Your job contains 1 sequence.
>psy2956
MQIFATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEV
EGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANK
PNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQ
RAGRAGRTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVS
PISKASAQQRA
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2956
(251 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 824 3.6e-82 1
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 777 3.4e-77 1
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 770 1.9e-76 1
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 769 2.4e-76 1
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 769 2.4e-76 1
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 769 2.4e-76 1
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 769 2.4e-76 1
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 769 2.4e-76 1
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 769 2.4e-76 1
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 722 2.3e-71 1
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 722 2.3e-71 1
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 696 1.1e-70 2
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 691 3.7e-70 2
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 644 4.2e-63 1
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 638 1.8e-62 1
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 631 1.0e-61 1
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 604 7.3e-59 1
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 597 4.0e-58 1
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 523 2.8e-50 1
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 505 3.5e-47 1
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 505 3.5e-47 1
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 502 6.9e-47 1
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 502 7.0e-47 1
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 502 7.5e-47 1
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 502 7.5e-47 1
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 502 7.5e-47 1
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 502 7.6e-47 1
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 502 7.7e-47 1
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 502 7.9e-47 1
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 502 7.9e-47 1
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 501 9.5e-47 1
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 498 2.1e-46 1
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 496 3.5e-46 1
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 494 4.9e-46 1
UNIPROTKB|Q5SQH5 - symbol:DHX16 "Putative pre-mRNA-splici... 475 3.4e-45 1
UNIPROTKB|Q5JP46 - symbol:DHX16 "Putative pre-mRNA-splici... 474 4.4e-45 1
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 481 1.3e-44 1
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 478 1.8e-44 1
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 476 3.2e-44 1
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 476 3.7e-44 1
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 475 4.1e-44 1
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 475 4.1e-44 1
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 475 4.1e-44 1
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 475 4.1e-44 1
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 475 4.1e-44 1
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 475 4.1e-44 1
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 476 4.1e-44 1
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 476 4.2e-44 1
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 469 2.2e-43 1
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 465 4.9e-43 1
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 464 5.5e-43 1
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 465 6.0e-43 1
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 463 8.2e-43 1
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 459 1.2e-42 1
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 458 1.8e-42 1
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 444 1.5e-40 1
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 441 2.2e-40 1
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 441 2.2e-40 1
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 440 2.4e-40 1
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 437 4.5e-40 1
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 437 4.5e-40 1
SGD|S000005294 - symbol:PRP2 "RNA-dependent ATPase in the... 427 3.7e-39 1
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 414 6.1e-38 1
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 414 2.0e-37 1
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 414 2.0e-37 1
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 414 2.0e-37 1
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 414 2.0e-37 1
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 414 2.2e-37 1
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 414 2.2e-37 1
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 413 2.7e-37 1
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 391 6.8e-37 2
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 404 1.5e-36 1
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 397 2.9e-36 1
TAIR|locus:2010549 - symbol:AT1G27900 species:3702 "Arabi... 393 8.4e-36 1
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 398 9.4e-36 1
UNIPROTKB|I3LU50 - symbol:I3LU50 "Uncharacterized protein... 384 1.5e-35 1
GENEDB_PFALCIPARUM|PFL1525c - symbol:PFL1525c "pre-mRNA s... 216 2.9e-35 2
UNIPROTKB|Q8I5A4 - symbol:PFL1525c "Pre-mRNA splicing fac... 216 2.9e-35 2
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 388 3.5e-35 1
UNIPROTKB|G4MKC3 - symbol:MGG_02518 "ATP-dependent RNA he... 384 6.8e-35 1
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 390 7.2e-35 1
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 379 2.2e-34 1
UNIPROTKB|I3L1L6 - symbol:DHX33 "Putative ATP-dependent R... 361 2.7e-34 2
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 380 6.6e-34 1
UNIPROTKB|Q9H6R0 - symbol:DHX33 "Putative ATP-dependent R... 361 7.7e-34 2
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 362 1.0e-33 2
ASPGD|ASPL0000052850 - symbol:AN1363 species:162425 "Emer... 372 1.4e-33 1
UNIPROTKB|F1PRA1 - symbol:DHX33 "Uncharacterized protein"... 353 2.1e-33 2
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 370 2.9e-33 1
MGI|MGI:2445102 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) bo... 368 4.4e-33 1
UNIPROTKB|E2RQN1 - symbol:DHX35 "Uncharacterized protein"... 367 5.7e-33 1
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 367 5.8e-33 1
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 365 9.7e-33 1
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 364 1.3e-32 1
CGD|CAL0005059 - symbol:orf19.2818 species:5476 "Candida ... 366 2.1e-32 1
UNIPROTKB|F5GXM6 - symbol:DHX35 "Probable ATP-dependent R... 361 2.2e-32 1
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 361 2.3e-32 1
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 361 2.6e-32 1
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 358 4.9e-32 1
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 358 5.6e-32 1
WARNING: Descriptions of 187 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
Identities = 158/183 (86%), Positives = 164/183 (89%)
Query: 13 RQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQE 72
+QYFDNAPLM VPGRTHPVEIFYTPEPERDYLEAAIRTV+QIHMCEE+EGD+L+FLTGQE
Sbjct: 234 QQYFDNAPLMKVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQE 293
Query: 73 EIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVS 132
EIEEACKRIK+EIDNLG E GELKCIPLYSTLPPNLQQRIFE AP NG IGRKVVVS
Sbjct: 294 EIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVS 353
Query: 133 TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGK 192
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKAS TRPGK
Sbjct: 354 TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAGRTRPGK 413
Query: 193 CFR 195
CFR
Sbjct: 414 CFR 416
Score = 255 (94.8 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 53/54 (98%), Positives = 54/54 (100%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR+
Sbjct: 350 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRS 403
Score = 41 (19.5 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 91 EAGELKCIPLYSTLPPNLQQRIFEAAPANKPNG 123
+ +LK + + +TL Q+ F+ AP K G
Sbjct: 215 QRSDLKLVVMSATLDAGKFQQYFDNAPLMKVPG 247
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 148/181 (81%), Positives = 158/181 (87%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
YFDN PL+ +PGRTHPVEIFYTPEPERDYLEAAIRTV+QIHMCEE EGDVLLFLTGQEEI
Sbjct: 277 YFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEDEGDVLLFLTGQEEI 336
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
+EACKRIK+EID+LGP+ G++K IPLYSTLPP QQRIFE P KPNG IGRKVVVSTN
Sbjct: 337 DEACKRIKREIDDLGPDVGDIKIIPLYSTLPPQQQQRIFEPPPPRKPNGAIGRKVVVSTN 396
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV+ ISKAS TRPGKCF
Sbjct: 397 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCF 456
Query: 195 R 195
R
Sbjct: 457 R 457
Score = 247 (92.0 bits), Expect = 6.4e-20, P = 6.4e-20
Identities = 52/54 (96%), Positives = 53/54 (98%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV+ ISKASAQQRA
Sbjct: 391 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRA 444
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 147/181 (81%), Positives = 157/181 (86%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
YFDN PL+ +PGRTHPVEIFYTPEPERDYLEAAIRTV+QIHMCEE EGD+LLFLTGQEEI
Sbjct: 270 YFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEI 329
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
+EACKRIK+EID+LGPE G++K IPLYSTLPP QQRIFE P K NG IGRKVVVSTN
Sbjct: 330 DEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTN 389
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV+ ISKAS TRPGKCF
Sbjct: 390 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCF 449
Query: 195 R 195
R
Sbjct: 450 R 450
Score = 247 (92.0 bits), Expect = 6.3e-20, P = 6.3e-20
Identities = 52/54 (96%), Positives = 53/54 (98%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV+ ISKASAQQRA
Sbjct: 384 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRA 437
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 146/181 (80%), Positives = 157/181 (86%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
YFDN PL+ +PGRTHPVEIFYTPEPERDYLEAAIRTV+QIHMCEE EGD+LLFLTGQEEI
Sbjct: 303 YFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEI 362
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
+EACKRIK+E+D+LGPE G++K IPLYSTLPP QQRIFE P K NG IGRKVVVSTN
Sbjct: 363 DEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTN 422
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV+ ISKAS TRPGKCF
Sbjct: 423 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCF 482
Query: 195 R 195
R
Sbjct: 483 R 483
Score = 247 (92.0 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 52/54 (96%), Positives = 53/54 (98%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV+ ISKASAQQRA
Sbjct: 417 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRA 470
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 146/181 (80%), Positives = 157/181 (86%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
YFDN PL+ +PGRTHPVEIFYTPEPERDYLEAAIRTV+QIHMCEE EGD+LLFLTGQEEI
Sbjct: 303 YFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEI 362
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
+EACKRIK+E+D+LGPE G++K IPLYSTLPP QQRIFE P K NG IGRKVVVSTN
Sbjct: 363 DEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTN 422
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV+ ISKAS TRPGKCF
Sbjct: 423 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCF 482
Query: 195 R 195
R
Sbjct: 483 R 483
Score = 247 (92.0 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 52/54 (96%), Positives = 53/54 (98%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV+ ISKASAQQRA
Sbjct: 417 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRA 470
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 146/181 (80%), Positives = 157/181 (86%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
YFDN PL+ +PGRTHPVEIFYTPEPERDYLEAAIRTV+QIHMCEE EGD+LLFLTGQEEI
Sbjct: 303 YFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEI 362
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
+EACKRIK+E+D+LGPE G++K IPLYSTLPP QQRIFE P K NG IGRKVVVSTN
Sbjct: 363 DEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTN 422
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV+ ISKAS TRPGKCF
Sbjct: 423 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCF 482
Query: 195 R 195
R
Sbjct: 483 R 483
Score = 247 (92.0 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 52/54 (96%), Positives = 53/54 (98%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV+ ISKASAQQRA
Sbjct: 417 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRA 470
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 146/181 (80%), Positives = 157/181 (86%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
YFDN PL+ +PGRTHPVEIFYTPEPERDYLEAAIRTV+QIHMCEE EGD+LLFLTGQEEI
Sbjct: 303 YFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEI 362
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
+EACKRIK+E+D+LGPE G++K IPLYSTLPP QQRIFE P K NG IGRKVVVSTN
Sbjct: 363 DEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTN 422
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV+ ISKAS TRPGKCF
Sbjct: 423 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCF 482
Query: 195 R 195
R
Sbjct: 483 R 483
Score = 247 (92.0 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 52/54 (96%), Positives = 53/54 (98%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV+ ISKASAQQRA
Sbjct: 417 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRA 470
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 146/181 (80%), Positives = 157/181 (86%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
YFDN PL+ +PGRTHPVEIFYTPEPERDYLEAAIRTV+QIHMCEE EGD+LLFLTGQEEI
Sbjct: 303 YFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEI 362
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
+EACKRIK+E+D+LGPE G++K IPLYSTLPP QQRIFE P K NG IGRKVVVSTN
Sbjct: 363 DEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTN 422
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV+ ISKAS TRPGKCF
Sbjct: 423 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCF 482
Query: 195 R 195
R
Sbjct: 483 R 483
Score = 247 (92.0 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 52/54 (96%), Positives = 53/54 (98%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV+ ISKASAQQRA
Sbjct: 417 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRA 470
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 146/181 (80%), Positives = 157/181 (86%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
YFDN PL+ +PGRTHPVEIFYTPEPERDYLEAAIRTV+QIHMCEE EGD+LLFLTGQEEI
Sbjct: 303 YFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEI 362
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
+EACKRIK+E+D+LGPE G++K IPLYSTLPP QQRIFE P K NG IGRKVVVSTN
Sbjct: 363 DEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTN 422
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV+ ISKAS TRPGKCF
Sbjct: 423 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCF 482
Query: 195 R 195
R
Sbjct: 483 R 483
Score = 247 (92.0 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 52/54 (96%), Positives = 53/54 (98%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV+ ISKASAQQRA
Sbjct: 417 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRA 470
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 138/183 (75%), Positives = 154/183 (84%)
Query: 13 RQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQE 72
++YF++ PL++VPGRT PVEIF+TP E+DYLEAAIRTV+QIHM EEVEGD+LLFLTGQE
Sbjct: 245 QRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQE 304
Query: 73 EIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVS 132
EIEEACKRI +EI LG +AG L CIPLYSTLPP QQRIFE AP N+PNG I RK V+S
Sbjct: 305 EIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVIS 364
Query: 133 TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGK 192
TNIAETSLTIDGVVFVIDPGF+KQKVYNPRIRVESLLV PISKAS T+PGK
Sbjct: 365 TNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGK 424
Query: 193 CFR 195
CFR
Sbjct: 425 CFR 427
Score = 243 (90.6 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 51/63 (80%), Positives = 53/63 (84%)
Query: 189 RPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQ 248
RP V+STNIAETSLTIDGVVFVIDPGF+KQKVYNPRIRVESLLV PISKASA
Sbjct: 352 RPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAM 411
Query: 249 QRA 251
QRA
Sbjct: 412 QRA 414
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 138/183 (75%), Positives = 154/183 (84%)
Query: 13 RQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQE 72
++YF++ PL++VPGRT PVEIF+TP E+DYLEAAIRTV+QIHM EEVEGD+LLFLTGQE
Sbjct: 245 QRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQE 304
Query: 73 EIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVS 132
EIEEACKRI +EI LG +AG L CIPLYSTLPP QQRIFE AP N+PNG I RK V+S
Sbjct: 305 EIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVIS 364
Query: 133 TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGK 192
TNIAETSLTIDGVVFVIDPGF+KQKVYNPRIRVESLLV PISKAS T+PGK
Sbjct: 365 TNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGK 424
Query: 193 CFR 195
CFR
Sbjct: 425 CFR 427
Score = 243 (90.6 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 51/63 (80%), Positives = 53/63 (84%)
Query: 189 RPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQ 248
RP V+STNIAETSLTIDGVVFVIDPGF+KQKVYNPRIRVESLLV PISKASA
Sbjct: 352 RPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAM 411
Query: 249 QRA 251
QRA
Sbjct: 412 QRA 414
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 696 (250.1 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 137/200 (68%), Positives = 155/200 (77%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT ++YF APLM VPGR HPVEIFYT EPERDYLEAAIRTVVQIHMCE GD+
Sbjct: 224 ATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-PGDI 282
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGG 124
L+FLTG+EEIE+AC++I KE+ NLG + G +K +PLYSTLPP +QQ+IF+ AP GG
Sbjct: 283 LVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGG 342
Query: 125 -IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXX 183
GRK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPRIRVESLLVSPISKAS
Sbjct: 343 PAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSG 402
Query: 184 XXXXTRPGKCFRYIVVVSTN 203
TRPGKCFR S N
Sbjct: 403 RAGRTRPGKCFRLYTEKSFN 422
Score = 245 (91.3 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 49/54 (90%), Positives = 53/54 (98%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPRIRVESLLVSPISKASA QR+
Sbjct: 348 IVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRS 401
Score = 39 (18.8 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 94 ELKCIPLYSTLPPNLQQRIFEAAPANKPNG 123
+LK + + +TL Q F AP K G
Sbjct: 216 DLKLVVMSATLEAEKFQEYFSGAPLMKVPG 245
Score = 38 (18.4 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 206 ETSLTIDGVV---FVIDPGFAKQKVYNPRIRVESLLVS 240
E +LT G + F +DP +K + +P + ++S
Sbjct: 483 EGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILS 520
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 691 (248.3 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 137/200 (68%), Positives = 154/200 (77%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT + YF APLM VPGR HPVEIFYT EPERDYLEAAIRTVVQIHMCE GD+
Sbjct: 220 ATLEAEKFQDYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-PGDI 278
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGG 124
L+FLTG+EEIE+AC++I KE+ NLG + G +K +PLYSTLPP +QQ+IF+ AP GG
Sbjct: 279 LVFLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGG 338
Query: 125 I-GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXX 183
GRK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPRIRVESLLVSPISKAS
Sbjct: 339 PPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSG 398
Query: 184 XXXXTRPGKCFRYIVVVSTN 203
TRPGKCFR S N
Sbjct: 399 RAGRTRPGKCFRLYTEKSFN 418
Score = 245 (91.3 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 49/54 (90%), Positives = 53/54 (98%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPRIRVESLLVSPISKASA QR+
Sbjct: 344 IVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRS 397
Score = 38 (18.4 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 216 FVIDPGFAKQKVYNPRIRVESLLVS 240
F +DP AK + +P + ++S
Sbjct: 492 FPLDPQMAKMLIVSPEFNCSNEILS 516
Score = 37 (18.1 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 94 ELKCIPLYSTLPPNLQQRIFEAAPANKPNG 123
+LK + + +TL Q F AP K G
Sbjct: 212 DLKLVVMSATLEAEKFQDYFSGAPLMKVPG 241
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 127/186 (68%), Positives = 149/186 (80%)
Query: 13 RQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQE 72
+ YF+NAPL+ VPGRTHPVEI+YTPE +RDYL+AAIRTV+QIH E EGD+LLFLTG+E
Sbjct: 257 QNYFNNAPLLAVPGRTHPVEIYYTPEFQRDYLDAAIRTVLQIHATEG-EGDILLFLTGEE 315
Query: 73 EIEEACKRIKKEIDNLGPE--AGELKCIPLYSTLPPNLQQRIFEAAPAN-KPNGGIGRKV 129
EIE+AC++I E D L E G LK PLY +LPP+ QQ+IFE AP N PNG GRKV
Sbjct: 316 EIEDACRKISLEGDELVREQNCGPLKVYPLYGSLPPHQQQKIFEPAPTNPNPNGRPGRKV 375
Query: 130 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTR 189
++STNIAETSLTIDG+V+V+DPGF+KQKVYNPR+RVESLLVSPISKAS TR
Sbjct: 376 IISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQQRAGRAGRTR 435
Query: 190 PGKCFR 195
PGKCFR
Sbjct: 436 PGKCFR 441
Score = 249 (92.7 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 50/63 (79%), Positives = 58/63 (92%)
Query: 189 RPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQ 248
RPG+ V++STNIAETSLTIDG+V+V+DPGF+KQKVYNPR+RVESLLVSPISKASAQ
Sbjct: 370 RPGRK----VIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQ 425
Query: 249 QRA 251
QRA
Sbjct: 426 QRA 428
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 126/186 (67%), Positives = 151/186 (81%)
Query: 13 RQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQE 72
++YF++APL+ VPGRTHPVEIFYTPEPE+DY+EAAIRTV+QIH E+ EGD+LLFLTG+E
Sbjct: 262 QRYFNDAPLLAVPGRTHPVEIFYTPEPEQDYVEAAIRTVLQIHATED-EGDILLFLTGEE 320
Query: 73 EIEEACKRIKKEIDNLGPEA--GELKCIPLYSTLPPNLQQRIFEAAPA-NKPNGGIGRKV 129
EIE+A ++I E D + EA G LK LY +LPP++QQRIFE AP +P G GRKV
Sbjct: 321 EIEDAARKISLEGDEMIREADAGPLKVYTLYGSLPPHMQQRIFEPAPPPRRPGGRPGRKV 380
Query: 130 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTR 189
+VSTNIAETSLTIDG+V+V+DPGF+KQK+YNPRIRVESLLVSPISKAS TR
Sbjct: 381 IVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTR 440
Query: 190 PGKCFR 195
PGKCFR
Sbjct: 441 PGKCFR 446
Score = 250 (93.1 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 51/63 (80%), Positives = 58/63 (92%)
Query: 189 RPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQ 248
RPG+ V+VSTNIAETSLTIDG+V+V+DPGF+KQK+YNPRIRVESLLVSPISKASAQ
Sbjct: 375 RPGRK----VIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQ 430
Query: 249 QRA 251
QRA
Sbjct: 431 QRA 433
Score = 38 (18.4 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 94 ELKCIPLYSTLPPNLQQRIFEAAP 117
+LK I + +TL QR F AP
Sbjct: 246 DLKIIIMSATLDAQKFQRYFNDAP 269
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 125/185 (67%), Positives = 150/185 (81%)
Query: 13 RQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQE 72
++YF +APL+ VPGRT+PVEI+YT EPERDYLEAA+RTV+QIH+ EE GD+L+FLTG+E
Sbjct: 238 QKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHV-EEGPGDILVFLTGEE 296
Query: 73 EIEEACKRIKKEIDNLGPE--AGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVV 130
EIE+AC++I E D+L E AG LK PLY +LPPN QQRIFE P + +G GRKVV
Sbjct: 297 EIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSG-YGRKVV 355
Query: 131 VSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRP 190
+STNIAETSLTIDG+V+V+DPGF+KQK+YNPRIRVESLLVSPISKAS TRP
Sbjct: 356 ISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRP 415
Query: 191 GKCFR 195
GKCFR
Sbjct: 416 GKCFR 420
Score = 248 (92.4 bits), Expect = 4.6e-20, P = 4.6e-20
Identities = 48/54 (88%), Positives = 54/54 (100%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV+STNIAETSLTIDG+V+V+DPGF+KQK+YNPRIRVESLLVSPISKASAQQRA
Sbjct: 354 VVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRA 407
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 121/185 (65%), Positives = 147/185 (79%)
Query: 13 RQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQE 72
++YF++APL+ VPGRT+PVE++YTPE +RDYL++AIRTV+QIH EE GD+LLFLTG++
Sbjct: 256 QRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEA-GDILLFLTGED 314
Query: 73 EIEEACKRIKKEIDNLGPE--AGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVV 130
EIE+A ++I E D L E G L PLY +LPP+ QQRIFE AP + NG GRKVV
Sbjct: 315 EIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESH-NGRPGRKVV 373
Query: 131 VSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRP 190
+STNIAETSLTIDG+V+V+DPGF+KQKVYNPRIRVESLLVSPISKAS TRP
Sbjct: 374 ISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRP 433
Query: 191 GKCFR 195
GKCFR
Sbjct: 434 GKCFR 438
Score = 251 (93.4 bits), Expect = 9.4e-22, Sum P(2) = 9.4e-22
Identities = 52/63 (82%), Positives = 58/63 (92%)
Query: 189 RPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQ 248
RPG+ VV+STNIAETSLTIDG+V+V+DPGF+KQKVYNPRIRVESLLVSPISKASAQ
Sbjct: 367 RPGRK----VVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQ 422
Query: 249 QRA 251
QRA
Sbjct: 423 QRA 425
Score = 38 (18.4 bits), Expect = 9.4e-22, Sum P(2) = 9.4e-22
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 94 ELKCIPLYSTLPPNLQQRIFEAAP 117
+LK I + +TL QR F AP
Sbjct: 240 DLKIIIMSATLDAEKFQRYFNDAP 263
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 115/186 (61%), Positives = 144/186 (77%)
Query: 13 RQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQE 72
++YF AP++ VPGRTHPVEIFYT E ERDY+EA++RTV+QIH E EGD+LLFLTG+E
Sbjct: 270 QRYFFEAPILAVPGRTHPVEIFYTAEAERDYIEASVRTVLQIH-ATEAEGDILLFLTGEE 328
Query: 73 EIEEACKRIKKEIDNLGPEA--GELKCIPLYSTLPPNLQQRIFEAAPANKPNGGI-GRKV 129
EIE+ C++++ E+D L +A G ++ PLY TLPP QQ+IF AAP GG GRK
Sbjct: 329 EIEDVCRKVRLEVDELIRDADCGPMEVYPLYGTLPPQQQQKIFNAAPPPLKKGGRPGRKC 388
Query: 130 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTR 189
+V+TNIAETSLTIDG+V+V+DPGF+KQK+YN RIRVESLLV+PIS+AS TR
Sbjct: 389 IVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIRVESLLVTPISRASAQQRAGRAGRTR 448
Query: 190 PGKCFR 195
PGKCFR
Sbjct: 449 PGKCFR 454
Score = 233 (87.1 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 48/64 (75%), Positives = 57/64 (89%)
Query: 189 RPG-KCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASA 247
RPG KC +V+TNIAETSLTIDG+V+V+DPGF+KQK+YN RIRVESLLV+PIS+ASA
Sbjct: 383 RPGRKC-----IVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIRVESLLVTPISRASA 437
Query: 248 QQRA 251
QQRA
Sbjct: 438 QQRA 441
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 106/183 (57%), Positives = 131/183 (71%)
Query: 13 RQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQE 72
++YF+NAPL+ VPGR HPVEIFYT E +DYLE+A+RTV+ IH E GD+L+FLTG+E
Sbjct: 239 QKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHT-NEGTGDILVFLTGEE 297
Query: 73 EIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVS 132
