GV + K + V+ T
Sbjct: 258 DGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDK-IPVDSQEAT 316
Query: 1332 NVPGVYAGGDIAYA 1345
NV +YA GDI Y
Sbjct: 317 NVANIYAVGDIIYG 330
>pdb|2ZZ0|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZB|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZC|A Chain A, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|B Chain B, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|C Chain C, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|D Chain D, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
Length = 513
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 186 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAV--PFQESLGKEVGERITKLFESKGVKFVM 243
+V+G+S++ +E A F A VTV+ R + F + + ++GE + E G+KF+
Sbjct: 208 LVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM----EEHGIKFIR 263
Query: 244 KANVSSFEKNE-----KNDVTAANLDNGTTIPADL--VIVGIGTVLNTNY--LDGKGVEL 294
+ E+ E + V A + ++ I + V++ IG T L+ GV++
Sbjct: 264 QFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKI 323
Query: 295 NGQKA-VVVNEYLETNVPGVYAGGDI 319
N + + V + +TNVP +YA GDI
Sbjct: 324 NEKTGKIPVTDEEQTNVPYIYAIGDI 349
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 738 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAV--PFQESLGKEVGERITKLFESKGVKFVM 795
+V+G+S++ +E A F A VTV+ R + F + + ++GE + E G+KF+
Sbjct: 208 LVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM----EEHGIKFIR 263
Query: 796 KANVSSFEKNE-----KNDVTAANLDNGTTIPADL--VIVGIGTVLNTNY--LDGKGVEL 846
+ E+ E + V A + ++ I + V++ IG T L+ GV++
Sbjct: 264 QFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKI 323
Query: 847 NGQKA-VVVNEYLETNVPGVYAGGDI 871
N + + V + +TNVP +YA GDI
Sbjct: 324 NEKTGKIPVTDEEQTNVPYIYAIGDI 349
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 1209 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAV--PFQESLGKEVGERITKLFESKGVKFVM 1266
+V+G+S++ +E A F A VTV+ R + F + + ++GE + E G+KF+
Sbjct: 208 LVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM----EEHGIKFIR 263
Query: 1267 KANVSSFEKNE-----KNDVTAANLDNGTTIPADL--VIVGIGTVLNTNY--LDGKGVEL 1317
+ E+ E + V A + ++ I + V++ IG T L+ GV++
Sbjct: 264 QFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKI 323
Query: 1318 NGQKA-VVVNEYLETNVPGVYAGGDI 1342
N + + V + +TNVP +YA GDI
Sbjct: 324 NEKTGKIPVTDEEQTNVPYIYAIGDI 349
>pdb|1LPF|A Chain A, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
pdb|1LPF|B Chain B, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
Length = 477
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 9/185 (4%)
Query: 138 IDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEA 197
++ + +A+GS P I A + + V+ + P+ + VIG+ IG+E
Sbjct: 141 LEAENVIIASGSRPVEIPPAPLSDDII----VDSTGALEFQAVPK-KLGVIGAGVIGLEL 195
Query: 198 AAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKN- 256
+ A VTV+ F + +++ + K+ +G+ + A V++ E +K
Sbjct: 196 GSVWARLGAEVTVL-EALDKFLPAADEQIAKEALKVLTKQGLNIRLGARVTASEVKKKQV 254
Query: 257 --DVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVY 314
T AN + T +V VG V GV L+ + + V+++ +T+VPGV+
Sbjct: 255 TVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDHCKTSVPGVF 314
Query: 315 AGGDI 319
A GD+
Sbjct: 315 AIGDV 319
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 9/185 (4%)
Query: 690 IDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEA 749
++ + +A+GS P I A + + V+ + P+ + VIG+ IG+E
Sbjct: 141 LEAENVIIASGSRPVEIPPAPLSDDII----VDSTGALEFQAVPK-KLGVIGAGVIGLEL 195
Query: 750 AAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKN- 808
+ A VTV+ F + +++ + K+ +G+ + A V++ E +K
Sbjct: 196 GSVWARLGAEVTVL-EALDKFLPAADEQIAKEALKVLTKQGLNIRLGARVTASEVKKKQV 254
Query: 809 --DVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVY 866
T AN + T +V VG V GV L+ + + V+++ +T+VPGV+
Sbjct: 255 TVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDHCKTSVPGVF 314
Query: 867 AGGDI 871
A GD+
Sbjct: 315 AIGDV 319
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 9/185 (4%)
Query: 1161 IDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEA 1220
++ + +A+GS P I A + + V+ + P+ + VIG+ IG+E
Sbjct: 141 LEAENVIIASGSRPVEIPPAPLSDDII----VDSTGALEFQAVPK-KLGVIGAGVIGLEL 195
Query: 1221 AAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKN- 1279
+ A VTV+ F + +++ + K+ +G+ + A V++ E +K
Sbjct: 196 GSVWARLGAEVTVL-EALDKFLPAADEQIAKEALKVLTKQGLNIRLGARVTASEVKKKQV 254
Query: 1280 --DVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVY 1337
T AN + T +V VG V GV L+ + + V+++ +T+VPGV+
Sbjct: 255 TVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDHCKTSVPGVF 314
Query: 1338 AGGDI 1342
A GD+
Sbjct: 315 AIGDV 319
>pdb|2J3N|A Chain A, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|B Chain B, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|C Chain C, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|D Chain D, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|E Chain E, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|F Chain F, X-Ray Structure Of Human Thioredoxin Reductase 1
Length = 519
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 186 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAV--PFQESLGKEVGERITKLFESKGVKFVM 243
+V+G+S++ +E A F A VTV+ R + F + + ++GE + E G+KF+
Sbjct: 214 LVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM----EEHGIKFIR 269
Query: 244 KANVSSFEKNE-----KNDVTAANLDNGTTIPADL--VIVGIGTVLNTNY--LDGKGVEL 294
+ E+ E + V A + ++ I + V++ IG T L+ GV++
Sbjct: 270 QFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKI 329
Query: 295 NGQKA-VVVNEYLETNVPGVYAGGDI 319
N + + V + +TNVP +YA GDI
Sbjct: 330 NEKTGKIPVTDEEQTNVPYIYAIGDI 355
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 738 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAV--PFQESLGKEVGERITKLFESKGVKFVM 795
+V+G+S++ +E A F A VTV+ R + F + + ++GE + E G+KF+
Sbjct: 214 LVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM----EEHGIKFIR 269
Query: 796 KANVSSFEKNE-----KNDVTAANLDNGTTIPADL--VIVGIGTVLNTNY--LDGKGVEL 846
+ E+ E + V A + ++ I + V++ IG T L+ GV++
Sbjct: 270 QFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKI 329
Query: 847 NGQKA-VVVNEYLETNVPGVYAGGDI 871
N + + V + +TNVP +YA GDI
Sbjct: 330 NEKTGKIPVTDEEQTNVPYIYAIGDI 355
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 1209 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAV--PFQESLGKEVGERITKLFESKGVKFVM 1266
+V+G+S++ +E A F A VTV+ R + F + + ++GE + E G+KF+
Sbjct: 214 LVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM----EEHGIKFIR 269
Query: 1267 KANVSSFEKNE-----KNDVTAANLDNGTTIPADL--VIVGIGTVLNTNY--LDGKGVEL 1317
+ E+ E + V A + ++ I + V++ IG T L+ GV++
Sbjct: 270 QFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKI 329
Query: 1318 NGQKA-VVVNEYLETNVPGVYAGGDI 1342
N + + V + +TNVP +YA GDI
Sbjct: 330 NEKTGKIPVTDEEQTNVPYIYAIGDI 355
>pdb|2CFY|A Chain A, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|B Chain B, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|C Chain C, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|D Chain D, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|E Chain E, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|F Chain F, Crystal Structure Of Human Thioredoxin Reductase 1
Length = 521
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 186 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAV--PFQESLGKEVGERITKLFESKGVKFVM 243
+V+G+S++ +E A F A VTV+ R + F + + ++GE + E G+KF+
Sbjct: 216 LVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM----EEHGIKFIR 271
Query: 244 KANVSSFEKNE-----KNDVTAANLDNGTTIPADL--VIVGIGTVLNTNY--LDGKGVEL 294
+ E+ E + V A + ++ I + V++ IG T L+ GV++
Sbjct: 272 QFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKI 331
Query: 295 NGQKA-VVVNEYLETNVPGVYAGGDI 319
N + + V + +TNVP +YA GDI
Sbjct: 332 NEKTGKIPVTDEEQTNVPYIYAIGDI 357
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 738 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAV--PFQESLGKEVGERITKLFESKGVKFVM 795
+V+G+S++ +E A F A VTV+ R + F + + ++GE + E G+KF+
Sbjct: 216 LVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM----EEHGIKFIR 271
Query: 796 KANVSSFEKNE-----KNDVTAANLDNGTTIPADL--VIVGIGTVLNTNY--LDGKGVEL 846
+ E+ E + V A + ++ I + V++ IG T L+ GV++
