Query psy2951
Match_columns 1466
No_of_seqs 1373 out of 10171
Neff 9.7
Searched_HMMs 29240
Date Fri Aug 16 21:47:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2951.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2951hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lxd_A FAD-dependent pyridine 100.0 1.7E-57 5.7E-62 550.9 42.2 395 1065-1464 8-408 (415)
2 3fg2_P Putative rubredoxin red 100.0 6.9E-57 2.4E-61 542.9 43.2 391 1067-1464 2-397 (404)
3 3ef6_A Toluene 1,2-dioxygenase 100.0 1.2E-56 4E-61 540.9 41.6 389 1067-1464 3-396 (410)
4 1q1r_A Putidaredoxin reductase 100.0 9.8E-52 3.4E-56 500.4 44.0 393 1066-1464 4-406 (431)
5 3klj_A NAD(FAD)-dependent dehy 100.0 1.4E-52 4.7E-57 497.3 32.0 365 1063-1456 6-374 (385)
6 2gqw_A Ferredoxin reductase; f 100.0 1.7E-50 5.9E-55 486.2 43.6 384 1066-1464 7-397 (408)
7 1m6i_A Programmed cell death p 100.0 1.2E-49 4.1E-54 489.9 31.7 384 1065-1455 10-479 (493)
8 3lxd_A FAD-dependent pyridine 100.0 3.9E-45 1.3E-49 442.5 41.5 375 594-973 8-388 (415)
9 3ef6_A Toluene 1,2-dioxygenase 100.0 7.1E-45 2.4E-49 438.1 40.3 370 595-973 2-376 (410)
10 3fg2_P Putative rubredoxin red 100.0 1.4E-44 4.7E-49 435.6 40.8 372 595-973 1-377 (404)
11 1xhc_A NADH oxidase /nitrite r 100.0 1.2E-44 4.3E-49 427.7 30.0 354 1066-1450 8-364 (367)
12 3klj_A NAD(FAD)-dependent dehy 100.0 7.8E-44 2.7E-48 422.3 29.5 351 592-971 6-360 (385)
13 1q1r_A Putidaredoxin reductase 100.0 2.1E-42 7.3E-47 418.6 42.1 371 595-970 4-383 (431)
14 2gqw_A Ferredoxin reductase; f 100.0 6E-42 2E-46 411.9 40.3 362 594-970 6-374 (408)
15 4eqs_A Coenzyme A disulfide re 100.0 4.9E-42 1.7E-46 415.2 35.5 383 1067-1462 1-414 (437)
16 3iwa_A FAD-dependent pyridine 100.0 1.8E-41 6E-46 417.5 37.3 390 1066-1462 3-435 (472)
17 2cdu_A NADPH oxidase; flavoenz 100.0 4.6E-41 1.6E-45 411.3 36.2 385 1067-1459 1-418 (452)
18 2v3a_A Rubredoxin reductase; a 100.0 8.6E-41 2.9E-45 399.9 35.7 355 1066-1438 4-368 (384)
19 2bc0_A NADH oxidase; flavoprot 100.0 1.5E-40 5.1E-45 410.0 38.6 385 1066-1459 35-463 (490)
20 3kd9_A Coenzyme A disulfide re 100.0 1.2E-40 4E-45 407.4 36.6 387 1066-1461 3-417 (449)
21 4eqs_A Coenzyme A disulfide re 100.0 7.9E-41 2.7E-45 404.7 33.9 361 596-967 1-389 (437)
22 3oc4_A Oxidoreductase, pyridin 100.0 2.6E-40 9E-45 404.2 37.4 385 1067-1460 3-414 (452)
23 3cgb_A Pyridine nucleotide-dis 100.0 4.3E-40 1.5E-44 404.8 38.4 387 1066-1461 36-456 (480)
24 3ntd_A FAD-dependent pyridine 100.0 4E-40 1.4E-44 416.4 37.2 391 1066-1463 1-443 (565)
25 1nhp_A NADH peroxidase; oxidor 100.0 5E-40 1.7E-44 401.5 35.1 384 1068-1460 2-418 (447)
26 1xhc_A NADH oxidase /nitrite r 100.0 1.9E-40 6.6E-45 391.8 30.0 346 595-971 8-356 (367)
27 1m6i_A Programmed cell death p 100.0 3.7E-39 1.3E-43 396.5 31.4 383 42-431 10-477 (493)
28 3oc4_A Oxidoreductase, pyridin 100.0 1.9E-38 6.6E-43 387.7 35.7 364 596-966 3-390 (452)
29 3kd9_A Coenzyme A disulfide re 100.0 2E-38 6.9E-43 387.5 35.2 366 595-967 3-394 (449)
30 2cdu_A NADPH oxidase; flavoenz 100.0 2E-38 7E-43 387.9 34.3 365 596-966 1-395 (452)
31 3iwa_A FAD-dependent pyridine 100.0 3.2E-38 1.1E-42 388.4 36.2 367 595-966 3-407 (472)
32 2bc0_A NADH oxidase; flavoprot 100.0 4.4E-38 1.5E-42 387.9 34.7 365 595-966 35-440 (490)
33 3ics_A Coenzyme A-disulfide re 100.0 9.5E-38 3.3E-42 395.1 37.8 388 1065-1462 35-458 (588)
34 3ntd_A FAD-dependent pyridine 100.0 1.7E-37 5.9E-42 392.3 37.3 369 595-968 1-418 (565)
35 3cgb_A Pyridine nucleotide-dis 100.0 2.8E-37 9.4E-42 379.8 37.0 366 595-967 36-432 (480)
36 1nhp_A NADH peroxidase; oxidor 100.0 4.9E-37 1.7E-41 375.0 37.3 365 596-967 1-395 (447)
37 2v3a_A Rubredoxin reductase; a 100.0 4.1E-37 1.4E-41 368.0 35.7 357 595-968 4-369 (384)
38 3ics_A Coenzyme A-disulfide re 100.0 7.5E-37 2.6E-41 386.9 37.5 369 591-967 32-433 (588)
39 1ojt_A Surface protein; redox- 100.0 7.3E-37 2.5E-41 376.6 28.1 387 43-456 6-477 (482)
40 4b1b_A TRXR, thioredoxin reduc 100.0 1E-36 3.5E-41 372.6 27.1 379 43-444 42-517 (542)
41 2eq6_A Pyruvate dehydrogenase 100.0 7.6E-36 2.6E-40 365.3 32.8 383 43-456 6-461 (464)
42 2hqm_A GR, grase, glutathione 100.0 8.1E-36 2.8E-40 366.6 33.2 380 42-444 10-467 (479)
43 3dk9_A Grase, GR, glutathione 100.0 5.2E-36 1.8E-40 369.3 31.4 380 39-444 16-474 (478)
44 2qae_A Lipoamide, dihydrolipoy 100.0 5.5E-36 1.9E-40 368.1 29.7 376 43-444 2-454 (468)
45 1zk7_A HGII, reductase, mercur 100.0 4.2E-35 1.4E-39 360.1 37.1 366 1066-1462 4-437 (467)
46 2a8x_A Dihydrolipoyl dehydroge 100.0 6.2E-36 2.1E-40 367.2 29.4 374 43-444 3-450 (464)
47 1zmd_A Dihydrolipoyl dehydroge 100.0 7.8E-36 2.7E-40 367.4 30.0 367 1066-1459 6-445 (474)
48 3urh_A Dihydrolipoyl dehydroge 100.0 8.4E-36 2.9E-40 368.5 30.3 378 42-444 24-477 (491)
49 1ebd_A E3BD, dihydrolipoamide 100.0 2.2E-35 7.6E-40 361.3 33.1 374 43-444 3-447 (455)
50 1v59_A Dihydrolipoamide dehydr 100.0 1.4E-35 4.7E-40 365.9 30.9 378 43-444 5-464 (478)
51 1zmd_A Dihydrolipoyl dehydroge 100.0 1.4E-35 4.9E-40 365.0 30.9 378 43-444 6-459 (474)
52 1dxl_A Dihydrolipoamide dehydr 100.0 1.6E-35 5.3E-40 364.9 30.8 377 42-444 5-456 (470)
53 3lad_A Dihydrolipoamide dehydr 100.0 1.9E-35 6.5E-40 364.5 31.3 391 42-457 2-472 (476)
54 1fec_A Trypanothione reductase 100.0 3.3E-35 1.1E-39 361.4 33.3 376 42-444 2-467 (490)
55 2qae_A Lipoamide, dihydrolipoy 100.0 1.7E-35 5.9E-40 363.7 30.2 367 1066-1461 2-442 (468)
56 2wpf_A Trypanothione reductase 100.0 2E-35 6.9E-40 363.4 30.6 375 43-444 7-471 (495)
57 1ges_A Glutathione reductase; 100.0 2.4E-35 8.2E-40 359.4 30.8 370 43-444 4-446 (450)
58 1ebd_A E3BD, dihydrolipoamide 100.0 2.5E-35 8.7E-40 360.8 30.6 366 1066-1460 3-434 (455)
59 2r9z_A Glutathione amide reduc 100.0 6.2E-35 2.1E-39 356.7 33.1 370 42-444 3-444 (463)
60 1mo9_A ORF3; nucleotide bindin 100.0 1.8E-34 6E-39 358.1 37.3 369 1065-1461 42-496 (523)
61 1v59_A Dihydrolipoamide dehydr 100.0 8.3E-36 2.8E-40 367.9 25.1 366 1066-1460 5-451 (478)
62 4dna_A Probable glutathione re 100.0 8E-35 2.7E-39 356.9 33.1 373 42-444 4-446 (463)
63 1xdi_A RV3303C-LPDA; reductase 100.0 4.3E-35 1.5E-39 362.6 30.8 361 1067-1459 3-443 (499)
64 2hqm_A GR, grase, glutathione 100.0 3.6E-35 1.2E-39 360.8 29.9 348 594-967 10-432 (479)
65 1onf_A GR, grase, glutathione 100.0 1E-34 3.6E-39 358.4 34.0 382 43-444 2-492 (500)
66 1mo9_A ORF3; nucleotide bindin 100.0 2.6E-34 8.9E-39 356.6 37.2 376 41-444 41-510 (523)
67 1dxl_A Dihydrolipoamide dehydr 100.0 4.7E-35 1.6E-39 360.7 29.5 367 1065-1460 5-443 (470)
68 1zk7_A HGII, reductase, mercur 100.0 3.1E-34 1.1E-38 352.4 36.6 376 42-444 3-448 (467)
69 1lvl_A Dihydrolipoamide dehydr 100.0 9.1E-35 3.1E-39 355.1 30.9 369 42-444 4-444 (458)
70 2a8x_A Dihydrolipoyl dehydroge 100.0 4.9E-35 1.7E-39 359.2 28.3 363 1067-1460 4-437 (464)
71 3l8k_A Dihydrolipoyl dehydroge 100.0 2.6E-35 8.8E-40 361.2 25.2 375 43-444 4-450 (466)
72 3dgh_A TRXR-1, thioredoxin red 100.0 1.4E-34 4.7E-39 356.8 31.8 379 41-444 7-471 (483)
73 3o0h_A Glutathione reductase; 100.0 4.9E-35 1.7E-39 360.6 26.8 373 42-444 25-466 (484)
74 3qfa_A Thioredoxin reductase 1 100.0 2.3E-34 7.8E-39 356.3 32.4 381 41-444 30-499 (519)
75 1ojt_A Surface protein; redox- 100.0 5.9E-35 2E-39 359.6 26.3 364 1066-1461 6-451 (482)
76 1ges_A Glutathione reductase; 100.0 8.8E-35 3E-39 354.3 27.1 364 1066-1461 4-434 (450)
77 2wpf_A Trypanothione reductase 100.0 1.8E-34 6.2E-39 354.9 29.4 364 1066-1459 7-457 (495)
78 2eq6_A Pyruvate dehydrogenase 100.0 3.8E-34 1.3E-38 350.2 31.9 358 1066-1459 6-433 (464)
79 1xdi_A RV3303C-LPDA; reductase 100.0 6.4E-34 2.2E-38 352.0 33.3 346 595-968 2-423 (499)
80 3dgz_A Thioredoxin reductase 2 100.0 4E-34 1.4E-38 352.8 31.2 380 42-444 5-471 (488)
81 1fec_A Trypanothione reductase 100.0 6.3E-34 2.2E-38 350.1 32.6 364 1066-1459 3-453 (490)
82 3ic9_A Dihydrolipoamide dehydr 100.0 1.3E-34 4.5E-39 356.4 26.3 371 43-444 8-459 (492)
83 3dk9_A Grase, GR, glutathione 100.0 5.8E-34 2E-38 351.1 31.6 347 594-967 19-439 (478)
84 4g6h_A Rotenone-insensitive NA 100.0 4.1E-35 1.4E-39 358.9 21.0 295 1064-1376 40-398 (502)
85 1onf_A GR, grase, glutathione 100.0 5.9E-34 2E-38 351.7 31.2 372 1067-1460 3-479 (500)
86 2yqu_A 2-oxoglutarate dehydrog 100.0 3.2E-34 1.1E-38 351.1 28.0 373 44-444 2-441 (455)
87 2r9z_A Glutathione amide reduc 100.0 7.8E-34 2.7E-38 347.0 31.1 361 1066-1459 4-430 (463)
88 3l8k_A Dihydrolipoyl dehydroge 100.0 1.3E-33 4.5E-38 346.0 29.4 367 1066-1461 4-438 (466)
89 1lvl_A Dihydrolipoamide dehydr 100.0 2.7E-33 9.4E-38 342.0 31.9 358 1066-1459 5-430 (458)
90 3lad_A Dihydrolipoamide dehydr 100.0 2.4E-33 8.2E-38 345.7 31.6 347 594-967 2-422 (476)
91 4g6h_A Rotenone-insensitive NA 100.0 3.5E-34 1.2E-38 350.7 23.9 297 591-905 38-398 (502)
92 3urh_A Dihydrolipoyl dehydroge 100.0 2E-33 6.9E-38 347.2 30.9 346 595-967 25-442 (491)
93 2yqu_A 2-oxoglutarate dehydrog 100.0 1.1E-33 3.9E-38 346.1 27.9 361 1067-1459 2-427 (455)
94 4dna_A Probable glutathione re 100.0 3.4E-33 1.2E-37 342.4 30.2 343 595-967 5-411 (463)
95 3qfa_A Thioredoxin reductase 1 100.0 4.2E-33 1.4E-37 345.0 28.5 351 593-967 30-464 (519)
96 4b1b_A TRXR, thioredoxin reduc 100.0 5E-33 1.7E-37 340.0 27.0 347 595-968 42-483 (542)
97 3dgh_A TRXR-1, thioredoxin red 100.0 9.5E-33 3.3E-37 340.4 29.6 347 593-967 7-436 (483)
98 3dgz_A Thioredoxin reductase 2 100.0 2E-32 6.9E-37 337.6 30.2 348 594-967 5-436 (488)
99 3o0h_A Glutathione reductase; 100.0 2E-32 6.7E-37 337.3 29.1 343 595-967 26-431 (484)
100 2x8g_A Thioredoxin glutathione 100.0 5.4E-32 1.8E-36 342.8 33.7 380 41-444 105-578 (598)
101 3ic9_A Dihydrolipoamide dehydr 100.0 6.7E-32 2.3E-36 332.2 29.9 341 595-967 8-424 (492)
102 2x8g_A Thioredoxin glutathione 100.0 2.6E-31 9E-36 336.5 29.4 350 593-967 105-543 (598)
103 3hyw_A Sulfide-quinone reducta 100.0 3.7E-32 1.3E-36 329.1 20.6 298 1067-1376 3-330 (430)
104 3ab1_A Ferredoxin--NADP reduct 100.0 2.1E-31 7.1E-36 316.8 24.2 300 1066-1393 14-343 (360)
105 2zbw_A Thioredoxin reductase; 100.0 3E-31 1E-35 312.5 24.9 296 1066-1390 5-328 (335)
106 4fk1_A Putative thioredoxin re 100.0 9.4E-32 3.2E-36 311.0 20.1 285 594-904 5-296 (304)
107 2zbw_A Thioredoxin reductase; 100.0 2.9E-31 9.9E-36 312.6 24.0 294 595-913 5-322 (335)
108 4gcm_A TRXR, thioredoxin reduc 100.0 2.6E-31 8.8E-36 309.1 22.9 283 594-905 5-303 (312)
109 4a5l_A Thioredoxin reductase; 100.0 5.9E-31 2E-35 306.9 25.1 287 594-904 3-308 (314)
110 3ab1_A Ferredoxin--NADP reduct 100.0 5.5E-31 1.9E-35 313.2 23.3 298 595-916 14-336 (360)
111 3hyw_A Sulfide-quinone reducta 100.0 2.5E-31 8.5E-36 321.8 19.6 302 596-906 3-331 (430)
112 3sx6_A Sulfide-quinone reducta 100.0 3.3E-31 1.1E-35 322.1 20.4 301 1066-1377 4-342 (437)
113 1fl2_A Alkyl hydroperoxide red 100.0 8.7E-31 3E-35 304.7 23.0 279 596-905 2-302 (310)
114 3lzw_A Ferredoxin--NADP reduct 100.0 8E-31 2.7E-35 308.8 21.8 298 1066-1393 7-330 (332)
115 3vrd_B FCCB subunit, flavocyto 100.0 2.4E-31 8.1E-36 321.0 17.6 292 1066-1376 2-321 (401)
116 3itj_A Thioredoxin reductase 1 100.0 6E-31 2.1E-35 310.7 19.9 288 590-905 17-332 (338)
117 3f8d_A Thioredoxin reductase ( 100.0 1.1E-30 3.7E-35 306.4 21.4 279 1066-1376 15-314 (323)
118 3fbs_A Oxidoreductase; structu 100.0 1.5E-30 5.2E-35 301.0 22.2 274 595-905 2-289 (297)
119 3f8d_A Thioredoxin reductase ( 100.0 8.4E-31 2.9E-35 307.3 20.0 282 595-905 15-314 (323)
120 2q7v_A Thioredoxin reductase; 100.0 1.9E-30 6.5E-35 303.9 22.9 280 594-905 7-309 (325)
121 2q0l_A TRXR, thioredoxin reduc 100.0 1.9E-30 6.6E-35 302.0 22.1 280 596-905 2-306 (311)
122 4gcm_A TRXR, thioredoxin reduc 100.0 1.4E-30 4.7E-35 303.0 20.8 292 42-353 5-303 (312)
123 2q0l_A TRXR, thioredoxin reduc 100.0 2.6E-30 9E-35 300.9 23.1 280 1067-1376 2-306 (311)
124 3fbs_A Oxidoreductase; structu 100.0 2.3E-30 8E-35 299.4 22.3 273 1066-1376 2-289 (297)
125 3cty_A Thioredoxin reductase; 100.0 2.5E-30 8.6E-35 301.9 22.6 281 594-905 15-313 (319)
126 3cty_A Thioredoxin reductase; 100.0 4.2E-30 1.4E-34 300.1 24.4 280 1066-1376 16-313 (319)
127 3lzw_A Ferredoxin--NADP reduct 100.0 1.7E-30 5.9E-35 305.9 21.3 283 595-906 7-313 (332)
128 1gte_A Dihydropyrimidine dehyd 100.0 1.9E-31 6.6E-36 353.9 14.6 308 1065-1401 186-540 (1025)
129 3h8l_A NADH oxidase; membrane 100.0 1.8E-30 6E-35 313.9 21.3 287 1066-1377 1-334 (409)
130 4a5l_A Thioredoxin reductase; 100.0 1.5E-30 5.1E-35 303.5 19.7 290 42-352 3-308 (314)
131 1fl2_A Alkyl hydroperoxide red 100.0 6.2E-30 2.1E-34 297.5 24.3 281 1067-1376 2-302 (310)
132 3sx6_A Sulfide-quinone reducta 100.0 1.9E-30 6.6E-35 315.4 20.9 305 595-908 4-344 (437)
133 3r9u_A Thioredoxin reductase; 100.0 5.1E-30 1.7E-34 299.4 23.6 283 594-905 3-309 (315)
134 3itj_A Thioredoxin reductase 1 100.0 2.7E-30 9.3E-35 305.1 21.2 283 1064-1376 20-332 (338)
135 2q7v_A Thioredoxin reductase; 100.0 7.1E-30 2.4E-34 299.0 24.4 280 1066-1376 8-309 (325)
136 1trb_A Thioredoxin reductase; 100.0 4E-30 1.4E-34 300.8 21.0 283 595-905 5-311 (320)
137 3vrd_B FCCB subunit, flavocyto 100.0 1.6E-30 5.5E-35 313.7 17.7 294 595-905 2-321 (401)
138 1gte_A Dihydropyrimidine dehyd 100.0 1.1E-31 3.7E-36 356.3 8.0 312 594-930 186-540 (1025)
139 1trb_A Thioredoxin reductase; 100.0 8.9E-30 3.1E-34 297.8 22.7 281 1066-1376 5-311 (320)
140 3h8l_A NADH oxidase; membrane 100.0 8.8E-30 3E-34 307.7 23.0 290 595-907 1-335 (409)
141 4fk1_A Putative thioredoxin re 100.0 6.3E-30 2.1E-34 295.6 20.1 280 1065-1375 5-296 (304)
142 1vdc_A NTR, NADPH dependent th 100.0 1.8E-29 6.2E-34 297.0 21.3 288 595-905 8-320 (333)
143 1hyu_A AHPF, alkyl hydroperoxi 100.0 2.2E-29 7.4E-34 311.4 22.4 283 592-905 209-513 (521)
144 3r9u_A Thioredoxin reductase; 100.0 2.6E-29 8.7E-34 293.5 21.7 283 1065-1376 3-309 (315)
145 2vdc_G Glutamate synthase [NAD 100.0 3.3E-30 1.1E-34 311.1 14.4 331 542-905 67-441 (456)
146 2a87_A TRXR, TR, thioredoxin r 100.0 2.1E-29 7.1E-34 296.1 20.7 281 593-905 12-313 (335)
147 1vdc_A NTR, NADPH dependent th 100.0 6.2E-29 2.1E-33 292.4 22.0 285 1066-1376 8-320 (333)
148 1hyu_A AHPF, alkyl hydroperoxi 100.0 2E-28 6.8E-33 302.8 25.1 284 1064-1376 210-513 (521)
149 2a87_A TRXR, TR, thioredoxin r 100.0 8.7E-29 3E-33 290.8 20.5 280 1064-1376 12-313 (335)
150 3h28_A Sulfide-quinone reducta 100.0 5.8E-29 2E-33 302.0 18.9 296 1067-1376 3-330 (430)
151 3d1c_A Flavin-containing putat 100.0 1.8E-28 6E-33 293.2 20.3 292 1066-1378 4-338 (369)
152 3h28_A Sulfide-quinone reducta 100.0 1.4E-28 4.6E-33 298.7 18.7 299 595-906 2-331 (430)
153 2vdc_G Glutamate synthase [NAD 100.0 4.4E-29 1.5E-33 301.2 14.2 278 1064-1376 120-441 (456)
154 4a9w_A Monooxygenase; baeyer-v 100.0 3E-28 1E-32 290.1 19.4 283 1066-1377 3-350 (357)
155 4a9w_A Monooxygenase; baeyer-v 100.0 6.2E-28 2.1E-32 287.4 22.1 283 595-906 3-350 (357)
156 3d1c_A Flavin-containing putat 100.0 6.3E-28 2.1E-32 288.4 21.7 291 595-907 4-338 (369)
157 3k30_A Histamine dehydrogenase 100.0 3.4E-29 1.2E-33 320.7 7.9 330 543-915 338-682 (690)
158 1cjc_A Protein (adrenodoxin re 100.0 4.5E-28 1.5E-32 293.6 17.1 288 594-906 5-393 (460)
159 1o94_A Tmadh, trimethylamine d 100.0 3E-29 1E-33 321.9 7.2 331 551-927 344-717 (729)
160 1cjc_A Protein (adrenodoxin re 99.9 4.5E-28 1.5E-32 293.6 14.4 287 1066-1377 6-393 (460)
161 2gag_A Heterotetrameric sarcos 99.9 2.4E-27 8.3E-32 312.2 19.5 278 595-905 128-441 (965)
162 2xve_A Flavin-containing monoo 99.9 1.9E-26 6.4E-31 281.1 23.7 271 596-907 3-340 (464)
163 2xve_A Flavin-containing monoo 99.9 1.2E-26 4.1E-31 282.8 21.9 270 1067-1379 3-341 (464)
164 1o94_A Tmadh, trimethylamine d 99.9 8E-28 2.7E-32 308.7 11.9 299 1064-1402 387-721 (729)
165 1lqt_A FPRA; NADP+ derivative, 99.9 6E-27 2.1E-31 283.3 15.3 283 595-906 3-385 (456)
166 1lqt_A FPRA; NADP+ derivative, 99.9 6E-27 2E-31 283.4 13.9 284 1066-1377 3-385 (456)
167 2gag_A Heterotetrameric sarcos 99.9 1.7E-26 5.7E-31 304.2 19.2 277 1066-1376 128-441 (965)
168 1y56_A Hypothetical protein PH 99.9 3.3E-26 1.1E-30 281.2 17.2 253 1066-1377 108-375 (493)
169 1ps9_A 2,4-dienoyl-COA reducta 99.9 2E-26 6.7E-31 294.6 14.3 260 590-903 368-671 (671)
170 3s5w_A L-ornithine 5-monooxyge 99.9 1.9E-25 6.4E-30 275.0 18.9 299 594-904 29-445 (463)
171 3s5w_A L-ornithine 5-monooxyge 99.9 1.1E-25 3.7E-30 277.2 16.2 298 1065-1374 29-444 (463)
172 2gv8_A Monooxygenase; FMO, FAD 99.9 4.8E-25 1.6E-29 269.0 20.3 273 594-907 5-361 (447)
173 3k30_A Histamine dehydrogenase 99.9 7E-26 2.4E-30 290.1 13.1 273 1064-1378 389-674 (690)
174 1y56_A Hypothetical protein PH 99.9 1.7E-25 5.9E-30 274.9 15.5 255 595-906 108-375 (493)
175 2gv8_A Monooxygenase; FMO, FAD 99.9 7.2E-25 2.5E-29 267.4 19.6 273 1066-1379 6-362 (447)
176 1ps9_A 2,4-dienoyl-COA reducta 99.9 1.1E-23 3.9E-28 269.0 20.2 256 1065-1374 372-671 (671)
177 3gwf_A Cyclohexanone monooxyge 99.9 6.1E-23 2.1E-27 253.2 16.0 282 595-904 8-453 (540)
178 3gwf_A Cyclohexanone monooxyge 99.9 1.2E-22 4E-27 250.7 16.7 282 1066-1375 8-453 (540)
179 3uox_A Otemo; baeyer-villiger 99.9 6.1E-22 2.1E-26 244.6 18.5 287 594-904 8-462 (545)
180 3uox_A Otemo; baeyer-villiger 99.9 2E-21 6.9E-26 239.9 17.5 288 1066-1375 9-462 (545)
181 4ap3_A Steroid monooxygenase; 99.9 3.6E-21 1.2E-25 238.0 19.5 168 594-769 20-226 (549)
182 4ap3_A Steroid monooxygenase; 99.8 3.9E-21 1.3E-25 237.6 16.9 166 1066-1240 21-226 (549)
183 1w4x_A Phenylacetone monooxyge 99.8 9.8E-21 3.4E-25 235.7 14.8 292 1066-1376 16-463 (542)
184 1w4x_A Phenylacetone monooxyge 99.8 2.9E-20 9.8E-25 231.5 17.6 285 594-905 15-463 (542)
185 2ywl_A Thioredoxin reductase r 99.8 1.2E-18 4.2E-23 183.6 13.3 154 1207-1377 3-169 (180)
186 2ywl_A Thioredoxin reductase r 99.8 1.9E-18 6.3E-23 182.2 14.5 154 736-906 3-169 (180)
187 4b63_A L-ornithine N5 monooxyg 99.7 8E-16 2.7E-20 188.8 26.1 282 590-871 34-457 (501)
188 4b63_A L-ornithine N5 monooxyg 99.7 1.6E-15 5.6E-20 186.1 24.6 279 40-318 36-456 (501)
189 3dqy_A Toluene 1,2-dioxygenase 99.6 3.4E-15 1.2E-19 139.9 11.0 77 493-570 22-98 (106)
190 2qpz_A Naphthalene 1,2-dioxyge 99.6 4.9E-15 1.7E-19 138.1 10.3 76 495-570 25-100 (103)
191 2i7f_A Ferredoxin component of 99.6 9.1E-15 3.1E-19 137.5 11.4 79 493-571 24-102 (108)
192 3gce_A Ferredoxin component of 99.6 5.8E-15 2E-19 141.3 9.1 77 495-571 32-110 (121)
193 2de6_D Ferredoxin component of 99.6 1.1E-14 3.8E-19 138.0 10.5 76 497-572 29-104 (115)
194 1fqt_A Rieske-type ferredoxin 99.5 1.2E-14 4E-19 137.7 9.8 76 495-570 27-103 (112)
195 1vm9_A Toluene-4-monooxygenase 99.5 1.9E-14 6.5E-19 136.1 10.4 76 495-571 24-100 (111)
196 4aiv_A Probable nitrite reduct 99.5 1.4E-14 4.9E-19 137.0 8.9 81 491-572 29-115 (119)
197 2e5v_A L-aspartate oxidase; ar 99.5 5.3E-15 1.8E-19 180.0 3.8 226 655-905 126-370 (472)
198 3c0d_A Putative nitrite reduct 99.5 3.5E-14 1.2E-18 135.5 7.4 75 496-571 28-108 (119)
199 2jo6_A Nitrite reductase [NAD( 99.5 8.9E-14 3.1E-18 131.9 9.6 74 496-570 29-109 (113)
200 2e5v_A L-aspartate oxidase; ar 99.5 7.3E-15 2.5E-19 178.8 1.6 222 1130-1377 130-371 (472)
201 4aay_B AROB; oxidoreductase, r 99.4 2.1E-13 7.3E-18 137.3 10.2 79 495-574 74-164 (175)
202 1rie_A Rieske iron-sulfur prot 99.4 1.2E-13 4.1E-18 133.2 6.7 66 504-570 62-128 (129)
203 3fpz_A Thiazole biosynthetic e 99.4 9.8E-16 3.4E-20 178.1 -9.6 259 592-905 62-322 (326)
204 1g8k_B Arsenite oxidase; molyb 99.4 8.4E-13 2.9E-17 128.0 11.3 79 495-574 31-122 (133)
205 2jza_A Nitrite reductase [NAD( 99.4 3.5E-13 1.2E-17 130.7 8.5 77 495-572 25-108 (130)
206 1rfs_A Rieske protein; iron-su 99.4 3.8E-13 1.3E-17 131.0 8.1 77 494-572 45-123 (139)
207 2cul_A Glucose-inhibited divis 99.4 1.7E-12 5.8E-17 142.2 13.8 157 1206-1376 4-229 (232)
208 3dqy_A Toluene 1,2-dioxygenase 99.4 4.2E-13 1.5E-17 125.6 6.0 73 974-1047 31-103 (106)
209 3d89_A Rieske domain-containin 99.3 1.3E-12 4.3E-17 131.7 8.8 78 495-572 38-133 (157)
210 3azc_A Cytochrome B6-F complex 99.0 9.3E-14 3.2E-18 132.7 0.0 76 494-571 39-117 (133)
211 2cul_A Glucose-inhibited divis 99.3 6E-12 2.1E-16 137.8 14.3 157 735-905 4-229 (232)
212 2qpz_A Naphthalene 1,2-dioxyge 99.3 1.1E-12 3.6E-17 122.3 6.3 70 974-1044 33-102 (103)
213 2i7f_A Ferredoxin component of 99.3 1.2E-12 4.1E-17 123.0 6.2 70 975-1045 35-104 (108)
214 2de6_D Ferredoxin component of 99.3 2.5E-12 8.6E-17 121.8 7.1 70 975-1045 36-105 (115)
215 3gce_A Ferredoxin component of 99.3 2E-12 6.9E-17 123.6 4.7 71 974-1045 40-112 (121)
216 1fqt_A Rieske-type ferredoxin 99.3 2.3E-12 7.9E-17 121.8 4.7 70 975-1045 36-106 (112)
217 2gqf_A Hypothetical protein HI 99.3 1.9E-12 6.6E-17 153.7 5.2 161 595-762 4-259 (401)
218 1vm9_A Toluene-4-monooxygenase 99.3 3.5E-12 1.2E-16 120.5 5.9 73 971-1045 30-102 (111)
219 4aiv_A Probable nitrite reduct 99.2 2.9E-12 9.8E-17 121.3 4.4 75 969-1044 36-115 (119)
220 2nwf_A Ubiquinol-cytochrome C 99.2 5.4E-12 1.9E-16 122.5 5.3 67 502-569 71-139 (141)
221 1nyk_A Rieske iron-sulfur prot 99.2 1.1E-11 3.7E-16 124.0 7.5 67 505-571 78-145 (165)
222 3c0d_A Putative nitrite reduct 99.2 5.2E-12 1.8E-16 120.5 4.5 73 971-1045 33-110 (119)
223 1pp9_E Ubiquinol-cytochrome C 99.2 9.8E-12 3.4E-16 127.8 6.0 65 504-569 129-194 (196)
224 2jo6_A Nitrite reductase [NAD( 99.2 1.4E-11 4.9E-16 116.7 5.9 72 971-1044 34-111 (113)
225 3fpz_A Thiazole biosynthetic e 99.2 1.7E-13 5.7E-18 159.3 -9.2 250 1065-1375 64-321 (326)
226 1jm1_A Rieske iron-sulfur prot 99.2 4.3E-11 1.5E-15 123.9 9.0 71 503-573 83-167 (204)
227 3gcf_A Terminal oxygenase comp 99.2 4.8E-11 1.7E-15 135.0 9.9 81 493-574 55-145 (394)
228 3gkq_A Terminal oxygenase comp 99.2 4.8E-11 1.7E-15 134.5 9.2 79 496-574 54-142 (389)
229 3gke_A DDMC; rieske cluster, n 99.1 3.1E-11 1.1E-15 139.2 7.9 81 493-574 28-115 (349)
230 2qjy_C Ubiquinol-cytochrome C 99.1 4.4E-11 1.5E-15 122.7 7.9 64 504-568 119-183 (187)
231 2gqf_A Hypothetical protein HI 99.1 2.8E-11 9.5E-16 143.7 6.5 160 1066-1233 4-259 (401)
232 1vf5_D Rieske iron-sulfur prot 99.1 4.5E-12 1.6E-16 130.0 -0.3 76 493-570 85-162 (179)
233 4aay_B AROB; oxidoreductase, r 99.1 7.9E-11 2.7E-15 118.7 8.1 81 962-1043 80-161 (175)
234 3cx5_E Cytochrome B-C1 complex 99.1 8.1E-11 2.8E-15 120.3 7.5 66 504-570 119-184 (185)
235 2zyl_A Possible oxidoreductase 99.1 9.4E-11 3.2E-15 137.0 9.0 79 493-572 46-130 (386)
236 2jza_A Nitrite reductase [NAD( 99.1 5E-11 1.7E-15 115.5 5.5 75 971-1047 31-111 (130)
237 1rie_A Rieske iron-sulfur prot 99.1 2.9E-11 1E-15 116.5 3.5 70 972-1042 59-128 (129)
238 3vca_A Ring-hydroxylating diox 99.0 2.9E-10 9.9E-15 132.7 9.7 80 493-573 65-153 (412)
239 3n0q_A Putative aromatic-ring 99.0 3.7E-10 1.2E-14 131.7 9.8 80 493-573 63-151 (409)
240 2de6_A Terminal oxygenase comp 99.0 4.3E-10 1.5E-14 132.4 9.3 79 494-573 50-138 (392)
241 1g8k_B Arsenite oxidase; molyb 99.0 2.9E-10 9.8E-15 110.2 5.5 69 975-1044 50-120 (133)
242 1z01_A 2-OXO-1,2-dihydroquinol 99.0 6.7E-10 2.3E-14 132.7 9.9 81 493-574 64-154 (446)
243 1rfs_A Rieske protein; iron-su 99.0 4.1E-10 1.4E-14 109.7 6.4 69 973-1044 53-123 (139)
244 2gbw_A Biphenyl 2,3-dioxygenas 99.0 9.4E-10 3.2E-14 132.1 10.6 80 492-572 58-150 (454)
245 3azc_A Cytochrome B6-F complex 98.5 6.6E-11 2.3E-15 113.1 0.0 78 965-1044 39-118 (133)
246 3d89_A Rieske domain-containin 98.9 2.4E-10 8.2E-15 115.0 3.6 75 970-1046 43-135 (157)
247 1rp0_A ARA6, thiazole biosynth 98.9 1.6E-09 5.5E-14 122.5 10.3 166 1206-1376 40-272 (284)
248 2bmo_A Oxygenase-alpha NBDO; n 98.9 9.2E-10 3.2E-14 132.0 7.8 79 492-571 57-149 (447)
249 2zxi_A TRNA uridine 5-carboxym 98.9 7.6E-09 2.6E-13 126.0 15.2 146 595-765 27-220 (637)
250 1uli_A Biphenyl dioxygenase la 98.9 1.3E-09 4.4E-14 130.8 7.7 79 492-571 76-166 (460)
251 2nwf_A Ubiquinol-cytochrome C 98.9 6.9E-10 2.4E-14 107.7 4.2 67 975-1042 73-140 (141)
252 3gzx_A Biphenyl dioxygenase su 98.8 4.1E-09 1.4E-13 124.4 9.1 79 493-572 79-176 (457)
253 1nyk_A Rieske iron-sulfur prot 98.8 1.8E-09 6.1E-14 108.0 4.7 68 977-1045 79-147 (165)
254 2b1x_A Naphthalene dioxygenase 98.8 4.2E-09 1.4E-13 126.9 8.9 60 493-553 67-127 (470)
255 1rp0_A ARA6, thiazole biosynth 98.8 1E-08 3.4E-13 115.9 10.8 168 183-355 40-274 (284)
256 1pp9_E Ubiquinol-cytochrome C 98.8 2E-09 7E-14 110.6 4.0 69 973-1042 127-195 (196)
257 1jm1_A Rieske iron-sulfur prot 98.8 3.6E-09 1.2E-13 109.5 5.8 70 975-1044 84-166 (204)
258 3gke_A DDMC; rieske cluster, n 98.8 3.9E-09 1.3E-13 121.7 5.1 83 964-1048 28-117 (349)
259 2qjy_C Ubiquinol-cytochrome C 98.7 4.9E-09 1.7E-13 107.5 4.5 67 975-1042 119-186 (187)
260 3k7m_X 6-hydroxy-L-nicotine ox 98.7 2E-09 7E-14 130.6 0.5 94 776-872 204-306 (431)
261 3gcf_A Terminal oxygenase comp 98.7 7E-09 2.4E-13 117.5 4.5 81 962-1044 53-143 (394)
262 2zxi_A TRNA uridine 5-carboxym 98.7 1E-07 3.5E-12 116.1 14.6 149 42-213 26-220 (637)
263 2zyl_A Possible oxidoreductase 98.7 1.1E-08 3.9E-13 119.4 5.5 85 959-1045 41-131 (386)
264 3gkq_A Terminal oxygenase comp 98.7 7.4E-09 2.5E-13 116.8 3.7 73 970-1044 58-140 (389)
265 3ces_A MNMG, tRNA uridine 5-ca 98.7 4.4E-08 1.5E-12 119.8 10.5 147 594-765 27-221 (651)
266 1vf5_D Rieske iron-sulfur prot 98.6 3.2E-09 1.1E-13 108.8 0.2 70 972-1044 93-164 (179)
267 3cx5_E Cytochrome B-C1 complex 98.6 1.7E-08 5.9E-13 103.1 4.6 66 975-1042 119-184 (185)
268 3k7m_X 6-hydroxy-L-nicotine ox 98.6 1.5E-09 5E-14 131.8 -4.0 95 1247-1344 204-307 (431)
269 3vca_A Ring-hydroxylating diox 98.6 2.5E-08 8.7E-13 116.4 6.3 83 962-1046 63-154 (412)
270 3n0q_A Putative aromatic-ring 98.6 3.6E-08 1.2E-12 115.0 6.3 84 961-1046 60-152 (409)
271 3pl8_A Pyranose 2-oxidase; sub 98.5 4.9E-10 1.7E-14 140.3 -11.4 242 1066-1316 46-335 (623)
272 2bry_A NEDD9 interacting prote 98.5 4.4E-08 1.5E-12 119.9 5.2 146 1162-1308 37-233 (497)
273 3ces_A MNMG, tRNA uridine 5-ca 98.5 1.4E-07 4.7E-12 115.5 9.1 149 42-213 27-221 (651)
274 2de6_A Terminal oxygenase comp 98.5 5.6E-08 1.9E-12 114.3 3.8 81 963-1045 48-138 (392)
275 1z01_A 2-OXO-1,2-dihydroquinol 98.4 7.7E-08 2.6E-12 114.8 4.7 82 962-1045 62-153 (446)
276 2gbw_A Biphenyl 2,3-dioxygenas 98.4 1.4E-07 4.6E-12 113.3 6.6 74 970-1045 65-151 (454)
277 2bry_A NEDD9 interacting prote 98.4 9.8E-08 3.3E-12 116.8 5.3 145 691-836 37-232 (497)
278 4dgk_A Phytoene dehydrogenase; 98.4 1.9E-07 6.4E-12 115.6 7.2 57 1247-1304 221-277 (501)
279 1kf6_A Fumarate reductase flav 98.4 6E-07 2.1E-11 112.0 11.0 36 595-630 5-40 (602)
280 2e4g_A Tryptophan halogenase; 98.4 2.1E-06 7.1E-11 106.8 15.7 60 1247-1307 194-254 (550)
281 1kf6_A Fumarate reductase flav 98.4 4.5E-07 1.5E-11 113.1 9.6 35 1067-1101 6-40 (602)
282 3cp8_A TRNA uridine 5-carboxym 98.4 4.4E-07 1.5E-11 111.1 9.0 146 594-764 20-214 (641)
283 2bmo_A Oxygenase-alpha NBDO; n 98.4 1.3E-07 4.5E-12 113.3 3.7 74 970-1045 64-151 (447)
284 3nlc_A Uncharacterized protein 98.3 6.8E-07 2.3E-11 109.0 9.6 111 592-704 104-278 (549)
285 3alj_A 2-methyl-3-hydroxypyrid 98.3 7.9E-07 2.7E-11 105.4 9.8 107 595-705 11-162 (379)
286 1uli_A Biphenyl dioxygenase la 98.3 1.8E-07 6.2E-12 112.1 4.0 74 970-1045 83-168 (460)
287 3v76_A Flavoprotein; structura 98.3 5.7E-07 2E-11 106.8 8.2 107 594-703 26-187 (417)
288 3alj_A 2-methyl-3-hydroxypyrid 98.3 7.5E-07 2.6E-11 105.6 7.4 109 42-152 10-161 (379)
289 3cp8_A TRNA uridine 5-carboxym 98.2 1.8E-06 6.1E-11 105.8 9.7 149 42-212 20-214 (641)
290 3dme_A Conserved exported prot 98.2 6.5E-06 2.2E-10 97.2 14.5 66 1246-1313 149-216 (369)
291 1chu_A Protein (L-aspartate ox 98.2 2.8E-06 9.7E-11 104.6 11.6 54 297-354 354-409 (540)
292 2i0z_A NAD(FAD)-utilizing dehy 98.2 1.8E-06 6.3E-11 104.3 9.4 110 592-703 23-191 (447)
293 1chu_A Protein (L-aspartate ox 98.2 5.3E-06 1.8E-10 102.2 13.5 35 594-631 7-41 (540)
294 3nlc_A Uncharacterized protein 98.2 2.4E-06 8.2E-11 104.2 10.1 113 1205-1318 107-292 (549)
295 2b1x_A Naphthalene dioxygenase 98.2 7.7E-07 2.6E-11 107.1 5.5 74 970-1045 73-160 (470)
296 3gzx_A Biphenyl dioxygenase su 98.2 1.1E-06 3.8E-11 103.7 6.6 76 970-1047 85-179 (457)
297 2i0z_A NAD(FAD)-utilizing dehy 98.2 1.7E-06 6E-11 104.5 8.1 107 1065-1174 25-191 (447)
298 3nix_A Flavoprotein/dehydrogen 98.2 3.1E-06 1.1E-10 102.0 10.3 59 224-282 106-166 (421)
299 3dme_A Conserved exported prot 98.1 1.6E-05 5.5E-10 93.8 15.3 67 776-844 150-219 (369)
300 1s3e_A Amine oxidase [flavin-c 98.1 1.1E-06 3.9E-11 108.8 5.4 52 1251-1304 216-267 (520)
301 2gag_B Heterotetrameric sarcos 98.1 1.5E-05 5E-10 95.5 14.5 58 776-835 174-231 (405)
302 3dje_A Fructosyl amine: oxygen 98.1 6.9E-06 2.4E-10 99.4 11.8 58 224-282 161-221 (438)
303 3i3l_A Alkylhalidase CMLS; fla 98.1 8.9E-06 3E-10 100.9 12.7 58 224-282 128-188 (591)
304 2x3n_A Probable FAD-dependent 98.1 4.4E-06 1.5E-10 99.8 9.4 107 595-703 6-166 (399)
305 2e4g_A Tryptophan halogenase; 98.1 2.2E-05 7.6E-10 97.4 15.5 59 776-835 194-253 (550)
306 4dgk_A Phytoene dehydrogenase; 98.1 8.1E-06 2.8E-10 100.8 11.0 57 776-833 221-277 (501)
307 3pl8_A Pyranose 2-oxidase; sub 98.1 4E-07 1.4E-11 114.0 -0.9 59 787-845 271-335 (623)
308 3nyc_A D-arginine dehydrogenas 98.0 4E-06 1.4E-10 99.6 6.8 57 1246-1305 153-209 (381)
309 2gag_B Heterotetrameric sarcos 98.0 3.5E-05 1.2E-09 92.2 14.7 57 1247-1305 174-230 (405)
310 2x3n_A Probable FAD-dependent 98.0 9.7E-06 3.3E-10 96.7 9.8 106 1066-1174 6-166 (399)
311 2gf3_A MSOX, monomeric sarcosi 98.0 3.1E-05 1.1E-09 92.1 14.0 80 757-843 134-213 (389)
312 1ryi_A Glycine oxidase; flavop 98.0 5.9E-06 2E-10 98.1 7.6 38 591-630 13-50 (382)
313 3ps9_A TRNA 5-methylaminomethy 98.0 3.3E-05 1.1E-09 98.6 15.0 68 1246-1316 416-483 (676)
314 1y56_B Sarcosine oxidase; dehy 98.0 5.2E-05 1.8E-09 89.8 15.4 58 1246-1305 148-205 (382)
315 3rp8_A Flavoprotein monooxygen 98.0 8.3E-06 2.9E-10 97.6 8.4 109 591-703 19-181 (407)
316 1y56_B Sarcosine oxidase; dehy 98.0 4.2E-05 1.5E-09 90.6 14.4 58 776-835 149-206 (382)
317 3i3l_A Alkylhalidase CMLS; fla 98.0 1.2E-05 4E-10 99.8 9.8 107 595-703 23-188 (591)
318 3ps9_A TRNA 5-methylaminomethy 98.0 1.3E-05 4.3E-10 102.5 10.2 46 657-702 426-472 (676)
319 3v76_A Flavoprotein; structura 98.0 1.8E-05 6.1E-10 93.9 10.7 98 1205-1305 27-187 (417)
320 1y0p_A Fumarate reductase flav 98.0 1.4E-05 4.9E-10 99.8 10.3 39 593-633 124-162 (571)
321 3dje_A Fructosyl amine: oxygen 98.0 2.4E-05 8.3E-10 94.6 12.0 59 776-835 161-222 (438)
322 3cgv_A Geranylgeranyl reductas 98.0 4.3E-05 1.5E-09 91.1 14.0 57 1248-1305 103-162 (397)
323 1s3e_A Amine oxidase [flavin-c 98.0 6E-06 2.1E-10 102.3 6.7 39 595-635 4-42 (520)
324 3fmw_A Oxygenase; mithramycin, 97.9 1.1E-05 3.8E-10 99.9 9.0 108 594-703 48-207 (570)
325 1yvv_A Amine oxidase, flavin-c 97.9 1.9E-05 6.4E-10 91.8 10.3 105 595-701 2-160 (336)
326 3oz2_A Digeranylgeranylglycero 97.9 9.9E-06 3.4E-10 96.7 7.9 36 595-632 4-39 (397)
327 3fmw_A Oxygenase; mithramycin, 97.9 7.9E-06 2.7E-10 101.3 7.2 110 42-151 48-207 (570)
328 3pvc_A TRNA 5-methylaminomethy 97.9 2.1E-05 7.2E-10 100.5 11.1 56 224-281 412-468 (689)
329 3e1t_A Halogenase; flavoprotei 97.9 1.8E-05 6.2E-10 97.4 10.1 108 595-705 7-174 (512)
330 3qj4_A Renalase; FAD/NAD(P)-bi 97.9 1.4E-05 4.9E-10 93.0 8.6 104 596-701 2-163 (342)
331 3axb_A Putative oxidoreductase 97.9 4.8E-06 1.6E-10 101.2 4.6 59 1246-1305 180-254 (448)
332 3ihg_A RDME; flavoenzyme, anth 97.9 1.7E-05 5.7E-10 98.6 9.6 109 594-704 4-184 (535)
333 3pvc_A TRNA 5-methylaminomethy 97.9 0.0001 3.6E-09 94.0 17.1 66 776-844 412-478 (689)
334 2vou_A 2,6-dihydroxypyridine h 97.9 2.6E-05 8.9E-10 92.8 10.8 108 594-703 4-153 (397)
335 3atr_A Conserved archaeal prot 97.9 1.2E-05 4.1E-10 97.5 8.0 107 595-704 6-163 (453)
336 3rp8_A Flavoprotein monooxygen 97.9 8.1E-06 2.8E-10 97.7 6.4 37 40-76 20-56 (407)
337 3qj4_A Renalase; FAD/NAD(P)-bi 97.9 1.2E-05 4.1E-10 93.7 7.4 103 1067-1172 2-163 (342)
338 1qo8_A Flavocytochrome C3 fuma 97.9 1.7E-05 5.7E-10 98.9 9.0 38 593-632 119-156 (566)
339 2qa2_A CABE, polyketide oxygen 97.9 2.9E-05 9.9E-10 94.9 10.7 110 592-703 9-166 (499)
340 1k0i_A P-hydroxybenzoate hydro 97.9 2.3E-05 7.9E-10 93.3 9.4 108 595-704 2-164 (394)
341 2xdo_A TETX2 protein; tetracyc 97.9 2.4E-05 8.1E-10 93.2 9.4 109 594-704 25-183 (398)
342 2qa1_A PGAE, polyketide oxygen 97.8 3E-05 1E-09 94.8 10.1 110 592-703 8-165 (500)
343 2xdo_A TETX2 protein; tetracyc 97.8 4.7E-05 1.6E-09 90.6 11.5 106 1066-1174 26-182 (398)
344 2gf3_A MSOX, monomeric sarcosi 97.8 7.4E-05 2.5E-09 88.8 13.1 80 1228-1314 134-213 (389)
345 3cgv_A Geranylgeranyl reductas 97.8 1.7E-05 5.7E-10 94.7 7.5 106 595-703 4-162 (397)
346 3nrn_A Uncharacterized protein 97.8 4.3E-05 1.5E-09 91.8 10.6 60 1247-1310 189-248 (421)
347 3e1t_A Halogenase; flavoprotei 97.8 2.1E-05 7.1E-10 96.9 7.7 35 42-76 6-40 (512)
348 3ihg_A RDME; flavoenzyme, anth 97.8 1.8E-05 6.1E-10 98.3 7.0 35 42-76 4-38 (535)
349 2gmh_A Electron transfer flavo 97.8 3.1E-05 1.1E-09 96.4 9.1 36 595-632 35-76 (584)
350 3nrn_A Uncharacterized protein 97.8 1.3E-05 4.3E-10 96.5 5.4 60 776-839 189-248 (421)
351 3oz2_A Digeranylgeranylglycero 97.8 0.00015 5.1E-09 86.3 14.6 98 1207-1305 6-162 (397)
352 3axb_A Putative oxidoreductase 97.7 0.00012 3.9E-09 88.9 12.3 66 776-843 181-262 (448)
353 2qa2_A CABE, polyketide oxygen 97.7 4.4E-05 1.5E-09 93.2 8.4 112 40-151 9-166 (499)
354 3nyc_A D-arginine dehydrogenas 97.7 2.1E-05 7.2E-10 93.2 5.4 35 593-630 7-41 (381)
355 2qa1_A PGAE, polyketide oxygen 97.7 5.4E-05 1.8E-09 92.5 9.1 111 41-151 9-165 (500)
356 3jsk_A Cypbp37 protein; octame 97.7 6.1E-05 2.1E-09 85.1 8.7 38 594-633 78-117 (344)
357 2oln_A NIKD protein; flavoprot 97.7 5.4E-05 1.9E-09 90.2 8.5 34 595-630 4-37 (397)
358 2uzz_A N-methyl-L-tryptophan o 97.7 5.1E-05 1.7E-09 89.6 8.1 34 595-630 2-35 (372)
359 1d4d_A Flavocytochrome C fumar 97.7 9.3E-05 3.2E-09 92.1 10.4 38 594-633 125-162 (572)
360 3nix_A Flavoprotein/dehydrogen 97.6 0.00018 6.2E-09 86.4 12.3 100 1206-1305 6-166 (421)
361 4hb9_A Similarities with proba 97.6 9.2E-05 3.1E-09 88.7 9.6 106 596-703 2-166 (412)
362 2pyx_A Tryptophan halogenase; 97.6 0.00056 1.9E-08 84.4 16.8 59 224-283 175-234 (526)
363 1pj5_A N,N-dimethylglycine oxi 97.6 0.00021 7.1E-09 93.5 13.4 58 1246-1305 150-207 (830)
364 1qo8_A Flavocytochrome C3 fuma 97.6 8.8E-05 3E-09 92.4 9.1 101 1205-1306 121-313 (566)
365 3c96_A Flavin-containing monoo 97.6 5.9E-05 2E-09 90.2 7.1 34 43-76 4-38 (410)
366 3nks_A Protoporphyrinogen oxid 97.6 0.00011 3.6E-09 90.1 9.5 55 1248-1304 235-289 (477)
367 3c96_A Flavin-containing monoo 97.6 7E-05 2.4E-09 89.5 7.7 35 595-630 4-38 (410)
368 2weu_A Tryptophan 5-halogenase 97.6 0.00025 8.5E-09 87.5 12.8 59 1247-1306 173-231 (511)
369 3c4n_A Uncharacterized protein 97.6 7.2E-05 2.5E-09 89.1 7.5 34 595-630 36-71 (405)
370 1y0p_A Fumarate reductase flav 97.6 0.00026 8.8E-09 88.4 12.7 101 1205-1305 126-317 (571)
371 2pyx_A Tryptophan halogenase; 97.5 0.00077 2.6E-08 83.1 16.4 59 776-835 175-234 (526)
372 3jsk_A Cypbp37 protein; octame 97.5 0.00031 1E-08 79.4 11.4 168 1205-1376 79-332 (344)
373 2oln_A NIKD protein; flavoprot 97.5 0.00069 2.4E-08 80.5 15.2 56 1247-1305 153-208 (397)
374 4at0_A 3-ketosteroid-delta4-5a 97.5 0.0002 6.9E-09 87.9 10.4 37 594-632 40-76 (510)
375 1k0i_A P-hydroxybenzoate hydro 97.5 0.00035 1.2E-08 83.0 12.2 101 1206-1307 3-165 (394)
376 1ryi_A Glycine oxidase; flavop 97.5 0.00029 9.9E-09 83.3 11.4 61 1248-1312 165-225 (382)
377 1pj5_A N,N-dimethylglycine oxi 97.5 0.00055 1.9E-08 89.5 14.8 65 776-843 151-215 (830)
378 1yvv_A Amine oxidase, flavin-c 97.5 0.00035 1.2E-08 80.9 11.5 100 1206-1308 3-165 (336)
379 3atr_A Conserved archaeal prot 97.5 0.00038 1.3E-08 84.3 11.9 101 1206-1307 7-164 (453)
380 2vou_A 2,6-dihydroxypyridine h 97.5 0.00025 8.5E-09 84.3 10.0 100 1205-1306 5-154 (397)
381 3da1_A Glycerol-3-phosphate de 97.5 0.00053 1.8E-08 84.8 13.3 59 1246-1305 169-232 (561)
382 3da1_A Glycerol-3-phosphate de 97.4 0.0002 6.9E-09 88.6 8.8 58 776-834 170-232 (561)
383 2qcu_A Aerobic glycerol-3-phos 97.4 0.00029 9.8E-09 86.4 10.0 34 595-630 3-36 (501)
384 2weu_A Tryptophan 5-halogenase 97.4 0.0013 4.4E-08 81.1 15.7 59 776-835 173-231 (511)
385 2dkh_A 3-hydroxybenzoate hydro 97.4 0.00017 5.7E-09 91.1 7.5 36 594-631 31-67 (639)
386 1d4d_A Flavocytochrome C fumar 97.3 0.00083 2.8E-08 83.5 13.2 101 1205-1306 126-318 (572)
387 3kkj_A Amine oxidase, flavin-c 97.3 0.00015 5.2E-09 82.0 5.8 38 595-634 2-39 (336)
388 3c4a_A Probable tryptophan hyd 97.3 9E-05 3.1E-09 87.5 3.7 35 596-632 1-37 (381)
389 2r0c_A REBC; flavin adenine di 97.3 0.00039 1.3E-08 86.2 9.4 35 595-631 26-60 (549)
390 2gmh_A Electron transfer flavo 97.3 0.0012 4E-08 82.3 13.6 101 1206-1306 36-218 (584)
391 2qcu_A Aerobic glycerol-3-phos 97.2 0.00038 1.3E-08 85.2 8.4 34 1066-1101 3-36 (501)
392 3kkj_A Amine oxidase, flavin-c 97.2 0.00022 7.6E-09 80.7 5.7 36 1067-1104 3-38 (336)
393 2r0c_A REBC; flavin adenine di 97.2 0.00025 8.6E-09 87.8 6.6 36 41-76 24-59 (549)
394 4gut_A Lysine-specific histone 97.2 0.00048 1.6E-08 87.8 8.6 39 594-634 335-373 (776)
395 2aqj_A Tryptophan halogenase, 97.2 0.002 6.9E-08 79.6 14.0 56 1251-1307 169-224 (538)
396 2dkh_A 3-hydroxybenzoate hydro 97.2 0.00034 1.2E-08 88.3 6.8 35 42-76 31-66 (639)
397 2wdq_A Succinate dehydrogenase 97.1 0.0018 6.3E-08 80.4 13.2 60 776-835 143-207 (588)
398 4hb9_A Similarities with proba 97.1 0.0016 5.4E-08 77.8 12.0 100 1206-1306 2-167 (412)
399 2gjc_A Thiazole biosynthetic e 97.1 0.0022 7.5E-08 72.0 12.0 166 1206-1376 66-322 (326)
400 2uzz_A N-methyl-L-tryptophan o 97.1 0.0012 4.3E-08 77.5 10.4 55 1248-1305 150-204 (372)
401 3c4a_A Probable tryptophan hyd 97.1 0.00016 5.6E-09 85.3 2.4 34 1068-1103 2-37 (381)
402 2h88_A Succinate dehydrogenase 97.1 0.0011 3.7E-08 82.5 9.8 34 595-630 18-51 (621)
403 2gjc_A Thiazole biosynthetic e 97.0 0.003 1E-07 70.9 11.9 101 183-283 66-240 (326)
404 4at0_A 3-ketosteroid-delta4-5a 97.0 0.0026 8.9E-08 78.0 12.3 58 1248-1305 203-264 (510)
405 2aqj_A Tryptophan halogenase, 97.0 0.0037 1.3E-07 77.3 13.7 56 228-284 169-224 (538)
406 3ka7_A Oxidoreductase; structu 97.0 0.0021 7.4E-08 77.0 11.1 56 1253-1310 202-257 (425)
407 3c4n_A Uncharacterized protein 97.0 0.0012 4E-08 78.6 8.6 97 1206-1305 37-236 (405)
408 2rgh_A Alpha-glycerophosphate 96.9 0.0015 5.2E-08 80.9 9.1 35 594-630 31-65 (571)
409 3gyx_A Adenylylsulfate reducta 96.8 0.0021 7.3E-08 80.4 8.8 34 595-630 22-61 (662)
410 1pn0_A Phenol 2-monooxygenase; 96.7 0.0021 7E-08 81.2 8.2 34 595-630 8-46 (665)
411 4gde_A UDP-galactopyranose mut 96.6 0.0011 3.7E-08 81.9 4.7 53 776-832 222-274 (513)
412 1jnr_A Adenylylsulfate reducta 96.5 0.0055 1.9E-07 77.0 10.1 35 594-630 21-59 (643)
413 2e1m_A L-glutamate oxidase; L- 96.4 0.0027 9.3E-08 73.3 6.2 40 593-634 42-82 (376)
414 4gde_A UDP-galactopyranose mut 96.3 0.0017 5.8E-08 80.1 4.2 52 1247-1302 222-273 (513)
415 2bcg_G Secretory pathway GDP d 96.3 0.0029 9.9E-08 76.3 6.0 59 1247-1306 242-301 (453)
416 2e1m_A L-glutamate oxidase; L- 96.3 0.0035 1.2E-07 72.4 6.2 38 1065-1104 43-81 (376)
417 3ihm_A Styrene monooxygenase A 96.3 0.0017 5.8E-08 77.7 3.7 34 43-76 22-55 (430)
418 2b9w_A Putative aminooxidase; 96.3 0.0036 1.2E-07 74.9 6.6 40 594-635 5-45 (424)
419 2bcg_G Secretory pathway GDP d 96.3 0.0035 1.2E-07 75.5 6.1 59 776-835 242-301 (453)
420 3nks_A Protoporphyrinogen oxid 96.2 0.0032 1.1E-07 76.8 5.8 54 777-832 235-288 (477)
421 1c0p_A D-amino acid oxidase; a 96.2 0.0028 9.5E-08 74.1 4.7 33 42-74 5-37 (363)
422 3ka7_A Oxidoreductase; structu 96.2 0.0032 1.1E-07 75.5 5.3 62 776-839 196-257 (425)
423 1pn0_A Phenol 2-monooxygenase; 96.1 0.0053 1.8E-07 77.5 7.0 35 1066-1102 8-47 (665)
424 3hdq_A UDP-galactopyranose mut 96.1 0.005 1.7E-07 71.7 6.1 41 593-635 27-67 (397)
425 2b9w_A Putative aminooxidase; 96.1 0.0051 1.8E-07 73.6 6.4 38 1066-1105 6-44 (424)
426 1rsg_A FMS1 protein; FAD bindi 96.1 0.0035 1.2E-07 77.1 4.9 40 595-636 8-48 (516)
427 3ihm_A Styrene monooxygenase A 96.1 0.0035 1.2E-07 75.0 4.8 34 1066-1101 22-55 (430)
428 2jae_A L-amino acid oxidase; o 96.0 0.0051 1.7E-07 75.2 6.2 40 594-635 10-49 (489)
429 2rgh_A Alpha-glycerophosphate 96.0 0.022 7.6E-07 70.5 11.9 52 1253-1305 194-250 (571)
430 1v0j_A UDP-galactopyranose mut 96.0 0.0049 1.7E-07 72.8 5.7 38 1066-1105 7-45 (399)
431 2wdq_A Succinate dehydrogenase 96.0 0.029 9.8E-07 69.6 12.8 54 1251-1304 147-205 (588)
432 1v0j_A UDP-galactopyranose mut 96.0 0.0052 1.8E-07 72.6 5.8 41 594-636 6-47 (399)
433 3g5s_A Methylenetetrahydrofola 96.0 0.0058 2E-07 69.1 5.6 34 43-76 1-34 (443)
434 3i6d_A Protoporphyrinogen oxid 95.9 0.0033 1.1E-07 76.6 3.8 40 595-634 5-48 (470)
435 1rsg_A FMS1 protein; FAD bindi 95.9 0.0038 1.3E-07 76.8 4.3 39 1066-1106 8-47 (516)
436 2jae_A L-amino acid oxidase; o 95.9 0.0066 2.2E-07 74.2 6.3 38 1066-1105 11-48 (489)
437 2ivd_A PPO, PPOX, protoporphyr 95.9 0.0055 1.9E-07 74.7 5.4 42 592-635 13-54 (478)
438 3hdq_A UDP-galactopyranose mut 95.9 0.0067 2.3E-07 70.7 5.7 39 1065-1105 28-66 (397)
439 1c0p_A D-amino acid oxidase; a 95.8 0.0065 2.2E-07 70.9 5.7 35 1065-1101 5-39 (363)
440 2vvm_A Monoamine oxidase N; FA 95.8 0.0066 2.3E-07 74.3 6.0 55 776-832 255-310 (495)
441 3i6d_A Protoporphyrinogen oxid 95.8 0.0036 1.2E-07 76.2 3.5 38 1066-1105 5-48 (470)
442 2h88_A Succinate dehydrogenase 95.8 0.027 9.1E-07 70.0 11.3 53 1252-1305 160-217 (621)
443 2bs2_A Quinol-fumarate reducta 95.7 0.039 1.3E-06 69.0 12.3 54 1251-1305 162-220 (660)
444 2yg5_A Putrescine oxidase; oxi 95.7 0.0079 2.7E-07 72.7 5.7 40 595-636 5-44 (453)
445 2ivd_A PPO, PPOX, protoporphyr 95.7 0.0073 2.5E-07 73.6 5.3 39 1065-1105 15-53 (478)
446 2xag_A Lysine-specific histone 95.6 0.0074 2.5E-07 77.4 5.3 63 13-75 243-310 (852)
447 1i8t_A UDP-galactopyranose mut 95.6 0.0076 2.6E-07 70.2 4.9 38 596-635 2-39 (367)
448 2vvm_A Monoamine oxidase N; FA 95.6 0.0081 2.8E-07 73.5 5.4 56 1247-1304 255-311 (495)
449 2z3y_A Lysine-specific histone 95.6 0.0072 2.5E-07 76.4 5.1 63 13-75 72-139 (662)
450 3g5s_A Methylenetetrahydrofola 95.5 0.011 3.6E-07 67.0 5.4 34 1066-1101 1-34 (443)
451 1sez_A Protoporphyrinogen oxid 95.5 0.0093 3.2E-07 73.2 5.6 38 1066-1105 13-50 (504)
452 1i8t_A UDP-galactopyranose mut 95.5 0.0093 3.2E-07 69.4 4.9 37 1067-1105 2-38 (367)
453 2yg5_A Putrescine oxidase; oxi 95.5 0.0096 3.3E-07 71.9 5.3 39 1066-1106 5-43 (453)
454 4dsg_A UDP-galactopyranose mut 95.5 0.0079 2.7E-07 72.9 4.5 36 41-76 7-43 (484)
455 3lov_A Protoporphyrinogen oxid 95.5 0.011 3.8E-07 71.9 5.8 40 595-634 4-43 (475)
456 3lov_A Protoporphyrinogen oxid 95.4 0.0098 3.3E-07 72.4 5.3 40 1066-1105 4-43 (475)
457 2iid_A L-amino-acid oxidase; f 95.4 0.011 3.8E-07 72.3 5.7 41 593-635 31-71 (498)
458 1sez_A Protoporphyrinogen oxid 95.4 0.011 3.8E-07 72.5 5.5 40 594-635 12-51 (504)
459 4dsg_A UDP-galactopyranose mut 95.3 0.013 4.6E-07 70.9 5.8 40 594-635 8-48 (484)
460 2bi7_A UDP-galactopyranose mut 95.3 0.013 4.5E-07 68.5 5.6 36 1067-1104 4-39 (384)
461 3g3e_A D-amino-acid oxidase; F 95.2 0.0087 3E-07 69.5 3.8 35 596-630 1-39 (351)
462 2x5o_A UDP-N-acetylmuramoylala 95.2 0.023 7.7E-07 67.8 7.2 127 595-763 5-136 (439)
463 2iid_A L-amino-acid oxidase; f 95.2 0.014 4.7E-07 71.5 5.5 39 1065-1105 32-70 (498)
464 2bi7_A UDP-galactopyranose mut 95.1 0.014 4.8E-07 68.4 5.0 38 595-634 3-40 (384)
465 2xag_A Lysine-specific histone 95.1 0.019 6.5E-07 73.6 6.6 41 593-635 276-316 (852)
466 3lk7_A UDP-N-acetylmuramoylala 95.1 0.023 8E-07 67.9 7.0 131 594-762 8-143 (451)
467 3g3e_A D-amino-acid oxidase; F 95.1 0.011 3.8E-07 68.6 4.0 34 1068-1101 2-39 (351)
468 3gyx_A Adenylylsulfate reducta 95.1 0.01 3.5E-07 74.3 3.8 58 225-282 167-233 (662)
469 2z3y_A Lysine-specific histone 95.1 0.018 6.3E-07 72.7 6.2 42 592-635 104-145 (662)
470 1d5t_A Guanine nucleotide diss 95.0 0.021 7.3E-07 68.1 6.3 58 1247-1306 234-291 (433)
471 2bs2_A Quinol-fumarate reducta 95.0 0.0081 2.8E-07 75.2 2.5 58 224-282 158-220 (660)
472 1d5t_A Guanine nucleotide diss 94.8 0.027 9.4E-07 67.1 6.4 58 776-835 234-291 (433)
473 3p1w_A Rabgdi protein; GDI RAB 94.7 0.024 8.2E-07 67.4 5.4 58 776-833 256-313 (475)
474 3eag_A UDP-N-acetylmuramate:L- 94.3 0.07 2.4E-06 60.6 8.1 80 594-708 3-83 (326)
475 1jnr_A Adenylylsulfate reducta 94.3 0.015 5.1E-07 73.1 2.7 59 225-283 152-219 (643)
476 1b37_A Protein (polyamine oxid 94.2 0.038 1.3E-06 67.0 5.8 39 594-634 3-42 (472)
477 2x5o_A UDP-N-acetylmuramoylala 94.0 0.048 1.6E-06 65.0 6.1 128 1066-1235 5-137 (439)
478 4gut_A Lysine-specific histone 94.0 0.036 1.2E-06 70.6 5.2 38 1066-1105 336-373 (776)
479 1kdg_A CDH, cellobiose dehydro 93.6 0.032 1.1E-06 68.9 3.7 63 229-292 201-271 (546)
480 1kdg_A CDH, cellobiose dehydro 93.3 0.057 2E-06 66.6 5.4 63 781-844 201-271 (546)
481 3ayj_A Pro-enzyme of L-phenyla 93.3 0.033 1.1E-06 69.3 3.1 36 1066-1103 56-100 (721)
482 1b37_A Protein (polyamine oxid 93.3 0.038 1.3E-06 66.9 3.6 33 42-74 3-36 (472)
483 3dfz_A SIRC, precorrin-2 dehyd 93.3 0.18 6E-06 53.0 8.0 105 1204-1342 30-140 (223)
484 3ayj_A Pro-enzyme of L-phenyla 93.1 0.038 1.3E-06 68.8 3.1 36 595-630 56-97 (721)
485 3dfz_A SIRC, precorrin-2 dehyd 92.7 0.17 5.8E-06 53.1 7.0 75 733-835 30-104 (223)
486 4g65_A TRK system potassium up 92.6 0.31 1E-05 58.1 9.9 34 594-629 2-35 (461)
487 3lk7_A UDP-N-acetylmuramoylala 92.2 0.092 3.1E-06 62.7 4.8 87 1204-1316 8-98 (451)
488 3eag_A UDP-N-acetylmuramate:L- 92.1 0.14 4.6E-06 58.2 5.9 78 1205-1309 4-82 (326)
489 4g65_A TRK system potassium up 92.1 0.13 4.4E-06 61.3 5.8 53 1185-1238 211-267 (461)
490 1coy_A Cholesterol oxidase; ox 91.7 0.086 2.9E-06 64.2 3.8 37 39-75 7-43 (507)
491 3p1w_A Rabgdi protein; GDI RAB 91.5 0.22 7.7E-06 59.1 7.0 58 1247-1304 256-313 (475)
492 3t37_A Probable dehydrogenase; 91.4 0.077 2.6E-06 65.3 3.0 35 42-76 16-51 (526)
493 3q9t_A Choline dehydrogenase a 91.0 0.14 4.7E-06 63.0 4.5 37 594-631 5-41 (577)
494 3t37_A Probable dehydrogenase; 90.6 0.14 4.9E-06 62.8 4.3 58 1258-1316 222-282 (526)
495 3q9t_A Choline dehydrogenase a 90.5 0.16 5.5E-06 62.3 4.6 58 1258-1315 217-280 (577)
496 1ju2_A HydroxynitrIle lyase; f 90.4 0.13 4.5E-06 62.9 3.7 35 594-631 25-59 (536)
497 1ju2_A HydroxynitrIle lyase; f 90.3 0.13 4.5E-06 62.9 3.6 59 1257-1315 204-271 (536)
498 1n4w_A CHOD, cholesterol oxida 90.3 0.14 4.7E-06 62.3 3.7 35 42-76 4-38 (504)
499 1coy_A Cholesterol oxidase; ox 90.0 0.24 8.2E-06 60.2 5.5 62 1253-1314 233-302 (507)
500 1n4w_A CHOD, cholesterol oxida 89.9 0.22 7.7E-06 60.4 5.1 35 595-631 5-39 (504)
No 1
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.7e-57 Score=550.86 Aligned_cols=395 Identities=28% Similarity=0.437 Sum_probs=367.8
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc---cCcccccccChhhhccCCcEEEcCCe
Q psy2951 1065 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKADSILLRTEEFYKDNDIHVIKGKK 1141 (1466)
Q Consensus 1065 ~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~ 1141 (1466)
.+++|||||||+||++||..|++.|++++|+|||+++++||.++++++.+. .....+..+..+++.+.+++++.+++
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 87 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAE 87 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCE
Confidence 357899999999999999999999997789999999999999999997654 35566677778889999999999988
Q ss_pred EEEeecCCCCeEEecCCcEEecCeEEEecCCCCCcCCCCCCCC--cEEEecCHHHHHhhhcccCC-CCeEEEEcCCHHHH
Q psy2951 1142 IISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHITP-ESNVVVIGSSFIGM 1218 (1466)
Q Consensus 1142 v~~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~--~v~~~~~~~~~~~l~~~~~~-~~~vvVvG~g~~g~ 1218 (1466)
|+.+ |+..+.|.++++..+.||+||+|||++|+.+++| |.+ +++++++.+++.++++.+.. +++++|||+|++|+
T Consensus 88 v~~i-d~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~-g~~~~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~ 165 (415)
T 3lxd_A 88 VVSL-DPAAHTVKLGDGSAIEYGKLIWATGGDPRRLSCV-GADLAGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGL 165 (415)
T ss_dssp EEEE-ETTTTEEEETTSCEEEEEEEEECCCEECCCCBTT-SSCCBTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHH
T ss_pred EEEE-ECCCCEEEECCCCEEEeeEEEEccCCccCCCCCC-CccccCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHH
Confidence 9999 9999999999999999999999999999999999 876 89999999999999888777 89999999999999
Q ss_pred HHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEE
Q psy2951 1219 EAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 1298 (1466)
Q Consensus 1219 e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv 1298 (1466)
|+|..+++.|.+|+++++.++++.+.+++++.+.+.+.++++||+++++++|++++ .+++++..|.+.||++++||.||
T Consensus 166 e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~~~~~v~~v~l~dG~~i~aD~Vv 244 (415)
T 3lxd_A 166 EAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIE-GDGTKVTGVRMQDGSVIPADIVI 244 (415)
T ss_dssp HHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEE-ESSSBEEEEEESSSCEEECSEEE
T ss_pred HHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEE-ecCCcEEEEEeCCCCEEEcCEEE
Confidence 99999999999999999999999988999999999999999999999999999998 55668888999999999999999
Q ss_pred EeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCC
Q psy2951 1299 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK 1378 (1466)
Q Consensus 1299 ~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~ 1378 (1466)
+|+|..|++++++.+|+..+ +| |.||++++|+.|+|||+|||+.++.....|.+.++++|+.|..||+.||+||+|+.
T Consensus 245 ~a~G~~p~~~l~~~~gl~~~-~g-i~vd~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 322 (415)
T 3lxd_A 245 VGIGIVPCVGALISAGASGG-NG-VDVDEFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAP 322 (415)
T ss_dssp ECSCCEESCHHHHHTTCCCS-SS-EECCTTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCC
T ss_pred ECCCCccChHHHHhCCCCcC-CC-EEECCCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999887 45 99999999999999999999999876522788999999999999999999999998
Q ss_pred CCCCCCccceeccccccEEEEeeCCCCceEEEcCCcCCceEEEEEEeCCEEEEEEEecCcHHHHHHHHHHHcCCCCChhc
Q psy2951 1379 TSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEALKFTAYYSNADKVLAILTVGMDPLAAQFAERIKMQKYIQKDQ 1458 (1466)
Q Consensus 1379 ~~~~~~p~~w~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1458 (1466)
.+|..+|||||+||+.++|++|...++++++++||+++..|.+||+++|+|+|++++|+++++..++++|+++.++++++
T Consensus 323 ~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (415)
T 3lxd_A 323 VPYKATPWFWSNQYDLKLQTVGLSTGHDNAVLRGDPATRSFSVVYLKGGKVVALDCVNMVKDYVQGKKLVEARAQIAPEQ 402 (415)
T ss_dssp CCCCCCCEEEEEETTEEEEEEECCTTCSEEEEEEEGGGTEEEEEEEETTEEEEEEEESCHHHHHHHHHHHHHTCCCCHHH
T ss_pred CCCCCCCeeEeeeCCcEEEEEeCCCCCCEEEEEecCCCCeEEEEEEECCEEEEEEEECChHHHHHHHHHHHCCCCCCHHH
Confidence 89999999999999999999999988899999999988999999999999999999999999999999999999999999
Q ss_pred ccccCc
Q psy2951 1459 IENNAW 1464 (1466)
Q Consensus 1459 ~~~~~~ 1464 (1466)
|+|.+.
T Consensus 403 l~~~~~ 408 (415)
T 3lxd_A 403 LADAGV 408 (415)
T ss_dssp HTCTTS
T ss_pred hcCCCC
Confidence 977653
No 2
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=6.9e-57 Score=542.88 Aligned_cols=391 Identities=27% Similarity=0.448 Sum_probs=365.6
Q ss_pred CcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc---cCcccccccChhhhccCCcEEEcCCeEE
Q psy2951 1067 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKADSILLRTEEFYKDNDIHVIKGKKII 1143 (1466)
Q Consensus 1067 ~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~v~ 1143 (1466)
++|||||||+||++||..|++.|++.+|+|||+++++||.++++++.+. .....+..+..+++.+.+++++. ++|+
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v~ 80 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRMV 80 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEEE
Confidence 5899999999999999999999998899999999999999999997654 34566667778889999999999 8899
Q ss_pred EeecCCCCeEEecCCcEEecCeEEEecCCCCCcCCCCCCCC--cEEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHH
Q psy2951 1144 SDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAA 1221 (1466)
Q Consensus 1144 ~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~--~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a 1221 (1466)
.+ |+..+.|.++++.++.||+||+|||++|+.+++| |.+ +++++++.+++..+++.+..+++++|||+|++|+|+|
T Consensus 81 ~i-d~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~i~-g~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A 158 (404)
T 3fg2_P 81 SI-DREGRKLLLASGTAIEYGHLVLATGARNRMLDVP-NASLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFA 158 (404)
T ss_dssp EE-ETTTTEEEESSSCEEECSEEEECCCEEECCCCST-TTTSTTEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHH
T ss_pred EE-ECCCCEEEECCCCEEECCEEEEeeCCCccCCCCC-CCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHH
Confidence 99 9999999999999999999999999999999999 876 8999999999999988888899999999999999999
Q ss_pred HHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEee
Q psy2951 1222 AFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGI 1301 (1466)
Q Consensus 1222 ~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~ 1301 (1466)
..+++.|.+|+++++.+.++.+.+++++.+.+.+.++++||+++++++|++++ .+++++..|.+.||++++||.||+|+
T Consensus 159 ~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~~~~~v~~V~~~dG~~i~aD~Vv~a~ 237 (404)
T 3fg2_P 159 ATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIA-AEGDRVTGVVLSDGNTLPCDLVVVGV 237 (404)
T ss_dssp HHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEE-EETTEEEEEEETTSCEEECSEEEECC
T ss_pred HHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEE-ecCCcEEEEEeCCCCEEEcCEEEECc
Confidence 99999999999999999999888999999999999999999999999999998 45567888999999999999999999
Q ss_pred ccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCCCCC
Q psy2951 1302 GTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTSL 1381 (1466)
Q Consensus 1302 G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~~~ 1381 (1466)
|..|++++++.+|+..+ +| |.||++++|+.|+|||+|||+..+... .|.++++++|..|..||+.||+||+|+..+|
T Consensus 238 G~~p~~~l~~~~gl~~~-~G-i~vd~~~~t~~~~iya~GD~a~~~~~~-~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~ 314 (404)
T 3fg2_P 238 GVIPNVEIAAAAGLPTA-AG-IIVDQQLLTSDPHISAIGDCALFESVR-FGETMRVESVQNATDQARCVAARLTGDAKPY 314 (404)
T ss_dssp CEEECCHHHHHTTCCBS-SS-EEECTTSBCSSTTEEECGGGEEEEETT-TTEEECCCSHHHHHHHHHHHHHHTTTCCCCC
T ss_pred CCccCHHHHHhCCCCCC-CC-EEECCCcccCCCCEEEeecceeecCcc-CCceeeehHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999887 45 999999999999999999999988765 5888999999999999999999999998899
Q ss_pred CCCccceeccccccEEEEeeCCCCceEEEcCCcCCceEEEEEEeCCEEEEEEEecCcHHHHHHHHHHHcCCCCChhcccc
Q psy2951 1382 STIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEALKFTAYYSNADKVLAILTVGMDPLAAQFAERIKMQKYIQKDQIEN 1461 (1466)
Q Consensus 1382 ~~~p~~w~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1461 (1466)
..+|||||+||+.++|++|....+++++++||+++..|++||+++|+|+|++++|+++++..++++|+++.++++++|+|
T Consensus 315 ~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 394 (404)
T 3fg2_P 315 DGYPWFWSDQGDDKLQIVGLTAGFDQVVIRGSVAERSFSAFCYKAGKLIGIESVNRAADHVFGRKILPLDKSVTPEQAAD 394 (404)
T ss_dssp CCCCEEEEEETTEEEEEEECCTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEESCHHHHHHHHHHTTTTCCCCHHHHHC
T ss_pred CCCCceEeEECCcEEEEEeCCCCCCEEEEEecCCCCcEEEEEEECCEEEEEEEeCCHHHHHHHHHHHHcCCCCCHHHhcC
Confidence 99999999999999999999988899999999989999999999999999999999999999999999999999999977
Q ss_pred cCc
Q psy2951 1462 NAW 1464 (1466)
Q Consensus 1462 ~~~ 1464 (1466)
.+.
T Consensus 395 ~~~ 397 (404)
T 3fg2_P 395 LSF 397 (404)
T ss_dssp TTS
T ss_pred CCC
Confidence 653
No 3
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=1.2e-56 Score=540.91 Aligned_cols=389 Identities=25% Similarity=0.397 Sum_probs=362.9
Q ss_pred CcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc---cCcccccccChhhhccCCcEEEcCCeEE
Q psy2951 1067 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKADSILLRTEEFYKDNDIHVIKGKKII 1143 (1466)
Q Consensus 1067 ~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~v~ 1143 (1466)
++|||||||+||++||..|++.|++++|+|||+++++||+++++++.+. ...+.+ ++..+++.+.+++++.+++|+
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~-~~~~~~~~~~~i~~~~~~~v~ 81 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPI-LAEADWYGEARIDMLTGPEVT 81 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCB-SSCTTHHHHTTCEEEESCCEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHh-cCCHHHHHHCCCEEEeCCEEE
Confidence 5899999999999999999999997789999999999999999998653 345556 777888999999999998899
Q ss_pred EeecCCCCeEEecCCcEEecCeEEEecCCCCCcCCCCCCCC--cEEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHH
Q psy2951 1144 SDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAA 1221 (1466)
Q Consensus 1144 ~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~--~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a 1221 (1466)
.+ |+..++|.+.+|.++.||+||+|||++|+.|++| |.+ +++++++.+++.++++.+..+++++|||+|++|+|+|
T Consensus 82 ~i-d~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~ip-G~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A 159 (410)
T 3ef6_A 82 AL-DVQTRTISLDDGTTLSADAIVIATGSRARTMALP-GSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVA 159 (410)
T ss_dssp EE-ETTTTEEEETTSCEEECSEEEECCCEEECCCCCT-TTTSTTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHH
T ss_pred EE-ECCCCEEEECCCCEEECCEEEEccCCcccCCCCC-CccccceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHH
Confidence 99 9999999999999999999999999999999999 876 8999999999999998888899999999999999999
Q ss_pred HHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEee
Q psy2951 1222 AFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGI 1301 (1466)
Q Consensus 1222 ~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~ 1301 (1466)
..+++.|.+|+++++.++++.+.+++++.+.+.+.++++||+++++++|++++ . ++++..|++.||++++||.||+|+
T Consensus 160 ~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~-~~~~~~v~~~dg~~i~aD~Vv~a~ 237 (410)
T 3ef6_A 160 TTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFS-G-EGQLEQVMASDGRSFVADSALICV 237 (410)
T ss_dssp HHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEE-C-SSSCCEEEETTSCEEECSEEEECS
T ss_pred HHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEe-c-cCcEEEEEECCCCEEEcCEEEEee
Confidence 99999999999999999999888999999999999999999999999999998 3 346667999999999999999999
Q ss_pred ccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCCCCC
Q psy2951 1302 GTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTSL 1381 (1466)
Q Consensus 1302 G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~~~ 1381 (1466)
|..|++++++.+|+.++ +| |.||++++|+.|+|||+|||+.++... |.+.++++|..|..||+.||+||+|...+|
T Consensus 238 G~~p~~~l~~~~gl~~~-~g-i~vd~~~~t~~~~IyA~GD~a~~~~~~--g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~ 313 (410)
T 3ef6_A 238 GAEPADQLARQAGLACD-RG-VIVDHCGATLAKGVFAVGDVASWPLRA--GGRRSLETYMNAQRQAAAVAAAILGKNVSA 313 (410)
T ss_dssp CEEECCHHHHHTTCCBS-SS-EECCTTSBCSSTTEEECGGGEEEEBTT--SSEECCCCHHHHHHHHHHHHHHHTTCCCCC
T ss_pred CCeecHHHHHhCCCccC-Ce-EEEccCeeECCCCEEEEEcceeccCCC--CCeeeechHHHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999987 44 999999999999999999999988764 778899999999999999999999998899
Q ss_pred CCCccceeccccccEEEEeeCCCCceEEEcCCcCCceEEEEEEeCCEEEEEEEecCcHHHHHHHHHHHcCCCCChhcccc
Q psy2951 1382 STIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEALKFTAYYSNADKVLAILTVGMDPLAAQFAERIKMQKYIQKDQIEN 1461 (1466)
Q Consensus 1382 ~~~p~~w~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1461 (1466)
..+|||||+||+.+++++|...+.++++++|++++..|++||+++|+|+|++++|+++++..++++|+++.++++++|+|
T Consensus 314 ~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 393 (410)
T 3ef6_A 314 PQLPVSWTEIAGHRMQMAGDIEGPGDFVSRGMPGSGAALLFRLQERRIQAVVAVDAPRDFALATRLVEARAAIEPARLAD 393 (410)
T ss_dssp CBCCEEEEEETTEEEEEESCSSSSSEEEEESCTTSSSEEEEEEETTEEEEEEEESCHHHHHHHHHHHHHTCBCCHHHHHC
T ss_pred CCCCeeEEEECCceEEEEcCCCCCCEEEEEeeCCCCeEEEEEEECCEEEEEEEECChHHHHHHHHHHhCCCCCCHHHhcC
Confidence 99999999999999999999888889999999988999999999999999999999999999999999999999999976
Q ss_pred cCc
Q psy2951 1462 NAW 1464 (1466)
Q Consensus 1462 ~~~ 1464 (1466)
.+.
T Consensus 394 ~~~ 396 (410)
T 3ef6_A 394 LSN 396 (410)
T ss_dssp TTS
T ss_pred CCC
Confidence 653
No 4
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=9.8e-52 Score=500.37 Aligned_cols=393 Identities=28% Similarity=0.459 Sum_probs=359.6
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc---cCcccccccChhhhccCCcEEEcCCeE
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKADSILLRTEEFYKDNDIHVIKGKKI 1142 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~v 1142 (1466)
.++|||||||+||+++|..|++.|++.+|+|||++++.||.++++++.+. ...+.+.....+++++.+++++.+++|
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 46899999999999999999999987889999999999999999888654 233444455667888899999999999
Q ss_pred EEeecCCCCeEEecCCcEEecCeEEEecCCCCCcCCCCCCCC--c---EEEecCHHHHHhhhcccCCCCeEEEEcCCHHH
Q psy2951 1143 ISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN--K---VFYLRTVEDANNIAPHITPESNVVVIGSSFIG 1217 (1466)
Q Consensus 1143 ~~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~--~---v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g 1217 (1466)
+.+ ++..++|.+++|.++.||+||+|||++|+.+++| |.+ + ++++++.+++.++++.+..+++|+|||+|++|
T Consensus 84 ~~i-~~~~~~v~~~~g~~~~~d~lviAtG~~p~~~~i~-G~~~~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g 161 (431)
T 1q1r_A 84 TAI-NRDRQQVILSDGRALDYDRLVLATGGRPRPLPVA-SGAVGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIG 161 (431)
T ss_dssp EEE-ETTTTEEEETTSCEEECSEEEECCCEEECCCGGG-TTHHHHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHH
T ss_pred EEE-ECCCCEEEECCCCEEECCEEEEcCCCCccCCCCC-CcccCCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHH
Confidence 999 9988999999999999999999999999999998 876 6 99999999999999888889999999999999
Q ss_pred HHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEec--CCCcEEEEEcCCCCeeecC
Q psy2951 1218 MEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN--EKNDVTAANLDNGTTIPAD 1295 (1466)
Q Consensus 1218 ~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~--~~g~~~~v~l~~g~~i~~D 1295 (1466)
+|+|..|++.|.+|+++++.+.++++.+++++.+.+.+.+++.||+++++++|++++ . +++++..|.+.+|+++++|
T Consensus 162 ~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~~~~~~~v~~v~~~~G~~i~~D 240 (431)
T 1q1r_A 162 LEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFE-MSTDQQKVTAVLCEDGTRLPAD 240 (431)
T ss_dssp HHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEE-ECTTTCCEEEEEETTSCEEECS
T ss_pred HHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEE-eccCCCcEEEEEeCCCCEEEcC
Confidence 999999999999999999999998888899999999999999999999999999998 4 4567778999999999999
Q ss_pred EEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhc
Q psy2951 1296 LVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMV 1375 (1466)
Q Consensus 1296 ~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~ 1375 (1466)
.||+|+|..|++++++.+|+.++ +| |.||++++|+.|+|||+|||+..+.+. .|.+.++++|..|..||+.||+||+
T Consensus 241 ~Vv~a~G~~p~~~l~~~~gl~~~-~g-i~Vd~~~~ts~~~IyA~GD~~~~~~~~-~g~~~~~~~~~~A~~qg~~aa~~i~ 317 (431)
T 1q1r_A 241 LVIAGIGLIPNCELASAAGLQVD-NG-IVINEHMQTSDPLIMAVGDCARFHSQL-YDRWVRIESVPNALEQARKIAAILC 317 (431)
T ss_dssp EEEECCCEEECCHHHHHTTCCBS-SS-EECCTTSBCSSTTEEECGGGEEEEETT-TTEEEECCSHHHHHHHHHHHHHHHT
T ss_pred EEEECCCCCcCcchhhccCCCCC-CC-EEECCCcccCCCCEEEEEeEEEEcccc-CCceEeeCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999886 45 999999999999999999999987754 5788899999999999999999999
Q ss_pred CCCCCCCCCccceeccccccEEEEeeCCCCceEEEcCCcCCceEEEEEEeCCEEEEEEEecCcHHHHHHHHHHHcCCCCC
Q psy2951 1376 EKKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEALKFTAYYSNADKVLAILTVGMDPLAAQFAERIKMQKYIQ 1455 (1466)
Q Consensus 1376 g~~~~~~~~p~~w~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1455 (1466)
|...+|..+|||||++|+.+++++|.....++++++++++...|+++|.++|+|+|+.++|++.....++.+|+.+..++
T Consensus 318 g~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~g~~~~~~~~~~~i~~~~~~~ 397 (431)
T 1q1r_A 318 GKVPRDEAAPWFWSDQYEIGLKMVGLSEGYDRIIVRGSLAQPDFSVFYLQGDRVLAVDTVNRPVEFNQSKQIITDRLPVE 397 (431)
T ss_dssp TCCCCCCCCCEEEEEETTEEEEEEECCTTCSEEEEEEETTTTEEEEEEEETTEEEEEEEESCHHHHHHHHHHHHTTCCCC
T ss_pred CCCCCCCCCCeEEEEECCceEEEEeCCCCCCEEEEEccCCCCeEEEEEEeCCEEEEEEEECChHHHHHHHHHHHCCCCCC
Confidence 98888999999999999999999999888888999998877889999999999999999999999999999999999999
Q ss_pred hhcccccCc
Q psy2951 1456 KDQIENNAW 1464 (1466)
Q Consensus 1456 ~~~~~~~~~ 1464 (1466)
+++|.+..+
T Consensus 398 ~~~l~~~~~ 406 (431)
T 1q1r_A 398 PNLLGDESV 406 (431)
T ss_dssp HHHHTCTTS
T ss_pred HHHhhCCCC
Confidence 999877654
No 5
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.4e-52 Score=497.35 Aligned_cols=365 Identities=22% Similarity=0.372 Sum_probs=330.0
Q ss_pred CCCCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc--cCcccccccChhhhccCCcEEEcCC
Q psy2951 1063 SGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD--IKADSILLRTEEFYKDNDIHVIKGK 1140 (1466)
Q Consensus 1063 ~~~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~ 1140 (1466)
..++++|||||||+||++||..|+..+ .+|+|||+++++||.++++++.+. .+.+++..+..++++++++++++++
T Consensus 6 ~~~~~~~vIvGgG~AGl~aA~~L~~~~--~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~ 83 (385)
T 3klj_A 6 HHKSTKILILGAGPAGFSAAKAALGKC--DDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSE 83 (385)
T ss_dssp --CBCSEEEECCSHHHHHHHHHHTTTC--SCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSC
T ss_pred ccCCCCEEEEcCcHHHHHHHHHHhCCC--CEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCC
Confidence 345678999999999999999995444 499999999999999999999775 3556777788899999999999999
Q ss_pred eEEEeecCCCCeEEecCCcEEecCeEEEecCCCCCcCCCCCCCCcEEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHH
Q psy2951 1141 KIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEA 1220 (1466)
Q Consensus 1141 ~v~~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~ 1220 (1466)
+|++| |++.++|++++|+++.||+||||||++|+.|++| |.++++++++.+++.++++.+..+++|+|||+|++|+|+
T Consensus 84 ~V~~i-d~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~i~-G~~~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~ 161 (385)
T 3klj_A 84 FATSI-DPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVP-HADEIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIEL 161 (385)
T ss_dssp CEEEE-ETTTTEEEETTSCEEECSEEEECCCEEECCCCCT-TCSCEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHH
T ss_pred EEEEE-ECCCCEEEECCCCEEECCEEEEecCCCcCCCCCC-CCCCeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHH
Confidence 99999 9999999999999999999999999999999999 988999999999999999888778999999999999999
Q ss_pred HHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEe
Q psy2951 1221 AAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVG 1300 (1466)
Q Consensus 1221 a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a 1300 (1466)
|..|++.|.+|+++++.++++.+.+++++.+.+.+.++++||++++++.++++ |+++++|.||+|
T Consensus 162 A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i---------------g~~~~~D~vv~a 226 (385)
T 3klj_A 162 AQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM---------------GDLIRSSCVITA 226 (385)
T ss_dssp HHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC---------------HHHHHHSEEEEC
T ss_pred HHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc---------------CeEEecCeEEEC
Confidence 99999999999999999999998899999999999999999999998876544 568999999999
Q ss_pred eccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCCCC
Q psy2951 1301 IGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS 1380 (1466)
Q Consensus 1301 ~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~~ 1380 (1466)
+|..|++++++.+|+..+ +| |.||++++|+.|+|||+|||+.++... ..+|..|..||+.||+||+|...+
T Consensus 227 ~G~~p~~~~~~~~gl~~~-~g-i~vd~~~~t~~~~IyA~GD~a~~~~~~-------~~~~~~A~~qg~~aa~~i~g~~~~ 297 (385)
T 3klj_A 227 VGVKPNLDFIKDTEIASK-RG-ILVNDHMETSIKDIYACGDVAEFYGKN-------PGLINIANKQGEVAGLNACGEDAS 297 (385)
T ss_dssp CCEEECCGGGTTSCCCBS-SS-EEECTTCBCSSTTEEECGGGEEETTBC-------CCCHHHHHHHHHHHHHHHTTCCCC
T ss_pred cCcccChhhhhhcCCCcC-CC-EEECCCcccCCCCEEEEEeeEecCCCc-------ccHHHHHHHHHHHHHHHhcCCCcC
Confidence 999999999999999876 44 999999999999999999999987542 347999999999999999998888
Q ss_pred CCC-CccceeccccccEEEEeeCCCC-ceEEEcCCcCCceEEEEEEeCCEEEEEEEecCcHHHHHHHHHHHcCCCCCh
Q psy2951 1381 LST-IPFFWTMLFGVGFRFAGYAAGH-TQVDIVGDLEALKFTAYYSNADKVLAILTVGMDPLAAQFAERIKMQKYIQK 1456 (1466)
Q Consensus 1381 ~~~-~p~~w~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1456 (1466)
|.. +||||+++|+.+++++|..... ++.+++ ++++..|++||+++|+|+|++++|++++...++++|+++..++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~g~~~~g~~~~~~~~~~~i~~~~~~~~ 374 (385)
T 3klj_A 298 YSEIIPSPILKVSGISIISCGDIENNKPSKVFR-STQEDKYIVCMLKENKIDAAAVIGDVSLGTKLKKAIDSSKSFDN 374 (385)
T ss_dssp CCCCCCCCEEEETTEEEEEESCCTTCCCSEEEE-EECSSCEEEEEEETTEEEEEEEESCHHHHHHHHHHHHTTCBCSC
T ss_pred CCCCCCcEEEEeCCCcEEEEcCCCCCCCeEEEE-ECCCCeEEEEEEECCEEEEEEEECCcHHHHHHHHHHHcCCCccc
Confidence 876 6999999999999999997654 566666 77788899999999999999999999999999999999976653
No 6
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=1.7e-50 Score=486.22 Aligned_cols=384 Identities=25% Similarity=0.409 Sum_probs=348.1
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc-c-CcccccccChhhhccCCcEEEcCCeEE
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD-I-KADSILLRTEEFYKDNDIHVIKGKKII 1143 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~-~-~~~~~~~~~~~~~~~~~v~~~~~~~v~ 1143 (1466)
.++|||||||+||+++|..|++.|++.+|+|||++++.||.++++++.+. . ..+.+.++ ++.+.+++++.+++|+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~v~ 83 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLD---CKRAPEVEWLLGVTAQ 83 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGSBCC---CTTSCSCEEEETCCEE
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCchhhhhHH---HHHHCCCEEEcCCEEE
Confidence 46899999999999999999999997789999999999999999887553 1 12333232 6778899999999999
Q ss_pred EeecCCCCeEEecCCcEEecCeEEEecCCCCCcCCC-CCCCC-cEEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHH
Q psy2951 1144 SDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQ-ADGVN-KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAA 1221 (1466)
Q Consensus 1144 ~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~-~~g~~-~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a 1221 (1466)
.+ |+..++|.+++|.++.||+||+|||++|+.|++ | |.+ +++++++.+++.++++.+..+++|+|||+|++|+|+|
T Consensus 84 ~i-~~~~~~v~~~~g~~~~~d~lviAtG~~~~~~~i~~-G~~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A 161 (408)
T 2gqw_A 84 SF-DPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQ-GATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELA 161 (408)
T ss_dssp EE-ETTTTEEEETTSCEEECSEEEECCCEEECCCGGGT-TCSSCEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHH
T ss_pred EE-ECCCCEEEECCCCEEECCEEEECCCCCCCCCCccC-CCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHH
Confidence 99 999999999999999999999999999999998 8 886 8999999999999988888899999999999999999
Q ss_pred HHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEee
Q psy2951 1222 AFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGI 1301 (1466)
Q Consensus 1222 ~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~ 1301 (1466)
..|++.|.+|+++++.+.++++.+++++.+.+.+.++++||+++++++|++++ + + .|.+.+|+++++|.||+|+
T Consensus 162 ~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~-~---~v~~~~g~~i~~D~vi~a~ 235 (408)
T 2gqw_A 162 ATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV--D-G---VVLLDDGTRIAADMVVVGI 235 (408)
T ss_dssp HHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE--T-T---EEEETTSCEEECSEEEECS
T ss_pred HHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE--C-C---EEEECCCCEEEcCEEEECc
Confidence 99999999999999999999878899999999999999999999999999997 2 2 5788999999999999999
Q ss_pred ccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCCC-C
Q psy2951 1302 GTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT-S 1380 (1466)
Q Consensus 1302 G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~-~ 1380 (1466)
|..|++++++.+|+..+ +| |.||++++|+.|+|||+|||+..+.+. .|.+.++++|..|..||+.||+||+|... +
T Consensus 236 G~~p~~~l~~~~gl~~~-~g-i~Vd~~~~t~~~~IyA~GD~~~~~~~~-~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~ 312 (408)
T 2gqw_A 236 GVLANDALARAAGLACD-DG-IFVDAYGRTTCPDVYALGDVTRQRNPL-SGRFERIETWSNAQNQGIAVARHLVDPTAPG 312 (408)
T ss_dssp CEEECCHHHHHHTCCBS-SS-EECCTTCBCSSTTEEECGGGEEEEETT-TTEEECCCCHHHHHHHHHHHHHHHHCTTSCC
T ss_pred CCCccHHHHHhCCCCCC-CC-EEECCCCccCCCCEEEEEEEEEecCcc-CCceeeccHHHHHHHHHHHHHHHhcCCCCCc
Confidence 99999999999999886 55 999999999999999999999987654 57788899999999999999999999887 8
Q ss_pred CCCCccceeccccccEEEEeeCCCCceEEEcCCcC--CceEEEEEEeCCEEEEEEEecCcHHHHHHHHHHHcCCCCChhc
Q psy2951 1381 LSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLE--ALKFTAYYSNADKVLAILTVGMDPLAAQFAERIKMQKYIQKDQ 1458 (1466)
Q Consensus 1381 ~~~~p~~w~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1458 (1466)
|..+||||+++|+.+++++|. ...++++++++++ ...|.++|.++++|+|+.++|...++..++++|+.+..+++.+
T Consensus 313 ~~~~p~~~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~g~~~~~~~~~~~i~~~~~~~~~~ 391 (408)
T 2gqw_A 313 YAELPWYWSDQGALRIQVAGL-ASGDEEIVRGEVSLDAPKFTLIELQKGRIVGATCVNNARDFAPLRRLLAVGAKPDRAA 391 (408)
T ss_dssp CCCCCEEEEEETTEEEEEEEC-SCCSEEEEESCCCSSSCCEEEEEEETTEEEEEEEESCHHHHHHHHHHHHTTCCCCHHH
T ss_pred CCCCCeEEEEECCceEEEECC-CCCCEEEEEccCCCCCCeEEEEEEeCCEEEEEEEECChHHHHHHHHHHHCCCCCChHH
Confidence 999999999999999999999 7678888899876 6779999999999999999999999999999999999999998
Q ss_pred ccccCc
Q psy2951 1459 IENNAW 1464 (1466)
Q Consensus 1459 ~~~~~~ 1464 (1466)
|.|..+
T Consensus 392 l~~~~~ 397 (408)
T 2gqw_A 392 LADPAT 397 (408)
T ss_dssp HHCTTC
T ss_pred hcCCCC
Confidence 866553
No 7
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=1.2e-49 Score=489.87 Aligned_cols=384 Identities=21% Similarity=0.312 Sum_probs=320.9
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhccC-----------------cccccccChh
Q psy2951 1065 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIK-----------------ADSILLRTEE 1127 (1466)
Q Consensus 1065 ~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~~~-----------------~~~~~~~~~~ 1127 (1466)
..++|||||||+||++||..|++.++..+|+|||+++++||.++++++.+... ...+.+++.+
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPS 89 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGG
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchH
Confidence 34689999999999999999999866679999999999999999998876311 1112223333
Q ss_pred hhc---------cCCcEEEcCCeEEEeecCCCCeEEecCCcEEecCeEEEecCCCCCcCCCCCCC------CcEEEecCH
Q psy2951 1128 FYK---------DNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGV------NKVFYLRTV 1192 (1466)
Q Consensus 1128 ~~~---------~~~v~~~~~~~v~~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~------~~v~~~~~~ 1192 (1466)
++. +.+++++++++|+.+ |+..++|.+++|+++.||+||||||++|+.++++ |. ++++++++.
T Consensus 90 ~~~~~~~l~~~~~~gv~~~~g~~v~~i-d~~~~~V~~~~g~~i~yd~lviATGs~p~~~~~~-~~~~~~~~~~v~~~~~~ 167 (493)
T 1m6i_A 90 FYVSAQDLPHIENGGVAVLTGKKVVQL-DVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAI-DRAGAEVKSRTTLFRKI 167 (493)
T ss_dssp GSBCTTTTTTSTTCEEEEEETCCEEEE-EGGGTEEEETTSCEEEEEEEEECCCEEECCCHHH-HTSCHHHHHTEEECCSH
T ss_pred hhcchhhhhhhhcCCeEEEcCCEEEEE-ECCCCEEEECCCCEEECCEEEECCCCCCCCCCCc-ccccccccCceEEEcCH
Confidence 332 468999999889999 9989999999999999999999999999988765 42 278999999
Q ss_pred HHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhc----CCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCc
Q psy2951 1193 EDANNIAPHITPESNVVVIGSSFIGMEAAAFCAS----KVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKA 1268 (1466)
Q Consensus 1193 ~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~----~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~ 1268 (1466)
+++.++++.+..+++|+|||+|++|+|+|..|++ .|.+|+++++.+.++.+.+++.+.+.+.+.++++||++++++
T Consensus 168 ~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~ 247 (493)
T 1m6i_A 168 GDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNA 247 (493)
T ss_dssp HHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSC
T ss_pred HHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCC
Confidence 9999888777779999999999999999999876 478999999998888888999999999999999999999999
Q ss_pred eEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCccccccCCceeeC-CCeEEeCCCccccCCCEEEecccccCCC
Q psy2951 1269 NVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNG-QKAVVVNEYLETNVPGVYAGGDIAYAPL 1347 (1466)
Q Consensus 1269 ~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~-~G~i~vd~~~~t~~~~v~a~GD~a~~p~ 1347 (1466)
+|++++ .+++. ..|.+.+|++++||.||+|+|..|++++++.+|+.++. +|+|.||+++|| .|+|||+|||+.++.
T Consensus 248 ~V~~i~-~~~~~-~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~~ggi~Vd~~l~t-~~~IyA~GD~a~~~~ 324 (493)
T 1m6i_A 248 IVQSVG-VSSGK-LLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQA-RSNIWVAGDAACFYD 324 (493)
T ss_dssp CEEEEE-EETTE-EEEEETTSCEEEESEEEECCCEEECCTTHHHHTCCBCTTTCSEECCTTCEE-ETTEEECGGGEEEEE
T ss_pred EEEEEE-ecCCe-EEEEECCCCEEECCEEEECCCCCccHHHHHHcCCccccCCCcEEECCCccc-CCCeeEeeeeEeccC
Confidence 999997 33333 46889999999999999999999999999999999885 578999999998 599999999999876
Q ss_pred ccCCCceeeeecHHHHHHHHHHHHHHhcCCCCCCCCCccceeccc-----------cccEEEEeeCCC---CceE-----
Q psy2951 1348 HSFYNKNASIGHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTMLF-----------GVGFRFAGYAAG---HTQV----- 1408 (1466)
Q Consensus 1348 ~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~~~~~~p~~w~~~~-----------~~~~~~~g~~~~---~~~~----- 1408 (1466)
.. .|. .+++||.+|..||+.||+||+|...+|.+.|||||+|+ +.+++.+|.... .++.
T Consensus 325 ~~-~g~-~~~~~~~~A~~qg~~aa~ni~g~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~G~~~~~~~~~~~~~~~~ 402 (493)
T 1m6i_A 325 IK-LGR-RRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSATE 402 (493)
T ss_dssp TT-TEE-ECCCCHHHHHHHHHHHHHHHTSCCCCCCCCCEEEEESSTTCEEEEEECCCTTSCEEEEEECCCTTCSHHHHHH
T ss_pred cc-cCc-cccchHHHHHHHHHHHHHHhcCCCCCcCCcCceeeeeccCcceEEEeccCCCcceEEeecccccccccccccc
Confidence 54 243 37889999999999999999999899999999999998 445555554211 1110
Q ss_pred ----EEc-------------------CC-------cCCceEEEEEEeCCEEEEEEEecCcHHHHHHHHHHHcCCCCC
Q psy2951 1409 ----DIV-------------------GD-------LEALKFTAYYSNADKVLAILTVGMDPLAAQFAERIKMQKYIQ 1455 (1466)
Q Consensus 1409 ----~~~-------------------~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1455 (1466)
.++ |+ ....+|++||++||+|+|++++|+++++..+|++|+++..++
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~~~~ 479 (493)
T 1m6i_A 403 QSGTGIRSESETESEASEITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVLWNIFNRMPIARKIIKDGEQHE 479 (493)
T ss_dssp HHSCSCHHHHSCSCCCC--------------------CCEEEEEEEETTEEEEEEEESCCSCHHHHHHHHHHCCBCS
T ss_pred cccccccccccccccccccccccccccccccccccccCCcEEEEEEeCCEEEEEEEecCcchHHHHHHHHhCCCCCC
Confidence 011 11 124668999999999999999999999999999999997664
No 8
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=3.9e-45 Score=442.48 Aligned_cols=375 Identities=29% Similarity=0.447 Sum_probs=336.7
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc---cCcccccccCHhHhhhCCcEEEEceE
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKADSILLRTEEFYKDNDIHVIKGKK 670 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~gv~~~~~~~ 670 (1466)
.+++|+|||||+||++||..|+++|++.+|+++++++.++|..+.++..+- .....+..+..+++.+.+++++.+++
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 87 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAE 87 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCE
Confidence 468999999999999999999999999899999999999998877764332 35566777788889999999999988
Q ss_pred EEEeccccccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCC--cEEEecCHHHHHhhcccCCC-CCcEEEECCChHHH
Q psy2951 671 IISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHITP-ESNVVVIGSSFIGM 747 (1466)
Q Consensus 671 v~~i~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~-~~~vvVvG~G~~g~ 747 (1466)
|..+ +...+.+.+.++..+.||+||||||++|+.|+++ |.+ +++++++.+++..+...+.. +++++|||+|++|+
T Consensus 88 v~~i-d~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~-g~~~~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~ 165 (415)
T 3lxd_A 88 VVSL-DPAAHTVKLGDGSAIEYGKLIWATGGDPRRLSCV-GADLAGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGL 165 (415)
T ss_dssp EEEE-ETTTTEEEETTSCEEEEEEEEECCCEECCCCBTT-SSCCBTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHH
T ss_pred EEEE-ECCCCEEEECCCCEEEeeEEEEccCCccCCCCCC-CccccCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHH
Confidence 9999 8889999999999999999999999999999998 865 78888999998888776666 89999999999999
Q ss_pred HHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEE
Q psy2951 748 EAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 827 (1466)
Q Consensus 748 e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi 827 (1466)
|+|..|++.|.+|+++++.+.++...+++++.+.+.+.++++||++++++.+++++. +++++..+.+++|+++++|.||
T Consensus 166 e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~v~l~dG~~i~aD~Vv 244 (415)
T 3lxd_A 166 EAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEG-DGTKVTGVRMQDGSVIPADIVI 244 (415)
T ss_dssp HHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEE-SSSBEEEEEESSSCEEECSEEE
T ss_pred HHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEE
Confidence 999999999999999999999887778999999999999999999999999999984 4567778999999999999999
Q ss_pred EccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCC
Q psy2951 828 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK 907 (1466)
Q Consensus 828 ~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~ 907 (1466)
+|+|.+|++++++.+|++.+ +| |.||++++|+.|+|||+|||+..+...+.|.+.++++|+.|..||+.||+||+|+.
T Consensus 245 ~a~G~~p~~~l~~~~gl~~~-~g-i~vd~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 322 (415)
T 3lxd_A 245 VGIGIVPCVGALISAGASGG-NG-VDVDEFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAP 322 (415)
T ss_dssp ECSCCEESCHHHHHTTCCCS-SS-EECCTTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCC
T ss_pred ECCCCccChHHHHhCCCCcC-CC-EEECCCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999887 45 99999999999999999999998875532677888999999999999999999998
Q ss_pred CcCcccCeeeeeecCceeEEeeccCCCCceeEecccccceEEEEEecCCeEEEEEeecCchhhhhh
Q psy2951 908 TSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEALKFTAYYSNADKVLAILTVGMDPLAAQF 973 (1466)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~g~~~~~~~~ 973 (1466)
..|+.+|+||+.+|+..+++.|...+.++.+..++.+...|.++++++++++|+..+|........
T Consensus 323 ~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 388 (415)
T 3lxd_A 323 VPYKATPWFWSNQYDLKLQTVGLSTGHDNAVLRGDPATRSFSVVYLKGGKVVALDCVNMVKDYVQG 388 (415)
T ss_dssp CCCCCCCEEEEEETTEEEEEEECCTTCSEEEEEEEGGGTEEEEEEEETTEEEEEEEESCHHHHHHH
T ss_pred CCCCCCCeeEeeeCCcEEEEEeCCCCCCEEEEEecCCCCeEEEEEEECCEEEEEEEECChHHHHHH
Confidence 889999999999999999999998877777777777788899999999999999999988655443
No 9
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=7.1e-45 Score=438.15 Aligned_cols=370 Identities=26% Similarity=0.409 Sum_probs=331.2
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc---cCcccccccCHhHhhhCCcEEEEceEE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKADSILLRTEEFYKDNDIHVIKGKKI 671 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~gv~~~~~~~v 671 (1466)
+++|+|||||+||++||..|+++|++.+|+++++++.++|..+.++..+. ...+.+ .+..+++.+.+++++.+++|
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~-~~~~~~~~~~~i~~~~~~~v 80 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPI-LAEADWYGEARIDMLTGPEV 80 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCB-SSCTTHHHHTTCEEEESCCE
T ss_pred CCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHh-cCCHHHHHHCCCEEEeCCEE
Confidence 36899999999999999999999999999999999999998887775332 345555 66778888999999999889
Q ss_pred EEeccccccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCC--cEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHH
Q psy2951 672 ISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEA 749 (1466)
Q Consensus 672 ~~i~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~ 749 (1466)
+.+ +...+.+.+.+++++.||+||||||++|+.|++| |.+ +++++++.+++..+.+.+..+++++|||+|++|+|+
T Consensus 81 ~~i-d~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~ip-G~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~ 158 (410)
T 3ef6_A 81 TAL-DVQTRTISLDDGTTLSADAIVIATGSRARTMALP-GSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEV 158 (410)
T ss_dssp EEE-ETTTTEEEETTSCEEECSEEEECCCEEECCCCCT-TTTSTTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHH
T ss_pred EEE-ECCCCEEEECCCCEEECCEEEEccCCcccCCCCC-CccccceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHH
Confidence 999 8888999999999999999999999999999998 865 788899999998888777789999999999999999
Q ss_pred HHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEc
Q psy2951 750 AAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVG 829 (1466)
Q Consensus 750 A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a 829 (1466)
|..|++.|.+|+++++.+.++...+++++.+.+.+.++++||++++++.+++++. ++++..+.+++|+++++|.||+|
T Consensus 159 A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~~dg~~i~aD~Vv~a 236 (410)
T 3ef6_A 159 ATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSG--EGQLEQVMASDGRSFVADSALIC 236 (410)
T ss_dssp HHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEEC--SSSCCEEEETTSCEEECSEEEEC
T ss_pred HHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEec--cCcEEEEEECCCCEEEcCEEEEe
Confidence 9999999999999999998887778999999999999999999999999999984 33556788999999999999999
Q ss_pred cccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCCCc
Q psy2951 830 IGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS 909 (1466)
Q Consensus 830 ~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~~~ 909 (1466)
+|.+|++++++.+|++++ +| |.||++++|+.|+|||+|||+..+... +.+.++++|..|..||+.||++|+++...
T Consensus 237 ~G~~p~~~l~~~~gl~~~-~g-i~vd~~~~t~~~~IyA~GD~a~~~~~~--g~~~~~~~~~~A~~qg~~aa~~i~g~~~~ 312 (410)
T 3ef6_A 237 VGAEPADQLARQAGLACD-RG-VIVDHCGATLAKGVFAVGDVASWPLRA--GGRRSLETYMNAQRQAAAVAAAILGKNVS 312 (410)
T ss_dssp SCEEECCHHHHHTTCCBS-SS-EECCTTSBCSSTTEEECGGGEEEEBTT--SSEECCCCHHHHHHHHHHHHHHHTTCCCC
T ss_pred eCCeecHHHHHhCCCccC-Ce-EEEccCeeECCCCEEEEEcceeccCCC--CCeeeechHHHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999887 44 999999999999999999999987653 56677889999999999999999999889
Q ss_pred CcccCeeeeeecCceeEEeeccCCCCceeEecccccceEEEEEecCCeEEEEEeecCchhhhhh
Q psy2951 910 LSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEALKFTAYYSNADKVLAILTVGMDPLAAQF 973 (1466)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~g~~~~~~~~ 973 (1466)
|+.+|+||+.+|+.++.+.|.....++.+..++.+...|.+++.++++++|+..+|........
T Consensus 313 ~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 376 (410)
T 3ef6_A 313 APQLPVSWTEIAGHRMQMAGDIEGPGDFVSRGMPGSGAALLFRLQERRIQAVVAVDAPRDFALA 376 (410)
T ss_dssp CCBCCEEEEEETTEEEEEESCSSSSSEEEEESCTTSSSEEEEEEETTEEEEEEEESCHHHHHHH
T ss_pred CCCCCeeEEEECCceEEEEcCCCCCCEEEEEeeCCCCeEEEEEEECCEEEEEEEECChHHHHHH
Confidence 9999999999999999999998877777777777778899999999999999999997655443
No 10
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.4e-44 Score=435.58 Aligned_cols=372 Identities=27% Similarity=0.457 Sum_probs=333.7
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc---cCcccccccCHhHhhhCCcEEEEceEE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKADSILLRTEEFYKDNDIHVIKGKKI 671 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~gv~~~~~~~v 671 (1466)
+++|+|||||+||++||..|+++|++.+|+++++++.++|..+.++..+- .....+..+..+++.+.+++++. ++|
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v 79 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRM 79 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCE
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEE
Confidence 37899999999999999999999997789999999999998877764332 34566777788889999999999 779
Q ss_pred EEeccccccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCC--cEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHH
Q psy2951 672 ISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEA 749 (1466)
Q Consensus 672 ~~i~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~ 749 (1466)
+.+ +...+.+.+.++.++.||+||+|||++|+.|++| |.+ +++++++.+++..+...+..+++++|||+|++|+|+
T Consensus 80 ~~i-d~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~i~-g~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~ 157 (404)
T 3fg2_P 80 VSI-DREGRKLLLASGTAIEYGHLVLATGARNRMLDVP-NASLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEF 157 (404)
T ss_dssp EEE-ETTTTEEEESSSCEEECSEEEECCCEEECCCCST-TTTSTTEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHH
T ss_pred EEE-ECCCCEEEECCCCEEECCEEEEeeCCCccCCCCC-CCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHH
Confidence 999 8888999999999999999999999999999998 865 788889999998887777779999999999999999
Q ss_pred HHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEc
Q psy2951 750 AAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVG 829 (1466)
Q Consensus 750 A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a 829 (1466)
|..+++.|.+|+++++.+.++...+++++.+.+.+.++++||++++++++++++. +++++..+.+++|+++++|.||+|
T Consensus 158 A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~V~~~dG~~i~aD~Vv~a 236 (404)
T 3fg2_P 158 AATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAA-EGDRVTGVVLSDGNTLPCDLVVVG 236 (404)
T ss_dssp HHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSEEEEC
T ss_pred HHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEEC
Confidence 9999999999999999998887778999999999999999999999999999984 345677899999999999999999
Q ss_pred cccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCCCc
Q psy2951 830 IGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS 909 (1466)
Q Consensus 830 ~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~~~ 909 (1466)
+|++|++++++.+|+.++ +| |.+|++++|+.|+|||+|||+..+... .|.+.++++|+.|..||+.||++|+|+...
T Consensus 237 ~G~~p~~~l~~~~gl~~~-~G-i~vd~~~~t~~~~iya~GD~a~~~~~~-~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~ 313 (404)
T 3fg2_P 237 VGVIPNVEIAAAAGLPTA-AG-IIVDQQLLTSDPHISAIGDCALFESVR-FGETMRVESVQNATDQARCVAARLTGDAKP 313 (404)
T ss_dssp CCEEECCHHHHHTTCCBS-SS-EEECTTSBCSSTTEEECGGGEEEEETT-TTEEECCCSHHHHHHHHHHHHHHTTTCCCC
T ss_pred cCCccCHHHHHhCCCCCC-CC-EEECCCcccCCCCEEEeecceeecCcc-CCceeeehHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999887 45 999999999999999999999987654 466778889999999999999999999888
Q ss_pred CcccCeeeeeecCceeEEeeccCCCCceeEecccccceEEEEEecCCeEEEEEeecCchhhhhh
Q psy2951 910 LSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEALKFTAYYSNADKVLAILTVGMDPLAAQF 973 (1466)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~g~~~~~~~~ 973 (1466)
|+.+|+||+.+|+..+++.|.....++.+..++.+...|.++++++++++|+..+|........
T Consensus 314 ~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 377 (404)
T 3fg2_P 314 YDGYPWFWSDQGDDKLQIVGLTAGFDQVVIRGSVAERSFSAFCYKAGKLIGIESVNRAADHVFG 377 (404)
T ss_dssp CCCCCEEEEEETTEEEEEEECCTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEESCHHHHHHH
T ss_pred CCCCCceEeEECCcEEEEEeCCCCCCEEEEEecCCCCcEEEEEEECCEEEEEEEeCCHHHHHHH
Confidence 9999999999999999999998877777777777788899999999999999999988655443
No 11
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.2e-44 Score=427.67 Aligned_cols=354 Identities=21% Similarity=0.295 Sum_probs=299.9
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc--cCcccccccChhhhccCCcEEEcCCeEE
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD--IKADSILLRTEEFYKDNDIHVIKGKKII 1143 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~v~ 1143 (1466)
..++||||||+||++||..|++.| +|+|||++++.+|.++.+++.+. ...+.+..+..+++++.+++++.+++|+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g---~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~ 84 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY---EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAK 84 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS---EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEE
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC---CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEE
Confidence 358999999999999999999987 99999999999998888877653 3445555566778888899999998899
Q ss_pred EeecCCCCeEEecCCcEEecCeEEEecCCCCCcCCCCCCCCcEEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHH
Q psy2951 1144 SDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAF 1223 (1466)
Q Consensus 1144 ~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~ 1223 (1466)
.+ |+..+.|. .++.++.||+||||||++|+.|++| |.++++++++.+++.++++.+.++++++|||+|++|+|+|..
T Consensus 85 ~i-d~~~~~V~-~~g~~~~~d~lViATGs~p~~p~i~-G~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~ 161 (367)
T 1xhc_A 85 LI-DRGRKVVI-TEKGEVPYDTLVLATGARAREPQIK-GKEYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGN 161 (367)
T ss_dssp EE-ETTTTEEE-ESSCEEECSEEEECCCEEECCCCSB-TGGGEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHH
T ss_pred EE-ECCCCEEE-ECCcEEECCEEEECCCCCCCCCCCC-CcCCEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHH
Confidence 99 99989888 7888999999999999999999999 866899899999999888776667999999999999999999
Q ss_pred HhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeecc
Q psy2951 1224 CASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGT 1303 (1466)
Q Consensus 1224 l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~ 1303 (1466)
|++.|.+|+++++.+++++ +++++.+.+.+.++++||+++++++|++++ . + .|.+++|+ +++|.||+|+|.
T Consensus 162 l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~-~-~----~v~~~~g~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 162 LAEAGYHVKLIHRGAMFLG--LDEELSNMIKDMLEETGVKFFLNSELLEAN-E-E----GVLTNSGF-IEGKVKICAIGI 232 (367)
T ss_dssp HHHTTCEEEEECSSSCCTT--CCHHHHHHHHHHHHHTTEEEECSCCEEEEC-S-S----EEEETTEE-EECSCEEEECCE
T ss_pred HHhCCCEEEEEeCCCeecc--CCHHHHHHHHHHHHHCCCEEEcCCEEEEEE-e-e----EEEECCCE-EEcCEEEECcCC
Confidence 9999999999999998887 899999999999999999999999999996 2 2 37788887 999999999999
Q ss_pred ccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCCCCCCC
Q psy2951 1304 VLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTSLST 1383 (1466)
Q Consensus 1304 ~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~~~~~ 1383 (1466)
.|++++++..|+..+ +| |.||+++||+.|+|||+|||+..+... ...|..|..||+.||+||+|...+|..
T Consensus 233 ~p~~~ll~~~gl~~~-~g-i~Vd~~~~t~~~~IyA~GD~a~~~~~~-------~~~~~~A~~qg~~aa~~i~g~~~~~~~ 303 (367)
T 1xhc_A 233 VPNVDLARRSGIHTG-RG-ILIDDNFRTSAKDVYAIGDCAEYSGII-------AGTAKAAMEQARVLADILKGEPRRYNF 303 (367)
T ss_dssp EECCHHHHHTTCCBS-SS-EECCTTSBCSSTTEEECGGGEEBTTBC-------CCSHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred CcCHHHHHhCCCCCC-CC-EEECCCcccCCCCEEEeEeeeecCCCC-------ccHHHHHHHHHHHHHHHhcCCCccCCC
Confidence 999999999999876 45 999999999999999999999764321 246899999999999999998777877
Q ss_pred Cccce-eccccccEEEEeeCCCCceEEEcCCcCCceEEEEEEeCCEEEEEEEecCcHHHHHHHHHHHc
Q psy2951 1384 IPFFW-TMLFGVGFRFAGYAAGHTQVDIVGDLEALKFTAYYSNADKVLAILTVGMDPLAAQFAERIKM 1450 (1466)
Q Consensus 1384 ~p~~w-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1450 (1466)
.+++| ..+++..+..+|..+..... + ..|+++++++++++|+.++|...++..++++|.+
T Consensus 304 ~~~~~~~~~~~~~~~~vG~~~~~~~~-~------~~~~k~~~~~~~ilG~~~~g~~~~~~~~~~~i~~ 364 (367)
T 1xhc_A 304 KFRSTVFKFGKLQIAIIGNTKGEGKW-I------EDNTKVFYENGKIIGAVVFNDIRKATKLEKEILD 364 (367)
T ss_dssp SCCEEEEEETTEEEEEEECCSSCEEE-E------ETTEEEEC-----CEEEEESCHHHHHHHC-----
T ss_pred CCCceEEEECCceEEEECCCCCCCcc-c------ceEEEEEEECCEEEEEEEECChHHHHHHHHHHhh
Confidence 66665 57899999999987653321 1 3478888889999999999999999999998744
No 12
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=7.8e-44 Score=422.27 Aligned_cols=351 Identities=22% Similarity=0.377 Sum_probs=307.4
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc--cCcccccccCHhHhhhCCcEEEEce
Q psy2951 592 SGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD--IKADSILLRTEEFYKDNDIHVIKGK 669 (1466)
Q Consensus 592 ~~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~gv~~~~~~ 669 (1466)
..++++|+|||||+||++||..|++.+ .+|+++++++.++|..+.++..+. .+.+++..+..+++++.++++++++
T Consensus 6 ~~~~~~~vIvGgG~AGl~aA~~L~~~~--~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~ 83 (385)
T 3klj_A 6 HHKSTKILILGAGPAGFSAAKAALGKC--DDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSE 83 (385)
T ss_dssp --CBCSEEEECCSHHHHHHHHHHTTTC--SCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSC
T ss_pred ccCCCCEEEEcCcHHHHHHHHHHhCCC--CEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCC
Confidence 345789999999999999999995444 459999999999998888877654 4566778888899999999999999
Q ss_pred EEEEeccccccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHH
Q psy2951 670 KIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEA 749 (1466)
Q Consensus 670 ~v~~i~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~ 749 (1466)
+|+.+ |.+.+++++++++++.||+||||||++|+.|++| |.++++++++.+++..+.+.+..+++|+|||+|++|+|+
T Consensus 84 ~V~~i-d~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~i~-G~~~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~ 161 (385)
T 3klj_A 84 FATSI-DPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVP-HADEIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIEL 161 (385)
T ss_dssp CEEEE-ETTTTEEEETTSCEEECSEEEECCCEEECCCCCT-TCSCEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHH
T ss_pred EEEEE-ECCCCEEEECCCCEEECCEEEEecCCCcCCCCCC-CCCCeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHH
Confidence 89999 9999999999999999999999999999999999 888888899999998887766668999999999999999
Q ss_pred HHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEc
Q psy2951 750 AAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVG 829 (1466)
Q Consensus 750 A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a 829 (1466)
|..|++.|.+||++++.+.++...+++++.+.+.+.+++.||+++++..++++ |+++++|.||+|
T Consensus 162 A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i---------------g~~~~~D~vv~a 226 (385)
T 3klj_A 162 AQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM---------------GDLIRSSCVITA 226 (385)
T ss_dssp HHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC---------------HHHHHHSEEEEC
T ss_pred HHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc---------------CeEEecCeEEEC
Confidence 99999999999999999998877789999999999999999999998877654 567899999999
Q ss_pred cccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCCCc
Q psy2951 830 IGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS 909 (1466)
Q Consensus 830 ~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~~~ 909 (1466)
+|++|++++++.+|++.+ +| |.||++++|+.|+|||+|||+..+... +++|..|..||+.||.+|+++...
T Consensus 227 ~G~~p~~~~~~~~gl~~~-~g-i~vd~~~~t~~~~IyA~GD~a~~~~~~-------~~~~~~A~~qg~~aa~~i~g~~~~ 297 (385)
T 3klj_A 227 VGVKPNLDFIKDTEIASK-RG-ILVNDHMETSIKDIYACGDVAEFYGKN-------PGLINIANKQGEVAGLNACGEDAS 297 (385)
T ss_dssp CCEEECCGGGTTSCCCBS-SS-EEECTTCBCSSTTEEECGGGEEETTBC-------CCCHHHHHHHHHHHHHHHTTCCCC
T ss_pred cCcccChhhhhhcCCCcC-CC-EEECCCcccCCCCEEEEEeeEecCCCc-------ccHHHHHHHHHHHHHHHhcCCCcC
Confidence 999999999999999876 44 999999999999999999999876432 247889999999999999998888
Q ss_pred Ccc-cCeeeeeecCceeEEeeccCCC-CceeEecccccceEEEEEecCCeEEEEEeecCchhhh
Q psy2951 910 LST-IPFFWTMLFGVGFRFAGYAAGH-TQVDIVGDLEALKFTAYYSNADKVLAILTVGMDPLAA 971 (1466)
Q Consensus 910 ~~~-~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~g~~~~~~ 971 (1466)
+.. +|++|+.+|+..+.++|..+.. .+.+.. +.++..|.++++++++++|+..+|......
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~g~~~~g~~~~~~ 360 (385)
T 3klj_A 298 YSEIIPSPILKVSGISIISCGDIENNKPSKVFR-STQEDKYIVCMLKENKIDAAAVIGDVSLGT 360 (385)
T ss_dssp CCCCCCCCEEEETTEEEEEESCCTTCCCSEEEE-EECSSCEEEEEEETTEEEEEEEESCHHHHH
T ss_pred CCCCCCcEEEEeCCCcEEEEcCCCCCCCeEEEE-ECCCCeEEEEEEECCEEEEEEEECCcHHHH
Confidence 876 6999999999999999988754 333433 556778999999999999999999986554
No 13
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=2.1e-42 Score=418.57 Aligned_cols=371 Identities=29% Similarity=0.484 Sum_probs=322.6
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc---cCcccccccCHhHhhhCCcEEEEceEE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKADSILLRTEEFYKDNDIHVIKGKKI 671 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~gv~~~~~~~v 671 (1466)
.++|+|||||+||++||..|+++|++..|++++++++++|..+.+++.+- ...+.+.....+++++.+++++.+++|
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 58999999999999999999999997789999999888887665554322 233444455667788899999999989
Q ss_pred EEeccccccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCC--c---EEEecCHHHHHhhcccCCCCCcEEEECCChHH
Q psy2951 672 ISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN--K---VFYLRTVEDANNIAPHITPESNVVVIGSSFIG 746 (1466)
Q Consensus 672 ~~i~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~--~---~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g 746 (1466)
..+ +...+.+.+.+++++.||+||+|||++|+.|+++ |.+ + ++++++.+++..+.+.+..+++|+|||+|++|
T Consensus 84 ~~i-~~~~~~v~~~~g~~~~~d~lviAtG~~p~~~~i~-G~~~~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g 161 (431)
T 1q1r_A 84 TAI-NRDRQQVILSDGRALDYDRLVLATGGRPRPLPVA-SGAVGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIG 161 (431)
T ss_dssp EEE-ETTTTEEEETTSCEEECSEEEECCCEEECCCGGG-TTHHHHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHH
T ss_pred EEE-ECCCCEEEECCCCEEECCEEEEcCCCCccCCCCC-CcccCCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHH
Confidence 999 7777889988888999999999999999999998 876 5 88889999998888777779999999999999
Q ss_pred HHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEec-CCCceEEEECCCCcEEecCE
Q psy2951 747 MEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN-EKNDVTAANLDNGTTIPADL 825 (1466)
Q Consensus 747 ~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~-~~~~~~~v~~~~g~~i~~D~ 825 (1466)
+|+|..|++.|.+|+++++.+.++...+++++.+.+.+.+++.||++++++++++++.. +++++..+.+++|+++++|.
T Consensus 162 ~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~ 241 (431)
T 1q1r_A 162 LEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADL 241 (431)
T ss_dssp HHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSE
T ss_pred HHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCE
Confidence 99999999999999999999988766689999999999999999999999999999841 34566678889999999999
Q ss_pred EEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhcc
Q psy2951 826 VIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVE 905 (1466)
Q Consensus 826 vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~ 905 (1466)
||+|+|++|++++++.+|++++ +| |.||++++|+.|+|||+|||+..+... .+.+.+++++..|..||+.+|.||++
T Consensus 242 Vv~a~G~~p~~~l~~~~gl~~~-~g-i~Vd~~~~ts~~~IyA~GD~~~~~~~~-~g~~~~~~~~~~A~~qg~~aa~~i~g 318 (431)
T 1q1r_A 242 VIAGIGLIPNCELASAAGLQVD-NG-IVINEHMQTSDPLIMAVGDCARFHSQL-YDRWVRIESVPNALEQARKIAAILCG 318 (431)
T ss_dssp EEECCCEEECCHHHHHTTCCBS-SS-EECCTTSBCSSTTEEECGGGEEEEETT-TTEEEECCSHHHHHHHHHHHHHHHTT
T ss_pred EEECCCCCcCcchhhccCCCCC-CC-EEECCCcccCCCCEEEEEeEEEEcccc-CCceEeeCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999886 45 999999999999999999999887644 45666778999999999999999999
Q ss_pred CCCcCcccCeeeeeecCceeEEeeccCCCCceeEecccccceEEEEEecCCeEEEEEeecCchhh
Q psy2951 906 KKTSLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLEALKFTAYYSNADKVLAILTVGMDPLA 970 (1466)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~g~~~~~ 970 (1466)
....++.+|++|+..|+..+...|......+....++.+...|.+++.++++++|++.+|.....
T Consensus 319 ~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~g~~~~~ 383 (431)
T 1q1r_A 319 KVPRDEAAPWFWSDQYEIGLKMVGLSEGYDRIIVRGSLAQPDFSVFYLQGDRVLAVDTVNRPVEF 383 (431)
T ss_dssp CCCCCCCCCEEEEEETTEEEEEEECCTTCSEEEEEEETTTTEEEEEEEETTEEEEEEEESCHHHH
T ss_pred CCCCCCCCCeEEEEECCceEEEEeCCCCCCEEEEEccCCCCeEEEEEEeCCEEEEEEEECChHHH
Confidence 88888999999999999999999988766666666666666788888889999999999987543
No 14
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=6e-42 Score=411.91 Aligned_cols=362 Identities=26% Similarity=0.422 Sum_probs=311.8
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc--cCcccccccCHhHhhhCCcEEEEceEE
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD--IKADSILLRTEEFYKDNDIHVIKGKKI 671 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~gv~~~~~~~v 671 (1466)
.+++|+|||||+||+++|..|+++|++.+|++++++++++|..+.++..+- ...+++..+ ++++.+++++.+++|
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~v 82 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLD---CKRAPEVEWLLGVTA 82 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGSBCC---CTTSCSCEEEETCCE
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCchhhhhHH---HHHHCCCEEEcCCEE
Confidence 458999999999999999999999997789999999988887766554321 112222221 567789999999989
Q ss_pred EEeccccccEEEccCCCEEecCEEEEcCCCCCCcCCC-CCCCC-cEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHH
Q psy2951 672 ISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQ-ADGVN-KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEA 749 (1466)
Q Consensus 672 ~~i~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~-~~g~~-~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~ 749 (1466)
+.+ +...+++.++++.++.||+||||||++|+.|++ + |.+ +++++++.+++..+.+.+..+++|+|||+|++|+|+
T Consensus 83 ~~i-~~~~~~v~~~~g~~~~~d~lviAtG~~~~~~~i~~-G~~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~ 160 (408)
T 2gqw_A 83 QSF-DPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQ-GATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLEL 160 (408)
T ss_dssp EEE-ETTTTEEEETTSCEEECSEEEECCCEEECCCGGGT-TCSSCEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHH
T ss_pred EEE-ECCCCEEEECCCCEEECCEEEECCCCCCCCCCccC-CCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHH
Confidence 999 888889999888899999999999999999998 8 875 788889999998887777779999999999999999
Q ss_pred HHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEc
Q psy2951 750 AAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVG 829 (1466)
Q Consensus 750 A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a 829 (1466)
|..|++.|.+|+++++.+.++...+++++.+.+.+.++++||++++++++++++ + + .+.+++|+++++|.||+|
T Consensus 161 A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~-~----~v~~~~g~~i~~D~vi~a 234 (408)
T 2gqw_A 161 AATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV-D-G----VVLLDDGTRIAADMVVVG 234 (408)
T ss_dssp HHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-T-T----EEEETTSCEEECSEEEEC
T ss_pred HHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-C-C----EEEECCCCEEEcCEEEEC
Confidence 999999999999999999888666899999999999999999999999999998 3 2 567788999999999999
Q ss_pred cccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCCC-
Q psy2951 830 IGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT- 908 (1466)
Q Consensus 830 ~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~~- 908 (1466)
+|++|++++++.+|++++ +| |.||+++||+.|+|||+|||+..+... .|.+.+++++..|..||+.+|.||++...
T Consensus 235 ~G~~p~~~l~~~~gl~~~-~g-i~Vd~~~~t~~~~IyA~GD~~~~~~~~-~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~ 311 (408)
T 2gqw_A 235 IGVLANDALARAAGLACD-DG-IFVDAYGRTTCPDVYALGDVTRQRNPL-SGRFERIETWSNAQNQGIAVARHLVDPTAP 311 (408)
T ss_dssp SCEEECCHHHHHHTCCBS-SS-EECCTTCBCSSTTEEECGGGEEEEETT-TTEEECCCCHHHHHHHHHHHHHHHHCTTSC
T ss_pred cCCCccHHHHHhCCCCCC-CC-EEECCCCccCCCCEEEEEEEEEecCcc-CCceeeccHHHHHHHHHHHHHHHhcCCCCC
Confidence 999999999988899886 45 999999999999999999999887543 35556677899999999999999999877
Q ss_pred cCcccCeeeeeecCceeEEeeccCCCCceeEecccc--cceEEEEEecCCeEEEEEeecCchhh
Q psy2951 909 SLSTIPFFWTMLFGVGFRFAGYAAGHTQVDIVGDLE--ALKFTAYYSNADKVLAILTVGMDPLA 970 (1466)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~g~~~~g~~~~~ 970 (1466)
.++.+|++|+.+|+..+.++|. +...+....++.. ...|.+++.++++++|++.+|.....
T Consensus 312 ~~~~~p~~~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~g~~~~~ 374 (408)
T 2gqw_A 312 GYAELPWYWSDQGALRIQVAGL-ASGDEEIVRGEVSLDAPKFTLIELQKGRIVGATCVNNARDF 374 (408)
T ss_dssp CCCCCCEEEEEETTEEEEEEEC-SCCSEEEEESCCCSSSCCEEEEEEETTEEEEEEEESCHHHH
T ss_pred cCCCCCeEEEEECCceEEEECC-CCCCEEEEEccCCCCCCeEEEEEEeCCEEEEEEEECChHHH
Confidence 8889999999999999999998 5556666666554 56788888899999999999987543
No 15
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=4.9e-42 Score=415.23 Aligned_cols=383 Identities=18% Similarity=0.312 Sum_probs=313.2
Q ss_pred CcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhcc----CcccccccChhhhccCCcEEEcCCeE
Q psy2951 1067 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDI----KADSILLRTEEFYKDNDIHVIKGKKI 1142 (1466)
Q Consensus 1067 ~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~v 1142 (1466)
+||||||||+||++||..|++.|++.+|+|||++++.+|.++.+++.+.. ....+..+..+++++.+++++.+++|
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 80 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEV 80 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeE
Confidence 47999999999999999999999888999999999999999888766541 12223344557788889999999999
Q ss_pred EEeecCCCCeEEecCC-----cEEecCeEEEecCCCCCcCCCCCCCCcEEEecCHHHHHhhhcccC--CCCeEEEEcCCH
Q psy2951 1143 ISDSELNEKKIKLQDG-----TSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHIT--PESNVVVIGSSF 1215 (1466)
Q Consensus 1143 ~~i~d~~~~~v~~~~g-----~~~~yd~lvlAtG~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~--~~~~vvVvG~g~ 1215 (1466)
+.| |+..+.+.+.++ .++.||+||||||++|+.|+++ | ++++.+++.+++.++++.+. ..++++|||+|+
T Consensus 81 ~~i-d~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~i~-g-~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ 157 (437)
T 4eqs_A 81 IAI-NDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFE-S-DITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGY 157 (437)
T ss_dssp EEE-ETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCCCCC-C-TTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSH
T ss_pred EEE-EccCcEEEEEeccCCceEEEEcCEEEECCCCcccccccc-C-ceEEeeccHHHHHHHHHhhhccCCcEEEEECCcc
Confidence 999 999998877533 3689999999999999998887 6 47888999999988876643 478999999999
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecC
Q psy2951 1216 IGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPAD 1295 (1466)
Q Consensus 1216 ~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D 1295 (1466)
+|+|+|..+++.|.+||++++.++.++ .+++++.+.+.+.++++||+++++++|++++ +. .+.+++|+++++|
T Consensus 158 ig~E~A~~l~~~g~~Vtlv~~~~~ll~-~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~-~~-----~v~~~~g~~~~~D 230 (437)
T 4eqs_A 158 VSLEVLENLYERGLHPTLIHRSDKINK-LMDADMNQPILDELDKREIPYRLNEEINAIN-GN-----EITFKSGKVEHYD 230 (437)
T ss_dssp HHHHHHHHHHHHTCEEEEEESSSCCST-TSCGGGGHHHHHHHHHTTCCEEESCCEEEEE-TT-----EEEETTSCEEECS
T ss_pred chhhhHHHHHhcCCcceeeeeeccccc-cccchhHHHHHHHhhccceEEEeccEEEEec-CC-----eeeecCCeEEeee
Confidence 999999999999999999999988775 6788999999999999999999999999997 32 3888999999999
Q ss_pred EEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhc
Q psy2951 1296 LVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMV 1375 (1466)
Q Consensus 1296 ~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~ 1375 (1466)
.|++|+|..||+++++.+|+.++.+|+|.||+++||++|+|||+|||+..|+.. .+.+.+...|+.|..||++||+||+
T Consensus 231 ~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~~~~Ts~p~IyA~GDva~~~~~~-~~~~~~~~~a~~A~~~g~~~a~ni~ 309 (437)
T 4eqs_A 231 MIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRH-VDLPASVPLAWGAHRAASIVAEQIA 309 (437)
T ss_dssp EEEECCCEEESCGGGTTSSCCCCTTSCEECCTTCBCSSTTEEECGGGEEEEBSS-SSSEECCCSHHHHHHHHHHHHHHHH
T ss_pred eEEEEeceecCcHHHHhhhhhhccCCcEecCCCccCCCCCEEEEEEccCccccc-CCccccchhHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999999998875 5778888999999999999999999
Q ss_pred CCCC-CCC-CCccceeccccccEEEEeeCC------CCceEEEcC-C------cCCceEEEEEEe--CCEEEEEEEecCc
Q psy2951 1376 EKKT-SLS-TIPFFWTMLFGVGFRFAGYAA------GHTQVDIVG-D------LEALKFTAYYSN--ADKVLAILTVGMD 1438 (1466)
Q Consensus 1376 g~~~-~~~-~~p~~w~~~~~~~~~~~g~~~------~~~~~~~~~-~------~~~~~~~~~~~~--~~~~~~~~~~~~~ 1438 (1466)
|... ++. ..+..|...++..+-.+|+.+ ++..+.+.. + -++..|++.+++ +++++|+..+|..
T Consensus 310 g~~~~~~~~~~~~~~~~~~~p~ia~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~d~~~~~ilGa~~~g~~ 389 (437)
T 4eqs_A 310 GNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLHLRVYYDTSNRQILRAAAVGKE 389 (437)
T ss_dssp SCTTCCCCCBCCCEEEEETTEEEEEEESCGGGGGGSCEEEEEEEEESSCTTSSSCCEEEEEEEEETTTCBEEEEEEEESS
T ss_pred CCCCcccccceeEEeeeeccceEEEeeCCHHHHHhCCceEEEEecCCchhhcCCCCcEEEEEEEECCCCEEEEEEEECcC
Confidence 9764 332 333334445667777778753 111111110 0 023457777774 5899999999963
Q ss_pred --H-HHHHHHHHHHcCCCCChhccccc
Q psy2951 1439 --P-LAAQFAERIKMQKYIQKDQIENN 1462 (1466)
Q Consensus 1439 --~-~~~~~~~~~~~~~~~~~~~~~~~ 1462 (1466)
. .+..+.-+|+.+ ++.++|++.
T Consensus 390 ~a~e~i~~~~~ai~~~--~t~~~l~~~ 414 (437)
T 4eqs_A 390 GADKRIDVLSMAMMNQ--LTVDELTEF 414 (437)
T ss_dssp SHHHHHHHHHHHHHTT--CBGGGGGGC
T ss_pred CHHHHHHHHHHHHHcC--CcHHHHhcC
Confidence 3 345556678777 566677554
No 16
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=1.8e-41 Score=417.47 Aligned_cols=390 Identities=20% Similarity=0.304 Sum_probs=302.5
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc---cCcccc------cccChhhhc-cCCcE
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKADSI------LLRTEEFYK-DNDIH 1135 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~---~~~~~~------~~~~~~~~~-~~~v~ 1135 (1466)
+++|||||||+||++||..|++.+...+|+|||++++++|.++.++..+. ...+.+ ..+..+++. ..+++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 46899999999999999999999444499999999999998876665443 122222 233344454 47999
Q ss_pred EEcCCeEEEeecCCCCeEEecC---Cc--EEecCeEEEecCCCCCcCCCCCCCC--cEEEecCHHHHHhhhcccC--CCC
Q psy2951 1136 VIKGKKIISDSELNEKKIKLQD---GT--SIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHIT--PES 1206 (1466)
Q Consensus 1136 ~~~~~~v~~i~d~~~~~v~~~~---g~--~~~yd~lvlAtG~~~~~~~~~~g~~--~v~~~~~~~~~~~l~~~~~--~~~ 1206 (1466)
++.+++|+.+ |+..+.+.+.+ |. .+.||+||+|||++|+.|++| |.+ +++++++.+++..+++.+. .++
T Consensus 83 ~~~~~~V~~i-d~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~-G~~~~~v~~~~~~~~~~~l~~~l~~~~~~ 160 (472)
T 3iwa_A 83 ALVETRAHAI-DRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVE-GMDLAGVTPVTNLDEAEFVQHAISAGEVS 160 (472)
T ss_dssp EECSEEEEEE-ETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCSCT-TTTSBTEEECCSHHHHHHHHHHCCTTSCS
T ss_pred EEECCEEEEE-ECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCCCC-CCCCCCEEEeCCHHHHHHHHHHhhcCCCC
Confidence 9999999999 99999998875 66 789999999999999999999 876 8999999999988887664 379
Q ss_pred eEEEEcCCHHHHHHHHHHhcC-CCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEE
Q psy2951 1207 NVVVIGSSFIGMEAAAFCASK-VKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAAN 1285 (1466)
Q Consensus 1207 ~vvVvG~g~~g~e~a~~l~~~-g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~ 1285 (1466)
+++|||+|++|+|+|..+++. |.+|+++++.+.++++.+++++.+.+.+.+++.||+++++++|++++ .+++++. +.
T Consensus 161 ~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~~~~~v~-v~ 238 (472)
T 3iwa_A 161 KAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLE-GENGKVA-RV 238 (472)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEE-ESSSBEE-EE
T ss_pred EEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEE-ccCCeEE-EE
Confidence 999999999999999999999 99999999999888878899999999999999999999999999998 4455544 78
Q ss_pred cCCCCeeecCEEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHH
Q psy2951 1286 LDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQY 1365 (1466)
Q Consensus 1286 l~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~ 1365 (1466)
+.+|+++++|.||+|+|..|++++++..|+.++.+|+|.||++++|+.|+|||+|||+..+... .|.+.+.++|+.|..
T Consensus 239 ~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~-~g~~~~~~~~~~A~~ 317 (472)
T 3iwa_A 239 ITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRTSDPDIFAGGDCVTIPNLV-TGKPGFFPLGSMANR 317 (472)
T ss_dssp EESSCEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEECCTTCBCSSTTEEECGGGEEEEBTT-TSSEECCCCTTHHHH
T ss_pred EeCCCEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEEECCCcccCCCCEEEeccceeccccc-CCceeecchHHHHHH
Confidence 8899999999999999999999998888999998899999999999999999999999988765 467777889999999
Q ss_pred HHHHHHHHhcCCCCCCC-CCccceeccccccEEEEeeCC------CCceEE--EcCC-------cCCceEEEEEEe--CC
Q psy2951 1366 HGRIAALNMVEKKTSLS-TIPFFWTMLFGVGFRFAGYAA------GHTQVD--IVGD-------LEALKFTAYYSN--AD 1427 (1466)
Q Consensus 1366 qa~~aa~~i~g~~~~~~-~~p~~w~~~~~~~~~~~g~~~------~~~~~~--~~~~-------~~~~~~~~~~~~--~~ 1427 (1466)
||++||+||+|...++. .+|++|+.+|+..+..+|+.+ +.+-.+ .... -++..|++.+++ ++
T Consensus 318 ~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~ 397 (472)
T 3iwa_A 318 QGRVIGTNLADGDATFPGAVGSWAVKLFEGSASGAGLTVEGALREGYDAVNVHVEQFDRAHFYPEKTIMTLQLVVDRPTR 397 (472)
T ss_dssp HHHHHHHHHTTCCCCCCCBCCCEEEECSSCEEEEEECCHHHHHHTTCCEEEEEEEC-----------CEEEEEEEETTTC
T ss_pred HHHHHHHHhcCCCccCCCCCcceEEEECCceeEEEECCHHHHHHcCCceEEEEEecCCccCccCCCceEEEEEEEECCCC
Confidence 99999999999877665 467889999999999999863 222111 1110 123457777774 68
Q ss_pred EEEEEEEecC-----cHHHHHHHHHHHcCCCCChhccccc
Q psy2951 1428 KVLAILTVGM-----DPLAAQFAERIKMQKYIQKDQIENN 1462 (1466)
Q Consensus 1428 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 1462 (1466)
+|+|+..+|. ...+..+.-+|+.+ ++.++|++.
T Consensus 398 ~ilG~~~~g~~~~~~~~~i~~~~~ai~~~--~t~~~l~~~ 435 (472)
T 3iwa_A 398 RVLGIQGFSTLGDALTARINAVATMLASK--PTVEDISNA 435 (472)
T ss_dssp BEEEEEEEESCHHHHHHHHHHHHHHHTTC--CBHHHHHTC
T ss_pred EEEEEEEECCCcccHHHHHHHHHHHHHcC--CCHHHHhcc
Confidence 9999999999 24455555667666 556666444
No 17
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=4.6e-41 Score=411.28 Aligned_cols=385 Identities=22% Similarity=0.318 Sum_probs=315.5
Q ss_pred CcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc---c--CcccccccChhhhccCCcEEEcCCe
Q psy2951 1067 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---I--KADSILLRTEEFYKDNDIHVIKGKK 1141 (1466)
Q Consensus 1067 ~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~---~--~~~~~~~~~~~~~~~~~v~~~~~~~ 1141 (1466)
++|||||||+||+++|..|++.+...+|+|||++++.+|....+..... . ..+.+.....+++.+.+++++.+++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 80 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQ 80 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCE
Confidence 3799999999999999999998333499999999988876544332222 1 2444445556677888999999999
Q ss_pred EEEeecCCCCeEEecC-----CcEEecCeEEEecCCCCCcCCCCCCCC--cEEEecCHHHHHhhhcccCCCCeEEEEcCC
Q psy2951 1142 IISDSELNEKKIKLQD-----GTSIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGSS 1214 (1466)
Q Consensus 1142 v~~i~d~~~~~v~~~~-----g~~~~yd~lvlAtG~~~~~~~~~~g~~--~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g 1214 (1466)
|..+ +...++|.+.+ +.++.||+||+|||++|+.|++| |.+ +++++++++++..+++....+++++|||+|
T Consensus 81 v~~i-~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~-g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG 158 (452)
T 2cdu_A 81 VTNV-DPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIP-GIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSG 158 (452)
T ss_dssp EEEE-EGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCT-TTTSTTEEECSSHHHHHHHHHHGGGCSEEEEECCS
T ss_pred EEEE-EcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCCCC-CCCCCCEEEeCcHHHHHHHHHHhccCCeEEEECcC
Confidence 9999 98888888864 56799999999999999999998 876 799999999998888777789999999999
Q ss_pred HHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeec
Q psy2951 1215 FIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPA 1294 (1466)
Q Consensus 1215 ~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~ 1294 (1466)
++|+|+|..|++.|.+|+++++.++++++.+++++.+.+.+.++++||+++++++|++++ .+++++..+.+ +|+++++
T Consensus 159 ~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~-~~~~~v~~v~~-~g~~i~~ 236 (452)
T 2cdu_A 159 YIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFE-EVDDEIITKTL-DGKEIKS 236 (452)
T ss_dssp HHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEE-EETTEEEEEET-TSCEEEE
T ss_pred HHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEE-cCCCeEEEEEe-CCCEEEC
Confidence 999999999999999999999999998878899999999999999999999999999998 43555655666 7889999
Q ss_pred CEEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHh
Q psy2951 1295 DLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNM 1374 (1466)
Q Consensus 1295 D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i 1374 (1466)
|.||+|+|..|++++++.. +.++.+|+|.||+++||+.|+|||+|||+..+... .|.+.+..+|+.|..||+.||+||
T Consensus 237 D~vv~a~G~~p~~~ll~~~-l~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~~~-~g~~~~~~~~~~A~~~g~~aa~~i 314 (452)
T 2cdu_A 237 DIAILCIGFRPNTELLKGK-VAMLDNGAIITDEYMHSSNRDIFAAGDSAAVHYNP-TNSNAYIPLATNAVRQGRLVGLNL 314 (452)
T ss_dssp SEEEECCCEEECCGGGTTT-SCBCTTSCBCCCTTSBCSSTTEEECSTTBCEEETT-TTEEECCCCHHHHHHHHHHHHHTS
T ss_pred CEEEECcCCCCCHHHHHHh-hhcCCCCCEEECCCcCcCCCCEEEcceEEEecccc-CCCeeecchHHHHHHHHHHHHHHh
Confidence 9999999999999998877 88888899999999999999999999999987654 466677889999999999999999
Q ss_pred cCCCCCCC-CCccceeccccccEEEEeeCC-----CCceEEE-------cCC--c-CCceEEEEEEe--CCEEEEEEEec
Q psy2951 1375 VEKKTSLS-TIPFFWTMLFGVGFRFAGYAA-----GHTQVDI-------VGD--L-EALKFTAYYSN--ADKVLAILTVG 1436 (1466)
Q Consensus 1375 ~g~~~~~~-~~p~~w~~~~~~~~~~~g~~~-----~~~~~~~-------~~~--~-~~~~~~~~~~~--~~~~~~~~~~~ 1436 (1466)
+|...++. ..|++|+.+|+..+..+|..+ ...++.+ +.. + +...|++.+++ +++++|+..+|
T Consensus 315 ~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g 394 (452)
T 2cdu_A 315 TEDKVKDMGTQSSSGLKLYGRTYVSTGINTALAKANNLKVSEVIIADNYRPEFMLSTDEVLMSLVYDPKTRVILGGALSS 394 (452)
T ss_dssp SSCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTBSCCCEEEEEEEECTTTCBEEEEEEEE
T ss_pred CCCCCcCCCccceEEEEECCeeeEeecCCHHHHHHcCCceEEEEEecCCccccCCCCceEEEEEEEECCCCEEEEEEEEc
Confidence 99765554 468899999999999999853 1111211 111 1 13457777774 58999999999
Q ss_pred C-c--HHHHHHHHHHHcCCCCChhcc
Q psy2951 1437 M-D--PLAAQFAERIKMQKYIQKDQI 1459 (1466)
Q Consensus 1437 ~-~--~~~~~~~~~~~~~~~~~~~~~ 1459 (1466)
. . ..+..+..+|+.+. +.++|
T Consensus 395 ~~~~~~~i~~~~~ai~~~~--~~~~l 418 (452)
T 2cdu_A 395 MHDVSQSANVLSVCIQNKN--TIDDL 418 (452)
T ss_dssp SSCCHHHHHHHHHHHHTTC--BHHHH
T ss_pred CccHHHHHHHHHHHHHcCC--CHHHH
Confidence 8 2 23355677888774 44444
No 18
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=8.6e-41 Score=399.87 Aligned_cols=355 Identities=19% Similarity=0.271 Sum_probs=300.5
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc--cCcccccccC-hhhhccCCcEEEcCCeE
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD--IKADSILLRT-EEFYKDNDIHVIKGKKI 1142 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~--~~~~~~~~~~-~~~~~~~~v~~~~~~~v 1142 (1466)
+++|||||||+||++||..|++.|+..+|+|||+++..+|.++.++..+. .....+.... ..++++.+++++.+++|
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v 83 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTRV 83 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECSCCC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeCCEE
Confidence 47899999999999999999999987789999999988888887776654 2223333322 34567789999999989
Q ss_pred EEeecCCCCeEEecCCcEEecCeEEEecCCCCCcCCCCCCCC--cEEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHH
Q psy2951 1143 ISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEA 1220 (1466)
Q Consensus 1143 ~~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~--~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~ 1220 (1466)
..+ ++..++|.+++ .++.||+||+|||++|+.|++| |.+ ++++.+++.++.++++.+..+++++|||+|++|+|+
T Consensus 84 ~~i-~~~~~~v~~~~-~~~~~d~lviAtG~~p~~p~i~-g~~~~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~ 160 (384)
T 2v3a_A 84 TGI-DPGHQRIWIGE-EEVRYRDLVLAWGAEPIRVPVE-GDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEF 160 (384)
T ss_dssp CEE-EGGGTEEEETT-EEEECSEEEECCCEEECCCCCB-STTTTCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHH
T ss_pred EEE-ECCCCEEEECC-cEEECCEEEEeCCCCcCCCCCC-CcCcCCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHH
Confidence 999 98888999865 4799999999999999999998 875 799999999998888888789999999999999999
Q ss_pred HHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEe
Q psy2951 1221 AAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVG 1300 (1466)
Q Consensus 1221 a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a 1300 (1466)
|..|++.|.+|+++++.+.++.+.+++++.+.+.+.+++.||+++++++|++++ .++ ....|.+.+|+++++|.||+|
T Consensus 161 A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~-~~~-~~~~v~~~~g~~i~~d~vv~a 238 (384)
T 2v3a_A 161 ANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLK-KAG-EGLEAHLSDGEVIPCDLVVSA 238 (384)
T ss_dssp HHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEE-EET-TEEEEEETTSCEEEESEEEEC
T ss_pred HHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEE-ecC-CEEEEEECCCCEEECCEEEEC
Confidence 999999999999999999888877789999999999999999999999999998 333 345688899999999999999
Q ss_pred eccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCCCC
Q psy2951 1301 IGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS 1380 (1466)
Q Consensus 1301 ~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~~ 1380 (1466)
+|..|++++++.+|+.++ +| |.||++++|+.|+|||+|||+..+... ..+|..|..||++||+||+|...+
T Consensus 239 ~G~~p~~~l~~~~g~~~~-~g-i~vd~~~~t~~~~IyA~GD~~~~~~~~-------~~~~~~a~~~g~~~a~~i~g~~~~ 309 (384)
T 2v3a_A 239 VGLRPRTELAFAAGLAVN-RG-IVVDRSLRTSHANIYALGDCAEVDGLN-------LLYVMPLMACARALAQTLAGNPSQ 309 (384)
T ss_dssp SCEEECCHHHHHTTCCBS-SS-EEECTTCBCSSTTEEECGGGEEETTBC-------CCSHHHHHHHHHHHHHHHTTCCCC
T ss_pred cCCCcCHHHHHHCCCCCC-CC-EEECCCCCCCCCCEEEeeeeeeECCCC-------cchHHHHHHHHHHHHHHhcCCCcc
Confidence 999999999999999987 56 999999999999999999999764321 357899999999999999997665
Q ss_pred CC--CCccc-eeccccccEEEEeeCCCC-ceEEEcCCcCCceEEEEEEe-CCEEEEEEEecCc
Q psy2951 1381 LS--TIPFF-WTMLFGVGFRFAGYAAGH-TQVDIVGDLEALKFTAYYSN-ADKVLAILTVGMD 1438 (1466)
Q Consensus 1381 ~~--~~p~~-w~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 1438 (1466)
++ .+||+ |+ ++.+++++|..... ....+.++ +..|.+++++ +|+++|+.++|..
T Consensus 310 ~~~~~~p~~~~~--~~~~~~~~g~~~~~~~~~~~~~~--~~g~~~~~~~~~~~i~G~~~~g~~ 368 (384)
T 2v3a_A 310 VAYGPMPVTVKT--PACPLVVSPPPRGMDGQWLVEGS--GTDLKVLCRDTAGRVIGYALTGAA 368 (384)
T ss_dssp CCCCCCCEEECC--TTSCEEEECCCTTCCCEEEEEEE--TTEEEEEEECTTSCEEEEEEEGGG
T ss_pred CCCCCcceEEEE--CCeeEEEecCCCCCCceEEEEec--CCcEEEEEEccCCEEEEEEEECcc
Confidence 54 67764 44 56789999986533 34555554 3458878775 8999999999985
No 19
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=1.5e-40 Score=409.98 Aligned_cols=385 Identities=18% Similarity=0.243 Sum_probs=314.2
Q ss_pred CCcEEEECCchHHHHHHHHHHhcC-CCCcEEEEcCCCCCCCCCCCCchhhc---cCcccccccChhhhccCCcEEEcCCe
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNG-FTGKLYFITDENFLPYDRVKLSKQLD---IKADSILLRTEEFYKDNDIHVIKGKK 1141 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g-~~~~i~li~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~ 1141 (1466)
+++|||||||+||+++|..|++.| ...+|+|||++++.+|....+...+. ...+.+.....+++++.+++++.+++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~ 114 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESP 114 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCE
Confidence 378999999999999999999987 33499999999887775543332222 22344444556677888999999999
Q ss_pred EEEeecCCCCeEEec-CC--cEEecCeEEEecCCCCCcCCCCCCCC-------------cEEEecCHHHHHhhhccc--C
Q psy2951 1142 IISDSELNEKKIKLQ-DG--TSIDFTKIYLATGSSPRTISQADGVN-------------KVFYLRTVEDANNIAPHI--T 1203 (1466)
Q Consensus 1142 v~~i~d~~~~~v~~~-~g--~~~~yd~lvlAtG~~~~~~~~~~g~~-------------~v~~~~~~~~~~~l~~~~--~ 1203 (1466)
|..+ +...++|.+. ++ .++.||+||+|||++|+.|++| |.+ +++++++++++..+++.+ .
T Consensus 115 v~~i-~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~-G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~ 192 (490)
T 2bc0_A 115 VQSI-DYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIK-GAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENK 192 (490)
T ss_dssp EEEE-ETTTTEEEEEETTEEEEEECSEEEECCCEEECCCSCB-TCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTST
T ss_pred EEEE-ECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCCCC-CccccccccccccccCCEEEeCCHHHHHHHHHHhhhc
Confidence 9999 9988889886 53 4799999999999999999888 764 689999999998888777 6
Q ss_pred CCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEE
Q psy2951 1204 PESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTA 1283 (1466)
Q Consensus 1204 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~ 1283 (1466)
.+++|+|||+|++|+|+|..|++.|.+|+++++.++++++.+++++.+.+.+.+++.||+++++++|++++ . ++++..
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~-~~~v~~ 270 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVA-G-NGKVEK 270 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEE-C-SSSCCE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEE-c-CCcEEE
Confidence 78999999999999999999999999999999999988878899999999999999999999999999998 3 445544
Q ss_pred EEcCCCCeeecCEEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHH
Q psy2951 1284 ANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLA 1363 (1466)
Q Consensus 1284 v~l~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A 1363 (1466)
+.+ +|+++++|.||+|+|..|++++++.. +.++.+|+|.||+++||+.|+|||+|||+..+... .|.+.+..+|..|
T Consensus 271 v~~-~g~~i~~D~Vi~a~G~~p~~~ll~~~-l~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~~~~-~g~~~~~~~~~~A 347 (490)
T 2bc0_A 271 IIT-DKNEYDVDMVILAVGFRPNTTLGNGK-IDLFRNGAFLVNKRQETSIPGVYAIGDCATIYDNA-TRDTNYIALASNA 347 (490)
T ss_dssp EEE-SSCEEECSEEEECCCEEECCGGGTTC-SCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEETT-TTEEECCCCHHHH
T ss_pred EEE-CCcEEECCEEEECCCCCcChHHHHhh-hccCCCCCEEECCCcccCCCCEEEeeeeEEecccc-CCceeecccHHHH
Confidence 555 77899999999999999999998877 88888899999999999999999999999977654 4666777899999
Q ss_pred HHHHHHHHHHhcCCCCCCC-CCccceeccccccEEEEeeCC-----CCceEEE-------cCC--c--CCceEEEEEEe-
Q psy2951 1364 QYHGRIAALNMVEKKTSLS-TIPFFWTMLFGVGFRFAGYAA-----GHTQVDI-------VGD--L--EALKFTAYYSN- 1425 (1466)
Q Consensus 1364 ~~qa~~aa~~i~g~~~~~~-~~p~~w~~~~~~~~~~~g~~~-----~~~~~~~-------~~~--~--~~~~~~~~~~~- 1425 (1466)
..||++||.||+|...++. ..|++|+.+|+..+..+|..+ ...++.+ +.. + +...|++.+++
T Consensus 348 ~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~ 427 (490)
T 2bc0_A 348 VRTGIVAAHNACGTDLEGIGVQGSNGISIYGLHMVSTGLTLEKAKRLGFDAAVTEYTDNQKPEFIEHGNFPVTIKIVYDK 427 (490)
T ss_dssp HHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTCCSSCCEEEEEEEEET
T ss_pred HHHHHHHHHHhcCCCCCCCCcccceEEEECCcEeEEeeCCHHHHHHcCCceEEEEEecCCcccccCCCCceEEEEEEEEC
Confidence 9999999999999765554 468899999999999999853 1112221 221 1 23457777764
Q ss_pred -CCEEEEEEEecC-c--HHHHHHHHHHHcCCCCChhcc
Q psy2951 1426 -ADKVLAILTVGM-D--PLAAQFAERIKMQKYIQKDQI 1459 (1466)
Q Consensus 1426 -~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~ 1459 (1466)
+++|+|+..+|. . ..+..+..+|+.+. +.++|
T Consensus 428 ~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~--~~~~l 463 (490)
T 2bc0_A 428 DSRRILGAQMAAREDVSMGIHMFSLAIQEGV--TIEKL 463 (490)
T ss_dssp TTCBEEEEEEEESSCCTTHHHHHHHHHHHTC--BHHHH
T ss_pred CCCEEEEEEEEcCcCHHHHHHHHHHHHHcCC--CHHHH
Confidence 689999999998 2 33456677888774 34444
No 20
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.2e-40 Score=407.36 Aligned_cols=387 Identities=20% Similarity=0.284 Sum_probs=309.0
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc--cCcccccccChhhh-ccCCcEEEcCCeE
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD--IKADSILLRTEEFY-KDNDIHVIKGKKI 1142 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~-~~~~v~~~~~~~v 1142 (1466)
+++|||||||+||+++|..|++.+...+|+|||++++.+|.+..++..+. ...+.+.....+++ ++.+++++.+++|
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 46899999999999999999998555599999999987776554443332 23333333344445 6789999999999
Q ss_pred EEeecCCCCeEEecCC-cEEecCeEEEecCCCCCcCCCCCCCC--cEEEecCHHHHHhhhcccC--CCCeEEEEcCCHHH
Q psy2951 1143 ISDSELNEKKIKLQDG-TSIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHIT--PESNVVVIGSSFIG 1217 (1466)
Q Consensus 1143 ~~i~d~~~~~v~~~~g-~~~~yd~lvlAtG~~~~~~~~~~g~~--~v~~~~~~~~~~~l~~~~~--~~~~vvVvG~g~~g 1217 (1466)
+.+ +...+.|.++++ .++.||+||+|||++|+.|++| |.+ ++++.++.+++..+.+.+. .+++++|||+|++|
T Consensus 83 ~~i-~~~~~~v~~~~g~~~~~~d~lviAtG~~p~~p~i~-G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g 160 (449)
T 3kd9_A 83 IEV-DTGYVRVRENGGEKSYEWDYLVFANGASPQVPAIE-GVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIG 160 (449)
T ss_dssp EEE-CSSEEEEECSSSEEEEECSEEEECCCEEECCCSCB-TTTSTTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHH
T ss_pred EEE-ecCCCEEEECCceEEEEcCEEEECCCCCCCCCCCC-CCCCCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHH
Confidence 999 998888988877 4899999999999999999999 876 7898889999988887776 68999999999999
Q ss_pred HHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEE
Q psy2951 1218 MEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLV 1297 (1466)
Q Consensus 1218 ~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~v 1297 (1466)
+|+|..|++.|.+|+++++.++++.+.+++++.+.+.+.++++ |++++++.+.+++ .++ ++..+ +.+|+++++|.|
T Consensus 161 ~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~-~~~-~v~~v-~~~g~~i~~D~V 236 (449)
T 3kd9_A 161 IEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIE-GEE-RVEKV-VTDAGEYKAELV 236 (449)
T ss_dssp HHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEE-CSS-SCCEE-EETTEEEECSEE
T ss_pred HHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEe-ccC-cEEEE-EeCCCEEECCEE
Confidence 9999999999999999999999998778999999999999999 9999999999998 333 44334 457789999999
Q ss_pred EEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCC
Q psy2951 1298 IVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEK 1377 (1466)
Q Consensus 1298 v~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~ 1377 (1466)
|+|+|..|++++++..|+.++.+|+|.||++++|+.|+|||+|||+..+... .|.+.+...|+.|..||++||+||+|.
T Consensus 237 v~a~G~~p~~~l~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~-~g~~~~~~l~~~A~~~g~~aa~~i~g~ 315 (449)
T 3kd9_A 237 ILATGIKPNIELAKQLGVRIGETGAIWTNEKMQTSVENVYAAGDVAETRHVI-TGRRVWVPLAPAGNKMGYVAGSNIAGK 315 (449)
T ss_dssp EECSCEEECCHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBCEEBTT-TCSEECCCCHHHHHHHHHHHHHHHTTC
T ss_pred EEeeCCccCHHHHHhCCccCCCCCCEEECCCCccCCCCEEEeeeeeeecccc-CCceEEeccHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999998899999999999999999999999987764 467777889999999999999999998
Q ss_pred CCCCCC-CccceeccccccEEEEeeCC------CCceEEE--c--C----C-cCCceEEEEEEeC--CEEEEEEEecCc-
Q psy2951 1378 KTSLST-IPFFWTMLFGVGFRFAGYAA------GHTQVDI--V--G----D-LEALKFTAYYSNA--DKVLAILTVGMD- 1438 (1466)
Q Consensus 1378 ~~~~~~-~p~~w~~~~~~~~~~~g~~~------~~~~~~~--~--~----~-~~~~~~~~~~~~~--~~~~~~~~~~~~- 1438 (1466)
..++.. .|++|+.+++..+..+|+.+ +.+-.+. . + . -++..|++..++. ++|+|+..+|..
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a 395 (449)
T 3kd9_A 316 ELHFPGVLGTAVTKFMDVEIGKTGLTEMEALKEGYDVRTAFIKASTRPHYYPGGREIWLKGVVDNETNRLLGVQVVGSDI 395 (449)
T ss_dssp CCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSC
T ss_pred CccCCCcccceEEEEcCcEEEEecCCHHHHHHCCCceEEEEEecCCccccCCCCceEEEEEEEECCCCEEEEEEEEChHH
Confidence 776654 58889999999999999863 2221111 1 1 0 1245688887763 899999999986
Q ss_pred -HHHHHHHHHHHcCCCCChhcccc
Q psy2951 1439 -PLAAQFAERIKMQKYIQKDQIEN 1461 (1466)
Q Consensus 1439 -~~~~~~~~~~~~~~~~~~~~~~~ 1461 (1466)
..+..+.-+|+.+ ++.++|++
T Consensus 396 ~e~i~~~~~ai~~~--~t~~~l~~ 417 (449)
T 3kd9_A 396 LPRIDTAAAMLMAG--FTTKDAFF 417 (449)
T ss_dssp HHHHHHHHHHHHTT--CBHHHHHT
T ss_pred HHHHHHHHHHHHcC--CcHHHHhh
Confidence 4455566677776 45555543
No 21
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=7.9e-41 Score=404.65 Aligned_cols=361 Identities=19% Similarity=0.321 Sum_probs=296.3
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc---cCcc-cccccCHhHhhhCCcEEEEceEE
Q psy2951 596 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKAD-SILLRTEEFYKDNDIHVIKGKKI 671 (1466)
Q Consensus 596 ~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~gv~~~~~~~v 671 (1466)
+|||||||||||++||..|+++|++..|+++|++++.+|..+.++..+. .+.. .+.....+++++.+++++.+++|
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 80 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEV 80 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeE
Confidence 4799999999999999999999998889999999988888777665443 1122 22333345677889999999999
Q ss_pred EEeccccccEEEccC-----CCEEecCEEEEcCCCCCCcCCCCCCCCcEEEecCHHHHHhhcccC--CCCCcEEEECCCh
Q psy2951 672 ISDSELNEKKIKLQD-----GTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHI--TPESNVVVIGSSF 744 (1466)
Q Consensus 672 ~~i~~~~~~~v~~~~-----~~~~~~d~lviAtG~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~vvVvG~G~ 744 (1466)
+.+ |...+.+.+.. +.++.||+||||||++|+.|+++ |. +++.+++++++..+.+.+ .++++++|||+|+
T Consensus 81 ~~i-d~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~i~-g~-~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ 157 (437)
T 4eqs_A 81 IAI-NDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFE-SD-ITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGY 157 (437)
T ss_dssp EEE-ETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCCCCC-CT-TEECCSSHHHHHHHHHHHHHHTCCEEEEECCSH
T ss_pred EEE-EccCcEEEEEeccCCceEEEEcCEEEECCCCcccccccc-Cc-eEEeeccHHHHHHHHHhhhccCCcEEEEECCcc
Confidence 999 88877776543 23689999999999999999888 74 577888998888776543 2478999999999
Q ss_pred HHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecC
Q psy2951 745 IGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPAD 824 (1466)
Q Consensus 745 ~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D 824 (1466)
+|+|+|..++++|.+||++++.++++ +.+++++.+.+.+.++++||++++++++++++.. .+.+++|+++++|
T Consensus 158 ig~E~A~~l~~~g~~Vtlv~~~~~ll-~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~------~v~~~~g~~~~~D 230 (437)
T 4eqs_A 158 VSLEVLENLYERGLHPTLIHRSDKIN-KLMDADMNQPILDELDKREIPYRLNEEINAINGN------EITFKSGKVEHYD 230 (437)
T ss_dssp HHHHHHHHHHHHTCEEEEEESSSCCS-TTSCGGGGHHHHHHHHHTTCCEEESCCEEEEETT------EEEETTSCEEECS
T ss_pred chhhhHHHHHhcCCcceeeeeecccc-ccccchhHHHHHHHhhccceEEEeccEEEEecCC------eeeecCCeEEeee
Confidence 99999999999999999999999876 5788999999999999999999999999999832 5778999999999
Q ss_pred EEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhc
Q psy2951 825 LVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMV 904 (1466)
Q Consensus 825 ~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~ 904 (1466)
.|++|+|++||+++++..|++++++|+|.||+++||++|+|||+|||+..+... ++.+..+++++.|.+||+++|+||+
T Consensus 231 ~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~~~~Ts~p~IyA~GDva~~~~~~-~~~~~~~~~a~~A~~~g~~~a~ni~ 309 (437)
T 4eqs_A 231 MIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRH-VDLPASVPLAWGAHRAASIVAEQIA 309 (437)
T ss_dssp EEEECCCEEESCGGGTTSSCCCCTTSCEECCTTCBCSSTTEEECGGGEEEEBSS-SSSEECCCSHHHHHHHHHHHHHHHH
T ss_pred eEEEEeceecCcHHHHhhhhhhccCCcEecCCCccCCCCCEEEEEEccCccccc-CCccccchhHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999999988765 5677788899999999999999999
Q ss_pred cCCC-cCc-ccCeeeeeecCceeEEeeccCCCCce----e--E-ec------ccccceEEEEEe--cCCeEEEEEeecCc
Q psy2951 905 EKKT-SLS-TIPFFWTMLFGVGFRFAGYAAGHTQV----D--I-VG------DLEALKFTAYYS--NADKVLAILTVGMD 967 (1466)
Q Consensus 905 ~~~~-~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~----~--~-~~------~~~~~~~~~~~~--~~~~i~g~~~~g~~ 967 (1466)
|... .+. .++..+..+++..+..+|+++...+. . . .. .-++..|+|+++ ++++++|++++|.+
T Consensus 310 g~~~~~~~~~~~~~~~~~~~p~ia~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~d~~~~~ilGa~~~g~~ 389 (437)
T 4eqs_A 310 GNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLHLRVYYDTSNRQILRAAAVGKE 389 (437)
T ss_dssp SCTTCCCCCBCCCEEEEETTEEEEEEESCGGGGGGSCEEEEEEEEESSCTTSSSCCEEEEEEEEETTTCBEEEEEEEESS
T ss_pred CCCCcccccceeEEeeeeccceEEEeeCCHHHHHhCCceEEEEecCCchhhcCCCCcEEEEEEEECCCCEEEEEEEECcC
Confidence 8754 232 33333444677778888887532111 0 0 00 012456889888 56899999999975
No 22
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=2.6e-40 Score=404.19 Aligned_cols=385 Identities=20% Similarity=0.231 Sum_probs=309.8
Q ss_pred CcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc---cCcccccccChhhhccCCcEEEcCCeEE
Q psy2951 1067 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKADSILLRTEEFYKDNDIHVIKGKKII 1143 (1466)
Q Consensus 1067 ~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~v~ 1143 (1466)
++|||||||+||++||..|++.+...+|+|||++++.+|.+..+..... ...+.+.....+++.+.+++++.+++|+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 5899999999999999999998444499999999999988776655443 2334555556678888999999999999
Q ss_pred EeecCCCCeEEec---CCcEEecCeEEEecCCCCCcCCCCCCCC--cEEEecCHHHHHhhhcccCCCCeEEEEcCCHHHH
Q psy2951 1144 SDSELNEKKIKLQ---DGTSIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGM 1218 (1466)
Q Consensus 1144 ~i~d~~~~~v~~~---~g~~~~yd~lvlAtG~~~~~~~~~~g~~--~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~ 1218 (1466)
.+ |+..+.+.+. ++.++.||+||+|||++|+.|++| |.+ ++++.++.+++..+++....+++++|||+|++|+
T Consensus 83 ~i-d~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p~i~-g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~ 160 (452)
T 3oc4_A 83 AM-DVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIR-GSQTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGM 160 (452)
T ss_dssp EE-ETTTTEEEEEETTEEEEEECSEEEECCCCCBCCCCCB-TTTCTTEEEGGGCC----CCHHHHTCSEEEEECCSHHHH
T ss_pred EE-ECCCCEEEEEecCceEEEEcCEEEECCCcccCCCCCC-CCCCCCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHH
Confidence 99 9999988773 566899999999999999999999 887 7899888888877777667789999999999999
Q ss_pred HHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEE
Q psy2951 1219 EAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 1298 (1466)
Q Consensus 1219 e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv 1298 (1466)
|+|..+++.|.+|+++++.++++++.+++++.+.+.+.++++||+++++++|++++ .+++++ .|.+++| ++++|.||
T Consensus 161 E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~~~~~v-~v~~~~g-~i~aD~Vv 237 (452)
T 3oc4_A 161 EAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIE-ETANGI-VLETSEQ-EISCDSGI 237 (452)
T ss_dssp HHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEE-ECSSCE-EEEESSC-EEEESEEE
T ss_pred HHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEE-ccCCeE-EEEECCC-EEEeCEEE
Confidence 99999999999999999999999877899999999999999999999999999998 444555 6788777 89999999
Q ss_pred EeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCC
Q psy2951 1299 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK 1378 (1466)
Q Consensus 1299 ~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~ 1378 (1466)
+|+|..|++++++.. +.++.+|+|.||+++||+.|+|||+|||+..+... .|.+.+...|+.|..||+.||.||+|..