EIE+ C +I++E G +K +PLYS+LP Q +IF+ RK +VS
Sbjct: 298 EIEDTCAKIQRETRERG--LPPMKTLPLYSSLPIYQQSKIFDTCKE--------RKCIVS 347
Query: 133 TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGK 192
TNIAETSLTIDG+VFV+DPGF+KQK YNPR RVESLLV+PISKAS TRPGK
Sbjct: 348 TNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGK 407
Query: 193 CFR 195
CFR
Sbjct: 408 CFR 410
Score = 230 (86.0 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 45/53 (84%), Positives = 50/53 (94%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+VSTNIAETSLTIDG+VFV+DPGF+KQK YNPR RVESLLV+PISKASA QRA
Sbjct: 345 IVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRA 397
Score = 48 (22.0 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 18/57 (31%), Positives = 24/57 (42%)
Query: 94 ELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVID 150
+LK I + +TL Q+ FE AP K G + + T A V VID
Sbjct: 223 DLKLIVMSATLEAGKFQKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVID 279
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 505 (182.8 bits), Expect = 3.5e-47, P = 3.5e-47
Identities = 98/182 (53%), Positives = 131/182 (71%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEE 73
+YF AP+ +PGRT PVEI YT EPE DYLEAA TV+QIH+ E GDVL+FLTGQEE
Sbjct: 702 EYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEP-PGDVLVFLTGQEE 760
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVST 133
I+ +C+ + + + ++GP+ EL +P+Y LP +Q RIF+ APA K RKVV++T
Sbjct: 761 IDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGK------RKVVIAT 814
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
NIAETSLTIDG+ +V+DPGF KQK+YNP+ ++SL+V+PIS+A+ T PGKC
Sbjct: 815 NIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKC 874
Query: 194 FR 195
+R
Sbjct: 875 YR 876
Score = 197 (74.4 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 35/54 (64%), Positives = 50/54 (92%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV++TNIAETSLTIDG+ +V+DPGF KQK+YNP+ ++SL+V+PIS+A+A+QR+
Sbjct: 810 VVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRS 863
Score = 42 (19.8 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 58 EEVEGDVLLFLTGQEEIEEACKRIKKEIDN 87
E+ E D++ L E E+ KR++KE D+
Sbjct: 123 EDNEDDLMAQLEKMEGRYESEKRLQKESDS 152
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 505 (182.8 bits), Expect = 3.5e-47, P = 3.5e-47
Identities = 98/182 (53%), Positives = 131/182 (71%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEE 73
+YF AP+ +PGRT PVEI YT EPE DYLEAA TV+QIH+ E GDVL+FLTGQEE
Sbjct: 702 EYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEP-PGDVLVFLTGQEE 760
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVST 133
I+ +C+ + + + ++GP+ EL +P+Y LP +Q RIF+ APA K RKVV++T
Sbjct: 761 IDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGK------RKVVIAT 814
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
NIAETSLTIDG+ +V+DPGF KQK+YNP+ ++SL+V+PIS+A+ T PGKC
Sbjct: 815 NIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKC 874
Query: 194 FR 195
+R
Sbjct: 875 YR 876
Score = 197 (74.4 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 35/54 (64%), Positives = 50/54 (92%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV++TNIAETSLTIDG+ +V+DPGF KQK+YNP+ ++SL+V+PIS+A+A+QR+
Sbjct: 810 VVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRS 863
Score = 42 (19.8 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 58 EEVEGDVLLFLTGQEEIEEACKRIKKEIDN 87
E+ E D++ L E E+ KR++KE D+
Sbjct: 123 EDNEDDLMAQLEKMEGRYESEKRLQKESDS 152
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 502 (181.8 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 97/182 (53%), Positives = 130/182 (71%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEE 73
QYF AP+ +PGRT+PVEI YT EPE DYL+A++ TV+QIH+ E GD+L+FLTGQEE
Sbjct: 675 QYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEP-PGDILVFLTGQEE 733
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVST 133
I+ AC+ + + + +LGP+ EL +P+YS LP +Q RIF+ AP P RKVV++T
Sbjct: 734 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAP---PGS---RKVVIAT 787
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
NIAETSLTIDG+ +V+DPGF KQKVYN + ++ L+V+PIS+A T PGKC
Sbjct: 788 NIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKC 847
Query: 194 FR 195
+R
Sbjct: 848 YR 849
Score = 191 (72.3 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 35/54 (64%), Positives = 47/54 (87%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++ L+V+PIS+A A+QRA
Sbjct: 783 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRA 836
Score = 43 (20.2 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 7 RRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLE 45
RR++L + + + N P R + + PE E D LE
Sbjct: 330 RRRNLVGETNEETSMRN-PDRPSHLSLVNAPEVEDDTLE 367
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 502 (181.8 bits), Expect = 7.0e-47, P = 7.0e-47
Identities = 97/182 (53%), Positives = 130/182 (71%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEE 73
QYF AP+ +PGRT+PVEI YT EPE DYL+A++ TV+QIH+ E GD+L+FLTGQEE
Sbjct: 727 QYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEP-PGDILVFLTGQEE 785
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVST 133
I+ AC+ + + + +LGP+ EL +P+YS LP +Q RIF+ AP P RKVV++T
Sbjct: 786 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAP---PGS---RKVVIAT 839
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
NIAETSLTIDG+ +V+DPGF KQKVYN + ++ L+V+PIS+A T PGKC
Sbjct: 840 NIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKC 899
Query: 194 FR 195
+R
Sbjct: 900 YR 901
Score = 191 (72.3 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 35/54 (64%), Positives = 47/54 (87%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++ L+V+PIS+A A+QRA
Sbjct: 835 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRA 888
Score = 50 (22.7 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 29/139 (20%), Positives = 62/139 (44%)
Query: 7 RRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLL 66
RR++L + + + N TH + + PE E D LE T + E++ +
Sbjct: 350 RRRNLVGETNEETSMRNPDRPTH-LSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAA 408
Query: 67 FLTGQEEIEEACKR--IKKEIDNLGPEAGELKCIPLYSTLPPNLQ---QRIFEAAP---A 118
+ +EE + + I ++D+ E +L+ I L PP L+ ++ + +P
Sbjct: 409 NVLSKEEFPDFDEETGILPKVDD--EEDEDLE-IELVEEEPPFLRGHTKQSMDMSPIKIV 465
Query: 119 NKPNGGIGRKVVVSTNIAE 137
P+G + + ++ + +A+
Sbjct: 466 KNPDGSLSQAAMMQSALAK 484
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 502 (181.8 bits), Expect = 7.5e-47, P = 7.5e-47
Identities = 97/182 (53%), Positives = 130/182 (71%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEE 73
QYF AP+ +PGRT+PVEI YT EPE DYL+A++ TV+QIH+ E GD+L+FLTGQEE
Sbjct: 696 QYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEP-PGDILVFLTGQEE 754
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVST 133
I+ AC+ + + + +LGP+ EL +P+YS LP +Q RIF+ AP P RKVV++T
Sbjct: 755 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAP---PGS---RKVVIAT 808
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
NIAETSLTIDG+ +V+DPGF KQKVYN + ++ L+V+PIS+A T PGKC
Sbjct: 809 NIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKC 868
Query: 194 FR 195
+R
Sbjct: 869 YR 870
Score = 191 (72.3 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 35/54 (64%), Positives = 47/54 (87%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++ L+V+PIS+A A+QRA
Sbjct: 804 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRA 857
Score = 50 (22.7 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 29/139 (20%), Positives = 62/139 (44%)
Query: 7 RRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLL 66
RR++L + + + N TH + + PE E D LE T + E++ +
Sbjct: 319 RRRNLVGETNEETSMRNPDRPTH-LSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAA 377
Query: 67 FLTGQEEIEEACKR--IKKEIDNLGPEAGELKCIPLYSTLPPNLQ---QRIFEAAP---A 118
+ +EE + + I ++D+ E +L+ I L PP L+ ++ + +P
Sbjct: 378 NVLSKEEFPDFDEETGILPKVDD--EEDEDLE-IELVEEEPPFLRGHTKQSMDMSPIKIV 434
Query: 119 NKPNGGIGRKVVVSTNIAE 137
P+G + + ++ + +A+
Sbjct: 435 KNPDGSLSQAAMMQSALAK 453
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 502 (181.8 bits), Expect = 7.5e-47, P = 7.5e-47
Identities = 97/182 (53%), Positives = 130/182 (71%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEE 73
QYF AP+ +PGRT+PVEI YT EPE DYL+A++ TV+QIH+ E GD+L+FLTGQEE
Sbjct: 719 QYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEP-PGDILVFLTGQEE 777
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVST 133
I+ AC+ + + + +LGP+ EL +P+YS LP +Q RIF+ AP P RKVV++T
Sbjct: 778 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAP---PGS---RKVVIAT 831
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
NIAETSLTIDG+ +V+DPGF KQKVYN + ++ L+V+PIS+A T PGKC
Sbjct: 832 NIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKC 891
Query: 194 FR 195
+R
Sbjct: 892 YR 893
Score = 191 (72.3 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 35/54 (64%), Positives = 47/54 (87%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++ L+V+PIS+A A+QRA
Sbjct: 827 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRA 880
Score = 50 (22.7 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 29/139 (20%), Positives = 62/139 (44%)
Query: 7 RRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLL 66
RR++L + + + N TH + + PE E D LE T + E++ +
Sbjct: 342 RRRNLVGETNEETSMRNPDRPTH-LSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAA 400
Query: 67 FLTGQEEIEEACKR--IKKEIDNLGPEAGELKCIPLYSTLPPNLQ---QRIFEAAP---A 118
+ +EE + + I ++D+ E +L+ I L PP L+ ++ + +P
Sbjct: 401 NVLSKEEFPDFDEETGILPKVDD--EEDEDLE-IELVEEEPPFLRGHTKQSMDMSPIKIV 457
Query: 119 NKPNGGIGRKVVVSTNIAE 137
P+G + + ++ + +A+
Sbjct: 458 KNPDGSLSQAAMMQSALAK 476
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 502 (181.8 bits), Expect = 7.5e-47, P = 7.5e-47
Identities = 97/182 (53%), Positives = 130/182 (71%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEE 73
QYF AP+ +PGRT+PVEI YT EPE DYL+A++ TV+QIH+ E GD+L+FLTGQEE
Sbjct: 723 QYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEP-PGDILVFLTGQEE 781
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVST 133
I+ AC+ + + + +LGP+ EL +P+YS LP +Q RIF+ AP P RKVV++T
Sbjct: 782 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAP---PGS---RKVVIAT 835
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
NIAETSLTIDG+ +V+DPGF KQKVYN + ++ L+V+PIS+A T PGKC
Sbjct: 836 NIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKC 895
Query: 194 FR 195
+R
Sbjct: 896 YR 897
Score = 191 (72.3 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 35/54 (64%), Positives = 47/54 (87%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++ L+V+PIS+A A+QRA
Sbjct: 831 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRA 884
Score = 50 (22.7 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 29/139 (20%), Positives = 62/139 (44%)
Query: 7 RRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLL 66
RR++L + + + N TH + + PE E D LE T + E++ +
Sbjct: 346 RRRNLVGETNEETSMRNPDRPTH-LSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAA 404
Query: 67 FLTGQEEIEEACKR--IKKEIDNLGPEAGELKCIPLYSTLPPNLQ---QRIFEAAP---A 118
+ +EE + + I ++D+ E +L+ I L PP L+ ++ + +P
Sbjct: 405 NVLSKEEFPDFDEETGILPKVDD--EEDEDLE-IELVEEEPPFLRGHTKQSMDMSPIKIV 461
Query: 119 NKPNGGIGRKVVVSTNIAE 137
P+G + + ++ + +A+
Sbjct: 462 KNPDGSLSQAAMMQSALAK 480
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 502 (181.8 bits), Expect = 7.6e-47, P = 7.6e-47
Identities = 97/182 (53%), Positives = 130/182 (71%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEE 73
QYF AP+ +PGRT+PVEI YT EPE DYL+A++ TV+QIH+ E GD+L+FLTGQEE
Sbjct: 727 QYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEP-PGDILVFLTGQEE 785
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVST 133
I+ AC+ + + + +LGP+ EL +P+YS LP +Q RIF+ AP P RKVV++T
Sbjct: 786 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAP---PGS---RKVVIAT 839
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
NIAETSLTIDG+ +V+DPGF KQKVYN + ++ L+V+PIS+A T PGKC
Sbjct: 840 NIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKC 899
Query: 194 FR 195
+R
Sbjct: 900 YR 901
Score = 191 (72.3 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 35/54 (64%), Positives = 47/54 (87%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++ L+V+PIS+A A+QRA
Sbjct: 835 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRA 888
Score = 50 (22.7 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 29/139 (20%), Positives = 62/139 (44%)
Query: 7 RRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLL 66
RR++L + + + N TH + + PE E D LE T + E++ +
Sbjct: 350 RRRNLVGETNEETSMRNPDRPTH-LSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAA 408
Query: 67 FLTGQEEIEEACKR--IKKEIDNLGPEAGELKCIPLYSTLPPNLQ---QRIFEAAP---A 118
+ +EE + + I ++D+ E +L+ I L PP L+ ++ + +P
Sbjct: 409 NVLSKEEFPDFDEETGILPKVDD--EEDEDLE-IELVEEEPPFLRGHTKQSMDMSPIKIV 465
Query: 119 NKPNGGIGRKVVVSTNIAE 137
P+G + + ++ + +A+
Sbjct: 466 KNPDGSLSQAAMMQSALAK 484
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 502 (181.8 bits), Expect = 7.7e-47, P = 7.7e-47
Identities = 97/182 (53%), Positives = 130/182 (71%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEE 73
QYF AP+ +PGRT+PVEI YT EPE DYL+A++ TV+QIH+ E GD+L+FLTGQEE
Sbjct: 737 QYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEP-PGDILVFLTGQEE 795
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVST 133
I+ AC+ + + + +LGP+ EL +P+YS LP +Q RIF+ AP P RKVV++T
Sbjct: 796 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAP---PGS---RKVVIAT 849
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
NIAETSLTIDG+ +V+DPGF KQKVYN + ++ L+V+PIS+A T PGKC
Sbjct: 850 NIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKC 909
Query: 194 FR 195
+R
Sbjct: 910 YR 911
Score = 191 (72.3 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 35/54 (64%), Positives = 47/54 (87%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++ L+V+PIS+A A+QRA
Sbjct: 845 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRA 898
Score = 50 (22.7 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 29/139 (20%), Positives = 62/139 (44%)
Query: 7 RRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLL 66
RR++L + + + N TH + + PE E D LE T + E++ +
Sbjct: 360 RRRNLVGETNEETSMRNPDRPTH-LSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAA 418
Query: 67 FLTGQEEIEEACKR--IKKEIDNLGPEAGELKCIPLYSTLPPNLQ---QRIFEAAP---A 118
+ +EE + + I ++D+ E +L+ I L PP L+ ++ + +P
Sbjct: 419 NVLSKEEFPDFDEETGILPKVDD--EEDEDLE-IELVEEEPPFLRGHTKQSMDMSPIKIV 475
Query: 119 NKPNGGIGRKVVVSTNIAE 137
P+G + + ++ + +A+
Sbjct: 476 KNPDGSLSQAAMMQSALAK 494
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 502 (181.8 bits), Expect = 7.9e-47, P = 7.9e-47
Identities = 97/182 (53%), Positives = 130/182 (71%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEE 73
QYF AP+ +PGRT+PVEI YT EPE DYL+A++ TV+QIH+ E GD+L+FLTGQEE
Sbjct: 749 QYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEP-PGDILVFLTGQEE 807
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVST 133
I+ AC+ + + + +LGP+ EL +P+YS LP +Q RIF+ AP P RKVV++T
Sbjct: 808 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAP---PGS---RKVVIAT 861
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
NIAETSLTIDG+ +V+DPGF KQKVYN + ++ L+V+PIS+A T PGKC
Sbjct: 862 NIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKC 921
Query: 194 FR 195
+R
Sbjct: 922 YR 923
Score = 191 (72.3 bits), Expect = 4.9e-16, Sum P(2) = 4.9e-16
Identities = 35/54 (64%), Positives = 47/54 (87%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++ L+V+PIS+A A+QRA
Sbjct: 857 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRA 910
Score = 50 (22.7 bits), Expect = 4.9e-16, Sum P(2) = 4.9e-16
Identities = 29/139 (20%), Positives = 62/139 (44%)
Query: 7 RRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLL 66
RR++L + + + N TH + + PE E D LE T + E++ +
Sbjct: 372 RRRNLVGETNEETSMRNPDRPTH-LSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAA 430
Query: 67 FLTGQEEIEEACKR--IKKEIDNLGPEAGELKCIPLYSTLPPNLQ---QRIFEAAP---A 118
+ +EE + + I ++D+ E +L+ I L PP L+ ++ + +P
Sbjct: 431 NVLSKEEFPDFDEETGILPKVDD--EEDEDLE-IELVEEEPPFLRGHTKQSMDMSPIKIV 487
Query: 119 NKPNGGIGRKVVVSTNIAE 137
P+G + + ++ + +A+
Sbjct: 488 KNPDGSLSQAAMMQSALAK 506
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 502 (181.8 bits), Expect = 7.9e-47, P = 7.9e-47
Identities = 97/182 (53%), Positives = 130/182 (71%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEE 73
QYF AP+ +PGRT+PVEI YT EPE DYL+A++ TV+QIH+ E GD+L+FLTGQEE
Sbjct: 751 QYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEP-PGDILVFLTGQEE 809
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVST 133
I+ AC+ + + + +LGP+ EL +P+YS LP +Q RIF+ AP P RKVV++T
Sbjct: 810 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAP---PGS---RKVVIAT 863
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
NIAETSLTIDG+ +V+DPGF KQKVYN + ++ L+V+PIS+A T PGKC
Sbjct: 864 NIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKC 923
Query: 194 FR 195
+R
Sbjct: 924 YR 925
Score = 191 (72.3 bits), Expect = 4.9e-16, Sum P(2) = 4.9e-16
Identities = 35/54 (64%), Positives = 47/54 (87%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++ L+V+PIS+A A+QRA
Sbjct: 859 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRA 912
Score = 50 (22.7 bits), Expect = 4.9e-16, Sum P(2) = 4.9e-16
Identities = 29/139 (20%), Positives = 62/139 (44%)
Query: 7 RRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLL 66
RR++L + + + N TH + + PE E D LE T + E++ +
Sbjct: 374 RRRNLVGETNEETSMRNPDRPTH-LSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAA 432
Query: 67 FLTGQEEIEEACKR--IKKEIDNLGPEAGELKCIPLYSTLPPNLQ---QRIFEAAP---A 118
+ +EE + + I ++D+ E +L+ I L PP L+ ++ + +P
Sbjct: 433 NVLSKEEFPDFDEETGILPKVDD--EEDEDLE-IELVEEEPPFLRGHTKQSMDMSPIKIV 489
Query: 119 NKPNGGIGRKVVVSTNIAE 137
P+G + + ++ + +A+
Sbjct: 490 KNPDGSLSQAAMMQSALAK 508
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 501 (181.4 bits), Expect = 9.5e-47, P = 9.5e-47
Identities = 96/182 (52%), Positives = 130/182 (71%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEE 73
QYF AP+ +PGRT+PVE+ YT EPE DYL+A++ TV+QIH+ E GD+L+FLTGQEE
Sbjct: 717 QYFYEAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVMQIHLTEP-PGDILVFLTGQEE 775
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVST 133
I+ AC+ + + + +LGP+ EL +P+YS LP +Q RIF+ AP P RKVV++T
Sbjct: 776 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAP---PGS---RKVVIAT 829
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
NIAETSLTIDG+ +V+DPGF KQKVYN + ++ L+V+PIS+A T PGKC
Sbjct: 830 NIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKC 889
Query: 194 FR 195
+R
Sbjct: 890 YR 891
Score = 191 (72.3 bits), Expect = 7.4e-16, Sum P(2) = 7.4e-16
Identities = 35/54 (64%), Positives = 47/54 (87%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV++TNIAETSLTIDG+ +V+DPGF KQKVYN + ++ L+V+PIS+A A+QRA
Sbjct: 825 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRA 878
Score = 48 (22.0 bits), Expect = 7.4e-16, Sum P(2) = 7.4e-16
Identities = 28/139 (20%), Positives = 64/139 (46%)
Query: 7 RRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLL 66
RR+++ + + + + N P R + + + PE E D LE T + E++ +
Sbjct: 340 RRRNVGGEGQEESAMRN-PDRPTNLNLGHAPEVEDDTLERKRLTKISDPEKWEIKQMIAA 398
Query: 67 FLTGQEEIEEACKR--IKKEIDNLGPEAGELKCIPLYSTLPPNLQ---QRIFEAAPAN-- 119
+ +EE + + I ++D+ E +L+ I L PP L+ ++ + +P
Sbjct: 399 NVLSKEEFPDFDEETGILPKVDD--EEDEDLE-IELVEEEPPFLRGHTKQSMDMSPVKIV 455
Query: 120 -KPNGGIGRKVVVSTNIAE 137
P+G + + ++ + +A+
Sbjct: 456 KNPDGSLSQAAMMQSALAK 474
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 498 (180.4 bits), Expect = 2.1e-46, P = 2.1e-46
Identities = 97/182 (53%), Positives = 130/182 (71%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEE 73
QYF AP+ +PGRT PVE+ YT EPE DYL+A++ TV+QIH+ E GD+LLFLTGQEE
Sbjct: 748 QYFFKAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHL-REPPGDILLFLTGQEE 806
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVST 133
I+ AC+ + + + +LGP+ EL +P+YS LP +Q RIF+ APA RKVV++T
Sbjct: 807 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGS------RKVVIAT 860
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
NIAETSLTIDG+ +V+DPGF KQKVYN + ++SL+V+PIS+A+ T PGK
Sbjct: 861 NIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKT 920
Query: 194 FR 195
+R
Sbjct: 921 YR 922
Score = 195 (73.7 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 41/87 (47%), Positives = 58/87 (66%)
Query: 165 VESLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAK 224
V L++ P+ A P + VV++TNIAETSLTIDG+ +V+DPGF K
Sbjct: 825 VPELIILPVYSALPSEMQTRIFDPAPAGSRK--VVIATNIAETSLTIDGIFYVVDPGFVK 882
Query: 225 QKVYNPRIRVESLLVSPISKASAQQRA 251
QKVYN + ++SL+V+PIS+A+A+QRA
Sbjct: 883 QKVYNSKTGMDSLVVTPISQAAAKQRA 909
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 496 (179.7 bits), Expect = 3.5e-46, P = 3.5e-46
Identities = 97/182 (53%), Positives = 129/182 (70%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEE 73
+YF P+ ++PGRT PVEI Y+ EPE DYL+AA+ TV+QIH+ E GD+LLFLTGQEE
Sbjct: 739 EYFYGCPIFSIPGRTFPVEIMYSKEPESDYLDAALITVMQIHLTEP-PGDMLLFLTGQEE 797
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVST 133
I+ AC+ + + + LGP EL +P+YS LP +Q RIF+ AP P G RKVV++T
Sbjct: 798 IDTACEILYERMKALGPSVPELVILPVYSALPSEMQSRIFDPAP---PGG---RKVVIAT 851
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
NIAETS+TID + +VIDPGF KQK Y+P++ ++SL+V+PIS+A T PGKC
Sbjct: 852 NIAETSITIDNIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRAGRAGRTGPGKC 911
Query: 194 FR 195
FR
Sbjct: 912 FR 913
Score = 188 (71.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 34/54 (62%), Positives = 48/54 (88%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV++TNIAETS+TID + +VIDPGF KQK Y+P++ ++SL+V+PIS+A A+QRA
Sbjct: 847 VVIATNIAETSITIDNIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRA 900
Score = 40 (19.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 26/102 (25%), Positives = 46/102 (45%)
Query: 39 PERDYLEAAIRT-VVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPE--AGEL 95
PER ++ I + V +++ + LTG+ EE + I E+ + P AG+
Sbjct: 406 PERWEIKQLIASGAVSAADYPDIDEEYHATLTGEGTFEEE-EDIDIEVRDEEPAFLAGQT 464
Query: 96 KCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAE 137
K + L P R+ +A P+G + R + TN+A+
Sbjct: 465 K---MSLELSPI---RVVKA-----PDGSMNRSAMAGTNLAK 495
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 494 (179.0 bits), Expect = 4.9e-46, P = 4.9e-46
Identities = 97/181 (53%), Positives = 126/181 (69%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
YF N + +PGRT PVEI YT +PE DYL+AA+ TV+QIH+ E EGD+L+FLTGQEEI
Sbjct: 678 YFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEP-EGDILVFLTGQEEI 736
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
+ AC+ + + + LG EL +P+YS LP +Q RIF+ P K RKVVV+TN
Sbjct: 737 DSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGK------RKVVVATN 790
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAE SLTIDG+ +V+DPGFAKQ VYNP+ +ESL+++PIS+AS T PGKC+
Sbjct: 791 IAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCY 850
Query: 195 R 195
R
Sbjct: 851 R 851
Score = 201 (75.8 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 42/62 (67%), Positives = 53/62 (85%)
Query: 190 PGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQ 249
PGK R VVV+TNIAE SLTIDG+ +V+DPGFAKQ VYNP+ +ESL+++PIS+ASA+Q
Sbjct: 780 PGK--RK-VVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQ 836
Query: 250 RA 251
RA
Sbjct: 837 RA 838
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 94/181 (51%), Positives = 124/181 (68%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+FD+AP+ +PGR PV+IFYT PE DYLEA + +V+QIH+ + GD+L+FLTGQEEI
Sbjct: 82 FFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQP-PGDILVFLTGQEEI 140
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E AC+ ++ LG + EL +P+Y+ LP ++Q RIF+ P P RKVVV+TN
Sbjct: 141 EAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTP---PGA---RKVVVATN 194
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTI+G+++V+DPGF KQK YNPR +ESL V+P SKAS GKCF
Sbjct: 195 IAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCF 254
Query: 195 R 195
R
Sbjct: 255 R 255
Score = 206 (77.6 bits), Expect = 9.2e-16, P = 9.2e-16
Identities = 48/89 (53%), Positives = 59/89 (66%)
Query: 164 RVESLLVSPI-SKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGF 222
++ LLV PI + T PG R VVV+TNIAETSLTI+G+++V+DPGF
Sbjct: 157 KIRELLVLPIYANLPSDMQARIFQPTPPGA--RK-VVVATNIAETSLTIEGIIYVLDPGF 213
Query: 223 AKQKVYNPRIRVESLLVSPISKASAQQRA 251
KQK YNPR +ESL V+P SKASA QRA
Sbjct: 214 CKQKSYNPRTGMESLTVTPCSKASANQRA 242
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 94/181 (51%), Positives = 123/181 (67%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+FD AP+ +PGR PV+IFYT PE DYLEA + +V+QIH+ + GD+L+FLTGQEEI
Sbjct: 82 FFDGAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQP-PGDILVFLTGQEEI 140
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E AC+ ++ LG + EL +P+Y+ LP ++Q RIF+ P P RKVVV+TN
Sbjct: 141 EAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTP---PGA---RKVVVATN 194
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTI+G+++V+DPGF KQK YNPR +ESL V+P SKAS GKCF
Sbjct: 195 IAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCF 254
Query: 195 R 195
R
Sbjct: 255 R 255
Score = 206 (77.6 bits), Expect = 9.2e-16, P = 9.2e-16
Identities = 48/89 (53%), Positives = 59/89 (66%)
Query: 164 RVESLLVSPI-SKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGF 222
++ LLV PI + T PG R VVV+TNIAETSLTI+G+++V+DPGF
Sbjct: 157 KIRELLVLPIYANLPSDMQARIFQPTPPGA--RK-VVVATNIAETSLTIEGIIYVLDPGF 213
Query: 223 AKQKVYNPRIRVESLLVSPISKASAQQRA 251
KQK YNPR +ESL V+P SKASA QRA
Sbjct: 214 CKQKSYNPRTGMESLTVTPCSKASANQRA 242
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 481 (174.4 bits), Expect = 1.3e-44, P = 1.3e-44
Identities = 96/197 (48%), Positives = 133/197 (67%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
YF+ P+ +PGRT PVEI Y+ +PE DYL+AA+ TV+QIH+ +E GD+LLFLTGQEEI
Sbjct: 705 YFNECPIFTIPGRTFPVEILYSKDPESDYLDAALTTVMQIHI-DEPPGDILLFLTGQEEI 763
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
+ +C+ + + + LGP EL +P+YS LP +Q RIF+ AP P RKVV++TN
Sbjct: 764 DTSCEILFERMKALGPSVPELIILPVYSALPNEMQSRIFDPAP---PGS---RKVVIATN 817
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETS+TID + +V+DPGF KQ Y+P++ ++SL+V+PIS+A T PGKCF
Sbjct: 818 IAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRAGRTGPGKCF 877
Query: 195 R-YI-VVVSTNIAETSL 209
R Y T + TS+
Sbjct: 878 RLYTEAAYQTEMLPTSI 894
Score = 183 (69.5 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 40/99 (40%), Positives = 59/99 (59%)
Query: 153 FAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTID 212
F + K P V L++ P+ A P + VV++TNIAETS+TID
Sbjct: 771 FERMKALGPS--VPELIILPVYSALPNEMQSRIFDPAPPGSRK--VVIATNIAETSITID 826
Query: 213 GVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+ +V+DPGF KQ Y+P++ ++SL+V+PIS+A A QRA
Sbjct: 827 HIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRA 865
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 478 (173.3 bits), Expect = 1.8e-44, P = 1.8e-44
Identities = 101/207 (48%), Positives = 128/207 (61%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT YFD+AP+ N+PGR +PV+I+YTP PE +YL AAI TV QIH + +GD+
Sbjct: 527 ATMNAEKFASYFDDAPIFNIPGRRYPVDIYYTPAPEANYLSAAITTVFQIHTTQP-KGDI 585
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGG 124
L+FLTGQ+EIE A +I + LG EL P+Y+ LP LQ +IFE P N
Sbjct: 586 LIFLTGQDEIEAAEMQITETARKLGSRVKELVICPIYANLPSELQSKIFEPTPEN----- 640