Sbjct: 272 QFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKI 331
Query: 847 NGQKA-VVVNEYLETNVPGVYAGGDI 871
N + + V + +TNVP +YA GDI
Sbjct: 332 NEKTGKIPVTDEEQTNVPYIYAIGDI 357
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 1209 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAV--PFQESLGKEVGERITKLFESKGVKFVM 1266
+V+G+S++ +E A F A VTV+ R + F + + ++GE + E G+KF+
Sbjct: 216 LVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM----EEHGIKFIR 271
Query: 1267 KANVSSFEKNE-----KNDVTAANLDNGTTIPADL--VIVGIGTVLNTNY--LDGKGVEL 1317
+ E+ E + V A + ++ I + V++ IG T L+ GV++
Sbjct: 272 QFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKI 331
Query: 1318 NGQKA-VVVNEYLETNVPGVYAGGDI 1342
N + + V + +TNVP +YA GDI
Sbjct: 332 NEKTGKIPVTDEEQTNVPYIYAIGDI 357
>pdb|3QFA|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 519
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 186 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAV--PFQESLGKEVGERITKLFESKGVKFVM 243
+V+G+S++ +E A F A VTV+ R + F + + ++GE + E G+KF+
Sbjct: 214 LVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM----EEHGIKFIR 269
Query: 244 KANVSSFEKNE-----KNDVTAANLDNGTTIPADL--VIVGIGTVLNTNY--LDGKGVEL 294
+ E+ E + V A + ++ I + V++ IG T L+ GV++
Sbjct: 270 QFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKI 329
Query: 295 NGQKA-VVVNEYLETNVPGVYAGGDI 319
N + + V + +TNVP +YA GDI
Sbjct: 330 NEKTGKIPVTDEEQTNVPYIYAIGDI 355
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 738 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAV--PFQESLGKEVGERITKLFESKGVKFVM 795
+V+G+S++ +E A F A VTV+ R + F + + ++GE + E G+KF+
Sbjct: 214 LVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM----EEHGIKFIR 269
Query: 796 KANVSSFEKNE-----KNDVTAANLDNGTTIPADL--VIVGIGTVLNTNY--LDGKGVEL 846
+ E+ E + V A + ++ I + V++ IG T L+ GV++
Sbjct: 270 QFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKI 329
Query: 847 NGQKA-VVVNEYLETNVPGVYAGGDI 871
N + + V + +TNVP +YA GDI
Sbjct: 330 NEKTGKIPVTDEEQTNVPYIYAIGDI 355
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 1209 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAV--PFQESLGKEVGERITKLFESKGVKFVM 1266
+V+G+S++ +E A F A VTV+ R + F + + ++GE + E G+KF+
Sbjct: 214 LVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM----EEHGIKFIR 269
Query: 1267 KANVSSFEKNE-----KNDVTAANLDNGTTIPADL--VIVGIGTVLNTNY--LDGKGVEL 1317
+ E+ E + V A + ++ I + V++ IG T L+ GV++
Sbjct: 270 QFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKI 329
Query: 1318 NGQKA-VVVNEYLETNVPGVYAGGDI 1342
N + + V + +TNVP +YA GDI
Sbjct: 330 NEKTGKIPVTDEEQTNVPYIYAIGDI 355
>pdb|2Q7V|A Chain A, Crystal Structure Of Deinococcus Radiodurans Thioredoxin
Reductase
pdb|2Q7V|B Chain B, Crystal Structure Of Deinococcus Radiodurans Thioredoxin
Reductase
Length = 325
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 121/301 (40%), Gaps = 53/301 (17%)
Query: 47 IVVGGGPSGATCVETLRQNGFTGK--LYFITDENFLPYDRVKLSKQLD--------IKAD 96
+++GGGP+G T +TG+ L + E +P ++ S++++ I
Sbjct: 12 VIIGGGPAGLTAAI------YTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGM 65
Query: 97 SILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDF-------------TKI 143
+ R + + +K + E++E + D TS + +
Sbjct: 66 ELAQRMHQ----------QAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAV 115
Query: 144 YLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCAS 203
LATG+ PR + N F+ + V VVVIG +E F
Sbjct: 116 ILATGADPRKLGIPGEDN--FWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTK 173
Query: 204 KVKSVTVVGRGAVPFQESL-GKEVGERITKLFESKGVKFVMKANVSSFEKNEK-NDVTAA 261
VTV+ R +++L +V + + F + +KF+ V + + + V
Sbjct: 174 FADEVTVIHR-----RDTLRANKVAQ--ARAFANPKMKFIWDTAVEEIQGADSVSGVKLR 226
Query: 262 NLDNG--TTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 319
NL G + + D V + IG V NT ++ V L V V + + TN+P ++A GD+
Sbjct: 227 NLKTGEVSELATDGVFIFIGHVPNTAFVKDT-VSLRDDGYVDVRDEIYTNIPMLFAAGDV 285
Query: 320 A 320
+
Sbjct: 286 S 286
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 121/301 (40%), Gaps = 53/301 (17%)
Query: 599 IVVGGGPSGATCVETLRQNGFTGK--LYFITDENFLPYDRVKLSKQLD--------IKAD 648
+++GGGP+G T +TG+ L + E +P ++ S++++ I
Sbjct: 12 VIIGGGPAGLTAAI------YTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGM 65
Query: 649 SILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDF-------------TKI 695
+ R + + +K + E++E + D TS + +
Sbjct: 66 ELAQRMHQ----------QAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAV 115
Query: 696 YLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCAS 755
LATG+ PR + N F+ + V VVVIG +E F
Sbjct: 116 ILATGADPRKLGIPGEDN--FWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTK 173
Query: 756 KVKSVTVVGRGAVPFQESL-GKEVGERITKLFESKGVKFVMKANVSSFEKNEK-NDVTAA 813
VTV+ R +++L +V + + F + +KF+ V + + + V
Sbjct: 174 FADEVTVIHR-----RDTLRANKVAQ--ARAFANPKMKFIWDTAVEEIQGADSVSGVKLR 226
Query: 814 NLDNG--TTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 871
NL G + + D V + IG V NT ++ V L V V + + TN+P ++A GD+
Sbjct: 227 NLKTGEVSELATDGVFIFIGHVPNTAFVKDT-VSLRDDGYVDVRDEIYTNIPMLFAAGDV 285
Query: 872 A 872
+
Sbjct: 286 S 286
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 121/301 (40%), Gaps = 53/301 (17%)
Query: 1070 IVVGGGPSGATCVETLRQNGFTGK--LYFITDENFLPYDRVKLSKQLD--------IKAD 1119
+++GGGP+G T +TG+ L + E +P ++ S++++ I
Sbjct: 12 VIIGGGPAGLTAAI------YTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGM 65
Query: 1120 SILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDF-------------TKI 1166
+ R + + +K + E++E + D TS + +
Sbjct: 66 ELAQRMHQ----------QAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAV 115
Query: 1167 YLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCAS 1226
LATG+ PR + N F+ + V VVVIG +E F
Sbjct: 116 ILATGADPRKLGIPGEDN--FWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTK 173
Query: 1227 KVKSVTVVGRGAVPFQESL-GKEVGERITKLFESKGVKFVMKANVSSFEKNEK-NDVTAA 1284
VTV+ R +++L +V + + F + +KF+ V + + + V
Sbjct: 174 FADEVTVIHR-----RDTLRANKVAQ--ARAFANPKMKFIWDTAVEEIQGADSVSGVKLR 226
Query: 1285 NLDNG--TTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 1342
NL G + + D V + IG V NT ++ V L V V + + TN+P ++A GD+
Sbjct: 227 NLKTGEVSELATDGVFIFIGHVPNTAFVKDT-VSLRDDGYVDVRDEIYTNIPMLFAAGDV 285
Query: 1343 A 1343
+
Sbjct: 286 S 286
>pdb|4B1B|A Chain A, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
pdb|4B1B|B Chain B, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
Length = 542
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 79/181 (43%), Gaps = 12/181 (6%)
Query: 143 IYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCA 202
I +ATG P +G ++ +++I +V+G+S++ +E + F
Sbjct: 189 ILIATGCRPHIPDDVEGAKELSIT-----SDDIFSLKKDPGKTLVVGASYVALECSGFLN 243
Query: 203 SKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAAN 262
S VTV R V ++ ++ E +GV F K + + + +D
Sbjct: 244 SLGYDVTVAVRSIV--LRGFDQQCAVKVKLYMEEQGVMF--KNGILPKKLTKMDDKILVE 299
Query: 263 LDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKA---VVVNEYLETNVPGVYAGGDI 319
+ T+ D V+ IG + + L+ + + +N K+ ++ + TN+P ++A GD+
Sbjct: 300 FSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDV 359
Query: 320 A 320
A
Sbjct: 360 A 360
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 79/181 (43%), Gaps = 12/181 (6%)
Query: 695 IYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCA 754
I +ATG P +G ++ +++I +V+G+S++ +E + F
Sbjct: 189 ILIATGCRPHIPDDVEGAKELSIT-----SDDIFSLKKDPGKTLVVGASYVALECSGFLN 243
Query: 755 SKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAAN 814
S VTV R V ++ ++ E +GV F K + + + +D
Sbjct: 244 SLGYDVTVAVRSIV--LRGFDQQCAVKVKLYMEEQGVMF--KNGILPKKLTKMDDKILVE 299
Query: 815 LDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKA---VVVNEYLETNVPGVYAGGDI 871
+ T+ D V+ IG + + L+ + + +N K+ ++ + TN+P ++A GD+
Sbjct: 300 FSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDV 359
Query: 872 A 872
A
Sbjct: 360 A 360
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 79/181 (43%), Gaps = 12/181 (6%)
Query: 1166 IYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCA 1225
I +ATG P +G ++ +++I +V+G+S++ +E + F
Sbjct: 189 ILIATGCRPHIPDDVEGAKELSIT-----SDDIFSLKKDPGKTLVVGASYVALECSGFLN 243
Query: 1226 SKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAAN 1285