T Consensus 238 ~A~G~~p~~~~l~~~-~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~-~~~~~~~~~~~~A~~~g~~aa~~i~g~~ 315 (452)
T 3oc4_A 238 FALNLHPQLAYLDKK-IQRNLDQTIAVDAYLQTSVPNVFAIGDCISVMNEP-VAETFYAPLVNNAVRTGLVVANNLEEKT 315 (452)
T ss_dssp ECSCCBCCCSSCCTT-SCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEEGG-GTEEECCCCHHHHHHHHHHHTTSSSSCC
T ss_pred ECcCCCCChHHHHhh-hccCCCCCEEECcCccCCCCCEEEEEeeEEecccc-CCceeecchHHHHHHHHHHHHHHhcCCC
Confidence 999999999988765 88888899999999999999999999999887654 3566677889999999999999999987
Q ss_pred CCCC-CCccceeccccccEEEEeeCC------CCceEEEc------CCc-CCceEEEEEEe--CCEEEEEEEecCc---H
Q psy2951 1379 TSLS-TIPFFWTMLFGVGFRFAGYAA------GHTQVDIV------GDL-EALKFTAYYSN--ADKVLAILTVGMD---P 1439 (1466)
Q Consensus 1379 ~~~~-~~p~~w~~~~~~~~~~~g~~~------~~~~~~~~------~~~-~~~~~~~~~~~--~~~~~~~~~~~~~---~ 1439 (1466)
.++. ..+.+|+.+|+..+..+|+.+ +.+-.+.. .-+ ++..|++..++ +++++|+..+|.. .
T Consensus 316 ~~~~~~~~~~~~~~~~~~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~~a~e 395 (452)
T 3oc4_A 316 HRFIGSLRTMGTKVGDYYLASTGLTETEGLFFPQTLASIIVRQPAPPLQHGTEILGKLIYDKVTQRVLGAQLCSKNNCLE 395 (452)
T ss_dssp CCCCCCCCCEEEEETTEEEEEEECCSGGGGGSSSCEEEEEEEEECTTTTCSCEEEEEEEEETTTCBEEEEEEEESSCCTH
T ss_pred ccCCCccccEEEEEcCeeEEEecCCHHHHHHCCCceEEEEEecCCccCCCCCeEEEEEEEECCCCEEEEEEEEeCCCHHH
Confidence 6664 455678899998888889864 11111111 000 24568888776 3899999999973 5
Q ss_pred HHHHHHHHHHcCCCCChhccc
Q psy2951 1440 LAAQFAERIKMQKYIQKDQIE 1460 (1466)
Q Consensus 1440 ~~~~~~~~~~~~~~~~~~~~~ 1460 (1466)
.+..+.-+|+.+ ++.++|+
T Consensus 396 ~i~~~~~ai~~~--~t~~~l~ 414 (452)
T 3oc4_A 396 KINTLALSIQTG--QTLTDLL 414 (452)
T ss_dssp HHHHHHHHHHTT--CBHHHHH
T ss_pred HHHHHHHHHHcC--CCHHHHH
Confidence 566777788877 4555553
No 23
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=4.3e-40 Score=404.77 Aligned_cols=387 Identities=20% Similarity=0.309 Sum_probs=315.2
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc---cCcccccccChhhh-ccCCcEEEcCCe
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKADSILLRTEEFY-KDNDIHVIKGKK 1141 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~-~~~~v~~~~~~~ 1141 (1466)
+++|||||||+||++||..|++.+...+|+|||+++..+|.++.++.... ...+.+..+..+++ +..+++++.+++
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~ 115 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHE 115 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCE
Confidence 46899999999999999999997434499999999988887665544332 12344444445555 445999999999
Q ss_pred EEEeecCCCCeEEecC---Cc--EEecCeEEEecCCCCCcCCCCCCCC--cEEEecCHHHHHhhhcccC--CCCeEEEEc
Q psy2951 1142 IISDSELNEKKIKLQD---GT--SIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHIT--PESNVVVIG 1212 (1466)
Q Consensus 1142 v~~i~d~~~~~v~~~~---g~--~~~yd~lvlAtG~~~~~~~~~~g~~--~v~~~~~~~~~~~l~~~~~--~~~~vvVvG 1212 (1466)
|..+ +...+.|.+.+ |+ ++.||+||+|||++|+.|++| |.+ +++++++.+++.++++.+. .+++|+|||
T Consensus 116 v~~i-~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~-G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViG 193 (480)
T 3cgb_A 116 VTKV-DTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWE-GRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIG 193 (480)
T ss_dssp EEEE-ETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCB-TTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEEC
T ss_pred EEEE-ECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCCCCC-CccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEEC
Confidence 9999 99888888764 66 799999999999999999999 876 7898999999988877664 689999999
Q ss_pred CCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCee
Q psy2951 1213 SSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTI 1292 (1466)
Q Consensus 1213 ~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i 1292 (1466)
+|++|+|+|..|++.|.+|+++++.+.++. .+++++.+.+.+.+++.||+++++++|++++ .+ +++..+.++ +.++
T Consensus 194 gG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~-~~-~~v~~v~~~-~~~i 269 (480)
T 3cgb_A 194 GGAIGLEMAETFVELGKKVRMIERNDHIGT-IYDGDMAEYIYKEADKHHIEILTNENVKAFK-GN-ERVEAVETD-KGTY 269 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCGGGTTS-SSCHHHHHHHHHHHHHTTCEEECSCCEEEEE-ES-SBEEEEEET-TEEE
T ss_pred CCHHHHHHHHHHHhcCCeEEEEEeCCchhh-cCCHHHHHHHHHHHHHcCcEEEcCCEEEEEE-cC-CcEEEEEEC-CCEE
Confidence 999999999999999999999999987776 6789999999999999999999999999998 33 456556665 4589
Q ss_pred ecCEEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHH
Q psy2951 1293 PADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAAL 1372 (1466)
Q Consensus 1293 ~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~ 1372 (1466)
++|.||+|+|..|++++++..|+.++.+|+|.||++++|+.|+|||+|||+..+... .|.+.++.+|..|..||++||+
T Consensus 270 ~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~~~~ts~p~IyA~GD~~~~~~~~-~g~~~~~~~~~~A~~qg~~aa~ 348 (480)
T 3cgb_A 270 KADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYMQTNVQDVYAAGDCATHYHVI-KEIHDHIPIGTTANKQGRLAGL 348 (480)
T ss_dssp ECSEEEECSCEEESCGGGTTSCCCBCTTSCBCCCTTSBCSSTTEEECGGGBCEEBTT-TCSEECCCCHHHHHHHHHHHHH
T ss_pred EcCEEEECcCCCcChHHHHhCCcccCCCCCEEECCCccCCCCCEEEeeeEEEecCCC-CCcceecchHHHHHHHHHHHHH
Confidence 999999999999999999999999988899999999999999999999999887654 4666777899999999999999
Q ss_pred HhcCCCCCCCC-CccceeccccccEEEEeeCC------CCc--eEEEcCC------c-CCceEEEEEEe--CCEEEEEEE
Q psy2951 1373 NMVEKKTSLST-IPFFWTMLFGVGFRFAGYAA------GHT--QVDIVGD------L-EALKFTAYYSN--ADKVLAILT 1434 (1466)
Q Consensus 1373 ~i~g~~~~~~~-~p~~w~~~~~~~~~~~g~~~------~~~--~~~~~~~------~-~~~~~~~~~~~--~~~~~~~~~ 1434 (1466)
||+|...++.. .+++|+.+++..+..+|+.+ +.+ ...+... + +...|++++++ +++|+|+..
T Consensus 349 ~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~ 428 (480)
T 3cgb_A 349 NMLDKRRAFKGTLGTGIIKFMNLTLARTGLNEKEAKGLHIPYKTVKVDSTNMAGYYPNAKPLYLKLLYRSDTKQLLGGQV 428 (480)
T ss_dssp HHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCEEEEEEEEETTTCBEEEEEE
T ss_pred HhcCCCccCCCccceeEEEECCcEEEEeCCCHHHHHHcCCceEEEEEecCCcccccCCCceEEEEEEEECCCCEEEEEEE
Confidence 99997666643 45789999999999999853 111 1222211 0 12347777764 799999999
Q ss_pred ecCc---HHHHHHHHHHHcCCCCChhcccc
Q psy2951 1435 VGMD---PLAAQFAERIKMQKYIQKDQIEN 1461 (1466)
Q Consensus 1435 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 1461 (1466)
+|.. ..+..+..+|+.+. +.++|.+
T Consensus 429 vg~~~a~e~i~~~~~ai~~~~--~~~~l~~ 456 (480)
T 3cgb_A 429 IGEEGVDKRIDVIAMALFNKM--SIHDLED 456 (480)
T ss_dssp EESSSHHHHHHHHHHHHHTTC--BGGGGGG
T ss_pred ECCccHHHHHHHHHHHHHcCC--CHHHHhh
Confidence 9997 35667788898885 4455544
No 24
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=4e-40 Score=416.38 Aligned_cols=391 Identities=18% Similarity=0.270 Sum_probs=320.4
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhcc---CcccccccChhhhcc-CCcEEEcCCe
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDI---KADSILLRTEEFYKD-NDIHVIKGKK 1141 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~-~~v~~~~~~~ 1141 (1466)
|++|||||||+||++||..|++.+...+|+|||++++++|.++.++..+.. ....+..+..+++.+ .+++++++++
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHE 80 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCE
Confidence 468999999999999999999996556999999999999988776655431 233344455555544 7999999999
Q ss_pred EEEeecCCCCeEEecC---Cc--EEecCeEEEecCCCCCcCCCCCCCC--cEEEecCHHHHHhhhccc--CCCCeEEEEc
Q psy2951 1142 IISDSELNEKKIKLQD---GT--SIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHI--TPESNVVVIG 1212 (1466)
Q Consensus 1142 v~~i~d~~~~~v~~~~---g~--~~~yd~lvlAtG~~~~~~~~~~g~~--~v~~~~~~~~~~~l~~~~--~~~~~vvVvG 1212 (1466)
|+.+ |+..+.+.+.+ +. ++.||+||||||++|+.|++| |.+ +++++++..++..+++.+ ..+++|+|||
T Consensus 81 V~~i-d~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ip-G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViG 158 (565)
T 3ntd_A 81 VVAI-DRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIP-GVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVG 158 (565)
T ss_dssp EEEE-ETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCT-TCCSTTEECCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EEEE-ECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCCCC-CCCCCCEEEeCCHHHHHHHHHHHhhCCCCEEEEEC
Confidence 9999 99999888864 54 789999999999999999999 886 889999998888776543 3478999999
Q ss_pred CCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEec----------------
Q psy2951 1213 SSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN---------------- 1276 (1466)
Q Consensus 1213 ~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~---------------- 1276 (1466)
+|++|+|+|..|++.|.+|+++++.+.+++ .+++++.+.+.+.++++||++++++++++++..
T Consensus 159 gG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~ 237 (565)
T 3ntd_A 159 GGFIGLEMMESLHHLGIKTTLLELADQVMT-PVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAH 237 (565)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEESSSSSCT-TSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTT
T ss_pred CCHHHHHHHHHHHhcCCcEEEEEcCCccch-hcCHHHHHHHHHHHHHCCCEEEeCCeEEEEecccccccccccccccccc
Confidence 999999999999999999999999998887 788999999999999999999999999999831
Q ss_pred --CCCcEEEEEcCCCCeeecCEEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCce
Q psy2951 1277 --EKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKN 1354 (1466)
Q Consensus 1277 --~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~ 1354 (1466)
.++ ...+.+.+|+++++|.||+|+|..|++++++..|+.++.+|+|.||++++|+.|+|||+|||+..+... .|.+
T Consensus 238 ~~~~~-~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~-~g~~ 315 (565)
T 3ntd_A 238 QHIKG-HLSLTLSNGELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFV-TGQA 315 (565)
T ss_dssp CCTTC-EEEEEETTSCEEEESEEEECSCEEECCHHHHHHTCCBCTTSSBCCCTTCBCSSTTEEECGGGBCEEBTT-TCCE
T ss_pred ccCCC-cEEEEEcCCCEEEcCEEEECcCCccchHHHHhCCcccCCCCCEEECCCcccCCCCEEEeeeeEeecccc-CCce
Confidence 233 345778899999999999999999999999888999998899999999999999999999999988765 4677
Q ss_pred eeeecHHHHHHHHHHHHHHhcCCCCCCCCCc-cceeccccccEEEEeeCC------CCc--eEEEcC------C-cCCce
Q psy2951 1355 ASIGHYQLAQYHGRIAALNMVEKKTSLSTIP-FFWTMLFGVGFRFAGYAA------GHT--QVDIVG------D-LEALK 1418 (1466)
Q Consensus 1355 ~~~~~~~~A~~qa~~aa~~i~g~~~~~~~~p-~~w~~~~~~~~~~~g~~~------~~~--~~~~~~------~-~~~~~ 1418 (1466)
.+..+|+.|..||++||+||+|...+|...| ++|+.+|+..+..+|+.+ +.+ ...... . -++..
T Consensus 316 ~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 395 (565)
T 3ntd_A 316 CLVPLAGPANRQGRMAADNMFGREERYQGTQGTAICKVFDLAVGATGKNEKQLKQAGIAFEKVYVHTASHASYYPGAEVV 395 (565)
T ss_dssp ECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTSTTCCEE
T ss_pred eecccHHHHHHHHHHHHHHhcCCCccCCCcccceEEEEcCcEEEEecCCHHHHHHcCCCeEEEEEecCcccCcCCCCceE
Confidence 7788999999999999999999887787655 456889999999999863 222 122211 0 12345
Q ss_pred EEEEEE--eCCEEEEEEEecCcH---HHHHHHHHHHcCCCCChhcccccC
Q psy2951 1419 FTAYYS--NADKVLAILTVGMDP---LAAQFAERIKMQKYIQKDQIENNA 1463 (1466)
Q Consensus 1419 ~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 1463 (1466)
|++..+ ++++++|+..+|... .+..+.-+|+.+ ++.++|++..
T Consensus 396 ~~k~v~~~~~~~ilG~~~~g~~a~~e~i~~~~~ai~~~--~~~~~l~~~~ 443 (565)
T 3ntd_A 396 SFKLLFDPVKGTIFGAQAVGKDGIDKRIDVMAVAQRAG--MTVEQLQHLE 443 (565)
T ss_dssp EEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTT--CBHHHHTTCC
T ss_pred EEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcC--CCHHHHhhhh
Confidence 888877 468999999999864 455566677776 5666665443
No 25
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=5e-40 Score=401.53 Aligned_cols=384 Identities=22% Similarity=0.334 Sum_probs=312.4
Q ss_pred cEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc---cCcccccccChhhhccCCcEEEcCCeEEE
Q psy2951 1068 TFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKADSILLRTEEFYKDNDIHVIKGKKIIS 1144 (1466)
Q Consensus 1068 ~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~v~~ 1144 (1466)
+|||||||+||++||..|++.+...+|+|||++++.+|....+..... ...+++.....+++.+.+++++.+++|..
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 81 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEITA 81 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEEE
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEEE
Confidence 799999999999999999998433499999999988775543332221 13344445556777788999999999999
Q ss_pred eecCCCCeEEecC---Cc--EEecCeEEEecCCCCCcCCCCCCCC--cEEEecCHHHHHhhhcccC--CCCeEEEEcCCH
Q psy2951 1145 DSELNEKKIKLQD---GT--SIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHIT--PESNVVVIGSSF 1215 (1466)
Q Consensus 1145 i~d~~~~~v~~~~---g~--~~~yd~lvlAtG~~~~~~~~~~g~~--~v~~~~~~~~~~~l~~~~~--~~~~vvVvG~g~ 1215 (1466)
+ +...++|.+.+ |+ ++.||+||+|||++|+.|++| |.+ +++++++.+++.++++.+. .+++++|||+|+
T Consensus 82 i-~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~-G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~ 159 (447)
T 1nhp_A 82 I-QPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIP-GKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGY 159 (447)
T ss_dssp E-ETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCST-TTTSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSH
T ss_pred E-eCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCCCC-CCCCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCH
Confidence 9 99989888864 65 389999999999999999999 876 7888889999988887766 689999999999
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecC
Q psy2951 1216 IGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPAD 1295 (1466)
Q Consensus 1216 ~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D 1295 (1466)
+|+|+|..|++.|.+|+++++.+.++.+.+++++.+.+.+.+++.||+++++++|++++ .+ +++..+.+ +|+++++|
T Consensus 160 ~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~-~~-~~v~~v~~-~~~~i~~d 236 (447)
T 1nhp_A 160 IGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYE-GD-GRVQKVVT-DKNAYDAD 236 (447)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEE-CS-SBCCEEEE-SSCEEECS
T ss_pred HHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEE-cc-CcEEEEEE-CCCEEECC
Confidence 99999999999999999999999888777899999999999999999999999999998 33 44444555 56789999
Q ss_pred EEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhc
Q psy2951 1296 LVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMV 1375 (1466)
Q Consensus 1296 ~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~ 1375 (1466)
.||+|+|..|++++++.. ++++.+|+|.||++++|+.|+|||+|||+..+... .|.+.+..+|+.|..||+.||.||+
T Consensus 237 ~vi~a~G~~p~~~~~~~~-~~~~~~G~i~Vd~~~~t~~~~Iya~GD~~~~~~~~-~g~~~~~~~~~~A~~qg~~aa~~i~ 314 (447)
T 1nhp_A 237 LVVVAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNP-ADTEVNIALATNARKQGRFAVKNLE 314 (447)
T ss_dssp EEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCBCSSTTEEECGGGSCEEEGG-GTEEECCCCHHHHHHHHHHHHHTSS
T ss_pred EEEECcCCCCChHHHHhh-hhhcCCCcEEECccccCCCCCEEEeeeEEEeeccC-CCCceechhHHHHHHHHHHHHHhhc
Confidence 999999999999998877 88887889999999999999999999999877654 3566677899999999999999999
Q ss_pred CCCCCCC-CCccceeccccccEEEEeeCC------CCc--eEEEcC----C---cCCceEEEEEEe--CCEEEEEEEecC
Q psy2951 1376 EKKTSLS-TIPFFWTMLFGVGFRFAGYAA------GHT--QVDIVG----D---LEALKFTAYYSN--ADKVLAILTVGM 1437 (1466)
Q Consensus 1376 g~~~~~~-~~p~~w~~~~~~~~~~~g~~~------~~~--~~~~~~----~---~~~~~~~~~~~~--~~~~~~~~~~~~ 1437 (1466)
|...++. ..|++|+.+++..+..+|+.+ +.+ ...... . -++..|++.+++ +++|+|+..+|.
T Consensus 315 g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~ 394 (447)
T 1nhp_A 315 EPVKPFPGVQGSSGLAVFDYKFASTGINEVMAQKLGKETKAVTVVEDYLMDFNPDKQKAWFKLVYDPETTQILGAQLMSK 394 (447)
T ss_dssp SCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHHTCCCEEEEEEEESSCTTCTTCCEEEEEEEECTTTCBEEEEEEEES
T ss_pred CCCCCCCCccccEEEEECCeeeEEecCCHHHHHHcCCceEEEEEEcCCccccCCCCceEEEEEEEECCCCEEEEEEEEcC
Confidence 9765554 458899999999999999853 111 111111 0 023357777765 689999999998
Q ss_pred cH---HHHHHHHHHHcCCCCChhccc
Q psy2951 1438 DP---LAAQFAERIKMQKYIQKDQIE 1460 (1466)
Q Consensus 1438 ~~---~~~~~~~~~~~~~~~~~~~~~ 1460 (1466)
.. .+..+..+|+.+. +.++|.
T Consensus 395 ~~a~e~i~~~~~ai~~~~--~~~~l~ 418 (447)
T 1nhp_A 395 ADLTANINAISLAIQAKM--TIEDLA 418 (447)
T ss_dssp SCCTTHHHHHHHHHHTTC--BHHHHH
T ss_pred ccHHHHHHHHHHHHHcCC--CHHHHh
Confidence 62 4566777888874 444443
No 26
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.9e-40 Score=391.83 Aligned_cols=346 Identities=21% Similarity=0.291 Sum_probs=286.1
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc--cCcccccccCHhHhhhCCcEEEEceEEE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD--IKADSILLRTEEFYKDNDIHVIKGKKII 672 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 672 (1466)
..+|+||||||||++||..|+++| +|+++|++++.+|..+.+...+. .+.+++..+..+++++.+++++.+++|+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g---~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~ 84 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY---EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAK 84 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS---EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEE
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC---CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEE
Confidence 579999999999999999999998 59999999887776665554432 4556677777888888999999998899
Q ss_pred EeccccccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHH
Q psy2951 673 SDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAF 752 (1466)
Q Consensus 673 ~i~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~ 752 (1466)
.+ +...+.|. .++.++.||+||||||++|+.|+++ |.++++++++.+++.++.+.+.++++++|||+|++|+|+|..
T Consensus 85 ~i-d~~~~~V~-~~g~~~~~d~lViATGs~p~~p~i~-G~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~ 161 (367)
T 1xhc_A 85 LI-DRGRKVVI-TEKGEVPYDTLVLATGARAREPQIK-GKEYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGN 161 (367)
T ss_dssp EE-ETTTTEEE-ESSCEEECSEEEECCCEEECCCCSB-TGGGEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHH
T ss_pred EE-ECCCCEEE-ECCcEEECCEEEECCCCCCCCCCCC-CcCCEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHH
Confidence 98 88888888 6788999999999999999999999 866888888888888776554457999999999999999999
Q ss_pred HhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEcccc
Q psy2951 753 CASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGT 832 (1466)
Q Consensus 753 l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 832 (1466)
|++.|.+|+++++.+.++. +++++.+.+.+.++++||++++++++++++ . + .+.+++|+ +++|.||+|+|+
T Consensus 162 l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~-~-~----~v~~~~g~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 162 LAEAGYHVKLIHRGAMFLG--LDEELSNMIKDMLEETGVKFFLNSELLEAN-E-E----GVLTNSGF-IEGKVKICAIGI 232 (367)
T ss_dssp HHHTTCEEEEECSSSCCTT--CCHHHHHHHHHHHHHTTEEEECSCCEEEEC-S-S----EEEETTEE-EECSCEEEECCE
T ss_pred HHhCCCEEEEEeCCCeecc--CCHHHHHHHHHHHHHCCCEEEcCCEEEEEE-e-e----EEEECCCE-EEcCEEEECcCC
Confidence 9999999999999988774 899999999999999999999999999997 2 1 46777887 999999999999
Q ss_pred ccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCCCcCcc
Q psy2951 833 VLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTSLST 912 (1466)
Q Consensus 833 ~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~~~~~~ 912 (1466)
+|++++++.+|++.+ +| |.||+++||+.|+|||+|||+..+... .+++..|..||+.||.||++...++..
T Consensus 233 ~p~~~ll~~~gl~~~-~g-i~Vd~~~~t~~~~IyA~GD~a~~~~~~-------~~~~~~A~~qg~~aa~~i~g~~~~~~~ 303 (367)
T 1xhc_A 233 VPNVDLARRSGIHTG-RG-ILIDDNFRTSAKDVYAIGDCAEYSGII-------AGTAKAAMEQARVLADILKGEPRRYNF 303 (367)
T ss_dssp EECCHHHHHTTCCBS-SS-EECCTTSBCSSTTEEECGGGEEBTTBC-------CCSHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred CcCHHHHHhCCCCCC-CC-EEECCCcccCCCCEEEeEeeeecCCCC-------ccHHHHHHHHHHHHHHHhcCCCccCCC
Confidence 999988898999886 45 999999999999999999998753321 236789999999999999987766666
Q ss_pred cCeee-eeecCceeEEeeccCCCCceeEecccccceEEEEEecCCeEEEEEeecCchhhh
Q psy2951 913 IPFFW-TMLFGVGFRFAGYAAGHTQVDIVGDLEALKFTAYYSNADKVLAILTVGMDPLAA 971 (1466)
Q Consensus 913 ~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~g~~~~~~ 971 (1466)
.+.++ ..+++..+..+|+++.....+ ..|.|+++++++++|++++|......
T Consensus 304 ~~~~~~~~~~~~~~~~vG~~~~~~~~~-------~~~~k~~~~~~~ilG~~~~g~~~~~~ 356 (367)
T 1xhc_A 304 KFRSTVFKFGKLQIAIIGNTKGEGKWI-------EDNTKVFYENGKIIGAVVFNDIRKAT 356 (367)
T ss_dssp SCCEEEEEETTEEEEEEECCSSCEEEE-------ETTEEEEC-----CEEEEESCHHHHH
T ss_pred CCCceEEEECCceEEEECCCCCCCccc-------ceEEEEEEECCEEEEEEEECChHHHH
Confidence 54444 457788888999876522211 45889999889999999999876543
No 27
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=3.7e-39 Score=396.49 Aligned_cols=383 Identities=22% Similarity=0.339 Sum_probs=296.4
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCccchhcccCc-----------------ccccccChh
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKA-----------------DSILLRTEE 104 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~ 104 (1466)
.++||||||||+||++||..|++.++...|+++++++..+|.++++++.+.... ..+......
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPS 89 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGG
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchH
Confidence 457999999999999999999998766777778888888888887666542110 001111111
Q ss_pred hh---------hcCCeEEEeCceEEEeccccccEEEecCCcEEecCEEEEccCCCCCCCCCCCC-----CCcEEEecCHH
Q psy2951 105 FY---------KDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADG-----VNKVFYLRTVE 170 (1466)
Q Consensus 105 ~~---------~~~~v~~~~~~~v~~~~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~~-----~~~~~~~~~~~ 170 (1466)
++ .+.+++++.++.+.. .+...++|.++++.++.||+||||||++|+.++.+++ ...++++++.+
T Consensus 90 ~~~~~~~l~~~~~~gv~~~~g~~v~~-id~~~~~V~~~~g~~i~yd~lviATGs~p~~~~~~~~~~~~~~~~v~~~~~~~ 168 (493)
T 1m6i_A 90 FYVSAQDLPHIENGGVAVLTGKKVVQ-LDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIG 168 (493)
T ss_dssp GSBCTTTTTTSTTCEEEEEETCCEEE-EEGGGTEEEETTSCEEEEEEEEECCCEEECCCHHHHTSCHHHHHTEEECCSHH
T ss_pred hhcchhhhhhhhcCCeEEEcCCEEEE-EECCCCEEEECCCCEEECCEEEECCCCCCCCCCCcccccccccCceEEEcCHH
Confidence 11 256899999977764 3556688999999999999999999999986653332 23577888998
Q ss_pred HHHhhcccCCCCCcEEEECCCHhHHHHHHHHhh----CCCEEEEEeecCcccccccCHHHHHHHHHHHHhCCcEEEcCce
Q psy2951 171 DANNIAPHITPESNVVVIGSSFIGMEAAAFCAS----KVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKAN 246 (1466)
Q Consensus 171 ~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~----~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~ 246 (1466)
++..++..+..+++++|||+|++|+|+|..|++ .|.+|+++++.+.++.+.+++++.+.+.+.++++||++++++.
T Consensus 169 d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~ 248 (493)
T 1m6i_A 169 DFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAI 248 (493)
T ss_dssp HHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCC
T ss_pred HHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCE
Confidence 888877665567899999999999999999876 5789999998876666677889999999999999999999999
Q ss_pred EEEEEecCCCCeEEEEcCCCcEEeccEEEEeeccccCccccccCCceecC-CccEEECCCCCcCCCCEEEecccccccCc
Q psy2951 247 VSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNG-QKAVVVNEYLETNVPGVYAGGDIAYAPLH 325 (1466)
Q Consensus 247 v~~i~~~~~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~gl~~~~-~g~i~vd~~~~t~~~~iya~GD~~~~~~~ 325 (1466)
|++++.++ +. ..+.+.+|+++++|.||+|+|++||+++++..|+++++ +|+|.||+++|| .|+|||+|||+..+..
T Consensus 249 V~~i~~~~-~~-~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~~ggi~Vd~~l~t-~~~IyA~GD~a~~~~~ 325 (493)
T 1m6i_A 249 VQSVGVSS-GK-LLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQA-RSNIWVAGDAACFYDI 325 (493)
T ss_dssp EEEEEEET-TE-EEEEETTSCEEEESEEEECCCEEECCTTHHHHTCCBCTTTCSEECCTTCEE-ETTEEECGGGEEEEET
T ss_pred EEEEEecC-Ce-EEEEECCCCEEECCEEEECCCCCccHHHHHHcCCccccCCCcEEECCCccc-CCCeeEeeeeEeccCc
Confidence 99998643 22 35778889999999999999999999999888999885 588999999998 5999999999986532
Q ss_pred cCCCCcceeccHHHHHHHHHHHHHHhcCCCCCCCCCCccccccc-ceeeEEEEe----------ecCC---ceE------
Q psy2951 326 SFYNKNASIGHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTMLF-GVGFRFAGY----------AAGH---TQV------ 385 (1466)
Q Consensus 326 ~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~p~~~s~~~-~~~~~~~G~----------~~~~---~~~------ 385 (1466)
. .|. .+..+|..|+.||+.||.||++....|...||+||.|+ ..++..+|. .... +..
T Consensus 326 ~-~g~-~~~~~~~~A~~qg~~aa~ni~g~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~G~~~~~~~~~~~~~~~~~ 403 (493)
T 1m6i_A 326 K-LGR-RRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSATEQ 403 (493)
T ss_dssp T-TEE-ECCCCHHHHHHHHHHHHHHHTSCCCCCCCCCEEEEESSTTCEEEEEECCCTTSCEEEEEECCCTTCSHHHHHHH
T ss_pred c-cCc-cccchHHHHHHHHHHHHHHhcCCCCCcCCcCceeeeeccCcceEEEeccCCCcceEEeeccccccccccccccc
Confidence 2 232 35678999999999999999999888999999999998 455555543 2110 000
Q ss_pred ---EEe-------------------cc-------cCCCeEEEEEEcCCEEEEEEEECCCHHHHHHHHHHhcCCCc
Q psy2951 386 ---DIV-------------------GD-------LEALKFTAYYSNADKVLAILTVGMDPLAAQFAEQVLEFPYS 431 (1466)
Q Consensus 386 ---~~~-------------------g~-------~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~i~~~~~ 431 (1466)
.+. |+ .....|..|++++++++|++.||. +.....++.+|+.+..
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~li~~~~~ 477 (493)
T 1m6i_A 404 SGTGIRSESETESEASEITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVLWNI-FNRMPIARKIIKDGEQ 477 (493)
T ss_dssp HSCSCHHHHSCSCCCC--------------------CCEEEEEEEETTEEEEEEEESC-CSCHHHHHHHHHHCCB
T ss_pred ccccccccccccccccccccccccccccccccccccCCcEEEEEEeCCEEEEEEEecC-cchHHHHHHHHhCCCC
Confidence 011 11 113456789999999999999995 5566777788876654
No 28
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=1.9e-38 Score=387.68 Aligned_cols=364 Identities=20% Similarity=0.223 Sum_probs=287.8
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc---cCcccccccCHhHhhhCCcEEEEceEEE
Q psy2951 596 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKADSILLRTEEFYKDNDIHVIKGKKII 672 (1466)
Q Consensus 596 ~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 672 (1466)
+||+|||||+||++||..|++++...+|+++|+++.++|..+.+..... ...+++.....+++.+.+++++.+++|.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 6999999999999999999999544569999999888876665544333 2345556667788899999999999999
Q ss_pred EeccccccEEEcc---CCCEEecCEEEEcCCCCCCcCCCCCCCC--cEEEecCHHHHHhhcccCCCCCcEEEECCChHHH
Q psy2951 673 SDSELNEKKIKLQ---DGTSIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGM 747 (1466)
Q Consensus 673 ~i~~~~~~~v~~~---~~~~~~~d~lviAtG~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~ 747 (1466)
.+ +...+.+.+. ++.++.||+||||||++|+.|+++ |.+ .+++.++..++..+......+++++|||+|++|+
T Consensus 83 ~i-d~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p~i~-g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~ 160 (452)
T 3oc4_A 83 AM-DVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIR-GSQTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGM 160 (452)
T ss_dssp EE-ETTTTEEEEEETTEEEEEECSEEEECCCCCBCCCCCB-TTTCTTEEEGGGCC----CCHHHHTCSEEEEECCSHHHH
T ss_pred EE-ECCCCEEEEEecCceEEEEcCEEEECCCcccCCCCCC-CCCCCCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHH
Confidence 99 8887777652 556899999999999999999999 876 6777777666665555555689999999999999
Q ss_pred HHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEE
Q psy2951 748 EAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVI 827 (1466)
Q Consensus 748 e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi 827 (1466)
|+|..|++.|.+|+++++.+.++...+++++.+.+.+.++++||++++++++++++.. ++++ .+.++++ ++++|.||
T Consensus 161 E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~~~g-~i~aD~Vv 237 (452)
T 3oc4_A 161 EAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEET-ANGI-VLETSEQ-EISCDSGI 237 (452)
T ss_dssp HHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEEC-SSCE-EEEESSC-EEEESEEE
T ss_pred HHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEcc-CCeE-EEEECCC-EEEeCEEE
Confidence 9999999999999999999988866689999999999999999999999999999843 4445 6777776 89999999
Q ss_pred EccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCC
Q psy2951 828 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK 907 (1466)
Q Consensus 828 ~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~ 907 (1466)
+|+|++|++++++.. ++++++|+|.||+++||+.|+|||+|||+..+... .+.+.++++++.|..||+.||.||++..
T Consensus 238 ~A~G~~p~~~~l~~~-~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~-~~~~~~~~~~~~A~~~g~~aa~~i~g~~ 315 (452)
T 3oc4_A 238 FALNLHPQLAYLDKK-IQRNLDQTIAVDAYLQTSVPNVFAIGDCISVMNEP-VAETFYAPLVNNAVRTGLVVANNLEEKT 315 (452)
T ss_dssp ECSCCBCCCSSCCTT-SCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEEGG-GTEEECCCCHHHHHHHHHHHTTSSSSCC
T ss_pred ECcCCCCChHHHHhh-hccCCCCCEEECcCccCCCCCEEEEEeeEEecccc-CCceeecchHHHHHHHHHHHHHHhcCCC
Confidence 999999999988765 88889999999999999999999999999876543 3445556788999999999999999876
Q ss_pred CcCcc-cCeeeeeecCceeEEeeccCCCCce----eEecc---------cccceEEEEEec--CCeEEEEEeecC
Q psy2951 908 TSLST-IPFFWTMLFGVGFRFAGYAAGHTQV----DIVGD---------LEALKFTAYYSN--ADKVLAILTVGM 966 (1466)
Q Consensus 908 ~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~---------~~~~~~~~~~~~--~~~i~g~~~~g~ 966 (1466)
..++. .+..++.+|+..+..+|+++...+. +.... -++..|+|++++ +++++|++++|.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~ 390 (452)
T 3oc4_A 316 HRFIGSLRTMGTKVGDYYLASTGLTETEGLFFPQTLASIIVRQPAPPLQHGTEILGKLIYDKVTQRVLGAQLCSK 390 (452)
T ss_dssp CCCCCCCCCEEEEETTEEEEEEECCSGGGGGSSSCEEEEEEEEECTTTTCSCEEEEEEEEETTTCBEEEEEEEES
T ss_pred ccCCCccccEEEEEcCeeEEEecCCHHHHHHCCCceEEEEEecCCccCCCCCeEEEEEEEECCCCEEEEEEEEeC
Confidence 65542 3344566788888889987632110 10000 124679999884 599999999998
No 29
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=2e-38 Score=387.54 Aligned_cols=366 Identities=21% Similarity=0.296 Sum_probs=289.5
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc--cCcccccccCHhHh-hhCCcEEEEceEE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD--IKADSILLRTEEFY-KDNDIHVIKGKKI 671 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~gv~~~~~~~v 671 (1466)
+++|+|||||+||+++|+.|++++...+|+++|+++.+++..+.+...+. ...+++..+..+.+ ++.+++++.+++|
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 57999999999999999999999665669999999877766554443332 23444555454555 6789999999889
Q ss_pred EEeccccccEEEccCC-CEEecCEEEEcCCCCCCcCCCCCCCC--cEEEecCHHHHHhhcccCC--CCCcEEEECCChHH
Q psy2951 672 ISDSELNEKKIKLQDG-TSIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHIT--PESNVVVIGSSFIG 746 (1466)
Q Consensus 672 ~~i~~~~~~~v~~~~~-~~~~~d~lviAtG~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~--~~~~vvVvG~G~~g 746 (1466)
..+ +...+.+.+.++ .++.||+||||||++|+.|+++ |.+ +++..++..++..+.+... .+++++|||+|++|
T Consensus 83 ~~i-~~~~~~v~~~~g~~~~~~d~lviAtG~~p~~p~i~-G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g 160 (449)
T 3kd9_A 83 IEV-DTGYVRVRENGGEKSYEWDYLVFANGASPQVPAIE-GVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIG 160 (449)
T ss_dssp EEE-CSSEEEEECSSSEEEEECSEEEECCCEEECCCSCB-TTTSTTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHH
T ss_pred EEE-ecCCCEEEECCceEEEEcCEEEECCCCCCCCCCCC-CCCCCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHH
Confidence 999 888888888776 4899999999999999999998 876 6787888888877766554 68999999999999
Q ss_pred HHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEE
Q psy2951 747 MEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLV 826 (1466)
Q Consensus 747 ~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~v 826 (1466)
+|+|..|++.|.+|+++++.++++...+++++.+.+.+.+++. |++++++.+.+++.. + .+..+ +.+++++++|.|
T Consensus 161 ~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~-~-~v~~v-~~~g~~i~~D~V 236 (449)
T 3kd9_A 161 IEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEGE-E-RVEKV-VTDAGEYKAELV 236 (449)
T ss_dssp HHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEECS-S-SCCEE-EETTEEEECSEE
T ss_pred HHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEecc-C-cEEEE-EeCCCEEECCEE
Confidence 9999999999999999999998886558999999999999999 999999999999843 2 33333 446779999999
Q ss_pred EEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccC
Q psy2951 827 IVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEK 906 (1466)
Q Consensus 827 i~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~ 906 (1466)
|+|+|++|++++++.+|++++++|+|.||++++|+.|+|||+|||+..+... +|.+..+++++.|..||+.+|.||+|.
T Consensus 237 v~a~G~~p~~~l~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~-~g~~~~~~l~~~A~~~g~~aa~~i~g~ 315 (449)
T 3kd9_A 237 ILATGIKPNIELAKQLGVRIGETGAIWTNEKMQTSVENVYAAGDVAETRHVI-TGRRVWVPLAPAGNKMGYVAGSNIAGK 315 (449)
T ss_dssp EECSCEEECCHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBCEEBTT-TCSEECCCCHHHHHHHHHHHHHHHTTC
T ss_pred EEeeCCccCHHHHHhCCccCCCCCCEEECCCCccCCCCEEEeeeeeeecccc-CCceEEeccHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999877654 455666788999999999999999998
Q ss_pred CCcCcc-cCeeeeeecCceeEEeeccCC------CCcee--Eec------c-cccceEEEEEec--CCeEEEEEeecCc
Q psy2951 907 KTSLST-IPFFWTMLFGVGFRFAGYAAG------HTQVD--IVG------D-LEALKFTAYYSN--ADKVLAILTVGMD 967 (1466)
Q Consensus 907 ~~~~~~-~~~~~~~~~~~~~~~~g~~~~------~~~~~--~~~------~-~~~~~~~~~~~~--~~~i~g~~~~g~~ 967 (1466)
...++. .+++|+.+++..+..+|+++. .+-.. ... . -++..|+|++++ +++++|++++|..
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~ 394 (449)
T 3kd9_A 316 ELHFPGVLGTAVTKFMDVEIGKTGLTEMEALKEGYDVRTAFIKASTRPHYYPGGREIWLKGVVDNETNRLLGVQVVGSD 394 (449)
T ss_dssp CCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESS
T ss_pred CccCCCcccceEEEEcCcEEEEecCCHHHHHHCCCceEEEEEecCCccccCCCCceEEEEEEEECCCCEEEEEEEEChH
Confidence 766644 466777889989999998752 11111 000 0 124578999884 4899999999988
No 30
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=2e-38 Score=387.85 Aligned_cols=365 Identities=22% Similarity=0.323 Sum_probs=296.3
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc---c--CcccccccCHhHhhhCCcEEEEceE
Q psy2951 596 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---I--KADSILLRTEEFYKDNDIHVIKGKK 670 (1466)
Q Consensus 596 ~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~gv~~~~~~~ 670 (1466)
+||+|||||+||++||..|++++...+|+++|+++..++..+.+..... . +.+++.....+++++.+++++.+++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 80 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQ 80 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCE
Confidence 5899999999999999999999333449999998876665554332221 1 3555666667788889999999998
Q ss_pred EEEeccccccEEEccC-----CCEEecCEEEEcCCCCCCcCCCCCCCC--cEEEecCHHHHHhhcccCCCCCcEEEECCC
Q psy2951 671 IISDSELNEKKIKLQD-----GTSIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGSS 743 (1466)
Q Consensus 671 v~~i~~~~~~~v~~~~-----~~~~~~d~lviAtG~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G 743 (1466)
|..+ +...+.+.+.+ +.++.||+||||||++|+.|+++ |.+ ++++++++.+...+.+....+++++|||+|
T Consensus 81 v~~i-~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~-g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG 158 (452)
T 2cdu_A 81 VTNV-DPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIP-GIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSG 158 (452)
T ss_dssp EEEE-EGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCT-TTTSTTEEECSSHHHHHHHHHHGGGCSEEEEECCS
T ss_pred EEEE-EcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCCCC-CCCCCCEEEeCcHHHHHHHHHHhccCCeEEEECcC
Confidence 9988 77677777643 45799999999999999999998 875 688888888887776666679999999999
Q ss_pred hHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEec
Q psy2951 744 FIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPA 823 (1466)
Q Consensus 744 ~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~ 823 (1466)
++|+|+|..|++.|.+|+++++.+.++...+++++.+.+.+.++++||++++++++++++. +++++..+.+ +|+++++
T Consensus 159 ~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~~v~~v~~-~g~~i~~ 236 (452)
T 2cdu_A 159 YIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEE-VDDEIITKTL-DGKEIKS 236 (452)
T ss_dssp HHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEE-ETTEEEEEET-TSCEEEE
T ss_pred HHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEc-CCCeEEEEEe-CCCEEEC
Confidence 9999999999999999999999998886578999999999999999999999999999984 2445555666 7789999
Q ss_pred CEEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHh
Q psy2951 824 DLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNM 903 (1466)
Q Consensus 824 D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i 903 (1466)
|.||+|+|++|++++++.. ++++++|+|.||+++||+.|+|||+|||+..+... .+.+.++++++.|..||+.||.||
T Consensus 237 D~vv~a~G~~p~~~ll~~~-l~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~~~-~g~~~~~~~~~~A~~~g~~aa~~i 314 (452)
T 2cdu_A 237 DIAILCIGFRPNTELLKGK-VAMLDNGAIITDEYMHSSNRDIFAAGDSAAVHYNP-TNSNAYIPLATNAVRQGRLVGLNL 314 (452)
T ss_dssp SEEEECCCEEECCGGGTTT-SCBCTTSCBCCCTTSBCSSTTEEECSTTBCEEETT-TTEEECCCCHHHHHHHHHHHHHTS
T ss_pred CEEEECcCCCCCHHHHHHh-hhcCCCCCEEECCCcCcCCCCEEEcceEEEecccc-CCCeeecchHHHHHHHHHHHHHHh
Confidence 9999999999999998887 88888999999999999999999999999876543 344556678999999999999999
Q ss_pred ccCCCcCc-ccCeeeeeecCceeEEeeccCCCC-----cee---Ee----cc---cccceEEEEEe--cCCeEEEEEeec
Q psy2951 904 VEKKTSLS-TIPFFWTMLFGVGFRFAGYAAGHT-----QVD---IV----GD---LEALKFTAYYS--NADKVLAILTVG 965 (1466)
Q Consensus 904 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~-----~~~---~~----~~---~~~~~~~~~~~--~~~~i~g~~~~g 965 (1466)
++....+. ..+++|+.+|+..+..+|+++... +.. .. .. .+...|.|+++ ++++++|++++|
T Consensus 315 ~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g 394 (452)
T 2cdu_A 315 TEDKVKDMGTQSSSGLKLYGRTYVSTGINTALAKANNLKVSEVIIADNYRPEFMLSTDEVLMSLVYDPKTRVILGGALSS 394 (452)
T ss_dssp SSCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTBSCCCEEEEEEEECTTTCBEEEEEEEE
T ss_pred CCCCCcCCCccceEEEEECCeeeEeecCCHHHHHHcCCceEEEEEecCCccccCCCCceEEEEEEEECCCCEEEEEEEEc
Confidence 98765544 356778888988889999764211 111 00 00 12346888888 368999999999
Q ss_pred C
Q psy2951 966 M 966 (1466)
Q Consensus 966 ~ 966 (1466)
.
T Consensus 395 ~ 395 (452)
T 2cdu_A 395 M 395 (452)
T ss_dssp S
T ss_pred C
Confidence 8
No 31
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=3.2e-38 Score=388.41 Aligned_cols=367 Identities=20% Similarity=0.307 Sum_probs=281.6
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc---cCcccc------cccCHhHhh-hCCcE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKADSI------LLRTEEFYK-DNDIH 664 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~------~~~~~~~~~-~~gv~ 664 (1466)
+++|+|||||+||++||+.|++++...+|+++|+++.++|..+.+...+. ...+.+ .....+++. +.+++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 47999999999999999999999544559999999888777665544332 122333 233334444 57999
Q ss_pred EEEceEEEEeccccccEEEccC---CC--EEecCEEEEcCCCCCCcCCCCCCCC--cEEEecCHHHHHhhcccCC--CCC
Q psy2951 665 VIKGKKIISDSELNEKKIKLQD---GT--SIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHIT--PES 735 (1466)
Q Consensus 665 ~~~~~~v~~i~~~~~~~v~~~~---~~--~~~~d~lviAtG~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~--~~~ 735 (1466)
++.+++|..+ +...+.+.+.+ +. ++.||+||||||++|+.|+++ |.+ +++.+.+..++..+...+. .++
T Consensus 83 ~~~~~~V~~i-d~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~-G~~~~~v~~~~~~~~~~~l~~~l~~~~~~ 160 (472)
T 3iwa_A 83 ALVETRAHAI-DRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVE-GMDLAGVTPVTNLDEAEFVQHAISAGEVS 160 (472)
T ss_dssp EECSEEEEEE-ETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCSCT-TTTSBTEEECCSHHHHHHHHHHCCTTSCS
T ss_pred EEECCEEEEE-ECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCCCC-CCCCCCEEEeCCHHHHHHHHHHhhcCCCC
Confidence 9999999999 88888777654 55 799999999999999999999 875 7888888888877765553 489
Q ss_pred cEEEECCChHHHHHHHHHhcc-CCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEE
Q psy2951 736 NVVVIGSSFIGMEAAAFCASK-VKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAAN 814 (1466)
Q Consensus 736 ~vvVvG~G~~g~e~A~~l~~~-g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~ 814 (1466)
+++|||+|++|+|+|..|++. |.+|+++++.+.++...+++++.+.+.+.+++.||++++++++++++. +++.+ .+.
T Consensus 161 ~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v-~v~ 238 (472)
T 3iwa_A 161 KAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEG-ENGKV-ARV 238 (472)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBE-EEE
T ss_pred EEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEc-cCCeE-EEE
Confidence 999999999999999999999 999999999998875588999999999999999999999999999984 34444 377
Q ss_pred CCCCcEEecCEEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHH
Q psy2951 815 LDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQY 894 (1466)
Q Consensus 815 ~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~ 894 (1466)
+.+|+++++|.||+|+|++|++++++.+|++++++|+|.||++++|+.|+|||+|||+..+... .|.+..+++++.|..
T Consensus 239 ~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~-~g~~~~~~~~~~A~~ 317 (472)
T 3iwa_A 239 ITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRTSDPDIFAGGDCVTIPNLV-TGKPGFFPLGSMANR 317 (472)
T ss_dssp EESSCEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEECCTTCBCSSTTEEECGGGEEEEBTT-TSSEECCCCTTHHHH
T ss_pred EeCCCEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEEECCCcccCCCCEEEeccceeccccc-CCceeecchHHHHHH
Confidence 7888899999999999999999888888999999999999999999999999999999877654 455666778899999
Q ss_pred HHHHHHHHhccCCCcCc-ccCeeeeeecCceeEEeeccCC------CCce--eEec------c-cccceEEEEEe--cCC
Q psy2951 895 HGRIAALNMVEKKTSLS-TIPFFWTMLFGVGFRFAGYAAG------HTQV--DIVG------D-LEALKFTAYYS--NAD 956 (1466)
Q Consensus 895 ~g~~aA~~i~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~------~~~~--~~~~------~-~~~~~~~~~~~--~~~ 956 (1466)
||++||+||+|....+. .+|++++.+|+..+..+|+++. .+-. .... . -++..|+|+++ +++
T Consensus 318 ~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~ 397 (472)
T 3iwa_A 318 QGRVIGTNLADGDATFPGAVGSWAVKLFEGSASGAGLTVEGALREGYDAVNVHVEQFDRAHFYPEKTIMTLQLVVDRPTR 397 (472)
T ss_dssp HHHHHHHHHTTCCCCCCCBCCCEEEECSSCEEEEEECCHHHHHHTTCCEEEEEEEC-----------CEEEEEEEETTTC
T ss_pred HHHHHHHHhcCCCccCCCCCcceEEEECCceeEEEECCHHHHHHcCCceEEEEEecCCccCccCCCceEEEEEEEECCCC
Confidence 99999999999876665 4566777788888999998752 1111 1100 0 13457889988 579
Q ss_pred eEEEEEeecC
Q psy2951 957 KVLAILTVGM 966 (1466)
Q Consensus 957 ~i~g~~~~g~ 966 (1466)
+++|++++|.
T Consensus 398 ~ilG~~~~g~ 407 (472)
T 3iwa_A 398 RVLGIQGFST 407 (472)
T ss_dssp BEEEEEEEES
T ss_pred EEEEEEEECC
Confidence 9999999999
No 32
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=4.4e-38 Score=387.95 Aligned_cols=365 Identities=18% Similarity=0.252 Sum_probs=294.3
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcC-CCccEEEEcCCCCCCCCCCccchhcc---cCcccccccCHhHhhhCCcEEEEceE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNG-FTGKLYFITDENFLPYDRVKLSKQLD---IKADSILLRTEEFYKDNDIHVIKGKK 670 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g-~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~gv~~~~~~~ 670 (1466)
++||+|||||+||+++|..|+++| ...+|+++|+++..++..+.+...+. ...+++.....+.+++.+++++.+++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~ 114 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESP 114 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCE
Confidence 489999999999999999999998 44459999998876665544332222 23445555667778889999999998
Q ss_pred EEEeccccccEEEcc-C--CCEEecCEEEEcCCCCCCcCCCCCCCC-------------cEEEecCHHHHHhhcccC--C
Q psy2951 671 IISDSELNEKKIKLQ-D--GTSIDFTKIYLATGSSPRTISQADGVN-------------KVFYLRTVEDANNIAPHI--T 732 (1466)
Q Consensus 671 v~~i~~~~~~~v~~~-~--~~~~~~d~lviAtG~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~--~ 732 (1466)
|..+ +...+.+.+. + +.++.||+||||||++|+.|+++ |.+ ++++++++.++..+.+.. .
T Consensus 115 v~~i-~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~-G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~ 192 (490)
T 2bc0_A 115 VQSI-DYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIK-GAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENK 192 (490)
T ss_dssp EEEE-ETTTTEEEEEETTEEEEEECSEEEECCCEEECCCSCB-TCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTST
T ss_pred EEEE-ECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCCCC-CccccccccccccccCCEEEeCCHHHHHHHHHHhhhc
Confidence 9998 7777777765 4 35799999999999999999988 754 588888888887776666 5
Q ss_pred CCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEE
Q psy2951 733 PESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTA 812 (1466)
Q Consensus 733 ~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~ 812 (1466)
.+++|+|||+|++|+|+|..|++.|.+|+++++.+.++...+++++.+.+.+.+++.||++++++++++++. ++++..
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~ 270 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAG--NGKVEK 270 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEEC--SSSCCE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEc--CCcEEE
Confidence 799999999999999999999999999999999998876578999999999999999999999999999984 334434
Q ss_pred EECCCCcEEecCEEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHH
Q psy2951 813 ANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLA 892 (1466)
Q Consensus 813 v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A 892 (1466)
+.+ +|+++++|.||+|+|++|++++++.. ++++++|+|.||+++||+.|+|||+|||+..+... .+.+..++++..|
T Consensus 271 v~~-~g~~i~~D~Vi~a~G~~p~~~ll~~~-l~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~~~~-~g~~~~~~~~~~A 347 (490)
T 2bc0_A 271 IIT-DKNEYDVDMVILAVGFRPNTTLGNGK-IDLFRNGAFLVNKRQETSIPGVYAIGDCATIYDNA-TRDTNYIALASNA 347 (490)
T ss_dssp EEE-SSCEEECSEEEECCCEEECCGGGTTC-SCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEETT-TTEEECCCCHHHH
T ss_pred EEE-CCcEEECCEEEECCCCCcChHHHHhh-hccCCCCCEEECCCcccCCCCEEEeeeeEEecccc-CCceeecccHHHH
Confidence 455 67899999999999999999988877 88888999999999999999999999999876543 3445556789999
Q ss_pred HHHHHHHHHHhccCCCcCc-ccCeeeeeecCceeEEeeccCCCC-----ceeE-------ecc--c--ccceEEEEEe--
Q psy2951 893 QYHGRIAALNMVEKKTSLS-TIPFFWTMLFGVGFRFAGYAAGHT-----QVDI-------VGD--L--EALKFTAYYS-- 953 (1466)
Q Consensus 893 ~~~g~~aA~~i~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~-------~~~--~--~~~~~~~~~~-- 953 (1466)
..||+.||.||++....+. ..+++|+.+|+..+..+|+++... +... ... . +...|.|+++
T Consensus 348 ~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~ 427 (490)
T 2bc0_A 348 VRTGIVAAHNACGTDLEGIGVQGSNGISIYGLHMVSTGLTLEKAKRLGFDAAVTEYTDNQKPEFIEHGNFPVTIKIVYDK 427 (490)
T ss_dssp HHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTCCSSCCEEEEEEEEET
T ss_pred HHHHHHHHHHhcCCCCCCCCcccceEEEECCcEeEEeeCCHHHHHHcCCceEEEEEecCCcccccCCCCceEEEEEEEEC
Confidence 9999999999998764443 356677778888888899764211 1110 011 1 2346888888
Q ss_pred cCCeEEEEEeecC
Q psy2951 954 NADKVLAILTVGM 966 (1466)
Q Consensus 954 ~~~~i~g~~~~g~ 966 (1466)
++++++|++++|.
T Consensus 428 ~~~~ilG~~~~g~ 440 (490)
T 2bc0_A 428 DSRRILGAQMAAR 440 (490)
T ss_dssp TTCBEEEEEEEES
T ss_pred CCCEEEEEEEEcC
Confidence 4699999999998
No 33
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=9.5e-38 Score=395.09 Aligned_cols=388 Identities=20% Similarity=0.298 Sum_probs=315.2
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhcc---CcccccccCh-hhhccCCcEEEcCC
Q psy2951 1065 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDI---KADSILLRTE-EFYKDNDIHVIKGK 1140 (1466)
Q Consensus 1065 ~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~-~~~~~~~v~~~~~~ 1140 (1466)
.+++|||||||+||++||..|++.+...+|+|||++++.+|.++.++..+.. ....+..... .+.++.++++++++
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 114 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLS 114 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSE
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECC
Confidence 4578999999999999999999995445999999999999988766655431 2233333333 44557899999999
Q ss_pred eEEEeecCCCCeEEec---CCc--EEecCeEEEecCCCCCcCCCCCCC-C--cEEEecCHHHHHhhhcccC--CCCeEEE
Q psy2951 1141 KIISDSELNEKKIKLQ---DGT--SIDFTKIYLATGSSPRTISQADGV-N--KVFYLRTVEDANNIAPHIT--PESNVVV 1210 (1466)
Q Consensus 1141 ~v~~i~d~~~~~v~~~---~g~--~~~yd~lvlAtG~~~~~~~~~~g~-~--~v~~~~~~~~~~~l~~~~~--~~~~vvV 1210 (1466)
+|+.+ ++..+.+.+. +|. .+.||+||+|||++|+.|++| |. + ++++.++..++.++++.+. .+++++|
T Consensus 115 ~V~~i-d~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~-G~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvV 192 (588)
T 3ics_A 115 EVVKI-NKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIP-GIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATV 192 (588)
T ss_dssp EEEEE-ETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCT-TTTTCTTEEECSSHHHHHHHHHHHHHHCCSEEEE
T ss_pred EEEEE-ECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCCCCC-CcccCCCeEEeCCHHHHHHHHHHHhhcCCCeEEE
Confidence 99999 9999988875 465 789999999999999999999 88 4 8999999999888766542 4899999
Q ss_pred EcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCC
Q psy2951 1211 IGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGT 1290 (1466)
Q Consensus 1211 vG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~ 1290 (1466)
||+|++|+|+|..|++.|.+|+++++.+.+++. +++++.+.+.+.+++.||+++++++|++++ .++ . .|.+.+|+
T Consensus 193 iGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~~~-~--~v~~~~g~ 267 (588)
T 3ics_A 193 IGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-IDYEMAAYVHEHMKNHDVELVFEDGVDALE-ENG-A--VVRLKSGS 267 (588)
T ss_dssp ECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHTTCEEECSCCEEEEE-GGG-T--EEEETTSC
T ss_pred ECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-CCHHHHHHHHHHHHHcCCEEEECCeEEEEe-cCC-C--EEEECCCC
Confidence 999999999999999999999999999988874 889999999999999999999999999998 332 2 47889999
Q ss_pred eeecCEEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHH
Q psy2951 1291 TIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIA 1370 (1466)
Q Consensus 1291 ~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~a 1370 (1466)
++++|.||+|+|..|++++++..|+.++.+|+|.||++++|+.|+|||+|||+..+... .|.+.....|+.|..||++|
T Consensus 268 ~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~-~g~~~~~~~~~~A~~~g~~a 346 (588)
T 3ics_A 268 VIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQTSDPHIYAIGDAIEVKDFV-TETETMIPLAWPANRQGRML 346 (588)
T ss_dssp EEECSEEEECSCEEECCHHHHHTTCCBCGGGCBCCCTTSBCSSTTEEECGGGBCEEBTT-TCCEECCCCHHHHHHHHHHH
T ss_pred EEEcCEEEEccCCCCChHHHHhcCceEcCCCCEEECCccccCCCCEEEeeeeeeccccc-CCcccccccHHHHHHHHHHH
Confidence 99999999999999999999999999998899999999999999999999999887764 46677788999999999999
Q ss_pred HHHhcC-CCCCCC-CCccceeccccccEEEEeeCC------CCc--eEEEc--CC----c-CCceEEEEEEe--CCEEEE
Q psy2951 1371 ALNMVE-KKTSLS-TIPFFWTMLFGVGFRFAGYAA------GHT--QVDIV--GD----L-EALKFTAYYSN--ADKVLA 1431 (1466)
Q Consensus 1371 a~~i~g-~~~~~~-~~p~~w~~~~~~~~~~~g~~~------~~~--~~~~~--~~----~-~~~~~~~~~~~--~~~~~~ 1431 (1466)
|+||+| ....+. .+|..+...++..+-.+|+.+ +.+ ..... +. + ++..|++..++ +++|+|
T Consensus 347 a~~i~g~~~~~~~~~~~~~~~~~~~~~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~ilG 426 (588)
T 3ics_A 347 ADIIHGHTDSLYKGTLGTSVAKVFDLTVATTGLNEKILKRLNIPYEVVHVQANSHAGYYPNATPVLIKLIFNKDSGKIYG 426 (588)
T ss_dssp HHHHTTCCSSCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTSTTCCEEEEEEEECTTTCBEEE
T ss_pred HHHhcCCCccccCCcccceEEEECCeEEEEecCCHHHHHHcCCCeEEEEEecCCccccCCCCceEEEEEEEECCCCeEEE
Confidence 999999 655554 456667777888888888753 222 11111 10 0 23458888774 689999
Q ss_pred EEEecCc---HHHHHHHHHHHcCCCCChhccccc
Q psy2951 1432 ILTVGMD---PLAAQFAERIKMQKYIQKDQIENN 1462 (1466)
Q Consensus 1432 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 1462 (1466)
+..+|.. ..+..+.-+|+.+ ++.++|++.
T Consensus 427 ~~~~g~~~~~e~i~~~~~ai~~~--~t~~~l~~~ 458 (588)
T 3ics_A 427 AQTLGRDGVDKRMDVIATAIKAN--LTVLDLPDL 458 (588)
T ss_dssp EEEEESSSHHHHHHHHHHHHHTT--CBTTTGGGC
T ss_pred EEEEcCCcHHHHHHHHHHHHHcC--CCHHHhhhh
Confidence 9999963 3455666677777 455555443
No 34
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=1.7e-37 Score=392.26 Aligned_cols=369 Identities=18% Similarity=0.278 Sum_probs=299.6
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc---cCcccccccCHhHhh-hCCcEEEEceE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKADSILLRTEEFYK-DNDIHVIKGKK 670 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~gv~~~~~~~ 670 (1466)
+++|+|||||+||++||+.|++++...+|+++++++.++|..+.+..... .....+..+..+.+. +.+++++.+++
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHE 80 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCE
Confidence 36899999999999999999999666679999999988887665554433 123344444445444 47999999999
Q ss_pred EEEeccccccEEEccC---CC--EEecCEEEEcCCCCCCcCCCCCCCC--cEEEecCHHHHHhhcccC--CCCCcEEEEC
Q psy2951 671 IISDSELNEKKIKLQD---GT--SIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHI--TPESNVVVIG 741 (1466)
Q Consensus 671 v~~i~~~~~~~v~~~~---~~--~~~~d~lviAtG~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~--~~~~~vvVvG 741 (1466)
|+.+ +...+.+.+.+ +. ++.||+||||||++|+.|++| |.+ .++..++..++..+.+.+ ..+++|+|||
T Consensus 81 V~~i-d~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ip-G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViG 158 (565)
T 3ntd_A 81 VVAI-DRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIP-GVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVG 158 (565)
T ss_dssp EEEE-ETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCT-TCCSTTEECCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EEEE-ECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCCCC-CCCCCCEEEeCCHHHHHHHHHHHhhCCCCEEEEEC
Confidence 9999 88887777653 43 799999999999999999999 875 778888888776665322 3578999999
Q ss_pred CChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEec----------------
Q psy2951 742 SSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKN---------------- 805 (1466)
Q Consensus 742 ~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~---------------- 805 (1466)
+|++|+|+|..|++.|.+|+++++.+.++. .+++++.+.+.+.+++.||++++++.+++++..
T Consensus 159 gG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~ 237 (565)
T 3ntd_A 159 GGFIGLEMMESLHHLGIKTTLLELADQVMT-PVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAH 237 (565)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEESSSSSCT-TSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTT
T ss_pred CCHHHHHHHHHHHhcCCcEEEEEcCCccch-hcCHHHHHHHHHHHHHCCCEEEeCCeEEEEecccccccccccccccccc
Confidence 999999999999999999999999998774 789999999999999999999999999999852
Q ss_pred --CCCceEEEECCCCcEEecCEEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCce
Q psy2951 806 --EKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKN 883 (1466)
Q Consensus 806 --~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~ 883 (1466)
.++. ..+.+.+|+++++|.||+|+|++|++++++.+|++++++|+|.||++++|+.|+|||+|||+..+... +|.+
T Consensus 238 ~~~~~~-~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~-~g~~ 315 (565)
T 3ntd_A 238 QHIKGH-LSLTLSNGELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFV-TGQA 315 (565)
T ss_dssp CCTTCE-EEEEETTSCEEEESEEEECSCEEECCHHHHHHTCCBCTTSSBCCCTTCBCSSTTEEECGGGBCEEBTT-TCCE
T ss_pred ccCCCc-EEEEEcCCCEEEcCEEEECcCCccchHHHHhCCcccCCCCCEEECCCcccCCCCEEEeeeeEeecccc-CCce
Confidence 2333 35667888899999999999999999988888999999999999999999999999999999877654 4556
Q ss_pred eeeccHHHHHHHHHHHHHHhccCCCcCcccCe-eeeeecCceeEEeeccCC------CC--ceeEec------c-cccce
Q psy2951 884 ASIGHYQLAQYHGRIAALNMVEKKTSLSTIPF-FWTMLFGVGFRFAGYAAG------HT--QVDIVG------D-LEALK 947 (1466)
Q Consensus 884 ~~~~~~~~A~~~g~~aA~~i~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~------~~--~~~~~~------~-~~~~~ 947 (1466)
..+++++.|..||+.||+||+++...++..+. .++.+|+..+..+|+++. .+ ...... . -++..
T Consensus 316 ~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 395 (565)
T 3ntd_A 316 CLVPLAGPANRQGRMAADNMFGREERYQGTQGTAICKVFDLAVGATGKNEKQLKQAGIAFEKVYVHTASHASYYPGAEVV 395 (565)
T ss_dssp ECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTSTTCCEE
T ss_pred eecccHHHHHHHHHHHHHHhcCCCccCCCcccceEEEEcCcEEEEecCCHHHHHHcCCCeEEEEEecCcccCcCCCCceE
Confidence 66788999999999999999998777766543 445688888889998752 11 111110 0 12456
Q ss_pred EEEEEe--cCCeEEEEEeecCch
Q psy2951 948 FTAYYS--NADKVLAILTVGMDP 968 (1466)
Q Consensus 948 ~~~~~~--~~~~i~g~~~~g~~~ 968 (1466)
|+|+++ ++++++|++++|...
T Consensus 396 ~~k~v~~~~~~~ilG~~~~g~~a 418 (565)
T 3ntd_A 396 SFKLLFDPVKGTIFGAQAVGKDG 418 (565)
T ss_dssp EEEEEECTTTCBEEEEEEEESSS
T ss_pred EEEEEEECCCCEEEEEEEECCcc
Confidence 899998 579999999999985
No 35
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=2.8e-37 Score=379.78 Aligned_cols=366 Identities=21% Similarity=0.330 Sum_probs=292.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc---cCcccccccCHhHhh-hCCcEEEEceE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKADSILLRTEEFYK-DNDIHVIKGKK 670 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~gv~~~~~~~ 670 (1466)
++||+|||||+||++||..|++.+...+|+++|+++..+|..+.+..... .+.+++..+..+.+. ..+++++.+++
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~ 115 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHE 115 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCE
Confidence 57999999999999999999998444559999999877776654443322 234556666667674 45999999988
Q ss_pred EEEeccccccEEEccC---CC--EEecCEEEEcCCCCCCcCCCCCCCC--cEEEecCHHHHHhhcccCC--CCCcEEEEC
Q psy2951 671 IISDSELNEKKIKLQD---GT--SIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHIT--PESNVVVIG 741 (1466)
Q Consensus 671 v~~i~~~~~~~v~~~~---~~--~~~~d~lviAtG~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~--~~~~vvVvG 741 (1466)
|..+ +...+.+.+.+ ++ ++.||+||||||++|+.|+++ |.+ +++++.+.+++..+.+.+. .+++|+|||
T Consensus 116 v~~i-~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~-G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViG 193 (480)
T 3cgb_A 116 VTKV-DTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWE-GRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIG 193 (480)
T ss_dssp EEEE-ETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCB-TTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEEC
T ss_pred EEEE-ECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCCCCC-CccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEEC
Confidence 9988 77777776643 65 799999999999999999998 875 6788888888877665443 589999999
Q ss_pred CChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEE
Q psy2951 742 SSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTI 821 (1466)
Q Consensus 742 ~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i 821 (1466)
+|++|+|+|..|++.|.+|+++++.+.++ +.+++++.+.+.+.+++.||++++++++++++.+ +++..+.++ +.++
T Consensus 194 gG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~~-~~~i 269 (480)
T 3cgb_A 194 GGAIGLEMAETFVELGKKVRMIERNDHIG-TIYDGDMAEYIYKEADKHHIEILTNENVKAFKGN--ERVEAVETD-KGTY 269 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCGGGTT-SSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SBEEEEEET-TEEE
T ss_pred CCHHHHHHHHHHHhcCCeEEEEEeCCchh-hcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEEC-CCEE
Confidence 99999999999999999999999998766 4688999999999999999999999999999843 345455554 4589
Q ss_pred ecCEEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHH
Q psy2951 822 PADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAAL 901 (1466)
Q Consensus 822 ~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~ 901 (1466)
++|.||+|+|++|++++++..|++++++|+|.||+++||+.|+|||+|||+..+... .+.+..++++..|..||+.+|.
T Consensus 270 ~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~~~~ts~p~IyA~GD~~~~~~~~-~g~~~~~~~~~~A~~qg~~aa~ 348 (480)
T 3cgb_A 270 KADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYMQTNVQDVYAAGDCATHYHVI-KEIHDHIPIGTTANKQGRLAGL 348 (480)
T ss_dssp ECSEEEECSCEEESCGGGTTSCCCBCTTSCBCCCTTSBCSSTTEEECGGGBCEEBTT-TCSEECCCCHHHHHHHHHHHHH
T ss_pred EcCEEEECcCCCcChHHHHhCCcccCCCCCEEECCCccCCCCCEEEeeeEEEecCCC-CCcceecchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999876543 3455566789999999999999
Q ss_pred HhccCCCcCcc-cCeeeeeecCceeEEeeccCC------CC--ceeEecc-------cccceEEEEEe--cCCeEEEEEe
Q psy2951 902 NMVEKKTSLST-IPFFWTMLFGVGFRFAGYAAG------HT--QVDIVGD-------LEALKFTAYYS--NADKVLAILT 963 (1466)
Q Consensus 902 ~i~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~------~~--~~~~~~~-------~~~~~~~~~~~--~~~~i~g~~~ 963 (1466)
||++....+.. .+.+|+.+++..+..+|+++. .+ ....... .+...|.|+++ ++++++|+++
T Consensus 349 ~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~ 428 (480)
T 3cgb_A 349 NMLDKRRAFKGTLGTGIIKFMNLTLARTGLNEKEAKGLHIPYKTVKVDSTNMAGYYPNAKPLYLKLLYRSDTKQLLGGQV 428 (480)
T ss_dssp HHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCEEEEEEEEETTTCBEEEEEE
T ss_pred HhcCCCccCCCccceeEEEECCcEEEEeCCCHHHHHHcCCceEEEEEecCCcccccCCCceEEEEEEEECCCCEEEEEEE
Confidence 99987655543 345677788888889997642 11 1111110 12345888888 4799999999
Q ss_pred ecCc
Q psy2951 964 VGMD 967 (1466)
Q Consensus 964 ~g~~ 967 (1466)
+|..
T Consensus 429 vg~~ 432 (480)
T 3cgb_A 429 IGEE 432 (480)
T ss_dssp EESS
T ss_pred ECCc
Confidence 9987
No 36
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=4.9e-37 Score=375.00 Aligned_cols=365 Identities=22% Similarity=0.326 Sum_probs=291.8
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc---cCcccccccCHhHhhhCCcEEEEceEEE
Q psy2951 596 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKADSILLRTEEFYKDNDIHVIKGKKII 672 (1466)
Q Consensus 596 ~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 672 (1466)
+||+|||||+||++||..|++++...+|+++|+++..+|..+.+..... ...+++..+..+++++.|++++.++.+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 80 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEIT 80 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 4899999999999999999998444459999998877665544332221 2345566667788888999999999998
Q ss_pred EeccccccEEEccC---CC--EEecCEEEEcCCCCCCcCCCCCCCC--cEEEecCHHHHHhhcccCC--CCCcEEEECCC
Q psy2951 673 SDSELNEKKIKLQD---GT--SIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHIT--PESNVVVIGSS 743 (1466)
Q Consensus 673 ~i~~~~~~~v~~~~---~~--~~~~d~lviAtG~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~--~~~~vvVvG~G 743 (1466)
.+ +...+.+.+.+ |+ ++.||+||||||++|+.|++| |.+ ++++.++.+++..+.+.+. .+++++|||+|
T Consensus 81 ~i-~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~-G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G 158 (447)
T 1nhp_A 81 AI-QPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIP-GKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSG 158 (447)
T ss_dssp EE-ETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCST-TTTSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCS
T ss_pred EE-eCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCCCC-CCCCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCC
Confidence 88 77777777653 54 489999999999999999998 875 6777778888777665554 68999999999
Q ss_pred hHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEec
Q psy2951 744 FIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPA 823 (1466)
Q Consensus 744 ~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~ 823 (1466)
++|+|+|..|++.|.+|+++++.+.++...+++++.+.+.+.+++.||++++++++++++.. +++..+.+ +++++++
T Consensus 159 ~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~-~~~~i~~ 235 (447)
T 1nhp_A 159 YIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGD--GRVQKVVT-DKNAYDA 235 (447)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECS--SBCCEEEE-SSCEEEC
T ss_pred HHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEE-CCCEEEC
Confidence 99999999999999999999999887755689999999999999999999999999999843 33434455 4578999
Q ss_pred CEEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHh
Q psy2951 824 DLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNM 903 (1466)
Q Consensus 824 D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i 903 (1466)
|.||+|+|++|++++++.. ++++++|+|.||++++|+.|+|||+|||+..+... .+.+..+++++.|..||+.+|.||
T Consensus 236 d~vi~a~G~~p~~~~~~~~-~~~~~~G~i~Vd~~~~t~~~~Iya~GD~~~~~~~~-~g~~~~~~~~~~A~~qg~~aa~~i 313 (447)
T 1nhp_A 236 DLVVVAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNP-ADTEVNIALATNARKQGRFAVKNL 313 (447)
T ss_dssp SEEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCBCSSTTEEECGGGSCEEEGG-GTEEECCCCHHHHHHHHHHHHHTS
T ss_pred CEEEECcCCCCChHHHHhh-hhhcCCCcEEECccccCCCCCEEEeeeEEEeeccC-CCCceechhHHHHHHHHHHHHHhh
Confidence 9999999999999988887 88888899999999999999999999999865543 344455678999999999999999
Q ss_pred ccCCCcCc-ccCeeeeeecCceeEEeeccCCC------C--ceeEec--c-----cccceEEEEEec--CCeEEEEEeec
Q psy2951 904 VEKKTSLS-TIPFFWTMLFGVGFRFAGYAAGH------T--QVDIVG--D-----LEALKFTAYYSN--ADKVLAILTVG 965 (1466)
Q Consensus 904 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~------~--~~~~~~--~-----~~~~~~~~~~~~--~~~i~g~~~~g 965 (1466)
++....+. ..+++|+.+++..+..+|+.+.. + ...... . .+...|.|++++ +++++|++++|
T Consensus 314 ~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g 393 (447)
T 1nhp_A 314 EEPVKPFPGVQGSSGLAVFDYKFASTGINEVMAQKLGKETKAVTVVEDYLMDFNPDKQKAWFKLVYDPETTQILGAQLMS 393 (447)
T ss_dssp SSCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHHTCCCEEEEEEEESSCTTCTTCCEEEEEEEECTTTCBEEEEEEEE
T ss_pred cCCCCCCCCccccEEEEECCeeeEEecCCHHHHHHcCCceEEEEEEcCCccccCCCCceEEEEEEEECCCCEEEEEEEEc
Confidence 98664443 34667888888888889876421 1 100101 0 123468888884 68999999999
Q ss_pred Cc
Q psy2951 966 MD 967 (1466)
Q Consensus 966 ~~ 967 (1466)
..
T Consensus 394 ~~ 395 (447)
T 1nhp_A 394 KA 395 (447)
T ss_dssp SS
T ss_pred Cc
Confidence 87
No 37
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=4.1e-37 Score=367.99 Aligned_cols=357 Identities=18% Similarity=0.263 Sum_probs=285.6
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc--cCcccccccC-HhHhhhCCcEEEEceEE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD--IKADSILLRT-EEFYKDNDIHVIKGKKI 671 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~gv~~~~~~~v 671 (1466)
++||+|||||+||++||..|+++|+++.|++++++....|..+.++..+. ....++.... ..++++.+++++.+++|
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v 83 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTRV 83 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECSCCC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeCCEE
Confidence 58999999999999999999999988889999998655555444443332 2333444433 45567889999998888
Q ss_pred EEeccccccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCC--cEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHH
Q psy2951 672 ISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEA 749 (1466)
Q Consensus 672 ~~i~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~ 749 (1466)
..+ +...+++.+.+ .++.||+||||||++|..|+++ |.+ .+++.+++.++..+...+..+++++|||+|++|+|+
T Consensus 84 ~~i-~~~~~~v~~~~-~~~~~d~lviAtG~~p~~p~i~-g~~~~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~ 160 (384)
T 2v3a_A 84 TGI-DPGHQRIWIGE-EEVRYRDLVLAWGAEPIRVPVE-GDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEF 160 (384)
T ss_dssp CEE-EGGGTEEEETT-EEEECSEEEECCCEEECCCCCB-STTTTCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHH
T ss_pred EEE-ECCCCEEEECC-cEEECCEEEEeCCCCcCCCCCC-CcCcCCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHH
Confidence 888 77778888754 5799999999999999999998 765 688899999888776666679999999999999999
Q ss_pred HHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEc
Q psy2951 750 AAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVG 829 (1466)
Q Consensus 750 A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a 829 (1466)
|..|++.|.+|+++++.+.++...+++++.+.+.+.+++.||++++++++++++..++ ...+.+++|+++++|.||+|
T Consensus 161 A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~--~~~v~~~~g~~i~~d~vv~a 238 (384)
T 2v3a_A 161 ANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGE--GLEAHLSDGEVIPCDLVVSA 238 (384)
T ss_dssp HHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETT--EEEEEETTSCEEEESEEEEC
T ss_pred HHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCC--EEEEEECCCCEEECCEEEEC
Confidence 9999999999999999988776556899999999999999999999999999984322 34677888999999999999
Q ss_pred cccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCCCc
Q psy2951 830 IGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS 909 (1466)
Q Consensus 830 ~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~~~ 909 (1466)
+|++|++++++.+|++++ +| |.||+++||+.|+|||+|||+..+... .+++..|..||+.+|+||+|...+
T Consensus 239 ~G~~p~~~l~~~~g~~~~-~g-i~vd~~~~t~~~~IyA~GD~~~~~~~~-------~~~~~~a~~~g~~~a~~i~g~~~~ 309 (384)
T 2v3a_A 239 VGLRPRTELAFAAGLAVN-RG-IVVDRSLRTSHANIYALGDCAEVDGLN-------LLYVMPLMACARALAQTLAGNPSQ 309 (384)
T ss_dssp SCEEECCHHHHHTTCCBS-SS-EEECTTCBCSSTTEEECGGGEEETTBC-------CCSHHHHHHHHHHHHHHHTTCCCC
T ss_pred cCCCcCHHHHHHCCCCCC-CC-EEECCCCCCCCCCEEEeeeeeeECCCC-------cchHHHHHHHHHHHHHHhcCCCcc
Confidence 999999988898999887 57 999999999999999999999754321 246778999999999999987654
Q ss_pred C--cccCeeeeeecCceeEEeeccCCC-CceeEecccccceEEEEEe-cCCeEEEEEeecCch
Q psy2951 910 L--STIPFFWTMLFGVGFRFAGYAAGH-TQVDIVGDLEALKFTAYYS-NADKVLAILTVGMDP 968 (1466)
Q Consensus 910 ~--~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~i~g~~~~g~~~ 968 (1466)
+ ..+|+++. ..+.++...|..... .+....+ ++.+|.+++. ++++++|++++|...
T Consensus 310 ~~~~~~p~~~~-~~~~~~~~~g~~~~~~~~~~~~~--~~~g~~~~~~~~~~~i~G~~~~g~~a 369 (384)
T 2v3a_A 310 VAYGPMPVTVK-TPACPLVVSPPPRGMDGQWLVEG--SGTDLKVLCRDTAGRVIGYALTGAAV 369 (384)
T ss_dssp CCCCCCCEEEC-CTTSCEEEECCCTTCCCEEEEEE--ETTEEEEEEECTTSCEEEEEEEGGGG
T ss_pred CCCCCcceEEE-ECCeeEEEecCCCCCCceEEEEe--cCCcEEEEEEccCCEEEEEEEECcch
Confidence 4 45665321 134567777765432 2233333 3446888877 489999999999874
No 38
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=7.5e-37 Score=386.86 Aligned_cols=369 Identities=20% Similarity=0.305 Sum_probs=297.6
Q ss_pred CCCCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc---cCccc-ccccCHhHhhhCCcEEE
Q psy2951 591 SSGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKADS-ILLRTEEFYKDNDIHVI 666 (1466)
Q Consensus 591 ~~~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~gv~~~ 666 (1466)
+...+++|+|||||+|||+||..|++++...+|+++|+++.++|..+.+...+. ..... +..+...+.++.+++++
T Consensus 32 ~~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~ 111 (588)
T 3ics_A 32 DRWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIR 111 (588)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEE
T ss_pred CcccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEE
Confidence 445578999999999999999999999555569999999988887766554443 12333 33444455568899999
Q ss_pred EceEEEEeccccccEEEcc---CCC--EEecCEEEEcCCCCCCcCCCCCCC-C--cEEEecCHHHHHhhcccC--CCCCc
Q psy2951 667 KGKKIISDSELNEKKIKLQ---DGT--SIDFTKIYLATGSSPRTISQADGV-N--KVFYLRTVEDANNIAPHI--TPESN 736 (1466)
Q Consensus 667 ~~~~v~~i~~~~~~~v~~~---~~~--~~~~d~lviAtG~~~~~~~~~~g~-~--~~~~~~~~~~~~~~~~~~--~~~~~ 736 (1466)
++++|+.+ +...+.+.+. ++. ++.||+||||||++|+.|+++ |. + .++..++..++..+...+ ..+++
T Consensus 112 ~~~~V~~i-d~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~-G~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~ 189 (588)
T 3ics_A 112 VLSEVVKI-NKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIP-GIEEAKALFTLRNVPDTDRIKAYIDEKKPRH 189 (588)
T ss_dssp CSEEEEEE-ETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCT-TTTTCTTEEECSSHHHHHHHHHHHHHHCCSE
T ss_pred ECCEEEEE-ECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCCCCC-CcccCCCeEEeCCHHHHHHHHHHHhhcCCCe
Confidence 99999999 8877777764 455 789999999999999999999 87 3 788888888887665433 24899
Q ss_pred EEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECC
Q psy2951 737 VVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLD 816 (1466)
Q Consensus 737 vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~ 816 (1466)
++|||+|++|+|+|..|++.|.+|+++++.+.++. .+++++.+.+.+.+++.||++++++++++++...+ .+.+.
T Consensus 190 vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~----~v~~~ 264 (588)
T 3ics_A 190 ATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP-PIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGA----VVRLK 264 (588)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-TSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT----EEEET
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc-cCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCC----EEEEC
Confidence 99999999999999999999999999999987774 58999999999999999999999999999984322 46778
Q ss_pred CCcEEecCEEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHH
Q psy2951 817 NGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHG 896 (1466)
Q Consensus 817 ~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g 896 (1466)
+|+++++|.||+|+|++|++++++.+|++++++|+|.||++++|+.|+|||+|||+..+... +|.+..+++++.|..||
T Consensus 265 ~g~~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~-~g~~~~~~~~~~A~~~g 343 (588)
T 3ics_A 265 SGSVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQTSDPHIYAIGDAIEVKDFV-TETETMIPLAWPANRQG 343 (588)
T ss_dssp TSCEEECSEEEECSCEEECCHHHHHTTCCBCGGGCBCCCTTSBCSSTTEEECGGGBCEEBTT-TCCEECCCCHHHHHHHH
T ss_pred CCCEEEcCEEEEccCCCCChHHHHhcCceEcCCCCEEECCccccCCCCEEEeeeeeeccccc-CCcccccccHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999876654 45566678899999999
Q ss_pred HHHHHHhcc-CCCcCc-ccCeeeeeecCceeEEeeccCC------CC--ceeEe--c-----ccccceEEEEEe--cCCe
Q psy2951 897 RIAALNMVE-KKTSLS-TIPFFWTMLFGVGFRFAGYAAG------HT--QVDIV--G-----DLEALKFTAYYS--NADK 957 (1466)
Q Consensus 897 ~~aA~~i~~-~~~~~~-~~~~~~~~~~~~~~~~~g~~~~------~~--~~~~~--~-----~~~~~~~~~~~~--~~~~ 957 (1466)
+++|+||++ ....+. .+|..+..+|+..+..+|+++. .+ ..... . .-++..|+|+++ ++++
T Consensus 344 ~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~ 423 (588)
T 3ics_A 344 RMLADIIHGHTDSLYKGTLGTSVAKVFDLTVATTGLNEKILKRLNIPYEVVHVQANSHAGYYPNATPVLIKLIFNKDSGK 423 (588)
T ss_dssp HHHHHHHTTCCSSCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTSTTCCEEEEEEEECTTTCB
T ss_pred HHHHHHhcCCCccccCCcccceEEEECCeEEEEecCCHHHHHHcCCCeEEEEEecCCccccCCCCceEEEEEEEECCCCe
Confidence 999999998 655554 3454555578888888998752 11 11110 0 012456899998 5799
Q ss_pred EEEEEeecCc
Q psy2951 958 VLAILTVGMD 967 (1466)
Q Consensus 958 i~g~~~~g~~ 967 (1466)
++|++++|.+
T Consensus 424 ilG~~~~g~~ 433 (588)
T 3ics_A 424 IYGAQTLGRD 433 (588)
T ss_dssp EEEEEEEESS
T ss_pred EEEEEEEcCC
Confidence 9999999975
No 39
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=7.3e-37 Score=376.61 Aligned_cols=387 Identities=19% Similarity=0.212 Sum_probs=278.9
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCC---C-Cccch----------------hccc-------Cc
Q psy2951 43 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD---R-VKLSK----------------QLDI-------KA 95 (1466)
Q Consensus 43 ~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~---~-~~~~~----------------~~~~-------~~ 95 (1466)
++||+|||||+||++||..|++.|.++.|++..+ ..... . +..++ .... ..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~--~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~ 83 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYK--TLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDI 83 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS--CSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC--CCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCH
Confidence 4799999999999999999999999887765422 21100 0 00000 0000 00
Q ss_pred cccc-----------ccChhhhhcCCeEEEeCceEEEeccccccEEEecCC------------cEEecCEEEEccCCCCC
Q psy2951 96 DSIL-----------LRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDG------------TSIDFTKIYLATGSSPR 152 (1466)
Q Consensus 96 ~~~~-----------~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~~------------~~~~~d~lviAtG~~~~ 152 (1466)
..+. ..+..++++.+++++.++.+.. +....++...++ .++.||+||+|||++|.
T Consensus 84 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~--~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~ 161 (482)
T 1ojt_A 84 DMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFL--DPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVT 161 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEE--ETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEc--cCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCC
Confidence 1111 1123456678999999987653 223333433344 57999999999999988
Q ss_pred CCCCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHH
Q psy2951 153 TISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITK 232 (1466)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~ 232 (1466)
.++.++....+ .+..+...+.. .+++++|||||++|+|+|..|++.|.+||++++.+.+++ .+++++.+.+.+
T Consensus 162 ~~~~i~~~~~v---~~~~~~~~~~~---~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~-~~~~~~~~~l~~ 234 (482)
T 1ojt_A 162 KLPFIPEDPRI---IDSSGALALKE---VPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ-GADRDLVKVWQK 234 (482)
T ss_dssp CCSSCCCCTTE---ECHHHHTTCCC---CCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST-TSCHHHHHHHHH
T ss_pred CCCCCCccCcE---EcHHHHhcccc---cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc-ccCHHHHHHHHH
Confidence 76644432222 35666655442 368999999999999999999999999999999988774 688999999999
Q ss_pred HHHhCCcEEEcCceEEEEEecCCCCeEEEEcCC----CcEEeccEEEEeeccccCccc--cccCCceecCCccEEECCCC
Q psy2951 233 LFESKGVKFVMKANVSSFEKNEKNDVTAANLDN----GTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYL 306 (1466)
Q Consensus 233 ~l~~~GV~i~~~~~v~~i~~~~~~~~~~v~~~~----g~~i~~D~Vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~ 306 (1466)
.++++||+++++++|++++.+++ ...+.+.+ |+++++|.||+|+|++||+++ ++..|++++++|+|.||+++
T Consensus 235 ~l~~~gV~i~~~~~v~~i~~~~~--~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~ 312 (482)
T 1ojt_A 235 QNEYRFDNIMVNTKTVAVEPKED--GVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQM 312 (482)
T ss_dssp HHGGGEEEEECSCEEEEEEEETT--EEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCTTS
T ss_pred HHHhcCCEEEECCEEEEEEEcCC--eEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCCCc
Confidence 99999999999999999986532 23455555 678999999999999999987 68889999888999999999
Q ss_pred CcCCCCEEEecccccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCCCC--CCCCCcccccccceeeEEEEeecCC--
Q psy2951 307 ETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS--LSTIPFFWTMLFGVGFRFAGYAAGH-- 382 (1466)
Q Consensus 307 ~t~~~~iya~GD~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~~~--~~~~p~~~s~~~~~~~~~~G~~~~~-- 382 (1466)
||+.|+|||+|||+..+ ..+..|..||+.+|.||++.... +..+|+. ...+..+..+|.+...
T Consensus 313 ~t~~~~IyA~GD~~~~~-----------~l~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~--~~~~~~~a~vG~te~~a~ 379 (482)
T 1ojt_A 313 RTNVPHIYAIGDIVGQP-----------MLAHKAVHEGHVAAENCAGHKAYFDARVIPGV--AYTSPEVAWVGETELSAK 379 (482)
T ss_dssp BCSSTTEEECGGGTCSS-----------CCHHHHHHHHHHHHHHHTTCCCCCCCCCCCEE--ECSSSCEEEEECCHHHHH
T ss_pred ccCCCCEEEEEcccCCC-----------ccHHHHHHHHHHHHHHHcCCCccCCCCCCCEE--EEcCCCeEEEeCCHHHHH
Confidence 99999999999998753 34668999999999999986543 4455632 2222335555654311
Q ss_pred ---ceEEEec-----------ccCCCeEEEEEEc--CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc-----ccccCcc
Q psy2951 383 ---TQVDIVG-----------DLEALKFTAYYSN--ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS-----LPHSHRC 439 (1466)
Q Consensus 383 ---~~~~~~g-----------~~~~~~~~~~~~~--~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~-----~~~~~p~ 439 (1466)
.++.... .-+..+|.+++.+ +++|+|++++|. ++++..++ .+|+++.+. ++++|||
T Consensus 380 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~-~ai~~~~~~~~l~~~~~~~Pt 458 (482)
T 1ojt_A 380 ASARKITKANFPWAASGRAIANGCDKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVC-LAIEMGCDAADIGKTIHPHPT 458 (482)
T ss_dssp HHTCCEEEEEEEGGGCHHHHHTTCCSCEEEEEEETTTCBEEEEEEESTTHHHHHHHHH-HHHHTTCBHHHHHTSCCCSSS
T ss_pred hcCCCEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCCHHHHhcCccCCCC
Confidence 1111110 1135689999884 699999999998 35666666 999999886 7999999
Q ss_pred cchhh--cccCCCCccccC
Q psy2951 440 LGVVL--GKLDYHGTITIS 456 (1466)
Q Consensus 440 ~~e~~--~~~~~~~~~~~~ 456 (1466)
++|.+ ++....++..|.
T Consensus 459 ~~e~~~~a~~~~~~~~~~~ 477 (482)
T 1ojt_A 459 LGESIGMAAEVALGTCTDL 477 (482)
T ss_dssp STTHHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHHHHHhcccccc
Confidence 99998 433333444443
No 40
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=1e-36 Score=372.64 Aligned_cols=379 Identities=18% Similarity=0.245 Sum_probs=260.1
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCC------CCCCCC----CCccc-----------------hhcccCc
Q psy2951 43 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDE------NFLPYD----RVKLS-----------------KQLDIKA 95 (1466)
Q Consensus 43 ~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~------~~~~~~----~~~~~-----------------~~~~~~~ 95 (1466)
.|||+||||||||++||.+++++|.+|.|+|..+. ..+... -+-.+ ..+....
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 48999999999999999999999999988764331 111100 00000 0011110
Q ss_pred -------ccc-----------cccChhhhhcCCeEEEeCceEEEeccccccEEEec----CCcEEecCEEEEccCCCCCC
Q psy2951 96 -------DSI-----------LLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQ----DGTSIDFTKIYLATGSSPRT 153 (1466)
Q Consensus 96 -------~~~-----------~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~----~~~~~~~d~lviAtG~~~~~ 153 (1466)
..+ .......+++.+|+++.+...+... ....+... +.+++++|++|||||++|+.
T Consensus 122 ~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~--~~v~V~~~~~~~~~~~i~a~~iiIATGs~P~~ 199 (542)
T 4b1b_A 122 DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDK--NTVSYYLKGDLSKEETVTGKYILIATGCRPHI 199 (542)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEET--TEEEEEEC--CCCEEEEEEEEEEECCCEEECC
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCC--CcceEeecccCCceEEEeeeeEEeccCCCCCC
Confidence 111 1122344667899999998877643 22223222 33579999999999999987
Q ss_pred CCCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHH
Q psy2951 154 ISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKL 233 (1466)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~ 233 (1466)
||.++...... -+.+++..+.. .+++++|||||++|+|+|..++++|.+||++++. ..+ +.+++++.+.+.+.
T Consensus 200 P~~~~~~~~~~--~ts~~~l~l~~---lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~-~~L-~~~D~ei~~~l~~~ 272 (542)
T 4b1b_A 200 PDDVEGAKELS--ITSDDIFSLKK---DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRS-IVL-RGFDQQCAVKVKLY 272 (542)
T ss_dssp CSSSBTHHHHC--BCHHHHTTCSS---CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESS-CSS-TTSCHHHHHHHHHH
T ss_pred CCcccCCCccc--cCchhhhcccc---CCceEEEECCCHHHHHHHHHHHhcCCeEEEeccc-ccc-cccchhHHHHHHHH
Confidence 76555433211 25666666553 3579999999999999999999999999999875 344 67899999999999
Q ss_pred HHhCCcEEEcCceEEEEEecCCCCeEEEEcCCCcEEeccEEEEeeccccCcccc--ccCCceecCCcc-EEECCCCCcCC
Q psy2951 234 FESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYL--DGKGVELNGQKA-VVVNEYLETNV 310 (1466)
Q Consensus 234 l~~~GV~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~~~~l--~~~gl~~~~~g~-i~vd~~~~t~~ 310 (1466)
|++.||++++++.+++++..+ ....+.+.+++++.+|.|++|+|++||++.| +..++.++.+++ +.+|+++||+.
T Consensus 273 l~~~gi~~~~~~~v~~~~~~~--~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~Ts~ 350 (542)
T 4b1b_A 273 MEEQGVMFKNGILPKKLTKMD--DKILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNI 350 (542)
T ss_dssp HHHTTCEEEETCCEEEEEEET--TEEEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBCSS
T ss_pred HHhhcceeecceEEEEEEecC--CeEEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccccC
Confidence 999999999999999998764 2445777888899999999999999999864 667888887665 57899999999
Q ss_pred CCEEEecccccc-cCccCCCCcceeccHHHHHHHHHHHHHHhcCCCC---CCCCCC---cccccccceeeEE--------
Q psy2951 311 PGVYAGGDIAYA-PLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT---SLSTIP---FFWTMLFGVGFRF-------- 375 (1466)
Q Consensus 311 ~~iya~GD~~~~-~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~~---~~~~~p---~~~s~~~~~~~~~-------- 375 (1466)
|+|||+|||++. |+ ....|..||+++++|+++... ++..+| |+.|+...+|+..
T Consensus 351 p~IyAiGDv~~~~p~-----------La~~A~~eg~~aa~~i~g~~~~~~d~~~iP~~vft~PeiA~VGlTE~eA~~~g~ 419 (542)
T 4b1b_A 351 PSIFAVGDVAENVPE-----------LAPVAIKAGEILARRLFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYELYG 419 (542)
T ss_dssp TTEEECTTSBTTCCC-----------CHHHHHHHHHHHHHHHHSCCCCCCCCSSCCEEECSSSCEEEEECCHHHHHHHHC
T ss_pred CCeEEeccccCCchh-----------HHHHHHHHHHHHHHHHhcCCCcccCCCCCceEEeCCCCeEEEeCCHHHHHHhCC
Confidence 999999999854 33 345799999999999997543 466777 4566655555310
Q ss_pred ---EEeecCCce---EE--------------EecccCCCeEEEEEE-c--CCEEEEEEEECC--CHHHHHHHHHHhcCCC
Q psy2951 376 ---AGYAAGHTQ---VD--------------IVGDLEALKFTAYYS-N--ADKVLAILTVGM--DPLAAQFAEQVLEFPY 430 (1466)
Q Consensus 376 ---~G~~~~~~~---~~--------------~~g~~~~~~~~~~~~-~--~~~i~g~~~~~~--~~~~~~~~~~~i~~~~ 430 (1466)
++.....+. .. +.-..+..+|.+++. + +++|+|++++|. +++++.++ .+|+++.
T Consensus 420 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI~~~a-lAi~~~~ 498 (542)
T 4b1b_A 420 KSNVEVFLQEFNNLEISAVHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQGMA-LALRLKV 498 (542)
T ss_dssp TTTEEEEEC-----------------------------CCCEEEEEETTTTTBEEEEEEESTTHHHHHHHHH-HHHHTCC
T ss_pred CCcEEEEEeeccchhhhhhhhhhhhhcccccccccCCCceEEEEEEEeCCCCEEEEEEEECCCHHHHHHHHH-HHHHcCC
Confidence 000000000 00 000123568888875 3 489999999998 56777777 9999999
Q ss_pred cc-----ccccCcccchhh
Q psy2951 431 SS-----LPHSHRCLGVVL 444 (1466)
Q Consensus 431 ~~-----~~~~~p~~~e~~ 444 (1466)
+. ++|+|||++|.+
T Consensus 499 t~~dl~~~i~~HPTlsE~l 517 (542)
T 4b1b_A 499 KKKDFDNCIGIHPTDAESF 517 (542)
T ss_dssp BHHHHHHC-----------
T ss_pred CHHHHhccCCcCCCHHHHH
Confidence 86 899999999998
No 41
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=7.6e-36 Score=365.29 Aligned_cols=383 Identities=22% Similarity=0.264 Sum_probs=278.7
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCC---CC-ccchh----------------cc------cCcc
Q psy2951 43 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD---RV-KLSKQ----------------LD------IKAD 96 (1466)
Q Consensus 43 ~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~---~~-~~~~~----------------~~------~~~~ 96 (1466)
++||+||||||||++||..|++.|+++.|++.+ . .... .. ..++. +. .+..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~--~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAG--E-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--C-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCC--C-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHH
Confidence 589999999999999999999999987776543 2 1100 00 00000 00 0111
Q ss_pred cccc-----------cChhhhhcCCeEEEeCceEEEeccccccEEEecCCcEEecCEEEEccCCCCCCCCCCCCCCcEEE
Q psy2951 97 SILL-----------RTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFY 165 (1466)
Q Consensus 97 ~~~~-----------~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~~~~~~~~ 165 (1466)
.+.. .+..++++.+++++.++.+..+ .+++.+. ++++.||+||+|||++|+.++.+++...++
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~----~~~v~v~-g~~~~~d~lViATGs~p~~p~gi~~~~~v~- 156 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVG----PKEVEVG-GERYGAKSLILATGSEPLELKGFPFGEDVW- 156 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEE----TTEEEET-TEEEEEEEEEECCCEEECCBTTBCCSSSEE-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcc----CCEEEEc-cEEEEeCEEEEcCCCCCCCCCCCCCCCcEE-
Confidence 1111 1234566789999999876532 3567776 678999999999999998766455433332
Q ss_pred ecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHHhCCcEEEcCc
Q psy2951 166 LRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKA 245 (1466)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~ 245 (1466)
+..+...+... .+++++|||+|++|+|+|..|++.|.+|+++++.+.+++ .+++++.+.+.+.+++.||++++++
T Consensus 157 --~~~~~~~l~~~--~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gV~i~~~~ 231 (464)
T 2eq6_A 157 --DSTRALKVEEG--LPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP-QGDPETAALLRRALEKEGIRVRTKT 231 (464)
T ss_dssp --CHHHHTCGGGC--CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHTTCEEECSE
T ss_pred --cHHHHHhhhhh--cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHhcCCEEEcCC
Confidence 56666655432 357999999999999999999999999999999887664 6789999999999999999999999
Q ss_pred eEEEEEecCCCCeEEEEcC-C--Cc--EEeccEEEEeeccccCccc--cccCCceecCCccEEECCCCCcCCCCEEEecc
Q psy2951 246 NVSSFEKNEKNDVTAANLD-N--GT--TIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 318 (1466)
Q Consensus 246 ~v~~i~~~~~~~~~~v~~~-~--g~--~i~~D~Vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~t~~~~iya~GD 318 (1466)
+|++++.++ +. ..+.+. + |+ ++++|.||+|+|++|++++ ++..|++++++|+|.||+++||+.|+|||+||
T Consensus 232 ~v~~i~~~~-~~-~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD 309 (464)
T 2eq6_A 232 KAVGYEKKK-DG-LHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGD 309 (464)
T ss_dssp EEEEEEEET-TE-EEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBCSSTTEEECGG
T ss_pred EEEEEEEeC-CE-EEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCcccCCCCEEEEec
Confidence 999998653 22 335544 5 66 8999999999999999986 47778888888999999999999999999999
Q ss_pred cccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCCC--CCCCCCcccccccceeeEEEEeecCC-----ceEEEe---
Q psy2951 319 IAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT--SLSTIPFFWTMLFGVGFRFAGYAAGH-----TQVDIV--- 388 (1466)
Q Consensus 319 ~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~~--~~~~~p~~~s~~~~~~~~~~G~~~~~-----~~~~~~--- 388 (1466)
|+..+ ..+..|..||+.+|.||++... .+. +|+. ...+..+..+|..... .++...
T Consensus 310 ~~~~~-----------~l~~~A~~~g~~aa~~i~g~~~~~~~~-~p~~--~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~ 375 (464)
T 2eq6_A 310 AARPP-----------LLAHKAMREGLIAAENAAGKDSAFDYQ-VPSV--VYTSPEWAGVGLTEEEAKRAGYKVKVGKFP 375 (464)
T ss_dssp GTCSS-----------CCHHHHHHHHHHHHHHHTTCCCCCCCC-CCEE--ECSSSEEEEEECCHHHHHHTTCCEEEEEEE
T ss_pred cCCCc-----------ccHHHHHHHHHHHHHHhcCCCcccCCC-CCeE--EECCCCEEEEeCCHHHHHhcCCCEEEEEEE
Confidence 98754 3456899999999999998654 344 5642 2223345566654321 111110
Q ss_pred --------cccCCCeEEEEEEc--CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc-----ccccCcccchhh--cccCC
Q psy2951 389 --------GDLEALKFTAYYSN--ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS-----LPHSHRCLGVVL--GKLDY 449 (1466)
Q Consensus 389 --------g~~~~~~~~~~~~~--~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~-----~~~~~p~~~e~~--~~~~~ 449 (1466)
-.-+..+|.+++.+ +++|+|++++|. ++++..++ .+|+.+.+. +++.|||++|.+ ++...
T Consensus 376 ~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~-~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~ 454 (464)
T 2eq6_A 376 LAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAA-LALEMGATLTDLALTVHPHPTLSESLMEAAEAF 454 (464)
T ss_dssp GGGCHHHHHTSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHH-HHHHTTCBHHHHHHSCCCSSCTTHHHHHHHHHH
T ss_pred cCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCCHHHHhcCcCCCCChHHHHHHHHHHH
Confidence 01135689998887 589999999998 24556666 899999876 799999999998 33333
Q ss_pred CCccccC
Q psy2951 450 HGTITIS 456 (1466)
Q Consensus 450 ~~~~~~~ 456 (1466)
.++.+|.
T Consensus 455 ~~~~~~~ 461 (464)
T 2eq6_A 455 HKQAIHI 461 (464)
T ss_dssp TTCCSSS
T ss_pred hcCcccc
Confidence 3444443
No 42
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.1e-36 Score=366.60 Aligned_cols=380 Identities=17% Similarity=0.236 Sum_probs=276.4
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCC-------CCC----------------CCCccc------h-hc
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENF-------LPY----------------DRVKLS------K-QL 91 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~-------~~~----------------~~~~~~------~-~~ 91 (1466)
.++||+|||||+||++||..|++.|.++.|++.+.-.. .|. ....+. . ..
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 89 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHL 89 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGGC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCCcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccccccC
Confidence 35899999999999999999999999988876432100 000 000000 0 00
Q ss_pred ccCccc-----------ccccChhhhhcCCeEEEeCceEEEeccccccEEEecCCc--EEecCEEEEccCCCCCCCCCCC
Q psy2951 92 DIKADS-----------ILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGT--SIDFTKIYLATGSSPRTISQAD 158 (1466)
Q Consensus 92 ~~~~~~-----------~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~~~--~~~~d~lviAtG~~~~~~~~~~ 158 (1466)
..+... +...+...+++.+++++.++... .+....++.+.++. ++.||+||+|||++|..++.++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~--i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~~i~ 167 (479)
T 2hqm_A 90 TFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARF--NKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPENIP 167 (479)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE--CTTSCEEEEESSSCCEEEEEEEEEECCCEEECCCTTST
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE--eeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCCCC
Confidence 000000 11122344567899999987443 34445566666776 7999999999999988652455
Q ss_pred CCCcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHHhCC
Q psy2951 159 GVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKG 238 (1466)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~G 238 (1466)
+.+.+ .+.++...+. ..+++++|||+|++|+|+|..|++.|.+|+++++.+.++ +.+++++.+.+.+.+++.|
T Consensus 168 g~~~~---~~~~~~~~l~---~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-~~~d~~~~~~l~~~l~~~G 240 (479)
T 2hqm_A 168 GFELG---TDSDGFFRLE---EQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL-RKFDECIQNTITDHYVKEG 240 (479)
T ss_dssp TGGGS---BCHHHHHHCS---SCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC-TTSCHHHHHHHHHHHHHHT
T ss_pred Ccccc---cchHHHhccc---ccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc-cccCHHHHHHHHHHHHhCC
Confidence 55432 2445555543 246899999999999999999999999999999998776 4688999999999999999
Q ss_pred cEEEcCceEEEEEecCCCCeEEEEcCCC-cEEeccEEEEeeccccCccc-cccCCceecCCccEEECCCCCcCCCCEEEe
Q psy2951 239 VKFVMKANVSSFEKNEKNDVTAANLDNG-TTIPADLVIVGIGTVLNTNY-LDGKGVELNGQKAVVVNEYLETNVPGVYAG 316 (1466)
Q Consensus 239 V~i~~~~~v~~i~~~~~~~~~~v~~~~g-~~i~~D~Vi~a~G~~p~~~~-l~~~gl~~~~~g~i~vd~~~~t~~~~iya~ 316 (1466)
|+++++++|++++.++++....+.+++| +++++|.||+|+|++||+.+ ++..|++++++|+|.||++++|+.|+|||+
T Consensus 241 v~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~IyA~ 320 (479)
T 2hqm_A 241 INVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGIKLNSHDQIIADEYQNTNVPNIYSL 320 (479)
T ss_dssp CEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGGGTCCBCTTSCBCCCTTCBCSSTTEEEC
T ss_pred eEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhhcCceECCCCCEeECCCCccCCCCEEEE
Confidence 9999999999998754333456777888 78999999999999999977 788899999889999999999999999999
Q ss_pred cccccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCC------CCCCCCCcccccccceeeEEEEeecCC-------c
Q psy2951 317 GDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK------TSLSTIPFFWTMLFGVGFRFAGYAAGH-------T 383 (1466)
Q Consensus 317 GD~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~------~~~~~~p~~~s~~~~~~~~~~G~~~~~-------~ 383 (1466)
|||++.+ ..+..|..||+.+|.||++.. .++..+|+. -.....+..+|..... .
T Consensus 321 GD~~~~~-----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~--~~~~~~~~~vGl~e~~a~~~~~~~ 387 (479)
T 2hqm_A 321 GDVVGKV-----------ELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSV--IFSHPEAGSIGISEKEAIEKYGKE 387 (479)
T ss_dssp GGGTTSS-----------CCHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCEE--ECCSSCEEEEECCHHHHHHHHCGG
T ss_pred EecCCCc-----------ccHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCeE--EECCCCeEEEeCCHHHHHhcCCCC
Confidence 9997643 456789999999999999754 234455632 1112234455543211 1
Q ss_pred eEEEe-------c----ccCCCeEEEEEEc--CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc-----ccccCcccchh
Q psy2951 384 QVDIV-------G----DLEALKFTAYYSN--ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS-----LPHSHRCLGVV 443 (1466)
Q Consensus 384 ~~~~~-------g----~~~~~~~~~~~~~--~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~-----~~~~~p~~~e~ 443 (1466)
.+... + ..+..+|.+++.+ +++|+|++++|. +++++.++ .+|+++.+. ++++|||++|.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~-~ai~~~~t~~~l~~~~~~hPt~~e~ 466 (479)
T 2hqm_A 388 NIKVYNSKFTAMYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFG-VAIKMGATKADFDNCVAIHPTSAEE 466 (479)
T ss_dssp GEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHH-HHHHTTCBHHHHHTSCCCSSCSGGG
T ss_pred cEEEEEEeccHHHHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCCHHHHhhCcCCCCChHHH
Confidence 12111 1 1135689998886 489999999998 44566666 889999876 79999999998
Q ss_pred h
Q psy2951 444 L 444 (1466)
Q Consensus 444 ~ 444 (1466)
+
T Consensus 467 ~ 467 (479)
T 2hqm_A 467 L 467 (479)
T ss_dssp G
T ss_pred H
Confidence 8
No 43
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=5.2e-36 Score=369.33 Aligned_cols=380 Identities=19% Similarity=0.228 Sum_probs=276.6
Q ss_pred CCCCCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCC--------------------------CCCCCCccchhcc
Q psy2951 39 SSGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENF--------------------------LPYDRVKLSKQLD 92 (1466)
Q Consensus 39 ~~~~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~--------------------------~~~~~~~~~~~~~ 92 (1466)
+.+.++||+||||||||++||..|++.|+++.|++.+.-.. ..|..... ...
T Consensus 16 ~~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~--~~~ 93 (478)
T 3dk9_A 16 GAVASYDYLVIGGGSGGLASARRAAELGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSC--EGK 93 (478)
T ss_dssp -CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCC--CCC
T ss_pred ccCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCC--CCc
Confidence 33456899999999999999999999999988877321000 00000000 000
Q ss_pred cCc-----------ccccccChhhhhcCCeEEEeCceEEEeccccccEEEecCCcEEecCEEEEccCCCCCCCC--CCCC
Q psy2951 93 IKA-----------DSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTIS--QADG 159 (1466)
Q Consensus 93 ~~~-----------~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~--~~~~ 159 (1466)
... ..+...+...++..+++++.++.... +....++. .++.++.||+||||||++|..++ .+++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~--~~~~~~v~-~~g~~~~~d~lviAtG~~p~~p~~~~i~G 170 (478)
T 3dk9_A 94 FNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFT--SDPKPTIE-VSGKKYTAPHILIATGGMPSTPHESQIPG 170 (478)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEC--SCSSCEEE-ETTEEEECSCEEECCCEEECCCCTTTSTT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEe--eCCeEEEE-ECCEEEEeeEEEEccCCCCCCCCcCCCCC
Confidence 000 11112233455677999999986654 33445666 46678999999999999988652 4555
Q ss_pred CCcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHHhCCc
Q psy2951 160 VNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGV 239 (1466)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~GV 239 (1466)
.+. ..+.++...+. ..+++++|||+|++|+|+|..+++.|.+|+++++.+.++ +.+++++.+.+.+.+++.||
T Consensus 171 ~~~---~~~~~~~~~~~---~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-~~~d~~~~~~~~~~l~~~gv 243 (478)
T 3dk9_A 171 ASL---GITSDGFFQLE---ELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL-RSFDSMISTNCTEELENAGV 243 (478)
T ss_dssp GGG---SBCHHHHTTCC---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-TTSCHHHHHHHHHHHHHTTC
T ss_pred Cce---eEchHHhhchh---hcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc-cccCHHHHHHHHHHHHHCCC
Confidence 542 22444444433 236899999999999999999999999999999988776 67899999999999999999
Q ss_pred EEEcCceEEEEEecCCCCeEEEEcCC-------CcEEeccEEEEeeccccCcc-c-cccCCceecCCccEEECCCCCcCC
Q psy2951 240 KFVMKANVSSFEKNEKNDVTAANLDN-------GTTIPADLVIVGIGTVLNTN-Y-LDGKGVELNGQKAVVVNEYLETNV 310 (1466)
Q Consensus 240 ~i~~~~~v~~i~~~~~~~~~~v~~~~-------g~~i~~D~Vi~a~G~~p~~~-~-l~~~gl~~~~~g~i~vd~~~~t~~ 310 (1466)
++++++.|++++.++++....+.+.+ |+++++|.||+|+|++|+++ + ++..|++++++|+|.||++++|+.
T Consensus 244 ~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~ 323 (478)
T 3dk9_A 244 EVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNV 323 (478)
T ss_dssp EEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBCSS
T ss_pred EEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCcccCC
Confidence 99999999999875444223455544 26799999999999999998 4 678899999999999999999999
Q ss_pred CCEEEecccccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCC----CCCCCCCcccccccceeeEEEEeecCC----
Q psy2951 311 PGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK----TSLSTIPFFWTMLFGVGFRFAGYAAGH---- 382 (1466)
Q Consensus 311 ~~iya~GD~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~----~~~~~~p~~~s~~~~~~~~~~G~~~~~---- 382 (1466)
|+|||+|||++.+ ..+..|..||+.+|.||++.. ..+..+|+. ......+..+|.+...
T Consensus 324 ~~IyA~GD~~~~~-----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~--~~~~p~~a~vGlte~~a~~~ 390 (478)
T 3dk9_A 324 KGIYAVGDVCGKA-----------LLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTV--VFSHPPIGTVGLTEDEAIHK 390 (478)
T ss_dssp TTEEECGGGGCSS-----------CCHHHHHHHHHHHHHHHHSCCTTCCCCCTTCCEE--ECCSSCEEEEECCHHHHHHH
T ss_pred CCEEEEEecCCCC-----------ccHhHHHHHHHHHHHHHcCCCCcccCCCCCCCeE--EECCCceEEeeCCHHHHHhh
Confidence 9999999998654 346689999999999999762 345566632 1122334555554311
Q ss_pred ---ceE-----EEec------ccCCCeEEEEEEc--CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc-----ccccCcc
Q psy2951 383 ---TQV-----DIVG------DLEALKFTAYYSN--ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS-----LPHSHRC 439 (1466)
Q Consensus 383 ---~~~-----~~~g------~~~~~~~~~~~~~--~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~-----~~~~~p~ 439 (1466)
..+ .+.. .-+..+|.+++.+ +++|+|++++|. +++++.++ .+|+++.+. ++|+|||
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~-~ai~~~~t~~~l~~~~~~hPt 469 (478)
T 3dk9_A 391 YGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFA-VAVKMGATKADFDNTVAIHPT 469 (478)
T ss_dssp HCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHH-HHHHTTCBHHHHHTSCCCSSS
T ss_pred CCCccEEEEEeecCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCCHHHHhhcccCCCC
Confidence 111 1111 1135789998876 489999999998 55677776 999999886 8999999
Q ss_pred cchhh
Q psy2951 440 LGVVL 444 (1466)
Q Consensus 440 ~~e~~ 444 (1466)
++|.+
T Consensus 470 ~~e~~ 474 (478)
T 3dk9_A 470 SSEEL 474 (478)
T ss_dssp SGGGG
T ss_pred hHHHH
Confidence 99987
No 44
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=5.5e-36 Score=368.07 Aligned_cols=376 Identities=22% Similarity=0.265 Sum_probs=275.2
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCC----CCccchh-----------------ccc--------
Q psy2951 43 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD----RVKLSKQ-----------------LDI-------- 93 (1466)
Q Consensus 43 ~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~----~~~~~~~-----------------~~~-------- 93 (1466)
++||+|||||+||++||..|++.|+++.|++.++ ..... .+..++. ...
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~--~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRG--ALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTM 79 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS--SSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC--CcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCcc
Confidence 4799999999999999999999999887765432 22100 0000000 000
Q ss_pred Ccccc-----------cccChhhhhcCCeEEEeCceEEEeccccccEEEecCC--cEEecCEEEEccCCCCCCCCCCCCC
Q psy2951 94 KADSI-----------LLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDG--TSIDFTKIYLATGSSPRTISQADGV 160 (1466)
Q Consensus 94 ~~~~~-----------~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~~--~~~~~d~lviAtG~~~~~~~~~~~~ 160 (1466)
+...+ ...+..++++.+++++.++.+.. +....++.+.++ .++.||+||+|||++|..++ +++.
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i--~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~-~~g~ 156 (468)
T 2qae_A 80 DSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFE--TAHSIRVNGLDGKQEMLETKKTIIATGSEPTELP-FLPF 156 (468)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEE--ETTEEEEEETTSCEEEEEEEEEEECCCEEECCBT-TBCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEe--eCCEEEEEecCCceEEEEcCEEEECCCCCcCCCC-CCCC
Confidence 00111 11123456677999999987653 444556666677 67999999999999988655 3333
Q ss_pred CcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHH-HhCCc
Q psy2951 161 NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLF-ESKGV 239 (1466)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l-~~~GV 239 (1466)
+.. .+.+..+...+.. .+++++|||+|++|+|+|..+++.|.+|+++++.+.+++ .+++++.+.+.+.+ +++||
T Consensus 157 ~~~-~v~t~~~~~~~~~---~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~d~~~~~~l~~~l~~~~gv 231 (468)
T 2qae_A 157 DEK-VVLSSTGALALPR---VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP-TLDEDVTNALVGALAKNEKM 231 (468)
T ss_dssp CSS-SEECHHHHHTCSS---CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHTCC
T ss_pred CcC-ceechHHHhhccc---CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc-cCCHHHHHHHHHHHhhcCCc
Confidence 221 1235666665542 468999999999999999999999999999999987764 68899999999999 99999
Q ss_pred EEEcCceEEEEEecCCCCeEEEEcC--CC--cEEeccEEEEeeccccCccc--cccCCceecCCccEEECCCCCcCCCCE
Q psy2951 240 KFVMKANVSSFEKNEKNDVTAANLD--NG--TTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGV 313 (1466)
Q Consensus 240 ~i~~~~~v~~i~~~~~~~~~~v~~~--~g--~~i~~D~Vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~t~~~~i 313 (1466)
+++++++|++++.+++ .+ .+.+. +| +++++|.||+|+|++||+++ ++..|++++++|+|.||+++||+.|+|
T Consensus 232 ~i~~~~~v~~i~~~~~-~~-~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~I 309 (468)
T 2qae_A 232 KFMTSTKVVGGTNNGD-SV-SLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIPDV 309 (468)
T ss_dssp EEECSCEEEEEEECSS-SE-EEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTE
T ss_pred EEEeCCEEEEEEEcCC-eE-EEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCcccCCCCE
Confidence 9999999999987542 22 34443 56 67999999999999999988 677889998889999999999999999
Q ss_pred EEeccccc-ccCccCCCCcceeccHHHHHHHHHHHHHHhcCCCCC--CCCCCcccccccceeeEEEEeecCC-----ceE
Q psy2951 314 YAGGDIAY-APLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS--LSTIPFFWTMLFGVGFRFAGYAAGH-----TQV 385 (1466)
Q Consensus 314 ya~GD~~~-~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~~~--~~~~p~~~s~~~~~~~~~~G~~~~~-----~~~ 385 (1466)
||+|||+. .+ ..+..|..||+.+|.||++.... +..+|+ ....+..+.++|..... .++
T Consensus 310 yA~GD~~~~~~-----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~--~~~~~~~~a~vG~~e~~a~~~g~~~ 376 (468)
T 2qae_A 310 YAIGDVVDKGP-----------MLAHKAEDEGVACAEILAGKPGHVNYGVIPA--VIYTMPEVASVGKSEDELKKEGVAY 376 (468)
T ss_dssp EECGGGBSSSC-----------SCHHHHHHHHHHHHHHHTTCCCCCCTTSCCE--EECSSSEEEEEECCHHHHHHTTCCE
T ss_pred EEeeccCCCCC-----------ccHhHHHHHHHHHHHHHcCCCccCCCCCCCE--EEECCCceEEEeCCHHHHHhcCCCE
Confidence 99999987 33 34668999999999999986543 445553 22233456666764321 112
Q ss_pred EEec-----------ccCCCeEEEEEEc--CCEEEEEEEECCC--HHHHHHHHHHhcCCCcc-----ccccCcccchhh
Q psy2951 386 DIVG-----------DLEALKFTAYYSN--ADKVLAILTVGMD--PLAAQFAEQVLEFPYSS-----LPHSHRCLGVVL 444 (1466)
Q Consensus 386 ~~~g-----------~~~~~~~~~~~~~--~~~i~g~~~~~~~--~~~~~~~~~~i~~~~~~-----~~~~~p~~~e~~ 444 (1466)
.... .-+..+|.+++.+ +++|+|++++|.. +++..++ .+|+++.+. ++++|||++|.+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~e~i~~~~-~ai~~~~~~~~l~~~~~~~Pt~~e~~ 454 (468)
T 2qae_A 377 KVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEAC-LAMEYGASSEDVGRTCHAHPTMSEAL 454 (468)
T ss_dssp EEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHH-HHHHTTCBHHHHHTSCCCSSCTHHHH
T ss_pred EEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCCHHHHhhcccCCCCHHHHH
Confidence 1110 1135689999887 6899999999983 5666666 899999876 789999999988
No 45
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=4.2e-35 Score=360.10 Aligned_cols=366 Identities=22% Similarity=0.339 Sum_probs=280.8
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCC---------------------------CCCCC--CCCCchhhcc
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN---------------------------FLPYD--RVKLSKQLDI 1116 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~---------------------------~~~~~--~~~l~~~~~~ 1116 (1466)
+++|+|||||+||+++|..|++.|. +|+|||++. ..||. .++.....
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~--~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~-- 79 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGA--QVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTI-- 79 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCC--
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC--EEEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCcc--
Confidence 5789999999999999999999998 999999983 12222 11100000
Q ss_pred Ccccc---------cc---cChhhhccC-CcEEEcCCeEEEeecCCCCeEEecCC--cEEecCeEEEecCCCCCcCCCCC
Q psy2951 1117 KADSI---------LL---RTEEFYKDN-DIHVIKGKKIISDSELNEKKIKLQDG--TSIDFTKIYLATGSSPRTISQAD 1181 (1466)
Q Consensus 1117 ~~~~~---------~~---~~~~~~~~~-~v~~~~~~~v~~i~d~~~~~v~~~~g--~~~~yd~lvlAtG~~~~~~~~~~ 1181 (1466)
....+ .+ ...+++++. +++++.++ +..+ |.....|.+.+| ..+.||+||+|||++|+.|++|
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~-~~~~-~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~i~- 156 (467)
T 1zk7_A 80 DRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGE-ARFK-DDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIP- 156 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEE-EEEE-ETTEEEEEETTSSEEEEECSEEEECCCEEECCCCCT-
T ss_pred CHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEE-EEEc-cCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCCCC-
Confidence 00000 01 123556677 99999886 8889 877677777788 6899999999999999999999
Q ss_pred CCCcEEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCC
Q psy2951 1182 GVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKG 1261 (1466)
Q Consensus 1182 g~~~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~g 1261 (1466)
|++...++ +.+++..+. ..+++++|||+|++|+|+|..|++.|.+|+++++.+++++ +++++.+.+.+.++++|
T Consensus 157 G~~~~~~~-~~~~~~~~~---~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~~~l~~~G 230 (467)
T 1zk7_A 157 GLKESPYW-TSTEALASD---TIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR--EDPAIGEAVTAAFRAEG 230 (467)
T ss_dssp TTTTSCCB-CHHHHHHCS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT--SCHHHHHHHHHHHHHTT
T ss_pred CCCcCcee-cHHHHhccc---ccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC--CCHHHHHHHHHHHHhCC
Confidence 88732223 466665543 3479999999999999999999999999999999998886 78999999999999999
Q ss_pred cEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCccc--cccCCceeeCCCeEEeCCCccccCCCEEEe
Q psy2951 1262 VKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAG 1339 (1466)
Q Consensus 1262 v~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~ 1339 (1466)
|+++++++|++++ .+ +....|.++ +.++++|.||+|+|..|++++ ++..|++++.+|+|.||++++|+.|+|||+
T Consensus 231 v~i~~~~~v~~i~-~~-~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~iya~ 307 (467)
T 1zk7_A 231 IEVLEHTQASQVA-HM-DGEFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAA 307 (467)
T ss_dssp CEEETTCCEEEEE-EE-TTEEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEEC
T ss_pred CEEEcCCEEEEEE-Ee-CCEEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCcccCCCCEEEE
Confidence 9999999999998 33 344456666 458999999999999999885 577899988888999999999999999999
Q ss_pred cccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCCC--CCCCCccceeccccccEEEEeeCC------CCceEEEc
Q psy2951 1340 GDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT--SLSTIPFFWTMLFGVGFRFAGYAA------GHTQVDIV 1411 (1466)
Q Consensus 1340 GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~--~~~~~p~~w~~~~~~~~~~~g~~~------~~~~~~~~ 1411 (1466)
|||+..|.. |..|..||+.||.||++... .+..+|++ ..++..+..+|..+ +.+-.+..
T Consensus 308 GD~~~~~~~-----------~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~--~~~~~~~a~vG~~~~~a~~~g~~~~~~~ 374 (467)
T 1zk7_A 308 GDCTDQPQF-----------VYVAAAAGTRAAINMTGGDAALDLTAMPAV--VFTDPQVATVGYSEAEAHHDGIETDSRT 374 (467)
T ss_dssp STTBSSCCC-----------HHHHHHHHHHHHHHHTTCCCCCCCTTCEEE--ECSSSEEEEEECCHHHHHHTTCCEEEEE
T ss_pred eccCCCccc-----------HHHHHHHHHHHHHHHcCCCcccCCCCCCEE--EecCCceEEEecCHHHHHhcCCCeEEEE
Confidence 999987653 47899999999999998643 34567765 22346788888753 22211111
Q ss_pred C----------CcCCceEEEEEEe--CCEEEEEEEecCc--HHHHHHHHHHHcCCCCChhccccc
Q psy2951 1412 G----------DLEALKFTAYYSN--ADKVLAILTVGMD--PLAAQFAERIKMQKYIQKDQIENN 1462 (1466)
Q Consensus 1412 ~----------~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 1462 (1466)
- +.++..|++++++ +++|+|+..+|.. ..+..+..+|+.+. +.++|++.
T Consensus 375 ~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~--~~~~l~~~ 437 (467)
T 1zk7_A 375 LTLDNVPRALANFDTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNRM--TVQELADQ 437 (467)
T ss_dssp EEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTC--BHHHHHTS
T ss_pred EecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCC--CHHHHhcC
Confidence 0 1135568888886 7999999999997 44566778888874 55555443
No 46
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=6.2e-36 Score=367.21 Aligned_cols=374 Identities=22% Similarity=0.281 Sum_probs=275.3
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCC----CCccchh-----------------ccc------Cc
Q psy2951 43 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD----RVKLSKQ-----------------LDI------KA 95 (1466)
Q Consensus 43 ~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~----~~~~~~~-----------------~~~------~~ 95 (1466)
++||+||||||||++||..|++.|.++.|++ ++. .... .+..++. ... ..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE--~~~-~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVE--PKY-WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEe--CCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCH
Confidence 4799999999999999999999999877754 331 1100 0000000 000 00
Q ss_pred cc-----------ccccChhhhhcCCeEEEeCceEEEeccccccEEEecCC--cEEecCEEEEccCCCCCCCCCCCCCCc
Q psy2951 96 DS-----------ILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDG--TSIDFTKIYLATGSSPRTISQADGVNK 162 (1466)
Q Consensus 96 ~~-----------~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~~--~~~~~d~lviAtG~~~~~~~~~~~~~~ 162 (1466)
.. +...+.+.+++.+++++.++.+. .+....++.+.++ .++.||+||+|||++|+.++ .++.+.
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~--id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~-~~g~~~ 156 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF--ADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVP-GTSLSA 156 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE--SSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCT-TCCCBT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE--ecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCC-CCCCCc
Confidence 00 11112455667899999998765 3444556666667 68999999999999987655 333332
Q ss_pred EEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHHhCCcEEE
Q psy2951 163 VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFV 242 (1466)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~ 242 (1466)
. +.+..+...+.. .+++++|||+|++|+|+|..+++.|.+||++++.+.+++ .+++++.+.+.+.++++||+++
T Consensus 157 ~--~~~~~~~~~~~~---~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gv~i~ 230 (464)
T 2a8x_A 157 N--VVTYEEQILSRE---LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP-NEDADVSKEIEKQFKKLGVTIL 230 (464)
T ss_dssp T--EECHHHHHTCSS---CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHTCEEE
T ss_pred e--EEecHHHhhccc---cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHHcCCEEE
Confidence 1 235666655442 468999999999999999999999999999999987764 6889999999999999999999
Q ss_pred cCceEEEEEecCCCCeEEEEcC-CC--cEEeccEEEEeeccccCccc--cccCCceecCCccEEECCCCCcCCCCEEEec
Q psy2951 243 MKANVSSFEKNEKNDVTAANLD-NG--TTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAGG 317 (1466)
Q Consensus 243 ~~~~v~~i~~~~~~~~~~v~~~-~g--~~i~~D~Vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~t~~~~iya~G 317 (1466)
++++|++++.+++ .+ .+.+. +| +++++|.||+|+|++||+++ ++..|++++++|+|.||+++||+.|+|||+|
T Consensus 231 ~~~~v~~i~~~~~-~~-~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~G 308 (464)
T 2a8x_A 231 TATKVESIADGGS-QV-TVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGHIYAIG 308 (464)
T ss_dssp CSCEEEEEEECSS-CE-EEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBCSSTTEEECG
T ss_pred eCcEEEEEEEcCC-eE-EEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCccCCCCEEEeE
Confidence 9999999987542 23 34443 45 67999999999999999998 6778899988899999999999999999999
Q ss_pred ccccccCccCCCCcceeccHHHHHHHHHHHHHHhcC-CCCC---CCCCCcccccccceeeEEEEeecCC-----ceEEEe
Q psy2951 318 DIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVE-KKTS---LSTIPFFWTMLFGVGFRFAGYAAGH-----TQVDIV 388 (1466)
Q Consensus 318 D~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~-~~~~---~~~~p~~~s~~~~~~~~~~G~~~~~-----~~~~~~ 388 (1466)
||+..+ ..+..|..||+.+|.||++ .... +..+|+. ...+..+.++|..... .++...
T Consensus 309 D~~~~~-----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~--~~~~~~~a~vG~~e~~a~~~g~~~~~~ 375 (464)
T 2a8x_A 309 DVNGLL-----------QLAHVAEAQGVVAAETIAGAETLTLGDHRMLPRA--TFCQPNVASFGLTEQQARNEGYDVVVA 375 (464)
T ss_dssp GGGCSS-----------CSHHHHHHHHHHHHHHHHTCCCCCCCCGGGSCEE--ECSSSEEEEEECCHHHHHHTTCCEEEE
T ss_pred CcCCCc-----------cCHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEE--EECCCCeEEEcCCHHHHHhcCCCEEEE
Confidence 998753 3456899999999999998 4433 4455632 2223345666654321 112111
Q ss_pred c-----------ccCCCeEEEEEEc--CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc-----ccccCcccchhh
Q psy2951 389 G-----------DLEALKFTAYYSN--ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS-----LPHSHRCLGVVL 444 (1466)
Q Consensus 389 g-----------~~~~~~~~~~~~~--~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~-----~~~~~p~~~e~~ 444 (1466)
. .-+..+|.+++.+ +++|+|++++|. ++++..++ .+|+++.+. ++++|||++|.+
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~-~ai~~~~~~~~l~~~~~~~Pt~~e~~ 450 (464)
T 2a8x_A 376 KFPFTANAKAHGVGDPSGFVKLVADAKHGELLGGHLVGHDVAELLPELT-LAQRWDLTASELARNVHTHPTMSEAL 450 (464)
T ss_dssp EEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEEETTGGGGHHHHH-HHHHTTCBHHHHTTSCCCTTCTTHHH
T ss_pred EEEcchhhhhhhcCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHH-HHHHCCCCHHHHhhCccCCCChHHHH
Confidence 0 0135689999886 689999999998 35677777 999999876 789999999988
No 47
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=7.8e-36 Score=367.37 Aligned_cols=367 Identities=20% Similarity=0.289 Sum_probs=279.9
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCC----Cchhhc-------------------------c
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK----LSKQLD-------------------------I 1116 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~----l~~~~~-------------------------~ 1116 (1466)
+++|+|||||+||++||..|++.|. +|+|||+++.++..... .++.+. .
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~--~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~ 83 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGF--KTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRL 83 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC--CEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC--eEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCcc
Confidence 4689999999999999999999998 99999998754321000 001000 0
Q ss_pred Cccccc-----------ccChhhhccCCcEEEcCCeEEEeecCCCCeEEecC-C-cEEecCeEEEecCCCCCcCCCCCCC
Q psy2951 1117 KADSIL-----------LRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQD-G-TSIDFTKIYLATGSSPRTISQADGV 1183 (1466)
Q Consensus 1117 ~~~~~~-----------~~~~~~~~~~~v~~~~~~~v~~i~d~~~~~v~~~~-g-~~~~yd~lvlAtG~~~~~~~~~~g~ 1183 (1466)
+...+. ....+++.+.+++++.++ +..+ |+....|.+.+ + .++.||+||+|||++|+.|+++ |.
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~-~~~~-~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~i~-g~ 160 (474)
T 1zmd_A 84 NLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGY-GKIT-GKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGI-TI 160 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEEE-ETTEEEEECTTSCEEEEEEEEEEECCCEEECCCTTC-CC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEe-cCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCCCC-CC
Confidence 000000 001345567799999997 6678 87666677766 4 5799999999999999999988 87
Q ss_pred C--cEEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCC
Q psy2951 1184 N--KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKG 1261 (1466)
Q Consensus 1184 ~--~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~g 1261 (1466)
+ +++ +.+++.++. ..+++++|||+|++|+|+|..|++.|.+|+++++.++++++.+++++.+.+.+.++++|
T Consensus 161 ~~~~v~---t~~~~~~~~---~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~G 234 (474)
T 1zmd_A 161 DEDTIV---SSTGALSLK---KVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQG 234 (474)
T ss_dssp CSSSEE---CHHHHTTCS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTT
T ss_pred CcCcEE---cHHHHhhcc---ccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCC
Confidence 6 343 456664443 23689999999999999999999999999999999988876789999999999999999
Q ss_pred cEEEcCceEEEEEecCCCcEEEEE-----cCCCCeeecCEEEEeeccccCccc--cccCCceeeCCCeEEeCCCccccCC
Q psy2951 1262 VKFVMKANVSSFEKNEKNDVTAAN-----LDNGTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVP 1334 (1466)
Q Consensus 1262 v~~~~~~~v~~i~~~~~g~~~~v~-----l~~g~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~~~G~i~vd~~~~t~~~ 1334 (1466)
|+++++++|++++ .+++....+. ..+++++++|.||+|+|..|++++ ++.+|+.++.+|+|.||+++||+.|
T Consensus 235 v~i~~~~~v~~i~-~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~ 313 (474)
T 1zmd_A 235 FKFKLNTKVTGAT-KKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIP 313 (474)
T ss_dssp CEEECSEEEEEEE-ECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTCBCSST
T ss_pred CEEEeCceEEEEE-EcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCCccCCC
Confidence 9999999999998 3333313354 356778999999999999999997 6788999888889999999999999
Q ss_pred CEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCCCC--CCCCccceeccccccEEEEeeCCC-----Cce
Q psy2951 1335 GVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS--LSTIPFFWTMLFGVGFRFAGYAAG-----HTQ 1407 (1466)
Q Consensus 1335 ~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~~--~~~~p~~w~~~~~~~~~~~g~~~~-----~~~ 1407 (1466)
+|||+|||+..|.. ++.|..||+.||.||+|...+ |..+|++| .++..+-.+|..+. ..+
T Consensus 314 ~IyA~GD~~~~~~~-----------~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~--~~~~~~a~vG~~e~~a~~~g~~ 380 (474)
T 1zmd_A 314 NIYAIGDVVAGPML-----------AHKAEDEGIICVEGMAGGAVHIDYNCVPSVI--YTHPEVAWVGKSEEQLKEEGIE 380 (474)
T ss_dssp TEEECGGGSSSCCC-----------HHHHHHHHHHHHHHHTTCCCCCCGGGCCEEE--CSSSEEEEEECCHHHHHHHTCC
T ss_pred CEEEeeecCCCCcc-----------HHHHHHHHHHHHHHhcCCCCcCCCCCCCEEE--ECCCCeEEEeCCHHHHHhcCCC
Confidence 99999999986543 378999999999999997644 56678765 45677888887531 111
Q ss_pred EEEcC-----------CcCCceEEEEEEe--CCEEEEEEEecCc--HHHHHHHHHHHcCCCCChhcc
Q psy2951 1408 VDIVG-----------DLEALKFTAYYSN--ADKVLAILTVGMD--PLAAQFAERIKMQKYIQKDQI 1459 (1466)
Q Consensus 1408 ~~~~~-----------~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 1459 (1466)
+.+.. .-+...|++++++ +++|+|+..+|.. ..+..+..+|+.+. +.++|
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~--~~~~l 445 (474)
T 1zmd_A 381 YKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGA--SCEDI 445 (474)
T ss_dssp EEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTC--BHHHH
T ss_pred EEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCC--CHHHH
Confidence 22110 1134568888886 6899999999997 34677888888874 44555
No 48
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=8.4e-36 Score=368.46 Aligned_cols=378 Identities=21% Similarity=0.296 Sum_probs=273.3
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCC----Cccc-----------------hhcccC------
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDR----VKLS-----------------KQLDIK------ 94 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~~----~~~~-----------------~~~~~~------ 94 (1466)
.++||+||||||||++||..|++.|+++.|++..+. ..... +..+ ..+...
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~--~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 101 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRST--YGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKL 101 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS--SSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC--CCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCcc
Confidence 358999999999999999999999999888664322 11000 0000 000000
Q ss_pred -c-----------ccccccChhhhhcCCeEEEeCceEEEeccccccEEEecCC--cEEecCEEEEccCCCCCCCCCCCC-
Q psy2951 95 -A-----------DSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDG--TSIDFTKIYLATGSSPRTISQADG- 159 (1466)
Q Consensus 95 -~-----------~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~~--~~~~~d~lviAtG~~~~~~~~~~~- 159 (1466)
. ..+...+...+++.+++++.+..... +....++...++ .++.||+||||||++|..+|..+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~--~~~~~~v~~~~g~~~~~~~d~lViATGs~p~~ipg~~~~ 179 (491)
T 3urh_A 102 NLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVL--GQGKVSVTNEKGEEQVLEAKNVVIATGSDVAGIPGVEVA 179 (491)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEC--SSSEEEEECTTSCEEEEECSEEEECCCEECCCBTTBCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEe--cCCEEEEEeCCCceEEEEeCEEEEccCCCCCCCCCcccc
Confidence 0 01111233456678999999987653 444556666666 579999999999998765554431
Q ss_pred CCcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHHhCCc
Q psy2951 160 VNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGV 239 (1466)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~GV 239 (1466)
..... +.+..+...+. ..+++++|||+|++|+|+|..+++.|.+|+++++.+.++ +.+++++.+.+.+.+++.||
T Consensus 180 ~~~~~-~~~~~~~~~~~---~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-~~~d~~~~~~l~~~l~~~gV 254 (491)
T 3urh_A 180 FDEKT-IVSSTGALALE---KVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTIL-GGMDGEVAKQLQRMLTKQGI 254 (491)
T ss_dssp CCSSS-EECHHHHTSCS---SCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS-SSSCHHHHHHHHHHHHHTTC
T ss_pred cCCee-EEehhHhhhhh---hcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccc-ccCCHHHHHHHHHHHHhCCC
Confidence 11111 22445444432 346899999999999999999999999999999988776 46789999999999999999
Q ss_pred EEEcCceEEEEEecCCCCeEEEEcC---CC--cEEeccEEEEeeccccCccc--cccCCceecCCccEEECCCCCcCCCC
Q psy2951 240 KFVMKANVSSFEKNEKNDVTAANLD---NG--TTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPG 312 (1466)
Q Consensus 240 ~i~~~~~v~~i~~~~~~~~~~v~~~---~g--~~i~~D~Vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~t~~~~ 312 (1466)
++++++++++++.+++ . ..+.+. +| +++++|.||+|+|++|++++ ++..|++++++|+|.||++++|+.|+
T Consensus 255 ~v~~~~~v~~i~~~~~-~-~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~ 332 (491)
T 3urh_A 255 DFKLGAKVTGAVKSGD-G-AKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQTSIAG 332 (491)
T ss_dssp EEECSEEEEEEEEETT-E-EEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCBCSSTT
T ss_pred EEEECCeEEEEEEeCC-E-EEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCCCCCCC
Confidence 9999999999987542 2 223333 14 68999999999999999987 67788999999999999999999999
Q ss_pred EEEecccccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCCCC--CCCCCcccccccceeeEEEEeecCC-----ceE
Q psy2951 313 VYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS--LSTIPFFWTMLFGVGFRFAGYAAGH-----TQV 385 (1466)
Q Consensus 313 iya~GD~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~~~--~~~~p~~~s~~~~~~~~~~G~~~~~-----~~~ 385 (1466)
|||+|||++.+ ..+..|..||+.+|.||++.... +..+|+ .......+..+|.+... .++
T Consensus 333 IyA~GD~~~~~-----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~--~~~~~p~~a~vGlte~~a~~~g~~~ 399 (491)
T 3urh_A 333 VYAIGDVVRGP-----------MLAHKAEDEGVAVAEIIAGQAGHVNYDVIPG--VVYTQPEVASVGKTEEELKAAGVAY 399 (491)
T ss_dssp EEECGGGSSSC-----------CCHHHHHHHHHHHHHHHTTSCCCCCTTCCCE--EECSSSCEEEEECCHHHHHHTTCCE
T ss_pred EEEEEecCCCc-----------cchhHHHHHHHHHHHHHcCCCcccCCCCCCE--EEEccCCeEEEeCCHHHHHhCCCCE
Confidence 99999998654 34678999999999999987543 445553 22233345555654311 111
Q ss_pred EEe-----c------ccCCCeEEEEEEc--CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc-----ccccCcccchhh
Q psy2951 386 DIV-----G------DLEALKFTAYYSN--ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS-----LPHSHRCLGVVL 444 (1466)
Q Consensus 386 ~~~-----g------~~~~~~~~~~~~~--~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~-----~~~~~p~~~e~~ 444 (1466)
... . ..+..+|.+++.+ +++|+|++++|. +++++.++ .+|+++.+. ++++|||++|.+
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~-~ai~~~~t~~~l~~~~~~hPt~~e~~ 477 (491)
T 3urh_A 400 KIGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGEMIHEIA-VLMEFGGSSEDLGRTCHAHPTMSEAV 477 (491)
T ss_dssp EEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHH-HHHHTTCBHHHHHTSCCCSSCTTHHH
T ss_pred EEEEEecCcchhhhcCCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCcHHHHhcCccCCCChHHHH
Confidence 110 0 0135689998887 489999999998 55677777 999999886 789999999998
No 49
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.2e-35 Score=361.27 Aligned_cols=374 Identities=23% Similarity=0.318 Sum_probs=274.4
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCC---C-Cccchh----------------ccc-------Cc
Q psy2951 43 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD---R-VKLSKQ----------------LDI-------KA 95 (1466)
Q Consensus 43 ~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~---~-~~~~~~----------------~~~-------~~ 95 (1466)
++||+|||||+||++||..|++.|+++.|++.+ . .... . +..++. ... ..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~--~-~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 79 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG--N-LGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDF 79 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--C-TTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC--C-CCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 479999999999999999999999988876543 1 1100 0 000000 000 00
Q ss_pred cc-----------ccccChhhhhcCCeEEEeCceEEEeccccccEEEecCC-cEEecCEEEEccCCCCCCCCCCCCCCcE
Q psy2951 96 DS-----------ILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDG-TSIDFTKIYLATGSSPRTISQADGVNKV 163 (1466)
Q Consensus 96 ~~-----------~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~~-~~~~~d~lviAtG~~~~~~~~~~~~~~~ 163 (1466)
.. +...+...+++.+++++.++.+.. +....++.+.++ .++.||+||+|||++|..++. ++.+..
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~i--d~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~~-~g~~~~ 156 (455)
T 1ebd_A 80 AKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFV--DANTVRVVNGDSAQTYTFKNAIIATGSRPIELPN-FKFSNR 156 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEE--ETTEEEEEETTEEEEEECSEEEECCCEEECCBTT-BCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc--cCCeEEEEeCCCcEEEEeCEEEEecCCCCCCCCC-CCccce
Confidence 01 111224566778999999997753 344456666666 679999999999999886553 333221
Q ss_pred EEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHHhCCcEEEc
Q psy2951 164 FYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVM 243 (1466)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~ 243 (1466)
+.+..+...+.. .+++++|||+|++|+|+|..|++.|.+|+++++.+.+++ .+++++.+.+.+.+++.||++++
T Consensus 157 --v~~~~~~~~~~~---~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gv~i~~ 230 (455)
T 1ebd_A 157 --ILDSTGALNLGE---VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS-GFEKQMAAIIKKRLKKKGVEVVT 230 (455)
T ss_dssp --EECHHHHHTCSS---CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-TSCHHHHHHHHHHHHHTTCEEEE
T ss_pred --EecHHHHhcccc---CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-ccCHHHHHHHHHHHHHCCCEEEe
Confidence 235566655442 368999999999999999999999999999999887664 67899999999999999999999
Q ss_pred CceEEEEEecCCCCeEEEEcC---CCcEEeccEEEEeeccccCccc--cccCCceecCCccEEECCCCCcCCCCEEEecc
Q psy2951 244 KANVSSFEKNEKNDVTAANLD---NGTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 318 (1466)
Q Consensus 244 ~~~v~~i~~~~~~~~~~v~~~---~g~~i~~D~Vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~t~~~~iya~GD 318 (1466)
+++|++++.+++ .+ .+.+. +++++++|.||+|+|++|++++ ++..|++++++|+|.||+++||+.|+|||+||
T Consensus 231 ~~~v~~i~~~~~-~~-~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD 308 (455)
T 1ebd_A 231 NALAKGAEERED-GV-TVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGD 308 (455)
T ss_dssp SEEEEEEEEETT-EE-EEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBCSSTTEEECGG
T ss_pred CCEEEEEEEeCC-eE-EEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCcccCCCCEEEEec
Confidence 999999986542 22 33332 4568999999999999999987 67888999888999999999999999999999
Q ss_pred cccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCCCC--CCCCCcccccccceeeEEEEeecCC-----ceEEEec--
Q psy2951 319 IAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS--LSTIPFFWTMLFGVGFRFAGYAAGH-----TQVDIVG-- 389 (1466)
Q Consensus 319 ~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~~~--~~~~p~~~s~~~~~~~~~~G~~~~~-----~~~~~~g-- 389 (1466)
|+..+ ..+..|..||+.+|.||.+.... +..+|+ ....+..+.++|..... .++....
T Consensus 309 ~~~~~-----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~--~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~ 375 (455)
T 1ebd_A 309 IVPGP-----------ALAHKASYEGKVAAEAIAGHPSAVDYVAIPA--VVFSDPECASVGYFEQQAKDEGIDVIAAKFP 375 (455)
T ss_dssp GSSSC-----------CCHHHHHHHHHHHHHHHTSCCCCCCCSCCCE--EECSSSCEEEEECCHHHHHTTTCCEEEEEEE
T ss_pred cCCCc-----------ccHHHHHHHHHHHHHHHcCCCccCCCCCCCE--EEECCCceEEEeCCHHHHHhcCCCEEEEEEE
Confidence 98753 34568999999999999986543 345553 22233345566654311 1121110
Q ss_pred ---------ccCCCeEEEEEEc--CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc-----ccccCcccchhh
Q psy2951 390 ---------DLEALKFTAYYSN--ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS-----LPHSHRCLGVVL 444 (1466)
Q Consensus 390 ---------~~~~~~~~~~~~~--~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~-----~~~~~p~~~e~~ 444 (1466)
.-+..+|.+++.+ +++|+|++++|. +++++.++ .+|+++.+. ++++|||++|.+
T Consensus 376 ~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~-~ai~~~~~~~~l~~~~~~~Pt~~e~~ 447 (455)
T 1ebd_A 376 FAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELG-LAIEAGMTAEDIALTIHAHPTLGEIA 447 (455)
T ss_dssp GGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEESTTHHHHHHHHH-HHHHHTCBHHHHHHSCCCTTSSTHHH
T ss_pred cCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEeCCCHHHHHHHHH-HHHHCCCCHHHHhhcccCCCCHHHHH
Confidence 0135689999887 689999999998 35666666 899988876 799999999988
No 50
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=1.4e-35 Score=365.94 Aligned_cols=378 Identities=19% Similarity=0.284 Sum_probs=277.0
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCC----Cccch-----------------hccc--------
Q psy2951 43 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDR----VKLSK-----------------QLDI-------- 93 (1466)
Q Consensus 43 ~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~~----~~~~~-----------------~~~~-------- 93 (1466)
++||+||||||||++||..|++.|+++.|++..+ ...... +..++ ....
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~--~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~ 82 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRG--KLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKI 82 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS--SSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC--CcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCcc
Confidence 5799999999999999999999999877765422 111000 00000 0000
Q ss_pred Ccccc-----------cccChhhhhcCCeEEEeCceEEEeccccccEEEecCC--cE------EecCEEEEccCCCCCCC
Q psy2951 94 KADSI-----------LLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDG--TS------IDFTKIYLATGSSPRTI 154 (1466)
Q Consensus 94 ~~~~~-----------~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~~--~~------~~~d~lviAtG~~~~~~ 154 (1466)
...++ ...+.+.+++.+++++.++.+.. +....++.+.++ .+ +.||+||+|||++|+.+
T Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~--~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~~~ 160 (478)
T 1v59_A 83 NVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFE--DETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPF 160 (478)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEES--SSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc--cCCeEEEEecCCCcccccccceEEeCEEEECcCCCCCCC
Confidence 00010 01123456678999999997753 444455666565 56 99999999999998655
Q ss_pred CCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHH
Q psy2951 155 SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLF 234 (1466)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l 234 (1466)
|..+. .. ..+.+..++..+.. .+++++|||+|++|+|+|..|++.|.+||++++.+.+++ .+++++.+.+.+.+
T Consensus 161 ~g~~~-~~-~~v~~~~~~~~~~~---~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l 234 (478)
T 1v59_A 161 PGIEI-DE-EKIVSSTGALSLKE---IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA-SMDGEVAKATQKFL 234 (478)
T ss_dssp TTCCC-CS-SSEECHHHHTTCSS---CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS-SSCHHHHHHHHHHH
T ss_pred CCCCC-CC-ceEEcHHHHHhhhc---cCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc-ccCHHHHHHHHHHH
Confidence 54432 21 12335666665543 368999999999999999999999999999999988775 78899999999999
Q ss_pred HhCCcEEEcCceEEEEEecCCCCeEEEEcC-----CCcEEeccEEEEeeccccCcc--ccccCCceecCCccEEECCCCC
Q psy2951 235 ESKGVKFVMKANVSSFEKNEKNDVTAANLD-----NGTTIPADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEYLE 307 (1466)
Q Consensus 235 ~~~GV~i~~~~~v~~i~~~~~~~~~~v~~~-----~g~~i~~D~Vi~a~G~~p~~~--~l~~~gl~~~~~g~i~vd~~~~ 307 (1466)
++.||+++++++|++++..+++....+.+. +++++++|.||+|+|++||++ +++..|++++++|+|.||+++|
T Consensus 235 ~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~ 314 (478)
T 1v59_A 235 KKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQFN 314 (478)
T ss_dssp HHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCTTSB
T ss_pred HHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECcCCc
Confidence 999999999999999986211233344443 456899999999999999998 7788899999889999999999
Q ss_pred cCCCCEEEecccccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCC--CCCCCCCcccccccceeeEEEEeecC----
Q psy2951 308 TNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK--TSLSTIPFFWTMLFGVGFRFAGYAAG---- 381 (1466)
Q Consensus 308 t~~~~iya~GD~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~--~~~~~~p~~~s~~~~~~~~~~G~~~~---- 381 (1466)
|+.|+|||+|||+..+ ..+..|..||+.+|.||++.. .++..+|++|.... .+.++|....
T Consensus 315 t~~~~IyA~GD~~~~~-----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~--~~a~vG~~e~~a~~ 381 (478)
T 1v59_A 315 SKFPHIKVVGDVTFGP-----------MLAHKAEEEGIAAVEMLKTGHGHVNYNNIPSVMYSHP--EVAWVGKTEEQLKE 381 (478)
T ss_dssp CSSTTEEECGGGSSSC-----------CCHHHHHHHHHHHHHHHHHSCCCCCTTSCCEEECSSS--EEEEEECCHHHHHH
T ss_pred cCCCCEEEeeccCCCc-----------ccHHHHHHHHHHHHHHHcCCCCCCCCCCCCEEEEcCC--cEEEEECCHHHHHH
Confidence 9999999999998754 345689999999999999754 35677887765543 3456665431
Q ss_pred -CceEEEec-----------ccCCCeEEEEEEc--CCEEEEEEEECCC--HHHHHHHHHHhcCCCcc-----ccccCccc
Q psy2951 382 -HTQVDIVG-----------DLEALKFTAYYSN--ADKVLAILTVGMD--PLAAQFAEQVLEFPYSS-----LPHSHRCL 440 (1466)
Q Consensus 382 -~~~~~~~g-----------~~~~~~~~~~~~~--~~~i~g~~~~~~~--~~~~~~~~~~i~~~~~~-----~~~~~p~~ 440 (1466)
..++.... ..+..+|.+++.+ +++|+|++++|.. +++..++ .+|+.+.+. ++++|||+
T Consensus 382 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~-~~i~~~~~~~~l~~~~~~~Pt~ 460 (478)
T 1v59_A 382 AGIDYKIGKFPFAANSRAKTNQDTEGFVKILIDSKTERILGAHIIGPNAGEMIAEAG-LALEYGASAEDVARVCHAHPTL 460 (478)
T ss_dssp TTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHH-HHHHTTCBHHHHHTSCCCTTCT
T ss_pred cCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCCHHHHhhCCCCCCCH
Confidence 11121110 0134678888776 5999999999983 4555555 899998876 79999999
Q ss_pred chhh
Q psy2951 441 GVVL 444 (1466)
Q Consensus 441 ~e~~ 444 (1466)
+|.+
T Consensus 461 ~e~~ 464 (478)
T 1v59_A 461 SEAF 464 (478)
T ss_dssp THHH
T ss_pred HHHH
Confidence 9988
No 51
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=1.4e-35 Score=365.02 Aligned_cols=378 Identities=21% Similarity=0.285 Sum_probs=277.7
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCC----Cccchh------------------cc-------c
Q psy2951 43 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDR----VKLSKQ------------------LD-------I 93 (1466)
Q Consensus 43 ~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~~----~~~~~~------------------~~-------~ 93 (1466)
++||+||||||||++||..|++.|.++.|++.++ ...... +..++. .. .
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~--~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~ 83 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNE--TLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRL 83 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS--SSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC--CcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCcc
Confidence 5799999999999999999999999877765432 211000 000000 00 0
Q ss_pred Cccccc-----------ccChhhhhcCCeEEEeCceEEEeccccccEEEecC-C-cEEecCEEEEccCCCCCCCCCCCCC
Q psy2951 94 KADSIL-----------LRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQD-G-TSIDFTKIYLATGSSPRTISQADGV 160 (1466)
Q Consensus 94 ~~~~~~-----------~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~-~-~~~~~d~lviAtG~~~~~~~~~~~~ 160 (1466)
+...+. ..+..++++.+++++.++.+.. +....++.+.+ + .++.||+||+|||++|..++ +++.
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~--~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~-i~g~ 160 (474)
T 1zmd_A 84 NLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKIT--GKNQVTATKADGGTQVIDTKNILIATGSEVTPFP-GITI 160 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEE--ETTEEEEECTTSCEEEEEEEEEEECCCEEECCCT-TCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEe--cCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCC-CCCC
Confidence 011111 1124566778999999987654 34445666665 4 57999999999999988655 4443
Q ss_pred CcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHHhCCcE
Q psy2951 161 NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVK 240 (1466)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~ 240 (1466)
+... +.+..+...+.. .+++++|||+|++|+|+|..+++.|.+|+++++.+.++++.+++++.+.+.+.+++.||+
T Consensus 161 ~~~~-v~t~~~~~~~~~---~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~ 236 (474)
T 1zmd_A 161 DEDT-IVSSTGALSLKK---VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFK 236 (474)
T ss_dssp CSSS-EECHHHHTTCSS---CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCE
T ss_pred CcCc-EEcHHHHhhccc---cCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCE
Confidence 3211 125555555432 358999999999999999999999999999999988775478999999999999999999
Q ss_pred EEcCceEEEEEecCCCCeEEEE-----cCCCcEEeccEEEEeeccccCccc--cccCCceecCCccEEECCCCCcCCCCE
Q psy2951 241 FVMKANVSSFEKNEKNDVTAAN-----LDNGTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGV 313 (1466)
Q Consensus 241 i~~~~~v~~i~~~~~~~~~~v~-----~~~g~~i~~D~Vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~t~~~~i 313 (1466)
++++++|++++.++++.+ .+. .++++++++|.||+|+|++||+++ ++..|++++++|+|.||+++||+.|+|
T Consensus 237 i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~I 315 (474)
T 1zmd_A 237 FKLNTKVTGATKKSDGKI-DVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNI 315 (474)
T ss_dssp EECSEEEEEEEECTTSCE-EEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTCBCSSTTE
T ss_pred EEeCceEEEEEEcCCceE-EEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCCccCCCCE
Confidence 999999999987543213 333 456778999999999999999987 677889998889999999999999999
Q ss_pred EEecccccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCCC--CCCCCCcccccccceeeEEEEeecCC-----ceEE
Q psy2951 314 YAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT--SLSTIPFFWTMLFGVGFRFAGYAAGH-----TQVD 386 (1466)
Q Consensus 314 ya~GD~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~~--~~~~~p~~~s~~~~~~~~~~G~~~~~-----~~~~ 386 (1466)
||+|||+..+ ..+..|..||+.+|.||++... .+..+|+.| .....+.++|..... .++.
T Consensus 316 yA~GD~~~~~-----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~--~~~~~~a~vG~~e~~a~~~g~~~~ 382 (474)
T 1zmd_A 316 YAIGDVVAGP-----------MLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVI--YTHPEVAWVGKSEEQLKEEGIEYK 382 (474)
T ss_dssp EECGGGSSSC-----------CCHHHHHHHHHHHHHHHTTCCCCCCGGGCCEEE--CSSSEEEEEECCHHHHHHHTCCEE
T ss_pred EEeeecCCCC-----------ccHHHHHHHHHHHHHHhcCCCCcCCCCCCCEEE--ECCCCeEEEeCCHHHHHhcCCCEE
Confidence 9999998754 3456899999999999998653 345666543 223345666664321 1121
Q ss_pred Eec-----------ccCCCeEEEEEEc--CCEEEEEEEECCC--HHHHHHHHHHhcCCCcc-----ccccCcccchhh
Q psy2951 387 IVG-----------DLEALKFTAYYSN--ADKVLAILTVGMD--PLAAQFAEQVLEFPYSS-----LPHSHRCLGVVL 444 (1466)
Q Consensus 387 ~~g-----------~~~~~~~~~~~~~--~~~i~g~~~~~~~--~~~~~~~~~~i~~~~~~-----~~~~~p~~~e~~ 444 (1466)
... ..+..+|.+++.+ +++|+|++++|.. +++..++ .+|+.+.+. ++++|||++|.+
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~-~ai~~~~~~~~l~~~~~~~Pt~~e~~ 459 (474)
T 1zmd_A 383 VGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAA-LALEYGASCEDIARVCHAHPTLSEAF 459 (474)
T ss_dssp EEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHH-HHHHHTCBHHHHHHSCCCTTCTHHHH
T ss_pred EEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCCHHHHhhCcCCCCCHHHHH
Confidence 110 1135689999887 5899999999983 4566666 899988876 799999999988
No 52
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.6e-35 Score=364.92 Aligned_cols=377 Identities=23% Similarity=0.317 Sum_probs=275.0
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCC----ccchh-----------------ccc-------
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRV----KLSKQ-----------------LDI------- 93 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~~~----~~~~~-----------------~~~------- 93 (1466)
.++||+|||||+||++||..|++.|+++.|++.++. ...... ..++. ...
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~--~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 82 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGA--LGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEI 82 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS--SCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC--ccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCcc
Confidence 468999999999999999999999998887664432 111000 00000 000
Q ss_pred Cccc-----------ccccChhhhhcCCeEEEeCceEEEeccccccEEEecCC--cEEecCEEEEccCCCCCCCCCCCCC
Q psy2951 94 KADS-----------ILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDG--TSIDFTKIYLATGSSPRTISQADGV 160 (1466)
Q Consensus 94 ~~~~-----------~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~~--~~~~~d~lviAtG~~~~~~~~~~~~ 160 (1466)
.... +...+..++++.+++++.++.+.. +....++.+.++ ..+.||+||+|||++|..++. ++.
T Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~--~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~-~g~ 159 (470)
T 1dxl_A 83 DLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFV--SPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPG-VTI 159 (470)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEE--ETTEEEECCSSSCCEEEECSEEEECCCEEECCBTT-BCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEe--cCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCC-CCC
Confidence 0011 111123455667999999997753 334455555566 679999999999999886553 333
Q ss_pred CcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHHhCCcE
Q psy2951 161 NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVK 240 (1466)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~ 240 (1466)
+.. .+.+..+...+.. .+++++|||+|++|+|+|..|++.|.+|+++++.+.+++ .+++++.+.+.+.+++.||+
T Consensus 160 ~~~-~v~~~~~~~~~~~---~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~-~~~~~~~~~l~~~l~~~gv~ 234 (470)
T 1dxl_A 160 DEK-KIVSSTGALALSE---IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP-TMDAEIRKQFQRSLEKQGMK 234 (470)
T ss_dssp CSS-SEECHHHHTTCSS---CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHSSCC
T ss_pred Ccc-cEEeHHHhhhhhh---cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-cccHHHHHHHHHHHHHcCCE
Confidence 220 1224555554432 468999999999999999999999999999999887764 68899999999999999999
Q ss_pred EEcCceEEEEEecCCCCeEEEEcC---CC--cEEeccEEEEeeccccCccc--cccCCceecCCccEEECCCCCcCCCCE
Q psy2951 241 FVMKANVSSFEKNEKNDVTAANLD---NG--TTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGV 313 (1466)
Q Consensus 241 i~~~~~v~~i~~~~~~~~~~v~~~---~g--~~i~~D~Vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~t~~~~i 313 (1466)
++++++|.+++.+++ .+ .+.+. +| +++++|.||+|+|++||+++ ++..|++++++|+|.||+++||+.|+|
T Consensus 235 i~~~~~v~~i~~~~~-~~-~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~I 312 (470)
T 1dxl_A 235 FKLKTKVVGVDTSGD-GV-KLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNVSGV 312 (470)
T ss_dssp EECSEEEEEEECSSS-SE-EEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBCSSTTE
T ss_pred EEeCCEEEEEEEcCC-eE-EEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCccCCCCE
Confidence 999999999987542 22 23332 34 68999999999999999988 678899998889999999999999999
Q ss_pred EEecccccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCCCC--CCCCCcccccccceeeEEEEeecCC-----ceEE
Q psy2951 314 YAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS--LSTIPFFWTMLFGVGFRFAGYAAGH-----TQVD 386 (1466)
Q Consensus 314 ya~GD~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~~~--~~~~p~~~s~~~~~~~~~~G~~~~~-----~~~~ 386 (1466)
||+|||+..+ ..+..|..||+.+|.||++.... +..+|+ ....+..+.++|..... .++.
T Consensus 313 ya~GD~~~~~-----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~--~~~~~~~~a~vG~~e~~a~~~g~~~~ 379 (470)
T 1dxl_A 313 YAIGDVIPGP-----------MLAHKAEEDGVACVEYLAGKVGHVDYDKVPG--VVYTNPEVASVGKTEEQVKETGVEYR 379 (470)
T ss_dssp EECSTTSSSC-----------CCHHHHHHHHHHHHHHHTTSCCCCCTTSCCE--EECSSSEEEEEECCHHHHHHTTCCEE
T ss_pred EEEeccCCCC-----------ccHHHHHHHHHHHHHHHcCCCcCCCCCCCCE--EEECCCceEEEcCCHHHHHhcCCcEE
Confidence 9999998753 34568999999999999986543 444553 33333456666654321 1121
Q ss_pred Eec-----------ccCCCeEEEEEEc--CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc-----ccccCcccchhh
Q psy2951 387 IVG-----------DLEALKFTAYYSN--ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS-----LPHSHRCLGVVL 444 (1466)
Q Consensus 387 ~~g-----------~~~~~~~~~~~~~--~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~-----~~~~~p~~~e~~ 444 (1466)
... ..+..+|.+++.+ +++|+|++++|. ++++..++ .+|+++.+. ++++|||++|.+
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~-~ai~~~~~~~~l~~~~~~~Pt~~e~~ 456 (470)
T 1dxl_A 380 VGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAA-IALQYDASSEDIARVCHAHPTMSEAI 456 (470)
T ss_dssp EEEEEGGGCHHHHHHSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHH-HHHHTTCBHHHHHTSCCCSSCTTHHH
T ss_pred EEEEecccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCCHHHHhhcccCCCChHHHH
Confidence 110 0135689999886 689999999998 35666666 899999876 789999999988
No 53
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=1.9e-35 Score=364.45 Aligned_cols=391 Identities=23% Similarity=0.294 Sum_probs=281.2
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCC----CCCC---C-Cccc-----------------hhcccC--
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENF----LPYD---R-VKLS-----------------KQLDIK-- 94 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~----~~~~---~-~~~~-----------------~~~~~~-- 94 (1466)
.++||+|||||+||++||+.|++.|+++.|++...... .... . +..+ ..+...
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 46899999999999999999999999988876543110 0000 0 0000 000000
Q ss_pred -----cc-----------cccccChhhhhcCCeEEEeCceEEEeccccccEEEecCC--cEEecCEEEEccCCCCCCCCC
Q psy2951 95 -----AD-----------SILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDG--TSIDFTKIYLATGSSPRTISQ 156 (1466)
Q Consensus 95 -----~~-----------~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~~--~~~~~d~lviAtG~~~~~~~~ 156 (1466)
.. .+...+..++++.+++++.++.+.. +....++...++ ..+.||+||+|||++|..+|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~--~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~~~ 159 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLL--AGKKVEVTAADGSSQVLDTENVILASGSKPVEIPP 159 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEEC--STTCEEEECTTSCEEEECCSCEEECCCEEECCCTT
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEe--cCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCCCC
Confidence 00 0111123445567999999987653 445566766666 579999999999999886664
Q ss_pred CCCC-CcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHH
Q psy2951 157 ADGV-NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFE 235 (1466)
Q Consensus 157 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~ 235 (1466)
.+.. ..++ +..+...+. ..+++++|||+|++|+|+|..+++.|.+|+++++.+.+++ .+++++.+.+.+.++
T Consensus 160 ~~~~~~~v~---~~~~~~~~~---~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~ 232 (476)
T 3lad_A 160 APVDQDVIV---DSTGALDFQ---NVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP-AVDEQVAKEAQKILT 232 (476)
T ss_dssp SCCCSSSEE---EHHHHTSCS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-TSCHHHHHHHHHHHH
T ss_pred CCCCcccEE---echhhhccc---cCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc-ccCHHHHHHHHHHHH
Confidence 4422 2233 233433322 3468999999999999999999999999999999887764 788999999999999
Q ss_pred hCCcEEEcCceEEEEEecCCCCeEEEEcCCC---cEEeccEEEEeeccccCccc--cccCCceecCCccEEECCCCCcCC
Q psy2951 236 SKGVKFVMKANVSSFEKNEKNDVTAANLDNG---TTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNV 310 (1466)
Q Consensus 236 ~~GV~i~~~~~v~~i~~~~~~~~~~v~~~~g---~~i~~D~Vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~t~~ 310 (1466)
+.||+++++++|++++.+++ .+ .+.+.++ +++++|.||+|+|++|++++ ++..|++++++|+|.||++++|+.
T Consensus 233 ~~Gv~v~~~~~v~~i~~~~~-~~-~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~ 310 (476)
T 3lad_A 233 KQGLKILLGARVTGTEVKNK-QV-TVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCATSV 310 (476)
T ss_dssp HTTEEEEETCEEEEEEECSS-CE-EEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSBCSS
T ss_pred hCCCEEEECCEEEEEEEcCC-EE-EEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCcccCC
Confidence 99999999999999987543 33 3444433 67999999999999999984 677889999999999999999999
Q ss_pred CCEEEecccccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCCC--CCCCCCcccccccceeeEEEEeecCC-----c
Q psy2951 311 PGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT--SLSTIPFFWTMLFGVGFRFAGYAAGH-----T 383 (1466)
Q Consensus 311 ~~iya~GD~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~~--~~~~~p~~~s~~~~~~~~~~G~~~~~-----~ 383 (1466)
|+|||+|||+..+ ..+..|..||+.+|+||++... .+..+|+ .......+..+|.+... .
T Consensus 311 ~~Iya~GD~~~~~-----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~--~~~~~~~~a~vGlte~~a~~~g~ 377 (476)
T 3lad_A 311 PGVYAIGDVVRGA-----------MLAHKASEEGVVVAERIAGHKAQMNYDLIPA--VIYTHPEIAGVGKTEQALKAEGV 377 (476)
T ss_dssp TTEEECGGGSSSC-----------CCHHHHHHHHHHHHHHHHHCCCCCCTTCCCE--EECSSSEEEEEECCHHHHHHTTC
T ss_pred CCEEEEEccCCCc-----------ccHHHHHHHHHHHHHHhcCCCcccCCCCCCE--EEECcCCEEEeeCCHHHHHhcCC
Confidence 9999999998654 2466899999999999998654 3445553 22223334555554311 1
Q ss_pred eEEE-----ecc------cCCCeEEEEEEc--CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc-----ccccCcccchh
Q psy2951 384 QVDI-----VGD------LEALKFTAYYSN--ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS-----LPHSHRCLGVV 443 (1466)
Q Consensus 384 ~~~~-----~g~------~~~~~~~~~~~~--~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~-----~~~~~p~~~e~ 443 (1466)
++.. ... .+..+|.+++.+ +++|+|++++|. +++++.++ .+|+++.+. ++++|||++|.
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~-~ai~~~~t~~~l~~~~~~hPt~~e~ 456 (476)
T 3lad_A 378 AINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGA-IAMEFGTSAEDLGMMVFAHPALSEA 456 (476)
T ss_dssp CEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHH-HHHHHTCBHHHHHTSCCCSSCSHHH
T ss_pred CEEEEEEeccccchheecCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCcHHHHhcCccCCCChHHH
Confidence 1111 000 135689998886 489999999998 55677776 999998876 79999999999
Q ss_pred h--cccCCCCccccCC
Q psy2951 444 L--GKLDYHGTITISP 457 (1466)
Q Consensus 444 ~--~~~~~~~~~~~~~ 457 (1466)
+ ++..+.++..|.+
T Consensus 457 ~~~~~~~~~~~~~~~~ 472 (476)
T 3lad_A 457 LHEAALAVSGHAIHVA 472 (476)
T ss_dssp HHHHHHHHTTCCTTCC
T ss_pred HHHHHHHHhccccccc
Confidence 9 5555555555543
No 54
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=3.3e-35 Score=361.44 Aligned_cols=376 Identities=19% Similarity=0.249 Sum_probs=275.2
Q ss_pred CCCcEEEECCchHHHHHHHHHHh-cCCCCcEEEEc------CCCCCCCCC----Cccch----------------hccc-
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQ-NGFTGKLYFIT------DENFLPYDR----VKLSK----------------QLDI- 93 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~-~g~~v~i~~~~------~~~~~~~~~----~~~~~----------------~~~~- 93 (1466)
.++||+||||||||++||++|++ .|+++.|++.. +........ +..++ .+..
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~ 81 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWE 81 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCcc
Confidence 35899999999999999999999 99998887610 011111000 00000 0000
Q ss_pred --------Ccccc-----------cccChhhhhcC-CeEEEeCceEEEeccccccEEEec-----CC---cEEecCEEEE
Q psy2951 94 --------KADSI-----------LLRTEEFYKDN-DIHVIKGKKIISDSELNEKKIKLQ-----DG---TSIDFTKIYL 145 (1466)
Q Consensus 94 --------~~~~~-----------~~~~~~~~~~~-~v~~~~~~~v~~~~~~~~~~v~~~-----~~---~~~~~d~lvi 145 (1466)
+...+ ...+...+++. +++++.++.+.. +. .++.+. ++ ..+.||+|||
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i--~~--~~v~v~~~~~~~g~~~~~~~~d~lvi 157 (490)
T 1fec_A 82 LDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQ--DN--HTVLVRESADPNSAVLETLDTEYILL 157 (490)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEE--ET--TEEEEESSSSTTSCEEEEEEEEEEEE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEe--eC--CEEEEEeeccCCCCceEEEEcCEEEE
Confidence 00111 11223345677 999999986543 22 456553 56 6799999999
Q ss_pred ccCCCCCCCCCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhC---CCEEEEEeecCccccccc
Q psy2951 146 ATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASK---VKSVTVVGRGAVPFQESL 222 (1466)
Q Consensus 146 AtG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~---g~~Vtlv~~~~~~~~~~~ 222 (1466)
|||++|..++ +++.+.+ .+.++...+. ..+++++|||+|++|+|+|..++++ |.+|+++++.+.++ +.+
T Consensus 158 AtGs~p~~p~-i~g~~~~---~~~~~~~~~~---~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-~~~ 229 (490)
T 1fec_A 158 ATGSWPQHLG-IEGDDLC---ITSNEAFYLD---EAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL-RGF 229 (490)
T ss_dssp CCCEEECCCC-SBTGGGC---BCHHHHTTCS---SCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS-TTS
T ss_pred eCCCCCCCCC-CCCccce---ecHHHHhhhh---hcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc-ccc
Confidence 9999998554 5555432 2455554443 2467999999999999999999999 99999999998776 468
Q ss_pred CHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCCeEEEEcCCCcEEeccEEEEeeccccCcc-c-cccCCceecCCccE
Q psy2951 223 GKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN-Y-LDGKGVELNGQKAV 300 (1466)
Q Consensus 223 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~~~-~-l~~~gl~~~~~g~i 300 (1466)
++++.+.+.+.++++||+++++++|++++.++++ ...+.+++|+++++|.||+|+|++|+++ + ++..|++++++|+|
T Consensus 230 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I 308 (490)
T 1fec_A 230 DSELRKQLTEQLRANGINVRTHENPAKVTKNADG-TRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAI 308 (490)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTS-CEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCB
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCC-EEEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCE
Confidence 8999999999999999999999999999875432 3456778888999999999999999998 4 67889999988999
Q ss_pred EECCCCCcCCCCEEEecccccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCC---CCCCCCCcccccccceeeEEEE
Q psy2951 301 VVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK---TSLSTIPFFWTMLFGVGFRFAG 377 (1466)
Q Consensus 301 ~vd~~~~t~~~~iya~GD~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~---~~~~~~p~~~s~~~~~~~~~~G 377 (1466)
.||+++||+.|+|||+|||++.+ ..+..|..||+.+|.||++.. ..+..+|+ .......+.++|
T Consensus 309 ~Vd~~~~t~~~~IyA~GD~~~~~-----------~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~--~~~~~~~~a~vG 375 (490)
T 1fec_A 309 KVDAYSKTNVDNIYAIGDVTDRV-----------MLTPVAINEGAAFVDTVFANKPRATDHTKVAC--AVFSIPPMGVCG 375 (490)
T ss_dssp CCCTTCBCSSTTEEECGGGGCSC-----------CCHHHHHHHHHHHHHHHHSSCCCCCCCSSCCE--EECCSSCEEEEE
T ss_pred EECCCCccCCCCEEEEeccCCCc-----------cCHHHHHHHHHHHHHHhcCCCCCcCCCCCccE--EEECCCCeEEEe
Confidence 99999999999999999998632 457789999999999999753 24455553 222233455666
Q ss_pred eecCC-----ceEE-----Eec------ccCCCeEE-EEEEc--CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc----
Q psy2951 378 YAAGH-----TQVD-----IVG------DLEALKFT-AYYSN--ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS---- 432 (1466)
Q Consensus 378 ~~~~~-----~~~~-----~~g------~~~~~~~~-~~~~~--~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~---- 432 (1466)
..... ..+. +.. ..+..+|. +++.+ +++|+|++++|. +++++.++ .+|+++.+.
T Consensus 376 ~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~-~ai~~~~t~~~l~ 454 (490)
T 1fec_A 376 YVEEDAAKKYDQVAVYESSFTPLMHNISGSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVA-ICLKMGAKISDFY 454 (490)
T ss_dssp CCHHHHHHHCSEEEEEEEEECCHHHHHHSCTTCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHH-HHHHTTCBHHHHH
T ss_pred CCHHHHHhcCCCEEEEEeecChhhhhhhcCCCeEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHcCCCHHHHh
Confidence 54311 1111 111 11356788 88887 589999999998 34566666 899999876
Q ss_pred -ccccCcccchhh
Q psy2951 433 -LPHSHRCLGVVL 444 (1466)
Q Consensus 433 -~~~~~p~~~e~~ 444 (1466)
+++.|||++|.+
T Consensus 455 ~~~~~hPt~~e~~ 467 (490)
T 1fec_A 455 NTIGVHPTSAEEL 467 (490)
T ss_dssp TSCCCSSCSGGGG
T ss_pred ccccCCCCHHHHH
Confidence 799999999988
No 55
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=1.7e-35 Score=363.66 Aligned_cols=367 Identities=21% Similarity=0.274 Sum_probs=277.0
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCC----CCchhhc-----------------c--------
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRV----KLSKQLD-----------------I-------- 1116 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~----~l~~~~~-----------------~-------- 1116 (1466)
+++|+|||||+||++||..|++.|. +|+|||+++.++.... ..++.+. .