Query: 125 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXX 184
RKVV++TNIAETSLTIDG+V+VIDPG+ K+ VYNP + +L+V P S+AS
Sbjct: 641 -ARKVVLATNIAETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSRASANQRSGR 699
Query: 185 XXXTRPGKCFR-YIVVVSTNIAETSLT 210
PGKCFR Y N E S T
Sbjct: 700 AGRVGPGKCFRLYTKYAYMNEMEESTT 726
Score = 182 (69.1 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 40/88 (45%), Positives = 55/88 (62%)
Query: 164 RVESLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFA 223
RV+ L++ PI P + VV++TNIAETSLTIDG+V+VIDPG+
Sbjct: 612 RVKELVICPIYANLPSELQSKIFEPTPENARK--VVLATNIAETSLTIDGIVYVIDPGYV 669
Query: 224 KQKVYNPRIRVESLLVSPISKASAQQRA 251
K+ VYNP + +L+V P S+ASA QR+
Sbjct: 670 KENVYNPATGMSNLVVVPCSRASANQRS 697
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 476 (172.6 bits), Expect = 3.2e-44, P = 3.2e-44
Identities = 94/181 (51%), Positives = 124/181 (68%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+FD+AP+ +PGR PV+IFYT PE DYLEA + +V+QIH+ + GD+L+FLTGQEEI
Sbjct: 567 FFDDAPIFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQP-PGDILVFLTGQEEI 625
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E AC+ ++ LG + EL +P+Y+ LP ++Q RIF+ P P RKVVV+TN
Sbjct: 626 EAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTP---PGA---RKVVVATN 679
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTI+G+++V+DPGF KQK YNPR +ESL V+P SKAS GKCF
Sbjct: 680 IAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCF 739
Query: 195 R 195
R
Sbjct: 740 R 740
Score = 206 (77.6 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 48/89 (53%), Positives = 59/89 (66%)
Query: 164 RVESLLVSPI-SKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGF 222
++ LLV PI + T PG R VVV+TNIAETSLTI+G+++V+DPGF
Sbjct: 642 KIRELLVLPIYANLPSDMQARIFQPTPPGA--RK-VVVATNIAETSLTIEGIIYVLDPGF 698
Query: 223 AKQKVYNPRIRVESLLVSPISKASAQQRA 251
KQK YNPR +ESL V+P SKASA QRA
Sbjct: 699 CKQKSYNPRTGMESLTVTPCSKASANQRA 727
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 476 (172.6 bits), Expect = 3.7e-44, P = 3.7e-44
Identities = 94/181 (51%), Positives = 126/181 (69%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
YFD AP N+PGR + V YT PE DYL+AA+ TV+QIH+ E + GD+L+FLTGQEE+
Sbjct: 630 YFDGAPTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPL-GDILVFLTGQEEV 688
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
++A + ++ LG + EL +YSTLP +LQ +IFE P PN RKVV++TN
Sbjct: 689 DQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTP---PNA---RKVVLATN 742
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTIDG+++VIDPGF KQK++NPR +ESL+++P+S+AS PGKCF
Sbjct: 743 IAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCF 802
Query: 195 R 195
R
Sbjct: 803 R 803
Score = 201 (75.8 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 36/53 (67%), Positives = 49/53 (92%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
VV++TNIAETSLTIDG+++VIDPGF KQK++NPR +ESL+++P+S+ASA QR
Sbjct: 737 VVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQR 789
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 475 (172.3 bits), Expect = 4.1e-44, P = 4.1e-44
Identities = 94/181 (51%), Positives = 124/181 (68%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+FD+AP+ +PGR PV+IFYT PE DYLEA + +V+QIH+ + GD+L+FLTGQEEI
Sbjct: 563 FFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQP-PGDILVFLTGQEEI 621
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E AC+ ++ LG + EL +P+Y+ LP ++Q RIF+ P P RKVVV+TN
Sbjct: 622 EAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTP---PGA---RKVVVATN 675
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTI+G+++V+DPGF KQK YNPR +ESL V+P SKAS GKCF
Sbjct: 676 IAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCF 735
Query: 195 R 195
R
Sbjct: 736 R 736
Score = 206 (77.6 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 48/89 (53%), Positives = 59/89 (66%)
Query: 164 RVESLLVSPI-SKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGF 222
++ LLV PI + T PG R VVV+TNIAETSLTI+G+++V+DPGF
Sbjct: 638 KIRELLVLPIYANLPSDMQARIFQPTPPGA--RK-VVVATNIAETSLTIEGIIYVLDPGF 694
Query: 223 AKQKVYNPRIRVESLLVSPISKASAQQRA 251
KQK YNPR +ESL V+P SKASA QRA
Sbjct: 695 CKQKSYNPRTGMESLTVTPCSKASANQRA 723
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 475 (172.3 bits), Expect = 4.1e-44, P = 4.1e-44
Identities = 94/181 (51%), Positives = 124/181 (68%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+FD+AP+ +PGR PV+IFYT PE DYLEA + +V+QIH+ + GD+L+FLTGQEEI
Sbjct: 564 FFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQP-PGDILVFLTGQEEI 622
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E AC+ ++ LG + EL +P+Y+ LP ++Q RIF+ P P RKVVV+TN
Sbjct: 623 EAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTP---PGA---RKVVVATN 676
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTI+G+++V+DPGF KQK YNPR +ESL V+P SKAS GKCF
Sbjct: 677 IAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCF 736
Query: 195 R 195
R
Sbjct: 737 R 737
Score = 206 (77.6 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 48/89 (53%), Positives = 59/89 (66%)
Query: 164 RVESLLVSPI-SKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGF 222
++ LLV PI + T PG R VVV+TNIAETSLTI+G+++V+DPGF
Sbjct: 639 KIRELLVLPIYANLPSDMQARIFQPTPPGA--RK-VVVATNIAETSLTIEGIIYVLDPGF 695
Query: 223 AKQKVYNPRIRVESLLVSPISKASAQQRA 251
KQK YNPR +ESL V+P SKASA QRA
Sbjct: 696 CKQKSYNPRTGMESLTVTPCSKASANQRA 724
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 475 (172.3 bits), Expect = 4.1e-44, P = 4.1e-44
Identities = 94/181 (51%), Positives = 124/181 (68%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+FD+AP+ +PGR PV+IFYT PE DYLEA + +V+QIH+ + GD+L+FLTGQEEI
Sbjct: 566 FFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQP-PGDILVFLTGQEEI 624
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E AC+ ++ LG + EL +P+Y+ LP ++Q RIF+ P P RKVVV+TN
Sbjct: 625 EAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTP---PGA---RKVVVATN 678
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTI+G+++V+DPGF KQK YNPR +ESL V+P SKAS GKCF
Sbjct: 679 IAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCF 738
Query: 195 R 195
R
Sbjct: 739 R 739
Score = 206 (77.6 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 48/89 (53%), Positives = 59/89 (66%)
Query: 164 RVESLLVSPI-SKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGF 222
++ LLV PI + T PG R VVV+TNIAETSLTI+G+++V+DPGF
Sbjct: 641 KIRELLVLPIYANLPSDMQARIFQPTPPGA--RK-VVVATNIAETSLTIEGIIYVLDPGF 697
Query: 223 AKQKVYNPRIRVESLLVSPISKASAQQRA 251
KQK YNPR +ESL V+P SKASA QRA
Sbjct: 698 CKQKSYNPRTGMESLTVTPCSKASANQRA 726
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 475 (172.3 bits), Expect = 4.1e-44, P = 4.1e-44
Identities = 99/189 (52%), Positives = 127/189 (67%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
YFD AP+ + PGR +PVEI YT PE DY++AAI T++ IH+ E + GD+L+F TGQEEI
Sbjct: 567 YFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPL-GDILVFFTGQEEI 625
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E A + +K I LG + EL P+Y+ LP LQ +IFE P P G RKVV++TN
Sbjct: 626 ETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFE--PT--PEGA--RKVVLATN 679
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTIDG+ +V+DPGF+K K YNPR +ESLL++PISKAS T PGKC+
Sbjct: 680 IAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCY 739
Query: 195 RYIVVVSTN 203
R + N
Sbjct: 740 RLYTAFNYN 748
Score = 202 (76.2 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 39/54 (72%), Positives = 48/54 (88%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV++TNIAETSLTIDG+ +V+DPGF+K K YNPR +ESLL++PISKASA QRA
Sbjct: 674 VVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRA 727
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 475 (172.3 bits), Expect = 4.1e-44, P = 4.1e-44
Identities = 94/181 (51%), Positives = 124/181 (68%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+FD+AP+ +PGR PV+IFYT PE DYLEA + +V+QIH+ + GD+L+FLTGQEEI
Sbjct: 567 FFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQP-PGDILVFLTGQEEI 625
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E AC+ ++ LG + EL +P+Y+ LP ++Q RIF+ P P RKVVV+TN
Sbjct: 626 EAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTP---PGA---RKVVVATN 679
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTI+G+++V+DPGF KQK YNPR +ESL V+P SKAS GKCF
Sbjct: 680 IAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCF 739
Query: 195 R 195
R
Sbjct: 740 R 740
Score = 206 (77.6 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 48/89 (53%), Positives = 59/89 (66%)
Query: 164 RVESLLVSPI-SKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGF 222
++ LLV PI + T PG R VVV+TNIAETSLTI+G+++V+DPGF
Sbjct: 642 KIRELLVLPIYANLPSDMQARIFQPTPPGA--RK-VVVATNIAETSLTIEGIIYVLDPGF 698
Query: 223 AKQKVYNPRIRVESLLVSPISKASAQQRA 251
KQK YNPR +ESL V+P SKASA QRA
Sbjct: 699 CKQKSYNPRTGMESLTVTPCSKASANQRA 727
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 475 (172.3 bits), Expect = 4.1e-44, P = 4.1e-44
Identities = 94/181 (51%), Positives = 124/181 (68%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+FD+AP+ +PGR PV+IFYT PE DYLEA + +V+QIH+ + GD+L+FLTGQEEI
Sbjct: 567 FFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQP-PGDILVFLTGQEEI 625
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E AC+ ++ LG + EL +P+Y+ LP ++Q RIF+ P P RKVVV+TN
Sbjct: 626 EAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTP---PGA---RKVVVATN 679
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTI+G+++V+DPGF KQK YNPR +ESL V+P SKAS GKCF
Sbjct: 680 IAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCF 739
Query: 195 R 195
R
Sbjct: 740 R 740
Score = 206 (77.6 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 48/89 (53%), Positives = 59/89 (66%)
Query: 164 RVESLLVSPI-SKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGF 222
++ LLV PI + T PG R VVV+TNIAETSLTI+G+++V+DPGF
Sbjct: 642 KIRELLVLPIYANLPSDMQARIFQPTPPGA--RK-VVVATNIAETSLTIEGIIYVLDPGF 698
Query: 223 AKQKVYNPRIRVESLLVSPISKASAQQRA 251
KQK YNPR +ESL V+P SKASA QRA
Sbjct: 699 CKQKSYNPRTGMESLTVTPCSKASANQRA 727
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 476 (172.6 bits), Expect = 4.1e-44, P = 4.1e-44
Identities = 97/191 (50%), Positives = 132/191 (69%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT +YF NA L +PGRT PV+I YT +PE DYL+A++ TV+QIH+ E GD+
Sbjct: 661 ATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEP-PGDI 719
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGG 124
LLFLTGQEEI+ AC+ + + + +LG +L +P+YS LP +Q +IFE AP P
Sbjct: 720 LLFLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAP---PGS- 775
Query: 125 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXX 184
RKVV++TNIAETSLTIDG+ +VIDPGF+KQK +NP+ ++SL+V+PIS+A+
Sbjct: 776 --RKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGR 833
Query: 185 XXXTRPGKCFR 195
T PGKC+R
Sbjct: 834 AGRTGPGKCYR 844
Score = 190 (71.9 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 35/54 (64%), Positives = 50/54 (92%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV++TNIAETSLTIDG+ +VIDPGF+KQK +NP+ ++SL+V+PIS+A+A+QR+
Sbjct: 778 VVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRS 831
Score = 36 (17.7 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 107 NLQQRIFEAAPANKPNGGIGRKVVVSTNIAE 137
N+QQ + KPNG + R T +++
Sbjct: 397 NMQQ-LSPIKIVKKPNGSLQRAASTQTALSK 426
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 476 (172.6 bits), Expect = 4.2e-44, P = 4.2e-44
Identities = 92/181 (50%), Positives = 126/181 (69%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
YF P+ +PGR++PVEI YT +PE DYL+AA+ TV+QIH+ E GD+L+FLTGQEEI
Sbjct: 674 YFYKCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEG-PGDILVFLTGQEEI 732
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
+ +C+ + + LG EL +P+YS LP +Q RIFE AP P G RKVV++TN
Sbjct: 733 DTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAP---PGG---RKVVIATN 786
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTIDG+ +V+DPGF KQ ++P++ ++SL+V+PIS+A T PGKC+
Sbjct: 787 IAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCY 846
Query: 195 R 195
R
Sbjct: 847 R 847
Score = 183 (69.5 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 32/54 (59%), Positives = 48/54 (88%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV++TNIAETSLTIDG+ +V+DPGF KQ ++P++ ++SL+V+PIS+A A+QR+
Sbjct: 781 VVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRS 834
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 469 (170.2 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 102/207 (49%), Positives = 133/207 (64%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT + YFDNAP+ N+PGR + V+I YT +PE +YL AAI TV QIH+ + GD+
Sbjct: 635 ATMDAQKFQSYFDNAPIFNIPGRMYNVDIHYTQQPEANYLAAAITTVFQIHVSQG-PGDI 693
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGG 124
L+FLTGQEEIE A + +++ LG + E+ P+Y+ LP +LQ +IFE P P
Sbjct: 694 LVFLTGQEEIEAAEQSLQETARKLGNKIPEMIICPIYANLPSDLQAKIFEPTP---PKA- 749
Query: 125 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXX 184
RKVV++TNIAETSLTIDG+V+VIDPGF K+ V+NPR +ESL+V+P S+AS
Sbjct: 750 --RKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASANQRAGR 807
Query: 185 XXXTRPGKCFR-YIVVVSTNIAETSLT 210
PGKCFR Y N E S T
Sbjct: 808 AGRVGPGKCFRLYTKWAYYNELEESTT 834
Score = 199 (75.1 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 42/88 (47%), Positives = 58/88 (65%)
Query: 164 RVESLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFA 223
++ +++ PI P K + VV++TNIAETSLTIDG+V+VIDPGF
Sbjct: 720 KIPEMIICPIYANLPSDLQAKIFEPTPPKARK--VVLATNIAETSLTIDGIVYVIDPGFV 777
Query: 224 KQKVYNPRIRVESLLVSPISKASAQQRA 251
K+ V+NPR +ESL+V+P S+ASA QRA
Sbjct: 778 KENVFNPRTGMESLVVTPCSRASANQRA 805
Score = 36 (17.7 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 8/39 (20%), Positives = 15/39 (38%)
Query: 48 IRTVVQIHMCEEVEGDVLLFL-TGQEEIEEACKRIKKEI 85
+ T ++ + FL G EE+ C + K +
Sbjct: 27 LATATSAKSSSSLQDKIAPFLDAGAEEVSSFCSELYKRV 65
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 465 (168.7 bits), Expect = 4.9e-43, P = 4.9e-43
Identities = 97/181 (53%), Positives = 124/181 (68%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+FD AP+ PGR +PV+I +T PE DY++AAI TV+ IH+ E + GDVL+FL GQEEI
Sbjct: 567 FFDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVLTIHVKEPL-GDVLVFLPGQEEI 625
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E + +K +I LG + EL P+Y+ LP LQ +IFE P P G RKVV++TN
Sbjct: 626 EAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFE--PT--PEGA--RKVVLATN 679
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTIDG+ +V+DPGF+K K YNPR +ESLLV+PISKAS T PGKC+
Sbjct: 680 IAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCY 739
Query: 195 R 195
R
Sbjct: 740 R 740
Score = 201 (75.8 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 45/96 (46%), Positives = 59/96 (61%)
Query: 155 KQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGV 214
K K+ ++ L++ PI P + VV++TNIAETSLTIDG+
Sbjct: 633 KHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARK--VVLATNIAETSLTIDGI 690
Query: 215 VFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+V+DPGF+K K YNPR +ESLLV+PISKASA QR
Sbjct: 691 KYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQR 726
Score = 37 (18.1 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 71 QEEIEEACKRIKKEIDNLG 89
+ EI E K+ +E DN+G
Sbjct: 269 KREIYELIKKSTQEEDNVG 287
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 464 (168.4 bits), Expect = 5.5e-43, P = 5.5e-43
Identities = 91/191 (47%), Positives = 127/191 (66%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT + +YF+N P++ +PGRT PVE+ YT PE DYL AA+ +V+QIH+ E GD+
Sbjct: 493 ATLDSNKFSRYFNNCPIITIPGRTFPVEVLYTKAPEMDYLAAALESVIQIHVSEPA-GDI 551
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGG 124
L+FLTGQEEIE +C+ + + + LG EL +P+YS LP +Q RIFE P P
Sbjct: 552 LVFLTGQEEIETSCEALHERMKLLGENIPELIILPVYSALPSEMQTRIFEPTP---PGS- 607
Query: 125 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXX 184
RKV+++TNIAETS+TIDG+ +V+DPGF K +Y+ ++ ++SL V+PISKA
Sbjct: 608 --RKVILATNIAETSITIDGIYYVVDPGFVKINMYDSKLGMDSLRVTPISKAQANQRSGR 665
Query: 185 XXXTRPGKCFR 195
T PGKC+R
Sbjct: 666 AGRTGPGKCYR 676
Score = 168 (64.2 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 37/88 (42%), Positives = 56/88 (63%)
Query: 165 VESLLVSPISKA-SXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFA 223
+ L++ P+ A T PG R V+++TNIAETS+TIDG+ +V+DPGF
Sbjct: 579 IPELIILPVYSALPSEMQTRIFEPTPPGS--RK-VILATNIAETSITIDGIYYVVDPGFV 635
Query: 224 KQKVYNPRIRVESLLVSPISKASAQQRA 251
K +Y+ ++ ++SL V+PISKA A QR+
Sbjct: 636 KINMYDSKLGMDSLRVTPISKAQANQRS 663
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 465 (168.7 bits), Expect = 6.0e-43, P = 6.0e-43
Identities = 90/182 (49%), Positives = 122/182 (67%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEE 73
+YF N P++N+PG+T PVE+ Y+ P+ DY+EAA+ V+ IH+ E GD+L+FLTGQEE
Sbjct: 645 EYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHI-NEGPGDILVFLTGQEE 703
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVST 133
I+ C+ + + LG GEL +P+YS LP +Q +IFE P P G RKVV +T
Sbjct: 704 IDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFE--PT--PKGS--RKVVFAT 757
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
NIAETS+TIDG+ +V+DPGFAK +YN R +E L+VSPIS+A T PGKC
Sbjct: 758 NIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKC 817
Query: 194 FR 195
+R
Sbjct: 818 YR 819
Score = 181 (68.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 41/86 (47%), Positives = 53/86 (61%)
Query: 165 VESLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAK 224
+ LL+ P+ A P K R VV +TNIAETS+TIDG+ +V+DPGFAK
Sbjct: 722 IGELLILPVYSALPSEIQSKIFEPTP-KGSRK-VVFATNIAETSITIDGIYYVVDPGFAK 779
Query: 225 QKVYNPRIRVESLLVSPISKASAQQR 250
+YN R +E L+VSPIS+A A QR
Sbjct: 780 INIYNARAGIEQLIVSPISQAQANQR 805
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 463 (168.0 bits), Expect = 8.2e-43, P = 8.2e-43
Identities = 91/181 (50%), Positives = 123/181 (67%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+FD+AP+ +PGR PV+I+YT PE DYLEA + +V+QIH+ + GDVL+FLTGQEEI
Sbjct: 576 FFDDAPVFRIPGRRFPVDIYYTKAPEADYLEACVVSVLQIHVTQS-PGDVLVFLTGQEEI 634
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E C+ +++ LG + EL +P+Y+ LP ++Q +IF P P RKVVV+TN
Sbjct: 635 EACCELLQERCRRLGSKISELLVLPIYANLPSDMQAKIFNPTP---PGA---RKVVVATN 688
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTIDG+++VIDPGF KQK YN + +ESL+V+P S+AS GKCF
Sbjct: 689 IAETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSRASANQRAGRAGRVAAGKCF 748
Query: 195 R 195
R
Sbjct: 749 R 749
Score = 201 (75.8 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 47/89 (52%), Positives = 59/89 (66%)
Query: 164 RVESLLVSPI-SKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGF 222
++ LLV PI + T PG R VVV+TNIAETSLTIDG+++VIDPGF
Sbjct: 651 KISELLVLPIYANLPSDMQAKIFNPTPPGA--RK-VVVATNIAETSLTIDGIIYVIDPGF 707
Query: 223 AKQKVYNPRIRVESLLVSPISKASAQQRA 251
KQK YN + +ESL+V+P S+ASA QRA
Sbjct: 708 CKQKSYNAKTGMESLIVTPCSRASANQRA 736
Score = 39 (18.8 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 40 ERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIP 99
ER+ +A +I M EE + +L L Q + KR ++++++L E + +
Sbjct: 200 ERNDKKAYEEAQKRIKMAEEDKRKMLPELRKQSRRQYLSKREQEKLEDLEAEIKDEEY-- 257
Query: 100 LYSTLPPNLQQR 111
L+ST NL R
Sbjct: 258 LFST--QNLTDR 267
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 459 (166.6 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 88/182 (48%), Positives = 124/182 (68%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEE 73
Q+F+NAP++N+PGR PV+I YT +PE +Y++AAI T+ QIHM + + GD+L+FLTGQ+E
Sbjct: 395 QFFNNAPILNIPGRRFPVKIHYTKQPEANYIQAAITTIFQIHMTQPLPGDILVFLTGQDE 454
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVST 133
IE + ++ I LG + + +Y+ LP LQQ+IF+ P+N RK+V++T
Sbjct: 455 IETMEEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNT------RKIVLAT 508
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
NIAETS+TIDG+ +VIDPG+ KQ VYNP +ESL+V P S+AS PGKC
Sbjct: 509 NIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAGRVGPGKC 568
Query: 194 FR 195
FR
Sbjct: 569 FR 570
Score = 184 (69.8 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+V++TNIAETS+TIDG+ +VIDPG+ KQ VYNP +ESL+V P S+ASA QRA
Sbjct: 504 IVLATNIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRA 557
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 458 (166.3 bits), Expect = 1.8e-42, P = 1.8e-42
Identities = 91/181 (50%), Positives = 124/181 (68%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+FD+AP+ +PGR +PV+IFYT PE DY++A +V+QIH + + GD+L+FLTGQ+EI
Sbjct: 416 FFDDAPIFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPL-GDILVFLTGQDEI 474
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E + + + LG + EL IP+Y+ LP ++Q +IFE P PN RKV+++TN
Sbjct: 475 ETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTP---PNA---RKVILATN 528
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLTID +++VIDPGFAKQ +N R +ESL+V PISKAS T PGKCF
Sbjct: 529 IAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCF 588
Query: 195 R 195
R
Sbjct: 589 R 589
Score = 188 (71.2 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 37/54 (68%), Positives = 46/54 (85%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+++TNIAETSLTID +++VIDPGFAKQ +N R +ESL+V PISKASA QRA
Sbjct: 523 VILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRA 576
Score = 43 (20.2 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 70 GQEEIEEACKRIKKE 84
G+ IEEA KR+K E
Sbjct: 57 GRRAIEEATKRLKLE 71
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 444 (161.4 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 81/181 (44%), Positives = 126/181 (69%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+F + P+ +PGRT PV++ ++ P DY+++A++ ++ IH+ + V GD+L+F+TGQE+I
Sbjct: 822 FFGDVPVFTIPGRTFPVDVLWSKTPCEDYVDSAVKQILSIHVTQGV-GDILVFMTGQEDI 880
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E C +++ I LGP+A L +P+YS LP ++Q +IFE A NG RK +++TN
Sbjct: 881 ETTCATVEERIKQLGPQAPPLTLLPIYSQLPSDMQAKIFEKAD----NGS--RKCIIATN 934
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLT+DG+++VID G+ K KVYNPR+ ++SL V+PISKA+ T PG+C+
Sbjct: 935 IAETSLTVDGILYVIDTGYCKLKVYNPRVGMDSLQVTPISKANANQRSGRAGRTGPGRCY 994
Query: 195 R 195
R
Sbjct: 995 R 995
Score = 185 (70.2 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 33/53 (62%), Positives = 47/53 (88%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+++TNIAETSLT+DG+++VID G+ K KVYNPR+ ++SL V+PISKA+A QR+
Sbjct: 930 IIATNIAETSLTVDGILYVIDTGYCKLKVYNPRVGMDSLQVTPISKANANQRS 982
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 441 (160.3 bits), Expect = 2.2e-40, P = 2.2e-40
Identities = 86/178 (48%), Positives = 123/178 (69%)
Query: 18 NAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEA 77
N P +PGRT PVE+F+ P DY++AA++ V IH+ ++GD+L+F+ GQE+IE
Sbjct: 608 NCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHL-GGMDGDILIFMPGQEDIECT 666
Query: 78 CKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAE 137
C+ IK+++ L EA L +P+YS LP +LQ +IF+ AP GG+ RK +V+TNIAE
Sbjct: 667 CEMIKEKLGELD-EAPPLAVLPIYSQLPSDLQAKIFQRAP-----GGM-RKAIVATNIAE 719
Query: 138 TSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
TSLT+DG++FVIDPGF K KVYNPRI +++L + P+S+AS T PG+C+R
Sbjct: 720 TSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYR 777
Score = 193 (73.0 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 35/52 (67%), Positives = 46/52 (88%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+V+TNIAETSLT+DG++FVIDPGF K KVYNPRI +++L + P+S+ASA QR
Sbjct: 712 IVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQR 763
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 441 (160.3 bits), Expect = 2.2e-40, P = 2.2e-40
Identities = 86/178 (48%), Positives = 123/178 (69%)
Query: 18 NAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEA 77
N P +PGRT PVE+F+ P DY++AA++ V IH+ ++GD+L+F+ GQE+IE
Sbjct: 608 NCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHL-GGMDGDILIFMPGQEDIECT 666
Query: 78 CKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAE 137
C+ IK+++ L EA L +P+YS LP +LQ +IF+ AP GG+ RK +V+TNIAE
Sbjct: 667 CEMIKEKLGELD-EAPPLAVLPIYSQLPSDLQAKIFQRAP-----GGM-RKAIVATNIAE 719
Query: 138 TSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
TSLT+DG++FVIDPGF K KVYNPRI +++L + P+S+AS T PG+C+R
Sbjct: 720 TSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYR 777
Score = 193 (73.0 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 35/52 (67%), Positives = 46/52 (88%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+V+TNIAETSLT+DG++FVIDPGF K KVYNPRI +++L + P+S+ASA QR
Sbjct: 712 IVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQR 763
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 440 (159.9 bits), Expect = 2.4e-40, P = 2.4e-40
Identities = 90/181 (49%), Positives = 120/181 (66%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
YFD AP+ VPGR +PV+I+YTP+PE +Y++AAI T++QIH + GD+L+FLTGQ+EI
Sbjct: 582 YFDEAPVFYVPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPA-GDILVFLTGQDEI 640
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E + +++ LG E+ P+Y+ LP LQ +IF+ P P RKVV++TN
Sbjct: 641 ELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTP---PGA---RKVVLATN 694
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETS+TIDGV FVID GF KQ +YNPR +ESL+ P S+AS PGKCF
Sbjct: 695 IAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCF 754
Query: 195 R 195
R
Sbjct: 755 R 755
Score = 181 (68.8 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 44/89 (49%), Positives = 56/89 (62%)
Query: 164 RVESLLVSPI-SKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGF 222
R+ +++ PI + T PG R VV++TNIAETS+TIDGV FVID GF
Sbjct: 657 RIPEIILCPIYANLPSELQAKIFDPTPPGA--RK-VVLATNIAETSITIDGVNFVIDSGF 713
Query: 223 AKQKVYNPRIRVESLLVSPISKASAQQRA 251
KQ +YNPR +ESL+ P S+ASA QRA
Sbjct: 714 VKQNMYNPRTGMESLVSVPCSRASADQRA 742
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 437 (158.9 bits), Expect = 4.5e-40, P = 4.5e-40
Identities = 88/181 (48%), Positives = 122/181 (67%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+FD+AP+ +PGR PV+I+YT PE DY++AAI T++QIH+ + + GD+L+FLTGQEEI
Sbjct: 528 FFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEI 587
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E + + + LG + EL +P+Y+ LP +LQ +IFE P + RKVV++TN
Sbjct: 588 ETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKD------ARKVVLATN 641
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETS+TIDG+ +VIDPGF+KQ ++ R VE L V ISKA+ T PGKCF
Sbjct: 642 IAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCF 701
Query: 195 R 195
R
Sbjct: 702 R 702
Score = 160 (61.4 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 34/54 (62%), Positives = 43/54 (79%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV++TNIAETS+TIDG+ +VIDPGF+KQ ++ R VE L V ISKA+A QRA
Sbjct: 636 VVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRA 689
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 437 (158.9 bits), Expect = 4.5e-40, P = 4.5e-40
Identities = 88/181 (48%), Positives = 122/181 (67%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+FD+AP+ +PGR PV+I+YT PE DY++AAI T++QIH+ + + GD+L+FLTGQEEI
Sbjct: 528 FFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEI 587
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E + + + LG + EL +P+Y+ LP +LQ +IFE P + RKVV++TN
Sbjct: 588 ETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKD------ARKVVLATN 641
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETS+TIDG+ +VIDPGF+KQ ++ R VE L V ISKA+ T PGKCF
Sbjct: 642 IAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCF 701
Query: 195 R 195
R