S VTV R V ++ ++ E +GV F K + + + +D
Sbjct: 244 SLGYDVTVAVRSIV--LRGFDQQCAVKVKLYMEEQGVMF--KNGILPKKLTKMDDKILVE 299
Query: 1286 LDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKA---VVVNEYLETNVPGVYAGGDI 1342
+ T+ D V+ IG + + L+ + + +N K+ ++ + TN+P ++A GD+
Sbjct: 300 FSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDV 359
Query: 1343 A 1343
A
Sbjct: 360 A 360
>pdb|2QPZ|A Chain A, Naphthalene 1,2-Dioxygenase Rieske Ferredoxin
Length = 103
Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 33/75 (44%)
Query: 962 LTVGMDPLAAQFAERNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDF 1021
+TV LA E IYA C+H A + G L + CP H F++ TG
Sbjct: 21 VTVEGKELALYEVEGEIYATDNLCTHGSARMSDGYLEGREIECPLHQGRFDVCTGKALCA 80
Query: 1022 PGMDSLPCYKVTIQN 1036
P ++ Y V I+N
Sbjct: 81 PVTQNIKTYPVKIEN 95
Score = 38.1 bits (87), Expect = 0.032, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 27/59 (45%)
Query: 507 IYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQN 565
IYA C+H A + G L + CP H F++ TG P ++ Y V I+N
Sbjct: 37 IYATDNLCTHGSARMSDGYLEGREIECPLHQGRFDVCTGKALCAPVTQNIKTYPVKIEN 95
>pdb|3URH|A Chain A, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3URH|B Chain B, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 491
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 225 EVGERITKLFESKGVKFVMKANVS-SFEKNEKNDVTAANLDNG--TTIPADLVIVGIGTV 281
EV +++ + +G+ F + A V+ + + + VT + G TT+ A++V++ G
Sbjct: 240 EVAKQLQRXLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRK 299
Query: 282 LNTNYLD--GKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAP 323
+T+ L GV L+ + V ++ + +T++ GVYA GD+ P
Sbjct: 300 PSTDGLGLAKAGVVLDSRGRVEIDRHFQTSIAGVYAIGDVVRGP 343
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 777 EVGERITKLFESKGVKFVMKANVS-SFEKNEKNDVTAANLDNG--TTIPADLVIVGIGTV 833
EV +++ + +G+ F + A V+ + + + VT + G TT+ A++V++ G
Sbjct: 240 EVAKQLQRXLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRK 299
Query: 834 LNTNYLD--GKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAP 875
+T+ L GV L+ + V ++ + +T++ GVYA GD+ P
Sbjct: 300 PSTDGLGLAKAGVVLDSRGRVEIDRHFQTSIAGVYAIGDVVRGP 343
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 1248 EVGERITKLFESKGVKFVMKANVS-SFEKNEKNDVTAANLDNG--TTIPADLVIVGIGTV 1304
EV +++ + +G+ F + A V+ + + + VT + G TT+ A++V++ G
Sbjct: 240 EVAKQLQRXLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRK 299
Query: 1305 LNTNYLD--GKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAP 1346
+T+ L GV L+ + V ++ + +T++ GVYA GD+ P
Sbjct: 300 PSTDGLGLAKAGVVLDSRGRVEIDRHFQTSIAGVYAIGDVVRGP 343
>pdb|2QAE|A Chain A, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
pdb|2QAE|B Chain B, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
Length = 468
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 103/270 (38%), Gaps = 33/270 (12%)
Query: 71 LYFITDENFLPY----------DRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKII 120
LY NF Y D K+ +Q + + E +K N + KG+
Sbjct: 58 LYHDAHANFARYGLMGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEG-- 115
Query: 121 SDSELNEKKIKLQDGTS--IDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPH 178
S + ++ DG ++ K +ATGS P + KV T +A
Sbjct: 116 SFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVVLSST----GALALP 171
Query: 179 ITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITK-----L 233
P++ +VVIG IG+E + A VTVV F + E +T L
Sbjct: 172 RVPKT-MVVIGGGVIGLELGSVWARLGAEVTVV-----EFAPRCAPTLDEDVTNALVGAL 225
Query: 234 FESKGVKFVMKANVSSFEKNEKNDVTAANLDNG----TTIPADLVIVGIGTVLNTNYLDG 289
+++ +KF+ V N + NG T A LV VG LD
Sbjct: 226 AKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDK 285
Query: 290 KGVELNGQKAVVVNEYLETNVPGVYAGGDI 319
V N + V + ++ ET++P VYA GD+
Sbjct: 286 INVAKNERGFVKIGDHFETSIPDVYAIGDV 315
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 103/270 (38%), Gaps = 33/270 (12%)
Query: 623 LYFITDENFLPY----------DRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKII 672
LY NF Y D K+ +Q + + E +K N + KG+
Sbjct: 58 LYHDAHANFARYGLMGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEG-- 115
Query: 673 SDSELNEKKIKLQDGTS--IDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPH 730
S + ++ DG ++ K +ATGS P + KV T +A
Sbjct: 116 SFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVVLSST----GALALP 171
Query: 731 ITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITK-----L 785
P++ +VVIG IG+E + A VTVV F + E +T L
Sbjct: 172 RVPKT-MVVIGGGVIGLELGSVWARLGAEVTVV-----EFAPRCAPTLDEDVTNALVGAL 225
Query: 786 FESKGVKFVMKANVSSFEKNEKNDVTAANLDNG----TTIPADLVIVGIGTVLNTNYLDG 841
+++ +KF+ V N + NG T A LV VG LD
Sbjct: 226 AKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDK 285
Query: 842 KGVELNGQKAVVVNEYLETNVPGVYAGGDI 871
V N + V + ++ ET++P VYA GD+
Sbjct: 286 INVAKNERGFVKIGDHFETSIPDVYAIGDV 315
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 103/270 (38%), Gaps = 33/270 (12%)
Query: 1094 LYFITDENFLPY----------DRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKII 1143
LY NF Y D K+ +Q + + E +K N + KG+
Sbjct: 58 LYHDAHANFARYGLMGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEG-- 115
Query: 1144 SDSELNEKKIKLQDGTS--IDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPH 1201
S + ++ DG ++ K +ATGS P + KV T +A
Sbjct: 116 SFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVVLSST----GALALP 171
Query: 1202 ITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITK-----L 1256
P++ +VVIG IG+E + A VTVV F + E +T L
Sbjct: 172 RVPKT-MVVIGGGVIGLELGSVWARLGAEVTVV-----EFAPRCAPTLDEDVTNALVGAL 225
Query: 1257 FESKGVKFVMKANVSSFEKNEKNDVTAANLDNG----TTIPADLVIVGIGTVLNTNYLDG 1312
+++ +KF+ V N + NG T A LV VG LD
Sbjct: 226 AKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDK 285
Query: 1313 KGVELNGQKAVVVNEYLETNVPGVYAGGDI 1342
V N + V + ++ ET++P VYA GD+
Sbjct: 286 INVAKNERGFVKIGDHFETSIPDVYAIGDV 315
>pdb|2A8X|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2A8X|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
Length = 464
Score = 37.7 bits (86), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 215 AVPFQESLGKEVGERITKLFESKGVKFVMKANVSSF-EKNEKNDVTAANLDNGTTIPADL 273
A+P +++ +V + I K F+ GV + V S + + VT + A+
Sbjct: 206 ALPNEDA---DVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEK 262
Query: 274 VIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 319
V+ IG N LD GV L +KA+ V++Y TNV +YA GD+
Sbjct: 263 VLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYXRTNVGHIYAIGDV 310
Score = 37.7 bits (86), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 767 AVPFQESLGKEVGERITKLFESKGVKFVMKANVSSF-EKNEKNDVTAANLDNGTTIPADL 825
A+P +++ +V + I K F+ GV + V S + + VT + A+
Sbjct: 206 ALPNEDA---DVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEK 262
Query: 826 VIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 871
V+ IG N LD GV L +KA+ V++Y TNV +YA GD+
Sbjct: 263 VLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYXRTNVGHIYAIGDV 310
Score = 37.7 bits (86), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 1238 AVPFQESLGKEVGERITKLFESKGVKFVMKANVSSF-EKNEKNDVTAANLDNGTTIPADL 1296
A+P +++ +V + I K F+ GV + V S + + VT + A+
Sbjct: 206 ALPNEDA---DVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEK 262
Query: 1297 VIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 1342
V+ IG N LD GV L +KA+ V++Y TNV +YA GD+
Sbjct: 263 VLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYXRTNVGHIYAIGDV 310
>pdb|3GKE|A Chain A, Crystal Structure Of Dicamba Monooxygenase
pdb|3GKE|B Chain B, Crystal Structure Of Dicamba Monooxygenase
pdb|3GKE|C Chain C, Crystal Structure Of Dicamba Monooxygenase
pdb|3GB4|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dicamba
pdb|3GB4|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dicamba
pdb|3GB4|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dicamba
pdb|3GOB|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dcsa
pdb|3GOB|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dcsa
pdb|3GOB|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dcsa
pdb|3GTE|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron
pdb|3GTE|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron
pdb|3GTE|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron