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~--~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGM--KTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTM 79 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC--CEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC--eEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCcc
Confidence 3689999999999999999999998 9999999875532100 0011000 0
Q ss_pred Ccccccc-----------cChhhhccCCcEEEcCCeEEEeecCCCCeEEecCC--cEEecCeEEEecCCCCCcCCCCCCC
Q psy2951 1117 KADSILL-----------RTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDG--TSIDFTKIYLATGSSPRTISQADGV 1183 (1466)
Q Consensus 1117 ~~~~~~~-----------~~~~~~~~~~v~~~~~~~v~~i~d~~~~~v~~~~g--~~~~yd~lvlAtG~~~~~~~~~~g~ 1183 (1466)
....+.. ...+++++.+++++.++ +..+ ++....|.+.+| .++.||+||+|||++|+.|+++ |.
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~-~~~i-~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~~~-g~ 156 (468)
T 2qae_A 80 DSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGE-GSFE-TAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFL-PF 156 (468)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEE-EEEE-ETTEEEEEETTSCEEEEEEEEEEECCCEEECCBTTB-CC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEe-eCCEEEEEecCCceEEEEcCEEEECCCCCcCCCCCC-CC
Confidence 0000000 01234556789999998 5568 876666777777 7899999999999999999888 77
Q ss_pred C--cEEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHH-HhC
Q psy2951 1184 N--KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLF-ESK 1260 (1466)
Q Consensus 1184 ~--~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~-~~~ 1260 (1466)
+ +++ +.+++..+.+ .+++++|||+|++|+|+|..|++.|.+|+++++.+++++ .+++++.+.+.+.+ +++
T Consensus 157 ~~~~v~---t~~~~~~~~~---~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~d~~~~~~l~~~l~~~~ 229 (468)
T 2qae_A 157 DEKVVL---SSTGALALPR---VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP-TLDEDVTNALVGALAKNE 229 (468)
T ss_dssp CSSSEE---CHHHHHTCSS---CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHT
T ss_pred CcCcee---chHHHhhccc---CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc-cCCHHHHHHHHHHHhhcC
Confidence 6 433 5667765542 479999999999999999999999999999999998886 68899999999999 999
Q ss_pred CcEEEcCceEEEEEecCCCcEEEEEcC--CC--CeeecCEEEEeeccccCccc--cccCCceeeCCCeEEeCCCccccCC
Q psy2951 1261 GVKFVMKANVSSFEKNEKNDVTAANLD--NG--TTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVP 1334 (1466)
Q Consensus 1261 gv~~~~~~~v~~i~~~~~g~~~~v~l~--~g--~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~~~G~i~vd~~~~t~~~ 1334 (1466)
||+++++++|++++ .+++. ..+.+. +| +++++|.||+|+|..|++++ ++..|+.++.+|+|.||+++||+.|
T Consensus 230 gv~i~~~~~v~~i~-~~~~~-~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~ 307 (468)
T 2qae_A 230 KMKFMTSTKVVGGT-NNGDS-VSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIP 307 (468)
T ss_dssp CCEEECSCEEEEEE-ECSSS-EEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSBCSST
T ss_pred CcEEEeCCEEEEEE-EcCCe-EEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCcccCCC
Confidence 99999999999998 33333 345554 67 68999999999999999997 6788999988889999999999999
Q ss_pred CEEEeccccc-CCCccCCCceeeeecHHHHHHHHHHHHHHhcCCCCC--CCCCccceeccccccEEEEeeCC-----CCc
Q psy2951 1335 GVYAGGDIAY-APLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS--LSTIPFFWTMLFGVGFRFAGYAA-----GHT 1406 (1466)
Q Consensus 1335 ~v~a~GD~a~-~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~~--~~~~p~~w~~~~~~~~~~~g~~~-----~~~ 1406 (1466)
+|||+|||+. .|.. ++.|..||+.||.||+|...+ +..+|++ ..++..+-.+|..+ ...
T Consensus 308 ~IyA~GD~~~~~~~~-----------~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~--~~~~~~~a~vG~~e~~a~~~g~ 374 (468)
T 2qae_A 308 DVYAIGDVVDKGPML-----------AHKAEDEGVACAEILAGKPGHVNYGVIPAV--IYTMPEVASVGKSEDELKKEGV 374 (468)
T ss_dssp TEEECGGGBSSSCSC-----------HHHHHHHHHHHHHHHTTCCCCCCTTSCCEE--ECSSSEEEEEECCHHHHHHTTC
T ss_pred CEEEeeccCCCCCcc-----------HhHHHHHHHHHHHHHcCCCccCCCCCCCEE--EECCCceEEEeCCHHHHHhcCC
Confidence 9999999998 5443 378999999999999997655 4556644 44567788888752 111
Q ss_pred eEEEcC-----------CcCCceEEEEEEe--CCEEEEEEEecCc--HHHHHHHHHHHcCCCCChhcccc
Q psy2951 1407 QVDIVG-----------DLEALKFTAYYSN--ADKVLAILTVGMD--PLAAQFAERIKMQKYIQKDQIEN 1461 (1466)
Q Consensus 1407 ~~~~~~-----------~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 1461 (1466)
++.+-. .-+...|++++++ +++|+|+..+|.. ..+..+.-+|+.+ ++.++|++
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~--~~~~~l~~ 442 (468)
T 2qae_A 375 AYKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYG--ASSEDVGR 442 (468)
T ss_dssp CEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTT--CBHHHHHT
T ss_pred CEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC--CCHHHHhh
Confidence 222210 1124568888885 7999999999997 4456667778877 44555533
No 56
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=2e-35 Score=363.45 Aligned_cols=375 Identities=20% Similarity=0.268 Sum_probs=274.5
Q ss_pred CCcEEEECCchHHHHHHHHHHh-cCCCCcEEEEcC------CCCCCCC----CCccch----------------hccc--
Q psy2951 43 KDTFIVVGGGPSGATCVETLRQ-NGFTGKLYFITD------ENFLPYD----RVKLSK----------------QLDI-- 93 (1466)
Q Consensus 43 ~~dVvIIGgG~AGl~aA~~l~~-~g~~v~i~~~~~------~~~~~~~----~~~~~~----------------~~~~-- 93 (1466)
++||+||||||||++||+.|++ .|+++.|++... ....... .+..++ .+..
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 5899999999999999999999 999988876100 1111000 000000 0000
Q ss_pred -------Cccccc-----------ccChhhhhcC-CeEEEeCceEEEeccccccEEEec---C-----CcEEecCEEEEc
Q psy2951 94 -------KADSIL-----------LRTEEFYKDN-DIHVIKGKKIISDSELNEKKIKLQ---D-----GTSIDFTKIYLA 146 (1466)
Q Consensus 94 -------~~~~~~-----------~~~~~~~~~~-~v~~~~~~~v~~~~~~~~~~v~~~---~-----~~~~~~d~lviA 146 (1466)
+..++. ..+...+++. +++++.++....+ .+++.+. + ++.+.||+||||
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~----~~~v~v~~~~~~~~~~~~~~~~d~lViA 162 (495)
T 2wpf_A 87 DGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLES----KNVVVVRETADPKSAVKERLQADHILLA 162 (495)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEE----TTEEEEESSSSTTSCEEEEEEEEEEEEC
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEee----CCEEEEeecCCccCCCCeEEEcCEEEEe
Confidence 001111 1122345567 9999999865432 3567775 4 567999999999
Q ss_pred cCCCCCCCCCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhC---CCEEEEEeecCcccccccC
Q psy2951 147 TGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASK---VKSVTVVGRGAVPFQESLG 223 (1466)
Q Consensus 147 tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~---g~~Vtlv~~~~~~~~~~~~ 223 (1466)
||++|+.++ +++.+.++ +.++...+. ..+++++|||+|++|+|+|..|+++ |.+||++++.+.++ +.++
T Consensus 163 TGs~p~~p~-i~G~~~~~---~~~~~~~~~---~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-~~~d 234 (495)
T 2wpf_A 163 TGSWPQMPA-IPGIEHCI---SSNEAFYLP---EPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL-RGFD 234 (495)
T ss_dssp CCEEECCCC-CTTGGGCE---EHHHHTTCS---SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC-TTSC
T ss_pred CCCCcCCCC-CCCccccc---cHHHHHhhh---hcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc-cccC
Confidence 999998654 66654433 344544433 2467999999999999999999999 99999999988776 4688
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCCeEEEEcCCCcEEeccEEEEeeccccCccc--cccCCceecCCccEE
Q psy2951 224 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVV 301 (1466)
Q Consensus 224 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~~~~--l~~~gl~~~~~g~i~ 301 (1466)
+++.+.+.+.++++||+++++++|++++.++++ ...+.+.+|+++++|.||+|+|++||+++ ++..|++++++|+|.
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~ 313 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLNTDG-SKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQ 313 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTS-CEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCc-eEEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEE
Confidence 999999999999999999999999999875422 34577788889999999999999999984 678899999889999
Q ss_pred ECCCCCcCCCCEEEecccccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCC---CCCCCCCcccccccceeeEEEEe
Q psy2951 302 VNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK---TSLSTIPFFWTMLFGVGFRFAGY 378 (1466)
Q Consensus 302 vd~~~~t~~~~iya~GD~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~---~~~~~~p~~~s~~~~~~~~~~G~ 378 (1466)
||+++||+.|+|||+|||+..+ ..+..|..||+.+|.||++.. ..+..+|+ .......+.++|.
T Consensus 314 Vd~~~~t~~~~IyA~GD~~~~~-----------~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~--~~~~~~~~a~vGl 380 (495)
T 2wpf_A 314 VDEFSRTNVPNIYAIGDITDRL-----------MLTPVAINEGAALVDTVFGNKPRKTDHTRVAS--AVFSIPPIGTCGL 380 (495)
T ss_dssp CCTTCBCSSTTEEECGGGGCSC-----------CCHHHHHHHHHHHHHHHHSSCCCCCCCSSCEE--EECCSSCEEEEEC
T ss_pred ECCCCccCCCCEEEEeccCCCc-----------cCHHHHHHHHHHHHHHhcCCCCCcCCCCCCCE--EEECCCCeEEEeC
Confidence 9999999999999999998643 456789999999999999753 23455553 1122334556665
Q ss_pred ecCC-----ceE-----EEec------ccCCCeE-EEEEEc--CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc-----
Q psy2951 379 AAGH-----TQV-----DIVG------DLEALKF-TAYYSN--ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS----- 432 (1466)
Q Consensus 379 ~~~~-----~~~-----~~~g------~~~~~~~-~~~~~~--~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~----- 432 (1466)
.... ..+ .+.. ..+..+| .+++.+ +++|+|++++|. +++++.++ .+|+.+.+.
T Consensus 381 ~e~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~-~ai~~~~t~~~l~~ 459 (495)
T 2wpf_A 381 IEEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVG-VCLRLNAKISDFYN 459 (495)
T ss_dssp CHHHHHHHSSEEEEEEEEECCTHHHHHSCTTCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHH-HHHHTTCBHHHHHH
T ss_pred CHHHHHhcCCCEEEEEEecCchhhhhhcCCCcEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCCHHHHhh
Confidence 4311 111 1111 1135678 888887 589999999998 34566666 899999876
Q ss_pred ccccCcccchhh
Q psy2951 433 LPHSHRCLGVVL 444 (1466)
Q Consensus 433 ~~~~~p~~~e~~ 444 (1466)
+++.|||++|.+
T Consensus 460 ~~~~hPt~~e~~ 471 (495)
T 2wpf_A 460 TIGVHPTSAEEL 471 (495)
T ss_dssp SCCCSSCSGGGG
T ss_pred cccCCCChHHHH
Confidence 799999999988
No 57
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=2.4e-35 Score=359.35 Aligned_cols=370 Identities=21% Similarity=0.287 Sum_probs=273.3
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCc-----cc-----------------hhccc-------
Q psy2951 43 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK-----LS-----------------KQLDI------- 93 (1466)
Q Consensus 43 ~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~~~~-----~~-----------------~~~~~------- 93 (1466)
++||+|||||+||++||.+|++.|.++.|++.+. . . ..+. .+ ..+..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~--~-G-G~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~ 79 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE--L-G-GTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKF 79 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC--T-T-HHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC--C-C-CcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCcc
Confidence 5899999999999999999999999888876432 1 0 0000 00 00000
Q ss_pred Cccc-----------ccccChhhhhcCCeEEEeCceEEEeccccccEEEecCCcEEecCEEEEccCCCCCCCCCCCCCCc
Q psy2951 94 KADS-----------ILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNK 162 (1466)
Q Consensus 94 ~~~~-----------~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~~~~~ 162 (1466)
+... +...+...+++.+++++.++....+ .+++.+ +++++.||+||||||++|..++ +++.+.
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~----~~~v~~-~g~~~~~d~lviAtGs~p~~p~-i~g~~~ 153 (450)
T 1ges_A 80 NWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVD----AKTLEV-NGETITADHILIATGGRPSHPD-IPGVEY 153 (450)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEE----TTEEEE-TTEEEEEEEEEECCCEEECCCC-STTGGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEec----CCEEEE-CCEEEEeCEEEECCCCCCCCCC-CCCccc
Confidence 0001 1111233456789999999875432 256777 6778999999999999988554 555543
Q ss_pred EEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHHhCCcEEE
Q psy2951 163 VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFV 242 (1466)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~ 242 (1466)
..+..+...+. ..+++++|||+|++|+|+|..|++.|.+|+++++.+.++ +.+++++.+.+.+.+++.||+++
T Consensus 154 ---~~~~~~~~~~~---~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-~~~~~~~~~~l~~~l~~~Gv~i~ 226 (450)
T 1ges_A 154 ---GIDSDGFFALP---ALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL-PSFDPMISETLVEVMNAEGPQLH 226 (450)
T ss_dssp ---SBCHHHHHHCS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-TTSCHHHHHHHHHHHHHHSCEEE
T ss_pred ---eecHHHhhhhh---hcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh-hhhhHHHHHHHHHHHHHCCCEEE
Confidence 23555555543 236899999999999999999999999999999987766 46889999999999999999999
Q ss_pred cCceEEEEEecCCCCeEEEEcCCCcEEeccEEEEeeccccCccc--cccCCceecCCccEEECCCCCcCCCCEEEecccc
Q psy2951 243 MKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 320 (1466)
Q Consensus 243 ~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~t~~~~iya~GD~~ 320 (1466)
++++|++++.++++ ...+.+++|+++++|.||+|+|++|++++ ++..|++++++|+|.||+++||+.|+|||+|||+
T Consensus 227 ~~~~v~~i~~~~~~-~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t~~~~IyA~GD~~ 305 (450)
T 1ges_A 227 TNAIPKAVVKNTDG-SLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNT 305 (450)
T ss_dssp CSCCEEEEEECTTS-CEEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECSGGG
T ss_pred eCCEEEEEEEeCCc-EEEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCccCCCCEEEEeccC
Confidence 99999999875432 24567788889999999999999999983 5778899998899999999999999999999998
Q ss_pred cccCccCCCCcceeccHHHHHHHHHHHHHHhcCCC----CCCCCCCcccccccceeeEEEEeecCC-------ceEEEe-
Q psy2951 321 YAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK----TSLSTIPFFWTMLFGVGFRFAGYAAGH-------TQVDIV- 388 (1466)
Q Consensus 321 ~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~----~~~~~~p~~~s~~~~~~~~~~G~~~~~-------~~~~~~- 388 (1466)
+.+ ..+..|..||+.+|.||++.. .++..+|+.. .....+..+|..... ..+...
T Consensus 306 ~~~-----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~--~~~~~~a~vG~~e~~a~~~~g~~~~~~~~ 372 (450)
T 1ges_A 306 GAV-----------ELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVV--FSHPPIGTVGLTEPQAREQYGDDQVKVYK 372 (450)
T ss_dssp TSC-----------CCHHHHHHHHHHHHHHHHTTCTTCCCCCSSCCEEE--CCSSCEEEEECCHHHHHHHHCGGGEEEEE
T ss_pred CCC-----------ccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCeEE--ECCCceEEEeCCHHHHHhcCCCCcEEEEE
Confidence 643 356789999999999999753 2455566421 112234455543211 112111
Q ss_pred ------c----ccCCCeEEEEEEc--CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc-----ccccCcccchhh
Q psy2951 389 ------G----DLEALKFTAYYSN--ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS-----LPHSHRCLGVVL 444 (1466)
Q Consensus 389 ------g----~~~~~~~~~~~~~--~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~-----~~~~~p~~~e~~ 444 (1466)
+ ..+..+|.+++.+ +++|+|++++|. +++++.++ .+|+++.+. ++++|||++|.+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~-~ai~~~~t~~~l~~~~~~hPt~~e~~ 446 (450)
T 1ges_A 373 SSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFA-VALKMGATKKDFDNTVAIHPTAAEEF 446 (450)
T ss_dssp EEEECHHHHTSSSCCEEEEEEEEETTTTEEEEEEEESTTHHHHHHHHH-HHHHTTCBHHHHHTSCCCSSCSGGGG
T ss_pred EECchhhHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCCHHHHhcCccCCCChHHHH
Confidence 0 1135678888886 589999999998 44566666 899999876 799999999987
No 58
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.5e-35 Score=360.77 Aligned_cols=366 Identities=23% Similarity=0.309 Sum_probs=274.3
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCC---C-CCchhhc-----------------------cCc
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDR---V-KLSKQLD-----------------------IKA 1118 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~---~-~l~~~~~-----------------------~~~ 1118 (1466)
+++|+|||||+||++||.+|++.|. +|+|||++ .++... . ..++.+. ...
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~--~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 79 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQ--KVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDF 79 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTC--CEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC--eEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 3689999999999999999999998 99999997 322100 0 0011000 000
Q ss_pred ccccc-----------cChhhhccCCcEEEcCCeEEEeecCCCCeEEecCC-cEEecCeEEEecCCCCCcCCCCCCCCcE
Q psy2951 1119 DSILL-----------RTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDG-TSIDFTKIYLATGSSPRTISQADGVNKV 1186 (1466)
Q Consensus 1119 ~~~~~-----------~~~~~~~~~~v~~~~~~~v~~i~d~~~~~v~~~~g-~~~~yd~lvlAtG~~~~~~~~~~g~~~v 1186 (1466)
..+.. ...+++++.+++++.++ +..+ ++....|.+.+| .++.||+||+|||++|+.|+++ |.+..
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~-~~~i-d~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~~~-g~~~~ 156 (455)
T 1ebd_A 80 AKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGE-AYFV-DANTVRVVNGDSAQTYTFKNAIIATGSRPIELPNF-KFSNR 156 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESE-EEEE-ETTEEEEEETTEEEEEECSEEEECCCEEECCBTTB-CCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEc-cCCeEEEEeCCCcEEEEeCEEEEecCCCCCCCCCC-Cccce
Confidence 00000 01235567799999998 4558 876666777777 6899999999999999999888 77632
Q ss_pred EEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEc
Q psy2951 1187 FYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVM 1266 (1466)
Q Consensus 1187 ~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~ 1266 (1466)
+.+.+++..+. ..+++++|||+|++|+|+|..|++.|.+|+++++.+++++ .+++++.+.+.+.+++.||++++
T Consensus 157 --v~~~~~~~~~~---~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gv~i~~ 230 (455)
T 1ebd_A 157 --ILDSTGALNLG---EVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS-GFEKQMAAIIKKRLKKKGVEVVT 230 (455)
T ss_dssp --EECHHHHHTCS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-TSCHHHHHHHHHHHHHTTCEEEE
T ss_pred --EecHHHHhccc---cCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-ccCHHHHHHHHHHHHHCCCEEEe
Confidence 33566765543 2479999999999999999999999999999999988876 57899999999999999999999
Q ss_pred CceEEEEEecCCCcEEEEEcC---CCCeeecCEEEEeeccccCccc--cccCCceeeCCCeEEeCCCccccCCCEEEecc
Q psy2951 1267 KANVSSFEKNEKNDVTAANLD---NGTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 1341 (1466)
Q Consensus 1267 ~~~v~~i~~~~~g~~~~v~l~---~g~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD 1341 (1466)
+++|++++ .+++. ..+.+. +++++++|.||+|+|..|++++ ++.+|+.++.+|+|.||+++||+.|+|||+||
T Consensus 231 ~~~v~~i~-~~~~~-~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD 308 (455)
T 1ebd_A 231 NALAKGAE-EREDG-VTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGD 308 (455)
T ss_dssp SEEEEEEE-EETTE-EEEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBCSSTTEEECGG
T ss_pred CCEEEEEE-EeCCe-EEEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCcccCCCCEEEEec
Confidence 99999998 33322 345543 4578999999999999999997 67889999888899999999999999999999
Q ss_pred cccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCCCC--CCCCccceeccccccEEEEeeCC-----CCceEEEcC--
Q psy2951 1342 IAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS--LSTIPFFWTMLFGVGFRFAGYAA-----GHTQVDIVG-- 1412 (1466)
Q Consensus 1342 ~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~~--~~~~p~~w~~~~~~~~~~~g~~~-----~~~~~~~~~-- 1412 (1466)
|+..|.. ++.|..||+.||.||+|...+ |..+|+ ...++..+-.+|..+ ...++.+-.
T Consensus 309 ~~~~~~~-----------~~~A~~~g~~aa~~i~~~~~~~~~~~~p~--~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~ 375 (455)
T 1ebd_A 309 IVPGPAL-----------AHKASYEGKVAAEAIAGHPSAVDYVAIPA--VVFSDPECASVGYFEQQAKDEGIDVIAAKFP 375 (455)
T ss_dssp GSSSCCC-----------HHHHHHHHHHHHHHHTSCCCCCCCSCCCE--EECSSSCEEEEECCHHHHHTTTCCEEEEEEE
T ss_pred cCCCccc-----------HHHHHHHHHHHHHHHcCCCccCCCCCCCE--EEECCCceEEEeCCHHHHHhcCCCEEEEEEE
Confidence 9986543 378999999999999997655 445664 444567787888742 111222211
Q ss_pred ---------CcCCceEEEEEEe--CCEEEEEEEecCc--HHHHHHHHHHHcCCCCChhccc
Q psy2951 1413 ---------DLEALKFTAYYSN--ADKVLAILTVGMD--PLAAQFAERIKMQKYIQKDQIE 1460 (1466)
Q Consensus 1413 ---------~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 1460 (1466)
.-+...|++++++ +++|+|+..+|.. ..+..+.-+|+.+ ++.++|+
T Consensus 376 ~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~--~~~~~l~ 434 (455)
T 1ebd_A 376 FAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAG--MTAEDIA 434 (455)
T ss_dssp GGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHHT--CBHHHHH
T ss_pred cCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEeCCCHHHHHHHHHHHHHCC--CCHHHHh
Confidence 0124568888885 7999999999997 3456666677777 3445553
No 59
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=6.2e-35 Score=356.71 Aligned_cols=370 Identities=21% Similarity=0.261 Sum_probs=273.9
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCc-----cch----------------hccc-------
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK-----LSK----------------QLDI------- 93 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~~~~-----~~~----------------~~~~------- 93 (1466)
+++||+|||||+||++||.+|++.|.++.|++.+. . . ..+. .++ .+..
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~--~-G-G~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~ 78 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA--L-G-GTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTL 78 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC--T-T-HHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---C
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC--C-C-CcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCc
Confidence 35899999999999999999999999888876432 1 0 0000 000 0000
Q ss_pred Ccc-----------cccccChhhhhcCCeEEEeCceEEEeccccccEEEecCCcEEecCEEEEccCCCCCCCCCCCCCCc
Q psy2951 94 KAD-----------SILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNK 162 (1466)
Q Consensus 94 ~~~-----------~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~~~~~ 162 (1466)
+.. .+...+...+++.+++++.++....+ .+++.+ ++.++.||+||+|||++|..++ +++.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~----~~~v~~-~g~~~~~d~lviAtGs~p~~p~-i~G~~~ 152 (463)
T 2r9z_A 79 DWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVD----AHTIEV-EGQRLSADHIVIATGGRPIVPR-LPGAEL 152 (463)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEE----TTEEEE-TTEEEEEEEEEECCCEEECCCS-CTTGGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEcc----CCEEEE-CCEEEEcCEEEECCCCCCCCCC-CCCccc
Confidence 000 11112233456789999999865432 356777 6678999999999999988554 555543
Q ss_pred EEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHHhCCcEEE
Q psy2951 163 VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFV 242 (1466)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~ 242 (1466)
..+..+...+.. .+++++|||+|++|+|+|..|++.|.+|+++++.+.++ +.+++++.+.+.+.+++.||+++
T Consensus 153 ---~~~~~~~~~~~~---~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l-~~~~~~~~~~l~~~l~~~gv~i~ 225 (463)
T 2r9z_A 153 ---GITSDGFFALQQ---QPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL-FQFDPLLSATLAENMHAQGIETH 225 (463)
T ss_dssp ---SBCHHHHHHCSS---CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-TTSCHHHHHHHHHHHHHTTCEEE
T ss_pred ---eecHHHHhhhhc---cCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc-cccCHHHHHHHHHHHHHCCCEEE
Confidence 234555555432 36799999999999999999999999999999988766 46789999999999999999999
Q ss_pred cCceEEEEEecCCCCeEEEEcCCCc-EEeccEEEEeeccccCccc--cccCCceecCCccEEECCCCCcCCCCEEEeccc
Q psy2951 243 MKANVSSFEKNEKNDVTAANLDNGT-TIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 319 (1466)
Q Consensus 243 ~~~~v~~i~~~~~~~~~~v~~~~g~-~i~~D~Vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~t~~~~iya~GD~ 319 (1466)
++++|++++.++++ ..+.+++|+ ++++|.||+|+|++|++++ ++..|++++++|+|.||++++|+.|+|||+|||
T Consensus 226 ~~~~v~~i~~~~~~--~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~ 303 (463)
T 2r9z_A 226 LEFAVAALERDAQG--TTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTNVPGVYALGDI 303 (463)
T ss_dssp SSCCEEEEEEETTE--EEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBCSSTTEEECGGG
T ss_pred eCCEEEEEEEeCCe--EEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCccCCCCEEEEeec
Confidence 99999999865422 457778888 8999999999999999974 467789998889999999999999999999999
Q ss_pred ccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCC----CCCCCCCcccccccceeeEEEEeecCC------ceEEE--
Q psy2951 320 AYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK----TSLSTIPFFWTMLFGVGFRFAGYAAGH------TQVDI-- 387 (1466)
Q Consensus 320 ~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~----~~~~~~p~~~s~~~~~~~~~~G~~~~~------~~~~~-- 387 (1466)
++.+ ..+..|..||+.+|.||++.. ..+..+|+.. .....+.++|..... ..+..
T Consensus 304 ~~~~-----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~--~~~~~~a~vGl~e~~a~~~~g~~~~~~~ 370 (463)
T 2r9z_A 304 TGRD-----------QLTPVAIAAGRRLAERLFDGQSERKLDYDNIPTVV--FAHPPLSKVGLSEPEARERLGDVLTVYE 370 (463)
T ss_dssp GTSC-----------CCHHHHHHHHHHHHHHHHSCCTTCCCCCSSCCEEE--CCSSCEEEEECCHHHHHHHHCSCEEEEE
T ss_pred CCCc-----------ccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCEEE--eCCCCeEEEcCCHHHHHhcCCCCEEEEE
Confidence 8643 456789999999999999754 3455666421 112234455543210 11211
Q ss_pred ---e--c----ccCCCeEEEEEEc--CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc-----ccccCcccchhh
Q psy2951 388 ---V--G----DLEALKFTAYYSN--ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS-----LPHSHRCLGVVL 444 (1466)
Q Consensus 388 ---~--g----~~~~~~~~~~~~~--~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~-----~~~~~p~~~e~~ 444 (1466)
. + ..+..+|.+++.+ +++|+|++++|. ++++..++ .+|+++.+. +++.|||++|.+
T Consensus 371 ~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~-~ai~~~~t~~~l~~~~~~hPt~~e~~ 444 (463)
T 2r9z_A 371 TSFTPMRYALNEHGPKTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFA-VAVKMGATKADFDNTVAIHPGSAEEL 444 (463)
T ss_dssp EEECCGGGTTSSSCCCEEEEEEEETTTTEEEEEEEESTTGGGTSHHHH-HHHHTTCBHHHHHTSCCCSSSSGGGG
T ss_pred EEcccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCCHHHHhcCccCCCCHHHHH
Confidence 1 0 1135678888886 589999999998 45666666 899999876 799999999998
No 60
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=1.8e-34 Score=358.10 Aligned_cols=369 Identities=24% Similarity=0.300 Sum_probs=281.6
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCC----CCchhhccC---------------ccccccc-
Q psy2951 1065 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRV----KLSKQLDIK---------------ADSILLR- 1124 (1466)
Q Consensus 1065 ~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~----~l~~~~~~~---------------~~~~~~~- 1124 (1466)
.+++|||||||+||++||..|++.|. +|+|||+++.++.... ..++.+... ...+..+
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~--~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 119 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGG--RQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKV 119 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTC--CEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC--CEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhh
Confidence 45789999999999999999999998 9999999874331100 001110000 0011000
Q ss_pred -------------Ch---hhh-----ccCCcEEEcCCeEEEeecCCCCeEEecCCcEEecCeEEEecCCCCCcCCCCCCC
Q psy2951 1125 -------------TE---EFY-----KDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGV 1183 (1466)
Q Consensus 1125 -------------~~---~~~-----~~~~v~~~~~~~v~~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~ 1183 (1466)
.. +++ .+.++++++..++..+ ++ ++|.+. +..+.||+||+|||++|+.|+++ |.
T Consensus 120 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i-~~--~~v~~~-g~~~~~d~lViATGs~p~~p~i~-G~ 194 (523)
T 1mo9_A 120 VGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVI-DN--HTVEAA-GKVFKAKNLILAVGAGPGTLDVP-GV 194 (523)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEE-ET--TEEEET-TEEEEBSCEEECCCEECCCCCST-TT
T ss_pred hhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEe-eC--CEEEEC-CEEEEeCEEEECCCCCCCCCCCC-Cc
Confidence 12 455 6779999845569999 75 678876 77899999999999999999998 87
Q ss_pred C--cEEEecCHHHHH-hhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhC
Q psy2951 1184 N--KVFYLRTVEDAN-NIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESK 1260 (1466)
Q Consensus 1184 ~--~v~~~~~~~~~~-~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~ 1260 (1466)
+ ++++ .+++. .+.. .++++++|||+|++|+|+|..+++.|.+|+++++.+.+++ .+++++.+.+.+.++++
T Consensus 195 ~~~~v~~---~~~~~~~l~~--~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~ 268 (523)
T 1mo9_A 195 NAKGVFD---HATLVEELDY--EPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKL-IKDNETRAYVLDRMKEQ 268 (523)
T ss_dssp TSBTEEE---HHHHHHHCCS--CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-CCSHHHHHHHHHHHHHT
T ss_pred ccCcEee---HHHHHHHHHh--cCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccc-cccHHHHHHHHHHHHhC
Confidence 7 4654 44554 3332 1249999999999999999999999999999999998876 57899999999999999
Q ss_pred CcEEEcCceEEEEEecCCCcE--EEEEcCCCC-eeecCEEEEeeccccCcc-ccccCCceeeCCCeEEeCCCccccCCCE
Q psy2951 1261 GVKFVMKANVSSFEKNEKNDV--TAANLDNGT-TIPADLVIVGIGTVLNTN-YLDGKGVELNGQKAVVVNEYLETNVPGV 1336 (1466)
Q Consensus 1261 gv~~~~~~~v~~i~~~~~g~~--~~v~l~~g~-~i~~D~vv~a~G~~p~~~-~~~~~gl~~~~~G~i~vd~~~~t~~~~v 1336 (1466)
||+++++++|++++..+++++ ..|.+.+|+ ++++|.||+|+|..|+++ +++.+|+.++.+|+|.||+++||+.|+|
T Consensus 269 GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~Vd~~~~t~~~~I 348 (523)
T 1mo9_A 269 GMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYLQTSVPNV 348 (523)
T ss_dssp TCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCCCTTSBCSSTTE
T ss_pred CcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEECCCCccCCCCE
Confidence 999999999999983234443 457888887 899999999999999999 8999999998889999999999999999
Q ss_pred EEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCCCC--CCCCccceeccccccEEEEeeCC------CCceE
Q psy2951 1337 YAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS--LSTIPFFWTMLFGVGFRFAGYAA------GHTQV 1408 (1466)
Q Consensus 1337 ~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~~--~~~~p~~w~~~~~~~~~~~g~~~------~~~~~ 1408 (1466)
||+|||+..|.. ++.|..||++||.||+|...+ +..+|++|. ++..+..+|..+ +.+-.
T Consensus 349 yA~GD~~~~~~~-----------~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~--~~~~~a~vG~~e~~a~~~g~~~~ 415 (523)
T 1mo9_A 349 YAVGDLIGGPME-----------MFKARKSGCYAARNVMGEKISYTPKNYPDFLH--THYEVSFLGMGEEEARAAGHEIV 415 (523)
T ss_dssp EECGGGGCSSCS-----------HHHHHHHHHHHHHHHTTCCCCCCCCSCCEEEE--SSSEEEEEECCHHHHHHTTCCEE
T ss_pred EEEeecCCCccc-----------HHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEE--CCCceEEEeCCHHHHHhCCCCEE
Confidence 999999986643 378999999999999996654 567887764 456788888753 22211
Q ss_pred EEc--C-C-----------------------cCCceEEEEEEe--CCEEEEEEEecCc-H-HHHHHHHHHHcCCCCChhc
Q psy2951 1409 DIV--G-D-----------------------LEALKFTAYYSN--ADKVLAILTVGMD-P-LAAQFAERIKMQKYIQKDQ 1458 (1466)
Q Consensus 1409 ~~~--~-~-----------------------~~~~~~~~~~~~--~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ 1458 (1466)
+.. - + .+...|++.+++ +++|+|+..+|.. . .+..+.-+|+.+ ++.++
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~--~t~~~ 493 (523)
T 1mo9_A 416 TIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLIKQG--LTVDE 493 (523)
T ss_dssp EEEESCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTT--CBHHH
T ss_pred EEEEecccccccccccccccccccceEEeecCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC--CCHHH
Confidence 111 0 1 123458888774 6899999999995 2 356677788887 45555
Q ss_pred ccc
Q psy2951 1459 IEN 1461 (1466)
Q Consensus 1459 ~~~ 1461 (1466)
|++
T Consensus 494 l~~ 496 (523)
T 1mo9_A 494 LGD 496 (523)
T ss_dssp HHT
T ss_pred HHh
Confidence 543
No 61
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=8.3e-36 Score=367.91 Aligned_cols=366 Identities=19% Similarity=0.304 Sum_probs=272.3
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCC----Cchhhc-----------------c--------
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK----LSKQLD-----------------I-------- 1116 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~----l~~~~~-----------------~-------- 1116 (1466)
+++|+|||||+||+++|..|++.|. +|+|||+++.++..... .++.+. .
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~--~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~ 82 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGF--NTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKI 82 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC--CEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC--eEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCcc
Confidence 3689999999999999999999998 99999997654311000 001000 0
Q ss_pred Cccccc-----------ccChhhhccCCcEEEcCCeEEEeecCCCCeEEecCC--cE------EecCeEEEecCCCCCcC
Q psy2951 1117 KADSIL-----------LRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDG--TS------IDFTKIYLATGSSPRTI 1177 (1466)
Q Consensus 1117 ~~~~~~-----------~~~~~~~~~~~v~~~~~~~v~~i~d~~~~~v~~~~g--~~------~~yd~lvlAtG~~~~~~ 1177 (1466)
+...+. ....+++++.+++++.++.+ .+ +.....|.+.+| .+ +.||+||+|||++|+.
T Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~-~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~~- 159 (478)
T 1v59_A 83 NVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGS-FE-DETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTP- 159 (478)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-ES-SSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEECC-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Ec-cCCeEEEEecCCCcccccccceEEeCEEEECcCCCCCC-
Confidence 000000 00123456679999999843 45 655555666666 56 9999999999998854
Q ss_pred CCCCCCC--cEEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHH
Q psy2951 1178 SQADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITK 1255 (1466)
Q Consensus 1178 ~~~~g~~--~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~ 1255 (1466)
+| |.+ + ..+.+.+++..+.+ .+++++|||+|++|+|+|..|++.|.+|+++++.+++++ .+++++.+.+.+
T Consensus 160 -~~-g~~~~~-~~v~~~~~~~~~~~---~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~ 232 (478)
T 1v59_A 160 -FP-GIEIDE-EKIVSSTGALSLKE---IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA-SMDGEVAKATQK 232 (478)
T ss_dssp -CT-TCCCCS-SSEECHHHHTTCSS---CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS-SSCHHHHHHHHH
T ss_pred -CC-CCCCCC-ceEEcHHHHHhhhc---cCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc-ccCHHHHHHHHH
Confidence 34 443 3 22346677755543 379999999999999999999999999999999998887 788999999999
Q ss_pred HHHhCCcEEEcCceEEEEEecCCCcEEEEEcC-----CCCeeecCEEEEeeccccCcc--ccccCCceeeCCCeEEeCCC
Q psy2951 1256 LFESKGVKFVMKANVSSFEKNEKNDVTAANLD-----NGTTIPADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEY 1328 (1466)
Q Consensus 1256 ~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~-----~g~~i~~D~vv~a~G~~p~~~--~~~~~gl~~~~~G~i~vd~~ 1328 (1466)
.+++.||+++++++|++++..+++....|.+. +++++++|.||+|+|..|+++ +++..|+.++.+|+|.||++
T Consensus 233 ~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~ 312 (478)
T 1v59_A 233 FLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQ 312 (478)
T ss_dssp HHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCTT
T ss_pred HHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECcC
Confidence 99999999999999999982113444556665 457899999999999999998 78999999988899999999
Q ss_pred ccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCCC--CCCCCccceeccccccEEEEeeCC---
Q psy2951 1329 LETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT--SLSTIPFFWTMLFGVGFRFAGYAA--- 1403 (1466)
Q Consensus 1329 ~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~--~~~~~p~~w~~~~~~~~~~~g~~~--- 1403 (1466)
+||+.|+|||+|||+..|.. ++.|..||+.||.||+|... .|..+|++|.. +..+-.+|..+
T Consensus 313 ~~t~~~~IyA~GD~~~~~~~-----------~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~--~~~~a~vG~~e~~a 379 (478)
T 1v59_A 313 FNSKFPHIKVVGDVTFGPML-----------AHKAEEEGIAAVEMLKTGHGHVNYNNIPSVMYS--HPEVAWVGKTEEQL 379 (478)
T ss_dssp SBCSSTTEEECGGGSSSCCC-----------HHHHHHHHHHHHHHHHHSCCCCCTTSCCEEECS--SSEEEEEECCHHHH
T ss_pred CccCCCCEEEeeccCCCccc-----------HHHHHHHHHHHHHHHcCCCCCCCCCCCCEEEEc--CCcEEEEECCHHHH
Confidence 99999999999999986543 37899999999999998654 47788988864 34566667642
Q ss_pred --CCceEEE-------------cCCcCCceEEEEEEe--CCEEEEEEEecCc--HHHHHHHHHHHcCCCCChhccc
Q psy2951 1404 --GHTQVDI-------------VGDLEALKFTAYYSN--ADKVLAILTVGMD--PLAAQFAERIKMQKYIQKDQIE 1460 (1466)
Q Consensus 1404 --~~~~~~~-------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 1460 (1466)
...++.+ .+ +...|++++++ +++++|+..+|.. ..+..+..+|+.+. +.++|+
T Consensus 380 ~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~--~~~~l~ 451 (478)
T 1v59_A 380 KEAGIDYKIGKFPFAANSRAKTNQ--DTEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGA--SAEDVA 451 (478)
T ss_dssp HHTTCCEEEEEEEGGGCHHHHHTT--CCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTC--BHHHHH
T ss_pred HHcCCCEEEEEEecccchhhhhcC--CCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCC--CHHHHh
Confidence 1111221 12 23456666664 7999999999996 44678888888884 444443
No 62
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=8e-35 Score=356.86 Aligned_cols=373 Identities=16% Similarity=0.209 Sum_probs=276.9
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCC----Cccc----------------hhcc-------cC
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDR----VKLS----------------KQLD-------IK 94 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~~----~~~~----------------~~~~-------~~ 94 (1466)
.++||+||||||||++||+.|++.|+++.|++... ..... +..+ ..+. ..
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~---~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 80 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFR---YGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFD 80 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC---TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC---CCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcC
Confidence 35899999999999999999999999988876521 11000 0000 0000 00
Q ss_pred -----------cccccccChhhhhcCCeEEEeCceEEEeccccccEEEe-cCCcEEecCEEEEccCCCCCCCCCCCCCCc
Q psy2951 95 -----------ADSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKL-QDGTSIDFTKIYLATGSSPRTISQADGVNK 162 (1466)
Q Consensus 95 -----------~~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~-~~~~~~~~d~lviAtG~~~~~~~~~~~~~~ 162 (1466)
...+...+..++++.+++++.+..... +..++.+ .++..+.||+||+|||++|...|.+++.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i----~~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~ 156 (463)
T 4dna_A 81 WAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELA----GPNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHEL 156 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEES----SSSEEEETTTTEEEEEEEEEECCCEEECCCTTSTTGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEe----eCCEEEEecCCeEEEeCEEEEecCCCcccCCCCCCccc
Confidence 011122234455667999999975543 2357777 567789999999999999882334565543
Q ss_pred EEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHHhCCcEEE
Q psy2951 163 VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFV 242 (1466)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~ 242 (1466)
+ .+..+...+. ..+++++|||+|++|+|+|..+++.|.+|+++++.+.++ +.+++++.+.+.+.+++.||+++
T Consensus 157 ~---~~~~~~~~~~---~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l-~~~~~~~~~~l~~~l~~~Gv~i~ 229 (463)
T 4dna_A 157 C---ITSNEAFDLP---ALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL-SRFDQDMRRGLHAAMEEKGIRIL 229 (463)
T ss_dssp C---BCHHHHTTCS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-TTSCHHHHHHHHHHHHHTTCEEE
T ss_pred c---ccHHHHhhhh---cCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-cccCHHHHHHHHHHHHHCCCEEE
Confidence 2 2445544433 346899999999999999999999999999999988776 57889999999999999999999
Q ss_pred cCceEEEEEecCCCCeEEEE-cCCCcEEeccEEEEeeccccCccc--cccCCceecCCccEEECCCCCcCCCCEEEeccc
Q psy2951 243 MKANVSSFEKNEKNDVTAAN-LDNGTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 319 (1466)
Q Consensus 243 ~~~~v~~i~~~~~~~~~~v~-~~~g~~i~~D~Vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~t~~~~iya~GD~ 319 (1466)
+++.|++++.++++ ...+. +++|+ +++|.||+|+|++|++.+ ++..|++++++|+|.||+++||+.|+|||+|||
T Consensus 230 ~~~~v~~i~~~~~~-~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~iya~GD~ 307 (463)
T 4dna_A 230 CEDIIQSVSADADG-RRVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGDV 307 (463)
T ss_dssp CSCCEEEEEECTTS-CEEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBCSSTTEEECSGG
T ss_pred CCCEEEEEEEcCCC-EEEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCCCCCCEEEEEec
Confidence 99999999876433 34577 88887 999999999999999987 678899999999999999999999999999999
Q ss_pred ccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCCC---CCCCCCcccccccceeeEEEEeecCC-----ceE-----E
Q psy2951 320 AYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT---SLSTIPFFWTMLFGVGFRFAGYAAGH-----TQV-----D 386 (1466)
Q Consensus 320 ~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~~---~~~~~p~~~s~~~~~~~~~~G~~~~~-----~~~-----~ 386 (1466)
++.+ ..+..|..||+.+|+||++... .+..+|+.. .....+..+|.+... ..+ .
T Consensus 308 ~~~~-----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~--~~~p~~a~vG~te~~a~~~~~~~~~~~~~ 374 (463)
T 4dna_A 308 TDRV-----------QLTPVAIHEAMCFIETEYKNNPTSPDHDLIATAV--FSQPEIGTVGITEEEAARKFQEIEVYRAE 374 (463)
T ss_dssp GSSC-----------CCHHHHHHHHHHHHHHHHSSCCCCCCCSCCCEEE--CSSSCEEEEECCHHHHHHHSSEEEEEEEE
T ss_pred CCCC-----------CChHHHHHHHHHHHHHHcCCCCcccCCCCCCEEE--ECCCCeEEecCCHHHHHHcCCCeEEEEEe
Confidence 8743 3466899999999999997643 445566421 112234445543311 111 1
Q ss_pred Eecc------cCCCeEEEEEEc--CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc-----ccccCcccchhh
Q psy2951 387 IVGD------LEALKFTAYYSN--ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS-----LPHSHRCLGVVL 444 (1466)
Q Consensus 387 ~~g~------~~~~~~~~~~~~--~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~-----~~~~~p~~~e~~ 444 (1466)
+... -+..+|.+++.+ +++|+|++++|. +++++.++ .+|+++.+. ++++|||++|.+
T Consensus 375 ~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~-~ai~~~~t~~~l~~~~~~hPt~~e~~ 446 (463)
T 4dna_A 375 FRPMKATLSGRKEKTIMKLVVNAADRKVVGAHILGHDAGEMAQLLG-ISLRAGCTKDDFDRTMAVHPTAAEEL 446 (463)
T ss_dssp ECCTTHHHHCCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHH-HHHHTTCBHHHHHTSCCCTTCSGGGG
T ss_pred ccccchhhcCCCceEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCCHHHHhhcccCCCCHHHHH
Confidence 1111 135789999887 489999999998 45677776 999999886 899999999998
No 63
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.3e-35 Score=362.58 Aligned_cols=361 Identities=19% Similarity=0.246 Sum_probs=276.9
Q ss_pred CcEEEECCchHHHHHHHHHHhc---CCCCcEEEEcCCCCCCCCCC----CCchhh-------------------------
Q psy2951 1067 DTFIVVGGGPSGATCVETLRQN---GFTGKLYFITDENFLPYDRV----KLSKQL------------------------- 1114 (1466)
Q Consensus 1067 ~~vvIVG~G~aGl~aA~~L~~~---g~~~~i~li~~~~~~~~~~~----~l~~~~------------------------- 1114 (1466)
++|||||||+||++||..|++. |. +|+|||+++ .+.... ..++.+
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~--~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~ 79 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETT--QVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDA 79 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTE--EEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcC--EEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCC
Confidence 5899999999999999999999 87 999999986 321100 000000
Q ss_pred ccCcccc-----------cccChhhhccCCcEEEcCCeEEEeecC------CCCeEEecCCc--EEecCeEEEecCCCCC
Q psy2951 1115 DIKADSI-----------LLRTEEFYKDNDIHVIKGKKIISDSEL------NEKKIKLQDGT--SIDFTKIYLATGSSPR 1175 (1466)
Q Consensus 1115 ~~~~~~~-----------~~~~~~~~~~~~v~~~~~~~v~~i~d~------~~~~v~~~~g~--~~~yd~lvlAtG~~~~ 1175 (1466)
..+...+ .....+++++.+++++.++ +..+ ++ ....|.+++|. .+.||+||+|||++|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i-~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~ 157 (499)
T 1xdi_A 80 KISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGR-GELI-DSTPGLARHRIKATAADGSTSEHEADVVLVATGASPR 157 (499)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEEC-CSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEEC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe-cCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCC
Confidence 0001111 0011345667899999997 8888 87 23345556776 7999999999999999
Q ss_pred cCCCCCCCC--cEEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHH
Q psy2951 1176 TISQADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERI 1253 (1466)
Q Consensus 1176 ~~~~~~g~~--~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l 1253 (1466)
.|+++ |.+ +++.. +++..+. ..+++++|||+|++|+|+|..+++.|.+|+++++.+++++ .+++++.+.+
T Consensus 158 ~p~i~-g~~~~~v~~~---~~~~~~~---~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-~~d~~~~~~l 229 (499)
T 1xdi_A 158 ILPSA-QPDGERILTW---RQLYDLD---ALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP-YEDADAALVL 229 (499)
T ss_dssp CCGGG-CCCSSSEEEG---GGGGGCS---SCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC-CSSHHHHHHH
T ss_pred CCCCC-CCCcCcEEeh---hHhhhhh---ccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc-ccCHHHHHHH
Confidence 99888 876 45543 3443332 2468999999999999999999999999999999998887 4899999999
Q ss_pred HHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCccc--cccCCceeeCCCeEEeCCCccc
Q psy2951 1254 TKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLET 1331 (1466)
Q Consensus 1254 ~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~~~G~i~vd~~~~t 1331 (1466)
.+.++++||+++++++|++++ .+++. ..+.+.+|+++++|.||+|+|..|++++ ++.+|+.++.+|+|.||+++||
T Consensus 230 ~~~l~~~GV~i~~~~~V~~i~-~~~~~-v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~t 307 (499)
T 1xdi_A 230 EESFAERGVRLFKNARAASVT-RTGAG-VLVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRT 307 (499)
T ss_dssp HHHHHHTTCEEETTCCEEEEE-ECSSS-EEEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSSBC
T ss_pred HHHHHHCCCEEEeCCEEEEEE-EeCCE-EEEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCccc
Confidence 999999999999999999998 34333 3577888999999999999999999998 7888999998899999999999
Q ss_pred cCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCC-CC--CCCCCccceeccccccEEEEeeCC-----
Q psy2951 1332 NVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEK-KT--SLSTIPFFWTMLFGVGFRFAGYAA----- 1403 (1466)
Q Consensus 1332 ~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~-~~--~~~~~p~~w~~~~~~~~~~~g~~~----- 1403 (1466)
+.|+|||+|||+..+.. ++.|..||++||.||+|. .. .|..+|++| .++..+..+|..+
T Consensus 308 ~~~~IyA~GD~~~~~~l-----------~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~--~~~~~~a~vG~~e~~a~~ 374 (499)
T 1xdi_A 308 LATGIYAAGDCTGLLPL-----------ASVAAMQGRIAMYHALGEGVSPIRLRTVAATV--FTRPEIAAVGVPQSVIDA 374 (499)
T ss_dssp SSTTEEECSGGGTSCSC-----------HHHHHHHHHHHHHHHTTCCCCCCCGGGCEEEE--CSSSEEEEEESCHHHHHH
T ss_pred CCCCEEEEeccCCCccc-----------HHHHHHHHHHHHHHhcCCCCccCCCCCCcEEE--EecCCceEeCCCHHHHHh
Confidence 99999999999986543 378999999999999997 33 355677664 4568888999753
Q ss_pred -CCceEEE------------cCCcCCceEEEEEEe--CCEEEEEEEecCcHH--HHHHHHHHHcCCCCChhcc
Q psy2951 1404 -GHTQVDI------------VGDLEALKFTAYYSN--ADKVLAILTVGMDPL--AAQFAERIKMQKYIQKDQI 1459 (1466)
Q Consensus 1404 -~~~~~~~------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 1459 (1466)
+.+-.+. .+ +...|++++++ +++|+|+..+|.... +..+.-+|+.+. +.++|
T Consensus 375 ~g~~~~~~~~~~~~~~~~~~~~--~~~g~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~--~~~~l 443 (499)
T 1xdi_A 375 GSVAARTIMLPLRTNARAKMSE--MRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRI--TVNEL 443 (499)
T ss_dssp TSSCEEEEEEESTTSHHHHHTT--CSSCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTC--BHHHH
T ss_pred CCCCEEEEEEecCcccceeecC--CCceEEEEEEECCCCEEEEEEEECCchHHHHHHHHHHHHCCC--CHHHH
Confidence 2221111 12 24568888886 589999999999643 466666777773 44444
No 64
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-35 Score=360.84 Aligned_cols=348 Identities=17% Similarity=0.251 Sum_probs=263.5
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCc----c----------------chhcc---------
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK----L----------------SKQLD--------- 644 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~----~----------------~~~~~--------- 644 (1466)
..+||+||||||||++||..|++.|++ |+++|++. +++.... . ...+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~--V~liE~~~-~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 86 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAK--TLLVEAKA-LGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDK 86 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCC--EEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCc--EEEEeCCC-cCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccc
Confidence 358999999999999999999999988 88888863 2211000 0 00000
Q ss_pred ----cCccccc-----------ccCHhHhhhCCcEEEEceEEEEeccccccEEEccCCC--EEecCEEEEcCCCCCCcC-
Q psy2951 645 ----IKADSIL-----------LRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGT--SIDFTKIYLATGSSPRTI- 706 (1466)
Q Consensus 645 ----~~~~~~~-----------~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~v~~~~~~--~~~~d~lviAtG~~~~~~- 706 (1466)
.+...+. ..+...+++.+++++.++ +..+ +.....+.+.+++ ++.||+||||||++|..|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i-~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~ 164 (479)
T 2hqm_A 87 EHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGW-ARFN-KDGNVEVQKRDNTTEVYSANHILVATGGKAIFPE 164 (479)
T ss_dssp GGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-EEEC-TTSCEEEEESSSCCEEEEEEEEEECCCEEECCCT
T ss_pred ccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe-eCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCC
Confidence 0001111 112234567899999997 7777 7666677766776 899999999999999999
Q ss_pred CCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHH
Q psy2951 707 SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLF 786 (1466)
Q Consensus 707 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l 786 (1466)
+++ |.+.+ .+.++...+. ..+++++|||+|++|+|+|..|++.|.+|+++++.++++ +.+++++.+.+.+.+
T Consensus 165 ~i~-g~~~~---~~~~~~~~l~---~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-~~~d~~~~~~l~~~l 236 (479)
T 2hqm_A 165 NIP-GFELG---TDSDGFFRLE---EQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL-RKFDECIQNTITDHY 236 (479)
T ss_dssp TST-TGGGS---BCHHHHHHCS---SCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC-TTSCHHHHHHHHHHH
T ss_pred CCC-Ccccc---cchHHHhccc---ccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc-cccCHHHHHHHHHHH
Confidence 888 87532 2445554433 358999999999999999999999999999999998877 578999999999999
Q ss_pred HhcCcEEEccceEEEEEecCCCceEEEECCCC-cEEecCEEEEccccccCccc-cccCCceeeCCCcEEeCCCCCCCCCC
Q psy2951 787 ESKGVKFVMKANVSSFEKNEKNDVTAANLDNG-TTIPADLVIVGIGTVLNTNY-LDGKGVELNGQKAVVVNEYLETNVPG 864 (1466)
Q Consensus 787 ~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g-~~i~~D~vi~a~G~~p~~~~-~~~~gl~~~~~G~i~vd~~~~t~~~~ 864 (1466)
++.||++++++++++++..+++.+..+.+++| +++++|.||+|+|++|++.| ++..|++++++|+|.||++++|+.|+
T Consensus 237 ~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~ 316 (479)
T 2hqm_A 237 VKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGIKLNSHDQIIADEYQNTNVPN 316 (479)
T ss_dssp HHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGGGTCCBCTTSCBCCCTTCBCSSTT
T ss_pred HhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhhcCceECCCCCEeECCCCccCCCC
Confidence 99999999999999998543443456788888 78999999999999999977 78899999999999999999999999
Q ss_pred eEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCCC------cCcccCeeeeeecCceeEEeeccCCC----
Q psy2951 865 VYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT------SLSTIPFFWTMLFGVGFRFAGYAAGH---- 934 (1466)
Q Consensus 865 iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~~------~~~~~~~~~~~~~~~~~~~~g~~~~~---- 934 (1466)
|||+|||+..+. .++.|..||+.+|.||++... .+..+|++ .+++..+..+|+++..
T Consensus 317 IyA~GD~~~~~~-----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~--~~~~~~~~~vGl~e~~a~~~ 383 (479)
T 2hqm_A 317 IYSLGDVVGKVE-----------LTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSV--IFSHPEAGSIGISEKEAIEK 383 (479)
T ss_dssp EEECGGGTTSSC-----------CHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCEE--ECCSSCEEEEECCHHHHHHH
T ss_pred EEEEEecCCCcc-----------cHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCeE--EECCCCeEEEeCCHHHHHhc
Confidence 999999976432 457999999999999997541 23345532 2345667777866421
Q ss_pred ---CceeEec-----------ccccceEEEEEe--cCCeEEEEEeecCc
Q psy2951 935 ---TQVDIVG-----------DLEALKFTAYYS--NADKVLAILTVGMD 967 (1466)
Q Consensus 935 ---~~~~~~~-----------~~~~~~~~~~~~--~~~~i~g~~~~g~~ 967 (1466)
....... ..++..|.|+++ ++++++|++++|..
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~ 432 (479)
T 2hqm_A 384 YGKENIKVYNSKFTAMYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDS 432 (479)
T ss_dssp HCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTT
T ss_pred CCCCcEEEEEEeccHHHHHhhcCCCcEEEEEEEECCCCEEEEEEEECCC
Confidence 1111100 113457899988 46999999999986
No 65
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1e-34 Score=358.40 Aligned_cols=382 Identities=18% Similarity=0.234 Sum_probs=266.4
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCC--CCC-Cccch----------------hccc------Cc--
Q psy2951 43 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLP--YDR-VKLSK----------------QLDI------KA-- 95 (1466)
Q Consensus 43 ~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~--~~~-~~~~~----------------~~~~------~~-- 95 (1466)
++||+|||||+||++||..|++.|.++.|++.+. ... ... +..++ .+.. ..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~--~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 79 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR--LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPL 79 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS--TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC--cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHH
Confidence 4799999999999999999999999888866442 100 000 00000 0000 00
Q ss_pred ---------ccccccChhhhhcCCeEEEeCceEEEeccccccEEEecC-------------CcEEecCEEEEccCCCCCC
Q psy2951 96 ---------DSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQD-------------GTSIDFTKIYLATGSSPRT 153 (1466)
Q Consensus 96 ---------~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~-------------~~~~~~d~lviAtG~~~~~ 153 (1466)
..+...+...+++.+++++.++.+.. + .+++.+.+ +.++.||+||||||++|..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i--d--~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~ 155 (500)
T 1onf_A 80 LVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFL--S--ENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVF 155 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC------------------------------CBSSEEECCCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEe--e--CCEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCC
Confidence 11111233455678999999875432 2 24455533 5679999999999999985
Q ss_pred CCCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHH
Q psy2951 154 ISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKL 233 (1466)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~ 233 (1466)
++ +++.+.++ +.++...+.. +++++|||+|++|+|+|..|+++|.+||++++.+.++ +.+++++.+.+.+.
T Consensus 156 p~-i~G~~~~~---~~~~~~~~~~----~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-~~~d~~~~~~l~~~ 226 (500)
T 1onf_A 156 PP-VKGIENTI---SSDEFFNIKE----SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL-RKFDESVINVLEND 226 (500)
T ss_dssp CS-CTTGGGCE---EHHHHTTCCC----CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC-TTSCHHHHHHHHHH
T ss_pred CC-CCCCCccc---CHHHHhccCC----CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC-cccchhhHHHHHHH
Confidence 53 66654433 3344444332 6899999999999999999999999999999988777 57899999999999
Q ss_pred HHhCCcEEEcCceEEEEEecCCCCeEEEEcCCCcE-EeccEEEEeeccccCcc-c-cccCCceecCCccEEECCCCCcCC
Q psy2951 234 FESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTT-IPADLVIVGIGTVLNTN-Y-LDGKGVELNGQKAVVVNEYLETNV 310 (1466)
Q Consensus 234 l~~~GV~i~~~~~v~~i~~~~~~~~~~v~~~~g~~-i~~D~Vi~a~G~~p~~~-~-l~~~gl~~~~~g~i~vd~~~~t~~ 310 (1466)
++++||+++++++|++++.++++. ..+.+++|++ +++|.||+|+|++||++ + ++..|+++ ++|+|.||+++||+.
T Consensus 227 l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~-~~G~i~vd~~~~t~~ 304 (500)
T 1onf_A 227 MKKNNINIVTFADVVEIKKVSDKN-LSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVET-NNNYIVVDENQRTSV 304 (500)
T ss_dssp HHHTTCEEECSCCEEEEEESSTTC-EEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCB-SSSCEEECTTCBCSS
T ss_pred HHhCCCEEEECCEEEEEEEcCCce-EEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccc-cCCEEEECCCcccCC
Confidence 999999999999999998754332 4567778887 99999999999999996 5 68889998 789999999999999
Q ss_pred CCEEEecccccccCcc-----------------------CCCCcceeccHHHHHHHHHHHHHHhcCCC---CCCCCCCcc
Q psy2951 311 PGVYAGGDIAYAPLHS-----------------------FYNKNASIGHYQLAQYHGRIAALNMVEKK---TSLSTIPFF 364 (1466)
Q Consensus 311 ~~iya~GD~~~~~~~~-----------------------~~g~~~~~~~~~~A~~~g~~aa~~i~~~~---~~~~~~p~~ 364 (1466)
|+|||+|||+..+... ..+....+..+..|..||+.+|+||++.. ..+..+|+.
T Consensus 305 ~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~ 384 (500)
T 1onf_A 305 NNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKTRKTNYKLIPTV 384 (500)
T ss_dssp SSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHSCTTCCCCCSSCCEE
T ss_pred CCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCCCccCCCCCCCeE
Confidence 9999999999432100 00000246788899999999999999753 235556632
Q ss_pred cccccceeeEEEEeecCC-------ceEEEe---------------cccCCCeEEEEEEc--CCEEEEEEEECC--CHHH
Q psy2951 365 WTMLFGVGFRFAGYAAGH-------TQVDIV---------------GDLEALKFTAYYSN--ADKVLAILTVGM--DPLA 418 (1466)
Q Consensus 365 ~s~~~~~~~~~~G~~~~~-------~~~~~~---------------g~~~~~~~~~~~~~--~~~i~g~~~~~~--~~~~ 418 (1466)
-.....+..+|..... ..+... ...+..+|.+++.+ +++|+|++++|. ++++
T Consensus 385 --~~~~~~~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i 462 (500)
T 1onf_A 385 --IFSHPPIGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIGLNADEIV 462 (500)
T ss_dssp --ECCSSCEEEEECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEEEEETTTTEEEEEEEESTTHHHHH
T ss_pred --EEcCcceEEEeCCHHHHHhcCCCccEEEEEEECchhhhhhccccccCCCceEEEEEEECCCCEEEEEEEECCCHHHHH
Confidence 1122335555654210 112110 11135678888885 589999999998 3456
Q ss_pred HHHHHHHhcCCCcc-----ccccCcccchhh
Q psy2951 419 AQFAEQVLEFPYSS-----LPHSHRCLGVVL 444 (1466)
Q Consensus 419 ~~~~~~~i~~~~~~-----~~~~~p~~~e~~ 444 (1466)
..++ .+|+++.+. +++.|||++|.+
T Consensus 463 ~~~~-~ai~~~~t~~~l~~~~~~~Pt~~e~~ 492 (500)
T 1onf_A 463 QGFA-VALKMNATKKDFDETIPIHPTAAEEF 492 (500)
T ss_dssp HHHH-HHHHTTCBHHHHHTSCCCTTCSTTHH
T ss_pred HHHH-HHHHcCCCHHHHhccccCCCCHHHHH
Confidence 6666 889999876 799999999988
No 66
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=2.6e-34 Score=356.56 Aligned_cols=376 Identities=22% Similarity=0.270 Sum_probs=277.4
Q ss_pred CCCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCC----CCccchhc-------------------c---cC
Q psy2951 41 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD----RVKLSKQL-------------------D---IK 94 (1466)
Q Consensus 41 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~----~~~~~~~~-------------------~---~~ 94 (1466)
+.++||+|||||+||++||..|++.|.++.|++.+.. .... .+..++.+ . ..
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~--~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 118 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPF--LGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEK 118 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS--SSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC--CCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhh
Confidence 4568999999999999999999999998877654331 1100 00000000 0 00
Q ss_pred ---ccccccc----Ch---hhh-----hcCCeEEE-eCceEEEeccccccEEEecCCcEEecCEEEEccCCCCCCCCCCC
Q psy2951 95 ---ADSILLR----TE---EFY-----KDNDIHVI-KGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQAD 158 (1466)
Q Consensus 95 ---~~~~~~~----~~---~~~-----~~~~v~~~-~~~~v~~~~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~ 158 (1466)
.+++..+ .. .++ ++.+++++ .+.....+ .+++.+. +..+.||+||+|||++|..++ ++
T Consensus 119 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~----~~~v~~~-g~~~~~d~lViATGs~p~~p~-i~ 192 (523)
T 1mo9_A 119 VVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVID----NHTVEAA-GKVFKAKNLILAVGAGPGTLD-VP 192 (523)
T ss_dssp CCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEE----TTEEEET-TEEEEBSCEEECCCEECCCCC-ST
T ss_pred hhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEee----CCEEEEC-CEEEEeCEEEECCCCCCCCCC-CC
Confidence 1111111 23 455 77899998 66544332 2567765 678999999999999998654 55
Q ss_pred CCCc--EEEecCHHHHH-hhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHH
Q psy2951 159 GVNK--VFYLRTVEDAN-NIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFE 235 (1466)
Q Consensus 159 ~~~~--~~~~~~~~~~~-~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~ 235 (1466)
+.+. ++ +..+.. .+.. .++++++|||+|++|+|+|..+++.|.+|+++++.+.+++ .+++++.+.+.+.++
T Consensus 193 G~~~~~v~---~~~~~~~~l~~--~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~ 266 (523)
T 1mo9_A 193 GVNAKGVF---DHATLVEELDY--EPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKL-IKDNETRAYVLDRMK 266 (523)
T ss_dssp TTTSBTEE---EHHHHHHHCCS--CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-CCSHHHHHHHHHHHH
T ss_pred CcccCcEe---eHHHHHHHHHh--cCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccc-cccHHHHHHHHHHHH
Confidence 5433 44 334444 4332 2448999999999999999999999999999999887664 578999999999999
Q ss_pred hCCcEEEcCceEEEEEecCCCCe--EEEEcCCCc-EEeccEEEEeeccccCcc-ccccCCceecCCccEEECCCCCcCCC
Q psy2951 236 SKGVKFVMKANVSSFEKNEKNDV--TAANLDNGT-TIPADLVIVGIGTVLNTN-YLDGKGVELNGQKAVVVNEYLETNVP 311 (1466)
Q Consensus 236 ~~GV~i~~~~~v~~i~~~~~~~~--~~v~~~~g~-~i~~D~Vi~a~G~~p~~~-~l~~~gl~~~~~g~i~vd~~~~t~~~ 311 (1466)
+.||+++++++|++++.++++++ ..+.+++|+ ++++|.||+|+|++|+++ +++..|++++++|+|.||+++||+.|
T Consensus 267 ~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~Vd~~~~t~~~ 346 (523)
T 1mo9_A 267 EQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYLQTSVP 346 (523)
T ss_dssp HTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCCCTTSBCSST
T ss_pred hCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEECCCCccCCC
Confidence 99999999999999987544433 456777887 899999999999999998 78888999988899999999999999
Q ss_pred CEEEecccccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCCCC--CCCCCcccccccceeeEEEEeecCC-----ce
Q psy2951 312 GVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS--LSTIPFFWTMLFGVGFRFAGYAAGH-----TQ 384 (1466)
Q Consensus 312 ~iya~GD~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~~~--~~~~p~~~s~~~~~~~~~~G~~~~~-----~~ 384 (1466)
+|||+|||++.+ ..+..|..||+.+|.||++.... +..+|+.+.. ...+.++|..... .+
T Consensus 347 ~IyA~GD~~~~~-----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~--~~~~a~vG~~e~~a~~~g~~ 413 (523)
T 1mo9_A 347 NVYAVGDLIGGP-----------MEMFKARKSGCYAARNVMGEKISYTPKNYPDFLHT--HYEVSFLGMGEEEARAAGHE 413 (523)
T ss_dssp TEEECGGGGCSS-----------CSHHHHHHHHHHHHHHHTTCCCCCCCCSCCEEEES--SSEEEEEECCHHHHHHTTCC
T ss_pred CEEEEeecCCCc-----------ccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEC--CCceEEEeCCHHHHHhCCCC
Confidence 999999999754 34567999999999999986543 5667765432 2345666654311 11
Q ss_pred EEEe----cc-----------------------cCCCeEEEEEEc--CCEEEEEEEECC-C-HHHHHHHHHHhcCCCcc-
Q psy2951 385 VDIV----GD-----------------------LEALKFTAYYSN--ADKVLAILTVGM-D-PLAAQFAEQVLEFPYSS- 432 (1466)
Q Consensus 385 ~~~~----g~-----------------------~~~~~~~~~~~~--~~~i~g~~~~~~-~-~~~~~~~~~~i~~~~~~- 432 (1466)
+... .+ .+..+|.+++.+ +++|+|++++|. + +++..++ .+|+.+.+.
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~-~ai~~~~t~~ 492 (523)
T 1mo9_A 414 IVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLN-VLIKQGLTVD 492 (523)
T ss_dssp EEEEEESCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEEEEEETTTCBEEEEEEEESSCHHHHHHHH-HHHHTTCBHH
T ss_pred EEEEEEecccccccccccccccccccceEEeecCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCCHH
Confidence 1110 01 234679998886 589999999998 3 3555555 999999876
Q ss_pred ----c--cccCcccchhh
Q psy2951 433 ----L--PHSHRCLGVVL 444 (1466)
Q Consensus 433 ----~--~~~~p~~~e~~ 444 (1466)
+ ++.|||++|.+
T Consensus 493 ~l~~~~~~~~~Pt~~e~~ 510 (523)
T 1mo9_A 493 ELGDMDELFLNPTHFIQL 510 (523)
T ss_dssp HHHTSCCCSSCSCCHHHH
T ss_pred HHHhCCcceECCCHHHHH
Confidence 6 99999999988
No 67
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.7e-35 Score=360.67 Aligned_cols=367 Identities=23% Similarity=0.332 Sum_probs=276.0
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCC----Cchhhc-----------------c-------
Q psy2951 1065 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK----LSKQLD-----------------I------- 1116 (1466)
Q Consensus 1065 ~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~----l~~~~~-----------------~------- 1116 (1466)
.+++|+|||||+||+++|..|++.|. +|+|||+++.++..... .++.+. .
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~--~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 82 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGF--KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEI 82 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTC--CEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCC--eEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCcc
Confidence 35789999999999999999999998 99999998765432100 011000 0
Q ss_pred Ccccccc-----------cChhhhccCCcEEEcCCeEEEeecCCCCeEEecCC--cEEecCeEEEecCCCCCcCCCCCCC
Q psy2951 1117 KADSILL-----------RTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDG--TSIDFTKIYLATGSSPRTISQADGV 1183 (1466)
Q Consensus 1117 ~~~~~~~-----------~~~~~~~~~~v~~~~~~~v~~i~d~~~~~v~~~~g--~~~~yd~lvlAtG~~~~~~~~~~g~ 1183 (1466)
....+.. ...+++++.+++++.++ +..+ +.....|.+.+| .++.||+||+|||++|+.|+++ |.
T Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~-~~~~-~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~~-g~ 159 (470)
T 1dxl_A 83 DLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGY-GKFV-SPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGV-TI 159 (470)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESC-EEEE-ETTEEEECCSSSCCEEEECSEEEECCCEEECCBTTB-CC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe-cCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCCC-CC
Confidence 0000000 01234556689999998 4458 776555666677 6899999999999999999888 76
Q ss_pred C--cEEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCC
Q psy2951 1184 N--KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKG 1261 (1466)
Q Consensus 1184 ~--~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~g 1261 (1466)
+ +++ +.+++..+. ..+++++|||+|++|+|+|..|++.|.+|+++++.+.+++ .+++++.+.+.+.+++.|
T Consensus 160 ~~~~v~---~~~~~~~~~---~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~-~~~~~~~~~l~~~l~~~g 232 (470)
T 1dxl_A 160 DEKKIV---SSTGALALS---EIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP-TMDAEIRKQFQRSLEKQG 232 (470)
T ss_dssp CSSSEE---CHHHHTTCS---SCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHSS
T ss_pred CcccEE---eHHHhhhhh---hcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-cccHHHHHHHHHHHHHcC
Confidence 6 333 455654433 2479999999999999999999999999999999998886 688999999999999999
Q ss_pred cEEEcCceEEEEEecCCCcEEEEEcC---CC--CeeecCEEEEeeccccCccc--cccCCceeeCCCeEEeCCCccccCC
Q psy2951 1262 VKFVMKANVSSFEKNEKNDVTAANLD---NG--TTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVP 1334 (1466)
Q Consensus 1262 v~~~~~~~v~~i~~~~~g~~~~v~l~---~g--~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~~~G~i~vd~~~~t~~~ 1334 (1466)
|+++++++|++++ .+++. ..+.+. +| +++++|.||+|+|..|++++ ++..|+.++.+|+|.||+++||+.|
T Consensus 233 v~i~~~~~v~~i~-~~~~~-~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~ 310 (470)
T 1dxl_A 233 MKFKLKTKVVGVD-TSGDG-VKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNVS 310 (470)
T ss_dssp CCEECSEEEEEEE-CSSSS-EEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBCSST
T ss_pred CEEEeCCEEEEEE-EcCCe-EEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCccCCC
Confidence 9999999999998 33333 335553 45 68999999999999999997 7888999988889999999999999
Q ss_pred CEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCCCC--CCCCccceeccccccEEEEeeCC-----CCce
Q psy2951 1335 GVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS--LSTIPFFWTMLFGVGFRFAGYAA-----GHTQ 1407 (1466)
Q Consensus 1335 ~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~~--~~~~p~~w~~~~~~~~~~~g~~~-----~~~~ 1407 (1466)
+|||+|||+..|.. ++.|..||+.||.||+|...+ |..+|+ ...++..+-.+|..+ ...+
T Consensus 311 ~Iya~GD~~~~~~~-----------~~~A~~~g~~aa~~i~g~~~~~~~~~~p~--~~~~~~~~a~vG~~e~~a~~~g~~ 377 (470)
T 1dxl_A 311 GVYAIGDVIPGPML-----------AHKAEEDGVACVEYLAGKVGHVDYDKVPG--VVYTNPEVASVGKTEEQVKETGVE 377 (470)
T ss_dssp TEEECSTTSSSCCC-----------HHHHHHHHHHHHHHHTTSCCCCCTTSCCE--EECSSSEEEEEECCHHHHHHTTCC
T ss_pred CEEEEeccCCCCcc-----------HHHHHHHHHHHHHHHcCCCcCCCCCCCCE--EEECCCceEEEcCCHHHHHhcCCc
Confidence 99999999986543 378999999999999997655 445664 445567788888752 1112
Q ss_pred EEEcC-----------CcCCceEEEEEEe--CCEEEEEEEecCc--HHHHHHHHHHHcCCCCChhccc
Q psy2951 1408 VDIVG-----------DLEALKFTAYYSN--ADKVLAILTVGMD--PLAAQFAERIKMQKYIQKDQIE 1460 (1466)
Q Consensus 1408 ~~~~~-----------~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 1460 (1466)
+.+-. .-++..|++++++ +++|+|+..+|.. ..+..+.-+|+.+ ++.++|+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~--~~~~~l~ 443 (470)
T 1dxl_A 378 YRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYD--ASSEDIA 443 (470)
T ss_dssp EEEEEEEGGGCHHHHHHSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTT--CBHHHHH
T ss_pred EEEEEEecccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC--CCHHHHh
Confidence 22210 0124568888885 7899999999997 3456666677777 3445553
No 68
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=3.1e-34 Score=352.41 Aligned_cols=376 Identities=22% Similarity=0.302 Sum_probs=274.6
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCC-------------------------CCCCCC-CCccchhcccCc
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDE-------------------------NFLPYD-RVKLSKQLDIKA 95 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~-------------------------~~~~~~-~~~~~~~~~~~~ 95 (1466)
.++||+|||||+||++||.+|++.|.++.|++.+.- ...++. ..... ......
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~-~~~~~~ 81 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAAT-VPTIDR 81 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCC-CCCCCH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCC-CCccCH
Confidence 368999999999999999999999998777654310 001111 00000 000000
Q ss_pred cccc------------ccChhhhhcC-CeEEEeCceEEEeccccccEEEecCC--cEEecCEEEEccCCCCCCCCCCCCC
Q psy2951 96 DSIL------------LRTEEFYKDN-DIHVIKGKKIISDSELNEKKIKLQDG--TSIDFTKIYLATGSSPRTISQADGV 160 (1466)
Q Consensus 96 ~~~~------------~~~~~~~~~~-~v~~~~~~~v~~~~~~~~~~v~~~~~--~~~~~d~lviAtG~~~~~~~~~~~~ 160 (1466)
..+. ..+.+++++. +++++.++.... +....++.+.++ ..+.||+||+|||++|+.++ +++.
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~--~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~-i~G~ 158 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFK--DDQSLTVRLNEGGERVVMFDRCLVATGASPAVPP-IPGL 158 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEE--ETTEEEEEETTSSEEEEECSEEEECCCEEECCCC-CTTT
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEc--cCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCC-CCCC
Confidence 1110 0234566677 999998874433 444566666677 67999999999999988554 5554
Q ss_pred CcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHHhCCcE
Q psy2951 161 NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVK 240 (1466)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~ 240 (1466)
+... +.+..+...+.. .+++++|||+|++|+|+|..+++.|.+|+++++.+.+++ +++++.+.+.+.+++.||+
T Consensus 159 ~~~~-~~~~~~~~~~~~---~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~~~l~~~Gv~ 232 (467)
T 1zk7_A 159 KESP-YWTSTEALASDT---IPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR--EDPAIGEAVTAAFRAEGIE 232 (467)
T ss_dssp TTSC-CBCHHHHHHCSS---CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT--SCHHHHHHHHHHHHHTTCE
T ss_pred CcCc-eecHHHHhcccc---cCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC--CCHHHHHHHHHHHHhCCCE
Confidence 4321 225555555432 468999999999999999999999999999999987775 7899999999999999999
Q ss_pred EEcCceEEEEEecCCCCeEEEEcCCCcEEeccEEEEeeccccCccc--cccCCceecCCccEEECCCCCcCCCCEEEecc
Q psy2951 241 FVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 318 (1466)
Q Consensus 241 i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~t~~~~iya~GD 318 (1466)
++++++|++++.++ ....+.++ +.++++|.||+|+|+.|++++ ++..+++++++|+|.||++++|+.|+|||+||
T Consensus 233 i~~~~~v~~i~~~~--~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD 309 (467)
T 1zk7_A 233 VLEHTQASQVAHMD--GEFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAAGD 309 (467)
T ss_dssp EETTCCEEEEEEET--TEEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEECST
T ss_pred EEcCCEEEEEEEeC--CEEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCcccCCCCEEEEec
Confidence 99999999998653 23345555 568999999999999999885 56788999888999999999999999999999
Q ss_pred cccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCCC--CCCCCCcccccccceeeEEEEeecCC-----ceEEEe---
Q psy2951 319 IAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT--SLSTIPFFWTMLFGVGFRFAGYAAGH-----TQVDIV--- 388 (1466)
Q Consensus 319 ~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~~--~~~~~p~~~s~~~~~~~~~~G~~~~~-----~~~~~~--- 388 (1466)
|+..+ ..+..|..||+.+|.||++... ++..+|+. ......+.++|..... .++...
T Consensus 310 ~~~~~-----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~--~~~~~~~a~vG~~~~~a~~~g~~~~~~~~~ 376 (467)
T 1zk7_A 310 CTDQP-----------QFVYVAAAAGTRAAINMTGGDAALDLTAMPAV--VFTDPQVATVGYSEAEAHHDGIETDSRTLT 376 (467)
T ss_dssp TBSSC-----------CCHHHHHHHHHHHHHHHTTCCCCCCCTTCEEE--ECSSSEEEEEECCHHHHHHTTCCEEEEEEE
T ss_pred cCCCc-----------ccHHHHHHHHHHHHHHHcCCCcccCCCCCCEE--EecCCceEEEecCHHHHHhcCCCeEEEEEe
Confidence 98754 3466899999999999997643 34455533 2223356667764321 111111
Q ss_pred ----c----ccCCCeEEEEEEc--CCEEEEEEEECCC--HHHHHHHHHHhcCCCcc-----ccccCcccchhh
Q psy2951 389 ----G----DLEALKFTAYYSN--ADKVLAILTVGMD--PLAAQFAEQVLEFPYSS-----LPHSHRCLGVVL 444 (1466)
Q Consensus 389 ----g----~~~~~~~~~~~~~--~~~i~g~~~~~~~--~~~~~~~~~~i~~~~~~-----~~~~~p~~~e~~ 444 (1466)
+ ..+..+|.+++.+ +++|+|++++|.. .+++.++ .+|+.+.+. +.++|||++|.+
T Consensus 377 ~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~~~i~~~~-~~i~~~~~~~~l~~~~~~~pt~~e~~ 448 (467)
T 1zk7_A 377 LDNVPRALANFDTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAA-LAIRNRMTVQELADQLFPYLTMVEGL 448 (467)
T ss_dssp GGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHH-HHHHTTCBHHHHHTSCCCTTSTTHHH
T ss_pred cccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCCHHHHhcCccCCCCHHHHH
Confidence 0 1235789999887 6999999999983 4555555 899999876 799999999998
No 69
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=9.1e-35 Score=355.10 Aligned_cols=369 Identities=22% Similarity=0.277 Sum_probs=270.2
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCC---C-Cccchh-------------------ccc-----
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD---R-VKLSKQ-------------------LDI----- 93 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~---~-~~~~~~-------------------~~~----- 93 (1466)
.++||+||||||||++||..|++.|.++.|++ ++.. ... . +..++. +..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie--~~~~-GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~ 80 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVE--GQAL-GGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASP 80 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEEC--SSCT-THHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEc--cCCC-CCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCC
Confidence 35899999999999999999999999877764 3221 000 0 000000 000
Q ss_pred --Ccccccc-----------cChhhhhcCCeEEEeCceEEEeccccccEEEecCCcEEecCEEEEccCCCCCCCCCCCCC
Q psy2951 94 --KADSILL-----------RTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGV 160 (1466)
Q Consensus 94 --~~~~~~~-----------~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~~~ 160 (1466)
+..++.. ....++++.+++++.++.+..+ .+++.+++ .++.||+||||||++|+.+|.++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~----~~~v~v~~-~~~~~d~lviATGs~p~~~~~~~~~ 155 (458)
T 1lvl_A 81 RLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLD----GKQVEVDG-QRIQCEHLLLATGSSSVELPMLPLG 155 (458)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEE----TTEEEETT-EEEECSEEEECCCEEECCBTTBCCB
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEcc----CCEEEEee-EEEEeCEEEEeCCCCCCCCCCCCcc
Confidence 1111111 1235667889999999987642 36777766 7899999999999999866544432
Q ss_pred CcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHHhCCcE
Q psy2951 161 NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVK 240 (1466)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~ 240 (1466)
.. +.+..+...+.. .+++++|||+|++|+|+|..|++.|.+|+++++.+.+++ .+++++.+.+.+.+++.||+
T Consensus 156 ~~---v~~~~~~~~~~~---~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gv~ 228 (458)
T 1lvl_A 156 GP---VISSTEALAPKA---LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP-TYDSELTAPVAESLKKLGIA 228 (458)
T ss_dssp TT---EECHHHHTCCSS---CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHTCE
T ss_pred Cc---EecHHHHhhhhc---cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHHCCCE
Confidence 22 235566554432 468999999999999999999999999999999988774 78899999999999999999
Q ss_pred EEcCceEEEEEecCCCCeEEEEcCCC--cEEeccEEEEeeccccCccc--cccCCceecCCccEEECCCCCcCCCCEEEe
Q psy2951 241 FVMKANVSSFEKNEKNDVTAANLDNG--TTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAG 316 (1466)
Q Consensus 241 i~~~~~v~~i~~~~~~~~~~v~~~~g--~~i~~D~Vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~t~~~~iya~ 316 (1466)
++++++|++++. + .+ .+...+| +++++|.||+|+|++|++++ ++..|++++++ +|.||++++|+.|+|||+
T Consensus 229 i~~~~~v~~i~~-~--~v-~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd~~~~t~~~~Iya~ 303 (458)
T 1lvl_A 229 LHLGHSVEGYEN-G--CL-LANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAIDERCQTSMHNVWAI 303 (458)
T ss_dssp EETTCEEEEEET-T--EE-EEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCCTTCBCSSTTEEEC
T ss_pred EEECCEEEEEEe-C--CE-EEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeECCCCcCCCCCEEEe
Confidence 999999999986 3 23 3444456 68999999999999999986 57888998887 999999999999999999
Q ss_pred cccccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCCCC--CCCCCcccccccceeeEEEEeecC-----CceEEEe-
Q psy2951 317 GDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS--LSTIPFFWTMLFGVGFRFAGYAAG-----HTQVDIV- 388 (1466)
Q Consensus 317 GD~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~~~--~~~~p~~~s~~~~~~~~~~G~~~~-----~~~~~~~- 388 (1466)
|||+..+ ..+..|..||+.+|.||.+.... +..+|+. ...+..+..+|.... ..++...
T Consensus 304 GD~~~~~-----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~--~~~~p~~a~vG~~e~~a~~~g~~~~~~~ 370 (458)
T 1lvl_A 304 GDVAGEP-----------MLAHRAMAQGEMVAEIIAGKARRFEPAAIAAV--CFTDPEVVVVGKTPEQASQQGLDCIVAQ 370 (458)
T ss_dssp GGGGCSS-----------CCHHHHHHHHHHHHHHHTTCCCCCCCSCCCEE--ECSSSEEEEEECCHHHHHHTTCCEEEEE
T ss_pred eccCCCc-----------ccHHHHHHHHHHHHHHhcCCCccCCCCCCCEE--EECCCCeEEEeCCHHHHHHcCCCEEEEE
Confidence 9998754 34668999999999999985443 3445532 222223445554321 1111110
Q ss_pred ----------cccCCCeEEEEEEc--CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc-----ccccCcccchhh
Q psy2951 389 ----------GDLEALKFTAYYSN--ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS-----LPHSHRCLGVVL 444 (1466)
Q Consensus 389 ----------g~~~~~~~~~~~~~--~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~-----~~~~~p~~~e~~ 444 (1466)
...+..+|.+++.+ +++|+|++++|. ++++..++ .+|+.+.+. +++.|||++|.+
T Consensus 371 ~~~~~~~~~~~~~~~~g~~kl~~d~~~~~ilG~~~vg~~a~e~i~~~~-~ai~~~~~~~~l~~~~~~~Pt~~e~~ 444 (458)
T 1lvl_A 371 FPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFA-QSLEMGACLEDVAGTIHAHPTLGEAV 444 (458)
T ss_dssp EEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTGGGHHHHHH-HHHHHTCBHHHHHTSCCCTTCTTHHH
T ss_pred EECccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCCHHHHhhCcCCCCCHHHHH
Confidence 01134689988885 589999999998 35666666 899988875 799999999988
No 70
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=4.9e-35 Score=359.16 Aligned_cols=363 Identities=23% Similarity=0.282 Sum_probs=274.7
Q ss_pred CcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCC---C-CCchhhc-----------------c------Ccc
Q psy2951 1067 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDR---V-KLSKQLD-----------------I------KAD 1119 (1466)
Q Consensus 1067 ~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~---~-~l~~~~~-----------------~------~~~ 1119 (1466)
++|+|||||+||+++|..|++.|. +|+|||++. .+... . ..++.+. . ...
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~~G~--~V~liE~~~-~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~ 80 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQLGL--STAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYG 80 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC--CEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCC--eEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHH
Confidence 589999999999999999999998 999999972 22000 0 0000000 0 000
Q ss_pred ccc-----------ccChhhhccCCcEEEcCCeEEEeecCCCCeEEecCC--cEEecCeEEEecCCCCCcCCCCCCCCcE
Q psy2951 1120 SIL-----------LRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDG--TSIDFTKIYLATGSSPRTISQADGVNKV 1186 (1466)
Q Consensus 1120 ~~~-----------~~~~~~~~~~~v~~~~~~~v~~i~d~~~~~v~~~~g--~~~~yd~lvlAtG~~~~~~~~~~g~~~v 1186 (1466)
.+. ....+++++.+++++.++.+ .+ +.....|.+.+| .++.||+||+|||+.|+.|+++ |.+..
T Consensus 81 ~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~-~i-d~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~~-g~~~~ 157 (464)
T 2a8x_A 81 IAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGT-FA-DANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGT-SLSAN 157 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEE-ES-SSSEEEEEETTSCCEEEEEEEEEECCCEEECCCTTC-CCBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-Ee-cCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCCCC-CCCce
Confidence 000 00123455679999998844 47 766556777777 6899999999999999998888 77632
Q ss_pred EEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEc
Q psy2951 1187 FYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVM 1266 (1466)
Q Consensus 1187 ~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~ 1266 (1466)
+.+.+++..+.+ .+++++|||+|++|+|+|..|++.|.+|+++++.+++++ .+++++.+.+.+.++++||++++
T Consensus 158 --~~~~~~~~~~~~---~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gv~i~~ 231 (464)
T 2a8x_A 158 --VVTYEEQILSRE---LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP-NEDADVSKEIEKQFKKLGVTILT 231 (464)
T ss_dssp --EECHHHHHTCSS---CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHTCEEEC
T ss_pred --EEecHHHhhccc---cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHHcCCEEEe
Confidence 335677755542 478999999999999999999999999999999998887 68899999999999999999999
Q ss_pred CceEEEEEecCCCcEEEEEcC-CC--CeeecCEEEEeeccccCccc--cccCCceeeCCCeEEeCCCccccCCCEEEecc
Q psy2951 1267 KANVSSFEKNEKNDVTAANLD-NG--TTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAGGD 1341 (1466)
Q Consensus 1267 ~~~v~~i~~~~~g~~~~v~l~-~g--~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD 1341 (1466)
+++|++++ .+++. ..+.+. +| +++++|.||+|+|..|++++ ++.+|+.++.+|+|.||+++||+.|+|||+||
T Consensus 232 ~~~v~~i~-~~~~~-~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD 309 (464)
T 2a8x_A 232 ATKVESIA-DGGSQ-VTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGHIYAIGD 309 (464)
T ss_dssp SCEEEEEE-ECSSC-EEEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBCSSTTEEECGG
T ss_pred CcEEEEEE-EcCCe-EEEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCccCCCCEEEeEC
Confidence 99999998 33333 345554 66 67999999999999999997 67889999888899999999999999999999
Q ss_pred cccCCCccCCCceeeeecHHHHHHHHHHHHHHhcC-CCCC---CCCCccceeccccccEEEEeeCC-----CCceEEE--
Q psy2951 1342 IAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVE-KKTS---LSTIPFFWTMLFGVGFRFAGYAA-----GHTQVDI-- 1410 (1466)
Q Consensus 1342 ~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g-~~~~---~~~~p~~w~~~~~~~~~~~g~~~-----~~~~~~~-- 1410 (1466)
|+..+.. ++.|..||+.||.||+| ...+ |..+|++ ..++..+-.+|..+ ...++.+
T Consensus 310 ~~~~~~~-----------~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~--~~~~~~~a~vG~~e~~a~~~g~~~~~~~ 376 (464)
T 2a8x_A 310 VNGLLQL-----------AHVAEAQGVVAAETIAGAETLTLGDHRMLPRA--TFCQPNVASFGLTEQQARNEGYDVVVAK 376 (464)
T ss_dssp GGCSSCS-----------HHHHHHHHHHHHHHHHTCCCCCCCCGGGSCEE--ECSSSEEEEEECCHHHHHHTTCCEEEEE
T ss_pred cCCCccC-----------HHHHHHHHHHHHHHhcCCCCcccCCCCCCCEE--EECCCCeEEEcCCHHHHHhcCCCEEEEE
Confidence 9986543 37899999999999999 5555 5567755 34457787788742 1112221
Q ss_pred -----------cCCcCCceEEEEEEe--CCEEEEEEEecCc--HHHHHHHHHHHcCCCCChhccc
Q psy2951 1411 -----------VGDLEALKFTAYYSN--ADKVLAILTVGMD--PLAAQFAERIKMQKYIQKDQIE 1460 (1466)
Q Consensus 1411 -----------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 1460 (1466)
.+ ++..|++++++ +++|+|+..+|.. ..+..+.-+|+.+. +.++|+
T Consensus 377 ~~~~~~~~~~~~~--~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~--~~~~l~ 437 (464)
T 2a8x_A 377 FPFTANAKAHGVG--DPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDL--TASELA 437 (464)
T ss_dssp EEGGGCHHHHHHT--CCCCEEEEEEETTTTEEEEEEEEETTGGGGHHHHHHHHHTTC--BHHHHT
T ss_pred EEcchhhhhhhcC--CCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCC--CHHHHh
Confidence 12 24568888885 7999999999996 44667777888774 455553
No 71
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=2.6e-35 Score=361.17 Aligned_cols=375 Identities=15% Similarity=0.226 Sum_probs=274.6
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCC----CCccchhc------------------ccCccc---
Q psy2951 43 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD----RVKLSKQL------------------DIKADS--- 97 (1466)
Q Consensus 43 ~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~----~~~~~~~~------------------~~~~~~--- 97 (1466)
++||+||||||||++||..|++.|.++.|++ +.+..... .+..++.+ ......
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liE--k~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~ 81 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMAD--PKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQD 81 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEC--TTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEE--CCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHH
Confidence 4899999999999999999999999877754 33222110 00000000 000000
Q ss_pred -------cc--ccChhhhhcCCeEEEeCceEEEeccccccEEEecCCcE--EecCEEEEccCCCCCCCCCCCCCCcEEEe
Q psy2951 98 -------IL--LRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTS--IDFTKIYLATGSSPRTISQADGVNKVFYL 166 (1466)
Q Consensus 98 -------~~--~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~~~~--~~~d~lviAtG~~~~~~~~~~~~~~~~~~ 166 (1466)
+. ..+..++++.+++++.++.... +....++...+++. +.||+||+|||++|+.++ +++.+. +
T Consensus 82 ~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~i--d~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~-i~G~~~---~ 155 (466)
T 3l8k_A 82 RKDYVQELRFKQHKRNMSQYETLTFYKGYVKIK--DPTHVIVKTDEGKEIEAETRYMIIASGAETAKLR-LPGVEY---C 155 (466)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEE--ETTEEEEEETTSCEEEEEEEEEEECCCEEECCCC-CTTGGG---S
T ss_pred HHHhheeccccchHHHHHHhCCCEEEEeEEEEe--cCCeEEEEcCCCcEEEEecCEEEECCCCCccCCC-CCCccc---e
Confidence 11 3344566778999999865443 45567777778878 999999999999988654 555553 3
Q ss_pred cCHHHHHhhcccC-CCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHHhCCcEEEcCc
Q psy2951 167 RTVEDANNIAPHI-TPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKA 245 (1466)
Q Consensus 167 ~~~~~~~~~~~~~-~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~ 245 (1466)
.+..+...+...+ ..+++++|||+|++|+|+|..+++.|.+|+++++.+.+++..+++++.+.+.+.++ |++++++
T Consensus 156 ~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~ 232 (466)
T 3l8k_A 156 LTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSILK---LNIKFNS 232 (466)
T ss_dssp BCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC---CCEECSC
T ss_pred EeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEECC
Confidence 4566666433322 24689999999999999999999999999999999887754448999998888876 9999999
Q ss_pred eEEEEEecCCCCeEEEEcC--CCc--EEeccEEEEeeccccCccc-cccCCceecCCccEEECCCCCcCCCCEEEecccc
Q psy2951 246 NVSSFEKNEKNDVTAANLD--NGT--TIPADLVIVGIGTVLNTNY-LDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 320 (1466)
Q Consensus 246 ~v~~i~~~~~~~~~~v~~~--~g~--~i~~D~Vi~a~G~~p~~~~-l~~~gl~~~~~g~i~vd~~~~t~~~~iya~GD~~ 320 (1466)
+|++++.++++.+ .+.++ +|+ ++++|.||+|+|++|++++ ++..|++++++| |.||+++||+.|+|||+|||+
T Consensus 233 ~v~~i~~~~~~~v-~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~~~~G-i~vd~~~~t~~~~Iya~GD~~ 310 (466)
T 3l8k_A 233 PVTEVKKIKDDEY-EVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGLSISKTG-IVVDETMKTNIPNVFATGDAN 310 (466)
T ss_dssp CEEEEEEEETTEE-EEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGGTCCBCSSS-BCCCTTCBCSSTTEEECGGGT
T ss_pred EEEEEEEcCCCcE-EEEEEecCCceEEEEcCEEEECcCCCcccccchhhcCceeCCCC-EeECCCccCCCCCEEEEEecC
Confidence 9999987531233 35555 565 8999999999999999986 788899999999 999999999999999999998
Q ss_pred cccCccCCCCcceeccHHHHHHHHHHHHHHhcCC--C---CCCCCCCcccccccceeeEEEEeecCC-----ceEEEe--
Q psy2951 321 YAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEK--K---TSLSTIPFFWTMLFGVGFRFAGYAAGH-----TQVDIV-- 388 (1466)
Q Consensus 321 ~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~--~---~~~~~~p~~~s~~~~~~~~~~G~~~~~-----~~~~~~-- 388 (1466)
..+ ..+..|..||+.+|.||++. . ..+..+|+ .-.....+..+|.+... .++...
T Consensus 311 ~~~-----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~--~~~~~~~~a~vG~te~~a~~~g~~~~~~~~ 377 (466)
T 3l8k_A 311 GLA-----------PYYHAAVRMSIAAANNIMANGMPVDYVDVKSIPV--TIYTIPSLSYVGILPSKARKMGIEIVEAEY 377 (466)
T ss_dssp CSC-----------CSHHHHHHHHHHHHHHHHTTTSCCCCCCSTTSCE--EECSSSCEEEEECCHHHHHHHTCCEEEEEE
T ss_pred CCC-----------ccHhHHHHHHHHHHHHHhCCCCCccccCCCCCcE--EEECCCCeEEecCCHHHHHhCCCCEEEEEE
Confidence 753 45678999999999999975 2 24455553 22223345556654321 111110
Q ss_pred ---c------ccCCCeEEEEEEcC--CEEEEEEEECC--CHHHHHHHHHHhcCCCcc-----ccccCcccchhh
Q psy2951 389 ---G------DLEALKFTAYYSNA--DKVLAILTVGM--DPLAAQFAEQVLEFPYSS-----LPHSHRCLGVVL 444 (1466)
Q Consensus 389 ---g------~~~~~~~~~~~~~~--~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~-----~~~~~p~~~e~~ 444 (1466)
. ..+..+|.+++.+. ++|+|++++|. ++++..++ .+|+++.+. +++.|||++|.+
T Consensus 378 ~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~-~ai~~~~t~~~l~~~~~~~Pt~~e~~ 450 (466)
T 3l8k_A 378 NMEEDVSAQIYGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELG-LAVAYGLNAKQLASFAEQHPSTNEII 450 (466)
T ss_dssp EGGGSHHHHHHTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHH-HHHHTTCBHHHHHHCCCCTTSTTHHH
T ss_pred EcccChhheecCCCeEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHCcCCHHHHhccccCCCChHHHH
Confidence 0 01357899998874 89999999998 45666666 999999886 799999999998
No 72
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=1.4e-34 Score=356.84 Aligned_cols=379 Identities=19% Similarity=0.243 Sum_probs=270.8
Q ss_pred CCCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCC-------CCCCC----Cccc----------------hhccc
Q psy2951 41 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENF-------LPYDR----VKLS----------------KQLDI 93 (1466)
Q Consensus 41 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~-------~~~~~----~~~~----------------~~~~~ 93 (1466)
+.++||+||||||||++||..|++.|+++.|++..+... +.... +..+ ..+..
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 86 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGW 86 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCc
Confidence 457899999999999999999999999988875311110 00000 0000 00000
Q ss_pred --------Cccccc-----------ccChhhhhcCCeEEEeCceEEEeccccccEEEecCCc-EEecCEEEEccCCCCCC
Q psy2951 94 --------KADSIL-----------LRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGT-SIDFTKIYLATGSSPRT 153 (1466)
Q Consensus 94 --------~~~~~~-----------~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~~~-~~~~d~lviAtG~~~~~ 153 (1466)
+...+. ......++..+++++.+...+. +.....+.+.++. ++.||+||||||++|+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~--~~~~v~v~~~~g~~~~~~d~lviATGs~p~~ 164 (483)
T 3dgh_A 87 NVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFV--DSHTLLAKLKSGERTITAQTFVIAVGGRPRY 164 (483)
T ss_dssp CCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEE--ETTEEEEECTTCCEEEEEEEEEECCCEEECC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEc--cCCEEEEEeCCCeEEEEcCEEEEeCCCCcCC
Confidence 001111 1122345677999999987654 3344556556664 79999999999999986
Q ss_pred CCCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHH
Q psy2951 154 ISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKL 233 (1466)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~ 233 (1466)
+ .+++.+.. ..+..+...+. ..+++++|||+|++|+|+|..+++.|.+|+++++. .. .+.+++++.+.+.+.
T Consensus 165 p-~i~G~~~~--~~~~~~~~~~~---~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~-l~~~d~~~~~~l~~~ 236 (483)
T 3dgh_A 165 P-DIPGAVEY--GITSDDLFSLD---REPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-IV-LRGFDQQMAELVAAS 236 (483)
T ss_dssp C-SSTTHHHH--CBCHHHHTTCS---SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-CS-STTSCHHHHHHHHHH
T ss_pred C-CCCCcccc--cCcHHHHhhhh---hcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC-CC-CcccCHHHHHHHHHH
Confidence 5 45554221 12445544433 24679999999999999999999999999999884 33 357789999999999
Q ss_pred HHhCCcEEEcCceEEEEEecCCCCeEEEEcCCCc-----EEeccEEEEeeccccCcccc--ccCCceecCCccEEECCCC
Q psy2951 234 FESKGVKFVMKANVSSFEKNEKNDVTAANLDNGT-----TIPADLVIVGIGTVLNTNYL--DGKGVELNGQKAVVVNEYL 306 (1466)
Q Consensus 234 l~~~GV~i~~~~~v~~i~~~~~~~~~~v~~~~g~-----~i~~D~Vi~a~G~~p~~~~l--~~~gl~~~~~g~i~vd~~~ 306 (1466)
++++||++++++.+++++..+++.+ .+.+.++. ++++|.||+|+|++|+++++ +..|+++++ |+|.||+++
T Consensus 237 l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd~~~ 314 (483)
T 3dgh_A 237 MEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQE 314 (483)
T ss_dssp HHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCCTTC
T ss_pred HHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEECcCC
Confidence 9999999999999999987544333 34444332 79999999999999999886 788999988 999999999
Q ss_pred CcCCCCEEEecccccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCCC---CCCCCCcccccccceeeEEEEeecCC-
Q psy2951 307 ETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT---SLSTIPFFWTMLFGVGFRFAGYAAGH- 382 (1466)
Q Consensus 307 ~t~~~~iya~GD~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~~---~~~~~p~~~s~~~~~~~~~~G~~~~~- 382 (1466)
+|+.|+|||+|||+... +..+..|..||+.+|+||++... .+..+|+.+-. ...+..+|.+...
T Consensus 315 ~t~~~~IyA~GD~~~~~----------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~--~p~~a~vGlte~~a 382 (483)
T 3dgh_A 315 ATNVANIYAVGDIIYGK----------PELTPVAVLAGRLLARRLYGGSTQRMDYKDVATTVFT--PLEYACVGLSEEDA 382 (483)
T ss_dssp BCSSTTEEECSTTBTTS----------CCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECS--SSEEEEEECCHHHH
T ss_pred ccCCCCEEEEEcccCCC----------CccHHHHHHHHHHHHHHHcCCCCCcCCCCCCCEEEEC--CCccEEEeCCHHHH
Confidence 99999999999998421 24567899999999999998643 45666743221 2234555654311
Q ss_pred ------ceEEE-----ec-------ccCCCeEEEEEEc---CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc-----cc
Q psy2951 383 ------TQVDI-----VG-------DLEALKFTAYYSN---ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS-----LP 434 (1466)
Q Consensus 383 ------~~~~~-----~g-------~~~~~~~~~~~~~---~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~-----~~ 434 (1466)
..+.. .. ..+..+|.+++.+ +++|+|++++|. +++++.++ .+|+++.+. ++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~-~ai~~~~t~~~l~~~~ 461 (483)
T 3dgh_A 383 VKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFA-AALKSGLTINTLINTV 461 (483)
T ss_dssp HHHHCGGGEEEEEEECCCGGGTTTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHH-HHHHTTCBHHHHHTSC
T ss_pred HhhCCCCCEEEEEEeecchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCCHHHHhhcc
Confidence 11111 10 0135689998876 389999999998 55677776 999999886 89
Q ss_pred ccCcccchhh
Q psy2951 435 HSHRCLGVVL 444 (1466)
Q Consensus 435 ~~~p~~~e~~ 444 (1466)
|+|||++|.+
T Consensus 462 ~~hPt~~e~~ 471 (483)
T 3dgh_A 462 GIHPTTAEEF 471 (483)
T ss_dssp CCSSCSGGGG
T ss_pred cCCCChHHHH
Confidence 9999999998
No 73
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=4.9e-35 Score=360.57 Aligned_cols=373 Identities=21% Similarity=0.244 Sum_probs=274.4
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCC----Cccch----------------hccc--------
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDR----VKLSK----------------QLDI-------- 93 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~~----~~~~~----------------~~~~-------- 93 (1466)
.++||+|||||+||++||+.|++.|++|.|++.+. ..... +..++ .+..
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~---~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 101 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEYR---IGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFN 101 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC---TTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCC---CCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccC
Confidence 46899999999999999999999999988876521 11000 00000 0000
Q ss_pred ----------CcccccccChhhhhcCCeEEEeCceEEEeccccccEEEec-CCcEEecCEEEEccCCCCCCCCCCCCCCc
Q psy2951 94 ----------KADSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQ-DGTSIDFTKIYLATGSSPRTISQADGVNK 162 (1466)
Q Consensus 94 ----------~~~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~-~~~~~~~d~lviAtG~~~~~~~~~~~~~~ 162 (1466)
....+...+...+++.+++++.+.....+ ..++.+. ++..+.||+||+|||++|...|.+++.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~----~~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~ 177 (484)
T 3o0h_A 102 WEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVD----EHTLELSVTGERISAEKILIATGAKIVSNSAIKGSDL 177 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEE----TTEEEETTTCCEEEEEEEEECCCEEECCC--CBTGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEee----CCEEEEecCCeEEEeCEEEEccCCCcccCCCCCCccc
Confidence 00112223345566789999999766543 3567776 77889999999999999873334555543
Q ss_pred EEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHHhCCcEEE
Q psy2951 163 VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFV 242 (1466)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~ 242 (1466)
++ +..+...+. ..+++++|||+|++|+|+|..+++.|.+|+++++.+.++ +.+++++.+.+.+.+++.||+++
T Consensus 178 ~~---~~~~~~~~~---~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-~~~~~~~~~~l~~~l~~~Gv~i~ 250 (484)
T 3o0h_A 178 CL---TSNEIFDLE---KLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL-RNFDYDLRQLLNDAMVAKGISII 250 (484)
T ss_dssp SB---CTTTGGGCS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-TTSCHHHHHHHHHHHHHHTCEEE
T ss_pred cc---cHHHHHhHH---hcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc-cccCHHHHHHHHHHHHHCCCEEE
Confidence 22 223332222 346899999999999999999999999999999988766 46789999999999999999999
Q ss_pred cCceEEEEEecCCCCeEEEEcCCCcEEeccEEEEeeccccCccc--cccCCceecCCccEEECCCCCcCCCCEEEecccc
Q psy2951 243 MKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 320 (1466)
Q Consensus 243 ~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~t~~~~iya~GD~~ 320 (1466)
++++|++++.++ +.+ .+.+.+|+++++|.||+|+|++|++.+ ++..|++++++|+|.||++++|+.|+|||+|||+
T Consensus 251 ~~~~V~~i~~~~-~~v-~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~ 328 (484)
T 3o0h_A 251 YEATVSQVQSTE-NCY-NVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDVT 328 (484)
T ss_dssp SSCCEEEEEECS-SSE-EEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGG
T ss_pred eCCEEEEEEeeC-CEE-EEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCCCCCCEEEEEecC
Confidence 999999998754 333 577888889999999999999999987 5778999999999999999999999999999998
Q ss_pred cccCccCCCCcceeccHHHHHHHHHHHHHHhcCCCC---CCCCCCcccccccceeeEEEEeecCC-----ceE-----EE
Q psy2951 321 YAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT---SLSTIPFFWTMLFGVGFRFAGYAAGH-----TQV-----DI 387 (1466)
Q Consensus 321 ~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~~---~~~~~p~~~s~~~~~~~~~~G~~~~~-----~~~-----~~ 387 (1466)
+.+ ..+..|..||+.+|.||++... .+..+|+.. .....+..+|.+... ..+ .+
T Consensus 329 ~~~-----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~--~~~p~~a~vGlte~~a~~~g~~~~~~~~~~ 395 (484)
T 3o0h_A 329 GHI-----------QLTPVAIHDAMCFVKNAFENTSTTPDYDLITTAV--FSQPEIGTVGLSEEDALHRYKRVEIYRTVF 395 (484)
T ss_dssp TSC-----------CCHHHHHHHHHHHHHHHHC---CCCCCTTCCEEE--CCSSCEEEEECCHHHHHHHCSEEEEEEEEE
T ss_pred CCC-----------cCHHHHHHHHHHHHHHHcCCCCCcCCCCCCcEEE--ECCCCEEEeeCCHHHHHHcCCCEEEEEecC
Confidence 743 3466899999999999997542 455666421 112234445543311 111 11
Q ss_pred ec------ccCCCeEEEEEEc--CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc-----ccccCcccchhh
Q psy2951 388 VG------DLEALKFTAYYSN--ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS-----LPHSHRCLGVVL 444 (1466)
Q Consensus 388 ~g------~~~~~~~~~~~~~--~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~-----~~~~~p~~~e~~ 444 (1466)
.. .-+..+|.+++.+ +++|+|++++|. ++++..++ .+|+++.+. ++++|||++|.+
T Consensus 396 ~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~-~ai~~~~t~~~l~~~~~~hPt~~e~~ 466 (484)
T 3o0h_A 396 RPMRNVLSGSPEKMFMKLVVDGESRIVVGAHVLGENAGEIAQLIG-ISLKGKLTKDIFDKTMAVHPTMSEEL 466 (484)
T ss_dssp CCHHHHHHTCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHH-HHHHTTCBHHHHHHSCCCSSCSGGGG
T ss_pred CcchhhccCCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHH-HHHHCCCCHHHHhccccCCCChHHHH
Confidence 11 1135789998887 489999999998 45677766 999999886 899999999998
No 74
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=2.3e-34 Score=356.27 Aligned_cols=381 Identities=19% Similarity=0.256 Sum_probs=268.2
Q ss_pred CCCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCC------CCCCCC----Cccch----------------hccc-
Q psy2951 41 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN------FLPYDR----VKLSK----------------QLDI- 93 (1466)
Q Consensus 41 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~------~~~~~~----~~~~~----------------~~~~- 93 (1466)
+.++||+||||||||++||..|++.|.++.|++..+.. .+.... +..++ .+..
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~ 109 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWK 109 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcc
Confidence 45689999999999999999999999988886542210 010000 00000 0000
Q ss_pred -------Ccccc-----------cccChhhhhcCCeEEEeCceEEEeccccccEEEecCCc--EEecCEEEEccCCCCCC
Q psy2951 94 -------KADSI-----------LLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGT--SIDFTKIYLATGSSPRT 153 (1466)
Q Consensus 94 -------~~~~~-----------~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~~~--~~~~d~lviAtG~~~~~ 153 (1466)
+...+ ...+...++..+++++.+...+. +....++...++. ++.||+||||||++|+.
T Consensus 110 ~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~--d~~~v~v~~~~g~~~~i~~d~lViATGs~p~~ 187 (519)
T 3qfa_A 110 VEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFI--GPHRIKATNNKGKEKIYSAERFLIATGERPRY 187 (519)
T ss_dssp CCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEE--ETTEEEEECTTCCCCEEEEEEEEECCCEEECC
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEe--eCCEEEEEcCCCCEEEEECCEEEEECCCCcCC
Confidence 00001 11122345667999999987654 3344555555554 79999999999999986
Q ss_pred CCCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHH
Q psy2951 154 ISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKL 233 (1466)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~ 233 (1466)
+ .+++... ...+..+...+. ..+++++|||+|++|+|+|..|+++|.+||++++. . +.+.+++++.+.+.+.
T Consensus 188 p-~i~G~~~--~~~t~~~~~~l~---~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~-~l~~~d~~~~~~~~~~ 259 (519)
T 3qfa_A 188 L-GIPGDKE--YCISSDDLFSLP---YCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-I-LLRGFDQDMANKIGEH 259 (519)
T ss_dssp C-CCTTHHH--HCBCHHHHTTCS---SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-C-SSTTSCHHHHHHHHHH
T ss_pred C-CCCCccC--ceEcHHHHhhhh---hcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-c-ccccCCHHHHHHHHHH
Confidence 5 4555332 122445554433 23568999999999999999999999999999985 3 3467899999999999
Q ss_pred HHhCCcEEEcCceEEEEEecCC---CCeE-EEEcCCC-c--EEeccEEEEeeccccCccc--cccCCceec-CCccEEEC
Q psy2951 234 FESKGVKFVMKANVSSFEKNEK---NDVT-AANLDNG-T--TIPADLVIVGIGTVLNTNY--LDGKGVELN-GQKAVVVN 303 (1466)
Q Consensus 234 l~~~GV~i~~~~~v~~i~~~~~---~~~~-~v~~~~g-~--~i~~D~Vi~a~G~~p~~~~--l~~~gl~~~-~~g~i~vd 303 (1466)
|++.||++++++.+++++..++ +.+. .+...++ + ++++|.|++|+|++||+++ ++..|++++ ++|+|.||
T Consensus 260 l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd 339 (519)
T 3qfa_A 260 MEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVT 339 (519)
T ss_dssp HHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCC
T ss_pred HHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeC
Confidence 9999999999988888765322 2222 2233444 2 5789999999999999986 678889998 57999999
Q ss_pred CCCCcCCCCEEEecccccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCCC---CCCCCCcccccccceeeEEEEeec
Q psy2951 304 EYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT---SLSTIPFFWTMLFGVGFRFAGYAA 380 (1466)
Q Consensus 304 ~~~~t~~~~iya~GD~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~~---~~~~~p~~~s~~~~~~~~~~G~~~ 380 (1466)
+++||+.|+|||+|||+... +..+..|..||+.+|+||++... .+..+|+. ......+..+|.+.
T Consensus 340 ~~~~Ts~~~IyA~GD~~~g~----------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~--~~~~p~~a~vGlte 407 (519)
T 3qfa_A 340 DEEQTNVPYIYAIGDILEDK----------VELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTT--VFTPLEYGACGLSE 407 (519)
T ss_dssp TTSBCSSTTEEECGGGBSSS----------CCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEE--ECSSSCEEEEECCH
T ss_pred CCCccCCCCEEEEEeccCCC----------CccHHHHHHHHHHHHHHHcCCCCccCCCCcCcEE--EECCCceEEecCCH
Confidence 99999999999999998321 24567899999999999997643 34555532 22233345555543
Q ss_pred CC-------ceEE-----Ee-------cccCCCeEEEEEEc---CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc----
Q psy2951 381 GH-------TQVD-----IV-------GDLEALKFTAYYSN---ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS---- 432 (1466)
Q Consensus 381 ~~-------~~~~-----~~-------g~~~~~~~~~~~~~---~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~---- 432 (1466)
.. ..+. +. +..+..+|.+++.+ +++|+|++++|. +++++.++ .+|+++.+.
T Consensus 408 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~-~ai~~~~t~~~l~ 486 (519)
T 3qfa_A 408 EKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFA-AALKCGLTKKQLD 486 (519)
T ss_dssp HHHHHHHCGGGEEEEEEEECCHHHHTTTCCTTTEEEEEEEETTTTCEEEEEEEESTTHHHHHHHHH-HHHHTTCBHHHHH
T ss_pred HHHHhhCCCCCEEEEEEeccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCCHHHHh
Confidence 11 1121 11 01135789999886 389999999998 46777776 999999886
Q ss_pred -ccccCcccchhh
Q psy2951 433 -LPHSHRCLGVVL 444 (1466)
Q Consensus 433 -~~~~~p~~~e~~ 444 (1466)
++++|||++|.+
T Consensus 487 ~~~~~hPt~~E~~ 499 (519)
T 3qfa_A 487 STIGIHPVCAEVF 499 (519)
T ss_dssp HSCCCTTCGGGGG
T ss_pred ccccCCCChHHHH
Confidence 899999999998
No 75
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=5.9e-35 Score=359.62 Aligned_cols=364 Identities=20% Similarity=0.255 Sum_probs=270.0
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCC---C-CCchhhc----------------c-------Cc
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDR---V-KLSKQLD----------------I-------KA 1118 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~---~-~l~~~~~----------------~-------~~ 1118 (1466)
.++|+|||||+||+++|..|++.|. +|+|||+++.++... . ..++.+. . ..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~--~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~ 83 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGL--KVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDI 83 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC--CEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC--eEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCH
Confidence 3689999999999999999999998 999999976543110 0 0000000 0 00
Q ss_pred ccccc-----------cChhhhccCCcEEEcCCeEEEeecCCCCeEEecCC------------cEEecCeEEEecCCCCC
Q psy2951 1119 DSILL-----------RTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDG------------TSIDFTKIYLATGSSPR 1175 (1466)
Q Consensus 1119 ~~~~~-----------~~~~~~~~~~v~~~~~~~v~~i~d~~~~~v~~~~g------------~~~~yd~lvlAtG~~~~ 1175 (1466)
..+.. ....++++.+++++.++. ..+ +...-.|.+.+| .++.||+||+|||+.|+
T Consensus 84 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~-~~~-~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~ 161 (482)
T 1ojt_A 84 DMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDG-QFL-DPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVT 161 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEE-EEE-ETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEE-EEc-cCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCC
Confidence 00000 011345667999998884 446 654333444455 67999999999999998
Q ss_pred cCC-CCCCCCcEEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHH
Q psy2951 1176 TIS-QADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERIT 1254 (1466)
Q Consensus 1176 ~~~-~~~g~~~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~ 1254 (1466)
.|+ ++ ....+ .+.+++..+. ..+++++|||+|++|+|+|..|++.|.+|+++++.+++++ .+++++.+.+.
T Consensus 162 ~~~~i~-~~~~v---~~~~~~~~~~---~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~-~~~~~~~~~l~ 233 (482)
T 1ojt_A 162 KLPFIP-EDPRI---IDSSGALALK---EVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ-GADRDLVKVWQ 233 (482)
T ss_dssp CCSSCC-CCTTE---ECHHHHTTCC---CCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST-TSCHHHHHHHH
T ss_pred CCCCCC-ccCcE---EcHHHHhccc---ccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc-ccCHHHHHHHH
Confidence 887 44 22133 3566765543 2479999999999999999999999999999999998886 68899999999
Q ss_pred HHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCC----CCeeecCEEEEeeccccCccc--cccCCceeeCCCeEEeCCC
Q psy2951 1255 KLFESKGVKFVMKANVSSFEKNEKNDVTAANLDN----GTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEY 1328 (1466)
Q Consensus 1255 ~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~----g~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~~~G~i~vd~~ 1328 (1466)
+.++++||+++++++|++++ .++ ....|.+.+ |+++++|.||+|+|..|++++ ++.+|+.++.+|+|.||++
T Consensus 234 ~~l~~~gV~i~~~~~v~~i~-~~~-~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~ 311 (482)
T 1ojt_A 234 KQNEYRFDNIMVNTKTVAVE-PKE-DGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQ 311 (482)
T ss_dssp HHHGGGEEEEECSCEEEEEE-EET-TEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCTT
T ss_pred HHHHhcCCEEEECCEEEEEE-EcC-CeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCCC
Confidence 99999999999999999998 333 334577766 788999999999999999997 6889999988889999999
Q ss_pred ccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCCCC--CCCCccc-eeccccccEEEEeeCC--
Q psy2951 1329 LETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS--LSTIPFF-WTMLFGVGFRFAGYAA-- 1403 (1466)
Q Consensus 1329 ~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~~--~~~~p~~-w~~~~~~~~~~~g~~~-- 1403 (1466)
+||+.|+|||+|||+..|.. ++.|..||++||.||+|...+ +..+|++ |+ +..+-.+|..+
T Consensus 312 ~~t~~~~IyA~GD~~~~~~l-----------~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~---~~~~a~vG~te~~ 377 (482)
T 1ojt_A 312 MRTNVPHIYAIGDIVGQPML-----------AHKAVHEGHVAAENCAGHKAYFDARVIPGVAYT---SPEVAWVGETELS 377 (482)
T ss_dssp SBCSSTTEEECGGGTCSSCC-----------HHHHHHHHHHHHHHHTTCCCCCCCCCCCEEECS---SSCEEEEECCHHH
T ss_pred cccCCCCEEEEEcccCCCcc-----------HHHHHHHHHHHHHHHcCCCccCCCCCCCEEEEc---CCCeEEEeCCHHH
Confidence 99999999999999986543 378999999999999997654 4566755 44 46677777642
Q ss_pred ---CCceEEE-------------cCCcCCceEEEEEE--eCCEEEEEEEecCc--HHHHHHHHHHHcCCCCChhcccc
Q psy2951 1404 ---GHTQVDI-------------VGDLEALKFTAYYS--NADKVLAILTVGMD--PLAAQFAERIKMQKYIQKDQIEN 1461 (1466)
Q Consensus 1404 ---~~~~~~~-------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 1461 (1466)
...++.+ .+ ++..|+++++ ++++|+|+..+|.. ..+..+.-+|+.+ ++.++|++
T Consensus 378 a~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~--~~~~~l~~ 451 (482)
T 1ojt_A 378 AKASARKITKANFPWAASGRAIANG--CDKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMG--CDAADIGK 451 (482)
T ss_dssp HHHHTCCEEEEEEEGGGCHHHHHTT--CCSCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTT--CBHHHHHT
T ss_pred HHhcCCCEEEEEEEcCcchHHhhcC--CCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC--CCHHHHhc
Confidence 0111221 12 3456888888 57999999999996 3355566677776 44555533
No 76
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=8.8e-35 Score=354.35 Aligned_cols=364 Identities=22% Similarity=0.302 Sum_probs=270.2
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCC----CCch-----------------hhcc-------C
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRV----KLSK-----------------QLDI-------K 1117 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~----~l~~-----------------~~~~-------~ 1117 (1466)
+++|+|||||+||++||..|++.|. +|+|||+++ ++.... ..++ .+.. +
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~--~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~ 80 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQ--KCALIEAKE-LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFN 80 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTC--CEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC--eEEEEcCCC-CCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccC
Confidence 4689999999999999999999988 999999974 221000 0000 0000 0
Q ss_pred cccc-----------cccChhhhccCCcEEEcCCeEEEeecCCCCeEEecCCcEEecCeEEEecCCCCCcCCCCCCCCcE
Q psy2951 1118 ADSI-----------LLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKV 1186 (1466)
Q Consensus 1118 ~~~~-----------~~~~~~~~~~~~v~~~~~~~v~~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~~v 1186 (1466)
...+ .......+.+.+++++.++ +..+ ++ ++|.+ ++.++.||+||+|||++|+.|++| |.+.
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~i-~~--~~v~~-~g~~~~~d~lviAtGs~p~~p~i~-g~~~- 153 (450)
T 1ges_A 81 WETLIASRTAYIDRIHTSYENVLGKNNVDVIKGF-ARFV-DA--KTLEV-NGETITADHILIATGGRPSHPDIP-GVEY- 153 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-CEEE-ET--TEEEE-TTEEEEEEEEEECCCEEECCCCST-TGGG-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe-cC--CEEEE-CCEEEEeCEEEECCCCCCCCCCCC-Cccc-
Confidence 0000 0001123456799999997 6778 75 57887 778899999999999999999998 7653
Q ss_pred EEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEc
Q psy2951 1187 FYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVM 1266 (1466)
Q Consensus 1187 ~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~ 1266 (1466)
..+.+++..+. ..+++++|||+|++|+|+|..|++.|.+|+++++.+.+++ .+++++.+.+.+.+++.||++++
T Consensus 154 --~~~~~~~~~~~---~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~Gv~i~~ 227 (450)
T 1ges_A 154 --GIDSDGFFALP---ALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP-SFDPMISETLVEVMNAEGPQLHT 227 (450)
T ss_dssp --SBCHHHHHHCS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHSCEEEC
T ss_pred --eecHHHhhhhh---hcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh-hhhHHHHHHHHHHHHHCCCEEEe
Confidence 23566665543 3478999999999999999999999999999999988776 68899999999999999999999
Q ss_pred CceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCcc-c-cccCCceeeCCCeEEeCCCccccCCCEEEeccccc
Q psy2951 1267 KANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN-Y-LDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAY 1344 (1466)
Q Consensus 1267 ~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~~-~-~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~ 1344 (1466)
+++|++++ .+++....|.+.+|+++++|.||+|+|..|+++ + ++.+|+.++.+|+|.||++++|+.|+|||+|||+.
T Consensus 228 ~~~v~~i~-~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t~~~~IyA~GD~~~ 306 (450)
T 1ges_A 228 NAIPKAVV-KNTDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTG 306 (450)
T ss_dssp SCCEEEEE-ECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECSGGGT
T ss_pred CCEEEEEE-EeCCcEEEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCccCCCCEEEEeccCC
Confidence 99999998 333233468889999999999999999999998 3 57789999988999999999999999999999986
Q ss_pred CCCccCCCceeeeecHHHHHHHHHHHHHHhcCCC----CCCCCCccceeccccccEEEEeeCC-------CCceEEEcC-
Q psy2951 1345 APLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK----TSLSTIPFFWTMLFGVGFRFAGYAA-------GHTQVDIVG- 1412 (1466)
Q Consensus 1345 ~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~----~~~~~~p~~w~~~~~~~~~~~g~~~-------~~~~~~~~~- 1412 (1466)
.+. .|+.|..||+.||.||+|.. ..|..+|+.. .++..+..+|..+ +.+.+.+..
T Consensus 307 ~~~-----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~--~~~~~~a~vG~~e~~a~~~~g~~~~~~~~~ 373 (450)
T 1ges_A 307 AVE-----------LTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVV--FSHPPIGTVGLTEPQAREQYGDDQVKVYKS 373 (450)
T ss_dssp SCC-----------CHHHHHHHHHHHHHHHHTTCTTCCCCCSSCCEEE--CCSSCEEEEECCHHHHHHHHCGGGEEEEEE
T ss_pred CCc-----------cHHHHHHHHHHHHHHHcCCCCcccCCCCCCCeEE--ECCCceEEEeCCHHHHHhcCCCCcEEEEEE
Confidence 543 34889999999999999854 2355677541 2346777788752 102232210
Q ss_pred ----------CcCCceEEEEEEe--CCEEEEEEEecCcHH--HHHHHHHHHcCCCCChhcccc
Q psy2951 1413 ----------DLEALKFTAYYSN--ADKVLAILTVGMDPL--AAQFAERIKMQKYIQKDQIEN 1461 (1466)
Q Consensus 1413 ----------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 1461 (1466)
..++..|++..++ +++|+|+..+|.... +..+.-+|+.+ ++.++|++
T Consensus 374 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~--~t~~~l~~ 434 (450)
T 1ges_A 374 SFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMG--ATKKDFDN 434 (450)
T ss_dssp EEECHHHHTSSSCCEEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTT--CBHHHHHT
T ss_pred ECchhhHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC--CCHHHHhc
Confidence 1134567777764 789999999998522 23333345555 45555543
No 77
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=1.8e-34 Score=354.95 Aligned_cols=364 Identities=20% Similarity=0.294 Sum_probs=270.6
Q ss_pred CCcEEEECCchHHHHHHHHHHh-cCCCCcEEEEcC--------CCCCCCCCCC----Cchhh----------------cc
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQ-NGFTGKLYFITD--------ENFLPYDRVK----LSKQL----------------DI 1116 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~-~g~~~~i~li~~--------~~~~~~~~~~----l~~~~----------------~~ 1116 (1466)
+++|+|||||+||++||..|++ .|. +|+|||+ ...++..... -++.+ ..
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~--~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~ 84 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGK--RVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGW 84 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCC--CEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCC--eEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCc
Confidence 4689999999999999999999 998 9999993 2222110000 00000 00
Q ss_pred ---------Cccccc-----------ccChhhhccC-CcEEEcCCeEEEeecCCCCeEEec---C-----CcEEecCeEE
Q psy2951 1117 ---------KADSIL-----------LRTEEFYKDN-DIHVIKGKKIISDSELNEKKIKLQ---D-----GTSIDFTKIY 1167 (1466)
Q Consensus 1117 ---------~~~~~~-----------~~~~~~~~~~-~v~~~~~~~v~~i~d~~~~~v~~~---~-----g~~~~yd~lv 1167 (1466)
+...+. ......+++. +|+++.++ +..+ +. ++|.++ + +..+.||+||
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i-~~--~~v~v~~~~~~~~~~~~~~~~d~lV 160 (495)
T 2wpf_A 85 EFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGW-GSLE-SK--NVVVVRETADPKSAVKERLQADHIL 160 (495)
T ss_dssp ECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESE-EEEE-ET--TEEEEESSSSTTSCEEEEEEEEEEE
T ss_pred ccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeE-EEEe-eC--CEEEEeecCCccCCCCeEEEcCEEE
Confidence 000000 0001234566 99999987 8888 75 678876 4 6789999999
Q ss_pred EecCCCCCcCCCCCCCCcEEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcC---CCeEEEEcCCCcCCccc
Q psy2951 1168 LATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASK---VKSVTVVGRGAVPFQES 1244 (1466)
Q Consensus 1168 lAtG~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~---g~~v~vv~~~~~~~~~~ 1244 (1466)
||||++|+.|++| |.+.++ +.+++..+. ..+++++|||+|++|+|+|..|++. |.+|+++++.+++++ .
T Consensus 161 iATGs~p~~p~i~-G~~~~~---~~~~~~~~~---~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-~ 232 (495)
T 2wpf_A 161 LATGSWPQMPAIP-GIEHCI---SSNEAFYLP---EPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR-G 232 (495)
T ss_dssp ECCCEEECCCCCT-TGGGCE---EHHHHTTCS---SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT-T
T ss_pred EeCCCCcCCCCCC-Cccccc---cHHHHHhhh---hcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc-c
Confidence 9999999999998 875433 345554433 3478999999999999999999999 999999999998885 6
Q ss_pred ccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCcc-c-cccCCceeeCCCe
Q psy2951 1245 LGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN-Y-LDGKGVELNGQKA 1322 (1466)
Q Consensus 1245 ~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~~-~-~~~~gl~~~~~G~ 1322 (1466)
+++++.+.+.+.++++||+++++++|++++ .+++....|.+.+|+++++|.||+|+|..|+++ + ++.+|+.++.+|+
T Consensus 233 ~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~ 311 (495)
T 2wpf_A 233 FDETIREEVTKQLTANGIEIMTNENPAKVS-LNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGG 311 (495)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEESCCEEEEE-ECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSS
T ss_pred cCHHHHHHHHHHHHhCCCEEEeCCEEEEEE-EcCCceEEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCC
Confidence 889999999999999999999999999998 333334568889999999999999999999998 4 6788999998889
Q ss_pred EEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCCC---CCCCCccceeccccccEEEE
Q psy2951 1323 VVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT---SLSTIPFFWTMLFGVGFRFA 1399 (1466)
Q Consensus 1323 i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~---~~~~~p~~w~~~~~~~~~~~ 1399 (1466)
|.||+++||+.|+|||+|||+..+. .|+.|..||++||.||+|... .|..+| |...++..+..+
T Consensus 312 i~Vd~~~~t~~~~IyA~GD~~~~~~-----------l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p--~~~~~~~~~a~v 378 (495)
T 2wpf_A 312 VQVDEFSRTNVPNIYAIGDITDRLM-----------LTPVAINEGAALVDTVFGNKPRKTDHTRVA--SAVFSIPPIGTC 378 (495)
T ss_dssp BCCCTTCBCSSTTEEECGGGGCSCC-----------CHHHHHHHHHHHHHHHHSSCCCCCCCSSCE--EEECCSSCEEEE
T ss_pred EEECCCCccCCCCEEEEeccCCCcc-----------CHHHHHHHHHHHHHHhcCCCCCcCCCCCCC--EEEECCCCeEEE
Confidence 9999999999999999999986433 358999999999999998542 455666 333446788888
Q ss_pred eeCC-----CCceEEE-cC----------CcCCceE-EEEEEe--CCEEEEEEEecCcHH--HHHHHHHHHcCCCCChhc
Q psy2951 1400 GYAA-----GHTQVDI-VG----------DLEALKF-TAYYSN--ADKVLAILTVGMDPL--AAQFAERIKMQKYIQKDQ 1458 (1466)
Q Consensus 1400 g~~~-----~~~~~~~-~~----------~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 1458 (1466)
|+.+ ..+.+.+ .. +.++..| ++.+++ +++|+|+..+|.... +..+.-+|+.+ ++.++
T Consensus 379 Gl~e~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~--~t~~~ 456 (495)
T 2wpf_A 379 GLIEEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLN--AKISD 456 (495)
T ss_dssp ECCHHHHHHHSSEEEEEEEEECCTHHHHHSCTTCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTT--CBHHH
T ss_pred eCCHHHHHhcCCCEEEEEEecCchhhhhhcCCCcEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC--CCHHH
Confidence 9753 1222322 10 1134568 887775 689999999998632 34455566665 34444
Q ss_pred c
Q psy2951 1459 I 1459 (1466)
Q Consensus 1459 ~ 1459 (1466)
|
T Consensus 457 l 457 (495)
T 2wpf_A 457 F 457 (495)
T ss_dssp H
T ss_pred H
Confidence 4
No 78
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=3.8e-34 Score=350.19 Aligned_cols=358 Identities=23% Similarity=0.308 Sum_probs=271.1
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCC---CC-CCchhhc----------------------cCcc
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD---RV-KLSKQLD----------------------IKAD 1119 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~---~~-~l~~~~~----------------------~~~~ 1119 (1466)
.++|+|||||+||++||..|++.|. +|+|||+++ ++.. .. ..++.+. .+..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~--~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGL--KVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC--CEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC--eEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHH
Confidence 3689999999999999999999998 999999986 2210 00 0011000 0000
Q ss_pred cccc-----------cChhhhccCCcEEEcCCeEEEeecCCCCeEEecCCcEEecCeEEEecCCCCCcCC-CCCCCCcEE
Q psy2951 1120 SILL-----------RTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTIS-QADGVNKVF 1187 (1466)
Q Consensus 1120 ~~~~-----------~~~~~~~~~~v~~~~~~~v~~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~-~~~g~~~v~ 1187 (1466)
.+.. ....++++.+++++.++ +..+ ++ ++|.+. |.++.||+||+|||++|+.|+ ++ |..+++
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~-~~~~-~~--~~v~v~-g~~~~~d~lViATGs~p~~p~gi~-~~~~v~ 156 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVELLRGF-ARLV-GP--KEVEVG-GERYGAKSLILATGSEPLELKGFP-FGEDVW 156 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEEE-ET--TEEEET-TEEEEEEEEEECCCEEECCBTTBC-CSSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeee-EEEc-cC--CEEEEc-cEEEEeCEEEEcCCCCCCCCCCCC-CCCcEE
Confidence 0000 01234566799999998 5567 64 578886 778999999999999999886 66 522433
Q ss_pred EecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcC
Q psy2951 1188 YLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMK 1267 (1466)
Q Consensus 1188 ~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~ 1267 (1466)
+.+++.++.+. .+++++|||+|++|+|+|..|++.|.+|+++++.+++++ .+++++.+.+.+.++++||+++++
T Consensus 157 ---~~~~~~~l~~~--~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gV~i~~~ 230 (464)
T 2eq6_A 157 ---DSTRALKVEEG--LPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP-QGDPETAALLRRALEKEGIRVRTK 230 (464)
T ss_dssp ---CHHHHTCGGGC--CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHTTCEEECS
T ss_pred ---cHHHHHhhhhh--cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHhcCCEEEcC
Confidence 56777665542 368999999999999999999999999999999988876 678999999999999999999999
Q ss_pred ceEEEEEecCCCcEEEEEcC-C--CC--eeecCEEEEeeccccCccc--cccCCceeeCCCeEEeCCCccccCCCEEEec
Q psy2951 1268 ANVSSFEKNEKNDVTAANLD-N--GT--TIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAGG 1340 (1466)
Q Consensus 1268 ~~v~~i~~~~~g~~~~v~l~-~--g~--~i~~D~vv~a~G~~p~~~~--~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~G 1340 (1466)
++|++++ .+++ ...|.+. + |+ ++++|.||+|+|..|++++ ++..|+.++.+|+|.||+++||+.|+|||+|
T Consensus 231 ~~v~~i~-~~~~-~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~G 308 (464)
T 2eq6_A 231 TKAVGYE-KKKD-GLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIG 308 (464)
T ss_dssp EEEEEEE-EETT-EEEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBCSSTTEEECG
T ss_pred CEEEEEE-EeCC-EEEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCcccCCCCEEEEe
Confidence 9999998 3333 3446665 6 77 8999999999999999986 5778999888889999999999999999999
Q ss_pred ccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCCC--CCCCCccceeccccccEEEEeeCC------CCceEEE--
Q psy2951 1341 DIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT--SLSTIPFFWTMLFGVGFRFAGYAA------GHTQVDI-- 1410 (1466)
Q Consensus 1341 D~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~--~~~~~p~~w~~~~~~~~~~~g~~~------~~~~~~~-- 1410 (1466)
||+..|.. ++.|..||+.||.||+|... .+. +|++ ..++..+..+|..+ +.+ +.+
T Consensus 309 D~~~~~~l-----------~~~A~~~g~~aa~~i~g~~~~~~~~-~p~~--~~~~~~~a~vG~~e~~a~~~g~~-~~~~~ 373 (464)
T 2eq6_A 309 DAARPPLL-----------AHKAMREGLIAAENAAGKDSAFDYQ-VPSV--VYTSPEWAGVGLTEEEAKRAGYK-VKVGK 373 (464)
T ss_dssp GGTCSSCC-----------HHHHHHHHHHHHHHHTTCCCCCCCC-CCEE--ECSSSEEEEEECCHHHHHHTTCC-EEEEE
T ss_pred ccCCCccc-----------HHHHHHHHHHHHHHhcCCCcccCCC-CCeE--EECCCCEEEEeCCHHHHHhcCCC-EEEEE
Confidence 99976543 37899999999999999655 345 7754 33457888888753 222 221
Q ss_pred -----------cCCcCCceEEEEEEe--CCEEEEEEEecCcH--HHHHHHHHHHcCCCCChhcc
Q psy2951 1411 -----------VGDLEALKFTAYYSN--ADKVLAILTVGMDP--LAAQFAERIKMQKYIQKDQI 1459 (1466)
Q Consensus 1411 -----------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 1459 (1466)
.+ ++..|++++++ +++|+|+..+|... .+..+.-+|+.+ ++.++|
T Consensus 374 ~~~~~~~~~~~~~--~~~g~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~--~~~~~l 433 (464)
T 2eq6_A 374 FPLAASGRALTLG--GAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMG--ATLTDL 433 (464)
T ss_dssp EEGGGCHHHHHTS--CCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTT--CBHHHH
T ss_pred EEcCcchhhhhcC--CCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC--CCHHHH
Confidence 12 24568888875 68999999999973 346666678777 344555
No 79
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=6.4e-34 Score=352.05 Aligned_cols=346 Identities=19% Similarity=0.247 Sum_probs=264.4
Q ss_pred CCeEEEEcCchHHHHHHHHHHHc---CCCccEEEEcCCCCCCCCC--------------------------Cccc---hh
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQN---GFTGKLYFITDENFLPYDR--------------------------VKLS---KQ 642 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~---g~~~~v~~~~~~~~~~~~~--------------------------~~~~---~~ 642 (1466)
++||+|||||+||++||+.|+++ |++ |+++|++. +++.. ..+. ..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~--V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~ 78 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQ--VTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDD 78 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEE--EEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC-----
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCE--EEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCC
Confidence 37999999999999999999999 876 88898875 22110 0000 00
Q ss_pred cccCccccc-----------ccCHhHhhhCCcEEEEceEEEEeccc------cccEEEccCCC--EEecCEEEEcCCCCC
Q psy2951 643 LDIKADSIL-----------LRTEEFYKDNDIHVIKGKKIISDSEL------NEKKIKLQDGT--SIDFTKIYLATGSSP 703 (1466)
Q Consensus 643 ~~~~~~~~~-----------~~~~~~~~~~gv~~~~~~~v~~i~~~------~~~~v~~~~~~--~~~~d~lviAtG~~~ 703 (1466)
...+...+. ..+.+++++.+++++.++ +..+ +. ....+.+.++. .+.||+||+|||++|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i-~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p 156 (499)
T 1xdi_A 79 AKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGR-GELI-DSTPGLARHRIKATAADGSTSEHEADVVLVATGASP 156 (499)
T ss_dssp -CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEEC-CSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEE
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe-cCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 001111111 123456677899999998 7777 66 34456666676 799999999999999
Q ss_pred CcCCCCCCCC--cEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHH
Q psy2951 704 RTISQADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGER 781 (1466)
Q Consensus 704 ~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~ 781 (1466)
..|+++ |.+ .++.. .+...+ ...+++++|||+|++|+|+|..|++.|.+|+++++.+.++. .+++++.+.
T Consensus 157 ~~p~i~-g~~~~~v~~~---~~~~~~---~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-~~d~~~~~~ 228 (499)
T 1xdi_A 157 RILPSA-QPDGERILTW---RQLYDL---DALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP-YEDADAALV 228 (499)
T ss_dssp CCCGGG-CCCSSSEEEG---GGGGGC---SSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC-CSSHHHHHH
T ss_pred CCCCCC-CCCcCcEEeh---hHhhhh---hccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc-ccCHHHHHH
Confidence 999988 766 34433 333222 23479999999999999999999999999999999998774 589999999
Q ss_pred HHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccCccc--cccCCceeeCCCcEEeCCCCC
Q psy2951 782 ITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLE 859 (1466)
Q Consensus 782 ~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~~~G~i~vd~~~~ 859 (1466)
+.+.+++.||+++++++|++++.. ++.+ .+.+.+|+++++|.||+|+|++|++++ ++.+|++++++|+|.||+++|
T Consensus 229 l~~~l~~~GV~i~~~~~V~~i~~~-~~~v-~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~ 306 (499)
T 1xdi_A 229 LEESFAERGVRLFKNARAASVTRT-GAGV-LVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSR 306 (499)
T ss_dssp HHHHHHHTTCEEETTCCEEEEEEC-SSSE-EEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSSB
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEe-CCEE-EEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCcc
Confidence 999999999999999999999853 3333 567788889999999999999999988 788899999899999999999
Q ss_pred CCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccC-CCc--CcccCeeeeeecCceeEEeeccCC---
Q psy2951 860 TNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEK-KTS--LSTIPFFWTMLFGVGFRFAGYAAG--- 933 (1466)
Q Consensus 860 t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~-~~~--~~~~~~~~~~~~~~~~~~~g~~~~--- 933 (1466)
|+.|+|||+|||+..+. .++.|..||+.+|.+|++. ... +..+|+++ +++..+..+|+++.
T Consensus 307 t~~~~IyA~GD~~~~~~-----------l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~--~~~~~~a~vG~~e~~a~ 373 (499)
T 1xdi_A 307 TLATGIYAAGDCTGLLP-----------LASVAAMQGRIAMYHALGEGVSPIRLRTVAATV--FTRPEIAAVGVPQSVID 373 (499)
T ss_dssp CSSTTEEECSGGGTSCS-----------CHHHHHHHHHHHHHHHTTCCCCCCCGGGCEEEE--CSSSEEEEEESCHHHHH
T ss_pred cCCCCEEEEeccCCCcc-----------cHHHHHHHHHHHHHHhcCCCCccCCCCCCcEEE--EecCCceEeCCCHHHHH
Confidence 99999999999997653 3478999999999999986 232 45566433 56777888887652
Q ss_pred ---CCceeEec----------ccccceEEEEEec--CCeEEEEEeecCch
Q psy2951 934 ---HTQVDIVG----------DLEALKFTAYYSN--ADKVLAILTVGMDP 968 (1466)
Q Consensus 934 ---~~~~~~~~----------~~~~~~~~~~~~~--~~~i~g~~~~g~~~ 968 (1466)
.+-....- .-+...|.|++++ +++++|++++|...
T Consensus 374 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a 423 (499)
T 1xdi_A 374 AGSVAARTIMLPLRTNARAKMSEMRHGFVKIFCRRSTGVVIGGVVVAPIA 423 (499)
T ss_dssp HTSSCEEEEEEESTTSHHHHHTTCSSCEEEEEEETTTCBEEEEEEEETTH
T ss_pred hCCCCEEEEEEecCcccceeecCCCceEEEEEEECCCCEEEEEEEECCch
Confidence 11111000 1134578999984 69999999999973
No 80
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=4e-34 Score=352.85 Aligned_cols=380 Identities=20% Similarity=0.227 Sum_probs=271.3
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCC------CCCCCCC----Cccc----------------hhccc--
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDE------NFLPYDR----VKLS----------------KQLDI-- 93 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~------~~~~~~~----~~~~----------------~~~~~-- 93 (1466)
.++||+||||||||++||..|++.|.++.|++..+. ..+.... +..+ ..+..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 468999999999999999999999998888654211 0011000 0000 00000
Q ss_pred ------Ccccc-----------cccChhhhhcCCeEEEeCceEEEeccccccEEEecCC--cEEecCEEEEccCCCCCCC
Q psy2951 94 ------KADSI-----------LLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDG--TSIDFTKIYLATGSSPRTI 154 (1466)
Q Consensus 94 ------~~~~~-----------~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~~--~~~~~d~lviAtG~~~~~~ 154 (1466)
+...+ ...+...+++.+++++.+..... +....++...++ .++.||+||||||++|..+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~--~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p 162 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFV--DEHTVRGVDKGGKATLLSAEHIVIATGGRPRYP 162 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEES--SSSEEEEECTTSCEEEEEEEEEEECCCEEECCC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc--cCCeEEEEeCCCceEEEECCEEEEcCCCCCCCC
Confidence 00011 11123345667999998886643 444455665566 4799999999999999865
Q ss_pred CCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHH
Q psy2951 155 SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLF 234 (1466)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l 234 (1466)
+.+++.... ..+..+...+. ..+++++|||+|++|+|+|..+++.|.+|+++++.. +.+.+++++.+.+.+.+
T Consensus 163 ~~i~G~~~~--~~~~~~~~~~~---~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~--~l~~~d~~~~~~l~~~l 235 (488)
T 3dgz_A 163 TQVKGALEY--GITSDDIFWLK---ESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI--PLRGFDQQMSSLVTEHM 235 (488)
T ss_dssp SSCBTHHHH--CBCHHHHTTCS---SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC--SSTTSCHHHHHHHHHHH
T ss_pred CCCCCcccc--cCcHHHHHhhh---hcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc--ccccCCHHHHHHHHHHH
Confidence 535554221 12445544433 245789999999999999999999999999999864 34578899999999999
Q ss_pred HhCCcEEEcCceEEEEEecCCCCeEEEEc---CCCc--EEeccEEEEeeccccCccc--cccCCceec-CCccEEECCCC
Q psy2951 235 ESKGVKFVMKANVSSFEKNEKNDVTAANL---DNGT--TIPADLVIVGIGTVLNTNY--LDGKGVELN-GQKAVVVNEYL 306 (1466)
Q Consensus 235 ~~~GV~i~~~~~v~~i~~~~~~~~~~v~~---~~g~--~i~~D~Vi~a~G~~p~~~~--l~~~gl~~~-~~g~i~vd~~~ 306 (1466)
+++||++++++.+++++..+++.+. +.+ .+|+ ++++|.||+|+|++|++++ ++..+++++ ++|+|.||+++
T Consensus 236 ~~~gv~~~~~~~v~~i~~~~~~~~~-v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~ 314 (488)
T 3dgz_A 236 ESHGTQFLKGCVPSHIKKLPTNQLQ-VTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQE 314 (488)
T ss_dssp HHTTCEEEETEEEEEEEECTTSCEE-EEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTS
T ss_pred HHCCCEEEeCCEEEEEEEcCCCcEE-EEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCCC
Confidence 9999999999999999874433332 333 2354 5799999999999999997 577889998 78999999999
Q ss_pred CcCCCCEEEecccccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCCC---CCCCCCcccccccceeeEEEEeecCC-
Q psy2951 307 ETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT---SLSTIPFFWTMLFGVGFRFAGYAAGH- 382 (1466)
Q Consensus 307 ~t~~~~iya~GD~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~~---~~~~~p~~~s~~~~~~~~~~G~~~~~- 382 (1466)
||+.|+|||+|||+... +..+..|..||+.+|.||++... .+..+|+.+.. ...+..+|.+...
T Consensus 315 ~t~~~~IyA~GD~~~~~----------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~--~p~~a~vGlte~~a 382 (488)
T 3dgz_A 315 ATSVPHIYAIGDVAEGR----------PELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTVFT--PLEYGCVGLSEEEA 382 (488)
T ss_dssp BCSSTTEEECGGGBTTC----------CCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECS--SSEEEEEECCHHHH
T ss_pred ccCCCCEEEeEEecCCC----------CcchhHHHHHHHHHHHHHcCCCCccCCCCCCCEEEEC--CCCeEEEeCCHHHH
Confidence 99999999999997421 23566899999999999998643 45666753222 2334556654321
Q ss_pred ------ceEEE-e----c-------ccCCCeEEEEEEc---CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc-----cc
Q psy2951 383 ------TQVDI-V----G-------DLEALKFTAYYSN---ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS-----LP 434 (1466)
Q Consensus 383 ------~~~~~-~----g-------~~~~~~~~~~~~~---~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~-----~~ 434 (1466)
..+.. . . ..+..+|.+++.+ +++|+|++++|. +++++.++ .+|+++.+. ++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~-~ai~~~~t~~~l~~~~ 461 (488)
T 3dgz_A 383 VALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFA-LGIKCGASYAQVMQTV 461 (488)
T ss_dssp HHHHCGGGEEEEEEECCCHHHHHTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHH-HHHHTTCBHHHHHTSC
T ss_pred HhhCCCCcEEEEEccccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCCHHHHhccc
Confidence 11111 1 0 0125789999886 389999999998 56777776 999999886 89
Q ss_pred ccCcccchhh
Q psy2951 435 HSHRCLGVVL 444 (1466)
Q Consensus 435 ~~~p~~~e~~ 444 (1466)
|+|||++|.+
T Consensus 462 ~~hPt~~e~~ 471 (488)
T 3dgz_A 462 GIHPTCSEEV 471 (488)
T ss_dssp CCSSCSTHHH
T ss_pred cCCCChHHHH
Confidence 9999999998
No 81
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=6.3e-34 Score=350.07 Aligned_cols=364 Identities=19% Similarity=0.264 Sum_probs=271.7
Q ss_pred CCcEEEECCchHHHHHHHHHHh-cCCCCcEEEEcC--------CCCCCCCCCC----Cchhh----------------cc
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQ-NGFTGKLYFITD--------ENFLPYDRVK----LSKQL----------------DI 1116 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~-~g~~~~i~li~~--------~~~~~~~~~~----l~~~~----------------~~ 1116 (1466)
+++|+|||||+||++||..|++ .|. +|+|||+ ...++..... -++.+ ..
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~--~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~ 80 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKK--RVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGW 80 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCC--CEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTE
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCC--EEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCc
Confidence 4689999999999999999999 998 9999993 2222211000 00000 00
Q ss_pred ---------Ccccc-----------cccChhhhccC-CcEEEcCCeEEEeecCCCCeEEec-----CC---cEEecCeEE
Q psy2951 1117 ---------KADSI-----------LLRTEEFYKDN-DIHVIKGKKIISDSELNEKKIKLQ-----DG---TSIDFTKIY 1167 (1466)
Q Consensus 1117 ---------~~~~~-----------~~~~~~~~~~~-~v~~~~~~~v~~i~d~~~~~v~~~-----~g---~~~~yd~lv 1167 (1466)
+...+ .......+++. +|+++.++ +..+ ++ +++.+. +| ..+.||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i-~~--~~v~v~~~~~~~g~~~~~~~~d~lv 156 (490)
T 1fec_A 81 ELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGF-GALQ-DN--HTVLVRESADPNSAVLETLDTEYIL 156 (490)
T ss_dssp ECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESE-EEEE-ET--TEEEEESSSSTTSCEEEEEEEEEEE
T ss_pred ccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeE-EEEe-eC--CEEEEEeeccCCCCceEEEEcCEEE
Confidence 00000 00011234567 99999997 8888 75 466663 56 689999999
Q ss_pred EecCCCCCcCCCCCCCCcEEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcC---CCeEEEEcCCCcCCccc
Q psy2951 1168 LATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASK---VKSVTVVGRGAVPFQES 1244 (1466)
Q Consensus 1168 lAtG~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~---g~~v~vv~~~~~~~~~~ 1244 (1466)
||||++|+.|++| |.+.+ .+.+++..+. ..+++++|||+|++|+|+|..|++. |.+|+++++.+++++ .
T Consensus 157 iAtGs~p~~p~i~-g~~~~---~~~~~~~~~~---~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-~ 228 (490)
T 1fec_A 157 LATGSWPQHLGIE-GDDLC---ITSNEAFYLD---EAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR-G 228 (490)
T ss_dssp ECCCEEECCCCSB-TGGGC---BCHHHHTTCS---SCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST-T
T ss_pred EeCCCCCCCCCCC-Cccce---ecHHHHhhhh---hcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc-c
Confidence 9999999999998 76542 3456654433 3478999999999999999999999 999999999998886 6
Q ss_pred ccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCcc-c-cccCCceeeCCCe
Q psy2951 1245 LGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN-Y-LDGKGVELNGQKA 1322 (1466)
Q Consensus 1245 ~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~~-~-~~~~gl~~~~~G~ 1322 (1466)
+++++.+.+.+.++++||+++++++|++++ .+++....|.+.+|+++++|.||+|+|..|+++ + ++.+|+.++.+|+
T Consensus 229 ~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~ 307 (490)
T 1fec_A 229 FDSELRKQLTEQLRANGINVRTHENPAKVT-KNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGA 307 (490)
T ss_dssp SCHHHHHHHHHHHHHTTEEEEETCCEEEEE-ECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSC
T ss_pred cCHHHHHHHHHHHHhCCCEEEeCCEEEEEE-EcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCC
Confidence 889999999999999999999999999998 333333568889999999999999999999998 4 6888999998899
Q ss_pred EEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCCC---CCCCCccceeccccccEEEE
Q psy2951 1323 VVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT---SLSTIPFFWTMLFGVGFRFA 1399 (1466)
Q Consensus 1323 i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~---~~~~~p~~w~~~~~~~~~~~ 1399 (1466)
|.||+++||+.|+|||+|||+..+. .|+.|..||+.||.||+|... .|..+| |...++..+..+
T Consensus 308 I~Vd~~~~t~~~~IyA~GD~~~~~~-----------l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p--~~~~~~~~~a~v 374 (490)
T 1fec_A 308 IKVDAYSKTNVDNIYAIGDVTDRVM-----------LTPVAINEGAAFVDTVFANKPRATDHTKVA--CAVFSIPPMGVC 374 (490)
T ss_dssp BCCCTTCBCSSTTEEECGGGGCSCC-----------CHHHHHHHHHHHHHHHHSSCCCCCCCSSCC--EEECCSSCEEEE
T ss_pred EEECCCCccCCCCEEEEeccCCCcc-----------CHHHHHHHHHHHHHHhcCCCCCcCCCCCcc--EEEECCCCeEEE
Confidence 9999999999999999999986432 358999999999999998542 455666 444446888889
Q ss_pred eeCC-----CCceEEEc-C----------CcCCceEE-EEEEe--CCEEEEEEEecCcHH--HHHHHHHHHcCCCCChhc
Q psy2951 1400 GYAA-----GHTQVDIV-G----------DLEALKFT-AYYSN--ADKVLAILTVGMDPL--AAQFAERIKMQKYIQKDQ 1458 (1466)
Q Consensus 1400 g~~~-----~~~~~~~~-~----------~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 1458 (1466)
|+.+ ..+.+.+. . +.++..|+ +.+++ +++|+|+..+|.... +..+.-+|+.+ ++.++
T Consensus 375 G~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~--~t~~~ 452 (490)
T 1fec_A 375 GYVEEDAAKKYDQVAVYESSFTPLMHNISGSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMG--AKISD 452 (490)
T ss_dssp ECCHHHHHHHCSEEEEEEEEECCHHHHHHSCTTCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTT--CBHHH
T ss_pred eCCHHHHHhcCCCEEEEEeecChhhhhhhcCCCeEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcC--CCHHH
Confidence 9753 12233221 0 11345688 88875 689999999998632 34455566666 34444
Q ss_pred c
Q psy2951 1459 I 1459 (1466)
Q Consensus 1459 ~ 1459 (1466)
|
T Consensus 453 l 453 (490)
T 1fec_A 453 F 453 (490)
T ss_dssp H
T ss_pred H
Confidence 4
No 82
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=1.3e-34 Score=356.35 Aligned_cols=371 Identities=18% Similarity=0.211 Sum_probs=267.1
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCC--------------------Cccchhcc-------cCc
Q psy2951 43 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDR--------------------VKLSKQLD-------IKA 95 (1466)
Q Consensus 43 ~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~~--------------------~~~~~~~~-------~~~ 95 (1466)
++||+||||||||++||..|++.|.++.|++.+. ....- ......+. .+.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~---~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 84 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA---YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNG 84 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC---SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC---CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCH
Confidence 4899999999999999999999999988876432 11000 00000000 111
Q ss_pred ccccccCh-----------hhhhc-CCeEEEeCceEEEeccccccEEEecCCcEEecCEEEEccCCCCCCCCCCCCC-Cc
Q psy2951 96 DSILLRTE-----------EFYKD-NDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGV-NK 162 (1466)
Q Consensus 96 ~~~~~~~~-----------~~~~~-~~v~~~~~~~v~~~~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~~~-~~ 162 (1466)
.++..+.. ..+.. .+++++.+...+.. .+++.+.++.++.||+||||||++|..++.++.. ..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~----~~~v~~~~~~~~~~d~lViATGs~p~~p~~~~~~~~~ 160 (492)
T 3ic9_A 85 KAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLD----EHTLQVDDHSQVIAKRIVIATGSRPNYPEFLAAAGSR 160 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEE----TTEEEETTTEEEEEEEEEECCCEECCCCHHHHTTGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEec----CCEEEEcCCcEEEeCEEEEccCCCCcCCCCCCccCCc
Confidence 11111111 11112 24566777765543 3678888888999999999999999865433322 22
Q ss_pred EEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHHhCCcEEE
Q psy2951 163 VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFV 242 (1466)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~ 242 (1466)
++ +..+...+. ..+++++|||+|++|+|+|..|++.|.+|+++++.+.++ +.+++++.+.+.+.|++. |+++
T Consensus 161 v~---t~~~~~~~~---~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-~~~d~~~~~~l~~~l~~~-V~i~ 232 (492)
T 3ic9_A 161 LL---TNDNLFELN---DLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA-NLQDEEMKRYAEKTFNEE-FYFD 232 (492)
T ss_dssp EE---CHHHHTTCS---SCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT-TCCCHHHHHHHHHHHHTT-SEEE
T ss_pred EE---cHHHHhhhh---hcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc-ccCCHHHHHHHHHHHhhC-cEEE
Confidence 32 445544433 347899999999999999999999999999999998776 568899999999999988 9999
Q ss_pred cCceEEEEEecCCCCeEEEEc--CCC--cEEeccEEEEeeccccCccc--cccCCceecCCccEEEC-CCCCcCCCCEEE
Q psy2951 243 MKANVSSFEKNEKNDVTAANL--DNG--TTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVN-EYLETNVPGVYA 315 (1466)
Q Consensus 243 ~~~~v~~i~~~~~~~~~~v~~--~~g--~~i~~D~Vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd-~~~~t~~~~iya 315 (1466)
+++.+++++.+++ .+. +.+ .+| +++++|.||+|+|++|++++ ++..|++++++|+|.|| ++++|+.|+|||
T Consensus 233 ~~~~v~~i~~~~~-~v~-v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA 310 (492)
T 3ic9_A 233 AKARVISTIEKED-AVE-VIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHIFV 310 (492)
T ss_dssp TTCEEEEEEECSS-SEE-EEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTEEE
T ss_pred ECCEEEEEEEcCC-EEE-EEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCCEEE
Confidence 9999999987543 333 444 366 68999999999999999998 78889999999999999 999999999999
Q ss_pred ecccccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCC----CCCCCCCcccccccceeeEEEEeecCC---------
Q psy2951 316 GGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK----TSLSTIPFFWTMLFGVGFRFAGYAAGH--------- 382 (1466)
Q Consensus 316 ~GD~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~----~~~~~~p~~~s~~~~~~~~~~G~~~~~--------- 382 (1466)
+|||+..+ ..+..|..||+.+|.|+++.. ..+..+|+ .......+..+|.+...
T Consensus 311 ~GD~~~~~-----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~--~~~~~p~~a~vGlte~~a~~~~g~~~ 377 (492)
T 3ic9_A 311 AGDANNTL-----------TLLHEAADDGKVAGTNAGAYPVIAQGQRRAPLS--VVFTEPQVASVGLSLRQIEDLYADQD 377 (492)
T ss_dssp CGGGGTSS-----------CSHHHHHHHHHHHHHHHHHTTSCCEECCCCCEE--EECSSSEEEEEESCHHHHHHHCSCSS
T ss_pred EEecCCCC-----------ccHHHHHHHHHHHHHHHcCCCCCcccCCCCCcE--EEECCCCeEEecCCHHHHHhccCccC
Confidence 99998754 346689999999999999732 12344442 11122334455544311
Q ss_pred -ceEEE-----ec------ccCCCeEEEEEEc--CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc-----ccccCcccc
Q psy2951 383 -TQVDI-----VG------DLEALKFTAYYSN--ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS-----LPHSHRCLG 441 (1466)
Q Consensus 383 -~~~~~-----~g------~~~~~~~~~~~~~--~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~-----~~~~~p~~~ 441 (1466)
..+.. .. .-+..+|.+++.+ +++|+|++++|. +.+++.++ .+|+++.+. ++++|||++
T Consensus 378 g~~~~~~~~~~~~~~~a~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~-~ai~~~~t~~~l~~~~~~hPt~~ 456 (492)
T 3ic9_A 378 AANYVVGQVSFEGQGRSRVMGKNKGLLNVYADRTSGEFLGAEMFGPAAEHIGHLLA-WARQQQMTVQAMLTMPFYHPVIE 456 (492)
T ss_dssp SCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHH-HHHHTTCBHHHHTTSCCCTTCTH
T ss_pred CccEEEEEEEeccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCCHHHHhhCCCCCCChH
Confidence 11111 00 0135689998886 489999999998 45666666 999999876 799999999
Q ss_pred hhh
Q psy2951 442 VVL 444 (1466)
Q Consensus 442 e~~ 444 (1466)
|.+
T Consensus 457 e~~ 459 (492)
T 3ic9_A 457 EGL 459 (492)
T ss_dssp HHH
T ss_pred HHH
Confidence 998
No 83
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=5.8e-34 Score=351.06 Aligned_cols=347 Identities=19% Similarity=0.250 Sum_probs=261.2
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCc--------------------cchhcc-------cC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK--------------------LSKQLD-------IK 646 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~--------------------~~~~~~-------~~ 646 (1466)
..+||+||||||||++||+.|+++|++ |+++|++. +++.... ....++ .+
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~--V~liE~~~-~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGAR--AAVVESHK-LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFN 95 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCC--EEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCe--EEEEecCC-CCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccC
Confidence 458999999999999999999999988 77888663 2211000 000000 01
Q ss_pred cc-----------cccccCHhHhhhCCcEEEEceEEEEeccccccEEEccCCCEEecCEEEEcCCCCCCcC---CCCCCC
Q psy2951 647 AD-----------SILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTI---SQADGV 712 (1466)
Q Consensus 647 ~~-----------~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~---~~~~g~ 712 (1466)
.. .+.......++..+++++.++ +..+ +...+.+. .++.++.||+||||||++|+.| +++ |.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~~-~~~~~~v~-~~g~~~~~d~lviAtG~~p~~p~~~~i~-G~ 171 (478)
T 3dk9_A 96 WRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH-AAFT-SDPKPTIE-VSGKKYTAPHILIATGGMPSTPHESQIP-GA 171 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEEC-SCSSCEEE-ETTEEEECSCEEECCCEEECCCCTTTST-TG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEe-eCCeEEEE-ECCEEEEeeEEEEccCCCCCCCCcCCCC-CC
Confidence 11 111222344567799999998 6666 66666776 4677899999999999999999 888 87
Q ss_pred CcEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcE
Q psy2951 713 NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVK 792 (1466)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~ 792 (1466)
+. ..+.++...+. ..+++++|||+|++|+|+|..|++.|.+|+++++.++++ +.+++++.+.+.+.|+++||+
T Consensus 172 ~~---~~~~~~~~~~~---~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-~~~d~~~~~~~~~~l~~~gv~ 244 (478)
T 3dk9_A 172 SL---GITSDGFFQLE---ELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL-RSFDSMISTNCTEELENAGVE 244 (478)
T ss_dssp GG---SBCHHHHTTCC---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-TTSCHHHHHHHHHHHHHTTCE
T ss_pred ce---eEchHHhhchh---hcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc-cccCHHHHHHHHHHHHHCCCE
Confidence 62 23444443332 348999999999999999999999999999999998877 678999999999999999999
Q ss_pred EEccceEEEEEecCCCceEEEECCC-------CcEEecCEEEEccccccCcc-c-cccCCceeeCCCcEEeCCCCCCCCC
Q psy2951 793 FVMKANVSSFEKNEKNDVTAANLDN-------GTTIPADLVIVGIGTVLNTN-Y-LDGKGVELNGQKAVVVNEYLETNVP 863 (1466)
Q Consensus 793 ~~~~~~v~~i~~~~~~~~~~v~~~~-------g~~i~~D~vi~a~G~~p~~~-~-~~~~gl~~~~~G~i~vd~~~~t~~~ 863 (1466)
+++++.+++++..+++....+.+.+ |+++++|.||+|+|++|+++ + ++.+|++++++|+|.||++++|+.|
T Consensus 245 i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~ 324 (478)
T 3dk9_A 245 VLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVK 324 (478)
T ss_dssp EETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBCSST
T ss_pred EEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCcccCCC
Confidence 9999999999854444233566654 25799999999999999987 4 6888999999999999999999999
Q ss_pred CeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCC----CcCcccCeeeeeecCceeEEeeccCCC-----
Q psy2951 864 GVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK----TSLSTIPFFWTMLFGVGFRFAGYAAGH----- 934 (1466)
Q Consensus 864 ~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~----- 934 (1466)
+|||+|||+..+. .++.|..||+.+|.+|++.. ..+..+|+ ..++...+..+|+++..
T Consensus 325 ~IyA~GD~~~~~~-----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~--~~~~~p~~a~vGlte~~a~~~~ 391 (478)
T 3dk9_A 325 GIYAVGDVCGKAL-----------LTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPT--VVFSHPPIGTVGLTEDEAIHKY 391 (478)
T ss_dssp TEEECGGGGCSSC-----------CHHHHHHHHHHHHHHHHSCCTTCCCCCTTCCE--EECCSSCEEEEECCHHHHHHHH
T ss_pred CEEEEEecCCCCc-----------cHhHHHHHHHHHHHHHcCCCCcccCCCCCCCe--EEECCCceEEeeCCHHHHHhhC
Confidence 9999999996554 34789999999999999862 23556663 23455668888877521
Q ss_pred --CceeEe-----c------ccccceEEEEEe--cCCeEEEEEeecCc
Q psy2951 935 --TQVDIV-----G------DLEALKFTAYYS--NADKVLAILTVGMD 967 (1466)
Q Consensus 935 --~~~~~~-----~------~~~~~~~~~~~~--~~~~i~g~~~~g~~ 967 (1466)
.+.... . .-++..|+|+++ ++++++|++++|..
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~ 439 (478)
T 3dk9_A 392 GIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLG 439 (478)
T ss_dssp CGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTT
T ss_pred CCccEEEEEeecCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCC
Confidence 111100 0 113467899987 57999999999976
No 84
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=4.1e-35 Score=358.93 Aligned_cols=295 Identities=18% Similarity=0.305 Sum_probs=239.7
Q ss_pred CCCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc--cCcccccccChh--hhccCCcEEEcC
Q psy2951 1064 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD--IKADSILLRTEE--FYKDNDIHVIKG 1139 (1466)
Q Consensus 1064 ~~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~--~~~~~~v~~~~~ 1139 (1466)
.++++|||||||+||+++|..|++.++ +|||||+++++.|. |.|..... .+...+..+... ...+.+++++.+
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~--~VtLId~~~~~~~~-PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~ 116 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKY--NVSIISPRSYFLFT-PLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEA 116 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTC--EEEEEESSSEEECG-GGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCC--cEEEECCCCCcccc-cchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEE
Confidence 346799999999999999999999888 99999999987663 44443322 222332222222 224458999887
Q ss_pred CeEEEeecCCCCeEEec--------------------CCcEEecCeEEEecCCCCCcCCCCCCCC-cEEEecCHHHHHhh
Q psy2951 1140 KKIISDSELNEKKIKLQ--------------------DGTSIDFTKIYLATGSSPRTISQADGVN-KVFYLRTVEDANNI 1198 (1466)
Q Consensus 1140 ~~v~~i~d~~~~~v~~~--------------------~g~~~~yd~lvlAtG~~~~~~~~~~g~~-~v~~~~~~~~~~~l 1198 (1466)
. |+.| |+++++|++. ++.+++||+||||||++|+.+++| |++ +.+.+++++|+.++
T Consensus 117 ~-v~~I-D~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ip-G~~e~a~~l~t~~dA~~i 193 (502)
T 4g6h_A 117 E-ATSI-NPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIP-GVTDYGHFLKEIPNSLEI 193 (502)
T ss_dssp E-EEEE-EGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCT-THHHHCEECSSHHHHHHH
T ss_pred E-EEEE-EhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCcc-CcccccCCCCCHHHHHHH
Confidence 6 9999 9999999864 366899999999999999999999 877 77889999999888
Q ss_pred hcccC-----------------CCCeEEEEcCCHHHHHHHHHHhcC--------------CCeEEEEcCCCcCCcccccH
Q psy2951 1199 APHIT-----------------PESNVVVIGSSFIGMEAAAFCASK--------------VKSVTVVGRGAVPFQESLGK 1247 (1466)
Q Consensus 1199 ~~~~~-----------------~~~~vvVvG~g~~g~e~a~~l~~~--------------g~~v~vv~~~~~~~~~~~~~ 1247 (1466)
++.+. ...+++|||+|++|+|+|..|++. ..+|+++++.++.++ .+++
T Consensus 194 r~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~-~~~~ 272 (502)
T 4g6h_A 194 RRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLN-MFEK 272 (502)
T ss_dssp HHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSST-TSCH
T ss_pred HHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccccc-CCCH
Confidence 76531 124799999999999999988754 368999999999886 6899
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCC----eeecCEEEEeeccccCc---cccccCCceeeCC
Q psy2951 1248 EVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGT----TIPADLVIVGIGTVLNT---NYLDGKGVELNGQ 1320 (1466)
Q Consensus 1248 ~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~----~i~~D~vv~a~G~~p~~---~~~~~~gl~~~~~ 1320 (1466)
++++.+.+.|+++||+++++++|++++ +++....+.+.||+ ++++|+||+|+|..|+. ++....++..+.+
T Consensus 273 ~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~ 350 (502)
T 4g6h_A 273 KLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSK 350 (502)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCC
Confidence 999999999999999999999999997 44455566777874 69999999999999983 3555566777778
Q ss_pred CeEEeCCCccc-cCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcC
Q psy2951 1321 KAVVVNEYLET-NVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVE 1376 (1466)
Q Consensus 1321 G~i~vd~~~~t-~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g 1376 (1466)
|+|.||++||+ ++|||||+||||..|.+. ..+.|.+||+.+|+||.+
T Consensus 351 g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p~---------~a~~A~qqg~~~A~ni~~ 398 (502)
T 4g6h_A 351 RGLAVNDFLQVKGSNNIFAIGDNAFAGLPP---------TAQVAHQEAEYLAKNFDK 398 (502)
T ss_dssp SSEEBCTTSBBTTCSSEEECGGGEESSSCC---------CHHHHHHHHHHHHHHHHH
T ss_pred CceeECCccccCCCCCEEEEEcccCCCCCC---------chHHHHHHHHHHHHHHHH
Confidence 89999999999 599999999999887654 248899999999999964
No 85
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=5.9e-34 Score=351.66 Aligned_cols=372 Identities=18% Similarity=0.240 Sum_probs=260.9
Q ss_pred CcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCC---CCC-Cchhh----------------cc------Cc--
Q psy2951 1067 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD---RVK-LSKQL----------------DI------KA-- 1118 (1466)
Q Consensus 1067 ~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~---~~~-l~~~~----------------~~------~~-- 1118 (1466)
++|+|||||+||++||..|++.|. +|+|||+++ .+.. +.. .++.+ .. ..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~g~--~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 79 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARHNA--KVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPL 79 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC--CEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHH
T ss_pred cCEEEECCCHHHHHHHHHHHHCCC--cEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHH
Confidence 689999999999999999999988 999999985 2100 000 00000 00 00
Q ss_pred ---------ccccccChhhhccCCcEEEcCCeEEEeecCCCCeEEecC-------------CcEEecCeEEEecCCCCCc
Q psy2951 1119 ---------DSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQD-------------GTSIDFTKIYLATGSSPRT 1176 (1466)
Q Consensus 1119 ---------~~~~~~~~~~~~~~~v~~~~~~~v~~i~d~~~~~v~~~~-------------g~~~~yd~lvlAtG~~~~~ 1176 (1466)
..+.....+++++.+++++.++ +..+ |+ ++|.+.+ +.++.||+||+|||++|+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i-d~--~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~ 155 (500)
T 1onf_A 80 LVERRDKYIQRLNNIYRQNLSKDKVDLYEGT-ASFL-SE--NRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVF 155 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-CCCC-----------------------------CBSSEEECCCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe-eC--CEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCC
Confidence 0000011234456799999887 5566 64 4565544 6689999999999999999
Q ss_pred CCCCCCCCcEEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHH
Q psy2951 1177 ISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKL 1256 (1466)
Q Consensus 1177 ~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~ 1256 (1466)
|++| |.+.++ +.+++.++. . +++++|||+|++|+|+|..|++.|.+|+++++.+++++ .+++++.+.+.+.
T Consensus 156 p~i~-G~~~~~---~~~~~~~~~---~-~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-~~d~~~~~~l~~~ 226 (500)
T 1onf_A 156 PPVK-GIENTI---SSDEFFNIK---E-SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR-KFDESVINVLEND 226 (500)
T ss_dssp CSCT-TGGGCE---EHHHHTTCC---C-CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT-TSCHHHHHHHHHH
T ss_pred CCCC-CCCccc---CHHHHhccC---C-CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc-ccchhhHHHHHHH
Confidence 9898 875433 345554432 2 78999999999999999999999999999999998885 6889999999999
Q ss_pred HHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCe-eecCEEEEeeccccCcc-c-cccCCceeeCCCeEEeCCCccccC
Q psy2951 1257 FESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTT-IPADLVIVGIGTVLNTN-Y-LDGKGVELNGQKAVVVNEYLETNV 1333 (1466)
Q Consensus 1257 ~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~-i~~D~vv~a~G~~p~~~-~-~~~~gl~~~~~G~i~vd~~~~t~~ 1333 (1466)
++++||+++++++|++++ .+++....|.+.+|++ +++|.||+|+|..|+++ + ++.+|+.+ .+|+|.||+++||+.
T Consensus 227 l~~~gv~i~~~~~v~~i~-~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~-~~G~i~vd~~~~t~~ 304 (500)
T 1onf_A 227 MKKNNINIVTFADVVEIK-KVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVET-NNNYIVVDENQRTSV 304 (500)
T ss_dssp HHHTTCEEECSCCEEEEE-ESSTTCEEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCB-SSSCEEECTTCBCSS
T ss_pred HHhCCCEEEECCEEEEEE-EcCCceEEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccc-cCCEEEECCCcccCC
Confidence 999999999999999998 3322334688889988 99999999999999997 5 68889998 688999999999999
Q ss_pred CCEEEecccccCCCcc-----------------------CCCceeeeecHHHHHHHHHHHHHHhcCCCC---CCCCCccc
Q psy2951 1334 PGVYAGGDIAYAPLHS-----------------------FYNKNASIGHYQLAQYHGRIAALNMVEKKT---SLSTIPFF 1387 (1466)
Q Consensus 1334 ~~v~a~GD~a~~p~~~-----------------------~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~---~~~~~p~~ 1387 (1466)
|+|||+|||+..+... ..+...+...|+.|..||+.||+||+|... .|..+|+.
T Consensus 305 ~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~ 384 (500)
T 1onf_A 305 NNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKTRKTNYKLIPTV 384 (500)
T ss_dssp SSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHSCTTCCCCCSSCCEE
T ss_pred CCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCCCccCCCCCCCeE
Confidence 9999999999543110 000012457899999999999999998542 35667743
Q ss_pred eeccccccEEEEeeCC-----CC--ceEEEc---------------CCcCCceEEEEEE--eCCEEEEEEEecCcHH--H
Q psy2951 1388 WTMLFGVGFRFAGYAA-----GH--TQVDIV---------------GDLEALKFTAYYS--NADKVLAILTVGMDPL--A 1441 (1466)
Q Consensus 1388 w~~~~~~~~~~~g~~~-----~~--~~~~~~---------------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~ 1441 (1466)
..++..+..+|..+ .. .++.+. ...++..|++..+ ++++|+|+..+|.... +
T Consensus 385 --~~~~~~~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i 462 (500)
T 1onf_A 385 --IFSHPPIGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIGLNADEIV 462 (500)
T ss_dssp --ECCSSCEEEEECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEEEEETTTTEEEEEEEESTTHHHHH
T ss_pred --EEcCcceEEEeCCHHHHHhcCCCccEEEEEEECchhhhhhccccccCCCceEEEEEEECCCCEEEEEEEECCCHHHHH
Confidence 33456788888752 11 223221 1113456887777 4689999999998522 3
Q ss_pred HHHHHHHHcCCCCChhccc
Q psy2951 1442 AQFAERIKMQKYIQKDQIE 1460 (1466)
Q Consensus 1442 ~~~~~~~~~~~~~~~~~~~ 1460 (1466)
..+.-+|+.+ .+.++|+
T Consensus 463 ~~~~~ai~~~--~t~~~l~ 479 (500)
T 1onf_A 463 QGFAVALKMN--ATKKDFD 479 (500)
T ss_dssp HHHHHHHHTT--CBHHHHH
T ss_pred HHHHHHHHcC--CCHHHHh
Confidence 3333345555 4445553
No 86
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=3.2e-34 Score=351.05 Aligned_cols=373 Identities=23% Similarity=0.295 Sum_probs=269.0
Q ss_pred CcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCC----Cccchh-----------------c-----ccCccc
Q psy2951 44 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDR----VKLSKQ-----------------L-----DIKADS 97 (1466)
Q Consensus 44 ~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~~----~~~~~~-----------------~-----~~~~~~ 97 (1466)
+||+||||||||++||..|++.|.++.|++.++ ...... +..++. + ..+..+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~--~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 79 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEK--ALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPA 79 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS--SSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCC--CCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHH
Confidence 699999999999999999999999887765432 211000 000000 0 001111
Q ss_pred c-----------cccChhhhhcCCeEEEeCceEEEeccccccEEEec-CCcEEecCEEEEccCCCCCCCCCCCCCCcEEE
Q psy2951 98 I-----------LLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQ-DGTSIDFTKIYLATGSSPRTISQADGVNKVFY 165 (1466)
Q Consensus 98 ~-----------~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~-~~~~~~~d~lviAtG~~~~~~~~~~~~~~~~~ 165 (1466)
+ ...+..++++.+++++.++.+.. +. .++.+. ++.++.||+||+|||++|..++.. +.+...