Sbjct: 702 R 702
Score = 160 (61.4 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 34/54 (62%), Positives = 43/54 (79%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV++TNIAETS+TIDG+ +VIDPGF+KQ ++ R VE L V ISKA+A QRA
Sbjct: 636 VVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRA 689
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 427 (155.4 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 86/191 (45%), Positives = 117/191 (61%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT ++FDN P+ NVPGR +PV+I YT +PE +Y+ AAI T+ QIH + + GD+
Sbjct: 379 ATMNAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDI 438
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGG 124
L+FLTGQEEIE ++++ + LG ++ P+Y+ LP Q +IF+ P N
Sbjct: 439 LVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENC---- 494
Query: 125 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXX 184
RKVV++TNIAETSLTIDG+ +VIDPGF K+ Y P + LL P S+AS
Sbjct: 495 --RKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGR 552
Query: 185 XXXTRPGKCFR 195
PGKCFR
Sbjct: 553 AGRVGPGKCFR 563
Score = 163 (62.4 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 37/88 (42%), Positives = 50/88 (56%)
Query: 164 RVESLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFA 223
R + ++++PI P C + VV++TNIAETSLTIDG+ +VIDPGF
Sbjct: 465 RTKQMIITPIYANLPQEQQLKIFQPTPENCRK--VVLATNIAETSLTIDGIRYVIDPGFV 522
Query: 224 KQKVYNPRIRVESLLVSPISKASAQQRA 251
K+ Y P + LL P S+AS QRA
Sbjct: 523 KENSYVPSTGMTQLLTVPCSRASVDQRA 550
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 414 (150.8 bits), Expect = 6.1e-38, P = 6.1e-38
Identities = 80/181 (44%), Positives = 122/181 (67%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+F N P+ ++PGRT PV+I ++ P+ DY+EAA++ +Q+H+ GD+L+F+ GQE+I
Sbjct: 234 FFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHL-SGAPGDILIFMPGQEDI 292
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E +I + ++ L A L +P+YS LP +LQ +IF+ AP G+ RK +V+TN
Sbjct: 293 EVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAP-----DGV-RKCIVATN 345
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLT+DG++FVID G+ K KV+NPRI +++L + PIS+A+ T PG+CF
Sbjct: 346 IAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCF 405
Query: 195 R 195
R
Sbjct: 406 R 406
Score = 175 (66.7 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 32/53 (60%), Positives = 46/53 (86%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+V+TNIAETSLT+DG++FVID G+ K KV+NPRI +++L + PIS+A+A QR+
Sbjct: 341 IVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRS 393
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 414 (150.8 bits), Expect = 2.0e-37, P = 2.0e-37
Identities = 80/181 (44%), Positives = 122/181 (67%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+F N P+ ++PGRT PV+I ++ P+ DY+EAA++ +Q+H+ GD+L+F+ GQE+I
Sbjct: 694 FFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHL-SGAPGDILIFMPGQEDI 752
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E +I + ++ L A L +P+YS LP +LQ +IF+ AP G+ RK +V+TN
Sbjct: 753 EVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAP-----DGV-RKCIVATN 805
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLT+DG++FVID G+ K KV+NPRI +++L + PIS+A+ T PG+CF
Sbjct: 806 IAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCF 865
Query: 195 R 195
R
Sbjct: 866 R 866
Score = 175 (66.7 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 32/53 (60%), Positives = 46/53 (86%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+V+TNIAETSLT+DG++FVID G+ K KV+NPRI +++L + PIS+A+A QR+
Sbjct: 801 IVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRS 853
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 414 (150.8 bits), Expect = 2.0e-37, P = 2.0e-37
Identities = 80/181 (44%), Positives = 122/181 (67%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+F N P+ ++PGRT PV+I ++ P+ DY+EAA++ +Q+H+ GD+L+F+ GQE+I
Sbjct: 695 FFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHL-SGAPGDILIFMPGQEDI 753
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E +I + ++ L A L +P+YS LP +LQ +IF+ AP G+ RK +V+TN
Sbjct: 754 EVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAP-----DGV-RKCIVATN 806
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLT+DG++FVID G+ K KV+NPRI +++L + PIS+A+ T PG+CF
Sbjct: 807 IAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCF 866
Query: 195 R 195
R
Sbjct: 867 R 867
Score = 175 (66.7 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 32/53 (60%), Positives = 46/53 (86%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+V+TNIAETSLT+DG++FVID G+ K KV+NPRI +++L + PIS+A+A QR+
Sbjct: 802 IVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRS 854
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 414 (150.8 bits), Expect = 2.0e-37, P = 2.0e-37
Identities = 80/181 (44%), Positives = 122/181 (67%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+F N P+ ++PGRT PV+I ++ P+ DY+EAA++ +Q+H+ GD+L+F+ GQE+I
Sbjct: 695 FFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHL-SGAPGDILIFMPGQEDI 753
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E +I + ++ L A L +P+YS LP +LQ +IF+ AP G+ RK +V+TN
Sbjct: 754 EVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAP-----DGV-RKCIVATN 806
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLT+DG++FVID G+ K KV+NPRI +++L + PIS+A+ T PG+CF
Sbjct: 807 IAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCF 866
Query: 195 R 195
R
Sbjct: 867 R 867
Score = 175 (66.7 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 32/53 (60%), Positives = 46/53 (86%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+V+TNIAETSLT+DG++FVID G+ K KV+NPRI +++L + PIS+A+A QR+
Sbjct: 802 IVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRS 854
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 414 (150.8 bits), Expect = 2.0e-37, P = 2.0e-37
Identities = 80/181 (44%), Positives = 122/181 (67%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+F N P+ ++PGRT PV+I ++ P+ DY+EAA++ +Q+H+ GD+L+F+ GQE+I
Sbjct: 696 FFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHL-SGAPGDILIFMPGQEDI 754
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E +I + ++ L A L +P+YS LP +LQ +IF+ AP G+ RK +V+TN
Sbjct: 755 EVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAP-----DGV-RKCIVATN 807
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLT+DG++FVID G+ K KV+NPRI +++L + PIS+A+ T PG+CF
Sbjct: 808 IAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCF 867
Query: 195 R 195
R
Sbjct: 868 R 868
Score = 175 (66.7 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 32/53 (60%), Positives = 46/53 (86%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+V+TNIAETSLT+DG++FVID G+ K KV+NPRI +++L + PIS+A+A QR+
Sbjct: 803 IVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRS 855
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 414 (150.8 bits), Expect = 2.2e-37, P = 2.2e-37
Identities = 89/185 (48%), Positives = 125/185 (67%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
YF N+P+ +PG+ PVEI ++ EPE DY+EA++ TV+ IH+ E GD+L+FLTGQ+EI
Sbjct: 794 YFFNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVLNIHLNEH-PGDILVFLTGQDEI 852
Query: 75 EEACK----RIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVV 130
AC+ R+KK ++++ P L +P+YS+LP +Q IFE AP P G RK +
Sbjct: 853 NTACEILHERMKK-LESMSPPP--LIILPIYSSLPSEMQSVIFEPAP---P--GC-RKCI 903
Query: 131 VSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRP 190
++TNIAE SLTIDG+ FVIDPGF K K Y+ + ++SL+V+PISKA+ T P
Sbjct: 904 LATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTGP 963
Query: 191 GKCFR 195
GKC+R
Sbjct: 964 GKCYR 968
Score = 173 (66.0 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 39/84 (46%), Positives = 54/84 (64%)
Query: 168 LLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKV 227
L++ PI + P C + I+ +TNIAE SLTIDG+ FVIDPGF K K
Sbjct: 874 LIILPIYSSLPSEMQSVIFEPAPPGCRKCIL--ATNIAEASLTIDGIFFVIDPGFCKIKK 931
Query: 228 YNPRIRVESLLVSPISKASAQQRA 251
Y+ + ++SL+V+PISKA+A+QRA
Sbjct: 932 YDSKRDMDSLIVAPISKANAKQRA 955
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 414 (150.8 bits), Expect = 2.2e-37, P = 2.2e-37
Identities = 89/185 (48%), Positives = 125/185 (67%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
YF N+P+ +PG+ PVEI ++ EPE DY+EA++ TV+ IH+ E GD+L+FLTGQ+EI
Sbjct: 794 YFFNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVLNIHLNEH-PGDILVFLTGQDEI 852
Query: 75 EEACK----RIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVV 130
AC+ R+KK ++++ P L +P+YS+LP +Q IFE AP P G RK +
Sbjct: 853 NTACEILHERMKK-LESMSPPP--LIILPIYSSLPSEMQSVIFEPAP---P--GC-RKCI 903
Query: 131 VSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRP 190
++TNIAE SLTIDG+ FVIDPGF K K Y+ + ++SL+V+PISKA+ T P
Sbjct: 904 LATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTGP 963
Query: 191 GKCFR 195
GKC+R
Sbjct: 964 GKCYR 968
Score = 173 (66.0 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 39/84 (46%), Positives = 54/84 (64%)
Query: 168 LLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKV 227
L++ PI + P C + I+ +TNIAE SLTIDG+ FVIDPGF K K
Sbjct: 874 LIILPIYSSLPSEMQSVIFEPAPPGCRKCIL--ATNIAEASLTIDGIFFVIDPGFCKIKK 931
Query: 228 YNPRIRVESLLVSPISKASAQQRA 251
Y+ + ++SL+V+PISKA+A+QRA
Sbjct: 932 YDSKRDMDSLIVAPISKANAKQRA 955
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 413 (150.4 bits), Expect = 2.7e-37, P = 2.7e-37
Identities = 81/181 (44%), Positives = 123/181 (67%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+F N P+ ++PGRT PV+I ++ P+ DY+EAA++ +QIH+ V GD+L+F+ GQE+I
Sbjct: 726 FFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQIHLSGMV-GDILIFMPGQEDI 784
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E +I + + +L A L +P+YS LP +LQ +IF+ AP G+ RK +V+TN
Sbjct: 785 EVTSDQIVERLADL-ENAPALAVLPIYSQLPSDLQAKIFQKAP-----DGV-RKCIVATN 837
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLT+DG++FV+D G+ K KV+NPRI +++L V PIS+A+ T PG+C+
Sbjct: 838 IAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRAGRAGRTGPGQCY 897
Query: 195 R 195
R
Sbjct: 898 R 898
Score = 178 (67.7 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 33/53 (62%), Positives = 46/53 (86%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+V+TNIAETSLT+DG++FV+D G+ K KV+NPRI +++L V PIS+A+A QRA
Sbjct: 833 IVATNIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRA 885
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 391 (142.7 bits), Expect = 6.8e-37, Sum P(2) = 6.8e-37
Identities = 81/201 (40%), Positives = 129/201 (64%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT ++F AP +PGRT PV++ ++ P DY+++A++ V+ IH+ + GD+
Sbjct: 341 ATMNAERFSRFFGGAPEFIIPGRTFPVDVHFSRTPCEDYVDSAVKQVLAIHVSQG-PGDI 399
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFE-AAPANKPNG 123
L+F+TGQE+IE C+ + + + L + +L +P+YS +P Q +IFE AAP
Sbjct: 400 LVFMTGQEDIEATCELVDERLKLLN-DPPKLSILPIYSQMPAEQQAKIFERAAP------ 452
Query: 124 GIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXX 183
G+ RKV+V+TNIAETSLT+DG++FV+D G++K KVYNP++ +++L ++PIS+A+
Sbjct: 453 GV-RKVIVATNIAETSLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPISQANANQRSG 511
Query: 184 XXXXTRPGKCFR-YIVVVSTN 203
T PGK +R Y V N
Sbjct: 512 RAGRTGPGKAYRLYTEVAYKN 532
Score = 180 (68.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 31/54 (57%), Positives = 49/54 (90%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+V+TNIAETSLT+DG++FV+D G++K KVYNP++ +++L ++PIS+A+A QR+
Sbjct: 457 VIVATNIAETSLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPISQANANQRS 510
Score = 42 (19.8 bits), Expect = 6.8e-37, Sum P(2) = 6.8e-37
Identities = 7/26 (26%), Positives = 18/26 (69%)
Query: 225 QKVYNPRIRVESLLVSPISKASAQQR 250
++ +N R+ +ES + + +A+A++R
Sbjct: 822 EQEFNRRMEIESQIAADRERAAAEKR 847
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 404 (147.3 bits), Expect = 1.5e-36, P = 1.5e-36
Identities = 78/191 (40%), Positives = 126/191 (65%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT +F AP +PGRT PV++ ++ P DY++ A++ V+ IH+ GD+
Sbjct: 456 ATMNAKRFSDFFGGAPDFTIPGRTFPVDVMFSRSPVEDYVDQAVQQVLNIHVSMGT-GDI 514
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGG 124
L+F+TGQE+IE C+ +++ +D L + +L +P+YS +P +LQ +IF+ AP P G
Sbjct: 515 LVFMTGQEDIEVTCELVRERLDALN-DPPKLSILPIYSQMPADLQAKIFDRAP---P--G 568
Query: 125 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXX 184
+ RK +V+TNIAETSLT+DG+++V+D G++K KVYNP++ +++L ++PIS+A+
Sbjct: 569 V-RKCIVATNIAETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQANASQRSGR 627
Query: 185 XXXTRPGKCFR 195
T PGK FR
Sbjct: 628 AGRTGPGKAFR 638
Score = 173 (66.0 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 29/53 (54%), Positives = 48/53 (90%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+V+TNIAETSLT+DG+++V+D G++K KVYNP++ +++L ++PIS+A+A QR+
Sbjct: 573 IVATNIAETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQANASQRS 625
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 397 (144.8 bits), Expect = 2.9e-36, P = 2.9e-36
Identities = 90/183 (49%), Positives = 117/183 (63%)
Query: 17 DNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEE 76
D ++ V GRT PV+IFYT P DY++A + TV++IH E+ +GDVL FLTGQEE+E+
Sbjct: 221 DTCGILTVEGRTFPVDIFYTVSPVPDYVKATVETVLKIHETED-DGDVLAFLTGQEEVEK 279
Query: 77 ACKRIKKEIDNLGPEAGELK--CI-PLYSTLPPNLQQRIFEA-APANKPNGGIGRKVVVS 132
++++ L G K C+ P+Y+ LP N Q R+FE AP RKVVV+
Sbjct: 280 VVSLLQEQARTLS-RYGMKKHLCVLPMYAGLPYNEQMRVFERMAPTV-------RKVVVA 331
Query: 133 TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGK 192
TNIAETS+TI+GVVFVID F K + YNPR +ESL+V+PISKAS R GK
Sbjct: 332 TNIAETSITINGVVFVIDCAFVKIRAYNPRTAIESLIVTPISKASACQRAGRAGRNRAGK 391
Query: 193 CFR 195
CFR
Sbjct: 392 CFR 394
Score = 188 (71.2 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 39/54 (72%), Positives = 46/54 (85%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VVV+TNIAETS+TI+GVVFVID F K + YNPR +ESL+V+PISKASA QRA
Sbjct: 328 VVVATNIAETSITINGVVFVIDCAFVKIRAYNPRTAIESLIVTPISKASACQRA 381
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 393 (143.4 bits), Expect = 8.4e-36, P = 8.4e-36
Identities = 80/184 (43%), Positives = 119/184 (64%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEE 73
++F P++NVPG+ +PVEI Y+ E Y+E++++ + IH+ E EGD+L+F+TGQ++
Sbjct: 167 EFFSGCPVLNVPGKLYPVEILYSKERPVSYIESSLKVAIDIHV-REPEGDILIFMTGQDD 225
Query: 74 IEEACKRIKKEIDNLGPEAGELKCI--PLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVV 131
IE+ R+++++ +L E + I PL+ +LPP +Q R+F P PN R+ +V
Sbjct: 226 IEKLVSRLEEKVRSLA-EGSCMDAIIYPLHGSLPPEMQVRVFSPPP---PNC---RRFIV 278
Query: 132 STNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPG 191
STNIAETSLT+DGVV+VID G+ KQ+ YNP + SL V ISK TRPG
Sbjct: 279 STNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPG 338
Query: 192 KCFR 195
KC+R
Sbjct: 339 KCYR 342
Score = 169 (64.5 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 38/62 (61%), Positives = 44/62 (70%)
Query: 190 PGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQ 249
P C R+IV STNIAETSLT+DGVV+VID G+ KQ+ YNP + SL V ISK A Q
Sbjct: 270 PPNCRRFIV--STNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQ 327
Query: 250 RA 251
RA
Sbjct: 328 RA 329
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 398 (145.2 bits), Expect = 9.4e-36, P = 9.4e-36
Identities = 81/191 (42%), Positives = 124/191 (64%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT +F AP +PGRT+PV+I + P DY+EAA+R V+QIH+ + GD+
Sbjct: 645 ATMNSQKFSDFFGGAPQFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPA-GDI 703
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGG 124
L+F+TGQE+IE C+ I ++ L +A L +P+YS +P +LQ +IF++A +P G
Sbjct: 704 LVFMTGQEDIEATCEIIADRLNQLH-DAPRLSILPIYSQMPADLQAKIFDSA---EP--G 757
Query: 125 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXX 184
+ RKVVV+TNIAETSLT+ G+ +V+D G+ K K+YN ++ +++L V+PIS+A+
Sbjct: 758 V-RKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGR 816
Query: 185 XXXTRPGKCFR 195
T PG +R
Sbjct: 817 AGRTGPGIAYR 827
Score = 163 (62.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 30/54 (55%), Positives = 45/54 (83%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VVV+TNIAETSLT+ G+ +V+D G+ K K+YN ++ +++L V+PIS+A+A QRA
Sbjct: 761 VVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRA 814
Score = 40 (19.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 2 QIFATRRQHLTRQYFDNAPLMNVPG-RTH-PVEIFYTPEP---ERDYLE 45
Q + + HL R ++ N+ N+ G H P F T E E +++E
Sbjct: 276 QRWEEEQAHLDRDWYMNSESQNLLGDEVHNPFSDFETVEDRAHEAEFIE 324
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 74/163 (45%), Positives = 115/163 (70%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+F N P+ ++PGRT PV+I ++ P+ DY+EAA++ +Q+H+ GD+L+F+ GQE+I
Sbjct: 105 FFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHL-SGAPGDILIFMPGQEDI 163
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E +I + ++ L A L +P+YS LP +LQ +IF+ AP G+ RK +V+TN
Sbjct: 164 EVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAP-----DGV-RKCIVATN 216
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKAS 177
IAETSLT+DG++FVID G+ K KV+NPRI +++L + PIS+A+
Sbjct: 217 IAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQAN 259
Score = 175 (66.7 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 32/53 (60%), Positives = 46/53 (86%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+V+TNIAETSLT+DG++FVID G+ K KV+NPRI +++L + PIS+A+A QR+
Sbjct: 212 IVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRS 264
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 216 (81.1 bits), Expect = 2.9e-35, Sum P(2) = 2.9e-35
Identities = 42/100 (42%), Positives = 67/100 (67%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
YF+ AP+ VPGR + V+I+YT E +Y+ A + T++QIH+ + +GD+L+FL GQ EI
Sbjct: 601 YFNCAPIFYVPGRKYNVDIYYTINNESNYISAIVITILQIHITQG-KGDILVFLPGQYEI 659
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFE 114
E + ++ +++ L P+ L +P+YS+LP Q RIFE
Sbjct: 660 ELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFE 699
Score = 208 (78.3 bits), Expect = 2.9e-35, Sum P(2) = 2.9e-35
Identities = 45/104 (43%), Positives = 61/104 (58%)
Query: 107 NLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 166
N+ + I E N N I RK+++STNI ETS+TID +V+VID G KQK+YNP +E
Sbjct: 784 NINEEIEELKRINT-NNKIRRKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIE 842
Query: 167 SLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVS-TNIAETSL 209
SL+ P SKAS R GKCFR S ++++ S+
Sbjct: 843 SLVTLPCSKASVNQRTGRAGRKRDGKCFRLFTKKSFIDLSDNSI 886
Score = 168 (64.2 bits), Expect = 4.5e-31, Sum P(2) = 4.5e-31
Identities = 31/53 (58%), Positives = 40/53 (75%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+++STNI ETS+TID +V+VID G KQK+YNP +ESL+ P SKAS QR
Sbjct: 805 IILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQR 857
Score = 45 (20.9 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 12/53 (22%), Positives = 25/53 (47%)
Query: 118 ANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 170
A + N IG++V + ++++ D F + +YNP + S+L+
Sbjct: 504 AEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLEDISVLI 556
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 216 (81.1 bits), Expect = 2.9e-35, Sum P(2) = 2.9e-35
Identities = 42/100 (42%), Positives = 67/100 (67%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
YF+ AP+ VPGR + V+I+YT E +Y+ A + T++QIH+ + +GD+L+FL GQ EI
Sbjct: 601 YFNCAPIFYVPGRKYNVDIYYTINNESNYISAIVITILQIHITQG-KGDILVFLPGQYEI 659
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFE 114
E + ++ +++ L P+ L +P+YS+LP Q RIFE
Sbjct: 660 ELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFE 699
Score = 208 (78.3 bits), Expect = 2.9e-35, Sum P(2) = 2.9e-35
Identities = 45/104 (43%), Positives = 61/104 (58%)
Query: 107 NLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 166
N+ + I E N N I RK+++STNI ETS+TID +V+VID G KQK+YNP +E
Sbjct: 784 NINEEIEELKRINT-NNKIRRKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIE 842
Query: 167 SLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVS-TNIAETSL 209
SL+ P SKAS R GKCFR S ++++ S+
Sbjct: 843 SLVTLPCSKASVNQRTGRAGRKRDGKCFRLFTKKSFIDLSDNSI 886
Score = 168 (64.2 bits), Expect = 4.5e-31, Sum P(2) = 4.5e-31
Identities = 31/53 (58%), Positives = 40/53 (75%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+++STNI ETS+TID +V+VID G KQK+YNP +ESL+ P SKAS QR
Sbjct: 805 IILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQR 857
Score = 45 (20.9 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 12/53 (22%), Positives = 25/53 (47%)
Query: 118 ANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 170
A + N IG++V + ++++ D F + +YNP + S+L+
Sbjct: 504 AEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLEDISVLI 556
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 388 (141.6 bits), Expect = 3.5e-35, P = 3.5e-35
Identities = 86/202 (42%), Positives = 124/202 (61%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMC------- 57
AT L QYF+NAP++ + GR PV+I+YT E ++DY++AA+ TV+QIH+
Sbjct: 229 ATLDAELFSQYFNNAPVLYIEGRQFPVQIYYTEEIQKDYVDAALITVLQIHIAHLTDKSI 288
Query: 58 --EEVE--GDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIF 113
EE E GD+L+FLTG++EIE K + I L + +L P++S LP Q ++F
Sbjct: 289 NKEEEEDGGDILVFLTGRDEIENLEKLLLDRIPRLPVGSKDLIVCPIFSALPQEQQMKVF 348
Query: 114 EAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPI 173
E AP RKV+++TNIAETSLTI+G+ +V+D G K K++NP+I ++SL + PI
Sbjct: 349 EKAPKGS------RKVILATNIAETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNIIPI 402
Query: 174 SKASXXXXXXXXXXTRPGKCFR 195
SKAS GKC+R
Sbjct: 403 SKASAKQRTGRAGREFEGKCYR 424
Score = 174 (66.3 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 43/92 (46%), Positives = 59/92 (64%)
Query: 161 PRIRVES--LLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVI 218
PR+ V S L+V PI A P K R V+++TNIAETSLTI+G+ +V+
Sbjct: 321 PRLPVGSKDLIVCPIFSALPQEQQMKVFEKAP-KGSRK-VILATNIAETSLTINGIRYVV 378
Query: 219 DPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
D G K K++NP+I ++SL + PISKASA+QR
Sbjct: 379 DSGAVKSKIFNPKIGIDSLNIIPISKASAKQR 410
Score = 36 (17.7 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 83 KEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAP 117
K I + LK I + +TL L + F AP
Sbjct: 210 KSIQKRREKKNPLKIIIMSATLDAELFSQYFNNAP 244
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 384 (140.2 bits), Expect = 6.8e-35, P = 6.8e-35
Identities = 79/190 (41%), Positives = 118/190 (62%)
Query: 21 LMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKR 80
++++ GRT+P++I Y P DYL+ A+ TV+ +H E +GD+L+FLTG++EIE A
Sbjct: 207 IVSLEGRTYPIDILYLESPAEDYLQRAVSTVLDVHE-NEPDGDILVFLTGRDEIEAAVDA 265
Query: 81 IKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSL 140
+ + +L + L +PL+S L Q IFE APAN RKV+ STNIAE S+
Sbjct: 266 VSERTAHLTSQDRGLLPLPLFSGLSTEQQMYIFEEAPANT------RKVIFSTNIAEASV 319
Query: 141 TIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVV 200
TI G+V+V+D GF K + YNP+ +E+L PISKA+ T+PGKCFR
Sbjct: 320 TISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKAAAAQRAGRAGRTKPGKCFRLYTEE 379
Query: 201 S-TNIAETSL 209
S T++++T++
Sbjct: 380 SYTSLSDTNI 389
Score = 164 (62.8 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+ STNIAE S+TI G+V+V+D GF K + YNP+ +E+L PISKA+A QRA
Sbjct: 308 VIFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKAAAAQRA 361
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 390 (142.3 bits), Expect = 7.2e-35, P = 7.2e-35
Identities = 79/184 (42%), Positives = 121/184 (65%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+F N P +PGRT PV++ ++ DY+E+A++ +Q+H+ EGD+L+F+ GQE+I
Sbjct: 697 FFGNVPTFTIPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPN-EGDMLIFMPGQEDI 755
Query: 75 EEACKRIKK---EIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVV 131
E C+ +++ EIDN A L +P+YS LP +LQ +IF+ K + G+ RK VV
Sbjct: 756 EVTCEVLEERLAEIDN----APALSILPIYSQLPSDLQAKIFQ-----KSSDGL-RKCVV 805
Query: 132 STNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPG 191
+TNIAETSLT+DG+++VID G+ K KVYNPRI +++L + PIS+A+ T PG
Sbjct: 806 ATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPG 865
Query: 192 KCFR 195
+ +R
Sbjct: 866 QAYR 869
Score = 179 (68.1 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 33/53 (62%), Positives = 46/53 (86%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV+TNIAETSLT+DG+++VID G+ K KVYNPRI +++L + PIS+A+A QR+
Sbjct: 804 VVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRS 856
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 379 (138.5 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 79/182 (43%), Positives = 112/182 (61%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEE 73
QYF+ AP++ + GR HP+++FYT +P+ DYL+AA+ +V QIH D+L+FLTGQEE
Sbjct: 191 QYFNGAPVLYLEGRQHPIQVFYTKQPQSDYLQAALVSVFQIHQEAPSSQDILVFLTGQEE 250
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVST 133
IE K + +L ++ +PLY++LP + Q R+F+AAP G RKV++ST
Sbjct: 251 IEAMTKTCRDIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQAAPK-----GC-RKVILST 304
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
NIAETS+TI G+ +V+D G K K YNP I +E L V +SKA G C
Sbjct: 305 NIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQRTGRAGREDSGIC 364
Query: 194 FR 195
+R
Sbjct: 365 YR 366
Score = 150 (57.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 30/53 (56%), Positives = 38/53 (71%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
V++STNIAETS+TI G+ +V+D G K K YNP I +E L V +SKA A QR
Sbjct: 300 VILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQR 352
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 361 (132.1 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 78/191 (40%), Positives = 108/191 (56%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT L QYF+ AP++ + GR HP+++FYT +P+ DYL AA+ +V QIH D+
Sbjct: 142 ATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDI 201
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGG 124
L+FLTGQEEIE K + +L + +PLY++LP Q R+F+ AP
Sbjct: 202 LVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGY---- 257
Query: 125 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXX 184
RKV++STNIAETS+TI G+ +V+D G K K YNP +E L V +SK
Sbjct: 258 --RKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGR 315
Query: 185 XXXTRPGKCFR 195
G C+R
Sbjct: 316 AGREDSGICYR 326
Score = 139 (54.0 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 28/53 (52%), Positives = 36/53 (67%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
V++STNIAETS+TI G+ +V+D G K K YNP +E L V +SK A QR
Sbjct: 260 VIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 312
Score = 40 (19.1 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAP 117
+ +A ++ +KE+ L P LK I + +T+ +L + F AP
Sbjct: 119 VVKAAQKRRKELGKL-P----LKVIVMSATMDVDLFSQYFNGAP 157
Score = 38 (18.4 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 216 FVIDPGFAKQKVYNPRIRVESLLVSPISKAS 246
F ++P FAK + +P+ +++ +S S
Sbjct: 410 FPLEPKFAKTILMSPKFHCTEEILTIVSLLS 440
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 380 (138.8 bits), Expect = 6.6e-34, P = 6.6e-34
Identities = 78/191 (40%), Positives = 119/191 (62%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVE-GDVLLFLTGQEE 73
+F NAP +PGRT PV+ YT P +DY+EAA+ V+IH+ + GD+L+F+TGQE+
Sbjct: 516 FFGNAPQFTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQED 575
Query: 74 IEEACKRIKKEI-----DNLGP----EAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGG 124
IE ++++ G E +++ +P+YS LP +LQ +IF+ K
Sbjct: 576 IETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTK---- 631
Query: 125 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXX 184
RK++++TNIAETSLTI G+ +VID G++K KVYNP+I ++SL+++PISKA+