pdb|3GTS|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron And Dicamba
pdb|3GTS|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron And Dicamba
pdb|3GTS|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron And Dicamba
pdb|3GL0|A Chain A, Crystal Structure Of Dicamba Monooxygenase Bound To 3,6
Dichlorosalicylic Acid (Dcsa)
pdb|3GL0|B Chain B, Crystal Structure Of Dicamba Monooxygenase Bound To 3,6
Dichlorosalicylic Acid (Dcsa)
pdb|3GL0|C Chain C, Crystal Structure Of Dicamba Monooxygenase Bound To 3,6
Dichlorosalicylic Acid (Dcsa)
pdb|3GL2|A Chain A, Crystal Structure Of Dicamba Monooxygenase Bound To
Dicamba
pdb|3GL2|B Chain B, Crystal Structure Of Dicamba Monooxygenase Bound To
Dicamba
pdb|3GL2|C Chain C, Crystal Structure Of Dicamba Monooxygenase Bound To
Dicamba
Length = 349
Score = 37.4 bits (85), Expect = 0.057, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 467 RTQWLTSILPLIGSSFSQSTLAISPASSTPKTLAQSTTSNIYAVGTKCSHYGAPLVKGSL 526
R W + LP S+ L + TP L + + A+ C H APL G L
Sbjct: 6 RNAWYVAALP---EELSEKPLGRT-ILDTPLALYRQPDGVVAALLDICPHRFAPLSDGIL 61
Query: 527 GDGRVRCPWHGACFN 541
+G ++CP+HG F+
Sbjct: 62 VNGHLQCPYHGLEFD 76
Score = 33.5 bits (75), Expect = 0.86, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 985 CSHYGAPLVKGSLGDGRVRCPWHGACFN 1012
C H APL G L +G ++CP+HG F+
Sbjct: 49 CPHRFAPLSDGILVNGHLQCPYHGLEFD 76
>pdb|2EQ6|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ6|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ8|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ9|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|G Chain G, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|H Chain H, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|J Chain J, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|K Chain K, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
Length = 464
Score = 37.4 bits (85), Expect = 0.062, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 287 LDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPL 324
L+ GV+++ + + VN +ET+VPGVYA GD A PL
Sbjct: 278 LEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPL 315
Score = 37.4 bits (85), Expect = 0.062, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 839 LDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPL 876
L+ GV+++ + + VN +ET+VPGVYA GD A PL
Sbjct: 278 LEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPL 315
Score = 37.4 bits (85), Expect = 0.062, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 1310 LDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPL 1347
L+ GV+++ + + VN +ET+VPGVYA GD A PL
Sbjct: 278 LEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPL 315
>pdb|1HYU|A Chain A, Crystal Structure Of Intact Ahpf
Length = 521
Score = 37.0 bits (84), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 274 VIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAP 323
+ V IG + NT++L+G +E N ++++ ET+V GV+A GD P
Sbjct: 445 IFVQIGLLPNTHWLEG-ALERNRMGEIIIDAKCETSVKGVFAAGDCTTVP 493
Score = 37.0 bits (84), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 826 VIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAP 875
+ V IG + NT++L+G +E N ++++ ET+V GV+A GD P
Sbjct: 445 IFVQIGLLPNTHWLEG-ALERNRMGEIIIDAKCETSVKGVFAAGDCTTVP 493
Score = 37.0 bits (84), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 1297 VIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAP 1346
+ V IG + NT++L+G +E N ++++ ET+V GV+A GD P
Sbjct: 445 IFVQIGLLPNTHWLEG-ALERNRMGEIIIDAKCETSVKGVFAAGDCTTVP 493
>pdb|3F8P|A Chain A, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|B Chain B, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|C Chain C, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|D Chain D, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8R|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
Length = 323
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 239 VKFVMKANVSSFEKNEK-NDVTAANLDNGTTIPADL--VIVGIGTVLNTNYLDGKGVELN 295
V+FV+ + V + ++ V NL G ++ V + IG T++ G+E +
Sbjct: 205 VEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETD 264
Query: 296 GQKAVVVNEYLETNVPGVYAGGDIAYAPL 324
+ V+E++ T+VPGV+A GD A L
Sbjct: 265 TNGYIKVDEWMRTSVPGVFAAGDCTSAWL 293
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 791 VKFVMKANVSSFEKNEK-NDVTAANLDNGTTIPADL--VIVGIGTVLNTNYLDGKGVELN 847
V+FV+ + V + ++ V NL G ++ V + IG T++ G+E +
Sbjct: 205 VEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETD 264
Query: 848 GQKAVVVNEYLETNVPGVYAGGDIAYAPL 876
+ V+E++ T+VPGV+A GD A L
Sbjct: 265 TNGYIKVDEWMRTSVPGVFAAGDCTSAWL 293
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 1262 VKFVMKANVSSFEKNEK-NDVTAANLDNGTTIPADL--VIVGIGTVLNTNYLDGKGVELN 1318
V+FV+ + V + ++ V NL G ++ V + IG T++ G+E +
Sbjct: 205 VEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETD 264
Query: 1319 GQKAVVVNEYLETNVPGVYAGGDIAYAPL 1347
+ V+E++ T+VPGV+A GD A L
Sbjct: 265 TNGYIKVDEWMRTSVPGVFAAGDCTSAWL 293
>pdb|3F8D|A Chain A, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|B Chain B, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|C Chain C, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|D Chain D, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
Length = 323
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 239 VKFVMKANVSSFEKNEK-NDVTAANLDNGTTIPADL--VIVGIGTVLNTNYLDGKGVELN 295
V+FV+ + V + ++ V NL G ++ V + IG T++ G+E +
Sbjct: 205 VEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETD 264
Query: 296 GQKAVVVNEYLETNVPGVYAGGDIAYAPL 324
+ V+E++ T+VPGV+A GD A L
Sbjct: 265 TNGYIKVDEWMRTSVPGVFAAGDCTSAWL 293
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 791 VKFVMKANVSSFEKNEK-NDVTAANLDNGTTIPADL--VIVGIGTVLNTNYLDGKGVELN 847
V+FV+ + V + ++ V NL G ++ V + IG T++ G+E +
Sbjct: 205 VEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETD 264
Query: 848 GQKAVVVNEYLETNVPGVYAGGDIAYAPL 876
+ V+E++ T+VPGV+A GD A L
Sbjct: 265 TNGYIKVDEWMRTSVPGVFAAGDCTSAWL 293
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 1262 VKFVMKANVSSFEKNEK-NDVTAANLDNGTTIPADL--VIVGIGTVLNTNYLDGKGVELN 1318
V+FV+ + V + ++ V NL G ++ V + IG T++ G+E +
Sbjct: 205 VEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETD 264
Query: 1319 GQKAVVVNEYLETNVPGVYAGGDIAYAPL 1347
+ V+E++ T+VPGV+A GD A L
Sbjct: 265 TNGYIKVDEWMRTSVPGVFAAGDCTSAWL 293
>pdb|3NTD|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C531s Mutant
pdb|3NTD|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C531s Mutant
Length = 565
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 95/244 (38%), Gaps = 26/244 (10%)
Query: 131 KLQDGTSID--FTKIYLATGSSPRTISQADGVNK--VFYLRTVEDANNIAPHITPES--N 184
+L DG+ + + L+ G++P + GV+ LR + D + I I + +
Sbjct: 95 RLLDGSEYQESYDTLLLSPGAAP-IVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEH 153
Query: 185 VVVIGSSFIG---MEAAAFCASKV-------KSVTVVGRGAVPFQESLGKEVGERITKLF 234
V+G FIG ME+ K + +T V R F ++ G +
Sbjct: 154 ATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGT 213
Query: 235 ESKGVKFVMKANVSSFEKNEKNDVT------AANLDNGTTIPADLVIVGIGTVLNTNYLD 288
V + ++ +V+S E + L NG + DL+I+ IG T
Sbjct: 214 ALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQLAR 273
Query: 289 GKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQ-LAQYHGRIA 347
G+ + + VN ++T+ P +YA GD F A + A GR+A
Sbjct: 274 DAGLAIGELGGIKVNAMMQTSDPAIYAVGDAVEE--QDFVTGQACLVPLAGPANRQGRMA 331
Query: 348 ALNM 351
A NM
Sbjct: 332 ADNM 335
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 95/244 (38%), Gaps = 26/244 (10%)
Query: 683 KLQDGTSID--FTKIYLATGSSPRTISQADGVNK--VFYLRTVEDANNIAPHITPES--N 736
+L DG+ + + L+ G++P + GV+ LR + D + I I + +
Sbjct: 95 RLLDGSEYQESYDTLLLSPGAAP-IVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEH 153
Query: 737 VVVIGSSFIG---MEAAAFCASKV-------KSVTVVGRGAVPFQESLGKEVGERITKLF 786
V+G FIG ME+ K + +T V R F ++ G +
Sbjct: 154 ATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGT 213
Query: 787 ESKGVKFVMKANVSSFEKNEKNDVT------AANLDNGTTIPADLVIVGIGTVLNTNYLD 840
V + ++ +V+S E + L NG + DL+I+ IG T
Sbjct: 214 ALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQLAR 273
Query: 841 GKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQ-LAQYHGRIA 899