T Consensus 80 ~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i--~~--~~~~v~~~g~~~~~d~lviAtG~~p~~~~~~-g~~~~~- 153 (455)
T 2yqu_A 80 LMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFL--SE--RKVLVEETGEELEARYILIATGSAPLIPPWA-QVDYER- 153 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEES--SS--SEEEETTTCCEEEEEEEEECCCEEECCCTTB-CCCSSS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEe--cC--CeEEEeeCCEEEEecEEEECCCCCCCCCCCC-CCCcCc-
Confidence 1 11123456677999999987642 33 334443 567899999999999998866533 332201
Q ss_pred ecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHHhCCcEEEcCc
Q psy2951 166 LRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKA 245 (1466)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~ 245 (1466)
+.+..+...+. ..+++++|||+|++|+|+|..|++.|.+|+++++.+.++ +.+++++.+.+.+.+++.||++++++
T Consensus 154 v~~~~~~~~~~---~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l-~~~~~~~~~~l~~~l~~~Gv~i~~~~ 229 (455)
T 2yqu_A 154 VVTSTEALSFP---EVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL-PTMDLEVSRAAERVFKKQGLTIRTGV 229 (455)
T ss_dssp EECHHHHTCCS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-TTSCHHHHHHHHHHHHHHTCEEECSC
T ss_pred EechHHhhccc---cCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc-cccCHHHHHHHHHHHHHCCCEEEECC
Confidence 12445554433 235899999999999999999999999999999988766 46789999999999999999999999
Q ss_pred eEEEEEecCCCCeEEEEcCCCcEEeccEEEEeeccccCccc--cccCCceecCCccEEECCCCCcCCCCEEEeccccccc
Q psy2951 246 NVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAP 323 (1466)
Q Consensus 246 ~v~~i~~~~~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~ 323 (1466)
+|++++.+++ ...+.+++++++++|.||+|+|++|++++ ++..|++++++|+|.||++++|+.|+|||+|||+..+
T Consensus 230 ~V~~i~~~~~--~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~ 307 (455)
T 2yqu_A 230 RVTAVVPEAK--GARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRTRVPHIYAIGDVVRGP 307 (455)
T ss_dssp CEEEEEEETT--EEEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBCSSTTEEECGGGSSSC
T ss_pred EEEEEEEeCC--EEEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCcccCCCCEEEEecCCCCc
Confidence 9999987542 23456677889999999999999999987 6778888888899999999999999999999998754
Q ss_pred CccCCCCcceeccHHHHHHHHHHHHHHhcCCCCCC--CCCCcccccccceeeEEEEeecCC-----ceEEEec-------
Q psy2951 324 LHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTSL--STIPFFWTMLFGVGFRFAGYAAGH-----TQVDIVG------- 389 (1466)
Q Consensus 324 ~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~~~~--~~~p~~~s~~~~~~~~~~G~~~~~-----~~~~~~g------- 389 (1466)
..+..|..||+.+|.||++....+ ..+|+ ....+..+..+|..... .++....
T Consensus 308 -----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~--~~~~~~~~a~~G~~~~~a~~~g~~~~~~~~~~~~~~ 374 (455)
T 2yqu_A 308 -----------MLAHKASEEGIAAVEHMVRGFGHVDYQAIPS--VVYTHPEIAAVGYTEEELKAQGIPYKVGKFPYSASG 374 (455)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHHSCCCCCGGGCCE--EECSSSEEEEEECCHHHHHHHTCCEEEEEEEGGGCH
T ss_pred -----------cCHHHHHHhHHHHHHHHcCCCccCCCCCCCE--EEEcCCceEEEECCHHHHHHcCCCEEEEEEEcccch
Confidence 346689999999999999864433 33442 22223345555543211 1111110
Q ss_pred ----ccCCCeEEEEEEc--CCEEEEEEEECC--CHHHHHHHHHHhcCCCcc-----ccccCcccchhh
Q psy2951 390 ----DLEALKFTAYYSN--ADKVLAILTVGM--DPLAAQFAEQVLEFPYSS-----LPHSHRCLGVVL 444 (1466)
Q Consensus 390 ----~~~~~~~~~~~~~--~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~~-----~~~~~p~~~e~~ 444 (1466)
.-+..+|.+++.+ +++|+|++++|. ++++..++ .+|+.+.+. ++++|||++|.+
T Consensus 375 ~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~-~ai~~~~~~~~~~~~~~~~Pt~~e~~ 441 (455)
T 2yqu_A 375 RARAMGETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAA-LALFFKASAEDLGRAPHAHPSLSEIL 441 (455)
T ss_dssp HHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHH-HHHHTTCBHHHHHHSCCCSSCTHHHH
T ss_pred HHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH-HHHHCCCCHHHHhhcccCCCCHHHHH
Confidence 1135678888886 689999999997 35666666 899998876 799999999988
No 87
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=7.8e-34 Score=346.96 Aligned_cols=361 Identities=21% Similarity=0.280 Sum_probs=267.8
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCC----CCchhh----------------cc-------Cc
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRV----KLSKQL----------------DI-------KA 1118 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~----~l~~~~----------------~~-------~~ 1118 (1466)
+++|+|||||+||+++|..|++.|. +|+|||+++ ++.... ..++.+ .. ..
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~--~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 80 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGK--RVALIESKA-LGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDW 80 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC--CEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCC--cEEEEcCCC-CCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCH
Confidence 4689999999999999999999988 999999973 221000 000000 00 00
Q ss_pred c-----------cccccChhhhccCCcEEEcCCeEEEeecCCCCeEEecCCcEEecCeEEEecCCCCCcCCCCCCCCcEE
Q psy2951 1119 D-----------SILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVF 1187 (1466)
Q Consensus 1119 ~-----------~~~~~~~~~~~~~~v~~~~~~~v~~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~~v~ 1187 (1466)
. .+.......+.+.+++++.++ +..+ +. ++|.+ ++.++.||+||+|||++|+.|++| |.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i-~~--~~v~~-~g~~~~~d~lviAtGs~p~~p~i~-G~~~-- 152 (463)
T 2r9z_A 81 PRLVAGRDRYIGAINSFWDGYVERLGITRVDGH-ARFV-DA--HTIEV-EGQRLSADHIVIATGGRPIVPRLP-GAEL-- 152 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEEE-ET--TEEEE-TTEEEEEEEEEECCCEEECCCSCT-TGGG--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeE-EEEc-cC--CEEEE-CCEEEEcCEEEECCCCCCCCCCCC-Cccc--
Confidence 0 000001123456799999987 7778 64 57887 777899999999999999999898 7643
Q ss_pred EecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcC
Q psy2951 1188 YLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMK 1267 (1466)
Q Consensus 1188 ~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~ 1267 (1466)
..+.+++..+. ..+++++|||+|++|+|+|..|++.|.+|+++++.+.++. .+++++.+.+.+.++++||+++++
T Consensus 153 -~~~~~~~~~~~---~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gv~i~~~ 227 (463)
T 2r9z_A 153 -GITSDGFFALQ---QQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF-QFDPLLSATLAENMHAQGIETHLE 227 (463)
T ss_dssp -SBCHHHHHHCS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHTTCEEESS
T ss_pred -eecHHHHhhhh---ccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc-ccCHHHHHHHHHHHHHCCCEEEeC
Confidence 23556665543 3478999999999999999999999999999999988875 578999999999999999999999
Q ss_pred ceEEEEEecCCCcEEEEEcCCCC-eeecCEEEEeeccccCccc--cccCCceeeCCCeEEeCCCccccCCCEEEeccccc
Q psy2951 1268 ANVSSFEKNEKNDVTAANLDNGT-TIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAY 1344 (1466)
Q Consensus 1268 ~~v~~i~~~~~g~~~~v~l~~g~-~i~~D~vv~a~G~~p~~~~--~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~ 1344 (1466)
++|++++ .+++. ..|.+.+|+ ++++|.||+|+|..|++++ ++.+|+.++.+|+|.||++++|+.|+|||+|||+.
T Consensus 228 ~~v~~i~-~~~~~-~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~ 305 (463)
T 2r9z_A 228 FAVAALE-RDAQG-TTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTNVPGVYALGDITG 305 (463)
T ss_dssp CCEEEEE-EETTE-EEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBCSSTTEEECGGGGT
T ss_pred CEEEEEE-EeCCe-EEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCccCCCCEEEEeecCC
Confidence 9999998 33222 568889998 8999999999999999984 56789999888999999999999999999999986
Q ss_pred CCCccCCCceeeeecHHHHHHHHHHHHHHhcCCC----CCCCCCccceeccccccEEEEeeCC-----C-CceEEEc---
Q psy2951 1345 APLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK----TSLSTIPFFWTMLFGVGFRFAGYAA-----G-HTQVDIV--- 1411 (1466)
Q Consensus 1345 ~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~----~~~~~~p~~w~~~~~~~~~~~g~~~-----~-~~~~~~~--- 1411 (1466)
.+. .|+.|..||+.||.||+|.. ..|..+|++. ..+..+-.+|..+ . ..++.+.
T Consensus 306 ~~~-----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~--~~~~~~a~vGl~e~~a~~~~g~~~~~~~~~ 372 (463)
T 2r9z_A 306 RDQ-----------LTPVAIAAGRRLAERLFDGQSERKLDYDNIPTVV--FAHPPLSKVGLSEPEARERLGDVLTVYETS 372 (463)
T ss_dssp SCC-----------CHHHHHHHHHHHHHHHHSCCTTCCCCCSSCCEEE--CCSSCEEEEECCHHHHHHHHCSCEEEEEEE
T ss_pred Ccc-----------cHHHHHHHHHHHHHHHcCCCCcccCCCCCCCEEE--eCCCCeEEEcCCHHHHHhcCCCCEEEEEEE
Confidence 543 34889999999999999854 2456777542 2345677777642 0 1222221
Q ss_pred --------CCcCCceEEEEEEe--CCEEEEEEEecCcH--HHHHHHHHHHcCCCCChhcc
Q psy2951 1412 --------GDLEALKFTAYYSN--ADKVLAILTVGMDP--LAAQFAERIKMQKYIQKDQI 1459 (1466)
Q Consensus 1412 --------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 1459 (1466)
-+.++..|++.+++ +++|+|+..+|... .+..+.-+|+.+ ++.++|
T Consensus 373 ~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~--~t~~~l 430 (463)
T 2r9z_A 373 FTPMRYALNEHGPKTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMG--ATKADF 430 (463)
T ss_dssp ECCGGGTTSSSCCCEEEEEEEETTTTEEEEEEEESTTGGGTSHHHHHHHHTT--CBHHHH
T ss_pred cccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCC--CCHHHH
Confidence 01134568877775 78999999999842 233444455555 344444
No 88
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=1.3e-33 Score=345.99 Aligned_cols=367 Identities=16% Similarity=0.236 Sum_probs=276.4
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCC----Cchhhc------------------cCcc----
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK----LSKQLD------------------IKAD---- 1119 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~----l~~~~~------------------~~~~---- 1119 (1466)
.++|+|||||+||++||..|++.|. +|+|||+++.++..... .++.+. ....
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~--~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~ 81 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKY--NVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQD 81 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC--CEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCC--eEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHH
Confidence 3689999999999999999999998 99999977654421000 000000 0000
Q ss_pred ------ccc--ccChhhhccCCcEEEcCCeEEEeecCCCCeEEecCCcE--EecCeEEEecCCCCCcCCCCCCCCcEEEe
Q psy2951 1120 ------SIL--LRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTS--IDFTKIYLATGSSPRTISQADGVNKVFYL 1189 (1466)
Q Consensus 1120 ------~~~--~~~~~~~~~~~v~~~~~~~v~~i~d~~~~~v~~~~g~~--~~yd~lvlAtG~~~~~~~~~~g~~~v~~~ 1189 (1466)
.+. .....++.+.+++++.++ +..+ |+....|.+.+|.. +.||+||+|||++|+.|++| |.++ +
T Consensus 82 ~~~~~~~l~~~~~~~~~~~~~~v~~~~g~-v~~i-d~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~i~-G~~~---~ 155 (466)
T 3l8k_A 82 RKDYVQELRFKQHKRNMSQYETLTFYKGY-VKIK-DPTHVIVKTDEGKEIEAETRYMIIASGAETAKLRLP-GVEY---C 155 (466)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEEESEE-EEEE-ETTEEEEEETTSCEEEEEEEEEEECCCEEECCCCCT-TGGG---S
T ss_pred HHHhheeccccchHHHHHHhCCCEEEEeE-EEEe-cCCeEEEEcCCCcEEEEecCEEEECCCCCccCCCCC-Cccc---e
Confidence 000 112235567799999885 9999 98877888888888 99999999999999999999 8774 4
Q ss_pred cCHHHHHhhhcccC-CCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCc
Q psy2951 1190 RTVEDANNIAPHIT-PESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKA 1268 (1466)
Q Consensus 1190 ~~~~~~~~l~~~~~-~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~ 1268 (1466)
.+.+++.++++.+. .+++++|||+|++|+|+|..|++.|.+|+++++.+++++..+++++.+.+.+.++ |++++++
T Consensus 156 ~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~ 232 (466)
T 3l8k_A 156 LTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSILK---LNIKFNS 232 (466)
T ss_dssp BCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC---CCEECSC
T ss_pred EeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEECC
Confidence 46677765554333 4799999999999999999999999999999999988875558999998888776 9999999
Q ss_pred eEEEEEecCC-CcEEEEEcC--CCC--eeecCEEEEeeccccCccc-cccCCceeeCCCeEEeCCCccccCCCEEEeccc
Q psy2951 1269 NVSSFEKNEK-NDVTAANLD--NGT--TIPADLVIVGIGTVLNTNY-LDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 1342 (1466)
Q Consensus 1269 ~v~~i~~~~~-g~~~~v~l~--~g~--~i~~D~vv~a~G~~p~~~~-~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~ 1342 (1466)
+|++++ .++ +.+ .+.+. +|+ ++++|.|++|+|..|++++ ++..|+.++++| |.||+++||+.|+|||+|||
T Consensus 233 ~v~~i~-~~~~~~v-~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~~~~G-i~vd~~~~t~~~~Iya~GD~ 309 (466)
T 3l8k_A 233 PVTEVK-KIKDDEY-EVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGLSISKTG-IVVDETMKTNIPNVFATGDA 309 (466)
T ss_dssp CEEEEE-EEETTEE-EEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGGTCCBCSSS-BCCCTTCBCSSTTEEECGGG
T ss_pred EEEEEE-EcCCCcE-EEEEEecCCceEEEEcCEEEECcCCCcccccchhhcCceeCCCC-EeECCCccCCCCCEEEEEec
Confidence 999998 332 333 47777 676 7999999999999999995 788999999888 99999999999999999999
Q ss_pred ccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCC--CC---CCCCCccceeccccccEEEEeeCC------CCceEEEc
Q psy2951 1343 AYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEK--KT---SLSTIPFFWTMLFGVGFRFAGYAA------GHTQVDIV 1411 (1466)
Q Consensus 1343 a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~--~~---~~~~~p~~w~~~~~~~~~~~g~~~------~~~~~~~~ 1411 (1466)
+..|.. +..|..||+.||.||+|. .. .+..+| |....+..+-.+|..+ +.+-.+..
T Consensus 310 ~~~~~~-----------~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p--~~~~~~~~~a~vG~te~~a~~~g~~~~~~~ 376 (466)
T 3l8k_A 310 NGLAPY-----------YHAAVRMSIAAANNIMANGMPVDYVDVKSIP--VTIYTIPSLSYVGILPSKARKMGIEIVEAE 376 (466)
T ss_dssp TCSCCS-----------HHHHHHHHHHHHHHHHTTTSCCCCCCSTTSC--EEECSSSCEEEEECCHHHHHHHTCCEEEEE
T ss_pred CCCCcc-----------HhHHHHHHHHHHHHHhCCCCCccccCCCCCc--EEEECCCCeEEecCCHHHHHhCCCCEEEEE
Confidence 987544 378999999999999986 32 344455 4444578888888753 22211211
Q ss_pred C----------CcCCceEEEEEEe--CCEEEEEEEecCcH--HHHHHHHHHHcCCCCChhcccc
Q psy2951 1412 G----------DLEALKFTAYYSN--ADKVLAILTVGMDP--LAAQFAERIKMQKYIQKDQIEN 1461 (1466)
Q Consensus 1412 ~----------~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 1461 (1466)
- ..++..|++.+++ .++++|+..+|... .+..+.-+|+.+ ++.++|++
T Consensus 377 ~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~--~t~~~l~~ 438 (466)
T 3l8k_A 377 YNMEEDVSAQIYGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYG--LNAKQLAS 438 (466)
T ss_dssp EEGGGSHHHHHHTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTT--CBHHHHHH
T ss_pred EEcccChhheecCCCeEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCc--CCHHHHhc
Confidence 0 0124568887775 48999999999852 233444566665 45555533
No 89
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.7e-33 Score=342.00 Aligned_cols=358 Identities=20% Similarity=0.282 Sum_probs=264.5
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCC---CC-CCchhh-------------------c-------
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD---RV-KLSKQL-------------------D------- 1115 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~---~~-~l~~~~-------------------~------- 1115 (1466)
+++|+|||||+||++||..|++.|. +|+|||++. ++.. +. ..++.+ .
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~--~V~lie~~~-~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~ 81 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGI--PTVLVEGQA-LGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPR 81 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTC--CEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC--EEEEEccCC-CCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCc
Confidence 4689999999999999999999998 999999843 2200 00 000000 0
Q ss_pred cCcccccc-----------cChhhhccCCcEEEcCCeEEEeecCCCCeEEecCCcEEecCeEEEecCCCCCcCC-CCCCC
Q psy2951 1116 IKADSILL-----------RTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTIS-QADGV 1183 (1466)
Q Consensus 1116 ~~~~~~~~-----------~~~~~~~~~~v~~~~~~~v~~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~-~~~g~ 1183 (1466)
.+...+.. ...+++++.+++++.++ +..+ +. ++|.+++ .++.||+||||||++|+.|+ ++ .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~~-~~--~~v~v~~-~~~~~d~lviATGs~p~~~~~~~--~ 154 (458)
T 1lvl_A 82 LDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGW-AKVL-DG--KQVEVDG-QRIQCEHLLLATGSSSVELPMLP--L 154 (458)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSC-EEEE-ET--TEEEETT-EEEECSEEEECCCEEECCBTTBC--C
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEE-EEEc-cC--CEEEEee-EEEEeCEEEEeCCCCCCCCCCCC--c
Confidence 00000000 01245667899999998 5557 63 6788876 78999999999999998776 44 2
Q ss_pred CcEEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcE
Q psy2951 1184 NKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVK 1263 (1466)
Q Consensus 1184 ~~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~ 1263 (1466)
++ .+.+.+++..+. ..+++++|||+|++|+|+|..|++.|.+|+++++.+.+++ .+++++.+.+.+.++++||+
T Consensus 155 ~~--~v~~~~~~~~~~---~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gv~ 228 (458)
T 1lvl_A 155 GG--PVISSTEALAPK---ALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP-TYDSELTAPVAESLKKLGIA 228 (458)
T ss_dssp BT--TEECHHHHTCCS---SCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHTCE
T ss_pred cC--cEecHHHHhhhh---ccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHHCCCE
Confidence 32 123566664443 2478999999999999999999999999999999998886 78899999999999999999
Q ss_pred EEcCceEEEEEecCCCcEEEEEcCCC--CeeecCEEEEeeccccCccc--cccCCceeeCCCeEEeCCCccccCCCEEEe
Q psy2951 1264 FVMKANVSSFEKNEKNDVTAANLDNG--TTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAG 1339 (1466)
Q Consensus 1264 ~~~~~~v~~i~~~~~g~~~~v~l~~g--~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~ 1339 (1466)
++++++|++++ . +. ..+...+| +++++|.||+|+|..|++++ ++.+|+.++.+ +|.||++++|+.|+|||+
T Consensus 229 i~~~~~v~~i~-~--~~-v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd~~~~t~~~~Iya~ 303 (458)
T 1lvl_A 229 LHLGHSVEGYE-N--GC-LLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAIDERCQTSMHNVWAI 303 (458)
T ss_dssp EETTCEEEEEE-T--TE-EEEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCCTTCBCSSTTEEEC
T ss_pred EEECCEEEEEE-e--CC-EEEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeECCCCcCCCCCEEEe
Confidence 99999999998 3 33 34554567 68999999999999999986 67889998877 899999999999999999
Q ss_pred cccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCCCC--CCCCccceeccccccEEEEeeCC-----CCceEEEcC
Q psy2951 1340 GDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS--LSTIPFFWTMLFGVGFRFAGYAA-----GHTQVDIVG 1412 (1466)
Q Consensus 1340 GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~~--~~~~p~~w~~~~~~~~~~~g~~~-----~~~~~~~~~ 1412 (1466)
|||+..|.. ++.|..||+.||.||+|...+ +..+|++ ..++..+-.+|..+ ...++.+-.
T Consensus 304 GD~~~~~~~-----------~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~--~~~~p~~a~vG~~e~~a~~~g~~~~~~~ 370 (458)
T 1lvl_A 304 GDVAGEPML-----------AHRAMAQGEMVAEIIAGKARRFEPAAIAAV--CFTDPEVVVVGKTPEQASQQGLDCIVAQ 370 (458)
T ss_dssp GGGGCSSCC-----------HHHHHHHHHHHHHHHTTCCCCCCCSCCCEE--ECSSSEEEEEECCHHHHHHTTCCEEEEE
T ss_pred eccCCCccc-----------HHHHHHHHHHHHHHhcCCCccCCCCCCCEE--EECCCCeEEEeCCHHHHHHcCCCEEEEE
Confidence 999986543 378999999999999996655 4556644 33456666667642 111122100
Q ss_pred -----------CcCCceEEEEEE--eCCEEEEEEEecCc--HHHHHHHHHHHcCCCCChhcc
Q psy2951 1413 -----------DLEALKFTAYYS--NADKVLAILTVGMD--PLAAQFAERIKMQKYIQKDQI 1459 (1466)
Q Consensus 1413 -----------~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 1459 (1466)
.-++..|+++++ ++++|+|+..+|.. ..+..+.-+|+.+. +.++|
T Consensus 371 ~~~~~~~~~~~~~~~~g~~kl~~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~--~~~~l 430 (458)
T 1lvl_A 371 FPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGA--CLEDV 430 (458)
T ss_dssp EEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTGGGHHHHHHHHHHHTC--BHHHH
T ss_pred EECccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCC--CHHHH
Confidence 112356887777 47999999999986 44566666777774 44444
No 90
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=2.4e-33 Score=345.72 Aligned_cols=347 Identities=22% Similarity=0.275 Sum_probs=259.4
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCc----------c-----------------chhcc--
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK----------L-----------------SKQLD-- 644 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~----------~-----------------~~~~~-- 644 (1466)
..+||+||||||||++||+.|+++|++ |+++|+++..+..... . ...++
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~--V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~ 79 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLK--TALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGIS 79 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCC--EEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCE--EEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 368999999999999999999999988 8888887522111000 0 00000
Q ss_pred -----cCcccc-----------cccCHhHhhhCCcEEEEceEEEEeccccccEEEccCC--CEEecCEEEEcCCCCCCcC
Q psy2951 645 -----IKADSI-----------LLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDG--TSIDFTKIYLATGSSPRTI 706 (1466)
Q Consensus 645 -----~~~~~~-----------~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~v~~~~~--~~~~~d~lviAtG~~~~~~ 706 (1466)
.+...+ .......+++.+++++.++ +..+ +.....+...++ .++.||+||||||++|..|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~~-~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~ 157 (476)
T 3lad_A 80 TGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGH-GKLL-AGKKVEVTAADGSSQVLDTENVILASGSKPVEI 157 (476)
T ss_dssp CSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESE-EEEC-STTCEEEECTTSCEEEECCSCEEECCCEEECCC
T ss_pred cCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe-cCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCC
Confidence 000000 0111234556799999998 5556 777777877776 5799999999999999877
Q ss_pred CCCCCCC--cEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHH
Q psy2951 707 SQADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITK 784 (1466)
Q Consensus 707 ~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~ 784 (1466)
+.+ +.+ .++ +..+... ....+++++|||+|++|+|+|..|++.|.+|+++++.+.++ +.+++++.+.+.+
T Consensus 158 ~~~-~~~~~~v~---~~~~~~~---~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-~~~~~~~~~~l~~ 229 (476)
T 3lad_A 158 PPA-PVDQDVIV---DSTGALD---FQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL-PAVDEQVAKEAQK 229 (476)
T ss_dssp TTS-CCCSSSEE---EHHHHTS---CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-TTSCHHHHHHHHH
T ss_pred CCC-CCCcccEE---echhhhc---cccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC-cccCHHHHHHHHH
Confidence 766 444 333 2333332 23458999999999999999999999999999999999877 4789999999999
Q ss_pred HHHhcCcEEEccceEEEEEecCCCceEEEECCCC---cEEecCEEEEccccccCccc--cccCCceeeCCCcEEeCCCCC
Q psy2951 785 LFESKGVKFVMKANVSSFEKNEKNDVTAANLDNG---TTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLE 859 (1466)
Q Consensus 785 ~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g---~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~~~G~i~vd~~~~ 859 (1466)
.+++.||++++++++++++..++ .+ .+.+.++ +++++|.||+|+|++|++++ ++..|++++++|+|.||++++
T Consensus 230 ~l~~~Gv~v~~~~~v~~i~~~~~-~~-~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~ 307 (476)
T 3lad_A 230 ILTKQGLKILLGARVTGTEVKNK-QV-TVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCA 307 (476)
T ss_dssp HHHHTTEEEEETCEEEEEEECSS-CE-EEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSB
T ss_pred HHHhCCCEEEECCEEEEEEEcCC-EE-EEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCcc
Confidence 99999999999999999985433 33 3555443 67999999999999999874 688899999999999999999
Q ss_pred CCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCCCc--CcccCeeeeeecCceeEEeeccCC----
Q psy2951 860 TNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS--LSTIPFFWTMLFGVGFRFAGYAAG---- 933 (1466)
Q Consensus 860 t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~---- 933 (1466)
|+.|+|||+|||+..+. .++.|..||+.||++|+++... +..+|+ ..+++..+..+|+++.
T Consensus 308 t~~~~Iya~GD~~~~~~-----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~--~~~~~~~~a~vGlte~~a~~ 374 (476)
T 3lad_A 308 TSVPGVYAIGDVVRGAM-----------LAHKASEEGVVVAERIAGHKAQMNYDLIPA--VIYTHPEIAGVGKTEQALKA 374 (476)
T ss_dssp CSSTTEEECGGGSSSCC-----------CHHHHHHHHHHHHHHHHHCCCCCCTTCCCE--EECSSSEEEEEECCHHHHHH
T ss_pred cCCCCEEEEEccCCCcc-----------cHHHHHHHHHHHHHHhcCCCcccCCCCCCE--EEECcCCEEEeeCCHHHHHh
Confidence 99999999999996554 3478999999999999987654 445553 3356677888888752
Q ss_pred --CCceeEec----------ccccceEEEEEe--cCCeEEEEEeecCc
Q psy2951 934 --HTQVDIVG----------DLEALKFTAYYS--NADKVLAILTVGMD 967 (1466)
Q Consensus 934 --~~~~~~~~----------~~~~~~~~~~~~--~~~~i~g~~~~g~~ 967 (1466)
.+-....- ..++..|+|+++ ++++++|++++|.+
T Consensus 375 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~ 422 (476)
T 3lad_A 375 EGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVIGPS 422 (476)
T ss_dssp TTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETT
T ss_pred cCCCEEEEEEeccccchheecCCCcEEEEEEEECCCCEEEEEEEECCC
Confidence 11111110 013457899988 46899999999986
No 91
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=3.5e-34 Score=350.75 Aligned_cols=297 Identities=18% Similarity=0.323 Sum_probs=238.6
Q ss_pred CCCCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhc-c-cCcccccccCHhHh--hhCCcEEE
Q psy2951 591 SSGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQL-D-IKADSILLRTEEFY--KDNDIHVI 666 (1466)
Q Consensus 591 ~~~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~--~~~gv~~~ 666 (1466)
..+.+++|||||||+||+++|..|++.+++ |+++++++++.|.+. +.... + .+..++...+.... ++.+++++
T Consensus 38 ~~~~KprVVIIGgG~AGl~~A~~L~~~~~~--VtLId~~~~~~~~Pl-L~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~ 114 (502)
T 4g6h_A 38 QHSDKPNVLILGSGWGAISFLKHIDTKKYN--VSIISPRSYFLFTPL-LPSAPVGTVDEKSIIEPIVNFALKKKGNVTYY 114 (502)
T ss_dssp CSCSSCEEEEECSSHHHHHHHHHSCTTTCE--EEEEESSSEEECGGG-GGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEE
T ss_pred CCCCCCCEEEECCcHHHHHHHHHhhhCCCc--EEEECCCCCcccccc-hhHHhhccccHHHhhhhHHHHHHhhcCCeEEE
Confidence 344578999999999999999999988765 999999987666432 22211 1 34445554444443 34589999
Q ss_pred EceEEEEeccccccEEEcc--------------------CCCEEecCEEEEcCCCCCCcCCCCCCCC-cEEEecCHHHHH
Q psy2951 667 KGKKIISDSELNEKKIKLQ--------------------DGTSIDFTKIYLATGSSPRTISQADGVN-KVFYLRTVEDAN 725 (1466)
Q Consensus 667 ~~~~v~~i~~~~~~~v~~~--------------------~~~~~~~d~lviAtG~~~~~~~~~~g~~-~~~~~~~~~~~~ 725 (1466)
.++ |+.+ |.++++|++. ++.++.||+||||||++|..+++| |.+ +.+.+++++++.
T Consensus 115 ~~~-v~~I-D~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ip-G~~e~a~~l~t~~dA~ 191 (502)
T 4g6h_A 115 EAE-ATSI-NPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIP-GVTDYGHFLKEIPNSL 191 (502)
T ss_dssp EEE-EEEE-EGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCT-THHHHCEECSSHHHHH
T ss_pred EEE-EEEE-EhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCcc-CcccccCCCCCHHHHH
Confidence 987 9999 9998888753 356899999999999999999999 876 778899999887
Q ss_pred hhcccC----------C-------CCCcEEEECCChHHHHHHHHHhccC--------------CeEEEEeecCccCcccc
Q psy2951 726 NIAPHI----------T-------PESNVVVIGSSFIGMEAAAFCASKV--------------KSVTVVGRGAVPFQESL 774 (1466)
Q Consensus 726 ~~~~~~----------~-------~~~~vvVvG~G~~g~e~A~~l~~~g--------------~~V~lv~~~~~~~~~~~ 774 (1466)
.+.+.+ . ...+++|||||++|+|+|..|++++ .+|+++++.++++ +.+
T Consensus 192 ~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il-~~~ 270 (502)
T 4g6h_A 192 EIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL-NMF 270 (502)
T ss_dssp HHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS-TTS
T ss_pred HHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc-cCC
Confidence 765432 1 1247999999999999999887542 6899999999887 579
Q ss_pred CHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCc----EEecCEEEEccccccCc---cccccCCceee
Q psy2951 775 GKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGT----TIPADLVIVGIGTVLNT---NYLDGKGVELN 847 (1466)
Q Consensus 775 ~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~----~i~~D~vi~a~G~~p~~---~~~~~~gl~~~ 847 (1466)
++++++.+.+.|+++||++++++++++++ +++........+|+ +|++|+||||+|.+|+. ++....++..+
T Consensus 271 ~~~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~ 348 (502)
T 4g6h_A 271 EKKLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNS 348 (502)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTT
T ss_pred CHHHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhcccccc
Confidence 99999999999999999999999999998 33334455667764 69999999999999983 34455667777
Q ss_pred CCCcEEeCCCCCC-CCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhcc
Q psy2951 848 GQKAVVVNEYLET-NVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVE 905 (1466)
Q Consensus 848 ~~G~i~vd~~~~t-~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~ 905 (1466)
.+|+|.||++||+ ++|||||+|||+..+.++ .++.|.+||+.+|+||..
T Consensus 349 ~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p~---------~a~~A~qqg~~~A~ni~~ 398 (502)
T 4g6h_A 349 SKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPP---------TAQVAHQEAEYLAKNFDK 398 (502)
T ss_dssp CCSSEEBCTTSBBTTCSSEEECGGGEESSSCC---------CHHHHHHHHHHHHHHHHH
T ss_pred CCCceeECCccccCCCCCEEEEEcccCCCCCC---------chHHHHHHHHHHHHHHHH
Confidence 8899999999998 799999999999876544 778999999999999964
No 92
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=2e-33 Score=347.17 Aligned_cols=346 Identities=21% Similarity=0.284 Sum_probs=257.4
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCcc---------------------chhcc-------cC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKL---------------------SKQLD-------IK 646 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~---------------------~~~~~-------~~ 646 (1466)
++||+||||||||++||..|+++|++ |+++|+.+.+++..... ...++ .+
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~--V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 102 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMK--VAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLN 102 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCC--EEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCe--EEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccC
Confidence 58999999999999999999999988 88888865544311000 00000 00
Q ss_pred ccc-----------ccccCHhHhhhCCcEEEEceEEEEeccccccEEEccCC--CEEecCEEEEcCCCCCCcCCCCCCCC
Q psy2951 647 ADS-----------ILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDG--TSIDFTKIYLATGSSPRTISQADGVN 713 (1466)
Q Consensus 647 ~~~-----------~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~v~~~~~--~~~~~d~lviAtG~~~~~~~~~~g~~ 713 (1466)
... +.......+++.+++++.++ +..+ +.....+.+.++ .++.||+||||||++|. ++| |.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~~-~~~~~~v~~~~g~~~~~~~d~lViATGs~p~--~ip-g~~ 177 (491)
T 3urh_A 103 LQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGT-GKVL-GQGKVSVTNEKGEEQVLEAKNVVIATGSDVA--GIP-GVE 177 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEEC-SSSEEEEECTTSCEEEEECSEEEECCCEECC--CBT-TBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEe-cCCEEEEEeCCCceEEEEeCEEEEccCCCCC--CCC-Ccc
Confidence 000 11112334667899999998 5556 666777777666 57999999999999864 344 543
Q ss_pred ----cEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhc
Q psy2951 714 ----KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESK 789 (1466)
Q Consensus 714 ----~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~ 789 (1466)
... ..+..+... ....+++++|||+|++|+|+|..|++.|.+|+++++.+.++ +.+++++.+.+.+.+++.
T Consensus 178 ~~~~~~~-~~~~~~~~~---~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-~~~d~~~~~~l~~~l~~~ 252 (491)
T 3urh_A 178 VAFDEKT-IVSSTGALA---LEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTIL-GGMDGEVAKQLQRMLTKQ 252 (491)
T ss_dssp CCCCSSS-EECHHHHTS---CSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS-SSSCHHHHHHHHHHHHHT
T ss_pred cccCCee-EEehhHhhh---hhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccc-ccCCHHHHHHHHHHHHhC
Confidence 111 224444433 33458999999999999999999999999999999999877 468999999999999999
Q ss_pred CcEEEccceEEEEEecCCCceEEEECC---CC--cEEecCEEEEccccccCccc--cccCCceeeCCCcEEeCCCCCCCC
Q psy2951 790 GVKFVMKANVSSFEKNEKNDVTAANLD---NG--TTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNV 862 (1466)
Q Consensus 790 gv~~~~~~~v~~i~~~~~~~~~~v~~~---~g--~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~~~G~i~vd~~~~t~~ 862 (1466)
||++++++++++++..+++ ..+.+. +| +++++|.||+|+|++|++++ ++..|++++++|+|.||+++||+.
T Consensus 253 gV~v~~~~~v~~i~~~~~~--~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~ 330 (491)
T 3urh_A 253 GIDFKLGAKVTGAVKSGDG--AKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQTSI 330 (491)
T ss_dssp TCEEECSEEEEEEEEETTE--EEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCBCSS
T ss_pred CCEEEECCeEEEEEEeCCE--EEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCCCCC
Confidence 9999999999999854332 234443 24 58999999999999999986 677899999999999999999999
Q ss_pred CCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCCCc--CcccCeeeeeecCceeEEeeccCC------C
Q psy2951 863 PGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS--LSTIPFFWTMLFGVGFRFAGYAAG------H 934 (1466)
Q Consensus 863 ~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~------~ 934 (1466)
|+|||+|||+..+. .+..|..||+.+|.+|++.... +..+|+ ..+++..+..+|+++. .
T Consensus 331 ~~IyA~GD~~~~~~-----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~--~~~~~p~~a~vGlte~~a~~~g~ 397 (491)
T 3urh_A 331 AGVYAIGDVVRGPM-----------LAHKAEDEGVAVAEIIAGQAGHVNYDVIPG--VVYTQPEVASVGKTEEELKAAGV 397 (491)
T ss_dssp TTEEECGGGSSSCC-----------CHHHHHHHHHHHHHHHTTSCCCCCTTCCCE--EECSSSCEEEEECCHHHHHHTTC
T ss_pred CCEEEEEecCCCcc-----------chhHHHHHHHHHHHHHcCCCcccCCCCCCE--EEEccCCeEEEeCCHHHHHhCCC
Confidence 99999999996553 4579999999999999987654 344553 3356777888888752 1
Q ss_pred CceeEec----------ccccceEEEEEe--cCCeEEEEEeecCc
Q psy2951 935 TQVDIVG----------DLEALKFTAYYS--NADKVLAILTVGMD 967 (1466)
Q Consensus 935 ~~~~~~~----------~~~~~~~~~~~~--~~~~i~g~~~~g~~ 967 (1466)
+-..... ..++..|+|+++ ++++++|++++|..
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~ 442 (491)
T 3urh_A 398 AYKIGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFG 442 (491)
T ss_dssp CEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEESTT
T ss_pred CEEEEEEecCcchhhhcCCCCcEEEEEEEECCCCEEEEEEEECCC
Confidence 1111110 113457899988 47999999999986
No 93
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=1.1e-33 Score=346.12 Aligned_cols=361 Identities=22% Similarity=0.317 Sum_probs=269.2
Q ss_pred CcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCC----CCchhhc----------------------cCccc
Q psy2951 1067 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRV----KLSKQLD----------------------IKADS 1120 (1466)
Q Consensus 1067 ~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~----~l~~~~~----------------------~~~~~ 1120 (1466)
++|+|||||+||++||..|++.|. +|+|||+++.++.... ..++.+. .+...
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~--~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 79 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGM--KVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPA 79 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC--CEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCC--eEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHH
Confidence 579999999999999999999998 9999999865432100 0001000 00000
Q ss_pred ccc-----------cChhhhccCCcEEEcCCeEEEeecCCCCeEEecCCcEEecCeEEEecCCCCCcCCCCCCCC--cEE
Q psy2951 1121 ILL-----------RTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN--KVF 1187 (1466)
Q Consensus 1121 ~~~-----------~~~~~~~~~~v~~~~~~~v~~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~--~v~ 1187 (1466)
+.. ...+++++.+++++.++ +..+ ++....|.+ +|.++.||+||+|||++|+.|+++ |.+ +++
T Consensus 80 ~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~-~~~i-~~~~~~v~~-~g~~~~~d~lviAtG~~p~~~~~~-g~~~~~v~ 155 (455)
T 2yqu_A 80 LMAHKDKVVQANTQGVEFLFKKNGIARHQGT-ARFL-SERKVLVEE-TGEELEARYILIATGSAPLIPPWA-QVDYERVV 155 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEEEESC-EEES-SSSEEEETT-TCCEEEEEEEEECCCEEECCCTTB-CCCSSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe-cCCeEEEee-CCEEEEecEEEECCCCCCCCCCCC-CCCcCcEe
Confidence 000 01234556689999988 5567 654333433 678899999999999999999888 765 333
Q ss_pred EecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcC
Q psy2951 1188 YLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMK 1267 (1466)
Q Consensus 1188 ~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~ 1267 (1466)
+.+++..+. ..+++++|||+|++|+|+|..|++.|.+|+++++.+.+++ .+++++.+.+.+.++++||+++++
T Consensus 156 ---~~~~~~~~~---~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~-~~~~~~~~~l~~~l~~~Gv~i~~~ 228 (455)
T 2yqu_A 156 ---TSTEALSFP---EVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP-TMDLEVSRAAERVFKKQGLTIRTG 228 (455)
T ss_dssp ---CHHHHTCCS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-TSCHHHHHHHHHHHHHHTCEEECS
T ss_pred ---chHHhhccc---cCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc-ccCHHHHHHHHHHHHHCCCEEEEC
Confidence 455554332 2468999999999999999999999999999999988775 578899999999999999999999
Q ss_pred ceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCccc--cccCCceeeCCCeEEeCCCccccCCCEEEecccccC
Q psy2951 1268 ANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYA 1345 (1466)
Q Consensus 1268 ~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~ 1345 (1466)
++|++++ .++ ....+.+.+|+++++|.||+|+|..|++++ ++..|+.++.+|++.||++++|+.|+|||+|||+..
T Consensus 229 ~~V~~i~-~~~-~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~ 306 (455)
T 2yqu_A 229 VRVTAVV-PEA-KGARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRTRVPHIYAIGDVVRG 306 (455)
T ss_dssp CCEEEEE-EET-TEEEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBCSSTTEEECGGGSSS
T ss_pred CEEEEEE-EeC-CEEEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCcccCCCCEEEEecCCCC
Confidence 9999998 333 334577788999999999999999999986 677899888778999999999999999999999876
Q ss_pred CCccCCCceeeeecHHHHHHHHHHHHHHhcCCCCCC--CCCccceeccccccEEEEeeCCC-----CceEEE--------
Q psy2951 1346 PLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTSL--STIPFFWTMLFGVGFRFAGYAAG-----HTQVDI-------- 1410 (1466)
Q Consensus 1346 p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~~~--~~~p~~w~~~~~~~~~~~g~~~~-----~~~~~~-------- 1410 (1466)
+.. ++.|..||+.||.||+|...++ ..+| |...++..+-.+|..+. ..++.+
T Consensus 307 ~~~-----------~~~A~~~g~~aa~~i~~~~~~~~~~~~p--~~~~~~~~~a~~G~~~~~a~~~g~~~~~~~~~~~~~ 373 (455)
T 2yqu_A 307 PML-----------AHKASEEGIAAVEHMVRGFGHVDYQAIP--SVVYTHPEIAAVGYTEEELKAQGIPYKVGKFPYSAS 373 (455)
T ss_dssp CCC-----------HHHHHHHHHHHHHHHHHSCCCCCGGGCC--EEECSSSEEEEEECCHHHHHHHTCCEEEEEEEGGGC
T ss_pred ccC-----------HHHHHHhHHHHHHHHcCCCccCCCCCCC--EEEEcCCceEEEECCHHHHHHcCCCEEEEEEEcccc
Confidence 543 3789999999999999866554 3455 44445677777776421 112221
Q ss_pred -----cCCcCCceEEEEEEe--CCEEEEEEEecCc--HHHHHHHHHHHcCCCCChhcc
Q psy2951 1411 -----VGDLEALKFTAYYSN--ADKVLAILTVGMD--PLAAQFAERIKMQKYIQKDQI 1459 (1466)
Q Consensus 1411 -----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 1459 (1466)
.+ ++..|++++++ +++|+|+..+|.+ ..+..+.-+|+.+. +.+++
T Consensus 374 ~~~~~~~--~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~--~~~~~ 427 (455)
T 2yqu_A 374 GRARAMG--ETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAALALFFKA--SAEDL 427 (455)
T ss_dssp HHHHHHT--CCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTC--BHHHH
T ss_pred hHHHhcC--CCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCC--CHHHH
Confidence 12 24568888775 7999999999986 33455556777764 34444
No 94
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.4e-33 Score=342.41 Aligned_cols=343 Identities=17% Similarity=0.234 Sum_probs=260.9
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCc----c----------------chhcc-------cCc
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK----L----------------SKQLD-------IKA 647 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~----~----------------~~~~~-------~~~ 647 (1466)
.+||+||||||||+++|+.|+++|++ |+++|+. .+++.... . ...+. .+.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~--V~liEk~-~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKK--VAIAEEF-RYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDW 81 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCC--EEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCE--EEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCH
Confidence 58999999999999999999999998 7888883 22221000 0 00000 011
Q ss_pred c-----------cccccCHhHhhhCCcEEEEceEEEEeccccccEEEc-cCCCEEecCEEEEcCCCCCC-cCCCCCCCCc
Q psy2951 648 D-----------SILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKL-QDGTSIDFTKIYLATGSSPR-TISQADGVNK 714 (1466)
Q Consensus 648 ~-----------~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~v~~-~~~~~~~~d~lviAtG~~~~-~~~~~~g~~~ 714 (1466)
. .+...+..++++.+++++.++ +..+ + .+.+.+ .++..+.||++|||||++|. .|+++ |.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i-~--~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~-G~~~ 156 (463)
T 4dna_A 82 AKLVAAKEQEIARLEGLYRKGLANAGAEILDTR-AELA-G--PNTVKLLASGKTVTAERIVIAVGGHPSPHDALP-GHEL 156 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESC-EEES-S--SSEEEETTTTEEEEEEEEEECCCEEECCCTTST-TGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEe-e--CCEEEEecCCeEEEeCEEEEecCCCcccCCCCC-Cccc
Confidence 1 112223344566799999997 6666 4 346666 46788999999999999999 99998 8764
Q ss_pred EEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEE
Q psy2951 715 VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFV 794 (1466)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~ 794 (1466)
+ .+.++...+. ..+++++|||+|++|+|+|..+++.|.+|+++++.+.++ +.+++++.+.+.+.+++.||+++
T Consensus 157 ~---~~~~~~~~~~---~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l-~~~~~~~~~~l~~~l~~~Gv~i~ 229 (463)
T 4dna_A 157 C---ITSNEAFDLP---ALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL-SRFDQDMRRGLHAAMEEKGIRIL 229 (463)
T ss_dssp C---BCHHHHTTCS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-TTSCHHHHHHHHHHHHHTTCEEE
T ss_pred c---ccHHHHhhhh---cCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-cccCHHHHHHHHHHHHHCCCEEE
Confidence 3 3445544332 348999999999999999999999999999999998877 67899999999999999999999
Q ss_pred ccceEEEEEecCCCceEEEE-CCCCcEEecCEEEEccccccCccc--cccCCceeeCCCcEEeCCCCCCCCCCeEEeccc
Q psy2951 795 MKANVSSFEKNEKNDVTAAN-LDNGTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAGGDI 871 (1466)
Q Consensus 795 ~~~~v~~i~~~~~~~~~~v~-~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~ 871 (1466)
+++.+++++..+++ ...+. +++|+ +++|.||+|+|++|++.+ ++..|++++++|+|.||+++||+.|+|||+|||
T Consensus 230 ~~~~v~~i~~~~~~-~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~iya~GD~ 307 (463)
T 4dna_A 230 CEDIIQSVSADADG-RRVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGDV 307 (463)
T ss_dssp CSCCEEEEEECTTS-CEEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBCSSTTEEECSGG
T ss_pred CCCEEEEEEEcCCC-EEEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCCCCCCEEEEEec
Confidence 99999999854343 34678 88887 999999999999999887 788899999999999999999999999999999
Q ss_pred cccCCcccCCceeeeccHHHHHHHHHHHHHHhccCCC---cCcccCeeeeeecCceeEEeeccCCCC-----cee-Ee--
Q psy2951 872 AYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT---SLSTIPFFWTMLFGVGFRFAGYAAGHT-----QVD-IV-- 940 (1466)
Q Consensus 872 ~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~~-~~-- 940 (1466)
+..+. .++.|..||+.+|.||++... .+..+|+. .+....+..+|+++... +.. ..
T Consensus 308 ~~~~~-----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~--~~~~p~~a~vG~te~~a~~~~~~~~~~~~~ 374 (463)
T 4dna_A 308 TDRVQ-----------LTPVAIHEAMCFIETEYKNNPTSPDHDLIATA--VFSQPEIGTVGITEEEAARKFQEIEVYRAE 374 (463)
T ss_dssp GSSCC-----------CHHHHHHHHHHHHHHHHSSCCCCCCCSCCCEE--ECSSSCEEEEECCHHHHHHHSSEEEEEEEE
T ss_pred CCCCC-----------ChHHHHHHHHHHHHHHcCCCCcccCCCCCCEE--EECCCCeEEecCCHHHHHHcCCCeEEEEEe
Confidence 87543 457899999999999998643 34455532 23446677888765211 110 00
Q ss_pred --c------ccccceEEEEEe--cCCeEEEEEeecCc
Q psy2951 941 --G------DLEALKFTAYYS--NADKVLAILTVGMD 967 (1466)
Q Consensus 941 --~------~~~~~~~~~~~~--~~~~i~g~~~~g~~ 967 (1466)
. .-++..|+|+++ ++++++|++++|.+
T Consensus 375 ~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~ 411 (463)
T 4dna_A 375 FRPMKATLSGRKEKTIMKLVVNAADRKVVGAHILGHD 411 (463)
T ss_dssp ECCTTHHHHCCCCCEEEEEEEETTTCBEEEEEEESTT
T ss_pred ccccchhhcCCCceEEEEEEEECCCCEEEEEEEECCC
Confidence 0 012567899988 46899999999976
No 95
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=4.2e-33 Score=344.96 Aligned_cols=351 Identities=20% Similarity=0.269 Sum_probs=255.2
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCC--------CCCCCCCcc---c-h----------------hc-
Q psy2951 593 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN--------FLPYDRVKL---S-K----------------QL- 643 (1466)
Q Consensus 593 ~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~--------~~~~~~~~~---~-~----------------~~- 643 (1466)
...+||+||||||||++||..|+++|.+ |+++|+++ .+++..... + + .+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~--V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g 107 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKK--VMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYG 107 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCC--EEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCe--EEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcC
Confidence 3468999999999999999999999988 88888753 111100000 0 0 00
Q ss_pred -------ccCccccccc-----------CHhHhhhCCcEEEEceEEEEeccccccEEEccCCC--EEecCEEEEcCCCCC
Q psy2951 644 -------DIKADSILLR-----------TEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGT--SIDFTKIYLATGSSP 703 (1466)
Q Consensus 644 -------~~~~~~~~~~-----------~~~~~~~~gv~~~~~~~v~~i~~~~~~~v~~~~~~--~~~~d~lviAtG~~~ 703 (1466)
..+...+..+ ....++..+|+++.++ +..+ +.....+.+.+++ ++.||+||||||++|
T Consensus 108 ~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~-a~~~-d~~~v~v~~~~g~~~~i~~d~lViATGs~p 185 (519)
T 3qfa_A 108 WKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAY-GQFI-GPHRIKATNNKGKEKIYSAERFLIATGERP 185 (519)
T ss_dssp BCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEEE-ETTEEEEECTTCCCCEEEEEEEEECCCEEE
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEe-eCCEEEEEcCCCCEEEEECCEEEEECCCCc
Confidence 0011111111 1224556799999988 7777 7777777766664 799999999999999
Q ss_pred CcCCCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHH
Q psy2951 704 RTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERIT 783 (1466)
Q Consensus 704 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~ 783 (1466)
+.|+++ |.+.. ..+..+...+. ..+++++|||+|++|+|+|..|+++|.+||++++. .. .+.+++++.+.+.
T Consensus 186 ~~p~i~-G~~~~--~~t~~~~~~l~---~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~-l~~~d~~~~~~~~ 257 (519)
T 3qfa_A 186 RYLGIP-GDKEY--CISSDDLFSLP---YCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-IL-LRGFDQDMANKIG 257 (519)
T ss_dssp CCCCCT-THHHH--CBCHHHHTTCS---SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CS-STTSCHHHHHHHH
T ss_pred CCCCCC-CccCc--eEcHHHHhhhh---hcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-cc-cccCCHHHHHHHH
Confidence 999998 86521 23445544332 34788999999999999999999999999999985 33 4678999999999
Q ss_pred HHHHhcCcEEEccceEEEEEecCC---Cce-EEEECCCC-c--EEecCEEEEccccccCccc--cccCCceee-CCCcEE
Q psy2951 784 KLFESKGVKFVMKANVSSFEKNEK---NDV-TAANLDNG-T--TIPADLVIVGIGTVLNTNY--LDGKGVELN-GQKAVV 853 (1466)
Q Consensus 784 ~~l~~~gv~~~~~~~v~~i~~~~~---~~~-~~v~~~~g-~--~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~~G~i~ 853 (1466)
+.|+++||+++++..+++++..++ +.+ ..+...++ + ++++|.||+|+|++|++++ ++..|++++ ++|+|.
T Consensus 258 ~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~ 337 (519)
T 3qfa_A 258 EHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIP 337 (519)
T ss_dssp HHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBC
T ss_pred HHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEe
Confidence 999999999999988888764322 222 22333454 2 5789999999999999986 688899998 679999
Q ss_pred eCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCCC---cCcccCeeeeeecCceeEEeec
Q psy2951 854 VNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT---SLSTIPFFWTMLFGVGFRFAGY 930 (1466)
Q Consensus 854 vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~~---~~~~~~~~~~~~~~~~~~~~g~ 930 (1466)
||+++||+.|+|||+|||+.... ..++.|..||++||+||++... .+..+|+ ..+++..+..+|+
T Consensus 338 Vd~~~~Ts~~~IyA~GD~~~g~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~--~~~~~p~~a~vGl 405 (519)
T 3qfa_A 338 VTDEEQTNVPYIYAIGDILEDKV----------ELTPVAIQAGRLLAQRLYAGSTVKCDYENVPT--TVFTPLEYGACGL 405 (519)
T ss_dssp CCTTSBCSSTTEEECGGGBSSSC----------CCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCE--EECSSSCEEEEEC
T ss_pred eCCCCccCCCCEEEEEeccCCCC----------ccHHHHHHHHHHHHHHHcCCCCccCCCCcCcE--EEECCCceEEecC
Confidence 99999999999999999984211 2457899999999999997643 3445553 3355677888888
Q ss_pred cCCCC-------ceeE-e----c-------ccccceEEEEEec---CCeEEEEEeecCc
Q psy2951 931 AAGHT-------QVDI-V----G-------DLEALKFTAYYSN---ADKVLAILTVGMD 967 (1466)
Q Consensus 931 ~~~~~-------~~~~-~----~-------~~~~~~~~~~~~~---~~~i~g~~~~g~~ 967 (1466)
++... .... . . ..++..|+|++++ +++++|++++|.+
T Consensus 406 te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~~ilGa~i~g~~ 464 (519)
T 3qfa_A 406 SEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPN 464 (519)
T ss_dssp CHHHHHHHHCGGGEEEEEEEECCHHHHTTTCCTTTEEEEEEEETTTTCEEEEEEEESTT
T ss_pred CHHHHHhhCCCCCEEEEEEeccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCC
Confidence 75311 1111 0 0 0124679999883 4899999999987
No 96
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=5e-33 Score=340.01 Aligned_cols=347 Identities=19% Similarity=0.273 Sum_probs=251.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCC--------CCCCCCc----------------------cchhcc
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENF--------LPYDRVK----------------------LSKQLD 644 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~--------~~~~~~~----------------------~~~~~~ 644 (1466)
.+|++||||||||++||..++++|.+ |.++|+... +++ .|. ....++
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~k--ValIE~~~~~~~~~k~~lGG-tCln~GCIPsK~L~~aa~~~~~~~~~~~~~G 118 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGAR--VLLFDYVKPSSQGTKWGIGG-TCVNVGCVPKKLMHYAGHMGSIFKLDSKAYG 118 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCC--EEEECCCCCCTTCCCCCSSH-HHHHHSHHHHHHHHHHHHHHHHHHHTGGGGT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCe--EEEEeccccccccccCCCCC-cccccchHHHHHHHHHHHHHHHHHhhhHhcC
Confidence 58999999999999999999999998 788885431 111 000 000011
Q ss_pred -------cCccccccc-----------CHhHhhhCCcEEEEceEEEEeccccccEEEcc----CCCEEecCEEEEcCCCC
Q psy2951 645 -------IKADSILLR-----------TEEFYKDNDIHVIKGKKIISDSELNEKKIKLQ----DGTSIDFTKIYLATGSS 702 (1466)
Q Consensus 645 -------~~~~~~~~~-----------~~~~~~~~gv~~~~~~~v~~i~~~~~~~v~~~----~~~~~~~d~lviAtG~~ 702 (1466)
.+...+..+ ....+++.+|+++.+. ...+ +.....|... +++++++|++|||||++
T Consensus 119 i~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~-a~f~-~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~ 196 (542)
T 4b1b_A 119 WKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGL-AKLK-DKNTVSYYLKGDLSKEETVTGKYILIATGCR 196 (542)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEE-EEEE-ETTEEEEEEC--CCCEEEEEEEEEEECCCEE
T ss_pred cccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeee-EEEc-CCCcceEeecccCCceEEEeeeeEEeccCCC
Confidence 111111111 1234567899999888 5555 5554444332 33579999999999999
Q ss_pred CCcCCCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHH
Q psy2951 703 PRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERI 782 (1466)
Q Consensus 703 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~ 782 (1466)
|..|+.+ +.+... ..+.+++..+. ..+++++|||||++|+|+|..++++|.+||++.++ +.+ +.+++++.+.+
T Consensus 197 P~~P~~~-~~~~~~-~~ts~~~l~l~---~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~-~~L-~~~D~ei~~~l 269 (542)
T 4b1b_A 197 PHIPDDV-EGAKEL-SITSDDIFSLK---KDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRS-IVL-RGFDQQCAVKV 269 (542)
T ss_dssp ECCCSSS-BTHHHH-CBCHHHHTTCS---SCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESS-CSS-TTSCHHHHHHH
T ss_pred CCCCCcc-cCCCcc-ccCchhhhccc---cCCceEEEECCCHHHHHHHHHHHhcCCeEEEeccc-ccc-cccchhHHHHH
Confidence 9999766 333111 12556655443 34899999999999999999999999999999875 444 67899999999
Q ss_pred HHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccCccc--cccCCceeeCCCc-EEeCCCCC
Q psy2951 783 TKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKA-VVVNEYLE 859 (1466)
Q Consensus 783 ~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~~~G~-i~vd~~~~ 859 (1466)
.+.|+++||+++++..+.+++..+ + ...+.+.++.++.+|.|++|+|++||++. ++..|+.++..++ +.+|+++|
T Consensus 270 ~~~l~~~gi~~~~~~~v~~~~~~~-~-~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~ 347 (542)
T 4b1b_A 270 KLYMEEQGVMFKNGILPKKLTKMD-D-KILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSC 347 (542)
T ss_dssp HHHHHHTTCEEEETCCEEEEEEET-T-EEEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSB
T ss_pred HHHHHhhcceeecceEEEEEEecC-C-eEEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEecccccc
Confidence 999999999999999999998443 2 34677888889999999999999999986 4677889887765 47889999
Q ss_pred CCCCCeEEecccccc-CCcccCCceeeeccHHHHHHHHHHHHHHhccCCC---cCcccCeeeeeecCceeEEeeccCCCC
Q psy2951 860 TNVPGVYAGGDIAYA-PLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT---SLSTIPFFWTMLFGVGFRFAGYAAGHT 935 (1466)
Q Consensus 860 t~~~~iya~GD~~~~-~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~ 935 (1466)
|+.|+|||+|||+.. |. +++.|..||++++.+|++... .+..+|+. .+..+.+..+|+++...
T Consensus 348 Ts~p~IyAiGDv~~~~p~-----------La~~A~~eg~~aa~~i~g~~~~~~d~~~iP~~--vft~PeiA~VGlTE~eA 414 (542)
T 4b1b_A 348 TNIPSIFAVGDVAENVPE-----------LAPVAIKAGEILARRLFKDSDEIMDYSYIPTS--IYTPIEYGACGYSEEKA 414 (542)
T ss_dssp CSSTTEEECTTSBTTCCC-----------CHHHHHHHHHHHHHHHHSCCCCCCCCSSCCEE--ECSSSCEEEEECCHHHH
T ss_pred ccCCCeEEeccccCCchh-----------HHHHHHHHHHHHHHHHhcCCCcccCCCCCceE--EeCCCCeEEEeCCHHHH
Confidence 999999999999854 33 347899999999999998543 35566643 24556678888764210
Q ss_pred -------ce-eE------------------e-------cccccceEEEEEe---cCCeEEEEEeecCch
Q psy2951 936 -------QV-DI------------------V-------GDLEALKFTAYYS---NADKVLAILTVGMDP 968 (1466)
Q Consensus 936 -------~~-~~------------------~-------~~~~~~~~~~~~~---~~~~i~g~~~~g~~~ 968 (1466)
.. .. . ...++..|+|+++ ++++++|++++|...
T Consensus 415 ~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A 483 (542)
T 4b1b_A 415 YELYGKSNVEVFLQEFNNLEISAVHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNA 483 (542)
T ss_dssp HHHHCTTTEEEEEC-----------------------------CCCEEEEEETTTTTBEEEEEEESTTH
T ss_pred HHhCCCCcEEEEEeeccchhhhhhhhhhhhhcccccccccCCCceEEEEEEEeCCCCEEEEEEEECCCH
Confidence 00 00 0 0112456888876 468999999999873
No 97
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=9.5e-33 Score=340.37 Aligned_cols=347 Identities=20% Similarity=0.266 Sum_probs=255.4
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCC---------CCCCCCccc---------------------hh
Q psy2951 593 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENF---------LPYDRVKLS---------------------KQ 642 (1466)
Q Consensus 593 ~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~---------~~~~~~~~~---------------------~~ 642 (1466)
...+||+||||||||++||..|+++|++ |+++|+... +++ .+... ..
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~--V~liEk~~~~~~~~~~~~~GG-~c~~~gciPsk~l~~~~~~~~~~~~~~~ 83 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGAR--VACLDFVKPTPTLGTKWGVGG-TCVNVGCIPKKLMHQASLLGEAVHEAAA 83 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCC--EEEECCCCCCTTTTCCCCSSC-HHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCE--EEEEEeccccccccccCCcCC-eecccCchhhHHHHHHHHHHHHHHHHHh
Confidence 4568999999999999999999999988 788874210 111 00000 00
Q ss_pred cc--------cCccccccc-----------CHhHhhhCCcEEEEceEEEEeccccccEEEccCCC-EEecCEEEEcCCCC
Q psy2951 643 LD--------IKADSILLR-----------TEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGT-SIDFTKIYLATGSS 702 (1466)
Q Consensus 643 ~~--------~~~~~~~~~-----------~~~~~~~~gv~~~~~~~v~~i~~~~~~~v~~~~~~-~~~~d~lviAtG~~ 702 (1466)
++ .+...+..+ ....++..+++++.++ +..+ +.....+.+.++. ++.||+||||||++
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-a~~~-~~~~v~v~~~~g~~~~~~d~lviATGs~ 161 (483)
T 3dgh_A 84 YGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGL-GSFV-DSHTLLAKLKSGERTITAQTFVIAVGGR 161 (483)
T ss_dssp TTBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEEE-ETTEEEEECTTCCEEEEEEEEEECCCEE
T ss_pred cCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEc-cCCEEEEEeCCCeEEEEcCEEEEeCCCC
Confidence 00 111111111 1133566799999888 6566 6666677776664 79999999999999
Q ss_pred CCcCCCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHH
Q psy2951 703 PRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERI 782 (1466)
Q Consensus 703 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~ 782 (1466)
|+.|+++ |.+.. ..+..+...+ ...+++++|||+|++|+|+|..|++.|.+|+++++. ..+ +.+++++.+.+
T Consensus 162 p~~p~i~-G~~~~--~~~~~~~~~~---~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l-~~~d~~~~~~l 233 (483)
T 3dgh_A 162 PRYPDIP-GAVEY--GITSDDLFSL---DREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-IVL-RGFDQQMAELV 233 (483)
T ss_dssp ECCCSST-THHHH--CBCHHHHTTC---SSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-CSS-TTSCHHHHHHH
T ss_pred cCCCCCC-Ccccc--cCcHHHHhhh---hhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC-CCC-cccCHHHHHHH
Confidence 9999999 87521 1244554433 234899999999999999999999999999999985 333 67899999999
Q ss_pred HHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCc-----EEecCEEEEccccccCcccc--ccCCceeeCCCcEEeC
Q psy2951 783 TKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGT-----TIPADLVIVGIGTVLNTNYL--DGKGVELNGQKAVVVN 855 (1466)
Q Consensus 783 ~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~-----~i~~D~vi~a~G~~p~~~~~--~~~gl~~~~~G~i~vd 855 (1466)
.+.|+++||++++++.+++++..+++.+ .+.+.++. ++++|.||+|+|++|+++++ +..|+++++ |+|.||
T Consensus 234 ~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd 311 (483)
T 3dgh_A 234 AASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVD 311 (483)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCC
T ss_pred HHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEEC
Confidence 9999999999999999999985444433 45555443 79999999999999999876 888999998 999999
Q ss_pred CCCCCCCCCeEEecccccc-CCcccCCceeeeccHHHHHHHHHHHHHHhccCCC---cCcccCeeeeeecCceeEEeecc
Q psy2951 856 EYLETNVPGVYAGGDIAYA-PLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT---SLSTIPFFWTMLFGVGFRFAGYA 931 (1466)
Q Consensus 856 ~~~~t~~~~iya~GD~~~~-~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~~---~~~~~~~~~~~~~~~~~~~~g~~ 931 (1466)
++++|+.|+|||+|||+.. +. .++.|..||+++|.||++... .+..+|+.. +....+..+|++
T Consensus 312 ~~~~t~~~~IyA~GD~~~~~~~-----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~--~~~p~~a~vGlt 378 (483)
T 3dgh_A 312 SQEATNVANIYAVGDIIYGKPE-----------LTPVAVLAGRLLARRLYGGSTQRMDYKDVATTV--FTPLEYACVGLS 378 (483)
T ss_dssp TTCBCSSTTEEECSTTBTTSCC-----------CHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEE--CSSSEEEEEECC
T ss_pred cCCccCCCCEEEEEcccCCCCc-----------cHHHHHHHHHHHHHHHcCCCCCcCCCCCCCEEE--ECCCccEEEeCC
Confidence 9999999999999999842 32 457899999999999998643 355666432 445667788877
Q ss_pred CCC-------CceeE-e----c-c------cccceEEEEEec---CCeEEEEEeecCc
Q psy2951 932 AGH-------TQVDI-V----G-D------LEALKFTAYYSN---ADKVLAILTVGMD 967 (1466)
Q Consensus 932 ~~~-------~~~~~-~----~-~------~~~~~~~~~~~~---~~~i~g~~~~g~~ 967 (1466)
+.. ..... . . . -++..|+|++++ +++++|++++|.+
T Consensus 379 e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~~ilG~~~~g~~ 436 (483)
T 3dgh_A 379 EEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPV 436 (483)
T ss_dssp HHHHHHHHCGGGEEEEEEECCCGGGTTTTCCCTTCEEEEEEESSTTCBEEEEEEEETT
T ss_pred HHHHHhhCCCCCEEEEEEeecchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCC
Confidence 521 11110 0 0 0 124569999883 5899999999986
No 98
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=2e-32 Score=337.61 Aligned_cols=348 Identities=21% Similarity=0.272 Sum_probs=256.1
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCC--------CCCCCCCcc----c----------------hhcc-
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN--------FLPYDRVKL----S----------------KQLD- 644 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~--------~~~~~~~~~----~----------------~~~~- 644 (1466)
..+||+||||||||++||..|+++|.+ |+++|+.+ .+++..... . ..++
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~--V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 82 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKK--VAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGW 82 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC--EEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCe--EEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCc
Confidence 458999999999999999999999988 88888621 122100000 0 0000
Q ss_pred -------cCccccccc-----------CHhHhhhCCcEEEEceEEEEeccccccEEEccCC--CEEecCEEEEcCCCCCC
Q psy2951 645 -------IKADSILLR-----------TEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDG--TSIDFTKIYLATGSSPR 704 (1466)
Q Consensus 645 -------~~~~~~~~~-----------~~~~~~~~gv~~~~~~~v~~i~~~~~~~v~~~~~--~~~~~d~lviAtG~~~~ 704 (1466)
.+...+..+ ....+++.+++++.++ +..+ +.....+.+.++ .++.||+||||||++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~-~~~~-~~~~v~v~~~~g~~~~~~~d~lViATGs~p~ 160 (488)
T 3dgz_A 83 EVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK-ASFV-DEHTVRGVDKGGKATLLSAEHIVIATGGRPR 160 (488)
T ss_dssp CCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCE-EEES-SSSEEEEECTTSCEEEEEEEEEEECCCEEEC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEc-cCCeEEEEeCCCceEEEECCEEEEcCCCCCC
Confidence 011111111 2234556799999888 7666 777777777666 47999999999999999
Q ss_pred cCC-CCCCCC-cEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHH
Q psy2951 705 TIS-QADGVN-KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERI 782 (1466)
Q Consensus 705 ~~~-~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~ 782 (1466)
.|+ +| |.+ .. .+..+...+ ...+++++|||+|++|+|+|..|++.|.+|+++++.+ . .+.+++++.+.+
T Consensus 161 ~p~~i~-G~~~~~---~~~~~~~~~---~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~-l~~~d~~~~~~l 231 (488)
T 3dgz_A 161 YPTQVK-GALEYG---ITSDDIFWL---KESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI-P-LRGFDQQMSSLV 231 (488)
T ss_dssp CCSSCB-THHHHC---BCHHHHTTC---SSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-S-STTSCHHHHHHH
T ss_pred CCCCCC-Cccccc---CcHHHHHhh---hhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc-c-cccCCHHHHHHH
Confidence 998 88 865 22 244454433 2358899999999999999999999999999999864 3 367899999999
Q ss_pred HHHHHhcCcEEEccceEEEEEecCCCceEEEECC---CCc--EEecCEEEEccccccCccc--cccCCceee-CCCcEEe
Q psy2951 783 TKLFESKGVKFVMKANVSSFEKNEKNDVTAANLD---NGT--TIPADLVIVGIGTVLNTNY--LDGKGVELN-GQKAVVV 854 (1466)
Q Consensus 783 ~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~---~g~--~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~~G~i~v 854 (1466)
.+.|+++||++++++.+.+++..+++.+ .+.+. +|+ ++++|.||+|+|++|++++ ++..|++++ ++|+|.|
T Consensus 232 ~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~v 310 (488)
T 3dgz_A 232 TEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIV 310 (488)
T ss_dssp HHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCC
T ss_pred HHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeE
Confidence 9999999999999999999985434333 34433 254 5799999999999999987 678899998 7899999
Q ss_pred CCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCCC---cCcccCeeeeeecCceeEEeecc
Q psy2951 855 NEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT---SLSTIPFFWTMLFGVGFRFAGYA 931 (1466)
Q Consensus 855 d~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~~---~~~~~~~~~~~~~~~~~~~~g~~ 931 (1466)
|+++||+.|+|||+|||+.... ..++.|..||+++|.||++... .+..+|+.. +....+..+|++
T Consensus 311 d~~~~t~~~~IyA~GD~~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~--~~~p~~a~vGlt 378 (488)
T 3dgz_A 311 DAQEATSVPHIYAIGDVAEGRP----------ELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTV--FTPLEYGCVGLS 378 (488)
T ss_dssp CTTSBCSSTTEEECGGGBTTCC----------CCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEE--CSSSEEEEEECC
T ss_pred CCCCccCCCCEEEeEEecCCCC----------cchhHHHHHHHHHHHHHcCCCCccCCCCCCCEEE--ECCCCeEEEeCC
Confidence 9999999999999999984211 2457899999999999998643 355566433 445667888877
Q ss_pred CCC-------CceeE-e----c------c-cccceEEEEEec---CCeEEEEEeecCc
Q psy2951 932 AGH-------TQVDI-V----G------D-LEALKFTAYYSN---ADKVLAILTVGMD 967 (1466)
Q Consensus 932 ~~~-------~~~~~-~----~------~-~~~~~~~~~~~~---~~~i~g~~~~g~~ 967 (1466)
+.. ..... . . . .++..|+|++++ +++++|++++|.+
T Consensus 379 e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~~ilG~~~~g~~ 436 (488)
T 3dgz_A 379 EEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPN 436 (488)
T ss_dssp HHHHHHHHCGGGEEEEEEECCCHHHHHTTCCCTTCEEEEEEESSTTCBEEEEEEEETT
T ss_pred HHHHHhhCCCCcEEEEEccccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCC
Confidence 521 11111 1 0 0 014679999884 5899999999986
No 99
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=2e-32 Score=337.33 Aligned_cols=343 Identities=20% Similarity=0.256 Sum_probs=257.2
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCcc----c----------------hhcc-------cCc
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKL----S----------------KQLD-------IKA 647 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~----~----------------~~~~-------~~~ 647 (1466)
.+||+|||||+||++||+.|+++|++ |+++|+. .+++..... . ..++ .+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~--V~liEk~-~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 102 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKR--VAIAEEY-RIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNW 102 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCC--EEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCE--EEEEeCC-CCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCH
Confidence 57999999999999999999999988 8888884 222210000 0 0000 000
Q ss_pred -----------ccccccCHhHhhhCCcEEEEceEEEEeccccccEEEcc-CCCEEecCEEEEcCCCCCC-cCCCCCCCCc
Q psy2951 648 -----------DSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQ-DGTSIDFTKIYLATGSSPR-TISQADGVNK 714 (1466)
Q Consensus 648 -----------~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~v~~~-~~~~~~~d~lviAtG~~~~-~~~~~~g~~~ 714 (1466)
..+.......+++.+++++.++ +..+ +. +.+.+. ++..+.||++|||||+.|. .|+++ |.+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~i-~~--~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~-G~~~ 177 (484)
T 3o0h_A 103 EKLVAAKNKEISRLEGLYREGLQNSNVHIYESR-AVFV-DE--HTLELSVTGERISAEKILIATGAKIVSNSAIK-GSDL 177 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEEE-ET--TEEEETTTCCEEEEEEEEECCCEEECCC--CB-TGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe-eC--CEEEEecCCeEEEeCEEEEccCCCcccCCCCC-Cccc
Confidence 1122223345667899999997 6666 43 456665 6789999999999999999 88888 8764
Q ss_pred EEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEE
Q psy2951 715 VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFV 794 (1466)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~ 794 (1466)
++ +..+... ....+++++|||+|++|+|+|..|++.|.+|+++++.+.++ +.+++++.+.+.+.+++.||+++
T Consensus 178 ~~---~~~~~~~---~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-~~~~~~~~~~l~~~l~~~Gv~i~ 250 (484)
T 3o0h_A 178 CL---TSNEIFD---LEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL-RNFDYDLRQLLNDAMVAKGISII 250 (484)
T ss_dssp SB---CTTTGGG---CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-TTSCHHHHHHHHHHHHHHTCEEE
T ss_pred cc---cHHHHHh---HHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc-cccCHHHHHHHHHHHHHCCCEEE
Confidence 32 2233222 22348999999999999999999999999999999998776 56899999999999999999999
Q ss_pred ccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccCccc--cccCCceeeCCCcEEeCCCCCCCCCCeEEecccc
Q psy2951 795 MKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIA 872 (1466)
Q Consensus 795 ~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~ 872 (1466)
+++++++++.. ++.+ .+.+.+|+++++|.||+|+|++|++.+ ++..|++++++|+|.||++++|+.|+|||+|||+
T Consensus 251 ~~~~V~~i~~~-~~~v-~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~ 328 (484)
T 3o0h_A 251 YEATVSQVQST-ENCY-NVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDVT 328 (484)
T ss_dssp SSCCEEEEEEC-SSSE-EEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGG
T ss_pred eCCEEEEEEee-CCEE-EEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCCCCCCEEEEEecC
Confidence 99999999853 3334 678889999999999999999999887 6778999999999999999999999999999998
Q ss_pred ccCCcccCCceeeeccHHHHHHHHHHHHHHhccCCC---cCcccCeeeeeecCceeEEeeccCCCC-----ceeE-ec--
Q psy2951 873 YAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT---SLSTIPFFWTMLFGVGFRFAGYAAGHT-----QVDI-VG-- 941 (1466)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~-~~-- 941 (1466)
..+. .++.|..||+.+|.||++... .+..+|+. .+....+..+|+++... +... ..
T Consensus 329 ~~~~-----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~--~~~~p~~a~vGlte~~a~~~g~~~~~~~~~~ 395 (484)
T 3o0h_A 329 GHIQ-----------LTPVAIHDAMCFVKNAFENTSTTPDYDLITTA--VFSQPEIGTVGLSEEDALHRYKRVEIYRTVF 395 (484)
T ss_dssp TSCC-----------CHHHHHHHHHHHHHHHHC---CCCCCTTCCEE--ECCSSCEEEEECCHHHHHHHCSEEEEEEEEE
T ss_pred CCCc-----------CHHHHHHHHHHHHHHHcCCCCCcCCCCCCcEE--EECCCCEEEeeCCHHHHHHcCCCEEEEEecC
Confidence 7543 457899999999999998543 34555532 23456688888775211 1110 00
Q ss_pred --------ccccceEEEEEe--cCCeEEEEEeecCc
Q psy2951 942 --------DLEALKFTAYYS--NADKVLAILTVGMD 967 (1466)
Q Consensus 942 --------~~~~~~~~~~~~--~~~~i~g~~~~g~~ 967 (1466)
.-+...|+|+++ ++++++|++++|..
T Consensus 396 ~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~ 431 (484)
T 3o0h_A 396 RPMRNVLSGSPEKMFMKLVVDGESRIVVGAHVLGEN 431 (484)
T ss_dssp CCHHHHHHTCCCCEEEEEEEETTTCBEEEEEEESTT
T ss_pred CcchhhccCCCCcEEEEEEEECCCCEEEEEEEECcC
Confidence 112567899988 46899999999976
No 100
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=5.4e-32 Score=342.77 Aligned_cols=380 Identities=19% Similarity=0.251 Sum_probs=262.5
Q ss_pred CCCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCC-C-----CCCC---CCc-cch----------------hccc-
Q psy2951 41 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN-F-----LPYD---RVK-LSK----------------QLDI- 93 (1466)
Q Consensus 41 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~-~-----~~~~---~~~-~~~----------------~~~~- 93 (1466)
..++||+||||||||++||..|++.|+++.|++..... . .... ... .++ .+..
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~ 184 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWS 184 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcc
Confidence 34689999999999999999999999998886542111 0 0000 000 000 0000
Q ss_pred --------Cccccccc-----------ChhhhhcCCeEEEeCceEEEeccccccEEEecCC--cEEecCEEEEccCCCCC
Q psy2951 94 --------KADSILLR-----------TEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDG--TSIDFTKIYLATGSSPR 152 (1466)
Q Consensus 94 --------~~~~~~~~-----------~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~~--~~~~~d~lviAtG~~~~ 152 (1466)
+..++..+ ....++..+++++.+..... +....++...+| .++.||+||||||++|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~--~~~~v~v~~~~g~~~~~~~d~lviAtGs~p~ 262 (598)
T 2x8g_A 185 LDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLI--SPHEVQITDKNQKVSTITGNKIILATGERPK 262 (598)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEE--ETTEEEEECTTCCEEEEEEEEEEECCCEEEC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEc--CCCEEEEEeCCCCeEEEEeCEEEEeCCCCCC
Confidence 00111111 11224567899988765443 222333444455 46899999999999998
Q ss_pred CCCCCCCCCc-EEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHH
Q psy2951 153 TISQADGVNK-VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERIT 231 (1466)
Q Consensus 153 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~ 231 (1466)
.++ +++... .. +..+...+. ..+++++|||||++|+|+|..|++.|.+||++++. .+.+.+++++.+.+.
T Consensus 263 ~p~-i~G~~~~~~---~~~~~~~~~---~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~--~~l~~~d~~~~~~~~ 333 (598)
T 2x8g_A 263 YPE-IPGAVEYGI---TSDDLFSLP---YFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS--ILLRGFDQQMAEKVG 333 (598)
T ss_dssp CCS-STTHHHHCE---EHHHHTTCS---SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--CSSTTSCHHHHHHHH
T ss_pred CCC-CCCcccceE---cHHHHhhCc---cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC--cCcCcCCHHHHHHHH
Confidence 554 555422 12 233333322 34578999999999999999999999999999987 334568899999999
Q ss_pred HHHHhCCcEEEcCceEEEEEec-----CC---CCeE-EEEcCCCcEEe--ccEEEEeeccccCccc--cccCCceecCCc
Q psy2951 232 KLFESKGVKFVMKANVSSFEKN-----EK---NDVT-AANLDNGTTIP--ADLVIVGIGTVLNTNY--LDGKGVELNGQK 298 (1466)
Q Consensus 232 ~~l~~~GV~i~~~~~v~~i~~~-----~~---~~~~-~v~~~~g~~i~--~D~Vi~a~G~~p~~~~--l~~~gl~~~~~g 298 (1466)
+.+++.||++++++.+++++.. ++ +.+. .+.+.+|++++ +|.||+|+|++||+++ ++..|++++++|
T Consensus 334 ~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G 413 (598)
T 2x8g_A 334 DYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNG 413 (598)
T ss_dssp HHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTS
T ss_pred HHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCC
Confidence 9999999999999988888542 11 2222 22345676655 9999999999999987 467889999889
Q ss_pred cEEECCCCCcCCCCEEEecccccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCC---CCCCCCCcccccccceeeEE
Q psy2951 299 AVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK---TSLSTIPFFWTMLFGVGFRF 375 (1466)
Q Consensus 299 ~i~vd~~~~t~~~~iya~GD~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~---~~~~~~p~~~s~~~~~~~~~ 375 (1466)
+|.||++++|+.|+|||+|||+... +..+..|..||+.+|.||++.. .++..+|+.+- ....+..
T Consensus 414 ~i~vd~~~~ts~~~VyA~GD~~~~~----------~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~~--~~~~~a~ 481 (598)
T 2x8g_A 414 RVVCTDDEQTTVSNVYAIGDINAGK----------PQLTPVAIQAGRYLARRLFAGATELTDYSNVATTVF--TPLEYGA 481 (598)
T ss_dssp CBCCCTTSBCSSTTEEECGGGBTTS----------CCCHHHHHHHHHHHHHHHHHCCCCCCCCTTCCEEEC--SSSCEEE
T ss_pred cEEeCCCCcCCCCCEEEEeeecCCC----------CccHHHHHHhHHHHHHHHhcCCCcccCCCCCcEEEE--CCCceEE
Confidence 9999999999999999999996421 2456789999999999998653 24556664322 2233444
Q ss_pred EEeecC-------CceEEE-----e-------cccCCCeEEEEEEc---CCEEEEEEEECC--CHHHHHHHHHHhcCCCc
Q psy2951 376 AGYAAG-------HTQVDI-----V-------GDLEALKFTAYYSN---ADKVLAILTVGM--DPLAAQFAEQVLEFPYS 431 (1466)
Q Consensus 376 ~G~~~~-------~~~~~~-----~-------g~~~~~~~~~~~~~---~~~i~g~~~~~~--~~~~~~~~~~~i~~~~~ 431 (1466)
+|.... ...+.. . +.....+|.+++.+ +++|+|++++|. +++++.++ .+|+++.+
T Consensus 482 vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~ilG~~~~g~~a~~~i~~~~-~ai~~~~t 560 (598)
T 2x8g_A 482 CGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYA-VAIKMGAT 560 (598)
T ss_dssp EECCHHHHHHHHCGGGEEEEEEEECCTHHHHTTCCSSCEEEEEEEETTTTTEEEEEEEESTTHHHHHHHHH-HHHHTTCB
T ss_pred EeCCHHHHHhhCCCCcEEEEEEeccchhHHhhcCCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHH-HHHHcCCC
Confidence 554321 111211 1 11124688888875 589999999998 45666666 99999987
Q ss_pred c-----ccccCcccchhh
Q psy2951 432 S-----LPHSHRCLGVVL 444 (1466)
Q Consensus 432 ~-----~~~~~p~~~e~~ 444 (1466)
. ++++|||++|.+
T Consensus 561 ~~~l~~~~~~hPt~~e~~ 578 (598)
T 2x8g_A 561 KADFDRTIGIHPTCSETF 578 (598)
T ss_dssp HHHHHHSCCCSSCSGGGG
T ss_pred HHHHhhccccCCCHHHHH
Confidence 6 799999999998
No 101
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=6.7e-32 Score=332.21 Aligned_cols=341 Identities=17% Similarity=0.208 Sum_probs=251.0
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCc---------------------cchhcc-------cC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK---------------------LSKQLD-------IK 646 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~---------------------~~~~~~-------~~ 646 (1466)
.+||+||||||||++||..|+++|++ |+++|++. +++. +. ....++ .+
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~--V~liE~~~-~GGt-c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 83 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDK--VVLIEGGA-YGTT-CARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVN 83 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSC--EEEEESSC-SSCH-HHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCc--EEEEeCCC-CCCc-ccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccC
Confidence 48999999999999999999999988 88888864 2211 10 000000 11
Q ss_pred cccccccCH-----------hHhhh-CCcEEEEceEEEEeccccccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCC-
Q psy2951 647 ADSILLRTE-----------EFYKD-NDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN- 713 (1466)
Q Consensus 647 ~~~~~~~~~-----------~~~~~-~gv~~~~~~~v~~i~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~- 713 (1466)
..++..+.. ..+.. .+++++.++ .... +.+++.+.++.++.||+||||||++|+.|+++ +..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~-a~~~---~~~~v~~~~~~~~~~d~lViATGs~p~~p~~~-~~~~ 158 (492)
T 3ic9_A 84 GKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGF-AKFL---DEHTLQVDDHSQVIAKRIVIATGSRPNYPEFL-AAAG 158 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESC-EEEE---ETTEEEETTTEEEEEEEEEECCCEECCCCHHH-HTTG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEE-EEEe---cCCEEEEcCCcEEEeCEEEEccCCCCcCCCCC-CccC
Confidence 111112211 11222 245566666 4333 34577777788999999999999999999876 433
Q ss_pred -cEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcE
Q psy2951 714 -KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVK 792 (1466)
Q Consensus 714 -~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~ 792 (1466)
.++ +..+...+ ...+++++|||+|++|+|+|..|++.|.+|+++++.++++ +.+++++.+.+.+.|++. |+
T Consensus 159 ~~v~---t~~~~~~~---~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-~~~d~~~~~~l~~~l~~~-V~ 230 (492)
T 3ic9_A 159 SRLL---TNDNLFEL---NDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA-NLQDEEMKRYAEKTFNEE-FY 230 (492)
T ss_dssp GGEE---CHHHHTTC---SSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT-TCCCHHHHHHHHHHHHTT-SE
T ss_pred CcEE---cHHHHhhh---hhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc-ccCCHHHHHHHHHHHhhC-cE
Confidence 333 44444333 3348999999999999999999999999999999999876 578999999999999988 99
Q ss_pred EEccceEEEEEecCCCceEEEEC--CCC--cEEecCEEEEccccccCccc--cccCCceeeCCCcEEeC-CCCCCCCCCe
Q psy2951 793 FVMKANVSSFEKNEKNDVTAANL--DNG--TTIPADLVIVGIGTVLNTNY--LDGKGVELNGQKAVVVN-EYLETNVPGV 865 (1466)
Q Consensus 793 ~~~~~~v~~i~~~~~~~~~~v~~--~~g--~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~~~G~i~vd-~~~~t~~~~i 865 (1466)
+++++++++++..+ +.+ .+.+ .+| +++++|.||+|+|++|++++ ++.+|++++++|+|.+| ++++|+.|+|
T Consensus 231 i~~~~~v~~i~~~~-~~v-~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~I 308 (492)
T 3ic9_A 231 FDAKARVISTIEKE-DAV-EVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHI 308 (492)
T ss_dssp EETTCEEEEEEECS-SSE-EEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTE
T ss_pred EEECCEEEEEEEcC-CEE-EEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCCE
Confidence 99999999998543 333 3444 366 68999999999999999988 78889999999999999 9999999999
Q ss_pred EEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCCCc----CcccCeeeeeecCceeEEeeccCCCC------
Q psy2951 866 YAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTS----LSTIPFFWTMLFGVGFRFAGYAAGHT------ 935 (1466)
Q Consensus 866 ya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~------ 935 (1466)
||+|||+..+. .++.|..||+.||.||++.... +..+| +..+++..+..+|+++...
T Consensus 309 yA~GD~~~~~~-----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p--~~~~~~p~~a~vGlte~~a~~~~g~ 375 (492)
T 3ic9_A 309 FVAGDANNTLT-----------LLHEAADDGKVAGTNAGAYPVIAQGQRRAPL--SVVFTEPQVASVGLSLRQIEDLYAD 375 (492)
T ss_dssp EECGGGGTSSC-----------SHHHHHHHHHHHHHHHHHTTSCCEECCCCCE--EEECSSSEEEEEESCHHHHHHHCSC
T ss_pred EEEEecCCCCc-----------cHHHHHHHHHHHHHHHcCCCCCcccCCCCCc--EEEECCCCeEEecCCHHHHHhccCc
Confidence 99999997654 3478999999999999973221 23333 2334567788888775210
Q ss_pred ----ceeE-ec----------ccccceEEEEEe--cCCeEEEEEeecCc
Q psy2951 936 ----QVDI-VG----------DLEALKFTAYYS--NADKVLAILTVGMD 967 (1466)
Q Consensus 936 ----~~~~-~~----------~~~~~~~~~~~~--~~~~i~g~~~~g~~ 967 (1466)
+... .. .-++..|+|+++ ++++++|++++|.+
T Consensus 376 ~~g~~~~~~~~~~~~~~~a~~~~~~~g~~kli~~~~~~~ilG~~~~g~~ 424 (492)
T 3ic9_A 376 QDAANYVVGQVSFEGQGRSRVMGKNKGLLNVYADRTSGEFLGAEMFGPA 424 (492)
T ss_dssp SSSCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETT
T ss_pred cCCccEEEEEEEeccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCC
Confidence 1111 00 113457899988 57999999999987
No 102
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.98 E-value=2.6e-31 Score=336.46 Aligned_cols=350 Identities=21% Similarity=0.268 Sum_probs=249.5
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCC--------CCCCCCc---cch-----------------hcc
Q psy2951 593 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENF--------LPYDRVK---LSK-----------------QLD 644 (1466)
Q Consensus 593 ~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~--------~~~~~~~---~~~-----------------~~~ 644 (1466)
...+||+||||||||++||..|+++|++ |+++|+... +++.... .+. .++
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~--v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g 182 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAK--TAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFG 182 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCC--EEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCe--EEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCC
Confidence 4568999999999999999999999988 778886311 1110000 000 000
Q ss_pred ---------cCcccccccC-----------HhHhhhCCcEEEEceEEEEeccccccEEEccCC--CEEecCEEEEcCCCC
Q psy2951 645 ---------IKADSILLRT-----------EEFYKDNDIHVIKGKKIISDSELNEKKIKLQDG--TSIDFTKIYLATGSS 702 (1466)
Q Consensus 645 ---------~~~~~~~~~~-----------~~~~~~~gv~~~~~~~v~~i~~~~~~~v~~~~~--~~~~~d~lviAtG~~ 702 (1466)
.+..++..+. ...+...+|+++.+. +..+ +.....+...+| .++.||+||||||++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~-~~~~-~~~~v~v~~~~g~~~~~~~d~lviAtGs~ 260 (598)
T 2x8g_A 183 WSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAK-GRLI-SPHEVQITDKNQKVSTITGNKIILATGER 260 (598)
T ss_dssp CCCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEEE-ETTEEEEECTTCCEEEEEEEEEEECCCEE
T ss_pred ccccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEE-EEEc-CCCEEEEEeCCCCeEEEEeCEEEEeCCCC
Confidence 0111111111 122456799998876 5566 555555555556 469999999999999
Q ss_pred CCcCCCCCCCC-cEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHH
Q psy2951 703 PRTISQADGVN-KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGER 781 (1466)
Q Consensus 703 ~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~ 781 (1466)
|+.|++| |.+ ... +..+... ....+++|+|||+|++|+|+|..|+++|.+||++++. . +.+.+++++.+.
T Consensus 261 p~~p~i~-G~~~~~~---~~~~~~~---~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~-~l~~~d~~~~~~ 331 (598)
T 2x8g_A 261 PKYPEIP-GAVEYGI---TSDDLFS---LPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-I-LLRGFDQQMAEK 331 (598)
T ss_dssp ECCCSST-THHHHCE---EHHHHTT---CSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-C-SSTTSCHHHHHH
T ss_pred CCCCCCC-CcccceE---cHHHHhh---CccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-c-CcCcCCHHHHHH
Confidence 9999999 865 222 2333322 2235789999999999999999999999999999998 3 346688999999
Q ss_pred HHHHHHhcCcEEEccceEEEEEec-----CC---Cce-EEEECCCCcEEe--cCEEEEccccccCccc--cccCCceeeC
Q psy2951 782 ITKLFESKGVKFVMKANVSSFEKN-----EK---NDV-TAANLDNGTTIP--ADLVIVGIGTVLNTNY--LDGKGVELNG 848 (1466)
Q Consensus 782 ~~~~l~~~gv~~~~~~~v~~i~~~-----~~---~~~-~~v~~~~g~~i~--~D~vi~a~G~~p~~~~--~~~~gl~~~~ 848 (1466)
+.+.++++||+++++..++++... ++ +.+ ..+.+.+|++++ +|.||+|+|++|++++ ++..|+++++
T Consensus 332 ~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~ 411 (598)
T 2x8g_A 332 VGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDK 411 (598)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCT
T ss_pred HHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCceECC
Confidence 999999999999999988888532 11 322 223346776655 9999999999999986 5778999999
Q ss_pred CCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCCC---cCcccCeeeeeecCcee
Q psy2951 849 QKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT---SLSTIPFFWTMLFGVGF 925 (1466)
Q Consensus 849 ~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~~---~~~~~~~~~~~~~~~~~ 925 (1466)
+|+|.||++++|+.|+|||+|||+.... ..++.|..||+.||.+|++... .+..+|++. +++..+
T Consensus 412 ~G~i~vd~~~~ts~~~VyA~GD~~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~--~~~~~~ 479 (598)
T 2x8g_A 412 NGRVVCTDDEQTTVSNVYAIGDINAGKP----------QLTPVAIQAGRYLARRLFAGATELTDYSNVATTV--FTPLEY 479 (598)
T ss_dssp TSCBCCCTTSBCSSTTEEECGGGBTTSC----------CCHHHHHHHHHHHHHHHHHCCCCCCCCTTCCEEE--CSSSCE
T ss_pred CCcEEeCCCCcCCCCCEEEEeeecCCCC----------ccHHHHHHhHHHHHHHHhcCCCcccCCCCCcEEE--ECCCce
Confidence 9999999999999999999999964321 2457899999999999997543 355566433 556667
Q ss_pred EEeeccCCC-------CceeEe------------cccccceEEEEEec---CCeEEEEEeecCc
Q psy2951 926 RFAGYAAGH-------TQVDIV------------GDLEALKFTAYYSN---ADKVLAILTVGMD 967 (1466)
Q Consensus 926 ~~~g~~~~~-------~~~~~~------------~~~~~~~~~~~~~~---~~~i~g~~~~g~~ 967 (1466)
..+|+++.. ...... .......|.|++++ +++++|++++|..
T Consensus 480 a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~ilG~~~~g~~ 543 (598)
T 2x8g_A 480 GACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPN 543 (598)
T ss_dssp EEEECCHHHHHHHHCGGGEEEEEEEECCTHHHHTTCCSSCEEEEEEEETTTTTEEEEEEEESTT
T ss_pred EEEeCCHHHHHhhCCCCcEEEEEEeccchhHHhhcCCCCcEEEEEEEecCCCCEEEEEEEECCC
Confidence 778876421 011110 00124568898883 6999999999986
No 103
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.98 E-value=3.7e-32 Score=329.06 Aligned_cols=298 Identities=17% Similarity=0.209 Sum_probs=230.4
Q ss_pred CcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc--cCcccccccChhhhccCCcEEEcCCeEEE
Q psy2951 1067 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD--IKADSILLRTEEFYKDNDIHVIKGKKIIS 1144 (1466)
Q Consensus 1067 ~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~v~~ 1144 (1466)
++|||||||+||++||..|++.+.+.+|||||+++++.|. |.+..... .+.+++..+..+++++.+|+++.++ |+.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~-p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~~-v~~ 80 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT-PAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEK-AES 80 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG-GGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSC-EEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccC-ccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEeE-EEE
Confidence 5799999999999999999998877899999999998884 44433322 4566666677788888899999886 999
Q ss_pred eecCCCCeEEecCCcEEecCeEEEecCCCCCcCCCCCCCC-cEEEecCHHHHHhhhcccC---CCCeEEEEcCCH-----
Q psy2951 1145 DSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-KVFYLRTVEDANNIAPHIT---PESNVVVIGSSF----- 1215 (1466)
Q Consensus 1145 i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~-~v~~~~~~~~~~~l~~~~~---~~~~vvVvG~g~----- 1215 (1466)
| |+++++|++++|++++||+||||||+++. +++| |.+ +.+.+++.+++.++++.+. .++.++|+|++.
T Consensus 81 I-d~~~~~V~~~~g~~i~YD~LViAtG~~~~-~~i~-G~~e~~~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~ 157 (430)
T 3hyw_A 81 I-DPDANTVTTQSGKKIEYDYLVIATGPKLV-FGAE-GQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCF 157 (430)
T ss_dssp E-ETTTTEEEETTCCEEECSEEEECCCCEEE-CCSB-THHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCC
T ss_pred E-ECCCCEEEECCCCEEECCEEEEeCCCCcc-CCcc-CcccCcCCcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEh
Confidence 9 99999999999999999999999999865 4688 876 6777889999988877653 355566666542
Q ss_pred -----HHHHHHHHHhcCC----CeEEEEcCCCcC--CcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEE
Q psy2951 1216 -----IGMEAAAFCASKV----KSVTVVGRGAVP--FQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAA 1284 (1466)
Q Consensus 1216 -----~g~e~a~~l~~~g----~~v~vv~~~~~~--~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v 1284 (1466)
.++.++..+++++ .+|++++..+.. +.....+...+.+.+.++++||++++++.|++++ .+ + ..+
T Consensus 158 ~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~--~~-~-~~~ 233 (430)
T 3hyw_A 158 GPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIE--PD-K-VIY 233 (430)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEEC--SS-E-EEE
T ss_pred HHHHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceEEEEe--CC-c-eEE
Confidence 2334445566665 478998877644 2234456778889999999999999999999997 22 2 224
Q ss_pred EcCCC--CeeecCEEEEeeccccCccccccCC--ceeeCCCeEEeCCCcc-ccCCCEEEecccccCCCccCCCcee---e
Q psy2951 1285 NLDNG--TTIPADLVIVGIGTVLNTNYLDGKG--VELNGQKAVVVNEYLE-TNVPGVYAGGDIAYAPLHSFYNKNA---S 1356 (1466)
Q Consensus 1285 ~l~~g--~~i~~D~vv~a~G~~p~~~~~~~~g--l~~~~~G~i~vd~~~~-t~~~~v~a~GD~a~~p~~~~~~~~~---~ 1356 (1466)
...+| +++++|++++++|..|+ +++..++ +..+.+|++.||++|| |++|||||+|||+..|... +.+. .
T Consensus 234 ~~~~g~~~~i~~d~vi~~~G~~~~-~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~--~~~~~~~~ 310 (430)
T 3hyw_A 234 EDLNGNTHEVPAKFTMFMPSFQGP-EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIE--KTPIPTGV 310 (430)
T ss_dssp ECTTSCEEEEECSEEEEECEEECC-HHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSS--CCSSCCCC
T ss_pred EeeCCCceEeecceEEEeccCCCc-hHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEecCCcc--cCcCcCcc
Confidence 44444 57999999999999998 5666555 4445567799999999 7899999999999988642 2111 1
Q ss_pred eecHHHHHHHHHHHHHHhcC
Q psy2951 1357 IGHYQLAQYHGRIAALNMVE 1376 (1466)
Q Consensus 1357 ~~~~~~A~~qa~~aa~~i~g 1376 (1466)
....+.|.+||+++|+||+.
T Consensus 311 pk~a~~A~~qg~~~A~Ni~~ 330 (430)
T 3hyw_A 311 PKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp CCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHH
Confidence 23457899999999999995
No 104
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.97 E-value=2.1e-31 Score=316.80 Aligned_cols=300 Identities=21% Similarity=0.295 Sum_probs=225.2
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCC------------CCCCCchhhccCcccccccChhhhccCC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY------------DRVKLSKQLDIKADSILLRTEEFYKDND 1133 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 1133 (1466)
+++|+|||||+||+++|..|++.|+ +|+|||+++.++. +.+.+.. .....+.....+.+.+.+
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~--~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~ 88 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNI--SCRIIESMPQLGGQLAALYPEKHIYDVAGFPE---VPAIDLVESLWAQAERYN 88 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC--CEEEECSSSSSCHHHHHTCTTSEECCSTTCSS---EEHHHHHHHHHHHHHTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC--CEEEEecCCCCCCcccccCCCcccccCCCCCC---CCHHHHHHHHHHHHHHhC
Confidence 5789999999999999999999998 9999999875431 1111110 011111112223455678
Q ss_pred cEEEcCCeEEEeecCCCC---eEEecCCcEEecCeEEEecCC---CCCcCCCCCC-CC-----cEEE-ecCHHHHHhhhc
Q psy2951 1134 IHVIKGKKIISDSELNEK---KIKLQDGTSIDFTKIYLATGS---SPRTISQADG-VN-----KVFY-LRTVEDANNIAP 1200 (1466)
Q Consensus 1134 v~~~~~~~v~~i~d~~~~---~v~~~~g~~~~yd~lvlAtG~---~~~~~~~~~g-~~-----~v~~-~~~~~~~~~l~~ 1200 (1466)
++++.+++|+.+ +...+ .|.+.+|.++.||+||+|||+ .|+.++++ | .+ ++++ +++.++ +
T Consensus 89 ~~~~~~~~v~~i-~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~-g~~~~~~~~~v~~~~~~~~~---~-- 161 (360)
T 3ab1_A 89 PDVVLNETVTKY-TKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQL-GNIDHLTGSSVYYAVKSVED---F-- 161 (360)
T ss_dssp CEEECSCCEEEE-EECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGG-CCCTTTBTTTEESSCSCGGG---G--
T ss_pred CEEEcCCEEEEE-EECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCC-CchhhCcCceEEEecCCHHH---c--
Confidence 999999999999 86543 688888889999999999999 67777777 7 43 2433 222211 1
Q ss_pred ccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCc
Q psy2951 1201 HITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKND 1280 (1466)
Q Consensus 1201 ~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~ 1280 (1466)
.+++|+|||+|.+|+|+|..|++.+.+|+++++.+.++. .+...+.+.+.+++.||++++++++++++ .++++
T Consensus 162 ---~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---~~~~~~~l~~~~~~~gv~i~~~~~v~~i~-~~~~~ 234 (360)
T 3ab1_A 162 ---KGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG---HGKTAHEVERARANGTIDVYLETEVASIE-ESNGV 234 (360)
T ss_dssp ---TTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS---CSHHHHSSHHHHHHTSEEEESSEEEEEEE-EETTE
T ss_pred ---CCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC---CHHHHHHHHHHhhcCceEEEcCcCHHHhc-cCCCc
Confidence 378999999999999999999999999999999876553 24566778888899999999999999998 44556
Q ss_pred EEEEEcC--CC--CeeecCEEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceee
Q psy2951 1281 VTAANLD--NG--TTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNAS 1356 (1466)
Q Consensus 1281 ~~~v~l~--~g--~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~ 1356 (1466)
+..|.+. +| +++++|.||+++|..|++++++..++.++ +|+|.||++++|+.|+|||+|||+..+..
T Consensus 235 v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~-~g~i~vd~~~~t~~~~vya~GD~~~~~~~-------- 305 (360)
T 3ab1_A 235 LTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELY-ENALVVDSHMKTSVDGLYAAGDIAYYPGK-------- 305 (360)
T ss_dssp EEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEE-TTEEECCTTSBCSSTTEEECSTTEECTTC--------
T ss_pred eEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccccc-cCeeeecCCCcCCCCCEEEecCccCCCCc--------
Confidence 6567664 77 57899999999999999999999999888 68999999999999999999999987532
Q ss_pred eecHHHHHHHHHHHHHHhcCCCCCCCC-Cccceecccc
Q psy2951 1357 IGHYQLAQYHGRIAALNMVEKKTSLST-IPFFWTMLFG 1393 (1466)
Q Consensus 1357 ~~~~~~A~~qa~~aa~~i~g~~~~~~~-~p~~w~~~~~ 1393 (1466)
...+..|..||+.||.||++...+... .|+|||.++.
T Consensus 306 ~~~~~~A~~~g~~aa~~i~~~l~~~~~~~~~~~~~~~~ 343 (360)
T 3ab1_A 306 LKIIQTGLSEATMAVRHSLSYIKPGEKIRNVFSSVKMA 343 (360)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHSCC-------------
T ss_pred cceeehhHHHHHHHHHHHHhhcCCccccCceeccchhh
Confidence 235689999999999999975444444 3555666443
No 105
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.97 E-value=3e-31 Score=312.51 Aligned_cols=296 Identities=18% Similarity=0.226 Sum_probs=229.9
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCC------------CCCCCchhhccCcccccccChhhhccCC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY------------DRVKLSKQLDIKADSILLRTEEFYKDND 1133 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 1133 (1466)
+++|+|||||+||+++|..|++.|. +|+|||+++.++. +.+.+.. .....+.....+.+++.+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~--~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~ 79 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGL--SFRFVDPLPEPGGQLTALYPEKYIYDVAGFPK---VYAKDLVKGLVEQVAPFN 79 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC--CEEEEESSSSSCHHHHHTCTTSEECCSTTCSS---EEHHHHHHHHHHHHGGGC
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCC--CEEEEeCCCCCCCeeeccCCCceeeccCCCCC---CCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999998 9999999875431 1111100 011112112223455668
Q ss_pred cEEEcCCeEEEeecCCC--CeEEecCCcEEecCeEEEecCC---CCCcCCCCCCCC-----cEEE-ecCHHHHHhhhccc
Q psy2951 1134 IHVIKGKKIISDSELNE--KKIKLQDGTSIDFTKIYLATGS---SPRTISQADGVN-----KVFY-LRTVEDANNIAPHI 1202 (1466)
Q Consensus 1134 v~~~~~~~v~~i~d~~~--~~v~~~~g~~~~yd~lvlAtG~---~~~~~~~~~g~~-----~v~~-~~~~~~~~~l~~~~ 1202 (1466)
++++.+++|..+ +... ..|.+.++.++.||+||+|||+ .|+.++++ |.+ ++++ +++.++ +
T Consensus 80 ~~~~~~~~v~~i-~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~-g~~~~~~~~~~~~~~~~~~---~---- 150 (335)
T 2zbw_A 80 PVYSLGERAETL-EREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAP-GEREFEGRGVYYAVKSKAE---F---- 150 (335)
T ss_dssp CEEEESCCEEEE-EEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCCCT-TTTTTBTTTEESSCSCGGG---G----
T ss_pred CEEEeCCEEEEE-EECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCC-ChhhccCcEEEEecCchhh---c----
Confidence 999999999999 7654 3577778888999999999999 57777777 764 2432 222211 1
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEE
Q psy2951 1203 TPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVT 1282 (1466)
Q Consensus 1203 ~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~ 1282 (1466)
.+++|+|||+|.+|+|+|..|++.|.+|+++++.+.++. .+...+.+.+.+++.||++++++++++++ . ++++.
T Consensus 151 -~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~---~~~~~~~l~~~l~~~gv~v~~~~~v~~i~-~-~~~~~ 224 (335)
T 2zbw_A 151 -QGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA---HEASVKELMKAHEEGRLEVLTPYELRRVE-G-DERVR 224 (335)
T ss_dssp -TTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS---CHHHHHHHHHHHHTTSSEEETTEEEEEEE-E-SSSEE
T ss_pred -CCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc---cHHHHHHHHhccccCCeEEecCCcceeEc-c-CCCee
Confidence 378999999999999999999999999999999886553 35677888888999999999999999998 3 45655
Q ss_pred EEEcC---CC--CeeecCEEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeee
Q psy2951 1283 AANLD---NG--TTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASI 1357 (1466)
Q Consensus 1283 ~v~l~---~g--~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~ 1357 (1466)
.|.+. +| +++++|.||+++|..|++++++..++..+ +|++.||++++|+.|+|||+|||+..+.. .
T Consensus 225 ~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~-~g~i~vd~~~~t~~~~vya~GD~~~~~~~--------~ 295 (335)
T 2zbw_A 225 WAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALE-KNKIKVDTTMATSIPGVYACGDIVTYPGK--------L 295 (335)
T ss_dssp EEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEE-TTEEECCTTCBCSSTTEEECSTTEECTTC--------C
T ss_pred EEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceecc-CCeeeeCCCCCCCCCCEEEeccccccCcc--------h
Confidence 67765 77 67999999999999999999999999888 68899999999999999999999987542 2
Q ss_pred ecHHHHHHHHHHHHHHhcCCCCCCCCCccceec
Q psy2951 1358 GHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTM 1390 (1466)
Q Consensus 1358 ~~~~~A~~qa~~aa~~i~g~~~~~~~~p~~w~~ 1390 (1466)
..+..|..||+.||.||++...+....|+-|+.
T Consensus 296 ~~~~~A~~~g~~aa~~i~~~l~~~~~~~~~~~~ 328 (335)
T 2zbw_A 296 PLIVLGFGEAAIAANHAAAYANPALKVNPGHSS 328 (335)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCTTSCSSCCCGG
T ss_pred hhhhhhHHHHHHHHHHHHHHhhhhhccCCcccc
Confidence 356899999999999999765555555555554
No 106
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.97 E-value=9.4e-32 Score=310.95 Aligned_cols=285 Identities=13% Similarity=0.156 Sum_probs=208.1
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCC---CccchhcccCcccccccCHhHhhhC-CcEEEEce
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDR---VKLSKQLDIKADSILLRTEEFYKDN-DIHVIKGK 669 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-gv~~~~~~ 669 (1466)
+.+||+|||||||||+||.+|+++|++ |+++|++...+... +.+.......+.++.....+.+.++ ++.++.++
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~--v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQ--IALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKT 82 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCC--EEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECC
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCC--EEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeE
Confidence 458999999999999999999999998 77888764211100 0011111123334444444445555 56666665
Q ss_pred EEEEec--cccccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCCh-HH
Q psy2951 670 KIISDS--ELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSF-IG 746 (1466)
Q Consensus 670 ~v~~i~--~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~-~g 746 (1466)
+..+. +...+++.+.+++++.||+||||||++|+.|++| |.+.. ..+.+..+..+.....++++++|||||. .+
T Consensus 83 -~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p~i~-G~~~~-~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~ 159 (304)
T 4fk1_A 83 -VVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEFPSIP-NVREY-YGKSLFSCPYCDGWELKDQPLIIISENEDHT 159 (304)
T ss_dssp -EEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEECCSCT-THHHH-BTTTEESCHHHHSGGGTTSCEEEECCSHHHH
T ss_pred -EEEeeecCCCcEEEEECCCCEEEeCEEEEccCCcccccccc-Ccccc-ccceeeeccccchhHhcCCceeeecCCCchh
Confidence 44442 3335678888999999999999999999999999 86511 0001111111222233578888888886 56
Q ss_pred HHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEE
Q psy2951 747 MEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLV 826 (1466)
Q Consensus 747 ~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~v 826 (1466)
+|+|..+++.+.+|+++.+.+... +.+.+.|+++|++++.+. +..+. .+++.+..+.+++|+++++|.+
T Consensus 160 ~e~a~~~~~~~~~v~i~~~~~~~~---------~~~~~~l~~~g~~~~~~~-v~~~~-~~~~~~~~v~~~~g~~i~~~~~ 228 (304)
T 4fk1_A 160 LHMTKLVYNWSTDLVIATNGNELS---------QTIMDELSNKNIPVITES-IRTLQ-GEGGYLKKVEFHSGLRIERAGG 228 (304)
T ss_dssp HHHHHHHTTTCSCEEEECSSCCCC---------HHHHHHHHTTTCCEECSC-EEEEE-SGGGCCCEEEETTSCEECCCEE
T ss_pred hhHHHHHHhCCceEEEEeccccch---------hhhhhhhhccceeEeeee-EEEee-cCCCeeeeeeccccceeeecce
Confidence 899999999999999998876432 234567888999999764 77777 4556677899999999999999
Q ss_pred EEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhc
Q psy2951 827 IVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMV 904 (1466)
Q Consensus 827 i~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~ 904 (1466)
++++|.+|++.+++++|++++++|+|.||+++|||.|+|||+|||+..+.. .+..|+.||+.||..|.
T Consensus 229 vi~~g~~~~~~~~~~~g~~~~~~G~I~vd~~~~Ts~p~IyA~GDv~~~~~~----------~~~~A~~~G~~AA~~i~ 296 (304)
T 4fk1_A 229 FIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGRTSEKNIYLAGETTTQGPS----------SLIIAASQGNKAAIAIN 296 (304)
T ss_dssp EECCEEECSSCHHHHTTCCCCTTSSSCSSTTCBCSSTTEEECSHHHHTSCC----------CHHHHHHHHHHHHHHHH
T ss_pred eeeeccccCChhhhhcCeEECCCCCEEECcCCccCCCCEEEEeccCCCcch----------HHHHHHHHHHHHHHHHH
Confidence 999988888888999999999999999999999999999999999975432 24689999999998874
No 107
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.97 E-value=2.9e-31 Score=312.59 Aligned_cols=294 Identities=18% Similarity=0.221 Sum_probs=225.0
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCc------cchh---cccCcccccccCHhHhhhCCcEE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK------LSKQ---LDIKADSILLRTEEFYKDNDIHV 665 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~~gv~~ 665 (1466)
+++|+|||||+||+++|+.|++.|++ |+++|+.+.+++.... +... ......++..++.+.+.+.++++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~--v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 82 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLS--FRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVY 82 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC--EEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCC--EEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEE
Confidence 57999999999999999999999987 8888887654321100 0000 00122344555566677789999
Q ss_pred EEceEEEEecccc--ccEEEccCCCEEecCEEEEcCCC---CCCcCCCCCCCCc-----EEEecCHHHHHhhcccCCCCC
Q psy2951 666 IKGKKIISDSELN--EKKIKLQDGTSIDFTKIYLATGS---SPRTISQADGVNK-----VFYLRTVEDANNIAPHITPES 735 (1466)
Q Consensus 666 ~~~~~v~~i~~~~--~~~v~~~~~~~~~~d~lviAtG~---~~~~~~~~~g~~~-----~~~~~~~~~~~~~~~~~~~~~ 735 (1466)
+.+++|..+ +.. ...+.+.++.++.||+||+|||+ .|..|+++ |.+. +++ .+.+. . ...++
T Consensus 83 ~~~~~v~~i-~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~-g~~~~~~~~~~~--~~~~~---~--~~~~~ 153 (335)
T 2zbw_A 83 SLGERAETL-EREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAP-GEREFEGRGVYY--AVKSK---A--EFQGK 153 (335)
T ss_dssp EESCCEEEE-EEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCCCT-TTTTTBTTTEES--SCSCG---G--GGTTC
T ss_pred EeCCEEEEE-EECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCC-ChhhccCcEEEE--ecCch---h--hcCCC
Confidence 999889888 443 34577777788999999999998 57777777 7541 221 11111 1 11489
Q ss_pred cEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEEC
Q psy2951 736 NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANL 815 (1466)
Q Consensus 736 ~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~ 815 (1466)
+|+|||+|++|+|+|..|++.+.+|+++++.+.+.. .++..+.+.+.+++.||++++++.+.+++. ++++..+.+
T Consensus 154 ~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~---~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~--~~~~~~v~~ 228 (335)
T 2zbw_A 154 RVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA---HEASVKELMKAHEEGRLEVLTPYELRRVEG--DERVRWAVV 228 (335)
T ss_dssp EEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS---CHHHHHHHHHHHHTTSSEEETTEEEEEEEE--SSSEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc---cHHHHHHHHhccccCCeEEecCCcceeEcc--CCCeeEEEE
Confidence 999999999999999999999999999999886542 356777888889999999999999999985 344445555
Q ss_pred C---CC--cEEecCEEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHH
Q psy2951 816 D---NG--TTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQ 890 (1466)
Q Consensus 816 ~---~g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~ 890 (1466)
. +| +++++|.||+|+|++|++++++.++++++ +|++.+|++++|+.|+|||+|||+..+.. +..+.
T Consensus 229 ~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~-~g~i~vd~~~~t~~~~vya~GD~~~~~~~--------~~~~~ 299 (335)
T 2zbw_A 229 FHNQTQEELALEVDAVLILAGYITKLGPLANWGLALE-KNKIKVDTTMATSIPGVYACGDIVTYPGK--------LPLIV 299 (335)
T ss_dssp EETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEE-TTEEECCTTCBCSSTTEEECSTTEECTTC--------CCCHH
T ss_pred EECCCCceEEEecCEEEEeecCCCCchHhhhcceecc-CCeeeeCCCCCCCCCCEEEeccccccCcc--------hhhhh
Confidence 4 66 58999999999999999999999999887 68999999999999999999999976532 13568
Q ss_pred HHHHHHHHHHHHhccCCCcCccc
Q psy2951 891 LAQYHGRIAALNMVEKKTSLSTI 913 (1466)
Q Consensus 891 ~A~~~g~~aA~~i~~~~~~~~~~ 913 (1466)
.|..||+.+|.+|++........
T Consensus 300 ~A~~~g~~aa~~i~~~l~~~~~~ 322 (335)
T 2zbw_A 300 LGFGEAAIAANHAAAYANPALKV 322 (335)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSCS
T ss_pred hhHHHHHHHHHHHHHHhhhhhcc
Confidence 89999999999998654333333
No 108
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.97 E-value=2.6e-31 Score=309.09 Aligned_cols=283 Identities=20% Similarity=0.233 Sum_probs=208.3
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCcc-------chhcccCcccccccCHhHhhhCCcEEE
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKL-------SKQLDIKADSILLRTEEFYKDNDIHVI 666 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~gv~~~ 666 (1466)
..+||+||||||||++||.+|+++|++ |+++|+.. ++..+.. .........++..+......+.+..+.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~--V~liE~~~--~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLK--TVMIERGI--PGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQ 80 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCC--EEEEESSC--TTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCC--EEEEecCC--CCCeeecccccCCcCCccccchHHHHHHHHHHHhhcccccc
Confidence 368999999999999999999999998 77777753 1111111 100112233444555566677788888
Q ss_pred EceEEEEeccccccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCC-----cEEEecCHHHHHhhcccCCCCCcEEEEC
Q psy2951 667 KGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESNVVVIG 741 (1466)
Q Consensus 667 ~~~~v~~i~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~vvVvG 741 (1466)
.+..+... +.........++++++||+||||||++|+.|++| |.+ .+.+. .. +.....++|+|+|||
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~~~~~d~liiAtGs~~~~~~ip-G~~~~~~~~v~~~---~~---~~~~~~~~k~vvViG 152 (312)
T 4gcm_A 81 YGDIKSVE-DKGEYKVINFGNKELTAKAVIIATGAEYKKIGVP-GEQELGGRGVSYC---AV---CDGAFFKNKRLFVIG 152 (312)
T ss_dssp ECCCCEEE-ECSSCEEEECSSCEEEEEEEEECCCEEECCCCCT-TTTTTBTTTEESC---HH---HHGGGGTTCEEEEEC
T ss_pred ceeeeeee-eeecceeeccCCeEEEeceeEEcccCccCcCCCC-ChhhhCCccEEee---ec---cCccccCCCEEEEEC
Confidence 77755555 5555666667788999999999999999999999 866 22221 11 122233589999999
Q ss_pred CChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCC--ceEEEEC--CC
Q psy2951 742 SSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKN--DVTAANL--DN 817 (1466)
Q Consensus 742 ~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~--~~~~v~~--~~ 817 (1466)
+|++|+|+|..|++.|.+||++++.++++... ....+.+++.++.+.....+..+...+.. ....... .+
T Consensus 153 gG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (312)
T 4gcm_A 153 GGDSAVEEGTFLTKFADKVTIVHRRDELRAQR------ILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGS 226 (312)
T ss_dssp CSHHHHHHHHHHTTTCSEEEEECSSSSCCSCH------HHHHHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CCHHHHHHHHHHHhcCCEEEEEecccccCcch------hHHHHHHHhcCcceeeecceeeeeccccccccceeeeecCCc
Confidence 99999999999999999999999998765321 12245667888998888777766532221 1112222 33
Q ss_pred CcEEecCEEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHH
Q psy2951 818 GTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGR 897 (1466)
Q Consensus 818 g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~ 897 (1466)
+..+++|.|++++|..|+..+++..++. +++|+|.||+++|||+|+|||+|||+..+.. ++..|+.||+
T Consensus 227 ~~~~~~d~v~~~~g~~~~~~~~~~~g~~-~~~G~I~vd~~~~Ts~pgIyA~GDv~~~~~~----------~~~~A~~~G~ 295 (312)
T 4gcm_A 227 EETHEADGVFIYIGMKPLTAPFKDLGIT-NDVGYIVTKDDMTTSVPGIFAAGDVRDKGLR----------QIVTATGDGS 295 (312)
T ss_dssp EEEEECSEEEECSCEEESCGGGGGGTCB-CTTSCBCCCTTSBCSSTTEEECSTTBSCSCC----------SHHHHHHHHH
T ss_pred eeEEeeeeEEeecCCCcCchhHHhccee-cCCCeEeeCCCCccCCCCEEEEeecCCCcch----------HHHHHHHHHH
Confidence 4579999999999999999999888874 5678999999999999999999999864321 3468999999
Q ss_pred HHHHHhcc
Q psy2951 898 IAALNMVE 905 (1466)
Q Consensus 898 ~aA~~i~~ 905 (1466)
.||.+|..
T Consensus 296 ~AA~~i~~ 303 (312)
T 4gcm_A 296 IAAQSAAE 303 (312)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999863
No 109
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.97 E-value=5.9e-31 Score=306.95 Aligned_cols=287 Identities=16% Similarity=0.210 Sum_probs=209.5
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCC---CCCCCccchh------c--ccCcccccccCHhHhhhCC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFL---PYDRVKLSKQ------L--DIKADSILLRTEEFYKDND 662 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~---~~~~~~~~~~------~--~~~~~~~~~~~~~~~~~~g 662 (1466)
..+||+|||||||||+||..|+++|++ |+++|++... ++........ + ..+..++..+..+.+.+.+
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~--v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~ 80 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLK--PVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYG 80 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC--CEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCC--EEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcC
Confidence 468999999999999999999999998 6777776421 1111110000 0 1233445566667778889
Q ss_pred cEEEEceEEEEe-ccccccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCC--cEEEecCHHHHHhhcccCCCCCcEEE
Q psy2951 663 IHVIKGKKIISD-SELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHITPESNVVV 739 (1466)
Q Consensus 663 v~~~~~~~v~~i-~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~vvV 739 (1466)
+++...+ +... .+.....+.+.++.++.||+||||||++|+.|++| |.+ .............. ....++++++|
T Consensus 81 ~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~~ip-G~~~~~~~~~~~~~~~~~~-~~~~~~~~vvV 157 (314)
T 4a5l_A 81 TTIITET-IDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVP-GEDKYWQNGVSACAICDGA-VPIFRNKVLMV 157 (314)
T ss_dssp CEEECCC-EEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECCCCCT-THHHHBTTTEESCHHHHTT-SGGGTTSEEEE
T ss_pred cEEEEeE-EEEeecCCCceEEEECCCeEEEEeEEEEcccccccccCCC-ccccccccceeeehhhhhh-hhhcCCCeEEE
Confidence 9988877 4443 23445567777889999999999999999999999 876 11111122222222 22335899999
Q ss_pred ECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEE-----
Q psy2951 740 IGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAAN----- 814 (1466)
Q Consensus 740 vG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~----- 814 (1466)
||+|++|+|+|..|+++|.+||+++|.+.... ... ...+.+...+++.+....+.++... +.....+.
T Consensus 158 iGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~ 230 (314)
T 4a5l_A 158 VGGGDAAMEEALHLTKYGSKVIILHRRDAFRA---SKT---MQERVLNHPKIEVIWNSELVELEGD-GDLLNGAKIHNLV 230 (314)
T ss_dssp ECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHH---HHHHHHTCTTEEEECSEEEEEEEES-SSSEEEEEEEETT
T ss_pred ECCChHHHHHHHHHHHhCCeeeeecccccccc---cch---hhhhhhcccceeeEeeeeeEEEEee-eeccceeEEeecc
Confidence 99999999999999999999999998875442 222 2344556778999999998888743 32232222
Q ss_pred CCCCcEEecCEEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHH
Q psy2951 815 LDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQY 894 (1466)
Q Consensus 815 ~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~ 894 (1466)
..+++++++|.|++++|++||+++++. ++.++++|++ +|+++|||.|+|||+|||+..+.. .+..|+.
T Consensus 231 ~~~~~~i~~d~vi~a~G~~pn~~~l~~-~~~~~~~G~i-v~~~~~Ts~pgIyA~GDv~~~~~~----------~~~~A~~ 298 (314)
T 4a5l_A 231 SGEYKVVPVAGLFYAIGHSPNSKFLGG-QVKTADDGYI-LTEGPKTSVDGVFACGDVCDRVYR----------QAIVAAG 298 (314)
T ss_dssp TCCEEEEECSEEEECSCEEESCGGGTT-SSCBCTTSCB-CCBTTBCSSTTEEECSTTTCSSCC----------CHHHHHH
T ss_pred cccceeeccccceEecccccChhHhcc-cceEcCCeeE-eCCCCccCCCCEEEEEeccCCcch----------HHHHHHH
Confidence 345668999999999999999999865 4778888876 888999999999999999987642 2457999
Q ss_pred HHHHHHHHhc
Q psy2951 895 HGRIAALNMV 904 (1466)
Q Consensus 895 ~g~~aA~~i~ 904 (1466)
||+.||.++.
T Consensus 299 ~G~~AA~~~~ 308 (314)
T 4a5l_A 299 SGCMAALSCE 308 (314)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999874
No 110
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.97 E-value=5.5e-31 Score=313.16 Aligned_cols=298 Identities=21% Similarity=0.266 Sum_probs=224.1
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCcc------chhc---ccCcccccccCHhHhhhCCcEE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKL------SKQL---DIKADSILLRTEEFYKDNDIHV 665 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~gv~~ 665 (1466)
.+||+||||||||+++|+.|++.|++ |+++|+.+.+++..... .... .....++..++.+.+.+.++++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~--v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 91 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNIS--CRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDV 91 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC--EEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCC--EEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEE
Confidence 58999999999999999999999987 88999876543211000 0000 0122444555566677789999
Q ss_pred EEceEEEEecccc---ccEEEccCCCEEecCEEEEcCCC---CCCcCCCCCC-CC-----cEEEecCHHHHHhhcccCCC
Q psy2951 666 IKGKKIISDSELN---EKKIKLQDGTSIDFTKIYLATGS---SPRTISQADG-VN-----KVFYLRTVEDANNIAPHITP 733 (1466)
Q Consensus 666 ~~~~~v~~i~~~~---~~~v~~~~~~~~~~d~lviAtG~---~~~~~~~~~g-~~-----~~~~~~~~~~~~~~~~~~~~ 733 (1466)
+.+++|..+ +.. ...+.+.++.++.||+||+|||+ .|..++++ | .+ .+++ ...+. .. ..
T Consensus 92 ~~~~~v~~i-~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~-g~~~~~~~~~v~~--~~~~~---~~--~~ 162 (360)
T 3ab1_A 92 VLNETVTKY-TKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQL-GNIDHLTGSSVYY--AVKSV---ED--FK 162 (360)
T ss_dssp ECSCCEEEE-EECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGG-CCCTTTBTTTEES--SCSCG---GG--GT
T ss_pred EcCCEEEEE-EECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCC-CchhhCcCceEEE--ecCCH---HH--cC
Confidence 999889888 443 34677778889999999999998 57777777 7 43 1221 11111 11 14
Q ss_pred CCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEE
Q psy2951 734 ESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAA 813 (1466)
Q Consensus 734 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v 813 (1466)
+++|+|||+|++|+|+|..|++.+.+|+++++.+.+.. .+...+.+.+.+++.||++++++++++++.. ++++..+
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~-~~~v~~v 238 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG---HGKTAHEVERARANGTIDVYLETEVASIEES-NGVLTRV 238 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS---CSHHHHSSHHHHHHTSEEEESSEEEEEEEEE-TTEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC---CHHHHHHHHHHhhcCceEEEcCcCHHHhccC-CCceEEE
Confidence 89999999999999999999999999999999876542 2355667788888999999999999999843 4444455
Q ss_pred ECC--CC--cEEecCEEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccH
Q psy2951 814 NLD--NG--TTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHY 889 (1466)
Q Consensus 814 ~~~--~g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~ 889 (1466)
.+. +| +++++|.||+|+|++|++++++..+++++ +|+|.||++++|+.|+|||+|||+..+.. +..+
T Consensus 239 ~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~-~g~i~vd~~~~t~~~~vya~GD~~~~~~~--------~~~~ 309 (360)
T 3ab1_A 239 HLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELY-ENALVVDSHMKTSVDGLYAAGDIAYYPGK--------LKII 309 (360)
T ss_dssp EEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEE-TTEEECCTTSBCSSTTEEECSTTEECTTC--------CCSH
T ss_pred EEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccccc-cCeeeecCCCcCCCCCEEEecCccCCCCc--------ccee
Confidence 553 66 57999999999999999999998899887 78999999999999999999999976531 2366
Q ss_pred HHHHHHHHHHHHHhccCCCcCcccCee
Q psy2951 890 QLAQYHGRIAALNMVEKKTSLSTIPFF 916 (1466)
Q Consensus 890 ~~A~~~g~~aA~~i~~~~~~~~~~~~~ 916 (1466)
..|..||+.||.+|++.....+..|++
T Consensus 310 ~~A~~~g~~aa~~i~~~l~~~~~~~~~ 336 (360)
T 3ab1_A 310 QTGLSEATMAVRHSLSYIKPGEKIRNV 336 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHSCC------
T ss_pred ehhHHHHHHHHHHHHhhcCCccccCce
Confidence 889999999999998654444444443
No 111
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.97 E-value=2.5e-31 Score=321.82 Aligned_cols=302 Identities=17% Similarity=0.192 Sum_probs=228.9
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc-cCcccccccCHhHhhhCCcEEEEceEEEEe
Q psy2951 596 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD-IKADSILLRTEEFYKDNDIHVIKGKKIISD 674 (1466)
Q Consensus 596 ~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i 674 (1466)
++|||||||+||++||..|++++.+.+|+++++++++.|.........+ .+.+++...+.+++++.||+++.++ |+.+
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~~-v~~I 81 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEK-AESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSC-EEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEeE-EEEE
Confidence 6899999999999999999999988899999999887774322211122 5667777778888888999999997 9999
Q ss_pred ccccccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCC-cEEEecCHHHHHhhcccCC---CCCcEEEECCCh------
Q psy2951 675 SELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-KVFYLRTVEDANNIAPHIT---PESNVVVIGSSF------ 744 (1466)
Q Consensus 675 ~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~---~~~~vvVvG~G~------ 744 (1466)
|+++++|++++|++++||+||||||+++. +++| |.+ +.+.+.+.+++.++.+.+. .++.++|+|++.
T Consensus 82 -d~~~~~V~~~~g~~i~YD~LViAtG~~~~-~~i~-G~~e~~~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~ 158 (430)
T 3hyw_A 82 -DPDANTVTTQSGKKIEYDYLVIATGPKLV-FGAE-GQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFG 158 (430)
T ss_dssp -ETTTTEEEETTCCEEECSEEEECCCCEEE-CCSB-THHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCH
T ss_pred -ECCCCEEEECCCCEEECCEEEEeCCCCcc-CCcc-CcccCcCCcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhH
Confidence 99999999999999999999999999864 4677 765 6667788888877655432 245566666542
Q ss_pred HHHHH----HHHHhccC----CeEEEEeecCcc--CccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEE
Q psy2951 745 IGMEA----AAFCASKV----KSVTVVGRGAVP--FQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAAN 814 (1466)
Q Consensus 745 ~g~e~----A~~l~~~g----~~V~lv~~~~~~--~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~ 814 (1466)
.+.|+ +..+++.+ .+|+++...+.. +.....+...+.+++.++++||++++++.+++++.+ ++ .+.
T Consensus 159 ~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~~---~~-~~~ 234 (430)
T 3hyw_A 159 PAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPD---KV-IYE 234 (430)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECSS---EE-EEE
T ss_pred HHHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceEEEEeCC---ce-EEE
Confidence 23344 34455554 578888877643 223445677788999999999999999999999732 22 334
Q ss_pred CCC--CcEEecCEEEEccccccCccccccCC--ceeeCCCcEEeCCCCC-CCCCCeEEeccccccCCcccCCce-eeecc
Q psy2951 815 LDN--GTTIPADLVIVGIGTVLNTNYLDGKG--VELNGQKAVVVNEYLE-TNVPGVYAGGDIAYAPLHSFYNKN-ASIGH 888 (1466)
Q Consensus 815 ~~~--g~~i~~D~vi~a~G~~p~~~~~~~~g--l~~~~~G~i~vd~~~~-t~~~~iya~GD~~~~~~~~~~~~~-~~~~~ 888 (1466)
..+ ++++++|++++++|.+|+ +++...+ +..+.+|++.+|++|| |++|||||+|||+..|.......+ ..++.
T Consensus 235 ~~~g~~~~i~~d~vi~~~G~~~~-~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~ 313 (430)
T 3hyw_A 235 DLNGNTHEVPAKFTMFMPSFQGP-EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKT 313 (430)
T ss_dssp CTTSCEEEEECSEEEEECEEECC-HHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCC
T ss_pred eeCCCceEeecceEEEeccCCCc-hHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchH
Confidence 434 358999999999999998 4555544 4445668899999999 899999999999988754311111 23467
Q ss_pred HHHHHHHHHHHHHHhccC
Q psy2951 889 YQLAQYHGRIAALNMVEK 906 (1466)
Q Consensus 889 ~~~A~~~g~~aA~~i~~~ 906 (1466)
++.|.+||+.+|+||+..
T Consensus 314 a~~A~~qg~~~A~Ni~~~ 331 (430)
T 3hyw_A 314 GMMIEQMAMAVAHNIVND 331 (430)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 889999999999999853
No 112
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.97 E-value=3.3e-31 Score=322.12 Aligned_cols=301 Identities=15% Similarity=0.194 Sum_probs=233.4
Q ss_pred CCcEEEECCchHHHHHHHHHHh---cCCCCcEEEEcCCCCCCCCCCCCchhhc--cCcccccccChhhhccCCcEEEcCC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQ---NGFTGKLYFITDENFLPYDRVKLSKQLD--IKADSILLRTEEFYKDNDIHVIKGK 1140 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~---~g~~~~i~li~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~ 1140 (1466)
+++|||||||+||+++|..|++ .+. +|+|||++++.+|.. .+..... ...+++.....+++++.+++++.+
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~--~Vtlie~~~~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~~- 79 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGH--EVTLISANDYFQFVP-SNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQ- 79 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGS--EEEEECSSSEEECGG-GHHHHHHTSSCHHHHEEECHHHHHTTTCEEECS-
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcC--EEEEEeCCCCCcccC-CccccccCccCHHHHHHHHHHHHHHCCCEEEEe-
Confidence 6799999999999999999999 676 999999999877642 2221111 344555566677888889999865
Q ss_pred eEEEeecCCCCeEEecCCcEEecCeEEEecCCCCCcCCCCCCCC----cEEEecCHHHHHhhhcccCC---CCeEEEEcC
Q psy2951 1141 KIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN----KVFYLRTVEDANNIAPHITP---ESNVVVIGS 1213 (1466)
Q Consensus 1141 ~v~~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~----~v~~~~~~~~~~~l~~~~~~---~~~vvVvG~ 1213 (1466)
+|+.+ |++.++|.++++.++.||+||+|||++|+.+++| |++ +.+.+.+.+++.++++.+.. +++++|||+
T Consensus 80 ~v~~i-d~~~~~V~~~~g~~i~~d~lviAtG~~~~~~~ip-G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGg 157 (437)
T 3sx6_A 80 SAEQI-DAEAQNITLADGNTVHYDYLMIATGPKLAFENVP-GSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGA 157 (437)
T ss_dssp CEEEE-ETTTTEEEETTSCEEECSEEEECCCCEECGGGST-TCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEE
T ss_pred EEEEE-EcCCCEEEECCCCEEECCEEEECCCCCcCcccCC-CCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEc
Confidence 59999 9999999999999999999999999999998898 876 46677789998887764432 456788888
Q ss_pred CH----HH--HHHH----HHHhcCCCe-----EEEEcCCCcCCccccc--HHHHHHHHHHHHhCCcEEEcCceEEEEEec
Q psy2951 1214 SF----IG--MEAA----AFCASKVKS-----VTVVGRGAVPFQESLG--KEVGERITKLFESKGVKFVMKANVSSFEKN 1276 (1466)
Q Consensus 1214 g~----~g--~e~a----~~l~~~g~~-----v~vv~~~~~~~~~~~~--~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~ 1276 (1466)
|. +| +|+| ..+++.|.+ |+++++.+.+....++ ++..+.+.+.++++||+++++++|++++ .
T Consensus 158 G~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~~~~~~~v~~v~-~ 236 (437)
T 3sx6_A 158 MAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVE-D 236 (437)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCEEECSEEEEEEE-T
T ss_pred CCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCCCEEEcCCEEEEEE-C
Confidence 54 44 7766 667777864 9999998866332222 3577889999999999999999999998 3
Q ss_pred CCCcEEEEEcCC-----CCeeecCEEEEeeccccCccccccCCceeeCCCeEEeCCCccc-cCCCEEEecccccCCCccC
Q psy2951 1277 EKNDVTAANLDN-----GTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLET-NVPGVYAGGDIAYAPLHSF 1350 (1466)
Q Consensus 1277 ~~g~~~~v~l~~-----g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t-~~~~v~a~GD~a~~p~~~~ 1350 (1466)
++........+ ++++++|.+++++|..++..+.+.+|+ .+++|+|.||+++|| ++|+|||+|||+..+...
T Consensus 237 -~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl-~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~- 313 (437)
T 3sx6_A 237 -NKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGL-CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVE- 313 (437)
T ss_dssp -TEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTT-BCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSC-
T ss_pred -CeEEEEecccCCccccceEEEEeEEEEcCCCcCchhhhccccc-cCCCCcEEeChhccCCCCCCEEEEEEEeccCCcC-
Confidence 32111112233 567999999999999888666655788 577899999999999 799999999999987531
Q ss_pred CCcee---eeecHHHHHHHHHHHHHHhcCC
Q psy2951 1351 YNKNA---SIGHYQLAQYHGRIAALNMVEK 1377 (1466)
Q Consensus 1351 ~~~~~---~~~~~~~A~~qa~~aa~~i~g~ 1377 (1466)
+.++ ...++..|..||+.||+||+..
T Consensus 314 -~~~~~~~~pk~~~~A~~qg~~aA~ni~~~ 342 (437)
T 3sx6_A 314 -TTPVPTGAPKTGYMIESMVSAAVHNIKAD 342 (437)
T ss_dssp -CCSSCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred -CCcCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 2221 2346789999999999999953
No 113
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.97 E-value=8.7e-31 Score=304.74 Aligned_cols=279 Identities=23% Similarity=0.318 Sum_probs=213.5
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCC---ccchhc---ccCcccccccCHhHhhhCCcEEEEce
Q psy2951 596 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRV---KLSKQL---DIKADSILLRTEEFYKDNDIHVIKGK 669 (1466)
Q Consensus 596 ~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~gv~~~~~~ 669 (1466)
+||+||||||||+++|..|++.|++ |+++++.. ++... .+.... .....++..++.+.+++.+++++.++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~--v~li~~~~--gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 77 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIR--TGLMGERF--GGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQ 77 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC--EEEECSST--TGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCc--EEEEeCCC--CceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccC
Confidence 6899999999999999999999988 66776531 11110 000000 01223445555667778899999997
Q ss_pred EEEEecccc-----ccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCC-----cEEEecCHHHHHhhcccCCCCCcEEE
Q psy2951 670 KIISDSELN-----EKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESNVVV 739 (1466)
Q Consensus 670 ~v~~i~~~~-----~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~vvV 739 (1466)
+|..+ +.. .+.+.++++.++.||+||+|||+.|..|+++ |.+ .++.. .. +......+++|+|
T Consensus 78 ~v~~i-~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~-g~~~~~~~~~~~~---~~---~~~~~~~~~~v~V 149 (310)
T 1fl2_A 78 SASKL-IPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVP-GEDQYRTKGVTYC---PH---CDGPLFKGKRVAV 149 (310)
T ss_dssp CEEEE-ECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCCCCT-TTTTTBTTTEESC---HH---HHGGGGBTCEEEE
T ss_pred EEEEE-EecccCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCC-ChhhcccceeEEe---cc---CcHhhcCCCEEEE
Confidence 79888 443 4677787888999999999999999888888 764 23221 11 1122335899999
Q ss_pred ECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHh-cCcEEEccceEEEEEecCCCceEEEECC--
Q psy2951 740 IGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFES-KGVKFVMKANVSSFEKNEKNDVTAANLD-- 816 (1466)
Q Consensus 740 vG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~-~gv~~~~~~~v~~i~~~~~~~~~~v~~~-- 816 (1466)
||+|++|+|+|..|++.+.+|+++++.+.+. ++ +.+.+.+++ .||+++++++++++.. +++++..+.+.
T Consensus 150 vG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~----~~~~~~l~~~~gv~v~~~~~v~~i~~-~~~~v~~v~~~~~ 221 (310)
T 1fl2_A 150 IGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK---AD----QVLQDKLRSLKNVDIILNAQTTEVKG-DGSKVVGLEYRDR 221 (310)
T ss_dssp ECCSHHHHHHHHHHHTTBSEEEEECSSSSCC---SC----HHHHHHHHTCTTEEEESSEEEEEEEE-SSSSEEEEEEEET
T ss_pred ECCCHHHHHHHHHHHHhCCEEEEEEeCcccC---cc----HHHHHHHhhCCCeEEecCCceEEEEc-CCCcEEEEEEEEC
Confidence 9999999999999999999999999988653 23 334566676 6999999999999984 34455455554
Q ss_pred -CCc--EEecCEEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHH
Q psy2951 817 -NGT--TIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQ 893 (1466)
Q Consensus 817 -~g~--~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~ 893 (1466)
+|+ ++++|.||+|+|++|++++++.. ++++++|+|.||++++|+.|+|||+|||+..+.. .+..|+
T Consensus 222 ~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~----------~~~~A~ 290 (310)
T 1fl2_A 222 VSGDIHNIELAGIFVQIGLLPNTNWLEGA-VERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYK----------QIIIAT 290 (310)
T ss_dssp TTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCBCSSTTEEECSTTBSCSSC----------CHHHHH
T ss_pred CCCcEEEEEcCEEEEeeCCccCchHHhcc-ccccCCCcEEcCCCCccCCCCEEEeecccCCcch----------hhhhhH
Confidence 353 78999999999999999888764 7888889999999999999999999999987532 346899
Q ss_pred HHHHHHHHHhcc
Q psy2951 894 YHGRIAALNMVE 905 (1466)
Q Consensus 894 ~~g~~aA~~i~~ 905 (1466)
.||+.||.+|..
T Consensus 291 ~~g~~aa~~i~~ 302 (310)
T 1fl2_A 291 GEGAKASLSAFD 302 (310)
T ss_dssp HHHHHHHHHHHH
T ss_pred hhHHHHHHHHHH
Confidence 999999999964
No 114
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.97 E-value=8e-31 Score=308.76 Aligned_cols=298 Identities=17% Similarity=0.201 Sum_probs=226.1
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCC------CCCchhhc---cCcccccccChhhhccCCcEE
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDR------VKLSKQLD---IKADSILLRTEEFYKDNDIHV 1136 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~------~~l~~~~~---~~~~~~~~~~~~~~~~~~v~~ 1136 (1466)
+++|+|||||+||+++|..|++.|+ +|+|||+++.++... ..+..... ....++.....+++++.++++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~--~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQA--SVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTI 84 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC--CEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEE
T ss_pred cceEEEECCCHHHHHHHHHHHHCCC--CEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcE
Confidence 4689999999999999999999998 999999987654111 00000000 012222223335566779999
Q ss_pred EcCCeEEEeecCCCC---eEEecCCcEEecCeEEEecCC---CCCcCCCCCCCC-----cEEEecCHHHHHhhhcccCCC
Q psy2951 1137 IKGKKIISDSELNEK---KIKLQDGTSIDFTKIYLATGS---SPRTISQADGVN-----KVFYLRTVEDANNIAPHITPE 1205 (1466)
Q Consensus 1137 ~~~~~v~~i~d~~~~---~v~~~~g~~~~yd~lvlAtG~---~~~~~~~~~g~~-----~v~~~~~~~~~~~l~~~~~~~ 1205 (1466)
+++++|+.+ +...+ .|.+++++ +.||+||+|||+ .|+.++++ |.+ .+++ .+.+...+ .+
T Consensus 85 ~~~~~v~~i-~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~~~~-g~~~~~g~~~~~--~~~~~~~~-----~~ 154 (332)
T 3lzw_A 85 CLEQAVESV-EKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPRKLELE-NAEQYEGKNLHY--FVDDLQKF-----AG 154 (332)
T ss_dssp ECSCCEEEE-EECTTSCEEEEESSEE-EEEEEEEECCTTSCCEECCCCCT-TGGGGBTTTEES--SCSCGGGG-----BT
T ss_pred EccCEEEEE-EECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCCCCCCC-ChhhccCceEEE--ecCCHHHc-----CC
Confidence 999999999 88766 78887875 999999999999 88888888 765 2333 33333322 37
Q ss_pred CeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEE
Q psy2951 1206 SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAAN 1285 (1466)
Q Consensus 1206 ~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~ 1285 (1466)
++++|||+|.+|+|+|..|++.+.+|+++++.+.... ... ..+.++++||++++++++++++ .++ ....|.
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~--~~~-----~~~~l~~~gv~~~~~~~v~~i~-~~~-~~~~v~ 225 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA--HEH-----SVENLHASKVNVLTPFVPAELI-GED-KIEQLV 225 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS--CHH-----HHHHHHHSSCEEETTEEEEEEE-CSS-SCCEEE
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc--cHH-----HHHHHhcCCeEEEeCceeeEEe-cCC-ceEEEE
Confidence 8999999999999999999999999999999886543 111 2344788999999999999998 333 344566
Q ss_pred cCC-----CCeeecCEEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecH
Q psy2951 1286 LDN-----GTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHY 1360 (1466)
Q Consensus 1286 l~~-----g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~ 1360 (1466)
+.+ ++++++|.||+++|..|++++++..|+.. .+|+|.||++++|+.|+|||+|||+..+.. ...+
T Consensus 226 ~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~--------~~~~ 296 (332)
T 3lzw_A 226 LEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDI-EKNSIVVKSTMETNIEGFFAAGDICTYEGK--------VNLI 296 (332)
T ss_dssp EEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCE-ETTEEECCTTSBCSSTTEEECGGGEECTTC--------CCCH
T ss_pred EEecCCCceEEEECCEEEEeeccCCCchHHhhcCccc-cCCeEEeCCCCceecCCEEEccceecCCCC--------cceE
Confidence 655 46789999999999999999999999998 478999999999999999999999976532 2346
Q ss_pred HHHHHHHHHHHHHhcCCCCC-CCCCccceecccc
Q psy2951 1361 QLAQYHGRIAALNMVEKKTS-LSTIPFFWTMLFG 1393 (1466)
Q Consensus 1361 ~~A~~qa~~aa~~i~g~~~~-~~~~p~~w~~~~~ 1393 (1466)
..|..||+.||.+|+..... ....|++++..+.
T Consensus 297 ~~A~~~g~~aa~~i~~~l~~~~~~~~~~s~~~~~ 330 (332)
T 3lzw_A 297 ASGFGEAPTAVNNAKAYMDPKARVQPLHSTSLFE 330 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSCSSCCCHHHHC-
T ss_pred eeehhhHHHHHHHHHHhhChhhccCCceeccccc
Confidence 89999999999999864332 2345666665443
No 115
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.97 E-value=2.4e-31 Score=321.04 Aligned_cols=292 Identities=14% Similarity=0.148 Sum_probs=229.1
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc---cCcccccccChhhhccCCcEEEcCCeE
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKADSILLRTEEFYKDNDIHVIKGKKI 1142 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~v 1142 (1466)
.++|||||||+||++||..|++.+.+.+|+|||+++++.| .+++..+. .+.+.+. ++.+.+.+++++++.++ |
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~--~p~~~~v~~g~~~~~~~~-~~~~~~~~~gv~~i~~~-v 77 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYT--CYMSNEVIGGDRELASLR-VGYDGLRAHGIQVVHDS-A 77 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEEC--STTHHHHHHTSSCGGGGE-ECSHHHHHTTCEEECSC-E
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCC--ccCHHHHhcCCCCHHHHh-hCHHHHHHCCCEEEEeE-E
Confidence 4689999999999999999999988889999998876443 33433332 3344443 34445667899999886 9
Q ss_pred EEeecCCCCeEEecCCcEEecCeEEEecCCCCCcCCCCCCCC------cEEEecCHHHHHhhhcccC---CCCeEEEEcC
Q psy2951 1143 ISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN------KVFYLRTVEDANNIAPHIT---PESNVVVIGS 1213 (1466)
Q Consensus 1143 ~~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~------~v~~~~~~~~~~~l~~~~~---~~~~vvVvG~ 1213 (1466)
+.| |+++++|.+.+|.++.||+||+|||++++.++++ |++ .++.+++.+++..+++.+. .++.+++.++
T Consensus 78 ~~i-d~~~~~v~~~~g~~i~yd~LviAtG~~~~~~~i~-G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~ 155 (401)
T 3vrd_B 78 LGI-DPDKKLVKTAGGAEFAYDRCVVAPGIDLLYDKIE-GYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPP 155 (401)
T ss_dssp EEE-ETTTTEEEETTSCEEECSEEEECCCEEECGGGSB-TCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred EEE-EccCcEEEecccceeecceeeeccCCccccCCcc-CchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecC
Confidence 999 9999999999999999999999999999999998 876 4677788888888776543 3455555443
Q ss_pred C----------HHHHHHHHHHhcCC--CeEEEEcCCCcCCc-ccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCc
Q psy2951 1214 S----------FIGMEAAAFCASKV--KSVTVVGRGAVPFQ-ESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKND 1280 (1466)
Q Consensus 1214 g----------~~g~e~a~~l~~~g--~~v~vv~~~~~~~~-~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~ 1280 (1466)
+ -++++++..+++.+ .+|+++++.+.+.. ..+.+.+.+.+.+.++++||+++++.++..++... .
T Consensus 156 ~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~--~ 233 (401)
T 3vrd_B 156 APPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDT--E 233 (401)
T ss_dssp SSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEET--T
T ss_pred CccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecc--c
Confidence 2 14567777777665 68999998876532 34556677777777889999999999998887322 3
Q ss_pred EEEEEcCCCCeeecCEEEEeeccccCccccccCCceeeCCCeEEeCCC-cc-ccCCCEEEecccccC-CCccCCCceeee
Q psy2951 1281 VTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEY-LE-TNVPGVYAGGDIAYA-PLHSFYNKNASI 1357 (1466)
Q Consensus 1281 ~~~v~l~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~-~~-t~~~~v~a~GD~a~~-p~~~~~~~~~~~ 1357 (1466)
...+++++|+++++|+|++++|..|+ ++++.+|+. +++|+|.||++ +| |++|||||+|||+.. |.+.
T Consensus 234 ~~~v~~~~g~~i~~D~vi~~~g~~~~-~~~~~~gl~-~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk-------- 303 (401)
T 3vrd_B 234 AMTVETSFGETFKAAVINLIPPQRAG-KIAQSASLT-NDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPK-------- 303 (401)
T ss_dssp TTEEEETTSCEEECSEEEECCCEEEC-HHHHHTTCC-CTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCB--------
T ss_pred ceEEEcCCCcEEEeeEEEEecCcCCc-hhHhhcccc-ccCCCEEECCCcceecCCCCEEEecccccCCCCCc--------
Confidence 34588999999999999999999988 688889994 67899999976 65 679999999999864 4433
Q ss_pred ecHHHHHHHHHHHHHHhcC
Q psy2951 1358 GHYQLAQYHGRIAALNMVE 1376 (1466)
Q Consensus 1358 ~~~~~A~~qa~~aa~~i~g 1376 (1466)
+.+.|..||+++|+||+.
T Consensus 304 -~a~~A~~qa~v~A~ni~~ 321 (401)
T 3vrd_B 304 -SAYSANSQAKVAAAAVVA 321 (401)
T ss_dssp -SHHHHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHHHHHH
Confidence 237899999999999984
No 116
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.97 E-value=6e-31 Score=310.69 Aligned_cols=288 Identities=17% Similarity=0.189 Sum_probs=215.9
Q ss_pred cCCCCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCC----CCCCCCCccc------h-hcccCcccccccCHhHh
Q psy2951 590 LSSGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN----FLPYDRVKLS------K-QLDIKADSILLRTEEFY 658 (1466)
Q Consensus 590 ~~~~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~----~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~ 658 (1466)
+....++||+|||||+|||++|+.|+++|++ |+++|+.+ ..++...... . .......++..++.+.+
T Consensus 17 ~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~--v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (338)
T 3itj_A 17 RGSHVHNKVTIIGSGPAAHTAAIYLARAEIK--PILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQS 94 (338)
T ss_dssp ----CEEEEEEECCSHHHHHHHHHHHHTTCC--CEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEECcCHHHHHHHHHHHHCCCC--EEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHH
Confidence 3445578999999999999999999999988 77788743 2221111000 0 00123345666677788
Q ss_pred hhCCcEEEEceEEEEeccccccEE--Ec---cCCCEEecCEEEEcCCCCCCcCCCCCCCC-----cEEEecCHHHHHhhc
Q psy2951 659 KDNDIHVIKGKKIISDSELNEKKI--KL---QDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIA 728 (1466)
Q Consensus 659 ~~~gv~~~~~~~v~~i~~~~~~~v--~~---~~~~~~~~d~lviAtG~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~ 728 (1466)
.+.+++++.++ |..+ +.....+ .+ .++.++.||+||+|||+.|+.|+++ |.+ .+... .......
T Consensus 95 ~~~gv~i~~~~-v~~i-~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~~~-g~~~~~~~~~~~~---~~~~~~~ 168 (338)
T 3itj_A 95 TKFGTEIITET-VSKV-DLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLP-GEETYWQKGISAC---AVCDGAV 168 (338)
T ss_dssp HHTTCEEECSC-EEEE-ECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCCCCT-THHHHBTTTEESC---HHHHTTS
T ss_pred HHcCCEEEEeE-EEEE-EEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCCCCC-CchhccCccEEEc---hhcccch
Confidence 88999999999 8888 6554433 33 3667899999999999999999888 754 22211 1111111
Q ss_pred ccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhc-CcEEEccceEEEEEecCC
Q psy2951 729 PHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESK-GVKFVMKANVSSFEKNEK 807 (1466)
Q Consensus 729 ~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~-gv~~~~~~~v~~i~~~~~ 807 (1466)
....+++++|||+|.+|+|+|..|++.+.+|+++++.+.+.. .+.+.+.+.+. ||++++++.+++++.+ +
T Consensus 169 -~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~-------~~~~~~~l~~~~gv~i~~~~~v~~i~~~-~ 239 (338)
T 3itj_A 169 -PIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA-------STIMQKRAEKNEKIEILYNTVALEAKGD-G 239 (338)
T ss_dssp -GGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------CHHHHHHHHHCTTEEEECSEEEEEEEES-S
T ss_pred -hhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------CHHHHHHHHhcCCeEEeecceeEEEEcc-c
Confidence 023589999999999999999999999999999999886553 23445556555 9999999999999843 4
Q ss_pred CceEEEECCC-----CcEEecCEEEEccccccCccccccCCceeeCCCcEEe-CCCCCCCCCCeEEeccccccCCcccCC
Q psy2951 808 NDVTAANLDN-----GTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVV-NEYLETNVPGVYAGGDIAYAPLHSFYN 881 (1466)
Q Consensus 808 ~~~~~v~~~~-----g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~v-d~~~~t~~~~iya~GD~~~~~~~~~~~ 881 (1466)
+.+..+.+.+ ++++++|.||+|+|++|++.+++. +++++++|++.+ |++++|+.|+|||+|||+..+.
T Consensus 240 ~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~-~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~----- 313 (338)
T 3itj_A 240 KLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAG-QVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKY----- 313 (338)
T ss_dssp SSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBT-TBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSC-----
T ss_pred CcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhC-ceEecCCCcEEEcCcccccCCCCEEEeeccCCCCc-----
Confidence 4455566654 468999999999999999998887 899999999995 8899999999999999997432
Q ss_pred ceeeeccHHHHHHHHHHHHHHhcc
Q psy2951 882 KNASIGHYQLAQYHGRIAALNMVE 905 (1466)
Q Consensus 882 ~~~~~~~~~~A~~~g~~aA~~i~~ 905 (1466)
..+..|+.||+.||.+|..
T Consensus 314 -----~~~~~A~~~g~~aa~~i~~ 332 (338)
T 3itj_A 314 -----RQAITSAGSGCMAALDAEK 332 (338)
T ss_dssp -----CCHHHHHHHHHHHHHHHHH
T ss_pred -----cceeeehhhhHHHHHHHHH
Confidence 2457899999999999864
No 117
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.97 E-value=1.1e-30 Score=306.39 Aligned_cols=279 Identities=22% Similarity=0.282 Sum_probs=217.3
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCC---------CCCCCCchhhccCcccccccChhhhccCCcEE
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLP---------YDRVKLSKQLDIKADSILLRTEEFYKDNDIHV 1136 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~---------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~ 1136 (1466)
+++|+|||||+||+++|..|++.|+ +|+|||++ ++ +..+.... .....+.....+++.+.++++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~--~v~lie~~--~gg~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~ 87 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYML--KTLVIGET--PGGQLTEAGIVDDYLGLIE---IQASDMIKVFNKHIEKYEVPV 87 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC--CEEEEESS--TTGGGGGCCEECCSTTSTT---EEHHHHHHHHHHHHHTTTCCE
T ss_pred ccCEEEECccHHHHHHHHHHHHCCC--cEEEEecc--CCCeecccccccccCCCCC---CCHHHHHHHHHHHHHHcCCEE
Confidence 4689999999999999999999998 89999997 11 11111110 111222222335566779999
Q ss_pred EcCCeEEEeecCCCC--eEEecCCcEEecCeEEEecCCCCCcCCCCCCCC-----cEEEecCHHHHHhhhcccCCCCeEE
Q psy2951 1137 IKGKKIISDSELNEK--KIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESNVV 1209 (1466)
Q Consensus 1137 ~~~~~v~~i~d~~~~--~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~-----~v~~~~~~~~~~~l~~~~~~~~~vv 1209 (1466)
+. ++|..+ +...+ .|.+.++.++.||+||+|||+.|+.++++ |.+ ++++.. ..+. ....+++++
T Consensus 88 ~~-~~v~~i-~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~-g~~~~~~~~~~~~~-~~~~-----~~~~~~~v~ 158 (323)
T 3f8d_A 88 LL-DIVEKI-ENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVP-GEQEFAGRGISYCS-VADA-----PLFKNRVVA 158 (323)
T ss_dssp EE-SCEEEE-EEC--CEEEEESSSCEEEEEEEEECCCCEECCCCCT-TTTTTBTTTEESCH-HHHG-----GGGTTCEEE
T ss_pred EE-EEEEEE-EecCCEEEEEECCCCEEEcCEEEECcCCCCccCCCC-chhhhcCCceEEec-cCCH-----hHcCCCEEE
Confidence 88 779999 87643 57777888999999999999999998888 765 344322 2222 223479999
Q ss_pred EEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCC-
Q psy2951 1210 VIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDN- 1288 (1466)
Q Consensus 1210 VvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~- 1288 (1466)
|||+|.+|+|+|..|++.|.+|+++++.+.++. .+ ..+.+++++.||++++++++++++ .+ +++..|.+.+
T Consensus 159 vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~---~~~~~~~~~~gv~~~~~~~v~~i~-~~-~~~~~v~~~~~ 230 (323)
T 3f8d_A 159 VIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA---QP---IYVETVKKKPNVEFVLNSVVKEIK-GD-KVVKQVVVENL 230 (323)
T ss_dssp EECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS---CH---HHHHHHHTCTTEEEECSEEEEEEE-ES-SSEEEEEEEET
T ss_pred EECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc---CH---HHHHHHHhCCCcEEEeCCEEEEEe-cc-CceeEEEEEEC
Confidence 999999999999999999999999999987664 22 233444555699999999999998 33 5666677765
Q ss_pred --CC--eeecCEEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHH
Q psy2951 1289 --GT--TIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQ 1364 (1466)
Q Consensus 1289 --g~--~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~ 1364 (1466)
|+ ++++|.||+++|..|++++++..|+.++.+|+|.||++++|+.|+|||+|||+..+. ....+..|.
T Consensus 231 ~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~--------~~~~~~~A~ 302 (323)
T 3f8d_A 231 KTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWL--------GFRQVITAV 302 (323)
T ss_dssp TTCCEEEEECSEEEECCCEECCHHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBSTTT--------TCCCHHHHH
T ss_pred CCCceEEEEcCEEEEEECCCCChhHHhhcCeeecCCCcEecCCCceecCCCEEEcceecCCCC--------cccceeehh
Confidence 76 789999999999999999999999999989999999999999999999999998641 023458999
Q ss_pred HHHHHHHHHhcC
Q psy2951 1365 YHGRIAALNMVE 1376 (1466)
Q Consensus 1365 ~qa~~aa~~i~g 1376 (1466)
.||+.||.||+.
T Consensus 303 ~~g~~aa~~i~~ 314 (323)
T 3f8d_A 303 AQGAVAATSAYR 314 (323)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 999999999874
No 118
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.97 E-value=1.5e-30 Score=301.04 Aligned_cols=274 Identities=16% Similarity=0.206 Sum_probs=213.7
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCC---CccchhcccCcccccccCHhHhhhC-CcEEEEceE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDR---VKLSKQLDIKADSILLRTEEFYKDN-DIHVIKGKK 670 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-gv~~~~~~~ 670 (1466)
++||+|||||+||+++|..|+++|++ |+++|++....... ..+.........++..++.+.+.+. +++++.++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~--v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~- 78 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKN--ILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEGR- 78 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC--EEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEESC-
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCC--EEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeE-
Confidence 47999999999999999999999987 88888764221111 1111111134455666667777776 78888775
Q ss_pred EEEecccc--ccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCC-----cEEEecCHHHHHhhcccCCCCCcEEEECCC
Q psy2951 671 IISDSELN--EKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESNVVVIGSS 743 (1466)
Q Consensus 671 v~~i~~~~--~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G 743 (1466)
|+.+ +.. .+.+.+.++.++.||+||+|||+.|+.|+++ |.+ .++... ..+ .....+++|+|||+|
T Consensus 79 v~~i-~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~~~-g~~~~~~~~~~~~~-~~~-----~~~~~~~~v~vvG~G 150 (297)
T 3fbs_A 79 VTDA-KGSFGEFIVEIDGGRRETAGRLILAMGVTDELPEIA-GLRERWGSAVFHCP-YCH-----GYELDQGKIGVIAAS 150 (297)
T ss_dssp EEEE-EEETTEEEEEETTSCEEEEEEEEECCCCEEECCCCB-TTGGGBTTTEESCH-HHH-----TGGGTTCEEEEECCS
T ss_pred EEEE-EEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCCCC-CchhhcCCeeEEcc-cCc-----chhhcCCEEEEEecC
Confidence 8888 544 3577888888999999999999999999888 765 222111 111 112248999999999
Q ss_pred hHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEec
Q psy2951 744 FIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPA 823 (1466)
Q Consensus 744 ~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~ 823 (1466)
++|+|+|..|++.| +|+++.+.+.. +. +.+.+.+++.||+++. +++++++.. + .+.+.+|+++++
T Consensus 151 ~~~~e~a~~l~~~g-~v~~v~~~~~~----~~----~~~~~~l~~~gv~i~~-~~v~~i~~~--~---~v~~~~g~~~~~ 215 (297)
T 3fbs_A 151 PMAIHHALMLPDWG-ETTFFTNGIVE----PD----ADQHALLAARGVRVET-TRIREIAGH--A---DVVLADGRSIAL 215 (297)
T ss_dssp TTHHHHHHHGGGTS-EEEEECTTTCC----CC----HHHHHHHHHTTCEEEC-SCEEEEETT--E---EEEETTSCEEEE
T ss_pred ccHHHHHHHhhhcC-cEEEEECCCCC----CC----HHHHHHHHHCCcEEEc-ceeeeeecC--C---eEEeCCCCEEEE
Confidence 99999999999999 99999988652 22 3456788899999996 899999832 2 677889999999
Q ss_pred CEEEEccccccCccccccCCceee--CCC-cEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHH
Q psy2951 824 DLVIVGIGTVLNTNYLDGKGVELN--GQK-AVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAA 900 (1466)
Q Consensus 824 D~vi~a~G~~p~~~~~~~~gl~~~--~~G-~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA 900 (1466)
|.||+++|++|++++++.++++++ +.| ++.+|++++|+.|+|||+|||+..+. .+..|+.||+.||
T Consensus 216 D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i~vd~~~~t~~~~vya~GD~~~~~~-----------~~~~A~~~g~~aa 284 (297)
T 3fbs_A 216 AGLFTQPKLRITVDWIEKLGCAVEEGPMGSTIVTDPMKQTTARGIFACGDVARPAG-----------SVALAVGDGAMAG 284 (297)
T ss_dssp SEEEECCEEECCCSCHHHHTCCEEEETTEEEECCCTTCBCSSTTEEECSGGGCTTC-----------CHHHHHHHHHHHH
T ss_pred EEEEEccCcccCchhHHhcCCccccCCCCceEEeCCCCccCCCCEEEEeecCCchH-----------HHHHHHHhHHHHH
Confidence 999999999999999998888887 457 89999999999999999999998643 4579999999999
Q ss_pred HHhcc
Q psy2951 901 LNMVE 905 (1466)
Q Consensus 901 ~~i~~ 905 (1466)
.+|..
T Consensus 285 ~~i~~ 289 (297)
T 3fbs_A 285 AAAHR 289 (297)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99864
No 119
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.97 E-value=8.4e-31 Score=307.32 Aligned_cols=282 Identities=20% Similarity=0.253 Sum_probs=217.7
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCcc------chhcccCcccccccCHhHhhhCCcEEEEc
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKL------SKQLDIKADSILLRTEEFYKDNDIHVIKG 668 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~gv~~~~~ 668 (1466)
++||+|||||+||+++|+.|+++|++ |+++|++ +++..... .........++..++.+.+++.+++++.
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~--v~lie~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~- 89 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLK--TLVIGET--PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL- 89 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC--EEEEESS--TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCc--EEEEecc--CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-
Confidence 57999999999999999999999988 8888887 22111100 0000123345666667778888999999
Q ss_pred eEEEEecccc--ccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCC-----cEEEecCHHHHHhhcccCCCCCcEEEEC
Q psy2951 669 KKIISDSELN--EKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESNVVVIG 741 (1466)
Q Consensus 669 ~~v~~i~~~~--~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~vvVvG 741 (1466)
++|..+ +.+ ...+.+.++.++.||+||+|||+.|+.|+++ |.+ .+. .....+ .....+++++|||
T Consensus 90 ~~v~~i-~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~-g~~~~~~~~~~-~~~~~~-----~~~~~~~~v~vvG 161 (323)
T 3f8d_A 90 DIVEKI-ENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVP-GEQEFAGRGIS-YCSVAD-----APLFKNRVVAVIG 161 (323)
T ss_dssp SCEEEE-EEC--CEEEEESSSCEEEEEEEEECCCCEECCCCCT-TTTTTBTTTEE-SCHHHH-----GGGGTTCEEEEEC
T ss_pred EEEEEE-EecCCEEEEEECCCCEEEcCEEEECcCCCCccCCCC-chhhhcCCceE-EeccCC-----HhHcCCCEEEEEC
Confidence 668888 544 4567777778999999999999999999888 765 222 111111 1233589999999
Q ss_pred CChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCC---C
Q psy2951 742 SSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDN---G 818 (1466)
Q Consensus 742 ~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~---g 818 (1466)
+|++|+|+|..|++.+.+|+++++.+.++. +++ .+.+.+++.||++++++++++++.+ +++..+.+.+ |
T Consensus 162 ~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~~---~~~~~~~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~~~g 233 (323)
T 3f8d_A 162 GGDSALEGAEILSSYSTKVYLIHRRDTFKA---QPI---YVETVKKKPNVEFVLNSVVKEIKGD--KVVKQVVVENLKTG 233 (323)
T ss_dssp CSHHHHHHHHHHHHHSSEEEEECSSSSCCS---CHH---HHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEETTTC
T ss_pred CCHHHHHHHHHHHHhCCeEEEEEeCCCCCc---CHH---HHHHHHhCCCcEEEeCCEEEEEecc--CceeEEEEEECCCC
Confidence 999999999999999999999999987653 222 2333344559999999999999843 4455566654 6
Q ss_pred c--EEecCEEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHH
Q psy2951 819 T--TIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHG 896 (1466)
Q Consensus 819 ~--~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g 896 (1466)
+ ++++|.||+++|++|++++++..+++++++|+|.+|++++|+.|+|||+|||+..+. .+..+..|+.||
T Consensus 234 ~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~--------~~~~~~~A~~~g 305 (323)
T 3f8d_A 234 EIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWL--------GFRQVITAVAQG 305 (323)
T ss_dssp CEEEEECSEEEECCCEECCHHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBSTTT--------TCCCHHHHHHHH
T ss_pred ceEEEEcCEEEEEECCCCChhHHhhcCeeecCCCcEecCCCceecCCCEEEcceecCCCC--------cccceeehhhHH
Confidence 6 799999999999999999999999999999999999999999999999999998631 013568999999
Q ss_pred HHHHHHhcc
Q psy2951 897 RIAALNMVE 905 (1466)
Q Consensus 897 ~~aA~~i~~ 905 (1466)
+.||.+|+.
T Consensus 306 ~~aa~~i~~ 314 (323)
T 3f8d_A 306 AVAATSAYR 314 (323)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999864
No 120
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.97 E-value=1.9e-30 Score=303.88 Aligned_cols=280 Identities=20% Similarity=0.223 Sum_probs=213.1
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCcc---chh--c--ccCcccccccCHhHhhhCCcEEE
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKL---SKQ--L--DIKADSILLRTEEFYKDNDIHVI 666 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~---~~~--~--~~~~~~~~~~~~~~~~~~gv~~~ 666 (1466)
.++||+||||||||+++|..|+++|++ |+++|+.. +++..... ... + .....++..++.+.+++.+++++
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~--v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 83 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLS--TLILEKGM-PGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVE 83 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC--EEEEESSC-TTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCc--EEEEeCCC-CCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 358999999999999999999999987 88888872 22111100 000 0 11233455556667788899999
Q ss_pred EceEEEEecccc---c--cEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCC-----cEEEecCHHHHHhhcccCCCCCc
Q psy2951 667 KGKKIISDSELN---E--KKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESN 736 (1466)
Q Consensus 667 ~~~~v~~i~~~~---~--~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~ 736 (1466)
.++ |..+ +.. . ..+.+.++.++.||+||+|||+.|..|+++ |.+ .+++.. ... .....+++
T Consensus 84 ~~~-v~~i-~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~i~-g~~~~~~~~~~~~~---~~~---~~~~~~~~ 154 (325)
T 2q7v_A 84 MDE-VQGV-QHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKLGIP-GEDNFWGKGVSTCA---TCD---GFFYKGKK 154 (325)
T ss_dssp ECC-EEEE-EECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCCCCT-TTTTTBTTTEESCH---HHH---GGGGTTCE
T ss_pred eee-EEEE-EeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCC-ChhhccCceEEEec---cCC---HHHcCCCE
Confidence 864 8887 443 3 467777888999999999999999988888 764 222221 111 12335899
Q ss_pred EEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHH-hcCcEEEccceEEEEEecCCCceEEEEC
Q psy2951 737 VVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFE-SKGVKFVMKANVSSFEKNEKNDVTAANL 815 (1466)
Q Consensus 737 vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~-~~gv~~~~~~~v~~i~~~~~~~~~~v~~ 815 (1466)
|+|||+|.+|+|+|..|++.+.+|+++++.+.+. .++. +.+.+. +.||+++++++++++.. ++++..+.+
T Consensus 155 v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~----~~~~l~~~~gv~i~~~~~v~~i~~--~~~v~~v~~ 225 (325)
T 2q7v_A 155 VVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR---ANKV----AQARAFANPKMKFIWDTAVEEIQG--ADSVSGVKL 225 (325)
T ss_dssp EEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC---SCHH----HHHHHHTCTTEEEECSEEEEEEEE--SSSEEEEEE
T ss_pred EEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC---cchH----HHHHHHhcCCceEecCCceEEEcc--CCcEEEEEE
Confidence 9999999999999999999999999999987643 2232 333444 46999999999999984 344445555
Q ss_pred C---CCc--EEecCEEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHH
Q psy2951 816 D---NGT--TIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQ 890 (1466)
Q Consensus 816 ~---~g~--~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~ 890 (1466)
. +|+ ++++|.||+|+|++|++++++.. ++++++|+|.||++++|+.|+|||+|||+..+. ..+.
T Consensus 226 ~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~----------~~~~ 294 (325)
T 2q7v_A 226 RNLKTGEVSELATDGVFIFIGHVPNTAFVKDT-VSLRDDGYVDVRDEIYTNIPMLFAAGDVSDYIY----------RQLA 294 (325)
T ss_dssp EETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCBTTTBCSSTTEEECSTTTCSSC----------CCHH
T ss_pred EECCCCcEEEEEcCEEEEccCCCCChHHHhhh-cccCCCccEecCCCCccCCCCEEEeecccCccH----------HHHH
Confidence 4 565 79999999999999999998877 888889999999999999999999999987631 2467
Q ss_pred HHHHHHHHHHHHhcc
Q psy2951 891 LAQYHGRIAALNMVE 905 (1466)
Q Consensus 891 ~A~~~g~~aA~~i~~ 905 (1466)
.|+.||+.||.+|..
T Consensus 295 ~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 295 TSVGAGTRAAMMTER 309 (325)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999975
No 121
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.97 E-value=1.9e-30 Score=301.96 Aligned_cols=280 Identities=17% Similarity=0.211 Sum_probs=213.0
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCC-CccEEEEcCCCCCCCCCCc---cch--hc--ccCcccccccCHhHhhhCCcEEEE
Q psy2951 596 DTFIVVGGGPSGATCVETLRQNGF-TGKLYFITDENFLPYDRVK---LSK--QL--DIKADSILLRTEEFYKDNDIHVIK 667 (1466)
Q Consensus 596 ~~vvVIGgG~AGl~aA~~l~~~g~-~~~v~~~~~~~~~~~~~~~---~~~--~~--~~~~~~~~~~~~~~~~~~gv~~~~ 667 (1466)
+||+||||||||+++|..|++.|+ + |+++|++.. +..... ... .+ .....++..++.+.+.+.+++++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~--v~lie~~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~ 78 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKN--AVLFEKGMP-GGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM 78 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSS--EEEECSSST-TCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCc--EEEEcCCCC-CcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE
Confidence 689999999999999999999998 6 888888532 111100 000 00 123344555566677788999988
Q ss_pred ceEEEEecccccc--EEEccCCCEEecCEEEEcCCCCCCcCCCCCCCC-----cEEEecCHHHHHhhcccCCCCCcEEEE
Q psy2951 668 GKKIISDSELNEK--KIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESNVVVI 740 (1466)
Q Consensus 668 ~~~v~~i~~~~~~--~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~vvVv 740 (1466)
++|..+ +.... .+.+.++.++.||+||+|||+.|+.|+++ |.+ .+++....+ .....+++|+||
T Consensus 79 -~~v~~i-~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~~~-g~~~~~~~~~~~~~~~~------~~~~~~~~v~Vv 149 (311)
T 2q0l_A 79 -TAVQRV-SKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIK-GESEYWGKGVSTCATCD------GFFYKNKEVAVL 149 (311)
T ss_dssp -SCEEEE-EEETTEEEEEETTSCEEEEEEEEECCCEEECCCCCB-THHHHBTTTEESCHHHH------GGGGTTSEEEEE
T ss_pred -EEEEEE-EEcCCEEEEEEcCCCEEECCEEEECCCCCCCCCCCC-ChhhccCCcEEEeecCC------hhhcCCCEEEEE
Confidence 458887 54443 67677788999999999999999999888 754 233222211 123358999999
Q ss_pred CCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHH-hcCcEEEccceEEEEEecCCCceEEEECC---
Q psy2951 741 GSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFE-SKGVKFVMKANVSSFEKNEKNDVTAANLD--- 816 (1466)
Q Consensus 741 G~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~-~~gv~~~~~~~v~~i~~~~~~~~~~v~~~--- 816 (1466)
|+|++|+|+|..|++.|.+|+++++.+.+. .++. +.+.+. +.||+++++++++++... ++++..+.+.
T Consensus 150 G~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~----~~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~~ 221 (311)
T 2q0l_A 150 GGGDTAVEEAIYLANICKKVYLIHRRDGFR---CAPI----TLEHAKNNDKIEFLTPYVVEEIKGD-ASGVSSLSIKNTA 221 (311)
T ss_dssp CCSHHHHHHHHHHHTTSSEEEEECSSSSCC---SCHH----HHHHHHTCTTEEEETTEEEEEEEEE-TTEEEEEEEEETT
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeeCCccC---CCHH----HHHHHhhCCCeEEEeCCEEEEEECC-CCcEeEEEEEecC
Confidence 999999999999999999999999987653 2333 344454 479999999999999843 2344445554
Q ss_pred CCc--EEecCEEEEccccccCccccccCC----ceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHH
Q psy2951 817 NGT--TIPADLVIVGIGTVLNTNYLDGKG----VELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQ 890 (1466)
Q Consensus 817 ~g~--~i~~D~vi~a~G~~p~~~~~~~~g----l~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~ 890 (1466)
+|+ ++++|.||+|+|++|++++++..+ ++++++|+|.+|++++|+.|+|||+|||+..+. ..+.
T Consensus 222 ~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~----------~~~~ 291 (311)
T 2q0l_A 222 TNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKTNVQGLFAAGDIRIFAP----------KQVV 291 (311)
T ss_dssp TCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCC----------CCHH
T ss_pred CCceEEEecCEEEEEecCccChhhhhcccccceeEeccCCCEEeCCccccCCCCeEEcccccCcch----------HHHH
Confidence 565 789999999999999999988875 888889999999999999999999999997531 2467
Q ss_pred HHHHHHHHHHHHhcc
Q psy2951 891 LAQYHGRIAALNMVE 905 (1466)
Q Consensus 891 ~A~~~g~~aA~~i~~ 905 (1466)
.|+.||+.||.+|..
T Consensus 292 ~A~~~g~~aa~~i~~ 306 (311)
T 2q0l_A 292 CAASDGATAALSVIS 306 (311)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHH
Confidence 999999999999864
No 122
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.97 E-value=1.4e-30 Score=302.96 Aligned_cols=292 Identities=19% Similarity=0.187 Sum_probs=201.0
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCc---cchhcccCcccccccChhhhhcCCeEEEeCce
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK---LSKQLDIKADSILLRTEEFYKDNDIHVIKGKK 118 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 118 (1466)
..|||+||||||||++||.+|+++|+++.|++.+........... +.........++.......+.+.+..+..+..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDI 84 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceee
Confidence 469999999999999999999999999888763221000000000 00000112233444445556666777766655
Q ss_pred EEEeccccccEEEecCCcEEecCEEEEccCCCCCCCCCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHH
Q psy2951 119 IISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAA 198 (1466)
Q Consensus 119 v~~~~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A 198 (1466)
.... ..........++.++.||+||||||++|+.++ +|+.+... .+.+.....++....++|+++|||||++|+|+|
T Consensus 85 ~~~~-~~~~~~~~~~~~~~~~~d~liiAtGs~~~~~~-ipG~~~~~-~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A 161 (312)
T 4gcm_A 85 KSVE-DKGEYKVINFGNKELTAKAVIIATGAEYKKIG-VPGEQELG-GRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEG 161 (312)
T ss_dssp CEEE-ECSSCEEEECSSCEEEEEEEEECCCEEECCCC-CTTTTTTB-TTTEESCHHHHGGGGTTCEEEEECCSHHHHHHH
T ss_pred eeee-eeecceeeccCCeEEEeceeEEcccCccCcCC-CCChhhhC-CccEEeeeccCccccCCCEEEEECCCHHHHHHH
Confidence 4432 33445566677889999999999999998654 55543210 011111112223334678999999999999999
Q ss_pred HHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCC--CeEEEE--cCCCcEEeccEE
Q psy2951 199 AFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKN--DVTAAN--LDNGTTIPADLV 274 (1466)
Q Consensus 199 ~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--~~~~v~--~~~g~~i~~D~V 274 (1466)
..|+++|.+||++++.+.+++.. ....+.+++.++.......+..+...+.. ...... ..++..+++|.|
T Consensus 162 ~~l~~~g~~Vtlv~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 235 (312)
T 4gcm_A 162 TFLTKFADKVTIVHRRDELRAQR------ILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGV 235 (312)
T ss_dssp HHHTTTCSEEEEECSSSSCCSCH------HHHHHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEE
T ss_pred HHHHhcCCEEEEEecccccCcch------hHHHHHHHhcCcceeeecceeeeeccccccccceeeeecCCceeEEeeeeE
Confidence 99999999999999987665321 12235567788888888777766543211 111122 233457999999
Q ss_pred EEeeccccCccccccCCceecCCccEEECCCCCcCCCCEEEecccccccCccCCCCcceeccHHHHHHHHHHHHHHhcC
Q psy2951 275 IVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVE 353 (1466)
Q Consensus 275 i~a~G~~p~~~~l~~~gl~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~ 353 (1466)
++++|..|+..+++..++. +++|+|.||+++|||+|+|||+|||++.+ +.++..|+.||+.||.||..