Sbjct: 632 --RKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGR 689
Query: 185 XXXTRPGKCFR 195
T PG +R
Sbjct: 690 AGRTAPGTAYR 700
Score = 177 (67.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 32/54 (59%), Positives = 48/54 (88%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
++++TNIAETSLTI G+ +VID G++K KVYNP+I ++SL+++PISKA+A QR+
Sbjct: 634 IIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRS 687
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 361 (132.1 bits), Expect = 7.7e-34, Sum P(2) = 7.7e-34
Identities = 78/191 (40%), Positives = 108/191 (56%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT L QYF+ AP++ + GR HP+++FYT +P+ DYL AA+ +V QIH D+
Sbjct: 232 ATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDI 291
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGG 124
L+FLTGQEEIE K + +L + +PLY++LP Q R+F+ AP
Sbjct: 292 LVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGY---- 347
Query: 125 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXX 184
RKV++STNIAETS+TI G+ +V+D G K K YNP +E L V +SK
Sbjct: 348 --RKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGR 405
Query: 185 XXXTRPGKCFR 195
G C+R
Sbjct: 406 AGREDSGICYR 416
Score = 139 (54.0 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 28/53 (52%), Positives = 36/53 (67%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
V++STNIAETS+TI G+ +V+D G K K YNP +E L V +SK A QR
Sbjct: 350 VIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 402
Score = 40 (19.1 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAP 117
+ +A ++ +KE+ L P LK I + +T+ +L + F AP
Sbjct: 209 VVKAAQKRRKELGKL-P----LKVIVMSATMDVDLFSQYFNGAP 247
Score = 38 (18.4 bits), Expect = 7.7e-34, Sum P(2) = 7.7e-34
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 216 FVIDPGFAKQKVYNPRIRVESLLVSPISKAS 246
F ++P FAK + +P+ +++ +S S
Sbjct: 500 FPLEPKFAKTILMSPKFHCTEEILTIVSLLS 530
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 362 (132.5 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
Identities = 79/191 (41%), Positives = 108/191 (56%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT L QYF+ AP++ + GR HP++IFYT +P+ DYL AA+ +V QIH D+
Sbjct: 239 ATMDVDLFSQYFNGAPVLYLEGRQHPIQIFYTKQPQHDYLHAALVSVFQIHQEAPSSHDI 298
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGG 124
L+FLTGQEEIE K + +L + +PLY++LP Q R+F+ AP
Sbjct: 299 LVFLTGQEEIEAMSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQRAPKGY---- 354
Query: 125 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXX 184
RKV++STNIAETS+TI G+ +V+D G K K YNP +E L V +SK
Sbjct: 355 --RKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGR 412
Query: 185 XXXTRPGKCFR 195
G C+R
Sbjct: 413 AGREDSGICYR 423
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 37/84 (44%), Positives = 48/84 (57%)
Query: 167 SLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQK 226
S+LV P+ AS R K +R V++STNIAETS+TI G+ +V+D G K K
Sbjct: 328 SMLVLPLY-ASLPYAQQLRVFQRAPKGYRK-VIISTNIAETSITITGIKYVVDTGMVKAK 385
Query: 227 VYNPRIRVESLLVSPISKASAQQR 250
YNP +E L V +SK A QR
Sbjct: 386 KYNPDSGLEVLAVQRVSKTQAWQR 409
Score = 36 (17.7 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 216 FVIDPGFAKQKVYNPRIR-VESLL 238
F ++P FAK + +P+ E +L
Sbjct: 507 FPLEPKFAKTILLSPKFHCTEEIL 530
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 372 (136.0 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 76/175 (43%), Positives = 112/175 (64%)
Query: 21 LMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKR 80
++++ GR +PV+ + +Y+E +++TV IH+ +E EGD+L+FLTG+EEIE A +
Sbjct: 207 IISIEGRMYPVDTLFLESAAENYVERSVKTVFDIHL-QEGEGDILIFLTGREEIETAIQL 265
Query: 81 IKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSL 140
I + L P++ L +PLY+ L + Q +FE AP N RKVVVSTNIAE S+
Sbjct: 266 ISERATTLHPKSQSLLPLPLYAGLTTDQQMYVFEPAPENT------RKVVVSTNIAEASV 319
Query: 141 TIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
TI+G+V+V+D GFAK + Y+P +E+L PISKA+ T+PGKCFR
Sbjct: 320 TINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAVQRAGRAGRTKPGKCFR 374
Score = 164 (62.8 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 33/54 (61%), Positives = 43/54 (79%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VVVSTNIAE S+TI+G+V+V+D GFAK + Y+P +E+L PISKA+A QRA
Sbjct: 308 VVVSTNIAEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAVQRA 361
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 353 (129.3 bits), Expect = 2.1e-33, Sum P(2) = 2.1e-33
Identities = 77/191 (40%), Positives = 109/191 (57%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT L QYF+ A ++ + GR HP+++FYT +P++DYL AA+ +V QIH D+
Sbjct: 141 ATMDVDLFSQYFNGASVLYLEGRQHPIQVFYTKQPQQDYLHAALVSVFQIHQEAPSSQDI 200
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGG 124
L+FLTGQEEIE K + +L + +PLY++LP Q R+F+ AP G
Sbjct: 201 LVFLTGQEEIEAVSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQGAPK-----G 255
Query: 125 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXX 184
RKV+++TNIAETS+TI G+ +V+D G K K YNP +E L V +SK
Sbjct: 256 C-RKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRAGR 314
Query: 185 XXXTRPGKCFR 195
G C+R
Sbjct: 315 AGREDSGICYR 325
Score = 144 (55.7 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 34/85 (40%), Positives = 47/85 (55%)
Query: 167 SLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQK 226
S+LV P+ + P C + V+++TNIAETS+TI G+ +V+D G K K
Sbjct: 230 SMLVLPLYASLPYAQQLRVFQGAPKGCRK--VIIATNIAETSITITGIKYVVDTGMVKAK 287
Query: 227 VYNPRIRVESLLVSPISKASAQQRA 251
YNP +E L V +SK A QRA
Sbjct: 288 KYNPDSGLEVLAVQRVSKTQAWQRA 312
Score = 38 (18.4 bits), Expect = 2.1e-33, Sum P(2) = 2.1e-33
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 216 FVIDPGFAKQKVYNPRIRVESLLVSPISKAS 246
F ++P FAK + +P+ +++ +S S
Sbjct: 409 FPLEPKFAKTILLSPKFHCTEEILTIVSLLS 439
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 370 (135.3 bits), Expect = 2.9e-33, P = 2.9e-33
Identities = 80/182 (43%), Positives = 113/182 (62%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEE 73
+YF A ++V GR PV+I YT PE DY++A + T+ QIH EE GD+L+FLTGQ+E
Sbjct: 245 EYFGGAKAVHVQGRQFPVDILYTVHPESDYVDATLVTIFQIHF-EEKPGDILVFLTGQDE 303
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVST 133
IE + +++ + N+ + +L + ++S LP Q ++F APA P G RKV+++T
Sbjct: 304 IESVERLVQERLQNIPEDKRKLLPLAIFSALPSEQQMKVF--APA--PTGF--RKVILAT 357
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
NIAETS+TI G+ +VIDPGF K + Y+P +ESL V P SKA PGK
Sbjct: 358 NIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQRSGRAGREGPGKS 417
Query: 194 FR 195
FR
Sbjct: 418 FR 419
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 30/54 (55%), Positives = 40/54 (74%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+++TNIAETS+TI G+ +VIDPGF K + Y+P +ESL V P SKA QR+
Sbjct: 353 VILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQRS 406
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 368 (134.6 bits), Expect = 4.4e-33, P = 4.4e-33
Identities = 79/191 (41%), Positives = 110/191 (57%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT L QYF+ AP++ + GR HP++IFYT +P++DYL AA+ +V QIH D+
Sbjct: 223 ATMDVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQDI 282
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGG 124
L+FLTGQEEIE K + +L + +PLY++LP + Q R+F+ AP
Sbjct: 283 LVFLTGQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGY---- 338
Query: 125 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXX 184
RKV++STNIAETS+TI G+ +V+D G K K YNP +E L V +SK
Sbjct: 339 --RKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGR 396
Query: 185 XXXTRPGKCFR 195
G C+R
Sbjct: 397 AGREDSGICYR 407
Score = 140 (54.3 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 35/84 (41%), Positives = 47/84 (55%)
Query: 167 SLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQK 226
S+LV P+ + P K +R V++STNIAETS+TI G+ +V+D G K K
Sbjct: 312 SMLVLPLYASLPYSQQLRVFQGAP-KGYRK-VIISTNIAETSITITGIKYVVDTGMVKAK 369
Query: 227 VYNPRIRVESLLVSPISKASAQQR 250
YNP +E L V +SK A QR
Sbjct: 370 KYNPDSGLEVLAVQRVSKTQAWQR 393
Score = 38 (18.4 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 74 IEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAP 117
++ A KR +KE+ L P LK I + +T+ +L + F AP
Sbjct: 201 VKTAQKR-RKELGKL-P----LKVIVMSATMDVDLFSQYFNRAP 238
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 367 (134.2 bits), Expect = 5.7e-33, P = 5.7e-33
Identities = 75/181 (41%), Positives = 112/181 (61%)
Query: 17 DNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEE 76
D ++ V GRT PV+IFY P DY+++ + TV++IH E +GD+L FLTGQEE+E
Sbjct: 223 DTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEG-DGDILAFLTGQEEVET 281
Query: 77 ACKRIKKEIDNLGPEAGE--LKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
+ ++ LG + L+ +P+Y+ LP Q ++FE + RKV+V+TN
Sbjct: 282 VVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSV------RKVIVATN 335
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
+AETS+TI G+V+VID GF K + YNPR +E L+V+P+S+AS +R GKC+
Sbjct: 336 VAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGRSRSGKCY 395
Query: 195 R 195
R
Sbjct: 396 R 396
Score = 180 (68.4 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 33/54 (61%), Positives = 45/54 (83%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+V+TN+AETS+TI G+V+VID GF K + YNPR +E L+V+P+S+ASA QRA
Sbjct: 330 VIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRA 383
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 367 (134.2 bits), Expect = 5.8e-33, P = 5.8e-33
Identities = 75/181 (41%), Positives = 112/181 (61%)
Query: 17 DNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEE 76
D ++ V GRT PV+IFY P DY+++ + TV++IH E +GD+L FLTGQEE+E
Sbjct: 231 DTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEG-DGDILAFLTGQEEVET 289
Query: 77 ACKRIKKEIDNLGPEAGE--LKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
+ ++ LG + L+ +P+Y+ LP Q ++FE + RKV+V+TN
Sbjct: 290 VVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSV------RKVIVATN 343
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
+AETS+TI G+V+VID GF K + YNPR +E L+V+P+S+AS +R GKC+
Sbjct: 344 VAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGRSRSGKCY 403
Query: 195 R 195
R
Sbjct: 404 R 404
Score = 180 (68.4 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 33/54 (61%), Positives = 45/54 (83%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+V+TN+AETS+TI G+V+VID GF K + YNPR +E L+V+P+S+ASA QRA
Sbjct: 338 VIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRA 391
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 365 (133.5 bits), Expect = 9.7e-33, P = 9.7e-33
Identities = 76/182 (41%), Positives = 112/182 (61%)
Query: 17 DNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEE 76
D ++ V GRT PV+IFY P DY+++ + TV++IH E +GD+L FLTGQEE+E
Sbjct: 231 DTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEG-DGDILAFLTGQEEVET 289
Query: 77 ACKRIKKEIDNLGPEAG---ELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVST 133
+ ++ LG + G L+ +P+Y+ LP Q ++FE + RKV+V+T
Sbjct: 290 VVSMLIEQARALG-QTGMKRHLRILPMYAGLPSFEQMKVFERVSRSV------RKVIVAT 342
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
N+AETS+TI G+V+VID GF K + YNPR +E L+V P+S+AS +R GKC
Sbjct: 343 NVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKC 402
Query: 194 FR 195
+R
Sbjct: 403 YR 404
Score = 177 (67.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+V+TN+AETS+TI G+V+VID GF K + YNPR +E L+V P+S+ASA QRA
Sbjct: 338 VIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRA 391
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 364 (133.2 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 75/181 (41%), Positives = 111/181 (61%)
Query: 17 DNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEE 76
D ++ V GRT PV+IFY P DY+++ + TV++IH E +GD+L FLTGQEE+E
Sbjct: 231 DTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEG-DGDILAFLTGQEEVET 289
Query: 77 ACKRIKKEIDNLGPEAGE--LKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
+ ++ LG + L+ +P+Y+ LP Q ++FE + RKV+V+TN
Sbjct: 290 VVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSV------RKVIVATN 343
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
+AETS+TI G+V+VID GF K + YNPR +E L+V P+S+AS +R GKC+
Sbjct: 344 VAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRAGRSRSGKCY 403
Query: 195 R 195
R
Sbjct: 404 R 404
Score = 177 (67.4 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+V+TN+AETS+TI G+V+VID GF K + YNPR +E L+V P+S+ASA QRA
Sbjct: 338 VIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRA 391
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 366 (133.9 bits), Expect = 2.1e-32, P = 2.1e-32
Identities = 91/246 (36%), Positives = 140/246 (56%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCE------ 58
AT + ++F AP ++PGRT PVE+F+ + DY+E A++ V+ IH+
Sbjct: 519 ATMNANRFTKFFGVAPQFHIPGRTFPVEVFFNRDVNMDYVEMAVKQVLTIHLGRWNADNN 578
Query: 59 -EVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAP 117
+GD+L+F+TGQE+IE C IK+++ NL + L P+YST+P +LQ++IF
Sbjct: 579 NANDGDILVFMTGQEDIEITCDLIKEKL-NLLEDPPPLDIFPIYSTMPQDLQKKIF---- 633
Query: 118 ANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKAS 177
NK N RKVVV+TNIAETSLT+DG+ +VID G K KVYNP++ +++L V PIS A+
Sbjct: 634 -NKTNLQ-RRKVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLAN 691
Query: 178 XXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESL 237
T G +R +T S+ + + P + + N + ++SL
Sbjct: 692 ADQRSGRAGRTGAGIAYRLYTEKATE--PDSMYVQPI-----PEIQRSNLSNIMLLLKSL 744
Query: 238 LVSPIS 243
V+ I+
Sbjct: 745 KVNDIN 750
Score = 166 (63.5 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VVV+TNIAETSLT+DG+ +VID G K KVYNP++ +++L V PIS A+A QR+
Sbjct: 643 VVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLANADQRS 696
Score = 36 (17.7 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 20/86 (23%), Positives = 38/86 (44%)
Query: 38 EPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKR-IKKEI-----DNLGPE 91
E + D + I+ + + + E+ D +L ++EA +R + +I NL +
Sbjct: 449 EDKTDNKKTVIKYMTEGILLREILADPMLANYSCIIMDEAHERSLNTDILLGLFKNLLAK 508
Query: 92 AGELKCIPLYSTLPPNLQQRIFEAAP 117
+LK I +T+ N + F AP
Sbjct: 509 RKDLKLIVTSATMNANRFTKFFGVAP 534
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 361 (132.1 bits), Expect = 2.2e-32, P = 2.2e-32
Identities = 76/181 (41%), Positives = 110/181 (60%)
Query: 17 DNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEE 76
D ++ V GRT PV+IFY P DY+++ + TVV+IH E +GDVL FLTGQEE+E
Sbjct: 200 DTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEG-DGDVLAFLTGQEEVET 258
Query: 77 ACKRIKKEIDNLGPEAGE--LKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
+ ++ L + L+ +P+Y+ LP Q ++FE + RKV+V+TN
Sbjct: 259 VVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSV------RKVIVATN 312
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
+AETS+TI G+V+VID GF K + YNPR +E L+V P+S+AS +R GKC+
Sbjct: 313 VAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCY 372
Query: 195 R 195
R
Sbjct: 373 R 373
Score = 177 (67.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+V+TN+AETS+TI G+V+VID GF K + YNPR +E L+V P+S+ASA QRA
Sbjct: 307 VIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRA 360
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 361 (132.1 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 76/181 (41%), Positives = 110/181 (60%)
Query: 17 DNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEE 76
D ++ V GRT PV+IFY P DY+++ + TVV+IH E +GDVL FLTGQEE+E
Sbjct: 231 DTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEG-DGDVLAFLTGQEEVET 289
Query: 77 ACKRIKKEIDNLGPEAGE--LKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
+ ++ L + L+ +P+Y+ LP Q ++FE + RKV+V+TN
Sbjct: 290 VVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSV------RKVIVATN 343
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
+AETS+TI G+V+VID GF K + YNPR +E L+V P+S+AS +R GKC+
Sbjct: 344 VAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCY 403
Query: 195 R 195
R
Sbjct: 404 R 404
Score = 177 (67.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+V+TN+AETS+TI G+V+VID GF K + YNPR +E L+V P+S+ASA QRA
Sbjct: 338 VIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRA 391
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 361 (132.1 bits), Expect = 2.6e-32, P = 2.6e-32
Identities = 76/181 (41%), Positives = 110/181 (60%)
Query: 17 DNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEE 76
D ++ V GRT PV+IFY P DY+++ + TVV+IH E +GDVL FLTGQEE+E
Sbjct: 231 DTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEG-DGDVLAFLTGQEEVET 289
Query: 77 ACKRIKKEIDNLGPEAGE--LKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
+ ++ L + L+ +P+Y+ LP Q ++FE + RKV+V+TN
Sbjct: 290 VVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSV------RKVIVATN 343
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
+AETS+TI G+V+VID GF K + YNPR +E L+V P+S+AS +R GKC+
Sbjct: 344 VAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCY 403
Query: 195 R 195
R
Sbjct: 404 R 404
Score = 177 (67.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+V+TN+AETS+TI G+V+VID GF K + YNPR +E L+V P+S+ASA QRA
Sbjct: 338 VIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRA 391
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 358 (131.1 bits), Expect = 4.9e-32, P = 4.9e-32
Identities = 76/181 (41%), Positives = 109/181 (60%)
Query: 17 DNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEE 76
D ++ V GRT PV+IFY P DY++A + TVV+IH E +GD+L FLTGQEE+E
Sbjct: 231 DTCVILTVEGRTFPVDIFYLQSPVPDYIKATVDTVVKIHQTEG-DGDILAFLTGQEEVET 289
Query: 77 ACKRIKKEIDNLGPEAGE--LKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
+ ++ L + L+ +P+Y+ LP Q ++FE + RKV+V+TN
Sbjct: 290 VVSMLIEQARALARTGMKKHLRVLPMYAGLPSFEQMKVFERVSHSV------RKVIVATN 343
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
+AETS+TI G+V+VID GF K + YNPR +E L+V P+S+AS R GKC+
Sbjct: 344 VAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCY 403
Query: 195 R 195
R
Sbjct: 404 R 404
Score = 176 (67.0 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+V+TN+AETS+TI G+V+VID GF K + YNPR +E L+V P+S+ASA QRA
Sbjct: 338 VIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRA 391
Score = 38 (18.4 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 124 GIGRKVVVSTNIAETSLTIDG-VVFVIDP 151
G G+ V +AE T +G VV V P
Sbjct: 80 GCGKSTQVPQYLAEAGWTAEGRVVGVTQP 108
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 358 (131.1 bits), Expect = 5.6e-32, P = 5.6e-32
Identities = 76/181 (41%), Positives = 109/181 (60%)
Query: 17 DNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEE 76
D ++ V GRT PV+IFY P DY++A + TVV+IH E +GD+L FLTGQEE+E
Sbjct: 231 DTCVILTVEGRTFPVDIFYLQSPVPDYIKATVDTVVKIHQTEG-DGDILAFLTGQEEVET 289
Query: 77 ACKRIKKEIDNLGPEAGE--LKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
+ ++ L + L+ +P+Y+ LP Q ++FE + RKV+V+TN
Sbjct: 290 VVSMLIEQARALARTGMKKHLRVLPMYAGLPSFEQMKVFERVSHSV------RKVIVATN 343
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
+AETS+TI G+V+VID GF K + YNPR +E L+V P+S+AS R GKC+
Sbjct: 344 VAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCY 403
Query: 195 R 195
R
Sbjct: 404 R 404
Score = 176 (67.0 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+V+TN+AETS+TI G+V+VID GF K + YNPR +E L+V P+S+ASA QRA
Sbjct: 338 VIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRA 391
Score = 38 (18.4 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 124 GIGRKVVVSTNIAETSLTIDG-VVFVIDP 151
G G+ V +AE T +G VV V P
Sbjct: 80 GCGKSTQVPQYLAEAGWTAEGRVVGVTQP 108
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 352 (129.0 bits), Expect = 2.5e-31, P = 2.5e-31
Identities = 72/181 (39%), Positives = 107/181 (59%)
Query: 17 DNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEE 76
D + ++ V GRT PV+IFY P DY+++ + T ++IH E +GD+L FLTGQEE+E
Sbjct: 231 DTSVILTVEGRTFPVDIFYIQSPVPDYIKSTVETAMKIHQMEN-DGDILAFLTGQEEVET 289
Query: 77 ACKRIKKEIDNLGPEA--GELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
+ ++ L L+ +P+Y+ LP Q ++FE + RKV+V+TN
Sbjct: 290 VVSMLIEQARALSRTGMRKHLRVLPMYAGLPSPDQMKVFERVSRSV------RKVIVATN 343
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
+AETS+TI G+ +VID GF K + YNP+ +E L+V P+SKAS R GKC+
Sbjct: 344 VAETSITIHGIAYVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCY 403
Query: 195 R 195
R
Sbjct: 404 R 404
Score = 173 (66.0 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 32/54 (59%), Positives = 43/54 (79%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+V+TN+AETS+TI G+ +VID GF K + YNP+ +E L+V P+SKASA QRA
Sbjct: 338 VIVATNVAETSITIHGIAYVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRA 391
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 350 (128.3 bits), Expect = 4.4e-31, P = 4.4e-31
Identities = 78/191 (40%), Positives = 113/191 (59%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT ++FD A + + GR +PV+I YT PE DYL+A +RT+ Q+H + GD+
Sbjct: 249 ATLNAERFSEFFDGAEICYISGRQYPVQIHYTYTPEPDYLDACLRTIFQLHT-KLPPGDI 307
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGG 124
L+FLTGQ+EIE IK L +++ PL+++LP Q ++F A AN
Sbjct: 308 LVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANH---- 363
Query: 125 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXX 184
RKVV+STNIAETS+TI G+ +VID G AK K +N ++ +ESL V PIS+++
Sbjct: 364 --RKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGR 421
Query: 185 XXXTRPGKCFR 195
G+C+R
Sbjct: 422 AGREAAGQCYR 432
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 31/54 (57%), Positives = 43/54 (79%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV+STNIAETS+TI G+ +VID G AK K +N ++ +ESL V PIS+++A QR+
Sbjct: 366 VVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRS 419
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 351 (128.6 bits), Expect = 4.9e-31, P = 4.9e-31
Identities = 68/179 (37%), Positives = 109/179 (60%)
Query: 17 DNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEE 76
D + ++ GR PV+ Y+PEP D+++AA++ + QIH E + GD+L+FLTGQE +E
Sbjct: 358 DGIAVCHIKGRQFPVKTIYSPEPVHDFVDAALKVIFQIHYKEPIPGDILVFLTGQETVEA 417
Query: 77 ACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIA 136
+ + + P +++ +PL++ LP QQR+F AP RK++++TNIA
Sbjct: 418 LENLVNEYATGMDPSLPKIQVLPLFAALPQAAQQRVFVPAPPRT------RKIILATNIA 471
Query: 137 ETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
ETS+T+ GV +V+D G AK K + R+ ++SLLV PISK++ PG+C+R
Sbjct: 472 ETSVTVSGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQRKGRAGREAPGQCYR 530
Score = 141 (54.7 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
++++TNIAETS+T+ GV +V+D G AK K + R+ ++SLLV PISK++A QR
Sbjct: 464 IILATNIAETSVTVSGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQR 516
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 353 (129.3 bits), Expect = 6.5e-31, P = 6.5e-31
Identities = 73/182 (40%), Positives = 110/182 (60%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+F N P+ ++PGRT PV+I ++ P+ DY+EAA++ +Q+H+ GD+L+F+ GQE+I
Sbjct: 695 FFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHL-SGAPGDILIFMPGQEDI 753
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E +I + ++ L A L +P+YS LP +LQ +IF+ AP G+ RK +V+TN
Sbjct: 754 EVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAP-----DGV-RKCIVATN 806
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
IAETSLT+DG++FVID G+ K KV +P + L + I K T P C
Sbjct: 807 IAETSLTVDGIMFVIDSGYCKLKVSSPSLGGSDLKIMEIQKIQKNINTGCSGCTSPRCCR 866
Query: 195 RY 196
Y
Sbjct: 867 LY 868
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISK 244
+V+TNIAETSLT+DG++FVID G+ K KV +P + L + I K
Sbjct: 802 IVATNIAETSLTVDGIMFVIDSGYCKLKVSSPSLGGSDLKIMEIQK 847
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 340 (124.7 bits), Expect = 7.7e-30, P = 7.7e-30
Identities = 75/191 (39%), Positives = 109/191 (57%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT L +F NAP++ + G+ +PV FY D ++ IR+++QI++ E EGDV
Sbjct: 334 ATLNAELFSNFFGNAPILYIEGKMYPVSQFYLDAESEDIVDTMIRSIIQINL-NEPEGDV 392
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGG 124
L FL GQEEI+ K +++ L EA + +PLY+ L P Q +IFE P +
Sbjct: 393 LCFLPGQEEIDNCVKSLEQLAPQLPREAPLIVPLPLYAALSPGQQSKIFEKLPKGR---- 448
Query: 125 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXX 184
RKV+++TNIAETS+T+ GV +VID G K KV+ + + +LL +PIS+AS
Sbjct: 449 --RKVILATNIAETSITVSGVKYVIDSGLRKIKVWKHNLGLSTLLTTPISQASARQRAGR 506
Query: 185 XXXTRPGKCFR 195
GK FR
Sbjct: 507 AGRESEGKVFR 517
Score = 146 (56.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 29/54 (53%), Positives = 42/54 (77%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+++TNIAETS+T+ GV +VID G K KV+ + + +LL +PIS+ASA+QRA
Sbjct: 451 VILATNIAETSITVSGVKYVIDSGLRKIKVWKHNLGLSTLLTTPISQASARQRA 504
Score = 39 (18.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 56 MCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLY 101
M ++++GD + G ++ + + KK +N E E P+Y
Sbjct: 1 MTDQIKGDEHNQVNGSKKRKRKRNKNKKNDNNTPVETSEPIPTPVY 46
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 338 (124.0 bits), Expect = 9.2e-30, P = 9.2e-30
Identities = 72/179 (40%), Positives = 107/179 (59%)
Query: 17 DNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEE 76
D A +++V GRTHPV + +T DY ++A+ TV+ IH E GD+L+FLTGQ+E+E+
Sbjct: 253 DTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHEN-PGDILVFLTGQDEVED 311
Query: 77 ACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIA 136
C+++++ NL L +P Y LP Q + F++ P +G RKVVV+TNIA
Sbjct: 312 VCEKLRELAGNL-KNCDRLWVVPCYGALPAREQMKAFDSTP----HGT--RKVVVATNIA 364
Query: 137 ETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
E S+TI G+ +VID G+ K + + VE+L+ +SKAS RPGKC+R
Sbjct: 365 EASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYR 423
Score = 132 (51.5 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 28/54 (51%), Positives = 39/54 (72%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VVV+TNIAE S+TI G+ +VID G+ K + + VE+L+ +SKASA+QRA
Sbjct: 357 VVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRA 410
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 337 (123.7 bits), Expect = 3.0e-29, P = 3.0e-29
Identities = 65/144 (45%), Positives = 101/144 (70%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+F N P+ ++PGRT PV+I ++ P+ DY+EAA++ +Q+H+ GD+L+F+ GQE+I
Sbjct: 698 FFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHL-SGAPGDILVFMPGQEDI 756
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E ++I + ++ L +A L +P+YS LP +LQ +IF+ AP G+ RK +V+TN
Sbjct: 757 EVTSEQIVEHLEEL-EKAPALAVLPIYSQLPSDLQAKIFQKAP-----DGV-RKCIVATN 809
Query: 135 IAETSLTIDGVVFVIDPGFAKQKV 158
IAETSLT+DG++FVID G+ K KV
Sbjct: 810 IAETSLTVDGIMFVIDSGYCKLKV 833
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 337 (123.7 bits), Expect = 3.1e-29, P = 3.1e-29
Identities = 65/144 (45%), Positives = 101/144 (70%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+F N P+ ++PGRT PV+I ++ P+ DY+EAA++ +Q+H+ GD+L+F+ GQE+I
Sbjct: 701 FFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHL-SGAPGDILVFMPGQEDI 759
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E ++I + ++ L +A L +P+YS LP +LQ +IF+ AP G+ RK +V+TN
Sbjct: 760 EVTSEQIVEHLEEL-EKAPALAVLPIYSQLPSDLQAKIFQKAP-----DGV-RKCIVATN 812
Query: 135 IAETSLTIDGVVFVIDPGFAKQKV 158
IAETSLT+DG++FVID G+ K KV
Sbjct: 813 IAETSLTVDGIMFVIDSGYCKLKV 836
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 329 (120.9 bits), Expect = 7.0e-29, P = 7.0e-29
Identities = 74/174 (42%), Positives = 106/174 (60%)
Query: 22 MNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRI 81
+++ GR HPV FY EP DY++ + TV ++H +E GD+L FLTGQEE+ EA +
Sbjct: 223 LSIEGRMHPVSNFYLNEPCADYVKETVETVWKLHQ-KEPPGDILAFLTGQEEVLEALDLL 281
Query: 82 KKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLT 141