G+ + + VN ++T+ P +YA GD F A + A GR+A
Sbjct: 274 DAGLAIGELGGIKVNAMMQTSDPAIYAVGDAVEE--QDFVTGQACLVPLAGPANRQGRMA 331
Query: 900 ALNM 903
A NM
Sbjct: 332 ADNM 335
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 95/244 (38%), Gaps = 26/244 (10%)
Query: 1154 KLQDGTSID--FTKIYLATGSSPRTISQADGVNK--VFYLRTVEDANNIAPHITPES--N 1207
+L DG+ + + L+ G++P + GV+ LR + D + I I + +
Sbjct: 95 RLLDGSEYQESYDTLLLSPGAAP-IVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEH 153
Query: 1208 VVVIGSSFIG---MEAAAFCASKV-------KSVTVVGRGAVPFQESLGKEVGERITKLF 1257
V+G FIG ME+ K + +T V R F ++ G +
Sbjct: 154 ATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGT 213
Query: 1258 ESKGVKFVMKANVSSFEKNEKNDVT------AANLDNGTTIPADLVIVGIGTVLNTNYLD 1311
V + ++ +V+S E + L NG + DL+I+ IG T
Sbjct: 214 ALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQLAR 273
Query: 1312 GKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQ-LAQYHGRIA 1370
G+ + + VN ++T+ P +YA GD F A + A GR+A
Sbjct: 274 DAGLAIGELGGIKVNAMMQTSDPAIYAVGDAVEE--QDFVTGQACLVPLAGPANRQGRMA 331
Query: 1371 ALNM 1374
A NM
Sbjct: 332 ADNM 335
>pdb|1H7W|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig
pdb|1H7W|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig
pdb|1H7W|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig
pdb|1H7W|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig
pdb|1GT8|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And Uracil-4-Acetic Acid
pdb|1GT8|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And Uracil-4-Acetic Acid
pdb|1GT8|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And Uracil-4-Acetic Acid
pdb|1GT8|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And Uracil-4-Acetic Acid
pdb|1GTE|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Binary
Complex With 5-Iodouracil
pdb|1GTE|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Binary
Complex With 5-Iodouracil
pdb|1GTE|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Binary
Complex With 5-Iodouracil
pdb|1GTE|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Binary
Complex With 5-Iodouracil
pdb|1GTH|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And 5-Iodouracil
pdb|1GTH|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And 5-Iodouracil
pdb|1GTH|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And 5-Iodouracil
pdb|1GTH|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And 5-Iodouracil
Length = 1025
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 140/348 (40%), Gaps = 69/348 (19%)
Query: 48 VVGGGPSGATCVETLRQNGFTGKLYFITDENF------------LPYDRVKLSKQLDIKA 95
++G GP+ +C L + G++ F E LPYD V +L
Sbjct: 192 LLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIEL---- 247
Query: 96 DSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT-- 153
KD + +I GK + S++E+ +K ++G F I L P+T
Sbjct: 248 ----------MKDLGVKIICGKSL-SENEITLNTLK-EEGYKAAFIGIGL---PEPKTDD 292
Query: 154 ISQADGVNKVFY-----LRTVEDANNI------APHITPESNVVVIG---SSFIGMEAAA 199
I Q ++ FY L V ++ +P + V+V+G ++F +A
Sbjct: 293 IFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSAL 352
Query: 200 FCASKVKSVTVVGRG-----AVPFQESLGKEVGERITKLFESKGVKFVMKAN---VSSFE 251
C ++ + V +G AVP + L KE + K ++K F
Sbjct: 353 RCGAR-RVFLVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPR--KVIVKGGRIVAVQFV 409
Query: 252 KNEKNDVTAANLDNGTTI--PADLVIVGIGTVLNTNYLDG--KGVELNGQKAVVVN-EYL 306
+ E+++ N D + AD+VI G+VL + ++ N V+ E +
Sbjct: 410 RTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETM 469
Query: 307 ETNVPGVYAGGDI---AYAPLHSFYN-KNAS--IGHYQLAQYHGRIAA 348
+T+ P V+AGGDI A + S + K AS I Y AQY ++A
Sbjct: 470 QTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQAQYGASVSA 517
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 140/348 (40%), Gaps = 69/348 (19%)
Query: 600 VVGGGPSGATCVETLRQNGFTGKLYFITDENF------------LPYDRVKLSKQLDIKA 647
++G GP+ +C L + G++ F E LPYD V +L
Sbjct: 192 LLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIEL---- 247
Query: 648 DSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT-- 705
KD + +I GK + S++E+ +K ++G F I L P+T
Sbjct: 248 ----------MKDLGVKIICGKSL-SENEITLNTLK-EEGYKAAFIGIGL---PEPKTDD 292
Query: 706 ISQADGVNKVFY-----LRTVEDANNI------APHITPESNVVVIG---SSFIGMEAAA 751
I Q ++ FY L V ++ +P + V+V+G ++F +A
Sbjct: 293 IFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSAL 352
Query: 752 FCASKVKSVTVVGRG-----AVPFQESLGKEVGERITKLFESKGVKFVMKAN---VSSFE 803
C ++ + V +G AVP + L KE + K ++K F
Sbjct: 353 RCGAR-RVFLVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPR--KVIVKGGRIVAVQFV 409
Query: 804 KNEKNDVTAANLDNGTTI--PADLVIVGIGTVLNTNYLDG--KGVELNGQKAVVVN-EYL 858
+ E+++ N D + AD+VI G+VL + ++ N V+ E +
Sbjct: 410 RTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETM 469
Query: 859 ETNVPGVYAGGDI---AYAPLHSFYN-KNAS--IGHYQLAQYHGRIAA 900
+T+ P V+AGGDI A + S + K AS I Y AQY ++A
Sbjct: 470 QTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQAQYGASVSA 517
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 140/348 (40%), Gaps = 69/348 (19%)
Query: 1071 VVGGGPSGATCVETLRQNGFTGKLYFITDENF------------LPYDRVKLSKQLDIKA 1118
++G GP+ +C L + G++ F E LPYD V +L
Sbjct: 192 LLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIEL---- 247
Query: 1119 DSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT-- 1176
KD + +I GK + S++E+ +K ++G F I L P+T
Sbjct: 248 ----------MKDLGVKIICGKSL-SENEITLNTLK-EEGYKAAFIGIGL---PEPKTDD 292
Query: 1177 ISQADGVNKVFY-----LRTVEDANNI------APHITPESNVVVIG---SSFIGMEAAA 1222
I Q ++ FY L V ++ +P + V+V+G ++F +A
Sbjct: 293 IFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSAL 352
Query: 1223 FCASKVKSVTVVGRG-----AVPFQESLGKEVGERITKLFESKGVKFVMKAN---VSSFE 1274
C ++ + V +G AVP + L KE + K ++K F
Sbjct: 353 RCGAR-RVFLVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPR--KVIVKGGRIVAVQFV 409
Query: 1275 KNEKNDVTAANLDNGTTI--PADLVIVGIGTVLNTNYLDG--KGVELNGQKAVVVN-EYL 1329
+ E+++ N D + AD+VI G+VL + ++ N V+ E +
Sbjct: 410 RTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETM 469
Query: 1330 ETNVPGVYAGGDI---AYAPLHSFYN-KNAS--IGHYQLAQYHGRIAA 1371
+T+ P V+AGGDI A + S + K AS I Y AQY ++A
Sbjct: 470 QTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQAQYGASVSA 517
>pdb|1H7X|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex Of A Mutant Enzyme (C671a), Nadph And 5-
Fluorouracil
pdb|1H7X|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex Of A Mutant Enzyme (C671a), Nadph And 5-
Fluorouracil
pdb|1H7X|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex Of A Mutant Enzyme (C671a), Nadph And 5-
Fluorouracil
pdb|1H7X|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex Of A Mutant Enzyme (C671a), Nadph And 5-
Fluorouracil
Length = 1025
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 140/348 (40%), Gaps = 69/348 (19%)
Query: 48 VVGGGPSGATCVETLRQNGFTGKLYFITDENF------------LPYDRVKLSKQLDIKA 95
++G GP+ +C L + G++ F E LPYD V +L
Sbjct: 192 LLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIEL---- 247
Query: 96 DSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT-- 153
KD + +I GK + S++E+ +K ++G F I L P+T
Sbjct: 248 ----------MKDLGVKIICGKSL-SENEITLNTLK-EEGYKAAFIGIGL---PEPKTDD 292
Query: 154 ISQADGVNKVFY-----LRTVEDANNI------APHITPESNVVVIG---SSFIGMEAAA 199
I Q ++ FY L V ++ +P + V+V+G ++F +A
Sbjct: 293 IFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSAL 352
Query: 200 FCASKVKSVTVVGRG-----AVPFQESLGKEVGERITKLFESKGVKFVMKAN---VSSFE 251
C ++ + V +G AVP + L KE + K ++K F
Sbjct: 353 RCGAR-RVFLVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPR--KVIVKGGRIVAVQFV 409
Query: 252 KNEKNDVTAANLDNGTTI--PADLVIVGIGTVLNTNYLDG--KGVELNGQKAVVVN-EYL 306
+ E+++ N D + AD+VI G+VL + ++ N V+ E +
Sbjct: 410 RTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETM 469
Query: 307 ETNVPGVYAGGDI---AYAPLHSFYN-KNAS--IGHYQLAQYHGRIAA 348
+T+ P V+AGGDI A + S + K AS I Y AQY ++A
Sbjct: 470 QTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQAQYGASVSA 517
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 140/348 (40%), Gaps = 69/348 (19%)
Query: 600 VVGGGPSGATCVETLRQNGFTGKLYFITDENF------------LPYDRVKLSKQLDIKA 647
++G GP+ +C L + G++ F E LPYD V +L
Sbjct: 192 LLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIEL---- 247