T Consensus 236 ~~~~g~~~~~~~~~~~g~~-~~~G~I~vd~~~~Ts~pgIyA~GDv~~~~----------~~~~~~A~~~G~~AA~~i~~ 303 (312)
T 4gcm_A 236 FIYIGMKPLTAPFKDLGIT-NDVGYIVTKDDMTTSVPGIFAAGDVRDKG----------LRQIVTATGDGSIAAQSAAE 303 (312)
T ss_dssp EECSCEEESCGGGGGGTCB-CTTSCBCCCTTSBCSSTTEEECSTTBSCS----------CCSHHHHHHHHHHHHHHHHH
T ss_pred EeecCCCcCchhHHhccee-cCCCeEeeCCCCccCCCCEEEEeecCCCc----------chHHHHHHHHHHHHHHHHHH
Confidence 9999999999998888775 56789999999999999999999998643 23567899999999999863
No 123
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.97 E-value=2.6e-30 Score=300.86 Aligned_cols=280 Identities=17% Similarity=0.213 Sum_probs=213.9
Q ss_pred CcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCC--------CCCCCchhhccCcccccccChhhhccCCcEEEc
Q psy2951 1067 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY--------DRVKLSKQLDIKADSILLRTEEFYKDNDIHVIK 1138 (1466)
Q Consensus 1067 ~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 1138 (1466)
++|+|||||+||+++|..|++.|++ +|+|||++..-+. ..+.++.. .....+.....+++.+.+++++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~-~v~lie~~~~gg~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~v~~~~ 78 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVK-NAVLFEKGMPGGQITGSSEIENYPGVKEV--VSGLDFMQPWQEQCFRFGLKHEM 78 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCS-SEEEECSSSTTCGGGGCSCBCCSTTCCSC--BCHHHHHHHHHHHHHTTSCEEEC
T ss_pred ceEEEECccHHHHHHHHHHHHCCCC-cEEEEcCCCCCcccccccccccCCCCccc--CCHHHHHHHHHHHHHHcCCEEEE
Confidence 5899999999999999999998864 8999998632110 00111100 11112222223455667999988
Q ss_pred CCeEEEeecCCCC--eEEecCCcEEecCeEEEecCCCCCcCCCCCCCC-----cEEEecCHHHHHhhhcccCCCCeEEEE
Q psy2951 1139 GKKIISDSELNEK--KIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESNVVVI 1211 (1466)
Q Consensus 1139 ~~~v~~i~d~~~~--~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~-----~v~~~~~~~~~~~l~~~~~~~~~vvVv 1211 (1466)
.+|..+ +...+ .|.+.++.++.||+||+|||+.|+.|+++ |.+ +++++++.++ ....+++|+||
T Consensus 79 -~~v~~i-~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~~~-g~~~~~~~~~~~~~~~~~------~~~~~~~v~Vv 149 (311)
T 2q0l_A 79 -TAVQRV-SKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIK-GESEYWGKGVSTCATCDG------FFYKNKEVAVL 149 (311)
T ss_dssp -SCEEEE-EEETTEEEEEETTSCEEEEEEEEECCCEEECCCCCB-THHHHBTTTEESCHHHHG------GGGTTSEEEEE
T ss_pred -EEEEEE-EEcCCEEEEEEcCCCEEECCEEEECCCCCCCCCCCC-ChhhccCCcEEEeecCCh------hhcCCCEEEEE
Confidence 569999 87666 67778888999999999999999998888 753 4555443322 23347999999
Q ss_pred cCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHH-hCCcEEEcCceEEEEEecCCCcEEEEEcC---
Q psy2951 1212 GSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFE-SKGVKFVMKANVSSFEKNEKNDVTAANLD--- 1287 (1466)
Q Consensus 1212 G~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~-~~gv~~~~~~~v~~i~~~~~g~~~~v~l~--- 1287 (1466)
|+|.+|+|+|..|++.|.+|+++++.+.+. ..+. +.+.+. +.||+++++++++++. .+++++..|.+.
T Consensus 150 G~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~----~~~~l~~~~gv~v~~~~~v~~i~-~~~~~v~~v~~~~~~ 221 (311)
T 2q0l_A 150 GGGDTAVEEAIYLANICKKVYLIHRRDGFR---CAPI----TLEHAKNNDKIEFLTPYVVEEIK-GDASGVSSLSIKNTA 221 (311)
T ss_dssp CCSHHHHHHHHHHHTTSSEEEEECSSSSCC---SCHH----HHHHHHTCTTEEEETTEEEEEEE-EETTEEEEEEEEETT
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeeCCccC---CCHH----HHHHHhhCCCeEEEeCCEEEEEE-CCCCcEeEEEEEecC
Confidence 999999999999999999999999987653 2333 333344 5799999999999998 343455556665
Q ss_pred CCC--eeecCEEEEeeccccCccccccCC----ceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHH
Q psy2951 1288 NGT--TIPADLVIVGIGTVLNTNYLDGKG----VELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQ 1361 (1466)
Q Consensus 1288 ~g~--~i~~D~vv~a~G~~p~~~~~~~~g----l~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~ 1361 (1466)
+|+ ++++|.||+++|..|++++++..| +.++.+|+|.||++++|+.|+|||+|||+..+. ..+.
T Consensus 222 ~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~----------~~~~ 291 (311)
T 2q0l_A 222 TNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKTNVQGLFAAGDIRIFAP----------KQVV 291 (311)
T ss_dssp TCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCC----------CCHH
T ss_pred CCceEEEecCEEEEEecCccChhhhhcccccceeEeccCCCEEeCCccccCCCCeEEcccccCcch----------HHHH
Confidence 675 789999999999999999998875 888888999999999999999999999998632 1358
Q ss_pred HHHHHHHHHHHHhcC
Q psy2951 1362 LAQYHGRIAALNMVE 1376 (1466)
Q Consensus 1362 ~A~~qa~~aa~~i~g 1376 (1466)
.|..||+.||.||+.
T Consensus 292 ~A~~~g~~aa~~i~~ 306 (311)
T 2q0l_A 292 CAASDGATAALSVIS 306 (311)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHH
Confidence 999999999999864
No 124
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.97 E-value=2.3e-30 Score=299.45 Aligned_cols=273 Identities=16% Similarity=0.209 Sum_probs=212.4
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc----cCcccccccChhhhccC-CcEEEcCC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD----IKADSILLRTEEFYKDN-DIHVIKGK 1140 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~-~v~~~~~~ 1140 (1466)
+++|+|||||+||+++|..|++.|+ +|+|||+++...... .....+. .....+.....+.+.+. +++++.+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~--~v~lie~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~- 77 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARK--NILLVDAGERRNRFA-SHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEG- 77 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC--CEEEEECCCCGGGGC-SCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEES-
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC--CEEEEeCCCcccccc-hhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEe-
Confidence 3689999999999999999999998 999999875321110 0111110 11222222233445555 7888766
Q ss_pred eEEEeecCCC--CeEEecCCcEEecCeEEEecCCCCCcCCCCCCCC-----cEEEecCHHHHHhhhcccCCCCeEEEEcC
Q psy2951 1141 KIISDSELNE--KKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESNVVVIGS 1213 (1466)
Q Consensus 1141 ~v~~i~d~~~--~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~-----~v~~~~~~~~~~~l~~~~~~~~~vvVvG~ 1213 (1466)
+|+.+ +... ..|.++++.++.||+||+|||+.|+.|++| |.+ ++++.. ..+... ..+++++|||+
T Consensus 78 ~v~~i-~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~~~-g~~~~~~~~~~~~~-~~~~~~-----~~~~~v~vvG~ 149 (297)
T 3fbs_A 78 RVTDA-KGSFGEFIVEIDGGRRETAGRLILAMGVTDELPEIA-GLRERWGSAVFHCP-YCHGYE-----LDQGKIGVIAA 149 (297)
T ss_dssp CEEEE-EEETTEEEEEETTSCEEEEEEEEECCCCEEECCCCB-TTGGGBTTTEESCH-HHHTGG-----GTTCEEEEECC
T ss_pred EEEEE-EEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCCCC-CchhhcCCeeEEcc-cCcchh-----hcCCEEEEEec
Confidence 59999 7664 478888898999999999999999998888 865 344332 222211 23899999999
Q ss_pred CHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeee
Q psy2951 1214 SFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIP 1293 (1466)
Q Consensus 1214 g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~ 1293 (1466)
|.+|+|+|..|++.| +|+++.+.+..+ .+.+.+.+++.||+++. +++++++ .+ + .|.+.+|++++
T Consensus 150 G~~~~e~a~~l~~~g-~v~~v~~~~~~~--------~~~~~~~l~~~gv~i~~-~~v~~i~-~~-~---~v~~~~g~~~~ 214 (297)
T 3fbs_A 150 SPMAIHHALMLPDWG-ETTFFTNGIVEP--------DADQHALLAARGVRVET-TRIREIA-GH-A---DVVLADGRSIA 214 (297)
T ss_dssp STTHHHHHHHGGGTS-EEEEECTTTCCC--------CHHHHHHHHHTTCEEEC-SCEEEEE-TT-E---EEEETTSCEEE
T ss_pred CccHHHHHHHhhhcC-cEEEEECCCCCC--------CHHHHHHHHHCCcEEEc-ceeeeee-cC-C---eEEeCCCCEEE
Confidence 999999999999999 999999887522 23466788899999996 8999998 32 2 58899999999
Q ss_pred cCEEEEeeccccCccccccCCceee--CCC-eEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHH
Q psy2951 1294 ADLVIVGIGTVLNTNYLDGKGVELN--GQK-AVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIA 1370 (1466)
Q Consensus 1294 ~D~vv~a~G~~p~~~~~~~~gl~~~--~~G-~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~a 1370 (1466)
+|.||+++|..|++++++..|+..+ .+| ++.||++++|+.|+|||+|||+..|.. +..|..||+.|
T Consensus 215 ~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i~vd~~~~t~~~~vya~GD~~~~~~~-----------~~~A~~~g~~a 283 (297)
T 3fbs_A 215 LAGLFTQPKLRITVDWIEKLGCAVEEGPMGSTIVTDPMKQTTARGIFACGDVARPAGS-----------VALAVGDGAMA 283 (297)
T ss_dssp ESEEEECCEEECCCSCHHHHTCCEEEETTEEEECCCTTCBCSSTTEEECSGGGCTTCC-----------HHHHHHHHHHH
T ss_pred EEEEEEccCcccCchhHHhcCCccccCCCCceEEeCCCCccCCCCEEEEeecCCchHH-----------HHHHHHhHHHH
Confidence 9999999999999999999898887 357 899999999999999999999987554 38999999999
Q ss_pred HHHhcC
Q psy2951 1371 ALNMVE 1376 (1466)
Q Consensus 1371 a~~i~g 1376 (1466)
|.+|+.
T Consensus 284 a~~i~~ 289 (297)
T 3fbs_A 284 GAAAHR 289 (297)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999863
No 125
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.97 E-value=2.5e-30 Score=301.95 Aligned_cols=281 Identities=20% Similarity=0.266 Sum_probs=212.9
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCc------cchhcccCcccccccCHhHhhhCCcEEEE
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK------LSKQLDIKADSILLRTEEFYKDNDIHVIK 667 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 667 (1466)
..+||+||||||||+++|+.|+++|++ |+++|+.. .++.... ..........++..++.+.+++.+++++.
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~--v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 91 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFS--VAILDKAV-AGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG 91 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC--EEEEESSS-TTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCc--EEEEeCCC-CCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE
Confidence 357999999999999999999999987 88888743 2211100 00000112234445555667778999988
Q ss_pred ceEEEEecccccc--EEEccCCCEEecCEEEEcCCCCCCcCCCCCCCC-----cEEEecCHHHHHhhcccCCCCCcEEEE
Q psy2951 668 GKKIISDSELNEK--KIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESNVVVI 740 (1466)
Q Consensus 668 ~~~v~~i~~~~~~--~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~vvVv 740 (1466)
+ +|..+ +.... .+.+ ++.++.||+||+|||+.|+.|+++ |.+ .+++....+ .....+++++||
T Consensus 92 ~-~v~~i-~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~~~i~-g~~~~~~~~~~~~~~~~------~~~~~~~~v~vi 161 (319)
T 3cty_A 92 V-EVRSI-KKTQGGFDIET-NDDTYHAKYVIITTGTTHKHLGVK-GESEYFGKGTSYCSTCD------GYLFKGKRVVTI 161 (319)
T ss_dssp C-CEEEE-EEETTEEEEEE-SSSEEEEEEEEECCCEEECCCCCB-TTTTTBTTTEESCHHHH------GGGGBTSEEEEE
T ss_pred e-eEEEE-EEeCCEEEEEE-CCCEEEeCEEEECCCCCcccCCCC-ChHHhCCceEEEEEecc------hhhcCCCeEEEE
Confidence 4 48887 54333 4555 567899999999999999988888 754 232222111 122347999999
Q ss_pred CCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECC---C
Q psy2951 741 GSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLD---N 817 (1466)
Q Consensus 741 G~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~---~ 817 (1466)
|+|++|+|+|..|++.+.+|+++++.+.+.. ++ .+.+.+.+.||+++++++++++..+ ++++..+.+. +
T Consensus 162 G~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~---~~----~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~ 233 (319)
T 3cty_A 162 GGGNSGAIAAISMSEYVKNVTIIEYMPKYMC---EN----AYVQEIKKRNIPYIMNAQVTEIVGD-GKKVTGVKYKDRTT 233 (319)
T ss_dssp CCSHHHHHHHHHHTTTBSEEEEECSSSSCCS---CH----HHHHHHHHTTCCEECSEEEEEEEES-SSSEEEEEEEETTT
T ss_pred CCCHHHHHHHHHHHhhCCcEEEEEcCCccCC---CH----HHHHHHhcCCcEEEcCCeEEEEecC-CceEEEEEEEEcCC
Confidence 9999999999999999999999999876531 22 3455667899999999999999843 3445455553 5
Q ss_pred Cc--EEecCEEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHH
Q psy2951 818 GT--TIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYH 895 (1466)
Q Consensus 818 g~--~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~ 895 (1466)
|+ ++++|.||+|+|++|++++++..|++++++|+|.||++++|+.|+|||+|||+..+. ..+..|+.|
T Consensus 234 g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~----------~~~~~A~~~ 303 (319)
T 3cty_A 234 GEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQRTSVPGVYAAGDVTSGNF----------AQIASAVGD 303 (319)
T ss_dssp CCEEEECCSEEEECCCEEECCGGGTTSCCCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCC----------CCHHHHHHH
T ss_pred CceEEEecCEEEEeeCCccChHHHhhccccccCCccEeCCCCCccCCCCEEEeecccCcch----------hhHHHHHHH
Confidence 65 699999999999999999999889999999999999999999999999999997642 245789999
Q ss_pred HHHHHHHhcc
Q psy2951 896 GRIAALNMVE 905 (1466)
Q Consensus 896 g~~aA~~i~~ 905 (1466)
|+.||.+|..
T Consensus 304 g~~aa~~i~~ 313 (319)
T 3cty_A 304 GCKAALSLYS 313 (319)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999964
No 126
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.97 E-value=4.2e-30 Score=300.10 Aligned_cols=280 Identities=20% Similarity=0.279 Sum_probs=214.1
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCC---CCchh--hc-cCcccccccChhhhccCCcEEEcC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRV---KLSKQ--LD-IKADSILLRTEEFYKDNDIHVIKG 1139 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~---~l~~~--~~-~~~~~~~~~~~~~~~~~~v~~~~~ 1139 (1466)
.++|+|||||+||+++|..|++.|+ +|+|||+.. .+.... .+... +. .....+.....+.+++.+++++.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~--~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~- 91 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGF--SVAILDKAV-AGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG- 91 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC--CEEEEESSS-TTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCC--cEEEEeCCC-CCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-
Confidence 4689999999999999999999998 999999853 211000 00000 00 01111212223455667999988
Q ss_pred CeEEEeecCCCC--eEEecCCcEEecCeEEEecCCCCCcCCCCCCCC-----cEEEecCHHHHHhhhcccCCCCeEEEEc
Q psy2951 1140 KKIISDSELNEK--KIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESNVVVIG 1212 (1466)
Q Consensus 1140 ~~v~~i~d~~~~--~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~-----~v~~~~~~~~~~~l~~~~~~~~~vvVvG 1212 (1466)
.+|..+ +...+ .|.+ ++.++.||+||+|||+.|+.++++ |.+ ++++..+.++ ....+++++|||
T Consensus 92 ~~v~~i-~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~~~i~-g~~~~~~~~~~~~~~~~~------~~~~~~~v~viG 162 (319)
T 3cty_A 92 VEVRSI-KKTQGGFDIET-NDDTYHAKYVIITTGTTHKHLGVK-GESEYFGKGTSYCSTCDG------YLFKGKRVVTIG 162 (319)
T ss_dssp CCEEEE-EEETTEEEEEE-SSSEEEEEEEEECCCEEECCCCCB-TTTTTBTTTEESCHHHHG------GGGBTSEEEEEC
T ss_pred eeEEEE-EEeCCEEEEEE-CCCEEEeCEEEECCCCCcccCCCC-ChHHhCCceEEEEEecch------hhcCCCeEEEEC
Confidence 569999 86555 4655 667899999999999999998888 764 4554432222 123479999999
Q ss_pred CCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcC---CC
Q psy2951 1213 SSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLD---NG 1289 (1466)
Q Consensus 1213 ~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~---~g 1289 (1466)
+|.+|+|+|..|++.+.+|+++++.+.+.. .+ .+.+.+++.||+++++++++++. .+++++..|.+. +|
T Consensus 163 ~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~---~~----~l~~~l~~~gv~i~~~~~v~~i~-~~~~~v~~v~~~~~~~g 234 (319)
T 3cty_A 163 GGNSGAIAAISMSEYVKNVTIIEYMPKYMC---EN----AYVQEIKKRNIPYIMNAQVTEIV-GDGKKVTGVKYKDRTTG 234 (319)
T ss_dssp CSHHHHHHHHHHTTTBSEEEEECSSSSCCS---CH----HHHHHHHHTTCCEECSEEEEEEE-ESSSSEEEEEEEETTTC
T ss_pred CCHHHHHHHHHHHhhCCcEEEEEcCCccCC---CH----HHHHHHhcCCcEEEcCCeEEEEe-cCCceEEEEEEEEcCCC
Confidence 999999999999999999999999875432 22 34556668999999999999998 444556667664 67
Q ss_pred C--eeecCEEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHH
Q psy2951 1290 T--TIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHG 1367 (1466)
Q Consensus 1290 ~--~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa 1367 (1466)
+ ++++|.||+|+|..|++++++..|+.++++|+|.||++++|+.|+|||+|||+..+.. .+..|..||
T Consensus 235 ~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~----------~~~~A~~~g 304 (319)
T 3cty_A 235 EEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQRTSVPGVYAAGDVTSGNFA----------QIASAVGDG 304 (319)
T ss_dssp CEEEECCSEEEECCCEEECCGGGTTSCCCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCCC----------CHHHHHHHH
T ss_pred ceEEEecCEEEEeeCCccChHHHhhccccccCCccEeCCCCCccCCCCEEEeecccCcchh----------hHHHHHHHH
Confidence 5 6899999999999999999999999998889999999999999999999999986421 358899999
Q ss_pred HHHHHHhcC
Q psy2951 1368 RIAALNMVE 1376 (1466)
Q Consensus 1368 ~~aa~~i~g 1376 (1466)
+.||.||+.
T Consensus 305 ~~aa~~i~~ 313 (319)
T 3cty_A 305 CKAALSLYS 313 (319)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999874
No 127
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.97 E-value=1.7e-30 Score=305.93 Aligned_cols=283 Identities=17% Similarity=0.181 Sum_probs=218.4
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCC------c---cchhcccCcccccccCHhHhhhCCcEE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRV------K---LSKQLDIKADSILLRTEEFYKDNDIHV 665 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~~~~~~~~~~~gv~~ 665 (1466)
.++|+|||||+||+++|+.|++.|++ |+++|+++.+++... . ..........++..++.+.+.+.++++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~--v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQAS--VKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTI 84 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC--EEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEE
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCC--EEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcE
Confidence 47999999999999999999999987 899999875442210 0 000011234556666777788889999
Q ss_pred EEceEEEEecccccc---EEEccCCCEEecCEEEEcCCC---CCCcCCCCCCCCc----EEEecCHHHHHhhcccCCCCC
Q psy2951 666 IKGKKIISDSELNEK---KIKLQDGTSIDFTKIYLATGS---SPRTISQADGVNK----VFYLRTVEDANNIAPHITPES 735 (1466)
Q Consensus 666 ~~~~~v~~i~~~~~~---~v~~~~~~~~~~d~lviAtG~---~~~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~ 735 (1466)
+++++|..+ +.... .+.+.+++ +.||+||+|||+ .|+.|+++ |.+. .... ...+... .+++
T Consensus 85 ~~~~~v~~i-~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~~~~-g~~~~~g~~~~~-~~~~~~~-----~~~~ 155 (332)
T 3lzw_A 85 CLEQAVESV-EKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPRKLELE-NAEQYEGKNLHY-FVDDLQK-----FAGR 155 (332)
T ss_dssp ECSCCEEEE-EECTTSCEEEEESSEE-EEEEEEEECCTTSCCEECCCCCT-TGGGGBTTTEES-SCSCGGG-----GBTC
T ss_pred EccCEEEEE-EECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCCCCCCC-ChhhccCceEEE-ecCCHHH-----cCCC
Confidence 999989998 55543 77776665 999999999999 88888888 7652 1211 2222211 1389
Q ss_pred cEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEEC
Q psy2951 736 NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANL 815 (1466)
Q Consensus 736 ~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~ 815 (1466)
+++|||+|.+|+|+|..|++.+.+|+++++.+.+.. .+. ..+.+++.||++++++++.+++..++ ...+.+
T Consensus 156 ~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~--~~~-----~~~~l~~~gv~~~~~~~v~~i~~~~~--~~~v~~ 226 (332)
T 3lzw_A 156 RVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA--HEH-----SVENLHASKVNVLTPFVPAELIGEDK--IEQLVL 226 (332)
T ss_dssp EEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS--CHH-----HHHHHHHSSCEEETTEEEEEEECSSS--CCEEEE
T ss_pred EEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc--cHH-----HHHHHhcCCeEEEeCceeeEEecCCc--eEEEEE
Confidence 999999999999999999999999999999886532 111 23457889999999999999984322 334555
Q ss_pred CC-----CcEEecCEEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHH
Q psy2951 816 DN-----GTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQ 890 (1466)
Q Consensus 816 ~~-----g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~ 890 (1466)
.+ ++++++|.||+|+|++|++++++.++++. ++|+|.+|++++|+.|+|||+|||+..+.. +..+.
T Consensus 227 ~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~--------~~~~~ 297 (332)
T 3lzw_A 227 EEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDI-EKNSIVVKSTMETNIEGFFAAGDICTYEGK--------VNLIA 297 (332)
T ss_dssp EETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCE-ETTEEECCTTSBCSSTTEEECGGGEECTTC--------CCCHH
T ss_pred EecCCCceEEEECCEEEEeeccCCCchHHhhcCccc-cCCeEEeCCCCceecCCEEEccceecCCCC--------cceEe
Confidence 44 45799999999999999999999999988 678999999999999999999999975432 23668
Q ss_pred HHHHHHHHHHHHhccC
Q psy2951 891 LAQYHGRIAALNMVEK 906 (1466)
Q Consensus 891 ~A~~~g~~aA~~i~~~ 906 (1466)
.|..||+.||.+|+..
T Consensus 298 ~A~~~g~~aa~~i~~~ 313 (332)
T 3lzw_A 298 SGFGEAPTAVNNAKAY 313 (332)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred eehhhHHHHHHHHHHh
Confidence 9999999999999753
No 128
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.97 E-value=1.9e-31 Score=353.87 Aligned_cols=308 Identities=19% Similarity=0.300 Sum_probs=229.6
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCC----CCCCchhhccCcccccccChhhhccCCcEEEcCC
Q psy2951 1065 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD----RVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGK 1140 (1466)
Q Consensus 1065 ~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 1140 (1466)
..++|+|||||+||++||..|++.|+. +|+|||+++.+++. .|... ....+.....+++++.||+++.++
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~-~Vtv~E~~~~~GG~~~~~ip~~~-----~~~~~~~~~~~~~~~~gv~~~~~~ 259 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYS-DITIFEKQEYVGGLSTSEIPQFR-----LPYDVVNFEIELMKDLGVKIICGK 259 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCC-CEEEEESSSSCSTHHHHTSCTTT-----SCHHHHHHHHHHHHTTTCEEEESC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCC-cEEEEeCCCCCCccccccCCccc-----CCHHHHHHHHHHHHHCCcEEEccc
Confidence 357899999999999999999999984 69999998765432 11100 011111222356778899999998
Q ss_pred eEEEeecCCCCeEEecCCcEEecCeEEEecCC-CCCcCCCCCCCC---cEEEecCHH----HHHh-----hhccc-CCCC
Q psy2951 1141 KIISDSELNEKKIKLQDGTSIDFTKIYLATGS-SPRTISQADGVN---KVFYLRTVE----DANN-----IAPHI-TPES 1206 (1466)
Q Consensus 1141 ~v~~i~d~~~~~v~~~~g~~~~yd~lvlAtG~-~~~~~~~~~g~~---~v~~~~~~~----~~~~-----l~~~~-~~~~ 1206 (1466)
.+. .+.++++++..+.||+||||||+ .|+.+++++|++ ++++..++. ++.+ ++..+ ..++
T Consensus 260 ~v~------~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~ 333 (1025)
T 1gte_A 260 SLS------ENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRG 333 (1025)
T ss_dssp CBS------TTSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCS
T ss_pred Eec------cceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHHHHHHHhhcccccccccccccccCC
Confidence 431 13466666666889999999999 588776532553 677643222 1111 11111 2367
Q ss_pred eEEEEcCCHHHHHHHHHHhcCCC-eEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEE
Q psy2951 1207 NVVVIGSSFIGMEAAAFCASKVK-SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAAN 1285 (1466)
Q Consensus 1207 ~vvVvG~g~~g~e~a~~l~~~g~-~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~ 1285 (1466)
+|+|||+|++|+|+|..+++.|. +||++++.++.+.+.+++++ +.+++.||+|+++..+.++. .+++++..|+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~e~-----~~~~~~Gv~~~~~~~~~~i~-~~~g~v~~v~ 407 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPEEV-----ELAKEEKCEFLPFLSPRKVI-VKGGRIVAVQ 407 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHHHH-----HHHHHTTCEEECSEEEEEEE-EETTEEEEEE
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCHHHH-----HHHHHcCCEEEeCCCceEEE-ccCCeEEEEE
Confidence 99999999999999999999996 89999998854433444443 45778999999999999997 4456666665
Q ss_pred cC------CC---------CeeecCEEEEeeccccC-cccccc-CCceeeCCCeEEeCC-CccccCCCEEEecccccCCC
Q psy2951 1286 LD------NG---------TTIPADLVIVGIGTVLN-TNYLDG-KGVELNGQKAVVVNE-YLETNVPGVYAGGDIAYAPL 1347 (1466)
Q Consensus 1286 l~------~g---------~~i~~D~vv~a~G~~p~-~~~~~~-~gl~~~~~G~i~vd~-~~~t~~~~v~a~GD~a~~p~ 1347 (1466)
+. +| .++++|.||+|+|..|+ ..|+.. .|+.++.+|+|.||+ +++|+.|+|||+|||+..|.
T Consensus 408 ~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~~ 487 (1025)
T 1gte_A 408 FVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMAN 487 (1025)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCSCC
T ss_pred EEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccCCCCEEEeCCCCCCch
Confidence 53 33 36899999999999764 567766 589999889999996 89999999999999998765
Q ss_pred ccCCCceeeeecHHHHHHHHHHHHHHhcC-------CC-CCCCCCcccee--ccccccEEEEee
Q psy2951 1348 HSFYNKNASIGHYQLAQYHGRIAALNMVE-------KK-TSLSTIPFFWT--MLFGVGFRFAGY 1401 (1466)
Q Consensus 1348 ~~~~~~~~~~~~~~~A~~qa~~aa~~i~g-------~~-~~~~~~p~~w~--~~~~~~~~~~g~ 1401 (1466)
.. ..|..||+.||.+|.+ .. ..+..+||||+ ++++.++++.|.
T Consensus 488 ~~-----------~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~~~p~~~~ev~~v~ls~~~~G~ 540 (1025)
T 1gte_A 488 TT-----------VESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYTPVDLVDISVEMAGL 540 (1025)
T ss_dssp CH-----------HHHHHHHHHHHHHHHHHHHHHTTCCCCSSCCBCCCCCGGGGCCCCEEETTE
T ss_pred HH-----------HHHHHHHHHHHHHHHHHHHhccCCCcccCcCccccccccccccceeeeccc
Confidence 43 6799999999999984 22 25678999999 799999999886
No 129
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.97 E-value=1.8e-30 Score=313.87 Aligned_cols=287 Identities=18% Similarity=0.239 Sum_probs=232.7
Q ss_pred CCcEEEECCchHHHHHHHHHHh---cCCCCcEEEEcCCCCCCCCCCCCchhhc--cCcccccccChhhhccCCcEEEcCC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQ---NGFTGKLYFITDENFLPYDRVKLSKQLD--IKADSILLRTEEFYKDNDIHVIKGK 1140 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~---~g~~~~i~li~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~ 1140 (1466)
|++|||||||+||+++|..|++ .|. +|+|||+++++.|.. .+..... ...+++.....+++.+.+++++.+
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~--~V~vie~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~- 76 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKA--DVKVINKSRFSYFRP-ALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG- 76 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGS--EEEEEESSSEEEECC-SSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCC--eEEEEeCCCCceecc-chhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-
Confidence 3689999999999999999999 777 999999998765543 2222221 234444455556777889999988
Q ss_pred eEEEeecCCCCeEEecCCcE----EecCeEEEecCCCCCcCCCCCCCC-cEEEecCHHHHHhhhcccCC-CCeEEEEcCC
Q psy2951 1141 KIISDSELNEKKIKLQDGTS----IDFTKIYLATGSSPRTISQADGVN-KVFYLRTVEDANNIAPHITP-ESNVVVIGSS 1214 (1466)
Q Consensus 1141 ~v~~i~d~~~~~v~~~~g~~----~~yd~lvlAtG~~~~~~~~~~g~~-~v~~~~~~~~~~~l~~~~~~-~~~vvVvG~g 1214 (1466)
+|+.+ +++.+.|.+.++.. +.||+||+|||++|+.+++| |++ ..+.+.+.+++.++++.+.. .++++|||+|
T Consensus 77 ~v~~i-~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ip-G~~~~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G 154 (409)
T 3h8l_A 77 TVEKI-DAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVK-GWDKYGYSVCEPEFATKLREKLESFQGGNIAIGSG 154 (409)
T ss_dssp EEEEE-ETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGGSB-THHHHCEESSSTTHHHHHHHHHHHCCSEEEEEEEC
T ss_pred eEEEE-eCCCCEEEEccCCcccceeeCCEEEECCCCCcCccCCC-ChhhcCcCcCCHHHHHHHHHHHHHhcCCeEEEEec
Confidence 69999 99999999988864 99999999999999998898 877 56677788888888776543 2677899999
Q ss_pred H-------------------------HHHHHH----HHHhcCCC----eEEEEcCCCcCCcccccHHHHHHHHHHHHhCC
Q psy2951 1215 F-------------------------IGMEAA----AFCASKVK----SVTVVGRGAVPFQESLGKEVGERITKLFESKG 1261 (1466)
Q Consensus 1215 ~-------------------------~g~e~a----~~l~~~g~----~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~g 1261 (1466)
. +++|+| ..+++.|. +|+++++.+ .++ .+++.+.+.+.+.++++|
T Consensus 155 ~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l~-~~~~~~~~~~~~~l~~~g 232 (409)
T 3h8l_A 155 PFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLS-DLSPNSRKAVASIYNQLG 232 (409)
T ss_dssp CBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SST-TBCHHHHHHHHHHHHHHT
T ss_pred ccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-ccc-ccCHHHHHHHHHHHHHCC
Confidence 2 466766 56667774 899999987 443 677899999999999999
Q ss_pred cEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCccccccC--CceeeCCCeEEeCCCccc-cCCCEEE
Q psy2951 1262 VKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGK--GVELNGQKAVVVNEYLET-NVPGVYA 1338 (1466)
Q Consensus 1262 v~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~~~~~~~--gl~~~~~G~i~vd~~~~t-~~~~v~a 1338 (1466)
|+++++++|++++ . + .|.+.||+++++|+||+++|..|+ ++++.+ ++ .+.+|++.||+++|| ++|||||
T Consensus 233 V~~~~~~~v~~i~-~-~----~v~~~~g~~~~~D~vi~a~G~~~~-~~l~~~~~~l-~~~~G~i~vd~~~~~~~~~~vfa 304 (409)
T 3h8l_A 233 IKLVHNFKIKEIR-E-H----EIVDEKGNTIPADITILLPPYTGN-PALKNSTPDL-VDDGGFIPTDLNMVSIKYDNVYA 304 (409)
T ss_dssp CEEECSCCEEEEC-S-S----EEEETTSCEEECSEEEEECCEECC-HHHHTSCGGG-SCTTSCBCBBTTSBBSSCTTEEE
T ss_pred CEEEcCCceEEEC-C-C----eEEECCCCEEeeeEEEECCCCCcc-HHHHhccccC-cCCCCCEEeCcccccCCCCCEEE
Confidence 9999999999997 3 2 278899999999999999999998 577777 44 356789999999999 7999999
Q ss_pred ecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCC
Q psy2951 1339 GGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEK 1377 (1466)
Q Consensus 1339 ~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~ 1377 (1466)
+|||+..+.+. .+..|..||+.||+||++.
T Consensus 305 ~GD~~~~~~~~---------~~~~A~~q~~~aa~~i~~~ 334 (409)
T 3h8l_A 305 VGDANSMTVPK---------LGYLAVMTGRIAAQHLANR 334 (409)
T ss_dssp CGGGBTTCCSC---------CHHHHHHHHHHHHHHHHHH
T ss_pred eehhccCCCCc---------HHHHHHHHHHHHHHHHHHH
Confidence 99999875443 2378999999999999863
No 130
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.97 E-value=1.5e-30 Score=303.53 Aligned_cols=290 Identities=17% Similarity=0.213 Sum_probs=207.3
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCC-CCCCCCccchhc--------ccCcccccccChhhhhcCCeE
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENF-LPYDRVKLSKQL--------DIKADSILLRTEEFYKDNDIH 112 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~v~ 112 (1466)
+++||+||||||||++||.+|+++|+++.|++...... .++...+....+ .....++..+..+.+++.++.
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~ 82 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTT 82 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcE
Confidence 35899999999999999999999999998875432110 111111111000 112334555666677788888
Q ss_pred EEeCceEEEeccccccEEEecCCcEEecCEEEEccCCCCCCCCCCCCCCcE--EEecCHHHHHhhcccCCCCCcEEEECC
Q psy2951 113 VIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKV--FYLRTVEDANNIAPHITPESNVVVIGS 190 (1466)
Q Consensus 113 ~~~~~~v~~~~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~vvVvGg 190 (1466)
+...+............+.+.++.++.||+||||||++|+.++ +++.+.. ............ ....++++++|||+
T Consensus 83 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~~-ipG~~~~~~~~~~~~~~~~~~-~~~~~~~~vvViGg 160 (314)
T 4a5l_A 83 IITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMH-VPGEDKYWQNGVSACAICDGA-VPIFRNKVLMVVGG 160 (314)
T ss_dssp EECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECCCC-CTTHHHHBTTTEESCHHHHTT-SGGGTTSEEEEECS
T ss_pred EEEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccccccccC-CCccccccccceeeehhhhhh-hhhcCCCeEEEECC
Confidence 8887766655555667777888899999999999999998654 5553211 111122222222 22345789999999
Q ss_pred CHhHHHHHHHHhhCCCEEEEEeecCcccccccCHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCCeEEE-----EcCC
Q psy2951 191 SFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAA-----NLDN 265 (1466)
Q Consensus 191 G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~v-----~~~~ 265 (1466)
|++|+|+|..|+++|.+||+++|.+.... ... ...+.+...+++.+....+.++...+. ....+ .+.+
T Consensus 161 G~ig~e~A~~l~~~G~~Vt~v~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~ 233 (314)
T 4a5l_A 161 GDAAMEEALHLTKYGSKVIILHRRDAFRA---SKT---MQERVLNHPKIEVIWNSELVELEGDGD-LLNGAKIHNLVSGE 233 (314)
T ss_dssp SHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHH---HHHHHHTCTTEEEECSEEEEEEEESSS-SEEEEEEEETTTCC
T ss_pred ChHHHHHHHHHHHhCCeeeeecccccccc---cch---hhhhhhcccceeeEeeeeeEEEEeeee-ccceeEEeeccccc
Confidence 99999999999999999999998765432 222 233455667889998988888876432 22222 2345
Q ss_pred CcEEeccEEEEeeccccCccccccCCceecCCccEEECCCCCcCCCCEEEecccccccCccCCCCcceeccHHHHHHHHH
Q psy2951 266 GTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGR 345 (1466)
Q Consensus 266 g~~i~~D~Vi~a~G~~p~~~~l~~~gl~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~g~~~~~~~~~~A~~~g~ 345 (1466)
++++++|.|++|+|++||++++.. .++++++|++ ||+++|||+|+|||+|||++.+. .++..|+.||+
T Consensus 234 ~~~i~~d~vi~a~G~~pn~~~l~~-~~~~~~~G~i-v~~~~~Ts~pgIyA~GDv~~~~~----------~~~~~A~~~G~ 301 (314)
T 4a5l_A 234 YKVVPVAGLFYAIGHSPNSKFLGG-QVKTADDGYI-LTEGPKTSVDGVFACGDVCDRVY----------RQAIVAAGSGC 301 (314)
T ss_dssp EEEEECSEEEECSCEEESCGGGTT-SSCBCTTSCB-CCBTTBCSSTTEEECSTTTCSSC----------CCHHHHHHHHH
T ss_pred ceeeccccceEecccccChhHhcc-cceEcCCeeE-eCCCCccCCCCEEEEEeccCCcc----------hHHHHHHHHHH
Confidence 678999999999999999998865 4677888876 88899999999999999997652 34667999999
Q ss_pred HHHHHhc
Q psy2951 346 IAALNMV 352 (1466)
Q Consensus 346 ~aa~~i~ 352 (1466)
.||.++.
T Consensus 302 ~AA~~~~ 308 (314)
T 4a5l_A 302 MAALSCE 308 (314)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
No 131
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.97 E-value=6.2e-30 Score=297.53 Aligned_cols=281 Identities=23% Similarity=0.330 Sum_probs=214.5
Q ss_pred CcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCC-CCCCCCCCchhhc---cCcccccccChhhhccCCcEEEcCCeE
Q psy2951 1067 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENF-LPYDRVKLSKQLD---IKADSILLRTEEFYKDNDIHVIKGKKI 1142 (1466)
Q Consensus 1067 ~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~-~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~v 1142 (1466)
.+|+|||||+||+++|..|++.|. +|+|||+... ..+....+..... .....+.....+++++.+++++.+++|
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~--~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v 79 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGI--RTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSA 79 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTC--CEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC--cEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEE
Confidence 579999999999999999999998 9999976421 0000000000000 011122222234566779999999889
Q ss_pred EEeecCC-----CCeEEecCCcEEecCeEEEecCCCCCcCCCCCCCC-----cEEEecCHHHHHhhhcccCCCCeEEEEc
Q psy2951 1143 ISDSELN-----EKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESNVVVIG 1212 (1466)
Q Consensus 1143 ~~i~d~~-----~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~-----~v~~~~~~~~~~~l~~~~~~~~~vvVvG 1212 (1466)
+.+ ++. ...|.+++|.++.||+||+|||+.|+.+++| |.+ +++++. .. ......+++|+|||
T Consensus 80 ~~i-~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~-g~~~~~~~~~~~~~---~~---~~~~~~~~~v~VvG 151 (310)
T 1fl2_A 80 SKL-IPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVP-GEDQYRTKGVTYCP---HC---DGPLFKGKRVAVIG 151 (310)
T ss_dssp EEE-ECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCCCCT-TTTTTBTTTEESCH---HH---HGGGGBTCEEEEEC
T ss_pred EEE-EecccCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCC-ChhhcccceeEEec---cC---cHhhcCCCEEEEEC
Confidence 999 865 3477888888999999999999999888888 764 354432 11 22233589999999
Q ss_pred CCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHh-CCcEEEcCceEEEEEecCCCcEEEEEcCC---
Q psy2951 1213 SSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFES-KGVKFVMKANVSSFEKNEKNDVTAANLDN--- 1288 (1466)
Q Consensus 1213 ~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~-~gv~~~~~~~v~~i~~~~~g~~~~v~l~~--- 1288 (1466)
+|++|+|+|..|++.+.+|+++++.+.+.. . +.+.+.+++ .||+++++++++++. .+++++..|.+.+
T Consensus 152 ~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~----~~~~~~l~~~~gv~v~~~~~v~~i~-~~~~~v~~v~~~~~~~ 223 (310)
T 1fl2_A 152 GGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---D----QVLQDKLRSLKNVDIILNAQTTEVK-GDGSKVVGLEYRDRVS 223 (310)
T ss_dssp CSHHHHHHHHHHHTTBSEEEEECSSSSCCS---C----HHHHHHHHTCTTEEEESSEEEEEEE-ESSSSEEEEEEEETTT
T ss_pred CCHHHHHHHHHHHHhCCEEEEEEeCcccCc---c----HHHHHHHhhCCCeEEecCCceEEEE-cCCCcEEEEEEEECCC
Confidence 999999999999999999999999886532 2 334555666 699999999999998 4555666676653
Q ss_pred CC--eeecCEEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHH
Q psy2951 1289 GT--TIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYH 1366 (1466)
Q Consensus 1289 g~--~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~q 1366 (1466)
|+ ++++|.||+++|..|++++++.. +.++.+|+|.||++++|+.|+|||+|||+..|.. ++..|..|
T Consensus 224 g~~~~i~~D~vi~a~G~~p~~~~l~~~-l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~----------~~~~A~~~ 292 (310)
T 1fl2_A 224 GDIHNIELAGIFVQIGLLPNTNWLEGA-VERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYK----------QIIIATGE 292 (310)
T ss_dssp CCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCBCSSTTEEECSTTBSCSSC----------CHHHHHHH
T ss_pred CcEEEEEcCEEEEeeCCccCchHHhcc-ccccCCCcEEcCCCCccCCCCEEEeecccCCcch----------hhhhhHhh
Confidence 53 68999999999999999988764 8888889999999999999999999999987632 23789999
Q ss_pred HHHHHHHhcC
Q psy2951 1367 GRIAALNMVE 1376 (1466)
Q Consensus 1367 a~~aa~~i~g 1376 (1466)
|+.||.+|+.
T Consensus 293 g~~aa~~i~~ 302 (310)
T 1fl2_A 293 GAKASLSAFD 302 (310)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999874
No 132
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.97 E-value=1.9e-30 Score=315.37 Aligned_cols=305 Identities=15% Similarity=0.185 Sum_probs=230.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHH---cCCCccEEEEcCCCCCCCCCCccchhcc-cCcccccccCHhHhhhCCcEEEEceE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQ---NGFTGKLYFITDENFLPYDRVKLSKQLD-IKADSILLRTEEFYKDNDIHVIKGKK 670 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~---~g~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~~~~~~~ 670 (1466)
+++|+|||||+||+++|..|++ .|++ |+++++++.+.|.........+ ...+++...+.+++++.|++++.++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~--Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~~~- 80 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHE--VTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQS- 80 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSE--EEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEECSC-
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCE--EEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEEeE-
Confidence 5899999999999999999999 6665 9999999876654322111111 4556677788888989999998765
Q ss_pred EEEeccccccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCC----cEEEecCHHHHHhhcccCC---CCCcEEEECCC
Q psy2951 671 IISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN----KVFYLRTVEDANNIAPHIT---PESNVVVIGSS 743 (1466)
Q Consensus 671 v~~i~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~---~~~~vvVvG~G 743 (1466)
|+.+ +.+.+.+.++++.++.||+||||||++|+.+++| |.+ ..+...+..++..+.+.+. .+++++|||+|
T Consensus 81 v~~i-d~~~~~V~~~~g~~i~~d~lviAtG~~~~~~~ip-G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG 158 (437)
T 3sx6_A 81 AEQI-DAEAQNITLADGNTVHYDYLMIATGPKLAFENVP-GSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAM 158 (437)
T ss_dssp EEEE-ETTTTEEEETTSCEEECSEEEECCCCEECGGGST-TCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEEC
T ss_pred EEEE-EcCCCEEEECCCCEEECCEEEECCCCCcCcccCC-CCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcC
Confidence 9999 8888899999998999999999999999999998 875 4556678888766654321 24567888986
Q ss_pred hH----H--HHHH----HHHhccCCe-----EEEEeecCccCc---cccCHHHHHHHHHHHHhcCcEEEccceEEEEEec
Q psy2951 744 FI----G--MEAA----AFCASKVKS-----VTVVGRGAVPFQ---ESLGKEVGERITKLFESKGVKFVMKANVSSFEKN 805 (1466)
Q Consensus 744 ~~----g--~e~A----~~l~~~g~~-----V~lv~~~~~~~~---~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~ 805 (1466)
.. | +|+| ..+++.|.+ |+++++.+.+.. +.+ ++..+.+.+.++++||++++++++++++.
T Consensus 159 ~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~-~~~~~~~~~~l~~~gI~~~~~~~v~~v~~- 236 (437)
T 3sx6_A 159 AGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGV-GDSKGILTKGLKEEGIEAYTNCKVTKVED- 236 (437)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCC-TTHHHHHHHHHHHTTCEEECSEEEEEEET-
T ss_pred CCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcc-hHHHHHHHHHHHHCCCEEEcCCEEEEEEC-
Confidence 54 3 7777 666677764 999999886521 112 34778889999999999999999999983
Q ss_pred CCCceEEEECCC-----CcEEecCEEEEccccccCccccccCCceeeCCCcEEeCCCCCC-CCCCeEEeccccccCCccc
Q psy2951 806 EKNDVTAANLDN-----GTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLET-NVPGVYAGGDIAYAPLHSF 879 (1466)
Q Consensus 806 ~~~~~~~v~~~~-----g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~~~~~~ 879 (1466)
++........+ ++++++|.+++++|++++..+.+..++ .+++|+|.||+++|| ++|+|||+|||+..+....
T Consensus 237 -~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl-~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~ 314 (437)
T 3sx6_A 237 -NKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGL-CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVET 314 (437)
T ss_dssp -TEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTT-BCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSCC
T ss_pred -CeEEEEecccCCccccceEEEEeEEEEcCCCcCchhhhccccc-cCCCCcEEeChhccCCCCCCEEEEEEEeccCCcCC
Confidence 22111112233 567999999999999988666555677 678899999999999 8999999999998764320
Q ss_pred CCce-eeeccHHHHHHHHHHHHHHhccCCC
Q psy2951 880 YNKN-ASIGHYQLAQYHGRIAALNMVEKKT 908 (1466)
Q Consensus 880 ~~~~-~~~~~~~~A~~~g~~aA~~i~~~~~ 908 (1466)
...+ ..+..++.|..||+.+|+||.....
T Consensus 315 ~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~ 344 (437)
T 3sx6_A 315 TPVPTGAPKTGYMIESMVSAAVHNIKADLE 344 (437)
T ss_dssp CSSCCCCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred CcCCCCCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 0000 1245788999999999999985433
No 133
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.97 E-value=5.1e-30 Score=299.38 Aligned_cols=283 Identities=16% Similarity=0.171 Sum_probs=212.7
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEE-EcCCCCCCCCCCc---c---chhc-ccCcccccccCHhHhhhCCcEE
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYF-ITDENFLPYDRVK---L---SKQL-DIKADSILLRTEEFYKDNDIHV 665 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~-~~~~~~~~~~~~~---~---~~~~-~~~~~~~~~~~~~~~~~~gv~~ 665 (1466)
.++||+|||||+|||+||..|+++|++ |++ +|+. .+++.... . .... .....++..++.+++++.++++
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~--v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 79 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLK--NVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKH 79 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCS--CEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCC--eEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEE
Confidence 468999999999999999999999998 555 8873 22221110 0 0000 1234566667777888899999
Q ss_pred EEceEEEEeccc--cccEE-EccCCCEEecCEEEEcCCCCCCcCCCCCCCCc-----EEEecCHHHHHhhcccCCCCCcE
Q psy2951 666 IKGKKIISDSEL--NEKKI-KLQDGTSIDFTKIYLATGSSPRTISQADGVNK-----VFYLRTVEDANNIAPHITPESNV 737 (1466)
Q Consensus 666 ~~~~~v~~i~~~--~~~~v-~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~~-----~~~~~~~~~~~~~~~~~~~~~~v 737 (1466)
+.++ |..+.+. ....+ ...++ ++.||+||+|||+.|+.|+++ |.+. ++.. .. .......++++
T Consensus 80 ~~~~-v~~i~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~~~~~-g~~~~~~~~~~~~---~~---~~~~~~~~~~v 150 (315)
T 3r9u_A 80 EMVG-VEQILKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKKAGFK-GEDEFFGKGVSTC---AT---CDGFFYKNKEV 150 (315)
T ss_dssp ECCC-EEEEEECTTSCEEEEETTSC-EEEEEEEEECCCEEECCCCCB-TTTTTBTTTEESC---HH---HHGGGGTTSEE
T ss_pred EEEE-EEEEecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCCCCCC-ChhhcCCCeEEee---ec---ccccccCcCEE
Confidence 9985 7766122 23443 33344 899999999999999999888 7651 2211 11 12223358999
Q ss_pred EEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECC-
Q psy2951 738 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLD- 816 (1466)
Q Consensus 738 vVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~- 816 (1466)
+|||+|.+|+|+|..|++.+.+|+++++.+.+. .+++ .+.+.+++.||++++++.+.++... ++++..+.+.
T Consensus 151 ~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~---~~~~---~~~~~~~~~gv~~~~~~~v~~i~~~-~~~~~~v~~~~ 223 (315)
T 3r9u_A 151 AVLGGGDTALEEALYLANICSKIYLIHRRDEFR---AAPS---TVEKVKKNEKIELITSASVDEVYGD-KMGVAGVKVKL 223 (315)
T ss_dssp EEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB---SCHH---HHHHHHHCTTEEEECSCEEEEEEEE-TTEEEEEEEEC
T ss_pred EEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC---CCHH---HHHHHHhcCCeEEEeCcEEEEEEcC-CCcEEEEEEEc
Confidence 999999999999999999999999999988653 2233 3445567899999999999999843 3345445544
Q ss_pred -CCc--EEecCEEEEccccccCcccccc---CC-ceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccH
Q psy2951 817 -NGT--TIPADLVIVGIGTVLNTNYLDG---KG-VELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHY 889 (1466)
Q Consensus 817 -~g~--~i~~D~vi~a~G~~p~~~~~~~---~g-l~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~ 889 (1466)
+|+ ++++|.||+|+|++|++.+++. +| ++++++|+|.+|++++|+.|+|||+|||+..+. ..+
T Consensus 224 ~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t~~~~v~a~GD~~~~~~----------~~~ 293 (315)
T 3r9u_A 224 KDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFAAGDLRKDAP----------KQV 293 (315)
T ss_dssp TTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECGGGBTTCC----------CCH
T ss_pred CCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCcccCCCCEEEeecccCCch----------hhh
Confidence 775 7999999999999999988766 65 889999999999999999999999999986432 245
Q ss_pred HHHHHHHHHHHHHhcc
Q psy2951 890 QLAQYHGRIAALNMVE 905 (1466)
Q Consensus 890 ~~A~~~g~~aA~~i~~ 905 (1466)
..|+.||+.||.+|..
T Consensus 294 ~~A~~~g~~aa~~i~~ 309 (315)
T 3r9u_A 294 ICAAGDGAVAALSAMA 309 (315)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hhHHhhHHHHHHHHHH
Confidence 7999999999999864
No 134
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.97 E-value=2.7e-30 Score=305.08 Aligned_cols=283 Identities=19% Similarity=0.231 Sum_probs=216.4
Q ss_pred CCCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCC----CCCCCC---------CCCchhhccCcccccccChhhhc
Q psy2951 1064 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN----FLPYDR---------VKLSKQLDIKADSILLRTEEFYK 1130 (1466)
Q Consensus 1064 ~~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~----~~~~~~---------~~l~~~~~~~~~~~~~~~~~~~~ 1130 (1466)
..+++|+|||||+||+++|..|++.|+ +|+|||+++ .++... +.+... .....+.....+++.
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~--~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 95 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEI--KPILYEGMMANGIAAGGQLTTTTEIENFPGFPDG--LTGSELMDRMREQST 95 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTC--CCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTC--EEHHHHHHHHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC--CEEEEecCCCCCCCcCcccccchhhcccCCCccc--CCHHHHHHHHHHHHH
Confidence 346799999999999999999999998 899999965 222110 000000 011122222335566
Q ss_pred cCCcEEEcCCeEEEeecCCCCeEEe-----cCCcEEecCeEEEecCCCCCcCCCCCCCC-----cEEEecCHHHHHhhhc
Q psy2951 1131 DNDIHVIKGKKIISDSELNEKKIKL-----QDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAP 1200 (1466)
Q Consensus 1131 ~~~v~~~~~~~v~~i~d~~~~~v~~-----~~g~~~~yd~lvlAtG~~~~~~~~~~g~~-----~v~~~~~~~~~~~l~~ 1200 (1466)
+.+++++.++ |..+ +...+.+.+ +++..+.||+||+|||+.|+.+++| |.+ .+++....+. ...
T Consensus 96 ~~gv~i~~~~-v~~i-~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~~~-g~~~~~~~~~~~~~~~~~---~~~ 169 (338)
T 3itj_A 96 KFGTEIITET-VSKV-DLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLP-GEETYWQKGISACAVCDG---AVP 169 (338)
T ss_dssp HTTCEEECSC-EEEE-ECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCCCCT-THHHHBTTTEESCHHHHT---TSG
T ss_pred HcCCEEEEeE-EEEE-EEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCCCCC-CchhccCccEEEchhccc---chh
Confidence 7799999998 9999 988776665 4677899999999999999999888 754 3433321111 111
Q ss_pred ccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhC-CcEEEcCceEEEEEecCCC
Q psy2951 1201 HITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESK-GVKFVMKANVSSFEKNEKN 1279 (1466)
Q Consensus 1201 ~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~-gv~~~~~~~v~~i~~~~~g 1279 (1466)
...+++++|||+|.+|+|+|..|++.|.+|+++++.+.++. .+.+.+.+.+. ||++++++.+++++ .+++
T Consensus 170 -~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~-------~~~~~~~l~~~~gv~i~~~~~v~~i~-~~~~ 240 (338)
T 3itj_A 170 -IFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA-------STIMQKRAEKNEKIEILYNTVALEAK-GDGK 240 (338)
T ss_dssp -GGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------CHHHHHHHHHCTTEEEECSEEEEEEE-ESSS
T ss_pred -hcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------CHHHHHHHHhcCCeEEeecceeEEEE-cccC
Confidence 23589999999999999999999999999999999886653 23444555554 99999999999998 4555
Q ss_pred cEEEEEcCC-----CCeeecCEEEEeeccccCccccccCCceeeCCCeEEe-CCCccccCCCEEEecccccCCCccCCCc
Q psy2951 1280 DVTAANLDN-----GTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVV-NEYLETNVPGVYAGGDIAYAPLHSFYNK 1353 (1466)
Q Consensus 1280 ~~~~v~l~~-----g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~v-d~~~~t~~~~v~a~GD~a~~p~~~~~~~ 1353 (1466)
++..|.+.+ ++++++|.||+++|..|++++++. ++.++.+|++.+ |++++|+.|+|||+|||+..+..
T Consensus 241 ~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~-~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~~----- 314 (338)
T 3itj_A 241 LLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAG-QVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYR----- 314 (338)
T ss_dssp SEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBT-TBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSCC-----
T ss_pred cEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhC-ceEecCCCcEEEcCcccccCCCCEEEeeccCCCCcc-----
Confidence 676677765 468999999999999999999887 899998898885 89999999999999999975321
Q ss_pred eeeeecHHHHHHHHHHHHHHhcC
Q psy2951 1354 NASIGHYQLAQYHGRIAALNMVE 1376 (1466)
Q Consensus 1354 ~~~~~~~~~A~~qa~~aa~~i~g 1376 (1466)
.+..|..||+.||.+|+.
T Consensus 315 -----~~~~A~~~g~~aa~~i~~ 332 (338)
T 3itj_A 315 -----QAITSAGSGCMAALDAEK 332 (338)
T ss_dssp -----CHHHHHHHHHHHHHHHHH
T ss_pred -----ceeeehhhhHHHHHHHHH
Confidence 247899999999999874
No 135
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.97 E-value=7.1e-30 Score=299.01 Aligned_cols=280 Identities=20% Similarity=0.252 Sum_probs=213.1
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCC---Cchh--hc--cCcccccccChhhhccCCcEEEc
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK---LSKQ--LD--IKADSILLRTEEFYKDNDIHVIK 1138 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~---l~~~--~~--~~~~~~~~~~~~~~~~~~v~~~~ 1138 (1466)
+++|+|||||+||+++|..|++.|+ +|+|||++. ++..... +... +. .....+.....+.+++.+++++.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~--~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~ 84 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQL--STLILEKGM-PGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM 84 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC--CEEEEESSC-TTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCC--cEEEEeCCC-CCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe
Confidence 4689999999999999999999998 999999983 2111000 0000 00 01112222223456677999988
Q ss_pred CCeEEEeecCC--C---CeEEecCCcEEecCeEEEecCCCCCcCCCCCCCC-----cEEEecCHHHHHhhhcccCCCCeE
Q psy2951 1139 GKKIISDSELN--E---KKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESNV 1208 (1466)
Q Consensus 1139 ~~~v~~i~d~~--~---~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~-----~v~~~~~~~~~~~l~~~~~~~~~v 1208 (1466)
+ +|..+ +.. . ..|.+.+|.++.||+||+|||+.|+.++++ |.+ ++++....++ ....+++|
T Consensus 85 ~-~v~~i-~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~i~-g~~~~~~~~~~~~~~~~~------~~~~~~~v 155 (325)
T 2q7v_A 85 D-EVQGV-QHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKLGIP-GEDNFWGKGVSTCATCDG------FFYKGKKV 155 (325)
T ss_dssp C-CEEEE-EECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCCCCT-TTTTTBTTTEESCHHHHG------GGGTTCEE
T ss_pred e-eEEEE-EeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCC-ChhhccCceEEEeccCCH------HHcCCCEE
Confidence 5 69999 765 3 467788888999999999999999988888 764 3454432221 22347999
Q ss_pred EEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcC-
Q psy2951 1209 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLD- 1287 (1466)
Q Consensus 1209 vVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~- 1287 (1466)
+|||+|.+|+|+|..|++.|.+|+++++.+.+.. .+.+ ..+++++.||+++++++++++. . ++++..|.+.
T Consensus 156 ~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~~~~---~~~l~~~~gv~i~~~~~v~~i~-~-~~~v~~v~~~~ 227 (325)
T 2q7v_A 156 VVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA---NKVA---QARAFANPKMKFIWDTAVEEIQ-G-ADSVSGVKLRN 227 (325)
T ss_dssp EEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS---CHHH---HHHHHTCTTEEEECSEEEEEEE-E-SSSEEEEEEEE
T ss_pred EEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc---chHH---HHHHHhcCCceEecCCceEEEc-c-CCcEEEEEEEE
Confidence 9999999999999999999999999999875532 2222 2233345799999999999998 3 3556567765
Q ss_pred --CCC--eeecCEEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHH
Q psy2951 1288 --NGT--TIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLA 1363 (1466)
Q Consensus 1288 --~g~--~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A 1363 (1466)
+|+ ++++|.||+|+|..|++++++.. +.++.+|+|.||++++|++|+|||+|||+..+. ..|..|
T Consensus 228 ~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~----------~~~~~A 296 (325)
T 2q7v_A 228 LKTGEVSELATDGVFIFIGHVPNTAFVKDT-VSLRDDGYVDVRDEIYTNIPMLFAAGDVSDYIY----------RQLATS 296 (325)
T ss_dssp TTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCBTTTBCSSTTEEECSTTTCSSC----------CCHHHH
T ss_pred CCCCcEEEEEcCEEEEccCCCCChHHHhhh-cccCCCccEecCCCCccCCCCEEEeecccCccH----------HHHHHH
Confidence 675 78999999999999999999877 788888999999999999999999999998641 135899
Q ss_pred HHHHHHHHHHhcC
Q psy2951 1364 QYHGRIAALNMVE 1376 (1466)
Q Consensus 1364 ~~qa~~aa~~i~g 1376 (1466)
..||+.||.||+.
T Consensus 297 ~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 297 VGAGTRAAMMTER 309 (325)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999985
No 136
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.97 E-value=4e-30 Score=300.79 Aligned_cols=283 Identities=19% Similarity=0.248 Sum_probs=215.9
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCcc---ch--hc--ccCcccccccCHhHhhhCCcEEEE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKL---SK--QL--DIKADSILLRTEEFYKDNDIHVIK 667 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~---~~--~~--~~~~~~~~~~~~~~~~~~gv~~~~ 667 (1466)
.+||+||||||||+++|+.|++.|++ |+++|+.. .+...... .. .+ .....++..++.+.+.+.+++++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~--v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQ--PVLITGME-KGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIF 81 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCC--CEEECCSS-TTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEEC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCc--EEEEccCC-CCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE
Confidence 47999999999999999999999988 66777542 12110000 00 00 012334555556677788999999
Q ss_pred ceEEEEeccccccEEE-ccCCCEEecCEEEEcCCCCCCcCCCCCCCC-----cEEEecCHHHHHhhcccCCCCCcEEEEC
Q psy2951 668 GKKIISDSELNEKKIK-LQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESNVVVIG 741 (1466)
Q Consensus 668 ~~~v~~i~~~~~~~v~-~~~~~~~~~d~lviAtG~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~vvVvG 741 (1466)
++ +..+ +.....+. +.++.++.||+||+|||+.|..|+++ |.+ .++... ... ..+..+++|+|||
T Consensus 82 ~~-v~~i-~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~~~~~~-g~~~~~~~~~~~~~---~~~---~~~~~~~~v~ViG 152 (320)
T 1trb_A 82 DH-INKV-DLQNRPFRLNGDNGEYTCDALIIATGASARYLGLP-SEEAFKGRGVSACA---TSD---GFFYRNQKVAVIG 152 (320)
T ss_dssp CC-EEEE-ECSSSSEEEEESSCEEEEEEEEECCCEEECCCCCH-HHHHTBTTTEESCH---HHH---GGGGTTSEEEEEC
T ss_pred ee-eeEE-EecCCEEEEEeCCCEEEcCEEEECCCCCcCCCCCC-ChHHhCCceeEecc---cCC---ccccCCCeEEEEC
Confidence 98 8887 54433222 56778999999999999999888887 643 222221 111 2234589999999
Q ss_pred CChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCC----
Q psy2951 742 SSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDN---- 817 (1466)
Q Consensus 742 ~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~---- 817 (1466)
+|++|+|+|..|++.+.+|+++++.+.+. .++.+.+.+.+.+++.||+++++++++++..+ ++++..+.+.+
T Consensus 153 ~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~~ 228 (320)
T 1trb_A 153 GGNTAVEEALYLSNIASEVHLIHRRDGFR---AEKILIKRLMDKVENGNIILHTNRTLEEVTGD-QMGVTGVRLRDTQNS 228 (320)
T ss_dssp SSHHHHHHHHHHTTTSSEEEEECSSSSCC---CCHHHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSSEEEEEEECCTTC
T ss_pred CCHHHHHHHHHHHhcCCeEEEEEeCCccc---cCHHHHHHHHHhcccCCeEEEcCceeEEEEcC-CCceEEEEEEeccCC
Confidence 99999999999999999999999987653 35777788888899999999999999999843 33555565543
Q ss_pred C--cEEecCEEEEccccccCccccccCCceeeCCCcEEeCCCC-----CCCCCCeEEeccccccCCcccCCceeeeccHH
Q psy2951 818 G--TTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYL-----ETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQ 890 (1466)
Q Consensus 818 g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~-----~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~ 890 (1466)
| +++++|.||+|+|++|++++++ .+++++ +|++.+|+++ +|+.|+|||+|||+..+.. .+.
T Consensus 229 g~~~~i~~D~vv~a~G~~p~~~~~~-~~l~~~-~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~----------~~~ 296 (320)
T 1trb_A 229 DNIESLDVAGLFVAIGHSPNTAIFE-GQLELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYR----------QAI 296 (320)
T ss_dssp CCCEEEECSEEEECSCEEESCGGGT-TTSCEE-TTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSC----------CHH
T ss_pred CceEEEEcCEEEEEeCCCCChHHhc-cccccc-CceEEECCCcccccccCCCCCEEEcccccCCcch----------hhh
Confidence 4 5799999999999999998887 468888 8999999987 8999999999999986422 357
Q ss_pred HHHHHHHHHHHHhcc
Q psy2951 891 LAQYHGRIAALNMVE 905 (1466)
Q Consensus 891 ~A~~~g~~aA~~i~~ 905 (1466)
.|+.||+.||.+|..
T Consensus 297 ~A~~~g~~aa~~i~~ 311 (320)
T 1trb_A 297 TSAGTGCMAALDAER 311 (320)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hhhccHHHHHHHHHH
Confidence 899999999999864
No 137
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.97 E-value=1.6e-30 Score=313.74 Aligned_cols=294 Identities=14% Similarity=0.129 Sum_probs=224.4
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc-cCcccccccCHhHhhhCCcEEEEceEEEE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD-IKADSILLRTEEFYKDNDIHVIKGKKIIS 673 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 673 (1466)
.|||||||||+||++||.+|++++++.+|+++|+++.+.+.........+ .+.+++... .+.+.+.|++++.++ |+.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~-~~~~~~~gv~~i~~~-v~~ 79 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVG-YDGLRAHGIQVVHDS-ALG 79 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEEC-SHHHHHTTCEEECSC-EEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhC-HHHHHHCCCEEEEeE-EEE
Confidence 58999999999999999999999998899999998764443222111112 344444433 345567899999988 999
Q ss_pred eccccccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCC------cEEEecCHHHHHhhcccC---CCCCcEEEECCC-
Q psy2951 674 DSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN------KVFYLRTVEDANNIAPHI---TPESNVVVIGSS- 743 (1466)
Q Consensus 674 i~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~------~~~~~~~~~~~~~~~~~~---~~~~~vvVvG~G- 743 (1466)
+ |++++.+.+.++.++.||+||||||+++..++++ |.+ .++.+++.+++..+.+.+ ..+..+++.+++
T Consensus 80 i-d~~~~~v~~~~g~~i~yd~LviAtG~~~~~~~i~-G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~ 157 (401)
T 3vrd_B 80 I-DPDKKLVKTAGGAEFAYDRCVVAPGIDLLYDKIE-GYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAP 157 (401)
T ss_dssp E-ETTTTEEEETTSCEEECSEEEECCCEEECGGGSB-TCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSS
T ss_pred E-EccCcEEEecccceeecceeeeccCCccccCCcc-CchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCc
Confidence 9 9999999999999999999999999999999998 765 334556666665554333 334445444332
Q ss_pred -----h----HHHHHHHHHhccC--CeEEEEeecCccC-ccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceE
Q psy2951 744 -----F----IGMEAAAFCASKV--KSVTVVGRGAVPF-QESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVT 811 (1466)
Q Consensus 744 -----~----~g~e~A~~l~~~g--~~V~lv~~~~~~~-~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~ 811 (1466)
. .+++++..+++.+ .+|+++++.+.+. .+.+++.+.+.+.+.+++.||+++++.++..++.+.+. .
T Consensus 158 ~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~--~ 235 (401)
T 3vrd_B 158 PFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEA--M 235 (401)
T ss_dssp SCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTT--T
T ss_pred cEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccc--e
Confidence 1 4566777777664 7899998887653 23456667677777788999999999999888744332 3
Q ss_pred EEECCCCcEEecCEEEEccccccCccccccCCceeeCCCcEEeCCC-CC-CCCCCeEEecccccc-CCcccCCceeeecc
Q psy2951 812 AANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEY-LE-TNVPGVYAGGDIAYA-PLHSFYNKNASIGH 888 (1466)
Q Consensus 812 ~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~-~~-t~~~~iya~GD~~~~-~~~~~~~~~~~~~~ 888 (1466)
.+.+++|+++++|++++++|++|+ .+++++++ .+++|+|.||++ || |++|||||+|||+.. |.+ ++
T Consensus 236 ~v~~~~g~~i~~D~vi~~~g~~~~-~~~~~~gl-~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~p---------k~ 304 (401)
T 3vrd_B 236 TVETSFGETFKAAVINLIPPQRAG-KIAQSASL-TNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMP---------KS 304 (401)
T ss_dssp EEEETTSCEEECSEEEECCCEEEC-HHHHHTTC-CCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSC---------BS
T ss_pred EEEcCCCcEEEeeEEEEecCcCCc-hhHhhccc-cccCCCEEECCCcceecCCCCEEEecccccCCCCC---------ch
Confidence 578899999999999999999998 67888888 578899999986 65 789999999999864 322 36
Q ss_pred HHHHHHHHHHHHHHhcc
Q psy2951 889 YQLAQYHGRIAALNMVE 905 (1466)
Q Consensus 889 ~~~A~~~g~~aA~~i~~ 905 (1466)
++.|..||+++|+||+.
T Consensus 305 a~~A~~qa~v~A~ni~~ 321 (401)
T 3vrd_B 305 AYSANSQAKVAAAAVVA 321 (401)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 78999999999999974
No 138
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.97 E-value=1.1e-31 Score=356.27 Aligned_cols=312 Identities=19% Similarity=0.280 Sum_probs=224.0
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcccCcccccccCHhHhhhCCcEEEEceEEEE
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKIIS 673 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 673 (1466)
+.++|+||||||||++||..|+++|++ .|+++|+.+.+++....-...+. ...++..+..+++++.||+++.++.+.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~-~Vtv~E~~~~~GG~~~~~ip~~~-~~~~~~~~~~~~~~~~gv~~~~~~~v~- 262 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYS-DITIFEKQEYVGGLSTSEIPQFR-LPYDVVNFEIELMKDLGVKIICGKSLS- 262 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCC-CEEEEESSSSCSTHHHHTSCTTT-SCHHHHHHHHHHHHTTTCEEEESCCBS-
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCC-cEEEEeCCCCCCccccccCCccc-CCHHHHHHHHHHHHHCCcEEEcccEec-
Confidence 468999999999999999999999984 48889987655532100000011 122344455677888999999998442
Q ss_pred eccccccEEEccCCCEEecCEEEEcCCC-CCCcCCCCCCCC---cEEEecCHHHHHh---------hccc-CCCCCcEEE
Q psy2951 674 DSELNEKKIKLQDGTSIDFTKIYLATGS-SPRTISQADGVN---KVFYLRTVEDANN---------IAPH-ITPESNVVV 739 (1466)
Q Consensus 674 i~~~~~~~v~~~~~~~~~~d~lviAtG~-~~~~~~~~~g~~---~~~~~~~~~~~~~---------~~~~-~~~~~~vvV 739 (1466)
.+.++++++.++.||+||||||+ +|+.+++++|.+ ++++..++..... +... ...+++|+|
T Consensus 263 -----~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvV 337 (1025)
T 1gte_A 263 -----ENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIV 337 (1025)
T ss_dssp -----TTSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEE
T ss_pred -----cceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHHHHHHHhhcccccccccccccccCCcEEE
Confidence 12344444456789999999998 588776543543 5665433222111 1111 123679999
Q ss_pred ECCChHHHHHHHHHhccCC-eEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECC--
Q psy2951 740 IGSSFIGMEAAAFCASKVK-SVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLD-- 816 (1466)
Q Consensus 740 vG~G~~g~e~A~~l~~~g~-~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~-- 816 (1466)
||||++|+|+|..++++|. +||+++|.+..+.+.++.++ +.+++.||+++++..++++.. +++++..+.+.
T Consensus 338 IGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~e~-----~~~~~~Gv~~~~~~~~~~i~~-~~g~v~~v~~~~~ 411 (1025)
T 1gte_A 338 LGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPEEV-----ELAKEEKCEFLPFLSPRKVIV-KGGRIVAVQFVRT 411 (1025)
T ss_dssp ECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHHHH-----HHHHHTTCEEECSEEEEEEEE-ETTEEEEEEEEEE
T ss_pred ECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCHHHH-----HHHHHcCCEEEeCCCceEEEc-cCCeEEEEEEEEe
Confidence 9999999999999999995 89999998854434444443 456788999999999999974 34555545432
Q ss_pred ----CC---------cEEecCEEEEccccccC-cccccc-CCceeeCCCcEEeCC-CCCCCCCCeEEeccccccCCcccC
Q psy2951 817 ----NG---------TTIPADLVIVGIGTVLN-TNYLDG-KGVELNGQKAVVVNE-YLETNVPGVYAGGDIAYAPLHSFY 880 (1466)
Q Consensus 817 ----~g---------~~i~~D~vi~a~G~~p~-~~~~~~-~gl~~~~~G~i~vd~-~~~t~~~~iya~GD~~~~~~~~~~ 880 (1466)
+| .++++|.||+|+|++|+ ..|++. .|++++++|+|.||+ +++|+.|+|||+|||+..+..
T Consensus 412 ~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~~~--- 488 (1025)
T 1gte_A 412 EQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMANT--- 488 (1025)
T ss_dssp EECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCSCCC---
T ss_pred EEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccCCCCEEEeCCCCCCchH---
Confidence 22 37899999999999874 566665 589999999999997 899999999999999976543
Q ss_pred CceeeeccHHHHHHHHHHHHHHhcc-------CC-CcCcccCeeeee--ecCceeEEeec
Q psy2951 881 NKNASIGHYQLAQYHGRIAALNMVE-------KK-TSLSTIPFFWTM--LFGVGFRFAGY 930 (1466)
Q Consensus 881 ~~~~~~~~~~~A~~~g~~aA~~i~~-------~~-~~~~~~~~~~~~--~~~~~~~~~g~ 930 (1466)
+..|+.||+.||.+|.+ .. ..++.+||||+. .++++..+.|+
T Consensus 489 --------~~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~~~p~~~~ev~~v~ls~~~~G~ 540 (1025)
T 1gte_A 489 --------TVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYTPVDLVDISVEMAGL 540 (1025)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCCBCCCCCGGGGCCCCEEETTE
T ss_pred --------HHHHHHHHHHHHHHHHHHHHhccCCCcccCcCccccccccccccceeeeccc
Confidence 47899999999999974 11 245789999983 55555555554
No 139
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.97 E-value=8.9e-30 Score=297.81 Aligned_cols=281 Identities=19% Similarity=0.254 Sum_probs=218.7
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCC---------CCCCCchhhccCcccccccChhhhccCCcEE
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY---------DRVKLSKQLDIKADSILLRTEEFYKDNDIHV 1136 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~---------~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~ 1136 (1466)
+++|+|||||+||+++|..|++.|. +|+|||+.. ++. ..+.++.. .....+......++.+.++++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~--~v~lie~~~-~gg~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 79 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANL--QPVLITGME-KGGQLTTTTEVENWPGDPND--LTGPLLMERMHEHATKFETEI 79 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTC--CCEEECCSS-TTGGGGGCSBCCCSTTCCSS--CBHHHHHHHHHHHHHHTTCEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC--cEEEEccCC-CCceEecchhhhhCCCCCCC--CCHHHHHHHHHHHHHHCCCEE
Confidence 3689999999999999999999998 899999642 111 01111100 011122222234566779999
Q ss_pred EcCCeEEEeecCCCCeEE-ecCCcEEecCeEEEecCCCCCcCCCCCCCC-----cEEEecCHHHHHhhhcccCCCCeEEE
Q psy2951 1137 IKGKKIISDSELNEKKIK-LQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESNVVV 1210 (1466)
Q Consensus 1137 ~~~~~v~~i~d~~~~~v~-~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~-----~v~~~~~~~~~~~l~~~~~~~~~vvV 1210 (1466)
+.++ |..+ +...+.+. +.++.++.||+||+|||+.|+.+++| |.+ ++++..+.++ .+..+++|+|
T Consensus 80 ~~~~-v~~i-~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~~~~~~-g~~~~~~~~~~~~~~~~~------~~~~~~~v~V 150 (320)
T 1trb_A 80 IFDH-INKV-DLQNRPFRLNGDNGEYTCDALIIATGASARYLGLP-SEEAFKGRGVSACATSDG------FFYRNQKVAV 150 (320)
T ss_dssp ECCC-EEEE-ECSSSSEEEEESSCEEEEEEEEECCCEEECCCCCH-HHHHTBTTTEESCHHHHG------GGGTTSEEEE
T ss_pred EEee-eeEE-EecCCEEEEEeCCCEEEcCEEEECCCCCcCCCCCC-ChHHhCCceeEecccCCc------cccCCCeEEE
Confidence 9997 9999 87666554 56788999999999999999888887 643 3444332222 2345899999
Q ss_pred EcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCC--
Q psy2951 1211 IGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDN-- 1288 (1466)
Q Consensus 1211 vG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~-- 1288 (1466)
||+|.+|+|+|..|++.|.+|+++++.+.+. .++.+.+.+.+.+++.||++++++++++++ .+++++..|.+.+
T Consensus 151 iG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~-~~~~~v~~v~~~~~~ 226 (320)
T 1trb_A 151 IGGGNTAVEEALYLSNIASEVHLIHRRDGFR---AEKILIKRLMDKVENGNIILHTNRTLEEVT-GDQMGVTGVRLRDTQ 226 (320)
T ss_dssp ECSSHHHHHHHHHHTTTSSEEEEECSSSSCC---CCHHHHHHHHHHHHTSSEEEECSCEEEEEE-ECSSSEEEEEEECCT
T ss_pred ECCCHHHHHHHHHHHhcCCeEEEEEeCCccc---cCHHHHHHHHHhcccCCeEEEcCceeEEEE-cCCCceEEEEEEecc
Confidence 9999999999999999999999999987654 256777788888999999999999999998 4445666677754
Q ss_pred --C--CeeecCEEEEeeccccCccccccCCceeeCCCeEEeCCCc-----cccCCCEEEecccccCCCccCCCceeeeec
Q psy2951 1289 --G--TTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYL-----ETNVPGVYAGGDIAYAPLHSFYNKNASIGH 1359 (1466)
Q Consensus 1289 --g--~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~-----~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~ 1359 (1466)
| +++++|.||+|+|..|++++++ .++.++ +|++.||+++ +|+.|+|||+|||+..+.. .
T Consensus 227 ~~g~~~~i~~D~vv~a~G~~p~~~~~~-~~l~~~-~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~----------~ 294 (320)
T 1trb_A 227 NSDNIESLDVAGLFVAIGHSPNTAIFE-GQLELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYR----------Q 294 (320)
T ss_dssp TCCCCEEEECSEEEECSCEEESCGGGT-TTSCEE-TTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSC----------C
T ss_pred CCCceEEEEcCEEEEEeCCCCChHHhc-cccccc-CceEEECCCcccccccCCCCCEEEcccccCCcch----------h
Confidence 4 5789999999999999999887 578888 8999999987 8999999999999987532 2
Q ss_pred HHHHHHHHHHHHHHhcC
Q psy2951 1360 YQLAQYHGRIAALNMVE 1376 (1466)
Q Consensus 1360 ~~~A~~qa~~aa~~i~g 1376 (1466)
+..|..||+.||.+|..
T Consensus 295 ~~~A~~~g~~aa~~i~~ 311 (320)
T 1trb_A 295 AITSAGTGCMAALDAER 311 (320)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhhhhccHHHHHHHHHH
Confidence 47899999999999874
No 140
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.97 E-value=8.8e-30 Score=307.74 Aligned_cols=290 Identities=18% Similarity=0.230 Sum_probs=230.2
Q ss_pred CCeEEEEcCchHHHHHHHHHHH---cCCCccEEEEcCCCCCCCCCCccchhcc-cCcccccccCHhHhhhCCcEEEEceE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQ---NGFTGKLYFITDENFLPYDRVKLSKQLD-IKADSILLRTEEFYKDNDIHVIKGKK 670 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~---~g~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~~~~~~~ 670 (1466)
+++|+|||||+||+++|..|++ .|++ |+++|+++.+.+.......... ...+++...+.+.+++.+++++.+ +
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~~--V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~ 77 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKAD--VKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-T 77 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGSE--EEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-E
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCe--EEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-e
Confidence 3689999999999999999999 7766 8999998765554332221112 455667777788888899999998 5
Q ss_pred EEEeccccccEEEccCCCE----EecCEEEEcCCCCCCcCCCCCCCC-cEEEecCHHHHHhhcccCCC-CCcEEEECCCh
Q psy2951 671 IISDSELNEKKIKLQDGTS----IDFTKIYLATGSSPRTISQADGVN-KVFYLRTVEDANNIAPHITP-ESNVVVIGSSF 744 (1466)
Q Consensus 671 v~~i~~~~~~~v~~~~~~~----~~~d~lviAtG~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~-~~~vvVvG~G~ 744 (1466)
|+.+ +.+.+.+.+.++.. +.||+||+|||++|..|+++ |.+ ..+...+.+++..+.+.+.. .++++|||+|.
T Consensus 78 v~~i-~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ip-G~~~~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~ 155 (409)
T 3h8l_A 78 VEKI-DAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVK-GWDKYGYSVCEPEFATKLREKLESFQGGNIAIGSGP 155 (409)
T ss_dssp EEEE-ETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGGSB-THHHHCEESSSTTHHHHHHHHHHHCCSEEEEEEECC
T ss_pred EEEE-eCCCCEEEEccCCcccceeeCCEEEECCCCCcCccCCC-ChhhcCcCcCCHHHHHHHHHHHHHhcCCeEEEEecc
Confidence 9999 88888888877654 99999999999999999898 876 56666777777666543322 26677999992
Q ss_pred -------------------------HHHHHH----HHHhccCC----eEEEEeecCccCccccCHHHHHHHHHHHHhcCc
Q psy2951 745 -------------------------IGMEAA----AFCASKVK----SVTVVGRGAVPFQESLGKEVGERITKLFESKGV 791 (1466)
Q Consensus 745 -------------------------~g~e~A----~~l~~~g~----~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv 791 (1466)
.++|+| ..+++.|. +|+++++.+ .+ +.+++++.+.+.+.+++.||
T Consensus 156 f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l-~~~~~~~~~~~~~~l~~~gV 233 (409)
T 3h8l_A 156 FYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YL-SDLSPNSRKAVASIYNQLGI 233 (409)
T ss_dssp BCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SS-TTBCHHHHHHHHHHHHHHTC
T ss_pred cccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-cc-cccCHHHHHHHHHHHHHCCC
Confidence 466766 55667774 899999987 43 56789999999999999999
Q ss_pred EEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccCccccccCCce-eeCCCcEEeCCCCCC-CCCCeEEec
Q psy2951 792 KFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVE-LNGQKAVVVNEYLET-NVPGVYAGG 869 (1466)
Q Consensus 792 ~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~-~~~~G~i~vd~~~~t-~~~~iya~G 869 (1466)
+++++++|++++.+ .+.+++|+++++|+||+++|++|+ .+++..++. .+++|++.||+++|| +.|||||+|
T Consensus 234 ~~~~~~~v~~i~~~------~v~~~~g~~~~~D~vi~a~G~~~~-~~l~~~~~~l~~~~G~i~vd~~~~~~~~~~vfa~G 306 (409)
T 3h8l_A 234 KLVHNFKIKEIREH------EIVDEKGNTIPADITILLPPYTGN-PALKNSTPDLVDDGGFIPTDLNMVSIKYDNVYAVG 306 (409)
T ss_dssp EEECSCCEEEECSS------EEEETTSCEEECSEEEEECCEECC-HHHHTSCGGGSCTTSCBCBBTTSBBSSCTTEEECG
T ss_pred EEEcCCceEEECCC------eEEECCCCEEeeeEEEECCCCCcc-HHHHhccccCcCCCCCEEeCcccccCCCCCEEEee
Confidence 99999999999832 377889999999999999999998 566666333 467899999999999 899999999
Q ss_pred cccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCC
Q psy2951 870 DIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK 907 (1466)
Q Consensus 870 D~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~ 907 (1466)
||+..+.+. .+..|..||+.+|+||.+..
T Consensus 307 D~~~~~~~~---------~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 307 DANSMTVPK---------LGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp GGBTTCCSC---------CHHHHHHHHHHHHHHHHHHT
T ss_pred hhccCCCCc---------HHHHHHHHHHHHHHHHHHHh
Confidence 999864433 56789999999999997543
No 141
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.97 E-value=6.3e-30 Score=295.65 Aligned_cols=280 Identities=14% Similarity=0.172 Sum_probs=203.6
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCC---CCCCCchhhccCcccccccChhhhccC-CcEEEcCC
Q psy2951 1065 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY---DRVKLSKQLDIKADSILLRTEEFYKDN-DIHVIKGK 1140 (1466)
Q Consensus 1065 ~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~ 1140 (1466)
..++|+||||||||++||..|++.|. +|+|||++..-+. ..+.+.........++.....+...++ .+.+...+
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~--~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARK--QIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKT 82 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTC--CEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECC
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCC--CEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeE
Confidence 35789999999999999999999998 9999998742110 000000000001111111111222333 45665555
Q ss_pred eEEEee--cCCCCeEEecCCcEEecCeEEEecCCCCCcCCCCCCCC-----cEEEecCHHHHHhhhcccCCCCeEEEEcC
Q psy2951 1141 KIISDS--ELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESNVVVIGS 1213 (1466)
Q Consensus 1141 ~v~~i~--d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~-----~v~~~~~~~~~~~l~~~~~~~~~vvVvG~ 1213 (1466)
+..+. +...+++.+.+|.++.||+||||||++|+.|++| |.+ ++++.. ..+. ....+++++|||+
T Consensus 83 -~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p~i~-G~~~~~~~~v~~~~-~~~~-----~~~~~~~~~VIgg 154 (304)
T 4fk1_A 83 -VVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEFPSIP-NVREYYGKSLFSCP-YCDG-----WELKDQPLIIISE 154 (304)
T ss_dssp -EEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEECCSCT-THHHHBTTTEESCH-HHHS-----GGGTTSCEEEECC
T ss_pred -EEEeeecCCCcEEEEECCCCEEEeCEEEEccCCcccccccc-Cccccccceeeecc-ccch-----hHhcCCceeeecC
Confidence 55551 2234578889999999999999999999999999 865 344332 1111 1223677888887
Q ss_pred CH-HHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCee
Q psy2951 1214 SF-IGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTI 1292 (1466)
Q Consensus 1214 g~-~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i 1292 (1466)
|. .++|+|..+++.+.+|+++.+.+... +.+.+.+++.|+.++.+. ++.+. .+++++..|++++|+++
T Consensus 155 G~~~~~e~a~~~~~~~~~v~i~~~~~~~~---------~~~~~~l~~~g~~~~~~~-v~~~~-~~~~~~~~v~~~~g~~i 223 (304)
T 4fk1_A 155 NEDHTLHMTKLVYNWSTDLVIATNGNELS---------QTIMDELSNKNIPVITES-IRTLQ-GEGGYLKKVEFHSGLRI 223 (304)
T ss_dssp SHHHHHHHHHHHTTTCSCEEEECSSCCCC---------HHHHHHHHTTTCCEECSC-EEEEE-SGGGCCCEEEETTSCEE
T ss_pred CCchhhhHHHHHHhCCceEEEEeccccch---------hhhhhhhhccceeEeeee-EEEee-cCCCeeeeeecccccee
Confidence 75 56899999999999999998876433 234566888999998764 77787 56667788999999999
Q ss_pred ecCEEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHH
Q psy2951 1293 PADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAAL 1372 (1466)
Q Consensus 1293 ~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~ 1372 (1466)
++|.+++++|..|+.+++++.|++++.+|+|.||+++|||.|+|||+|||+..+.. ++..|..||+.||.
T Consensus 224 ~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~vd~~~~Ts~p~IyA~GDv~~~~~~----------~~~~A~~~G~~AA~ 293 (304)
T 4fk1_A 224 ERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGRTSEKNIYLAGETTTQGPS----------SLIIAASQGNKAAI 293 (304)
T ss_dssp CCCEEEECCEEECSSCHHHHTTCCCCTTSSSCSSTTCBCSSTTEEECSHHHHTSCC----------CHHHHHHHHHHHHH
T ss_pred eecceeeeeccccCChhhhhcCeEECCCCCEEECcCCccCCCCEEEEeccCCCcch----------HHHHHHHHHHHHHH
Confidence 99999998888888788999999999999999999999999999999999975432 13679999999998
Q ss_pred Hhc
Q psy2951 1373 NMV 1375 (1466)
Q Consensus 1373 ~i~ 1375 (1466)
+|.
T Consensus 294 ~i~ 296 (304)
T 4fk1_A 294 AIN 296 (304)
T ss_dssp HHH
T ss_pred HHH
Confidence 774
No 142
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.96 E-value=1.8e-29 Score=296.96 Aligned_cols=288 Identities=18% Similarity=0.225 Sum_probs=210.1
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcC----CCCCCCCCCccc---h--hc--ccCcccccccCHhHhhhCCc
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITD----ENFLPYDRVKLS---K--QL--DIKADSILLRTEEFYKDNDI 663 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~----~~~~~~~~~~~~---~--~~--~~~~~~~~~~~~~~~~~~gv 663 (1466)
.++|+||||||||+++|+.|++.|++ |+++|+ ....+....... . .+ .....++...+.+.+.+.++
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~--v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv 85 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELK--PLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGT 85 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC--CEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCe--EEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCC
Confidence 47999999999999999999999988 777777 222221110000 0 00 01223445555667778899
Q ss_pred EEEEceEEEEeccccc--cEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCCc---EEEecCHHHHHhhcccC--CCCCc
Q psy2951 664 HVIKGKKIISDSELNE--KKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNK---VFYLRTVEDANNIAPHI--TPESN 736 (1466)
Q Consensus 664 ~~~~~~~v~~i~~~~~--~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~--~~~~~ 736 (1466)
+++.++ |..+ +... ..+.+ ++.++.||+||+|||+.|..|+++ |.+. .+....+..+..+.... ..+++
T Consensus 86 ~~~~~~-v~~i-~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (333)
T 1vdc_A 86 TIFTET-VTKV-DFSSKPFKLFT-DSKAILADAVILAIGAVAKRLSFV-GSGEVLGGFWNRGISACAVCDGAAPIFRNKP 161 (333)
T ss_dssp EEECCC-CCEE-ECSSSSEEEEC-SSEEEEEEEEEECCCEEECCCCCB-TCSSSSSCCBTTTEESCHHHHTTSGGGTTSE
T ss_pred EEEEeE-EEEE-EEcCCEEEEEE-CCcEEEcCEEEECCCCCcCCCCCC-CccccccccccCcEEEeccCccchhhcCCCe
Confidence 999998 8777 4433 36666 678899999999999999988888 7542 12111111111112222 45899
Q ss_pred EEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCC-ceEEEEC
Q psy2951 737 VVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKN-DVTAANL 815 (1466)
Q Consensus 737 vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~-~~~~v~~ 815 (1466)
|+|||+|.+|+|+|..|++.+.+|+++++.+.+.. .+.+ ..+.+++.||+++++++++++..++++ ++..+.+
T Consensus 162 v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---~~~~---~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~ 235 (333)
T 1vdc_A 162 LAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA---SKIM---QQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKV 235 (333)
T ss_dssp EEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHHH---HHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEE
T ss_pred EEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc---cHHH---HHHHHhCCCeeEecCCceEEEeCCCCccceeeEEE
Confidence 99999999999999999999999999999876532 2221 224456789999999999999844321 4444554
Q ss_pred C---CC--cEEecCEEEEccccccCccccccCCceeeCCCcEEeCCC-CCCCCCCeEEeccccccCCcccCCceeeeccH
Q psy2951 816 D---NG--TTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEY-LETNVPGVYAGGDIAYAPLHSFYNKNASIGHY 889 (1466)
Q Consensus 816 ~---~g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~-~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~ 889 (1466)
. +| +++++|.||+|+|++|++++++ .+++++++|+|.+|++ ++|+.|+|||+|||+..+. ..+
T Consensus 236 ~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~----------~~~ 304 (333)
T 1vdc_A 236 KNVVTGDVSDLKVSGLFFAIGHEPATKFLD-GGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKY----------RQA 304 (333)
T ss_dssp EETTTCCEEEEECSEEEECSCEEESCGGGT-TSSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSC----------CCH
T ss_pred EecCCCceEEEecCEEEEEeCCccchHHhh-ccccccCCCCEEechhhcccCCCCEEEeeeccCCCc----------hhH
Confidence 3 44 5799999999999999998887 4788888899999987 6899999999999998642 145
Q ss_pred HHHHHHHHHHHHHhcc
Q psy2951 890 QLAQYHGRIAALNMVE 905 (1466)
Q Consensus 890 ~~A~~~g~~aA~~i~~ 905 (1466)
..|..||+.||.+|..
T Consensus 305 ~~A~~~g~~aa~~i~~ 320 (333)
T 1vdc_A 305 ITAAGTGCMAALDAEH 320 (333)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHH
Confidence 7899999999999974
No 143
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.96 E-value=2.2e-29 Score=311.44 Aligned_cols=283 Identities=22% Similarity=0.314 Sum_probs=217.9
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCC---ccchhc---ccCcccccccCHhHhhhCCcEE
Q psy2951 592 SGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRV---KLSKQL---DIKADSILLRTEEFYKDNDIHV 665 (1466)
Q Consensus 592 ~~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~gv~~ 665 (1466)
....+||+||||||||++||..|++.|++ ++++++.. ++... ...... .....++...+.+.+++.|+++
T Consensus 209 ~~~~~dVvIIGgG~AGl~aA~~la~~G~~--v~lie~~~--GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v 284 (521)
T 1hyu_A 209 KRDAYDVLIVGSGPAGAAAAVYSARKGIR--TGLMGERF--GGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDV 284 (521)
T ss_dssp TSCCEEEEEECCSHHHHHHHHHHHHTTCC--EEEECSST--TGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEE
T ss_pred ccCcccEEEECCcHHHHHHHHHHHhCCCe--EEEEECCC--CCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEE
Confidence 34578999999999999999999999988 67776531 11110 011011 1223345555666777889999
Q ss_pred EEceEEEEecccc-----ccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCC-----cEEEecCHHHHHhhcccCCCCC
Q psy2951 666 IKGKKIISDSELN-----EKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPES 735 (1466)
Q Consensus 666 ~~~~~v~~i~~~~-----~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~ 735 (1466)
+.+++|..+ +.. .+.+.+.++.++.||+||+|||+.|+.|++| |.+ .+++... +......++
T Consensus 285 ~~~~~v~~i-~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ip-G~~~~~~~~v~~~~~------~~~~~~~~k 356 (521)
T 1hyu_A 285 IDSQSASKL-VPAATEGGLHQIETASGAVLKARSIIIATGAKWRNMNVP-GEDQYRTKGVTYCPH------CDGPLFKGK 356 (521)
T ss_dssp ECSCCEEEE-ECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCT-TTTTTTTTTEECCTT------CCGGGGBTS
T ss_pred EcCCEEEEE-EeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCCCCC-ChhhhcCceEEEeec------CchhhcCCC
Confidence 999889888 432 4678888888999999999999999988888 764 2332211 122233589
Q ss_pred cEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHh-cCcEEEccceEEEEEecCCCceEEEE
Q psy2951 736 NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFES-KGVKFVMKANVSSFEKNEKNDVTAAN 814 (1466)
Q Consensus 736 ~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~-~gv~~~~~~~v~~i~~~~~~~~~~v~ 814 (1466)
+|+|||+|++|+|+|..|++.+.+|+++++.+.+.. + ..+.+.+++ .||+++++++++++.. +++++..+.
T Consensus 357 ~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~---~----~~l~~~l~~~~gV~v~~~~~v~~i~~-~~~~v~~v~ 428 (521)
T 1hyu_A 357 RVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---D----QVLQDKVRSLKNVDIILNAQTTEVKG-DGSKVVGLE 428 (521)
T ss_dssp EEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS---C----HHHHHHHTTCTTEEEECSEEEEEEEE-CSSSEEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc---C----HHHHHHHhcCCCcEEEeCCEEEEEEc-CCCcEEEEE
Confidence 999999999999999999999999999999886542 2 345666777 6999999999999984 344555555
Q ss_pred CC---CCc--EEecCEEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccH
Q psy2951 815 LD---NGT--TIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHY 889 (1466)
Q Consensus 815 ~~---~g~--~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~ 889 (1466)
+. +|+ ++++|.|++++|++|++++++. .++++++|+|.||++++|+.|+|||+|||+..+.. .+
T Consensus 429 ~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~-~l~~~~~G~I~Vd~~~~ts~p~VfA~GD~~~~~~~----------~~ 497 (521)
T 1hyu_A 429 YRDRVSGDIHSVALAGIFVQIGLLPNTHWLEG-ALERNRMGEIIIDAKCETSVKGVFAAGDCTTVPYK----------QI 497 (521)
T ss_dssp EEETTTCCEEEEECSEEEECCCEEESCGGGTT-TSCBCTTSCBCCCTTCBCSSTTEEECSTTBCCSSC----------CH
T ss_pred EEeCCCCceEEEEcCEEEECcCCCCCchHHhh-hhccCCCCcEEeCCCCCCCCCCEEEeecccCCCcc----------ee
Confidence 54 353 6899999999999999998876 48888899999999999999999999999987532 35
Q ss_pred HHHHHHHHHHHHHhcc
Q psy2951 890 QLAQYHGRIAALNMVE 905 (1466)
Q Consensus 890 ~~A~~~g~~aA~~i~~ 905 (1466)
..|+.||+.||.+|+.
T Consensus 498 ~~A~~~g~~aa~~i~~ 513 (521)
T 1hyu_A 498 IIATGEGAKASLSAFD 513 (521)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred eehHHhHHHHHHHHHH
Confidence 7899999999999864
No 144
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.96 E-value=2.6e-29 Score=293.46 Aligned_cols=283 Identities=18% Similarity=0.204 Sum_probs=211.2
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEE-EcCCCCCCCCC---CCCchhh----ccCcccccccChhhhccCCcEE
Q psy2951 1065 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYF-ITDENFLPYDR---VKLSKQL----DIKADSILLRTEEFYKDNDIHV 1136 (1466)
Q Consensus 1065 ~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~l-i~~~~~~~~~~---~~l~~~~----~~~~~~~~~~~~~~~~~~~v~~ 1136 (1466)
.+++|+|||||+||++||..|++.|+ +|+| +|++. ++... ..+.... .....++.....+++++.++++
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~--~v~li~e~~~-~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 79 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGL--KNVVMFEKGM-PGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKH 79 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTC--SCEEEECSSS-TTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCC--CeEEEEeCCC-CCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEE
Confidence 35789999999999999999999998 8999 99842 22110 0000000 0112223333345677789999
Q ss_pred EcCCeEEEeecCC---CCeEEecCCcEEecCeEEEecCCCCCcCCCCCCCC-----cEEEecCHHHHHhhhcccCCCCeE
Q psy2951 1137 IKGKKIISDSELN---EKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESNV 1208 (1466)
Q Consensus 1137 ~~~~~v~~i~d~~---~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~-----~v~~~~~~~~~~~l~~~~~~~~~v 1208 (1466)
+.+ +|..+ ... ...+.+..+.++.||+||+|||+.|+.+++| |.+ .++..... ......++++
T Consensus 80 ~~~-~v~~i-~~~~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~-g~~~~~~~~~~~~~~~------~~~~~~~~~v 150 (315)
T 3r9u_A 80 EMV-GVEQI-LKNSDGSFTIKLEGGKTELAKAVIVCTGSAPKKAGFK-GEDEFFGKGVSTCATC------DGFFYKNKEV 150 (315)
T ss_dssp ECC-CEEEE-EECTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCB-TTTTTBTTTEESCHHH------HGGGGTTSEE
T ss_pred EEE-EEEEE-ecCCCCcEEEEEecCCEEEeCEEEEeeCCCCCCCCCC-ChhhcCCCeEEeeecc------cccccCcCEE
Confidence 988 57776 322 2232143222899999999999999999888 765 34433211 1222347999
Q ss_pred EEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcC-
Q psy2951 1209 VVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLD- 1287 (1466)
Q Consensus 1209 vVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~- 1287 (1466)
+|||+|.+|+|+|..|++.+.+|+++++.+.+.. .+ +.+.+.+++.||++++++.+.++. .+++++..|.+.
T Consensus 151 ~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~---~~~~~~~~~~gv~~~~~~~v~~i~-~~~~~~~~v~~~~ 223 (315)
T 3r9u_A 151 AVLGGGDTALEEALYLANICSKIYLIHRRDEFRA---AP---STVEKVKKNEKIELITSASVDEVY-GDKMGVAGVKVKL 223 (315)
T ss_dssp EEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS---CH---HHHHHHHHCTTEEEECSCEEEEEE-EETTEEEEEEEEC
T ss_pred EEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC---CH---HHHHHHHhcCCeEEEeCcEEEEEE-cCCCcEEEEEEEc
Confidence 9999999999999999999999999999876532 22 334556678999999999999998 455566666665
Q ss_pred -CCC--eeecCEEEEeeccccCcccccc---CC-ceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecH
Q psy2951 1288 -NGT--TIPADLVIVGIGTVLNTNYLDG---KG-VELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHY 1360 (1466)
Q Consensus 1288 -~g~--~i~~D~vv~a~G~~p~~~~~~~---~g-l~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~ 1360 (1466)
+|+ ++++|.||+++|..|++++++. .| +.++.+|+|.||++++|+.|+|||+|||+..+. ..+
T Consensus 224 ~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t~~~~v~a~GD~~~~~~----------~~~ 293 (315)
T 3r9u_A 224 KDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFAAGDLRKDAP----------KQV 293 (315)
T ss_dssp TTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECGGGBTTCC----------CCH
T ss_pred CCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCcccCCCCEEEeecccCCch----------hhh
Confidence 886 7899999999999999998876 55 888888999999999999999999999986432 134
Q ss_pred HHHHHHHHHHHHHhcC
Q psy2951 1361 QLAQYHGRIAALNMVE 1376 (1466)
Q Consensus 1361 ~~A~~qa~~aa~~i~g 1376 (1466)
..|..||+.||.+|+.
T Consensus 294 ~~A~~~g~~aa~~i~~ 309 (315)
T 3r9u_A 294 ICAAGDGAVAALSAMA 309 (315)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hhHHhhHHHHHHHHHH
Confidence 8899999999999873
No 145
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.96 E-value=3.3e-30 Score=311.06 Aligned_cols=331 Identities=20% Similarity=0.194 Sum_probs=226.5
Q ss_pred CCCCeeecC--CCCCCCCeEEEEEEcCeEEEEEcccchhccc---cccccccccCCCCCCeEEEEcCchHHHHHHHHHHH
Q psy2951 542 IATGDIEDF--PGMDSLPCYKVTIQNDDSVVVQARKDELKNK---KRKLPMAKLSSGNKDTFIVVGGGPSGATCVETLRQ 616 (1466)
Q Consensus 542 ~~~G~~~~~--p~~~~l~~~~v~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~vvVIGgG~AGl~aA~~l~~ 616 (1466)
.-+|++|.. ||...+..-. ..++.+.+...++.+.+. ..+.+...+.....++|+|||||||||+||+.|++
T Consensus 67 ~~~grvCp~~~~Ce~~C~~~~---~~~~~v~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~V~IIGgGpAGl~aA~~L~~ 143 (456)
T 2vdc_G 67 EICGRICPQDRLCEGNCVIEQ---STHGAVTIGSVEKYINDTAWDQGWVKPRTPSRELGLSVGVIGAGPAGLAAAEELRA 143 (456)
T ss_dssp HHHHHHCCGGGSGGGGCGGGG---SSSCSCCHHHHHHHHHHHHHHHTCCCCCCSCSSCCCCEEEECCSHHHHHHHHHHHH
T ss_pred ccccccCCCCcchHHhcccCC---CCCCCccHHHHHHHHHHHHHHcCCCCCCCCcCCCCCEEEEECCCHHHHHHHHHHHH
Confidence 345777777 7875322110 013334344444433322 12332222233567899999999999999999999
Q ss_pred cCCCccEEEEcCCCCCCCCCCccchhcccCcccccccCHhHhhhCCcEEEEceEEEEeccccccEEEccCCCEEecCEEE
Q psy2951 617 NGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIY 696 (1466)
Q Consensus 617 ~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~v~~~~~~~~~~d~lv 696 (1466)
+|++ |+++|+.+.+++....-...+ ....++..+..+++++.|+++++++.+. +.+++++. .+.||+||
T Consensus 144 ~G~~--V~v~e~~~~~GG~l~~gip~~-~~~~~~~~~~~~~l~~~gv~~~~~~~v~-------~~v~~~~~-~~~~d~vv 212 (456)
T 2vdc_G 144 KGYE--VHVYDRYDRMGGLLVYGIPGF-KLEKSVVERRVKLLADAGVIYHPNFEVG-------RDASLPEL-RRKHVAVL 212 (456)
T ss_dssp HTCC--EEEECSSSSCSTHHHHTSCTT-TSCHHHHHHHHHHHHHTTCEEETTCCBT-------TTBCHHHH-HSSCSEEE
T ss_pred CCCe--EEEEeccCCCCCeeeecCCCc-cCCHHHHHHHHHHHHHCCcEEEeCCEec-------cEEEhhHh-HhhCCEEE
Confidence 9987 889998865542211000000 1223455666778888999999998542 11222222 35799999
Q ss_pred EcCCCC-CCcCCCCCCCC--cEEEecCHHHHHh---hcc---------cCCCCCcEEEECCChHHHHHHHHHhccCC-eE
Q psy2951 697 LATGSS-PRTISQADGVN--KVFYLRTVEDANN---IAP---------HITPESNVVVIGSSFIGMEAAAFCASKVK-SV 760 (1466)
Q Consensus 697 iAtG~~-~~~~~~~~g~~--~~~~~~~~~~~~~---~~~---------~~~~~~~vvVvG~G~~g~e~A~~l~~~g~-~V 760 (1466)
||||+. |+.++++ |.+ +++....+..... +.. ....+|+|+|||+|++|+|+|..+.+.|. +|
T Consensus 213 lAtG~~~~~~~~ip-G~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~V 291 (456)
T 2vdc_G 213 VATGVYKARDIKAP-GSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSV 291 (456)
T ss_dssp ECCCCCEECCTTCS-CCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEE
T ss_pred EecCCCCCCCCCCC-CCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEE
Confidence 999986 7788888 765 5655333222111 111 11458999999999999999999999987 59
Q ss_pred EEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEEC---------C---------CC--cE
Q psy2951 761 TVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANL---------D---------NG--TT 820 (1466)
Q Consensus 761 ~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~---------~---------~g--~~ 820 (1466)
++++|.+....+..+.+ .+.+++.||+++++..+++|.. ++++..+.+ . +| .+
T Consensus 292 tiv~r~~~~~~p~~~~e-----~~~~~~~Gv~~~~~~~~~~i~~--~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~ 364 (456)
T 2vdc_G 292 KCLYRRDRKNMPGSQRE-----VAHAEEEGVEFIWQAAPEGFTG--DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFT 364 (456)
T ss_dssp EEECSSCSTTCSSCHHH-----HHHHHHTTCEEECCSSSCCEEE--EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEE
T ss_pred EEEEeCCccCCCCCHHH-----HHHHHHCCCEEEeCCCceEEeC--CCcEEEEEEEEEEecccCCcCCccccccCCcEEE
Confidence 99999886522333332 3457788999999999988873 232211111 1 22 47
Q ss_pred EecCEEEEccccccCcc--ccccCCceeeCCCcEEeCCC-CCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHH
Q psy2951 821 IPADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEY-LETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGR 897 (1466)
Q Consensus 821 i~~D~vi~a~G~~p~~~--~~~~~gl~~~~~G~i~vd~~-~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~ 897 (1466)
+++|+||+|+|+.|++. +++..+++++++|+|.+|++ ++|+.|+|||+|||+..+. ++..|+.||+
T Consensus 365 i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~~-----------~v~~A~~~G~ 433 (456)
T 2vdc_G 365 VQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGAS-----------LVVWAIRDGR 433 (456)
T ss_dssp EECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSCC-----------SHHHHHHHHH
T ss_pred EECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcCCCCCEEEeccccCCch-----------HHHHHHHHHH
Confidence 99999999999999875 78888999999999999987 9999999999999987654 3479999999
Q ss_pred HHHHHhcc
Q psy2951 898 IAALNMVE 905 (1466)
Q Consensus 898 ~aA~~i~~ 905 (1466)
.||.+|..
T Consensus 434 ~aA~~i~~ 441 (456)
T 2vdc_G 434 DAAEGIHA 441 (456)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999974
No 146
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.96 E-value=2.1e-29 Score=296.11 Aligned_cols=281 Identities=20% Similarity=0.261 Sum_probs=209.8
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCcc---ch--hc--ccCcccccccCHhHhhhCCcEE
Q psy2951 593 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKL---SK--QL--DIKADSILLRTEEFYKDNDIHV 665 (1466)
Q Consensus 593 ~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~---~~--~~--~~~~~~~~~~~~~~~~~~gv~~ 665 (1466)
...+||+||||||||+++|+.|++.|++ |+++|+.. .++..... .. .+ .....++..++.+.+.+.++++
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~--v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~ 88 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLA--PLVFEGTS-FGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADL 88 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCC--CEEECCSS-CSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEE
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCe--EEEEecCC-CCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEE
Confidence 3468999999999999999999999988 67777642 11110000 00 01 1223345556666777889999
Q ss_pred EEceEEEEeccc-cccEE-EccCCCEEecCEEEEcCCCCCCcCCCCCCCC-----cEEEecCHHHHHhhcccCCCCCcEE
Q psy2951 666 IKGKKIISDSEL-NEKKI-KLQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESNVV 738 (1466)
Q Consensus 666 ~~~~~v~~i~~~-~~~~v-~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~vv 738 (1466)
+.++ |..+ +. ....+ .++++.++.||+||+|||+.|..|+++ |.+ .++.. .... ..+..+++|+
T Consensus 89 ~~~~-v~~i-~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~~~~i~-g~~~~~~~~~~~~---~~~~---~~~~~~~~v~ 159 (335)
T 2a87_A 89 RMED-VESV-SLHGPLKSVVTADGQTHRARAVILAMGAAARYLQVP-GEQELLGRGVSSC---ATCD---GFFFRDQDIA 159 (335)
T ss_dssp ECCC-EEEE-ECSSSSEEEEETTSCEEEEEEEEECCCEEECCCCCT-HHHHTBTTTEESC---HHHH---GGGGTTCEEE
T ss_pred EEee-EEEE-EeCCcEEEEEeCCCCEEEeCEEEECCCCCccCCCCC-chHhccCCceEEe---eccc---hhhcCCCEEE
Confidence 9998 8888 44 33467 777788999999999999999988888 653 12221 1211 2234589999
Q ss_pred EECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHH-HHHHhcCcEEEccceEEEEEecCCCceEEEECC-
Q psy2951 739 VIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERIT-KLFESKGVKFVMKANVSSFEKNEKNDVTAANLD- 816 (1466)
Q Consensus 739 VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~-~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~- 816 (1466)
|||+|++|+|+|..|++.+.+|+++++.+.+.. . +.+. +.+++.||++++++++++++.++ ++..+.+.
T Consensus 160 ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~---~----~~~~~~~~~~~gV~v~~~~~v~~i~~~~--~~~~v~~~~ 230 (335)
T 2a87_A 160 VIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA---S----KIMLDRARNNDKIRFLTNHTVVAVDGDT--TVTGLRVRD 230 (335)
T ss_dssp EECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS---C----TTHHHHHHHCTTEEEECSEEEEEEECSS--SCCEEEEEE
T ss_pred EECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc---c----HHHHHHHhccCCcEEEeCceeEEEecCC--cEeEEEEEE
Confidence 999999999999999999999999999876532 1 1222 44567899999999999998432 33233332
Q ss_pred --CC--cEEecCEEEEccccccCccccccCCceeeCCCcEEeCCC-CCCCCCCeEEeccccccCCcccCCceeeeccHHH
Q psy2951 817 --NG--TTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEY-LETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQL 891 (1466)
Q Consensus 817 --~g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~-~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~ 891 (1466)
+| +++++|.||+|+|++|++++++ .+++++++|+|.+|++ ++|+.|+|||+|||+..+. ..+..
T Consensus 231 ~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~----------~~~~~ 299 (335)
T 2a87_A 231 TNTGAETTLPVTGVFVAIGHEPRSGLVR-EAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTY----------RQAVT 299 (335)
T ss_dssp ETTSCCEEECCSCEEECSCEEECCTTTB-TTBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSC----------CCHHH
T ss_pred cCCCceEEeecCEEEEccCCccChhHhh-cccccCCCccEEeCCCCCccCCCCEEEeeecCCccH----------HHHHH
Confidence 34 5799999999999999998887 5788888999999986 6899999999999997642 14578
Q ss_pred HHHHHHHHHHHhcc
Q psy2951 892 AQYHGRIAALNMVE 905 (1466)
Q Consensus 892 A~~~g~~aA~~i~~ 905 (1466)
|..||+.||.+|..
T Consensus 300 A~~~g~~aA~~i~~ 313 (335)
T 2a87_A 300 AAGSGCAAAIDAER 313 (335)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHH
Confidence 99999999999864
No 147
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.96 E-value=6.2e-29 Score=292.39 Aligned_cols=285 Identities=19% Similarity=0.233 Sum_probs=210.0
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcC----CCCCCCC---------CCCCchhhccCcccccccChhhhccC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITD----ENFLPYD---------RVKLSKQLDIKADSILLRTEEFYKDN 1132 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~----~~~~~~~---------~~~l~~~~~~~~~~~~~~~~~~~~~~ 1132 (1466)
+++|+|||||++|+++|..|++.|. +|+|||+ ....+.. .+.++..+ ....+.....+++.+.
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~--~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~ 83 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAEL--KPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGI--LGVELTDKFRKQSERF 83 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC--CCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCE--EHHHHHHHHHHHHHHT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC--eEEEEeccCccccCCCceeeeccccccCCCCccCC--CHHHHHHHHHHHHHHC
Confidence 3689999999999999999999998 9999998 2222110 11111000 1111222223456667
Q ss_pred CcEEEcCCeEEEeecCCCC--eEEecCCcEEecCeEEEecCCCCCcCCCCCCCCc---EEEecCHHHHHhhhccc--CCC
Q psy2951 1133 DIHVIKGKKIISDSELNEK--KIKLQDGTSIDFTKIYLATGSSPRTISQADGVNK---VFYLRTVEDANNIAPHI--TPE 1205 (1466)
Q Consensus 1133 ~v~~~~~~~v~~i~d~~~~--~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~~---v~~~~~~~~~~~l~~~~--~~~ 1205 (1466)
+++++.++ |..+ +...+ +|.+ ++.++.||+||+|||+.|+.+++| |.+. ++..+....+..+...+ ..+
T Consensus 84 gv~~~~~~-v~~i-~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (333)
T 1vdc_A 84 GTTIFTET-VTKV-DFSSKPFKLFT-DSKAILADAVILAIGAVAKRLSFV-GSGEVLGGFWNRGISACAVCDGAAPIFRN 159 (333)
T ss_dssp TCEEECCC-CCEE-ECSSSSEEEEC-SSEEEEEEEEEECCCEEECCCCCB-TCSSSSSCCBTTTEESCHHHHTTSGGGTT
T ss_pred CCEEEEeE-EEEE-EEcCCEEEEEE-CCcEEEcCEEEECCCCCcCCCCCC-CccccccccccCcEEEeccCccchhhcCC
Confidence 99999987 9999 87655 5666 778899999999999999988888 7542 12111111111112222 458
Q ss_pred CeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCC--cEEE
Q psy2951 1206 SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKN--DVTA 1283 (1466)
Q Consensus 1206 ~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g--~~~~ 1283 (1466)
++|+|||+|.+|+|+|..|++.|.+|+++++.+.+.. .+. ...+.+++.||+++++++++++. .+++ ++..
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---~~~---~~~~~~~~~gv~i~~~~~v~~i~-~~~~~~~v~~ 232 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA---SKI---MQQRALSNPKIDVIWNSSVVEAY-GDGERDVLGG 232 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHH---HHHHHHTCTTEEEECSEEEEEEE-ESSSSSSEEE
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc---cHH---HHHHHHhCCCeeEecCCceEEEe-CCCCccceee
Confidence 9999999999999999999999999999999875532 122 12345678999999999999998 3433 5555
Q ss_pred EEcC---CC--CeeecCEEEEeeccccCccccccCCceeeCCCeEEeCCC-ccccCCCEEEecccccCCCccCCCceeee
Q psy2951 1284 ANLD---NG--TTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEY-LETNVPGVYAGGDIAYAPLHSFYNKNASI 1357 (1466)
Q Consensus 1284 v~l~---~g--~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~-~~t~~~~v~a~GD~a~~p~~~~~~~~~~~ 1357 (1466)
|.+. +| +++++|.||+++|..|++++++ .++.++.+|+|.||++ ++|+.|+|||+|||+..+..
T Consensus 233 v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~--------- 302 (333)
T 1vdc_A 233 LKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLD-GGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYR--------- 302 (333)
T ss_dssp EEEEETTTCCEEEEECSEEEECSCEEESCGGGT-TSSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCC---------
T ss_pred EEEEecCCCceEEEecCEEEEEeCCccchHHhh-ccccccCCCCEEechhhcccCCCCEEEeeeccCCCch---------
Confidence 6664 45 5789999999999999999887 5788888899999986 68999999999999987522
Q ss_pred ecHHHHHHHHHHHHHHhcC
Q psy2951 1358 GHYQLAQYHGRIAALNMVE 1376 (1466)
Q Consensus 1358 ~~~~~A~~qa~~aa~~i~g 1376 (1466)
.+..|..||+.||.+|+.
T Consensus 303 -~~~~A~~~g~~aa~~i~~ 320 (333)
T 1vdc_A 303 -QAITAAGTGCMAALDAEH 320 (333)
T ss_dssp -CHHHHHHHHHHHHHHHHH
T ss_pred -hHHHHHHhHHHHHHHHHH
Confidence 247899999999999884
No 148
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.96 E-value=2e-28 Score=302.82 Aligned_cols=284 Identities=22% Similarity=0.326 Sum_probs=218.3
Q ss_pred CCCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCC-CCCCCCCchhhc---cCcccccccChhhhccCCcEEEcC
Q psy2951 1064 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFL-PYDRVKLSKQLD---IKADSILLRTEEFYKDNDIHVIKG 1139 (1466)
Q Consensus 1064 ~~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~-~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~ 1139 (1466)
...++|+|||||+||++||..|++.|. +|+|||+...- .+....+..... .....+.....+.+++++++++.+
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~--~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~ 287 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGI--RTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDS 287 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTC--CEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECS
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCC--eEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcC
Confidence 345789999999999999999999998 99999864210 000011110000 111122222234566789999999
Q ss_pred CeEEEeecCC-----CCeEEecCCcEEecCeEEEecCCCCCcCCCCCCCC-----cEEEecCHHHHHhhhcccCCCCeEE
Q psy2951 1140 KKIISDSELN-----EKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESNVV 1209 (1466)
Q Consensus 1140 ~~v~~i~d~~-----~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~-----~v~~~~~~~~~~~l~~~~~~~~~vv 1209 (1466)
++|+.+ ++. .+.|.+++|.++.||+||+|||+.|+.+++| |.+ ++++....+ .....+++|+
T Consensus 288 ~~v~~i-~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ip-G~~~~~~~~v~~~~~~~------~~~~~~k~V~ 359 (521)
T 1hyu_A 288 QSASKL-VPAATEGGLHQIETASGAVLKARSIIIATGAKWRNMNVP-GEDQYRTKGVTYCPHCD------GPLFKGKRVA 359 (521)
T ss_dssp CCEEEE-ECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCT-TTTTTTTTTEECCTTCC------GGGGBTSEEE
T ss_pred CEEEEE-EeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCCCCC-ChhhhcCceEEEeecCc------hhhcCCCeEE
Confidence 889999 864 4568888898999999999999999988888 764 455543221 1223489999
Q ss_pred EEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHh-CCcEEEcCceEEEEEecCCCcEEEEEcCC
Q psy2951 1210 VIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFES-KGVKFVMKANVSSFEKNEKNDVTAANLDN 1288 (1466)
Q Consensus 1210 VvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~-~gv~~~~~~~v~~i~~~~~g~~~~v~l~~ 1288 (1466)
|||+|++|+|+|..|++.|.+|+++++.+.+.. . ..+.+.+++ .||++++++.++++. .+++++..+.+.+
T Consensus 360 ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~---~----~~l~~~l~~~~gV~v~~~~~v~~i~-~~~~~v~~v~~~~ 431 (521)
T 1hyu_A 360 VIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---D----QVLQDKVRSLKNVDIILNAQTTEVK-GDGSKVVGLEYRD 431 (521)
T ss_dssp EECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS---C----HHHHHHHTTCTTEEEECSEEEEEEE-ECSSSEEEEEEEE
T ss_pred EECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc---C----HHHHHHHhcCCCcEEEeCCEEEEEE-cCCCcEEEEEEEe
Confidence 999999999999999999999999999886553 1 345566666 699999999999998 4555666676653
Q ss_pred ---CC--eeecCEEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHH
Q psy2951 1289 ---GT--TIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLA 1363 (1466)
Q Consensus 1289 ---g~--~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A 1363 (1466)
|+ ++++|.|++++|..|+++|++. .+.++.+|+|.||++++|+.|+|||+|||+..|.. .+..|
T Consensus 432 ~~~g~~~~i~~D~vi~a~G~~pn~~~l~~-~l~~~~~G~I~Vd~~~~ts~p~VfA~GD~~~~~~~----------~~~~A 500 (521)
T 1hyu_A 432 RVSGDIHSVALAGIFVQIGLLPNTHWLEG-ALERNRMGEIIIDAKCETSVKGVFAAGDCTTVPYK----------QIIIA 500 (521)
T ss_dssp TTTCCEEEEECSEEEECCCEEESCGGGTT-TSCBCTTSCBCCCTTCBCSSTTEEECSTTBCCSSC----------CHHHH
T ss_pred CCCCceEEEEcCEEEECcCCCCCchHHhh-hhccCCCCcEEeCCCCCCCCCCEEEeecccCCCcc----------eeeeh
Confidence 54 6899999999999999999886 48888889999999999999999999999987642 23789
Q ss_pred HHHHHHHHHHhcC
Q psy2951 1364 QYHGRIAALNMVE 1376 (1466)
Q Consensus 1364 ~~qa~~aa~~i~g 1376 (1466)
..||+.||.++..
T Consensus 501 ~~~g~~aa~~i~~ 513 (521)
T 1hyu_A 501 TGEGAKASLSAFD 513 (521)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHH
Confidence 9999999999863
No 149
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.96 E-value=8.7e-29 Score=290.78 Aligned_cols=280 Identities=21% Similarity=0.272 Sum_probs=209.7
Q ss_pred CCCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCC---------CCCCchhhccCcccccccChhhhccCCc
Q psy2951 1064 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD---------RVKLSKQLDIKADSILLRTEEFYKDNDI 1134 (1466)
Q Consensus 1064 ~~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~---------~~~l~~~~~~~~~~~~~~~~~~~~~~~v 1134 (1466)
..+++|+|||||+||+++|..|++.|+ +|+|||+.. ++.. .+.+... .....+.....+++.+.++
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~--~v~lie~~~-~gg~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~v 86 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQL--APLVFEGTS-FGGALMTTTDVENYPGFRNG--ITGPELMDEMREQALRFGA 86 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEECCSS-CSCGGGSCSCBCCSTTCTTC--BCHHHHHHHHHHHHHHTTC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCC--eEEEEecCC-CCCceeccchhhhcCCCCCC--CCHHHHHHHHHHHHHHcCC
Confidence 345789999999999999999999998 999999752 1110 0111000 0111222222345566799
Q ss_pred EEEcCCeEEEeecCC-CCeE-EecCCcEEecCeEEEecCCCCCcCCCCCCCC-----cEEEecCHHHHHhhhcccCCCCe
Q psy2951 1135 HVIKGKKIISDSELN-EKKI-KLQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESN 1207 (1466)
Q Consensus 1135 ~~~~~~~v~~i~d~~-~~~v-~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~-----~v~~~~~~~~~~~l~~~~~~~~~ 1207 (1466)
+++.++ |..+ +.. ..+| .++++.++.||+||+|||+.|+.+++| |.+ .++...+.++ .+..+++
T Consensus 87 ~~~~~~-v~~i-~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~~~~i~-g~~~~~~~~~~~~~~~~~------~~~~~~~ 157 (335)
T 2a87_A 87 DLRMED-VESV-SLHGPLKSVVTADGQTHRARAVILAMGAAARYLQVP-GEQELLGRGVSSCATCDG------FFFRDQD 157 (335)
T ss_dssp EEECCC-EEEE-ECSSSSEEEEETTSCEEEEEEEEECCCEEECCCCCT-HHHHTBTTTEESCHHHHG------GGGTTCE
T ss_pred EEEEee-EEEE-EeCCcEEEEEeCCCCEEEeCEEEECCCCCccCCCCC-chHhccCCceEEeeccch------hhcCCCE
Confidence 999998 9999 862 2357 777888999999999999999988888 643 3443332222 2345899
Q ss_pred EEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcC
Q psy2951 1208 VVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLD 1287 (1466)
Q Consensus 1208 vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~ 1287 (1466)
|+|||+|.+|+|+|..|++.|.+|+++++.+.+.. ...+ ..+++++.||++++++++++++ .++ ++..|.+.
T Consensus 158 v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~---~~~~---~~~~~~~~gV~v~~~~~v~~i~-~~~-~~~~v~~~ 229 (335)
T 2a87_A 158 IAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA---SKIM---LDRARNNDKIRFLTNHTVVAVD-GDT-TVTGLRVR 229 (335)
T ss_dssp EEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS---CTTH---HHHHHHCTTEEEECSEEEEEEE-CSS-SCCEEEEE
T ss_pred EEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc---cHHH---HHHHhccCCcEEEeCceeEEEe-cCC-cEeEEEEE
Confidence 99999999999999999999999999999875532 1111 1245578999999999999998 333 43345543
Q ss_pred ---CC--CeeecCEEEEeeccccCccccccCCceeeCCCeEEeCCC-ccccCCCEEEecccccCCCccCCCceeeeecHH
Q psy2951 1288 ---NG--TTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEY-LETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQ 1361 (1466)
Q Consensus 1288 ---~g--~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~-~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~ 1361 (1466)
+| +++++|.||+|+|..|++++++ .++.++.+|+|.||++ ++|+.|+|||+|||+..+.. .+.
T Consensus 230 ~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~----------~~~ 298 (335)
T 2a87_A 230 DTNTGAETTLPVTGVFVAIGHEPRSGLVR-EAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYR----------QAV 298 (335)
T ss_dssp EETTSCCEEECCSCEEECSCEEECCTTTB-TTBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSCC----------CHH
T ss_pred EcCCCceEEeecCEEEEccCCccChhHhh-cccccCCCccEEeCCCCCccCCCCEEEeeecCCccHH----------HHH
Confidence 45 5789999999999999999887 5788888899999985 68999999999999986422 247
Q ss_pred HHHHHHHHHHHHhcC
Q psy2951 1362 LAQYHGRIAALNMVE 1376 (1466)
Q Consensus 1362 ~A~~qa~~aa~~i~g 1376 (1466)
.|..||+.||.+|..
T Consensus 299 ~A~~~g~~aA~~i~~ 313 (335)
T 2a87_A 299 TAAGSGCAAAIDAER 313 (335)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHH
Confidence 899999999999874
No 150
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.96 E-value=5.8e-29 Score=301.98 Aligned_cols=296 Identities=17% Similarity=0.199 Sum_probs=222.4
Q ss_pred CcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc--cCcccccccChhhhccCCcEEEcCCeEEE
Q psy2951 1067 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD--IKADSILLRTEEFYKDNDIHVIKGKKIIS 1144 (1466)
Q Consensus 1067 ~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~v~~ 1144 (1466)
++|||||||+||+++|..|++.+...+|+|||++++++|. +.+..... ...+++.....+++++.+++++.+ +|+.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT-PAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAES 80 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG-GGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC-CCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEE
Confidence 6899999999999999999994333399999999987774 22222111 344555566667778889999986 5999
Q ss_pred eecCCCCeEEecCCcEEecCeEEEecCCCCCcCCCCCCCC-cEEEecCHHHHHhhhcccC---CCCeEEEEcCCHH----
Q psy2951 1145 DSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-KVFYLRTVEDANNIAPHIT---PESNVVVIGSSFI---- 1216 (1466)
Q Consensus 1145 i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~-~v~~~~~~~~~~~l~~~~~---~~~~vvVvG~g~~---- 1216 (1466)
+ ++..+.|.++++.++.||+||+|||++|..+... .. ..+.+.+.+++.++++.+. .+++++|||+|..
T Consensus 81 i-d~~~~~v~~~~g~~i~~d~liiAtG~~~~~pg~~--~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~ 157 (430)
T 3h28_A 81 I-DPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEG--QEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCF 157 (430)
T ss_dssp E-ETTTTEEEETTCCEEECSEEEECCCCEEECCSBT--HHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCC
T ss_pred E-ECCCCEEEECCCcEEECCEEEEcCCcccccCCCC--CcCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcC
Confidence 9 9999999999999999999999999988765221 11 2344567888877765432 2456788888653
Q ss_pred H--HHHH----HHHhcCC----CeEEEEcCCCcCCccccc--HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEE
Q psy2951 1217 G--MEAA----AFCASKV----KSVTVVGRGAVPFQESLG--KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAA 1284 (1466)
Q Consensus 1217 g--~e~a----~~l~~~g----~~v~vv~~~~~~~~~~~~--~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v 1284 (1466)
| +|+| ..++++| .+|+++++.+.+....++ ++..+.+.+.++++||+++++++|++++ . + . +
T Consensus 158 G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~~~~v~~v~-~-~-~---v 231 (430)
T 3h28_A 158 GPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIE-P-D-K---V 231 (430)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEEC-S-S-E---E
T ss_pred cHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEEEeCCEEEEEe-C-C-e---E
Confidence 3 7766 5566677 589999998765321111 3477889999999999999999999997 3 2 1 4
Q ss_pred EcCC----CCeeecCEEEEeeccccCcccccc-CCceeeCCC-eEEeCCCccc-cCCCEEEecccccCCCccCCCcee--
Q psy2951 1285 NLDN----GTTIPADLVIVGIGTVLNTNYLDG-KGVELNGQK-AVVVNEYLET-NVPGVYAGGDIAYAPLHSFYNKNA-- 1355 (1466)
Q Consensus 1285 ~l~~----g~~i~~D~vv~a~G~~p~~~~~~~-~gl~~~~~G-~i~vd~~~~t-~~~~v~a~GD~a~~p~~~~~~~~~-- 1355 (1466)
.+.+ |+++++|.|++++|..|+..+.+. +|+ .+++| +|.||+++|| ++|+|||+|||+..+... +.++
T Consensus 232 ~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~~~~gl-~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~--~~~~~~ 308 (430)
T 3h28_A 232 IYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKV-ANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIE--KTPIPT 308 (430)
T ss_dssp EEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTT-BCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSS--CCSSCC
T ss_pred EEEecCCCceEEeeeEEEECCCCccchhHhhccccC-cCCCCCEEecCccccCCCCCCEEEEEeeeccCCcc--CCCCCC
Confidence 4444 778999999999999988544333 688 67788 9999999999 799999999999976531 2221
Q ss_pred -eeecHHHHHHHHHHHHHHhcC
Q psy2951 1356 -SIGHYQLAQYHGRIAALNMVE 1376 (1466)
Q Consensus 1356 -~~~~~~~A~~qa~~aa~~i~g 1376 (1466)
...+...|..||+.||+||+.
T Consensus 309 ~~pk~~~~A~~~g~~aa~ni~~ 330 (430)
T 3h28_A 309 GVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHH
Confidence 123568899999999999985
No 151
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.96 E-value=1.8e-28 Score=293.20 Aligned_cols=292 Identities=13% Similarity=0.151 Sum_probs=211.2
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCC------CCCCCC----CCC-chhhcc------------------
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN------FLPYDR----VKL-SKQLDI------------------ 1116 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~------~~~~~~----~~l-~~~~~~------------------ 1116 (1466)
+++|+|||||+||+++|..|++.|.. +|+|||+++ ..|... +.+ ...+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~-~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGIT-DVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNE 82 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC-CEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCC-cEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccccc
Confidence 35899999999999999999999864 799999986 111110 000 000000
Q ss_pred ---CcccccccChhhhccCCcEEEcCCeEEEeecCC--CCeEEecCCcEEecCeEEEecCCCCCcCCCCCCCCcEEEecC
Q psy2951 1117 ---KADSILLRTEEFYKDNDIHVIKGKKIISDSELN--EKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFYLRT 1191 (1466)
Q Consensus 1117 ---~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~d~~--~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~~v~~~~~ 1191 (1466)
....+......++++.+++++.+++|+++ +.. ...|.+.++ ++.||+||+|||+.++ |.+| + ..+++...
T Consensus 83 ~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i-~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~-p~ip-~-~~~~~~~~ 157 (369)
T 3d1c_A 83 EHISGETYAEYLQVVANHYELNIFENTVVTNI-SADDAYYTIATTTE-TYHADYIFVATGDYNF-PKKP-F-KYGIHYSE 157 (369)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCEEECSCCEEEE-EECSSSEEEEESSC-CEEEEEEEECCCSTTS-BCCC-S-SSCEEGGG
T ss_pred cCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEE-EECCCeEEEEeCCC-EEEeCEEEECCCCCCc-cCCC-C-Cceechhh
Confidence 00000011123445679999999999999 865 346777666 6999999999999765 4566 5 33333322
Q ss_pred HHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcc------cccHHHHHHHHHHHHhCC-cEE
Q psy2951 1192 VEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQE------SLGKEVGERITKLFESKG-VKF 1264 (1466)
Q Consensus 1192 ~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~------~~~~~~~~~l~~~~~~~g-v~~ 1264 (1466)
+.+... .++++|+|||+|.+|+|+|..|++.|.+|+++++.+.++.+ .+++.+.+.+.+.+++.| |++
T Consensus 158 ~~~~~~-----~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~ 232 (369)
T 3d1c_A 158 IEDFDN-----FNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEM 232 (369)
T ss_dssp CSCGGG-----SCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTCCEEE
T ss_pred cCChhh-----cCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEE
Confidence 222111 14789999999999999999999999999999998866532 256777888999999997 999
Q ss_pred EcCceEEEEEecCCCcEEEEEcCCCCeee-cCEEEEeeccccCccccccCCceeeCCCeEEeCCC-ccccCCCEEEeccc
Q psy2951 1265 VMKANVSSFEKNEKNDVTAANLDNGTTIP-ADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEY-LETNVPGVYAGGDI 1342 (1466)
Q Consensus 1265 ~~~~~v~~i~~~~~g~~~~v~l~~g~~i~-~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~-~~t~~~~v~a~GD~ 1342 (1466)
+++.+|.+++ .++ ....|.+.||+++. +|.||+++|+.|+++++..+++. +.+|++.||++ ++|++|+|||+|||
T Consensus 233 ~~~~~v~~i~-~~~-~~~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~~-~~~g~i~v~~~~~~t~~~~v~a~GD~ 309 (369)
T 3d1c_A 233 NVHYTVKDID-FNN-GQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFV-TTNQDIKLTTHDESTRYPNIFMIGAT 309 (369)
T ss_dssp ECSCCEEEEE-EET-TEEEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHSC-CTTSCCCBCTTSBBSSSTTEEECSTT
T ss_pred ecCcEEEEEE-ecC-CceEEEecCCeEeccCCceEEeeccCCccchhhhhhcc-CCCCCEEechhhcccCCCCeEEeccc
Confidence 9999999996 222 33467889998775 69999999999999877766666 67788999965 77889999999999
Q ss_pred ccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCC
Q psy2951 1343 AYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK 1378 (1466)
Q Consensus 1343 a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~ 1378 (1466)
+..+.... ..+..+.+||+++|++|.|..
T Consensus 310 ~~~~~~~~-------~~~~~~~~~a~~~a~~l~~~~ 338 (369)
T 3d1c_A 310 VENDNAKL-------CYIYKFRARFAVLAHLLTQRE 338 (369)
T ss_dssp CCCSSCCC-------CSHHHHGGGHHHHHHHHHHHT
T ss_pred cccCCeeE-------EEEehhhHHHHHHHHHHhccc
Confidence 98876531 234578899999999999854
No 152
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.96 E-value=1.4e-28 Score=298.73 Aligned_cols=299 Identities=16% Similarity=0.181 Sum_probs=220.6
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc-cCcccccccCHhHhhhCCcEEEEceEEEE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD-IKADSILLRTEEFYKDNDIHVIKGKKIIS 673 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 673 (1466)
+++|+|||||+||+++|+.|++.+...+|+++|+++.+.|.......... ...+++...+.+.+++.+++++.++ |+.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~~-v~~ 80 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEK-AES 80 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSC-EEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEEE-EEE
Confidence 37999999999999999999995444559999999876664321111111 4556677777888888999999875 999
Q ss_pred eccccccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCCcEEEecCHHHHHhhcccC---CCCCcEEEECCChHH----
Q psy2951 674 DSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHI---TPESNVVVIGSSFIG---- 746 (1466)
Q Consensus 674 i~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~vvVvG~G~~g---- 746 (1466)
+ +.+.+.+.++++.++.||+||+|||+++..|.+. .........+.+++..+.+.+ .++++++|||+|..+
T Consensus 81 i-d~~~~~v~~~~g~~i~~d~liiAtG~~~~~pg~~-~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G 158 (430)
T 3h28_A 81 I-DPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEG-QEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFG 158 (430)
T ss_dssp E-ETTTTEEEETTCCEEECSEEEECCCCEEECCSBT-HHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCH
T ss_pred E-ECCCCEEEECCCcEEECCEEEEcCCcccccCCCC-CcCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCc
Confidence 9 8888899998888999999999999987766332 101233455666665554322 124567888987643
Q ss_pred --HHHH----HHHhccC----CeEEEEeecCccCc---cccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEE
Q psy2951 747 --MEAA----AFCASKV----KSVTVVGRGAVPFQ---ESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAA 813 (1466)
Q Consensus 747 --~e~A----~~l~~~g----~~V~lv~~~~~~~~---~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v 813 (1466)
+|+| ..+++.| .+|+++++.+.+.. ..+ ++..+.+.+.++++||+++++++|++++.+ .+
T Consensus 159 ~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~-~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~------~v 231 (430)
T 3h28_A 159 PAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGI-GASKRLVEDLFAERNIDWIANVAVKAIEPD------KV 231 (430)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCS-TTHHHHHHHHHHHTTCEEECSCEEEEECSS------EE
T ss_pred HHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcc-hHHHHHHHHHHHHCCCEEEeCCEEEEEeCC------eE
Confidence 7777 5555666 58999998876521 112 346788889999999999999999999832 13
Q ss_pred ECCC----CcEEecCEEEEccccccCcccccc-CCceeeCCC-cEEeCCCCCC-CCCCeEEeccccccCCcccCCce---
Q psy2951 814 NLDN----GTTIPADLVIVGIGTVLNTNYLDG-KGVELNGQK-AVVVNEYLET-NVPGVYAGGDIAYAPLHSFYNKN--- 883 (1466)
Q Consensus 814 ~~~~----g~~i~~D~vi~a~G~~p~~~~~~~-~gl~~~~~G-~i~vd~~~~t-~~~~iya~GD~~~~~~~~~~~~~--- 883 (1466)
.+++ ++++++|.|++++|++|+..+.+. .++ .+++| +|.||+++|| ++|+|||+|||+..+... +.+
T Consensus 232 ~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~~~~gl-~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~--~~~~~~ 308 (430)
T 3h28_A 232 IYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKV-ANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIE--KTPIPT 308 (430)
T ss_dssp EEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTT-BCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSS--CCSSCC
T ss_pred EEEecCCCceEEeeeEEEECCCCccchhHhhccccC-cCCCCCEEecCccccCCCCCCEEEEEeeeccCCcc--CCCCCC
Confidence 3333 678999999999999988544433 577 67889 9999999998 899999999999876421 111
Q ss_pred eeeccHHHHHHHHHHHHHHhccC
Q psy2951 884 ASIGHYQLAQYHGRIAALNMVEK 906 (1466)
Q Consensus 884 ~~~~~~~~A~~~g~~aA~~i~~~ 906 (1466)
..+..++.|..||+.+|+||...
T Consensus 309 ~~pk~~~~A~~~g~~aa~ni~~~ 331 (430)
T 3h28_A 309 GVPKTGMMIEQMAMAVAHNIVND 331 (430)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHH
Confidence 12457789999999999999753
No 153
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.96 E-value=4.4e-29 Score=301.18 Aligned_cols=278 Identities=22% Similarity=0.260 Sum_probs=206.3
Q ss_pred CCCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCC----CCCCCchhhccCcccccccChhhhccCCcEEEcC
Q psy2951 1064 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY----DRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKG 1139 (1466)
Q Consensus 1064 ~~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 1139 (1466)
...++|+|||||+||+++|..|++.|+ +|+|||+++.++. ..|.. .....+..+..+++++.+++++.+
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~--~V~v~e~~~~~GG~l~~gip~~-----~~~~~~~~~~~~~l~~~gv~~~~~ 192 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGY--EVHVYDRYDRMGGLLVYGIPGF-----KLEKSVVERRVKLLADAGVIYHPN 192 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTC--CEEEECSSSSCSTHHHHTSCTT-----TSCHHHHHHHHHHHHHTTCEEETT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC--eEEEEeccCCCCCeeeecCCCc-----cCCHHHHHHHHHHHHHCCcEEEeC
Confidence 456789999999999999999999998 8999999876532 11110 011122223345677889999999
Q ss_pred CeEEEeecCCCCeEEecCCcEEecCeEEEecCCC-CCcCCCCCCCC--cEEEecCHHHHHh---hhc---------ccCC
Q psy2951 1140 KKIISDSELNEKKIKLQDGTSIDFTKIYLATGSS-PRTISQADGVN--KVFYLRTVEDANN---IAP---------HITP 1204 (1466)
Q Consensus 1140 ~~v~~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~-~~~~~~~~g~~--~v~~~~~~~~~~~---l~~---------~~~~ 1204 (1466)
+.| . +.+.++++ .+.||+||||||+. |+.+++| |.+ +++...++-.... +.. ....
T Consensus 193 ~~v----~---~~v~~~~~-~~~~d~vvlAtG~~~~~~~~ip-G~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~ 263 (456)
T 2vdc_G 193 FEV----G---RDASLPEL-RRKHVAVLVATGVYKARDIKAP-GSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAA 263 (456)
T ss_dssp CCB----T---TTBCHHHH-HSSCSEEEECCCCCEECCTTCS-CCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCC
T ss_pred CEe----c---cEEEhhHh-HhhCCEEEEecCCCCCCCCCCC-CCcCCCcEEHHHHHHHhhhhhcccccccccccccccC
Confidence 843 1 22444443 36799999999995 7888888 876 7776432222111 111 1145
Q ss_pred CCeEEEEcCCHHHHHHHHHHhcCCC-eEEEEcCCCcC-CcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEE
Q psy2951 1205 ESNVVVIGSSFIGMEAAAFCASKVK-SVTVVGRGAVP-FQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVT 1282 (1466)
Q Consensus 1205 ~~~vvVvG~g~~g~e~a~~l~~~g~-~v~vv~~~~~~-~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~ 1282 (1466)
+++|+|||+|++|+|+|..+.+.|. +|++++|.+.. ++ ....+ .+.+++.||+++++..++++. . ++++.
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p-~~~~e-----~~~~~~~Gv~~~~~~~~~~i~-~-~g~v~ 335 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMP-GSQRE-----VAHAEEEGVEFIWQAAPEGFT-G-DTVVT 335 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCS-SCHHH-----HHHHHHTTCEEECCSSSCCEE-E-EEEEE
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCC-CCHHH-----HHHHHHCCCEEEeCCCceEEe-C-CCcEE
Confidence 8999999999999999999999987 59999998754 43 22222 245778899999999998887 3 34432
Q ss_pred EEEc---------C---------CC--CeeecCEEEEeeccccCcc--ccccCCceeeCCCeEEeCCC-ccccCCCEEEe
Q psy2951 1283 AANL---------D---------NG--TTIPADLVIVGIGTVLNTN--YLDGKGVELNGQKAVVVNEY-LETNVPGVYAG 1339 (1466)
Q Consensus 1283 ~v~l---------~---------~g--~~i~~D~vv~a~G~~p~~~--~~~~~gl~~~~~G~i~vd~~-~~t~~~~v~a~ 1339 (1466)
.|++ . +| .++++|.||+|+|..|++. +++..|+.++.+|+|.||++ ++|+.|+|||+
T Consensus 336 ~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~ 415 (456)
T 2vdc_G 336 GVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAA 415 (456)
T ss_dssp TTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEEC
T ss_pred EEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcCCCCCEEEe
Confidence 2222 1 23 4789999999999999876 78889999998999999987 99999999999
Q ss_pred cccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcC
Q psy2951 1340 GDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVE 1376 (1466)
Q Consensus 1340 GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g 1376 (1466)
|||+..|.. +..|+.||+.||.+|.+
T Consensus 416 GD~~~g~~~-----------v~~A~~~G~~aA~~i~~ 441 (456)
T 2vdc_G 416 GDIVRGASL-----------VVWAIRDGRDAAEGIHA 441 (456)
T ss_dssp GGGGSSCCS-----------HHHHHHHHHHHHHHHHH
T ss_pred ccccCCchH-----------HHHHHHHHHHHHHHHHH
Confidence 999987654 37899999999999985
No 154
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=3e-28 Score=290.14 Aligned_cols=283 Identities=17% Similarity=0.160 Sum_probs=201.6
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCC--------CCchhh---c---c--------Ccccccc
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRV--------KLSKQL---D---I--------KADSILL 1123 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~--------~l~~~~---~---~--------~~~~~~~ 1123 (1466)
+++|+|||||++|+++|..|++.|+ +|+|||+++.++.... ...... . . ....+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~--~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGL--SYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLA 80 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSC--CEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC--CEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHH
Confidence 3689999999999999999999998 9999999875431100 000000 0 0 0011111
Q ss_pred cChhhhccCCcEEEcCCeEEEeecCCCCe---EEecCCcEEecCeEEEecCC--CCCcCCCCCCCC---c-EEEecCHHH
Q psy2951 1124 RTEEFYKDNDIHVIKGKKIISDSELNEKK---IKLQDGTSIDFTKIYLATGS--SPRTISQADGVN---K-VFYLRTVED 1194 (1466)
Q Consensus 1124 ~~~~~~~~~~v~~~~~~~v~~i~d~~~~~---v~~~~g~~~~yd~lvlAtG~--~~~~~~~~~g~~---~-v~~~~~~~~ 1194 (1466)
...++.++.+++++.+++|+++ +...+. |.++++ ++.||+||+|||. .|+.|+++ |.+ + ......+.+
T Consensus 81 ~l~~~~~~~~~~~~~~~~v~~i-~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~-g~~~~~~~~~~~~~~~~ 157 (357)
T 4a9w_A 81 YLAQYEQKYALPVLRPIRVQRV-SHFGERLRVVARDGR-QWLARAVISATGTWGEAYTPEYQ-GLESFAGIQLHSAHYST 157 (357)
T ss_dssp HHHHHHHHTTCCEECSCCEEEE-EEETTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCCCT-TGGGCCSEEEEGGGCCC
T ss_pred HHHHHHHHcCCEEEcCCEEEEE-EECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCC-CccccCCcEEEeccCCC
Confidence 2224556679999999999999 877665 667777 8999999999995 77778888 765 2 222222222
Q ss_pred HHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCC-cCCcccc-cHHHHHHHHHHHH--------------
Q psy2951 1195 ANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA-VPFQESL-GKEVGERITKLFE-------------- 1258 (1466)
Q Consensus 1195 ~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~-~~~~~~~-~~~~~~~l~~~~~-------------- 1258 (1466)
... ..+++|+|||+|.+|+|+|..|++.+ +|+++.+.+ ..++..+ +..+.+.+.+.++
T Consensus 158 ~~~-----~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (357)
T 4a9w_A 158 PAP-----FAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPGG 231 (357)
T ss_dssp SGG-----GTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC--------------------
T ss_pred hhh-----cCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCccccc
Confidence 211 24799999999999999999999998 699999873 4333222 2333333322222
Q ss_pred --------------hCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCccccccCCceeeCCCeEE
Q psy2951 1259 --------------SKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVV 1324 (1466)
Q Consensus 1259 --------------~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~ 1324 (1466)
+.|+ +.....+++++ . + .+.+.||+++++|+||+++|..|++++++.+|+. +++|+|.
T Consensus 232 ~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~-~-~----~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~-~~~G~i~ 303 (357)
T 4a9w_A 232 FGDIVMVPPVLDARARGV-LAAVPPPARFS-P-T----GMQWADGTERAFDAVIWCTGFRPALSHLKGLDLV-TPQGQVE 303 (357)
T ss_dssp --CBCCCHHHHHHHHTTC-CCEECCCSEEE-T-T----EEECTTSCEEECSEEEECCCBCCCCGGGTTTTCB-CTTSCBC
T ss_pred ccCcccChhHHHHHhcCc-eEEecCcceEe-C-C----eeEECCCCEecCCEEEECCCcCCCCcccCccccc-CCCCCcc
Confidence 4454 55566677776 2 2 3889999999999999999999999999999998 7789999
Q ss_pred eCCC--ccccCCCEEEec--ccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCC
Q psy2951 1325 VNEY--LETNVPGVYAGG--DIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEK 1377 (1466)
Q Consensus 1325 vd~~--~~t~~~~v~a~G--D~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~ 1377 (1466)
||++ ++|+.|+|||+| ||+..+... ...|..||+.||++|+..
T Consensus 304 vd~~~l~~t~~~~vya~Gd~d~~~~~~~~----------~~~A~~~g~~~a~~i~~~ 350 (357)
T 4a9w_A 304 VDGSGLRALAVPSVWLLGYGDWNGMASAT----------LIGVTRYAREAVRQVTAY 350 (357)
T ss_dssp BCTTSCBBSSCTTEEECSSCGGGSTTCSS----------TTTHHHHHHHHHHHHHHH
T ss_pred ccCCcccCCCCCCeEEeccccccccchhh----------hhhhHHHHHHHHHHHHHH
Confidence 9999 899999999999 666532211 156999999999999853
No 155
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=6.2e-28 Score=287.35 Aligned_cols=283 Identities=18% Similarity=0.169 Sum_probs=202.1
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCc------c--ch----hcc----------cCcccccc
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK------L--SK----QLD----------IKADSILL 652 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~------~--~~----~~~----------~~~~~~~~ 652 (1466)
+++|+|||||+||+++|+.|+++|++ |+++|+++.++..... + .. ... ....++..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~--v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLS--YVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLA 80 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCC--EEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCC--EEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHH
Confidence 47999999999999999999999987 8888887654321100 0 00 000 11134455
Q ss_pred cCHhHhhhCCcEEEEceEEEEeccccccE---EEccCCCEEecCEEEEcCC--CCCCcCCCCCCCCc----EEEecCHHH
Q psy2951 653 RTEEFYKDNDIHVIKGKKIISDSELNEKK---IKLQDGTSIDFTKIYLATG--SSPRTISQADGVNK----VFYLRTVED 723 (1466)
Q Consensus 653 ~~~~~~~~~gv~~~~~~~v~~i~~~~~~~---v~~~~~~~~~~d~lviAtG--~~~~~~~~~~g~~~----~~~~~~~~~ 723 (1466)
++.+.+++.+++++++++|+.+ +..... +.+.++ ++.||+||+||| +.|+.|+++ |.+. .+.....
T Consensus 81 ~l~~~~~~~~~~~~~~~~v~~i-~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~-g~~~~~~~~~~~~~~-- 155 (357)
T 4a9w_A 81 YLAQYEQKYALPVLRPIRVQRV-SHFGERLRVVARDGR-QWLARAVISATGTWGEAYTPEYQ-GLESFAGIQLHSAHY-- 155 (357)
T ss_dssp HHHHHHHHTTCCEECSCCEEEE-EEETTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCCCT-TGGGCCSEEEEGGGC--
T ss_pred HHHHHHHHcCCEEEcCCEEEEE-EECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCC-CccccCCcEEEeccC--
Confidence 5566777889999999889988 554443 667666 899999999999 577788888 7651 2221111
Q ss_pred HHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecC-ccCcccc-CHHHHHHHHHHHH--------------
Q psy2951 724 ANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA-VPFQESL-GKEVGERITKLFE-------------- 787 (1466)
Q Consensus 724 ~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~-~~~~~~~-~~~~~~~~~~~l~-------------- 787 (1466)
.......+++|+|||+|++|+|+|..|++.+ +|+++.+.+ ..+.... +..+.+.+.+.+.
T Consensus 156 ---~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (357)
T 4a9w_A 156 ---STPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPGG 231 (357)
T ss_dssp ---CCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC--------------------
T ss_pred ---CChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCccccc
Confidence 1111225899999999999999999999998 699999884 3332221 2333333333222
Q ss_pred --------------hcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccCccccccCCceeeCCCcEE
Q psy2951 788 --------------SKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVV 853 (1466)
Q Consensus 788 --------------~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~ 853 (1466)
+.|+ +.....+.+++.. .+.+++|+++++|.||+|+|++|++++++..++. +++|+|.
T Consensus 232 ~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~~------~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~-~~~G~i~ 303 (357)
T 4a9w_A 232 FGDIVMVPPVLDARARGV-LAAVPPPARFSPT------GMQWADGTERAFDAVIWCTGFRPALSHLKGLDLV-TPQGQVE 303 (357)
T ss_dssp --CBCCCHHHHHHHHTTC-CCEECCCSEEETT------EEECTTSCEEECSEEEECCCBCCCCGGGTTTTCB-CTTSCBC
T ss_pred ccCcccChhHHHHHhcCc-eEEecCcceEeCC------eeEECCCCEecCCEEEECCCcCCCCcccCccccc-CCCCCcc
Confidence 3444 4555666676621 5789999999999999999999999999999998 8889999
Q ss_pred eCCC--CCCCCCCeEEec--cccccCCcccCCceeeeccHHHHHHHHHHHHHHhccC
Q psy2951 854 VNEY--LETNVPGVYAGG--DIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEK 906 (1466)
Q Consensus 854 vd~~--~~t~~~~iya~G--D~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~ 906 (1466)
+|++ ++|+.|+|||+| ||+..... .+..|..||+.+|.+|...
T Consensus 304 vd~~~l~~t~~~~vya~Gd~d~~~~~~~----------~~~~A~~~g~~~a~~i~~~ 350 (357)
T 4a9w_A 304 VDGSGLRALAVPSVWLLGYGDWNGMASA----------TLIGVTRYAREAVRQVTAY 350 (357)
T ss_dssp BCTTSCBBSSCTTEEECSSCGGGSTTCS----------STTTHHHHHHHHHHHHHHH
T ss_pred ccCCcccCCCCCCeEEeccccccccchh----------hhhhhHHHHHHHHHHHHHH
Confidence 9999 899999999999 56552211 2346999999999999754
No 156
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.95 E-value=6.3e-28 Score=288.41 Aligned_cols=291 Identities=13% Similarity=0.139 Sum_probs=209.1
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCC-------CC----Cc-cchhcc------------------
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY-------DR----VK-LSKQLD------------------ 644 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~-------~~----~~-~~~~~~------------------ 644 (1466)
.++|+|||||+||+++|+.|++.|++ +|+++|+++ ++. .. +. ....++
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~-~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGIT-DVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC-CEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCC-cEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhcccccccccccc
Confidence 47999999999999999999999982 389999875 211 00 00 000000
Q ss_pred ---cCcccccccCHhHhhhCCcEEEEceEEEEecccc--ccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCCcEEEec
Q psy2951 645 ---IKADSILLRTEEFYKDNDIHVIKGKKIISDSELN--EKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFYLR 719 (1466)
Q Consensus 645 ---~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~--~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~~~~~~~ 719 (1466)
.....+..++...+++.+++++.+++|..+ +.. ...|.+.++ ++.||+||+|||+.+. |.+| + ...++..
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i-~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~-p~ip-~-~~~~~~~ 156 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYELNIFENTVVTNI-SADDAYYTIATTTE-TYHADYIFVATGDYNF-PKKP-F-KYGIHYS 156 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEE-EECSSSEEEEESSC-CEEEEEEEECCCSTTS-BCCC-S-SSCEEGG
T ss_pred ccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEE-EECCCeEEEEeCCC-EEEeCEEEECCCCCCc-cCCC-C-Cceechh
Confidence 011122233445567789999999889888 543 456766655 6999999999998765 5566 4 3233332
Q ss_pred CHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCcc------ccCHHHHHHHHHHHHhcC-cE
Q psy2951 720 TVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQE------SLGKEVGERITKLFESKG-VK 792 (1466)
Q Consensus 720 ~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~------~~~~~~~~~~~~~l~~~g-v~ 792 (1466)
...+ .. ..++++|+|||+|.+|+|+|..|++.|.+|+++++.+.++.+ .+++...+.+.+.+++.| |+
T Consensus 157 ~~~~---~~--~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~ 231 (369)
T 3d1c_A 157 EIED---FD--NFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIE 231 (369)
T ss_dssp GCSC---GG--GSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTCCEE
T ss_pred hcCC---hh--hcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEE
Confidence 2211 11 124789999999999999999999999999999998865532 245677788889999997 99
Q ss_pred EEccceEEEEEecCCCceEEEECCCCcEEe-cCEEEEccccccCccccccCCceeeCCCcEEeCCC-CCCCCCCeEEecc
Q psy2951 793 FVMKANVSSFEKNEKNDVTAANLDNGTTIP-ADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEY-LETNVPGVYAGGD 870 (1466)
Q Consensus 793 ~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~-~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~-~~t~~~~iya~GD 870 (1466)
++++.++.+++..+ + ...+.+.+|+++. +|.||+|+|++|+++++...+++ +++|++.+|++ ++|+.|+|||+||
T Consensus 232 ~~~~~~v~~i~~~~-~-~~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~~-~~~g~i~v~~~~~~t~~~~v~a~GD 308 (369)
T 3d1c_A 232 MNVHYTVKDIDFNN-G-QYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFV-TTNQDIKLTTHDESTRYPNIFMIGA 308 (369)
T ss_dssp EECSCCEEEEEEET-T-EEEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHSC-CTTSCCCBCTTSBBSSSTTEEECST
T ss_pred EecCcEEEEEEecC-C-ceEEEecCCeEeccCCceEEeeccCCccchhhhhhcc-CCCCCEEechhhcccCCCCeEEecc
Confidence 99999999996322 2 2357778888775 69999999999998776655566 77899999975 6789999999999
Q ss_pred ccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCC
Q psy2951 871 IAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK 907 (1466)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~ 907 (1466)
|+..+...+ ..+..+..||+.+|++|.+..
T Consensus 309 ~~~~~~~~~-------~~~~~~~~~a~~~a~~l~~~~ 338 (369)
T 3d1c_A 309 TVENDNAKL-------CYIYKFRARFAVLAHLLTQRE 338 (369)
T ss_dssp TCCCSSCCC-------CSHHHHGGGHHHHHHHHHHHT
T ss_pred ccccCCeeE-------EEEehhhHHHHHHHHHHhccc
Confidence 998765431 233567889999999998753
No 157
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.95 E-value=3.4e-29 Score=320.71 Aligned_cols=330 Identities=16% Similarity=0.137 Sum_probs=233.6
Q ss_pred CCCeeecC-CCCCCCCeEEEEEEcCeEEEEEcccchhcccc--ccccccccCCCCCCeEEEEcCchHHHHHHHHHHHcCC
Q psy2951 543 ATGDIEDF-PGMDSLPCYKVTIQNDDSVVVQARKDELKNKK--RKLPMAKLSSGNKDTFIVVGGGPSGATCVETLRQNGF 619 (1466)
Q Consensus 543 ~~G~~~~~-p~~~~l~~~~v~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~vvVIGgG~AGl~aA~~l~~~g~ 619 (1466)
..|+..+. +|+.|+.|+.. ...+..+.|.+||. .+++. .+.+....+...+++|+|||||||||+||+.|+++|+
T Consensus 338 ~~g~~~~i~~c~~c~~C~~~-~~~~~~~~C~vnp~-~g~e~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~La~~G~ 415 (690)
T 3k30_A 338 RDGRLNLIRECIGCNICVSG-DLTMSPIRCTQNPS-MGEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGY 415 (690)
T ss_dssp HTTCGGGCCCCCCCCHHHHH-HHTTSCCCCSSCTT-TTTTTTTCCCSSCCCCCSSCCEEEEECCSHHHHHHHHHHHHHTC
T ss_pred HcCCccccccccchhhhhhc-ccCCCcccCCcCcc-cCcccccccCccccCcccccceEEEECCCHHHHHHHHHHHHCCC
Confidence 34655444 78888776543 23455667888887 44432 1222233445667999999999999999999999998
Q ss_pred CccEEEEcCCCCCCCCCCccchhcc-cCcccccccCHhHhhhC-CcEEEEceEEEEeccccccEEEccCCCEEecCEEEE
Q psy2951 620 TGKLYFITDENFLPYDRVKLSKQLD-IKADSILLRTEEFYKDN-DIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYL 697 (1466)
Q Consensus 620 ~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-gv~~~~~~~v~~i~~~~~~~v~~~~~~~~~~d~lvi 697 (1466)
+ |+++|+++.+++.......... ....++..+....+.+. ++++++++.++. .++.++.||+|||
T Consensus 416 ~--V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~-----------~~~~~~~~d~lvl 482 (690)
T 3k30_A 416 D--VVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESPMTG-----------DDIVEFGFEHVIT 482 (690)
T ss_dssp E--EEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSCCCCH-----------HHHHHTTCCEEEE
T ss_pred e--EEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECCeecH-----------HHHhhcCCCEEEE
Confidence 7 8999998765543211111111 23345556666777777 999998874321 2334678999999
Q ss_pred cCCCC--------CCcCCCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEEC--CChHHHHHHHHHhccCCeEEEEeecC
Q psy2951 698 ATGSS--------PRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIG--SSFIGMEAAAFCASKVKSVTVVGRGA 767 (1466)
Q Consensus 698 AtG~~--------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG--~G~~g~e~A~~l~~~g~~V~lv~~~~ 767 (1466)
|||+. |..|+++ |.+... ..+..+... .....+++|+||| +|.+|+|+|..|++.|.+|+++++.+
T Consensus 483 AtG~~~~~~~~~~~~~~~i~-G~~~~~-v~~~~~~l~--~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~ 558 (690)
T 3k30_A 483 ATGATWRTDGVARFHTTALP-IAEGMQ-VLGPDDLFA--GRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA 558 (690)
T ss_dssp CCCEEECSSCCSSSCSSCCC-BCTTSE-EECHHHHHT--TCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cCCCccccccccccCCCCCC-CCCCCc-EEcHHHHhC--CCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc
Confidence 99998 4577788 776221 124444332 3445688999999 99999999999999999999999998
Q ss_pred ccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccCccccccCCceee
Q psy2951 768 VPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELN 847 (1466)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~ 847 (1466)
.++....+......+.+.++++||++++++++++++. ++..+..+...+++++++|.||+|+|++|++.+++.++..
T Consensus 559 ~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~-~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~l~~~-- 635 (690)
T 3k30_A 559 QVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGA-GGVTVRDTYASIERELECDAVVMVTARLPREELYLDLVAR-- 635 (690)
T ss_dssp STTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEET-TEEEEEETTTCCEEEEECSEEEEESCEEECCHHHHHHHHH--
T ss_pred ccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEEC-CeEEEEEccCCeEEEEECCEEEECCCCCCChHHHHHHhhh--
Confidence 7664444455677888999999999999999999983 2211111113456689999999999999998877653221
Q ss_pred CCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCCCcCcccCe
Q psy2951 848 GQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKTSLSTIPF 915 (1466)
Q Consensus 848 ~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~~~~~~~~~ 915 (1466)
+. +|+.|+|||+|||+..+. +..|+.||+.||.+|.+.....+..||
T Consensus 636 --~~-------~t~~~~VyaiGD~~~~~~------------~~~A~~~g~~aa~~i~~~l~g~~~~p~ 682 (690)
T 3k30_A 636 --RD-------AGEIASVRGIGDAWAPGT------------IAAAVWSGRRAAEEFDAVLPSNDEVPF 682 (690)
T ss_dssp --HH-------HTSCSEEEECGGGTSCBC------------HHHHHHHHHHHHHHTTCCCCCTTSCSS
T ss_pred --hc-------ccCCCCEEEEeCCCchhh------------HHHHHHHHHHHHHHHHhhccCCCCCCc
Confidence 11 788999999999997543 347999999999999887554444443
No 158
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.95 E-value=4.5e-28 Score=293.57 Aligned_cols=288 Identities=15% Similarity=0.228 Sum_probs=206.4
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc-cCcccccccCHhHhhhCCcEEEEceEEE
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD-IKADSILLRTEEFYKDNDIHVIKGKKII 672 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 672 (1466)
..++|+||||||||+++|..|+++|....|+++++++.+ |.......... ....++...+.+++++.+++++.++.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~-gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 83 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP-FGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG 83 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS-CTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC-CceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe
Confidence 358999999999999999999999955669999998765 32211110000 1223455556677788899999987441
Q ss_pred EeccccccEEEccCCCEEecCEEEEcCCCCC-CcCCCCCCCC--cEEEecCHHHHHh-------hcccCCCCCcEEEECC
Q psy2951 673 SDSELNEKKIKLQDGTSIDFTKIYLATGSSP-RTISQADGVN--KVFYLRTVEDANN-------IAPHITPESNVVVIGS 742 (1466)
Q Consensus 673 ~i~~~~~~~v~~~~~~~~~~d~lviAtG~~~-~~~~~~~g~~--~~~~~~~~~~~~~-------~~~~~~~~~~vvVvG~ 742 (1466)
+.+++.+ ..+.||+||||||+.+ +.|++| |.+ ++++..++....+ +...+ .+++|+|||+
T Consensus 84 -------~~V~~~~-~~~~~d~lVlAtGs~~~~~~~ip-G~~~~gv~~~~~~~~~~~~~~d~~~~~~~~-~~~~vvVIGg 153 (460)
T 1cjc_A 84 -------RDVTVQE-LQDAYHAVVLSYGAEDHQALDIP-GEELPGVFSARAFVGWYNGLPENRELAPDL-SCDTAVILGQ 153 (460)
T ss_dssp -------TTBCHHH-HHHHSSEEEECCCCCEECCCCCT-TTTSTTEEEHHHHHHHHTTCGGGTTCCCCT-TSSEEEEESC
T ss_pred -------eEEEecc-ceEEcCEEEEecCcCCCCCCCCC-CCCCCcEEEHHHHHHHhhcCccccccccCC-CCCEEEEECC
Confidence 1233333 3478999999999995 778898 876 6776554432211 11112 5899999999
Q ss_pred ChHHHHHHHHHh--------------------ccCC-eEEEEeecCccCc-------------c---------cc-----
Q psy2951 743 SFIGMEAAAFCA--------------------SKVK-SVTVVGRGAVPFQ-------------E---------SL----- 774 (1466)
Q Consensus 743 G~~g~e~A~~l~--------------------~~g~-~V~lv~~~~~~~~-------------~---------~~----- 774 (1466)
|++|+|+|..|+ +.+. +|+++.|.+.... + .+
T Consensus 154 G~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~ 233 (460)
T 1cjc_A 154 GNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQD 233 (460)
T ss_dssp SHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHH
T ss_pred CHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhh
Confidence 999999999998 5675 7999999875310 0 11
Q ss_pred -----CH---HHHHHHHHHHHh--------------cCcEEEccceEEEEEecCCC-ceEEEECC---------------
Q psy2951 775 -----GK---EVGERITKLFES--------------KGVKFVMKANVSSFEKNEKN-DVTAANLD--------------- 816 (1466)
Q Consensus 775 -----~~---~~~~~~~~~l~~--------------~gv~~~~~~~v~~i~~~~~~-~~~~v~~~--------------- 816 (1466)
+. .+.+.+.+.+++ +||+++++..+.+|...+++ ++..+.+.
T Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~ 313 (460)
T 1cjc_A 234 RIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVP 313 (460)
T ss_dssp HTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEE
T ss_pred hhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccC
Confidence 11 123444455555 89999999999999844324 55444442
Q ss_pred CC--cEEecCEEEEccccccCccccccCCc-eeeCCCcEEeCCCCCCC-CCCeEEeccccccCCcccCCceeeeccHHHH
Q psy2951 817 NG--TTIPADLVIVGIGTVLNTNYLDGKGV-ELNGQKAVVVNEYLETN-VPGVYAGGDIAYAPLHSFYNKNASIGHYQLA 892 (1466)
Q Consensus 817 ~g--~~i~~D~vi~a~G~~p~~~~~~~~gl-~~~~~G~i~vd~~~~t~-~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A 892 (1466)
+| ++++||+||+++|++|++ + .|+ +++++|++.+|+++||+ .|+|||+|||+..+.. .+..|
T Consensus 314 ~g~~~~i~~d~Vi~a~G~~p~~-l---~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~~----------~i~~a 379 (460)
T 1cjc_A 314 TGDVEDLPCGLVLSSIGYKSRP-I---DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRGPTG----------VITTT 379 (460)
T ss_dssp EEEEEEEECSEEEECCCEECCC-C---CTTSCCBTTTTBCCEETTEETTCTTEEECTHHHHCTTC----------CHHHH
T ss_pred CCceEEEEcCEEEECCCCCCCC-C---CCCcccccCCCeeECCCCcCcCCCCEEEEEeCCcCCCc----------cHHHH
Confidence 34 579999999999999997 3 578 88888999999999999 7999999999976542 23579
Q ss_pred HHHHHHHHHHhccC
Q psy2951 893 QYHGRIAALNMVEK 906 (1466)
Q Consensus 893 ~~~g~~aA~~i~~~ 906 (1466)
+.+|+.+|.+|++.
T Consensus 380 ~~~g~~aa~~i~~~ 393 (460)
T 1cjc_A 380 MTDSFLTGQILLQD 393 (460)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999753
No 159
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.95 E-value=3e-29 Score=321.91 Aligned_cols=331 Identities=16% Similarity=0.141 Sum_probs=218.8
Q ss_pred CCCCCCCeEEEEEEcCeEEEEEcccchhcccc--ccccccccCCCCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcC
Q psy2951 551 PGMDSLPCYKVTIQNDDSVVVQARKDELKNKK--RKLPMAKLSSGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITD 628 (1466)
Q Consensus 551 p~~~~l~~~~v~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~ 628 (1466)
+|..|..|+.....++....|..|+. .+++. .+.+....+....++|+|||||||||+||+.|+++|++ |+++|+
T Consensus 344 ~ci~Cn~C~~~~~~~~~~~~C~~n~~-~g~e~~~~~~~~~~~~~~~~~~VvIIGgGpAGl~aA~~L~~~G~~--Vtlie~ 420 (729)
T 1o94_A 344 VCIGCNVCISRWEIGGPPMICTQNAT-AGEEYRRGWHPEKFRQTKNKDSVLIVGAGPSGSEAARVLMESGYT--VHLTDT 420 (729)
T ss_dssp CCCCCCHHHHHHHHSSSCCCCSSCTT-TTTHHHHCCCTTCCCCCSSCCEEEEECCSHHHHHHHHHHHHTTCE--EEEECS
T ss_pred cccccchhcccccccCCceeeccCcc-ccccccccccccccccccCCceEEEECCCHHHHHHHHHHHHCCCe--EEEEeC
Confidence 45555444421012344556777776 34331 12222223445678999999999999999999999987 899999
Q ss_pred CCCCCCCCCccchhcc-cCcccccccCHhHhhh------CCcEEEEceEEEEeccccccEEEccCCCEEecCEEEEcCCC
Q psy2951 629 ENFLPYDRVKLSKQLD-IKADSILLRTEEFYKD------NDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGS 701 (1466)
Q Consensus 629 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~gv~~~~~~~v~~i~~~~~~~v~~~~~~~~~~d~lviAtG~ 701 (1466)
++.+++.......... .....+..+....++. .++++..++ .++++++..+.||+||||||+
T Consensus 421 ~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~i~~~~-----------~v~~~~~~~~~~d~vviAtG~ 489 (729)
T 1o94_A 421 AEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQLALGQK-----------PMTADDVLQYGADKVIIATGA 489 (729)
T ss_dssp SSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEEECSCC-----------CCCHHHHHTSCCSEEEECCCE
T ss_pred CCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceEEEeCe-----------EEehhhccccCCCEEEEcCCC
Confidence 8765432211110000 0111111222222221 244443333 233334456889999999998
Q ss_pred C--------CCcCCCCCCCC----cEEEecCHHHHHhhcccCCCCCcEEEEC--CChHHHHHHHHHhccCCeEEEEeecC
Q psy2951 702 S--------PRTISQADGVN----KVFYLRTVEDANNIAPHITPESNVVVIG--SSFIGMEAAAFCASKVKSVTVVGRGA 767 (1466)
Q Consensus 702 ~--------~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~vvVvG--~G~~g~e~A~~l~~~g~~V~lv~~~~ 767 (1466)
. |..|+++ |.+ +++ +..+... .....+++|+||| +|++|+|+|..|++.|.+||++++.+
T Consensus 490 ~~~~~~~~~p~~~~ip-G~~~~~~~v~---~~~~~l~--~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 490 RWNTDGTNCLTHDPIP-GADASLPDQL---TPEQVMD--GKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp EECSSCCCTTTSSCCT-TCCTTSTTEE---CHHHHHH--CCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcccccccCccCCCCC-CccccCCCEE---EHHHHhc--CCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 7 5667788 765 444 3344432 3344689999999 99999999999999999999999988
Q ss_pred ccCcc-ccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCC-cE------------------EecCEEE
Q psy2951 768 VPFQE-SLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNG-TT------------------IPADLVI 827 (1466)
Q Consensus 768 ~~~~~-~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g-~~------------------i~~D~vi 827 (1466)
++.. .++.. ...+.+.|+++||++++++.+++|+. ++......+.++ ++ +++|.||
T Consensus 564 -l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv 639 (729)
T 1o94_A 564 -LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLV 639 (729)
T ss_dssp -TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEE
T ss_pred -cccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEE
Confidence 4421 23323 45677888999999999999999983 221111112333 23 9999999
Q ss_pred EccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCC
Q psy2951 828 VGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK 907 (1466)
Q Consensus 828 ~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~ 907 (1466)
+|+|++|++++++.++. .+|++++|+.|+|||+|||+... .+..|+.||+.||.+|.+..
T Consensus 640 ~a~G~~p~~~l~~~l~~--------~vd~~~~t~~~~VyAiGD~~~~~------------~~~~A~~~G~~aA~~i~~~l 699 (729)
T 1o94_A 640 LVTGRHSECTLWNELKA--------RESEWAENDIKGIYLIGDAEAPR------------LIADATFTGHRVAREIEEAN 699 (729)
T ss_dssp EESCEEECCHHHHHHHH--------TGGGTGGGTCCEEEECGGGTSCC------------CHHHHHHHHHHHHHTTTSSC
T ss_pred ECCCCCCChHHHHHHhh--------hcccccccCCCCeEEEeCccchh------------hHHHHHHHHHHHHHHhhhhc
Confidence 99999999887764321 26788999999999999998632 34689999999999998753
Q ss_pred CcCcccCeeeeeecCceeEE
Q psy2951 908 TSLSTIPFFWTMLFGVGFRF 927 (1466)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~ 927 (1466)
.+..+|| |+..|+...++
T Consensus 700 -~~~~~p~-~~~~~~~~~~~ 717 (729)
T 1o94_A 700 -PQIAIPY-KRETIAWGTPH 717 (729)
T ss_dssp -TTSCCCC-CCCCCCTTCCS
T ss_pred -ccCCCCe-eeecccCcccc
Confidence 4567786 66677666544
No 160
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.95 E-value=4.5e-28 Score=293.58 Aligned_cols=287 Identities=15% Similarity=0.230 Sum_probs=207.6
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc-cCcccccccChhhhccCCcEEEcCCeEEE
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD-IKADSILLRTEEFYKDNDIHVIKGKKIIS 1144 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~v~~ 1144 (1466)
.++|+|||||+||+++|..|++.+...+|+|||+++.+ |.......... .....+.....+++++.+++++.++.+
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~-gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v-- 82 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP-FGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEV-- 82 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS-CTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCB--
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC-CceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEE--
Confidence 46899999999999999999999844599999998865 32110000000 011222223345677889999988744
Q ss_pred eecCCCCeEEecCCcEEecCeEEEecCCCC-CcCCCCCCCC--cEEEecCHHHH-------HhhhcccCCCCeEEEEcCC
Q psy2951 1145 DSELNEKKIKLQDGTSIDFTKIYLATGSSP-RTISQADGVN--KVFYLRTVEDA-------NNIAPHITPESNVVVIGSS 1214 (1466)
Q Consensus 1145 i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~-~~~~~~~g~~--~v~~~~~~~~~-------~~l~~~~~~~~~vvVvG~g 1214 (1466)
. +.|.+++. .+.||+||+|||+.+ +.+++| |.+ ++++.+++... ..+...+ .+++|+|||+|
T Consensus 83 --~---~~V~~~~~-~~~~d~lVlAtGs~~~~~~~ip-G~~~~gv~~~~~~~~~~~~~~d~~~~~~~~-~~~~vvVIGgG 154 (460)
T 1cjc_A 83 --G---RDVTVQEL-QDAYHAVVLSYGAEDHQALDIP-GEELPGVFSARAFVGWYNGLPENRELAPDL-SCDTAVILGQG 154 (460)
T ss_dssp --T---TTBCHHHH-HHHSSEEEECCCCCEECCCCCT-TTTSTTEEEHHHHHHHHTTCGGGTTCCCCT-TSSEEEEESCS
T ss_pred --e---eEEEeccc-eEEcCEEEEecCcCCCCCCCCC-CCCCCcEEEHHHHHHHhhcCccccccccCC-CCCEEEEECCC
Confidence 1 23555443 478999999999985 778899 876 78877655322 1111122 48999999999
Q ss_pred HHHHHHHHHHh--------------------cCCC-eEEEEcCCCcCC--------------c--------ccc------
Q psy2951 1215 FIGMEAAAFCA--------------------SKVK-SVTVVGRGAVPF--------------Q--------ESL------ 1245 (1466)
Q Consensus 1215 ~~g~e~a~~l~--------------------~~g~-~v~vv~~~~~~~--------------~--------~~~------ 1245 (1466)
++|+|+|..|+ +.+. +|+++.|.+... + ..+
T Consensus 155 ~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~ 234 (460)
T 1cjc_A 155 NVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDR 234 (460)
T ss_dssp HHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHH
T ss_pred HHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhh
Confidence 99999999998 5677 799999887431 1 010
Q ss_pred ----cH---HHHHHHHHHHHh--------------CCcEEEcCceEEEEEecCCC-cEEEEEcC---------------C
Q psy2951 1246 ----GK---EVGERITKLFES--------------KGVKFVMKANVSSFEKNEKN-DVTAANLD---------------N 1288 (1466)
Q Consensus 1246 ----~~---~~~~~l~~~~~~--------------~gv~~~~~~~v~~i~~~~~g-~~~~v~l~---------------~ 1288 (1466)
+. .+.+.|.+.+++ +||+++++..+.++...+++ ++..|++. +
T Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~ 314 (460)
T 1cjc_A 235 IKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPT 314 (460)
T ss_dssp TTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEE
T ss_pred hhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCC
Confidence 11 134455555655 89999999999999832225 66556553 3
Q ss_pred C--CeeecCEEEEeeccccCccccccCCc-eeeCCCeEEeCCCcccc-CCCEEEecccccCCCccCCCceeeeecHHHHH
Q psy2951 1289 G--TTIPADLVIVGIGTVLNTNYLDGKGV-ELNGQKAVVVNEYLETN-VPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQ 1364 (1466)
Q Consensus 1289 g--~~i~~D~vv~a~G~~p~~~~~~~~gl-~~~~~G~i~vd~~~~t~-~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~ 1364 (1466)
| ++++||+||+++|+.|++ + .|+ +++.+|+|.+|+++||+ .|+|||+|||+..|... +..|.