++ I + E LK +P+Y ++ Q +F P P G RKVV++TNIAETS+T
Sbjct: 282 REYIAS--SEQENLKVLPMYGSMSSTDQLSVF-FTP---PKGT--RKVVLATNIAETSIT 333
Query: 142 IDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
I G+V+VID G+ K K YNP+ +SL++ P+SKAS RPGK +R
Sbjct: 334 IPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYR 387
Score = 167 (63.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 41/86 (47%), Positives = 55/86 (63%)
Query: 166 ESLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQ 225
E+L V P+ + T P K R VV++TNIAETS+TI G+V+VID G+ K
Sbjct: 291 ENLKVLPMYGSMSSTDQLSVFFTPP-KGTRK-VVLATNIAETSITIPGIVYVIDCGYVKV 348
Query: 226 KVYNPRIRVESLLVSPISKASAQQRA 251
K YNP+ +SL++ P+SKASA QRA
Sbjct: 349 KWYNPKTCSDSLVIVPVSKASAIQRA 374
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 322 (118.4 bits), Expect = 4.7e-28, P = 4.7e-28
Identities = 72/190 (37%), Positives = 114/190 (60%)
Query: 17 DNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEE 76
D + ++++ GRT+PV+I Y E +Y++ I+T++ IH + GD+L+FLTGQEEIE+
Sbjct: 243 DTSTILSIEGRTYPVDIHYLEESTSNYIQTTIQTIIDIHTTQP-PGDILVFLTGQEEIEK 301
Query: 77 ACKRIKKEIDNLGPEAGE---------LK--CIPLYSTLPPNLQQRIFEAAPANKPNGGI 125
+ + + + L + +K +P+YS L N Q ++FE+ +K
Sbjct: 302 LIQTLDDKFEILRQYHQQHHHQQQQPFMKYSLLPMYSGLSINKQIKVFESVGDSKKI--- 358
Query: 126 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXX 185
RK+++STNIAETS+TIDGVV+V+D GF K K Y+ +ESL++ P SK+S
Sbjct: 359 -RKIIISTNIAETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPTSKSSANQRAGRA 417
Query: 186 XXTRPGKCFR 195
+R GKC+R
Sbjct: 418 GRSRAGKCYR 427
Score = 164 (62.8 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 32/54 (59%), Positives = 43/54 (79%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+++STNIAETS+TIDGVV+V+D GF K K Y+ +ESL++ P SK+SA QRA
Sbjct: 361 IIISTNIAETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPTSKSSANQRA 414
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 320 (117.7 bits), Expect = 5.8e-28, P = 5.8e-28
Identities = 72/184 (39%), Positives = 109/184 (59%)
Query: 14 QYF--DNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQ 71
Q+F D M++ G+ PVE + +P +Y+++AI TV+ I+ GD+L+FL+G+
Sbjct: 188 QFFGQDKVCTMSIEGKLFPVETLFLQKPTENYVDSAIETVININSTYP-PGDILVFLSGR 246
Query: 72 EEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVV 131
+EIE K+I+ + + + L +PL++ L + Q R+F N +G RKV+
Sbjct: 247 KEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVF-----NIYDGDF-RKVIF 300
Query: 132 STNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPG 191
STNIAETS+TIDG+V+V+D GF KQ++YNP R L+ PISK+S T G
Sbjct: 301 STNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRG 360
Query: 192 KCFR 195
K FR
Sbjct: 361 KVFR 364
Score = 173 (66.0 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 33/54 (61%), Positives = 43/54 (79%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+ STNIAETS+TIDG+V+V+D GF KQ++YNP R L+ PISK+SA QR+
Sbjct: 298 VIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRS 351
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 312 (114.9 bits), Expect = 5.9e-27, P = 5.9e-27
Identities = 79/195 (40%), Positives = 116/195 (59%)
Query: 14 QYFDNAPLMNVPGRTHPV-EIFYTPEPERD-----YLEAAIRTVVQIHMCEEVEGDVLLF 67
++F + ++++PGR++PV EIF RD Y+ A++ + IH+ E EGD+L+F
Sbjct: 169 EFFGHCSVLHIPGRSYPVKEIFCNLLSPRDTGSSAYVTEAVKVTLDIHL-NEPEGDILVF 227
Query: 68 LTGQEEIEEACKRIKKEIDNLGP--EAGE-----LKCIPLYSTLPPNLQQRIFEAAPANK 120
LTGQ EIE+AC + K+ +++ E + L +PLY ++ + Q+RIF AP
Sbjct: 228 LTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLYGSMSTDQQKRIFLPAPK-- 285
Query: 121 PNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXX 180
GI RK VVSTNIA TSLTI+GV +V+D GF KQ +NPR+ ++ L V PISK+
Sbjct: 286 ---GI-RKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDILEVVPISKSEAMQ 341
Query: 181 XXXXXXXTRPGKCFR 195
T GK +R
Sbjct: 342 RAGRAGRTSSGKSYR 356
Score = 162 (62.1 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 40/87 (45%), Positives = 52/87 (59%)
Query: 165 VESLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAK 224
+E LL+ P+ + P K R VV STNIA TSLTI+GV +V+D GF K
Sbjct: 259 IEGLLILPLYGSMSTDQQKRIFLPAP-KGIRKCVV-STNIAATSLTIEGVRYVVDSGFVK 316
Query: 225 QKVYNPRIRVESLLVSPISKASAQQRA 251
Q +NPR+ ++ L V PISK+ A QRA
Sbjct: 317 QLNHNPRVGLDILEVVPISKSEAMQRA 343
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 311 (114.5 bits), Expect = 7.6e-27, P = 7.6e-27
Identities = 77/204 (37%), Positives = 112/204 (54%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPV-EIFYT---PEPERD--YLEAAIRTVVQIHMCE 58
AT ++ N P+ +PGRT+PV E F P+ + Y++ ++ + +H
Sbjct: 176 ATLETEKLSSFYGNCPVFTIPGRTYPVKETFCNLIGPKDKESSVYVKEVVKMTLDVHT-N 234
Query: 59 EVEGDVLLFLTGQEEIEEACKRI--KKEI-----DNLGPEAGELKCIPLYSTLPPNLQQR 111
E GD+L+FLTGQ EIE+AC + K EI D L + LY ++P + Q++
Sbjct: 235 EAAGDILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVDGLLILSLYGSMPTDQQRQ 294
Query: 112 IFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVS 171
IF+ AP G+ RK VV+TNIA TSLTIDG+ +++D GF KQ +N R+ ++ L V
Sbjct: 295 IFQPAPK-----GV-RKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHNSRVGLDILEVV 348
Query: 172 PISKASXXXXXXXXXXTRPGKCFR 195
PISK+ T GKCFR
Sbjct: 349 PISKSEAQQRAGRAGRTAAGKCFR 372
Score = 153 (58.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 31/53 (58%), Positives = 41/53 (77%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV+TNIA TSLTIDG+ +++D GF KQ +N R+ ++ L V PISK+ AQQRA
Sbjct: 307 VVATNIAATSLTIDGIRYIVDSGFVKQLNHNSRVGLDILEVVPISKSEAQQRA 359
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 309 (113.8 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 69/174 (39%), Positives = 100/174 (57%)
Query: 22 MNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRI 81
+ + GR PVEI ++P+P + ++TV +IH E + GD+L+FL GQE IEE + I
Sbjct: 340 LKIEGRQFPVEIIHSPKPVPVLADEVVKTVFKIHCGEPLPGDILVFLYGQEPIEEIQRLI 399
Query: 82 KKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLT 141
++ L + ++K +PL+ L Q F +P G RKVV++TNIAETS+T
Sbjct: 400 EEYAATLASDVPKIKALPLFGQLSMEAQHTAF------RPLKGRVRKVVLATNIAETSVT 453
Query: 142 IDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
+ GV +VID G +K K Y + +ESLLV ISK+S PGKC+R
Sbjct: 454 VPGVRYVIDTGKSKMKQYRASLGLESLLVDAISKSSAIQRAGRAGREAPGKCYR 507
Score = 145 (56.1 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 32/54 (59%), Positives = 41/54 (75%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
VV++TNIAETS+T+ GV +VID G +K K Y + +ESLLV ISK+SA QRA
Sbjct: 441 VVLATNIAETSVTVPGVRYVIDTGKSKMKQYRASLGLESLLVDAISKSSAIQRA 494
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 306 (112.8 bits), Expect = 2.4e-26, P = 2.4e-26
Identities = 76/194 (39%), Positives = 110/194 (56%)
Query: 15 YFDNAPLMNVPGRTHPV-EIFYTPEPERD-----YLEAAIRTVVQIHMCEEVEGDVLLFL 68
+F N P+ ++PGR +PV E F RD Y++A ++ + IH+ E+ GD+L+FL
Sbjct: 144 FFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL-NEMAGDILVFL 202
Query: 69 TGQEEIEEACK-------RIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKP 121
TGQ EIE++C+ + + D L +P Y ++ + Q+RIF P P
Sbjct: 203 TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPP---P 259
Query: 122 NGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXX 181
GI RK V+STNI+ TSLTIDG+ +V+D GF KQ +NPR+ ++ L V PISK+
Sbjct: 260 --GI-RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQR 316
Query: 182 XXXXXXTRPGKCFR 195
T GKCFR
Sbjct: 317 SGRAGRTSSGKCFR 330
Score = 149 (57.5 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+STNI+ TSLTIDG+ +V+D GF KQ +NPR+ ++ L V PISK+ A QR+
Sbjct: 265 VISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRS 317
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 306 (112.8 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 78/193 (40%), Positives = 108/193 (55%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT + ++F+NAP++ V GR V+ +Y P D ++A IR +QI+ EE+ GD+
Sbjct: 237 ATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEEL-GDI 295
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIP--LYSTLPPNLQQRIFEAAPANKPN 122
L FL GQEEI++A ++K + EA +P LY+ LP Q +F AP
Sbjct: 296 LCFLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVF--APIK--- 350
Query: 123 GGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXX 182
G RKVV STNIAETS+TI GV FV+D G K KV+ ++ + +LL PIS+AS
Sbjct: 351 -GFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRS 409
Query: 183 XXXXXTRPGKCFR 195
GK FR
Sbjct: 410 GRAGRESEGKSFR 422
Score = 152 (58.6 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 34/62 (54%), Positives = 44/62 (70%)
Query: 190 PGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQ 249
P K F+ VV STNIAETS+TI GV FV+D G K KV+ ++ + +LL PIS+ASA Q
Sbjct: 348 PIKGFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQ 407
Query: 250 RA 251
R+
Sbjct: 408 RS 409
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 209 (78.6 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 50/124 (40%), Positives = 69/124 (55%)
Query: 72 EEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVV 131
EE EE + ++ ID+ E G L +PLYS LP Q ++FE P P I +V
Sbjct: 748 EENEEEEEGFEESIDSKESEVGPLYVLPLYSLLPTKQQMKVFEDPP---PGSRI---CIV 801
Query: 132 STNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPG 191
+TN+AETSLTI G+ +V+D G +K++ YN V+S V +SKAS T PG
Sbjct: 802 ATNVAETSLTIPGIRYVVDCGRSKERKYNQENGVQSFEVDWVSKASANQRAGRAGRTGPG 861
Query: 192 KCFR 195
C+R
Sbjct: 862 HCYR 865
Score = 137 (53.3 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 29/55 (52%), Positives = 40/55 (72%)
Query: 197 IVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
I +V+TN+AETSLTI G+ +V+D G +K++ YN V+S V +SKASA QRA
Sbjct: 798 ICIVATNVAETSLTIPGIRYVVDCGRSKERKYNQENGVQSFEVDWVSKASANQRA 852
Score = 130 (50.8 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 20 PLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACK 79
P++NV R +PV I + + DYLE A + +IH + EG +L+FLTGQ EI K
Sbjct: 636 PIINVQARQYPVSIHFNKKTNYDYLEEAFKKTCKIHR-KLPEGGILIFLTGQNEITTLVK 694
Query: 80 RIKKE 84
++++E
Sbjct: 695 KLRQE 699
Score = 37 (18.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 75 EEACKRIKKEIDN 87
EE KR+KKE D+
Sbjct: 246 EEEKKRLKKEDDD 258
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 306 (112.8 bits), Expect = 3.0e-26, P = 3.0e-26
Identities = 76/194 (39%), Positives = 110/194 (56%)
Query: 15 YFDNAPLMNVPGRTHPV-EIFYTPEPERD-----YLEAAIRTVVQIHMCEEVEGDVLLFL 68
+F N P+ ++PGR +PV E F RD Y++A ++ + IH+ E+ GD+L+FL
Sbjct: 221 FFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL-NEMAGDILVFL 279
Query: 69 TGQEEIEEACK-------RIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKP 121
TGQ EIE++C+ + + D L +P Y ++ + Q+RIF P P
Sbjct: 280 TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPP---P 336
Query: 122 NGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXX 181
GI RK V+STNI+ TSLTIDG+ +V+D GF KQ +NPR+ ++ L V PISK+
Sbjct: 337 --GI-RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQR 393
Query: 182 XXXXXXTRPGKCFR 195
T GKCFR
Sbjct: 394 SGRAGRTSSGKCFR 407
Score = 149 (57.5 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+STNI+ TSLTIDG+ +V+D GF KQ +NPR+ ++ L V PISK+ A QR+
Sbjct: 342 VISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRS 394
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 306 (112.8 bits), Expect = 3.0e-26, P = 3.0e-26
Identities = 76/194 (39%), Positives = 110/194 (56%)
Query: 15 YFDNAPLMNVPGRTHPV-EIFYTPEPERD-----YLEAAIRTVVQIHMCEEVEGDVLLFL 68
+F N P+ ++PGR +PV E F RD Y++A ++ + IH+ E+ GD+L+FL
Sbjct: 221 FFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL-NEMAGDILVFL 279
Query: 69 TGQEEIEEACK-------RIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKP 121
TGQ EIE++C+ + + D L +P Y ++ + Q+RIF P P
Sbjct: 280 TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPP---P 336
Query: 122 NGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXX 181
GI RK V+STNI+ TSLTIDG+ +V+D GF KQ +NPR+ ++ L V PISK+
Sbjct: 337 --GI-RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQR 393
Query: 182 XXXXXXTRPGKCFR 195
T GKCFR
Sbjct: 394 SGRAGRTSSGKCFR 407
Score = 149 (57.5 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+STNI+ TSLTIDG+ +V+D GF KQ +NPR+ ++ L V PISK+ A QR+
Sbjct: 342 VISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRS 394
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 306 (112.8 bits), Expect = 3.0e-26, P = 3.0e-26
Identities = 76/194 (39%), Positives = 110/194 (56%)
Query: 15 YFDNAPLMNVPGRTHPV-EIFYTPEPERD-----YLEAAIRTVVQIHMCEEVEGDVLLFL 68
+F N P+ ++PGR +PV E F RD Y++A ++ + IH+ E+ GD+L+FL
Sbjct: 221 FFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL-NEMAGDILVFL 279
Query: 69 TGQEEIEEACK-------RIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKP 121
TGQ EIE++C+ + + D L +P Y ++ + Q+RIF P P
Sbjct: 280 TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPP---P 336
Query: 122 NGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXX 181
GI RK V+STNI+ TSLTIDG+ +V+D GF KQ +NPR+ ++ L V PISK+
Sbjct: 337 --GI-RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQR 393
Query: 182 XXXXXXTRPGKCFR 195
T GKCFR
Sbjct: 394 SGRAGRTSSGKCFR 407
Score = 149 (57.5 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+STNI+ TSLTIDG+ +V+D GF KQ +NPR+ ++ L V PISK+ A QR+
Sbjct: 342 VISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRS 394
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 306 (112.8 bits), Expect = 3.0e-26, P = 3.0e-26
Identities = 76/194 (39%), Positives = 110/194 (56%)
Query: 15 YFDNAPLMNVPGRTHPV-EIFYTPEPERD-----YLEAAIRTVVQIHMCEEVEGDVLLFL 68
+F N P+ ++PGR +PV E F RD Y++A ++ + IH+ E+ GD+L+FL
Sbjct: 221 FFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL-NEMAGDILVFL 279
Query: 69 TGQEEIEEACK-------RIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKP 121
TGQ EIE++C+ + + D L +P Y ++ + Q+RIF P P
Sbjct: 280 TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPP---P 336
Query: 122 NGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXX 181
GI RK V+STNI+ TSLTIDG+ +V+D GF KQ +NPR+ ++ L V PISK+
Sbjct: 337 --GI-RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQR 393
Query: 182 XXXXXXTRPGKCFR 195
T GKCFR
Sbjct: 394 SGRAGRTASGKCFR 407
Score = 149 (57.5 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+STNI+ TSLTIDG+ +V+D GF KQ +NPR+ ++ L V PISK+ A QR+
Sbjct: 342 VISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRS 394
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 306 (112.8 bits), Expect = 3.0e-26, P = 3.0e-26
Identities = 76/194 (39%), Positives = 110/194 (56%)
Query: 15 YFDNAPLMNVPGRTHPV-EIFYTPEPERD-----YLEAAIRTVVQIHMCEEVEGDVLLFL 68
+F N P+ ++PGR +PV E F RD Y++A ++ + IH+ E+ GD+L+FL
Sbjct: 221 FFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL-NEMAGDILVFL 279
Query: 69 TGQEEIEEACK-------RIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKP 121
TGQ EIE++C+ + + D L +P Y ++ + Q+RIF P P
Sbjct: 280 TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPP---P 336
Query: 122 NGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXX 181
GI RK V+STNI+ TSLTIDG+ +V+D GF KQ +NPR+ ++ L V PISK+
Sbjct: 337 --GI-RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQR 393
Query: 182 XXXXXXTRPGKCFR 195
T GKCFR
Sbjct: 394 SGRAGRTASGKCFR 407
Score = 149 (57.5 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+STNI+ TSLTIDG+ +V+D GF KQ +NPR+ ++ L V PISK+ A QR+
Sbjct: 342 VISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRS 394
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 306 (112.8 bits), Expect = 3.0e-26, P = 3.0e-26
Identities = 76/194 (39%), Positives = 110/194 (56%)
Query: 15 YFDNAPLMNVPGRTHPV-EIFYTPEPERD-----YLEAAIRTVVQIHMCEEVEGDVLLFL 68
+F N P+ ++PGR +PV E F RD Y++A ++ + IH+ E+ GD+L+FL
Sbjct: 221 FFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL-NEMAGDILVFL 279
Query: 69 TGQEEIEEACK-------RIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKP 121
TGQ EIE++C+ + + D L +P Y ++ + Q+RIF P P
Sbjct: 280 TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPP---P 336
Query: 122 NGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXX 181
GI RK V+STNI+ TSLTIDG+ +V+D GF KQ +NPR+ ++ L V PISK+
Sbjct: 337 --GI-RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQR 393
Query: 182 XXXXXXTRPGKCFR 195
T GKCFR
Sbjct: 394 SGRAGRTSSGKCFR 407
Score = 149 (57.5 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+STNI+ TSLTIDG+ +V+D GF KQ +NPR+ ++ L V PISK+ A QR+
Sbjct: 342 VISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRS 394
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 306 (112.8 bits), Expect = 3.7e-26, P = 3.7e-26
Identities = 76/194 (39%), Positives = 110/194 (56%)
Query: 15 YFDNAPLMNVPGRTHPV-EIFYTPEPERD-----YLEAAIRTVVQIHMCEEVEGDVLLFL 68
+F N P+ ++PGR +PV E F RD Y++A ++ + IH+ E+ GD+L+FL
Sbjct: 299 FFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL-NEMAGDILVFL 357
Query: 69 TGQEEIEEACK-------RIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKP 121
TGQ EIE++C+ + + D L +P Y ++ + Q+RIF P P
Sbjct: 358 TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPP---P 414
Query: 122 NGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXX 181
GI RK V+STNI+ TSLTIDG+ +V+D GF KQ +NPR+ ++ L V PISK+
Sbjct: 415 --GI-RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQR 471
Query: 182 XXXXXXTRPGKCFR 195
T GKCFR
Sbjct: 472 SGRAGRTSSGKCFR 485
Score = 149 (57.5 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+STNI+ TSLTIDG+ +V+D GF KQ +NPR+ ++ L V PISK+ A QR+
Sbjct: 420 VISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRS 472
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 184 (69.8 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 42/97 (43%), Positives = 57/97 (58%)
Query: 99 PLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKV 158
P+YS L Q +IF+ RK++VSTNIAETSLT+DG+ +VID G+ K KV
Sbjct: 776 PIYSQLSSEQQSKIFKKYDL--------RKIIVSTNIAETSLTLDGIKYVIDTGYCKLKV 827
Query: 159 YNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
YN I ++ L V+PIS+A+ T G C+R
Sbjct: 828 YNQTIGMDVLQVTPISQANANQRSGRAGRTGAGICYR 864
Score = 165 (63.1 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 32/54 (59%), Positives = 44/54 (81%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
++VSTNIAETSLT+DG+ +VID G+ K KVYN I ++ L V+PIS+A+A QR+
Sbjct: 798 IIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGMDVLQVTPISQANANQRS 851
Score = 152 (58.6 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVE----GDVLLFLTG 70
+F NAP+ N+ GRT V I Y P DY+E A++ +QIH+ + GD+L+F+TG
Sbjct: 642 FFGNAPIYNIQGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTG 701
Query: 71 QEEIEEAC 78
QE+I C
Sbjct: 702 QEDINATC 709
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 184 (69.8 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 42/97 (43%), Positives = 57/97 (58%)
Query: 99 PLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKV 158
P+YS L Q +IF+ RK++VSTNIAETSLT+DG+ +VID G+ K KV
Sbjct: 776 PIYSQLSSEQQSKIFKKYDL--------RKIIVSTNIAETSLTLDGIKYVIDTGYCKLKV 827
Query: 159 YNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
YN I ++ L V+PIS+A+ T G C+R
Sbjct: 828 YNQTIGMDVLQVTPISQANANQRSGRAGRTGAGICYR 864
Score = 165 (63.1 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 32/54 (59%), Positives = 44/54 (81%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
++VSTNIAETSLT+DG+ +VID G+ K KVYN I ++ L V+PIS+A+A QR+
Sbjct: 798 IIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGMDVLQVTPISQANANQRS 851
Score = 152 (58.6 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVE----GDVLLFLTG 70
+F NAP+ N+ GRT V I Y P DY+E A++ +QIH+ + GD+L+F+TG
Sbjct: 642 FFGNAPIYNIQGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTG 701
Query: 71 QEEIEEAC 78
QE+I C
Sbjct: 702 QEDINATC 709
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 201 (75.8 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 52/134 (38%), Positives = 74/134 (55%)
Query: 93 GELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPG 152
G+L+ +PLY+ L P Q R+FE + R VVV+TN+AETSLTI G+ +V+D G
Sbjct: 645 GKLRVLPLYAMLSPAAQLRVFEEVEKEE------RLVVVATNVAETSLTIPGIKYVVDTG 698
Query: 153 FAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR-YIVVVSTNIAETS--- 208
K K Y+ + +ES V IS+AS T PG C+R Y V +NI E S
Sbjct: 699 RVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLP 758
Query: 209 ----LTIDGVVFVI 218
+ +DGV+ ++
Sbjct: 759 EIMKVPVDGVILLM 772
Score = 136 (52.9 bits), Expect = 7.8e-15, Sum P(2) = 7.8e-15
Identities = 30/55 (54%), Positives = 40/55 (72%)
Query: 197 IVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+VVV+TN+AETSLTI G+ +V+D G K K Y+ + +ES V IS+ASA QRA
Sbjct: 674 LVVVATNVAETSLTIPGIKYVVDTGRVKVKNYDSKTGMESYEVDWISQASASQRA 728
Score = 127 (49.8 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 28/84 (33%), Positives = 51/84 (60%)
Query: 13 RQYFDNAP-LMNVPGRTHPVEIFYTPEPER-DYLEAAIRTVVQIHMCEEVEGDVLLFLTG 70
++ F N P L+ VP R +PV I ++ + E DY+ A + V+ IH + +G +L+F+TG
Sbjct: 434 KRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVMSIHK-KLPQGGILVFVTG 492
Query: 71 QEEIEEACKRIKKEIDNLGPEAGE 94
Q E++ C++++K L +A +
Sbjct: 493 QREVDYLCEKLRKSSKELVVQAAK 516
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 183 (69.5 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
Identities = 44/89 (49%), Positives = 55/89 (61%)
Query: 107 NLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 166
N Q+RIF P P GI RK V+STNI+ TSLTIDG+ +V+D GF KQ +NPR+ ++
Sbjct: 277 NQQRRIFLPPP---P--GI-RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 330
Query: 167 SLLVSPISKASXXXXXXXXXXTRPGKCFR 195
L V PISK+ T GKCFR
Sbjct: 331 ILEVVPISKSEALQRSGRAGRTSSGKCFR 359
Score = 149 (57.5 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+STNI+ TSLTIDG+ +V+D GF KQ +NPR+ ++ L V PISK+ A QR+
Sbjct: 294 VISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRS 346
Score = 138 (53.6 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
Identities = 29/71 (40%), Positives = 46/71 (64%)
Query: 15 YFDNAPLMNVPGRTHPV-EIFYTPEPERD-----YLEAAIRTVVQIHMCEEVEGDVLLFL 68
+F N P+ ++PGR +PV E F RD Y++A ++ + IH+ E+ GD+L+FL
Sbjct: 122 FFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL-NEMAGDILVFL 180
Query: 69 TGQEEIEEACK 79
TGQ EIE++C+
Sbjct: 181 TGQFEIEKSCE 191
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 295 (108.9 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 72/197 (36%), Positives = 104/197 (52%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYT-PEPER-----DYLEAAIRTVVQIHMCE 58
AT + + YF+NA ++ V GRT P+E+F+ P+ + DY+ A+ V +H+ E
Sbjct: 318 ATLQAEKFQSYFNNAKVVLVAGRTFPIEVFHVNPKINKSFSSTDYVYNAVICVKYVHLTE 377
Query: 59 EVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPA 118
D+L+FLTG EEIE ++ + +L A L +PLY+ L P Q+ F P
Sbjct: 378 PKGRDILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPEKQKEAFRKTPQ 437
Query: 119 NKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASX 178
RKV++STNIAETS+TI G+ VID G K K + R++ L V +SKA
Sbjct: 438 G------ARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQA 491
Query: 179 XXXXXXXXXTRPGKCFR 195
PGKC+R
Sbjct: 492 KQRAGRAGRDAPGKCYR 508
Score = 125 (49.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V++STNIAETS+TI G+ VID G K K + R++ L V +SKA A+QRA
Sbjct: 442 VIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRA 495
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 295 (108.9 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 70/189 (37%), Positives = 108/189 (57%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTP-------EPERDYLEAAIRTVVQIHMCEEVEGDVLL 66
++F NAP++ V GRT+PVE+ Y P E +RD LE + V ++ C+E GD+L+
Sbjct: 249 KHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDEL--CDEGLGDILI 306
Query: 67 FLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIG 126
F+ G+ EI + + K NL + + +PLY+ L Q +IF+ P+ G
Sbjct: 307 FMNGEREIRDTADALSKR--NLR----DTEIVPLYARLSAGEQNKIFQ------PHAG-- 352
Query: 127 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXX 186
R++V++TN+AETSLT+ G+ +VIDPG A+ Y+ R +V+ L + PIS+AS
Sbjct: 353 RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCG 412
Query: 187 XTRPGKCFR 195
T G C R
Sbjct: 413 RTEEGICIR 421
Score = 145 (56.1 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+V++TN+AETSLT+ G+ +VIDPG A+ Y+ R +V+ L + PIS+ASA QR
Sbjct: 355 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 407
Score = 38 (18.4 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 85 IDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNG 123
+ L P +LK I +T+ P + F AP + +G
Sbjct: 223 LKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSG 261
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 295 (108.9 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 70/189 (37%), Positives = 108/189 (57%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTP-------EPERDYLEAAIRTVVQIHMCEEVEGDVLL 66
++F NAP++ V GRT+PVE+ Y P E +RD LE + V ++ C+E GD+L+
Sbjct: 249 KHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDEL--CDEGLGDILI 306
Query: 67 FLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIG 126
F+ G+ EI + + K NL + + +PLY+ L Q +IF+ P+ G
Sbjct: 307 FMNGEREIRDTADALSKR--NLR----DTEIVPLYARLSAGEQNKIFQ------PHAG-- 352
Query: 127 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXX 186
R++V++TN+AETSLT+ G+ +VIDPG A+ Y+ R +V+ L + PIS+AS
Sbjct: 353 RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCG 412
Query: 187 XTRPGKCFR 195
T G C R
Sbjct: 413 RTEEGICIR 421
Score = 145 (56.1 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+V++TN+AETSLT+ G+ +VIDPG A+ Y+ R +V+ L + PIS+ASA QR
Sbjct: 355 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 407
Score = 38 (18.4 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 85 IDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNG 123
+ L P +LK I +T+ P + F AP + +G
Sbjct: 223 LKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSG 261
>UNIPROTKB|B0V0F7 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 PROSITE:PS00690
GO:GO:0005524 GO:GO:0003676 eggNOG:COG1643 GO:GO:0008026
HGNC:HGNC:2739 EMBL:CR759873 IPI:IPI00894447 SMR:B0V0F7
Ensembl:ENST00000456005 UCSC:uc011elj.1 Uniprot:B0V0F7
Length = 188
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 51/103 (49%), Positives = 73/103 (70%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+FD+AP+ +PGR PV+IFYT PE DYLEA + +V+QIH+ + GD+L+FLTGQEEI
Sbjct: 82 FFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQP-PGDILVFLTGQEEI 140
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAP 117
E AC+ ++ LG + EL +P+Y+ LP ++Q RIF+ P
Sbjct: 141 EAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTP 183
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 287 (106.1 bits), Expect = 7.7e-24, P = 7.7e-24
Identities = 70/191 (36%), Positives = 109/191 (57%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTP---------EPERDYLEAAIRTVVQIHMCEEVEGDV 64
++FDNAP++ VPGRT+PVEI Y P E ER +A + V ++H E GD+
Sbjct: 236 RHFDNAPIVRVPGRTYPVEIRYRPPDSAEEESDETERGEQQAILDAVDELH--RENTGDI 293
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGG 124
L+FL+G+ EI + + ++K + + +PLYS L + Q++IF KP+G
Sbjct: 294 LIFLSGEREIRDTAESLRKH------HPADCEVLPLYSRLTVSEQEKIF------KPHGR 341
Query: 125 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXX 184
R++V++TN+AETSLT+ G+ VID G+A+ Y+ R +++ L + IS+AS
Sbjct: 342 --RRIVLATNVAETSLTVPGIRGVIDAGYARISRYSHRSKLQRLPIEKISRASANQRAGR 399
Query: 185 XXXTRPGKCFR 195
PG C R
Sbjct: 400 CGRVGPGVCIR 410
Score = 129 (50.5 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 26/54 (48%), Positives = 40/54 (74%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+V++TN+AETSLT+ G+ VID G+A+ Y+ R +++ L + IS+ASA QRA
Sbjct: 344 IVLATNVAETSLTVPGIRGVIDAGYARISRYSHRSKLQRLPIEKISRASANQRA 397