Query: 648 DSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT-- 705
KD + +I GK + S++E+ +K ++G F I L P+T
Sbjct: 248 ----------MKDLGVKIICGKSL-SENEITLNTLK-EEGYKAAFIGIGL---PEPKTDD 292
Query: 706 ISQADGVNKVFY-----LRTVEDANNI------APHITPESNVVVIG---SSFIGMEAAA 751
I Q ++ FY L V ++ +P + V+V+G ++F +A
Sbjct: 293 IFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSAL 352
Query: 752 FCASKVKSVTVVGRG-----AVPFQESLGKEVGERITKLFESKGVKFVMKAN---VSSFE 803
C ++ + V +G AVP + L KE + K ++K F
Sbjct: 353 RCGAR-RVFLVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPR--KVIVKGGRIVAVQFV 409
Query: 804 KNEKNDVTAANLDNGTTI--PADLVIVGIGTVLNTNYLDG--KGVELNGQKAVVVN-EYL 858
+ E+++ N D + AD+VI G+VL + ++ N V+ E +
Sbjct: 410 RTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETM 469
Query: 859 ETNVPGVYAGGDI---AYAPLHSFYN-KNAS--IGHYQLAQYHGRIAA 900
+T+ P V+AGGDI A + S + K AS I Y AQY ++A
Sbjct: 470 QTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQAQYGASVSA 517
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 140/348 (40%), Gaps = 69/348 (19%)
Query: 1071 VVGGGPSGATCVETLRQNGFTGKLYFITDENF------------LPYDRVKLSKQLDIKA 1118
++G GP+ +C L + G++ F E LPYD V +L
Sbjct: 192 LLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIEL---- 247
Query: 1119 DSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT-- 1176
KD + +I GK + S++E+ +K ++G F I L P+T
Sbjct: 248 ----------MKDLGVKIICGKSL-SENEITLNTLK-EEGYKAAFIGIGL---PEPKTDD 292
Query: 1177 ISQADGVNKVFY-----LRTVEDANNI------APHITPESNVVVIG---SSFIGMEAAA 1222
I Q ++ FY L V ++ +P + V+V+G ++F +A
Sbjct: 293 IFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSAL 352
Query: 1223 FCASKVKSVTVVGRG-----AVPFQESLGKEVGERITKLFESKGVKFVMKAN---VSSFE 1274
C ++ + V +G AVP + L KE + K ++K F
Sbjct: 353 RCGAR-RVFLVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPR--KVIVKGGRIVAVQFV 409
Query: 1275 KNEKNDVTAANLDNGTTI--PADLVIVGIGTVLNTNYLDG--KGVELNGQKAVVVN-EYL 1329
+ E+++ N D + AD+VI G+VL + ++ N V+ E +
Sbjct: 410 RTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETM 469
Query: 1330 ETNVPGVYAGGDI---AYAPLHSFYN-KNAS--IGHYQLAQYHGRIAA 1371
+T+ P V+AGGDI A + S + K AS I Y AQY ++A
Sbjct: 470 QTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQAQYGASVSA 517
>pdb|1JEH|A Chain A, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1JEH|B Chain B, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1V59|A Chain A, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
pdb|1V59|B Chain B, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
Length = 478
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 216 VPFQESLGK----EVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTT--- 268
V FQ +G EV + K + +G+ F + V S ++N+ +V +++ T
Sbjct: 212 VEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQ 271
Query: 269 --IPADLVIVGIGTVLNTNYLDGKG-----VELNGQKAVVVNEYLETNVPGVYAGGDIAY 321
+ A++++V +G Y+ G G +E++ + +V+++ + P + GD+ +
Sbjct: 272 ENLEAEVLLVAVG---RRPYIAGLGAEKIGLEVDKRGRLVIDDQFNSKFPHIKVVGDVTF 328
Query: 322 APLHSFYNKNASIGHYQLAQY-HGRI 346
P+ + + I ++ + HG +
Sbjct: 329 GPMLAHKAEEEGIAAVEMLKTGHGHV 354
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 768 VPFQESLGK----EVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTT--- 820
V FQ +G EV + K + +G+ F + V S ++N+ +V +++ T
Sbjct: 212 VEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQ 271
Query: 821 --IPADLVIVGIGTVLNTNYLDGKG-----VELNGQKAVVVNEYLETNVPGVYAGGDIAY 873
+ A++++V +G Y+ G G +E++ + +V+++ + P + GD+ +
Sbjct: 272 ENLEAEVLLVAVG---RRPYIAGLGAEKIGLEVDKRGRLVIDDQFNSKFPHIKVVGDVTF 328
Query: 874 APLHSFYNKNASIGHYQLAQY-HGRI 898
P+ + + I ++ + HG +
Sbjct: 329 GPMLAHKAEEEGIAAVEMLKTGHGHV 354
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 1239 VPFQESLGK----EVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTT--- 1291
V FQ +G EV + K + +G+ F + V S ++N+ +V +++ T
Sbjct: 212 VEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQ 271
Query: 1292 --IPADLVIVGIGTVLNTNYLDGKG-----VELNGQKAVVVNEYLETNVPGVYAGGDIAY 1344
+ A++++V +G Y+ G G +E++ + +V+++ + P + GD+ +
Sbjct: 272 ENLEAEVLLVAVG---RRPYIAGLGAEKIGLEVDKRGRLVIDDQFNSKFPHIKVVGDVTF 328
Query: 1345 APLHSFYNKNASIGHYQLAQY-HGRI 1369
P+ + + I ++ + HG +
Sbjct: 329 GPMLAHKAEEEGIAAVEMLKTGHGHV 354
>pdb|3DQY|A Chain A, Crystal Structure Of Toluene 2,3-Dioxygenase Ferredoxin
Length = 106
Score = 35.4 bits (80), Expect = 0.24, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Query: 965 GMDPLAAQFAERNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGM 1024
G +P+ + +AV C+H L G L V C H F + TG ++ P
Sbjct: 22 GPEPVMVCNVDGEFFAVQDTCTHGDWALSDGYLDGDIVECTLHFGKFXVRTGKVKALPAC 81
Query: 1025 DSLPCYKVTIQNDDSVVVQARKDELK 1050
+ + + ++ D+ V V ELK
Sbjct: 82 KPIKVFPIKVEGDE-VHVDLDNGELK 106
Score = 33.5 bits (75), Expect = 0.85, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 508 YAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDD 567
+AV C+H L G L V C H F + TG ++ P + + + ++ D+
Sbjct: 36 FAVQDTCTHGDWALSDGYLDGDIVECTLHFGKFXVRTGKVKALPACKPIKVFPIKVEGDE 95
Query: 568 SVVVQARKDELK 579
V V ELK
Sbjct: 96 -VHVDLDNGELK 106
>pdb|4EMJ|B Chain B, Complex Between The Reductase And Ferredoxin Components Of
Toluene Dioxygenase
Length = 107
Score = 34.7 bits (78), Expect = 0.38, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Query: 965 GMDPLAAQFAERNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGM 1024
G +P+ + +AV C+H L G L V C H F + TG ++ P
Sbjct: 23 GPEPVMVCNVDGEFFAVQDTCTHGDWALSDGYLDGDIVECTLHFGKFCVRTGKVKALPAC 82
Query: 1025 DSLPCYKVTIQNDDSVVVQARKDELK 1050
+ + + ++ D+ V V ELK
Sbjct: 83 KPIKVFPIKVEGDE-VHVDLDNGELK 107
Score = 33.1 bits (74), Expect = 1.3, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 508 YAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDD 567
+AV C+H L G L V C H F + TG ++ P + + + ++ D+
Sbjct: 37 FAVQDTCTHGDWALSDGYLDGDIVECTLHFGKFCVRTGKVKALPACKPIKVFPIKVEGDE 96
Query: 568 SVVVQARKDELK 579
V V ELK
Sbjct: 97 -VHVDLDNGELK 107
>pdb|3AZC|A Chain A, Crystal Structure Of The Soluble Part Of Cytochrome B6f
Complex Iron- Sulfur Subunit From Thermosynechococcus
Elongatus Bp-1
Length = 133
Score = 33.9 bits (76), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 942 DLEALKFTAYYSNADKVLAILTVGMDPLAAQFAERNI---YAVGTKCSHYGAPLVKGSLG 998
D++ ++ A + D+ LA G DP E + Y + C+H G +V ++
Sbjct: 16 DIKVSEYLAKHLPGDRSLAQGIKG-DPTYVIVTEDHQIANYGLNAVCTHLGC-VVPWNVS 73
Query: 999 DGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVV 1041
+ + CP HG+ ++ +TG + P SL K T+ DD +V
Sbjct: 74 ENKFICPCHGSQYD-STGKVVRGPAPLSLALVKATVTEDDKLV 115
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 508 YAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDD 567
Y + C+H G +V ++ + + CP HG+ ++ +TG + P SL K T+ DD
Sbjct: 55 YGLNAVCTHLGC-VVPWNVSENKFICPCHGSQYD-STGKVVRGPAPLSLALVKATVTEDD 112
Query: 568 SVV 570
+V
Sbjct: 113 KLV 115
>pdb|2TMD|A Chain A, Correlation Of X-Ray Deduced And Experimental Amino Acid
Sequences Of Trimethylamine Dehydrogenase
pdb|2TMD|B Chain B, Correlation Of X-Ray Deduced And Experimental Amino Acid
Sequences Of Trimethylamine Dehydrogenase
pdb|1DJN|A Chain A, Structural And Biochemical Characterization Of Recombinant
Wild Type Trimethylamine Dehydrogenase From
Methylophilus Methylotrophus (Sp. W3a1)
pdb|1DJN|B Chain B, Structural And Biochemical Characterization Of Recombinant
Wild Type Trimethylamine Dehydrogenase From
Methylophilus Methylotrophus (Sp. W3a1)
pdb|1O94|A Chain A, Ternary Complex Between Trimethylamine Dehydrogenase And
Electron Transferring Flavoprotein
pdb|1O94|B Chain B, Ternary Complex Between Trimethylamine Dehydrogenase And
Electron Transferring Flavoprotein
pdb|1O95|A Chain A, Ternary Complex Between Trimethylamine Dehydrogenase And
Electron Transferring Flavoprotein
pdb|1O95|B Chain B, Ternary Complex Between Trimethylamine Dehydrogenase And
Electron Transferring Flavoprotein
Length = 729
Score = 33.9 bits (76), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 18/156 (11%)
Query: 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLR 101
NKD+ ++VG GPSG+ L ++G+T L + K+ L+ A L
Sbjct: 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAE---------KIGGHLNQVAALPGLG 438
Query: 102 TEEFYKD-NDIHVIKGKKIISDSE--LNEKKIKLQDGTSIDFTKIYLATGSSPRTISQAD 158