T Consensus 315 g~~~~i~~d~Vi~a~G~~p~~-l---~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~~~----------i~~a~ 380 (460)
T 1cjc_A 315 GDVEDLPCGLVLSSIGYKSRP-I---DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRGPTGV----------ITTTM 380 (460)
T ss_dssp EEEEEEECSEEEECCCEECCC-C---CTTSCCBTTTTBCCEETTEETTCTTEEECTHHHHCTTCC----------HHHHH
T ss_pred CceEEEEcCEEEECCCCCCCC-C---CCCcccccCCCeeECCCCcCcCCCCEEEEEeCCcCCCcc----------HHHHH
Confidence 4 579999999999999997 3 678 88887889999999999 79999999999766532 36799
Q ss_pred HHHHHHHHHhcCC
Q psy2951 1365 YHGRIAALNMVEK 1377 (1466)
Q Consensus 1365 ~qa~~aa~~i~g~ 1377 (1466)
.||+.+|.+|++.
T Consensus 381 ~~g~~aa~~i~~~ 393 (460)
T 1cjc_A 381 TDSFLTGQILLQD 393 (460)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999864
No 161
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.95 E-value=2.4e-27 Score=312.19 Aligned_cols=278 Identities=14% Similarity=0.142 Sum_probs=206.9
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccc-hhcc-cCcccccccCHhHhhhC-CcEEEEceEE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLS-KQLD-IKADSILLRTEEFYKDN-DIHVIKGKKI 671 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~-gv~~~~~~~v 671 (1466)
.+||+||||||||++||..|++.|++ |+++|+++.+++.....+ ..+. ....++.....+.+.+. +++++.+++|
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~--V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V 205 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGAR--VMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTV 205 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC--EEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCc--EEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEE
Confidence 57999999999999999999999987 899999876553222100 0111 11222333334445554 9999999888
Q ss_pred EEeccccccEEE---------c--------cCCCEEecCEEEEcCCCCCCcCCCCCCCC--cEEEecCHHHHHhhcccCC
Q psy2951 672 ISDSELNEKKIK---------L--------QDGTSIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHIT 732 (1466)
Q Consensus 672 ~~i~~~~~~~v~---------~--------~~~~~~~~d~lviAtG~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~ 732 (1466)
..+ +....... + .++.++.||+||||||+.|+.|++| |.+ +++...+..+..+... ..
T Consensus 206 ~~i-~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ip-G~~~~gv~~~~~~~~~l~~~~-~~ 282 (965)
T 2gag_A 206 FGS-YDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFE-NNDRPGIMLAGAVRSYLNRYG-VR 282 (965)
T ss_dssp EEE-ETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCB-TCCSTTEEEHHHHHHHHHTTC-EE
T ss_pred Eee-ecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCC-CCCCCCEEEhHHHHHHHHhcC-CC
Confidence 887 44322111 1 1123689999999999999999998 876 6776655544332111 22
Q ss_pred CCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEE
Q psy2951 733 PESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTA 812 (1466)
Q Consensus 733 ~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~ 812 (1466)
++++|+|||+|++|+|+|..|++.|.+|+++++.+.++. . .+.+++.||+++++..++++...+++++..
T Consensus 283 ~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~-----~-----~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~ 352 (965)
T 2gag_A 283 AGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA-----A-----AAQAVADGVQVISGSVVVDTEADENGELSA 352 (965)
T ss_dssp SCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH-----H-----HHHHHHTTCCEEETEEEEEEEECTTSCEEE
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch-----h-----HHHHHhCCeEEEeCCEeEEEeccCCCCEEE
Confidence 479999999999999999999999999999999886542 1 466889999999999999998421445555
Q ss_pred EECCC-------C--cEEecCEEEEccccccCccccccCCceeeCCCcEEeCCCCC-----CCCCCeEEeccccccCCcc
Q psy2951 813 ANLDN-------G--TTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLE-----TNVPGVYAGGDIAYAPLHS 878 (1466)
Q Consensus 813 v~~~~-------g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~-----t~~~~iya~GD~~~~~~~~ 878 (1466)
+.+.+ | +++++|.|++++|++|++++++.. .|.|.+|++++ |+.|+|||+|||+..+..
T Consensus 353 v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~------~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~l- 425 (965)
T 2gag_A 353 IVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQR------QGKLDWDTTIHAFVPADAVANQHLAGAMTGRLDT- 425 (965)
T ss_dssp EEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHT------TCCEEEETTTTEEEECSCCTTEEECGGGGTCCSH-
T ss_pred EEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHhC------CCcEEEcCcccccccCCCCCCEEEEEecCCchhH-
Confidence 66553 4 689999999999999999887654 35788888877 899999999999976432
Q ss_pred cCCceeeeccHHHHHHHHHHHHHHhcc
Q psy2951 879 FYNKNASIGHYQLAQYHGRIAALNMVE 905 (1466)
Q Consensus 879 ~~~~~~~~~~~~~A~~~g~~aA~~i~~ 905 (1466)
..|..||+.||.+|++
T Consensus 426 -----------~~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 426 -----------ASALSTGAATGAAAAT 441 (965)
T ss_dssp -----------HHHHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHHHHHHH
Confidence 3899999999999975
No 162
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.94 E-value=1.9e-26 Score=281.09 Aligned_cols=271 Identities=15% Similarity=0.181 Sum_probs=199.0
Q ss_pred CeEEEEcCchHHHHHHHHHHH---cCCC-ccEEEEcCCCCCCCCCCc----------------cchhc------------
Q psy2951 596 DTFIVVGGGPSGATCVETLRQ---NGFT-GKLYFITDENFLPYDRVK----------------LSKQL------------ 643 (1466)
Q Consensus 596 ~~vvVIGgG~AGl~aA~~l~~---~g~~-~~v~~~~~~~~~~~~~~~----------------~~~~~------------ 643 (1466)
++|+||||||||++||..|++ .|.+ ..|+++|+.+.+++.... +...+
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 699999999999999999999 8875 237788887543321110 00000
Q ss_pred --------------ccCcccccccCHhHhhhCCcE--EEEceEEEEeccccc----cEEEccC---C--CEEecCEEEEc
Q psy2951 644 --------------DIKADSILLRTEEFYKDNDIH--VIKGKKIISDSELNE----KKIKLQD---G--TSIDFTKIYLA 698 (1466)
Q Consensus 644 --------------~~~~~~~~~~~~~~~~~~gv~--~~~~~~v~~i~~~~~----~~v~~~~---~--~~~~~d~lviA 698 (1466)
......+..++..++++.+++ ++++++|..+ +... +.|++.+ + .++.||+||+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v-~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvA 161 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHV-EFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCC 161 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEE-EEETTTTEEEEEEEETTTTEEEEEEESEEEEC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEE-EEcCCCCcEEEEEEEcCCCceEEEEcCEEEEC
Confidence 011123333445556667887 8889989988 4432 3676654 3 57899999999
Q ss_pred CC--CCCCcCCCCCCCCc----EEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCcc
Q psy2951 699 TG--SSPRTISQADGVNK----VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQE 772 (1466)
Q Consensus 699 tG--~~~~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~ 772 (1466)
|| +.|+.|+++ |.+. +++.....+. ....+|+|+|||+|++|+|+|..|++.|.+|+++.+.+.++..
T Consensus 162 tG~~s~p~~p~ip-G~~~~~g~~~hs~~~~~~-----~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~ 235 (464)
T 2xve_A 162 TGHFSTPYVPEFE-GFEKFGGRILHAHDFRDA-----LEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGY 235 (464)
T ss_dssp CCSSSSBCCCCCB-TTTTCCSEEEEGGGCCCG-----GGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCC
T ss_pred CCCCCCCccCCCC-CcccCCceEEehhhhCCH-----hHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCC
Confidence 99 899999998 8762 3332222111 1124899999999999999999999999999999998876533
Q ss_pred ccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccCcccccc-CCceeeCCCc
Q psy2951 773 SLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDG-KGVELNGQKA 851 (1466)
Q Consensus 773 ~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~-~gl~~~~~G~ 851 (1466)
.+ ..||+++ ..|++++. + .+.+.+|+++++|.||+|||++|+++++.. .++.++++|+
T Consensus 236 ~~-------------~~~V~~~--~~V~~i~~--~----~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~~~~ 294 (464)
T 2xve_A 236 KW-------------PENWDER--PNLVRVDT--E----NAYFADGSSEKVDAIILCTGYIHHFPFLNDDLRLVTNNRLW 294 (464)
T ss_dssp CC-------------CTTEEEC--SCEEEECS--S----EEEETTSCEEECSEEEECCCBCCCCTTBCTTTCCCCCSSSC
T ss_pred CC-------------CCceEEc--CCeEEEeC--C----EEEECCCCEEeCCEEEECCCCCCCCCCcCcccccccCCCcc
Confidence 22 2588887 67888862 2 477889999999999999999999998875 6888777656
Q ss_pred EEeCC---CCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCC
Q psy2951 852 VVVNE---YLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK 907 (1466)
Q Consensus 852 i~vd~---~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~ 907 (1466)
+ ++. .++|+.|+|||+||++... .+..|..||+.+|+++.|+.
T Consensus 295 v-~~~~~~~~~t~~p~i~aiGd~~~~~------------~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 295 P-LNLYKGVVWEDNPKFFYIGMQDQWY------------SFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp C-SSEETTTEESSSTTEEECSCSCCSS------------CHHHHHHHHHHHHHHHTTSS
T ss_pred c-ccccceEecCCCCCEEEEeCccccc------------chHHHHHHHHHHHHHHcCCC
Confidence 5 443 3578999999999987532 34689999999999999864
No 163
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.94 E-value=1.2e-26 Score=282.79 Aligned_cols=270 Identities=15% Similarity=0.198 Sum_probs=199.7
Q ss_pred CcEEEECCchHHHHHHHHHHh---cCCCCc---EEEEcCCCCCC----CCC---------C---CCchhhc--cC-----
Q psy2951 1067 DTFIVVGGGPSGATCVETLRQ---NGFTGK---LYFITDENFLP----YDR---------V---KLSKQLD--IK----- 1117 (1466)
Q Consensus 1067 ~~vvIVG~G~aGl~aA~~L~~---~g~~~~---i~li~~~~~~~----~~~---------~---~l~~~~~--~~----- 1117 (1466)
++|+|||||+||++||..|++ .|. + |+|||+++.++ |.. + .+...+. .+
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~--~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~ 80 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGA--EIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLE 80 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTC--CCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCC--CCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcc
Confidence 589999999999999999999 888 7 99999986543 110 0 0000000 00
Q ss_pred c-------------------ccccccChhhhccCCcE--EEcCCeEEEeecCCCC----eEEecC---C--cEEecCeEE
Q psy2951 1118 A-------------------DSILLRTEEFYKDNDIH--VIKGKKIISDSELNEK----KIKLQD---G--TSIDFTKIY 1167 (1466)
Q Consensus 1118 ~-------------------~~~~~~~~~~~~~~~v~--~~~~~~v~~i~d~~~~----~v~~~~---g--~~~~yd~lv 1167 (1466)
. ..+.....+++++.+++ ++++++|+.+ +.... +|++.+ | .++.||+||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v-~~~~~~~~~~V~~~~~~~g~~~~~~~d~VV 159 (464)
T 2xve_A 81 FADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHV-EFNEDSQTFTVTVQDHTTDTIYSEEFDYVV 159 (464)
T ss_dssp BTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEE-EEETTTTEEEEEEEETTTTEEEEEEESEEE
T ss_pred cCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEE-EEcCCCCcEEEEEEEcCCCceEEEEcCEEE
Confidence 0 00000011233445777 8899999999 76544 677765 3 578999999
Q ss_pred EecC--CCCCcCCCCCCCC---c-EEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCC
Q psy2951 1168 LATG--SSPRTISQADGVN---K-VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPF 1241 (1466)
Q Consensus 1168 lAtG--~~~~~~~~~~g~~---~-v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~ 1241 (1466)
+||| +.|+.|++| |++ + +.+..++.+... ..+++|+|||+|.+|+|+|..|++.|.+|+++++.+.++
T Consensus 160 vAtG~~s~p~~p~ip-G~~~~~g~~~hs~~~~~~~~-----~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~ 233 (464)
T 2xve_A 160 CCTGHFSTPYVPEFE-GFEKFGGRILHAHDFRDALE-----FKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPM 233 (464)
T ss_dssp ECCCSSSSBCCCCCB-TTTTCCSEEEEGGGCCCGGG-----GTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCC
T ss_pred ECCCCCCCCccCCCC-CcccCCceEEehhhhCCHhH-----cCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCC
Confidence 9999 799999998 876 2 343332222211 148999999999999999999999999999999988776
Q ss_pred cccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCcccccc-CCceeeCC
Q psy2951 1242 QESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDG-KGVELNGQ 1320 (1466)
Q Consensus 1242 ~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~~~~~~-~gl~~~~~ 1320 (1466)
...+ ..||+++ ..|++++ ++ .|.+.||+++++|.||+|||+.|++++|.. .|+.++++
T Consensus 234 ~~~~-------------~~~V~~~--~~V~~i~--~~----~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~~ 292 (464)
T 2xve_A 234 GYKW-------------PENWDER--PNLVRVD--TE----NAYFADGSSEKVDAIILCTGYIHHFPFLNDDLRLVTNNR 292 (464)
T ss_dssp CCCC-------------CTTEEEC--SCEEEEC--SS----EEEETTSCEEECSEEEECCCBCCCCTTBCTTTCCCCCSS
T ss_pred CCCC-------------CCceEEc--CCeEEEe--CC----EEEECCCCEEeCCEEEECCCCCCCCCCcCcccccccCCC
Confidence 5433 2578887 6788886 22 388899999999999999999999999886 68887765
Q ss_pred CeEEeC---CCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCCC
Q psy2951 1321 KAVVVN---EYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT 1379 (1466)
Q Consensus 1321 G~i~vd---~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~ 1379 (1466)
|++ ++ ..++|+.|+|||+|||+..+ .|..|..||+.+|++|.|+..
T Consensus 293 ~~v-~~~~~~~~~t~~p~i~aiGd~~~~~------------~~~~a~~qa~~~a~~l~G~~~ 341 (464)
T 2xve_A 293 LWP-LNLYKGVVWEDNPKFFYIGMQDQWY------------SFNMFDAQAWYARDVIMGRLP 341 (464)
T ss_dssp SCC-SSEETTTEESSSTTEEECSCSCCSS------------CHHHHHHHHHHHHHHHTTSSC
T ss_pred ccc-ccccceEecCCCCCEEEEeCccccc------------chHHHHHHHHHHHHHHcCCCC
Confidence 555 44 34678999999999987532 358899999999999999653
No 164
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.94 E-value=8e-28 Score=308.73 Aligned_cols=299 Identities=17% Similarity=0.183 Sum_probs=210.3
Q ss_pred CCCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhccCcccccccChhhhccCCcEEE--cCCe
Q psy2951 1064 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLRTEEFYKDNDIHVI--KGKK 1141 (1466)
Q Consensus 1064 ~~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~ 1141 (1466)
...++|+|||||+||++||..|++.|+ +|+|||+++.++........ +. ....+ ....+++.. .++.+ .+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~--~Vtlie~~~~~GG~~~~~~~-~p-g~~~~-~~~~~~~~~-~i~~~~~~~~~ 460 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGY--TVHLTDTAEKIGGHLNQVAA-LP-GLGEW-SYHRDYRET-QITKLLKKNKE 460 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSSSTTTTHHHHTT-ST-TCGGG-HHHHHHHHH-HHHHHHHHSTT
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCC--eEEEEeCCCCcCCeeeeccc-CC-ChHHH-HHHHHHHHH-HHHHhhcccCC
Confidence 346799999999999999999999998 89999998875532111000 00 00000 000011110 11111 1112
Q ss_pred EEEeecCCCCeEEecCCcEEecCeEEEecCCC--------CCcCCCCCCCC----cEEEecCHHHHHhhhcccCCCCeEE
Q psy2951 1142 IISDSELNEKKIKLQDGTSIDFTKIYLATGSS--------PRTISQADGVN----KVFYLRTVEDANNIAPHITPESNVV 1209 (1466)
Q Consensus 1142 v~~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~--------~~~~~~~~g~~----~v~~~~~~~~~~~l~~~~~~~~~vv 1209 (1466)
+..+ +. ++.|.++++..+.||+||||||+. |+.+++| |.+ ++++ ..++ +......+++|+
T Consensus 461 ~v~i-~~-~~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ip-G~~~~~~~v~~---~~~~--l~~~~~~gk~Vv 532 (729)
T 1o94_A 461 SQLA-LG-QKPMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIP-GADASLPDQLT---PEQV--MDGKKKIGKRVV 532 (729)
T ss_dssp CEEE-CS-CCCCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCT-TCCTTSTTEEC---HHHH--HHCCSCCCSEEE
T ss_pred ceEE-Ee-CeEEehhhccccCCCEEEEcCCCCcccccccCccCCCCC-CccccCCCEEE---HHHH--hcCCCCCCCeEE
Confidence 3344 33 234556566678999999999997 4567788 865 5553 4444 333445689999
Q ss_pred EEc--CCHHHHHHHHHHhcCCCeEEEEcCCCcCCcc-cccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEc
Q psy2951 1210 VIG--SSFIGMEAAAFCASKVKSVTVVGRGAVPFQE-SLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANL 1286 (1466)
Q Consensus 1210 VvG--~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~-~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l 1286 (1466)
||| +|++|+|+|..|++.|.+|+++++.+ ++.+ .++.. ...+.+.++++||++++++.+++++ . ++....+.+
T Consensus 533 VIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~-~-~~v~~~~~~ 608 (729)
T 1o94_A 533 ILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIE-P-GRMEIYNIW 608 (729)
T ss_dssp EEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEE-T-TEEEEEETT
T ss_pred EEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEE-C-CeEEEEEec
Confidence 999 99999999999999999999999988 5442 23322 4567788899999999999999998 3 321111122
Q ss_pred CCC-Ce------------------eecCEEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCC
Q psy2951 1287 DNG-TT------------------IPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPL 1347 (1466)
Q Consensus 1287 ~~g-~~------------------i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~ 1347 (1466)
.++ ++ +++|.||+|+|..|++++++..+. .+|++++|+.|+|||+|||+.. .
T Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~l~~--------~vd~~~~t~~~~VyAiGD~~~~-~ 679 (729)
T 1o94_A 609 GDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWNELKA--------RESEWAENDIKGIYLIGDAEAP-R 679 (729)
T ss_dssp CSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHHHHHH--------TGGGTGGGTCCEEEECGGGTSC-C
T ss_pred CCceEEecccccccccccCCcceeeeCCEEEECCCCCCChHHHHHHhh--------hcccccccCCCCeEEEeCccch-h
Confidence 333 33 899999999999999988764221 2678999999999999999862 2
Q ss_pred ccCCCceeeeecHHHHHHHHHHHHHHhcCCCCCCCCCccceeccccccEEEEeeC
Q psy2951 1348 HSFYNKNASIGHYQLAQYHGRIAALNMVEKKTSLSTIPFFWTMLFGVGFRFAGYA 1402 (1466)
Q Consensus 1348 ~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~~~~~~p~~w~~~~~~~~~~~g~~ 1402 (1466)
.|..|..||+.||.+|.+. .++..+|| |+++++.++|+.|.+
T Consensus 680 -----------~~~~A~~~G~~aA~~i~~~-l~~~~~p~-~~~~~~~~~~~~~~~ 721 (729)
T 1o94_A 680 -----------LIADATFTGHRVAREIEEA-NPQIAIPY-KRETIAWGTPHMPGG 721 (729)
T ss_dssp -----------CHHHHHHHHHHHHHTTTSS-CTTSCCCC-CCCCCCTTCCSSTTC
T ss_pred -----------hHHHHHHHHHHHHHHhhhh-cccCCCCe-eeecccCcccccCCC
Confidence 2478999999999999875 45778897 999999999987653
No 165
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.94 E-value=6e-27 Score=283.33 Aligned_cols=283 Identities=16% Similarity=0.169 Sum_probs=201.6
Q ss_pred CCeEEEEcCchHHHHHHHHHHH-c------CCCccEEEEcCCCCCCCCCCccchhc-ccCcccccccCHhHhhhCCcEEE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQ-N------GFTGKLYFITDENFLPYDRVKLSKQL-DIKADSILLRTEEFYKDNDIHVI 666 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~-~------g~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~gv~~~ 666 (1466)
+++|+||||||||++||..|++ . |.+ |+++++.+.+ |......... .....++..++.+++++.+++++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~--V~lie~~~~~-gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~ 79 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMA--VDMLEMLPTP-WGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFF 79 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEE--EEEEESSSSC-STHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCe--EEEEecCCCC-CCccccccCCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 5799999999999999999999 7 655 8999988653 3222111101 12234555666677788899999
Q ss_pred EceEEEEeccccccEEEccCCCEEecCEEEEcCCCC-CCcCCCCCCCC--cEEEecCHHHHH----hh-ccc-CCCCCcE
Q psy2951 667 KGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSS-PRTISQADGVN--KVFYLRTVEDAN----NI-APH-ITPESNV 737 (1466)
Q Consensus 667 ~~~~v~~i~~~~~~~v~~~~~~~~~~d~lviAtG~~-~~~~~~~~g~~--~~~~~~~~~~~~----~~-~~~-~~~~~~v 737 (1466)
.+.. + + +.|+++++ ++.||+||||||+. ++.+++| |.+ ++++..++.... .+ ... ...+++|
T Consensus 80 ~~v~---v-~---~~v~~~~~-~~~~d~lViAtG~~~~~~~~ip-G~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~v 150 (456)
T 1lqt_A 80 GNVV---V-G---EHVQPGEL-SERYDAVIYAVGAQSDRMLNIP-GEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARA 150 (456)
T ss_dssp ESCC---B-T---TTBCHHHH-HHHSSEEEECCCCCEECCCCCT-TTTSTTEEEHHHHHHHHTTCGGGTTCCCCCCSSEE
T ss_pred eeEE---E-C---CEEEECCC-eEeCCEEEEeeCCCCCCCCCCC-CCCCCCcEEHHHHHhhhhcCcccccchhhcCCCEE
Confidence 8863 2 2 23444444 57899999999997 7888888 865 566554442211 11 011 1258999
Q ss_pred EEECCChHHHHHHHHHhcc--------------------C-CeEEEEeecCccCccccC-------------------HH
Q psy2951 738 VVIGSSFIGMEAAAFCASK--------------------V-KSVTVVGRGAVPFQESLG-------------------KE 777 (1466)
Q Consensus 738 vVvG~G~~g~e~A~~l~~~--------------------g-~~V~lv~~~~~~~~~~~~-------------------~~ 777 (1466)
+|||+|++|+|+|..|++. + .+|+++.|.+.... .+. .+
T Consensus 151 vVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~-~f~~~elrel~~lp~~~~~~~~~~ 229 (456)
T 1lqt_A 151 VVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQA-AFTTLELRELADLDGVDVVIDPAE 229 (456)
T ss_dssp EEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGC-CCCHHHHHHGGGCTTEEEECCGGG
T ss_pred EEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhh-ccChHHHHHhhcCCCceeeeChHH
Confidence 9999999999999999874 4 59999999875321 111 01
Q ss_pred ------------------HHHHHHHHHHh------cCcEEEccceEEEEEecCCCceEEEECC----------------C
Q psy2951 778 ------------------VGERITKLFES------KGVKFVMKANVSSFEKNEKNDVTAANLD----------------N 817 (1466)
Q Consensus 778 ------------------~~~~~~~~l~~------~gv~~~~~~~v~~i~~~~~~~~~~v~~~----------------~ 817 (1466)
+.+.+.+.+.+ +||+++++..+.+|..+ +++..+.+. +
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~--~~v~~v~~~~~~~~~~~~~~~~~~~~ 307 (456)
T 1lqt_A 230 LDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK--RKVERIVLGRNELVSDGSGRVAAKDT 307 (456)
T ss_dssp GTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS--SSCCEEEEEEEEEEECSSSSEEEEEE
T ss_pred hccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC--CcEeEEEEEEEEecCCCcccccccCC
Confidence 12344455555 79999999999999833 333334332 3
Q ss_pred C--cEEecCEEEEccccccCccccccCCceeeCCCcEEeCCCCC-CCCCCeEEeccccccCCcccCCceeeeccHHHHHH
Q psy2951 818 G--TTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLE-TNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQY 894 (1466)
Q Consensus 818 g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~-t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~ 894 (1466)
| ++++||+||+|+|++|++ + .+++++++|++.+|+++| |+.|+|||+|||+..|... +..|+.
T Consensus 308 g~~~~i~~d~vi~a~G~~p~~-l---~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~~~----------i~~a~~ 373 (456)
T 1lqt_A 308 GEREELPAQLVVRSVGYRGVP-T---PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGV----------IGTNKK 373 (456)
T ss_dssp EEEEEEECSEEEECSCEECCC-C---TTSCCBTTTTBCCEETTEETTCSSEEECTHHHHCSCSC----------TTHHHH
T ss_pred CceEEEEcCEEEEccccccCC-C---CCCcccCCCCeeECCCCcCCCCCCEEEEeccCCCCchh----------HHHHHH
Confidence 4 469999999999999997 3 478888889999999999 8999999999999765532 236999
Q ss_pred HHHHHHHHhccC
Q psy2951 895 HGRIAALNMVEK 906 (1466)
Q Consensus 895 ~g~~aA~~i~~~ 906 (1466)
||..+|.+|++.
T Consensus 374 ~g~~~a~~i~~~ 385 (456)
T 1lqt_A 374 DAQDTVDTLIKN 385 (456)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999753
No 166
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.94 E-value=6e-27 Score=283.38 Aligned_cols=284 Identities=16% Similarity=0.169 Sum_probs=203.4
Q ss_pred CCcEEEECCchHHHHHHHHHHh-c------CCCCcEEEEcCCCCCCCCCCCCchhhc-cCcccccccChhhhccCCcEEE
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQ-N------GFTGKLYFITDENFLPYDRVKLSKQLD-IKADSILLRTEEFYKDNDIHVI 1137 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~-~------g~~~~i~li~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~v~~~ 1137 (1466)
.++|+|||||+||++||..|++ . +. +|+|||+++++ |.......... .....+.....+++.+.+++++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~--~V~lie~~~~~-gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~ 79 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDM--AVDMLEMLPTP-WGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFF 79 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCE--EEEEEESSSSC-STHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCC--eEEEEecCCCC-CCccccccCCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 3689999999999999999999 7 66 99999998763 32211000000 1112222333456677899998
Q ss_pred cCCeEEEeecCCCCeEEecCCcEEecCeEEEecCCC-CCcCCCCCCCC--cEEEecCHHHHHhhh----ccc--CCCCeE
Q psy2951 1138 KGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSS-PRTISQADGVN--KVFYLRTVEDANNIA----PHI--TPESNV 1208 (1466)
Q Consensus 1138 ~~~~v~~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~-~~~~~~~~g~~--~v~~~~~~~~~~~l~----~~~--~~~~~v 1208 (1466)
.+++ + + +.|.++++ .+.||+||+|||+. |+.+++| |.+ ++++.+++....+-. ..+ -.+++|
T Consensus 80 ~~v~---v-~---~~v~~~~~-~~~~d~lViAtG~~~~~~~~ip-G~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~v 150 (456)
T 1lqt_A 80 GNVV---V-G---EHVQPGEL-SERYDAVIYAVGAQSDRMLNIP-GEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARA 150 (456)
T ss_dssp ESCC---B-T---TTBCHHHH-HHHSSEEEECCCCCEECCCCCT-TTTSTTEEEHHHHHHHHTTCGGGTTCCCCCCSSEE
T ss_pred eeEE---E-C---CEEEECCC-eEeCCEEEEeeCCCCCCCCCCC-CCCCCCcEEHHHHHhhhhcCcccccchhhcCCCEE
Confidence 8853 4 3 34666665 58899999999997 7888898 876 777765442211100 111 147999
Q ss_pred EEEcCCHHHHHHHHHHhcC--------------------C-CeEEEEcCCCcCCccccc------------------HH-
Q psy2951 1209 VVIGSSFIGMEAAAFCASK--------------------V-KSVTVVGRGAVPFQESLG------------------KE- 1248 (1466)
Q Consensus 1209 vVvG~g~~g~e~a~~l~~~--------------------g-~~v~vv~~~~~~~~~~~~------------------~~- 1248 (1466)
+|||+|++|+|+|..|.+. + .+|+++.|....+..... ++
T Consensus 151 vVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~ 230 (456)
T 1lqt_A 151 VVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAEL 230 (456)
T ss_dssp EEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGG
T ss_pred EEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHh
Confidence 9999999999999999874 5 499999998744321100 11
Q ss_pred -----------------HHHHHHHHHHh------CCcEEEcCceEEEEEecCCCcEEEEEcC----------------CC
Q psy2951 1249 -----------------VGERITKLFES------KGVKFVMKANVSSFEKNEKNDVTAANLD----------------NG 1289 (1466)
Q Consensus 1249 -----------------~~~~l~~~~~~------~gv~~~~~~~v~~i~~~~~g~~~~v~l~----------------~g 1289 (1466)
+.+.+.+.+++ +||+++++..+.++. .+ +++..|++. +|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~-~~-~~v~~v~~~~~~~~~~~~~~~~~~~~g 308 (456)
T 1lqt_A 231 DGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIK-GK-RKVERIVLGRNELVSDGSGRVAAKDTG 308 (456)
T ss_dssp TTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEE-CS-SSCCEEEEEEEEEEECSSSSEEEEEEE
T ss_pred ccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEe-cC-CcEeEEEEEEEEecCCCcccccccCCC
Confidence 13445555555 799999999999998 33 454445543 35
Q ss_pred --CeeecCEEEEeeccccCccccccCCceeeCCCeEEeCCCcc-ccCCCEEEecccccCCCccCCCceeeeecHHHHHHH
Q psy2951 1290 --TTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLE-TNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYH 1366 (1466)
Q Consensus 1290 --~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~-t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~q 1366 (1466)
++++||+|++++|+.|++ + .|++++.+|++.+|+++| |+.|+|||+|||++.|... +..|..|
T Consensus 309 ~~~~i~~d~vi~a~G~~p~~-l---~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~~~----------i~~a~~~ 374 (456)
T 1lqt_A 309 EREELPAQLVVRSVGYRGVP-T---PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGV----------IGTNKKD 374 (456)
T ss_dssp EEEEEECSEEEECSCEECCC-C---TTSCCBTTTTBCCEETTEETTCSSEEECTHHHHCSCSC----------TTHHHHH
T ss_pred ceEEEEcCEEEEccccccCC-C---CCCcccCCCCeeECCCCcCCCCCCEEEEeccCCCCchh----------HHHHHHH
Confidence 468999999999999997 3 578888888899999999 7899999999999876542 1469999
Q ss_pred HHHHHHHhcCC
Q psy2951 1367 GRIAALNMVEK 1377 (1466)
Q Consensus 1367 a~~aa~~i~g~ 1377 (1466)
|+.+|.+|++.
T Consensus 375 g~~~a~~i~~~ 385 (456)
T 1lqt_A 375 AQDTVDTLIKN 385 (456)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999863
No 167
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.94 E-value=1.7e-26 Score=304.24 Aligned_cols=277 Identities=13% Similarity=0.129 Sum_probs=209.1
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc--cCcccccccChhhhcc-CCcEEEcCCeE
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD--IKADSILLRTEEFYKD-NDIHVIKGKKI 1142 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~-~~v~~~~~~~v 1142 (1466)
.++|||||||+||++||..|++.|+ +|+|||++++++......++... ....++.....+.+.+ .+++++.+++|
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~--~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V 205 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGA--RVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTV 205 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC--CEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC--cEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEE
Confidence 4689999999999999999999998 99999998876522111111111 0111111111122334 48999999999
Q ss_pred EEeecCCCCeEEe-----------------cCCcEEecCeEEEecCCCCCcCCCCCCCC--cEEEecCHHHHHhhhcccC
Q psy2951 1143 ISDSELNEKKIKL-----------------QDGTSIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHIT 1203 (1466)
Q Consensus 1143 ~~i~d~~~~~v~~-----------------~~g~~~~yd~lvlAtG~~~~~~~~~~g~~--~v~~~~~~~~~~~l~~~~~ 1203 (1466)
..+ +..++...+ .++.++.||+||||||+.|+.+++| |.+ ++++.++..+..+.. ...
T Consensus 206 ~~i-~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ip-G~~~~gv~~~~~~~~~l~~~-~~~ 282 (965)
T 2gag_A 206 FGS-YDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFE-NNDRPGIMLAGAVRSYLNRY-GVR 282 (965)
T ss_dssp EEE-ETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCB-TCCSTTEEEHHHHHHHHHTT-CEE
T ss_pred Eee-ecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCC-CCCCCCEEEhHHHHHHHHhc-CCC
Confidence 998 765432111 1223689999999999999999999 876 788776555442211 123
Q ss_pred CCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecC-CCcEE
Q psy2951 1204 PESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNE-KNDVT 1282 (1466)
Q Consensus 1204 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~-~g~~~ 1282 (1466)
++++|+|||+|++|+|+|..|++.|.+|+++++.+.++. . .+.+++.||++++++.+++++ .+ ++++.
T Consensus 283 ~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~-----~-----~~~l~~~GV~v~~~~~v~~i~-~~~~~~v~ 351 (965)
T 2gag_A 283 AGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA-----A-----AAQAVADGVQVISGSVVVDTE-ADENGELS 351 (965)
T ss_dssp SCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH-----H-----HHHHHHTTCCEEETEEEEEEE-ECTTSCEE
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch-----h-----HHHHHhCCeEEEeCCEeEEEe-ccCCCCEE
Confidence 478999999999999999999999999999999986653 1 456889999999999999998 42 45666
Q ss_pred EEEcCC-------C--CeeecCEEEEeeccccCccccccCCceeeCCCeEEeCCCcc-----ccCCCEEEecccccCCCc
Q psy2951 1283 AANLDN-------G--TTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLE-----TNVPGVYAGGDIAYAPLH 1348 (1466)
Q Consensus 1283 ~v~l~~-------g--~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~-----t~~~~v~a~GD~a~~p~~ 1348 (1466)
.|.+.+ | +++++|.|++++|..|++++++.. +|+|.+|++++ |+.|+|||+|||+..+..
T Consensus 352 ~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~------~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~l 425 (965)
T 2gag_A 352 AIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQR------QGKLDWDTTIHAFVPADAVANQHLAGAMTGRLDT 425 (965)
T ss_dssp EEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHT------TCCEEEETTTTEEEECSCCTTEEECGGGGTCCSH
T ss_pred EEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHhC------CCcEEEcCcccccccCCCCCCEEEEEecCCchhH
Confidence 677764 5 689999999999999999987654 35688998887 789999999999976532
Q ss_pred cCCCceeeeecHHHHHHHHHHHHHHhcC
Q psy2951 1349 SFYNKNASIGHYQLAQYHGRIAALNMVE 1376 (1466)
Q Consensus 1349 ~~~~~~~~~~~~~~A~~qa~~aa~~i~g 1376 (1466)
..|..||+.||.+|++
T Consensus 426 ------------~~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 426 ------------ASALSTGAATGAAAAT 441 (965)
T ss_dssp ------------HHHHHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHHHHHHHHH
Confidence 5799999999999985
No 168
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.93 E-value=3.3e-26 Score=281.19 Aligned_cols=253 Identities=17% Similarity=0.204 Sum_probs=198.7
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc---cCcccccccChhhhccCCcEEEcCCeE
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD---IKADSILLRTEEFYKDNDIHVIKGKKI 1142 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~v 1142 (1466)
+++|||||||+||++||..|++. . +|+|||+++++++.....+.... ....++.....+.+ ..+++++.+++|
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~--~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v 183 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-L--TVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSA 183 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-C--CEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEE
T ss_pred cCCEEEECccHHHHHHHHHHHhc-C--CEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEE
Confidence 46899999999999999999998 6 99999999988876654332211 01111111112223 568999999999
Q ss_pred EEeecCCCCeEEe---cCCc--EEecCeEEEecCCCCCcCCCCCCCC--cEEEecCHHHHHhhhcc--cCCCCeEEEEcC
Q psy2951 1143 ISDSELNEKKIKL---QDGT--SIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPH--ITPESNVVVIGS 1213 (1466)
Q Consensus 1143 ~~i~d~~~~~v~~---~~g~--~~~yd~lvlAtG~~~~~~~~~~g~~--~v~~~~~~~~~~~l~~~--~~~~~~vvVvG~ 1213 (1466)
..+ +...+.+.+ +++. .+.||+||+|||+.|+.++++ |.+ +++... ++..+.+. ..++++++|+|+
T Consensus 184 ~~i-~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~~~-g~~~~gv~~~~---~~~~~~~~~~~~~~~~vvViGg 258 (493)
T 1y56_A 184 LGV-FDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTMLFE-NNDMPGVFRRD---FALEVMNVWEVAPGRKVAVTGS 258 (493)
T ss_dssp CCC-EECSSSEEEEEEETTEEEEEEESCEEECCCEEECCCCCT-TTTSTTEEEHH---HHHHHHHTSCBCSCSEEEEEST
T ss_pred EEE-EcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCCCCC-CCCCCCEEEcH---HHHHHHHhcccCCCCEEEEECC
Confidence 999 877665433 4454 689999999999999999898 876 787654 44444433 345799999999
Q ss_pred CHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeee
Q psy2951 1214 SFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIP 1293 (1466)
Q Consensus 1214 g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~ 1293 (1466)
|++|+| +.++++||++++++.|++++ .+ +++..|.+.+|++++
T Consensus 259 G~~gle-----------------------------------~~l~~~GV~v~~~~~v~~i~-~~-~~v~~v~~~~g~~i~ 301 (493)
T 1y56_A 259 KADEVI-----------------------------------QELERWGIDYVHIPNVKRVE-GN-EKVERVIDMNNHEYK 301 (493)
T ss_dssp THHHHH-----------------------------------HHHHHHTCEEEECSSEEEEE-CS-SSCCEEEETTCCEEE
T ss_pred CHHHHH-----------------------------------HHHHhCCcEEEeCCeeEEEe-cC-CceEEEEeCCCeEEE
Confidence 999998 45678899999999999998 33 456667889999999
Q ss_pred cCEEEEeeccccCccccccCCcee--eCCCeEE-eCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHH
Q psy2951 1294 ADLVIVGIGTVLNTNYLDGKGVEL--NGQKAVV-VNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIA 1370 (1466)
Q Consensus 1294 ~D~vv~a~G~~p~~~~~~~~gl~~--~~~G~i~-vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~a 1370 (1466)
+|.||+++|..|++++++.+|+.+ +++|++. +|++++ +.|+|||+|||+..+ ++..|..||++|
T Consensus 302 aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i~~vd~~~~-s~~~vya~GD~~~~~------------~~~~A~~~g~~a 368 (493)
T 1y56_A 302 VDALIFADGRRPDINPITQAGGKLRFRRGYYSPVLDEYHR-IKDGIYVAGSAVSIK------------PHYANYLEGKLV 368 (493)
T ss_dssp CSEEEECCCEEECCHHHHHTTCCEEEETTEEEECCCTTSE-EETTEEECSTTTCCC------------CHHHHHHHHHHH
T ss_pred eCEEEECCCcCcCchHHHhcCCCccccCCceeeccccccC-cCCCEEEEeccCCcc------------CHHHHHHHHHHH
Confidence 999999999999999999988765 5678887 899999 899999999998753 247899999999
Q ss_pred HHHhcCC
Q psy2951 1371 ALNMVEK 1377 (1466)
Q Consensus 1371 a~~i~g~ 1377 (1466)
|.+|++.
T Consensus 369 a~~i~~~ 375 (493)
T 1y56_A 369 GAYILKE 375 (493)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999863
No 169
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.93 E-value=2e-26 Score=294.58 Aligned_cols=260 Identities=20% Similarity=0.246 Sum_probs=194.2
Q ss_pred cCCCCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcc--cCcccccccCHhHhhhCCcEEEE
Q psy2951 590 LSSGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD--IKADSILLRTEEFYKDNDIHVIK 667 (1466)
Q Consensus 590 ~~~~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~gv~~~~ 667 (1466)
.+...+++|+||||||||++||..|+++|++ |+++|+++.+++.... ...+. ....++..++..++++.+++++.
T Consensus 368 ~~~~~~~~vvIIGgG~AGl~aA~~l~~~g~~--V~lie~~~~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 444 (671)
T 1ps9_A 368 LPAVQKKNLAVVGAGPAGLAFAINAAARGHQ--VTLFDAHSEIGGQFNI-AKQIPGKEEFYETLRYYRRMIEVTGVTLKL 444 (671)
T ss_dssp CSCSSCCEEEEECCSHHHHHHHHHHHTTTCE--EEEEESSSSSCTTHHH-HTTSTTCTTHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCCCeEEEECCCHHHHHHHHHHHhCCCe--EEEEeCCCCCCCeeec-cccCCCHHHHHHHHHHHHHHHHHcCCEEEe
Confidence 3445678999999999999999999999987 8999998766543211 11111 11123334455667778999999
Q ss_pred ceEEEEeccccccEEEccCCCEE-ecCEEEEcCCCCCCcCCCCCCCC--cEEEecCHHHHHhhcccCCCCCcEEEECCCh
Q psy2951 668 GKKIISDSELNEKKIKLQDGTSI-DFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGSSF 744 (1466)
Q Consensus 668 ~~~v~~i~~~~~~~v~~~~~~~~-~~d~lviAtG~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~ 744 (1466)
++.|... .+ .||+||||||++|+.|+++ |.+ ++++. .+. +......+++|+|||+|+
T Consensus 445 ~~~v~~~--------------~~~~~d~lviAtG~~p~~~~i~-G~~~~~v~~~---~~~--l~~~~~~~~~VvVIGgG~ 504 (671)
T 1ps9_A 445 NHTVTAD--------------QLQAFDETILASGIVPRTPPID-GIDHPKVLSY---LDV--LRDKAPVGNKVAIIGCGG 504 (671)
T ss_dssp SCCCCSS--------------SSCCSSEEEECCCEEECCCCCB-TTTSTTEEEH---HHH--HTSCCCCCSEEEEECCHH
T ss_pred CcEecHH--------------HhhcCCEEEEccCCCcCCCCCC-CCCCCcEeeH---HHH--hhCCCCCCCeEEEECCCh
Confidence 9854221 23 8999999999999999998 876 45533 232 233334689999999999
Q ss_pred HHHHHHHHHhccC-------------------------------------CeEEEEeecCccCccccCHHHHHHHHHHHH
Q psy2951 745 IGMEAAAFCASKV-------------------------------------KSVTVVGRGAVPFQESLGKEVGERITKLFE 787 (1466)
Q Consensus 745 ~g~e~A~~l~~~g-------------------------------------~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~ 787 (1466)
+|+|+|..|++.| .+|+++.+.+..+...+++.....+.+.|+
T Consensus 505 ~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~ 584 (671)
T 1ps9_A 505 IGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLL 584 (671)
T ss_dssp HHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHH
Confidence 9999999999876 356777777766656667777778889999
Q ss_pred hcCcEEEccceEEEEEecCCCceEEEECCCC--cEEecCEEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCe
Q psy2951 788 SKGVKFVMKANVSSFEKNEKNDVTAANLDNG--TTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGV 865 (1466)
Q Consensus 788 ~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~i 865 (1466)
++||+++++.++++++. ++ + .+. .+| +++++|.||+|+|++|++++++.+ +...++|
T Consensus 585 ~~GV~v~~~~~v~~i~~--~~-v-~~~-~~G~~~~i~~D~Vi~a~G~~p~~~l~~~l----------------~~~g~~v 643 (671)
T 1ps9_A 585 SRGVKMIPGVSYQKIDD--DG-L-HVV-INGETQVLAVDNVVICAGQEPNRALAQPL----------------IDSGKTV 643 (671)
T ss_dssp HTTCEEECSCEEEEEET--TE-E-EEE-ETTEEEEECCSEEEECCCEEECCTTHHHH----------------HTTTCCE
T ss_pred hcCCEEEeCcEEEEEeC--Ce-E-EEe-cCCeEEEEeCCEEEECCCccccHHHHHHH----------------HhcCCCE
Confidence 99999999999999982 22 2 232 566 579999999999999998887642 1123789
Q ss_pred EEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHh
Q psy2951 866 YAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNM 903 (1466)
Q Consensus 866 ya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i 903 (1466)
|++|||+..... .+..|++||..+|.+|
T Consensus 644 ~aiGD~~~~~~~----------~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 644 HLIGGCDVAMEL----------DARRAIAQGTRLALEI 671 (671)
T ss_dssp EECGGGTCCSSC----------CHHHHHHHHHHHHHHC
T ss_pred EEECCcCccCch----------hHHHHHHHHHHHHHhC
Confidence 999999876432 3578999999999986
No 170
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.93 E-value=1.9e-25 Score=275.00 Aligned_cols=299 Identities=14% Similarity=0.077 Sum_probs=196.4
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCC---ccEEEEcCCCCCCCCCCccchhcc--------------------------
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFT---GKLYFITDENFLPYDRVKLSKQLD-------------------------- 644 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~---~~v~~~~~~~~~~~~~~~~~~~~~-------------------------- 644 (1466)
..+||+||||||||+++|..|+++|.+ ..|+++|+++.+++....+.....
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~ 108 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLH 108 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhh
Confidence 457999999999999999999999932 348999988765543321100000
Q ss_pred ---------------cCcccccccCHhHhhhCCcEEEEceEEEEecccc---cc----EEEccCCC----EEecCEEEEc
Q psy2951 645 ---------------IKADSILLRTEEFYKDNDIHVIKGKKIISDSELN---EK----KIKLQDGT----SIDFTKIYLA 698 (1466)
Q Consensus 645 ---------------~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~---~~----~v~~~~~~----~~~~d~lviA 698 (1466)
....++..++....++.+++++++++|+.+ +.. .. .|.+.++. ++.||+||+|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i-~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlA 187 (463)
T 3s5w_A 109 KHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRI-EPMLSAGQVEALRVISRNADGEELVRTTRALVVS 187 (463)
T ss_dssp HTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEE-EEEEETTEEEEEEEEEEETTSCEEEEEESEEEEC
T ss_pred hcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEE-EEecCCCceEEEEEEEecCCCceEEEEeCEEEEC
Confidence 011122223333445668999999999988 543 32 56666665 8999999999
Q ss_pred CCCCCCcCCCCCCCC---cEEEecCHHH-HHhhcccCCCCCcEEEECCChHHHHHHHHHhcc--CCeEEEEeecCccCcc
Q psy2951 699 TGSSPRTISQADGVN---KVFYLRTVED-ANNIAPHITPESNVVVIGSSFIGMEAAAFCASK--VKSVTVVGRGAVPFQE 772 (1466)
Q Consensus 699 tG~~~~~~~~~~g~~---~~~~~~~~~~-~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~--g~~V~lv~~~~~~~~~ 772 (1466)
||+.|..|+..++.. .+++.....+ ...+.....++++|+|||+|.+|+|+|..|++. +.+|++++|.+.+++.
T Consensus 188 tG~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~ 267 (463)
T 3s5w_A 188 PGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPA 267 (463)
T ss_dssp CCCEECCCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBC
T ss_pred CCCCCCCcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCc
Confidence 999888776321332 2344333322 222211112589999999999999999999999 9999999999865321
Q ss_pred -------------------ccCHHHHHHHHHHHHh--------------------------cCcEEEccceEEEEEecCC
Q psy2951 773 -------------------SLGKEVGERITKLFES--------------------------KGVKFVMKANVSSFEKNEK 807 (1466)
Q Consensus 773 -------------------~~~~~~~~~~~~~l~~--------------------------~gv~~~~~~~v~~i~~~~~ 807 (1466)
.++.+....+.+.+.. .||+++++++|++++..++
T Consensus 268 ~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~ 347 (463)
T 3s5w_A 268 DDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQ 347 (463)
T ss_dssp CCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETT
T ss_pred cCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCC
Confidence 1222222222222222 6999999999999985433
Q ss_pred CceEEEECC---CCc--EEecCEEEEccccccC--ccccccCCceeeCCCcEEeCCCCCCC-----CCCeEEeccccccC
Q psy2951 808 NDVTAANLD---NGT--TIPADLVIVGIGTVLN--TNYLDGKGVELNGQKAVVVNEYLETN-----VPGVYAGGDIAYAP 875 (1466)
Q Consensus 808 ~~~~~v~~~---~g~--~i~~D~vi~a~G~~p~--~~~~~~~gl~~~~~G~i~vd~~~~t~-----~~~iya~GD~~~~~ 875 (1466)
. ..+.+. +|+ ++++|.||+|||++|+ .++++.+...+ |.+.||+++++. .|+|||+|||....
T Consensus 348 -~-~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~~---g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~ 422 (463)
T 3s5w_A 348 -G-IELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYL---GDHEIGRDYRLQTDERCKVAIYAQGFSQASH 422 (463)
T ss_dssp -E-EEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGGB---C--CCCTTSBCCBCTTBCSEEEESSCCHHHH
T ss_pred -E-EEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHHh---CCcccCcccccccCCCCCCeEEEcCCCcccC
Confidence 2 334443 565 4999999999999999 66776554333 789999999864 46799999998643
Q ss_pred CcccCCceeeeccHHHHHHHHHHHHHHhc
Q psy2951 876 LHSFYNKNASIGHYQLAQYHGRIAALNMV 904 (1466)
Q Consensus 876 ~~~~~~~~~~~~~~~~A~~~g~~aA~~i~ 904 (1466)
... .......|.+++.+++..+-
T Consensus 423 g~~------~~~l~~~a~r~~~i~~~~~~ 445 (463)
T 3s5w_A 423 GLS------DTLLSVLPVRAEEISGSLYQ 445 (463)
T ss_dssp CTT------TTSSTTHHHHHHHHHHHHHH
T ss_pred CcC------ccchhHHHHHHHHHHHHHHh
Confidence 321 01233578899988876653
No 171
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.93 E-value=1.1e-25 Score=277.16 Aligned_cols=298 Identities=14% Similarity=0.083 Sum_probs=193.9
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCC---CcEEEEcCCCCCCCCCCCCchhhcc-------------------------
Q psy2951 1065 NKDTFIVVGGGPSGATCVETLRQNGFT---GKLYFITDENFLPYDRVKLSKQLDI------------------------- 1116 (1466)
Q Consensus 1065 ~~~~vvIVG~G~aGl~aA~~L~~~g~~---~~i~li~~~~~~~~~~~~l~~~~~~------------------------- 1116 (1466)
.+.+|||||||+||+++|..|++.|.. .+|+|||+++.+++....+......
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~ 108 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLH 108 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhh
Confidence 346899999999999999999999932 3999999998766544322100000
Q ss_pred ----------------CcccccccChhhhccCCcEEEcCCeEEEeecCC---CC----eEEecCCc----EEecCeEEEe
Q psy2951 1117 ----------------KADSILLRTEEFYKDNDIHVIKGKKIISDSELN---EK----KIKLQDGT----SIDFTKIYLA 1169 (1466)
Q Consensus 1117 ----------------~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~d~~---~~----~v~~~~g~----~~~yd~lvlA 1169 (1466)
....+......+.+..+++++++++|+.+ +.. .+ +|.+.++. ++.||+||+|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i-~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlA 187 (463)
T 3s5w_A 109 KHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRI-EPMLSAGQVEALRVISRNADGEELVRTTRALVVS 187 (463)
T ss_dssp HTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEE-EEEEETTEEEEEEEEEEETTSCEEEEEESEEEEC
T ss_pred hcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEE-EEecCCCceEEEEEEEecCCCceEEEEeCEEEEC
Confidence 00000000012234558899999999999 765 43 67777776 8999999999
Q ss_pred cCCCCCcCCCCCCCCc---EEEecCHHH-HHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcC--CCeEEEEcCCCcCCcc
Q psy2951 1170 TGSSPRTISQADGVNK---VFYLRTVED-ANNIAPHITPESNVVVIGSSFIGMEAAAFCASK--VKSVTVVGRGAVPFQE 1243 (1466)
Q Consensus 1170 tG~~~~~~~~~~g~~~---v~~~~~~~~-~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~--g~~v~vv~~~~~~~~~ 1243 (1466)
||+.|+.|+...++.+ +++...+.+ ...+......+++|+|||+|.+|+|+|..|++. +.+|++++|.+..++.
T Consensus 188 tG~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~ 267 (463)
T 3s5w_A 188 PGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPA 267 (463)
T ss_dssp CCCEECCCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBC
T ss_pred CCCCCCCcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCc
Confidence 9998887762213332 344333322 222322223589999999999999999999999 8999999998865331
Q ss_pred -------------------cccHHHHHHHHHHHHh--------------------------CCcEEEcCceEEEEEecCC
Q psy2951 1244 -------------------SLGKEVGERITKLFES--------------------------KGVKFVMKANVSSFEKNEK 1278 (1466)
Q Consensus 1244 -------------------~~~~~~~~~l~~~~~~--------------------------~gv~~~~~~~v~~i~~~~~ 1278 (1466)
.++++....+.+.++. .||+++++++|++++ .++
T Consensus 268 ~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~-~~~ 346 (463)
T 3s5w_A 268 DDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERAT-ATA 346 (463)
T ss_dssp CCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEE-EET
T ss_pred cCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEE-ecC
Confidence 1112222222222221 699999999999998 333
Q ss_pred CcEEEEEcC---CCCe--eecCEEEEeeccccC--ccccccCCceeeCCCeEEeCCCcccc-----CCCEEEecccccCC
Q psy2951 1279 NDVTAANLD---NGTT--IPADLVIVGIGTVLN--TNYLDGKGVELNGQKAVVVNEYLETN-----VPGVYAGGDIAYAP 1346 (1466)
Q Consensus 1279 g~~~~v~l~---~g~~--i~~D~vv~a~G~~p~--~~~~~~~gl~~~~~G~i~vd~~~~t~-----~~~v~a~GD~a~~p 1346 (1466)
....|.+. +|++ +++|+||+|||+.|+ .+++....... |++.||+++++. .|+|||+|||+...
T Consensus 347 -~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~~---g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~ 422 (463)
T 3s5w_A 347 -QGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYL---GDHEIGRDYRLQTDERCKVAIYAQGFSQASH 422 (463)
T ss_dssp -TEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGGB---C--CCCTTSBCCBCTTBCSEEEESSCCHHHH
T ss_pred -CEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHHh---CCcccCcccccccCCCCCCeEEEcCCCcccC
Confidence 33446655 6764 899999999999999 66776543332 679999999875 45699999998632
Q ss_pred CccCCCceeeeecHHHHHHHHHHHHHHh
Q psy2951 1347 LHSFYNKNASIGHYQLAQYHGRIAALNM 1374 (1466)
Q Consensus 1347 ~~~~~~~~~~~~~~~~A~~qa~~aa~~i 1374 (1466)
... ...+. ..|..++++++..+
T Consensus 423 g~~--~~~l~----~~a~r~~~i~~~~~ 444 (463)
T 3s5w_A 423 GLS--DTLLS----VLPVRAEEISGSLY 444 (463)
T ss_dssp CTT--TTSST----THHHHHHHHHHHHH
T ss_pred CcC--ccchh----HHHHHHHHHHHHHH
Confidence 211 00111 45677777776544
No 172
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.92 E-value=4.8e-25 Score=268.98 Aligned_cols=273 Identities=14% Similarity=0.138 Sum_probs=194.5
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccc---------------------------------
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLS--------------------------------- 640 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~--------------------------------- 640 (1466)
..++|+||||||||+++|..|++.|....|+++|+.+.+++......
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 35899999999999999999999998445889998754321110000
Q ss_pred -hhcc----------------------cCcccccccCHhHhhhCCcEEEEceEEEEeccccc--cEEEccC---CC---E
Q psy2951 641 -KQLD----------------------IKADSILLRTEEFYKDNDIHVIKGKKIISDSELNE--KKIKLQD---GT---S 689 (1466)
Q Consensus 641 -~~~~----------------------~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~--~~v~~~~---~~---~ 689 (1466)
..+. .....+..++..+.++.+..++++++|+.+ +... ..|++.+ |. +
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v-~~~~~~~~V~~~~~~~G~~~~~ 163 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDI-EKKDGSWVVTYKGTKAGSPISK 163 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEE-EEETTEEEEEEEESSTTCCEEE
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEE-EeCCCeEEEEEeecCCCCeeEE
Confidence 0000 001122223334445557788899999988 4433 4666654 65 7
Q ss_pred EecCEEEEcCCC--CCCcCCCCCCCC--------cEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCe
Q psy2951 690 IDFTKIYLATGS--SPRTISQADGVN--------KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS 759 (1466)
Q Consensus 690 ~~~d~lviAtG~--~~~~~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~ 759 (1466)
+.||+||+|||. .|+.|+++ |.+ .+++.....+... ..+++|+|||+|++|+|+|..|++.+.+
T Consensus 164 ~~~d~VVvAtG~~s~p~~p~i~-G~~~~~~~~~g~v~~~~~~~~~~~-----~~~k~VvVvG~G~sg~e~A~~l~~~~~~ 237 (447)
T 2gv8_A 164 DIFDAVSICNGHYEVPYIPNIK-GLDEYAKAVPGSVLHSSLFREPEL-----FVGESVLVVGGASSANDLVRHLTPVAKH 237 (447)
T ss_dssp EEESEEEECCCSSSSBCBCCCB-THHHHHHHSTTSEEEGGGCCCGGG-----GTTCCEEEECSSHHHHHHHHHHTTTSCS
T ss_pred EEeCEEEECCCCCCCCCCCCCC-ChhhhhccCCccEEEecccCChhh-----cCCCEEEEEccCcCHHHHHHHHHHHhCC
Confidence 999999999997 88899888 864 1443333222211 2489999999999999999999999999
Q ss_pred -EEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcE-EecCEEEEccccccCcc
Q psy2951 760 -VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTT-IPADLVIVGIGTVLNTN 837 (1466)
Q Consensus 760 -V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~-i~~D~vi~a~G~~p~~~ 837 (1466)
|++++|.+.. +++.||++ ...|+++.. ++. .|.+.||++ +++|.||+|||++|+++
T Consensus 238 ~V~l~~r~~~~----------------l~~~~i~~--~~~v~~~~~-~~~---~v~~~dG~~~~~~D~vi~atG~~~~~~ 295 (447)
T 2gv8_A 238 PIYQSLLGGGD----------------IQNESLQQ--VPEITKFDP-TTR---EIYLKGGKVLSNIDRVIYCTGYLYSVP 295 (447)
T ss_dssp SEEEECTTCCS----------------CBCSSEEE--ECCEEEEET-TTT---EEEETTTEEECCCSEEEECCCBCCCCC
T ss_pred cEEEEeCCCCc----------------CCCCCeEE--ecCeEEEec-CCC---EEEECCCCEeccCCEEEECCCCCcCCC
Confidence 9999998754 34567774 567888862 222 577888886 79999999999999999
Q ss_pred c-----cccCCceeeCCCcEEeCCCCC---CCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhccCC
Q psy2951 838 Y-----LDGKGVELNGQKAVVVNEYLE---TNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK 907 (1466)
Q Consensus 838 ~-----~~~~gl~~~~~G~i~vd~~~~---t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~~~ 907 (1466)
+ ++..+..+..++.+.++.+.+ +++|+||++||+.... .++.|..||+.+|++|.|+.
T Consensus 296 ~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~------------~~~~a~~qa~~~a~~~~g~~ 361 (447)
T 2gv8_A 296 FPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVV------------PFPTSQAQAAFLARVWSGRL 361 (447)
T ss_dssp CHHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEESSCCBSSC------------HHHHHHHHHHHHHHHHTTSS
T ss_pred CCcccccccccCceecCCCcccccccccccCCCCcEEEEecccccc------------CchHHHHHHHHHHHHHcCCC
Confidence 9 776533333345555665555 6899999999987542 35789999999999999863
No 173
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.92 E-value=7e-26 Score=290.06 Aligned_cols=273 Identities=18% Similarity=0.156 Sum_probs=199.2
Q ss_pred CCCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhc--cCcccccccChhhhccC-CcEEEcCC
Q psy2951 1064 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLD--IKADSILLRTEEFYKDN-DIHVIKGK 1140 (1466)
Q Consensus 1064 ~~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~-~v~~~~~~ 1140 (1466)
...++|||||||+||++||..|+++|+ +|+|||+++.+++.... ...+. .....+.......+.+. ++++++++
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~--~V~liE~~~~~GG~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~ 465 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGY--DVVLAEAGRDLGGRVTQ-ESALPGLSAWGRVKEYREAVLAELPNVEIYRES 465 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTC--EEEEECSSSSSCTHHHH-HHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSC
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCC--eEEEEecCCCCCCEeee-ccCCCchhHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 346799999999999999999999998 99999998865532110 00000 11112222223445555 88888887
Q ss_pred eEEEeecCCCCeEEecCCcEEecCeEEEecCCCC--------CcCCCCCCCCcEEEecCHHHHHhhhcccCCCCeEEEEc
Q psy2951 1141 KIISDSELNEKKIKLQDGTSIDFTKIYLATGSSP--------RTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIG 1212 (1466)
Q Consensus 1141 ~v~~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~--------~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~vvVvG 1212 (1466)
+++ .+++.++.||+||+|||+.| ..++++ |.+....+ +..+.. ......+++|+|||
T Consensus 466 ~v~-----------~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~-G~~~~~v~-~~~~~l--~~~~~~g~~VvViG 530 (690)
T 3k30_A 466 PMT-----------GDDIVEFGFEHVITATGATWRTDGVARFHTTALP-IAEGMQVL-GPDDLF--AGRLPDGKKVVVYD 530 (690)
T ss_dssp CCC-----------HHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCC-BCTTSEEE-CHHHHH--TTCCCSSSEEEEEE
T ss_pred eec-----------HHHHhhcCCCEEEEcCCCccccccccccCCCCCC-CCCCCcEE-cHHHHh--CCCCCCCCEEEEEc
Confidence 432 23445688999999999984 467777 77622222 344443 33455688999999
Q ss_pred --CCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCC
Q psy2951 1213 --SSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGT 1290 (1466)
Q Consensus 1213 --~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~ 1290 (1466)
+|++|+|+|..|++.|.+|+++++.+..+....++.....+.+.++++||+++++++|++++ .++..+..+...+++
T Consensus 531 ~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~-~~~~~v~~~~~~~~~ 609 (690)
T 3k30_A 531 DDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVG-AGGVTVRDTYASIER 609 (690)
T ss_dssp CSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEE-TTEEEEEETTTCCEE
T ss_pred CCCCccHHHHHHHHHhCCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEE-CCeEEEEEccCCeEE
Confidence 99999999999999999999999998777655556677888999999999999999999998 332111111123567
Q ss_pred eeecCEEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHH
Q psy2951 1291 TIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIA 1370 (1466)
Q Consensus 1291 ~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~a 1370 (1466)
++++|.||+|+|..|++++++..+. .+. +|+.|+|||+|||+..+.. ..|..||+.|
T Consensus 610 ~i~aD~VV~A~G~~p~~~l~~~l~~----~~~-------~t~~~~VyaiGD~~~~~~~------------~~A~~~g~~a 666 (690)
T 3k30_A 610 ELECDAVVMVTARLPREELYLDLVA----RRD-------AGEIASVRGIGDAWAPGTI------------AAAVWSGRRA 666 (690)
T ss_dssp EEECSEEEEESCEEECCHHHHHHHH----HHH-------HTSCSEEEECGGGTSCBCH------------HHHHHHHHHH
T ss_pred EEECCEEEECCCCCCChHHHHHHhh----hhc-------ccCCCCEEEEeCCCchhhH------------HHHHHHHHHH
Confidence 8999999999999999988765321 121 7889999999999875432 5699999999
Q ss_pred HHHhcCCC
Q psy2951 1371 ALNMVEKK 1378 (1466)
Q Consensus 1371 a~~i~g~~ 1378 (1466)
|.||++..
T Consensus 667 a~~i~~~l 674 (690)
T 3k30_A 667 AEEFDAVL 674 (690)
T ss_dssp HHHTTCCC
T ss_pred HHHHHhhc
Confidence 99999863
No 174
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.92 E-value=1.7e-25 Score=274.87 Aligned_cols=255 Identities=18% Similarity=0.215 Sum_probs=193.0
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhc-cc--CcccccccCHhHhhhCCcEEEEceEE
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQL-DI--KADSILLRTEEFYKDNDIHVIKGKKI 671 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~gv~~~~~~~v 671 (1466)
.+||+|||||+||++||+.|+++ ++ |+++|+++.+++......... +. ...++..++.+.+ +.+++++.+++|
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~--V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v 183 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LT--VALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSA 183 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CC--EEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEE
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CC--EEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEE
Confidence 46899999999999999999998 55 999999887766543322111 11 1222223333333 569999999988
Q ss_pred EEeccccccEE--Ec-cCCC--EEecCEEEEcCCCCCCcCCCCCCCC--cEEEecCHHHHHhhcccCCCCCcEEEECCCh
Q psy2951 672 ISDSELNEKKI--KL-QDGT--SIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGSSF 744 (1466)
Q Consensus 672 ~~i~~~~~~~v--~~-~~~~--~~~~d~lviAtG~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~ 744 (1466)
..+ +...+.+ .. .++. .+.||+||||||+.|+.|+++ |.+ +++...+.....+.. ...++++++|||+|+
T Consensus 184 ~~i-~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~~~-g~~~~gv~~~~~~~~~~~~~-~~~~~~~vvViGgG~ 260 (493)
T 1y56_A 184 LGV-FDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTMLFE-NNDMPGVFRRDFALEVMNVW-EVAPGRKVAVTGSKA 260 (493)
T ss_dssp CCC-EECSSSEEEEEEETTEEEEEEESCEEECCCEEECCCCCT-TTTSTTEEEHHHHHHHHHTS-CBCSCSEEEEESTTH
T ss_pred EEE-EcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCCCCC-CCCCCCEEEcHHHHHHHHhc-ccCCCCEEEEECCCH
Confidence 877 5444322 22 3343 689999999999999999988 876 676544333322211 124579999999999
Q ss_pred HHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecC
Q psy2951 745 IGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPAD 824 (1466)
Q Consensus 745 ~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D 824 (1466)
+|+| +.++++||+++++..+++++.+ +++..+.+++|+++++|
T Consensus 261 ~gle-----------------------------------~~l~~~GV~v~~~~~v~~i~~~--~~v~~v~~~~g~~i~aD 303 (493)
T 1y56_A 261 DEVI-----------------------------------QELERWGIDYVHIPNVKRVEGN--EKVERVIDMNNHEYKVD 303 (493)
T ss_dssp HHHH-----------------------------------HHHHHHTCEEEECSSEEEEECS--SSCCEEEETTCCEEECS
T ss_pred HHHH-----------------------------------HHHHhCCcEEEeCCeeEEEecC--CceEEEEeCCCeEEEeC
Confidence 9988 4467789999999999999832 34556778889999999
Q ss_pred EEEEccccccCccccccCCcee--eCCCcEE-eCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHH
Q psy2951 825 LVIVGIGTVLNTNYLDGKGVEL--NGQKAVV-VNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAAL 901 (1466)
Q Consensus 825 ~vi~a~G~~p~~~~~~~~gl~~--~~~G~i~-vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~ 901 (1466)
.||+|+|++|++++++.+|+++ +++|++. +|++++ +.|+|||+|||+..+ ++..|..||++||.
T Consensus 304 ~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i~~vd~~~~-s~~~vya~GD~~~~~------------~~~~A~~~g~~aa~ 370 (493)
T 1y56_A 304 ALIFADGRRPDINPITQAGGKLRFRRGYYSPVLDEYHR-IKDGIYVAGSAVSIK------------PHYANYLEGKLVGA 370 (493)
T ss_dssp EEEECCCEEECCHHHHHTTCCEEEETTEEEECCCTTSE-EETTEEECSTTTCCC------------CHHHHHHHHHHHHH
T ss_pred EEEECCCcCcCchHHHhcCCCccccCCceeeccccccC-cCCCEEEEeccCCcc------------CHHHHHHHHHHHHH
Confidence 9999999999999998888765 5788887 899999 999999999998753 34689999999999
Q ss_pred HhccC
Q psy2951 902 NMVEK 906 (1466)
Q Consensus 902 ~i~~~ 906 (1466)
+|.+.
T Consensus 371 ~i~~~ 375 (493)
T 1y56_A 371 YILKE 375 (493)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99764
No 175
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.92 E-value=7.2e-25 Score=267.36 Aligned_cols=273 Identities=14% Similarity=0.162 Sum_probs=196.1
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCC----CCCC------------------------------CCc
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLP----YDRV------------------------------KLS 1111 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~----~~~~------------------------------~l~ 1111 (1466)
.++|+|||||++|+++|..|++.|...+|+|||+++..+ |... .+.
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 578999999999999999999998767899999986432 1110 000
Q ss_pred hhhcc-------Cccc---------------ccccChhhhccCCcEEEcCCeEEEeecCCCC--eEEecC---Cc---EE
Q psy2951 1112 KQLDI-------KADS---------------ILLRTEEFYKDNDIHVIKGKKIISDSELNEK--KIKLQD---GT---SI 1161 (1466)
Q Consensus 1112 ~~~~~-------~~~~---------------~~~~~~~~~~~~~v~~~~~~~v~~i~d~~~~--~v~~~~---g~---~~ 1161 (1466)
..+.. .... +.....++.+..+..++++++|+.+ +.... .|++.+ |. ++
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v-~~~~~~~~V~~~~~~~G~~~~~~ 164 (447)
T 2gv8_A 86 RDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDI-EKKDGSWVVTYKGTKAGSPISKD 164 (447)
T ss_dssp TTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEE-EEETTEEEEEEEESSTTCCEEEE
T ss_pred hhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEE-EeCCCeEEEEEeecCCCCeeEEE
Confidence 00000 0000 0000012333446678899999999 76544 566665 66 79
Q ss_pred ecCeEEEecCC--CCCcCCCCCCCC--------cEEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCe-
Q psy2951 1162 DFTKIYLATGS--SPRTISQADGVN--------KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKS- 1230 (1466)
Q Consensus 1162 ~yd~lvlAtG~--~~~~~~~~~g~~--------~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~- 1230 (1466)
.||+||+|||+ .|+.|++| |++ .+++.+++.+...+ .+++|+|||+|++|+|+|..|++.+.+
T Consensus 165 ~~d~VVvAtG~~s~p~~p~i~-G~~~~~~~~~g~v~~~~~~~~~~~~-----~~k~VvVvG~G~sg~e~A~~l~~~~~~~ 238 (447)
T 2gv8_A 165 IFDAVSICNGHYEVPYIPNIK-GLDEYAKAVPGSVLHSSLFREPELF-----VGESVLVVGGASSANDLVRHLTPVAKHP 238 (447)
T ss_dssp EESEEEECCCSSSSBCBCCCB-THHHHHHHSTTSEEEGGGCCCGGGG-----TTCCEEEECSSHHHHHHHHHHTTTSCSS
T ss_pred EeCEEEECCCCCCCCCCCCCC-ChhhhhccCCccEEEecccCChhhc-----CCCEEEEEccCcCHHHHHHHHHHHhCCc
Confidence 99999999998 88888888 864 25554444343222 389999999999999999999999999
Q ss_pred EEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCe-eecCEEEEeeccccCccc
Q psy2951 1231 VTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTT-IPADLVIVGIGTVLNTNY 1309 (1466)
Q Consensus 1231 v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~-i~~D~vv~a~G~~p~~~~ 1309 (1466)
|+++.+.+.. +++.||.+ ...|+++. .++ . .|.+.||++ +++|.||+|||+.|+++|
T Consensus 239 V~l~~r~~~~----------------l~~~~i~~--~~~v~~~~-~~~-~--~v~~~dG~~~~~~D~vi~atG~~~~~~~ 296 (447)
T 2gv8_A 239 IYQSLLGGGD----------------IQNESLQQ--VPEITKFD-PTT-R--EIYLKGGKVLSNIDRVIYCTGYLYSVPF 296 (447)
T ss_dssp EEEECTTCCS----------------CBCSSEEE--ECCEEEEE-TTT-T--EEEETTTEEECCCSEEEECCCBCCCCCC
T ss_pred EEEEeCCCCc----------------CCCCCeEE--ecCeEEEe-cCC-C--EEEECCCCEeccCCEEEECCCCCcCCCC
Confidence 9999998744 34567764 56788887 333 2 488899987 799999999999999999
Q ss_pred -----cccCCceeeCCCeEEeCCCcc---ccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcCCCC
Q psy2951 1310 -----LDGKGVELNGQKAVVVNEYLE---TNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKKT 1379 (1466)
Q Consensus 1310 -----~~~~gl~~~~~G~i~vd~~~~---t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g~~~ 1379 (1466)
|+..+..+..++.+.++.+.+ +++|+||++||+...+ .|..|..||+.+|++|+|...
T Consensus 297 l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~------------~~~~a~~qa~~~a~~~~g~~~ 362 (447)
T 2gv8_A 297 PSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVV------------PFPTSQAQAAFLARVWSGRLK 362 (447)
T ss_dssp HHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEESSCCBSSC------------HHHHHHHHHHHHHHHHTTSSC
T ss_pred CcccccccccCceecCCCcccccccccccCCCCcEEEEecccccc------------CchHHHHHHHHHHHHHcCCCC
Confidence 876422222234455554544 6799999999986532 458999999999999999653
No 176
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.90 E-value=1.1e-23 Score=269.02 Aligned_cols=256 Identities=20% Similarity=0.255 Sum_probs=192.2
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhcc--CcccccccChhhhccCCcEEEcCCeE
Q psy2951 1065 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDI--KADSILLRTEEFYKDNDIHVIKGKKI 1142 (1466)
Q Consensus 1065 ~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~v 1142 (1466)
..++|||||||+||++||..|++.|+ +|+|||+++++++... ++..+.. ....+.....+++++.++++++++.|
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~--~V~lie~~~~~gg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 448 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGH--QVTLFDAHSEIGGQFN-IAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTV 448 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTC--EEEEEESSSSSCTTHH-HHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCC--eEEEEeCCCCCCCeee-ccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEe
Confidence 45789999999999999999999998 9999999987765421 1111110 11111111234456679999998854
Q ss_pred EEeecCCCCeEEecCCcEE-ecCeEEEecCCCCCcCCCCCCCC--cEEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHH
Q psy2951 1143 ISDSELNEKKIKLQDGTSI-DFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGSSFIGME 1219 (1466)
Q Consensus 1143 ~~i~d~~~~~v~~~~g~~~-~yd~lvlAtG~~~~~~~~~~g~~--~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e 1219 (1466)
... .+ .||+||||||++|+.|+++ |.+ ++++. .+. +......+++|+|||+|++|+|
T Consensus 449 ~~~--------------~~~~~d~lviAtG~~p~~~~i~-G~~~~~v~~~---~~~--l~~~~~~~~~VvVIGgG~~g~E 508 (671)
T 1ps9_A 449 TAD--------------QLQAFDETILASGIVPRTPPID-GIDHPKVLSY---LDV--LRDKAPVGNKVAIIGCGGIGFD 508 (671)
T ss_dssp CSS--------------SSCCSSEEEECCCEEECCCCCB-TTTSTTEEEH---HHH--HTSCCCCCSEEEEECCHHHHHH
T ss_pred cHH--------------HhhcCCEEEEccCCCcCCCCCC-CCCCCcEeeH---HHH--hhCCCCCCCeEEEECCChhHHH
Confidence 322 13 8999999999999999999 876 56654 233 3333446899999999999999
Q ss_pred HHHHHhcCCC-------------------------------------eEEEEcCCCcCCcccccHHHHHHHHHHHHhCCc
Q psy2951 1220 AAAFCASKVK-------------------------------------SVTVVGRGAVPFQESLGKEVGERITKLFESKGV 1262 (1466)
Q Consensus 1220 ~a~~l~~~g~-------------------------------------~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv 1262 (1466)
+|..|++.|. +|+++.+.+..+...+++.....+.+.++++||
T Consensus 509 ~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV 588 (671)
T 1ps9_A 509 TAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGV 588 (671)
T ss_dssp HHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCC
Confidence 9999998773 567777777777667777778888899999999
Q ss_pred EEEcCceEEEEEecCCCcEEEEEcCCC--CeeecCEEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEec
Q psy2951 1263 KFVMKANVSSFEKNEKNDVTAANLDNG--TTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGG 1340 (1466)
Q Consensus 1263 ~~~~~~~v~~i~~~~~g~~~~v~l~~g--~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~G 1340 (1466)
++++++++++++ +++ ..+. .+| +++++|.||+++|..|+++|++. + +. ..++||++|
T Consensus 589 ~v~~~~~v~~i~--~~~--v~~~-~~G~~~~i~~D~Vi~a~G~~p~~~l~~~--l--~~------------~g~~v~aiG 647 (671)
T 1ps9_A 589 KMIPGVSYQKID--DDG--LHVV-INGETQVLAVDNVVICAGQEPNRALAQP--L--ID------------SGKTVHLIG 647 (671)
T ss_dssp EEECSCEEEEEE--TTE--EEEE-ETTEEEEECCSEEEECCCEEECCTTHHH--H--HT------------TTCCEEECG
T ss_pred EEEeCcEEEEEe--CCe--EEEe-cCCeEEEEeCCEEEECCCccccHHHHHH--H--Hh------------cCCCEEEEC
Confidence 999999999998 332 1232 577 67999999999999999988764 1 11 236899999
Q ss_pred ccccCCCccCCCceeeeecHHHHHHHHHHHHHHh
Q psy2951 1341 DIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNM 1374 (1466)
Q Consensus 1341 D~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i 1374 (1466)
||+..... .+..|+.||..||.||
T Consensus 648 D~~~~~~~----------~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 648 GCDVAMEL----------DARRAIAQGTRLALEI 671 (671)
T ss_dssp GGTCCSSC----------CHHHHHHHHHHHHHHC
T ss_pred CcCccCch----------hHHHHHHHHHHHHHhC
Confidence 99876432 2588999999999986
No 177
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.89 E-value=6.1e-23 Score=253.22 Aligned_cols=282 Identities=16% Similarity=0.132 Sum_probs=192.0
Q ss_pred CCeEEEEcCchHHHHHHHHHH-HcCCCccEEEEcCCCCCCCC-------CC--ccchh-c------------c-----cC
Q psy2951 595 KDTFIVVGGGPSGATCVETLR-QNGFTGKLYFITDENFLPYD-------RV--KLSKQ-L------------D-----IK 646 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~-~~g~~~~v~~~~~~~~~~~~-------~~--~~~~~-~------------~-----~~ 646 (1466)
.+||+|||||+||+++|..|+ +.|.+ |+++|+++.+++. .. ..... . . ..
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~--v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~ 85 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLT--TVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYIT 85 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCC--EEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCC--EEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCC
Confidence 479999999999999999999 88986 8888886543311 00 00000 0 0 11
Q ss_pred cccccccCHhHhhhCCc--EEEEceEEEEeccccc----cEEEccCCCEEecCEEEEcCC--CCCCcCCCCCCCCc----
Q psy2951 647 ADSILLRTEEFYKDNDI--HVIKGKKIISDSELNE----KKIKLQDGTSIDFTKIYLATG--SSPRTISQADGVNK---- 714 (1466)
Q Consensus 647 ~~~~~~~~~~~~~~~gv--~~~~~~~v~~i~~~~~----~~v~~~~~~~~~~d~lviAtG--~~~~~~~~~~g~~~---- 714 (1466)
..++..++....++.++ +++++++|+.+ +... ..|++++|+++.||+||+||| +.|+.|++| |.+.
T Consensus 86 ~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i-~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ip-G~~~f~g~ 163 (540)
T 3gwf_A 86 QPEILEYLEDVVDRFDLRRHFKFGTEVTSA-LYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLP-GLDTFEGE 163 (540)
T ss_dssp HHHHHHHHHHHHHHTTCGGGEEESCCEEEE-EEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCT-TGGGCCSE
T ss_pred HHHHHHHHHHHHHHcCCcceeEeccEEEEE-EEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCC-CccccCCC
Confidence 23444555566777888 89999999888 4433 378888888999999999999 689999999 8761
Q ss_pred EEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccC----HHHHHHHH-------
Q psy2951 715 VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLG----KEVGERIT------- 783 (1466)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~----~~~~~~~~------- 783 (1466)
.++.... .......+|+|+|||+|.+|+|+|..|++.+.+||++.|.+..+.+..+ +...+.++
T Consensus 164 ~~~~~~~-----~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~ 238 (540)
T 3gwf_A 164 TIHTAAW-----PEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIW 238 (540)
T ss_dssp EEEGGGC-----CSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHH
T ss_pred EEEeecC-----CCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHHhccHHHH
Confidence 2222111 1122346899999999999999999999999999999999874333222 22211111
Q ss_pred ------------------------------------------------------------------HH------------
Q psy2951 784 ------------------------------------------------------------------KL------------ 785 (1466)
Q Consensus 784 ------------------------------------------------------------------~~------------ 785 (1466)
+.
T Consensus 239 ~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~ 318 (540)
T 3gwf_A 239 ERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETAR 318 (540)
T ss_dssp HHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHH
T ss_pred HHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 00
Q ss_pred ---------------------HHhcCcEEEc--cceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccCccccccC
Q psy2951 786 ---------------------FESKGVKFVM--KANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGK 842 (1466)
Q Consensus 786 ---------------------l~~~gv~~~~--~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~ 842 (1466)
+.+.+|+++. ...|++|++. .|.++||+++++|+||+|||+++++.++...
T Consensus 319 ~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~------gv~~~dG~~~~~DvIV~ATGf~~~~~~~~~~ 392 (540)
T 3gwf_A 319 KLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAK------GVVTEDGVLHELDVLVFATGFDAVDGNYRRI 392 (540)
T ss_dssp HHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSS------EEEETTCCEEECSEEEECCCBSCSSHHHHTS
T ss_pred hCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecC------eEEcCCCCEEECCEEEECCccCccccCcCcc
Confidence 1144788885 6788888832 5888999999999999999999987555433
Q ss_pred CceeeCCCcEEeCC--------C--CC-CCCCCeEEe-ccccccCCcccCCceeeeccHHHHHHHHHHHHHHhc
Q psy2951 843 GVELNGQKAVVVNE--------Y--LE-TNVPGVYAG-GDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMV 904 (1466)
Q Consensus 843 gl~~~~~G~i~vd~--------~--~~-t~~~~iya~-GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~ 904 (1466)
. +...+.+.+++ + +. .+.||+|.+ |..+.... ....+..|++.+++.|.
T Consensus 393 ~--i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s-----------~~~~~e~q~~~i~~~i~ 453 (540)
T 3gwf_A 393 E--IRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTN-----------LPPSIETQVEWISDTIG 453 (540)
T ss_dssp E--EECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSC-----------HHHHHHHHHHHHHHHHH
T ss_pred e--EECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCcc-----------HHHHHHHHHHHHHHHHH
Confidence 2 22222222221 1 22 358999999 76543111 22567888998888774
No 178
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.88 E-value=1.2e-22 Score=250.66 Aligned_cols=282 Identities=16% Similarity=0.131 Sum_probs=191.6
Q ss_pred CCcEEEECCchHHHHHHHHHH-hcCCCCcEEEEcCCCCCCC-----CCCCC----c-hhhccC-----------------
Q psy2951 1066 KDTFIVVGGGPSGATCVETLR-QNGFTGKLYFITDENFLPY-----DRVKL----S-KQLDIK----------------- 1117 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~-~~g~~~~i~li~~~~~~~~-----~~~~l----~-~~~~~~----------------- 1117 (1466)
..+|+|||||+||+++|..|+ +.|. +|+|||+++..+. ..|.. . ..+...
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~--~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~ 85 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGL--TTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYIT 85 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC--CEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCC--CEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCC
Confidence 368999999999999999999 8888 9999999865431 00100 0 000000
Q ss_pred cccccccChhhhccCCc--EEEcCCeEEEeecCCCC----eEEecCCcEEecCeEEEecC--CCCCcCCCCCCCC---c-
Q psy2951 1118 ADSILLRTEEFYKDNDI--HVIKGKKIISDSELNEK----KIKLQDGTSIDFTKIYLATG--SSPRTISQADGVN---K- 1185 (1466)
Q Consensus 1118 ~~~~~~~~~~~~~~~~v--~~~~~~~v~~i~d~~~~----~v~~~~g~~~~yd~lvlAtG--~~~~~~~~~~g~~---~- 1185 (1466)
..++.....+..+++++ +++++++|+++ +.... +|++++|+++.||+||+||| +.|+.|++| |++ +
T Consensus 86 ~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i-~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ip-G~~~f~g~ 163 (540)
T 3gwf_A 86 QPEILEYLEDVVDRFDLRRHFKFGTEVTSA-LYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLP-GLDTFEGE 163 (540)
T ss_dssp HHHHHHHHHHHHHHTTCGGGEEESCCEEEE-EEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCT-TGGGCCSE
T ss_pred HHHHHHHHHHHHHHcCCcceeEeccEEEEE-EEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCC-CccccCCC
Confidence 01111111234555677 78899999999 76554 78888999999999999999 599999999 876 2
Q ss_pred EEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccc----cHHHHHHHH-------
Q psy2951 1186 VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESL----GKEVGERIT------- 1254 (1466)
Q Consensus 1186 v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~----~~~~~~~l~------- 1254 (1466)
+++.....+ .....+|+|+|||+|.+|+|+|..|++.+.+|+++.|.+..+.+.+ .+...+.+.
T Consensus 164 ~~~~~~~~~-----~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~ 238 (540)
T 3gwf_A 164 TIHTAAWPE-----GKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIW 238 (540)
T ss_dssp EEEGGGCCS-----SCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHH
T ss_pred EEEeecCCC-----ccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHHhccHHHH
Confidence 222222222 1223589999999999999999999999999999999986422221 111111111
Q ss_pred ------------------------------------------------------------------HH------------
Q psy2951 1255 ------------------------------------------------------------------KL------------ 1256 (1466)
Q Consensus 1255 ------------------------------------------------------------------~~------------ 1256 (1466)
+.
T Consensus 239 ~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~ 318 (540)
T 3gwf_A 239 ERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETAR 318 (540)
T ss_dssp HHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHH
T ss_pred HHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 11
Q ss_pred ---------------------HHhCCcEEEc--CceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCccccccC
Q psy2951 1257 ---------------------FESKGVKFVM--KANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGK 1313 (1466)
Q Consensus 1257 ---------------------~~~~gv~~~~--~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~~~~~~~ 1313 (1466)
+.+.+|+++. ...|++++ ++ +|.++||+++++|+||+|||+.+++.++..
T Consensus 319 ~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it--~~----gv~~~dG~~~~~DvIV~ATGf~~~~~~~~~- 391 (540)
T 3gwf_A 319 KLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVT--AK----GVVTEDGVLHELDVLVFATGFDAVDGNYRR- 391 (540)
T ss_dssp HHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEEC--SS----EEEETTCCEEECSEEEECCCBSCSSHHHHT-
T ss_pred hCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEe--cC----eEEcCCCCEEECCEEEECCccCccccCcCc-
Confidence 1145888885 77899997 33 388999999999999999999999866654
Q ss_pred CceeeCCCeEEeCCC----------ccc-cCCCEEEe-cccccCCCccCCCceeeeecHHHHHHHHHHHHHHhc
Q psy2951 1314 GVELNGQKAVVVNEY----------LET-NVPGVYAG-GDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMV 1375 (1466)
Q Consensus 1314 gl~~~~~G~i~vd~~----------~~t-~~~~v~a~-GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~ 1375 (1466)
+.+..++++.+++. +.+ ..||+|++ |..+...+. ...+..|++.+++.|.
T Consensus 392 -~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s~-----------~~~~e~q~~~i~~~i~ 453 (540)
T 3gwf_A 392 -IEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNL-----------PPSIETQVEWISDTIG 453 (540)
T ss_dssp -SEEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSCH-----------HHHHHHHHHHHHHHHH
T ss_pred -ceEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCccH-----------HHHHHHHHHHHHHHHH
Confidence 33333334444422 223 38999999 765432111 1678889998887765
No 179
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.87 E-value=6.1e-22 Score=244.59 Aligned_cols=287 Identities=15% Similarity=0.116 Sum_probs=186.5
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCC---------CCCccchh------------------cccC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY---------DRVKLSKQ------------------LDIK 646 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~---------~~~~~~~~------------------~~~~ 646 (1466)
..++|+|||||+||+++|+.|++.|.+ |+++|+++.+++ ..+..... ....
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~--v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~ 85 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMK--VLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFAS 85 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCC--EEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCB
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCC--EEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCC
Confidence 458999999999999999999999987 889998754321 11110000 0012
Q ss_pred cccccccCHhHhhhCCc--EEEEceEEEEeccccc----cEEEccCCCEEecCEEEEcCC--CCCCcCCCCCCCCc--EE
Q psy2951 647 ADSILLRTEEFYKDNDI--HVIKGKKIISDSELNE----KKIKLQDGTSIDFTKIYLATG--SSPRTISQADGVNK--VF 716 (1466)
Q Consensus 647 ~~~~~~~~~~~~~~~gv--~~~~~~~v~~i~~~~~----~~v~~~~~~~~~~d~lviAtG--~~~~~~~~~~g~~~--~~ 716 (1466)
..++..++....++.++ .++++++|+.+ +... ..|++++|+++.||+||+||| +.|+.|++| |.+. ..
T Consensus 86 ~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~-~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ip-G~~~f~g~ 163 (545)
T 3uox_A 86 QPEMLRYVNRAADAMDVRKHYRFNTRVTAA-RYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIK-GIDSFKGE 163 (545)
T ss_dssp HHHHHHHHHHHHHHHTCGGGEECSCCEEEE-EEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCT-TGGGCCSE
T ss_pred HHHHHHHHHHHHHHcCCcCcEEECCEEEEE-EEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCC-CccccCCC
Confidence 33444555566667777 78889889888 4433 378888888999999999999 899999999 8762 11
Q ss_pred EecCHHHHHhhcc-------cCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccC----HHHHHHH---
Q psy2951 717 YLRTVEDANNIAP-------HITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLG----KEVGERI--- 782 (1466)
Q Consensus 717 ~~~~~~~~~~~~~-------~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~----~~~~~~~--- 782 (1466)
.+.+... ... ....+|+|+|||+|.+|+|+|..|++.+.+||++.|.+....+..+ +...+.+
T Consensus 164 ~~h~~~~---~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~ 240 (545)
T 3uox_A 164 SFHSSRW---PTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEKMDSLRNR 240 (545)
T ss_dssp EEEGGGC---CBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHHHHHHHHT
T ss_pred eEEcccc---cccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHHHHHHHhh
Confidence 1111111 111 2235899999999999999999999999999999999864322221 1111111
Q ss_pred --------------------------------------------------------------------------------
Q psy2951 783 -------------------------------------------------------------------------------- 782 (1466)
Q Consensus 783 -------------------------------------------------------------------------------- 782 (1466)
T Consensus 241 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~ 320 (545)
T 3uox_A 241 YPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKIRQRVKDP 320 (545)
T ss_dssp HHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHHHHHHCSCH
T ss_pred hHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCH
Confidence
Q ss_pred ------------------------HHHHHhcCcEEEc--cceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccCc
Q psy2951 783 ------------------------TKLFESKGVKFVM--KANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNT 836 (1466)
Q Consensus 783 ------------------------~~~l~~~gv~~~~--~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 836 (1466)
.+.|.+.+|+++. ...|++|++. .|.+++| ++++|.||+|||+.+++
T Consensus 321 ~~~~~l~P~~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~------gv~~~dG-~~~~D~IV~ATGf~~~~ 393 (545)
T 3uox_A 321 VVAEKLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPE------GIKTADA-AYDLDVIIYATGFDAVT 393 (545)
T ss_dssp HHHHHTSCSSSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETT------EEEESSC-EEECSEEEECCCCBSSS
T ss_pred HHHHhCCCCCCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccC------eEEeCCC-eeecCEEEECCcccccc
Confidence 1112223788875 6788888832 5788999 99999999999999876
Q ss_pred cccccCCceeeCCCcEEeCCC-----------CCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhc
Q psy2951 837 NYLDGKGVELNGQKAVVVNEY-----------LETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMV 904 (1466)
Q Consensus 837 ~~~~~~gl~~~~~G~i~vd~~-----------~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~ 904 (1466)
.++.. +.+...+...+++. +-.+.||+|.+.--..+.. .......+..|++.+++.|.
T Consensus 394 ~~~~~--~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~~~--------~~s~~~~~e~~~~~i~~~i~ 462 (545)
T 3uox_A 394 GSLDR--IDIRGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGST--------FCNVGVCGGLQAEWVLRMIS 462 (545)
T ss_dssp CSCTT--SEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGTGG--------GSCHHHHHHHHHHHHHHHHH
T ss_pred ccCCC--ceEECCCCccHHHhhccccceeeccccCCCCcEEEEeCCCCCCc--------cccHHHHHHHHHHHHHHHHH
Confidence 65543 33332222223211 1236899998842221100 00123567788999888774
No 180
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.86 E-value=2e-21 Score=239.92 Aligned_cols=288 Identities=17% Similarity=0.183 Sum_probs=183.5
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCC---------CCCCCCchh-hc-----------------cCc
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLP---------YDRVKLSKQ-LD-----------------IKA 1118 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~---------~~~~~l~~~-~~-----------------~~~ 1118 (1466)
..+|||||||+||+++|..|++.|. +|+|||+++.++ .-+...... +. ...
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~--~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~ 86 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGM--KVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQ 86 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTC--CEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCC--CEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCH
Confidence 4689999999999999999999998 899999986542 111000000 00 001
Q ss_pred ccccccChhhhccCCc--EEEcCCeEEEeecCCCC----eEEecCCcEEecCeEEEecC--CCCCcCCCCCCCC---c-E
Q psy2951 1119 DSILLRTEEFYKDNDI--HVIKGKKIISDSELNEK----KIKLQDGTSIDFTKIYLATG--SSPRTISQADGVN---K-V 1186 (1466)
Q Consensus 1119 ~~~~~~~~~~~~~~~v--~~~~~~~v~~i~d~~~~----~v~~~~g~~~~yd~lvlAtG--~~~~~~~~~~g~~---~-v 1186 (1466)
.++.....+..++.++ .++++++|+++ +.... .|++++|+++.||+||+||| +.|+.|++| |++ + .
T Consensus 87 ~ei~~yl~~~~~~~~l~~~i~~~~~V~~~-~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ip-G~~~f~g~~ 164 (545)
T 3uox_A 87 PEMLRYVNRAADAMDVRKHYRFNTRVTAA-RYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIK-GIDSFKGES 164 (545)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSCCEEEE-EEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCT-TGGGCCSEE
T ss_pred HHHHHHHHHHHHHcCCcCcEEECCEEEEE-EEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCC-CccccCCCe
Confidence 1111111223444565 68889999999 75544 78888999999999999999 799999999 876 2 2
Q ss_pred EE-ecCHHHHHhhhc-ccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCccccc----HHHHH---------
Q psy2951 1187 FY-LRTVEDANNIAP-HITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLG----KEVGE--------- 1251 (1466)
Q Consensus 1187 ~~-~~~~~~~~~l~~-~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~----~~~~~--------- 1251 (1466)
++ .+...+.....+ ....+|+|+|||+|.+|+|+|..|++.+.+||++.|.+..+.+..+ +...+
T Consensus 165 ~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~p~~ 244 (545)
T 3uox_A 165 FHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEKMDSLRNRYPTI 244 (545)
T ss_dssp EEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHHHHHHHHTHHHH
T ss_pred EEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHHHHHHHhhhHHH
Confidence 22 211111000000 1224899999999999999999999999999999999864221111 11100
Q ss_pred ---------------------------------------------------------------HH---------------
Q psy2951 1252 ---------------------------------------------------------------RI--------------- 1253 (1466)
Q Consensus 1252 ---------------------------------------------------------------~l--------------- 1253 (1466)
.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~ 324 (545)
T 3uox_A 245 LEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKIRQRVKDPVVAE 324 (545)
T ss_dssp HHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHH
T ss_pred HHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 01
Q ss_pred --------------------HHHHHhCCcEEEc--CceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCccccc
Q psy2951 1254 --------------------TKLFESKGVKFVM--KANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLD 1311 (1466)
Q Consensus 1254 --------------------~~~~~~~gv~~~~--~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~~~~~ 1311 (1466)
.+.+.+.+|+++. ...|++++ ++ +|.++|| ++++|+||+|||+.+++.++.
T Consensus 325 ~l~P~~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it--~~----gv~~~dG-~~~~D~IV~ATGf~~~~~~~~ 397 (545)
T 3uox_A 325 KLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVT--PE----GIKTADA-AYDLDVIIYATGFDAVTGSLD 397 (545)
T ss_dssp HTSCSSSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEE--TT----EEEESSC-EEECSEEEECCCCBSSSCSCT
T ss_pred hCCCCCCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEc--cC----eEEeCCC-eeecCEEEECCccccccccCC
Confidence 1112233788885 78899998 33 3889999 999999999999999877664
Q ss_pred cCCceeeCCCeEEeCCC----------cc-ccCCCEEEecccccCCCccCCCceeeeec-HHHHHHHHHHHHHHhc
Q psy2951 1312 GKGVELNGQKAVVVNEY----------LE-TNVPGVYAGGDIAYAPLHSFYNKNASIGH-YQLAQYHGRIAALNMV 1375 (1466)
Q Consensus 1312 ~~gl~~~~~G~i~vd~~----------~~-t~~~~v~a~GD~a~~p~~~~~~~~~~~~~-~~~A~~qa~~aa~~i~ 1375 (1466)
. +.+.++++..+++. +. ...||+|.+.- |+... -..+ -..+..|++.+++.|.
T Consensus 398 ~--~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~g----p~~~~-----~~~s~~~~~e~~~~~i~~~i~ 462 (545)
T 3uox_A 398 R--IDIRGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVG----PHNGS-----TFCNVGVCGGLQAEWVLRMIS 462 (545)
T ss_dssp T--SEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEECSS----GGGTG-----GGSCHHHHHHHHHHHHHHHHH
T ss_pred C--ceEECCCCccHHHhhccccceeeccccCCCCcEEEEeC----CCCCC-----ccccHHHHHHHHHHHHHHHHH
Confidence 3 44444444555422 11 23799998842 21100 0011 1567888888888765
No 181
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.86 E-value=3.6e-21 Score=237.97 Aligned_cols=168 Identities=18% Similarity=0.231 Sum_probs=123.4
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCC---------CCCccchh-----c-------------ccC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY---------DRVKLSKQ-----L-------------DIK 646 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~---------~~~~~~~~-----~-------------~~~ 646 (1466)
..++|+|||||+||+++|..|++.|.+ |+++|+++.+++ ..+..... + ...
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~--v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~ 97 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLT--VRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYAT 97 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC--EEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCB
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCC--EEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCC
Confidence 457999999999999999999999986 888998654331 10000000 0 012
Q ss_pred cccccccCHhHhhhCCc--EEEEceEEEEeccccc----cEEEccCCCEEecCEEEEcCC--CCCCcCCCCCCCCc----
Q psy2951 647 ADSILLRTEEFYKDNDI--HVIKGKKIISDSELNE----KKIKLQDGTSIDFTKIYLATG--SSPRTISQADGVNK---- 714 (1466)
Q Consensus 647 ~~~~~~~~~~~~~~~gv--~~~~~~~v~~i~~~~~----~~v~~~~~~~~~~d~lviAtG--~~~~~~~~~~g~~~---- 714 (1466)
..++..++....++.++ +++++++|+.+ +... ..|++++|.++.||+||+||| +.|..|++| |.+.
T Consensus 98 ~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i-~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ip-G~~~f~g~ 175 (549)
T 4ap3_A 98 QPEILAYLEHVADRFDLRRDIRFDTRVTSA-VLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAFD-GLDRFTGD 175 (549)
T ss_dssp HHHHHHHHHHHHHHTTCGGGEECSCCEEEE-EEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCCT-TGGGCCSE
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCEEEEE-EEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCCC-CcccCCCc
Confidence 33445555666777887 78999889888 4443 378888898999999999999 899999999 8761
Q ss_pred EEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCcc
Q psy2951 715 VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVP 769 (1466)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 769 (1466)
.++...... ......+|+|+|||+|.+|+|+|..|++.+.+||++.|.+..
T Consensus 176 ~~~~~~~~~----~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 176 IVHTARWPH----DGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp EEEGGGCCT----TCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred eEEeccccc----cccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 222211110 011225899999999999999999999999999999999864
No 182
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.85 E-value=3.9e-21 Score=237.57 Aligned_cols=166 Identities=19% Similarity=0.267 Sum_probs=120.5
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCC----CC-CC----C-chhhcc-----------------Cc
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY----DR-VK----L-SKQLDI-----------------KA 1118 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~----~~-~~----l-~~~~~~-----------------~~ 1118 (1466)
..+|||||||+||+++|..|++.|+ +|+|||+++.++. .+ |. . +..+.. ..
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~--~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~ 98 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGL--TVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQ 98 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC--CEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCC--CEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCH
Confidence 4689999999999999999999998 9999999764330 00 00 0 000000 01
Q ss_pred ccccccChhhhccCCc--EEEcCCeEEEeecCCCC----eEEecCCcEEecCeEEEecC--CCCCcCCCCCCCC---c-E
Q psy2951 1119 DSILLRTEEFYKDNDI--HVIKGKKIISDSELNEK----KIKLQDGTSIDFTKIYLATG--SSPRTISQADGVN---K-V 1186 (1466)
Q Consensus 1119 ~~~~~~~~~~~~~~~v--~~~~~~~v~~i~d~~~~----~v~~~~g~~~~yd~lvlAtG--~~~~~~~~~~g~~---~-v 1186 (1466)
.++.....+..++.++ +++++++|+++ +...+ +|++++|.++.||+||+||| +.|+.|++| |++ + +
T Consensus 99 ~ei~~yl~~~~~~~g~~~~i~~~~~V~~i-~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ip-G~~~f~g~~ 176 (549)
T 4ap3_A 99 PEILAYLEHVADRFDLRRDIRFDTRVTSA-VLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAFD-GLDRFTGDI 176 (549)
T ss_dssp HHHHHHHHHHHHHTTCGGGEECSCCEEEE-EEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCCT-TGGGCCSEE
T ss_pred HHHHHHHHHHHHHcCCCccEEECCEEEEE-EEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCCC-CcccCCCce
Confidence 1111111234555676 78999999999 76554 78889999999999999999 799999999 876 2 2
Q ss_pred EEecCHH-HHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcC
Q psy2951 1187 FYLRTVE-DANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVP 1240 (1466)
Q Consensus 1187 ~~~~~~~-~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~ 1240 (1466)
++...+. +...+ .+|+|+|||+|.+|+|+|..|++.+.+|+++.|.+..
T Consensus 177 ~~~~~~~~~~~~~-----~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 177 VHTARWPHDGVDF-----TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp EEGGGCCTTCCCC-----BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred EEecccccccccc-----CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 3322222 22111 4899999999999999999999999999999998863
No 183
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.83 E-value=9.8e-21 Score=235.74 Aligned_cols=292 Identities=18% Similarity=0.191 Sum_probs=189.9
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCC-------CCCCCC-----------chhh--ccCccc-----
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLP-------YDRVKL-----------SKQL--DIKADS----- 1120 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~-------~~~~~l-----------~~~~--~~~~~~----- 1120 (1466)
..+|+|||||++|+++|..|++.|+ +|+|||+++..+ |....+ .... ......
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~--~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~ 93 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGR--SVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQ 93 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC--CEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCC--CEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCH
Confidence 4689999999999999999999998 999999987542 110000 0000 000000
Q ss_pred --ccccChhhhccCC--cEEEcCCeEEEeecCCC----CeEEecCCcEEecCeEEEecC--CCCCcCCCCCCCC---c--
Q psy2951 1121 --ILLRTEEFYKDND--IHVIKGKKIISDSELNE----KKIKLQDGTSIDFTKIYLATG--SSPRTISQADGVN---K-- 1185 (1466)
Q Consensus 1121 --~~~~~~~~~~~~~--v~~~~~~~v~~i~d~~~----~~v~~~~g~~~~yd~lvlAtG--~~~~~~~~~~g~~---~-- 1185 (1466)
+........++.+ ++++++++|+++ +... .+|++++|.++.+|+||+||| +.|+.|++| |++ +
T Consensus 94 ~~i~~yl~~~~~~~~l~~~i~~~~~V~~~-~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~-G~~~f~G~~ 171 (542)
T 1w4x_A 94 PEILRYINFVADKFDLRSGITFHTTVTAA-AFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFP-GLKDFAGNL 171 (542)
T ss_dssp HHHHHHHHHHHHHTTGGGGEECSCCEEEE-EEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCT-TGGGCCSEE
T ss_pred HHHHHHHHHHHHHcCCCceEEcCcEEEEE-EEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCC-CcccCCCce
Confidence 0000011223333 578899999998 6432 368888898999999999999 478888888 876 3
Q ss_pred EEEecCHHHHHhhhcccCCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCC-cc---cccHHH------------
Q psy2951 1186 VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPF-QE---SLGKEV------------ 1249 (1466)
Q Consensus 1186 v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~-~~---~~~~~~------------ 1249 (1466)
+|+.+...+. ....+|+|+|||+|.+|+|++..+++.+.+|+++.|.+... ++ .+.++.
T Consensus 172 ~hs~~~~~~~-----~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~~~p~l~ 246 (542)
T 1w4x_A 172 YHTGNWPHEP-----VDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKKRYAEFR 246 (542)
T ss_dssp EEGGGCCSSC-----CCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHHHHTTHHHHH
T ss_pred EECCCCCCch-----hccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHHHHhhCHHHH
Confidence 2222111011 11248999999999999999999999999999999886441 10 011100
Q ss_pred -----------------------------------------------------------HHHHHHHH-------------
Q psy2951 1250 -----------------------------------------------------------GERITKLF------------- 1257 (1466)
Q Consensus 1250 -----------------------------------------------------------~~~l~~~~------------- 1257 (1466)
.+.+.+.+
T Consensus 247 ~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 326 (542)
T 1w4x_A 247 EESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAERL 326 (542)
T ss_dssp HHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHHHHHHH
T ss_pred HHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHHHHHhc
Confidence 11111111
Q ss_pred ----------------------HhCCcEEE--cCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCccccccC
Q psy2951 1258 ----------------------ESKGVKFV--MKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGK 1313 (1466)
Q Consensus 1258 ----------------------~~~gv~~~--~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~~~~~~~ 1313 (1466)
.+.+|+++ .+..|++++ ++ +|.++| +++++|.||+|||+.++++++..
T Consensus 327 ~P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~--~~----gv~~~d-~~~~~D~ii~atG~~~~~~~~~~- 398 (542)
T 1w4x_A 327 VPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETIT--PR----GVRTSE-REYELDSLVLATGFDALTGALFK- 398 (542)
T ss_dssp SCCSSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEEC--SS----EEEESS-CEEECSEEEECCCCCCTTHHHHT-
T ss_pred CCCCCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEc--CC----eEEeCC-eEEecCEEEEcCCccccccCcCc-
Confidence 11346666 366788886 33 388899 89999999999999998887765
Q ss_pred CceeeCCCeEEeCCCccccCCCEEEecccccCCCccCC-Cce--eeeecH-HHHHHHHHHHHHHhcC
Q psy2951 1314 GVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFY-NKN--ASIGHY-QLAQYHGRIAALNMVE 1376 (1466)
Q Consensus 1314 gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~-~~~--~~~~~~-~~A~~qa~~aa~~i~g 1376 (1466)
+.+..++++.+++.++ +.|.+|..++++.+|+.... |.. ....+| ..|..|++.+|++|..
T Consensus 399 -~~i~g~~G~~l~~~w~-~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~~ 463 (542)
T 1w4x_A 399 -IDIRGVGNVALKEKWA-AGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAY 463 (542)
T ss_dssp -SEEECGGGCBHHHHTT-TSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred -eeeECCCCCCHHHhhc-CchheecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHHH
Confidence 4433344466665544 34556666666666553211 222 235667 7889999999999874
No 184
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.83 E-value=2.9e-20 Score=231.54 Aligned_cols=285 Identities=16% Similarity=0.171 Sum_probs=183.6
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCC-------C--CCcc-------c--hh----cc-----cC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY-------D--RVKL-------S--KQ----LD-----IK 646 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~-------~--~~~~-------~--~~----~~-----~~ 646 (1466)
..+||+|||||+||+++|..|+++|.+ |+++|+++.+++ . .+.. . .. +. ..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~--v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~ 92 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRS--VHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYAS 92 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCC--EEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCB
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCC--EEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCC
Confidence 357999999999999999999999986 888888754321 1 0000 0 00 00 11
Q ss_pred cccccccCHhHhhhCC--cEEEEceEEEEecccc----ccEEEccCCCEEecCEEEEcCC--CCCCcCCCCCCCC---c-
Q psy2951 647 ADSILLRTEEFYKDND--IHVIKGKKIISDSELN----EKKIKLQDGTSIDFTKIYLATG--SSPRTISQADGVN---K- 714 (1466)
Q Consensus 647 ~~~~~~~~~~~~~~~g--v~~~~~~~v~~i~~~~----~~~v~~~~~~~~~~d~lviAtG--~~~~~~~~~~g~~---~- 714 (1466)
..++..++....++.+ ++++++++|..+ +.+ ...|++++|+++.||+||+||| +.|+.|+++ |.+ +
T Consensus 93 ~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~-~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~-G~~~f~G~ 170 (542)
T 1w4x_A 93 QPEILRYINFVADKFDLRSGITFHTTVTAA-AFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFP-GLKDFAGN 170 (542)
T ss_dssp HHHHHHHHHHHHHHTTGGGGEECSCCEEEE-EEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCT-TGGGCCSE
T ss_pred HHHHHHHHHHHHHHcCCCceEEcCcEEEEE-EEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCC-CcccCCCc
Confidence 1223333334445554 578889989887 332 3578888888999999999999 678889998 875 2
Q ss_pred EEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccc----cCHHHH-----------
Q psy2951 715 VFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQES----LGKEVG----------- 779 (1466)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~----~~~~~~----------- 779 (1466)
.++...... ......+|+|+|||+|.+|+|++..|++.+.+|+++.|.+....+. +..+..
T Consensus 171 ~~hs~~~~~----~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~~~p~l~ 246 (542)
T 1w4x_A 171 LYHTGNWPH----EPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKKRYAEFR 246 (542)
T ss_dssp EEEGGGCCS----SCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHHHHTTHHHHH
T ss_pred eEECCCCCC----chhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHHHHhhCHHHH
Confidence 222111100 0112358999999999999999999999999999999987542111 111110
Q ss_pred ------------------------------------------------------------HHHHHHH-------------
Q psy2951 780 ------------------------------------------------------------ERITKLF------------- 786 (1466)
Q Consensus 780 ------------------------------------------------------------~~~~~~l------------- 786 (1466)
+.+.+.+
T Consensus 247 ~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 326 (542)
T 1w4x_A 247 EESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAERL 326 (542)
T ss_dssp HHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHHHHHHH
T ss_pred HHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHHHHHhc
Confidence 0111111
Q ss_pred ----------------------HhcCcEEE--ccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccCccccccC
Q psy2951 787 ----------------------ESKGVKFV--MKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGK 842 (1466)
Q Consensus 787 ----------------------~~~gv~~~--~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~ 842 (1466)
.+.+|+++ .+..|++|++. .|.++| +++++|+||+|||+++++.++...
T Consensus 327 ~P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~------gv~~~d-~~~~~D~ii~atG~~~~~~~~~~~ 399 (542)
T 1w4x_A 327 VPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPR------GVRTSE-REYELDSLVLATGFDALTGALFKI 399 (542)
T ss_dssp SCCSSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSS------EEEESS-CEEECSEEEECCCCCCTTHHHHTS
T ss_pred CCCCCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCC------eEEeCC-eEEecCEEEEcCCccccccCcCce
Confidence 11346665 35678888732 577888 899999999999999987776643
Q ss_pred CceeeCCCcEEeCCCC----------C-CCCCCeEEe-ccccccCCcccCCceeeeccH-HHHHHHHHHHHHHhcc
Q psy2951 843 GVELNGQKAVVVNEYL----------E-TNVPGVYAG-GDIAYAPLHSFYNKNASIGHY-QLAQYHGRIAALNMVE 905 (1466)
Q Consensus 843 gl~~~~~G~i~vd~~~----------~-t~~~~iya~-GD~~~~~~~~~~~~~~~~~~~-~~A~~~g~~aA~~i~~ 905 (1466)
++. ..+|.. +++.+ . ...||+|++ |+.+... .+++ ..|..|++.+|++|..
T Consensus 400 ~i~-g~~G~~-l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~----------~~~~~~~~e~q~~~ia~~i~~ 463 (542)
T 1w4x_A 400 DIR-GVGNVA-LKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSA----------LSNMLVSIEQHVEWVTDHIAY 463 (542)
T ss_dssp EEE-CGGGCB-HHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGG----------GSCHHHHHHHHHHHHHHHHHH
T ss_pred eeE-CCCCCC-HHHhhcCchheecccccCCCCceEEEcCCCCCcc----------cccHHHHHHHHHHHHHHHHHH
Confidence 322 223433 33221 1 246777776 7654211 1233 6899999999999863
No 185
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.77 E-value=1.2e-18 Score=183.64 Aligned_cols=154 Identities=19% Similarity=0.185 Sum_probs=132.2
Q ss_pred eEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcc-------------cccHHHHHHHHHHHHhCCcEEEcCceEEEE
Q psy2951 1207 NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQE-------------SLGKEVGERITKLFESKGVKFVMKANVSSF 1273 (1466)
Q Consensus 1207 ~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~-------------~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i 1273 (1466)
+|+|||+|++|+++|..|++.|.+|+++++.+..+.+ ..++++.+.+.+.+++.||+++.+ +|+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 6999999999999999999999999999998755521 124788899999999999999999 99999
Q ss_pred EecCCCcEEEEEcCCCCeeecCEEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCc
Q psy2951 1274 EKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNK 1353 (1466)
Q Consensus 1274 ~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~ 1353 (1466)
+. +++. ..+.+++| ++++|.||+|+|..|+ +++..|++++ +|.+.||++++|+.|+|||+|||+..+..
T Consensus 82 ~~-~~~~-~~v~~~~g-~i~ad~vI~A~G~~~~--~~~~~g~~~~-~g~i~vd~~~~t~~~~i~a~GD~~~~~~~----- 150 (180)
T 2ywl_A 82 RD-MGGV-FEVETEEG-VEKAERLLLCTHKDPT--LPSLLGLTRR-GAYIDTDEGGRTSYPRVYAAGVARGKVPG----- 150 (180)
T ss_dssp EE-CSSS-EEEECSSC-EEEEEEEEECCTTCCH--HHHHHTCCEE-TTEECCCTTCBCSSTTEEECGGGGTCCSC-----
T ss_pred EE-cCCE-EEEEECCC-EEEECEEEECCCCCCC--ccccCCCCcc-CceEEeCCCCCcCCCCEEEeecccCcchh-----
Confidence 83 3323 46888888 8999999999999985 4567788888 88899999999999999999999987642
Q ss_pred eeeeecHHHHHHHHHHHHHHhcCC
Q psy2951 1354 NASIGHYQLAQYHGRIAALNMVEK 1377 (1466)
Q Consensus 1354 ~~~~~~~~~A~~qa~~aa~~i~g~ 1377 (1466)
+|..|..||+.||.||++.
T Consensus 151 -----~~~~A~~~g~~aa~~i~~~ 169 (180)
T 2ywl_A 151 -----HAIISAGDGAYVAVHLVSD 169 (180)
T ss_dssp -----CHHHHHHHHHHHHHHHHHH
T ss_pred -----hHHHHHHhHHHHHHHHHHH
Confidence 4589999999999999973
No 186
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.77 E-value=1.9e-18 Score=182.24 Aligned_cols=154 Identities=20% Similarity=0.195 Sum_probs=131.5
Q ss_pred cEEEECCChHHHHHHHHHhccCCeEEEEeecCccCcc--------cc-----CHHHHHHHHHHHHhcCcEEEccceEEEE
Q psy2951 736 NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQE--------SL-----GKEVGERITKLFESKGVKFVMKANVSSF 802 (1466)
Q Consensus 736 ~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~--------~~-----~~~~~~~~~~~l~~~gv~~~~~~~v~~i 802 (1466)
+|+|||+|++|+++|..|++.|.+|+++++.+..+.. .+ ++++.+.+.+.+++.||+++.+ +++++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 6899999999999999999999999999998754421 12 4788888999999999999999 99999
Q ss_pred EecCCCceEEEECCCCcEEecCEEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCc
Q psy2951 803 EKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNK 882 (1466)
Q Consensus 803 ~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~ 882 (1466)
+..++ . ..+.+++| ++++|.||+|+|..|+ +++.+|++++ +|++.+|++++|+.|+|||+|||+..+..
T Consensus 82 ~~~~~-~-~~v~~~~g-~i~ad~vI~A~G~~~~--~~~~~g~~~~-~g~i~vd~~~~t~~~~i~a~GD~~~~~~~----- 150 (180)
T 2ywl_A 82 RDMGG-V-FEVETEEG-VEKAERLLLCTHKDPT--LPSLLGLTRR-GAYIDTDEGGRTSYPRVYAAGVARGKVPG----- 150 (180)
T ss_dssp EECSS-S-EEEECSSC-EEEEEEEEECCTTCCH--HHHHHTCCEE-TTEECCCTTCBCSSTTEEECGGGGTCCSC-----
T ss_pred EEcCC-E-EEEEECCC-EEEECEEEECCCCCCC--ccccCCCCcc-CceEEeCCCCCcCCCCEEEeecccCcchh-----
Confidence 85433 2 46788888 8999999999999985 4567788888 89999999999999999999999987541
Q ss_pred eeeeccHHHHHHHHHHHHHHhccC
Q psy2951 883 NASIGHYQLAQYHGRIAALNMVEK 906 (1466)
Q Consensus 883 ~~~~~~~~~A~~~g~~aA~~i~~~ 906 (1466)
++..|..||+.||.||.+.
T Consensus 151 -----~~~~A~~~g~~aa~~i~~~ 169 (180)
T 2ywl_A 151 -----HAIISAGDGAYVAVHLVSD 169 (180)
T ss_dssp -----CHHHHHHHHHHHHHHHHHH
T ss_pred -----hHHHHHHhHHHHHHHHHHH
Confidence 4578999999999999864
No 187
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.70 E-value=8e-16 Score=188.83 Aligned_cols=282 Identities=13% Similarity=0.099 Sum_probs=169.6
Q ss_pred cCCCCCCeEEEEcCchHHHHHHHHHHHcCCC------------ccEEEEcCCCCCCCCC--------Cccch--h-----
Q psy2951 590 LSSGNKDTFIVVGGGPSGATCVETLRQNGFT------------GKLYFITDENFLPYDR--------VKLSK--Q----- 642 (1466)
Q Consensus 590 ~~~~~~~~vvVIGgG~AGl~aA~~l~~~g~~------------~~v~~~~~~~~~~~~~--------~~~~~--~----- 642 (1466)
.+....+||||||+||+||++|..|.+.|.. .....+|+.+.+.++. +..+. .
T Consensus 34 tp~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~ 113 (501)
T 4b63_A 34 TPQDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLR 113 (501)
T ss_dssp CCTTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTT
T ss_pred CCCCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhcccc
Confidence 3445568999999999999999999987543 2345566654333211 11100 0
Q ss_pred --------------------------cccCcccccccCHhHhhhCCcEEEEceEEEEeccc---------cccEEEccCC
Q psy2951 643 --------------------------LDIKADSILLRTEEFYKDNDIHVIKGKKIISDSEL---------NEKKIKLQDG 687 (1466)
Q Consensus 643 --------------------------~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~---------~~~~v~~~~~ 687 (1466)
+.....++..++....++.+..++++++|+++... ..++|++.++
T Consensus 114 ~P~s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~ 193 (501)
T 4b63_A 114 DPRSSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNV 193 (501)
T ss_dssp CTTCTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEET
T ss_pred CCCCccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecC
Confidence 00122344445555555667789999999888311 1256666543
Q ss_pred -----CEEecCEEEEcCCCCCCcCCCCCCCCcEEEecCHHHH-HhhcccCCCCCcEEEECCChHHHHHHHHHhcc--CCe
Q psy2951 688 -----TSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDA-NNIAPHITPESNVVVIGSSFIGMEAAAFCASK--VKS 759 (1466)
Q Consensus 688 -----~~~~~d~lviAtG~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~--g~~ 759 (1466)
.++.+++||+|||..|..|...+....+++.....+. ..+.....++|+|+|||+|.+|+|++..|++. +.+
T Consensus 194 ~~g~~~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~ 273 (501)
T 4b63_A 194 ETGEISARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSR 273 (501)
T ss_dssp TTCCEEEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCE
T ss_pred CCceEEEEEeCEEEECcCCCCCCCCCCCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhcCCCce
Confidence 3688999999999988888766232256655554432 22333334699999999999999999999875 789
Q ss_pred EEEEeecCccCcc--------ccCHH-----------H--------------------HHHHHHHHHh----------cC
Q psy2951 760 VTVVGRGAVPFQE--------SLGKE-----------V--------------------GERITKLFES----------KG 790 (1466)
Q Consensus 760 V~lv~~~~~~~~~--------~~~~~-----------~--------------------~~~~~~~l~~----------~g 790 (1466)
|+++.|++..... .+.++ . ...+.+.+-+ ..
T Consensus 274 v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~ 353 (501)
T 4b63_A 274 TTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQ 353 (501)
T ss_dssp EEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCS
T ss_pred EEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccccc
Confidence 9999998643211 11111 1 1111111111 12
Q ss_pred cEEEccceEEEEEecCCC-ce-----------EEEECCCCcEEecCEEEEccccccCcc--ccccC-CceeeCCCcEEeC
Q psy2951 791 VKFVMKANVSSFEKNEKN-DV-----------TAANLDNGTTIPADLVIVGIGTVLNTN--YLDGK-GVELNGQKAVVVN 855 (1466)
Q Consensus 791 v~~~~~~~v~~i~~~~~~-~~-----------~~v~~~~g~~i~~D~vi~a~G~~p~~~--~~~~~-gl~~~~~G~i~vd 855 (1466)
..+..+..+..+...... .+ ..+.+.+|+++++|.||+|||++++.. |+... .+..+.+|...++
T Consensus 354 ~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~ 433 (501)
T 4b63_A 354 HRILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPH 433 (501)
T ss_dssp SEEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBC
T ss_pred eeecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeC
Confidence 345566666666532221 11 134567889999999999999998853 22211 2445666777777
Q ss_pred CCCCC--------CCCCeEEeccc
Q psy2951 856 EYLET--------NVPGVYAGGDI 871 (1466)
Q Consensus 856 ~~~~t--------~~~~iya~GD~ 871 (1466)
..++. ..++||+.|-+
T Consensus 434 rdy~~~~~~~~~~~~~~i~~qg~~ 457 (501)
T 4b63_A 434 RDYRVEMDPSKVSSEAGIWLQGCN 457 (501)
T ss_dssp TTSBBCCCTTTBCTTCEEEECSCC
T ss_pred CCcEEeecCCccCCCceEEecCCC
Confidence 65442 24679999843
No 188
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.68 E-value=1.6e-15 Score=186.06 Aligned_cols=279 Identities=14% Similarity=0.116 Sum_probs=161.7
Q ss_pred CCCCCcEEEECCchHHHHHHHHHHhcCCCCc------------EEEEcCCCCC--------CCCCCccc--hh-------
Q psy2951 40 SGNKDTFIVVGGGPSGATCVETLRQNGFTGK------------LYFITDENFL--------PYDRVKLS--KQ------- 90 (1466)
Q Consensus 40 ~~~~~dVvIIGgG~AGl~aA~~l~~~g~~v~------------i~~~~~~~~~--------~~~~~~~~--~~------- 90 (1466)
....+||||||+||+||++|..|++.|.... ...+++.+.. +...+..+ +.
T Consensus 36 ~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P 115 (501)
T 4b63_A 36 QDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDP 115 (501)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCT
T ss_pred CCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCC
Confidence 3456899999999999999999998765432 2223332211 11111000 00
Q ss_pred ------------------------cccCcccccccChhhhhcCCeEEEeCceEEEeccc---------cccEEEecCC--
Q psy2951 91 ------------------------LDIKADSILLRTEEFYKDNDIHVIKGKKIISDSEL---------NEKKIKLQDG-- 135 (1466)
Q Consensus 91 ------------------------~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~---------~~~~v~~~~~-- 135 (1466)
+.....++..|+....++.+..+..++.|...... +.++|++.++
T Consensus 116 ~s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~ 195 (501)
T 4b63_A 116 RSSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVET 195 (501)
T ss_dssp TCTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTT
T ss_pred CCccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCC
Confidence 01122344455566666777778888877653211 1366776543
Q ss_pred ---cEEecCEEEEccCCCCCCCCCCCCCCcEEEecCHH-HHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhC--CCEEE
Q psy2951 136 ---TSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVE-DANNIAPHITPESNVVVIGSSFIGMEAAAFCASK--VKSVT 209 (1466)
Q Consensus 136 ---~~~~~d~lviAtG~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~--g~~Vt 209 (1466)
.++.+++||+|||..|..+...+....++.-.... ....+......+|+|+|||+|.+|+|++..|++. +.+|+
T Consensus 196 g~~~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~ 275 (501)
T 4b63_A 196 GEISARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTT 275 (501)
T ss_dssp CCEEEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEEE
T ss_pred ceEEEEEeCEEEECcCCCCCCCCCCCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhcCCCceEE
Confidence 35889999999999887655444444444322222 2223334456789999999999999999999764 68999
Q ss_pred EEeecCccccc--------ccCHHH-------------------------------HHHHHHHH-----H-----hCCcE
Q psy2951 210 VVGRGAVPFQE--------SLGKEV-------------------------------GERITKLF-----E-----SKGVK 240 (1466)
Q Consensus 210 lv~~~~~~~~~--------~~~~~~-------------------------------~~~l~~~l-----~-----~~GV~ 240 (1466)
++.|++...+. .+.+++ .+.+.+.+ . ....+
T Consensus 276 ~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~ 355 (501)
T 4b63_A 276 LIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQHR 355 (501)
T ss_dssp EECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSE
T ss_pred EEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCccccccee
Confidence 99997543211 111111 11111111 1 11235
Q ss_pred EEcCceEEEEEecCC-CCe-----------EEEEcCCCcEEeccEEEEeeccccCcc-c-ccc-CCceecCCccEEECCC
Q psy2951 241 FVMKANVSSFEKNEK-NDV-----------TAANLDNGTTIPADLVIVGIGTVLNTN-Y-LDG-KGVELNGQKAVVVNEY 305 (1466)
Q Consensus 241 i~~~~~v~~i~~~~~-~~~-----------~~v~~~~g~~i~~D~Vi~a~G~~p~~~-~-l~~-~gl~~~~~g~i~vd~~ 305 (1466)
+..+..+.+++.... +.+ ..+.+++|+++++|.||+|||++++.. + +.. ..+..+.+|.+.|+..
T Consensus 356 l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~rd 435 (501)
T 4b63_A 356 ILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPHRD 435 (501)
T ss_dssp EECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBCTT
T ss_pred ecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeCCC
Confidence 666666666553321 111 124567889999999999999998753 2 211 1244566677777766
Q ss_pred CCc--------CCCCEEEecc
Q psy2951 306 LET--------NVPGVYAGGD 318 (1466)
Q Consensus 306 ~~t--------~~~~iya~GD 318 (1466)
++. ..++||+.|-
T Consensus 436 y~~~~~~~~~~~~~~i~~qg~ 456 (501)
T 4b63_A 436 YRVEMDPSKVSSEAGIWLQGC 456 (501)
T ss_dssp SBBCCCTTTBCTTCEEEECSC
T ss_pred cEEeecCCccCCCceEEecCC
Confidence 542 2467999883
No 189
>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B*
Probab=99.59 E-value=3.4e-15 Score=139.89 Aligned_cols=77 Identities=22% Similarity=0.476 Sum_probs=68.9
Q ss_pred CCCCEEEEEeeCCeEEEEeCCCCCCCcccCCceecCCEEEccCCCceEECCCCeeecCCCCCCCCeEEEEEEcCeEEE
Q psy2951 493 SSTPKTLAQSTTSNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVV 570 (1466)
Q Consensus 493 ~~~~~~~~~~~~g~~~a~~~~C~H~~~~l~~g~~~~~~~~Cp~H~~~f~~~~G~~~~~p~~~~l~~~~v~i~~~~~~~ 570 (1466)
++..+ ++++.+|+++|++|.|||+|++|++|.++++.+.||||||+|++++|++..+|+..+|+.|+++++++.+++
T Consensus 22 ~g~~i-~v~r~~g~~~A~~~~CpH~g~~L~~g~~~~~~i~Cp~Hg~~Fdl~~G~~~~~P~~~~L~~~~v~~~~g~v~v 98 (106)
T 3dqy_A 22 GPEPV-MVCNVDGEFFAVQDTCTHGDWALSDGYLDGDIVECTLHFGKFCVRTGKVKALPACKPIKVFPIKVEGDEVHV 98 (106)
T ss_dssp SSSCE-EEEEETTEEEEEESBCSSSSCBGGGSEEETTEEECTTTCCEEETTTCCEEETTCCSCCCEECEEEETTEEEE
T ss_pred CCEEE-EEEEECCEEEEEeCcCCCCCCCCcCcEEeCCEEECCCCCCEEeCCCCCEeCCCCCCCccEEEEEEECCEEEE
Confidence 43444 555789999999999999999999999999999999999999999999999999899999999998777665
No 190
>2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida}
Probab=99.58 E-value=4.9e-15 Score=138.09 Aligned_cols=76 Identities=25% Similarity=0.440 Sum_probs=68.5
Q ss_pred CCEEEEEeeCCeEEEEeCCCCCCCcccCCceecCCEEEccCCCceEECCCCeeecCCCCCCCCeEEEEEEcCeEEE
Q psy2951 495 TPKTLAQSTTSNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVV 570 (1466)
Q Consensus 495 ~~~~~~~~~~g~~~a~~~~C~H~~~~l~~g~~~~~~~~Cp~H~~~f~~~~G~~~~~p~~~~l~~~~v~i~~~~~~~ 570 (1466)
++.+++++.+|+++|++|.|||+|++|++|.++++.+.||||||+|++++|++..+|+..+|+.|+++++++.+|+
T Consensus 25 g~~i~v~r~~g~~~A~~~~CpH~g~~L~~g~~~~~~i~Cp~Hg~~Fd~~~G~~~~~P~~~~L~~~~v~~~~g~v~v 100 (103)
T 2qpz_A 25 GKELALYEVEGEIYATDNLCTHGSARMSDGYLEGREIECPLHQGRFDVCTGKALCAPVTQNIKTYPVKIENLRVMI 100 (103)
T ss_dssp TEEEEEEEETTEEEEEESBCSSSSCBGGGSEEETTEEECTTTTCEEETTTCCEEETTCCSCCCEECEEEETTEEEE
T ss_pred CEEEEEEEECCEEEEECCcCCCCCCCCCCCeEeCCEEECCCCCCEEeCCCCCEeCCCCCCCCCEEeEEEECCEEEE
Confidence 3445555689999999999999999999999988999999999999999999999999889999999998877765
No 191
>2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae}
Probab=99.57 E-value=9.1e-15 Score=137.50 Aligned_cols=79 Identities=27% Similarity=0.509 Sum_probs=68.5
Q ss_pred CCCCEEEEEeeCCeEEEEeCCCCCCCcccCCceecCCEEEccCCCceEECCCCeeecCCCCCCCCeEEEEEEcCeEEEE
Q psy2951 493 SSTPKTLAQSTTSNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVV 571 (1466)
Q Consensus 493 ~~~~~~~~~~~~g~~~a~~~~C~H~~~~l~~g~~~~~~~~Cp~H~~~f~~~~G~~~~~p~~~~l~~~~v~i~~~~~~~~ 571 (1466)
++...+++++.+|+++|++|.|||+|++|++|.++++.+.||||||+|++++|++..+|+..+|+.|+++++++.+|+.
T Consensus 24 ~g~~~v~v~r~~g~~~A~~~~CpH~g~~L~~g~~~~~~i~Cp~Hg~~Fdl~tG~~~~~P~~~~L~~~~v~~~~g~v~v~ 102 (108)
T 2i7f_A 24 EKMPALAVYNVDGEVFVTDNLCTHGNAMLTDGYQDGTIIECPFHGGSFDIATGAAKAFPCQIPIKTYPVTIEDGWVCID 102 (108)
T ss_dssp TTSSCEEEEEETTEEEEEESBCSSSSCBGGGSEEETTEEECSSTTCEEETTTCCBCSTTCCSCCCEECEEEETTEEEEE
T ss_pred CCeeEEEEEEECCEEEEEeCcCCCCCCCCCCCEEeCCEEEcCCCCCEEeCCCcCEeCCCCCCCccEEeEEEECCEEEEe
Confidence 3344144445599999999999999999999999888999999999999999999999998899999999987777654
No 192
>3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans}
Probab=99.56 E-value=5.8e-15 Score=141.30 Aligned_cols=77 Identities=23% Similarity=0.444 Sum_probs=69.8
Q ss_pred CCEEEEEeeCCeEEEEeCCCCCCCcccCCc--eecCCEEEccCCCceEECCCCeeecCCCCCCCCeEEEEEEcCeEEEE
Q psy2951 495 TPKTLAQSTTSNIYAVGTKCSHYGAPLVKG--SLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVV 571 (1466)
Q Consensus 495 ~~~~~~~~~~g~~~a~~~~C~H~~~~l~~g--~~~~~~~~Cp~H~~~f~~~~G~~~~~p~~~~l~~~~v~i~~~~~~~~ 571 (1466)
++.+++++.+|+++|++|.|||+|++|++| .++++.|+||||||+|++++|++..+|+..+|+.|+++++++.+|+.
T Consensus 32 g~~v~v~r~~g~~~A~~n~CpH~g~~L~~G~~~~~~~~i~CP~Hg~~Fdl~tG~~~~~P~~~~L~~~~v~v~~g~V~v~ 110 (121)
T 3gce_A 32 GDEVMVVRDGDSVYAISNLCSHAEAYLDMGVFHAESLEIECPLHVGRFDVRTGAPTALPCVLPVRAYDVVVDGTEILVA 110 (121)
T ss_dssp TEEEEEEEETTEEEEEESBCSSSSCBGGGSEEETTTTEEECTTTCCEEETTTCCEEETTCCSCCCBCCEEEETTEEEEC
T ss_pred CEEEEEEEECCEEEEEeCcCCCCCCCCCCCceeecCCEEEcCCCCCEEcCCCccEeCCCCcCCcceEEEEEECCEEEEE
Confidence 455666667999999999999999999999 78888999999999999999999999999999999999988888764
No 193
>2de6_D Ferredoxin component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Pseudomonas resinovorans} PDB: 2de5_D 1vck_A 2de7_D*
Probab=99.55 E-value=1.1e-14 Score=138.05 Aligned_cols=76 Identities=26% Similarity=0.493 Sum_probs=68.2
Q ss_pred EEEEEeeCCeEEEEeCCCCCCCcccCCceecCCEEEccCCCceEECCCCeeecCCCCCCCCeEEEEEEcCeEEEEE
Q psy2951 497 KTLAQSTTSNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVVQ 572 (1466)
Q Consensus 497 ~~~~~~~~g~~~a~~~~C~H~~~~l~~g~~~~~~~~Cp~H~~~f~~~~G~~~~~p~~~~l~~~~v~i~~~~~~~~~ 572 (1466)
.+++++.+|+++|++|.|||+|++|++|.++++.|+||||||+|++++|++..+|+..+|+.|+++++++.+|+..
T Consensus 29 ~v~v~r~~g~~~A~~n~CpH~g~~L~~g~~~~~~i~CP~Hg~~Fdl~tG~~~~~P~~~~L~~~~v~~~~g~V~v~~ 104 (115)
T 2de6_D 29 PLAVYRVGDQFYATEDTCTHGIASLSEGTLDGDVIECPFHGGAFNVCTGMPASSPCTVPLGVFEVEVKEGEVYVAG 104 (115)
T ss_dssp EEEEEEETTEEEEEESBCTTSSCBGGGSEEETTEEECTTTCCEEETTTCCEEETTCCSCCCEEEEEESSSEEEEEE
T ss_pred EEEEEEECCEEEEEeCCCCCCCCCCcCCEEeCCEEECCCCCCEEcCCCcCEeCCCCcCCCCEEEEEEECCEEEEec
Confidence 4555566999999999999999999999998889999999999999999999999988999999998777776644
No 194
>1fqt_A Rieske-type ferredoxin of biphenyl dioxygenase; 2Fe-2S cluster, beta sandwich, oxido; 1.60A {Burkholderia xenovorans} SCOP: b.33.1.1 PDB: 2e4q_A 2e4p_A 2yvj_B*
Probab=99.54 E-value=1.2e-14 Score=137.67 Aligned_cols=76 Identities=22% Similarity=0.445 Sum_probs=67.9
Q ss_pred CCEEEEEeeCCeEEEEeCCCCCCCcccCCc-eecCCEEEccCCCceEECCCCeeecCCCCCCCCeEEEEEEcCeEEE
Q psy2951 495 TPKTLAQSTTSNIYAVGTKCSHYGAPLVKG-SLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVV 570 (1466)
Q Consensus 495 ~~~~~~~~~~g~~~a~~~~C~H~~~~l~~g-~~~~~~~~Cp~H~~~f~~~~G~~~~~p~~~~l~~~~v~i~~~~~~~ 570 (1466)
++.+++++.+|+++|++|.|||+|++|++| .++++.++||||||+|++++|++..+|+..+|+.|+++++++.+|+
T Consensus 27 g~~i~v~r~~g~~~A~~n~CpH~g~~L~~g~~~~~~~i~CP~Hg~~Fd~~tG~~~~~P~~~~L~~~~v~~~~g~v~v 103 (112)
T 1fqt_A 27 GTSVAIFNVDGELFATQDRCTHGDWSLSDGGYLEGDVVECSLHMGKFCVRTGKVKSPPPCEALKIFPIRIEDNDVLV 103 (112)
T ss_dssp TEEEEEEEETTEEEEEESBCTTSSCBSSTTCCEETTEEECTTTCCEEETTTCCEEESSCCSCCCBCCEEEETTEEEE
T ss_pred CEEEEEEEECCEEEEEECCCCCCCcCCCCCCEEcCCEEECCCCCCEEeCCCCcEeCCCCCCCccEEEEEEECCEEEE
Confidence 345566666999999999999999999999 8888899999999999999999999999889999999998777665
No 195
>1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A
Probab=99.53 E-value=1.9e-14 Score=136.09 Aligned_cols=76 Identities=28% Similarity=0.373 Sum_probs=66.8
Q ss_pred CCEEEEEee-CCeEEEEeCCCCCCCcccCCceecCCEEEccCCCceEECCCCeeecCCCCCCCCeEEEEEEcCeEEEE
Q psy2951 495 TPKTLAQST-TSNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVV 571 (1466)
Q Consensus 495 ~~~~~~~~~-~g~~~a~~~~C~H~~~~l~~g~~~~~~~~Cp~H~~~f~~~~G~~~~~p~~~~l~~~~v~i~~~~~~~~ 571 (1466)
++.+++++. +|+++|++|.|||+|++|++|.++++.++||||||+|+++||++.. |+..+|+.|+++++++.+|+.
T Consensus 24 g~~v~v~r~~~g~~~A~~~~CpH~g~~L~~g~~~~~~i~Cp~Hg~~Fd~~tG~~~~-p~~~~L~~~~v~~~~g~v~v~ 100 (111)
T 1vm9_A 24 GTEVLIVNSEEHGVKAYQAMCPHQEILLSEGSYEGGVITCRAHLWTFNDGTGHGIN-PDDAALAEYPVEVKGDDIYVS 100 (111)
T ss_dssp CCEEEEEEETTTEEEEEESBCSSSSCBGGGSEEETTEEECTTTCCEEETTTCBBSS-SSSCBCCEECEEEETTEEEEC
T ss_pred CCEEEEEEeCCCeEEEEeCcCCCCCcCCCCceEcCCEEEcCCCCCEEeCCCccCCC-CCcCCcCEEEEEEECCEEEEe
Confidence 345555554 9999999999999999999999988899999999999999999988 888899999999987777653
No 196
>4aiv_A Probable nitrite reductase [NAD(P)H] small subuni; oxidoreductase, nitrite metabolism; 2.00A {Mycobacterium tuberculosis}
Probab=99.53 E-value=1.4e-14 Score=137.04 Aligned_cols=81 Identities=20% Similarity=0.272 Sum_probs=63.6
Q ss_pred cCCCCCEEEEEeeCCeEEEEeCCCCCCCcccCCceecC-----CEEEccCCCceEECCCCeeecCCCCCCCCeEEEEEEc
Q psy2951 491 PASSTPKTLAQSTTSNIYAVGTKCSHYGAPLVKGSLGD-----GRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQN 565 (1466)
Q Consensus 491 ~~~~~~~~~~~~~~g~~~a~~~~C~H~~~~l~~g~~~~-----~~~~Cp~H~~~f~~~~G~~~~~p~~~~l~~~~v~i~~ 565 (1466)
..++..+++++..+|++||++|+|||++++|..+.+.+ ..|.||||+|+|+++||+|.+.|+ .+++.|+++++.
T Consensus 29 ~~~G~~v~l~r~~dG~v~A~~n~CpH~ga~L~~~~~~~~~~~~~~i~CP~Hg~~Fdl~tG~~~~~p~-~~l~~ypv~ve~ 107 (119)
T 4aiv_A 29 LDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRGGRAMVQSPILKQAFALDDGSCLDDPR-VSVPVYPARVTP 107 (119)
T ss_dssp CTTSCEEEEEECTTSCEEEEESBCTTTCCBCGGGSEEEEETTEEEEECTTTCCEEETTTCBBSSCTT-CBCCEECEEECT
T ss_pred EcCCcEEEEEEcCCCeEEEEECCCCCCCCccccCceeccccCCCEEECCCCCCEEeCCCCcCcCCCC-CccceEEEEEEe
Confidence 33444455555568999999999999999997765543 259999999999999999999887 478999999874
Q ss_pred -CeEEEEE
Q psy2951 566 -DDSVVVQ 572 (1466)
Q Consensus 566 -~~~~~~~ 572 (1466)
|.+|+..
T Consensus 108 dG~V~V~~ 115 (119)
T 4aiv_A 108 EGRIQVAR 115 (119)
T ss_dssp TSEEEEEE
T ss_pred CCEEEEec
Confidence 5566543
No 197
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.49 E-value=5.3e-15 Score=180.02 Aligned_cols=226 Identities=12% Similarity=0.082 Sum_probs=126.6
Q ss_pred HhHhhhCCcEEEEceEEEEeccccccEE---Ec-cCCCEEecCEEEEcCCCCCCcCCCCCCCCcEEEecCHHHHHhhc--
Q psy2951 655 EEFYKDNDIHVIKGKKIISDSELNEKKI---KL-QDGTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIA-- 728 (1466)
Q Consensus 655 ~~~~~~~gv~~~~~~~v~~i~~~~~~~v---~~-~~~~~~~~d~lviAtG~~~~~~~~~~g~~~~~~~~~~~~~~~~~-- 728 (1466)
.+.+++.|++++.++.| .+ ..++..+ .+ .++.++.+|+||+|||+.+..++.. ......+...+..+.+..
T Consensus 126 ~~~~~~~gv~i~~~~~v-~l-~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~~-~~~~~~tGdgi~~a~~aGa~ 202 (472)
T 2e5v_A 126 LKLAREEGIPIIEDRLV-EI-RVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEYS-STQSTNIGDGMAIAFKAGTI 202 (472)
T ss_dssp HHHHHHTTCCEECCCEE-EE-EEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSSB-SSCTTCSCHHHHHHHHTTCC
T ss_pred HHHHHhCCCEEEECcEE-EE-EEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCccc-cCCCCCchHHHHHHHHcCCC
Confidence 34445679999999988 87 4333332 22 2233578999999999887666543 111111111111221110
Q ss_pred ----ccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHH--------HHHHHHHHHHhcCcEEEcc
Q psy2951 729 ----PHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKE--------VGERITKLFESKGVKFVMK 796 (1466)
Q Consensus 729 ----~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~--------~~~~~~~~l~~~gv~~~~~ 796 (1466)
+.......++++|+| +++++..++..|..+ +..+.++++. .++++ +...+.+.+++.|. ++++
T Consensus 203 ~~d~e~~q~~p~~~~~ggg--~~~~ae~~~~~G~~~-v~~~g~rf~~-~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld 277 (472)
T 2e5v_A 203 LADMEFVQFHPTVTSLDGE--VFLLTETLRGEGAQI-INENGERFLF-NYDKRGELAPRDILSRAIYIEMLKGHK-VFID 277 (472)
T ss_dssp EECTTCEEEEEEEECGGGC--CEECCTHHHHTTCEE-EETTCCCGGG-GTCTTGGGSCHHHHHHHHHHHHHHTCC-EEEE
T ss_pred EeCCcceEEEeEEEccCCC--ceeeehhhcCCceEE-ECCCCCCCCc-cCCcccCcCchhHHHHHHHHHHHhCCc-EEEe
Confidence 000001234455766 888888888888877 6667766653 22322 24556666666653 2221
Q ss_pred ceEEEEEecCCCceEEEECCCCcEEe-cCEEEEccccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccC
Q psy2951 797 ANVSSFEKNEKNDVTAANLDNGTTIP-ADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAP 875 (1466)
Q Consensus 797 ~~v~~i~~~~~~~~~~v~~~~g~~i~-~D~vi~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~ 875 (1466)
... + + . + .+.++ .|.++++.|..|+ ++++.........|.|.||+++||+.|+|||+|||+...
T Consensus 278 ~~~--~----~-~-----~--~~~~~~~~~~~~~~G~dp~-~~i~v~p~~~~~~GGI~vd~~~~t~ipgLyAaGd~a~~~ 342 (472)
T 2e5v_A 278 LSK--I----E-D-----F--ERKFPVVAKYLARHGHNYK-VKIPIFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDSG 342 (472)
T ss_dssp CTT--C----T-T-----H--HHHCHHHHHHHHHTTCCTT-SCEECEEEEEEESCEEECCTTCBCSSBTEEECGGGEECS
T ss_pred ccc--h----H-H-----H--HHHhHHHHHHHHHhCcCcc-cceEeehhhceeCCCeEECCCCccccCCEEecchhcccc
Confidence 110 0 0 0 0 01233 4677888899998 665433233344689999999999999999999998732
Q ss_pred CcccCCceeeeccHHHHHHHHHHHHHHhcc
Q psy2951 876 LHSFYNKNASIGHYQLAQYHGRIAALNMVE 905 (1466)
Q Consensus 876 ~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~ 905 (1466)
.. +..+........+...|+.|+.++++
T Consensus 343 ~h--g~~rl~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 343 LH--GANRLASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp SS--TTSCCTTHHHHHHHHHHHHGGGTTTS
T ss_pred cC--CCCCCCcccHHHHHHHHHHHHHHHHh
Confidence 11 11111111223444556666666654
No 198
>3c0d_A Putative nitrite reductase NADPH (small subunit) oxidoreductase protein; NESG, VPR162, Q87HB1, XRAY, structure; 2.40A {Vibrio parahaemolyticus rimd 2210633} SCOP: b.33.1.3
Probab=99.48 E-value=3.5e-14 Score=135.54 Aligned_cols=75 Identities=20% Similarity=0.269 Sum_probs=64.2
Q ss_pred CEEEEEe-eCCeEEEEeCCCCCCCc-ccCCceecCC----EEEccCCCceEECCCCeeecCCCCCCCCeEEEEEEcCeEE
Q psy2951 496 PKTLAQS-TTSNIYAVGTKCSHYGA-PLVKGSLGDG----RVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSV 569 (1466)
Q Consensus 496 ~~~~~~~-~~g~~~a~~~~C~H~~~-~l~~g~~~~~----~~~Cp~H~~~f~~~~G~~~~~p~~~~l~~~~v~i~~~~~~ 569 (1466)
..+++++ .+|+++|++|.|||+++ +|+.|.+++. .|+||||||+|++++|++..+|+ .+|+.|+++++++.+|
T Consensus 28 ~~v~v~r~~~G~~~A~~n~CpH~g~~~L~~G~~~~~~g~~~i~CP~Hg~~Fdl~tG~~~~~P~-~~l~~~~v~v~~g~V~ 106 (119)
T 3c0d_A 28 ERVALFYIPDSGVYAVQDWDPIGKAYVMSRGIVGDINGEMCVASPLYKQHFSLKSGQCLEDEA-HCLKTWRVTVDDNQVC 106 (119)
T ss_dssp EEEEEEEETTTEEEEEESEETTTTEECGGGSEEEESSSSEEEECTTTCCEEETTTCBBSSCTT-CBCCEECEEESSSEEE
T ss_pred eEEEEEEecCCeEEEEeCCCCCCCCccCCCeEEcCCCCCeEEECCCCCCEEECCCCcCCCCCC-ceeeEEEEEEECCEEE
Confidence 3445555 59999999999999999 7999998753 89999999999999999999998 7899999999777666
Q ss_pred EE
Q psy2951 570 VV 571 (1466)
Q Consensus 570 ~~ 571 (1466)
+.
T Consensus 107 v~ 108 (119)
T 3c0d_A 107 YL 108 (119)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 199
>2jo6_A Nitrite reductase [NAD(P)H] small subunit; all beta, ISP domain, rieske iron-sulfur protein, 3-layer sandwich, structural genomics, PSI-2; NMR {Escherichia coli} SCOP: b.33.1.3
Probab=99.47 E-value=8.9e-14 Score=131.92 Aligned_cols=74 Identities=14% Similarity=0.215 Sum_probs=63.6
Q ss_pred CEEEEEee-CC-eEEEEeCCCCCCCc-ccCCceec---CC-EEEccCCCceEECCCCeeecCCCCCCCCeEEEEEEcCeE
Q psy2951 496 PKTLAQST-TS-NIYAVGTKCSHYGA-PLVKGSLG---DG-RVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDS 568 (1466)
Q Consensus 496 ~~~~~~~~-~g-~~~a~~~~C~H~~~-~l~~g~~~---~~-~~~Cp~H~~~f~~~~G~~~~~p~~~~l~~~~v~i~~~~~ 568 (1466)
..+++++. +| +++|++|.|||+++ +|++|.+. +. .|.||||||+|++++|++...|+ .+|+.|+++++++.+
T Consensus 29 ~~i~v~r~~~g~~~~A~~n~CpH~g~~~L~~G~~~~~~g~~~i~CP~Hg~~Fd~~tG~~~~~P~-~~l~~~~v~v~~g~V 107 (113)
T 2jo6_A 29 EQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQ-FSVKHYEARVKDGVV 107 (113)
T ss_dssp EEEEEEECSSSSCCEEEESSCSSSCCSCSTTSEEEEETTEEEEEETTTTEEEETTTTEETTTTT-TCCCEEEEEEETTEE
T ss_pred EEEEEEEECCCCEEEEEeCcCCCCCCcccCCeEEeccCCCcEEECCCCCCEEeCCCccCCCCCc-ccccEEeEEEECCEE
Confidence 34455554 89 69999999999999 79999886 23 89999999999999999999998 789999999988777
Q ss_pred EE
Q psy2951 569 VV 570 (1466)
Q Consensus 569 ~~ 570 (1466)
|+
T Consensus 108 ~v 109 (113)
T 2jo6_A 108 QL 109 (113)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 200
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.46 E-value=7.3e-15 Score=178.84 Aligned_cols=222 Identities=13% Similarity=0.087 Sum_probs=129.7
Q ss_pred ccCCcEEEcCCeEEEeecCCCCeE---Eec-CCcEEecCeEEEecCCCCCcCCCCCCCCcEEEecCHHHHHhhhcccCC-
Q psy2951 1130 KDNDIHVIKGKKIISDSELNEKKI---KLQ-DGTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITP- 1204 (1466)
Q Consensus 1130 ~~~~v~~~~~~~v~~i~d~~~~~v---~~~-~g~~~~yd~lvlAtG~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~- 1204 (1466)
++.+++++.+++| ++ ..+...+ .+. ++.++.+|.+|+|||+.+..++.+.+... .+.....-+.+.-..+..
T Consensus 130 ~~~gv~i~~~~~v-~l-~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~~~~~~~-~tGdgi~~a~~aGa~~~d~ 206 (472)
T 2e5v_A 130 REEGIPIIEDRLV-EI-RVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEYSSTQST-NIGDGMAIAFKAGTILADM 206 (472)
T ss_dssp HHTTCCEECCCEE-EE-EEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSSBSSCTT-CSCHHHHHHHHTTCCEECT
T ss_pred HhCCCEEEECcEE-EE-EEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCccccCCCC-CchHHHHHHHHcCCCEeCC
Confidence 4569999999999 98 6655544 332 22357899999999997776554311110 011111111111111111
Q ss_pred -----CCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCccccc------H-HHHHHHHHHHHhCCcEEEcCceEEE
Q psy2951 1205 -----ESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLG------K-EVGERITKLFESKGVKFVMKANVSS 1272 (1466)
Q Consensus 1205 -----~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~------~-~~~~~l~~~~~~~gv~~~~~~~v~~ 1272 (1466)
...++++|+| +++++..++..|..+ +..+.++.+.+.-+ . .++..+.+.+++.|. ++++..
T Consensus 207 e~~q~~p~~~~~ggg--~~~~ae~~~~~G~~~-v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~~--- 279 (472)
T 2e5v_A 207 EFVQFHPTVTSLDGE--VFLLTETLRGEGAQI-INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHK-VFIDLS--- 279 (472)
T ss_dssp TCEEEEEEEECGGGC--CEECCTHHHHTTCEE-EETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCC-EEEECT---
T ss_pred cceEEEeEEEccCCC--ceeeehhhcCCceEE-ECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCc-EEEecc---
Confidence 1234556766 788888888888887 77787777643211 1 135666666766663 222111
Q ss_pred EEecCCCcEEEEEcCCCCeee-cCEEEEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCC
Q psy2951 1273 FEKNEKNDVTAANLDNGTTIP-ADLVIVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFY 1351 (1466)
Q Consensus 1273 i~~~~~g~~~~v~l~~g~~i~-~D~vv~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~ 1351 (1466)
.-.. + .++++ .|.++++.|..|+ +++.-........|+|.||+++||+.|+|||+|||+.....
T Consensus 280 ----~~~~-----~--~~~~~~~~~~~~~~G~dp~-~~i~v~p~~~~~~GGI~vd~~~~t~ipgLyAaGd~a~~~~h--- 344 (472)
T 2e5v_A 280 ----KIED-----F--ERKFPVVAKYLARHGHNYK-VKIPIFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDSGLH--- 344 (472)
T ss_dssp ----TCTT-----H--HHHCHHHHHHHHHTTCCTT-SCEECEEEEEEESCEEECCTTCBCSSBTEEECGGGEECSSS---
T ss_pred ----chHH-----H--HHHhHHHHHHHHHhCcCcc-cceEeehhhceeCCCeEECCCCccccCCEEecchhcccccC---
Confidence 0000 1 12343 4677888899999 76554322334467899999999999999999999873211
Q ss_pred Cceeeee--cHHHHHHHHHHHHHHhcCC
Q psy2951 1352 NKNASIG--HYQLAQYHGRIAALNMVEK 1377 (1466)
Q Consensus 1352 ~~~~~~~--~~~~A~~qa~~aa~~i~g~ 1377 (1466)
|.. +.. .+..+...|+.|++++++.
T Consensus 345 g~~-rl~~~sl~~~~v~G~~a~~~~a~~ 371 (472)
T 2e5v_A 345 GAN-RLASNSLLEGLVFGINLPRYVDSS 371 (472)
T ss_dssp TTS-CCTTHHHHHHHHHHHHGGGTTTSC
T ss_pred CCC-CCCcccHHHHHHHHHHHHHHHHhh
Confidence 111 222 2445555677777777654
No 201
>4aay_B AROB; oxidoreductase, rieske, iron sulfur, molybdopterin; HET: MGD; 2.70A {Rhizobium species}
Probab=99.44 E-value=2.1e-13 Score=137.32 Aligned_cols=79 Identities=22% Similarity=0.317 Sum_probs=67.8
Q ss_pred CCEEEEEee----------CCeEEEEeCCCCCCCcccCCceecCCEEEccCCCceEECC-CCeeecCCCCCCCCeEEEEE
Q psy2951 495 TPKTLAQST----------TSNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIA-TGDIEDFPGMDSLPCYKVTI 563 (1466)
Q Consensus 495 ~~~~~~~~~----------~g~~~a~~~~C~H~~~~l~~g~~~~~~~~Cp~H~~~f~~~-~G~~~~~p~~~~l~~~~v~i 563 (1466)
+..+++++. +|+++|++|.|||+|++|.+| .+++.|.||||+|+|+++ +|++..+|+..+|+.|++++
T Consensus 74 ~~pv~v~R~g~~~~~~r~~~G~v~A~~n~CpH~G~~L~~g-~~~~~i~CP~Hg~~Fd~~~tG~~~~gPa~~~L~~y~v~v 152 (175)
T 4aay_B 74 DAAGVLLKLGTRVEGGVGPDGDIVGFSTICPHKGFPLSYS-ADNKTFNCPGHFSVFDPEKGGQQVWGQATQNLPQYVLRV 152 (175)
T ss_dssp TSEEEEEECSSCCTTCBTTTTCEEEEECBCTTTCCBCEEE-TTTTEEECTTTCCEEEGGGTTEEEECSCSSCCCBEEEEE
T ss_pred CCEEEEEEcccccccccCCCCEEEEEeCCCCCCCCCCccC-CCCCEEEcCCCCCEECCCCCceEecCCCCCCcCEEEEEE
Confidence 445666665 899999999999999999988 677899999999999998 99999999999999999999
Q ss_pred -EcCeEEEEEcc
Q psy2951 564 -QNDDSVVVQAR 574 (1466)
Q Consensus 564 -~~~~~~~~~~~ 574 (1466)
+++.+|....+
T Consensus 153 d~dG~V~avg~~ 164 (175)
T 4aay_B 153 ADNGDIFAEGVD 164 (175)
T ss_dssp CTTSEEEEEEES
T ss_pred EcCCEEEEEEcc
Confidence 46776655433
No 202
>1rie_A Rieske iron-sulfur protein; oxidoreductase, cytochrome BC1 complex, histidine ligands, rieske iron-sulfur cluster, electron transport; 1.50A {Bos taurus} SCOP: b.33.1.1
Probab=99.42 E-value=1.2e-13 Score=133.19 Aligned_cols=66 Identities=21% Similarity=0.351 Sum_probs=60.2
Q ss_pred CCeEEEEeCCCCCCCcccCCceecCCEEEccCCCceEECCCCeeecCCCCCCCCeEEEEE-EcCeEEE
Q psy2951 504 TSNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTI-QNDDSVV 570 (1466)
Q Consensus 504 ~g~~~a~~~~C~H~~~~l~~g~~~~~~~~Cp~H~~~f~~~~G~~~~~p~~~~l~~~~v~i-~~~~~~~ 570 (1466)
+|+++|++|.|||+|++|.+|..+++.+.||||||+|++ +|++..+|+..+|+.|++++ +++.+++
T Consensus 62 ~g~~~a~~~~C~H~g~~l~~g~~~~~~i~CP~Hg~~fd~-~G~~~~~P~~~~l~~~~v~v~~~~~v~v 128 (129)
T 1rie_A 62 KPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDA-SGRIRKGPAPLNLEVPSYEFTSDDMVIV 128 (129)
T ss_dssp STTEEEEECCCTTTSCCCEETCTTTEEEEETTTTEEEET-TCCEEESSCCSCCCCCCEEESSSSEEEE
T ss_pred CCeEEEEECccCCCCeecccccCCCCEEEcCCCCCEEcC-CCCEeeCCCCCCCCceeEEEEeCCEEEE
Confidence 899999999999999999999888789999999999999 89999999999999999998 5665543
No 203
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.42 E-value=9.8e-16 Score=178.11 Aligned_cols=259 Identities=12% Similarity=0.018 Sum_probs=150.9
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHH--cCCCccEEEEcCCCCCCCCCCccchhcccCcccccccCHhHhhhCCcEEEEce
Q psy2951 592 SGNKDTFIVVGGGPSGATCVETLRQ--NGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGK 669 (1466)
Q Consensus 592 ~~~~~~vvVIGgG~AGl~aA~~l~~--~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~ 669 (1466)
....+||+|||||||||+||++|++ .|++ |+++|+.+.+++...... ...+...+......++++.|+++..+.
T Consensus 62 ~~~~~DV~IIGaGPAGlsAA~~la~~r~G~~--V~viEk~~~~GG~~~~~~--~~~~~~~l~~~~~~~~~e~Gv~~~~~~ 137 (326)
T 3fpz_A 62 KFAVSDVIIVGAGSSGLSAAYVIAKNRPDLK--VCIIESSVAPGGGSWLGG--QLFSAMVMRKPAHLFLQELEIPYEDEG 137 (326)
T ss_dssp HTTEESEEEECCSHHHHHHHHHHHHHCTTSC--EEEECSSSSCCTTTTCCS--TTCCCEEEETTTHHHHHHTTCCCEECS
T ss_pred hccCCCEEEECCCHHHHHHHHHHHHhCCCCe--EEEEECCCCCCceEEeCC--ccCCHHHHHHHHHHHHHHcCCEEEECC
Confidence 3456899999999999999999985 4877 889998876654332211 112223333445566778888876554
Q ss_pred EEEEeccccccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHH
Q psy2951 670 KIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEA 749 (1466)
Q Consensus 670 ~v~~i~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~ 749 (1466)
.. ....+.++++++..++.+.++ |.+ .+......++.........+++++|+|+|+++++.
T Consensus 138 ~~-----------------~~~~~~~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~ 198 (326)
T 3fpz_A 138 DY-----------------VVVKHAALFISTVLSKVLQLP-NVK-LFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQ 198 (326)
T ss_dssp SE-----------------EEESCHHHHHHHHHHHHHTST-TEE-EETTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHT
T ss_pred cc-----------------eecceeEEEEcchhhhccccc-cce-eecccccceeeccCCcccCCCEEEEEccCceeeeh
Confidence 21 223344566677666666666 654 00000111111223334568999999999999999
Q ss_pred HHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEc
Q psy2951 750 AAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVG 829 (1466)
Q Consensus 750 A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a 829 (1466)
|..+...+.+++++.+......... +.. .. ..+.... +.++... .......+.+|.+..+
T Consensus 199 a~~~~~~~~~v~i~~~~~~~~~~~~-----------~~~-~~-----~~~~~~~-g~~~~~~--~~~~~~~~~~~~~~~~ 258 (326)
T 3fpz_A 199 AHGTQCAMDPNVIELAGYKNDGTRD-----------LSQ-KH-----GVILSTT-GHDGPFG--AFCAKRIVDIDQNQKL 258 (326)
T ss_dssp CTTSSSCCCCEEEEESCBCTTSSBC-----------TTS-CC-----CEEEECC-CSCSSSC--SHHHHHHHHHCTTCCC
T ss_pred hhhhhhccCcEEEEeeccccccccc-----------cee-ec-----ceEEEEe-cceeeEe--ecceeEEEecCceeee
Confidence 9999999999999877653321100 000 00 1111111 1111000 0001123556666666
Q ss_pred cccccCccccccCCceeeCCCcEEeCCCCCCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhcc
Q psy2951 830 IGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVE 905 (1466)
Q Consensus 830 ~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~ 905 (1466)
.|.+|... ... .+.+.++..++|+.|+|||+||++..-.... ... +....++.+|+.||+.|+.
T Consensus 259 ~g~~~~~~-------~~~-e~~iv~~~~~~t~vpGv~aaGDaa~~v~g~~---rmG-p~~g~mi~SG~~AAe~I~~ 322 (326)
T 3fpz_A 259 GGMKGLDM-------NHA-EHDVVIHSGAYAGVDNMYFAGMEVAELDGLN---RMG-PTFGAMALSGVHAAEQILK 322 (326)
T ss_dssp CCCCCBCH-------HHH-HHHHHHHCEECTTSBTEEECTHHHHHHHTCC---BCC-SCCHHHHHHHHHHHHHHHH
T ss_pred cceecccc-------ccc-CCeEEECCCeEECCCCEEEEchHhccccCCC---cCc-hHHHHHHHHHHHHHHHHHH
Confidence 67665421 111 2457778889999999999999976322110 000 1223567889999998863
No 204
>1g8k_B Arsenite oxidase; molybdopterin, [3Fe-4S] cluster, [2Fe-2S] rieske, oxidoreductase; HET: MGD; 1.64A {Alcaligenes faecalis} SCOP: b.33.1.1 PDB: 1g8j_B*
Probab=99.40 E-value=8.4e-13 Score=128.03 Aligned_cols=79 Identities=20% Similarity=0.299 Sum_probs=66.5
Q ss_pred CCEEEEEee----------CCeEEEEeCCCCCCCcccCCceecCCEEEccCCCceEECC-CCeeecCCCCCCCCeEEEEE
Q psy2951 495 TPKTLAQST----------TSNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIA-TGDIEDFPGMDSLPCYKVTI 563 (1466)
Q Consensus 495 ~~~~~~~~~----------~g~~~a~~~~C~H~~~~l~~g~~~~~~~~Cp~H~~~f~~~-~G~~~~~p~~~~l~~~~v~i 563 (1466)
+..+++++. +|+++|++|.|||+|++|++. .+++.+.||||||+|+++ +|++..+|+..+|+.|++++
T Consensus 31 g~~v~v~r~~~~~~~~~~~~g~~~A~~n~CpH~g~~L~~~-~~~~~i~CP~Hg~~Fd~~~~G~~~~gP~~~~L~~~~v~v 109 (133)
T 1g8k_B 31 SSPCVAVKLGAPVPGGVGPDDDIVAYSVLCTHMGCPTSYD-SSSKTFSCPCHFTEFDAEKAGQMICGEATADLPRVLLRY 109 (133)
T ss_dssp TSEEEEEECSSCCTTCBTTTTCEEEEECBCTTTCCBCEEE-TTTTEEECTTTCCEEEGGGTTEEEESSCSSCCCEEEEEE
T ss_pred CceEEEEEccccccccccCCCEEEEEeCcCCCCCCCCCcc-cCCCEEECCCCCCEECCCCCCCEEcCCCCCCCCEEEEEE
Confidence 455666665 899999999999999999873 567799999999999998 89999999999999999999
Q ss_pred Ec--CeEEEEEcc
Q psy2951 564 QN--DDSVVVQAR 574 (1466)
Q Consensus 564 ~~--~~~~~~~~~ 574 (1466)
++ +.+++...+
T Consensus 110 ~~~g~~V~v~g~~ 122 (133)
T 1g8k_B 110 DAASDALTAVGVD 122 (133)
T ss_dssp ETTTTEEEEEEEE
T ss_pred ECCCCEEEEEecc
Confidence 84 446665444
No 205
>2jza_A Nitrite reductase [NAD(P)H] small subunit; ISP domain, rieske iron-sulfur protein, 3-layer beta- sandwich; NMR {Pectobacterium atrosepticum SCRI1043} SCOP: b.33.1.3
Probab=99.40 E-value=3.5e-13 Score=130.65 Aligned_cols=77 Identities=17% Similarity=0.210 Sum_probs=64.3
Q ss_pred CCEEEEEee-CC-eEEEEeCCCCCCCc-ccCCceec---C-CEEEccCCCceEECCCCeeecCCCCCCCCeEEEEEEcCe
Q psy2951 495 TPKTLAQST-TS-NIYAVGTKCSHYGA-PLVKGSLG---D-GRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDD 567 (1466)
Q Consensus 495 ~~~~~~~~~-~g-~~~a~~~~C~H~~~-~l~~g~~~---~-~~~~Cp~H~~~f~~~~G~~~~~p~~~~l~~~~v~i~~~~ 567 (1466)
+..+++++. +| +++|++|+|||+|+ +|+.|.+. + ..|+||||||+|++++|++..+|+ .+|+.|+++++++.
T Consensus 25 g~~i~v~r~~~g~~v~A~~n~CpH~g~~~L~~G~~~~~~g~~~i~CP~Hg~~Fdl~tG~~~~~P~-~~L~~~~v~v~~g~ 103 (130)
T 2jza_A 25 QQQIAVFRPRNDEQVYAISNIDPFAQASVLSRGIVAEHQDDLWVASPLKKQHFRLYDGFCLEDGA-YSVAAYDTQVTNGN 103 (130)
T ss_dssp TEEEEEEBCSSSSCCEEEBCCCTTTSSGGGTSSEEEESSSSEEEECSSSCCEEETTTCCBSSCCS-SCCBCCCEEESSSE
T ss_pred CcEEEEEEECCCCEEEEEeCcCCCCCCCcCCCccCcccCCCeEEECCCCCCEEeCCCcCCCCCCc-CcceEEEEEEECCE
Confidence 344555554 77 89999999999999 59999886 3 289999999999999999999998 78999999987777
Q ss_pred EEEEE
Q psy2951 568 SVVVQ 572 (1466)
Q Consensus 568 ~~~~~ 572 (1466)
+|+..
T Consensus 104 V~V~~ 108 (130)
T 2jza_A 104 VQISI 108 (130)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 66543
No 206
>1rfs_A Rieske protein; iron-sulfur protein, electron transport; 1.83A {Spinacia oleracea} SCOP: b.33.1.1 PDB: 1q90_C*
Probab=99.39 E-value=3.8e-13 Score=131.05 Aligned_cols=77 Identities=21% Similarity=0.449 Sum_probs=67.9
Q ss_pred CCCEEEEEeeCCeE--EEEeCCCCCCCcccCCceecCCEEEccCCCceEECCCCeeecCCCCCCCCeEEEEEEcCeEEEE
Q psy2951 494 STPKTLAQSTTSNI--YAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVV 571 (1466)
Q Consensus 494 ~~~~~~~~~~~g~~--~a~~~~C~H~~~~l~~g~~~~~~~~Cp~H~~~f~~~~G~~~~~p~~~~l~~~~v~i~~~~~~~~ 571 (1466)
++..+++++.+|++ +|++|.|||++++|+++. .++.++||||||+|+. +|++..+|+..+|+.|+++++++.+++.
T Consensus 45 g~~~ilv~~~~G~i~~~A~~n~CpH~g~~L~~g~-~~~~i~CP~Hg~~Fd~-tG~~~~~P~~~~L~~~~v~v~~g~V~V~ 122 (139)
T 1rfs_A 45 GDPTYLVVESDKTLATFGINAVCTHLGCVVPFNA-AENKFICPCHGSQYNN-QGRVVRGPAPLSLALAHCDVDDGKVVFV 122 (139)
T ss_dssp GCEEEEEBCTTSSBCSEEEECBCTTTCCBCCEET-TTTEEECTTTCCEEET-TCCEEESSCCSCCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEeCCCcEEEEEEeCcCCCCCCCCccCC-CCCEEEcCCCCCEECC-CCCCccCCCCCCCCEEEEEEECCEEEEE
Confidence 45567777889999 999999999999999877 5679999999999996 8999999998999999999988877765
Q ss_pred E
Q psy2951 572 Q 572 (1466)
Q Consensus 572 ~ 572 (1466)
.
T Consensus 123 ~ 123 (139)
T 1rfs_A 123 P 123 (139)
T ss_dssp E
T ss_pred e
Confidence 3
No 207
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.39 E-value=1.7e-12 Score=142.22 Aligned_cols=157 Identities=20% Similarity=0.270 Sum_probs=114.7
Q ss_pred CeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCC----------------cccc-------cHHHHHHHHHHHHhC-C
Q psy2951 1206 SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPF----------------QESL-------GKEVGERITKLFESK-G 1261 (1466)
Q Consensus 1206 ~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~----------------~~~~-------~~~~~~~l~~~~~~~-g 1261 (1466)
.+|+|||+|++|+++|..|++.|.+|+++++..... .+.+ ...+.+.+.+.+++. |
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~g 83 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRP 83 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCC
Confidence 479999999999999999999999999999862110 0011 136677888889887 9
Q ss_pred cEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCc--------------------cc---cccCCceee
Q psy2951 1262 VKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNT--------------------NY---LDGKGVELN 1318 (1466)
Q Consensus 1262 v~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~--------------------~~---~~~~gl~~~ 1318 (1466)
++++ +.+|+++. .+++++..|.+.+|+++++|.||+|+|..++. ++ +++.|+.++
T Consensus 84 v~i~-~~~v~~i~-~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~~ 161 (232)
T 2cul_A 84 LHLF-QATATGLL-LEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGFRFV 161 (232)
T ss_dssp EEEE-ECCEEEEE-EETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTCCEE
T ss_pred cEEE-EeEEEEEE-EeCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCCeEE
Confidence 9998 57999997 44556667888999899999999999994432 22 234555544
Q ss_pred CCCeEE---------------eC-------CCccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcC
Q psy2951 1319 GQKAVV---------------VN-------EYLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVE 1376 (1466)
Q Consensus 1319 ~~G~i~---------------vd-------~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g 1376 (1466)
...++. +. ....|++|+|||+|||+ ... .|..|..||+.+|.+|+.
T Consensus 162 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g-----------~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 162 EREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REG-----------DYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp EEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCC-----------CHHHHHHHHHHHHHHHHH
T ss_pred ccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCc-----------cHHHHHHHHHHHHHHHHh
Confidence 221111 11 01236899999999999 432 457899999999999874
No 208
>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B*
Probab=99.36 E-value=4.2e-13 Score=125.57 Aligned_cols=73 Identities=23% Similarity=0.477 Sum_probs=67.4
Q ss_pred hhhhhhhhcCCCCCCCccccceeecCCEEEcCCCCceeecCCCccccCCCCCCCCeEEEEEEcCCEEEEEcchh
Q psy2951 974 AERNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVVQARKD 1047 (1466)
Q Consensus 974 ~~g~~~a~~~~C~h~g~~l~~g~~~~~~~~cp~h~~~f~~~~g~~~~~p~~~~l~~~~v~~~~~~~~~~~~~~~ 1047 (1466)
.+|+++|+.+.|||.+++|..|.+.+..+.||||||+|++++|++...|+..+|+.|++++ .++.+++...+.
T Consensus 31 ~~g~~~A~~~~CpH~g~~L~~g~~~~~~i~Cp~Hg~~Fdl~~G~~~~~P~~~~L~~~~v~~-~~g~v~v~~~~~ 103 (106)
T 3dqy_A 31 VDGEFFAVQDTCTHGDWALSDGYLDGDIVECTLHFGKFCVRTGKVKALPACKPIKVFPIKV-EGDEVHVDLDNG 103 (106)
T ss_dssp ETTEEEEEESBCSSSSCBGGGSEEETTEEECTTTCCEEETTTCCEEETTCCSCCCEECEEE-ETTEEEECGGGC
T ss_pred ECCEEEEEeCcCCCCCCCCcCcEEeCCEEECCCCCCEEeCCCCCEeCCCCCCCccEEEEEE-ECCEEEEEcccc
Confidence 4789999999999999999999999999999999999999999999999999999999999 688999876543
No 209
>3d89_A Rieske domain-containing protein; CAsp target, rieske ferredoxin, [2Fe-2S] cluster, protein ST initiative, PSI; 2.07A {Mus musculus}
Probab=99.35 E-value=1.3e-12 Score=131.74 Aligned_cols=78 Identities=24% Similarity=0.392 Sum_probs=63.1
Q ss_pred CCEEEEEeeCCeEEEEeCCCCCCCcccCCceecC----CEEEccCCCceEECCCCeeec---CC----CC-------CCC
Q psy2951 495 TPKTLAQSTTSNIYAVGTKCSHYGAPLVKGSLGD----GRVRCPWHGACFNIATGDIED---FP----GM-------DSL 556 (1466)
Q Consensus 495 ~~~~~~~~~~g~~~a~~~~C~H~~~~l~~g~~~~----~~~~Cp~H~~~f~~~~G~~~~---~p----~~-------~~l 556 (1466)
+..++++|.+|+++|++|+|||+|++|++|.+++ +.|+||||||+|++++|++.. .| +. .+|
T Consensus 38 g~~i~v~r~~G~v~A~~n~CpH~g~~L~~G~~~~~~g~~~i~CP~Hgw~Fdl~tG~~~~~~i~P~~~~~~~~~~~~~~~L 117 (157)
T 3d89_A 38 DREVVIFYHKGEYHAMDIRCYHSGGPLHLGEIEDFNGQSCIVCPWHKYKITLATGEGLYQSINPKDPSAKPKWCSKGVKQ 117 (157)
T ss_dssp TEEEEEEEETTEEEEEESBCTTTCCBGGGSEEEEETTEEEEECTTTCCEEETTTCEEEEEECCCC-----CEEEEEEECS
T ss_pred CEEEEEEEECCEEEEEeCCCCCCCCCCcCCEecCcCCCCEEECCCCCCEEecCCcCEEEeccCCCccccccccccccCcc
Confidence 3445555589999999999999999999998863 589999999999999999874 13 32 368
Q ss_pred CeEEEEEEcCeEEEEE
Q psy2951 557 PCYKVTIQNDDSVVVQ 572 (1466)
Q Consensus 557 ~~~~v~i~~~~~~~~~ 572 (1466)
+.|+++++++.+|+..
T Consensus 118 ~~~~v~v~~G~V~V~~ 133 (157)
T 3d89_A 118 RIHTVKVDNGNIYVTL 133 (157)
T ss_dssp CEEEEEEETTEEEEEC
T ss_pred eEEEEEEECCEEEEEe
Confidence 9999999887777643
No 210
>3azc_A Cytochrome B6-F complex iron-sulfur subunit; rieske, thermosynechococcus elongatu photosynthesis, electron transport; 2.00A {Thermosynechococcus elongatus}
Probab=99.02 E-value=9.3e-14 Score=132.71 Aligned_cols=76 Identities=24% Similarity=0.468 Sum_probs=67.8
Q ss_pred CCCEEEEEeeCCe--EEEEeCCCCCCCcccCCceecCCEEEccCCCceEECCCCeeecCCCCCCCCeEEEEE-EcCeEEE
Q psy2951 494 STPKTLAQSTTSN--IYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTI-QNDDSVV 570 (1466)
Q Consensus 494 ~~~~~~~~~~~g~--~~a~~~~C~H~~~~l~~g~~~~~~~~Cp~H~~~f~~~~G~~~~~p~~~~l~~~~v~i-~~~~~~~ 570 (1466)
++..+++++.+|+ ++|++|+|||++++|++|. .++.++||||||+|+ .+|++..+|+..+|+.|++++ +++.+++
T Consensus 39 g~~~vlv~~~~G~~~v~A~~n~CpH~g~~L~~g~-~~~~i~CP~Hg~~Fd-~tG~~~~~P~~~~L~~ypv~v~~~g~V~V 116 (133)
T 3azc_A 39 GDPTYVIVTEDHQIANYGLNAVCTHLGCVVPWNV-SENKFICPCHGSQYD-STGKVVRGPAPLSLALVKATVTEDDKLVF 116 (133)
Confidence 4677888888898 9999999999999999887 667999999999999 789999999988999999998 7777766
Q ss_pred E
Q psy2951 571 V 571 (1466)
Q Consensus 571 ~ 571 (1466)
.
T Consensus 117 ~ 117 (133)
T 3azc_A 117 T 117 (133)
Confidence 4
No 211
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.34 E-value=6e-12 Score=137.82 Aligned_cols=157 Identities=18% Similarity=0.260 Sum_probs=112.2
Q ss_pred CcEEEECCChHHHHHHHHHhccCCeEEEEeecCcc----------------Ccccc-------CHHHHHHHHHHHHhc-C
Q psy2951 735 SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVP----------------FQESL-------GKEVGERITKLFESK-G 790 (1466)
Q Consensus 735 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~----------------~~~~~-------~~~~~~~~~~~l~~~-g 790 (1466)
-+|+|||+|++|+++|..|++.|.+|+++++.... +.+.+ ...+...+.+.+++. |
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~g 83 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRP 83 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCC
Confidence 47999999999999999999999999999986210 00111 135667788888887 9
Q ss_pred cEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccCcc--------------------c---cccCCceee
Q psy2951 791 VKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTN--------------------Y---LDGKGVELN 847 (1466)
Q Consensus 791 v~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~--------------------~---~~~~gl~~~ 847 (1466)
++++ +.+++++... ++++..+.+.+|+++++|.||+|+|...+.. + ++..+++++
T Consensus 84 v~i~-~~~v~~i~~~-~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~~ 161 (232)
T 2cul_A 84 LHLF-QATATGLLLE-GNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGFRFV 161 (232)
T ss_dssp EEEE-ECCEEEEEEE-TTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTCCEE
T ss_pred cEEE-EeEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCCeEE
Confidence 9999 5789999843 4455667888888999999999999944322 2 223344443
Q ss_pred CCCc---------------EEeCC------CC-CCCCCCeEEeccccccCCcccCCceeeeccHHHHHHHHHHHHHHhcc
Q psy2951 848 GQKA---------------VVVNE------YL-ETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVE 905 (1466)
Q Consensus 848 ~~G~---------------i~vd~------~~-~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~~A~~~g~~aA~~i~~ 905 (1466)
...+ ..... .+ .|++|+|||+|||+ ... .+..|..||+.+|.+|..