Score = 39 (18.8 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 90 PEAGELKCIPLYSTLPPNLQQRIFEAAP 117
P +LK + +T+ P R F+ AP
Sbjct: 215 PRRHDLKLVITSATIDPERFSRHFDNAP 242
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 279 (103.3 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 51/103 (49%), Positives = 73/103 (70%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
+FD+AP+ +PGR PV+IFYT PE DYLEA + +V+QIH+ + GD+L+FLTGQEEI
Sbjct: 563 FFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQP-PGDILVFLTGQEEI 621
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAP 117
E AC+ ++ LG + EL +P+Y+ LP ++Q RIF+ P
Sbjct: 622 EAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTP 664
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 276 (102.2 bits), Expect = 4.0e-23, P = 4.0e-23
Identities = 70/183 (38%), Positives = 96/183 (52%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
YF N M + GRT+PV + +T E DY+ + T+ IH DVL+FLTGQEEI
Sbjct: 236 YF-NCKGMYLEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEI 294
Query: 75 EEACKRIKK--EIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVS 132
E ++I++ +ID G +L+ LY+ L Q F PAN RKV+++
Sbjct: 295 ESLAQQIRQLAKIDTTGTT--DLRVFTLYAQLSQGKQLECFVPTPANV------RKVILA 346
Query: 133 TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGK 192
TNIAETS+TI G+ VID GF K+K +N ++ L ISKA G
Sbjct: 347 TNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGT 406
Query: 193 CFR 195
C+R
Sbjct: 407 CYR 409
Score = 119 (46.9 bits), Expect = 0.00023, P = 0.00023
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+++TNIAETS+TI G+ VID GF K+K +N ++ L ISKA A QRA
Sbjct: 343 VILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRA 396
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 196 (74.1 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 51/125 (40%), Positives = 67/125 (53%)
Query: 71 QEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVV 130
++E E + I E D+ P AG L +PLYSTLP + Q R+F+ P R VV
Sbjct: 824 EDEFEIGKEDIITE-DDEKP-AGPLFVLPLYSTLPTSKQMRVFQTPPLGS------RLVV 875
Query: 131 VSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRP 190
V+TN+AETSLTI + +V+D G KQ+ YN + S V SKAS T P
Sbjct: 876 VATNLAETSLTIPNIKYVVDTGRVKQRYYNKDNGISSFEVGWTSKASADQRAGRAGRTGP 935
Query: 191 GKCFR 195
G C+R
Sbjct: 936 GHCYR 940
Score = 131 (51.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 29/55 (52%), Positives = 37/55 (67%)
Query: 197 IVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+VVV+TN+AETSLTI + +V+D G KQ+ YN + S V SKASA QRA
Sbjct: 873 LVVVATNLAETSLTIPNIKYVVDTGRVKQRYYNKDNGISSFEVGWTSKASADQRA 927
Score = 114 (45.2 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 22/65 (33%), Positives = 41/65 (63%)
Query: 20 PLMNVPGRTHPVEIFYTPEPER-DYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEAC 78
P++N+P R PV I + + E +Y++ + VV+IH G +L+F+TG++EIE C
Sbjct: 606 PVINIPTRQFPVTIHFNKKTELVNYIDECYKKVVKIHK-NLPSGGILVFVTGKQEIEYLC 664
Query: 79 KRIKK 83
++++
Sbjct: 665 SKLRR 669
Score = 50 (22.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 24/88 (27%), Positives = 41/88 (46%)
Query: 56 MCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIF-E 114
+ EV+ D LL I+EA +R NL + I L S + P L+++++ +
Sbjct: 513 LMREVQTDFLLSQYSSILIDEAHER------NLNTDI----LIGLLSRIVP-LRKKLYLK 561
Query: 115 AAPANKPNGGIGRKVVVSTNIAETSLTI 142
+ NK NG IG ++ + S T+
Sbjct: 562 SLATNKANGTIGVDMIYPLKLVVMSATL 589
Score = 41 (19.5 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 71 QEEIEEACKRIKKEID 86
+EE+EE ++ EID
Sbjct: 325 KEELEEIANQVNSEID 340
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 278 (102.9 bits), Expect = 7.1e-23, P = 7.1e-23
Identities = 67/188 (35%), Positives = 107/188 (56%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTP------EPERDYLEAAIRTVVQIHMCEEVEGDVLLF 67
++F+NAP++ V GRT+PVE+ Y P + ERD L+A V ++ +E GD+L+F
Sbjct: 239 RHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS--QESHGDILIF 296
Query: 68 LTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGR 127
++G+ EI + + K NL + +PLY+ L + Q R+F++ GR
Sbjct: 297 MSGEREIRDTADALNKL--NLR----HTEILPLYARLSNSEQNRVFQSHS--------GR 342
Query: 128 KVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXX 187
++V++TN+AETSLT+ G+ +VIDPG A+ Y+ R +V+ L + PIS+AS
Sbjct: 343 RIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGR 402
Query: 188 TRPGKCFR 195
G C R
Sbjct: 403 VSEGICIR 410
Score = 145 (56.1 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+V++TN+AETSLT+ G+ +VIDPG A+ Y+ R +V+ L + PIS+ASA QR
Sbjct: 344 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 396
Score = 43 (20.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 23/72 (31%), Positives = 32/72 (44%)
Query: 59 EVEGDVLLFLTGQEEIEEACKRIKKEIDNL-G------PEAGELKCIPLYSTLPPNLQQR 111
E++ D LL I+EA +R ID L G P +LK I +T+ P R
Sbjct: 181 EIQQDRLLMQYDTIIIDEAHER-SLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSR 239
Query: 112 IFEAAPANKPNG 123
F AP + +G
Sbjct: 240 HFNNAPIIEVSG 251
Score = 40 (19.1 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 120 KPNGGIGRKVVVSTNIAETS---LTIDGVV 146
+P G IG KV S ++++ + L DG++
Sbjct: 149 EPGGCIGYKVRFSDHVSDNTMVKLMTDGIL 178
>UNIPROTKB|Q7L7V1 [details] [associations]
symbol:DHX32 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32" species:9606 "Homo sapiens"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 PROSITE:PS51194 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 EMBL:CH471066 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 EMBL:AY064247 EMBL:AL360176
UniGene:Hs.370292 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOVERGEN:HBG039428 EMBL:AF427340 EMBL:AF427341 EMBL:AY064250
EMBL:AK001556 EMBL:AK001751 EMBL:AK024869 EMBL:BC002473
EMBL:BC037925 EMBL:BC068471 EMBL:AL162051 IPI:IPI00334601
IPI:IPI00644447 PIR:T47184 RefSeq:NP_060650.2
ProteinModelPortal:Q7L7V1 SMR:Q7L7V1 IntAct:Q7L7V1 STRING:Q7L7V1
PhosphoSite:Q7L7V1 DMDM:74759011 PRIDE:Q7L7V1 DNASU:55760
Ensembl:ENST00000284688 Ensembl:ENST00000284690
Ensembl:ENST00000368721 Ensembl:ENST00000415732 GeneID:55760
KEGG:hsa:55760 UCSC:uc001lje.1 UCSC:uc001ljf.1 CTD:55760
GeneCards:GC10M127515 HGNC:HGNC:16717 HPA:HPA048872 MIM:607960
neXtProt:NX_Q7L7V1 PharmGKB:PA27219 InParanoid:Q7L7V1 OMA:LACEQDI
OrthoDB:EOG4N30NF PhylomeDB:Q7L7V1 ChiTaRS:DHX32 GenomeRNAi:55760
NextBio:60779 Bgee:Q7L7V1 Genevestigator:Q7L7V1 Uniprot:Q7L7V1
Length = 743
Score = 274 (101.5 bits), Expect = 7.6e-23, P = 7.6e-23
Identities = 61/181 (33%), Positives = 103/181 (56%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
Y+ N P++ V + HPVE+ Y E ++D E+ +R + +IH E +GD+++FL +++I
Sbjct: 228 YYGNVPVIEVKNK-HPVEVVYLSEAQKDSFESILRLIFEIHHSGE-KGDIVVFLACEQDI 285
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGI-GRKVVVST 133
E+ C+ + + NL P+ GEL +PLY P + +F+ + + R+VV++T
Sbjct: 286 EKVCETVYQG-SNLNPDLGELVVVPLY----PKEKCSLFKPLDETEKRCQVYQRRVVLTT 340
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
+ E + + V FVID G ++KVYNPRIR SL++ PIS++ + GK
Sbjct: 341 SSGEFLIWSNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQILGSSSSGKF 400
Query: 194 F 194
F
Sbjct: 401 F 401
Score = 118 (46.6 bits), Expect = 0.00033, P = 0.00033
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
VV++T+ E + + V FVID G ++KVYNPRIR SL++ PIS++ A+ R
Sbjct: 336 VVLTTSSGEFLIWSNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIR 388
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 271 (100.5 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 63/180 (35%), Positives = 101/180 (56%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
Y+ N PL+ V + HPVE+ Y ++D E+ +R + +IH E +GDV++FL +++I
Sbjct: 235 YYGNVPLLEVRNK-HPVEVVYLSGAQKDPFESVVRLIFEIHRSGE-QGDVVVFLACEQDI 292
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTN 134
E+ + + +E NL P+ GEL IPLY +L + + E K R+VV++T+
Sbjct: 293 EKTYEIVCQEGSNLNPDVGELVVIPLYPKEKCSLFRPVDET---EKRCQASQRRVVLTTS 349
Query: 135 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
E+ + V FVID G +++VYNPRIR SL++ PIS++ + GK F
Sbjct: 350 CGESLIWSHTVRFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLF 409
Score = 115 (45.5 bits), Expect = 0.00073, P = 0.00073
Identities = 24/53 (45%), Positives = 37/53 (69%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
VV++T+ E+ + V FVID G +++VYNPRIR SL++ PIS++ A+ R
Sbjct: 344 VVLTTSCGESLIWSHTVRFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIR 396
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 192 (72.6 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 50/127 (39%), Positives = 71/127 (55%)
Query: 70 GQEEIEEACKRIKKEIDNLGPEAGE-LKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRK 128
G++E +E + + E+ G A + L +PLYS LP Q R+F+ KP G R
Sbjct: 704 GEDEEDEEEEGFE-EVLTEGQTANDPLYVLPLYSLLPTKEQMRVFQ-----KPPQG-SRL 756
Query: 129 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXT 188
+V+TN+AETSLTI GV +V+D G +K++ YN V+S V +SKAS T
Sbjct: 757 CIVATNVAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRT 816
Query: 189 RPGKCFR 195
PG C+R
Sbjct: 817 GPGHCYR 823
Score = 134 (52.2 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 197 IVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+ +V+TN+AETSLTI GV +V+D G +K++ YN V+S V +SKASA QR+
Sbjct: 756 LCIVATNVAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRS 810
Score = 110 (43.8 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 20 PLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACK 79
P++ V R PV I + +Y + A R +IH + G +L+FLTGQ+EI K
Sbjct: 579 PVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTCKIHQ-KLPPGAILVFLTGQQEITHMVK 637
Query: 80 RIKKE 84
R++KE
Sbjct: 638 RLRKE 642
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 268 (99.4 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 61/181 (33%), Positives = 103/181 (56%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
Y+ N PL+ V + HPVE+ Y +++ LE+ +R + +IH E +GD+++FL +++I
Sbjct: 228 YYGNVPLIEVK-KQHPVEVVYLSGAQKESLESILRLIFEIHQSGE-KGDIVVFLACEQDI 285
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGI-GRKVVVST 133
E+A + + +E NL P+ GEL +PLY P + +F+ + + R+VV++
Sbjct: 286 EKAYEIVCQEGSNLNPDLGELVVVPLY----PKEKCALFKPNDETEKRCQVYQRRVVLTA 341
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
+ E+ + + V FVID G ++KVYNPRIR SL+ PIS++ + GK
Sbjct: 342 SSGESLIWSNTVRFVIDVGVERRKVYNPRIRANSLVTQPISQSQAEIRKQILGSSSSGKL 401
Query: 194 F 194
F
Sbjct: 402 F 402
>UNIPROTKB|A7MBI4 [details] [associations]
symbol:DHX32 "DHX32 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
EMBL:DAAA02059534 EMBL:DAAA02059535 EMBL:DAAA02059536 EMBL:BC151578
IPI:IPI00715161 RefSeq:NP_001094614.1 UniGene:Bt.44006
Ensembl:ENSBTAT00000007619 GeneID:532978 KEGG:bta:532978
InParanoid:A7MBI4 NextBio:20875863 Uniprot:A7MBI4
Length = 744
Score = 264 (98.0 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 60/181 (33%), Positives = 102/181 (56%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
Y+ N PL+ V + HPVE Y +++ E+ +R + +IH E +GD+++FL +++I
Sbjct: 228 YYGNVPLIQVKNK-HPVEAVYLSGAQKESFESILRLIFEIHHSGE-KGDIVVFLACEQDI 285
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGI-GRKVVVST 133
E+A + + +E NL P+ GEL +PLY P + +F+ + + R+VV++
Sbjct: 286 EKAYEIVCQEGSNLNPDLGELVVVPLY----PKEKCALFKPNDETEKRCPVYQRRVVLTA 341
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
+ E+ + + V FVID G ++KVYNPRIR +SL+ PIS++ + GK
Sbjct: 342 SSGESLICSNTVKFVIDVGVERRKVYNPRIRADSLVTQPISQSQAETRKQILSASPSGKL 401
Query: 194 F 194
F
Sbjct: 402 F 402
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 24/53 (45%), Positives = 37/53 (69%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
VV++ + E+ + + V FVID G ++KVYNPRIR +SL+ PIS++ A+ R
Sbjct: 337 VVLTASSGESLICSNTVKFVIDVGVERRKVYNPRIRADSLVTQPISQSQAETR 389
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 262 (97.3 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 60/181 (33%), Positives = 101/181 (55%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
Y+ + P++ V + HPVE+ Y ++D E+ IR + +IH E +GDV++FL +++I
Sbjct: 228 YYGDVPVIEVRNK-HPVEVVYLSGAQKDSFESVIRLIFEIHRSGE-KGDVVVFLACEQDI 285
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGI-GRKVVVST 133
E+ + + +E NL P+ G+L IPLY P + +F + + R+VV++T
Sbjct: 286 EKTYELVCQEGSNLNPDVGDLVVIPLY----PKEKCSLFRPVDETEKRCQVYQRRVVLTT 341
Query: 134 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
+ E+ + V FVID G +++VYNPRIR SL++ PIS++ + GK
Sbjct: 342 SCGESLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKL 401
Query: 194 F 194
F
Sbjct: 402 F 402
Score = 116 (45.9 bits), Expect = 0.00055, P = 0.00055
Identities = 24/53 (45%), Positives = 37/53 (69%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
VV++T+ E+ + V FVID G +++VYNPRIR SL++ PIS++ A+ R
Sbjct: 337 VVLTTSCGESLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIR 389
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 264 (98.0 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 70/201 (34%), Positives = 106/201 (52%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAA--------IRTVVQIHM 56
AT L YF++AP++ VPGR P+++ Y P P + + + +R + I
Sbjct: 312 ATINIKLFSSYFNDAPVLQVPGRLFPIQVIYQPIPPEEQVSRSEKLDPRPYLRVLQGIDQ 371
Query: 57 C--EEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFE 114
+E GD+LLFL+G EI I++ +PL+STL Q ++F+
Sbjct: 372 RYPQEERGDLLLFLSGVAEIST----IQEACQTYATHTQRWIVLPLHSTLSLAQQDKVFD 427
Query: 115 AAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPIS 174
AP P G+ RK ++STNIAETS+TIDGV FV+D G K+ ++P+ +++ L IS
Sbjct: 428 IAP---P--GV-RKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWIS 481
Query: 175 KASXXXXXXXXXXTRPGKCFR 195
+AS T PG C+R
Sbjct: 482 RASSEQRKGRAGRTGPGVCYR 502
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
++STNIAETS+TIDGV FV+D G K+ ++P+ +++ L IS+AS++QR
Sbjct: 437 IISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQR 488
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 225 (84.3 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 58/155 (37%), Positives = 89/155 (57%)
Query: 42 DYLEAAIRTVVQIHMCE-EVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPL 100
D +EA I H+C E G +L+FLTG +EI + ++I ++N ++ + +PL
Sbjct: 488 DLVEATIE-----HICRLEGGGAILVFLTGWDEISKLLEKIN--MNNFLGDSSKFLVLPL 540
Query: 101 YSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYN 160
+ ++P Q+ IF+ P NK RK+V++TNIAE+S+TID VV+V+D G AK+ Y+
Sbjct: 541 HGSMPTVNQREIFDRPPPNK------RKIVLATNIAESSITIDDVVYVVDCGKAKETSYD 594
Query: 161 PRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
+V LL S ISKAS + G C+R
Sbjct: 595 ALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYR 629
Score = 133 (51.9 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 30/53 (56%), Positives = 40/53 (75%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+V++TNIAE+S+TID VV+V+D G AK+ Y+ +V LL S ISKASA QR
Sbjct: 563 IVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQR 615
Score = 65 (27.9 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPV-EIF 34
AT + YF N+P M++PG T PV E+F
Sbjct: 385 ATINADMFSTYFGNSPTMHIPGFTFPVAELF 415
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 263 (97.6 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 74/201 (36%), Positives = 103/201 (51%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTP---EPERDYLEAA-----IRTVVQIHM 56
AT L YF AP++ VPGR P+ + Y P EP LE IR + I
Sbjct: 312 ATVNTSLFSAYFGQAPVVQVPGRLFPITVVYQPQEAEPTASTLEKLDPRPFIRVLEAIDS 371
Query: 57 C--EEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFE 114
E GD+L+FL+G EI + + +G +PL+STL Q ++F+
Sbjct: 372 KYPPEERGDLLVFLSGLAEIGAVLEAAQAH----ARRSGRWVVLPLHSTLSVAAQDKVFD 427
Query: 115 AAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPIS 174
AP P G+ RK ++STNIAETS+TIDG+ FV+D G K+ Y+P+ +++ L IS
Sbjct: 428 VAP---P--GV-RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWIS 481
Query: 175 KASXXXXXXXXXXTRPGKCFR 195
+AS T PG CFR
Sbjct: 482 QASAEQRKGRAGRTGPGVCFR 502
Score = 134 (52.2 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
++STNIAETS+TIDG+ FV+D G K+ Y+P+ +++ L IS+ASA+QR
Sbjct: 437 ILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQR 488
Score = 51 (23.0 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 91 EAGELK-CIPLYSTLPPNLQQR 111
EAG L+ CIP + LPP R
Sbjct: 82 EAGRLRHCIPALADLPPTYDPR 103
Score = 36 (17.7 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 85 IDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGR-KVVVSTNIAE-TSLTI 142
+ L P +LK I + +T+ +L F AP + G + VV AE T+ T+
Sbjct: 295 LQRLLPRRPDLKVILMSATVNTSLFSAYFGQAPVVQVPGRLFPITVVYQPQEAEPTASTL 354
Query: 143 D 143
+
Sbjct: 355 E 355
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 260 (96.6 bits), Expect = 5.8e-21, P = 5.8e-21
Identities = 62/187 (33%), Positives = 104/187 (55%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTP-----EPERDYLEAAIRTVVQIHMCEEVEGDVLLFL 68
++F+NAP++ V GRT+PVE Y P E + D +E V ++ + E + GD+L+F+
Sbjct: 238 KHFNNAPIIEVSGRTYPVETRYRPLVQDTEADLDQIEGIFAAVDEL-VAEGL-GDILIFM 295
Query: 69 TGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRK 128
G+ EI + +++ + + + +PLY+ L Q ++F + GR+
Sbjct: 296 NGEREIRDTAEQLNRR------NYRDTEILPLYARLSYGEQSKVFSSHT--------GRR 341
Query: 129 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXT 188
+V++TN+AETSLT+ G+ +VIDPG A+ Y+ R +V+ L + PIS+AS
Sbjct: 342 IVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRQGRCGRV 401
Query: 189 RPGKCFR 195
PG C R
Sbjct: 402 GPGICIR 408
Score = 144 (55.7 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+V++TN+AETSLT+ G+ +VIDPG A+ Y+ R +V+ L + PIS+ASA QR
Sbjct: 342 IVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 394
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 260 (96.6 bits), Expect = 5.8e-21, P = 5.8e-21
Identities = 62/187 (33%), Positives = 104/187 (55%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTP-----EPERDYLEAAIRTVVQIHMCEEVEGDVLLFL 68
++F+NAP++ V GRT+PVE Y P E + D +E V ++ + E + GD+L+F+
Sbjct: 238 KHFNNAPIIEVSGRTYPVETRYRPLVQDTEADLDQIEGIFAAVDEL-VAEGL-GDILIFM 295
Query: 69 TGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRK 128
G+ EI + +++ + + + +PLY+ L Q ++F + GR+
Sbjct: 296 NGEREIRDTAEQLNRR------NYRDTEILPLYARLSYGEQSKVFSSHT--------GRR 341
Query: 129 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXT 188
+V++TN+AETSLT+ G+ +VIDPG A+ Y+ R +V+ L + PIS+AS
Sbjct: 342 IVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRQGRCGRV 401
Query: 189 RPGKCFR 195
PG C R
Sbjct: 402 GPGICIR 408
Score = 144 (55.7 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+V++TN+AETSLT+ G+ +VIDPG A+ Y+ R +V+ L + PIS+ASA QR
Sbjct: 342 IVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 394
>UNIPROTKB|F1SDM5 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
OMA:LACEQDI EMBL:CT841550 Ensembl:ENSSSCT00000011756 Uniprot:F1SDM5
Length = 742
Score = 256 (95.2 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 63/182 (34%), Positives = 104/182 (57%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEI 74
Y+ N PL+ V + PVE+ Y +++ LEA +R + +IH E EGD+++FL +++I
Sbjct: 228 YYGNVPLIEVTSK-RPVEVVYLSGAQKEALEAVLRLIFEIHHSGE-EGDIVVFLACEQDI 285
Query: 75 EEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAP-ANKPNGGIGRKVVVST 133
E+A + + +E NL P+ GEL +PLY P + +F+ A K R+VV++
Sbjct: 286 EKAYEIVCQEGTNLNPDLGELVVVPLY----PKEKCALFKPNDEAEKRCQVYQRRVVLTA 341
Query: 134 NIAETSLTIDGVVFVIDPGFAKQK-VYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGK 192
+ E+ + + V FVID G ++K VY+PRIR +SL++ PIS++ + GK
Sbjct: 342 SSGESLIWSNTVRFVIDVGVERRKKVYSPRIRADSLVLQPISQSQAEMRKQVLGSSSSGK 401
Query: 193 CF 194
F
Sbjct: 402 LF 403
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 254 (94.5 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 72/201 (35%), Positives = 101/201 (50%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTP---EPERDYLEAA-----IRTVVQI-H 55
AT L YF NAP++ VPGR P+ + Y P EP E +R + I H
Sbjct: 312 ATINISLFSSYFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESIDH 371
Query: 56 MCE-EVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFE 114
E GD+L+FL+G EI + + +PL+S L Q ++F+
Sbjct: 372 KYPPEERGDLLVFLSGMAEISA----VLEAAQTYASHTQRWVVLPLHSALSVADQDKVFD 427
Query: 115 AAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPIS 174
AP P G+ RK ++STNIAETS+TIDG+ FV+D G K+ Y+P+ +++ L IS
Sbjct: 428 VAP---P--GV-RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWIS 481
Query: 175 KASXXXXXXXXXXTRPGKCFR 195
+AS T PG CFR
Sbjct: 482 QASAEQRKGRAGRTGPGVCFR 502
Score = 134 (52.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
++STNIAETS+TIDG+ FV+D G K+ Y+P+ +++ L IS+ASA+QR
Sbjct: 437 ILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQR 488
Score = 40 (19.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 157 KVYNPRIRVESLLVSPISKAS 177
+ Y+PR R+ ++ P ++ S
Sbjct: 98 RTYDPRYRINLSVLGPATRGS 118
Score = 37 (18.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 91 EAGELK-CIPLYSTLP----PNLQQRIFEAAPANKPNGGIGRKVVVSTNIAE 137
+ G+ K IP + LP P + + PA + + G+GR + +AE
Sbjct: 82 DPGQPKHSIPALADLPRTYDPRYRINLSVLGPATRGSQGLGRHLPAE-RVAE 132
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 254 (94.5 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 71/190 (37%), Positives = 98/190 (51%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTP-EPERDYLEAAIRTVVQ--IHMCEEV-----EGDVL 65
QYF + ++ V GR PVEI Y+P + E + + I + V + M E+ EG +L
Sbjct: 469 QYFFSCGILLVNGRNFPVEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTIL 528
Query: 66 LFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGI 125
FLT Q E+E AC+R + P A L PL+ L Q R+F+ P
Sbjct: 529 AFLTSQAEVEWACERF------ITPSAIAL---PLHGKLSFEEQFRVFQNHPGR------ 573
Query: 126 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXX 185
RKV+ +TNIAETSLTI GV +VID G K+ Y PR + L V +S++S
Sbjct: 574 -RKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRA 632
Query: 186 XXTRPGKCFR 195
T PG+C+R
Sbjct: 633 GRTEPGRCYR 642
Score = 137 (53.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+ +TNIAETSLTI GV +VID G K+ Y PR + L V +S++SA+QRA
Sbjct: 576 VIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRA 629
>UNIPROTKB|F1NH89 [details] [associations]
symbol:LOC768812 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 OMA:LACEQDI EMBL:AADN02057061
EMBL:AADN02057062 IPI:IPI00683398 Ensembl:ENSGALT00000023318
Uniprot:F1NH89
Length = 764
Score = 248 (92.4 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 60/188 (31%), Positives = 104/188 (55%)
Query: 13 RQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQE 72
+ + + PL+ V H E+ YT +D+ +A+R + ++H +E +GD+++FL ++
Sbjct: 236 QDFCGSVPLIRVENE-HQAEVVYTCSMPKDHFLSALRLLFELHHTKE-KGDIVIFLACEQ 293
Query: 73 EIEEACKRIKKEIDNLGPEAGELKCIPLYST----LP-PNL-QQRIFEAAPANKPNGGIG 126
+I++A + I++E N P+ GEL +PLY T +P PN +Q+ ++
Sbjct: 294 DIDKAYQMIRQEQSNSNPDLGELIPVPLYPTRNDLIPKPNQDKQKCYQK---------YR 344
Query: 127 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXX 186
RKV+++T+ + + I + FVID G ++KVYNPRIR +S+ PISKA
Sbjct: 345 RKVLLTTSSGGSLIRIKNITFVIDVGVERRKVYNPRIRADSVTTQPISKAQAEMHKQILS 404
Query: 187 XTRPGKCF 194
+ GK F
Sbjct: 405 TSPSGKLF 412
Score = 123 (48.4 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 192 KCF---RYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQ 248
KC+ R V+++T+ + + I + FVID G ++KVYNPRIR +S+ PISKA A+
Sbjct: 338 KCYQKYRRKVLLTTSSGGSLIRIKNITFVIDVGVERRKVYNPRIRADSVTTQPISKAQAE 397
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 247 (92.0 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 71/201 (35%), Positives = 100/201 (49%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTP---EPERDYLEAA-----IRTVVQIH- 55
AT L YF NAP++ VPGR P+ + Y P EP E +R + I
Sbjct: 312 ATINISLFSSYFGNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLEAIDN 371
Query: 56 -MCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFE 114
E GD+L+FL+G EI + + +PL+S L Q ++F+
Sbjct: 372 KYPPEERGDLLVFLSGMAEISA----VLEPAQAYASHTQRWVVLPLHSALSVADQDKVFD 427
Query: 115 AAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPIS 174
AP P G+ RK ++STNIAETS+TIDG+ FV+D G K+ Y+P+ +++ L IS
Sbjct: 428 VAP---P--GV-RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWIS 481
Query: 175 KASXXXXXXXXXXTRPGKCFR 195
+AS T PG CFR
Sbjct: 482 QASAEQRKGRAGRTGPGVCFR 502
Score = 134 (52.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
++STNIAETS+TIDG+ FV+D G K+ Y+P+ +++ L IS+ASA+QR
Sbjct: 437 ILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQR 488
Score = 36 (17.7 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 157 KVYNPRIRVESLLVSPISKAS 177
+ Y+PR R+ ++ P ++ S
Sbjct: 98 RAYDPRYRINLSVLGPDARDS 118
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 205 (77.2 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 51/138 (36%), Positives = 76/138 (55%)
Query: 57 CEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAA 116
CEE G +L+FL G EI R+ G L +PL+S++ Q+++F
Sbjct: 880 CEE--GAILVFLPGMSEINMLLNRLAASYRFRGASGDWL--LPLHSSIASTEQKKVFL-- 933
Query: 117 PANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKA 176
+P GI RKV+++TNIAETS+TI+ VV+VID G K+ YNP ++ S++ +SKA
Sbjct: 934 ---RPPKGI-RKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKA 989
Query: 177 SXXXXXXXXXXTRPGKCF 194
+ +PG CF
Sbjct: 990 NARQRMGRAGRVKPGHCF 1007
Score = 144 (55.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 189 RPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQ 248
RP K R V+++TNIAETS+TI+ VV+VID G K+ YNP ++ S++ +SKA+A+
Sbjct: 934 RPPKGIRK-VIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANAR 992
Query: 249 QR 250
QR
Sbjct: 993 QR 994
Score = 68 (29.0 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEP-ERD-YLEAA 47
AT H +YF P++ GRTHPV ++ + ER YL A+
Sbjct: 761 ATVDAHQFSRYFGQCPIITAQGRTHPVTTYFLEDIYERTKYLLAS 805
Score = 41 (19.5 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 69 TGQEEIEEACKRIKKEIDNLGPEAGELK 96
+GQ + A ++K+E++ LGP L+
Sbjct: 245 SGQSQAGLAICKLKEEMNALGPSEAILE 272
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 242 (90.2 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 70/201 (34%), Positives = 101/201 (50%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTP---EP---ERDYLEAA--IRTVVQIH- 55
AT L YF AP++ VPGR P+ + Y P EP + + L+ +R + I
Sbjct: 311 ATINISLFSSYFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDN 370
Query: 56 -MCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFE 114
E GD+L+FL+G EI + + +PL+S L Q ++F+
Sbjct: 371 KYPPEERGDLLVFLSGMAEISS----VLEAAQTYASRTQRWVVLPLHSALSVADQDKVFD 426
Query: 115 AAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPIS 174
AP P G+ RK ++STNIAETS+TIDG+ FV+D G K+ Y+P+ ++ L IS
Sbjct: 427 VAP---P--GV-RKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWIS 480
Query: 175 KASXXXXXXXXXXTRPGKCFR 195
+AS T PG CFR
Sbjct: 481 QASAEQRKGRAGRTGPGVCFR 501
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 36/90 (40%), Positives = 51/90 (56%)
Query: 164 RVESLLVSPISKA-SXXXXXXXXXXTRPG--KCFRYIVVVSTNIAETSLTIDGVVFVIDP 220
R + +V P+ A S PG KC ++STNIAETS+TIDG+ FV+D
Sbjct: 403 RTQRWVVLPLHSALSVADQDKVFDVAPPGVRKC-----ILSTNIAETSVTIDGIRFVVDS 457
Query: 221 GFAKQKVYNPRIRVESLLVSPISKASAQQR 250
G K+ Y+P+ ++ L IS+ASA+QR
Sbjct: 458 GKVKEMGYDPQAKLHRLQEFWISQASAEQR 487
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 242 (90.2 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 70/201 (34%), Positives = 101/201 (50%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTP---EP---ERDYLEAA--IRTVVQIH- 55
AT L YF AP++ VPGR P+ + Y P EP + + L+ +R + I
Sbjct: 316 ATINISLFSSYFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDN 375
Query: 56 -MCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFE 114
E GD+L+FL+G EI + + +PL+S L Q ++F+
Sbjct: 376 KYPPEERGDLLVFLSGMAEISS----VLEAAQTYASRTQRWVVLPLHSALSVADQDKVFD 431