+++D + + K K +S+ L +K + D K+ +ATG+ T D
Sbjct: 439 EWSYHRDYRETQITKLLKKNKESQLALGQKPMTADDVLQYGADKVIIATGARWNT----D 494
Query: 159 GVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIG 194
G N + + ++ +TPE V+ G IG
Sbjct: 495 GTNCLTHDPIPGADASLPDQLTPEQ--VMDGKKKIG 528
Score = 33.9 bits (76), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 18/156 (11%)
Query: 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLR 653
NKD+ ++VG GPSG+ L ++G+T L + K+ L+ A L
Sbjct: 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAE---------KIGGHLNQVAALPGLG 438
Query: 654 TEEFYKD-NDIHVIKGKKIISDSE--LNEKKIKLQDGTSIDFTKIYLATGSSPRTISQAD 710
+++D + + K K +S+ L +K + D K+ +ATG+ T D
Sbjct: 439 EWSYHRDYRETQITKLLKKNKESQLALGQKPMTADDVLQYGADKVIIATGARWNT----D 494
Query: 711 GVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIG 746
G N + + ++ +TPE V+ G IG
Sbjct: 495 GTNCLTHDPIPGADASLPDQLTPEQ--VMDGKKKIG 528
Score = 33.9 bits (76), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 18/156 (11%)
Query: 1065 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLR 1124
NKD+ ++VG GPSG+ L ++G+T L + K+ L+ A L
Sbjct: 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAE---------KIGGHLNQVAALPGLG 438
Query: 1125 TEEFYKD-NDIHVIKGKKIISDSE--LNEKKIKLQDGTSIDFTKIYLATGSSPRTISQAD 1181
+++D + + K K +S+ L +K + D K+ +ATG+ T D
Sbjct: 439 EWSYHRDYRETQITKLLKKNKESQLALGQKPMTADDVLQYGADKVIIATGARWNT----D 494
Query: 1182 GVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIG 1217
G N + + ++ +TPE V+ G IG
Sbjct: 495 GTNCLTHDPIPGADASLPDQLTPEQ--VMDGKKKIG 528
>pdb|3D89|A Chain A, Crystal Structure Of A Soluble Rieske Ferredoxin From Mus
Musculus
Length = 157
Score = 33.5 bits (75), Expect = 0.80, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 508 YAVGTKCSHYGAPLVKGSL----GDGRVRCPWHGACFNIATGD 546
+A+ +C H G PL G + G + CPWH +ATG+
Sbjct: 51 HAMDIRCYHSGGPLHLGEIEDFNGQSCIVCPWHKYKITLATGE 93
Score = 33.5 bits (75), Expect = 0.80, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 979 YAVGTKCSHYGAPLVKGSL----GDGRVRCPWHGACFNIATGD 1017
+A+ +C H G PL G + G + CPWH +ATG+
Sbjct: 51 HAMDIRCYHSGGPLHLGEIEDFNGQSCIVCPWHKYKITLATGE 93
>pdb|1DJQ|A Chain A, Structural And Biochemical Characterization Of Recombinant
C30a Mutant Of Trimethylamine Dehydrogenase From
Methylophilus Methylotrophus (Sp. W3a1)
pdb|1DJQ|B Chain B, Structural And Biochemical Characterization Of Recombinant
C30a Mutant Of Trimethylamine Dehydrogenase From
Methylophilus Methylotrophus (Sp. W3a1)
Length = 729
Score = 33.5 bits (75), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 18/156 (11%)
Query: 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLR 101
NKD+ ++VG GPSG+ L ++G+T L + K+ L+ A L
Sbjct: 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAE---------KIGGHLNQVAALPGLG 438
Query: 102 TEEFYKD-NDIHVIKGKKIISDSE--LNEKKIKLQDGTSIDFTKIYLATGSSPRTISQAD 158
+++D + + K K +S+ L +K + D K+ +ATG+ T D
Sbjct: 439 EWSYHRDYRETQITKLLKKNKESQLALGQKPMTADDVLQYGADKVIIATGARWNT----D 494
Query: 159 GVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIG 194
G N + + ++ +TPE V+ G IG
Sbjct: 495 GTNCLTHDPIPGADASLPDQLTPEQ--VMDGKKKIG 528
Score = 33.5 bits (75), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 18/156 (11%)
Query: 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLR 653
NKD+ ++VG GPSG+ L ++G+T L + K+ L+ A L
Sbjct: 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAE---------KIGGHLNQVAALPGLG 438
Query: 654 TEEFYKD-NDIHVIKGKKIISDSE--LNEKKIKLQDGTSIDFTKIYLATGSSPRTISQAD 710
+++D + + K K +S+ L +K + D K+ +ATG+ T D
Sbjct: 439 EWSYHRDYRETQITKLLKKNKESQLALGQKPMTADDVLQYGADKVIIATGARWNT----D 494
Query: 711 GVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIG 746
G N + + ++ +TPE V+ G IG
Sbjct: 495 GTNCLTHDPIPGADASLPDQLTPEQ--VMDGKKKIG 528
Score = 33.5 bits (75), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 18/156 (11%)
Query: 1065 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLR 1124
NKD+ ++VG GPSG+ L ++G+T L + K+ L+ A L
Sbjct: 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAE---------KIGGHLNQVAALPGLG 438
Query: 1125 TEEFYKD-NDIHVIKGKKIISDSE--LNEKKIKLQDGTSIDFTKIYLATGSSPRTISQAD 1181
+++D + + K K +S+ L +K + D K+ +ATG+ T D
Sbjct: 439 EWSYHRDYRETQITKLLKKNKESQLALGQKPMTADDVLQYGADKVIIATGARWNT----D 494
Query: 1182 GVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIG 1217
G N + + ++ +TPE V+ G IG
Sbjct: 495 GTNCLTHDPIPGADASLPDQLTPEQ--VMDGKKKIG 528
>pdb|3NT6|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C43sC531S DOUBLE MUTANT
pdb|3NT6|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C43sC531S DOUBLE MUTANT
Length = 574
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 23/210 (10%)
Query: 131 KLQDGTSID--FTKIYLATGSSPRTISQADGVNK--VFYLRTVEDANNIAPHITPES--N 184
+L DG+ + + L+ G++P + GV+ LR + D + I I + +
Sbjct: 95 RLLDGSEYQESYDTLLLSPGAAP-IVPPIPGVDNPLTHSLRNIPDXDRILQTIQXNNVEH 153
Query: 185 VVVIGSSFIGMEAA-AFCASKVKSV---------TVVGRGAVPFQESLGKEVGERITKLF 234
V+G FIG+E + +K+ T V R F ++ G +
Sbjct: 154 ATVVGGGFIGLEXXESLHHLGIKTTLLELADQVXTPVDREXAGFAHQAIRDQGVDLRLGT 213
Query: 235 ESKGVKFVMKANVSSFEKNEKNDVT------AANLDNGTTIPADLVIVGIGTVLNTNYLD 288
V + ++ +V+S E + L NG + DL+I IG T
Sbjct: 214 ALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIXAIGVRPETQLAR 273
Query: 289 GKGVELNGQKAVVVNEYLETNVPGVYAGGD 318
G+ + + VN +T+ P +YA GD
Sbjct: 274 DAGLAIGELGGIKVNAXXQTSDPAIYAVGD 303
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 23/210 (10%)
Query: 683 KLQDGTSID--FTKIYLATGSSPRTISQADGVNK--VFYLRTVEDANNIAPHITPES--N 736
+L DG+ + + L+ G++P + GV+ LR + D + I I + +
Sbjct: 95 RLLDGSEYQESYDTLLLSPGAAP-IVPPIPGVDNPLTHSLRNIPDXDRILQTIQXNNVEH 153
Query: 737 VVVIGSSFIGMEAA-AFCASKVKSV---------TVVGRGAVPFQESLGKEVGERITKLF 786
V+G FIG+E + +K+ T V R F ++ G +
Sbjct: 154 ATVVGGGFIGLEXXESLHHLGIKTTLLELADQVXTPVDREXAGFAHQAIRDQGVDLRLGT 213
Query: 787 ESKGVKFVMKANVSSFEKNEKNDVT------AANLDNGTTIPADLVIVGIGTVLNTNYLD 840
V + ++ +V+S E + L NG + DL+I IG T
Sbjct: 214 ALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIXAIGVRPETQLAR 273
Query: 841 GKGVELNGQKAVVVNEYLETNVPGVYAGGD 870
G+ + + VN +T+ P +YA GD
Sbjct: 274 DAGLAIGELGGIKVNAXXQTSDPAIYAVGD 303
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 23/210 (10%)
Query: 1154 KLQDGTSID--FTKIYLATGSSPRTISQADGVNK--VFYLRTVEDANNIAPHITPES--N 1207
+L DG+ + + L+ G++P + GV+ LR + D + I I + +
Sbjct: 95 RLLDGSEYQESYDTLLLSPGAAP-IVPPIPGVDNPLTHSLRNIPDXDRILQTIQXNNVEH 153
Query: 1208 VVVIGSSFIGMEAA-AFCASKVKSV---------TVVGRGAVPFQESLGKEVGERITKLF 1257
V+G FIG+E + +K+ T V R F ++ G +
Sbjct: 154 ATVVGGGFIGLEXXESLHHLGIKTTLLELADQVXTPVDREXAGFAHQAIRDQGVDLRLGT 213
Query: 1258 ESKGVKFVMKANVSSFEKNEKNDVT------AANLDNGTTIPADLVIVGIGTVLNTNYLD 1311
V + ++ +V+S E + L NG + DL+I IG T
Sbjct: 214 ALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIXAIGVRPETQLAR 273
Query: 1312 GKGVELNGQKAVVVNEYLETNVPGVYAGGD 1341
G+ + + VN +T+ P +YA GD
Sbjct: 274 DAGLAIGELGGIKVNAXXQTSDPAIYAVGD 303
>pdb|3NTA|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase
pdb|3NTA|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase
Length = 574
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 23/210 (10%)
Query: 131 KLQDGTSID--FTKIYLATGSSPRTISQADGVNK--VFYLRTVEDANNIAPHITPES--N 184
+L DG+ + + L+ G++P + GV+ LR + D + I I + +
Sbjct: 95 RLLDGSEYQESYDTLLLSPGAAP-IVPPIPGVDNPLTHSLRNIPDXDRILQTIQXNNVEH 153
Query: 185 VVVIGSSFIGMEAA-AFCASKVKSV---------TVVGRGAVPFQESLGKEVGERITKLF 234
V+G FIG+E + +K+ T V R F ++ G +
Sbjct: 154 ATVVGGGFIGLEXXESLHHLGIKTTLLELADQVXTPVDREXAGFAHQAIRDQGVDLRLGT 213
Query: 235 ESKGVKFVMKANVSSFEKNEKNDVT------AANLDNGTTIPADLVIVGIGTVLNTNYLD 288
V + ++ +V+S E + L NG + DL+I IG T
Sbjct: 214 ALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIXAIGVRPETQLAR 273
Query: 289 GKGVELNGQKAVVVNEYLETNVPGVYAGGD 318
G+ + + VN +T+ P +YA GD
Sbjct: 274 DAGLAIGELGGIKVNAXXQTSDPAIYAVGD 303
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 23/210 (10%)
Query: 683 KLQDGTSID--FTKIYLATGSSPRTISQADGVNK--VFYLRTVEDANNIAPHITPES--N 736
+L DG+ + + L+ G++P + GV+ LR + D + I I + +
Sbjct: 95 RLLDGSEYQESYDTLLLSPGAAP-IVPPIPGVDNPLTHSLRNIPDXDRILQTIQXNNVEH 153
Query: 737 VVVIGSSFIGMEAA-AFCASKVKSV---------TVVGRGAVPFQESLGKEVGERITKLF 786