T Consensus 162 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g-----------~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 162 EREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REG-----------DYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp EEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCC-----------CHHHHHHHHHHHHHHHHH
T ss_pred ccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCc-----------cHHHHHHHHHHHHHHHHh
Confidence 2110 11110 12 27899999999999 432 456899999999999964
No 212
>2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida}
Probab=99.33 E-value=1.1e-12 Score=122.26 Aligned_cols=70 Identities=29% Similarity=0.525 Sum_probs=65.0
Q ss_pred hhhhhhhhcCCCCCCCccccceeecCCEEEcCCCCceeecCCCccccCCCCCCCCeEEEEEEcCCEEEEEc
Q psy2951 974 AERNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVVQA 1044 (1466)
Q Consensus 974 ~~g~~~a~~~~C~h~g~~l~~g~~~~~~~~cp~h~~~f~~~~g~~~~~p~~~~l~~~~v~~~~~~~~~~~~ 1044 (1466)
.+|+++|+.+.|||.+++|..|.+.++.+.||||||+|++++|++...|+..+|+.|++++ .++.++++.
T Consensus 33 ~~g~~~A~~~~CpH~g~~L~~g~~~~~~i~Cp~Hg~~Fd~~~G~~~~~P~~~~L~~~~v~~-~~g~v~v~~ 102 (103)
T 2qpz_A 33 VEGEIYATDNLCTHGSARMSDGYLEGREIECPLHQGRFDVCTGKALCAPVTQNIKTYPVKI-ENLRVMIDL 102 (103)
T ss_dssp ETTEEEEEESBCSSSSCBGGGSEEETTEEECTTTTCEEETTTCCEEETTCCSCCCEECEEE-ETTEEEEEC
T ss_pred ECCEEEEECCcCCCCCCCCCCCeEeCCEEECCCCCCEEeCCCCCEeCCCCCCCCCEEeEEE-ECCEEEEEc
Confidence 5789999999999999999999999999999999999999999999999988999999998 678888753
No 213
>2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae}
Probab=99.32 E-value=1.2e-12 Score=123.01 Aligned_cols=70 Identities=31% Similarity=0.613 Sum_probs=65.4
Q ss_pred hhhhhhhcCCCCCCCccccceeecCCEEEcCCCCceeecCCCccccCCCCCCCCeEEEEEEcCCEEEEEcc
Q psy2951 975 ERNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVVQAR 1045 (1466)
Q Consensus 975 ~g~~~a~~~~C~h~g~~l~~g~~~~~~~~cp~h~~~f~~~~g~~~~~p~~~~l~~~~v~~~~~~~~~~~~~ 1045 (1466)
+|+++|+.+.|||.+++|..|.+.++.+.||||||+|++++|++...|+..+|+.|++++ .++.+++...
T Consensus 35 ~g~~~A~~~~CpH~g~~L~~g~~~~~~i~Cp~Hg~~Fdl~tG~~~~~P~~~~L~~~~v~~-~~g~v~v~~~ 104 (108)
T 2i7f_A 35 DGEVFVTDNLCTHGNAMLTDGYQDGTIIECPFHGGSFDIATGAAKAFPCQIPIKTYPVTI-EDGWVCIDQP 104 (108)
T ss_dssp TTEEEEEESBCSSSSCBGGGSEEETTEEECSSTTCEEETTTCCBCSTTCCSCCCEECEEE-ETTEEEEECC
T ss_pred CCEEEEEeCcCCCCCCCCCCCEEeCCEEEcCCCCCEEeCCCcCEeCCCCCCCccEEeEEE-ECCEEEEeCC
Confidence 789999999999999999999999999999999999999999999999988999999998 6788888654
No 214
>2de6_D Ferredoxin component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Pseudomonas resinovorans} PDB: 2de5_D 1vck_A 2de7_D*
Probab=99.29 E-value=2.5e-12 Score=121.84 Aligned_cols=70 Identities=30% Similarity=0.578 Sum_probs=65.5
Q ss_pred hhhhhhhcCCCCCCCccccceeecCCEEEcCCCCceeecCCCccccCCCCCCCCeEEEEEEcCCEEEEEcc
Q psy2951 975 ERNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVVQAR 1045 (1466)
Q Consensus 975 ~g~~~a~~~~C~h~g~~l~~g~~~~~~~~cp~h~~~f~~~~g~~~~~p~~~~l~~~~v~~~~~~~~~~~~~ 1045 (1466)
+|+++|+.+.|||.+++|..|.+.++.+.||||||+|++++|+++..|+..+|+.|++++ .++.+++...
T Consensus 36 ~g~~~A~~n~CpH~g~~L~~g~~~~~~i~CP~Hg~~Fdl~tG~~~~~P~~~~L~~~~v~~-~~g~V~v~~~ 105 (115)
T 2de6_D 36 GDQFYATEDTCTHGIASLSEGTLDGDVIECPFHGGAFNVCTGMPASSPCTVPLGVFEVEV-KEGEVYVAGE 105 (115)
T ss_dssp TTEEEEEESBCTTSSCBGGGSEEETTEEECTTTCCEEETTTCCEEETTCCSCCCEEEEEE-SSSEEEEEEE
T ss_pred CCEEEEEeCCCCCCCCCCcCCEEeCCEEECCCCCCEEcCCCcCEeCCCCcCCCCEEEEEE-ECCEEEEecC
Confidence 789999999999999999999999999999999999999999999999988999999998 7888888643
No 215
>3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans}
Probab=99.27 E-value=2e-12 Score=123.64 Aligned_cols=71 Identities=25% Similarity=0.504 Sum_probs=65.5
Q ss_pred hhhhhhhhcCCCCCCCccccce--eecCCEEEcCCCCceeecCCCccccCCCCCCCCeEEEEEEcCCEEEEEcc
Q psy2951 974 AERNIYAVGTKCSHYGAPLVKG--SLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVVQAR 1045 (1466)
Q Consensus 974 ~~g~~~a~~~~C~h~g~~l~~g--~~~~~~~~cp~h~~~f~~~~g~~~~~p~~~~l~~~~v~~~~~~~~~~~~~ 1045 (1466)
.+|+++|+.+.|||.+++|..| .+.++.+.||||||+|++++|++...|+..+|+.|++++ .++.+++...
T Consensus 40 ~~g~~~A~~n~CpH~g~~L~~G~~~~~~~~i~CP~Hg~~Fdl~tG~~~~~P~~~~L~~~~v~v-~~g~V~v~~~ 112 (121)
T 3gce_A 40 DGDSVYAISNLCSHAEAYLDMGVFHAESLEIECPLHVGRFDVRTGAPTALPCVLPVRAYDVVV-DGTEILVAPK 112 (121)
T ss_dssp ETTEEEEEESBCSSSSCBGGGSEEETTTTEEECTTTCCEEETTTCCEEETTCCSCCCBCCEEE-ETTEEEECCC
T ss_pred ECCEEEEEeCcCCCCCCCCCCCceeecCCEEEcCCCCCEEcCCCccEeCCCCcCCcceEEEEE-ECCEEEEEEC
Confidence 3789999999999999999999 888999999999999999999999999999999999999 6788888643
No 216
>1fqt_A Rieske-type ferredoxin of biphenyl dioxygenase; 2Fe-2S cluster, beta sandwich, oxido; 1.60A {Burkholderia xenovorans} SCOP: b.33.1.1 PDB: 2e4q_A 2e4p_A 2yvj_B*
Probab=99.26 E-value=2.3e-12 Score=121.83 Aligned_cols=70 Identities=26% Similarity=0.516 Sum_probs=64.8
Q ss_pred hhhhhhhcCCCCCCCccccce-eecCCEEEcCCCCceeecCCCccccCCCCCCCCeEEEEEEcCCEEEEEcc
Q psy2951 975 ERNIYAVGTKCSHYGAPLVKG-SLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVVQAR 1045 (1466)
Q Consensus 975 ~g~~~a~~~~C~h~g~~l~~g-~~~~~~~~cp~h~~~f~~~~g~~~~~p~~~~l~~~~v~~~~~~~~~~~~~ 1045 (1466)
+|+++|+.+.|||.+++|..| .+.++.+.||||||+|+++||++...|+..+|+.|++++ .++.+++...
T Consensus 36 ~g~~~A~~n~CpH~g~~L~~g~~~~~~~i~CP~Hg~~Fd~~tG~~~~~P~~~~L~~~~v~~-~~g~v~v~~~ 106 (112)
T 1fqt_A 36 DGELFATQDRCTHGDWSLSDGGYLEGDVVECSLHMGKFCVRTGKVKSPPPCEALKIFPIRI-EDNDVLVDFE 106 (112)
T ss_dssp TTEEEEEESBCTTSSCBSSTTCCEETTEEECTTTCCEEETTTCCEEESSCCSCCCBCCEEE-ETTEEEECTT
T ss_pred CCEEEEEECCCCCCCcCCCCCCEEcCCEEECCCCCCEEeCCCCcEeCCCCCCCccEEEEEE-ECCEEEEEec
Confidence 789999999999999999998 888999999999999999999999999988999999998 6888888653
No 217
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.26 E-value=1.9e-12 Score=153.65 Aligned_cols=161 Identities=13% Similarity=0.194 Sum_probs=99.2
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCC-------CCCcc-------chhc-----------------
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY-------DRVKL-------SKQL----------------- 643 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~-------~~~~~-------~~~~----------------- 643 (1466)
.+||+|||||+||+++|+.|+++|.+ |+++|+.+.+.. ..+.+ ...+
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~--V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKS--VTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNW 81 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCC--EEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCC--EEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHH
Confidence 47999999999999999999999987 888888754321 01100 0000
Q ss_pred ---------cc--------------CcccccccCHhHhhhCCcEEEEceEEEEec-c----ccccEEEccCCCEEecCEE
Q psy2951 644 ---------DI--------------KADSILLRTEEFYKDNDIHVIKGKKIISDS-E----LNEKKIKLQDGTSIDFTKI 695 (1466)
Q Consensus 644 ---------~~--------------~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~-~----~~~~~v~~~~~~~~~~d~l 695 (1466)
+. ...++...+.+.+++.|++++++++|+.+. + .....+.+.++ ++.+|+|
T Consensus 82 ~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~V 160 (401)
T 2gqf_A 82 DFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNL 160 (401)
T ss_dssp HHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEE
T ss_pred HHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEE
Confidence 00 112222334455667799999999998883 2 22345666555 7999999
Q ss_pred EEcCCCCCCc--------------------CCCCCCCCcEEEecCHHHH-HhhcccCCCCCcEEEEC-------------
Q psy2951 696 YLATGSSPRT--------------------ISQADGVNKVFYLRTVEDA-NNIAPHITPESNVVVIG------------- 741 (1466)
Q Consensus 696 viAtG~~~~~--------------------~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~vvVvG------------- 741 (1466)
|+|||+.+.. |..| +... +.+.+.... ..+.. ...+.++.|+|
T Consensus 161 VlAtG~~s~p~~g~~G~g~~la~~~G~~i~~~~p-~l~~-~~~~~~~~~~~~l~g-~~~~~~~~i~G~~~~~g~~l~t~~ 237 (401)
T 2gqf_A 161 IVATGGLSMPGLGATPFGYQIAEQFGIPVIPPRA-SLVP-FTYRETDKFLTALSG-ISLPVTITALCGKSFYNQLLFTHR 237 (401)
T ss_dssp EECCCCSSCGGGTCCSHHHHHHHHTTCCEEEEEE-ESCC-EECCGGGGGGGGGTT-CEEEEEEEETTSCEEEEEEEECSS
T ss_pred EECCCCccCCCCCCChHHHHHHHHCCCCcccCcc-eeec-eecCCchhhcccCCC-eeeeeEEEEcCCceEEeCEEEECC
Confidence 9999987732 2233 3221 122121111 11211 11134565668
Q ss_pred --CChHHHHHHHHHhccCCeEEE
Q psy2951 742 --SSFIGMEAAAFCASKVKSVTV 762 (1466)
Q Consensus 742 --~G~~g~e~A~~l~~~g~~V~l 762 (1466)
+|+++++++..+++ +.+++|
T Consensus 238 g~sG~~~l~~s~~~~~-~~~~~i 259 (401)
T 2gqf_A 238 GISGPAVLQISNYWQP-TESVEI 259 (401)
T ss_dssp EEESHHHHHHTTTCCT-TCCEEE
T ss_pred CccHHHHHHHHHHHhc-CCEEEE
Confidence 89999999998876 667775
No 218
>1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A
Probab=99.26 E-value=3.5e-12 Score=120.47 Aligned_cols=73 Identities=27% Similarity=0.399 Sum_probs=65.8
Q ss_pred hhhhhhhhhhhcCCCCCCCccccceeecCCEEEcCCCCceeecCCCccccCCCCCCCCeEEEEEEcCCEEEEEcc
Q psy2951 971 AQFAERNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVVQAR 1045 (1466)
Q Consensus 971 ~~~~~g~~~a~~~~C~h~g~~l~~g~~~~~~~~cp~h~~~f~~~~g~~~~~p~~~~l~~~~v~~~~~~~~~~~~~ 1045 (1466)
++..+|+++|+.+.|||.+++|..|.+.++.+.||||||+|++.||++.. |+..+|+.|++++ .++.+++...
T Consensus 30 ~r~~~g~~~A~~~~CpH~g~~L~~g~~~~~~i~Cp~Hg~~Fd~~tG~~~~-p~~~~L~~~~v~~-~~g~v~v~~~ 102 (111)
T 1vm9_A 30 VNSEEHGVKAYQAMCPHQEILLSEGSYEGGVITCRAHLWTFNDGTGHGIN-PDDAALAEYPVEV-KGDDIYVSTK 102 (111)
T ss_dssp EEETTTEEEEEESBCSSSSCBGGGSEEETTEEECTTTCCEEETTTCBBSS-SSSCBCCEECEEE-ETTEEEECCT
T ss_pred EEeCCCeEEEEeCcCCCCCcCCCCceEcCCEEEcCCCCCEEeCCCccCCC-CCcCCcCEEEEEE-ECCEEEEecc
Confidence 34447899999999999999999999999999999999999999999998 8888999999998 6888888654
No 219
>4aiv_A Probable nitrite reductase [NAD(P)H] small subuni; oxidoreductase, nitrite metabolism; 2.00A {Mycobacterium tuberculosis}
Probab=99.24 E-value=2.9e-12 Score=121.25 Aligned_cols=75 Identities=20% Similarity=0.336 Sum_probs=62.9
Q ss_pred hhhhhhhhhhhhhcCCCCCCCccccceeecCC-----EEEcCCCCceeecCCCccccCCCCCCCCeEEEEEEcCCEEEEE
Q psy2951 969 LAAQFAERNIYAVGTKCSHYGAPLVKGSLGDG-----RVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVVQ 1043 (1466)
Q Consensus 969 ~~~~~~~g~~~a~~~~C~h~g~~l~~g~~~~~-----~~~cp~h~~~f~~~~g~~~~~p~~~~l~~~~v~~~~~~~~~~~ 1043 (1466)
.+++..+|++||+.+.|||.+++|..|.+.++ .+.||||+|+|+++||++.+.|.. +|++|+++++.+|.+++.
T Consensus 36 ~l~r~~dG~v~A~~n~CpH~ga~L~~~~~~~~~~~~~~i~CP~Hg~~Fdl~tG~~~~~p~~-~l~~ypv~ve~dG~V~V~ 114 (119)
T 4aiv_A 36 ALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRGGRAMVQSPILKQAFALDDGSCLDDPRV-SVPVYPARVTPEGRIQVA 114 (119)
T ss_dssp EEEECTTSCEEEEESBCTTTCCBCGGGSEEEEETTEEEEECTTTCCEEETTTCBBSSCTTC-BCCEECEEECTTSEEEEE
T ss_pred EEEEcCCCeEEEEECCCCCCCCccccCceeccccCCCEEECCCCCCEEeCCCCcCcCCCCC-ccceEEEEEEeCCEEEEe
Confidence 34455678999999999999999887655432 599999999999999999998874 789999998678899885
Q ss_pred c
Q psy2951 1044 A 1044 (1466)
Q Consensus 1044 ~ 1044 (1466)
.
T Consensus 115 ~ 115 (119)
T 4aiv_A 115 R 115 (119)
T ss_dssp E
T ss_pred c
Confidence 3
No 220
>2nwf_A Ubiquinol-cytochrome C reductase iron-sulfur SUBU; rieske [2Fe-2S] ISP, oxidoreductase; HET: GOL; 1.10A {Rhodobacter sphaeroides} PDB: 2nuk_A 2nve_A 2num_A 2nvg_A 2nvf_A
Probab=99.22 E-value=5.4e-12 Score=122.49 Aligned_cols=67 Identities=21% Similarity=0.323 Sum_probs=58.8
Q ss_pred eeCCeEEEEeCCCCCCCcccCC-ceecCCEEEccCCCceEECCCCeeecCCCCCCCCeEEEEE-EcCeEE
Q psy2951 502 STTSNIYAVGTKCSHYGAPLVK-GSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTI-QNDDSV 569 (1466)
Q Consensus 502 ~~~g~~~a~~~~C~H~~~~l~~-g~~~~~~~~Cp~H~~~f~~~~G~~~~~p~~~~l~~~~v~i-~~~~~~ 569 (1466)
+.+|+++|++|.|||+||+|.+ +..+++.|.||||||+|++ +|++..+|+..+|..+++++ +++.++
T Consensus 71 ~~~g~~~a~~~~C~H~G~~l~~~~~~~~~~~~CP~Hgs~Fd~-~G~~~~gPa~~~L~~~pv~v~~d~~i~ 139 (141)
T 2nwf_A 71 DEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGSHWDS-AGRIRKGPAPENLPIPLAKFIDETTIQ 139 (141)
T ss_dssp STTSCEEEEECCCTTTCCCCEEEEETTTTEEEETTTTEEECT-TSCEEESSCCSCCCBCSEEESSSSEEE
T ss_pred cCCCcEEEEeCcCCCCCeEccccCccCCCEEEcCCCCCEECC-CCCCccCCCCCCCCceeEEEEECCEEE
Confidence 3489999999999999999998 6666679999999999999 79999999989999999998 455554
No 221
>1nyk_A Rieske iron-sulfur protein; beta barrel, iron sulfur cluster, electron transport; 1.31A {Thermus thermophilus} SCOP: b.33.1.1 PDB: 3fou_A
Probab=99.22 E-value=1.1e-11 Score=124.01 Aligned_cols=67 Identities=19% Similarity=0.413 Sum_probs=60.2
Q ss_pred CeEEEEeCCCCCCCcccCCceecCCEEEccCCCceEECCCCe-eecCCCCCCCCeEEEEEEcCeEEEE
Q psy2951 505 SNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGD-IEDFPGMDSLPCYKVTIQNDDSVVV 571 (1466)
Q Consensus 505 g~~~a~~~~C~H~~~~l~~g~~~~~~~~Cp~H~~~f~~~~G~-~~~~p~~~~l~~~~v~i~~~~~~~~ 571 (1466)
+.++|+++.|||+||+|+.+..+++.|.||||||+|+++||. |..+|+..+|..|+++++++.+|+.
T Consensus 78 ~gv~A~~~~CpH~G~~L~~g~~~~~~i~CP~Hgs~Fd~~tG~~~~~gPa~~~L~~~~v~v~~g~V~v~ 145 (165)
T 1nyk_A 78 EGVVAYSAVCTHLGCIVSQWVADEEAALCPCHGGVYDLRHGAQVIAGPPPRPVPQLPVRVEDGVLVAA 145 (165)
T ss_dssp TTEEEEECBCTTTCCBCCEEEGGGTEEECTTTCCEEEGGGTTEEEESSCSSCCCEECEEEETTEEEEC
T ss_pred CCEEEEEeecCCCCeEcccccCCCCEEECCCCCCEEcCCCCCeeecCCCCCCCcEEEEEEECCEEEEE
Confidence 339999999999999999888888899999999999999885 9999999999999999987777653
No 222
>3c0d_A Putative nitrite reductase NADPH (small subunit) oxidoreductase protein; NESG, VPR162, Q87HB1, XRAY, structure; 2.40A {Vibrio parahaemolyticus rimd 2210633} SCOP: b.33.1.3
Probab=99.21 E-value=5.2e-12 Score=120.49 Aligned_cols=73 Identities=23% Similarity=0.328 Sum_probs=64.3
Q ss_pred hhhhhhhhhhhcCCCCCCCc-cccceeecCC----EEEcCCCCceeecCCCccccCCCCCCCCeEEEEEEcCCEEEEEcc
Q psy2951 971 AQFAERNIYAVGTKCSHYGA-PLVKGSLGDG----RVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVVQAR 1045 (1466)
Q Consensus 971 ~~~~~g~~~a~~~~C~h~g~-~l~~g~~~~~----~~~cp~h~~~f~~~~g~~~~~p~~~~l~~~~v~~~~~~~~~~~~~ 1045 (1466)
++..+|+++|+.+.|||.++ +|..|.+.++ .+.||||||+|++++|++...|+ .+|++|++++ +++.+++...
T Consensus 33 ~r~~~G~~~A~~n~CpH~g~~~L~~G~~~~~~g~~~i~CP~Hg~~Fdl~tG~~~~~P~-~~l~~~~v~v-~~g~V~v~~~ 110 (119)
T 3c0d_A 33 FYIPDSGVYAVQDWDPIGKAYVMSRGIVGDINGEMCVASPLYKQHFSLKSGQCLEDEA-HCLKTWRVTV-DDNQVCYLAK 110 (119)
T ss_dssp EEETTTEEEEEESEETTTTEECGGGSEEEESSSSEEEECTTTCCEEETTTCBBSSCTT-CBCCEECEEE-SSSEEEEECC
T ss_pred EEecCCeEEEEeCCCCCCCCccCCCeEEcCCCCCeEEECCCCCCEEECCCCcCCCCCC-ceeeEEEEEE-ECCEEEEEeC
Confidence 34457899999999999999 7999998753 89999999999999999999888 7899999999 7889988654
No 223
>1pp9_E Ubiquinol-cytochrome C reductase iron-sulfur SUBU mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: b.33.1.1 f.23.12.1 PDB: 1bgy_E* 1be3_E* 1l0n_E* 1ntk_E* 1ntm_E* 1ntz_E* 1nu1_E* 1l0l_E* 1ppj_E* 1qcr_E* 1sqb_E* 1sqp_E* 1sqq_E* 1sqv_E* 1sqx_E* 2a06_E* 2fyu_E* 2ybb_E* 1bcc_E* 2bcc_E* ...
Probab=99.20 E-value=9.8e-12 Score=127.79 Aligned_cols=65 Identities=20% Similarity=0.338 Sum_probs=58.5
Q ss_pred CCeEEEEeCCCCCCCcccCCceecCCEEEccCCCceEECCCCeeecCCCCCCCCeEEEEEE-cCeEE
Q psy2951 504 TSNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQ-NDDSV 569 (1466)
Q Consensus 504 ~g~~~a~~~~C~H~~~~l~~g~~~~~~~~Cp~H~~~f~~~~G~~~~~p~~~~l~~~~v~i~-~~~~~ 569 (1466)
+|+++|+++.|||+||+|.++..+++.|.||||||+|++ +|++..+|+..+|..+++++. ++.++
T Consensus 129 ~ge~~a~~~~CtH~G~~l~~~~~~~~~~~CP~HGs~FD~-~G~v~~gPa~~~L~~~p~~v~~d~~I~ 194 (196)
T 1pp9_E 129 KPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDA-SGRIRKGPAPLNLEVPSYEFTSDDMVI 194 (196)
T ss_dssp STTEEEEECCCTTTSCCCEETCSTTSSEEETTTTEEECT-TCCEEESSCCSCCCCCCEEEETTTEEE
T ss_pred CCeEEEEECccCCCCeeccccCCCCCEEEeCCCCCEECC-CCCCccCCCCCCCcceeEEEEECCEEE
Confidence 899999999999999999988877789999999999999 899999999999999999984 44443
No 224
>2jo6_A Nitrite reductase [NAD(P)H] small subunit; all beta, ISP domain, rieske iron-sulfur protein, 3-layer sandwich, structural genomics, PSI-2; NMR {Escherichia coli} SCOP: b.33.1.3
Probab=99.18 E-value=1.4e-11 Score=116.68 Aligned_cols=72 Identities=15% Similarity=0.246 Sum_probs=62.4
Q ss_pred hhhhhh-hhhhhcCCCCCCCc-cccceeec---CC-EEEcCCCCceeecCCCccccCCCCCCCCeEEEEEEcCCEEEEEc
Q psy2951 971 AQFAER-NIYAVGTKCSHYGA-PLVKGSLG---DG-RVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVVQA 1044 (1466)
Q Consensus 971 ~~~~~g-~~~a~~~~C~h~g~-~l~~g~~~---~~-~~~cp~h~~~f~~~~g~~~~~p~~~~l~~~~v~~~~~~~~~~~~ 1044 (1466)
++..+| +++|+.+.|||.++ +|..|.+. +. .+.||||||+|+++||++...|+ .+|+.|++++ .++.+++..
T Consensus 34 ~r~~~g~~~~A~~n~CpH~g~~~L~~G~~~~~~g~~~i~CP~Hg~~Fd~~tG~~~~~P~-~~l~~~~v~v-~~g~V~v~~ 111 (113)
T 2jo6_A 34 FRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQ-FSVKHYEARV-KDGVVQLRG 111 (113)
T ss_dssp EECSSSSCCEEEESSCSSSCCSCSTTSEEEEETTEEEEEETTTTEEEETTTTEETTTTT-TCCCEEEEEE-ETTEEEEEC
T ss_pred EEECCCCEEEEEeCcCCCCCCcccCCeEEeccCCCcEEECCCCCCEEeCCCccCCCCCc-ccccEEeEEE-ECCEEEEEc
Confidence 344478 69999999999999 79999886 23 89999999999999999999887 7899999998 688888864
No 225
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.18 E-value=1.7e-13 Score=159.26 Aligned_cols=250 Identities=14% Similarity=0.056 Sum_probs=144.2
Q ss_pred CCCcEEEECCchHHHHHHHHHHh--cCCCCcEEEEcCCCCCCCCCCCCchhhccCcccccccChhhhccCCcEEEcCCeE
Q psy2951 1065 NKDTFIVVGGGPSGATCVETLRQ--NGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKI 1142 (1466)
Q Consensus 1065 ~~~~vvIVG~G~aGl~aA~~L~~--~g~~~~i~li~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v 1142 (1466)
...+|+||||||||++||..|++ .|+ +|+|||+++.++..... .... .+...+......++++.++++..+..
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~--~V~viEk~~~~GG~~~~-~~~~-~~~~~l~~~~~~~~~e~Gv~~~~~~~- 138 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDL--KVCIIESSVAPGGGSWL-GGQL-FSAMVMRKPAHLFLQELEIPYEDEGD- 138 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTS--CEEEECSSSSCCTTTTC-CSTT-CCCEEEETTTHHHHHHTTCCCEECSS-
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCC--eEEEEECCCCCCceEEe-CCcc-CCHHHHHHHHHHHHHHcCCEEEECCc-
Confidence 34689999999999999999975 477 99999998876543211 1111 11111212223445566766554431
Q ss_pred EEeecCCCCeEEecCCcEEecCeEEEecCCCCCcCCCCCCCC-----cEEEecCHHHHHhhhcccCCCCeEEEEcCCHHH
Q psy2951 1143 ISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN-----KVFYLRTVEDANNIAPHITPESNVVVIGSSFIG 1217 (1466)
Q Consensus 1143 ~~i~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~~-----~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g~~g 1217 (1466)
.....+.++++++..++.+.++ |.+ ++..+.. .......+++++++|+|.++
T Consensus 139 ----------------~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~------~~~~~~~~~~v~viggg~~a 195 (326)
T 3fpz_A 139 ----------------YVVVKHAALFISTVLSKVLQLP-NVKLFNATCVEDLVT------RPPTEKGEVTVAGVVTNWTL 195 (326)
T ss_dssp ----------------EEEESCHHHHHHHHHHHHHTST-TEEEETTEEEEEEEE------ESSCSSSSCEEEEEEEEEHH
T ss_pred ----------------ceecceeEEEEcchhhhccccc-cceeecccccceeec------cCCcccCCCEEEEEccCcee
Confidence 1223344556677777777777 654 1222110 11223458899999999999
Q ss_pred HHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEE
Q psy2951 1218 MEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLV 1297 (1466)
Q Consensus 1218 ~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~v 1297 (1466)
++.|..+...+.++++..+......... .... ...+.... +.++.. ........+.+|.+
T Consensus 196 v~~a~~~~~~~~~v~i~~~~~~~~~~~~-----------~~~~------~~~~~~~~-g~~~~~--~~~~~~~~~~~~~~ 255 (326)
T 3fpz_A 196 VTQAHGTQCAMDPNVIELAGYKNDGTRD-----------LSQK------HGVILSTT-GHDGPF--GAFCAKRIVDIDQN 255 (326)
T ss_dssp HHTCTTSSSCCCCEEEEESCBCTTSSBC-----------TTSC------CCEEEECC-CSCSSS--CSHHHHHHHHHCTT
T ss_pred eehhhhhhhccCcEEEEeeccccccccc-----------ceee------cceEEEEe-cceeeE--eecceeEEEecCce
Confidence 9999999999999999877643221000 0000 01111111 111110 00000123456666
Q ss_pred EEeeccccCccccccCCceeeCCCeEEeCCCccccCCCEEEecccccCCCccCCCceeeee-cHHHHHHHHHHHHHHhc
Q psy2951 1298 IVGIGTVLNTNYLDGKGVELNGQKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIG-HYQLAQYHGRIAALNMV 1375 (1466)
Q Consensus 1298 v~a~G~~p~~~~~~~~gl~~~~~G~i~vd~~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~-~~~~A~~qa~~aa~~i~ 1375 (1466)
..+.|..|.. +... .+.+++|..++|+.|+|||+||++..-.... |.. .+..++.+|+.||+.|+
T Consensus 256 ~~~~g~~~~~-------~~~~-e~~iv~~~~~~t~vpGv~aaGDaa~~v~g~~-----rmGp~~g~mi~SG~~AAe~I~ 321 (326)
T 3fpz_A 256 QKLGGMKGLD-------MNHA-EHDVVIHSGAYAGVDNMYFAGMEVAELDGLN-----RMGPTFGAMALSGVHAAEQIL 321 (326)
T ss_dssp CCCCCCCCBC-------HHHH-HHHHHHHCEECTTSBTEEECTHHHHHHHTCC-----BCCSCCHHHHHHHHHHHHHHH
T ss_pred eeecceeccc-------cccc-CCeEEECCCeEECCCCEEEEchHhccccCCC-----cCchHHHHHHHHHHHHHHHHH
Confidence 6666655532 2222 2457778889999999999999886422110 111 23567788999999886
No 226
>1jm1_A Rieske iron-sulfur protein SOXF; electron transport, respiratory chain, oxidoreductase; 1.11A {Sulfolobus acidocaldarius} SCOP: b.33.1.1
Probab=99.16 E-value=4.3e-11 Score=123.87 Aligned_cols=71 Identities=23% Similarity=0.461 Sum_probs=62.0
Q ss_pred eCCeEEEEeCCCCCCCcccCCcee-----------cCCEEEccCCCceEECCCC-eeecCCCCCCCCeEEEEEE--cCeE
Q psy2951 503 TTSNIYAVGTKCSHYGAPLVKGSL-----------GDGRVRCPWHGACFNIATG-DIEDFPGMDSLPCYKVTIQ--NDDS 568 (1466)
Q Consensus 503 ~~g~~~a~~~~C~H~~~~l~~g~~-----------~~~~~~Cp~H~~~f~~~~G-~~~~~p~~~~l~~~~v~i~--~~~~ 568 (1466)
.+|+++|+++.|||+||+|++|.+ .++.+.||||||+||++|| ++..+|+..+|+.|+++++ ++.+
T Consensus 83 ~~g~i~A~~n~CpH~G~~L~~g~~~p~~~~~~~~~~~~~i~CP~Hgs~FDl~tGG~v~~gPa~~~L~~~~v~v~~~~g~v 162 (204)
T 1jm1_A 83 PNGTIFAFSDVCVHLGCQLPAQVIVSSESDPGLYAKGADLHCPCHGSIYALKDGGVVVSGPAPRPLPIVILDYDSSTGDI 162 (204)
T ss_dssp TTTCEEEEESBCTTTCCBCCTTEEESSTTSSEEETTTTEEECTTTCCEEEGGGTSEEEESSCCSCCCBEEEEECTTTCEE
T ss_pred cCCEEEEEeCcCCCCCcCccccccccccccccccCCCCEEECCCCCCEEeCCCCCeEecCCCCCCCCeEeeEEEecCCEE
Confidence 378999999999999999999864 4679999999999999986 9999999889999999987 5677
Q ss_pred EEEEc
Q psy2951 569 VVVQA 573 (1466)
Q Consensus 569 ~~~~~ 573 (1466)
|+...
T Consensus 163 ~v~g~ 167 (204)
T 1jm1_A 163 YAVGT 167 (204)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 76543
No 227
>3gcf_A Terminal oxygenase component of carbazole 1,9A- dioxygenase; rieske oxygenase, 2Fe-2S, electron transfer, oxidoreductase; 2.30A {Nocardioides aromaticivorans}
Probab=99.16 E-value=4.8e-11 Score=135.04 Aligned_cols=81 Identities=21% Similarity=0.414 Sum_probs=67.5
Q ss_pred CCCCEEEEEeeCCeEEEEeCCCCCCCcccCCce--ecCCEEEccCCCceEECCCCeeecCCC--------CCCCCeEEEE
Q psy2951 493 SSTPKTLAQSTTSNIYAVGTKCSHYGAPLVKGS--LGDGRVRCPWHGACFNIATGDIEDFPG--------MDSLPCYKVT 562 (1466)
Q Consensus 493 ~~~~~~~~~~~~g~~~a~~~~C~H~~~~l~~g~--~~~~~~~Cp~H~~~f~~~~G~~~~~p~--------~~~l~~~~v~ 562 (1466)
.+.. ++++|.+|+++|++|+|||+|++|+.|. ..++.|+||||||+|++++|+|...|+ ..+|+.|+++
T Consensus 55 ~G~~-VvV~R~dG~v~A~~N~CpHRGa~Ls~G~~~~~~~~I~CPyHGW~Fdl~dG~cv~iP~~p~~~~~~~~~L~~ypV~ 133 (394)
T 3gcf_A 55 LGEK-VLLTRAKGEVKAIADGCAHRGVPFSKEPLCFKAGTVSCWYHGWTYDLDDGRLVDVLTSPGSPVIGKIGIKVYPVQ 133 (394)
T ss_dssp TTEE-EEEEEETTEEEEEESSCTTTCCCGGGSCBCSSTTEEECTTTCEEEETTTCBEEEETTSTTCTTTTSCBCCEECEE
T ss_pred CCEE-EEEEEeCCeEEEeeCcCCCCCCCCcCCcccCcCCEEECCCCCcEEECCCCceeccCCCcccccccccCceEEEEE
Confidence 3344 4455589999999999999999999987 357799999999999999999998765 3468999999
Q ss_pred EEcCeEEEEEcc
Q psy2951 563 IQNDDSVVVQAR 574 (1466)
Q Consensus 563 i~~~~~~~~~~~ 574 (1466)
+.+|.+|+....
T Consensus 134 e~~G~VfV~lgd 145 (394)
T 3gcf_A 134 VAQGVVFVFIGD 145 (394)
T ss_dssp EETTEEEEEESS
T ss_pred EECCcEEEecCC
Confidence 988888877643
No 228
>3gkq_A Terminal oxygenase component of carbazole 1,9A- dioxygenase; rieske nonheme iron oxygenase, electron transfer, putidaredoxin-type ferredoxin; 2.10A {Sphingomonas}
Probab=99.15 E-value=4.8e-11 Score=134.52 Aligned_cols=79 Identities=19% Similarity=0.346 Sum_probs=66.4
Q ss_pred CEEEEEeeCCeEEEEeCCCCCCCcccCCce--ecCCEEEccCCCceEECCCCeeecCCC--------CCCCCeEEEEEEc
Q psy2951 496 PKTLAQSTTSNIYAVGTKCSHYGAPLVKGS--LGDGRVRCPWHGACFNIATGDIEDFPG--------MDSLPCYKVTIQN 565 (1466)
Q Consensus 496 ~~~~~~~~~g~~~a~~~~C~H~~~~l~~g~--~~~~~~~Cp~H~~~f~~~~G~~~~~p~--------~~~l~~~~v~i~~ 565 (1466)
..++++|.+|+++|++|+|||+|++|+.|. ..++.|+||||||+|++++|+|...|+ ..+|+.|++++.+
T Consensus 54 ~~VvV~R~dG~v~A~~N~CpHRGa~Ls~G~~~~~~~~I~CPyHGW~Fdl~dG~cv~iP~~P~~~~~~~~~L~~ypV~e~~ 133 (389)
T 3gkq_A 54 EKVLLNRVDGVVHAIADRCLHRGVTLSDKVECYSKATISCWYHGWTYRWDNGKLVDILTNPTSVQIGRHALKTYPVREEK 133 (389)
T ss_dssp EEEEEEEETTEEEEEESSCTTTCCCGGGGCCCSBTTEEECTTTCEEEETTTCBEEEETTCTTCTTTTSCBCCBCCEEEET
T ss_pred EEEEEEEeCCeEEEeCCcCCCCCCCccCCcccCcCCEEECCCCCCEEECCCCCeecccCCcccccccccCCcEEEEEEEC
Confidence 344455589999999999999999999987 457799999999999999999998665 3468899999988
Q ss_pred CeEEEEEcc
Q psy2951 566 DDSVVVQAR 574 (1466)
Q Consensus 566 ~~~~~~~~~ 574 (1466)
|.+|+....
T Consensus 134 G~VfV~lgd 142 (389)
T 3gkq_A 134 GLVFLFVGD 142 (389)
T ss_dssp TEEEEEESS
T ss_pred CeEEEecCC
Confidence 888877643
No 229
>3gke_A DDMC; rieske cluster, non-heme mononuclear iron, oxygenase, oxidoreductase; 1.75A {Stenotrophomonas maltophilia} PDB: 3gb4_A 3gl0_A* 3gl2_A* 3gob_A* 3gte_A 3gts_A*
Probab=99.15 E-value=3.1e-11 Score=139.19 Aligned_cols=81 Identities=25% Similarity=0.373 Sum_probs=68.8
Q ss_pred CCCCEEEEEeeCCeEEEEeCCCCCCCcccCCceecCCEEEccCCCceEECCCCeeecCCC-------CCCCCeEEEEEEc
Q psy2951 493 SSTPKTLAQSTTSNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPG-------MDSLPCYKVTIQN 565 (1466)
Q Consensus 493 ~~~~~~~~~~~~g~~~a~~~~C~H~~~~l~~g~~~~~~~~Cp~H~~~f~~~~G~~~~~p~-------~~~l~~~~v~i~~ 565 (1466)
.+..++++++.+|+++|++|.|||+|++|+.|.++++.|+||||||+|+. +|+|...|+ ..+|+.|++++.+
T Consensus 28 ~g~~vvv~R~~~G~v~a~~n~CpHrg~~L~~G~~~~~~i~CpyHgw~fd~-~G~~~~~P~~~~~~~~~~~l~~~~v~~~~ 106 (349)
T 3gke_A 28 LDTPLALYRQPDGVVAALLDICPHRFAPLSDGILVNGHLQCPYHGLEFDG-GGQCVHNPHGNGARPASLNVRSFPVVERD 106 (349)
T ss_dssp TTEEEEEEECTTSCEEEEESSCTTTCCCGGGCEEETTEEECTTTCCEECT-TCCEEECCSTTCCCCGGGCCCBCCEEEET
T ss_pred CCEEEEEEEcCCCcEEEEeCcCCCCCcCCccCCccceEEEECCCCCEEcC-CCCccccCccccccccccccceeeEEEEC
Confidence 34555555557999999999999999999999999999999999999999 899999984 3478899999988
Q ss_pred CeEEEEEcc
Q psy2951 566 DDSVVVQAR 574 (1466)
Q Consensus 566 ~~~~~~~~~ 574 (1466)
|.+|+....
T Consensus 107 G~V~v~~~~ 115 (349)
T 3gke_A 107 ALIWIWPGD 115 (349)
T ss_dssp TEEEECCSC
T ss_pred CEEEEeeCC
Confidence 877775543
No 230
>2qjy_C Ubiquinol-cytochrome C reductase iron-sulfur SUBU; cytochrome B, 8 TM helixces cytochrome C1, 1 C-TERM TM helix 1 N-TERM TM helix; HET: BGL HEM SMA LOP UQ2; 2.40A {Rhodobacter sphaeroides} PDB: 2fyn_C* 2qjk_C* 2qjp_C* 1zrt_E* 2yiu_C*
Probab=99.15 E-value=4.4e-11 Score=122.74 Aligned_cols=64 Identities=23% Similarity=0.438 Sum_probs=55.7
Q ss_pred CCeEEEEeCCCCCCCcccCCc-eecCCEEEccCCCceEECCCCeeecCCCCCCCCeEEEEEEcCeE
Q psy2951 504 TSNIYAVGTKCSHYGAPLVKG-SLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDS 568 (1466)
Q Consensus 504 ~g~~~a~~~~C~H~~~~l~~g-~~~~~~~~Cp~H~~~f~~~~G~~~~~p~~~~l~~~~v~i~~~~~ 568 (1466)
+|+++|+++.|||+||+|.++ ..+.+.|.||||||+|++ +|++..+|+..+|..|++++++++.
T Consensus 119 ~g~~~a~~~~C~H~G~~l~~~~~g~~~~~~CP~Hg~~Fd~-~G~~~~gPa~~~L~~~~~~v~~d~~ 183 (187)
T 2qjy_C 119 AGEWLVMWGVCTHLGCSPIGGVSGDFGGWFCPCHGSHYDS-AGRIRKGPAPENLPIPLAKFIDETT 183 (187)
T ss_dssp TCCEEEEECCCTTTSCCCEEEEETTTTEEEETTTTEEECT-TSCEEESSCCSCCCBCSEEEEETTE
T ss_pred CCeEEEEeCccCCCCeECccCcCCCcCEEEeCCCCCEECC-CCeEeCCCCCCCCceEEEEEEeCCE
Confidence 789999999999999999874 333379999999999999 6999999999999999999875433
No 231
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.13 E-value=2.8e-11 Score=143.68 Aligned_cols=160 Identities=13% Similarity=0.188 Sum_probs=96.3
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCC-------CCC------CC-chhhcc---------------
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY-------DRV------KL-SKQLDI--------------- 1116 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~-------~~~------~l-~~~~~~--------------- 1116 (1466)
..+|+|||||++|+++|..|++.|. +|+|||+.+.+.. .+. .. .+.+..
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~--~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGK--SVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNW 81 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTC--CEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCC--CEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHH
Confidence 3689999999999999999999998 9999999875320 000 00 000000
Q ss_pred -----------C--------------cccccccChhhhccCCcEEEcCCeEEEeecCC----CC--eEEecCCcEEecCe
Q psy2951 1117 -----------K--------------ADSILLRTEEFYKDNDIHVIKGKKIISDSELN----EK--KIKLQDGTSIDFTK 1165 (1466)
Q Consensus 1117 -----------~--------------~~~~~~~~~~~~~~~~v~~~~~~~v~~i~d~~----~~--~v~~~~g~~~~yd~ 1165 (1466)
. ...+.....+.+++.|++++.+++|+++ ..+ .. .|.+.++ ++.+|+
T Consensus 82 ~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i-~~~~~g~~~~~~v~~~~g-~i~ad~ 159 (401)
T 2gqf_A 82 DFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQV-ERIQNDEKVRFVLQVNST-QWQCKN 159 (401)
T ss_dssp HHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEE-EECCSCSSCCEEEEETTE-EEEESE
T ss_pred HHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEE-EcccCcCCCeEEEEECCC-EEECCE
Confidence 0 0000000112344568999999999998 643 22 4566565 799999
Q ss_pred EEEecCCCCCc--------------------CCCCCCCCcEEEecCHHHH-HhhhcccCCCCeEEEEc------------
Q psy2951 1166 IYLATGSSPRT--------------------ISQADGVNKVFYLRTVEDA-NNIAPHITPESNVVVIG------------ 1212 (1466)
Q Consensus 1166 lvlAtG~~~~~--------------------~~~~~g~~~v~~~~~~~~~-~~l~~~~~~~~~vvVvG------------ 1212 (1466)
||+|||+.+.+ +..| ++.. +.+.+.+.. ..+. ...-..++.|+|
T Consensus 160 VVlAtG~~s~p~~g~~G~g~~la~~~G~~i~~~~p-~l~~-~~~~~~~~~~~~l~-g~~~~~~~~i~G~~~~~g~~l~t~ 236 (401)
T 2gqf_A 160 LIVATGGLSMPGLGATPFGYQIAEQFGIPVIPPRA-SLVP-FTYRETDKFLTALS-GISLPVTITALCGKSFYNQLLFTH 236 (401)
T ss_dssp EEECCCCSSCGGGTCCSHHHHHHHHTTCCEEEEEE-ESCC-EECCGGGGGGGGGT-TCEEEEEEEETTSCEEEEEEEECS
T ss_pred EEECCCCccCCCCCCChHHHHHHHHCCCCcccCcc-eeec-eecCCchhhcccCC-CeeeeeEEEEcCCceEEeCEEEEC
Confidence 99999997742 1122 2211 122111111 1121 111124555558
Q ss_pred ---CCHHHHHHHHHHhcCCCeEEE
Q psy2951 1213 ---SSFIGMEAAAFCASKVKSVTV 1233 (1466)
Q Consensus 1213 ---~g~~g~e~a~~l~~~g~~v~v 1233 (1466)
+|+++++++..+++ |.++++
T Consensus 237 ~g~sG~~~l~~s~~~~~-~~~~~i 259 (401)
T 2gqf_A 237 RGISGPAVLQISNYWQP-TESVEI 259 (401)
T ss_dssp SEEESHHHHHHTTTCCT-TCCEEE
T ss_pred CCccHHHHHHHHHHHhc-CCEEEE
Confidence 89999999999876 677775
No 232
>1vf5_D Rieske iron-sulfur protein; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: b.33.1.1 f.23.12.1 PDB: 2d2c_D* 2e74_D* 2e75_D* 2e76_D* 2zt9_D*
Probab=99.13 E-value=4.5e-12 Score=129.97 Aligned_cols=76 Identities=25% Similarity=0.531 Sum_probs=65.6
Q ss_pred CCCCEEEEEeeCCeE--EEEeCCCCCCCcccCCceecCCEEEccCCCceEECCCCeeecCCCCCCCCeEEEEEEcCeEEE
Q psy2951 493 SSTPKTLAQSTTSNI--YAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVV 570 (1466)
Q Consensus 493 ~~~~~~~~~~~~g~~--~a~~~~C~H~~~~l~~g~~~~~~~~Cp~H~~~f~~~~G~~~~~p~~~~l~~~~v~i~~~~~~~ 570 (1466)
.++..+++++.+|++ ||+++.|||+||+|.++. +++.|.||||||+|+. +|++..+|+..+|..|+++++++.+++
T Consensus 85 ~g~~~~lv~~~~g~~~~~a~~~~CtH~G~~l~~~~-~~~~~~CP~Hgs~Fd~-~G~~~~gPa~~~L~~~~v~v~~g~v~v 162 (179)
T 1vf5_D 85 KGDPTYIVVESKEAIRDYGINAVCTHLGCVVPWNA-AENKFKCPCHGSQYDE-TGRVIRGPAPLSLALCHATVQDDNIVL 162 (179)
T ss_dssp SSSCEECCBCTTCCBCSCCCBCBCTTTSCBCCBCS-SSSSEECTTTCCEECS-SSCCCSSSCCSCCBCCCCCCSSSSCCC
T ss_pred CCCeEEEEEECCCcEEEEEEeCccCCCCCCCcccC-CCCEEECCCCCCEECC-CCcEecCCCCCCCCeEEEEEECCEEEE
Confidence 446677778888987 999999999999999887 4569999999999998 899999999999999999986666554
No 233
>4aay_B AROB; oxidoreductase, rieske, iron sulfur, molybdopterin; HET: MGD; 2.70A {Rhizobium species}
Probab=99.12 E-value=7.9e-11 Score=118.65 Aligned_cols=81 Identities=21% Similarity=0.356 Sum_probs=68.7
Q ss_pred EeecCchhhhhhhhhhhhhhcCCCCCCCccccceeecCCEEEcCCCCceeecC-CCccccCCCCCCCCeEEEEEEcCCEE
Q psy2951 962 LTVGMDPLAAQFAERNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIA-TGDIEDFPGMDSLPCYKVTIQNDDSV 1040 (1466)
Q Consensus 962 ~~~g~~~~~~~~~~g~~~a~~~~C~h~g~~l~~g~~~~~~~~cp~h~~~f~~~-~g~~~~~p~~~~l~~~~v~~~~~~~~ 1040 (1466)
...+......+..+|+++|+.+.|||.+++|..| ..++.+.||||||+|++. +|+++..|+..+|+.|++++++++.+
T Consensus 80 ~R~g~~~~~~r~~~G~v~A~~n~CpH~G~~L~~g-~~~~~i~CP~Hg~~Fd~~~tG~~~~gPa~~~L~~y~v~vd~dG~V 158 (175)
T 4aay_B 80 LKLGTRVEGGVGPDGDIVGFSTICPHKGFPLSYS-ADNKTFNCPGHFSVFDPEKGGQQVWGQATQNLPQYVLRVADNGDI 158 (175)
T ss_dssp EECSSCCTTCBTTTTCEEEEECBCTTTCCBCEEE-TTTTEEECTTTCCEEEGGGTTEEEECSCSSCCCBEEEEECTTSEE
T ss_pred EEcccccccccCCCCEEEEEeCCCCCCCCCCccC-CCCCEEEcCCCCCEECCCCCceEecCCCCCCcCEEEEEEEcCCEE
Confidence 3344444445556889999999999999999998 678999999999999998 99999999999999999999667777
Q ss_pred EEE
Q psy2951 1041 VVQ 1043 (1466)
Q Consensus 1041 ~~~ 1043 (1466)
+..
T Consensus 159 ~av 161 (175)
T 4aay_B 159 FAE 161 (175)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 234
>3cx5_E Cytochrome B-C1 complex subunit rieske, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: b.33.1.1 f.23.12.1 PDB: 1kb9_E* 1kyo_E* 1p84_E* 2ibz_E* 1ezv_E* 3cxh_E*
Probab=99.10 E-value=8.1e-11 Score=120.34 Aligned_cols=66 Identities=23% Similarity=0.357 Sum_probs=55.0
Q ss_pred CCeEEEEeCCCCCCCcccCCceecCCEEEccCCCceEECCCCeeecCCCCCCCCeEEEEEEcCeEEE
Q psy2951 504 TSNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVV 570 (1466)
Q Consensus 504 ~g~~~a~~~~C~H~~~~l~~g~~~~~~~~Cp~H~~~f~~~~G~~~~~p~~~~l~~~~v~i~~~~~~~ 570 (1466)
+++++|+++.|||+||.+.+...+++.|.||||||+||+ +|++..+|+..+|..++.+++++.+++
T Consensus 119 ~g~~~a~~~iCtHlGc~p~~~~~~~~~~~CPcHGs~FD~-~G~v~~gPa~~~L~v~p~~v~~~~I~v 184 (185)
T 3cx5_E 119 DPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDI-SGRIRKGPAPLNLEIPAYEFDGDKVIV 184 (185)
T ss_dssp STTEEEEECCCTTTSCCCEEEETTTTEEEETTTTEEECT-TCCEEESSCCSCCCCCCEEEETTEEEE
T ss_pred CCeEEEEecccCCCCceeccCCCCCCEEEcCCCCCEECC-CCCEecCCCCCCcceEEEEEECCEEEE
Confidence 589999999999999964333335579999999999999 899999999889988888886665553
No 235
>2zyl_A Possible oxidoreductase; KSHA, cholesterol, rieske; 2.30A {Mycobacterium tuberculosis}
Probab=99.10 E-value=9.4e-11 Score=137.00 Aligned_cols=79 Identities=16% Similarity=0.303 Sum_probs=68.7
Q ss_pred CCCCEEEEEeeCCeEEEEeCCCCCCCcccCCceecCCEEEccCCCceEECCCCeeecCCCC------CCCCeEEEEEEcC
Q psy2951 493 SSTPKTLAQSTTSNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGM------DSLPCYKVTIQND 566 (1466)
Q Consensus 493 ~~~~~~~~~~~~g~~~a~~~~C~H~~~~l~~g~~~~~~~~Cp~H~~~f~~~~G~~~~~p~~------~~l~~~~v~i~~~ 566 (1466)
.+..++++++.+|+++|++|.|||+|++|+.|.++++.|+||||||+|+. +|+|...|+. .+++.|++++.+|
T Consensus 46 ~g~~vvl~R~~~G~v~a~~n~CpHrga~L~~g~~~~~~i~CpyHgw~f~~-~G~~~~~P~~~~~~~~~~l~~~~v~~~~G 124 (386)
T 2zyl_A 46 FGTKLVVFADSHGDLKVLDGYCRHMGGDLSEGTVKGDEVACPFHDWRWGG-DGRCKLVPYARRTPRMARTRSWTTDVRSG 124 (386)
T ss_dssp TTEEEEEEECTTSCEEEEESBCTTTCCBGGGSEEETTEEECTTTCCEEET-TSBEEECTTCSSCCTTCBCCEECEEEETT
T ss_pred CCeEEEEEECCCCCEEEEcCcCCCCCCCCCCCcccCCEEEeCCCCCEECC-CCCccccCcccccCcccCcceEeEEEECC
Confidence 33555666667999999999999999999999998899999999999999 7999999874 4689999999888
Q ss_pred eEEEEE
Q psy2951 567 DSVVVQ 572 (1466)
Q Consensus 567 ~~~~~~ 572 (1466)
.+|+..
T Consensus 125 ~v~v~~ 130 (386)
T 2zyl_A 125 LLFVWH 130 (386)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 888765
No 236
>2jza_A Nitrite reductase [NAD(P)H] small subunit; ISP domain, rieske iron-sulfur protein, 3-layer beta- sandwich; NMR {Pectobacterium atrosepticum SCRI1043} SCOP: b.33.1.3
Probab=99.10 E-value=5e-11 Score=115.47 Aligned_cols=75 Identities=17% Similarity=0.245 Sum_probs=64.1
Q ss_pred hhhhhh-hhhhhcCCCCCCCc-cccceeec---CC-EEEcCCCCceeecCCCccccCCCCCCCCeEEEEEEcCCEEEEEc
Q psy2951 971 AQFAER-NIYAVGTKCSHYGA-PLVKGSLG---DG-RVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVVQA 1044 (1466)
Q Consensus 971 ~~~~~g-~~~a~~~~C~h~g~-~l~~g~~~---~~-~~~cp~h~~~f~~~~g~~~~~p~~~~l~~~~v~~~~~~~~~~~~ 1044 (1466)
++..+| +++|+.+.|||.++ +|..|.+. ++ .+.||||||+|+++||++...|+ .+|++|++++ .++.+++..
T Consensus 31 ~r~~~g~~v~A~~n~CpH~g~~~L~~G~~~~~~g~~~i~CP~Hg~~Fdl~tG~~~~~P~-~~L~~~~v~v-~~g~V~V~~ 108 (130)
T 2jza_A 31 FRPRNDEQVYAISNIDPFAQASVLSRGIVAEHQDDLWVASPLKKQHFRLYDGFCLEDGA-YSVAAYDTQV-TNGNVQISI 108 (130)
T ss_dssp EBCSSSSCCEEEBCCCTTTSSGGGTSSEEEESSSSEEEECSSSCCEEETTTCCBSSCCS-SCCBCCCEEE-SSSEEEEEC
T ss_pred EEECCCCEEEEEeCcCCCCCCCcCCCccCcccCCCeEEECCCCCCEEeCCCcCCCCCCc-CcceEEEEEE-ECCEEEEEe
Confidence 343356 89999999999999 59999885 33 89999999999999999999887 7899999998 789999976
Q ss_pred chh
Q psy2951 1045 RKD 1047 (1466)
Q Consensus 1045 ~~~ 1047 (1466)
...
T Consensus 109 ~~~ 111 (130)
T 2jza_A 109 ADS 111 (130)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 237
>1rie_A Rieske iron-sulfur protein; oxidoreductase, cytochrome BC1 complex, histidine ligands, rieske iron-sulfur cluster, electron transport; 1.50A {Bos taurus} SCOP: b.33.1.1
Probab=99.09 E-value=2.9e-11 Score=116.49 Aligned_cols=70 Identities=23% Similarity=0.380 Sum_probs=62.3
Q ss_pred hhhhhhhhhhcCCCCCCCccccceeecCCEEEcCCCCceeecCCCccccCCCCCCCCeEEEEEEcCCEEEE
Q psy2951 972 QFAERNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVV 1042 (1466)
Q Consensus 972 ~~~~g~~~a~~~~C~h~g~~l~~g~~~~~~~~cp~h~~~f~~~~g~~~~~p~~~~l~~~~v~~~~~~~~~~ 1042 (1466)
+..+|+++|+.+.|||.|++|..|...++.+.||||||+||+ +|++...|+..+|+.|++++.+++.+++
T Consensus 59 r~~~g~~~a~~~~C~H~g~~l~~g~~~~~~i~CP~Hg~~fd~-~G~~~~~P~~~~l~~~~v~v~~~~~v~v 128 (129)
T 1rie_A 59 RVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDA-SGRIRKGPAPLNLEVPSYEFTSDDMVIV 128 (129)
T ss_dssp TCSSTTEEEEECCCTTTSCCCEETCTTTEEEEETTTTEEEET-TCCEEESSCCSCCCCCCEEESSSSEEEE
T ss_pred cccCCeEEEEECccCCCCeecccccCCCCEEEcCCCCCEEcC-CCCEeeCCCCCCCCceeEEEEeCCEEEE
Confidence 334789999999999999999999887889999999999998 9999999999999999999855666665
No 238
>3vca_A Ring-hydroxylating dioxygenase; rieske-type, mononuclear non-heme iron, N-demethylase, oxido; 1.59A {Sinorhizobium meliloti} PDB: 3vcp_A
Probab=99.04 E-value=2.9e-10 Score=132.70 Aligned_cols=80 Identities=14% Similarity=0.228 Sum_probs=68.0
Q ss_pred CCCCEEEEEeeCCeEEEEeCCCCCCCcccC-CceecCCEEEccCCCceEECCCCeeecCCCC--------CCCCeEEEEE
Q psy2951 493 SSTPKTLAQSTTSNIYAVGTKCSHYGAPLV-KGSLGDGRVRCPWHGACFNIATGDIEDFPGM--------DSLPCYKVTI 563 (1466)
Q Consensus 493 ~~~~~~~~~~~~g~~~a~~~~C~H~~~~l~-~g~~~~~~~~Cp~H~~~f~~~~G~~~~~p~~--------~~l~~~~v~i 563 (1466)
++..++++++.+|+++|++|.|||+|++|+ .|...++.|+||||||+|++ +|+|...|+. .+|+.|++++
T Consensus 65 ~g~~vvv~R~~dG~v~A~~n~CpHrga~L~~~g~~~~~~i~CPyHgw~fdl-dG~~~~~P~~~~~~~~~~~~L~~~~v~~ 143 (412)
T 3vca_A 65 GAYEVVIVRSRDGEVRAFHNSCRHRGSLICKARQGQVAKLVCPYHQWTYEL-DGKLIWANDMGPDFDASKYGLKPVNLRN 143 (412)
T ss_dssp TTEEEEEEECTTSCEEEEESSCTTTCCCSCCSSEEECSSEECTTTCCEECT-TSCEEECTTCCTTCCGGGCSCCEEEEEE
T ss_pred CCEEEEEEEcCCCCEEEecccCCCCCCEeecccccCCCEEEcCCCCCEEcC-CCccccCCccccccCcccCCCcEEEEEE
Confidence 445566666678999999999999999997 78888889999999999999 7999998864 3689999999
Q ss_pred EcCeEEEEEc
Q psy2951 564 QNDDSVVVQA 573 (1466)
Q Consensus 564 ~~~~~~~~~~ 573 (1466)
.+|.+|+...
T Consensus 144 ~~G~V~v~~~ 153 (412)
T 3vca_A 144 LDGLIYICLS 153 (412)
T ss_dssp ETTEEEEECS
T ss_pred ECCEEEEEec
Confidence 8888877543
No 239
>3n0q_A Putative aromatic-ring hydroxylating dioxygenase; rieske [2Fe-2S] domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.80A {Ruegeria SP}
Probab=99.03 E-value=3.7e-10 Score=131.73 Aligned_cols=80 Identities=16% Similarity=0.251 Sum_probs=67.8
Q ss_pred CCCCEEEEEeeCCeEEEEeCCCCCCCcccCC-ceecCCEEEccCCCceEECCCCeeecCCCC--------CCCCeEEEEE
Q psy2951 493 SSTPKTLAQSTTSNIYAVGTKCSHYGAPLVK-GSLGDGRVRCPWHGACFNIATGDIEDFPGM--------DSLPCYKVTI 563 (1466)
Q Consensus 493 ~~~~~~~~~~~~g~~~a~~~~C~H~~~~l~~-g~~~~~~~~Cp~H~~~f~~~~G~~~~~p~~--------~~l~~~~v~i 563 (1466)
++..++++++.+|+++|++|.|||+|++|+. |...++.|+||||||+|+. +|+|...|+. .+|+.|++++
T Consensus 63 ~g~~vvv~R~~dG~v~A~~n~C~Hrga~L~~~g~~~~~~i~CpyHgw~fd~-dG~~~~~P~~~~~~~~~~~~L~~~~v~~ 141 (409)
T 3n0q_A 63 GNYNVIIVRGADNVIRAFHNACRHRGSVICKAKKGNNPKLVCPYHQWTYEL-DGRLLWARDMGPDFEPSRHGLKTVHCRE 141 (409)
T ss_dssp TTEEEEEEECTTSCEEEEESCCTTTCCCSCCSSEEECSSEECTTTCCEECT-TSCEEECTTCCTTCCGGGCSCCEEEEEE
T ss_pred CCEEEEEEEcCCCCEEeecCcCCcCcCCccCcCccCCCEEEECCCCCEEeC-CCCcccCCcCCcccCcccCCCceEEEEE
Confidence 4455666666799999999999999999986 8888889999999999999 7999998864 3789999999
Q ss_pred EcCeEEEEEc
Q psy2951 564 QNDDSVVVQA 573 (1466)
Q Consensus 564 ~~~~~~~~~~ 573 (1466)
.+|.+|+...
T Consensus 142 ~~G~Vfv~~~ 151 (409)
T 3n0q_A 142 LAGLIYICLA 151 (409)
T ss_dssp ETTEEEEECS
T ss_pred ECCEEEEEeC
Confidence 8888877643
No 240
>2de6_A Terminal oxygenase component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Janthinobacterium} SCOP: b.33.1.2 d.129.3.3 PDB: 1ww9_A 2de5_A 2de7_A*
Probab=99.00 E-value=4.3e-10 Score=132.36 Aligned_cols=79 Identities=15% Similarity=0.266 Sum_probs=65.9
Q ss_pred CCCEEEEEeeCCeEEEEeCCCCCCCcccCCcee--cCCEEEccCCCceEECCCCeeecCCCC--------CCCCeEEEEE
Q psy2951 494 STPKTLAQSTTSNIYAVGTKCSHYGAPLVKGSL--GDGRVRCPWHGACFNIATGDIEDFPGM--------DSLPCYKVTI 563 (1466)
Q Consensus 494 ~~~~~~~~~~~g~~~a~~~~C~H~~~~l~~g~~--~~~~~~Cp~H~~~f~~~~G~~~~~p~~--------~~l~~~~v~i 563 (1466)
+..+++++ .+|+++|++|.|||+|++|+.|.+ .++.|+||||||+|+.++|+|...|+. .+|+.|++++
T Consensus 50 g~~vvl~R-~~G~v~a~~n~CpHrga~L~~g~~~~~~~~i~CpyHgw~f~~~~G~~~~~p~~p~~~~~~~~~l~~~~v~~ 128 (392)
T 2de6_A 50 GENLLVNR-IDGKLYCLKDRCLHRGVQLSVKVECKTKSTITCWYHAWTYRWEDGVLCDILTNPTSAQIGRQKLKTYPVQE 128 (392)
T ss_dssp TEEEEEEE-ETTEEEEEESSCTTTCCCGGGGCCCCSTTEEECTTTCEEEETTTCBEEEETTCTTCTTTTSCBCCBCCEEE
T ss_pred CEEEEEEE-eCCEEEEEeCcCCCCCCCCcCCcccCCCCEEEeCCCCCEEcCCCCccccccCCccccccccCCCceEeEEE
Confidence 35555555 799999999999999999999986 357999999999999988999987542 3688999999
Q ss_pred EcCeEEEEEc
Q psy2951 564 QNDDSVVVQA 573 (1466)
Q Consensus 564 ~~~~~~~~~~ 573 (1466)
.+|.+|+...
T Consensus 129 ~~G~v~v~~~ 138 (392)
T 2de6_A 129 AKGCVFIYLG 138 (392)
T ss_dssp ETTEEEEEES
T ss_pred ECCEEEEEeC
Confidence 8888887664
No 241
>1g8k_B Arsenite oxidase; molybdopterin, [3Fe-4S] cluster, [2Fe-2S] rieske, oxidoreductase; HET: MGD; 1.64A {Alcaligenes faecalis} SCOP: b.33.1.1 PDB: 1g8j_B*
Probab=98.98 E-value=2.9e-10 Score=110.21 Aligned_cols=69 Identities=20% Similarity=0.354 Sum_probs=61.0
Q ss_pred hhhhhhhcCCCCCCCccccceeecCCEEEcCCCCceeecC-CCccccCCCCCCCCeEEEEEEc-CCEEEEEc
Q psy2951 975 ERNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIA-TGDIEDFPGMDSLPCYKVTIQN-DDSVVVQA 1044 (1466)
Q Consensus 975 ~g~~~a~~~~C~h~g~~l~~g~~~~~~~~cp~h~~~f~~~-~g~~~~~p~~~~l~~~~v~~~~-~~~~~~~~ 1044 (1466)
+|+++|+.+.|||.+++|.. ...++.+.||||||+|+++ +|++...|+..+|+.|+++++. ++.+++..
T Consensus 50 ~g~~~A~~n~CpH~g~~L~~-~~~~~~i~CP~Hg~~Fd~~~~G~~~~gP~~~~L~~~~v~v~~~g~~V~v~g 120 (133)
T 1g8k_B 50 DDDIVAYSVLCTHMGCPTSY-DSSSKTFSCPCHFTEFDAEKAGQMICGEATADLPRVLLRYDAASDALTAVG 120 (133)
T ss_dssp TTCEEEEECBCTTTCCBCEE-ETTTTEEECTTTCCEEEGGGTTEEEESSCSSCCCEEEEEEETTTTEEEEEE
T ss_pred CCEEEEEeCcCCCCCCCCCc-ccCCCEEECCCCCCEECCCCCCCEEcCCCCCCCCEEEEEEECCCCEEEEEe
Confidence 78999999999999999987 3567999999999999998 9999999999999999999964 56677654
No 242
>1z01_A 2-OXO-1,2-dihydroquinoline 8-monooxygenase, oxygenase component; rieske center, oxygen binding/activation, substrate bound complex; 1.80A {Pseudomonas putida} SCOP: b.33.1.2 d.129.3.3 PDB: 1z02_A 1z03_A*
Probab=98.98 E-value=6.7e-10 Score=132.70 Aligned_cols=81 Identities=21% Similarity=0.416 Sum_probs=66.9
Q ss_pred CCCCEEEEEeeCCeEEEEeCCCCCCCcccCCcee--cCCEEEccCCCceEECCCCeeecCCC--------CCCCCeEEEE
Q psy2951 493 SSTPKTLAQSTTSNIYAVGTKCSHYGAPLVKGSL--GDGRVRCPWHGACFNIATGDIEDFPG--------MDSLPCYKVT 562 (1466)
Q Consensus 493 ~~~~~~~~~~~~g~~~a~~~~C~H~~~~l~~g~~--~~~~~~Cp~H~~~f~~~~G~~~~~p~--------~~~l~~~~v~ 562 (1466)
.+..+++ ++.+|+++|++|.|||+|++|+.|.+ .++.|+||||||+|++.+|+|...|+ ..+|+.|+++
T Consensus 64 ~g~~vvl-~r~~G~v~a~~n~CpHrga~L~~g~~~~~~~~i~CpyHgw~fd~~~G~~~~~p~~p~~~~~~~~~l~~~~v~ 142 (446)
T 1z01_A 64 CGVPIVL-RRVNGKVFALKDQCLHRGVRLSEKPTCFTKSTISCWYHGFTFDLETGKLVTIVANPEDKLIGTTGVTTYPVH 142 (446)
T ss_dssp TTEEEEE-EEETTEEEEEESSCTTTCCCGGGSCCCSSTTEEECTTTCEEEETTTCBEEEETTCTTCTTTTSCBCCEECEE
T ss_pred CCEEEEE-EEeCCEEEEEeCcCCCCcCCCCCCccCCCCCEEEeCCCCeEEeCCCCCccccCCCccccCcccCCCcEEEEE
Confidence 3344554 45899999999999999999999974 56899999999999998899998754 2468999999
Q ss_pred EEcCeEEEEEcc
Q psy2951 563 IQNDDSVVVQAR 574 (1466)
Q Consensus 563 i~~~~~~~~~~~ 574 (1466)
+.+|.+|+....
T Consensus 143 ~~~G~V~v~~~~ 154 (446)
T 1z01_A 143 EVNGMIFVFVRE 154 (446)
T ss_dssp EETTEEEEEECC
T ss_pred EECCEEEEEeCC
Confidence 988888876543
No 243
>1rfs_A Rieske protein; iron-sulfur protein, electron transport; 1.83A {Spinacia oleracea} SCOP: b.33.1.1 PDB: 1q90_C*
Probab=98.98 E-value=4.1e-10 Score=109.67 Aligned_cols=69 Identities=22% Similarity=0.491 Sum_probs=61.6
Q ss_pred hhhhhh--hhhcCCCCCCCccccceeecCCEEEcCCCCceeecCCCccccCCCCCCCCeEEEEEEcCCEEEEEc
Q psy2951 973 FAERNI--YAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVVQA 1044 (1466)
Q Consensus 973 ~~~g~~--~a~~~~C~h~g~~l~~g~~~~~~~~cp~h~~~f~~~~g~~~~~p~~~~l~~~~v~~~~~~~~~~~~ 1044 (1466)
..+|++ +|+.+.|||.+++|..+. .++.+.||||||+|+ .+|++...|+..+|+.|++++ .++.+++..
T Consensus 53 ~~~G~i~~~A~~n~CpH~g~~L~~g~-~~~~i~CP~Hg~~Fd-~tG~~~~~P~~~~L~~~~v~v-~~g~V~V~~ 123 (139)
T 1rfs_A 53 ESDKTLATFGINAVCTHLGCVVPFNA-AENKFICPCHGSQYN-NQGRVVRGPAPLSLALAHCDV-DDGKVVFVP 123 (139)
T ss_dssp CTTSSBCSEEEECBCTTTCCBCCEET-TTTEEECTTTCCEEE-TTCCEEESSCCSCCCEEEEEE-ETTEEEEEE
T ss_pred eCCCcEEEEEEeCcCCCCCCCCccCC-CCCEEEcCCCCCEEC-CCCCCccCCCCCCCCEEEEEE-ECCEEEEEe
Confidence 346777 999999999999999887 578999999999999 599999999989999999999 678888864
No 244
>2gbw_A Biphenyl 2,3-dioxygenase alpha subunit; rieske oxygenase, oxidoreductase, non heme iron; 1.70A {Sphingobium yanoikuyae} PDB: 2gbx_A* 2ckf_A
Probab=98.97 E-value=9.4e-10 Score=132.07 Aligned_cols=80 Identities=18% Similarity=0.275 Sum_probs=65.6
Q ss_pred CCCCCEEEEEeeCCeEEEEeCCCCCCCcccCCcee-cCCEEEccCCCceEECCCCeeecCCCCC------------CCCe
Q psy2951 492 ASSTPKTLAQSTTSNIYAVGTKCSHYGAPLVKGSL-GDGRVRCPWHGACFNIATGDIEDFPGMD------------SLPC 558 (1466)
Q Consensus 492 ~~~~~~~~~~~~~g~~~a~~~~C~H~~~~l~~g~~-~~~~~~Cp~H~~~f~~~~G~~~~~p~~~------------~l~~ 558 (1466)
.++..++++++.+|+++|++|.|||+|++|++|.. .++.|+||||||+|+. +|+|...|+.. +|+.
T Consensus 58 ~~~~~vvv~R~~~G~v~a~~n~CpHrga~L~~g~~g~~~~i~CpyHgw~f~~-~G~~~~~P~~~~~~~~~~~~~~~~l~~ 136 (454)
T 2gbw_A 58 MAEDKVILSHQSDGTFRAFINSCSHRGNQICHADSGNAKAFVCNYHGWVFGQ-DGSLVDVPLESRCYHNSLDKQKLAAKS 136 (454)
T ss_dssp ETTEEEEEEECTTSCEEEEESSCTTTCCCSCCCSEEECSEEECTTTCCEEET-TSCEEECTTTTTTTTTCCCGGGCCCCE
T ss_pred ECCeEEEEEEcCCCCEEEEeccCCCCCCCCcccccCCcCEEEeCCCCCEecC-CCCcccCCcccccccccCCHhhCCCee
Confidence 34344555555799999999999999999998876 5679999999999999 69999988753 4788
Q ss_pred EEEEEEcCeEEEEE
Q psy2951 559 YKVTIQNDDSVVVQ 572 (1466)
Q Consensus 559 ~~v~i~~~~~~~~~ 572 (1466)
+++++.+|.+|+..
T Consensus 137 ~~v~~~~G~v~v~~ 150 (454)
T 2gbw_A 137 VRVETYKGFIFGCH 150 (454)
T ss_dssp EEEEEETTEEEEEC
T ss_pred EEEEEECCEEEEEe
Confidence 99998888777653
No 245
>3azc_A Cytochrome B6-F complex iron-sulfur subunit; rieske, thermosynechococcus elongatu photosynthesis, electron transport; 2.00A {Thermosynechococcus elongatus}
Probab=98.51 E-value=6.6e-11 Score=113.05 Aligned_cols=78 Identities=24% Similarity=0.458 Sum_probs=65.9
Q ss_pred cCchhhhhhhhhh--hhhhcCCCCCCCccccceeecCCEEEcCCCCceeecCCCccccCCCCCCCCeEEEEEEcCCEEEE
Q psy2951 965 GMDPLAAQFAERN--IYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVV 1042 (1466)
Q Consensus 965 g~~~~~~~~~~g~--~~a~~~~C~h~g~~l~~g~~~~~~~~cp~h~~~f~~~~g~~~~~p~~~~l~~~~v~~~~~~~~~~ 1042 (1466)
+...++++..+|+ ++|+.+.|||.+++|..|. .++.+.||||||+|+ .+|+++..|+..+|+.|+++++.++.+++
T Consensus 39 g~~~vlv~~~~G~~~v~A~~n~CpH~g~~L~~g~-~~~~i~CP~Hg~~Fd-~tG~~~~~P~~~~L~~ypv~v~~~g~V~V 116 (133)
T 3azc_A 39 GDPTYVIVTEDHQIANYGLNAVCTHLGCVVPWNV-SENKFICPCHGSQYD-STGKVVRGPAPLSLALVKATVTEDDKLVF 116 (133)
Confidence 3334445556777 9999999999999999887 678999999999999 99999999998899999999856777777
Q ss_pred Ec
Q psy2951 1043 QA 1044 (1466)
Q Consensus 1043 ~~ 1044 (1466)
..
T Consensus 117 ~~ 118 (133)
T 3azc_A 117 TP 118 (133)
Confidence 53
No 246
>3d89_A Rieske domain-containing protein; CAsp target, rieske ferredoxin, [2Fe-2S] cluster, protein ST initiative, PSI; 2.07A {Mus musculus}
Probab=98.95 E-value=2.4e-10 Score=115.03 Aligned_cols=75 Identities=25% Similarity=0.427 Sum_probs=61.5
Q ss_pred hhhhhhhhhhhhcCCCCCCCccccceeecC----CEEEcCCCCceeecCCCcccc---CC----CC-------CCCCeEE
Q psy2951 970 AAQFAERNIYAVGTKCSHYGAPLVKGSLGD----GRVRCPWHGACFNIATGDIED---FP----GM-------DSLPCYK 1031 (1466)
Q Consensus 970 ~~~~~~g~~~a~~~~C~h~g~~l~~g~~~~----~~~~cp~h~~~f~~~~g~~~~---~p----~~-------~~l~~~~ 1031 (1466)
+++ .+|+++|+.+.|||.+++|..|.+.+ +.+.||||||+|++++|+++. .| +. .+|+.|+
T Consensus 43 v~r-~~G~v~A~~n~CpH~g~~L~~G~~~~~~g~~~i~CP~Hgw~Fdl~tG~~~~~~i~P~~~~~~~~~~~~~~~L~~~~ 121 (157)
T 3d89_A 43 IFY-HKGEYHAMDIRCYHSGGPLHLGEIEDFNGQSCIVCPWHKYKITLATGEGLYQSINPKDPSAKPKWCSKGVKQRIHT 121 (157)
T ss_dssp EEE-ETTEEEEEESBCTTTCCBGGGSEEEEETTEEEEECTTTCCEEETTTCEEEEEECCCC-----CEEEEEEECSCEEE
T ss_pred EEE-ECCEEEEEeCCCCCCCCCCcCCEecCcCCCCEEECCCCCCEEecCCcCEEEeccCCCccccccccccccCcceEEE
Confidence 344 47899999999999999999998864 689999999999999999874 13 22 3689999
Q ss_pred EEEEcCCEEEEEcch
Q psy2951 1032 VTIQNDDSVVVQARK 1046 (1466)
Q Consensus 1032 v~~~~~~~~~~~~~~ 1046 (1466)
+++ .++.++++...
T Consensus 122 v~v-~~G~V~V~~~~ 135 (157)
T 3d89_A 122 VKV-DNGNIYVTLSK 135 (157)
T ss_dssp EEE-ETTEEEEECCC
T ss_pred EEE-ECCEEEEEeCC
Confidence 998 68888887653
No 247
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.94 E-value=1.6e-09 Score=122.46 Aligned_cols=166 Identities=17% Similarity=0.157 Sum_probs=115.0
Q ss_pred CeEEEEcCCHHHHHHHHHHhcC-CCeEEEEcCCCcCCcc------------------------------------c-ccH
Q psy2951 1206 SNVVVIGSSFIGMEAAAFCASK-VKSVTVVGRGAVPFQE------------------------------------S-LGK 1247 (1466)
Q Consensus 1206 ~~vvVvG~g~~g~e~a~~l~~~-g~~v~vv~~~~~~~~~------------------------------------~-~~~ 1247 (1466)
.+|+|||+|++|+.+|..|++. |.+|+++++.+.+... . ...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 4799999999999999999997 9999999988644210 0 123
Q ss_pred HHHHHHHHHHHh-CCcEEEcCceEEEEEecCCCcEEEEEcC---------CC-----CeeecCEEEEeeccccCcc----
Q psy2951 1248 EVGERITKLFES-KGVKFVMKANVSSFEKNEKNDVTAANLD---------NG-----TTIPADLVIVGIGTVLNTN---- 1308 (1466)
Q Consensus 1248 ~~~~~l~~~~~~-~gv~~~~~~~v~~i~~~~~g~~~~v~l~---------~g-----~~i~~D~vv~a~G~~p~~~---- 1308 (1466)
++...+.+.+.+ .||+++++++|+++. .+++++..|.+. +| .++++|.||+|+|..+...
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~-~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~ 198 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLI-VKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGV 198 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEE-EETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHH
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEE-ecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHH
Confidence 455556666655 699999999999998 445566566552 32 5789999999999877643
Q ss_pred -ccccCC--ceeeCCCeEEeCC-------CccccCCCEEEecccccCCCccCCCceeeeecHHHHHHHHHHHHHHhcC
Q psy2951 1309 -YLDGKG--VELNGQKAVVVNE-------YLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVE 1376 (1466)
Q Consensus 1309 -~~~~~g--l~~~~~G~i~vd~-------~~~t~~~~v~a~GD~a~~p~~~~~~~~~~~~~~~~A~~qa~~aa~~i~g 1376 (1466)
++...+ +.+....++.+|. ..+++.|++|++||++... .|.+.....|..+..||+.+|.++..
T Consensus 199 ~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~----~g~~~~gp~~~~~~~sG~~~a~~i~~ 272 (284)
T 1rp0_A 199 KRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEI----DGAPRMGPTFGAMMISGQKAGQLALK 272 (284)
T ss_dssp HHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHHHH----HTCEECCSCCHHHHHHHHHHHHHHHH
T ss_pred HHhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehhhh----cCCCCcChHHHHHHHhHHHHHHHHHH
Confidence 121112 1222222343332 3456789999999986431 12233334689999999999999985
No 248
>2bmo_A Oxygenase-alpha NBDO; nitrobenzene dioxygenase, nitroarene, rieske non-heme dioxygenase, substrate specificity iron- sulfur, metal-binding, NAD; 1.2A {Comamonas SP} SCOP: b.33.1.2 d.129.3.3 PDB: 2bmq_A 2bmr_A* 2hmj_A 2hml_A* 2hmn_A* 1o7n_A 1ndo_A 1o7g_A* 1o7h_A 1o7m_A 1eg9_A 1o7p_A* 1o7w_A 1uuv_A 1uuw_A 2hmk_A* 2hmm_A* 2hmo_A*
Probab=98.92 E-value=9.2e-10 Score=132.03 Aligned_cols=79 Identities=15% Similarity=0.214 Sum_probs=65.0
Q ss_pred CCCCCEEEEEeeCCeEEEEeCCCCCCCcccCCcee-cCCEEEccCCCceEECCCCeeecCCCC------------CCCCe
Q psy2951 492 ASSTPKTLAQSTTSNIYAVGTKCSHYGAPLVKGSL-GDGRVRCPWHGACFNIATGDIEDFPGM------------DSLPC 558 (1466)
Q Consensus 492 ~~~~~~~~~~~~~g~~~a~~~~C~H~~~~l~~g~~-~~~~~~Cp~H~~~f~~~~G~~~~~p~~------------~~l~~ 558 (1466)
.++..++++++.+|+++|++|.|||+|++|+.|.. .++.++||||||+|+. +|+|...|+. .+|+.
T Consensus 57 ~~~~~vvv~R~~~G~v~a~~n~CpHrga~L~~g~~g~~~~l~CpyHgw~f~~-~G~~~~~P~~~~~~~~~~~~~~~~l~~ 135 (447)
T 2bmo_A 57 MGVDEVIVSRQNDGSVRAFLNVCRHRGKTLVHAEAGNAKGFVCGYHGWGYGS-NGELQSVPFEKELYGDAIKKKCLGLKE 135 (447)
T ss_dssp ETTEEEEEEECTTSCEEEEESBCTTTCCBCCCSSEEECSEEECTTTCCEEET-TSCEEECTTHHHHTGGGCCGGGCCCCB
T ss_pred ECCeeEEEEECCCCCEEEEeccCcCCCCCccccccCCcCeEECCCCcchhcC-CCcccccCcccccccccCCHhHCCCcc
Confidence 34444556666799999999999999999998876 4679999999999999 7999998863 26888
Q ss_pred EE-EEEEcCeEEEE
Q psy2951 559 YK-VTIQNDDSVVV 571 (1466)
Q Consensus 559 ~~-v~i~~~~~~~~ 571 (1466)
|+ +++.+|.+|++
T Consensus 136 ~~~v~~~~G~v~v~ 149 (447)
T 2bmo_A 136 VPRIESFHGFIYGC 149 (447)
T ss_dssp CSEEEEETTEEEEE
T ss_pred cceEEEECCEEEEE
Confidence 97 98877777765
No 249
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.91 E-value=7.6e-09 Score=125.96 Aligned_cols=146 Identities=9% Similarity=0.084 Sum_probs=94.5
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCC-CCCCCCCccc----------hh---cc----------------
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN-FLPYDRVKLS----------KQ---LD---------------- 644 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~-~~~~~~~~~~----------~~---~~---------------- 644 (1466)
.+||+|||||+||++||..|++.|.+ |+++|+.. .++...+... .. +.
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~k--VlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~ 104 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAK--TAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKM 104 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC--EEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCC--EEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceee
Confidence 58999999999999999999999988 77787763 1111111000 00 00
Q ss_pred ---------------cCcccccccCHhHhhh-CCcEEEEceEEEEecccccc--EEEccCCCEEecCEEEEcCCCCCCcC
Q psy2951 645 ---------------IKADSILLRTEEFYKD-NDIHVIKGKKIISDSELNEK--KIKLQDGTSIDFTKIYLATGSSPRTI 706 (1466)
Q Consensus 645 ---------------~~~~~~~~~~~~~~~~-~gv~~~~~~~v~~i~~~~~~--~v~~~~~~~~~~d~lviAtG~~~~~~ 706 (1466)
.+...+...+.+.+++ .|++++. ++|+.+...+.. .|.+.+|..+.+|+||+|||+.+..+
T Consensus 105 l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~-~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~ 183 (637)
T 2zxi_A 105 LNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQ-EEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGV 183 (637)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-SCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTCE
T ss_pred cccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEE-eEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccCc
Confidence 0001112223344555 4999965 458887222222 36777888999999999999988877
Q ss_pred CCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEee
Q psy2951 707 SQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGR 765 (1466)
Q Consensus 707 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~ 765 (1466)
.++ |.... . +.+ .|+.+++++|..|.+.|.+++.+.+
T Consensus 184 ~~~-G~~~~-~----------------~Gr----~G~~~A~~la~~L~~lG~~v~~l~t 220 (637)
T 2zxi_A 184 IYI-GDKMI-P----------------GGR----LGEPRSEGLSDFYRRFDFPLIRFKT 220 (637)
T ss_dssp EEE-TTEEE-E----------------CSB----TTBCCBCTHHHHHHHTTCCCEEEEE
T ss_pred eec-cceec-C----------------CCC----CCchhHHHHHHHHHhcCCceEEecC
Confidence 777 65411 0 222 2356789999999999988776653
No 250
>1uli_A Biphenyl dioxygenase large subunit; alpha3 BETA3 hetero hexamer, oxidoreductase; 2.20A {Rhodococcus SP} SCOP: b.33.1.2 d.129.3.3 PDB: 1ulj_A* 3en1_A* 3eqq_A
Probab=98.89 E-value=1.3e-09 Score=130.82 Aligned_cols=79 Identities=14% Similarity=0.241 Sum_probs=64.4
Q ss_pred CCCCCEEEEEeeCCeEEEEeCCCCCCCcccCCcee-cCCEEEccCCCceEECCCCeeecCCCC-----------CCCCeE
Q psy2951 492 ASSTPKTLAQSTTSNIYAVGTKCSHYGAPLVKGSL-GDGRVRCPWHGACFNIATGDIEDFPGM-----------DSLPCY 559 (1466)
Q Consensus 492 ~~~~~~~~~~~~~g~~~a~~~~C~H~~~~l~~g~~-~~~~~~Cp~H~~~f~~~~G~~~~~p~~-----------~~l~~~ 559 (1466)
.++..++++++.+|+++|++|+|||+|++|++|.. .++.|+||||||+|+. +|+|...|+. .+|+.+
T Consensus 76 i~~~~vvv~R~~~G~v~a~~n~CpHrga~L~~g~~g~~~~i~CpyHgw~fd~-~G~~~~~P~~~~~~~~~~~~~~~L~~~ 154 (460)
T 1uli_A 76 MGEDPVMVVRQKNGEIRVFLNQCRHRGMRICRADGGNAKSFTCSYHGWAYDT-GGNLVSVPFEEQAFPGLRKEDWGPLQA 154 (460)
T ss_dssp ETTEEEEEEECTTSCEEEEESCCTTTCCCSCCSSEEECSCEECTTTCCEECT-TCCEEECTTHHHHCTTCCGGGSSCCEE
T ss_pred ECCeEEEEEEcCCCCEEEEeeeCCCCCCCCccccCCCCCEEEcCCCCCEEeC-CCCEeeCCccccccCCCCHhHcCCcee
Confidence 34344555555789999999999999999998876 4568999999999999 7999998863 247889
Q ss_pred EEEEEcCeEEEE
Q psy2951 560 KVTIQNDDSVVV 571 (1466)
Q Consensus 560 ~v~i~~~~~~~~ 571 (1466)
++++.+|.+|+.
T Consensus 155 ~v~~~~G~V~v~ 166 (460)
T 1uli_A 155 RVETYKGLIFAN 166 (460)
T ss_dssp EEEEETTEEEEE
T ss_pred eEEEECCEEEEE
Confidence 999888777764
No 251
>2nwf_A Ubiquinol-cytochrome C reductase iron-sulfur SUBU; rieske [2Fe-2S] ISP, oxidoreductase; HET: GOL; 1.10A {Rhodobacter sphaeroides} PDB: 2nuk_A 2nve_A 2num_A 2nvg_A 2nvf_A
Probab=98.89 E-value=6.9e-10 Score=107.71 Aligned_cols=67 Identities=21% Similarity=0.358 Sum_probs=59.7
Q ss_pred hhhhhhhcCCCCCCCccccc-eeecCCEEEcCCCCceeecCCCccccCCCCCCCCeEEEEEEcCCEEEE
Q psy2951 975 ERNIYAVGTKCSHYGAPLVK-GSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVV 1042 (1466)
Q Consensus 975 ~g~~~a~~~~C~h~g~~l~~-g~~~~~~~~cp~h~~~f~~~~g~~~~~p~~~~l~~~~v~~~~~~~~~~ 1042 (1466)
+|+++|+.+.|||.|++|.. +...++.+.||||||+||+ +|++...|+..+|+.|++++.+++.+++
T Consensus 73 ~g~~~a~~~~C~H~G~~l~~~~~~~~~~~~CP~Hgs~Fd~-~G~~~~gPa~~~L~~~pv~v~~d~~i~v 140 (141)
T 2nwf_A 73 AGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGSHWDS-AGRIRKGPAPENLPIPLAKFIDETTIQL 140 (141)
T ss_dssp TSCEEEEECCCTTTCCCCEEEEETTTTEEEETTTTEEECT-TSCEEESSCCSCCCBCSEEESSSSEEEE
T ss_pred CCcEEEEeCcCCCCCeEccccCccCCCEEEcCCCCCEECC-CCCCccCCCCCCCCceeEEEEECCEEEE
Confidence 77899999999999999998 6666689999999999998 8999999999999999999855676665
No 252
>3gzx_A Biphenyl dioxygenase subunit alpha; rieskie, non-heme iron, 2Fe-2S, aromatic hydroc catabolism, iron, iron-sulfur, metal-binding, NAD; HET: BNL MES; 1.58A {Comamonas testosteroni} PDB: 3gzy_A* 1wql_A 2xso_A 2xsh_A 2xrx_A* 2xr8_A* 2yfi_A 2yfj_A* 2yfl_A*
Probab=98.83 E-value=4.1e-09 Score=124.38 Aligned_cols=79 Identities=16% Similarity=0.304 Sum_probs=64.1
Q ss_pred CCCCEEEEEeeCCeEEEEeCCCCCCCcccCCce-ecCCEEEccCCCceEECCCCeeecCCCCC-----------------
Q psy2951 493 SSTPKTLAQSTTSNIYAVGTKCSHYGAPLVKGS-LGDGRVRCPWHGACFNIATGDIEDFPGMD----------------- 554 (1466)
Q Consensus 493 ~~~~~~~~~~~~g~~~a~~~~C~H~~~~l~~g~-~~~~~~~Cp~H~~~f~~~~G~~~~~p~~~----------------- 554 (1466)
++..++++++.+|+++|++|+|||+|++|+.|. ..++.++||||||+|+. +|+|...|+..
T Consensus 79 ~~~~vvv~R~~dG~v~A~~n~C~Hrga~L~~g~~g~~~~i~CpyHgw~fd~-~G~~~~~P~~~~~~~~~~~~~~~~~~~~ 157 (457)
T 3gzx_A 79 GEDPVIMVRQKDQSIKVFLNQCRHRGMRIVRSDGGNAKAFTCTYHGWAYDI-AGNLVNVPFEKEAFCDKKEGDCGFDKAD 157 (457)
T ss_dssp TTEEEEEEECTTSCEEEEESCCTTTCCCSCCSSEEECSEEECTTTCCEEET-TSCEEECTTHHHHTCSSSTTTTSCCGGG
T ss_pred CCEEEEEEECCCCeEEEEeCcCCCCCcCccCCCCCcCCEEEcCCCCCEecC-CCcceecCccccccccccccccccChhh
Confidence 445556666679999999999999999999885 56779999999999999 69999888631
Q ss_pred -CCCeEEEEEEcCeEEEEE
Q psy2951 555 -SLPCYKVTIQNDDSVVVQ 572 (1466)
Q Consensus 555 -~l~~~~v~i~~~~~~~~~ 572 (1466)
+|+.+++.+..+-+|++.
T Consensus 158 ~~L~~~~v~e~~G~Vfv~~ 176 (457)
T 3gzx_A 158 WGPLQARVETYKGLVFANW 176 (457)
T ss_dssp CCCCEEEEEEETTEEEEES
T ss_pred CCCceEeEEEECCEEEEec
Confidence 357889988777777654
No 253
>1nyk_A Rieske iron-sulfur protein; beta barrel, iron sulfur cluster, electron transport; 1.31A {Thermus thermophilus} SCOP: b.33.1.1 PDB: 3fou_A
Probab=98.82 E-value=1.8e-09 Score=108.00 Aligned_cols=68 Identities=21% Similarity=0.445 Sum_probs=61.6
Q ss_pred hhhhhcCCCCCCCccccceeecCCEEEcCCCCceeecCCCc-cccCCCCCCCCeEEEEEEcCCEEEEEcc
Q psy2951 977 NIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGD-IEDFPGMDSLPCYKVTIQNDDSVVVQAR 1045 (1466)
Q Consensus 977 ~~~a~~~~C~h~g~~l~~g~~~~~~~~cp~h~~~f~~~~g~-~~~~p~~~~l~~~~v~~~~~~~~~~~~~ 1045 (1466)
.++|+.+.|||.|++|..+...++.+.||||||+||+.||. +...|+..+|+.|++++ .++.+++...
T Consensus 79 gv~A~~~~CpH~G~~L~~g~~~~~~i~CP~Hgs~Fd~~tG~~~~~gPa~~~L~~~~v~v-~~g~V~v~~~ 147 (165)
T 1nyk_A 79 GVVAYSAVCTHLGCIVSQWVADEEAALCPCHGGVYDLRHGAQVIAGPPPRPVPQLPVRV-EDGVLVAAGE 147 (165)
T ss_dssp TEEEEECBCTTTCCBCCEEEGGGTEEECTTTCCEEEGGGTTEEEESSCSSCCCEECEEE-ETTEEEECSS
T ss_pred CEEEEEeecCCCCeEcccccCCCCEEECCCCCCEEcCCCCCeeecCCCCCCCcEEEEEE-ECCEEEEEec
Confidence 39999999999999999888888999999999999999997 88889989999999999 5788888643
No 254
>2b1x_A Naphthalene dioxygenase large subunit; rieske non-heme iron oxygenase, oxidoreductase; 2.00A {Rhodococcus SP} SCOP: b.33.1.2 d.129.3.3 PDB: 2b24_A
Probab=98.82 E-value=4.2e-09 Score=126.87 Aligned_cols=60 Identities=23% Similarity=0.518 Sum_probs=51.4
Q ss_pred CCCCEEEEEeeCCeEEEEeCCCCCCCcccCCceecC-CEEEccCCCceEECCCCeeecCCCC
Q psy2951 493 SSTPKTLAQSTTSNIYAVGTKCSHYGAPLVKGSLGD-GRVRCPWHGACFNIATGDIEDFPGM 553 (1466)
Q Consensus 493 ~~~~~~~~~~~~g~~~a~~~~C~H~~~~l~~g~~~~-~~~~Cp~H~~~f~~~~G~~~~~p~~ 553 (1466)
++..++++++.+|+++|++|+|||+|++|++|...+ +.|+||||||+|+. +|+|...|+.
T Consensus 67 ~g~~vvv~R~~~G~v~a~~n~C~Hrga~L~~g~~~~~~~i~CpyHgw~f~~-~G~~~~~P~~ 127 (470)
T 2b1x_A 67 SEDQFIVCRDEGGEIRGHLNACRHRGMQVCRAEMGNTSHFRCPYHGWTYSN-TGSLVGVPAG 127 (470)
T ss_dssp TTEEEEEEECTTSCEEEEESSCTTTCCCSCCSSEEECSEEECTTTCCEEET-TSCEEECTTT
T ss_pred CCeEEEEEEcCCCCEEEEecccCCCCCEeeccCcCCCCEEEECCCCCeecC-CCceeecCcc
Confidence 445555555579999999999999999999987764 69999999999999 7999999875
No 255
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.81 E-value=1e-08 Score=115.91 Aligned_cols=168 Identities=17% Similarity=0.160 Sum_probs=112.0
Q ss_pred CcEEEECCCHhHHHHHHHHhhC-CCEEEEEeecCccccc-------------------------------------ccCH
Q psy2951 183 SNVVVIGSSFIGMEAAAFCASK-VKSVTVVGRGAVPFQE-------------------------------------SLGK 224 (1466)
Q Consensus 183 ~~vvVvGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~~-------------------------------------~~~~ 224 (1466)
.+|+|||||++|+.+|..|++. |.+|+++++.+.+... ....
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 3799999999999999999997 9999999987543100 0124
Q ss_pred HHHHHHHHHHHh-CCcEEEcCceEEEEEecCCCCeEEEEcC---------CC-----cEEeccEEEEeeccccCccc---
Q psy2951 225 EVGERITKLFES-KGVKFVMKANVSSFEKNEKNDVTAANLD---------NG-----TTIPADLVIVGIGTVLNTNY--- 286 (1466)
Q Consensus 225 ~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~~~~v~~~---------~g-----~~i~~D~Vi~a~G~~p~~~~--- 286 (1466)
++...+.+.+.+ .|+++++++.|+++..++ +++..+.+. ++ .++.+|.||+|+|..++..-
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~-~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~ 198 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-NRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGV 198 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEET-TEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHH
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecC-CeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHH
Confidence 455566666655 699999999999997643 345444431 22 57999999999998775431
Q ss_pred --cccCC--ceecCCccEEECC-------CCCcCCCCEEEecccccccCccCCCCcceeccHHHHHHHHHHHHHHhcCCC
Q psy2951 287 --LDGKG--VELNGQKAVVVNE-------YLETNVPGVYAGGDIAYAPLHSFYNKNASIGHYQLAQYHGRIAALNMVEKK 355 (1466)
Q Consensus 287 --l~~~g--l~~~~~g~i~vd~-------~~~t~~~~iya~GD~~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~~~~ 355 (1466)
+...+ +.+.+...+.++. ..+++.|++|++||++.. +.|.......+..+..+|..+|.++....
T Consensus 199 ~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~----~~g~~~~gp~~~~~~~sG~~~a~~i~~~l 274 (284)
T 1rp0_A 199 KRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAE----IDGAPRMGPTFGAMMISGQKAGQLALKAL 274 (284)
T ss_dssp HHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHHH----HHTCEECCSCCHHHHHHHHHHHHHHHHHT
T ss_pred HHhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehhh----hcCCCCcChHHHHHHHhHHHHHHHHHHHh
Confidence 11111 1111222232332 235677999999998642 11222223356678899999999998644
No 256
>1pp9_E Ubiquinol-cytochrome C reductase iron-sulfur SUBU mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: b.33.1.1 f.23.12.1 PDB: 1bgy_E* 1be3_E* 1l0n_E* 1ntk_E* 1ntm_E* 1ntz_E* 1nu1_E* 1l0l_E* 1ppj_E* 1qcr_E* 1sqb_E* 1sqp_E* 1sqq_E* 1sqv_E* 1sqx_E* 2a06_E* 2fyu_E* 2ybb_E* 1bcc_E* 2bcc_E* ...
Probab=98.79 E-value=2e-09 Score=110.59 Aligned_cols=69 Identities=23% Similarity=0.378 Sum_probs=62.1
Q ss_pred hhhhhhhhhcCCCCCCCccccceeecCCEEEcCCCCceeecCCCccccCCCCCCCCeEEEEEEcCCEEEE
Q psy2951 973 FAERNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVV 1042 (1466)
Q Consensus 973 ~~~g~~~a~~~~C~h~g~~l~~g~~~~~~~~cp~h~~~f~~~~g~~~~~p~~~~l~~~~v~~~~~~~~~~ 1042 (1466)
..+++++++.+.|||.|++|..+..+.+.+.||||||+||+ +|++...|+..+|+.|++++.+++.+++
T Consensus 127 ~~~ge~~a~~~~CtH~G~~l~~~~~~~~~~~CP~HGs~FD~-~G~v~~gPa~~~L~~~p~~v~~d~~I~v 195 (196)
T 1pp9_E 127 VKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDA-SGRIRKGPAPLNLEVPSYEFTSDDMVIV 195 (196)
T ss_dssp CSSTTEEEEECCCTTTSCCCEETCSTTSSEEETTTTEEECT-TCCEEESSCCSCCCCCCEEEETTTEEEE
T ss_pred ccCCeEEEEECccCCCCeeccccCCCCCEEEeCCCCCEECC-CCCCccCCCCCCCcceeEEEEECCEEEE
Confidence 34789999999999999999988777789999999999998 9999999999999999999866777765
No 257
>1jm1_A Rieske iron-sulfur protein SOXF; electron transport, respiratory chain, oxidoreductase; 1.11A {Sulfolobus acidocaldarius} SCOP: b.33.1.1
Probab=98.79 E-value=3.6e-09 Score=109.55 Aligned_cols=70 Identities=20% Similarity=0.449 Sum_probs=61.1
Q ss_pred hhhhhhhcCCCCCCCccccceee-----------cCCEEEcCCCCceeecCCC-ccccCCCCCCCCeEEEEEEc-CCEEE
Q psy2951 975 ERNIYAVGTKCSHYGAPLVKGSL-----------GDGRVRCPWHGACFNIATG-DIEDFPGMDSLPCYKVTIQN-DDSVV 1041 (1466)
Q Consensus 975 ~g~~~a~~~~C~h~g~~l~~g~~-----------~~~~~~cp~h~~~f~~~~g-~~~~~p~~~~l~~~~v~~~~-~~~~~ 1041 (1466)
+|+++|+.+.|||.|++|..|.+ .++.+.||||||+||+.|| ++...|+..+|+.|++++++ ++.++
T Consensus 84 ~g~i~A~~n~CpH~G~~L~~g~~~p~~~~~~~~~~~~~i~CP~Hgs~FDl~tGG~v~~gPa~~~L~~~~v~v~~~~g~v~ 163 (204)
T 1jm1_A 84 NGTIFAFSDVCVHLGCQLPAQVIVSSESDPGLYAKGADLHCPCHGSIYALKDGGVVVSGPAPRPLPIVILDYDSSTGDIY 163 (204)
T ss_dssp TTCEEEEESBCTTTCCBCCTTEEESSTTSSEEETTTTEEECTTTCCEEEGGGTSEEEESSCCSCCCBEEEEECTTTCEEE
T ss_pred CCEEEEEeCcCCCCCcCccccccccccccccccCCCCEEECCCCCCEEeCCCCCeEecCCCCCCCCeEeeEEEecCCEEE
Confidence 57899999999999999998865 5789999999999999986 99988999999999999842 67777
Q ss_pred EEc
Q psy2951 1042 VQA 1044 (1466)
Q Consensus 1042 ~~~ 1044 (1466)
+..
T Consensus 164 v~g 166 (204)
T 1jm1_A 164 AVG 166 (204)
T ss_dssp EEE
T ss_pred EEe
Confidence 643
No 258
>3gke_A DDMC; rieske cluster, non-heme mononuclear iron, oxygenase, oxidoreductase; 1.75A {Stenotrophomonas maltophilia} PDB: 3gb4_A 3gl0_A* 3gl2_A* 3gob_A* 3gte_A 3gts_A*
Probab=98.75 E-value=3.9e-09 Score=121.68 Aligned_cols=83 Identities=22% Similarity=0.327 Sum_probs=68.9
Q ss_pred ecCchhhhhhhhhhhhhhcCCCCCCCccccceeecCCEEEcCCCCceeecCCCccccCCC-------CCCCCeEEEEEEc
Q psy2951 964 VGMDPLAAQFAERNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPG-------MDSLPCYKVTIQN 1036 (1466)
Q Consensus 964 ~g~~~~~~~~~~g~~~a~~~~C~h~g~~l~~g~~~~~~~~cp~h~~~f~~~~g~~~~~p~-------~~~l~~~~v~~~~ 1036 (1466)
.+...++.+..+|+++|+.+.|||.|++|..|.+.++.+.||||||+|++ +|+|...|. ...|+.|++++ .
T Consensus 28 ~g~~vvv~R~~~G~v~a~~n~CpHrg~~L~~G~~~~~~i~CpyHgw~fd~-~G~~~~~P~~~~~~~~~~~l~~~~v~~-~ 105 (349)
T 3gke_A 28 LDTPLALYRQPDGVVAALLDICPHRFAPLSDGILVNGHLQCPYHGLEFDG-GGQCVHNPHGNGARPASLNVRSFPVVE-R 105 (349)
T ss_dssp TTEEEEEEECTTSCEEEEESSCTTTCCCGGGCEEETTEEECTTTCCEECT-TCCEEECCSTTCCCCGGGCCCBCCEEE-E
T ss_pred CCEEEEEEEcCCCcEEEEeCcCCCCCcCCccCCccceEEEECCCCCEEcC-CCCccccCccccccccccccceeeEEE-E
Confidence 33333445556899999999999999999999999999999999999998 999998883 34689999998 6
Q ss_pred CCEEEEEcchhh
Q psy2951 1037 DDSVVVQARKDE 1048 (1466)
Q Consensus 1037 ~~~~~~~~~~~~ 1048 (1466)
+|.+++.....+
T Consensus 106 ~G~V~v~~~~~~ 117 (349)
T 3gke_A 106 DALIWIWPGDPA 117 (349)
T ss_dssp TTEEEECCSCGG
T ss_pred CCEEEEeeCCCC
Confidence 689999765443
No 259
>2qjy_C Ubiquinol-cytochrome C reductase iron-sulfur SUBU; cytochrome B, 8 TM helixces cytochrome C1, 1 C-TERM TM helix 1 N-TERM TM helix; HET: BGL HEM SMA LOP UQ2; 2.40A {Rhodobacter sphaeroides} PDB: 2fyn_C* 2qjk_C* 2qjp_C* 1zrt_E* 2yiu_C*
Probab=98.73 E-value=4.9e-09 Score=107.55 Aligned_cols=67 Identities=22% Similarity=0.425 Sum_probs=58.5
Q ss_pred hhhhhhhcCCCCCCCccccce-eecCCEEEcCCCCceeecCCCccccCCCCCCCCeEEEEEEcCCEEEE
Q psy2951 975 ERNIYAVGTKCSHYGAPLVKG-SLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVV 1042 (1466)
Q Consensus 975 ~g~~~a~~~~C~h~g~~l~~g-~~~~~~~~cp~h~~~f~~~~g~~~~~p~~~~l~~~~v~~~~~~~~~~ 1042 (1466)
+|+++|+.+.|||.|++|..+ .-..+.+.||||||+||+ +|++...|+..+|+.|+++++.++.+++
T Consensus 119 ~g~~~a~~~~C~H~G~~l~~~~~g~~~~~~CP~Hg~~Fd~-~G~~~~gPa~~~L~~~~~~v~~d~~i~i 186 (187)
T 2qjy_C 119 AGEWLVMWGVCTHLGCSPIGGVSGDFGGWFCPCHGSHYDS-AGRIRKGPAPENLPIPLAKFIDETTIQL 186 (187)
T ss_dssp TCCEEEEECCCTTTSCCCEEEEETTTTEEEETTTTEEECT-TSCEEESSCCSCCCBCSEEEEETTEEEE
T ss_pred CCeEEEEeCccCCCCeECccCcCCCcCEEEeCCCCCEECC-CCeEeCCCCCCCCceEEEEEEeCCEEEE
Confidence 688999999999999999874 222389999999999998 7999999999999999999966777765
No 260
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.69 E-value=2e-09 Score=130.56 Aligned_cols=94 Identities=13% Similarity=0.139 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEccc--------cccCccccccCCce-e
Q psy2951 776 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIG--------TVLNTNYLDGKGVE-L 846 (1466)
Q Consensus 776 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G--------~~p~~~~~~~~gl~-~ 846 (1466)
..+...+...+++.| +++++++|++|+.. ++.+ .|.+.+|+++.+|.||+|+| +.|+.+..+...+. +
T Consensus 204 ~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~-~~~v-~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~ 280 (431)
T 3k7m_X 204 NGSADLVDAMSQEIP-EIRLQTVVTGIDQS-GDVV-NVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEG 280 (431)
T ss_dssp TCTHHHHHHHHTTCS-CEESSCCEEEEECS-SSSE-EEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHC
T ss_pred CcHHHHHHHHHhhCC-ceEeCCEEEEEEEc-CCeE-EEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhC
Confidence 344555666667778 99999999999844 3334 57888888899999999999 88876532211111 1
Q ss_pred eCCCcEEeCCCCCCCCCCeEEecccc
Q psy2951 847 NGQKAVVVNEYLETNVPGVYAGGDIA 872 (1466)
Q Consensus 847 ~~~G~i~vd~~~~t~~~~iya~GD~~ 872 (1466)
.....++++..++|+.+++|+.||+.
T Consensus 281 ~~~~~~kv~~~~~~~~~~i~~~~d~~ 306 (431)
T 3k7m_X 281 HGGQGLKILIHVRGAEAGIECVGDGI 306 (431)
T ss_dssp CCCCEEEEEEEEESCCTTEEEEBSSS
T ss_pred CCcceEEEEEEECCCCcCceEcCCCC
Confidence 12234889999999999999999863
No 261
>3gcf_A Terminal oxygenase component of carbazole 1,9A- dioxygenase; rieske oxygenase, 2Fe-2S, electron transfer, oxidoreductase; 2.30A {Nocardioides aromaticivorans}
Probab=98.69 E-value=7e-09 Score=117.52 Aligned_cols=81 Identities=25% Similarity=0.472 Sum_probs=66.0
Q ss_pred EeecCchhhhhhhhhhhhhhcCCCCCCCcccccee--ecCCEEEcCCCCceeecCCCccccCCC--------CCCCCeEE
Q psy2951 962 LTVGMDPLAAQFAERNIYAVGTKCSHYGAPLVKGS--LGDGRVRCPWHGACFNIATGDIEDFPG--------MDSLPCYK 1031 (1466)
Q Consensus 962 ~~~g~~~~~~~~~~g~~~a~~~~C~h~g~~l~~g~--~~~~~~~cp~h~~~f~~~~g~~~~~p~--------~~~l~~~~ 1031 (1466)
.+.+...++.+ .+|+++|+.+.|||.|++|..|. ..++.+.||||||+|++.+|+|...|+ ..+|+.|+
T Consensus 53 ~i~G~~VvV~R-~dG~v~A~~N~CpHRGa~Ls~G~~~~~~~~I~CPyHGW~Fdl~dG~cv~iP~~p~~~~~~~~~L~~yp 131 (394)
T 3gcf_A 53 TMLGEKVLLTR-AKGEVKAIADGCAHRGVPFSKEPLCFKAGTVSCWYHGWTYDLDDGRLVDVLTSPGSPVIGKIGIKVYP 131 (394)
T ss_dssp EETTEEEEEEE-ETTEEEEEESSCTTTCCCGGGSCBCSSTTEEECTTTCEEEETTTCBEEEETTSTTCTTTTSCBCCEEC
T ss_pred EECCEEEEEEE-eCCeEEEeeCcCCCCCCCCcCCcccCcCCEEECCCCCcEEECCCCceeccCCCcccccccccCceEEE
Confidence 33343434445 58999999999999999999987 357899999999999998999987553 34699999
Q ss_pred EEEEcCCEEEEEc
Q psy2951 1032 VTIQNDDSVVVQA 1044 (1466)
Q Consensus 1032 v~~~~~~~~~~~~ 1044 (1466)
+++ .+|.+++..
T Consensus 132 V~e-~~G~VfV~l 143 (394)
T 3gcf_A 132 VQV-AQGVVFVFI 143 (394)
T ss_dssp EEE-ETTEEEEEE
T ss_pred EEE-ECCcEEEec
Confidence 998 788888875
No 262
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.68 E-value=1e-07 Score=116.07 Aligned_cols=149 Identities=9% Similarity=0.117 Sum_probs=88.5
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCc----------cchhc---c-----------c----
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK----------LSKQL---D-----------I---- 93 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~~~~----------~~~~~---~-----------~---- 93 (1466)
..+||+|||||+||++||..|++.|.++.|++...... ....+. +...+ . .
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~i-G~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~ 104 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTI-GQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKM 104 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGT-TCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEeccccc-CCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceee
Confidence 35899999999999999999999999988876542111 000000 00000 0 0
Q ss_pred ----------------CcccccccChhhhhc-CCeEEEeCceEEEeccccc-cEEEecCCcEEecCEEEEccCCCCCCCC
Q psy2951 94 ----------------KADSILLRTEEFYKD-NDIHVIKGKKIISDSELNE-KKIKLQDGTSIDFTKIYLATGSSPRTIS 155 (1466)
Q Consensus 94 ----------------~~~~~~~~~~~~~~~-~~v~~~~~~~v~~~~~~~~-~~v~~~~~~~~~~d~lviAtG~~~~~~~ 155 (1466)
+...+...+.+.+++ .+++++.+.......+.+. ..|.+.+|..+.+|.||+|||+.+..+.
T Consensus 105 l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~~ 184 (637)
T 2zxi_A 105 LNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGVI 184 (637)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTCEE
T ss_pred cccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccCce
Confidence 000112223344555 5899966543322222222 2467778889999999999999776432
Q ss_pred CCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEee
Q psy2951 156 QADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGR 213 (1466)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~ 213 (1466)
+++... + ..+ + + |+.+++++|..|.++|.+++.+..
T Consensus 185 -~~G~~~-~---------------~~G-r---~-G~~~A~~la~~L~~lG~~v~~l~t 220 (637)
T 2zxi_A 185 -YIGDKM-I---------------PGG-R---L-GEPRSEGLSDFYRRFDFPLIRFKT 220 (637)
T ss_dssp -EETTEE-E---------------ECS-B---T-TBCCBCTHHHHHHHTTCCCEEEEE
T ss_pred -ecccee-c---------------CCC-C---C-CchhHHHHHHHHHhcCCceEEecC
Confidence 222211 0 012 2 2 356789999999999988766643
No 263
>2zyl_A Possible oxidoreductase; KSHA, cholesterol, rieske; 2.30A {Mycobacterium tuberculosis}
Probab=98.66 E-value=1.1e-08 Score=119.37 Aligned_cols=85 Identities=15% Similarity=0.291 Sum_probs=69.8
Q ss_pred EEEEeecCchhhhhhhhhhhhhhcCCCCCCCccccceeecCCEEEcCCCCceeecCCCccccCCCC------CCCCeEEE
Q psy2951 959 LAILTVGMDPLAAQFAERNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGM------DSLPCYKV 1032 (1466)
Q Consensus 959 ~g~~~~g~~~~~~~~~~g~~~a~~~~C~h~g~~l~~g~~~~~~~~cp~h~~~f~~~~g~~~~~p~~------~~l~~~~v 1032 (1466)
..+.+.|...++.+..+|+++|+.+.|||.|++|..|.+.++.+.||||||+|++ +|+|...|.. ..|+.|++
T Consensus 41 ~~~~~~g~~vvl~R~~~G~v~a~~n~CpHrga~L~~g~~~~~~i~CpyHgw~f~~-~G~~~~~P~~~~~~~~~~l~~~~v 119 (386)
T 2zyl_A 41 HGVEAFGTKLVVFADSHGDLKVLDGYCRHMGGDLSEGTVKGDEVACPFHDWRWGG-DGRCKLVPYARRTPRMARTRSWTT 119 (386)
T ss_dssp EEEEETTEEEEEEECTTSCEEEEESBCTTTCCBGGGSEEETTEEECTTTCCEEET-TSBEEECTTCSSCCTTCBCCEECE
T ss_pred EEEEECCeEEEEEECCCCCEEEEcCcCCCCCCCCCCCcccCCEEEeCCCCCEECC-CCCccccCcccccCcccCcceEeE
Confidence 3334444444455556899999999999999999999999999999999999997 9999988863 46899999
Q ss_pred EEEcCCEEEEEcc
Q psy2951 1033 TIQNDDSVVVQAR 1045 (1466)
Q Consensus 1033 ~~~~~~~~~~~~~ 1045 (1466)
++ .+|.+++...
T Consensus 120 ~~-~~G~v~v~~~ 131 (386)
T 2zyl_A 120 DV-RSGLLFVWHD 131 (386)
T ss_dssp EE-ETTEEEEEEC
T ss_pred EE-ECCEEEEEEC
Confidence 98 7888888654
No 264
>3gkq_A Terminal oxygenase component of carbazole 1,9A- dioxygenase; rieske nonheme iron oxygenase, electron transfer, putidaredoxin-type ferredoxin; 2.10A {Sphingomonas}
Probab=98.66 E-value=7.4e-09 Score=116.85 Aligned_cols=73 Identities=19% Similarity=0.371 Sum_probs=62.7
Q ss_pred hhhhhhhhhhhhcCCCCCCCcccccee--ecCCEEEcCCCCceeecCCCccccCCC--------CCCCCeEEEEEEcCCE
Q psy2951 970 AAQFAERNIYAVGTKCSHYGAPLVKGS--LGDGRVRCPWHGACFNIATGDIEDFPG--------MDSLPCYKVTIQNDDS 1039 (1466)
Q Consensus 970 ~~~~~~g~~~a~~~~C~h~g~~l~~g~--~~~~~~~cp~h~~~f~~~~g~~~~~p~--------~~~l~~~~v~~~~~~~ 1039 (1466)
+.+ .+|+++|+.+.|||.|++|..|. ..++.+.||||||+|++.+|+|...|+ ..+|+.|++++ .+|.
T Consensus 58 V~R-~dG~v~A~~N~CpHRGa~Ls~G~~~~~~~~I~CPyHGW~Fdl~dG~cv~iP~~P~~~~~~~~~L~~ypV~e-~~G~ 135 (389)
T 3gkq_A 58 LNR-VDGVVHAIADRCLHRGVTLSDKVECYSKATISCWYHGWTYRWDNGKLVDILTNPTSVQIGRHALKTYPVRE-EKGL 135 (389)
T ss_dssp EEE-ETTEEEEEESSCTTTCCCGGGGCCCSBTTEEECTTTCEEEETTTCBEEEETTCTTCTTTTSCBCCBCCEEE-ETTE
T ss_pred EEE-eCCeEEEeCCcCCCCCCCccCCcccCcCCEEECCCCCCEEECCCCCeecccCCcccccccccCCcEEEEEE-ECCe
Confidence 344 58899999999999999999987 468999999999999998999987543 34699999998 7888
Q ss_pred EEEEc
Q psy2951 1040 VVVQA 1044 (1466)
Q Consensus 1040 ~~~~~ 1044 (1466)
+++..
T Consensus 136 VfV~l 140 (389)
T 3gkq_A 136 VFLFV 140 (389)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 88876
No 265
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.65 E-value=4.4e-08 Score=119.84 Aligned_cols=147 Identities=11% Similarity=0.083 Sum_probs=91.5
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCC-CCCCCCCccch----------hc---c---------------
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN-FLPYDRVKLSK----------QL---D--------------- 644 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~-~~~~~~~~~~~----------~~---~--------------- 644 (1466)
..+||+|||||+||++||..|++.|.+ |+++|+.. .++...+.... .+ .
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~k--VlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~ 104 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQ--TLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFR 104 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCC--EEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCC--EEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchh
Confidence 358999999999999999999999988 77787763 11111110000 00 0
Q ss_pred ----------------cCcccccccCHhHhhh-CCcEEEEceEEEEeccccc--cEEEccCCCEEecCEEEEcCCCCCCc
Q psy2951 645 ----------------IKADSILLRTEEFYKD-NDIHVIKGKKIISDSELNE--KKIKLQDGTSIDFTKIYLATGSSPRT 705 (1466)
Q Consensus 645 ----------------~~~~~~~~~~~~~~~~-~gv~~~~~~~v~~i~~~~~--~~v~~~~~~~~~~d~lviAtG~~~~~ 705 (1466)
.+...+...+.+.+++ .|++++. ++|..+...+. ..|.+.+|.++.+|+||+|||+.+..
T Consensus 105 ~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~-~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~ 183 (651)
T 3ces_A 105 ILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQ-QAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDG 183 (651)
T ss_dssp EESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCC
T ss_pred hhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEE-EEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccC
Confidence 0000112223344555 5999965 45888722222 24666778889999999999998887
Q ss_pred CCCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEee
Q psy2951 706 ISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGR 765 (1466)
Q Consensus 706 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~ 765 (1466)
+.++ |.... .+++ +| |.+++++|..|++.|.+|+.+..
T Consensus 184 ~~i~-G~~~~-----------------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~t 221 (651)
T 3ces_A 184 KIHI-GLDNY-----------------SGGR---AG-DPPSIPLSRRLRELPLRVGRLKT 221 (651)
T ss_dssp EEEC-C----------------------------------CCHHHHHHHTTTCCEEEECC
T ss_pred cccc-CcccC-----------------CCCC---cc-chhhhHHHHHHHhcCCeEEEecC
Confidence 7777 65410 0223 56 78999999999999999998853
No 266
>1vf5_D Rieske iron-sulfur protein; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: b.33.1.1 f.23.12.1 PDB: 2d2c_D* 2e74_D* 2e75_D* 2e76_D* 2zt9_D*
Probab=98.65 E-value=3.2e-09 Score=108.81 Aligned_cols=70 Identities=26% Similarity=0.538 Sum_probs=60.4
Q ss_pred hhhhhhh--hhhcCCCCCCCccccceeecCCEEEcCCCCceeecCCCccccCCCCCCCCeEEEEEEcCCEEEEEc
Q psy2951 972 QFAERNI--YAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVVQA 1044 (1466)
Q Consensus 972 ~~~~g~~--~a~~~~C~h~g~~l~~g~~~~~~~~cp~h~~~f~~~~g~~~~~p~~~~l~~~~v~~~~~~~~~~~~ 1044 (1466)
+..+|++ +|+.+.|||.|++|..+. .++.+.|||||++||. +|++...|+..+|+.|++++ +++.+++..
T Consensus 93 ~~~~g~~~~~a~~~~CtH~G~~l~~~~-~~~~~~CP~Hgs~Fd~-~G~~~~gPa~~~L~~~~v~v-~~g~v~v~~ 164 (179)
T 1vf5_D 93 VESKEAIRDYGINAVCTHLGCVVPWNA-AENKFKCPCHGSQYDE-TGRVIRGPAPLSLALCHATV-QDDNIVLTP 164 (179)
T ss_dssp BCTTCCBCSCCCBCBCTTTSCBCCBCS-SSSSEECTTTCCEECS-SSCCCSSSCCSCCBCCCCCC-SSSSCCCCC
T ss_pred EECCCcEEEEEEeCccCCCCCCCcccC-CCCEEECCCCCCEECC-CCcEecCCCCCCCCeEEEEE-ECCEEEEEe
Confidence 3446665 999999999999998876 5688999999999996 99999999999999999998 677777753
No 267
>3cx5_E Cytochrome B-C1 complex subunit rieske, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: b.33.1.1 f.23.12.1 PDB: 1kb9_E* 1kyo_E* 1p84_E* 2ibz_E* 1ezv_E* 3cxh_E*
Probab=98.62 E-value=1.7e-08 Score=103.13 Aligned_cols=66 Identities=24% Similarity=0.389 Sum_probs=55.8
Q ss_pred hhhhhhhcCCCCCCCccccceeecCCEEEcCCCCceeecCCCccccCCCCCCCCeEEEEEEcCCEEEE
Q psy2951 975 ERNIYAVGTKCSHYGAPLVKGSLGDGRVRCPWHGACFNIATGDIEDFPGMDSLPCYKVTIQNDDSVVV 1042 (1466)
Q Consensus 975 ~g~~~a~~~~C~h~g~~l~~g~~~~~~~~cp~h~~~f~~~~g~~~~~p~~~~l~~~~v~~~~~~~~~~ 1042 (1466)
+++++++.+.|||.|+.+..+.-.++.+.||||||+||+ +|++...|+..+|+.+++++ +++.+++
T Consensus 119 ~g~~~a~~~iCtHlGc~p~~~~~~~~~~~CPcHGs~FD~-~G~v~~gPa~~~L~v~p~~v-~~~~I~v 184 (185)
T 3cx5_E 119 DPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDI-SGRIRKGPAPLNLEIPAYEF-DGDKVIV 184 (185)
T ss_dssp STTEEEEECCCTTTSCCCEEEETTTTEEEETTTTEEECT-TCCEEESSCCSCCCCCCEEE-ETTEEEE
T ss_pred CCeEEEEecccCCCCceeccCCCCCCEEEcCCCCCEECC-CCCEecCCCCCCcceEEEEE-ECCEEEE
Confidence 689999999999999954433335689999999999998 99999999988998888888 6777765
No 268
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.62 E-value=1.5e-09 Score=131.82 Aligned_cols=95 Identities=12% Similarity=0.143 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeec--------cccCccccccCCcee-
Q psy2951 1247 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIG--------TVLNTNYLDGKGVEL- 1317 (1466)
Q Consensus 1247 ~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G--------~~p~~~~~~~~gl~~- 1317 (1466)
..+...+.+++++.| +++++++|++|+ .+++. ..|.+.+|+++.||.||+|+| ..|+.+.+....+..
T Consensus 204 ~g~~~l~~~~~~~~g-~i~~~~~V~~i~-~~~~~-v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~ 280 (431)
T 3k7m_X 204 NGSADLVDAMSQEIP-EIRLQTVVTGID-QSGDV-VNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEG 280 (431)
T ss_dssp TCTHHHHHHHHTTCS-CEESSCCEEEEE-CSSSS-EEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHC
T ss_pred CcHHHHHHHHHhhCC-ceEeCCEEEEEE-EcCCe-EEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhC
Confidence 335566666777778 999999999998 34434 458888998899999999999 778766322111111
Q ss_pred eCCCeEEeCCCccccCCCEEEeccccc
Q psy2951 1318 NGQKAVVVNEYLETNVPGVYAGGDIAY 1344 (1466)
Q Consensus 1318 ~~~G~i~vd~~~~t~~~~v~a~GD~a~ 1344 (1466)
.....+.|+..++++.++||+.||+..
T Consensus 281 ~~~~~~kv~~~~~~~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 281 HGGQGLKILIHVRGAEAGIECVGDGIF 307 (431)
T ss_dssp CCCCEEEEEEEEESCCTTEEEEBSSSS
T ss_pred CCcceEEEEEEECCCCcCceEcCCCCE
Confidence 122358999999999999999999743
No 269
>3vca_A Ring-hydroxylating dioxygenase; rieske-type, mononuclear non-heme iron, N-demethylase, oxido; 1.59A {Sinorhizobium meliloti} PDB: 3vcp_A
Probab=98.61 E-value=2.5e-08 Score=116.36 Aligned_cols=83 Identities=13% Similarity=0.209 Sum_probs=68.5
Q ss_pred EeecCchhhhhhhhhhhhhhcCCCCCCCcccc-ceeecCCEEEcCCCCceeecCCCccccCCCC--------CCCCeEEE
Q psy2951 962 LTVGMDPLAAQFAERNIYAVGTKCSHYGAPLV-KGSLGDGRVRCPWHGACFNIATGDIEDFPGM--------DSLPCYKV 1032 (1466)
Q Consensus 962 ~~~g~~~~~~~~~~g~~~a~~~~C~h~g~~l~-~g~~~~~~~~cp~h~~~f~~~~g~~~~~p~~--------~~l~~~~v 1032 (1466)
.+.+...++.+..+|+++|+.+.|||.|++|. .|...++.+.||||||+|++ +|+++..|+. .+|+.|++
T Consensus 63 ~i~g~~vvv~R~~dG~v~A~~n~CpHrga~L~~~g~~~~~~i~CPyHgw~fdl-dG~~~~~P~~~~~~~~~~~~L~~~~v 141 (412)
T 3vca_A 63 RVGAYEVVIVRSRDGEVRAFHNSCRHRGSLICKARQGQVAKLVCPYHQWTYEL-DGKLIWANDMGPDFDASKYGLKPVNL 141 (412)
T ss_dssp EETTEEEEEEECTTSCEEEEESSCTTTCCCSCCSSEEECSSEECTTTCCEECT-TSCEEECTTCCTTCCGGGCSCCEEEE
T ss_pred EECCEEEEEEEcCCCCEEEecccCCCCCCEeecccccCCCEEEcCCCCCEEcC-CCccccCCccccccCcccCCCcEEEE
Confidence 33344444455568999999999999999998 78888999999999999997 9999988864 35999999
Q ss_pred EEEcCCEEEEEcch
Q psy2951 1033 TIQNDDSVVVQARK 1046 (1466)
Q Consensus 1033 ~~~~~~~~~~~~~~ 1046 (1466)
++ .+|.+++....
T Consensus 142 ~~-~~G~V~v~~~~ 154 (412)
T 3vca_A 142 RN-LDGLIYICLSD 154 (412)
T ss_dssp EE-ETTEEEEECSS
T ss_pred EE-ECCEEEEEecC
Confidence 98 78899987643
No 270
>3n0q_A Putative aromatic-ring hydroxylating dioxygenase; rieske [2Fe-2S] domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.80A {Ruegeria SP}
Probab=98.57 E-value=3.6e-08 Score=114.98 Aligned_cols=84 Identities=15% Similarity=0.222 Sum_probs=68.9
Q ss_pred EEeecCchhhhhhhhhhhhhhcCCCCCCCccccc-eeecCCEEEcCCCCceeecCCCccccCCCC--------CCCCeEE
Q psy2951 961 ILTVGMDPLAAQFAERNIYAVGTKCSHYGAPLVK-GSLGDGRVRCPWHGACFNIATGDIEDFPGM--------DSLPCYK 1031 (1466)
Q Consensus 961 ~~~~g~~~~~~~~~~g~~~a~~~~C~h~g~~l~~-g~~~~~~~~cp~h~~~f~~~~g~~~~~p~~--------~~l~~~~ 1031 (1466)
+.+.+...++.+..+|+++|+.+.|||.|++|.. |...++.+.||||||+|++ +|++...|.. .+|+.|+
T Consensus 60 ~~i~g~~vvv~R~~dG~v~A~~n~C~Hrga~L~~~g~~~~~~i~CpyHgw~fd~-dG~~~~~P~~~~~~~~~~~~L~~~~ 138 (409)
T 3n0q_A 60 HQVGNYNVIIVRGADNVIRAFHNACRHRGSVICKAKKGNNPKLVCPYHQWTYEL-DGRLLWARDMGPDFEPSRHGLKTVH 138 (409)
T ss_dssp EEETTEEEEEEECTTSCEEEEESCCTTTCCCSCCSSEEECSSEECTTTCCEECT-TSCEEECTTCCTTCCGGGCSCCEEE
T ss_pred EEECCEEEEEEEcCCCCEEeecCcCCcCcCCccCcCccCCCEEEECCCCCEEeC-CCCcccCCcCCcccCcccCCCceEE
Confidence 3333444445555689999999999999999986 8888899999999999997 9999988864 3699999
Q ss_pred EEEEcCCEEEEEcch
Q psy2951 1032 VTIQNDDSVVVQARK 1046 (1466)
Q Consensus 1032 v~~~~~~~~~~~~~~ 1046 (1466)
+++ .+|.+++....
T Consensus 139 v~~-~~G~Vfv~~~~ 152 (409)
T 3n0q_A 139 CRE-LAGLIYICLAD 152 (409)
T ss_dssp EEE-ETTEEEEECSS
T ss_pred EEE-ECCEEEEEeCC
Confidence 998 78899997643
No 271
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.54 E-value=4.9e-10 Score=140.31 Aligned_cols=242 Identities=14% Similarity=0.155 Sum_probs=120.8
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCC-CCCCCCchhhc---cCcccccccChhhhccCCcEEEcCCe
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLP-YDRVKLSKQLD---IKADSILLRTEEFYKDNDIHVIKGKK 1141 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~-~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~ 1141 (1466)
..+|||||||+||+++|..|++.|. +|+|||+++..+ +.++..++... ...+.+.......+...++.+..++.
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~--~V~liE~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~l~~~~~ 123 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGY--KVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTLVV 123 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSCCCSSSSTTCCTTCSHHHHHSGGGTHHHHHHTCEESCCCCCCCCC
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCC--cEEEEeccCCCCCcccccccccccCCCccHHHHHHHHHHhhhhcccccccccc
Confidence 4689999999999999999999999 999999998776 44444444332 11222222222223333333333332
Q ss_pred EEEee-cCCCCeEEecCCcE---EecCeE-------------EEecCCCCCcCCCCCCCCcEEEecCHH--HHHhhhccc
Q psy2951 1142 IISDS-ELNEKKIKLQDGTS---IDFTKI-------------YLATGSSPRTISQADGVNKVFYLRTVE--DANNIAPHI 1202 (1466)
Q Consensus 1142 v~~i~-d~~~~~v~~~~g~~---~~yd~l-------------vlAtG~~~~~~~~~~g~~~v~~~~~~~--~~~~l~~~~ 1202 (1466)
++... +.....+.+.++.. ..|+.+ +..+|..++..+.. ....+++.. ++..+...+
T Consensus 124 ~~~~~~~~~~~~v~l~~g~~~~~~~~~~l~~~~~~~~vGG~~~~~~g~~~r~~~~e----~~~~l~~~~v~~~~~l~~~~ 199 (623)
T 3pl8_A 124 DTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTAWTCATPRFDREQ----RPLLVKDDADADDAEWDRLY 199 (623)
T ss_dssp CCSCTTSCCCSSCCSCTTCCTTCCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGG----SCCSSTTCHHHHHHHHHHHH
T ss_pred ccccccccccCcEEeccCCCcccccchhhhhhcccccccCcceeeccccccCChHH----hhhhhcccCccChhhHHHHH
Confidence 21110 11112233333211 224433 22234444444322 112222111 123333322
Q ss_pred CCCCeEEEEcCCHHHHH-----HHH----HHhc-CCC---eEEEEcCCCcCCcccccHHHHHHHHHH------HHhCCcE
Q psy2951 1203 TPESNVVVIGSSFIGME-----AAA----FCAS-KVK---SVTVVGRGAVPFQESLGKEVGERITKL------FESKGVK 1263 (1466)
Q Consensus 1203 ~~~~~vvVvG~g~~g~e-----~a~----~l~~-~g~---~v~vv~~~~~~~~~~~~~~~~~~l~~~------~~~~gv~ 1263 (1466)
....+++.+|++....+ ... .+.. ... ........+ ... .++. ....+... +++.||+
T Consensus 200 ~~~~~l~~vgg~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~a~~~~~~-~~~-r~s~-~~~~l~~~~~l~~~~~~~nv~ 276 (623)
T 3pl8_A 200 TKAESYFQTGTDQFKESIRHNLVLNKLTEEYKGQRDFQQIPLAATRRSP-TFV-EWSS-ANTVFDLQNRPNTDAPEERFN 276 (623)
T ss_dssp HHHHHHHTEESCTTTTCHHHHHHHHHHHHHTTTTSCCEECCEEEEEEET-TEE-EECC-HHHHCCCCCEEETTEEEEEEE
T ss_pred HHHHHhcccccccccCccccccchHHHHHhhhhcccccccchhhccCCC-Ccc-ccch-HHhhhhhhhcchhhccCCCEE
Confidence 22334445565542211 111 1111 111 011111010 000 1111 12222222 3445899
Q ss_pred EEcCceEEEEEecC-CCcEEEEEcC---CCC--eeecCEEEEeeccccCccccccCCce
Q psy2951 1264 FVMKANVSSFEKNE-KNDVTAANLD---NGT--TIPADLVIVGIGTVLNTNYLDGKGVE 1316 (1466)
Q Consensus 1264 ~~~~~~v~~i~~~~-~g~~~~v~l~---~g~--~i~~D~vv~a~G~~p~~~~~~~~gl~ 1316 (1466)
+++++.|+++...+ ++++.+|++. +|+ +++||.||+|+|..|+..+|..+|+.
T Consensus 277 v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG 335 (623)
T 3pl8_A 277 LFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFG 335 (623)
T ss_dssp EECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSS
T ss_pred EEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCC
Confidence 99999999998322 2367778774 454 68999999999999999888777663
No 272
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.52 E-value=4.4e-08 Score=119.89 Aligned_cols=146 Identities=14% Similarity=0.100 Sum_probs=107.1
Q ss_pred ecCeEEEecCCCCCcCCCCCCCC--cEEEecCHHHHHhh---------hcc--cCCCCeEEEEcCCHHHHHHHHHHhcCC
Q psy2951 1162 DFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNI---------APH--ITPESNVVVIGSSFIGMEAAAFCASKV 1228 (1466)
Q Consensus 1162 ~yd~lvlAtG~~~~~~~~~~g~~--~v~~~~~~~~~~~l---------~~~--~~~~~~vvVvG~g~~g~e~a~~l~~~g 1228 (1466)
.||.+++++|++|+.++++ +.+ +++......+..++ ... .....+|+|||+|++|+.+|..|++.|
T Consensus 37 ~~~~l~~~~g~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~~G 115 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQ-YHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELALLG 115 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHH-HHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCCCcEe-ehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHHCC
Confidence 4788999999998776665 433 44555556666555 212 234679999999999999999999999
Q ss_pred CeEEEEcCCCcCCcc--------------cc------------------cHHHHHHHHHHHHhCCcEEEcCceEEEEEec
Q psy2951 1229 KSVTVVGRGAVPFQE--------------SL------------------GKEVGERITKLFESKGVKFVMKANVSSFEKN 1276 (1466)
Q Consensus 1229 ~~v~vv~~~~~~~~~--------------~~------------------~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~ 1276 (1466)
.+|+++++.+.+... .+ ...+.+.|.+.+++.||+++++++|++++..
T Consensus 116 ~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~ 195 (497)
T 2bry_A 116 ARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPP 195 (497)
T ss_dssp CEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECC
T ss_pred CeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEe
Confidence 999999987643100 00 1456677888888899999999999999832
Q ss_pred -CCCcEEEEEc--C-CC--CeeecCEEEEeeccccCcc
Q psy2951 1277 -EKNDVTAANL--D-NG--TTIPADLVIVGIGTVLNTN 1308 (1466)
Q Consensus 1277 -~~g~~~~v~l--~-~g--~~i~~D~vv~a~G~~p~~~ 1308 (1466)
+++....|.+ . +| .++.+|.||+|+|..+...
T Consensus 196 ~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 196 PRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPE 233 (497)
T ss_dssp CSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCT
T ss_pred cCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccc
Confidence 1233445665 4 66 5789999999999988654
No 273
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.51 E-value=1.4e-07 Score=115.49 Aligned_cols=149 Identities=12% Similarity=0.058 Sum_probs=86.3
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCc----------cchhc---c-----------c----
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK----------LSKQL---D-----------I---- 93 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~~~~----------~~~~~---~-----------~---- 93 (1466)
.++||+|||||+||++||..|++.|.++.|++...... ....+. +...+ . .
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~i-G~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~ 105 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTL-GQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRI 105 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGT-TCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeeccccc-ccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhh
Confidence 46899999999999999999999999988876542111 000000 00000 0 0
Q ss_pred ----------------CcccccccChhhhhc-CCeEEEeCceEEEeccccc-cEEEecCCcEEecCEEEEccCCCCCCCC
Q psy2951 94 ----------------KADSILLRTEEFYKD-NDIHVIKGKKIISDSELNE-KKIKLQDGTSIDFTKIYLATGSSPRTIS 155 (1466)
Q Consensus 94 ----------------~~~~~~~~~~~~~~~-~~v~~~~~~~v~~~~~~~~-~~v~~~~~~~~~~d~lviAtG~~~~~~~ 155 (1466)
+...+...+.+.+++ .+++++.+.......+.+. ..|.+.+|..+.+|.||+|||+.+..+.
T Consensus 106 l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~~ 185 (651)
T 3ces_A 106 LNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKI 185 (651)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCCEE
T ss_pred hhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccCcc
Confidence 000111223344555 6899966543322222222 2466777888999999999999876432
Q ss_pred CCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEee
Q psy2951 156 QADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGR 213 (1466)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~~ 213 (1466)
+++... . .++ + +| |.+++++|..|.++|.+|+.+..
T Consensus 186 -i~G~~~------~----------~~g-r---iG-g~~a~eLA~~L~~lG~~v~~~~t 221 (651)
T 3ces_A 186 -HIGLDN------Y----------SGG-R---AG-DPPSIPLSRRLRELPLRVGRLKT 221 (651)
T ss_dssp -ECC----------------------------------CCHHHHHHHTTTCCEEEECC
T ss_pred -ccCccc------C----------CCC-C---cc-chhhhHHHHHHHhcCCeEEEecC
Confidence 222211 0 022 3 56 78899999999999999988853
No 274
>2de6_A Terminal oxygenase component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Janthinobacterium} SCOP: b.33.1.2 d.129.3.3 PDB: 1ww9_A 2de5_A 2de7_A*
Probab=98.46 E-value=5.6e-08 Score=114.34 Aligned_cols=81 Identities=19% Similarity=0.335 Sum_probs=65.3
Q ss_pred eecCchhhhhhhhhhhhhhcCCCCCCCccccceee--cCCEEEcCCCCceeecCCCccccCCC--------CCCCCeEEE
Q psy2951 963 TVGMDPLAAQFAERNIYAVGTKCSHYGAPLVKGSL--GDGRVRCPWHGACFNIATGDIEDFPG--------MDSLPCYKV 1032 (1466)
Q Consensus 963 ~~g~~~~~~~~~~g~~~a~~~~C~h~g~~l~~g~~--~~~~~~cp~h~~~f~~~~g~~~~~p~--------~~~l~~~~v 1032 (1466)
+.+...++.+ .+|+++|+.+.|||.|++|..|.+ .++.+.||||||+|++.+|+|...|. ...|+.|++
T Consensus 48 ~~g~~vvl~R-~~G~v~a~~n~CpHrga~L~~g~~~~~~~~i~CpyHgw~f~~~~G~~~~~p~~p~~~~~~~~~l~~~~v 126 (392)
T 2de6_A 48 LLGENLLVNR-IDGKLYCLKDRCLHRGVQLSVKVECKTKSTITCWYHAWTYRWEDGVLCDILTNPTSAQIGRQKLKTYPV 126 (392)
T ss_dssp ETTEEEEEEE-ETTEEEEEESSCTTTCCCGGGGCCCCSTTEEECTTTCEEEETTTCBEEEETTCTTCTTTTSCBCCBCCE
T ss_pred ECCEEEEEEE-eCCEEEEEeCcCCCCCCCCcCCcccCCCCEEEeCCCCCEEcCCCCccccccCCccccccccCCCceEeE
Confidence 3333334455 478999999999999999999986 36899999999999988999987543 246899999
Q ss_pred EEEcCCEEEEEcc
Q psy2951 1033 TIQNDDSVVVQAR 1045 (1466)
Q Consensus 1033 ~~~~~~~~~~~~~ 1045 (1466)
++ .+|.+++...
T Consensus 127 ~~-~~G~v~v~~~ 138 (392)
T 2de6_A 127 QE-AKGCVFIYLG 138 (392)
T ss_dssp EE-ETTEEEEEES
T ss_pred EE-ECCEEEEEeC
Confidence 98 7888888753
No 275
>1z01_A 2-OXO-1,2-dihydroquinoline 8-monooxygenase, oxygenase component; rieske center, oxygen binding/activation, substrate bound complex; 1.80A {Pseudomonas putida} SCOP: b.33.1.2 d.129.3.3 PDB: 1z02_A 1z03_A*
Probab=98.45 E-value=7.7e-08 Score=114.85 Aligned_cols=82 Identities=20% Similarity=0.411 Sum_probs=65.8
Q ss_pred EeecCchhhhhhhhhhhhhhcCCCCCCCccccceee--cCCEEEcCCCCceeecCCCccccCCC--------CCCCCeEE
Q psy2951 962 LTVGMDPLAAQFAERNIYAVGTKCSHYGAPLVKGSL--GDGRVRCPWHGACFNIATGDIEDFPG--------MDSLPCYK 1031 (1466)
Q Consensus 962 ~~~g~~~~~~~~~~g~~~a~~~~C~h~g~~l~~g~~--~~~~~~cp~h~~~f~~~~g~~~~~p~--------~~~l~~~~ 1031 (1466)
.+.+...++.+ .+|+++|+.+.|||.|++|..|.+ .++.+.||||||+|++.+|+|...|+ ...|+.|+
T Consensus 62 ~~~g~~vvl~r-~~G~v~a~~n~CpHrga~L~~g~~~~~~~~i~CpyHgw~fd~~~G~~~~~p~~p~~~~~~~~~l~~~~ 140 (446)
T 1z01_A 62 QICGVPIVLRR-VNGKVFALKDQCLHRGVRLSEKPTCFTKSTISCWYHGFTFDLETGKLVTIVANPEDKLIGTTGVTTYP 140 (446)
T ss_dssp EETTEEEEEEE-ETTEEEEEESSCTTTCCCGGGSCCCSSTTEEECTTTCEEEETTTCBEEEETTCTTCTTTTSCBCCEEC
T ss_pred EECCEEEEEEE-eCCEEEEEeCcCCCCcCCCCCCccCCCCCEEEeCCCCeEEeCCCCCccccCCCccccCcccCCCcEEE
Confidence 33333333444 588999999999999999999974 57999999999999988999987643 34699999
Q ss_pred EEEEcCCEEEEEcc
Q psy2951 1032 VTIQNDDSVVVQAR 1045 (1466)
Q Consensus 1032 v~~~~~~~~~~~~~ 1045 (1466)
+++ .+|.+++...
T Consensus 141 v~~-~~G~V~v~~~ 153 (446)
T 1z01_A 141 VHE-VNGMIFVFVR 153 (446)
T ss_dssp EEE-ETTEEEEEEC
T ss_pred EEE-ECCEEEEEeC
Confidence 998 7888888754
No 276
>2gbw_A Biphenyl 2,3-dioxygenase alpha subunit; rieske oxygenase, oxidoreductase, non heme iron; 1.70A {Sphingobium yanoikuyae} PDB: 2gbx_A* 2ckf_A
Probab=98.44 E-value=1.4e-07 Score=113.30 Aligned_cols=74 Identities=18% Similarity=0.284 Sum_probs=62.6
Q ss_pred hhhhhhhhhhhhcCCCCCCCccccceee-cCCEEEcCCCCceeecCCCccccCCCCC------------CCCeEEEEEEc
Q psy2951 970 AAQFAERNIYAVGTKCSHYGAPLVKGSL-GDGRVRCPWHGACFNIATGDIEDFPGMD------------SLPCYKVTIQN 1036 (1466)
Q Consensus 970 ~~~~~~g~~~a~~~~C~h~g~~l~~g~~-~~~~~~cp~h~~~f~~~~g~~~~~p~~~------------~l~~~~v~~~~ 1036 (1466)
+++..+|+++|+.+.|||.|++|..|.. .++.+.||||||+|++ +|+|+..|... .|+.|+|++ .
T Consensus 65 v~R~~~G~v~a~~n~CpHrga~L~~g~~g~~~~i~CpyHgw~f~~-~G~~~~~P~~~~~~~~~~~~~~~~l~~~~v~~-~ 142 (454)
T 2gbw_A 65 LSHQSDGTFRAFINSCSHRGNQICHADSGNAKAFVCNYHGWVFGQ-DGSLVDVPLESRCYHNSLDKQKLAAKSVRVET-Y 142 (454)
T ss_dssp EEECTTSCEEEEESSCTTTCCCSCCCSEEECSEEECTTTCCEEET-TSCEEECTTTTTTTTTCCCGGGCCCCEEEEEE-E
T ss_pred EEEcCCCCEEEEeccCCCCCCCCcccccCCcCEEEeCCCCCEecC-CCCcccCCcccccccccCCHhhCCCeeEEEEE-E
Confidence 3445688999999999999999998766 5789999999999997 89999887643 488999998 7
Q ss_pred CCEEEEEcc
Q psy2951 1037 DDSVVVQAR 1045 (1466)
Q Consensus 1037 ~~~~~~~~~ 1045 (1466)
+|.+++...
T Consensus 143 ~G~v~v~~~ 151 (454)
T 2gbw_A 143 KGFIFGCHD 151 (454)
T ss_dssp TTEEEEECC
T ss_pred CCEEEEEeC
Confidence 888888754
No 277
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.44 E-value=9.8e-08 Score=116.78 Aligned_cols=145 Identities=14% Similarity=0.082 Sum_probs=103.8
Q ss_pred ecCEEEEcCCCCCCcCCCCCCCC--cEEEecCHHHHHhh---------cc--cCCCCCcEEEECCChHHHHHHHHHhccC
Q psy2951 691 DFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNI---------AP--HITPESNVVVIGSSFIGMEAAAFCASKV 757 (1466)
Q Consensus 691 ~~d~lviAtG~~~~~~~~~~g~~--~~~~~~~~~~~~~~---------~~--~~~~~~~vvVvG~G~~g~e~A~~l~~~g 757 (1466)
.||.+++++|++|+.++++ +.+ .++......+...+ .. ......+|+|||||.+|+.+|..|++.|
T Consensus 37 ~~~~l~~~~g~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~~G 115 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQ-YHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELALLG 115 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHH-HHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCCCcEe-ehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHHCC
Confidence 4788999999998877665 433 33334444444444 11 1234678999999999999999999999
Q ss_pred CeEEEEeecCccCcc--------------c------------------cCHHHHHHHHHHHHhcCcEEEccceEEEEEec
Q psy2951 758 KSVTVVGRGAVPFQE--------------S------------------LGKEVGERITKLFESKGVKFVMKANVSSFEKN 805 (1466)
Q Consensus 758 ~~V~lv~~~~~~~~~--------------~------------------~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~ 805 (1466)
.+|+|+++.+..... . -..++.+.+.+.+++.||++++++++++++..
T Consensus 116 ~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~ 195 (497)
T 2bry_A 116 ARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPP 195 (497)
T ss_dssp CEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECC
T ss_pred CeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEe
Confidence 999999987643100 0 00455667778888899999999999999853
Q ss_pred C-CCceEEEEC--C-CC--cEEecCEEEEccccccCc
Q psy2951 806 E-KNDVTAANL--D-NG--TTIPADLVIVGIGTVLNT 836 (1466)
Q Consensus 806 ~-~~~~~~v~~--~-~g--~~i~~D~vi~a~G~~p~~ 836 (1466)
+ ++....+.+ . +| .++.+|.||+|+|..+..
T Consensus 196 ~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 196 PRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp CSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred cCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 1 222334544 4 56 579999999999998764
No 278
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.41 E-value=1.9e-07 Score=115.62 Aligned_cols=57 Identities=26% Similarity=0.401 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccc
Q psy2951 1247 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV 1304 (1466)
Q Consensus 1247 ~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~ 1304 (1466)
..+.+.|.+.+++.|++|+++++|++|. .+++++..|+++||+++.||.||++++..
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~-~~~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHME-TTGNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEE-EETTEEEEEEETTSCEEECSCEEECCC--
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEE-eeCCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 4677889999999999999999999998 56778999999999999999999987643
No 279
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.39 E-value=6e-07 Score=111.99 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=30.3
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN 630 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~ 630 (1466)
.+||||||||+||++||+.|++.|....|+++|+..
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~ 40 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVY 40 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence 479999999999999999999999323388888864
No 280
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.39 E-value=2.1e-06 Score=106.76 Aligned_cols=60 Identities=18% Similarity=0.275 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHhC-CcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCc
Q psy2951 1247 KEVGERITKLFESK-GVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNT 1307 (1466)
Q Consensus 1247 ~~~~~~l~~~~~~~-gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~ 1307 (1466)
..+.+.|.+.+++. ||+++.+ +|+++...+++.+..|.+.+|+++.+|.||.|+|.....
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhh
Confidence 46778888888888 9999999 999997444566778999999889999999999987653
No 281
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.39 E-value=4.5e-07 Score=113.14 Aligned_cols=35 Identities=20% Similarity=0.297 Sum_probs=31.2
Q ss_pred CcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCC
Q psy2951 1067 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN 1101 (1466)
Q Consensus 1067 ~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~ 1101 (1466)
.+|||||||+||++||..|++.|.+.+|+|||+.+
T Consensus 6 ~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~ 40 (602)
T 1kf6_A 6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVY 40 (602)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence 58999999999999999999999333999999974
No 282
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.38 E-value=4.4e-07 Score=111.12 Aligned_cols=146 Identities=16% Similarity=0.193 Sum_probs=92.9
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCC-CCCCCCCccch----------h------------------cc
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN-FLPYDRVKLSK----------Q------------------LD 644 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~-~~~~~~~~~~~----------~------------------~~ 644 (1466)
..+||+|||||+||++||..|++.|.+ |+++++.. .++...+.... . +.
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~k--VlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~ 97 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLH--CLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFR 97 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC--EEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCc--EEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchh
Confidence 358999999999999999999999988 77777763 12211110000 0 00
Q ss_pred ----------------cCcccccccCHhHhhhC-CcEEEEceEEEEeccccccE---EEccCCCEEecCEEEEcCCCCCC
Q psy2951 645 ----------------IKADSILLRTEEFYKDN-DIHVIKGKKIISDSELNEKK---IKLQDGTSIDFTKIYLATGSSPR 704 (1466)
Q Consensus 645 ----------------~~~~~~~~~~~~~~~~~-gv~~~~~~~v~~i~~~~~~~---v~~~~~~~~~~d~lviAtG~~~~ 704 (1466)
.+...+...+.+.+++. |++++.+ .|..+ ..++.. |.+.+|.++.+|+||+|||+.+.
T Consensus 98 ~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L-~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 98 MLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGV-SANSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp EECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEE-EEETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred hcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEE-EecCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 00001122233445554 9999766 48776 332222 66677889999999999999877
Q ss_pred cCCCCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCChHHHHHHHHHhccCCeEEEEe
Q psy2951 705 TISQADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVG 764 (1466)
Q Consensus 705 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~ 764 (1466)
.+..+ |... +. +.+++ |+.++++++..|.+.|.+|..+.
T Consensus 176 ~~i~~-G~~~-~~----------------~g~~v---G~~~a~~la~~L~~~G~kv~~l~ 214 (641)
T 3cp8_A 176 GLIHI-GMDH-FP----------------GGRST---AEPPVEGLTESLASLGFSFGRLK 214 (641)
T ss_dssp CEEEE-TTEE-EE----------------CSSST---TSCCBCSHHHHHHHTTCCEEEEE
T ss_pred cccee-eeee-ec----------------ccccc---CCchhhhhHHHHHhCCceEEeec
Confidence 65555 4331 10 12221 46778899999999999887664
No 283
>2bmo_A Oxygenase-alpha NBDO; nitrobenzene dioxygenase, nitroarene, rieske non-heme dioxygenase, substrate specificity iron- sulfur, metal-binding, NAD; 1.2A {Comamonas SP} SCOP: b.33.1.2 d.129.3.3 PDB: 2bmq_A 2bmr_A* 2hmj_A 2hml_A* 2hmn_A* 1o7n_A 1ndo_A 1o7g_A* 1o7h_A 1o7m_A 1eg9_A 1o7p_A* 1o7w_A 1uuv_A 1uuw_A 2hmk_A* 2hmm_A* 2hmo_A*
Probab=98.36 E-value=1.3e-07 Score=113.32 Aligned_cols=74 Identities=16% Similarity=0.230 Sum_probs=62.5
Q ss_pred hhhhhhhhhhhhcCCCCCCCccccceee-cCCEEEcCCCCceeecCCCccccCCCC------------CCCCeEE-EEEE
Q psy2951 970 AAQFAERNIYAVGTKCSHYGAPLVKGSL-GDGRVRCPWHGACFNIATGDIEDFPGM------------DSLPCYK-VTIQ 1035 (1466)
Q Consensus 970 ~~~~~~g~~~a~~~~C~h~g~~l~~g~~-~~~~~~cp~h~~~f~~~~g~~~~~p~~------------~~l~~~~-v~~~ 1035 (1466)
+.+..+|+++|+.+.|||.|++|..|.. .++.+.||||||+|++ +|+|+..|.. ..|+.|+ |++
T Consensus 64 v~R~~~G~v~a~~n~CpHrga~L~~g~~g~~~~l~CpyHgw~f~~-~G~~~~~P~~~~~~~~~~~~~~~~l~~~~~v~~- 141 (447)
T 2bmo_A 64 VSRQNDGSVRAFLNVCRHRGKTLVHAEAGNAKGFVCGYHGWGYGS-NGELQSVPFEKELYGDAIKKKCLGLKEVPRIES- 141 (447)
T ss_dssp EEECTTSCEEEEESBCTTTCCBCCCSSEEECSEEECTTTCCEEET-TSCEEECTTHHHHTGGGCCGGGCCCCBCSEEEE-
T ss_pred EEECCCCCEEEEeccCcCCCCCccccccCCcCeEECCCCcchhcC-CCcccccCcccccccccCCHhHCCCcccceEEE-
Confidence 4455688999999999999999998866 5789999999999997 9999988753 2689997 887
Q ss_pred cCCEEEEEcc
Q psy2951 1036 NDDSVVVQAR 1045 (1466)
Q Consensus 1036 ~~~~~~~~~~ 1045 (1466)
.+|.+++...
T Consensus 142 ~~G~v~v~~~ 151 (447)
T 2bmo_A 142 FHGFIYGCFD 151 (447)
T ss_dssp ETTEEEEESC
T ss_pred ECCEEEEEcC
Confidence 7889998754
No 284
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.34 E-value=6.8e-07 Score=108.96 Aligned_cols=111 Identities=18% Similarity=0.226 Sum_probs=74.2
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCC-----------------C-----CCCCc--------c--
Q psy2951 592 SGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFL-----------------P-----YDRVK--------L-- 639 (1466)
Q Consensus 592 ~~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~-----------------~-----~~~~~--------~-- 639 (1466)
....+||+||||||||++||+.|++.|++ |+++|+.... + +.... +
T Consensus 104 ~~~~~DVVIVGgGpaGL~aA~~La~~G~k--V~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~ 181 (549)
T 3nlc_A 104 ENLTERPIVIGFGPCGLFAGLVLAQMGFN--PIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYS 181 (549)
T ss_dssp TTCCCCCEEECCSHHHHHHHHHHHHTTCC--CEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCC
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCe--EEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEE
Confidence 34458999999999999999999999988 7777776321 0 00000 0
Q ss_pred --ch-------------hcccC---------------cccccccCHhHhhhCCcEEEEceEEEEeccccc--cEEEccCC
Q psy2951 640 --SK-------------QLDIK---------------ADSILLRTEEFYKDNDIHVIKGKKIISDSELNE--KKIKLQDG 687 (1466)
Q Consensus 640 --~~-------------~~~~~---------------~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~--~~v~~~~~ 687 (1466)
.. ..+.. ...+...+.+.+++.|++++++++|+.+...+. ..|.+.++
T Consensus 182 ~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G 261 (549)
T 3nlc_A 182 QVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNG 261 (549)
T ss_dssp CSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTS
T ss_pred EeccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCC
Confidence 00 00000 012233344556678999999999998832222 23777788
Q ss_pred CEEecCEEEEcCCCCCC
Q psy2951 688 TSIDFTKIYLATGSSPR 704 (1466)
Q Consensus 688 ~~~~~d~lviAtG~~~~ 704 (1466)
+++.+|.||+|+|..+.
T Consensus 262 ~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 262 EEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp CEEECSCEEECCCTTCH
T ss_pred CEEECCEEEECCCCChh
Confidence 89999999999998774
No 285
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.34 E-value=7.9e-07 Score=105.39 Aligned_cols=107 Identities=16% Similarity=0.189 Sum_probs=74.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCcc--c-------------hhc----------------
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKL--S-------------KQL---------------- 643 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~--~-------------~~~---------------- 643 (1466)
.++|+|||||++|+++|..|+++|.+ |+++|+.+......... . ..+
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~--v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g 88 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWD--VRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHN 88 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE--EEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCC--EEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCC
Confidence 58999999999999999999999987 88888875443110000 0 000
Q ss_pred --------------ccCcccccccCHhHhhhCCcEEEEceEEEEeccccccEEEccCCCEEecCEEEEcCCCCCCc
Q psy2951 644 --------------DIKADSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPRT 705 (1466)
Q Consensus 644 --------------~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~ 705 (1466)
......+...+.+.+.+.|++++++++|+.+.. +. .+++.+|.++.+|.||.|+|.....
T Consensus 89 ~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~~-~v~~~~g~~~~ad~vV~AdG~~s~v 162 (379)
T 3alj_A 89 KSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-VG-RLTLQTGEVLEADLIVGADGVGSKV 162 (379)
T ss_dssp EEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-TT-EEEETTSCEEECSEEEECCCTTCHH
T ss_pred ceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-CC-EEEECCCCEEEcCEEEECCCccHHH
Confidence 000111222334455667999999999999843 55 8888888899999999999976543
No 286
>1uli_A Biphenyl dioxygenase large subunit; alpha3 BETA3 hetero hexamer, oxidoreductase; 2.20A {Rhodococcus SP} SCOP: b.33.1.2 d.129.3.3 PDB: 1ulj_A* 3en1_A* 3eqq_A
Probab=98.33 E-value=1.8e-07 Score=112.11 Aligned_cols=74 Identities=14% Similarity=0.232 Sum_probs=61.8
Q ss_pred hhhhhhhhhhhhcCCCCCCCccccceee-cCCEEEcCCCCceeecCCCccccCCCC-----------CCCCeEEEEEEcC
Q psy2951 970 AAQFAERNIYAVGTKCSHYGAPLVKGSL-GDGRVRCPWHGACFNIATGDIEDFPGM-----------DSLPCYKVTIQND 1037 (1466)
Q Consensus 970 ~~~~~~g~~~a~~~~C~h~g~~l~~g~~-~~~~~~cp~h~~~f~~~~g~~~~~p~~-----------~~l~~~~v~~~~~ 1037 (1466)
+++..+|+++|+.+.|||.|++|..|.. .++.+.||||||+|++ +|+|+..|.. ..|+.|+|++ .+
T Consensus 83 v~R~~~G~v~a~~n~CpHrga~L~~g~~g~~~~i~CpyHgw~fd~-~G~~~~~P~~~~~~~~~~~~~~~L~~~~v~~-~~ 160 (460)
T 1uli_A 83 VVRQKNGEIRVFLNQCRHRGMRICRADGGNAKSFTCSYHGWAYDT-GGNLVSVPFEEQAFPGLRKEDWGPLQARVET-YK 160 (460)
T ss_dssp EEECTTSCEEEEESCCTTTCCCSCCSSEEECSCEECTTTCCEECT-TCCEEECTTHHHHCTTCCGGGSSCCEEEEEE-ET
T ss_pred EEEcCCCCEEEEeeeCCCCCCCCccccCCCCCEEEcCCCCCEEeC-CCCEeeCCccccccCCCCHhHcCCceeeEEE-EC
Confidence 3444688999999999999999998765 4678999999999997 9999988753 2388999998 78
Q ss_pred CEEEEEcc
Q psy2951 1038 DSVVVQAR 1045 (1466)
Q Consensus 1038 ~~~~~~~~ 1045 (1466)
|.+++...
T Consensus 161 G~V~v~~~ 168 (460)
T 1uli_A 161 GLIFANWD 168 (460)
T ss_dssp TEEEEECC
T ss_pred CEEEEEeC
Confidence 88988654
No 287
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.33 E-value=5.7e-07 Score=106.82 Aligned_cols=107 Identities=16% Similarity=0.252 Sum_probs=71.9
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCC-------CCc-------cchhcc---------------
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD-------RVK-------LSKQLD--------------- 644 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~-------~~~-------~~~~~~--------------- 644 (1466)
..+||+|||||+||++||+.|+++|.+ |+++|+.+..+.. .+. ......
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~--V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRR--VLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRP 103 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCC--EEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCc--EEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCH
Confidence 468999999999999999999999987 8888887643210 000 000000
Q ss_pred -------------------------cCcccccccCHhHhhhCCcEEEEceEEEEeccc-cccEEEccCCCEEecCEEEEc
Q psy2951 645 -------------------------IKADSILLRTEEFYKDNDIHVIKGKKIISDSEL-NEKKIKLQDGTSIDFTKIYLA 698 (1466)
Q Consensus 645 -------------------------~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~-~~~~v~~~~~~~~~~d~lviA 698 (1466)
.....+...+.+.+++.|++++++++|+.+... ....|.+.++ ++.+|+||+|
T Consensus 104 ~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlA 182 (417)
T 3v76_A 104 QDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVA 182 (417)
T ss_dssp HHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEEC
T ss_pred HHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEEC
Confidence 001123333445566779999999999888322 2345666666 8999999999
Q ss_pred CCCCC
Q psy2951 699 TGSSP 703 (1466)
Q Consensus 699 tG~~~ 703 (1466)
||...
T Consensus 183 tG~~S 187 (417)
T 3v76_A 183 SGGKS 187 (417)
T ss_dssp CCCSS
T ss_pred CCCcc
Confidence 99765
No 288
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.27 E-value=7.5e-07 Score=105.56 Aligned_cols=109 Identities=17% Similarity=0.159 Sum_probs=70.8
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCc-------------cchhc-----------------
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK-------------LSKQL----------------- 91 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~~~~-------------~~~~~----------------- 91 (1466)
.++||+|||||++|+++|..|++.|.++.|+|............. +...+
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 89 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNK 89 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCc
Confidence 357999999999999999999999998877654332211000000 00000
Q ss_pred -------------ccCcccccccChhhhhcCCeEEEeCceEEEeccccccEEEecCCcEEecCEEEEccCCCCC
Q psy2951 92 -------------DIKADSILLRTEEFYKDNDIHVIKGKKIISDSELNEKKIKLQDGTSIDFTKIYLATGSSPR 152 (1466)
Q Consensus 92 -------------~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~v~~~~~~~~~~d~lviAtG~~~~ 152 (1466)
......+...+.+.+.+.+++++.++.+..... +. ++++.++.++.+|.||.|+|....
T Consensus 90 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~~-~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 90 SVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-VG-RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp EEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-TT-EEEETTSCEEECSEEEECCCTTCH
T ss_pred eeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-CC-EEEECCCCEEEcCEEEECCCccHH
Confidence 000011122234445567999999988766443 44 888888889999999999998654
No 289
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.24 E-value=1.8e-06 Score=105.77 Aligned_cols=149 Identities=15% Similarity=0.167 Sum_probs=88.2
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCccc----------hhc---c-----------c----
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLS----------KQL---D-----------I---- 93 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~~~~~~~----------~~~---~-----------~---- 93 (1466)
.++||+|||||+||++||..|++.|.+|.|++...... ....+..+ ..+ . .
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~i-G~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~ 98 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAV-ARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRM 98 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGT-TCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEeccccc-CCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhh
Confidence 35899999999999999999999999988876542111 10000000 000 0 0
Q ss_pred ----------------CcccccccChhhhhc-CCeEEEeCceEEEeccccccE-EEecCCcEEecCEEEEccCCCCCCCC
Q psy2951 94 ----------------KADSILLRTEEFYKD-NDIHVIKGKKIISDSELNEKK-IKLQDGTSIDFTKIYLATGSSPRTIS 155 (1466)
Q Consensus 94 ----------------~~~~~~~~~~~~~~~-~~v~~~~~~~v~~~~~~~~~~-v~~~~~~~~~~d~lviAtG~~~~~~~ 155 (1466)
+...+...+.+.+++ .+++++.+.......+.+... |.+.+|..+.+|.||+|||+.+..+.
T Consensus 99 l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~~i 178 (641)
T 3cp8_A 99 LNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLNGLI 178 (641)
T ss_dssp ECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBTCEE
T ss_pred cccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCCccc
Confidence 000112223344555 489987764433222222222 66778889999999999999876332
Q ss_pred CCCCCCcEEEecCHHHHHhhcccCCCCCcEEEECCCHhHHHHHHHHhhCCCEEEEEe
Q psy2951 156 QADGVNKVFYLRTVEDANNIAPHITPESNVVVIGSSFIGMEAAAFCASKVKSVTVVG 212 (1466)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~g~~Vtlv~ 212 (1466)
.+ +... + ++.+++ |+.++++++..|.+.|.+|+.+.
T Consensus 179 ~~-G~~~-~----------------~~g~~v---G~~~a~~la~~L~~~G~kv~~l~ 214 (641)
T 3cp8_A 179 HI-GMDH-F----------------PGGRST---AEPPVEGLTESLASLGFSFGRLK 214 (641)
T ss_dssp EE-TTEE-E----------------ECSSST---TSCCBCSHHHHHHHTTCCEEEEE
T ss_pred ee-eeee-e----------------cccccc---CCchhhhhHHHHHhCCceEEeec
Confidence 11 1110 0 011221 45678899999999999887654
No 290
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.24 E-value=6.5e-06 Score=97.22 Aligned_cols=66 Identities=11% Similarity=0.057 Sum_probs=51.4
Q ss_pred cHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCC--CeeecCEEEEeeccccCccccccC
Q psy2951 1246 GKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNG--TTIPADLVIVGIGTVLNTNYLDGK 1313 (1466)
Q Consensus 1246 ~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g--~~i~~D~vv~a~G~~p~~~~~~~~ 1313 (1466)
+..+.+.|.+.++++|++++++++|+++.. +++....|.+.+| .++.||.||+|+|.... .+++..
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~-~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~-~l~~~~ 216 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRV-RPEGGFELDFGGAEPMTLSCRVLINAAGLHAP-GLARRI 216 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-CTTSSEEEEECTTSCEEEEEEEEEECCGGGHH-HHHHTE
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEE-cCCceEEEEECCCceeEEEeCEEEECCCcchH-HHHHHh
Confidence 457888899999999999999999999983 3334345888888 48999999999997643 444444
No 291
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.23 E-value=2.8e-06 Score=104.63 Aligned_cols=54 Identities=24% Similarity=0.350 Sum_probs=38.1
Q ss_pred CccEEECCCCCcCCCCEEEecccccccCccCCCCcceec--cHHHHHHHHHHHHHHhcCC
Q psy2951 297 QKAVVVNEYLETNVPGVYAGGDIAYAPLHSFYNKNASIG--HYQLAQYHGRIAALNMVEK 354 (1466)
Q Consensus 297 ~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~g~~~~~~--~~~~A~~~g~~aa~~i~~~ 354 (1466)
.|.|.+|...||++||+||+|+|+... ++|.. +.+ ....+.-.|++|+++++..
T Consensus 354 ~GGi~vd~~~~t~I~GLyAaGE~a~~g---~hGan-rl~gnsl~~~~vfG~~Ag~~aa~~ 409 (540)
T 1chu_A 354 CGGVMVDDHGRTDVEGLYAIGEVSYTG---LHGAN-RMASNSLLECLVYGWSAAEDITRR 409 (540)
T ss_dssp SCEEECCTTCBCSSBTEEECGGGEECS---SSTTS-CCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcEEECCCCCCccCCEEecccccccc---ccCCC-cCcchhHHHHHHHHHHHHHHHHHh
Confidence 478999999999999999999998432 12222 222 2334667789998888643
No 292
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.22 E-value=1.8e-06 Score=104.33 Aligned_cols=110 Identities=22% Similarity=0.338 Sum_probs=73.1
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCC-------CCCccc------h---hc------------
Q psy2951 592 SGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY-------DRVKLS------K---QL------------ 643 (1466)
Q Consensus 592 ~~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~-------~~~~~~------~---~~------------ 643 (1466)
....+||+|||||+||+++|+.|+++|.+ |+++|+.+.... ..+.+. . .+
T Consensus 23 ~~~~~dVvIIGgG~aGl~aA~~la~~G~~--V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (447)
T 2i0z_A 23 NAMHYDVIVIGGGPSGLMAAIGAAEEGAN--VLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFS 100 (447)
T ss_dssp --CCCSEEEECCSHHHHHHHHHHHHTTCC--EEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHH
T ss_pred ccCCCCEEEECCcHHHHHHHHHHHHCCCC--EEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHH
Confidence 34458999999999999999999999987 888888754321 000000 0 00
Q ss_pred --------------cc---------------CcccccccCHhHhhhCCcEEEEceEEEEeccccc--cEEEccCCCEEec
Q psy2951 644 --------------DI---------------KADSILLRTEEFYKDNDIHVIKGKKIISDSELNE--KKIKLQDGTSIDF 692 (1466)
Q Consensus 644 --------------~~---------------~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~--~~v~~~~~~~~~~ 692 (1466)
+. ....+...+.+.+++.|++++++++|+.+...+. ..|.+.++.++.+
T Consensus 101 ~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~A 180 (447)
T 2i0z_A 101 IFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLET 180 (447)
T ss_dssp HSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEEC
T ss_pred hcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEEC
Confidence 00 0012222334456678999999999998832222 4567777777999
Q ss_pred CEEEEcCCCCC
Q psy2951 693 TKIYLATGSSP 703 (1466)
Q Consensus 693 d~lviAtG~~~ 703 (1466)
|.||+|||...
T Consensus 181 d~VVlAtGg~s 191 (447)
T 2i0z_A 181 NHVVIAVGGKS 191 (447)
T ss_dssp SCEEECCCCSS
T ss_pred CEEEECCCCCc
Confidence 99999999766
No 293
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.21 E-value=5.3e-06 Score=102.19 Aligned_cols=35 Identities=11% Similarity=0.309 Sum_probs=30.8
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENF 631 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~ 631 (1466)
...||||||||+|||+||+.|++ |.+ |+++|+...
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~--V~vlEk~~~ 41 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQ--VIVLSKGPV 41 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSC--EEEECSSCT
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCc--EEEEECCCC
Confidence 35799999999999999999999 987 888888754
No 294
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.21 E-value=2.4e-06 Score=104.16 Aligned_cols=113 Identities=20% Similarity=0.289 Sum_probs=89.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcC------------------------------------C----cc-
Q psy2951 1205 ESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVP------------------------------------F----QE- 1243 (1466)
Q Consensus 1205 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~------------------------------------~----~~- 1243 (1466)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+ + ..
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 468999999999999999999999999999987432 0 00
Q ss_pred --------------------------cc----cHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeee
Q psy2951 1244 --------------------------SL----GKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIP 1293 (1466)
Q Consensus 1244 --------------------------~~----~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~ 1293 (1466)
.+ ...+.+.+.+.+++.|++++++++|+++. .+++++..|.+.+|+++.
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~-~~~~~v~gV~l~~G~~i~ 265 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLH-MEDGQITGVTLSNGEEIK 265 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEE-ESSSBEEEEEETTSCEEE
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEE-EeCCEEEEEEECCCCEEE
Confidence 00 04456667788889999999999999998 456678889999999999
Q ss_pred cCEEEEeeccccCc--cccccCCceee
Q psy2951 1294 ADLVIVGIGTVLNT--NYLDGKGVELN 1318 (1466)
Q Consensus 1294 ~D~vv~a~G~~p~~--~~~~~~gl~~~ 1318 (1466)
||.||+|+|..+.. .++...|+...
T Consensus 266 Ad~VVlA~G~~s~~~~~~l~~~Gi~~~ 292 (549)
T 3nlc_A 266 SRHVVLAVGHSARDTFEMLHERGVYME 292 (549)
T ss_dssp CSCEEECCCTTCHHHHHHHHHTTCCCE
T ss_pred CCEEEECCCCChhhHHHHHHHcCCCcc
Confidence 99999999998853 24555555433
No 295
>2b1x_A Naphthalene dioxygenase large subunit; rieske non-heme iron oxygenase, oxidoreductase; 2.00A {Rhodococcus SP} SCOP: b.33.1.2 d.129.3.3 PDB: 2b24_A
Probab=98.20 E-value=7.7e-07 Score=107.13 Aligned_cols=74 Identities=19% Similarity=0.376 Sum_probs=58.6
Q ss_pred hhhhhhhhhhhhcCCCCCCCccccceeec-CCEEEcCCCCceeecCCCccccCCCCC------------CCCeE-EEEEE
Q psy2951 970 AAQFAERNIYAVGTKCSHYGAPLVKGSLG-DGRVRCPWHGACFNIATGDIEDFPGMD------------SLPCY-KVTIQ 1035 (1466)
Q Consensus 970 ~~~~~~g~~~a~~~~C~h~g~~l~~g~~~-~~~~~cp~h~~~f~~~~g~~~~~p~~~------------~l~~~-~v~~~ 1035 (1466)
+++..+|+++|+.+.|||.|++|..|... ++.+.||||||+|++ +|+|+..|... .|..+ .+++
T Consensus 73 v~R~~~G~v~a~~n~C~Hrga~L~~g~~~~~~~i~CpyHgw~f~~-~G~~~~~P~~~~~~~~~~~~~~~~l~~~p~ve~- 150 (470)
T 2b1x_A 73 VCRDEGGEIRGHLNACRHRGMQVCRAEMGNTSHFRCPYHGWTYSN-TGSLVGVPAGKDAYGNQLKKSDWNLRPMPNLAS- 150 (470)
T ss_dssp EEECTTSCEEEEESSCTTTCCCSCCSSEEECSEEECTTTCCEEET-TSCEEECTTTTTTTTTCCCGGGGSCCBCSEEEE-
T ss_pred EEEcCCCCEEEEecccCCCCCEeeccCcCCCCEEEECCCCCeecC-CCceeecCcccccccccCCHhhCCCcccceEEE-
Confidence 44556889999999999999999988765 479999999999997 99999888642 24445 3332
Q ss_pred cCCEEEEEcc
Q psy2951 1036 NDDSVVVQAR 1045 (1466)
Q Consensus 1036 ~~~~~~~~~~ 1045 (1466)
.+|.+++...
T Consensus 151 ~~G~Vfv~~~ 160 (470)
T 2b1x_A 151 YKGLIFGSLD 160 (470)
T ss_dssp ETTEEEEESC
T ss_pred ECCEEEEEeC
Confidence 5889998754
No 296
>3gzx_A Biphenyl dioxygenase subunit alpha; rieskie, non-heme iron, 2Fe-2S, aromatic hydroc catabolism, iron, iron-sulfur, metal-binding, NAD; HET: BNL MES; 1.58A {Comamonas testosteroni} PDB: 3gzy_A* 1wql_A 2xso_A 2xsh_A 2xrx_A* 2xr8_A* 2yfi_A 2yfj_A* 2yfl_A*
Probab=98.20 E-value=1.1e-06 Score=103.72 Aligned_cols=76 Identities=17% Similarity=0.297 Sum_probs=62.2
Q ss_pred hhhhhhhhhhhhcCCCCCCCcccccee-ecCCEEEcCCCCceeecCCCccccCCCC------------------CCCCeE
Q psy2951 970 AAQFAERNIYAVGTKCSHYGAPLVKGS-LGDGRVRCPWHGACFNIATGDIEDFPGM------------------DSLPCY 1030 (1466)
Q Consensus 970 ~~~~~~g~~~a~~~~C~h~g~~l~~g~-~~~~~~~cp~h~~~f~~~~g~~~~~p~~------------------~~l~~~ 1030 (1466)
+++..+|+++|+.+.|||.|++|..|. ..++.+.||||||+|++ +|+|...|.. ..|..|
T Consensus 85 v~R~~dG~v~A~~n~C~Hrga~L~~g~~g~~~~i~CpyHgw~fd~-~G~~~~~P~~~~~~~~~~~~~~~~~~~~~~L~~~ 163 (457)
T 3gzx_A 85 MVRQKDQSIKVFLNQCRHRGMRIVRSDGGNAKAFTCTYHGWAYDI-AGNLVNVPFEKEAFCDKKEGDCGFDKADWGPLQA 163 (457)
T ss_dssp EEECTTSCEEEEESCCTTTCCCSCCSSEEECSEEECTTTCCEEET-TSCEEECTTHHHHTCSSSTTTTSCCGGGCCCCEE
T ss_pred EEECCCCeEEEEeCcCCCCCcCccCCCCCcCCEEEcCCCCCEecC-CCcceecCccccccccccccccccChhhCCCceE
Confidence 445568999999999999999999875 56789999999999996 8999877652 137889
Q ss_pred EEEEEcCCEEEEEcchh
Q psy2951 1031 KVTIQNDDSVVVQARKD 1047 (1466)
Q Consensus 1031 ~v~~~~~~~~~~~~~~~ 1047 (1466)
+|++ ..|.++++....