V+G FIG+E + +K+ T V R F ++ G +
Sbjct: 154 ATVVGGGFIGLEXXESLHHLGIKTTLLELADQVXTPVDREXAGFAHQAIRDQGVDLRLGT 213
Query: 787 ESKGVKFVMKANVSSFEKNEKNDVT------AANLDNGTTIPADLVIVGIGTVLNTNYLD 840
V + ++ +V+S E + L NG + DL+I IG T
Sbjct: 214 ALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIXAIGVRPETQLAR 273
Query: 841 GKGVELNGQKAVVVNEYLETNVPGVYAGGD 870
G+ + + VN +T+ P +YA GD
Sbjct: 274 DAGLAIGELGGIKVNAXXQTSDPAIYAVGD 303
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 23/210 (10%)
Query: 1154 KLQDGTSID--FTKIYLATGSSPRTISQADGVNK--VFYLRTVEDANNIAPHITPES--N 1207
+L DG+ + + L+ G++P + GV+ LR + D + I I + +
Sbjct: 95 RLLDGSEYQESYDTLLLSPGAAP-IVPPIPGVDNPLTHSLRNIPDXDRILQTIQXNNVEH 153
Query: 1208 VVVIGSSFIGMEAA-AFCASKVKSV---------TVVGRGAVPFQESLGKEVGERITKLF 1257
V+G FIG+E + +K+ T V R F ++ G +
Sbjct: 154 ATVVGGGFIGLEXXESLHHLGIKTTLLELADQVXTPVDREXAGFAHQAIRDQGVDLRLGT 213
Query: 1258 ESKGVKFVMKANVSSFEKNEKNDVT------AANLDNGTTIPADLVIVGIGTVLNTNYLD 1311
V + ++ +V+S E + L NG + DL+I IG T
Sbjct: 214 ALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIXAIGVRPETQLAR 273
Query: 1312 GKGVELNGQKAVVVNEYLETNVPGVYAGGD 1341
G+ + + VN +T+ P +YA GD
Sbjct: 274 DAGLAIGELGGIKVNAXXQTSDPAIYAVGD 303
>pdb|1OJT|A Chain A, Structure Of Dihydrolipoamide Dehydrogenase
Length = 482
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 272 DLVIVGIGTVLNTNYLDGK--GVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYN 329
D V+V G N + + GV + + + V++ + TNVP +YA GDI P+ +
Sbjct: 276 DAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPM--LAH 333
Query: 330 KNASIGH 336
K GH
Sbjct: 334 KAVHEGH 340
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 824 DLVIVGIGTVLNTNYLDGK--GVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYN 881
D V+V G N + + GV + + + V++ + TNVP +YA GDI P+ +
Sbjct: 276 DAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPM--LAH 333
Query: 882 KNASIGH 888
K GH
Sbjct: 334 KAVHEGH 340
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 1295 DLVIVGIGTVLNTNYLDGK--GVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYN 1352
D V+V G N + + GV + + + V++ + TNVP +YA GDI P+ +
Sbjct: 276 DAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPM--LAH 333
Query: 1353 KNASIGH 1359
K GH
Sbjct: 334 KAVHEGH 340
>pdb|1BHY|A Chain A, Low Temperature Middle Resolution Structure Of P64k From
Masc Data
Length = 482
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 272 DLVIVGIGTVLNTNYLDGK--GVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYN 329
D V+V G N + + GV + + + V++ + TNVP +YA GDI P+ +
Sbjct: 276 DAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPM--LAH 333
Query: 330 KNASIGH 336
K GH
Sbjct: 334 KAVHEGH 340
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 824 DLVIVGIGTVLNTNYLDGK--GVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYN 881
D V+V G N + + GV + + + V++ + TNVP +YA GDI P+ +
Sbjct: 276 DAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPM--LAH 333
Query: 882 KNASIGH 888
K GH
Sbjct: 334 KAVHEGH 340
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 1295 DLVIVGIGTVLNTNYLDGK--GVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYN 1352
D V+V G N + + GV + + + V++ + TNVP +YA GDI P+ +
Sbjct: 276 DAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPM--LAH 333
Query: 1353 KNASIGH 1359
K GH
Sbjct: 334 KAVHEGH 340
>pdb|1VDC|A Chain A, Structure Of Nadph Dependent Thioredoxin Reductase
Length = 333
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 271 ADLVIVG----IGTVLNTNYLDGKGVELNGQKAVVVNE-YLETNVPGVYAGGDI 319
+DL + G IG T +LDG GVEL+ VV +T+VPGV+A GD+
Sbjct: 244 SDLKVSGLFFAIGHEPATKFLDG-GVELDSDGYVVTKPGTTQTSVPGVFAAGDV 296
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 823 ADLVIVG----IGTVLNTNYLDGKGVELNGQKAVVVNE-YLETNVPGVYAGGDI 871
+DL + G IG T +LDG GVEL+ VV +T+VPGV+A GD+
Sbjct: 244 SDLKVSGLFFAIGHEPATKFLDG-GVELDSDGYVVTKPGTTQTSVPGVFAAGDV 296
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 1294 ADLVIVG----IGTVLNTNYLDGKGVELNGQKAVVVNE-YLETNVPGVYAGGDI 1342
+DL + G IG T +LDG GVEL+ VV +T+VPGV+A GD+
Sbjct: 244 SDLKVSGLFFAIGHEPATKFLDG-GVELDSDGYVVTKPGTTQTSVPGVFAAGDV 296
>pdb|2A87|A Chain A, Crystal Structure Of M. Tuberculosis Thioredoxin Reductase
pdb|2A87|B Chain B, Crystal Structure Of M. Tuberculosis Thioredoxin Reductase
Length = 335
Score = 31.6 bits (70), Expect = 3.1, Method: Composition-based stats.
Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 13/196 (6%)
Query: 128 KKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVV 187
K + DG + + LA G++ R + Q G ++ R V + ++ V
Sbjct: 103 KSVVTADGQTHRARAVILAMGAAARYL-QVPGEQELLG-RGVSSCATCDGFFFRDQDIAV 160
Query: 188 IGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANV 247
IG ME A F +SVT+V R E ++ + + + ++F+ V
Sbjct: 161 IGGGDSAMEEATFLTRFARSVTLVHRR----DEFRASKI--MLDRARNNDKIRFLTNHTV 214
Query: 248 SSFEKNEKND---VTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVN- 303
+ + + V N TT+P V V IG + L + ++++ V+V
Sbjct: 215 VAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSG-LVREAIDVDPDGYVLVQG 273
Query: 304 EYLETNVPGVYAGGDI 319
T++PGV+A GD+
Sbjct: 274 RTTSTSLPGVFAAGDL 289
Score = 31.6 bits (70), Expect = 3.1, Method: Composition-based stats.
Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 13/196 (6%)
Query: 680 KKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVV 739
K + DG + + LA G++ R + Q G ++ R V + ++ V
Sbjct: 103 KSVVTADGQTHRARAVILAMGAAARYL-QVPGEQELLG-RGVSSCATCDGFFFRDQDIAV 160
Query: 740 IGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANV 799
IG ME A F +SVT+V R E ++ + + + ++F+ V
Sbjct: 161 IGGGDSAMEEATFLTRFARSVTLVHRR----DEFRASKI--MLDRARNNDKIRFLTNHTV 214
Query: 800 SSFEKNEKND---VTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVN- 855
+ + + V N TT+P V V IG + L + ++++ V+V
Sbjct: 215 VAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSG-LVREAIDVDPDGYVLVQG 273
Query: 856 EYLETNVPGVYAGGDI 871
T++PGV+A GD+
Sbjct: 274 RTTSTSLPGVFAAGDL 289
Score = 31.6 bits (70), Expect = 3.1, Method: Composition-based stats.
Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 13/196 (6%)
Query: 1151 KKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVV 1210
K + DG + + LA G++ R + Q G ++ R V + ++ V
Sbjct: 103 KSVVTADGQTHRARAVILAMGAAARYL-QVPGEQELLG-RGVSSCATCDGFFFRDQDIAV 160
Query: 1211 IGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANV 1270
IG ME A F +SVT+V R E ++ + + + ++F+ V
Sbjct: 161 IGGGDSAMEEATFLTRFARSVTLVHRR----DEFRASKI--MLDRARNNDKIRFLTNHTV 214
Query: 1271 SSFEKNEKND---VTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVN- 1326
+ + + V N TT+P V V IG + L + ++++ V+V
Sbjct: 215 VAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSG-LVREAIDVDPDGYVLVQG 273
Query: 1327 EYLETNVPGVYAGGDI 1342
T++PGV+A GD+
Sbjct: 274 RTTSTSLPGVFAAGDL 289
>pdb|3GCE|A Chain A, Ferredoxin Of Carbazole 1,9a-Dioxygenase From Nocardioides
Aromaticivorans Ic177
Length = 121
Score = 30.4 bits (67), Expect = 7.3, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 506 NIYAVGTKCSHYGAPLVKGSLGDG--RVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTI 563
++YA+ CSH A L G + CP H F++ TG P + + Y V +
Sbjct: 43 SVYAISNLCSHAEAYLDMGVFHAESLEIECPLHVGRFDVRTGAPTALPCVLPVRAYDVVV 102
Query: 564 QNDDSVVVQARKD 576
+ +V D
Sbjct: 103 DGTEILVAPKEAD 115
Score = 30.4 bits (67), Expect = 7.3, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 977 NIYAVGTKCSHYGAPLVKGSLGDG--RVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTI 1034
++YA+ CSH A L G + CP H F++ TG P + + Y V +
Sbjct: 43 SVYAISNLCSHAEAYLDMGVFHAESLEIECPLHVGRFDVRTGAPTALPCVLPVRAYDVVV 102
Query: 1035 QNDDSVVVQARKD 1047
+ +V D
Sbjct: 103 DGTEILVAPKEAD 115
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,641,546
Number of Sequences: 62578
Number of extensions: 1954729
Number of successful extensions: 7493
Number of sequences better than 100.0: 141
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 6705
Number of HSP's gapped (non-prelim): 494
length of query: 1466
length of database: 14,973,337
effective HSP length: 111
effective length of query: 1355
effective length of database: 8,027,179
effective search space: 10876827545
effective search space used: 10876827545
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)