T Consensus 164 ~v~e-~~G~Vfv~~~~~ 179 (457)
T 3gzx_A 164 RVET-YKGLVFANWDPE 179 (457)
T ss_dssp EEEE-ETTEEEEESCTT
T ss_pred eEEE-ECCEEEEecCCC
Confidence 8887 788999976543
No 297
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.18 E-value=1.7e-06 Score=104.52 Aligned_cols=107 Identities=21% Similarity=0.325 Sum_probs=72.1
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCC-------CCCCCc------hh---hc------------c
Q psy2951 1065 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY-------DRVKLS------KQ---LD------------I 1116 (1466)
Q Consensus 1065 ~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~-------~~~~l~------~~---~~------------~ 1116 (1466)
...+|+|||||+||+++|..|++.|. +|+|||+.+.... .+..+. .. +. .
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~--~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGA--NVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIF 102 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC--CEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCC--CEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhc
Confidence 34789999999999999999999998 9999999864320 000000 00 00 0
Q ss_pred --------------Cc---------------ccccccChhhhccCCcEEEcCCeEEEeecCCCC---eEEecCCcEEecC
Q psy2951 1117 --------------KA---------------DSILLRTEEFYKDNDIHVIKGKKIISDSELNEK---KIKLQDGTSIDFT 1164 (1466)
Q Consensus 1117 --------------~~---------------~~~~~~~~~~~~~~~v~~~~~~~v~~i~d~~~~---~v~~~~g~~~~yd 1164 (1466)
.. ..+.....+.+++.|++++.+++|+++ ..+.. .|.+.+|..+.+|
T Consensus 103 ~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i-~~~~~~v~~V~~~~G~~i~Ad 181 (447)
T 2i0z_A 103 NNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETI-EYENGQTKAVILQTGEVLETN 181 (447)
T ss_dssp CHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEE-EEETTEEEEEEETTCCEEECS
T ss_pred CHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEE-EecCCcEEEEEECCCCEEECC
Confidence 00 000000112344569999999999999 64333 4777888779999
Q ss_pred eEEEecCCCC
Q psy2951 1165 KIYLATGSSP 1174 (1466)
Q Consensus 1165 ~lvlAtG~~~ 1174 (1466)
.||+|||...
T Consensus 182 ~VVlAtGg~s 191 (447)
T 2i0z_A 182 HVVIAVGGKS 191 (447)
T ss_dssp CEEECCCCSS
T ss_pred EEEECCCCCc
Confidence 9999999866
No 298
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.18 E-value=3.1e-06 Score=101.95 Aligned_cols=59 Identities=19% Similarity=0.193 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCCeEEEEcCCCc--EEeccEEEEeecccc
Q psy2951 224 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGT--TIPADLVIVGIGTVL 282 (1466)
Q Consensus 224 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~v~~~~g~--~i~~D~Vi~a~G~~p 282 (1466)
..+.+.+.+.+++.|++++.+++|++++.++++....+.+.+|+ ++.+|.||.|+|...
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 45566777777888999999999999987644334456667887 799999999999765
No 299
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.14 E-value=1.6e-05 Score=93.76 Aligned_cols=67 Identities=12% Similarity=0.106 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCC--cEEecCEEEEccccccCccccccC-Cc
Q psy2951 776 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNG--TTIPADLVIVGIGTVLNTNYLDGK-GV 844 (1466)
Q Consensus 776 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g--~~i~~D~vi~a~G~~p~~~~~~~~-gl 844 (1466)
..+...+.+.+++.|++++++++|+++...+++ ...+.+.+| .++.+|.||+|+|.... .+++.+ |+
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~~~v~~~~g~~~~~~a~~VV~A~G~~s~-~l~~~~~g~ 219 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPEG-GFELDFGGAEPMTLSCRVLINAAGLHAP-GLARRIEGI 219 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTS-SEEEEECTTSCEEEEEEEEEECCGGGHH-HHHHTEETS
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCc-eEEEEECCCceeEEEeCEEEECCCcchH-HHHHHhcCC
Confidence 567788888899999999999999999854433 235777777 48999999999998643 455554 44
No 300
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.14 E-value=1.1e-06 Score=108.82 Aligned_cols=52 Identities=15% Similarity=0.201 Sum_probs=40.0
Q ss_pred HHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccc
Q psy2951 1251 ERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV 1304 (1466)
Q Consensus 1251 ~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~ 1304 (1466)
.....+.+..|++++++++|++|+ .+++.+. |.+.+|+++.||.||++++..
T Consensus 216 ~l~~~l~~~lg~~i~~~~~V~~i~-~~~~~v~-v~~~~g~~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 216 QVSERIMDLLGDRVKLERPVIYID-QTRENVL-VETLNHEMYEAKYVISAIPPT 267 (520)
T ss_dssp HHHHHHHHHHGGGEESSCCEEEEE-CSSSSEE-EEETTSCEEEESEEEECSCGG
T ss_pred HHHHHHHHHcCCcEEcCCeeEEEE-ECCCeEE-EEECCCeEEEeCEEEECCCHH
Confidence 334444455588999999999998 4444544 888999999999999998864
No 301
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.12 E-value=1.5e-05 Score=95.54 Aligned_cols=58 Identities=22% Similarity=0.266 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccC
Q psy2951 776 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLN 835 (1466)
Q Consensus 776 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 835 (1466)
..+...+.+.+++.|++++.+++|+++... ++.+..+.+.+| ++.+|.||+|+|....
T Consensus 174 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~g-~~~a~~vV~a~G~~s~ 231 (405)
T 2gag_B 174 DHVAWAFARKANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTRG-TIHAGKVALAGAGHSS 231 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTC-CEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCCc-eEECCEEEECCchhHH
Confidence 466777888889999999999999999843 455667777777 7999999999997643
No 302
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.12 E-value=6.9e-06 Score=99.42 Aligned_cols=58 Identities=22% Similarity=0.251 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHhCCcEEEcCc---eEEEEEecCCCCeEEEEcCCCcEEeccEEEEeecccc
Q psy2951 224 KEVGERITKLFESKGVKFVMKA---NVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVL 282 (1466)
Q Consensus 224 ~~~~~~l~~~l~~~GV~i~~~~---~v~~i~~~~~~~~~~v~~~~g~~i~~D~Vi~a~G~~p 282 (1466)
..+...+.+.+++.|+++++++ +|+++..++ +.+..|.+.+|+++.+|.||+|+|.-.
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~-~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN-NDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET-TEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC-CeEEEEEECCCCEEECCEEEECCCCCh
Confidence 5677888888999999999999 999998653 466668888888999999999999653
No 303
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.12 E-value=8.9e-06 Score=100.94 Aligned_cols=58 Identities=19% Similarity=0.267 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCCeEEEEcC-CC--cEEeccEEEEeecccc
Q psy2951 224 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLD-NG--TTIPADLVIVGIGTVL 282 (1466)
Q Consensus 224 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~v~~~-~g--~~i~~D~Vi~a~G~~p 282 (1466)
..+...+.+.+++.|++++.+++|+++..++ +....+.+. +| .++.+|.||.|+|...
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~-g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLSD-PDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECCS-TTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 4566677778888999999999999998653 345556665 56 5799999999999854
No 304
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.11 E-value=4.4e-06 Score=99.79 Aligned_cols=107 Identities=14% Similarity=0.137 Sum_probs=70.4
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCC--cc-------------chhc----------------
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRV--KL-------------SKQL---------------- 643 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~--~~-------------~~~~---------------- 643 (1466)
.+||+|||||++|+++|+.|+++|.+ |+++|+.+....... .+ ...+
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~--V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHR--VVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHD 83 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC--EEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEET
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCc--EEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCC
Confidence 47999999999999999999999988 788887654310000 00 0000
Q ss_pred -----c--------------cCcccccccCHhHhhhC-CcEEEEceEEEEeccc-ccc--EEEccCCCEEecCEEEEcCC
Q psy2951 644 -----D--------------IKADSILLRTEEFYKDN-DIHVIKGKKIISDSEL-NEK--KIKLQDGTSIDFTKIYLATG 700 (1466)
Q Consensus 644 -----~--------------~~~~~~~~~~~~~~~~~-gv~~~~~~~v~~i~~~-~~~--~v~~~~~~~~~~d~lviAtG 700 (1466)
. .....+...+.+.+.+. |++++.+++|+.+... +.. .+++.+|+++++|.||.|+|
T Consensus 84 g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG 163 (399)
T 2x3n_A 84 GELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADG 163 (399)
T ss_dssp TEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCC
T ss_pred CCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCC
Confidence 0 00011112223344555 8999999999988322 233 67777888999999999999
Q ss_pred CCC
Q psy2951 701 SSP 703 (1466)
Q Consensus 701 ~~~ 703 (1466)
...
T Consensus 164 ~~s 166 (399)
T 2x3n_A 164 IAS 166 (399)
T ss_dssp TTC
T ss_pred CCh
Confidence 654
No 305
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.08 E-value=2.2e-05 Score=97.42 Aligned_cols=59 Identities=19% Similarity=0.287 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHhc-CcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccC
Q psy2951 776 KEVGERITKLFESK-GVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLN 835 (1466)
Q Consensus 776 ~~~~~~~~~~l~~~-gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 835 (1466)
..+...+.+.+++. ||+++.+ +|+++...+++.+..+.+.+|+++.+|.||.|+|....
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 45677888888888 9999999 99999855556667788888988999999999998654
No 306
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.07 E-value=8.1e-06 Score=100.83 Aligned_cols=57 Identities=26% Similarity=0.398 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccc
Q psy2951 776 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV 833 (1466)
Q Consensus 776 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 833 (1466)
..+.+.+.+.+++.|++|+++++|++|.. +++++..|++.+|+++.+|.||.+++..
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~-~~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMET-TGNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSCEEECCC--
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEe-eCCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 45677888899999999999999999984 4677888999999999999999987653
No 307
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.06 E-value=4e-07 Score=113.97 Aligned_cols=59 Identities=19% Similarity=0.330 Sum_probs=45.1
Q ss_pred HhcCcEEEccceEEEEEecCC-CceEEEECC---CCc--EEecCEEEEccccccCccccccCCce
Q psy2951 787 ESKGVKFVMKANVSSFEKNEK-NDVTAANLD---NGT--TIPADLVIVGIGTVLNTNYLDGKGVE 845 (1466)
Q Consensus 787 ~~~gv~~~~~~~v~~i~~~~~-~~~~~v~~~---~g~--~i~~D~vi~a~G~~p~~~~~~~~gl~ 845 (1466)
++.||++++++.+++|..+++ +++..|.+. +|+ ++.+|.||+|+|..+++.++...|+.
T Consensus 271 ~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG 335 (623)
T 3pl8_A 271 PEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFG 335 (623)
T ss_dssp EEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSS
T ss_pred cCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCC
Confidence 345899999999999985432 356666654 354 68899999999999999887776653
No 308
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.03 E-value=4e-06 Score=99.58 Aligned_cols=57 Identities=7% Similarity=0.088 Sum_probs=47.2
Q ss_pred cHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeecccc
Q psy2951 1246 GKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVL 1305 (1466)
Q Consensus 1246 ~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p 1305 (1466)
+..+...|.+.++++|++++.+++|+++.. +++. ..|++.+| ++.||.||+|+|...
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~-~~~~-~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRR-VDGA-WEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEE-ETTE-EEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEE-eCCe-EEEEeCCC-EEEcCEEEECCChhH
Confidence 356778888999999999999999999983 3333 66888887 899999999999743
No 309
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.01 E-value=3.5e-05 Score=92.17 Aligned_cols=57 Identities=21% Similarity=0.254 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeecccc
Q psy2951 1247 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVL 1305 (1466)
Q Consensus 1247 ~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p 1305 (1466)
..+...|.+.+++.|++++.+++|+++. .+++++..|.+.+| ++.+|.||+|+|...
T Consensus 174 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~-~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 174 DHVAWAFARKANEMGVDIIQNCEVTGFI-KDGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEE-ESSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEE-EeCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 4677888889999999999999999998 45566777888888 799999999999765
No 310
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.01 E-value=9.7e-06 Score=96.75 Aligned_cols=106 Identities=14% Similarity=0.174 Sum_probs=70.7
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCC---------------Cchhhc-------------cC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK---------------LSKQLD-------------IK 1117 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~---------------l~~~~~-------------~~ 1117 (1466)
+.+|+|||||++|+++|..|++.|. +|+|||+.+........ +...+. ..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~--~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGH--RVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHD 83 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC--CEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEET
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCC--cEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCC
Confidence 3689999999999999999999998 99999998653110000 000000 00
Q ss_pred c---cccc------------cc-------ChhhhccC-CcEEEcCCeEEEeecCCCC----eEEecCCcEEecCeEEEec
Q psy2951 1118 A---DSIL------------LR-------TEEFYKDN-DIHVIKGKKIISDSELNEK----KIKLQDGTSIDFTKIYLAT 1170 (1466)
Q Consensus 1118 ~---~~~~------------~~-------~~~~~~~~-~v~~~~~~~v~~i~d~~~~----~v~~~~g~~~~yd~lvlAt 1170 (1466)
. ..+. +. ..+.+.+. +++++.+++|+++ +.... .|++.+|+++.+|.||.|+
T Consensus 84 g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i-~~~~~~v~g~v~~~~g~~~~ad~vV~Ad 162 (399)
T 2x3n_A 84 GELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAV-QRDERHAIDQVRLNDGRVLRPRVVVGAD 162 (399)
T ss_dssp TEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEE-EECTTSCEEEEEETTSCEEEEEEEEECC
T ss_pred CCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEE-EEcCCceEEEEEECCCCEEECCEEEECC
Confidence 0 0000 00 01233344 8999999999999 65433 6778888899999999999
Q ss_pred CCCC
Q psy2951 1171 GSSP 1174 (1466)
Q Consensus 1171 G~~~ 1174 (1466)
|...
T Consensus 163 G~~s 166 (399)
T 2x3n_A 163 GIAS 166 (399)
T ss_dssp CTTC
T ss_pred CCCh
Confidence 9744
No 311
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.00 E-value=3.1e-05 Score=92.07 Aligned_cols=80 Identities=19% Similarity=0.254 Sum_probs=56.5
Q ss_pred CCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccCc
Q psy2951 757 VKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNT 836 (1466)
Q Consensus 757 g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 836 (1466)
+....++.+....+. +..+...+.+.+++.|++++.+++|++++..++ .+ .+.++++ ++.+|.||+|+|...+
T Consensus 134 ~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~-~~-~v~~~~g-~~~a~~vV~A~G~~~~- 206 (389)
T 2gf3_A 134 ENYNAIFEPNSGVLF---SENCIRAYRELAEARGAKVLTHTRVEDFDISPD-SV-KIETANG-SYTADKLIVSMGAWNS- 206 (389)
T ss_dssp TTEEEEEETTCEEEE---HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSS-CE-EEEETTE-EEEEEEEEECCGGGHH-
T ss_pred CCceEEEeCCCcEEe---HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCC-eE-EEEeCCC-EEEeCEEEEecCccHH-
Confidence 345666666543332 356777888889999999999999999985433 33 4666655 7999999999998654
Q ss_pred cccccCC
Q psy2951 837 NYLDGKG 843 (1466)
Q Consensus 837 ~~~~~~g 843 (1466)
.++...+
T Consensus 207 ~l~~~~g 213 (389)
T 2gf3_A 207 KLLSKLN 213 (389)
T ss_dssp HHGGGGT
T ss_pred HHhhhhc
Confidence 3444443
No 312
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.00 E-value=5.9e-06 Score=98.08 Aligned_cols=38 Identities=16% Similarity=0.221 Sum_probs=32.5
Q ss_pred CCCCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCC
Q psy2951 591 SSGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN 630 (1466)
Q Consensus 591 ~~~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~ 630 (1466)
+.+..+||+|||||++|+++|+.|+++|.+ |+++|+..
T Consensus 13 ~~~~~~dvvIIGgG~~Gl~~A~~La~~G~~--V~llE~~~ 50 (382)
T 1ryi_A 13 AMKRHYEAVVIGGGIIGSAIAYYLAKENKN--TALFESGT 50 (382)
T ss_dssp -CCSEEEEEEECCSHHHHHHHHHHHHTTCC--EEEECSSS
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHhCCCc--EEEEeCCC
Confidence 334568999999999999999999999987 88888864
No 313
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.00 E-value=3.3e-05 Score=98.59 Aligned_cols=68 Identities=10% Similarity=0.250 Sum_probs=52.9
Q ss_pred cHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCccccccCCce
Q psy2951 1246 GKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKGVE 1316 (1466)
Q Consensus 1246 ~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~ 1316 (1466)
+..+...|.+.+++.|++++++++|+++. .+++. ..|.+.+|.++.+|.||+|+|.... .++...+++
T Consensus 416 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~-~~~~~-v~V~t~~G~~i~Ad~VVlAtG~~s~-~l~~~~~lp 483 (676)
T 3ps9_A 416 PAELTRNVLELAQQQGLQIYYQYQLQNFS-RKDDC-WLLNFAGDQQATHSVVVLANGHQIS-RFSQTSTLP 483 (676)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEE-EETTE-EEEEETTSCEEEESEEEECCGGGGG-CSTTTTTCS
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeeeEEE-EeCCe-EEEEECCCCEEECCEEEECCCcchh-ccccccCCc
Confidence 36778888889999999999999999998 34444 4688888889999999999998643 344444443
No 314
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.98 E-value=5.2e-05 Score=89.83 Aligned_cols=58 Identities=17% Similarity=0.230 Sum_probs=48.8
Q ss_pred cHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeecccc
Q psy2951 1246 GKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVL 1305 (1466)
Q Consensus 1246 ~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p 1305 (1466)
+..+...|.+.+++.|++++.+++|++++ .+++.+..|.+.+| ++.||.||+|+|...
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~-~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFL-IENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEE-ESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEE-EECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 45677888888999999999999999998 45556666888887 899999999999765
No 315
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.98 E-value=8.3e-06 Score=97.59 Aligned_cols=109 Identities=17% Similarity=0.206 Sum_probs=66.2
Q ss_pred CCCCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCC---------------ccchhc------------
Q psy2951 591 SSGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRV---------------KLSKQL------------ 643 (1466)
Q Consensus 591 ~~~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~---------------~~~~~~------------ 643 (1466)
+...++||+|||||++|+++|+.|+++|++ |+++|+.+....... .+...+
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~~--V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~ 96 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGID--CDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAY 96 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCE--EEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCC--EEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEE
Confidence 344568999999999999999999999987 777777643210000 000000
Q ss_pred -ccC-c------------------------ccccccCHhHhhhCCcEEEEceEEEEeccc-cccEEEccCCCEEecCEEE
Q psy2951 644 -DIK-A------------------------DSILLRTEEFYKDNDIHVIKGKKIISDSEL-NEKKIKLQDGTSIDFTKIY 696 (1466)
Q Consensus 644 -~~~-~------------------------~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~-~~~~v~~~~~~~~~~d~lv 696 (1466)
... . ..+...+.+.+.+ ++++++++|+.+... +...+++.+|+++.+|.||
T Consensus 97 ~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV 174 (407)
T 3rp8_A 97 RDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLI 174 (407)
T ss_dssp EETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEE
T ss_pred EECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEE
Confidence 000 0 0011111122222 789999999888322 2345677788899999999
Q ss_pred EcCCCCC
Q psy2951 697 LATGSSP 703 (1466)
Q Consensus 697 iAtG~~~ 703 (1466)
.|.|...
T Consensus 175 ~AdG~~S 181 (407)
T 3rp8_A 175 AADGSHS 181 (407)
T ss_dssp ECCCTTC
T ss_pred ECCCcCh
Confidence 9999643
No 316
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.97 E-value=4.2e-05 Score=90.58 Aligned_cols=58 Identities=17% Similarity=0.249 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccC
Q psy2951 776 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLN 835 (1466)
Q Consensus 776 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 835 (1466)
..+...+.+.+++.|++++.++++++++.. ++.+..+.+.+| ++.+|.||+|+|....
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g-~i~a~~VV~A~G~~s~ 206 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKG-IIKTGIVVNATNAWAN 206 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTE-EEECSEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECCc-EEECCEEEECcchhHH
Confidence 556677888889999999999999999853 445655777777 8999999999997643
No 317
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.97 E-value=1.2e-05 Score=99.82 Aligned_cols=107 Identities=17% Similarity=0.266 Sum_probs=69.9
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCC--------------ccchhc-----------------
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRV--------------KLSKQL----------------- 643 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~--------------~~~~~~----------------- 643 (1466)
.+||+|||||+||+++|+.|+++|.+ |+++|+.+....... .+...+
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~--V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 100 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHD--VTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQ 100 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE--EEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCC--EEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecC
Confidence 58999999999999999999999987 888888743221110 000000
Q ss_pred -----------------------ccCcccccccCHhHhhhCCcEEEEceEEEEecc--ccccEEEcc-CC--CEEecCEE
Q psy2951 644 -----------------------DIKADSILLRTEEFYKDNDIHVIKGKKIISDSE--LNEKKIKLQ-DG--TSIDFTKI 695 (1466)
Q Consensus 644 -----------------------~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~~~~~v~~~-~~--~~~~~d~l 695 (1466)
..+...+...+.+.+.+.|++++.+++|+.+.. .....|.+. +| .++.+|.|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlV 180 (591)
T 3i3l_A 101 DQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFV 180 (591)
T ss_dssp SCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEE
T ss_pred CCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEE
Confidence 000111112223445568999999988988832 223456665 55 57999999
Q ss_pred EEcCCCCC
Q psy2951 696 YLATGSSP 703 (1466)
Q Consensus 696 viAtG~~~ 703 (1466)
|.|+|...
T Consensus 181 V~AdG~~S 188 (591)
T 3i3l_A 181 IDAGGSGG 188 (591)
T ss_dssp EECCGGGC
T ss_pred EECCCCcc
Confidence 99999654
No 318
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.97 E-value=1.3e-05 Score=102.51 Aligned_cols=46 Identities=9% Similarity=0.127 Sum_probs=34.9
Q ss_pred HhhhCCcEEEEceEEEEeccc-cccEEEccCCCEEecCEEEEcCCCC
Q psy2951 657 FYKDNDIHVIKGKKIISDSEL-NEKKIKLQDGTSIDFTKIYLATGSS 702 (1466)
Q Consensus 657 ~~~~~gv~~~~~~~v~~i~~~-~~~~v~~~~~~~~~~d~lviAtG~~ 702 (1466)
.+++.|++++++++|+.+... ....|.+.++.++.+|+||+|+|..
T Consensus 426 ~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~ 472 (676)
T 3ps9_A 426 LAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQ 472 (676)
T ss_dssp HHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGG
T ss_pred HHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcc
Confidence 345679999999999988322 2345666677889999999999964
No 319
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.96 E-value=1.8e-05 Score=93.92 Aligned_cols=98 Identities=19% Similarity=0.299 Sum_probs=78.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCccc----------------------------------------
Q psy2951 1205 ESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQES---------------------------------------- 1244 (1466)
Q Consensus 1205 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~---------------------------------------- 1244 (1466)
..+|+|||+|..|+.+|..|+++|.+|+++++.+.+....
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 4589999999999999999999999999999876431100
Q ss_pred -----------------------ccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEee
Q psy2951 1245 -----------------------LGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGI 1301 (1466)
Q Consensus 1245 -----------------------~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~ 1301 (1466)
-...+.+.|.+.+++.||+++++++|+++. .+++ ...|.+.+| ++.||.||+|+
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~-~~~~-~~~V~~~~g-~i~ad~VIlAt 183 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVE-RTAS-GFRVTTSAG-TVDAASLVVAS 183 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEE-EETT-EEEEEETTE-EEEESEEEECC
T ss_pred HHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEE-EeCC-EEEEEECCc-EEEeeEEEECC
Confidence 012566678888888999999999999997 3333 356888888 89999999999
Q ss_pred cccc
Q psy2951 1302 GTVL 1305 (1466)
Q Consensus 1302 G~~p 1305 (1466)
|..+
T Consensus 184 G~~S 187 (417)
T 3v76_A 184 GGKS 187 (417)
T ss_dssp CCSS
T ss_pred CCcc
Confidence 9876
No 320
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.96 E-value=1.4e-05 Score=99.76 Aligned_cols=39 Identities=21% Similarity=0.365 Sum_probs=33.6
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCC
Q psy2951 593 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLP 633 (1466)
Q Consensus 593 ~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~ 633 (1466)
...+||||||||+|||+||+.|+++|.+ |+++|+.+...
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~G~~--V~vlEk~~~~g 162 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDSGAK--VILIEKEPVIG 162 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHTTCC--EEEECSSSSSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCc--EEEEeCCCCCC
Confidence 3468999999999999999999999988 88888876543
No 321
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.95 E-value=2.4e-05 Score=94.57 Aligned_cols=59 Identities=24% Similarity=0.264 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHhcCcEEEccc---eEEEEEecCCCceEEEECCCCcEEecCEEEEccccccC
Q psy2951 776 KEVGERITKLFESKGVKFVMKA---NVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLN 835 (1466)
Q Consensus 776 ~~~~~~~~~~l~~~gv~~~~~~---~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 835 (1466)
..+...+.+.+++.|+++++++ +|+++.. +++++..|.+.+|+++.+|.||+|+|....
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~-~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIF-ENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEE-ETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEe-cCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 4667788888899999999999 9999984 345676688999989999999999997543
No 322
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.95 E-value=4.3e-05 Score=91.13 Aligned_cols=57 Identities=18% Similarity=0.240 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEc---CCCCeeecCEEEEeecccc
Q psy2951 1248 EVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANL---DNGTTIPADLVIVGIGTVL 1305 (1466)
Q Consensus 1248 ~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l---~~g~~i~~D~vv~a~G~~p 1305 (1466)
.+.+.|.+.+++.|++++.+++|++++ .+++.+..|.+ .++.++.+|+||.|.|...
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~-~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVI-KENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEE-EETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEE-EeCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 455677788888999999999999998 44556655666 4567899999999999765
No 323
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.95 E-value=6e-06 Score=102.27 Aligned_cols=39 Identities=26% Similarity=0.432 Sum_probs=34.5
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD 635 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~ 635 (1466)
.+||+|||||+|||+||+.|+++|++ |+++|+++.+++.
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~--V~vlE~~~~~GGr 42 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLN--VVVLEARDRVGGR 42 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCC--EEEECSSSSSBTT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCC--EEEEeCCCCCCCc
Confidence 57999999999999999999999987 8899998776543
No 324
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.95 E-value=1.1e-05 Score=99.94 Aligned_cols=108 Identities=15% Similarity=0.171 Sum_probs=67.6
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCC------------------------------Cc-cch-
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDR------------------------------VK-LSK- 641 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~------------------------------~~-~~~- 641 (1466)
..+||+||||||+|+++|+.|+++|.+ |+++|+.+...... .. +..
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~--V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 125 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVG--ALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGI 125 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCC--EEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTB
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC--EEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCc
Confidence 357999999999999999999999988 77788764322000 00 000
Q ss_pred ---hcc-------------cCcccccccCHhHhhhCCcEEEEceEEEEeccc-cccEEEc--cCC-CEEecCEEEEcCCC
Q psy2951 642 ---QLD-------------IKADSILLRTEEFYKDNDIHVIKGKKIISDSEL-NEKKIKL--QDG-TSIDFTKIYLATGS 701 (1466)
Q Consensus 642 ---~~~-------------~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~-~~~~v~~--~~~-~~~~~d~lviAtG~ 701 (1466)
.+. .....+...+.+.+.+.|++++++++|+.+... +..++++ .+| .++++|+||.|.|.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~ 205 (570)
T 3fmw_A 126 FTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGG 205 (570)
T ss_dssp CTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCS
T ss_pred ccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCC
Confidence 000 000111112233445569999999999988322 2334555 567 68999999999996
Q ss_pred CC
Q psy2951 702 SP 703 (1466)
Q Consensus 702 ~~ 703 (1466)
..
T Consensus 206 ~S 207 (570)
T 3fmw_A 206 RS 207 (570)
T ss_dssp SC
T ss_pred Cc
Confidence 54
No 325
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.94 E-value=1.9e-05 Score=91.81 Aligned_cols=105 Identities=13% Similarity=0.172 Sum_probs=65.7
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCc--------------c---c----hhcc---c-----
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK--------------L---S----KQLD---I----- 645 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~--------------~---~----~~~~---~----- 645 (1466)
++||+|||||++|+++|+.|++.|.+ |+++|+.+..+..... + . ..+. .
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~--V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQ--VHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVA 79 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCC--EEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCc--EEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCee
Confidence 36999999999999999999999987 8888887543211000 0 0 0000 0
Q ss_pred ---------Cc-------c---ccc--ccCHhHhh--hCCcEEEEceEEEEecc-ccccEEEccCCCEEe-cCEEEEcCC
Q psy2951 646 ---------KA-------D---SIL--LRTEEFYK--DNDIHVIKGKKIISDSE-LNEKKIKLQDGTSID-FTKIYLATG 700 (1466)
Q Consensus 646 ---------~~-------~---~~~--~~~~~~~~--~~gv~~~~~~~v~~i~~-~~~~~v~~~~~~~~~-~d~lviAtG 700 (1466)
.. . .+. ..+....+ ..+++++++++|+.+.. .+...+++.+|..+. +|+||+|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g 159 (336)
T 1yvv_A 80 EWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRGDMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATP 159 (336)
T ss_dssp EECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHTTCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSC
T ss_pred eccccceeccCcccccCCCCCccEEcCccHHHHHHHHHccCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCC
Confidence 00 0 000 00111111 12889999999998832 234567777787664 999999999
Q ss_pred C
Q psy2951 701 S 701 (1466)
Q Consensus 701 ~ 701 (1466)
.
T Consensus 160 ~ 160 (336)
T 1yvv_A 160 A 160 (336)
T ss_dssp H
T ss_pred H
Confidence 5
No 326
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.93 E-value=9.9e-06 Score=96.70 Aligned_cols=36 Identities=28% Similarity=0.503 Sum_probs=31.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFL 632 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~ 632 (1466)
.+||+||||||||+++|+.|+++|++ |+++|+.+.+
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~--V~v~Er~~~~ 39 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLK--TLMIEKRPEI 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC--EEEECSSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCc--EEEEeCCCCC
Confidence 48999999999999999999999998 7888876543
No 327
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.93 E-value=7.9e-06 Score=101.26 Aligned_cols=110 Identities=15% Similarity=0.205 Sum_probs=66.4
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCC----------------------------------CCCC--
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLP----------------------------------YDRV-- 85 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~----------------------------------~~~~-- 85 (1466)
.++||+||||||+|+++|..|++.|.+|.|+|........ +...
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 127 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFT 127 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccc
Confidence 4589999999999999999999999998887644322100 0000
Q ss_pred -ccch-hcc--------cCcccccccChhhhhcCCeEEEeCceEEEecc-ccccEEEe--cCC-cEEecCEEEEccCCCC
Q psy2951 86 -KLSK-QLD--------IKADSILLRTEEFYKDNDIHVIKGKKIISDSE-LNEKKIKL--QDG-TSIDFTKIYLATGSSP 151 (1466)
Q Consensus 86 -~~~~-~~~--------~~~~~~~~~~~~~~~~~~v~~~~~~~v~~~~~-~~~~~v~~--~~~-~~~~~d~lviAtG~~~ 151 (1466)
.+.. ... .....+...+.+.+++.+++++.++.+..... .+..++++ .++ .++.+|+||.|.|.+.
T Consensus 128 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 128 QGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp TCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSC
T ss_pred ccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 0000 000 00011111223344456899999988775332 23445666 566 6899999999999764
No 328
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.92 E-value=2.1e-05 Score=100.48 Aligned_cols=56 Identities=9% Similarity=0.193 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCCeEEEEcCCCc-EEeccEEEEeeccc
Q psy2951 224 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGT-TIPADLVIVGIGTV 281 (1466)
Q Consensus 224 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~v~~~~g~-~i~~D~Vi~a~G~~ 281 (1466)
..+...+.+.+++.|++++++++|+++..+++ .+ .+.+.+|. ++.+|.||+|+|..
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~-~v-~V~t~~G~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRIDS-QW-QLTFGQSQAAKHHATVILATGHR 468 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECSS-SE-EEEEC-CCCCEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCC-eE-EEEeCCCcEEEECCEEEECCCcc
Confidence 67788888889999999999999999987653 33 57777777 89999999999976
No 329
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.92 E-value=1.8e-05 Score=97.45 Aligned_cols=108 Identities=18% Similarity=0.260 Sum_probs=69.0
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCc---------------cchhcc---------------
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVK---------------LSKQLD--------------- 644 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~---------------~~~~~~--------------- 644 (1466)
.+||+|||||+||+++|+.|+++|++ |+++|+.......... +...+.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~--V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~ 84 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHR--VLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWG 84 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCC--EEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCC--EEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEec
Confidence 47999999999999999999999987 8888887522211000 000000
Q ss_pred -----------------------cCcccccccCHhHhhhCCcEEEEceEEEEecccccc-----EEEccCCC--EEecCE
Q psy2951 645 -----------------------IKADSILLRTEEFYKDNDIHVIKGKKIISDSELNEK-----KIKLQDGT--SIDFTK 694 (1466)
Q Consensus 645 -----------------------~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~-----~v~~~~~~--~~~~d~ 694 (1466)
.+...+...+.+.+.+.|++++.+++|+.+ ..+.. .+...+|. ++.+|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v-~~~~~~v~gv~~~~~dG~~~~i~ad~ 163 (512)
T 3e1t_A 85 KEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDV-LFEGERAVGVRYRNTEGVELMAHARF 163 (512)
T ss_dssp SCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEE-EEETTEEEEEEEECSSSCEEEEEEEE
T ss_pred CCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEE-EEECCEEEEEEEEeCCCCEEEEEcCE
Confidence 000011111233455679999999999988 33332 23334564 799999
Q ss_pred EEEcCCCCCCc
Q psy2951 695 IYLATGSSPRT 705 (1466)
Q Consensus 695 lviAtG~~~~~ 705 (1466)
||.|+|.....
T Consensus 164 VI~AdG~~S~v 174 (512)
T 3e1t_A 164 IVDASGNRTRV 174 (512)
T ss_dssp EEECCCTTCSS
T ss_pred EEECCCcchHH
Confidence 99999975443
No 330
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.92 E-value=1.4e-05 Score=92.98 Aligned_cols=104 Identities=14% Similarity=0.231 Sum_probs=66.5
Q ss_pred CeEEEEcCchHHHHHHHHHHH---cCCCccEEEEcCCCCCCCCCCccc-------------hhcccCcc-----------
Q psy2951 596 DTFIVVGGGPSGATCVETLRQ---NGFTGKLYFITDENFLPYDRVKLS-------------KQLDIKAD----------- 648 (1466)
Q Consensus 596 ~~vvVIGgG~AGl~aA~~l~~---~g~~~~v~~~~~~~~~~~~~~~~~-------------~~~~~~~~----------- 648 (1466)
+||+|||||++|+++|+.|++ .|++ |+++|+....++...... ..+.....
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~--V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 79 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLY--LAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDE 79 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEE--EEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCce--EEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHH
Confidence 689999999999999999999 8876 888888754332111000 00000000
Q ss_pred ----cc-------------------------cccC-HhHhhhCCcEEEEceEEEEeccc-cccEEEccCCCEEecCEEEE
Q psy2951 649 ----SI-------------------------LLRT-EEFYKDNDIHVIKGKKIISDSEL-NEKKIKLQDGTSIDFTKIYL 697 (1466)
Q Consensus 649 ----~~-------------------------~~~~-~~~~~~~gv~~~~~~~v~~i~~~-~~~~v~~~~~~~~~~d~lvi 697 (1466)
.+ ...+ ....+..|++++++++|+.+... +...|++.+|..+.+|+||+
T Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~ 159 (342)
T 3qj4_A 80 LLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVL 159 (342)
T ss_dssp HHHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEE
T ss_pred HHhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEE
Confidence 00 0000 11222338999999999998322 34567777787789999999
Q ss_pred cCCC
Q psy2951 698 ATGS 701 (1466)
Q Consensus 698 AtG~ 701 (1466)
|+..
T Consensus 160 A~p~ 163 (342)
T 3qj4_A 160 TMPV 163 (342)
T ss_dssp CSCH
T ss_pred CCCH
Confidence 9983
No 331
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.91 E-value=4.8e-06 Score=101.16 Aligned_cols=59 Identities=22% Similarity=0.315 Sum_probs=48.4
Q ss_pred cHHHHHHHHHHHHhCCcEEEcCceEEEEEec--------------CCCcEEEEEcCCCCee--ecCEEEEeecccc
Q psy2951 1246 GKEVGERITKLFESKGVKFVMKANVSSFEKN--------------EKNDVTAANLDNGTTI--PADLVIVGIGTVL 1305 (1466)
Q Consensus 1246 ~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~--------------~~g~~~~v~l~~g~~i--~~D~vv~a~G~~p 1305 (1466)
+..+...|.+.++++|++++.+++|+++... +++++..|.+.+| ++ .||.||+|+|...
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 3578888999999999999999999999831 3445667888888 68 9999999999753
No 332
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.91 E-value=1.7e-05 Score=98.57 Aligned_cols=109 Identities=14% Similarity=0.130 Sum_probs=70.3
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCC-------------------------------CC-----
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD-------------------------------RV----- 637 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~-------------------------------~~----- 637 (1466)
..++|+||||||+|+++|+.|+++|.+ |+++|+.+..... ..
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~--v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 81 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVR--VLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVI 81 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCC--EEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEE
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCC--EEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceee
Confidence 458999999999999999999999987 7888876432100 00
Q ss_pred -cc----chhc--------------c---------cCcccccccCHhHhhhCCcEEEEceEEEEecccc-----ccEEEc
Q psy2951 638 -KL----SKQL--------------D---------IKADSILLRTEEFYKDNDIHVIKGKKIISDSELN-----EKKIKL 684 (1466)
Q Consensus 638 -~~----~~~~--------------~---------~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~-----~~~v~~ 684 (1466)
.. ...+ . .+...+...+.+.+.+.|++++++++|+.+.... ..++++
T Consensus 82 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~ 161 (535)
T 3ihg_A 82 RLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARL 161 (535)
T ss_dssp EEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEE
T ss_pred eEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEE
Confidence 00 0000 0 0011111222344556799999999999883222 234555
Q ss_pred cCC---CEEecCEEEEcCCCCCC
Q psy2951 685 QDG---TSIDFTKIYLATGSSPR 704 (1466)
Q Consensus 685 ~~~---~~~~~d~lviAtG~~~~ 704 (1466)
.++ .++.+|+||.|+|....
T Consensus 162 ~~~~~~~~i~a~~vV~AdG~~S~ 184 (535)
T 3ihg_A 162 AGPDGEYDLRAGYLVGADGNRSL 184 (535)
T ss_dssp EETTEEEEEEEEEEEECCCTTCH
T ss_pred EcCCCeEEEEeCEEEECCCCcch
Confidence 555 68999999999997543
No 333
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.91 E-value=0.0001 Score=94.03 Aligned_cols=66 Identities=9% Similarity=0.190 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCc-EEecCEEEEccccccCccccccCCc
Q psy2951 776 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGT-TIPADLVIVGIGTVLNTNYLDGKGV 844 (1466)
Q Consensus 776 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~-~i~~D~vi~a~G~~p~~~~~~~~gl 844 (1466)
..+...+.+.+++.|++++++++|+++...++ . ..|.+.+|. ++.+|.||+|+|.... .++...++
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~-~-v~V~t~~G~~~i~Ad~VVlAtG~~s~-~l~~~~~l 478 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRIDS-Q-WQLTFGQSQAAKHHATVILATGHRLP-EWEQTHHL 478 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECSS-S-EEEEEC-CCCCEEESEEEECCGGGTT-CSTTTTTS
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCC-e-EEEEeCCCcEEEECCEEEECCCcchh-ccccccCC
Confidence 56777888888999999999999999985433 3 367788877 8999999999998643 44444333
No 334
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.90 E-value=2.6e-05 Score=92.84 Aligned_cols=108 Identities=17% Similarity=0.161 Sum_probs=68.9
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCC-CC--ccch-------hcc-----------------c-
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD-RV--KLSK-------QLD-----------------I- 645 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~-~~--~~~~-------~~~-----------------~- 645 (1466)
..++|+|||||++|+++|..|++.|++ |+++|+.+..... .. .+.. .++ .
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~--v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 81 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVD--VDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDAL 81 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCE--EEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCC--EEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecC
Confidence 358999999999999999999999987 7888876542110 00 0000 000 0
Q ss_pred Ccccc---------c--ccCHhHhhh--CCcEEEEceEEEEecc-ccccEEEccCCCEEecCEEEEcCCCCC
Q psy2951 646 KADSI---------L--LRTEEFYKD--NDIHVIKGKKIISDSE-LNEKKIKLQDGTSIDFTKIYLATGSSP 703 (1466)
Q Consensus 646 ~~~~~---------~--~~~~~~~~~--~gv~~~~~~~v~~i~~-~~~~~v~~~~~~~~~~d~lviAtG~~~ 703 (1466)
....+ . ..+.+.+.+ .+++++++++|+++.. .+...+++.+|.++.+|.||.|+|...
T Consensus 82 ~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 82 TGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGAS 153 (397)
T ss_dssp TCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTC
T ss_pred CCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcch
Confidence 00000 0 001122222 3889999999988832 234567778888999999999999654
No 335
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.90 E-value=1.2e-05 Score=97.54 Aligned_cols=107 Identities=16% Similarity=0.208 Sum_probs=67.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCC--CCCCcc--c----hhcc----------------------
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLP--YDRVKL--S----KQLD---------------------- 644 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~--~~~~~~--~----~~~~---------------------- 644 (1466)
.+||+||||||||+++|+.|+++|++ |+++|+.+... ...+.. . ..++
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~--V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 83 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLK--ILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPD 83 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCC--EEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCC--EEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCC
Confidence 47999999999999999999999988 78888765321 100000 0 0000
Q ss_pred -------------cCcccccccCHhHhhhCCcEEEEceEEEEeccccccE---EEcc---CCC--EEecCEEEEcCCCCC
Q psy2951 645 -------------IKADSILLRTEEFYKDNDIHVIKGKKIISDSELNEKK---IKLQ---DGT--SIDFTKIYLATGSSP 703 (1466)
Q Consensus 645 -------------~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~---v~~~---~~~--~~~~d~lviAtG~~~ 703 (1466)
.+...+...+.+.+.+.|++++.+++|+.+ ..++.. |++. +|+ ++.+|.||.|+|...
T Consensus 84 ~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i-~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 84 MQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKP-IFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp SSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEE-EEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred CceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEE-EEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 000011111223345579999999999888 433332 3343 555 799999999999644
Q ss_pred C
Q psy2951 704 R 704 (1466)
Q Consensus 704 ~ 704 (1466)
.
T Consensus 163 ~ 163 (453)
T 3atr_A 163 S 163 (453)
T ss_dssp T
T ss_pred h
Confidence 3
No 336
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.90 E-value=8.1e-06 Score=97.68 Aligned_cols=37 Identities=24% Similarity=0.380 Sum_probs=31.0
Q ss_pred CCCCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcC
Q psy2951 40 SGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITD 76 (1466)
Q Consensus 40 ~~~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~ 76 (1466)
..+++||+||||||+|+++|+.|++.|.+|.|+|...
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3457899999999999999999999999988877554
No 337
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.89 E-value=1.2e-05 Score=93.67 Aligned_cols=103 Identities=17% Similarity=0.249 Sum_probs=67.3
Q ss_pred CcEEEECCchHHHHHHHHHHh---cCCCCcEEEEcCCCCCCCCCC---------------CC-----ch---hh----c-
Q psy2951 1067 DTFIVVGGGPSGATCVETLRQ---NGFTGKLYFITDENFLPYDRV---------------KL-----SK---QL----D- 1115 (1466)
Q Consensus 1067 ~~vvIVG~G~aGl~aA~~L~~---~g~~~~i~li~~~~~~~~~~~---------------~l-----~~---~~----~- 1115 (1466)
++|+|||||++|+++|..|++ .|. +|+|||+++..+.... .. .. .+ .
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~--~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~ 79 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPL--YLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDE 79 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCE--EEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCc--eEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHH
Confidence 589999999999999999999 888 9999999864331100 00 00 00 0
Q ss_pred ----cCccccc--------------c--c--C----hhhhccCCcEEEcCCeEEEeecCCCC--eEEecCCcEEecCeEE
Q psy2951 1116 ----IKADSIL--------------L--R--T----EEFYKDNDIHVIKGKKIISDSELNEK--KIKLQDGTSIDFTKIY 1167 (1466)
Q Consensus 1116 ----~~~~~~~--------------~--~--~----~~~~~~~~v~~~~~~~v~~i~d~~~~--~v~~~~g~~~~yd~lv 1167 (1466)
....... . . . ..+.+..+++++++++|++| ..... +|.+++|..+.+|.||
T Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i-~~~~~~~~v~~~~g~~~~ad~vV 158 (342)
T 3qj4_A 80 LLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQI-NLRDDKWEVSKQTGSPEQFDLIV 158 (342)
T ss_dssp HHHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEE-EECSSSEEEEESSSCCEEESEEE
T ss_pred HHhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEE-EEcCCEEEEEECCCCEEEcCEEE
Confidence 0000000 0 0 0 01222237899999999999 65433 5777788889999999
Q ss_pred EecCC
Q psy2951 1168 LATGS 1172 (1466)
Q Consensus 1168 lAtG~ 1172 (1466)
+|+..
T Consensus 159 ~A~p~ 163 (342)
T 3qj4_A 159 LTMPV 163 (342)
T ss_dssp ECSCH
T ss_pred ECCCH
Confidence 99974
No 338
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.88 E-value=1.7e-05 Score=98.92 Aligned_cols=38 Identities=18% Similarity=0.410 Sum_probs=33.2
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCC
Q psy2951 593 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFL 632 (1466)
Q Consensus 593 ~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~ 632 (1466)
....||||||||+|||+||+.|+++|.+ |+++|+.+..
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~--V~vlEk~~~~ 156 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGAN--VILVDKAPFS 156 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCC--EEEECSSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCc--EEEEeCCCCC
Confidence 3467999999999999999999999987 8888887644
No 339
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.87 E-value=2.9e-05 Score=94.87 Aligned_cols=110 Identities=14% Similarity=0.226 Sum_probs=69.2
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCC---------------Cccchh-----------cc-
Q psy2951 592 SGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDR---------------VKLSKQ-----------LD- 644 (1466)
Q Consensus 592 ~~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~---------------~~~~~~-----------~~- 644 (1466)
.+..++|+||||||+|+++|..|+++|.+ |+++|+.+...... ..+... +.
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~--v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~ 86 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRLGGVD--VMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGG 86 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCC--EEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETT
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCC--EEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecc
Confidence 34578999999999999999999999988 77777754322100 000000 00
Q ss_pred --cC---------------cccccccCHhHhhhCCcEEEEceEEEEeccc-cccEEEccCCC---EEecCEEEEcCCCCC
Q psy2951 645 --IK---------------ADSILLRTEEFYKDNDIHVIKGKKIISDSEL-NEKKIKLQDGT---SIDFTKIYLATGSSP 703 (1466)
Q Consensus 645 --~~---------------~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~-~~~~v~~~~~~---~~~~d~lviAtG~~~ 703 (1466)
.+ ...+...+.+.+.+.|++++++++|+++... +..++++.++. ++++|+||.|.|...
T Consensus 87 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 87 RPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp EEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred eecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCccc
Confidence 00 0001111223345679999999999988322 23456666654 799999999999653
No 340
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.86 E-value=2.3e-05 Score=93.32 Aligned_cols=108 Identities=15% Similarity=0.184 Sum_probs=69.9
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCC------CCCC-----------Cccchhc--------------
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFL------PYDR-----------VKLSKQL-------------- 643 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~------~~~~-----------~~~~~~~-------------- 643 (1466)
.+||+|||||++|+++|+.|++.|.+ |+++|+.+.. .... ..+...+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~--v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~ 79 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGID--NVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAF 79 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCC--EEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCC--EEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEE
Confidence 36899999999999999999999988 7888876421 0000 0000000
Q ss_pred -------c------------cCcccccccCHhHhhhCCcEEEEceEEEEeccc--cccEEEc-cCCC--EEecCEEEEcC
Q psy2951 644 -------D------------IKADSILLRTEEFYKDNDIHVIKGKKIISDSEL--NEKKIKL-QDGT--SIDFTKIYLAT 699 (1466)
Q Consensus 644 -------~------------~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~--~~~~v~~-~~~~--~~~~d~lviAt 699 (1466)
. .....+...+.+.+.+.|++++++++|+.+... ....+++ .+|. ++.+|.||.|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~Ad 159 (394)
T 1k0i_A 80 AGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCD 159 (394)
T ss_dssp TTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECC
T ss_pred CCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECC
Confidence 0 000111122233445679999999999988332 2356766 6776 79999999999
Q ss_pred CCCCC
Q psy2951 700 GSSPR 704 (1466)
Q Consensus 700 G~~~~ 704 (1466)
|....
T Consensus 160 G~~S~ 164 (394)
T 1k0i_A 160 GFHGI 164 (394)
T ss_dssp CTTCS
T ss_pred CCCcH
Confidence 96544
No 341
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.86 E-value=2.4e-05 Score=93.22 Aligned_cols=109 Identities=19% Similarity=0.280 Sum_probs=67.3
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCC----CCccch--------hcc-----------------
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD----RVKLSK--------QLD----------------- 644 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~----~~~~~~--------~~~----------------- 644 (1466)
..++|+|||||++|+++|+.|++.|.+ |+++|+.+..... ...+.. .++
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~--v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~ 102 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGID--VSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIA 102 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCE--EEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCC--EEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEE
Confidence 457999999999999999999999987 7777776432211 000000 000
Q ss_pred -cCcccccc-----------------cCHhHhhhC--CcEEEEceEEEEeccc-cccEEEccCCCEEecCEEEEcCCCCC
Q psy2951 645 -IKADSILL-----------------RTEEFYKDN--DIHVIKGKKIISDSEL-NEKKIKLQDGTSIDFTKIYLATGSSP 703 (1466)
Q Consensus 645 -~~~~~~~~-----------------~~~~~~~~~--gv~~~~~~~v~~i~~~-~~~~v~~~~~~~~~~d~lviAtG~~~ 703 (1466)
.....+.. .+.+.+.+. +++++++++|+.+... +...+++.+|.++.+|.||.|+|...
T Consensus 103 ~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 103 DEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp CSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTC
T ss_pred CCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcch
Confidence 00000000 001112111 4678899999888322 23467778888999999999999654
Q ss_pred C
Q psy2951 704 R 704 (1466)
Q Consensus 704 ~ 704 (1466)
.
T Consensus 183 ~ 183 (398)
T 2xdo_A 183 K 183 (398)
T ss_dssp S
T ss_pred h
Confidence 3
No 342
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.85 E-value=3e-05 Score=94.79 Aligned_cols=110 Identities=14% Similarity=0.208 Sum_probs=69.1
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCC---------------Cccchhc-----------c-
Q psy2951 592 SGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDR---------------VKLSKQL-----------D- 644 (1466)
Q Consensus 592 ~~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~---------------~~~~~~~-----------~- 644 (1466)
.+..++|+||||||+|+++|..|+++|.+ |+++|+.+...... ..+...+ .
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~--v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~ 85 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVE--VVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGG 85 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCC--EEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETT
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCC--EEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccc
Confidence 34568999999999999999999999988 77777654321000 0000000 0
Q ss_pred --cC---------------cccccccCHhHhhhCCcEEEEceEEEEeccc-cccEEEccCCC---EEecCEEEEcCCCCC
Q psy2951 645 --IK---------------ADSILLRTEEFYKDNDIHVIKGKKIISDSEL-NEKKIKLQDGT---SIDFTKIYLATGSSP 703 (1466)
Q Consensus 645 --~~---------------~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~-~~~~v~~~~~~---~~~~d~lviAtG~~~ 703 (1466)
.+ ...+...+.+.+.+.|++++++++|+++... +..++++.++. ++++|+||.|.|...
T Consensus 86 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 86 LPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp EEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTC
T ss_pred eecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcch
Confidence 00 0001111223345679999999999988322 23345555554 799999999999653
No 343
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.84 E-value=4.7e-05 Score=90.65 Aligned_cols=106 Identities=22% Similarity=0.302 Sum_probs=68.4
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCC-C---CCc----h-hhc--c----------Cc------
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDR-V---KLS----K-QLD--I----------KA------ 1118 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~-~---~l~----~-~~~--~----------~~------ 1118 (1466)
..+|+|||||++|+++|..|++.|. +|+|||+.+...... . .+. . .+. . ..
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~--~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~ 103 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGI--DVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIAD 103 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC--EEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC--CEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEEC
Confidence 4689999999999999999999998 999999986532210 0 000 0 000 0 00
Q ss_pred --cccccc---C---------------hhhhcc--CCcEEEcCCeEEEeecCCCC--eEEecCCcEEecCeEEEecCCCC
Q psy2951 1119 --DSILLR---T---------------EEFYKD--NDIHVIKGKKIISDSELNEK--KIKLQDGTSIDFTKIYLATGSSP 1174 (1466)
Q Consensus 1119 --~~~~~~---~---------------~~~~~~--~~v~~~~~~~v~~i~d~~~~--~v~~~~g~~~~yd~lvlAtG~~~ 1174 (1466)
...... + .+.+.+ .+++++++++|+++ +.... +|++.+|.++.+|.||.|+|...
T Consensus 104 ~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i-~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 104 EKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVML-EPGKKKWTLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp SSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEE-EECSSSEEEEETTSCCEEESEEEECSCTTC
T ss_pred CCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEE-EECCCEEEEEECCCcEEecCEEEECCCcch
Confidence 000000 0 001111 13578889999999 65433 57778898999999999999744
No 344
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.83 E-value=7.4e-05 Score=88.77 Aligned_cols=80 Identities=18% Similarity=0.244 Sum_probs=57.1
Q ss_pred CCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCc
Q psy2951 1228 VKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNT 1307 (1466)
Q Consensus 1228 g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~ 1307 (1466)
+....++.+....+. +..+...|.+.++++|++++.+++|++++. +++. ..|.+.+| ++.+|.||+|+|...+
T Consensus 134 ~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~-~~~~-~~v~~~~g-~~~a~~vV~A~G~~~~- 206 (389)
T 2gf3_A 134 ENYNAIFEPNSGVLF---SENCIRAYRELAEARGAKVLTHTRVEDFDI-SPDS-VKIETANG-SYTADKLIVSMGAWNS- 206 (389)
T ss_dssp TTEEEEEETTCEEEE---HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-CSSC-EEEEETTE-EEEEEEEEECCGGGHH-
T ss_pred CCceEEEeCCCcEEe---HHHHHHHHHHHHHHCCCEEEcCcEEEEEEe-cCCe-EEEEeCCC-EEEeCEEEEecCccHH-
Confidence 345666666543332 467788889999999999999999999983 3333 34677666 7999999999997653
Q ss_pred cccccCC
Q psy2951 1308 NYLDGKG 1314 (1466)
Q Consensus 1308 ~~~~~~g 1314 (1466)
.++...+
T Consensus 207 ~l~~~~g 213 (389)
T 2gf3_A 207 KLLSKLN 213 (389)
T ss_dssp HHGGGGT
T ss_pred HHhhhhc
Confidence 3444433
No 345
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.83 E-value=1.7e-05 Score=94.71 Aligned_cols=106 Identities=15% Similarity=0.171 Sum_probs=67.4
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCC-Cc------cchhcc-------------------cCcc
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDR-VK------LSKQLD-------------------IKAD 648 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~-~~------~~~~~~-------------------~~~~ 648 (1466)
.+||+|||||+||+++|+.|+++|.+ |+++|+....+... +. ....++ ....
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~--V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 81 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLK--TLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEK 81 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC--EEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCC--EEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCC
Confidence 47999999999999999999999987 88888875332100 00 000000 0000
Q ss_pred ---------------------cccccCHhHhhhCCcEEEEceEEEEeccccccE---EEc---cCCCEEecCEEEEcCCC
Q psy2951 649 ---------------------SILLRTEEFYKDNDIHVIKGKKIISDSELNEKK---IKL---QDGTSIDFTKIYLATGS 701 (1466)
Q Consensus 649 ---------------------~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~---v~~---~~~~~~~~d~lviAtG~ 701 (1466)
.+...+.+.+.+.|++++.+++|+.+ ..++.. |.+ .++.++++|.||.|+|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i-~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~ 160 (397)
T 3cgv_A 82 RPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGV-IKENGKVAGAKIRHNNEIVDVRAKMVIAADGF 160 (397)
T ss_dssp SCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEE-EEETTEEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred EEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEE-EEeCCEEEEEEEEECCeEEEEEcCEEEECCCc
Confidence 01111223344569999999989888 333332 444 24568999999999996
Q ss_pred CC
Q psy2951 702 SP 703 (1466)
Q Consensus 702 ~~ 703 (1466)
..
T Consensus 161 ~s 162 (397)
T 3cgv_A 161 ES 162 (397)
T ss_dssp TC
T ss_pred ch
Confidence 54
No 346
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.81 E-value=4.3e-05 Score=91.79 Aligned_cols=60 Identities=15% Similarity=0.245 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCcccc
Q psy2951 1247 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYL 1310 (1466)
Q Consensus 1247 ~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~~~~ 1310 (1466)
..+.+.|.+.++++|++++++++|++|. .+++++ | ..+|+++.||.||+++|......++
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~-~~~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~~ll 248 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEIN-IEEKKV--Y-TRDNEEYSFDVAISNVGVRETVKLI 248 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEE-TTTTEE--E-ETTCCEEECSEEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEE-EECCEE--E-EeCCcEEEeCEEEECCCHHHHHHhc
Confidence 5678889999999999999999999998 455554 5 5678899999999999975443333
No 347
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.80 E-value=2.1e-05 Score=96.89 Aligned_cols=35 Identities=29% Similarity=0.387 Sum_probs=30.7
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcC
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITD 76 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~ 76 (1466)
.++||+|||||+||+++|+.|++.|++|.|+|...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 35899999999999999999999999988876543
No 348
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.79 E-value=1.8e-05 Score=98.28 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=30.9
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcC
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITD 76 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~ 76 (1466)
.++||+||||||+|+++|+.|+++|.++.|+|...
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~ 38 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRP 38 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 46899999999999999999999999988876543
No 349
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.79 E-value=3.1e-05 Score=96.42 Aligned_cols=36 Identities=19% Similarity=0.535 Sum_probs=31.6
Q ss_pred CCeEEEEcCchHHHHHHHHHHHc------CCCccEEEEcCCCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQN------GFTGKLYFITDENFL 632 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~------g~~~~v~~~~~~~~~ 632 (1466)
.+||+||||||||+++|+.|+++ |.+ |+++|+.+..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~--V~vlEk~~~~ 76 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLR--VCLVEKAAHI 76 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCC--EEEECSSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCc--EEEEeCCCCC
Confidence 47999999999999999999999 877 8888887543
No 350
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.79 E-value=1.3e-05 Score=96.50 Aligned_cols=60 Identities=15% Similarity=0.249 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccCcccc
Q psy2951 776 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYL 839 (1466)
Q Consensus 776 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~~ 839 (1466)
..+.+.+.+.+++.|++++++++|++|.. +++++ + ..+|+++.+|.||+|+|......++
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~-~~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~~ll 248 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINI-EEKKV--Y-TRDNEEYSFDVAISNVGVRETVKLI 248 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEET-TTTEE--E-ETTCCEEECSEEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEE-ECCEE--E-EeCCcEEEeCEEEECCCHHHHHHhc
Confidence 56778888999999999999999999984 34444 4 4567899999999999976443333
No 351
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.78 E-value=0.00015 Score=86.30 Aligned_cols=98 Identities=19% Similarity=0.228 Sum_probs=74.5
Q ss_pred eEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcc-------------------------------------------
Q psy2951 1207 NVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQE------------------------------------------- 1243 (1466)
Q Consensus 1207 ~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~------------------------------------------- 1243 (1466)
.|+|||+|+.|+-+|..|+++|.+|+|+++.+.+-..
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPII 85 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceEee
Confidence 5999999999999999999999999999986432000
Q ss_pred ------------ccc-HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcC-CC--CeeecCEEEEeecccc
Q psy2951 1244 ------------SLG-KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLD-NG--TTIPADLVIVGIGTVL 1305 (1466)
Q Consensus 1244 ------------~~~-~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~-~g--~~i~~D~vv~a~G~~p 1305 (1466)
.+. ..+...|.+..++.|++++.+++++.+. .+++.+..+... ++ .++.+|+||-|.|...
T Consensus 86 ~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~-~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 86 LQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVI-KENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEE-EETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred ccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeee-eccceeeeeeecccccceEEEEeEEEeCCcccc
Confidence 000 3456678888889999999999999987 455566555433 33 4689999999999643
No 352
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.71 E-value=0.00012 Score=88.86 Aligned_cols=66 Identities=24% Similarity=0.346 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHhcCcEEEccceEEEEEec--------------CCCceEEEECCCCcEE--ecCEEEEccccccCcccc
Q psy2951 776 KEVGERITKLFESKGVKFVMKANVSSFEKN--------------EKNDVTAANLDNGTTI--PADLVIVGIGTVLNTNYL 839 (1466)
Q Consensus 776 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~--------------~~~~~~~v~~~~g~~i--~~D~vi~a~G~~p~~~~~ 839 (1466)
..+...+.+.+++.|++++.+++|+++... +++++..+.+.+| ++ .+|.||+|+|.... .++
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~-~l~ 258 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSN-RLL 258 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHH-HHH
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHH-HHH
Confidence 467788888899999999999999999841 3445556777777 68 99999999997533 355
Q ss_pred ccCC
Q psy2951 840 DGKG 843 (1466)
Q Consensus 840 ~~~g 843 (1466)
..++
T Consensus 259 ~~~g 262 (448)
T 3axb_A 259 NPLG 262 (448)
T ss_dssp GGGT
T ss_pred HHcC
Confidence 4443
No 353
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.70 E-value=4.4e-05 Score=93.24 Aligned_cols=112 Identities=15% Similarity=0.191 Sum_probs=68.7
Q ss_pred CCCCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCC-------------CCCccchhc--------------c
Q psy2951 40 SGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY-------------DRVKLSKQL--------------D 92 (1466)
Q Consensus 40 ~~~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~-------------~~~~~~~~~--------------~ 92 (1466)
...++||+||||||+|+++|..|++.|.++.|+|......... ....+...+ .
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 88 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRP 88 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEE
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceeccee
Confidence 3456899999999999999999999999998887544321100 000000000 0
Q ss_pred cCc---------------ccccccChhhhhcCCeEEEeCceEEEec-cccccEEEecCCc---EEecCEEEEccCCCC
Q psy2951 93 IKA---------------DSILLRTEEFYKDNDIHVIKGKKIISDS-ELNEKKIKLQDGT---SIDFTKIYLATGSSP 151 (1466)
Q Consensus 93 ~~~---------------~~~~~~~~~~~~~~~v~~~~~~~v~~~~-~~~~~~v~~~~~~---~~~~d~lviAtG~~~ 151 (1466)
... ..+...+.+.+.+.+++++.++.+.... +.+..++++.++. ++++|+||.|.|.+.
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 89 VDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp EEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred cccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCccc
Confidence 000 0011112333445689999998876532 2334566666664 799999999999764
No 354
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.70 E-value=2.1e-05 Score=93.24 Aligned_cols=35 Identities=20% Similarity=0.257 Sum_probs=30.6
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCC
Q psy2951 593 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN 630 (1466)
Q Consensus 593 ~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~ 630 (1466)
+.+++|+|||||++|+++|+.|+ +|++ |+++|+.+
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~G~~--V~vlE~~~ 41 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-AHGR--VVVLEREA 41 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-TTSC--EEEECSSS
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-CCCC--EEEEECCC
Confidence 34689999999999999999999 5887 88888874
No 355
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.70 E-value=5.4e-05 Score=92.52 Aligned_cols=111 Identities=15% Similarity=0.187 Sum_probs=68.4
Q ss_pred CCCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCC-------------CCCccchhc--------------cc
Q psy2951 41 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY-------------DRVKLSKQL--------------DI 93 (1466)
Q Consensus 41 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~~~~~~~-------------~~~~~~~~~--------------~~ 93 (1466)
..++||+||||||+|+++|..|++.|.++.|+|......... ....+...+ ..
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 88 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPI 88 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceec
Confidence 446899999999999999999999999998887544321000 000000000 00
Q ss_pred Cc---------------ccccccChhhhhcCCeEEEeCceEEEec-cccccEEEecCCc---EEecCEEEEccCCCC
Q psy2951 94 KA---------------DSILLRTEEFYKDNDIHVIKGKKIISDS-ELNEKKIKLQDGT---SIDFTKIYLATGSSP 151 (1466)
Q Consensus 94 ~~---------------~~~~~~~~~~~~~~~v~~~~~~~v~~~~-~~~~~~v~~~~~~---~~~~d~lviAtG~~~ 151 (1466)
.. ..+...+.+.+++.+++++.++.+.... +.+..++++.++. ++++|+||.|.|.+.
T Consensus 89 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 89 DFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp EGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTC
T ss_pred ccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcch
Confidence 00 0011112333445689999998876532 2233456666654 799999999999764
No 356
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.70 E-value=6.1e-05 Score=85.12 Aligned_cols=38 Identities=13% Similarity=0.253 Sum_probs=32.4
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHc--CCCccEEEEcCCCCCC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQN--GFTGKLYFITDENFLP 633 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~--g~~~~v~~~~~~~~~~ 633 (1466)
..+||+|||||+||+++|+.|+++ |.+ |+++|+...+.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~--V~LiEk~~~~G 117 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLR--ITIVEAGVAPG 117 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSC--EEEEESSSSCC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCE--EEEEeCCCccC
Confidence 358999999999999999999998 877 88888875443
No 357
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.68 E-value=5.4e-05 Score=90.16 Aligned_cols=34 Identities=24% Similarity=0.488 Sum_probs=30.4
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN 630 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~ 630 (1466)
..||+|||||++|+++|+.|+++|.+ |+++|+..
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~--V~vlE~~~ 37 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHR--VLVLERHT 37 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC--EEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCe--EEEEeCCC
Confidence 47999999999999999999999988 77777764
No 358
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.67 E-value=5.1e-05 Score=89.55 Aligned_cols=34 Identities=21% Similarity=0.368 Sum_probs=30.7
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN 630 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~ 630 (1466)
.+||+|||||++|+++|+.|+++|.+ |+++|+..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~--V~vle~~~ 35 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLN--VLMTDAHM 35 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCC--EEEECSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCe--EEEEecCC
Confidence 47999999999999999999999987 88888764
No 359
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.65 E-value=9.3e-05 Score=92.05 Aligned_cols=38 Identities=16% Similarity=0.390 Sum_probs=32.8
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLP 633 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~ 633 (1466)
..++|+|||+|+|||++|+.|+++|++ |+++|+.+...
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~--v~~~e~~~~~~ 162 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAK--VILLEKEPIPG 162 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCC--EEEECSSSSSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCc--EEEEecCCCCC
Confidence 457999999999999999999999987 88888875443
No 360
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.63 E-value=0.00018 Score=86.39 Aligned_cols=100 Identities=21% Similarity=0.244 Sum_probs=78.5
Q ss_pred CeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCC--------cc----------------------------------
Q psy2951 1206 SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPF--------QE---------------------------------- 1243 (1466)
Q Consensus 1206 ~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~--------~~---------------------------------- 1243 (1466)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.+- +.
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEIA 85 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCeeE
Confidence 479999999999999999999999999999875220 00
Q ss_pred ----------------cc-cHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCC--eeecCEEEEeeccc
Q psy2951 1244 ----------------SL-GKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGT--TIPADLVIVGIGTV 1304 (1466)
Q Consensus 1244 ----------------~~-~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~--~i~~D~vv~a~G~~ 1304 (1466)
.+ ...+.+.|.+.+++.|++++.+++|++++..+++....+.+.+|+ ++.+|+||.|+|..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 86 DFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYG 165 (421)
T ss_dssp EEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGG
T ss_pred EEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCc
Confidence 00 034556777888888999999999999984334444567778887 79999999999976
Q ss_pred c
Q psy2951 1305 L 1305 (1466)
Q Consensus 1305 p 1305 (1466)
.
T Consensus 166 s 166 (421)
T 3nix_A 166 R 166 (421)
T ss_dssp C
T ss_pred h
Confidence 5
No 361
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.63 E-value=9.2e-05 Score=88.71 Aligned_cols=106 Identities=15% Similarity=0.171 Sum_probs=66.3
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCC----ccch-------hcc--------------------
Q psy2951 596 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRV----KLSK-------QLD-------------------- 644 (1466)
Q Consensus 596 ~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~----~~~~-------~~~-------------------- 644 (1466)
.+|+|||||||||++|..|+++|++ |+++|+.+.+..... .+.. .+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~--v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~ 79 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIK--VTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSR 79 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE--EEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC--EEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCccee
Confidence 6899999999999999999999988 777777643221100 0000 000
Q ss_pred --cCcccc---------------------c--ccCHhHh-hhCCcEEEEceEEEEecccc--ccEEEccCCCEEecCEEE
Q psy2951 645 --IKADSI---------------------L--LRTEEFY-KDNDIHVIKGKKIISDSELN--EKKIKLQDGTSIDFTKIY 696 (1466)
Q Consensus 645 --~~~~~~---------------------~--~~~~~~~-~~~gv~~~~~~~v~~i~~~~--~~~v~~~~~~~~~~d~lv 696 (1466)
.....+ + ..+.+.+ +..+.+++++++++.+...+ ..++++++|+++++|.||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvV 159 (412)
T 4hb9_A 80 FYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLV 159 (412)
T ss_dssp EECTTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEE
T ss_pred EecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEE
Confidence 000000 0 0011222 22355688888888873322 356888899999999999
Q ss_pred EcCCCCC
Q psy2951 697 LATGSSP 703 (1466)
Q Consensus 697 iAtG~~~ 703 (1466)
-|-|...
T Consensus 160 gADG~~S 166 (412)
T 4hb9_A 160 GADGSNS 166 (412)
T ss_dssp ECCCTTC
T ss_pred ECCCCCc
Confidence 9999643
No 362
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.63 E-value=0.00056 Score=84.37 Aligned_cols=59 Identities=19% Similarity=0.218 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHh-CCcEEEcCceEEEEEecCCCCeEEEEcCCCcEEeccEEEEeeccccC
Q psy2951 224 KEVGERITKLFES-KGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLN 283 (1466)
Q Consensus 224 ~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~ 283 (1466)
..+.+.+.+.+++ .|++++.+ +|++++.++++.+..+.+.+|.++.+|.||.|+|....
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 4566777888888 89999999 59999875445556677778778999999999998654
No 363
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.62 E-value=0.00021 Score=93.51 Aligned_cols=58 Identities=28% Similarity=0.346 Sum_probs=49.2
Q ss_pred cHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeecccc
Q psy2951 1246 GKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVL 1305 (1466)
Q Consensus 1246 ~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p 1305 (1466)
+..+...|.+.++++|++++.+++|+++. .+++.+..|.+.+| ++.||.||+|+|...
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~-~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIE-QSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEE-EETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEE-EeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 45778889999999999999999999998 44556667888887 799999999999764
No 364
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.60 E-value=8.8e-05 Score=92.40 Aligned_cols=101 Identities=19% Similarity=0.251 Sum_probs=78.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcc-----------------------------------------
Q psy2951 1205 ESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQE----------------------------------------- 1243 (1466)
Q Consensus 1205 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~----------------------------------------- 1243 (1466)
.-+|+|||+|..|+.+|..|++.|.+|+|+++.+.+-..
T Consensus 121 ~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~ 200 (566)
T 1qo8_A 121 TTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQND 200 (566)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 347999999999999999999999999999977532100
Q ss_pred ----------------------------------------------cccHHHHHHHHHHHHhCCcEEEcCceEEEEEecC
Q psy2951 1244 ----------------------------------------------SLGKEVGERITKLFESKGVKFVMKANVSSFEKNE 1277 (1466)
Q Consensus 1244 ----------------------------------------------~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~ 1277 (1466)
..+..+.+.|.+.+++.||+++++++|+++. .+
T Consensus 201 ~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~-~~ 279 (566)
T 1qo8_A 201 IKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLV-VN 279 (566)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEE-EC
T ss_pred HHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEE-EC
Confidence 0022345667777888999999999999998 44
Q ss_pred C-CcEEEEEcC--CCC--eeecCEEEEeeccccC
Q psy2951 1278 K-NDVTAANLD--NGT--TIPADLVIVGIGTVLN 1306 (1466)
Q Consensus 1278 ~-g~~~~v~l~--~g~--~i~~D~vv~a~G~~p~ 1306 (1466)
+ +++.+|.+. +|+ ++.+|.||+|+|....
T Consensus 280 ~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 280 DDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp TTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred CCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 5 777777665 675 6899999999997543
No 365
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.59 E-value=5.9e-05 Score=90.17 Aligned_cols=34 Identities=24% Similarity=0.403 Sum_probs=30.9
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCC-CcEEEEcC
Q psy2951 43 KDTFIVVGGGPSGATCVETLRQNGFT-GKLYFITD 76 (1466)
Q Consensus 43 ~~dVvIIGgG~AGl~aA~~l~~~g~~-v~i~~~~~ 76 (1466)
++||+||||||+|+++|..|++.|.+ +.|+|...
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 57999999999999999999999999 98887554
No 366
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.59 E-value=0.00011 Score=90.12 Aligned_cols=55 Identities=18% Similarity=0.246 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccc
Q psy2951 1248 EVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV 1304 (1466)
Q Consensus 1248 ~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~ 1304 (1466)
.+.+.|.+.+++.|++++++++|++|+. .++....|.+ ++.++.||.||++++..
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~-~~~~~~~v~~-~~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSL-QAEGRWKVSL-RDSSLEADHVISAIPAS 289 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEE-CGGGCEEEEC-SSCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEE-cCCceEEEEE-CCeEEEcCEEEECCCHH
Confidence 5777888889999999999999999983 3334345665 55689999999998753
No 367
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.59 E-value=7e-05 Score=89.51 Aligned_cols=35 Identities=23% Similarity=0.508 Sum_probs=28.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN 630 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~ 630 (1466)
.++|+||||||+|+++|..|++.|.+ +|+++|+.+
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~-~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIG-KVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCS-EEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCC-eEEEEECCC
Confidence 47999999999999999999999975 155555554
No 368
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.59 E-value=0.00025 Score=87.47 Aligned_cols=59 Identities=19% Similarity=0.279 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccC
Q psy2951 1247 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLN 1306 (1466)
Q Consensus 1247 ~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~ 1306 (1466)
..+.+.|.+.+++.|++++.+ +|++++..+++.+..|.+.+|+++.+|+||.|+|....
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 457778888888899999999 99999843456677899999989999999999998654
No 369
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.57 E-value=7.2e-05 Score=89.13 Aligned_cols=34 Identities=32% Similarity=0.560 Sum_probs=30.7
Q ss_pred CCeEEEEcCchHHHHHHHHHHHc--CCCccEEEEcCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQN--GFTGKLYFITDEN 630 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~--g~~~~v~~~~~~~ 630 (1466)
.+||+|||||++|+++|+.|+++ |.+ |+++|+..
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~--V~vlE~~~ 71 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRS--LLLVEEGG 71 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSC--EEEECSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCe--EEEEeCCC
Confidence 47999999999999999999999 987 88888764
No 370
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.57 E-value=0.00026 Score=88.35 Aligned_cols=101 Identities=21% Similarity=0.223 Sum_probs=78.3
Q ss_pred CCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcc-----------------------------------------
Q psy2951 1205 ESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQE----------------------------------------- 1243 (1466)
Q Consensus 1205 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~----------------------------------------- 1243 (1466)
..+|+|||+|..|+.+|..|++.|.+|+|+++.+.+...
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 458999999999999999999999999999976533100
Q ss_pred ----------------------------------------------cccHHHHHHHHHHHHhCCcEEEcCceEEEEEecC
Q psy2951 1244 ----------------------------------------------SLGKEVGERITKLFESKGVKFVMKANVSSFEKNE 1277 (1466)
Q Consensus 1244 ----------------------------------------------~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~ 1277 (1466)
..+..+.+.|.+.+++.||+++++++|+++...+
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~ 285 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDD 285 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECT
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcC
Confidence 0013445567777888999999999999998333
Q ss_pred CCcEEEEEcC--CCC--eeecCEEEEeecccc
Q psy2951 1278 KNDVTAANLD--NGT--TIPADLVIVGIGTVL 1305 (1466)
Q Consensus 1278 ~g~~~~v~l~--~g~--~i~~D~vv~a~G~~p 1305 (1466)
++++.+|.+. +|+ ++.+|.||+|+|...
T Consensus 286 ~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 286 KGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp TSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred CCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 3777777665 675 689999999999743
No 371
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.54 E-value=0.00077 Score=83.11 Aligned_cols=59 Identities=19% Similarity=0.218 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHh-cCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccC
Q psy2951 776 KEVGERITKLFES-KGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLN 835 (1466)
Q Consensus 776 ~~~~~~~~~~l~~-~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 835 (1466)
..+...+.+.+++ .|++++.+ ++++++..+++.+..+.+.+|.++.+|.||.|+|....
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 3466777788888 89999999 69999855455566778888778999999999998654
No 372
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.53 E-value=0.00031 Score=79.38 Aligned_cols=168 Identities=20% Similarity=0.204 Sum_probs=106.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHhcC--CCeEEEEcCCCcCCcc------------------------------------c-c
Q psy2951 1205 ESNVVVIGSSFIGMEAAAFCASK--VKSVTVVGRGAVPFQE------------------------------------S-L 1245 (1466)
Q Consensus 1205 ~~~vvVvG~g~~g~e~a~~l~~~--g~~v~vv~~~~~~~~~------------------------------------~-~ 1245 (1466)
..+|+|||+|..|+.+|..|+++ |.+|+++++.+.+-.. . .
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 35799999999999999999997 9999999987533100 0 0
Q ss_pred cHHHHHHHHHHHHh-CCcEEEcCceEEEEEecCC----------------C--cEEEEEcC--------------CCCee
Q psy2951 1246 GKEVGERITKLFES-KGVKFVMKANVSSFEKNEK----------------N--DVTAANLD--------------NGTTI 1292 (1466)
Q Consensus 1246 ~~~~~~~l~~~~~~-~gv~~~~~~~v~~i~~~~~----------------g--~~~~v~l~--------------~g~~i 1292 (1466)
..++.+.|.+.+++ .|++++.++.++++...++ + ++.+|... +..++
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i 238 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE
Confidence 13344566666777 5999999999998863221 2 56666542 23478
Q ss_pred ecCEEEEeeccccCcc-----ccccCCce--eeCCCeEEeC--CC---cccc--CCCEEEecccccCCCccCCCceeeee
Q psy2951 1293 PADLVIVGIGTVLNTN-----YLDGKGVE--LNGQKAVVVN--EY---LETN--VPGVYAGGDIAYAPLHSFYNKNASIG 1358 (1466)
Q Consensus 1293 ~~D~vv~a~G~~p~~~-----~~~~~gl~--~~~~G~i~vd--~~---~~t~--~~~v~a~GD~a~~p~~~~~~~~~~~~ 1358 (1466)
.++.||.|+|.....- .+...|+. +...+....+ +. -.|. +|++|++|=.+.-- .|.+.--.
T Consensus 239 ~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v~~gl~~~gm~~~~~----~g~~rmgp 314 (344)
T 3jsk_A 239 NAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREIVPGLIVGGMELSEI----DGANRMGP 314 (344)
T ss_dssp ECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEEETTEEECGGGHHHH----HTCEECCS
T ss_pred EcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceEcCCEEEechhhHhh----cCCCCCCc
Confidence 9999999999765521 23334443 1111112111 11 1122 79999999655421 12222223
Q ss_pred cHHHHHHHHHHHHHHhcC
Q psy2951 1359 HYQLAQYHGRIAALNMVE 1376 (1466)
Q Consensus 1359 ~~~~A~~qa~~aa~~i~g 1376 (1466)
.+..-...|+.||+-++.
T Consensus 315 ~fg~m~~sg~~~a~~~~~ 332 (344)
T 3jsk_A 315 TFGAMALSGVKAAHEAIR 332 (344)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred ccceeeecCHHHHHHHHH
Confidence 456677889999987764
No 373
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.53 E-value=0.00069 Score=80.47 Aligned_cols=56 Identities=18% Similarity=0.270 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeecccc
Q psy2951 1247 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVL 1305 (1466)
Q Consensus 1247 ~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p 1305 (1466)
..+...|.+.+++.|++++.+++|++++. +++.+ .|.+.+| ++.||.||+|+|...
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~-~~~~v-~v~t~~g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVP-DADGV-SVTTDRG-TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEE-ETTEE-EEEESSC-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEE-cCCeE-EEEECCC-EEEcCEEEEcCCcCh
Confidence 45677788888999999999999999983 33333 4666655 799999999999753
No 374
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.51 E-value=0.0002 Score=87.93 Aligned_cols=37 Identities=14% Similarity=0.189 Sum_probs=32.8
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFL 632 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~ 632 (1466)
...||||||||+|||+||+.|+++|.+ |+++|+.+..
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~--V~vlEk~~~~ 76 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGAD--VLVLERTSGW 76 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC--EEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCc--EEEEeCCCCC
Confidence 458999999999999999999999987 8888887543
No 375
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.50 E-value=0.00035 Score=82.97 Aligned_cols=101 Identities=15% Similarity=0.157 Sum_probs=76.8
Q ss_pred CeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcC------Ccc------------------------------------
Q psy2951 1206 SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVP------FQE------------------------------------ 1243 (1466)
Q Consensus 1206 ~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~------~~~------------------------------------ 1243 (1466)
.+|+|||+|..|+.+|..|++.|.+|+++++.+.+ -..
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 36999999999999999999999999999987631 000
Q ss_pred --c--------------cc-HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEc-CCCC--eeecCEEEEeecc
Q psy2951 1244 --S--------------LG-KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANL-DNGT--TIPADLVIVGIGT 1303 (1466)
Q Consensus 1244 --~--------------~~-~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l-~~g~--~i~~D~vv~a~G~ 1303 (1466)
. ++ ..+.+.|.+.+.+.|++++.+++|++++ .+++....|.+ .+|+ ++.+|+||.|.|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~-~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~ 161 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLH-DLQGERPYVTFERDGERLRLDCDYIAGCDGF 161 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEE-CTTSSSCEEEEEETTEEEEEECSEEEECCCT
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEE-EecCCceEEEEecCCcEEEEEeCEEEECCCC
Confidence 0 01 2345567777778899999999999998 33222234666 6887 7999999999998
Q ss_pred ccCc
Q psy2951 1304 VLNT 1307 (1466)
Q Consensus 1304 ~p~~ 1307 (1466)
....
T Consensus 162 ~S~v 165 (394)
T 1k0i_A 162 HGIS 165 (394)
T ss_dssp TCST
T ss_pred CcHH
Confidence 7664
No 376
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.50 E-value=0.00029 Score=83.30 Aligned_cols=61 Identities=16% Similarity=0.169 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCcccccc
Q psy2951 1248 EVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDG 1312 (1466)
Q Consensus 1248 ~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~~~~~~ 1312 (1466)
.+.+.|.+.+++.|++++.+++|+++. .+++.+ .|.+.+| ++.+|.||+|+|.... .++..
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~-~~~~~~-~v~~~~g-~~~a~~vV~A~G~~s~-~l~~~ 225 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVE-RDGEAL-FIKTPSG-DVWANHVVVASGVWSG-MFFKQ 225 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEE-CSSSSE-EEEETTE-EEEEEEEEECCGGGTH-HHHHH
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEE-EECCEE-EEEcCCc-eEEcCEEEECCChhHH-HHHHh
Confidence 455667788889999999999999998 444455 6777777 8999999999998643 34433
No 377
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.49 E-value=0.00055 Score=89.46 Aligned_cols=65 Identities=26% Similarity=0.294 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccCccccccCC
Q psy2951 776 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYLDGKG 843 (1466)
Q Consensus 776 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~g 843 (1466)
..+...+.+.+++.|++++.+++|++++.. ++.+..|.+.+| ++.+|.||+|+|.... .+.+..|
T Consensus 151 ~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~-~l~~~~g 215 (830)
T 1pj5_A 151 ARAVQLLIKRTESAGVTYRGSTTVTGIEQS-GGRVTGVQTADG-VIPADIVVSCAGFWGA-KIGAMIG 215 (830)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTE-EEECSEEEECCGGGHH-HHHHTTT
T ss_pred HHHHHHHHHHHHHcCCEEECCceEEEEEEe-CCEEEEEEECCc-EEECCEEEECCccchH-HHHHHhC
Confidence 467778888899999999999999999843 445556777777 7999999999998643 3444333
No 378
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.47 E-value=0.00035 Score=80.86 Aligned_cols=100 Identities=9% Similarity=0.117 Sum_probs=71.4
Q ss_pred CeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCccc-------------------ccHHHHHHHH------------
Q psy2951 1206 SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQES-------------------LGKEVGERIT------------ 1254 (1466)
Q Consensus 1206 ~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~-------------------~~~~~~~~l~------------ 1254 (1466)
.+|+|||+|.+|+.+|..|++.|.+|+|+++.+.+-.+. ..+.+.+.+.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 479999999999999999999999999999886431100 0122222222
Q ss_pred -------------------------------HHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeee-cCEEEEeec
Q psy2951 1255 -------------------------------KLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIP-ADLVIVGIG 1302 (1466)
Q Consensus 1255 -------------------------------~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~-~D~vv~a~G 1302 (1466)
+.+. .|++++++++|++++. +++. ..|.+.+|+.+. +|.||+|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~-~~~~-~~v~~~~g~~~~~a~~vV~a~g 159 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFR-GEEH-WNLLDAEGQNHGPFSHVIIATP 159 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEE-CSSC-EEEEETTSCEEEEESEEEECSC
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEE-eCCE-EEEEeCCCcCccccCEEEEcCC
Confidence 2222 3889999999999984 3333 457888998764 999999999
Q ss_pred cccCcc
Q psy2951 1303 TVLNTN 1308 (1466)
Q Consensus 1303 ~~p~~~ 1308 (1466)
......
T Consensus 160 ~~~~~~ 165 (336)
T 1yvv_A 160 APQAST 165 (336)
T ss_dssp HHHHGG
T ss_pred HHHHHH
Confidence 764433
No 379
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.47 E-value=0.00038 Score=84.26 Aligned_cols=101 Identities=21% Similarity=0.179 Sum_probs=79.0
Q ss_pred CeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCC------c------------------c------------------
Q psy2951 1206 SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPF------Q------------------E------------------ 1243 (1466)
Q Consensus 1206 ~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~------~------------------~------------------ 1243 (1466)
-+|+|||+|..|+.+|..|++.|.+|+++++.+.+. . .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 479999999999999999999999999999875320 0 0
Q ss_pred ---------ccc-HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcC---CCC--eeecCEEEEeeccccCc
Q psy2951 1244 ---------SLG-KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLD---NGT--TIPADLVIVGIGTVLNT 1307 (1466)
Q Consensus 1244 ---------~~~-~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~---~g~--~i~~D~vv~a~G~~p~~ 1307 (1466)
.+. ..+.+.|.+.+++.|++++.+++|+++. .+++.+..|.+. +|+ ++.||+||.|.|.....
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~-~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPI-FEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEE-EETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTT
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEE-EECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhh
Confidence 000 3466778888888999999999999998 445566556654 676 78999999999987653
No 380
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.46 E-value=0.00025 Score=84.28 Aligned_cols=100 Identities=18% Similarity=0.226 Sum_probs=73.5
Q ss_pred CCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcc-----cccHHHHH----------------------------
Q psy2951 1205 ESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQE-----SLGKEVGE---------------------------- 1251 (1466)
Q Consensus 1205 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~-----~~~~~~~~---------------------------- 1251 (1466)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+... .+.+...+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 468999999999999999999999999999987653111 11111111
Q ss_pred ---------------HHHHHHHh--CCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccC
Q psy2951 1252 ---------------RITKLFES--KGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLN 1306 (1466)
Q Consensus 1252 ---------------~l~~~~~~--~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~ 1306 (1466)
.+.+.+.+ .|++++.+++|++++. +++. ..|++.+|+++.+|+||.|.|....
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~-~~~~-v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQ-DSET-VQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEE-CSSC-EEEEETTSCEEEESEEEECCCTTCH
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEe-cCCE-EEEEECCCCEEECCEEEECCCcchh
Confidence 12222222 3889999999999983 3333 4588899999999999999998765
No 381
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.45 E-value=0.00053 Score=84.84 Aligned_cols=59 Identities=20% Similarity=0.189 Sum_probs=47.5
Q ss_pred cHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCC---C--CeeecCEEEEeecccc
Q psy2951 1246 GKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDN---G--TTIPADLVIVGIGTVL 1305 (1466)
Q Consensus 1246 ~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~---g--~~i~~D~vv~a~G~~p 1305 (1466)
+..+...+.+.++++|++++.+++|+++. .+++++..|.+.| | .++.||.||+|+|...
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~-~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFI-YDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEE-EETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEE-EcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 45677788888899999999999999998 4556677777654 4 4789999999999653
No 382
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.42 E-value=0.0002 Score=88.65 Aligned_cols=58 Identities=21% Similarity=0.185 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCC---C--cEEecCEEEEcccccc
Q psy2951 776 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDN---G--TTIPADLVIVGIGTVL 834 (1466)
Q Consensus 776 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~---g--~~i~~D~vi~a~G~~p 834 (1466)
..+...+.+.+.+.|++++.+++|+++... ++++..+.+.+ | .++.+|.||.|+|...
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 556677788888999999999999999853 45555565543 3 4789999999999753
No 383
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.41 E-value=0.00029 Score=86.36 Aligned_cols=34 Identities=24% Similarity=0.544 Sum_probs=30.9
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN 630 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~ 630 (1466)
.+||+|||||++|+++|+.|+++|.+ |+++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~--V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLS--VLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCC--EEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCC--EEEEECCC
Confidence 47999999999999999999999988 88888864
No 384
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.40 E-value=0.0013 Score=81.05 Aligned_cols=59 Identities=19% Similarity=0.279 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccC
Q psy2951 776 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLN 835 (1466)
Q Consensus 776 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 835 (1466)
..+...+.+.+++.|++++.+ ++++++..+++.+..+.+.+|+++.+|.||.|+|....
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 456677788888899999999 99999865556667788888889999999999998654
No 385
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.37 E-value=0.00017 Score=91.10 Aligned_cols=36 Identities=19% Similarity=0.358 Sum_probs=31.4
Q ss_pred CCCeEEEEcCchHHHHHHHHHHH-cCCCccEEEEcCCCC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQ-NGFTGKLYFITDENF 631 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~-~g~~~~v~~~~~~~~ 631 (1466)
...+|+||||||+||++|..|++ .|.+ |+++|+.+.
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~--V~viEr~~~ 67 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIR--TCIVEQKEG 67 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSC--EEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCC--EEEEeCCCC
Confidence 35799999999999999999999 9987 788887643
No 386
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.35 E-value=0.00083 Score=83.49 Aligned_cols=101 Identities=22% Similarity=0.308 Sum_probs=78.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcc-----------------------------------------
Q psy2951 1205 ESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQE----------------------------------------- 1243 (1466)
Q Consensus 1205 ~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~----------------------------------------- 1243 (1466)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+...
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 568999999999999999999999999999976532100
Q ss_pred --------------------------------------c--------ccHHHHHHHHHHHHhCCcEEEcCceEEEEEecC
Q psy2951 1244 --------------------------------------S--------LGKEVGERITKLFESKGVKFVMKANVSSFEKNE 1277 (1466)
Q Consensus 1244 --------------------------------------~--------~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~ 1277 (1466)
. .+..+...|.+.+++.||+++++++++++. .+
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~-~~ 284 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRIL-ED 284 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEE-EC
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEE-EC
Confidence 0 012445567777888999999999999997 34
Q ss_pred C-CcEEEEEcC--CCC--eeecCEEEEeeccccC
Q psy2951 1278 K-NDVTAANLD--NGT--TIPADLVIVGIGTVLN 1306 (1466)
Q Consensus 1278 ~-g~~~~v~l~--~g~--~i~~D~vv~a~G~~p~ 1306 (1466)
+ +++.+|.+. +|+ ++.+|.||+|+|..++
T Consensus 285 ~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 285 ASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp --CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred CCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 5 787777765 664 6899999999996553
No 387
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.33 E-value=0.00015 Score=82.05 Aligned_cols=38 Identities=13% Similarity=0.218 Sum_probs=33.3
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY 634 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~ 634 (1466)
..||+|||||||||+||+.|+++|++ |+++|+.+.+++
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~--V~v~Ek~~~~GG 39 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQ--VHLFDKSRGSGG 39 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCC--EEEECSSSSSCG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC--EEEEECCCCCCC
Confidence 36899999999999999999999998 888888766543
No 388
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.31 E-value=9e-05 Score=87.54 Aligned_cols=35 Identities=20% Similarity=0.436 Sum_probs=30.5
Q ss_pred CeEEEEcCchHHHHHHHHHHHc--CCCccEEEEcCCCCC
Q psy2951 596 DTFIVVGGGPSGATCVETLRQN--GFTGKLYFITDENFL 632 (1466)
Q Consensus 596 ~~vvVIGgG~AGl~aA~~l~~~--g~~~~v~~~~~~~~~ 632 (1466)
++|+||||||||+++|..|+++ |.+ |+++|+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~--V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWA--IDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSE--EEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCC--EEEEECCCCC
Confidence 4899999999999999999999 876 8888886543
No 389
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.30 E-value=0.00039 Score=86.15 Aligned_cols=35 Identities=17% Similarity=0.378 Sum_probs=31.0
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENF 631 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~ 631 (1466)
.++|+||||||+|+++|..|+++|.+ |+++|+.+.
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~--V~vlEr~~~ 60 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVG--HLVVEQTDG 60 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC--EEEECSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC--EEEEeCCCC
Confidence 47999999999999999999999987 788887643
No 390
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.29 E-value=0.0012 Score=82.26 Aligned_cols=101 Identities=18% Similarity=0.171 Sum_probs=79.6
Q ss_pred CeEEEEcCCHHHHHHHHHHhcC------CCeEEEEcCCCcCCcc------------------------------------
Q psy2951 1206 SNVVVIGSSFIGMEAAAFCASK------VKSVTVVGRGAVPFQE------------------------------------ 1243 (1466)
Q Consensus 1206 ~~vvVvG~g~~g~e~a~~l~~~------g~~v~vv~~~~~~~~~------------------------------------ 1243 (1466)
-+|+|||+|..|+.+|..|++. |.+|+|+++.+.+-..
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 4799999999999999999998 9999999976432100
Q ss_pred --------cc---c--------------HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcC------CC---
Q psy2951 1244 --------SL---G--------------KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLD------NG--- 1289 (1466)
Q Consensus 1244 --------~~---~--------------~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~------~g--- 1289 (1466)
.+ + ..+.++|.+.+++.||+++.+++++++...+++.+..|.+. +|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~ 195 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPK 195 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcc
Confidence 00 0 14566788888899999999999999984445677778776 34
Q ss_pred ------CeeecCEEEEeeccccC
Q psy2951 1290 ------TTIPADLVIVGIGTVLN 1306 (1466)
Q Consensus 1290 ------~~i~~D~vv~a~G~~p~ 1306 (1466)
.++.+|+||.|.|....
T Consensus 196 ~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 196 TTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp EEEECCCEEECSEEEECCCTTCH
T ss_pred cccCCceEEECCEEEEeeCCCch
Confidence 68999999999998765
No 391
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.24 E-value=0.00038 Score=85.25 Aligned_cols=34 Identities=24% Similarity=0.530 Sum_probs=31.6
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN 1101 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~ 1101 (1466)
+.+|+|||||++|+++|..|+++|. +|+|||+++
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~--~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGL--SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC--CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCC--CEEEEECCC
Confidence 4689999999999999999999998 999999974
No 392
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.23 E-value=0.00022 Score=80.68 Aligned_cols=36 Identities=14% Similarity=0.279 Sum_probs=33.3
Q ss_pred CcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy2951 1067 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLP 1104 (1466)
Q Consensus 1067 ~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~ 1104 (1466)
.+|+|||||||||+||..|+++|+ +|+|||+++.++
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~--~V~v~Ek~~~~G 38 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGH--QVHLFDKSRGSG 38 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC--CEEEECSSSSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC--CEEEEECCCCCC
Confidence 579999999999999999999999 999999987654
No 393
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.23 E-value=0.00025 Score=87.85 Aligned_cols=36 Identities=22% Similarity=0.324 Sum_probs=31.1
Q ss_pred CCCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcC
Q psy2951 41 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITD 76 (1466)
Q Consensus 41 ~~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~ 76 (1466)
+.++||+||||||+|+++|..|++.|.++.|+|...
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~ 59 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTD 59 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 345799999999999999999999999988876543
No 394
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.18 E-value=0.00048 Score=87.80 Aligned_cols=39 Identities=18% Similarity=0.457 Sum_probs=34.1
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY 634 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~ 634 (1466)
..++|+|||||++|++||+.|++.|++ |+++|+....++
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~--v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIK--VTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCE--EEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCc--EEEEecccceec
Confidence 468999999999999999999999987 888888765554
No 395
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.17 E-value=0.002 Score=79.64 Aligned_cols=56 Identities=21% Similarity=0.232 Sum_probs=45.2
Q ss_pred HHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCc
Q psy2951 1251 ERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNT 1307 (1466)
Q Consensus 1251 ~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~ 1307 (1466)
+.|.+.+++.|++++.+ +|+++...+++.+..|.+.+|+++.+|+||.|+|.....
T Consensus 169 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhh
Confidence 45666677789999999 899998444556677889999889999999999987653
No 396
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.16 E-value=0.00034 Score=88.29 Aligned_cols=35 Identities=20% Similarity=0.319 Sum_probs=30.5
Q ss_pred CCCcEEEECCchHHHHHHHHHHh-cCCCCcEEEEcC
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQ-NGFTGKLYFITD 76 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~-~g~~v~i~~~~~ 76 (1466)
.++||+||||||+|+++|..|++ .|.++.|+|...
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~ 66 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKE 66 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 35799999999999999999999 999888876443
No 397
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.15 E-value=0.0018 Score=80.36 Aligned_cols=60 Identities=10% Similarity=0.089 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEEC---CCCc--EEecCEEEEccccccC
Q psy2951 776 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANL---DNGT--TIPADLVIVGIGTVLN 835 (1466)
Q Consensus 776 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~---~~g~--~i~~D~vi~a~G~~p~ 835 (1466)
..+...+.+.+++.||+++.++.++++..++++++..+.. .+|+ .+.++.||+|+|-...
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCcc
Confidence 5666778888888999999999999998543556655553 5565 6899999999997543
No 398
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.12 E-value=0.0016 Score=77.80 Aligned_cols=100 Identities=13% Similarity=0.109 Sum_probs=71.7
Q ss_pred CeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcc------cccHHHH-----------------------------
Q psy2951 1206 SNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQE------SLGKEVG----------------------------- 1250 (1466)
Q Consensus 1206 ~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~------~~~~~~~----------------------------- 1250 (1466)
-+|+|||+|+.|+-+|..|+++|.+|+|+++.+.+-.+ .+.+...
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 37999999999999999999999999999987644211 0000000
Q ss_pred ------------------------------HHHHHHHH-hCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEE
Q psy2951 1251 ------------------------------ERITKLFE-SKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIV 1299 (1466)
Q Consensus 1251 ------------------------------~~l~~~~~-~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~ 1299 (1466)
..|.+.|. ..+..++.++++++++..+++ ...|.++||+++.+|+||-
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~-~v~v~~~dG~~~~adlvVg 160 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENG-GIKIFFADGSHENVDVLVG 160 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTS-CEEEEETTSCEEEESEEEE
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCC-eEEEEECCCCEEEeeEEEE
Confidence 12333332 234567889999999743444 3568999999999999999
Q ss_pred eeccccC
Q psy2951 1300 GIGTVLN 1306 (1466)
Q Consensus 1300 a~G~~p~ 1306 (1466)
|-|....
T Consensus 161 ADG~~S~ 167 (412)
T 4hb9_A 161 ADGSNSK 167 (412)
T ss_dssp CCCTTCH
T ss_pred CCCCCcc
Confidence 9997654
No 399
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.11 E-value=0.0022 Score=72.02 Aligned_cols=166 Identities=16% Similarity=0.154 Sum_probs=102.8
Q ss_pred CeEEEEcCCHHHHHHHHHHhcC--CCeEEEEcCCCcCCccc-------------------------------------cc
Q psy2951 1206 SNVVVIGSSFIGMEAAAFCASK--VKSVTVVGRGAVPFQES-------------------------------------LG 1246 (1466)
Q Consensus 1206 ~~vvVvG~g~~g~e~a~~l~~~--g~~v~vv~~~~~~~~~~-------------------------------------~~ 1246 (1466)
-+|+|||+|..|+.+|..|++. |.+|+++++.+.+-... ..
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~ 145 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHA 145 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcch
Confidence 4799999999999999999998 99999999865431000 01
Q ss_pred HHHHHHHHHHHHhC-CcEEEcCceEEEEEecC--C-C--cEEEEEcC--------------CCCeeec------------
Q psy2951 1247 KEVGERITKLFESK-GVKFVMKANVSSFEKNE--K-N--DVTAANLD--------------NGTTIPA------------ 1294 (1466)
Q Consensus 1247 ~~~~~~l~~~~~~~-gv~~~~~~~v~~i~~~~--~-g--~~~~v~l~--------------~g~~i~~------------ 1294 (1466)
..+...|.+.+++. ||+++.+++++++...+ + + ++.+|.+. ++.++.|
T Consensus 146 ~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~ 225 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLS 225 (326)
T ss_dssp HHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSS
T ss_pred HHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccccccc
Confidence 33445566666664 99999999999997332 3 4 77777652 3457899
Q ss_pred ---CEEEEeeccccCcc-ccccCCceeeCC----C--e--------EEeCCCccc-cCCCEEEecccccCCCccCCCcee
Q psy2951 1295 ---DLVIVGIGTVLNTN-YLDGKGVELNGQ----K--A--------VVVNEYLET-NVPGVYAGGDIAYAPLHSFYNKNA 1355 (1466)
Q Consensus 1295 ---D~vv~a~G~~p~~~-~~~~~gl~~~~~----G--~--------i~vd~~~~t-~~~~v~a~GD~a~~p~~~~~~~~~ 1355 (1466)
|+||.|+|...... ++...-..++.. | . .+|+.+-.. -+|++|++|-.+..-.. .+
T Consensus 226 ~~~~~VV~ATG~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~- 300 (326)
T 2gjc_A 226 QKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDG----LN- 300 (326)
T ss_dssp TTCCEEEECCCCC--CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTHHHHHHHT----CC-
T ss_pred ccCCEEEECcCCCchHHHHHHhhccccccccccCceeccccccchhheeecCCCccccCCEEECChHHHHhcC----CC-
Confidence 99999999765433 332210000100 1 0 111111221 47999999976532110 00
Q ss_pred eee-cHHHHHHHHHHHHHHhcC
Q psy2951 1356 SIG-HYQLAQYHGRIAALNMVE 1376 (1466)
Q Consensus 1356 ~~~-~~~~A~~qa~~aa~~i~g 1376 (1466)
|.+ .+..-...|+.||..|+.
T Consensus 301 r~g~~fg~m~~sg~~~a~~~~~ 322 (326)
T 2gjc_A 301 RMGPTFGAMALSGVHAAEQILK 322 (326)
T ss_dssp BCCSCCHHHHHHHHHHHHHHHH
T ss_pred CCChhhhhhhhhhHHHHHHHHH
Confidence 111 235667788899887763
No 400
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.09 E-value=0.0012 Score=77.47 Aligned_cols=55 Identities=16% Similarity=0.227 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeecccc
Q psy2951 1248 EVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVL 1305 (1466)
Q Consensus 1248 ~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p 1305 (1466)
.+.+.|.+.+++.|++++.+++|++++. +++. ..|.+.+| ++.+|.||+|+|...
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~-~~~~-~~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRH-DDDG-VTIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEE-CSSS-EEEEESSC-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEE-cCCE-EEEEECCC-eEEcCEEEEcCCccH
Confidence 3455667777889999999999999983 3333 45777777 599999999999754
No 401
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.06 E-value=0.00016 Score=85.29 Aligned_cols=34 Identities=21% Similarity=0.469 Sum_probs=31.4
Q ss_pred cEEEECCchHHHHHHHHHHhc--CCCCcEEEEcCCCCC
Q psy2951 1068 TFIVVGGGPSGATCVETLRQN--GFTGKLYFITDENFL 1103 (1466)
Q Consensus 1068 ~vvIVG~G~aGl~aA~~L~~~--g~~~~i~li~~~~~~ 1103 (1466)
+|+|||||++|+++|..|++. |. +|+|||+.+..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~--~V~v~E~~~~~ 37 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLW--AIDIVEKNDEQ 37 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTS--EEEEECSSCTT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCC--CEEEEECCCCC
Confidence 799999999999999999999 88 99999998654
No 402
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.06 E-value=0.0011 Score=82.51 Aligned_cols=34 Identities=26% Similarity=0.330 Sum_probs=30.3
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN 630 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~ 630 (1466)
..||||||||+|||+||+.|++.|.+ |+++|+..
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~--V~vlEK~~ 51 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFN--TACVTKLF 51 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC--EEEEESSC
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCc--EEEEeccC
Confidence 47999999999999999999999988 77777753
No 403
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.01 E-value=0.003 Score=70.92 Aligned_cols=101 Identities=15% Similarity=0.156 Sum_probs=73.2
Q ss_pred CcEEEECCCHhHHHHHHHHhhC--CCEEEEEeecCccccc-------------------------------------ccC
Q psy2951 183 SNVVVIGSSFIGMEAAAFCASK--VKSVTVVGRGAVPFQE-------------------------------------SLG 223 (1466)
Q Consensus 183 ~~vvVvGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~~~~-------------------------------------~~~ 223 (1466)
.+|+|||+|+.|+.+|..|++. |.+|+++++.+.+-.. ...
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~ 145 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHA 145 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcch
Confidence 3799999999999999999998 9999999985433100 012
Q ss_pred HHHHHHHHHHHHhC-CcEEEcCceEEEEEecC--C-C--CeEEEEcC--------------CCcEEec------------
Q psy2951 224 KEVGERITKLFESK-GVKFVMKANVSSFEKNE--K-N--DVTAANLD--------------NGTTIPA------------ 271 (1466)
Q Consensus 224 ~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~--~-~--~~~~v~~~--------------~g~~i~~------------ 271 (1466)
.++...+.+.+.+. |++++.++.+.++..++ + + ++..+.+. +..++.+
T Consensus 146 ~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~ 225 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLS 225 (326)
T ss_dssp HHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSS
T ss_pred HHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccccccc
Confidence 34455666666664 99999999999987653 2 3 66665431 3457999
Q ss_pred ---cEEEEeeccccC
Q psy2951 272 ---DLVIVGIGTVLN 283 (1466)
Q Consensus 272 ---D~Vi~a~G~~p~ 283 (1466)
+.||.|||....
T Consensus 226 ~~~~~VV~ATG~~~~ 240 (326)
T 2gjc_A 226 QKHGVILSTTGHDGP 240 (326)
T ss_dssp TTCCEEEECCCCC--
T ss_pred ccCCEEEECcCCCch
Confidence 999999997653
No 404
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.99 E-value=0.0026 Score=77.96 Aligned_cols=58 Identities=14% Similarity=0.168 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCC---eeecC-EEEEeecccc
Q psy2951 1248 EVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGT---TIPAD-LVIVGIGTVL 1305 (1466)
Q Consensus 1248 ~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~---~i~~D-~vv~a~G~~p 1305 (1466)
.+.+.|.+.+++.||+++++++++++...+++++.+|.+.++. ++.|| .||+|+|-..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 4556677778889999999999999984336788888775432 58997 9999999654
No 405
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.98 E-value=0.0037 Score=77.32 Aligned_cols=56 Identities=21% Similarity=0.232 Sum_probs=44.1
Q ss_pred HHHHHHHHhCCcEEEcCceEEEEEecCCCCeEEEEcCCCcEEeccEEEEeeccccCc
Q psy2951 228 ERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNT 284 (1466)
Q Consensus 228 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~~ 284 (1466)
+.+.+.+++.|++++.+ +|++++.++++.+..+.+.+|+++.+|.||.|+|.....
T Consensus 169 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhh
Confidence 44556666789999999 899998755455666788888889999999999986543
No 406
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=96.96 E-value=0.0021 Score=77.00 Aligned_cols=56 Identities=21% Similarity=0.236 Sum_probs=43.5
Q ss_pred HHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccCcccc
Q psy2951 1253 ITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYL 1310 (1466)
Q Consensus 1253 l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~~~~~ 1310 (1466)
|.+.++++|++++++++|++|. .+++++..|.++ |+++.||.||+++|......++
T Consensus 202 l~~~~~~~G~~i~~~~~V~~i~-~~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll 257 (425)
T 3ka7_A 202 LETVISANGGKIHTGQEVSKIL-IENGKAAGIIAD-DRIHDADLVISNLGHAATAVLC 257 (425)
T ss_dssp HHHHHHHTTCEEECSCCEEEEE-EETTEEEEEEET-TEEEECSEEEECSCHHHHHHHT
T ss_pred HHHHHHHcCCEEEECCceeEEE-EECCEEEEEEEC-CEEEECCEEEECCCHHHHHHhc
Confidence 4556678899999999999998 455677667775 7789999999999865443333
No 407
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=96.96 E-value=0.0012 Score=78.57 Aligned_cols=97 Identities=16% Similarity=0.275 Sum_probs=70.6
Q ss_pred CeEEEEcCCHHHHHHHHHHhcC--CCeEEEEcCCCcC-----------C--cccc-------------------------
Q psy2951 1206 SNVVVIGSSFIGMEAAAFCASK--VKSVTVVGRGAVP-----------F--QESL------------------------- 1245 (1466)
Q Consensus 1206 ~~vvVvG~g~~g~e~a~~l~~~--g~~v~vv~~~~~~-----------~--~~~~------------------------- 1245 (1466)
.+|+|||+|.+|+-+|..|+++ |.+|+|+++.... + ...+
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 116 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGKTL 116 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSCCC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCCCC
Confidence 4799999999999999999999 9999999975311 1 0000
Q ss_pred ------------------------------------------------------cHHHHHHHHHHHHhCCcEEEcCceEE
Q psy2951 1246 ------------------------------------------------------GKEVGERITKLFESKGVKFVMKANVS 1271 (1466)
Q Consensus 1246 ------------------------------------------------------~~~~~~~l~~~~~~~gv~~~~~~~v~ 1271 (1466)
+..+...|.+.+++.|++++.+++|+
T Consensus 117 ~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~ 196 (405)
T 3c4n_A 117 EVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTRAE 196 (405)
T ss_dssp CEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEECSCEEE
T ss_pred cEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCEEE
Confidence 01255567777888999999999999
Q ss_pred ---------EEEecCCCcEEEEEcCCCCeeecCEEEEeecccc
Q psy2951 1272 ---------SFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVL 1305 (1466)
Q Consensus 1272 ---------~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p 1305 (1466)
++. .+++.+ .|.+.+| ++.||.||+|+|...
T Consensus 197 ~~~g~~~~~~i~-~~~~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 197 LVPGGVRLHRLT-VTNTHQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp EETTEEEEECBC-C--------CBCCE-EEEEEEEEECCGGGH
T ss_pred eccccccccceE-eeCCeE-EEEECCc-EEECCEEEECCCccH
Confidence 886 334444 5767666 899999999999754
No 408
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.89 E-value=0.0015 Score=80.95 Aligned_cols=35 Identities=20% Similarity=0.401 Sum_probs=31.4
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN 630 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~ 630 (1466)
..+||+|||||++|+++|+.|+++|++ |+++|+..
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~--V~LlE~~~ 65 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIK--TGLIEMQD 65 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCC--EEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCc--EEEEeCCC
Confidence 358999999999999999999999988 88888764
No 409
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.75 E-value=0.0021 Score=80.39 Aligned_cols=34 Identities=12% Similarity=0.219 Sum_probs=30.3
Q ss_pred CCeEEEEcCchHHHHHHHHHHHc------CCCccEEEEcCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQN------GFTGKLYFITDEN 630 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~------g~~~~v~~~~~~~ 630 (1466)
..||||||||+|||+||+.|+++ |.+ |+++++..
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~--V~vleK~~ 61 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAK--ILLVDKAS 61 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCC--EEEECSSC
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCc--EEEEEecC
Confidence 57999999999999999999998 877 88888753
No 410
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.70 E-value=0.0021 Score=81.21 Aligned_cols=34 Identities=21% Similarity=0.451 Sum_probs=30.3
Q ss_pred CCeEEEEcCchHHHHHHHHHHH-----cCCCccEEEEcCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQ-----NGFTGKLYFITDEN 630 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~-----~g~~~~v~~~~~~~ 630 (1466)
..+|+||||||+||++|..|++ .|.+ |+++|+.+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~--v~viE~~~ 46 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLK--VRIIDKRS 46 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCC--EEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCC--EEEEeCCC
Confidence 4799999999999999999999 9987 77888754
No 411
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=96.60 E-value=0.0011 Score=81.93 Aligned_cols=53 Identities=17% Similarity=0.272 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEcccc
Q psy2951 776 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGT 832 (1466)
Q Consensus 776 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 832 (1466)
..+.+.+.+.+.+.|+++++++.|++|... ++ .+.+.+|+++.+|.||.++..
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~-~~---~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNAN-NK---TVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETT-TT---EEEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEcc-CC---EEEEcCCCEEECCEEEECCCH
Confidence 345566777778889999999999999833 32 356788889999999987653
No 412
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.49 E-value=0.0055 Score=77.04 Aligned_cols=35 Identities=17% Similarity=0.429 Sum_probs=30.6
Q ss_pred CCCeEEEEcCchHHHHHHHHHH---H-cCCCccEEEEcCCC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLR---Q-NGFTGKLYFITDEN 630 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~---~-~g~~~~v~~~~~~~ 630 (1466)
...||||||||+|||+||+.|+ + .|.+ |+++|+..
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~--V~vlEK~~ 59 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLK--VTLVEKAA 59 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCC--EEEECSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCe--EEEEeCcC
Confidence 3579999999999999999999 6 7987 88888865
No 413
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.43 E-value=0.0027 Score=73.29 Aligned_cols=40 Identities=20% Similarity=0.371 Sum_probs=34.5
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCC-CCCCC
Q psy2951 593 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDE-NFLPY 634 (1466)
Q Consensus 593 ~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~-~~~~~ 634 (1466)
...++|+|||||++||+||+.|+++|++ |+++|++ ..+++
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~--V~VlE~~~~~vGG 82 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHD--VTILEANANRVGG 82 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCE--EEEECSCSSCCBT
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCc--EEEEeccccccCC
Confidence 4568999999999999999999999986 8888887 65544
No 414
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=96.35 E-value=0.0017 Score=80.14 Aligned_cols=52 Identities=15% Similarity=0.259 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeec
Q psy2951 1247 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIG 1302 (1466)
Q Consensus 1247 ~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G 1302 (1466)
..+.+.+.+.+++.|++++++++|++|. .+++ .+++.||+++.||.||+++.
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~-~~~~---~v~~~~G~~~~ad~vI~t~P 273 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVN-ANNK---TVTLQDGTTIGYKKLVSTMA 273 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEE-TTTT---EEEETTSCEEEEEEEEECSC
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEE-ccCC---EEEEcCCCEEECCEEEECCC
Confidence 4466777777888999999999999998 4443 36789999999999999755
No 415
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=96.34 E-value=0.0029 Score=76.26 Aligned_cols=59 Identities=14% Similarity=0.142 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEEecC-CCcEEEEEcCCCCeeecCEEEEeeccccC
Q psy2951 1247 KEVGERITKLFESKGVKFVMKANVSSFEKNE-KNDVTAANLDNGTTIPADLVIVGIGTVLN 1306 (1466)
Q Consensus 1247 ~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~-~g~~~~v~l~~g~~i~~D~vv~a~G~~p~ 1306 (1466)
..+.+.|.+.+++.|++++++++|++|.... ++++..|.+ +|+++.||.||+++|..|.
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 4678888899999999999999999998321 567767776 5888999999999998754
No 416
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.31 E-value=0.0035 Score=72.38 Aligned_cols=38 Identities=18% Similarity=0.372 Sum_probs=34.2
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCC-CCCC
Q psy2951 1065 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDE-NFLP 1104 (1466)
Q Consensus 1065 ~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~-~~~~ 1104 (1466)
...+|+|||||++||+||..|++.|+ +|+|+|++ +..+
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~--~V~VlE~~~~~vG 81 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGH--DVTILEANANRVG 81 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSC--EEEEECSCSSCCB
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCC--cEEEEeccccccC
Confidence 45789999999999999999999998 99999998 6544
No 417
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=96.30 E-value=0.0017 Score=77.75 Aligned_cols=34 Identities=26% Similarity=0.298 Sum_probs=30.0
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcC
Q psy2951 43 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITD 76 (1466)
Q Consensus 43 ~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~ 76 (1466)
++||+||||||+|+++|..|++.|.+|.|++...
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4799999999999999999999999988877543
No 418
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=96.30 E-value=0.0036 Score=74.94 Aligned_cols=40 Identities=18% Similarity=0.361 Sum_probs=34.9
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcC-CCccEEEEcCCCCCCCC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNG-FTGKLYFITDENFLPYD 635 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g-~~~~v~~~~~~~~~~~~ 635 (1466)
..+||+|||||++||+||+.|++.| ++ |+++|+++.+++.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~--v~v~E~~~~~GG~ 45 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHD--YTILERTDHVGGK 45 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCC--EEEECSSSCSSTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCc--EEEEECCCCCCCc
Confidence 4689999999999999999999999 77 8899988776543
No 419
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=96.25 E-value=0.0035 Score=75.55 Aligned_cols=59 Identities=14% Similarity=0.142 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHhcCcEEEccceEEEEEecC-CCceEEEECCCCcEEecCEEEEccccccC
Q psy2951 776 KEVGERITKLFESKGVKFVMKANVSSFEKNE-KNDVTAANLDNGTTIPADLVIVGIGTVLN 835 (1466)
Q Consensus 776 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~-~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 835 (1466)
..+.+.+.+.+++.|+++++++.|++|.... ++++..|.+ +|+++.+|.||+++|..+.
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 4577778888888999999999999997432 455556665 4778999999999987654
No 420
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=96.23 E-value=0.0032 Score=76.79 Aligned_cols=54 Identities=19% Similarity=0.255 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEcccc
Q psy2951 777 EVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGT 832 (1466)
Q Consensus 777 ~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 832 (1466)
.+.+.+.+.+++.|+++++++.|++|+..++ ....|.+ ++.++.+|.||+|++.
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~-~~~~v~~-~~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAE-GRWKVSL-RDSSLEADHVISAIPA 288 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGG-GCEEEEC-SSCEEEESEEEECSCH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCC-ceEEEEE-CCeEEEcCEEEECCCH
Confidence 4677788888999999999999999985433 3345666 4557999999999865
No 421
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=96.19 E-value=0.0028 Score=74.10 Aligned_cols=33 Identities=18% Similarity=0.396 Sum_probs=29.6
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEE
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFI 74 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~ 74 (1466)
.++||+|||||++|+++|+.|+++|.+|.|++.
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~ 37 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILAR 37 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEec
Confidence 468999999999999999999999998877654
No 422
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=96.18 E-value=0.0032 Score=75.48 Aligned_cols=62 Identities=19% Similarity=0.220 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccCcccc
Q psy2951 776 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLNTNYL 839 (1466)
Q Consensus 776 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~~ 839 (1466)
..+.+.+.+.++++|+++++++.|++|... ++++..|.++ |+++.+|.||+|+|......++
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll 257 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIE-NGKAAGIIAD-DRIHDADLVISNLGHAATAVLC 257 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEET-TEEEECSEEEECSCHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEE-CCEEEEEEEC-CEEEECCEEEECCCHHHHHHhc
Confidence 557788889999999999999999999853 4556556664 7789999999999876544444
No 423
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.13 E-value=0.0053 Score=77.48 Aligned_cols=35 Identities=23% Similarity=0.447 Sum_probs=31.9
Q ss_pred CCcEEEECCchHHHHHHHHHHh-----cCCCCcEEEEcCCCC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQ-----NGFTGKLYFITDENF 1102 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~-----~g~~~~i~li~~~~~ 1102 (1466)
..+|+|||||++|+++|..|++ .|. +|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi--~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDL--KVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTC--CEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCC--CEEEEeCCCC
Confidence 3589999999999999999999 998 9999998754
No 424
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=96.10 E-value=0.005 Score=71.75 Aligned_cols=41 Identities=17% Similarity=0.354 Sum_probs=35.5
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCC
Q psy2951 593 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD 635 (1466)
Q Consensus 593 ~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~ 635 (1466)
...+||+|||||++|+++|+.|++.|.+ |+++|+.+.+++.
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~--v~v~E~~~~~GG~ 67 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQR--VLIVDRRPHIGGN 67 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCC--EEEECSSSSSSGG
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCc--eEEEeccCCCCCc
Confidence 4568999999999999999999999987 8899988766543
No 425
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=96.08 E-value=0.0051 Score=73.61 Aligned_cols=38 Identities=18% Similarity=0.373 Sum_probs=34.4
Q ss_pred CCcEEEECCchHHHHHHHHHHhcC-CCCcEEEEcCCCCCCC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNG-FTGKLYFITDENFLPY 1105 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g-~~~~i~li~~~~~~~~ 1105 (1466)
..+|+|||||++||+||..|++.| . +|+|+|+++.++.
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~--~v~v~E~~~~~GG 44 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFH--DYTILERTDHVGG 44 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCC--CEEEECSSSCSST
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCC--cEEEEECCCCCCC
Confidence 468999999999999999999999 7 9999999887654
No 426
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=96.07 E-value=0.0035 Score=77.15 Aligned_cols=40 Identities=25% Similarity=0.370 Sum_probs=35.1
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcC-CCccEEEEcCCCCCCCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNG-FTGKLYFITDENFLPYDR 636 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g-~~~~v~~~~~~~~~~~~~ 636 (1466)
.++|+|||||+|||+||+.|++.| ++ |+++|+.+.+++..
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~--V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQD--CLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCS--EEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCC--EEEEeCCCCCCCce
Confidence 479999999999999999999999 77 88999987766543
No 427
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=96.07 E-value=0.0035 Score=74.97 Aligned_cols=34 Identities=29% Similarity=0.371 Sum_probs=31.6
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN 1101 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~ 1101 (1466)
+++|+|||||++|+++|..|++.|+ +|+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~--~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDV--DVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTC--EEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCC--eEEEEcCCC
Confidence 3689999999999999999999999 999999986
No 428
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=96.04 E-value=0.0051 Score=75.20 Aligned_cols=40 Identities=20% Similarity=0.424 Sum_probs=35.0
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD 635 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~ 635 (1466)
..++|+|||||+|||+||+.|++.|++ |+++|+.+.+++.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~--v~v~E~~~~~GG~ 49 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYK--VTVLEARTRPGGR 49 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCE--EEEECSSSSSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCC--EEEEeccCCCCCc
Confidence 468999999999999999999999986 8899998766543
No 429
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.03 E-value=0.022 Score=70.46 Aligned_cols=52 Identities=23% Similarity=0.244 Sum_probs=39.5
Q ss_pred HHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcC---CCC--eeecCEEEEeecccc
Q psy2951 1253 ITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLD---NGT--TIPADLVIVGIGTVL 1305 (1466)
Q Consensus 1253 l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~---~g~--~i~~D~vv~a~G~~p 1305 (1466)
+.+.++++|++++.+++|+++. .+++++..|.+. +|+ ++.||.||+|+|.-.
T Consensus 194 l~~~a~~~Ga~i~~~t~V~~l~-~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 194 NIKKAAEDGAYLVSKMKAVGFL-YEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHTTCEEESSEEEEEEE-EETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHcCCeEEeccEEEEEE-EeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 4455678899999999999998 445566667653 343 689999999999653
No 430
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=96.03 E-value=0.0049 Score=72.79 Aligned_cols=38 Identities=18% Similarity=0.244 Sum_probs=34.6
Q ss_pred CCcEEEECCchHHHHHHHHHHhc-CCCCcEEEEcCCCCCCC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQN-GFTGKLYFITDENFLPY 1105 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~-g~~~~i~li~~~~~~~~ 1105 (1466)
+.+|+|||||++|++||..|++. |. +|+|+|++++++.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~--~v~v~E~~~~~GG 45 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDK--RVLVLERRPHIGG 45 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCC--CEEEECSSSSSSG
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCC--CEEEEeCCCCCCC
Confidence 57899999999999999999998 88 9999999987664
No 431
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.02 E-value=0.029 Score=69.60 Aligned_cols=54 Identities=11% Similarity=0.136 Sum_probs=41.1
Q ss_pred HHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEc---CCCC--eeecCEEEEeeccc
Q psy2951 1251 ERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANL---DNGT--TIPADLVIVGIGTV 1304 (1466)
Q Consensus 1251 ~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l---~~g~--~i~~D~vv~a~G~~ 1304 (1466)
..|.+.+++.||+++.++.++++...+++++.+|.. .+|+ ++.+|.||+|+|..
T Consensus 147 ~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 147 HTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 335566677899999999999998323567777764 5665 58999999999963
No 432
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=96.01 E-value=0.0052 Score=72.56 Aligned_cols=41 Identities=17% Similarity=0.213 Sum_probs=35.4
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHc-CCCccEEEEcCCCCCCCCC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQN-GFTGKLYFITDENFLPYDR 636 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~-g~~~~v~~~~~~~~~~~~~ 636 (1466)
..+||+|||||++||+||+.|++. |++ |+++|+++.+++..
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~--v~v~E~~~~~GG~~ 47 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKR--VLVLERRPHIGGNA 47 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCC--EEEECSSSSSSGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCC--EEEEeCCCCCCCee
Confidence 358999999999999999999999 987 88999987766543
No 433
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=95.99 E-value=0.0058 Score=69.12 Aligned_cols=34 Identities=26% Similarity=0.368 Sum_probs=30.5
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcC
Q psy2951 43 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITD 76 (1466)
Q Consensus 43 ~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~ 76 (1466)
++||+|||||+||+.||..|++.|.+|.|++...
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 3689999999999999999999999998877554
No 434
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=95.95 E-value=0.0033 Score=76.57 Aligned_cols=40 Identities=15% Similarity=0.263 Sum_probs=33.6
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcC----CCccEEEEcCCCCCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNG----FTGKLYFITDENFLPY 634 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g----~~~~v~~~~~~~~~~~ 634 (1466)
++||+|||||++||+||+.|+++| ...+|+++|+.+.+++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG 48 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGG 48 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCc
Confidence 579999999999999999999999 2234899999866554
No 435
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=95.92 E-value=0.0038 Score=76.77 Aligned_cols=39 Identities=26% Similarity=0.403 Sum_probs=35.0
Q ss_pred CCcEEEECCchHHHHHHHHHHhcC-CCCcEEEEcCCCCCCCC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNG-FTGKLYFITDENFLPYD 1106 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g-~~~~i~li~~~~~~~~~ 1106 (1466)
..+|+|||||+|||+||..|++.| . +|+|+|+++.++..
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~--~V~VlEa~~riGGr 47 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQ--DCLVLEARDRVGGR 47 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCC--SEEEECSSSSSBTT
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCC--CEEEEeCCCCCCCc
Confidence 358999999999999999999999 7 99999999876654
No 436
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=95.89 E-value=0.0066 Score=74.21 Aligned_cols=38 Identities=24% Similarity=0.473 Sum_probs=34.8
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY 1105 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~ 1105 (1466)
..+|+|||||+|||+||..|++.|. +|+|+|+++..+.
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~--~v~v~E~~~~~GG 48 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGY--KVTVLEARTRPGG 48 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSSSSCT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC--CEEEEeccCCCCC
Confidence 5689999999999999999999998 9999999987654
No 437
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=95.87 E-value=0.0055 Score=74.66 Aligned_cols=42 Identities=26% Similarity=0.308 Sum_probs=34.0
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCC
Q psy2951 592 SGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD 635 (1466)
Q Consensus 592 ~~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~ 635 (1466)
....+||+|||||++||+||+.|+++|++ |+++|+.+.+++.
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~--v~v~E~~~~~GGr 54 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSRGTD--AVLLESSARLGGA 54 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTTTCC--EEEECSSSSSBTT
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCC--EEEEEcCCCCCce
Confidence 34468999999999999999999999987 8889998766543
No 438
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=95.85 E-value=0.0067 Score=70.65 Aligned_cols=39 Identities=18% Similarity=0.375 Sum_probs=34.9
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCC
Q psy2951 1065 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY 1105 (1466)
Q Consensus 1065 ~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~ 1105 (1466)
...+|+|||||++|+++|..|++.|. +|+|+|+.++.+.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~--~v~v~E~~~~~GG 66 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQ--RVLIVDRRPHIGG 66 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTC--CEEEECSSSSSSG
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCC--ceEEEeccCCCCC
Confidence 35689999999999999999999998 9999999887653
No 439
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=95.85 E-value=0.0065 Score=70.95 Aligned_cols=35 Identities=17% Similarity=0.436 Sum_probs=32.2
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCC
Q psy2951 1065 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN 1101 (1466)
Q Consensus 1065 ~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~ 1101 (1466)
.+.+|+|||||++|+++|..|+++|. +|+|||++.
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~--~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGY--SVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCC--EEEEEeccC
Confidence 35789999999999999999999998 999999875
No 440
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=95.84 E-value=0.0066 Score=74.32 Aligned_cols=55 Identities=16% Similarity=0.229 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHhcC-cEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEcccc
Q psy2951 776 KEVGERITKLFESKG-VKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGT 832 (1466)
Q Consensus 776 ~~~~~~~~~~l~~~g-v~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 832 (1466)
..+.+.+.+.+.+.| ++++++++|++|+..+ +. ..|.+.+|+++.+|.||+|+|.
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~-~~-v~v~~~~g~~~~ad~vI~a~~~ 310 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNER-DA-ARVTARDGREFVAKRVVCTIPL 310 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECS-SS-EEEEETTCCEEEEEEEEECCCG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcC-CE-EEEEECCCCEEEcCEEEECCCH
Confidence 456677788888888 9999999999998543 33 3577788888999999999985
No 441
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=95.83 E-value=0.0036 Score=76.19 Aligned_cols=38 Identities=16% Similarity=0.315 Sum_probs=34.1
Q ss_pred CCcEEEECCchHHHHHHHHHHhcC------CCCcEEEEcCCCCCCC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNG------FTGKLYFITDENFLPY 1105 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g------~~~~i~li~~~~~~~~ 1105 (1466)
+++|+|||||++||+||..|+++| . +|+|+|+++..+.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~--~V~vlEa~~~~GG 48 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPL--ELTLVEASPRVGG 48 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSE--EEEEECSSSSSCT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCC--CEEEEECCCCCCc
Confidence 468999999999999999999998 6 9999999876653
No 442
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.82 E-value=0.027 Score=69.96 Aligned_cols=53 Identities=9% Similarity=0.076 Sum_probs=40.0
Q ss_pred HHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEc---CCCC--eeecCEEEEeecccc
Q psy2951 1252 RITKLFESKGVKFVMKANVSSFEKNEKNDVTAANL---DNGT--TIPADLVIVGIGTVL 1305 (1466)
Q Consensus 1252 ~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l---~~g~--~i~~D~vv~a~G~~p 1305 (1466)
.|.+.+++.||+++.++.+.++. .+++++.+|.. .+|+ .+.++.||+|+|...
T Consensus 160 ~L~~~~~~~gv~i~~~~~v~~Li-~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 160 TLYGRSLRYDTSYFVEYFALDLL-MENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHTTSCCEEEETEEEEEEE-EETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHhCCCEEEEceEEEEEE-EECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 34445566799999999999997 45667776665 4675 689999999999643
No 443
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=95.72 E-value=0.039 Score=68.99 Aligned_cols=54 Identities=11% Similarity=0.074 Sum_probs=40.3
Q ss_pred HHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEc---CCCC--eeecCEEEEeecccc
Q psy2951 1251 ERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANL---DNGT--TIPADLVIVGIGTVL 1305 (1466)
Q Consensus 1251 ~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l---~~g~--~i~~D~vv~a~G~~p 1305 (1466)
..|.+.+++.||+++.++.+.++. .+++++.+|.. .+|+ .+.||.||+|+|-..
T Consensus 162 ~~L~~~a~~~gv~i~~~~~v~~L~-~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 162 FAVANECLKLGVSIQDRKEAIALI-HQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHTCEEECSEEEEEEE-EETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHhCCCEEEECcEEEEEE-ecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 334555567799999999999997 35567766654 5675 489999999999543
No 444
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=95.69 E-value=0.0079 Score=72.70 Aligned_cols=40 Identities=25% Similarity=0.468 Sum_probs=34.9
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDR 636 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~ 636 (1466)
.+||+|||||++||+||+.|++.|++ |+++|+.+.+++..
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~--v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLS--VAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC--EEEECSSSSSCTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCc--EEEEECCCCCCCce
Confidence 47999999999999999999999988 88999987665543
No 445
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=95.66 E-value=0.0073 Score=73.60 Aligned_cols=39 Identities=28% Similarity=0.349 Sum_probs=34.1
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCC
Q psy2951 1065 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY 1105 (1466)
Q Consensus 1065 ~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~ 1105 (1466)
..++|+|||||++|++||..|++.|+ +|+|+|+++.++.
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~--~v~v~E~~~~~GG 53 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGT--DAVLLESSARLGG 53 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTC--CEEEECSSSSSBT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--CEEEEEcCCCCCc
Confidence 35689999999999999999999998 9999999987653
No 446
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=95.63 E-value=0.0074 Score=77.41 Aligned_cols=63 Identities=22% Similarity=0.326 Sum_probs=45.4
Q ss_pred cCcchhhhhhhhhhhcccCc----c-ccccCCCCCCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEc
Q psy2951 13 NDDSVVVQARKDELKNKKRK----L-PMAKLSSGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFIT 75 (1466)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~ 75 (1466)
.++|+.|..++++....... . +.........++|+|||||++||+||+.|++.|++|+|+|..
T Consensus 243 ~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~ 310 (852)
T 2xag_A 243 NSDTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEAR 310 (852)
T ss_dssp TSCHHHHHHHHHHHHHTTSSSCSSCBCSSCCCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCcHHHHHHHHHHHHHHHHhcCcccccCCcccCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEec
Confidence 47888888888776643211 1 111222345689999999999999999999999988776543
No 447
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=95.61 E-value=0.0076 Score=70.18 Aligned_cols=38 Identities=26% Similarity=0.482 Sum_probs=33.5
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCC
Q psy2951 596 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD 635 (1466)
Q Consensus 596 ~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~ 635 (1466)
+||+|||||++|+++|+.|++.|++ |+++|+.+.+++.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~--v~v~E~~~~~GG~ 39 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKK--VLVIEKRNHIGGN 39 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCC--EEEECSSSSSSGG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCc--EEEEecCCCCCcc
Confidence 6899999999999999999999987 8899988765543
No 448
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=95.60 E-value=0.0081 Score=73.51 Aligned_cols=56 Identities=18% Similarity=0.241 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHhCC-cEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccc
Q psy2951 1247 KEVGERITKLFESKG-VKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV 1304 (1466)
Q Consensus 1247 ~~~~~~l~~~~~~~g-v~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~ 1304 (1466)
..+.+.|.+.+++.| ++++++++|++|+. .++. ..|.+.+|+++.||.||+|+|..
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~-~~~~-v~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVN-ERDA-ARVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEE-CSSS-EEEEETTCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEE-cCCE-EEEEECCCCEEEcCEEEECCCHH
Confidence 456777888888898 99999999999983 3333 45888889889999999999953
No 449
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=95.60 E-value=0.0072 Score=76.39 Aligned_cols=63 Identities=22% Similarity=0.327 Sum_probs=45.1
Q ss_pred cCcchhhhhhhhhhhcccCc----cc-cccCCCCCCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEc
Q psy2951 13 NDDSVVVQARKDELKNKKRK----LP-MAKLSSGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFIT 75 (1466)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~ 75 (1466)
.++|+.|..++++....... .+ ..+....+.+||+|||||++|++||+.|++.|++|+|+|..
T Consensus 72 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~ 139 (662)
T 2z3y_A 72 NSDTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEAR 139 (662)
T ss_dssp GGCHHHHHHHHHHHHHTTSSSCSSCBCSSCCCSSCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCChHHHHHHHHHHHHHHHHhcCCccccCCCcccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecC
Confidence 46788888888766543211 11 11222345689999999999999999999999988776543
No 450
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=95.53 E-value=0.011 Score=67.03 Aligned_cols=34 Identities=24% Similarity=0.295 Sum_probs=31.7
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDEN 1101 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~ 1101 (1466)
|++|+|||||+||+.||..|++.|. +|+|||+.+
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~--~V~liE~~~ 34 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGV--PVRLFEMRP 34 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC--CEEEECCTT
T ss_pred CCCEEEECchHHHHHHHHHHHHCCC--cEEEEeccC
Confidence 4689999999999999999999999 999999876
No 451
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=95.53 E-value=0.0093 Score=73.19 Aligned_cols=38 Identities=21% Similarity=0.297 Sum_probs=34.9
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY 1105 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~ 1105 (1466)
.++|+|||||++||+||..|++.|+ +|+|+|+++..+.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~--~v~v~E~~~~~GG 50 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGL--NVTVFEAEGKAGG 50 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSC--EEEEECSSSSSCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--cEEEEEeCCCCCC
Confidence 5789999999999999999999998 9999999987654
No 452
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=95.46 E-value=0.0093 Score=69.43 Aligned_cols=37 Identities=30% Similarity=0.503 Sum_probs=33.5
Q ss_pred CcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCC
Q psy2951 1067 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY 1105 (1466)
Q Consensus 1067 ~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~ 1105 (1466)
.+|+|||||++|+++|..|++.|. +|+|+|++++++.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~--~v~v~E~~~~~GG 38 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNK--KVLVIEKRNHIGG 38 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTC--CEEEECSSSSSSG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC--cEEEEecCCCCCc
Confidence 479999999999999999999998 9999999886553
No 453
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=95.46 E-value=0.0096 Score=71.93 Aligned_cols=39 Identities=26% Similarity=0.469 Sum_probs=34.7
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD 1106 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~ 1106 (1466)
.++|+|||||++|++||..|++.|. +|+|+|+++..+..
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~--~v~v~E~~~~~GG~ 43 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGL--SVAVIEARDRVGGR 43 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC--CEEEECSSSSSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC--cEEEEECCCCCCCc
Confidence 3589999999999999999999998 89999998876543
No 454
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=95.45 E-value=0.0079 Score=72.95 Aligned_cols=36 Identities=25% Similarity=0.398 Sum_probs=30.4
Q ss_pred CCCCcEEEECCchHHHHHHHHHHhcC-CCCcEEEEcC
Q psy2951 41 GNKDTFIVVGGGPSGATCVETLRQNG-FTGKLYFITD 76 (1466)
Q Consensus 41 ~~~~dVvIIGgG~AGl~aA~~l~~~g-~~v~i~~~~~ 76 (1466)
++++||+|||||++||+||+.|++.| .++.|+|..+
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~ 43 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECND 43 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCC
Confidence 34689999999999999999999998 6777765443
No 455
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=95.45 E-value=0.011 Score=71.88 Aligned_cols=40 Identities=15% Similarity=0.178 Sum_probs=33.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY 634 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~ 634 (1466)
++||+|||||++||++|+.|++.|.+.+|+++|+.+..++
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG 43 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGG 43 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBT
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCc
Confidence 5799999999999999999999994445899998765544
No 456
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=95.44 E-value=0.0098 Score=72.36 Aligned_cols=40 Identities=15% Similarity=0.178 Sum_probs=34.3
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY 1105 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~ 1105 (1466)
+++|+|||||++|+++|..|++.|.+.+|+|+|+++..+.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG 43 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGG 43 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBT
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCc
Confidence 4689999999999999999999993239999999876543
No 457
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=95.40 E-value=0.011 Score=72.31 Aligned_cols=41 Identities=17% Similarity=0.257 Sum_probs=35.3
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCC
Q psy2951 593 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD 635 (1466)
Q Consensus 593 ~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~ 635 (1466)
..+++|+|||||++||+||+.|+++|++ |+++|+.+.+++.
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~--v~vlE~~~~~gg~ 71 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQ--VTVLEASERPGGR 71 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCE--EEEECSSSSSBTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCe--EEEEECCCCCCCc
Confidence 3468999999999999999999999987 8889988765553
No 458
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=95.38 E-value=0.011 Score=72.54 Aligned_cols=40 Identities=20% Similarity=0.292 Sum_probs=34.7
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD 635 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~ 635 (1466)
..++|+|||||++||+||+.|+++|++ |+++|+.+.+++.
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~--v~v~E~~~~~GG~ 51 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLN--VTVFEAEGKAGGK 51 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCE--EEEECSSSSSCSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCc--EEEEEeCCCCCCc
Confidence 358999999999999999999999987 8899998776553
No 459
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=95.29 E-value=0.013 Score=70.90 Aligned_cols=40 Identities=15% Similarity=0.192 Sum_probs=34.1
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcC-CCccEEEEcCCCCCCCC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNG-FTGKLYFITDENFLPYD 635 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g-~~~~v~~~~~~~~~~~~ 635 (1466)
..++|+|||||++||++|+.|+++| .+ |+++|+.+.+++.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~--v~v~E~~~~~GG~ 48 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKN--WHLYECNDTPGGL 48 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCS--EEEEESSSSSSGG
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCC--EEEEeCCCCCCCe
Confidence 4689999999999999999999998 56 8888888765543
No 460
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=95.29 E-value=0.013 Score=68.54 Aligned_cols=36 Identities=25% Similarity=0.474 Sum_probs=33.4
Q ss_pred CcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCC
Q psy2951 1067 DTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLP 1104 (1466)
Q Consensus 1067 ~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~ 1104 (1466)
.+|+|||||++|+++|..|++.|. +|+|+|++++.+
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~--~v~v~E~~~~~G 39 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGH--QVHIIDQRDHIG 39 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC--EEEEEESSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC--cEEEEEecCCcC
Confidence 589999999999999999999988 999999988765
No 461
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=95.24 E-value=0.0087 Score=69.47 Aligned_cols=35 Identities=14% Similarity=0.169 Sum_probs=29.9
Q ss_pred CeEEEEcCchHHHHHHHHHHHcC----CCccEEEEcCCC
Q psy2951 596 DTFIVVGGGPSGATCVETLRQNG----FTGKLYFITDEN 630 (1466)
Q Consensus 596 ~~vvVIGgG~AGl~aA~~l~~~g----~~~~v~~~~~~~ 630 (1466)
+||+|||||++|+++|+.|+++| ...+|+++|+..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 58999999999999999999998 223488888874
No 462
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.19 E-value=0.023 Score=67.84 Aligned_cols=127 Identities=16% Similarity=0.138 Sum_probs=77.2
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcccCcccccccCHhHhhhCCcEEEEceEEEEe
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKIISD 674 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i 674 (1466)
.++|+|||.|.+||++|+.|+++|++ |+..+.....+. ...++ .|+++..+... .
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~--v~~~D~~~~~~~--------------------~~~l~-~G~~~~~g~~~--~ 59 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVT--PRVMDTRMTPPG--------------------LDKLP-EAVERHTGSLN--D 59 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCC--CEEEESSSSCTT--------------------GGGSC-TTSCEEESSCC--H
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCE--EEEEECCCCcch--------------------hHHhh-CCCEEEECCCc--H
Confidence 47899999999999999999999998 555555432110 02345 68887766511 0
Q ss_pred ccccccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCC--CcEEEecCHHHHHhhcccCCCCCcEEEECCC---hHHHHH
Q psy2951 675 SELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGV--NKVFYLRTVEDANNIAPHITPESNVVVIGSS---FIGMEA 749 (1466)
Q Consensus 675 ~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~vvVvG~G---~~g~e~ 749 (1466)
+ . + . .+|.||+++|..+..|.+. .. ++...+...+-+.+. . +.+.|.|-|+. -+.--+
T Consensus 60 ---~--~--~----~-~~d~vV~s~gi~~~~p~~~-~a~~~~~~v~~~~~~~~~~---~-~~~vI~VTGTnGKTTT~~ml 122 (439)
T 2x5o_A 60 ---E--W--L----M-AADLIVASPGIALAHPSLS-AAADAGIEIVGDIELFCRE---A-QAPIVAITGSNGKSTVTTLV 122 (439)
T ss_dssp ---H--H--H----H-TCSEEEECTTSCTTCHHHH-HHHHTTCEEECHHHHHHHH---C-CSCEEEEECSSSHHHHHHHH
T ss_pred ---H--H--h----c-cCCEEEeCCCCCCCCHHHH-HHHHCCCcEEEHHHHHHHh---c-CCCEEEEECCCCHHHHHHHH
Confidence 0 0 0 1 4789999999877655544 21 123333333333222 2 25566676643 344456
Q ss_pred HHHHhccCCeEEEE
Q psy2951 750 AAFCASKVKSVTVV 763 (1466)
Q Consensus 750 A~~l~~~g~~V~lv 763 (1466)
+..|...|.++.+.
T Consensus 123 ~~iL~~~g~~~~~~ 136 (439)
T 2x5o_A 123 GEMAKAAGVNVGVG 136 (439)
T ss_dssp HHHHHHTTCCEEEE
T ss_pred HHHHHhcCCCEEEe
Confidence 66777778776644
No 463
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=95.19 E-value=0.014 Score=71.54 Aligned_cols=39 Identities=18% Similarity=0.282 Sum_probs=35.1
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCC
Q psy2951 1065 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY 1105 (1466)
Q Consensus 1065 ~~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~ 1105 (1466)
..++|+|||||++|++||..|++.|. +|+|+|+++..+.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~--~v~vlE~~~~~gg 70 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGH--QVTVLEASERPGG 70 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTC--EEEEECSSSSSBT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCC--eEEEEECCCCCCC
Confidence 35689999999999999999999998 9999999887654
No 464
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=95.12 E-value=0.014 Score=68.35 Aligned_cols=38 Identities=24% Similarity=0.402 Sum_probs=33.3
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY 634 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~ 634 (1466)
.++|+|||||++|+++|+.|++.|++ |+++|+++.+++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~--v~v~E~~~~~GG 40 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQ--VHIIDQRDHIGG 40 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCE--EEEEESSSSSSG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCc--EEEEEecCCcCC
Confidence 37999999999999999999999976 888888876654
No 465
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=95.10 E-value=0.019 Score=73.62 Aligned_cols=41 Identities=17% Similarity=0.340 Sum_probs=35.8
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCC
Q psy2951 593 GNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD 635 (1466)
Q Consensus 593 ~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~ 635 (1466)
...++|+|||||++||+||+.|+++|++ |+++|+...+++.
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~--v~v~E~~~~~GG~ 316 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMD--VTLLEARDRVGGR 316 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCE--EEEECSSSSSCTT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCc--EEEEEecCcCCCc
Confidence 4568999999999999999999999987 8899988766654
No 466
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.10 E-value=0.023 Score=67.93 Aligned_cols=131 Identities=19% Similarity=0.150 Sum_probs=77.6
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcccCcccccccCHhHhhhCCcEEEEceEEEE
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKIIS 673 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 673 (1466)
..++|+|||.|.+|+++|+.|+++|++ |+..+.... . .....+.+++.|++++.+..
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~--V~~~D~~~~---~---------------~~~~~~~L~~~gi~~~~g~~--- 64 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAI--VTVNDGKPF---D---------------ENPTAQSLLEEGIKVVCGSH--- 64 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCE--EEEEESSCG---G---------------GCHHHHHHHHTTCEEEESCC---
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCE--EEEEeCCcc---c---------------CChHHHHHHhCCCEEEECCC---
Confidence 368999999999999999999999988 666665431 0 01123456778999888762
Q ss_pred eccccccEEEccCCCEEecCEEEEcCCCCCCcCCCCCCCC--cEEEecCHHHHHhhcccCCCCCcEEEECC-Ch--HHHH
Q psy2951 674 DSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGVN--KVFYLRTVEDANNIAPHITPESNVVVIGS-SF--IGME 748 (1466)
Q Consensus 674 i~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~vvVvG~-G~--~g~e 748 (1466)
..+. . ++ .+|.||+++|..+..|.+. -.. ++..+...+-+..+. +.+-|.|-|+ |- +.--
T Consensus 65 ---~~~~---~-~~---~~d~vv~spgi~~~~p~~~-~a~~~gi~v~~~~e~~~~~~----~~~~IaVTGTnGKTTTt~m 129 (451)
T 3lk7_A 65 ---PLEL---L-DE---DFCYMIKNPGIPYNNPMVK-KALEKQIPVLTEVELAYLVS----ESQLIGITGSNGKTTTTTM 129 (451)
T ss_dssp ---CGGG---G-GS---CEEEEEECTTSCTTSHHHH-HHHHTTCCEECHHHHHHHHC----CSEEEEEECSSCHHHHHHH
T ss_pred ---hHHh---h-cC---CCCEEEECCcCCCCChhHH-HHHHCCCcEEeHHHHHHHhc----CCCEEEEECCCCHHHHHHH
Confidence 1100 0 00 2899999999877666432 100 222233333222221 2345555554 32 3344
Q ss_pred HHHHHhccCCeEEE
Q psy2951 749 AAAFCASKVKSVTV 762 (1466)
Q Consensus 749 ~A~~l~~~g~~V~l 762 (1466)
++..|...|.++.+
T Consensus 130 l~~iL~~~g~~~~~ 143 (451)
T 3lk7_A 130 IAEVLNAGGQRGLL 143 (451)
T ss_dssp HHHHHHHTTCCEEE
T ss_pred HHHHHHhcCCCEEE
Confidence 55667777776644
No 467
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=95.09 E-value=0.011 Score=68.58 Aligned_cols=34 Identities=15% Similarity=0.203 Sum_probs=30.2
Q ss_pred cEEEECCchHHHHHHHHHHhcC----CCCcEEEEcCCC
Q psy2951 1068 TFIVVGGGPSGATCVETLRQNG----FTGKLYFITDEN 1101 (1466)
Q Consensus 1068 ~vvIVG~G~aGl~aA~~L~~~g----~~~~i~li~~~~ 1101 (1466)
+|+|||||++|+++|..|+++| ...+|+|||++.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 7999999999999999999998 223999999875
No 468
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=95.08 E-value=0.01 Score=74.27 Aligned_cols=58 Identities=9% Similarity=0.125 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHhC--CcEEEcCceEEEEEecCC--CCeEEEEc---CCCc--EEeccEEEEeecccc
Q psy2951 225 EVGERITKLFESK--GVKFVMKANVSSFEKNEK--NDVTAANL---DNGT--TIPADLVIVGIGTVL 282 (1466)
Q Consensus 225 ~~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~--~~~~~v~~---~~g~--~i~~D~Vi~a~G~~p 282 (1466)
.+...+.+.+++. ||+++.++.+.++..+++ +++..+.. .+|+ .+.++.||+|||--.
T Consensus 167 ~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 167 SYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp SHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 4455566666666 888888888888765443 25655532 3443 578888999888544
No 469
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=95.05 E-value=0.018 Score=72.68 Aligned_cols=42 Identities=17% Similarity=0.344 Sum_probs=35.9
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCCCCCC
Q psy2951 592 SGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYD 635 (1466)
Q Consensus 592 ~~~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~~~~~ 635 (1466)
....++|+|||||++||+||+.|++.|++ |+++|+.+.+++.
T Consensus 104 ~~~~~~v~viG~G~~gl~~a~~l~~~g~~--v~~~e~~~~~gg~ 145 (662)
T 2z3y_A 104 TKKTGKVIIIGSGVSGLAAARQLQSFGMD--VTLLEARDRVGGR 145 (662)
T ss_dssp SSCCCEEEEECCBHHHHHHHHHHHHTTCE--EEEECSSSSSBTT
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCe--EEEEecCCCCCCc
Confidence 34578999999999999999999999987 8888988765543
No 470
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=95.01 E-value=0.021 Score=68.08 Aligned_cols=58 Identities=16% Similarity=0.224 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccccC
Q psy2951 1247 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLN 1306 (1466)
Q Consensus 1247 ~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~p~ 1306 (1466)
..+.+.|.+.+++.|++++++++|++|. .+++++..|. .+|+++.||.||+++|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~-~~~~~v~~v~-~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDII-MENGKVVGVK-SEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEE-EETTEEEEEE-ETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEE-EeCCEEEEEE-ECCeEEECCEEEECCCCCcc
Confidence 4677888888999999999999999998 4556666566 47888999999999998764
No 471
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=94.97 E-value=0.0081 Score=75.21 Aligned_cols=58 Identities=12% Similarity=0.072 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCCeEEEE---cCCCc--EEeccEEEEeecccc
Q psy2951 224 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAAN---LDNGT--TIPADLVIVGIGTVL 282 (1466)
Q Consensus 224 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~v~---~~~g~--~i~~D~Vi~a~G~~p 282 (1466)
..+...|.+.+.+.||++++++.+.++..++ +++..+. +.+|+ .+.++.||+|||--.
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQD-GKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecC-CEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 4566677777777899999999999886532 4554443 24565 488999999998643
No 472
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=94.78 E-value=0.027 Score=67.14 Aligned_cols=58 Identities=14% Similarity=0.213 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccccC
Q psy2951 776 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTVLN 835 (1466)
Q Consensus 776 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 835 (1466)
..+.+.+.+.+++.|+++++++.|++|... ++++..+. .+|+++.+|.||+++|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~-~~~v~~v~-~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIME-NGKVVGVK-SEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEE-TTEEEEEE-ETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEe-CCEEEEEE-ECCeEEECCEEEECCCCCcc
Confidence 467778888888999999999999999843 45555555 47788999999999998764
No 473
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=94.67 E-value=0.024 Score=67.41 Aligned_cols=58 Identities=22% Similarity=0.333 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCCCcEEecCEEEEccccc
Q psy2951 776 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV 833 (1466)
Q Consensus 776 ~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 833 (1466)
.++.+.+.+.+++.|+++++++.|++|..++++++..|.+.+|+++.||.||.++++.
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 5677888899999999999999999998545677888999999999999999999987
No 474
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.32 E-value=0.07 Score=60.64 Aligned_cols=80 Identities=10% Similarity=0.083 Sum_probs=55.2
Q ss_pred CCCeEEEEcCchHHHH-HHHHHHHcCCCccEEEEcCCCCCCCCCCccchhcccCcccccccCHhHhhhCCcEEEEceEEE
Q psy2951 594 NKDTFIVVGGGPSGAT-CVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKII 672 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~-aA~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 672 (1466)
.+++|.|||.|.+||+ +|..|+++|++ |+..|..... ...+.+++.|++++.+.
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~--V~~~D~~~~~--------------------~~~~~L~~~gi~v~~g~--- 57 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFE--VSGCDAKMYP--------------------PMSTQLEALGIDVYEGF--- 57 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCE--EEEEESSCCT--------------------THHHHHHHTTCEEEESC---
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCE--EEEEcCCCCc--------------------HHHHHHHhCCCEEECCC---
Confidence 4689999999999997 78999999998 6666654320 01234667799988765
Q ss_pred EeccccccEEEccCCCEEecCEEEEcCCCCCCcCCC
Q psy2951 673 SDSELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQ 708 (1466)
Q Consensus 673 ~i~~~~~~~v~~~~~~~~~~d~lviAtG~~~~~~~~ 708 (1466)
+... +.. ..+|.||+++|..+..|.+
T Consensus 58 ---~~~~----l~~---~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 58 ---DAAQ----LDE---FKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp ---CGGG----GGS---CCCSEEEECTTCCTTCHHH
T ss_pred ---CHHH----cCC---CCCCEEEECCCcCCCCHHH
Confidence 2111 000 2489999999987766543
No 475
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=94.31 E-value=0.015 Score=73.08 Aligned_cols=59 Identities=17% Similarity=0.162 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhC-Cc-EEEcCceEEEEEecCC--CCeEEEE---cCCCc--EEeccEEEEeeccccC
Q psy2951 225 EVGERITKLFESK-GV-KFVMKANVSSFEKNEK--NDVTAAN---LDNGT--TIPADLVIVGIGTVLN 283 (1466)
Q Consensus 225 ~~~~~l~~~l~~~-GV-~i~~~~~v~~i~~~~~--~~~~~v~---~~~g~--~i~~D~Vi~a~G~~p~ 283 (1466)
.+...+.+.+++. || ++++++.+.++..+++ +++..+. ..+|+ .+.++.||+|||--..
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATL 219 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcccc
Confidence 3455566666776 99 9999999999976543 2666554 25564 6899999999996543
No 476
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=94.15 E-value=0.038 Score=66.95 Aligned_cols=39 Identities=26% Similarity=0.416 Sum_probs=32.7
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCC-CccEEEEcCCCCCCC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGF-TGKLYFITDENFLPY 634 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~-~~~v~~~~~~~~~~~ 634 (1466)
..++|+|||||++|+++|+.|++.|+ + |+++|+.+.+++
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~--v~~~e~~~~~gg 42 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITD--LLILEATDHIGG 42 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCC--EEEECSSSSSBT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCc--eEEEeCCCCCCC
Confidence 35799999999999999999999997 6 888898866544
No 477
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.01 E-value=0.048 Score=65.01 Aligned_cols=128 Identities=16% Similarity=0.152 Sum_probs=80.4
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCCCCCCCchhhccCcccccccChhhhccCCcEEEcCCeEEEe
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPYDRVKLSKQLDIKADSILLRTEEFYKDNDIHVIKGKKIISD 1145 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 1145 (1466)
.++|+|||.|.+|+++|..|.++|+ +|+++|.....|.. .+++ .|+++..+... .
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~--~v~~~D~~~~~~~~--------------------~~l~-~G~~~~~g~~~--~ 59 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGV--TPRVMDTRMTPPGL--------------------DKLP-EAVERHTGSLN--D 59 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTC--CCEEEESSSSCTTG--------------------GGSC-TTSCEEESSCC--H
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCC--EEEEEECCCCcchh--------------------HHhh-CCCEEEECCCc--H
Confidence 3679999999999999999999999 99999886643211 2234 57777655411 0
Q ss_pred ecCCCCeEEecCCcEEecCeEEEecCCCCCcCCCCCCC--CcEEEecCHHHHHhhhcccCCCCeEEEEcCC---HHHHHH
Q psy2951 1146 SELNEKKIKLQDGTSIDFTKIYLATGSSPRTISQADGV--NKVFYLRTVEDANNIAPHITPESNVVVIGSS---FIGMEA 1220 (1466)
Q Consensus 1146 ~d~~~~~v~~~~g~~~~yd~lvlAtG~~~~~~~~~~g~--~~v~~~~~~~~~~~l~~~~~~~~~vvVvG~g---~~g~e~ 1220 (1466)
+ . + . .+|.+|+++|..+..|.+. .. +++..+...+-+.++ .+ .+.|.|-|.. -+..-+
T Consensus 60 -~----~--~----~-~~d~vV~s~gi~~~~p~~~-~a~~~~~~v~~~~~~~~~~---~~-~~vI~VTGTnGKTTT~~ml 122 (439)
T 2x5o_A 60 -E----W--L----M-AADLIVASPGIALAHPSLS-AAADAGIEIVGDIELFCRE---AQ-APIVAITGSNGKSTVTTLV 122 (439)
T ss_dssp -H----H--H----H-TCSEEEECTTSCTTCHHHH-HHHHTTCEEECHHHHHHHH---CC-SCEEEEECSSSHHHHHHHH
T ss_pred -H----H--h----c-cCCEEEeCCCCCCCCHHHH-HHHHCCCcEEEHHHHHHHh---cC-CCEEEEECCCCHHHHHHHH
Confidence 0 0 0 1 4789999999876554433 21 144455444443332 32 5566666642 345556
Q ss_pred HHHHhcCCCeEEEEc
Q psy2951 1221 AAFCASKVKSVTVVG 1235 (1466)
Q Consensus 1221 a~~l~~~g~~v~vv~ 1235 (1466)
+..|+..|.++.+..
T Consensus 123 ~~iL~~~g~~~~~~g 137 (439)
T 2x5o_A 123 GEMAKAAGVNVGVGG 137 (439)
T ss_dssp HHHHHHTTCCEEEEE
T ss_pred HHHHHhcCCCEEEec
Confidence 667777788766544
No 478
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=93.98 E-value=0.036 Score=70.60 Aligned_cols=38 Identities=21% Similarity=0.486 Sum_probs=34.2
Q ss_pred CCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcCCCCCCC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENFLPY 1105 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g~~~~i~li~~~~~~~~ 1105 (1466)
..+|+|||||++|++||..|++.|. +|+|+|+.+..+.
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~--~v~v~E~~~~~gg 373 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGI--KVTVLEAKDRIGG 373 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTC--EEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--cEEEEecccceec
Confidence 4789999999999999999999999 9999999876553
No 479
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=93.59 E-value=0.032 Score=68.92 Aligned_cols=63 Identities=19% Similarity=0.312 Sum_probs=43.9
Q ss_pred HHHHHHHhCCcEEEcCceEEEEEecCCCCeEEEEcCC---Cc--EE---eccEEEEeeccccCccccccCCc
Q psy2951 229 RITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDN---GT--TI---PADLVIVGIGTVLNTNYLDGKGV 292 (1466)
Q Consensus 229 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~v~~~~---g~--~i---~~D~Vi~a~G~~p~~~~l~~~gl 292 (1466)
.+....++.|+++++++.|++|..++ +++..|.+.+ |+ ++ .++.||+|+|.-....++...|+
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~~-~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGi 271 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRNG-SQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGI 271 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEET-TEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTB
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEeC-CEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCC
Confidence 44444445699999999999998653 4677776644 53 34 78999999998655555554443
No 480
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=93.34 E-value=0.057 Score=66.62 Aligned_cols=63 Identities=19% Similarity=0.310 Sum_probs=44.7
Q ss_pred HHHHHHHhcCcEEEccceEEEEEecCCCceEEEECCC---Cc--EE---ecCEEEEccccccCccccccCCc
Q psy2951 781 RITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDN---GT--TI---PADLVIVGIGTVLNTNYLDGKGV 844 (1466)
Q Consensus 781 ~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~v~~~~---g~--~i---~~D~vi~a~G~~p~~~~~~~~gl 844 (1466)
++....+..|+++++++.|++|..+ ++++..|++.+ |+ ++ .++.||+|+|......++..+|+
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~-~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGi 271 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRN-GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGI 271 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEE-TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTB
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCC
Confidence 4444444469999999999999843 45677777754 54 34 78999999998766566655444
No 481
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=93.31 E-value=0.033 Score=69.32 Aligned_cols=36 Identities=17% Similarity=0.329 Sum_probs=32.5
Q ss_pred CCcEEEECCchHHHHHHHHHHhcC--------CCCcEEEEcCCC-CC
Q psy2951 1066 KDTFIVVGGGPSGATCVETLRQNG--------FTGKLYFITDEN-FL 1103 (1466)
Q Consensus 1066 ~~~vvIVG~G~aGl~aA~~L~~~g--------~~~~i~li~~~~-~~ 1103 (1466)
.++|+|||||++||+||..|++.| + +|+|+|+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~--~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGI--DVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEE--EEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCc--eEEEEeccCccc
Confidence 358999999999999999999988 6 899999987 65
No 482
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=93.29 E-value=0.038 Score=66.92 Aligned_cols=33 Identities=27% Similarity=0.340 Sum_probs=27.7
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCC-CCcEEEE
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGF-TGKLYFI 74 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~-~v~i~~~ 74 (1466)
..+||+|||||++|+++|+.|++.|. ++.|+|.
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~ 36 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEA 36 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeC
Confidence 35799999999999999999999998 7777554
No 483
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.25 E-value=0.18 Score=53.02 Aligned_cols=105 Identities=13% Similarity=0.179 Sum_probs=66.4
Q ss_pred CCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEE
Q psy2951 1204 PESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTA 1283 (1466)
Q Consensus 1204 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~ 1283 (1466)
.+++|+|||+|.+|...+..|.+.|.+|+++.+.. .++ +.++.++.+++++... +.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~-------~~~----l~~l~~~~~i~~i~~~----~~--------- 85 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV-------SAE----INEWEAKGQLRVKRKK----VG--------- 85 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC-------CHH----HHHHHHTTSCEEECSC----CC---------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC-------CHH----HHHHHHcCCcEEEECC----CC---------
Confidence 38999999999999999999999999999998752 233 3444555567665321 11
Q ss_pred EEcCCCCeeecCEEEEeeccccCcc----ccccCCceeeCCCeEEeC--CCccccCCCEEEeccc
Q psy2951 1284 ANLDNGTTIPADLVIVGIGTVLNTN----YLDGKGVELNGQKAVVVN--EYLETNVPGVYAGGDI 1342 (1466)
Q Consensus 1284 v~l~~g~~i~~D~vv~a~G~~p~~~----~~~~~gl~~~~~G~i~vd--~~~~t~~~~v~a~GD~ 1342 (1466)
...--.+|+||.|||...... .++ .|+.++ .+| +.+.-..|.++--|+.
T Consensus 86 ----~~dL~~adLVIaAT~d~~~N~~I~~~ak-~gi~VN-----vvD~p~~~~f~~Paiv~rg~l 140 (223)
T 3dfz_A 86 ----EEDLLNVFFIVVATNDQAVNKFVKQHIK-NDQLVN-----MASSFSDGNIQIPAQFSRGRL 140 (223)
T ss_dssp ----GGGSSSCSEEEECCCCTHHHHHHHHHSC-TTCEEE-----C-----CCSEECCEEEEETTE
T ss_pred ----HhHhCCCCEEEECCCCHHHHHHHHHHHh-CCCEEE-----EeCCcccCeEEEeeEEEeCCE
Confidence 111125999999998654333 222 444443 123 3344446777777764
No 484
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=93.07 E-value=0.038 Score=68.76 Aligned_cols=36 Identities=19% Similarity=0.288 Sum_probs=30.3
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCC------ccEEEEcCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFT------GKLYFITDEN 630 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~------~~v~~~~~~~ 630 (1466)
.++|+|||||+|||+||+.|++.|.. .+|+++|+.+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccC
Confidence 47899999999999999999999821 3488888875
No 485
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.73 E-value=0.17 Score=53.14 Aligned_cols=75 Identities=15% Similarity=0.138 Sum_probs=52.5
Q ss_pred CCCcEEEECCChHHHHHHHHHhccCCeEEEEeecCccCccccCHHHHHHHHHHHHhcCcEEEccceEEEEEecCCCceEE
Q psy2951 733 PESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTA 812 (1466)
Q Consensus 733 ~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~~~ 812 (1466)
.+++|+|||||.+|...+..|.+.|.+|+++.+.. .++ +.+...+.+++++... +.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~-------~~~----l~~l~~~~~i~~i~~~----~~--------- 85 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV-------SAE----INEWEAKGQLRVKRKK----VG--------- 85 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC-------CHH----HHHHHHTTSCEEECSC----CC---------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC-------CHH----HHHHHHcCCcEEEECC----CC---------
Confidence 48999999999999999999999999999997642 233 3344445567665321 11
Q ss_pred EECCCCcEEecCEEEEccccccC
Q psy2951 813 ANLDNGTTIPADLVIVGIGTVLN 835 (1466)
Q Consensus 813 v~~~~g~~i~~D~vi~a~G~~p~ 835 (1466)
.+..-.+|+||.||+....
T Consensus 86 ----~~dL~~adLVIaAT~d~~~ 104 (223)
T 3dfz_A 86 ----EEDLLNVFFIVVATNDQAV 104 (223)
T ss_dssp ----GGGSSSCSEEEECCCCTHH
T ss_pred ----HhHhCCCCEEEECCCCHHH
Confidence 1111248999999987543
No 486
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.58 E-value=0.31 Score=58.06 Aligned_cols=34 Identities=24% Similarity=0.419 Sum_probs=29.8
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDE 629 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~ 629 (1466)
+.++|+|+|+|--|.+.|..|...|++ |++++++
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~--v~vId~d 35 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENND--ITIVDKD 35 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEE--EEEEESC
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCC--EEEEECC
Confidence 468999999999999999999999988 6677665
No 487
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.19 E-value=0.092 Score=62.73 Aligned_cols=87 Identities=21% Similarity=0.127 Sum_probs=61.8
Q ss_pred CCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEE
Q psy2951 1204 PESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTA 1283 (1466)
Q Consensus 1204 ~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~ 1283 (1466)
.+++|.|||.|.+|+.+|..|+++|.+|++.+..+... + ...+.+++.||+++.+.... +
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~----~-----~~~~~L~~~gi~~~~g~~~~------~----- 67 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDE----N-----PTAQSLLEEGIKVVCGSHPL------E----- 67 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGG----C-----HHHHHHHHTTCEEEESCCCG------G-----
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccC----C-----hHHHHHHhCCCEEEECCChH------H-----
Confidence 37899999999999999999999999999999865211 1 12345778899887653210 0
Q ss_pred EEcCCCCeee-cCEEEEeeccccCccc---cccCCce
Q psy2951 1284 ANLDNGTTIP-ADLVIVGIGTVLNTNY---LDGKGVE 1316 (1466)
Q Consensus 1284 v~l~~g~~i~-~D~vv~a~G~~p~~~~---~~~~gl~ 1316 (1466)
+ .-. +|+||+++|+.|..+. +++.|++
T Consensus 68 --~----~~~~~d~vv~spgi~~~~p~~~~a~~~gi~ 98 (451)
T 3lk7_A 68 --L----LDEDFCYMIKNPGIPYNNPMVKKALEKQIP 98 (451)
T ss_dssp --G----GGSCEEEEEECTTSCTTSHHHHHHHHTTCC
T ss_pred --h----hcCCCCEEEECCcCCCCChhHHHHHHCCCc
Confidence 0 012 8999999999887663 3344544
No 488
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.13 E-value=0.14 Score=58.24 Aligned_cols=78 Identities=18% Similarity=0.182 Sum_probs=57.1
Q ss_pred CCeEEEEcCCHHHHH-HHHHHhcCCCeEEEEcCCCcCCcccccHHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEE
Q psy2951 1205 ESNVVVIGSSFIGME-AAAFCASKVKSVTVVGRGAVPFQESLGKEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTA 1283 (1466)
Q Consensus 1205 ~~~vvVvG~g~~g~e-~a~~l~~~g~~v~vv~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~ 1283 (1466)
.++|.|||.|-+|+. +|..|.++|.+|++.+..+.+. ..+.+++.|++++.+... +.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~-----------~~~~L~~~gi~v~~g~~~------~~----- 61 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPP-----------MSTQLEALGIDVYEGFDA------AQ----- 61 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------HHHHHHHTTCEEEESCCG------GG-----
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcH-----------HHHHHHhCCCEEECCCCH------HH-----
Confidence 578999999999997 8889999999999999875321 234567789988754211 00
Q ss_pred EEcCCCCeeecCEEEEeeccccCccc
Q psy2951 1284 ANLDNGTTIPADLVIVGIGTVLNTNY 1309 (1466)
Q Consensus 1284 v~l~~g~~i~~D~vv~a~G~~p~~~~ 1309 (1466)
+.. ..+|+||++.|+.|..+.
T Consensus 62 --l~~---~~~d~vV~Spgi~~~~p~ 82 (326)
T 3eag_A 62 --LDE---FKADVYVIGNVAKRGMDV 82 (326)
T ss_dssp --GGS---CCCSEEEECTTCCTTCHH
T ss_pred --cCC---CCCCEEEECCCcCCCCHH
Confidence 000 248999999999887664
No 489
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.08 E-value=0.13 Score=61.34 Aligned_cols=53 Identities=19% Similarity=0.401 Sum_probs=39.3
Q ss_pred cEEEecCHHHHHhhhccc----CCCCeEEEEcCCHHHHHHHHHHhcCCCeEEEEcCCC
Q psy2951 1185 KVFYLRTVEDANNIAPHI----TPESNVVVIGSSFIGMEAAAFCASKVKSVTVVGRGA 1238 (1466)
Q Consensus 1185 ~v~~~~~~~~~~~l~~~~----~~~~~vvVvG~g~~g~e~a~~l~~~g~~v~vv~~~~ 1238 (1466)
.++...+.++..++.+.+ ++.++|+|+|||.+|..+|..|.+ ..+|++++.+.
T Consensus 211 ~v~~i~~~~~i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~-~~~v~iIE~d~ 267 (461)
T 4g65_A 211 EVFFVAASNHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQ-TYSVKLIERNL 267 (461)
T ss_dssp EEEEEEETTTHHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCH
T ss_pred EEEEEeccchHHHHHHhhccccccccEEEEEcchHHHHHHHHHhhh-cCceEEEecCH
Confidence 455554455555444433 347899999999999999999865 58999999874
No 490
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=91.72 E-value=0.086 Score=64.17 Aligned_cols=37 Identities=24% Similarity=0.436 Sum_probs=31.0
Q ss_pred CCCCCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEc
Q psy2951 39 SSGNKDTFIVVGGGPSGATCVETLRQNGFTGKLYFIT 75 (1466)
Q Consensus 39 ~~~~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~ 75 (1466)
.....+|++|||+|++|+.+|.+|++.|.+|.|+|..
T Consensus 7 ~~~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~ 43 (507)
T 1coy_A 7 ADGDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMG 43 (507)
T ss_dssp CTTCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CcCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECC
Confidence 3345689999999999999999999998887776544
No 491
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=91.54 E-value=0.22 Score=59.06 Aligned_cols=58 Identities=22% Similarity=0.333 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHhCCcEEEcCceEEEEEecCCCcEEEEEcCCCCeeecCEEEEeeccc
Q psy2951 1247 KEVGERITKLFESKGVKFVMKANVSSFEKNEKNDVTAANLDNGTTIPADLVIVGIGTV 1304 (1466)
Q Consensus 1247 ~~~~~~l~~~~~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g~~i~~D~vv~a~G~~ 1304 (1466)
.++.+.+.+.+++.|++++++++|++|...+++++.+|++.+|+++.||.||++.++.
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 5688889999999999999999999998326678899999999999999999999988
No 492
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=91.39 E-value=0.077 Score=65.28 Aligned_cols=35 Identities=20% Similarity=0.286 Sum_probs=28.4
Q ss_pred CCCcEEEECCchHHHHHHHHHHh-cCCCCcEEEEcC
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQ-NGFTGKLYFITD 76 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~-~g~~v~i~~~~~ 76 (1466)
..+|+||||||+||..+|.+|++ .+.+|.|+|...
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~ 51 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGE 51 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSB
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCC
Confidence 36999999999999999999998 566777765443
No 493
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=90.95 E-value=0.14 Score=62.95 Aligned_cols=37 Identities=24% Similarity=0.363 Sum_probs=31.4
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENF 631 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~ 631 (1466)
..+|+||||||.||+.+|.+|++.+. .+|+++|+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~-~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPN-VTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTT-SCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCC-CcEEEEecCCC
Confidence 35899999999999999999999862 34999998754
No 494
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=90.58 E-value=0.14 Score=62.82 Aligned_cols=58 Identities=17% Similarity=0.267 Sum_probs=43.3
Q ss_pred HhCCcEEEcCceEEEEEecCCCcEEEEEcCCC---CeeecCEEEEeeccccCccccccCCce
Q psy2951 1258 ESKGVKFVMKANVSSFEKNEKNDVTAANLDNG---TTIPADLVIVGIGTVLNTNYLDGKGVE 1316 (1466)
Q Consensus 1258 ~~~gv~~~~~~~v~~i~~~~~g~~~~v~l~~g---~~i~~D~vv~a~G~~p~~~~~~~~gl~ 1316 (1466)
...++.+++++.+.++. .+++++.+|...+. .++.++.||+|.|..-...+|..+|+.
T Consensus 222 ~r~nl~v~~~~~v~~i~-~~~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl~SGig 282 (526)
T 3t37_A 222 GRKNLTILTGSRVRRLK-LEGNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLMRSGIG 282 (526)
T ss_dssp TCTTEEEECSCEEEEEE-EETTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHHHTTEE
T ss_pred CCCCeEEEeCCEEEEEE-ecCCeEEEEEEEecCceEEEeecceEEcccccCCcchhhhccCC
Confidence 35689999999999998 45667777766433 356889999999976665677666653
No 495
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=90.51 E-value=0.16 Score=62.35 Aligned_cols=58 Identities=17% Similarity=0.209 Sum_probs=40.8
Q ss_pred HhCCcEEEcCceEEEEEecC-CCcEEEEEcC--CCC--eeec-CEEEEeeccccCccccccCCc
Q psy2951 1258 ESKGVKFVMKANVSSFEKNE-KNDVTAANLD--NGT--TIPA-DLVIVGIGTVLNTNYLDGKGV 1315 (1466)
Q Consensus 1258 ~~~gv~~~~~~~v~~i~~~~-~g~~~~v~l~--~g~--~i~~-D~vv~a~G~~p~~~~~~~~gl 1315 (1466)
++.++++++++.|+++...+ ++++++|++. +|. ++.| -.||+|+|..-...+|..+|+
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~SGI 280 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSGI 280 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHTTE
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHcCC
Confidence 45689999999999997432 5678888875 364 4566 469999997654445544543
No 496
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=90.40 E-value=0.13 Score=62.94 Aligned_cols=35 Identities=23% Similarity=0.561 Sum_probs=31.0
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCC
Q psy2951 594 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENF 631 (1466)
Q Consensus 594 ~~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~ 631 (1466)
..+|+||||||+||+.+|.+|++ |.+ |+++|+.+.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~--VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYK--VLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSC--EEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCc--EEEEecCCC
Confidence 35899999999999999999999 876 999998754
No 497
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=90.30 E-value=0.13 Score=62.89 Aligned_cols=59 Identities=25% Similarity=0.215 Sum_probs=43.1
Q ss_pred HHhCCcEEEcCceEEEEEecCC--CcEEEEEcC--CCC--ee---ecCEEEEeeccccCccccccCCc
Q psy2951 1257 FESKGVKFVMKANVSSFEKNEK--NDVTAANLD--NGT--TI---PADLVIVGIGTVLNTNYLDGKGV 1315 (1466)
Q Consensus 1257 ~~~~gv~~~~~~~v~~i~~~~~--g~~~~v~l~--~g~--~i---~~D~vv~a~G~~p~~~~~~~~gl 1315 (1466)
.++.|+++++++.|+++...++ +++.+|++. +|+ ++ .++.||+|+|..-+..+|..+|+
T Consensus 204 ~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGi 271 (536)
T 1ju2_A 204 GNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGV 271 (536)
T ss_dssp SCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTE
T ss_pred hcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHcCC
Confidence 4577999999999999974332 378888774 465 34 57899999998655556666665
No 498
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=90.28 E-value=0.14 Score=62.30 Aligned_cols=35 Identities=17% Similarity=0.206 Sum_probs=30.5
Q ss_pred CCCcEEEECCchHHHHHHHHHHhcCCCCcEEEEcC
Q psy2951 42 NKDTFIVVGGGPSGATCVETLRQNGFTGKLYFITD 76 (1466)
Q Consensus 42 ~~~dVvIIGgG~AGl~aA~~l~~~g~~v~i~~~~~ 76 (1466)
..+|++|||+|++|+.+|.+|++.|.++.|+|...
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 35899999999999999999999999888776544
No 499
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=90.00 E-value=0.24 Score=60.19 Aligned_cols=62 Identities=13% Similarity=0.134 Sum_probs=43.9
Q ss_pred HHHHHHhCCcEEEcCceEEEEEecCCC-cEEEEEcC--CC-----CeeecCEEEEeeccccCccccccCC
Q psy2951 1253 ITKLFESKGVKFVMKANVSSFEKNEKN-DVTAANLD--NG-----TTIPADLVIVGIGTVLNTNYLDGKG 1314 (1466)
Q Consensus 1253 l~~~~~~~gv~~~~~~~v~~i~~~~~g-~~~~v~l~--~g-----~~i~~D~vv~a~G~~p~~~~~~~~g 1314 (1466)
+....+..++++++++.|++|...+++ ++.+|+.. +| .++.|+.||+|+|..-...+|..+|
T Consensus 233 l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL~~Sg 302 (507)
T 1coy_A 233 LAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLVSMK 302 (507)
T ss_dssp HHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHHHhcc
Confidence 444334445999999999999843334 68888774 56 3678999999999865555555555
No 500
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=89.86 E-value=0.22 Score=60.44 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=31.1
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCccEEEEcCCCC
Q psy2951 595 KDTFIVVGGGPSGATCVETLRQNGFTGKLYFITDENF 631 (1466)
Q Consensus 595 ~~~vvVIGgG~AGl~aA~~l~~~g~~~~v~~~~~~~~ 631 (1466)
.+|++|||+|++|+.+|..|++.|.+ |+++|+...
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~--v~~~e~~~~ 39 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQ--TLMLEMGQL 39 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC--EEEEESSCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCc--EEEEeCCCC
Confidence 57999999999999999999999887 788887754
Done!