Query: 115 AAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPIS 174
AP P G+ RK ++STNIAETS+TIDG+ FV+D G K+ Y+P+ ++ L IS
Sbjct: 432 VAP---P--GV-RKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWIS 485
Query: 175 KASXXXXXXXXXXTRPGKCFR 195
+AS T PG CFR
Sbjct: 486 QASAEQRKGRAGRTGPGVCFR 506
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/90 (40%), Positives = 51/90 (56%)
Query: 164 RVESLLVSPISKA-SXXXXXXXXXXTRPG--KCFRYIVVVSTNIAETSLTIDGVVFVIDP 220
R + +V P+ A S PG KC ++STNIAETS+TIDG+ FV+D
Sbjct: 408 RTQRWVVLPLHSALSVADQDKVFDVAPPGVRKC-----ILSTNIAETSVTIDGIRFVVDS 462
Query: 221 GFAKQKVYNPRIRVESLLVSPISKASAQQR 250
G K+ Y+P+ ++ L IS+ASA+QR
Sbjct: 463 GKVKEMGYDPQAKLHRLQEFWISQASAEQR 492
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 243 (90.6 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 70/199 (35%), Positives = 98/199 (49%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPE-PERDYLEAAIRTVVQ--IHMCEEV- 60
AT + QY + +++V GR PVEI Y+P E + + I + + M E+
Sbjct: 457 ATADANQLSQYLFDCGILHVNGRNFPVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIH 516
Query: 61 ----EGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAA 116
EG +L FLT Q E+E AC+R + P A L PL+ L Q +F+
Sbjct: 517 KTEKEGTILAFLTSQAEVEWACERF------VAPSAIAL---PLHGKLSFEEQFMVFQNY 567
Query: 117 PANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKA 176
P RKV+ +TNIAETSLTI GV +VID G K+ Y PR + L V +S++
Sbjct: 568 PGR-------RKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQS 620
Query: 177 SXXXXXXXXXXTRPGKCFR 195
S T PG+C+R
Sbjct: 621 SARQRAGRAGRTEPGRCYR 639
Score = 138 (53.6 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+ +TNIAETSLTI GV +VID G K+ Y PR + L V +S++SA+QRA
Sbjct: 573 VIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRA 626
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 237 (88.5 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 68/201 (33%), Positives = 104/201 (51%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEP------ERDYLEAA--IRTVVQIH- 55
AT L YF +AP++ VPGR P+ + Y P+ + + L+ +R + I
Sbjct: 314 ATINISLFSSYFSHAPVVQVPGRLFPITVVYQPQEADQTASKSEKLDPRPFLRVLEAIDN 373
Query: 56 -MCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFE 114
E GD+L+FL+G EI + +L +PL+S L + Q ++F+
Sbjct: 374 KYPPEERGDLLVFLSGMAEITTVLDAAQAYA-SL---TQRWVVLPLHSALSVSDQDKVFD 429
Query: 115 AAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPIS 174
APA G+ RK ++STNIAETS+TIDG+ FV+D G K+ Y+P+ +++ L IS
Sbjct: 430 VAPA-----GV-RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWIS 483
Query: 175 KASXXXXXXXXXXTRPGKCFR 195
+AS T PG C+R
Sbjct: 484 QASAEQRKGRAGRTGPGVCYR 504
Score = 134 (52.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
++STNIAETS+TIDG+ FV+D G K+ Y+P+ +++ L IS+ASA+QR
Sbjct: 439 ILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQR 490
Score = 37 (18.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 159 YNPRIRVESLLVSP 172
Y+PR R+ ++SP
Sbjct: 102 YDPRYRINLSILSP 115
Score = 37 (18.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 85 IDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAP 117
+ L P+ +LK I + +T+ +L F AP
Sbjct: 297 LQRLLPQRPDLKVILMSATINISLFSSYFSHAP 329
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 181 (68.8 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 51/135 (37%), Positives = 74/135 (54%)
Query: 62 GDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCI--PLYSTLPPNLQQRIFEAAPAN 119
G VL+FL G EI+ ++++ L +C+ PL+S+L QQ +F PA
Sbjct: 841 GAVLIFLPGLAEIKMLYEQLQSNA--LFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPA- 897
Query: 120 KPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXX 179
G I K+++STNIAETS+TID VV+VID G K+K Y+P +ESL + +S+A+
Sbjct: 898 ---GVI--KIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSRANAL 952
Query: 180 XXXXXXXXTRPGKCF 194
G CF
Sbjct: 953 QRKGRAGRVASGVCF 967
Score = 139 (54.0 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 39/116 (33%), Positives = 62/116 (53%)
Query: 144 GVVFVIDPGFAKQKVYNPRIRVESL---------LVSPISKASXXXXXXXXXXTRPGKCF 194
G V + PG A+ K+ +++ +L +V P+ + P
Sbjct: 841 GAVLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVI 900
Query: 195 RYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+ +++STNIAETS+TID VV+VID G K+K Y+P +ESL + +S+A+A QR
Sbjct: 901 K--IIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSRANALQR 954
Score = 85 (35.0 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFY 35
AT L QYF + P++N+PGRT PV+ F+
Sbjct: 694 ATLNAELFSQYFHSCPIINIPGRTFPVDQFF 724
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 202 (76.2 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 52/138 (37%), Positives = 78/138 (56%)
Query: 57 CEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAA 116
CEE G +L+FL G EI + GP A L +PL+S++ + Q+++F
Sbjct: 913 CEE--GAILIFLPGVAEIYMLLDMLAASYRFRGPAADWL--LPLHSSIASSEQRKVFL-- 966
Query: 117 PANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKA 176
+P G+ RKV+ +TNIAETS+TID VV+VID G K+ YNP+ ++ S++ IS+A
Sbjct: 967 ---RPPKGL-RKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQA 1022
Query: 177 SXXXXXXXXXXTRPGKCF 194
+ +PG CF
Sbjct: 1023 NARQRTGRAGRVKPGICF 1040
Score = 143 (55.4 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 32/62 (51%), Positives = 45/62 (72%)
Query: 189 RPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQ 248
RP K R V+ +TNIAETS+TID VV+VID G K+ YNP+ ++ S++ IS+A+A+
Sbjct: 967 RPPKGLRK-VIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANAR 1025
Query: 249 QR 250
QR
Sbjct: 1026 QR 1027
Score = 63 (27.2 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPE 38
AT L +YF + P++ GRTHPV + E
Sbjct: 781 ATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEE 814
Score = 47 (21.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 70 GQEEIEEACKRIKKEIDNLG 89
GQE+ A +++K+EI +LG
Sbjct: 250 GQEQAGLAIRKLKQEISDLG 269
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 229 (85.7 bits), Expect = 4.3e-18, P = 4.3e-18
Identities = 65/200 (32%), Positives = 97/200 (48%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPE--PERDYLEAAIRTVVQIHMC--EEV 60
AT + +YF+ P++ + +PV + + P P + + A +++ +C E V
Sbjct: 160 ATINTAMFSRYFNECPVIKIDAVAYPVTVIFDPPDTPASTHTKEAEAALLEKIVCIVERV 219
Query: 61 -----EGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEA 115
+G +L+FL G+ I+ R+ E +L +PLY L Q+++F
Sbjct: 220 IASRDKGAILIFLPGERSIKNCITRLSHE-----RWFRKLFLLPLYGRLSKEEQEQVFNR 274
Query: 116 APANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISK 175
AP K RKVV++TNIAETS+TID V VID G K YNP SL +PIS+
Sbjct: 275 APFGK------RKVVIATNIAETSITIDDVTTVIDSGLVKLNSYNPLSYTASLDETPISQ 328
Query: 176 ASXXXXXXXXXXTRPGKCFR 195
AS R G C+R
Sbjct: 329 ASCNQRRGRAGRVRAGTCYR 348
Score = 133 (51.9 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 30/53 (56%), Positives = 35/53 (66%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
VV++TNIAETS+TID V VID G K YNP SL +PIS+AS QR
Sbjct: 282 VVIATNIAETSITIDDVTTVIDSGLVKLNSYNPLSYTASLDETPISQASCNQR 334
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 170 (64.9 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 41/107 (38%), Positives = 58/107 (54%)
Query: 90 PEAG-ELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFV 148
P+A L +PLYS L P Q ++F+ P R VV+TN+AETSLTI G+ +V
Sbjct: 369 PDASLPLHVLPLYSLLAPEKQAQVFKPPPEGT------RLCVVATNVAETSLTIPGIKYV 422
Query: 149 IDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
+D G K++ Y+ V S V+ +S+AS T PG C+R
Sbjct: 423 VDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYR 469
Score = 125 (49.1 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 27/55 (49%), Positives = 39/55 (70%)
Query: 197 IVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+ VV+TN+AETSLTI G+ +V+D G K++ Y+ V S V+ +S+ASA QRA
Sbjct: 402 LCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRA 456
Score = 106 (42.4 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 20 PLMNVPGRTHPVEIFYTPE-PERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEAC 78
P++ V R PV + + P DY R V +IH G +L+FLTGQ E+ C
Sbjct: 215 PVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPA-GGILVFLTGQAEVHALC 273
Query: 79 KRIKK 83
+R++K
Sbjct: 274 RRLRK 278
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 190 (71.9 bits), Expect = 5.9e-18, Sum P(2) = 5.9e-18
Identities = 52/169 (30%), Positives = 88/169 (52%)
Query: 26 GRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKKEI 85
G +E+ + + D + A IR +V EE +G +L+FL G + I + ++
Sbjct: 438 GTIDALEMMDDDKVDLDLIAALIRHIV----LEEEDGAILVFLPGWDNISTLHDLLMSQV 493
Query: 86 DNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGV 145
++ IPL+S +P Q ++F+ P P G+ RK+V++TNIAETS+TID V
Sbjct: 494 MF---KSDRFIIIPLHSLMPTVNQTQVFKKTP---P--GV-RKIVIATNIAETSITIDDV 544
Query: 146 VFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
VFVID G K+ ++ + + ++ +SKA+ +PG C+
Sbjct: 545 VFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCY 593
Score = 125 (49.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+V++TNIAETS+TID VVFVID G K+ ++ + + ++ +SKA+A+QR
Sbjct: 528 IVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQR 580
Score = 67 (28.6 bits), Expect = 5.9e-18, Sum P(2) = 5.9e-18
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPV 31
AT +YFDN P++++PG T PV
Sbjct: 348 ATLNAEKFSEYFDNCPMIHIPGFTFPV 374
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 170 (64.9 bits), Expect = 9.1e-18, Sum P(2) = 9.1e-18
Identities = 41/107 (38%), Positives = 58/107 (54%)
Query: 90 PEAG-ELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFV 148
P+A L +PLYS L P Q ++F+ P R VV+TN+AETSLTI G+ +V
Sbjct: 582 PDASLPLHVLPLYSLLAPEKQAQVFKPPPEGT------RLCVVATNVAETSLTIPGIKYV 635
Query: 149 IDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
+D G K++ Y+ V S V+ +S+AS T PG C+R
Sbjct: 636 VDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYR 682
Score = 125 (49.1 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 27/55 (49%), Positives = 39/55 (70%)
Query: 197 IVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+ VV+TN+AETSLTI G+ +V+D G K++ Y+ V S V+ +S+ASA QRA
Sbjct: 615 LCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRA 669
Score = 106 (42.4 bits), Expect = 9.1e-18, Sum P(2) = 9.1e-18
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 20 PLMNVPGRTHPVEIFYTPE-PERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEAC 78
P++ V R PV + + P DY R V +IH G +L+FLTGQ E+ C
Sbjct: 428 PVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPA-GGILVFLTGQAEVHALC 486
Query: 79 KRIKK 83
+R++K
Sbjct: 487 RRLRK 491
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 228 (85.3 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 64/190 (33%), Positives = 96/190 (50%)
Query: 19 APLMNVPGRTHPVEIFYTPEPER-------------DYLEAAIRTVVQIHMCEEVEGDVL 65
AP++ V GRT PVE+ Y P +R D + + V ++ C GD+L
Sbjct: 271 APIIEVSGRTFPVEMRYRPLNDRAVIDDDDQSPQEVDIISGILSAVDELSDCGN--GDIL 328
Query: 66 LFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGI 125
+FL G+ EI + + K NL +PLY+ L + Q +IF KP+ G
Sbjct: 329 VFLNGEREIRDTAAALVKA--NLR----HTNVLPLYARLTVSEQNQIF------KPHSG- 375
Query: 126 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXX 185
R +V++TN+AETSLT+ G+ +VIDPG A+ Y+ R +V+ L + P+S+AS
Sbjct: 376 -RNIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRSGRC 434
Query: 186 XXTRPGKCFR 195
G C R
Sbjct: 435 GRVSEGICIR 444
Score = 145 (56.1 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 27/54 (50%), Positives = 42/54 (77%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+V++TN+AETSLT+ G+ +VIDPG A+ Y+ R +V+ L + P+S+ASA QR+
Sbjct: 378 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRS 431
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 169 (64.5 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 40/107 (37%), Positives = 58/107 (54%)
Query: 90 PEAG-ELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFV 148
P+A L +PLYS L P Q ++F+ P R V++TN+AETSLTI G+ +V
Sbjct: 575 PDASLPLHVLPLYSLLAPEKQAQVFKPPPEGT------RLCVIATNVAETSLTIPGIKYV 628
Query: 149 IDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
+D G K++ Y+ V S V+ +S+AS T PG C+R
Sbjct: 629 VDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYR 675
Score = 124 (48.7 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 197 IVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+ V++TN+AETSLTI G+ +V+D G K++ Y+ V S V+ +S+ASA QRA
Sbjct: 608 LCVIATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRA 662
Score = 104 (41.7 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 20 PLMNVPGRTHPVEIFYTPE-PERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEAC 78
P++ V R PV + + P DY R V +IH G +L+FLTGQ E+ C
Sbjct: 424 PVIKVESRQFPVTVHFNKRTPLDDYSGECFRKVCKIHRMLPA-GGILVFLTGQAEVHALC 482
Query: 79 KRIKK 83
+R++K
Sbjct: 483 RRLRK 487
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 178 (67.7 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 52/156 (33%), Positives = 83/156 (53%)
Query: 42 DYLEAAIRTVVQ-IHMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCI-- 98
+ +EA + +V H G +L+FL G EI+ ++++ ++L +C+
Sbjct: 822 ELIEALLEWIVDGKHSYPPDPGAILVFLPGLAEIKMLYEQLQS--NSLFNNRRSNRCVIH 879
Query: 99 PLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKV 158
PL+S+L QQ +F KP G+ K+++STNIAETS+TID VV+VID G K+K
Sbjct: 880 PLHSSLSSEEQQAVFV-----KPPMGV-TKIIISTNIAETSITIDDVVYVIDSGKMKEKR 933
Query: 159 YNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
Y+ +ESL + +S+A+ G CF
Sbjct: 934 YDASKGMESLEDTFVSQANALQRKGRAGRVASGVCF 969
Score = 130 (50.8 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 40/116 (34%), Positives = 62/116 (53%)
Query: 144 GVVFVIDPGFAKQKVYNPRIRVESL---------LVSPISKASXXXXXXXXXXTRPGKCF 194
G + V PG A+ K+ +++ SL ++ P+ +S +P
Sbjct: 843 GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLH-SSLSSEEQQAVFVKPPMGV 901
Query: 195 RYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
I++ STNIAETS+TID VV+VID G K+K Y+ +ESL + +S+A+A QR
Sbjct: 902 TKIII-STNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQR 956
Score = 77 (32.2 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFY 35
AT L +YF++ P++ +PGRT PV+ F+
Sbjct: 694 ATLNAELFSEYFNSCPVITIPGRTFPVDQFF 724
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 186 (70.5 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 59/160 (36%), Positives = 84/160 (52%)
Query: 52 VQIHMC-EEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQ 110
V H+C +E G VL+FLTG ++I +IK LG + + + + ++ Q+
Sbjct: 529 VLCHICRKERPGAVLVFLTGWDDIRSLSDQIKAH-PLLG-DPNRVLLLMCHGSMATAEQR 586
Query: 111 RIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 170
IFE AP PN I RK+V++TN+AE S+TI+ VVFV+D G AK+ Y+ LL
Sbjct: 587 LIFERAP---PN--I-RKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLP 640
Query: 171 SPISKASXXXXXXXXXXTRPGKCFR-YIVVVSTNIAETSL 209
S IS+AS PG+C+ Y V AE L
Sbjct: 641 SWISQASARQRRGRAGRLFPGECYHLYPKCVYDAFAEYQL 680
Score = 120 (47.3 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+V++TN+AE S+TI+ VVFV+D G AK+ Y+ LL S IS+ASA+QR
Sbjct: 599 IVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQR 651
Score = 67 (28.6 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFY 35
AT L Y+ AP +++PG THPV+ +
Sbjct: 417 ATLNAELFSNYYGGAPTIHIPGFTHPVKAHF 447
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 169 (64.5 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 41/107 (38%), Positives = 58/107 (54%)
Query: 90 PEAG-ELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFV 148
P+A L +PLYS L P Q ++F+ P R VV+TN+AETSLTI G+ +V
Sbjct: 576 PDASLPLHVLPLYSLLAPEKQAQVFQPPPEGT------RLCVVATNVAETSLTIPGIKYV 629
Query: 149 IDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
+D G K++ Y+ V S V+ +S+AS T PG C+R
Sbjct: 630 VDCGKVKKRHYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYR 676
Score = 123 (48.4 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 27/55 (49%), Positives = 39/55 (70%)
Query: 197 IVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+ VV+TN+AETSLTI G+ +V+D G K++ Y+ V S V+ +S+ASA QRA
Sbjct: 609 LCVVATNVAETSLTIPGIKYVVDCGKVKKRHYDRVTGVSSFRVTWVSQASADQRA 663
Score = 103 (41.3 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 20 PLMNVPGRTHPVEIFYTPE-PERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEAC 78
P++ V R PV + + P DY R V +IH G +L+FLTGQ E+ C
Sbjct: 422 PVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPA-GGILVFLTGQAEVHALC 480
Query: 79 KRIKK 83
+R+++
Sbjct: 481 RRLRR 485
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 175 (66.7 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 47/135 (34%), Positives = 74/135 (54%)
Query: 62 GDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCI--PLYSTLPPNLQQRIFEAAPAN 119
G VL+FL G EI++ ++++ + + +C+ PL+S+L QQ +F
Sbjct: 891 GAVLVFLPGLAEIKQLYEQLQS--NRMFNNRRTNRCVVYPLHSSLSNEEQQAVF-----T 943
Query: 120 KPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXX 179
+P G+ K+++STNIAETS+TID VV+VID G K+K Y+ +ESL +S+A+
Sbjct: 944 RPQNGV-TKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWVSRANAL 1002
Query: 180 XXXXXXXXTRPGKCF 194
G CF
Sbjct: 1003 QRKGRAGRVASGVCF 1017
Score = 137 (53.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 46/117 (39%), Positives = 62/117 (52%)
Query: 144 GVVFVIDPGFA--KQ--------KVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
G V V PG A KQ +++N R R +V P+ +S TRP
Sbjct: 891 GAVLVFLPGLAEIKQLYEQLQSNRMFNNR-RTNRCVVYPLH-SSLSNEEQQAVFTRPQNG 948
Query: 194 FRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
I++ STNIAETS+TID VV+VID G K+K Y+ +ESL +S+A+A QR
Sbjct: 949 VTKIII-STNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWVSRANALQR 1004
Score = 87 (35.7 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFY 35
AT L QYF+N P +++PGRT PVE F+
Sbjct: 740 ATLNAELFSQYFNNCPCIHIPGRTFPVEQFF 770
Score = 47 (21.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 71 QEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRI 112
Q+E+ + ++ + G + E +CIP+ + NL++R+
Sbjct: 500 QKEVAQILSEDIDDVQDEGDDEDEEECIPVENESYVNLRKRM 541
>TIGR_CMR|GSU_1838 [details] [associations]
symbol:GSU_1838 "ATP-dependent helicase HrpB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
HOGENOM:HOG000244610 RefSeq:NP_952888.1 ProteinModelPortal:Q74C37
DNASU:2688652 GeneID:2688652 KEGG:gsu:GSU1838 PATRIC:22026533
ProtClustDB:CLSK828597 BioCyc:GSUL243231:GH27-1781-MONOMER
Uniprot:Q74C37
Length = 846
Score = 221 (82.9 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 60/178 (33%), Positives = 89/178 (50%)
Query: 18 NAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEA 77
+AP++ GR +PV + + P +R+ L +A+ V+I + E EGD+L FL G EI
Sbjct: 171 DAPVITSEGRNYPVALRHIPPNDRENLPSAVARAVRIAV-RECEGDILAFLPGVGEIRR- 228
Query: 78 CKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAE 137
C ++ + P +PLY LP Q+R P RKVV++T IAE
Sbjct: 229 CGQLLAD----DPPLHAPLVVPLYGDLPFVEQERAILPVPGR-------RKVVLATTIAE 277
Query: 138 TSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
TSLTI+GV V+D G ++ Y+P + L+ +S AS PG C+R
Sbjct: 278 TSLTIEGVRVVVDGGQTRRLRYDPASGLNRLVTERVSAASATQRAGRAGRLGPGTCYR 335
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 189 (71.6 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 60/215 (27%), Positives = 109/215 (50%)
Query: 36 TPEPERDYLEAAIRTVVQIHMCEEV-EGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGE 94
T +PE + ++ + +I C + +G +L+FL G EEI + +++ D + +
Sbjct: 551 TIKPEEVDVGLIVKLMKKI--CSDSKDGAILVFLPGWEEISKTKEKLLD--DRFFAHSAK 606
Query: 95 LKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFA 154
+ L+S +P Q+++F N+P G RK+V++TNIAE+++TID VV+VID G
Sbjct: 607 FIILCLHSRVPAEEQKKVF-----NRPPRGC-RKIVLATNIAESAVTIDDVVYVIDSGRM 660
Query: 155 KQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR-YIVVVSTNIAETSLTIDG 213
K+K Y+P V +L S +SKA+ + G C+ Y + + ++ E + +
Sbjct: 661 KEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVP-EV 719
Query: 214 VVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQ 248
+ +D + K+ +P V L + AQ
Sbjct: 720 MRMPVDELCLQVKMLDPNCNVNDFLQKLMDPPVAQ 754
Score = 141 (54.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 43/115 (37%), Positives = 62/115 (53%)
Query: 143 DGVVFVIDPGF-----AKQKVYNPRIRVESLLVSPISKASXX-XXXXXXXXTRPGKCFRY 196
DG + V PG+ K+K+ + R S + S RP + R
Sbjct: 575 DGAILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGCRK 634
Query: 197 IVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
IV+ +TNIAE+++TID VV+VID G K+K Y+P V +L S +SKA+A+QRA
Sbjct: 635 IVL-ATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRA 688
Score = 63 (27.2 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFY 35
+YF P++ VPG T+PV F+
Sbjct: 385 EYFGGCPVVRVPGFTYPVRTFF 406
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 183 (69.5 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 49/164 (29%), Positives = 88/164 (53%)
Query: 31 VEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGP 90
+E+ + + + + A IR +V EE +G +L+FL G + I + ++
Sbjct: 376 IEMMEDDKVDLNLIVALIRYIV----LEEEDGAILVFLPGWDNISTLHDLLMSQVMF--- 428
Query: 91 EAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVID 150
++ + IPL+S +P Q ++F+ P P G+ RK+V++TNIAETS+TID VV+VID
Sbjct: 429 KSDKFLIIPLHSLMPTVNQTQVFKRTP---P--GV-RKIVIATNIAETSITIDDVVYVID 482
Query: 151 PGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
G K+ ++ + + ++ +SKA+ +PG C+
Sbjct: 483 GGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCY 526
Score = 123 (48.4 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 37/115 (32%), Positives = 59/115 (51%)
Query: 143 DGVVFVIDPGFAKQKVYNPRI------RVESLLVSPI-SKASXXXXXXXXXXTRPGKCFR 195
DG + V PG+ + + + + L+ P+ S T PG R
Sbjct: 402 DGAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPG--VR 459
Query: 196 YIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
IV+ +TNIAETS+TID VV+VID G K+ ++ + + ++ +SKA+A+QR
Sbjct: 460 KIVI-ATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQR 513
Score = 60 (26.2 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPV 31
AT +YF N P++++PG T PV
Sbjct: 281 ATLNAEKFSEYFGNCPMIHIPGFTFPV 307
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 171 (65.3 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 45/129 (34%), Positives = 66/129 (51%)
Query: 67 FLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIG 126
F G ++ + +++ I + L C+PLYS L Q+R+F+ PA G+
Sbjct: 549 FENGDGDLSDG--KVENSIGAPPADCEPLYCLPLYSLLSMGKQRRVFDETPA-----GM- 600
Query: 127 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXX 186
R V+STN+AETSLTI GV +VID GF K+++Y+ V V IS+AS
Sbjct: 601 RLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAG 660
Query: 187 XTRPGKCFR 195
G +R
Sbjct: 661 RISAGHAYR 669
Score = 134 (52.2 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 197 IVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+ V+STN+AETSLTI GV +VID GF K+++Y+ V V IS+AS QRA
Sbjct: 602 LCVISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRA 656
Score = 94 (38.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 21 LMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVE-GDVLLFLTGQEEIEEACK 79
++ V R PV + + DY+ +A R +IH E + G +L+F+TGQ E+++
Sbjct: 412 VIKVDARQFPVSVHFEKRTPDDYIASAFRKTCRIH--ETLPPGAILVFVTGQHEVKQLIT 469
Query: 80 RIKK 83
++KK
Sbjct: 470 KLKK 473
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 183 (69.5 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 49/164 (29%), Positives = 88/164 (53%)
Query: 31 VEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGP 90
+E+ + + + + A IR +V EE +G +L+FL G + I + ++
Sbjct: 462 IEMMEDDKVDLNLIVALIRYIV----LEEEDGAILVFLPGWDNISTLHDLLMSQVMF--- 514
Query: 91 EAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVID 150
++ + IPL+S +P Q ++F+ P P G+ RK+V++TNIAETS+TID VV+VID
Sbjct: 515 KSDKFLIIPLHSLMPTVNQTQVFKRTP---P--GV-RKIVIATNIAETSITIDDVVYVID 568
Query: 151 PGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
G K+ ++ + + ++ +SKA+ +PG C+
Sbjct: 569 GGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCY 612
Score = 123 (48.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 37/115 (32%), Positives = 59/115 (51%)
Query: 143 DGVVFVIDPGFAKQKVYNPRI------RVESLLVSPI-SKASXXXXXXXXXXTRPGKCFR 195
DG + V PG+ + + + + L+ P+ S T PG R
Sbjct: 488 DGAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPG--VR 545
Query: 196 YIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
IV+ +TNIAETS+TID VV+VID G K+ ++ + + ++ +SKA+A+QR
Sbjct: 546 KIVI-ATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQR 599
Score = 60 (26.2 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPV 31
AT +YF N P++++PG T PV
Sbjct: 367 ATLNAEKFSEYFGNCPMIHIPGFTFPV 393
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 183 (69.5 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 50/164 (30%), Positives = 88/164 (53%)
Query: 31 VEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGP 90
VE+ + + + + A IR +V EE +G +L+FL G + I + ++
Sbjct: 464 VEMMDDEKVDLNLIAALIRYIV----LEEEDGAILVFLPGWDNISTLHDLLMSQVMF--- 516
Query: 91 EAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVID 150
++ + IPL+S +P Q ++F+ P P G+ RK+V++TNIAETS+TID VV+VID
Sbjct: 517 KSDKFIIIPLHSLMPTVNQTQVFKRTP---P--GV-RKIVIATNIAETSITIDDVVYVID 570
Query: 151 PGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
G K+ ++ + + ++ +SKA+ +PG C+
Sbjct: 571 GGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCY 614
Score = 121 (47.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 24/53 (45%), Positives = 39/53 (73%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+V++TNIAETS+TID VV+VID G K+ ++ + + ++ +SKA+A+QR
Sbjct: 549 IVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQR 601
Score = 60 (26.2 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPV 31
AT +YF N P++++PG T PV
Sbjct: 369 ATLNAEKFSEYFGNCPMIHIPGFTFPV 395
>MGI|MGI:2136388 [details] [associations]
symbol:Dqx1 "DEAQ RNA-dependent ATPase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=ISA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 MGI:MGI:2136388 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 GO:GO:0016887 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AF318278 EMBL:BC048936 EMBL:BC075680
IPI:IPI00125675 IPI:IPI00844713 RefSeq:NP_291084.1
UniGene:Mm.140332 ProteinModelPortal:Q924H9 SMR:Q924H9
PhosphoSite:Q924H9 PRIDE:Q924H9 Ensembl:ENSMUST00000077502
GeneID:93838 KEGG:mmu:93838 UCSC:uc009cmc.1 UCSC:uc009cmd.1
InParanoid:Q924H9 NextBio:351693 Bgee:Q924H9 CleanEx:MM_DQX1
Genevestigator:Q924H9 Uniprot:Q924H9
Length = 718
Score = 214 (80.4 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 55/183 (30%), Positives = 89/183 (48%)
Query: 15 YFDNAPLMNVPGRT--HPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQE 72
++ N+P++ VP P + Y D +EAA + V+++ EE GDVL++L +E
Sbjct: 212 FWGNSPIVRVPREPGGDPT-LAYKDTVPTDLVEAACQAVLELCQQEEAPGDVLVYLPSEE 270
Query: 73 EIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVS 132
EI C+ + E+ L + +PL+ +Q ++E + RK+VV+
Sbjct: 271 EISLCCESLSGEMGTLAVPGPPPRVLPLHPGCAQAIQT-VYEDTDVSV------RKIVVT 323
Query: 133 TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGK 192
+A+ S ++ + VID G + VYNPRIR ES ++ PISK PG
Sbjct: 324 HWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGS 383
Query: 193 CFR 195
C R
Sbjct: 384 CLR 386
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 182 (69.1 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 45/147 (30%), Positives = 81/147 (55%)
Query: 48 IRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPN 107
I +++ + EE +G +L+FL G + I + ++ ++ + IPL+S +P
Sbjct: 468 IAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF---KSDKFLIIPLHSLMPTV 524
Query: 108 LQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVES 167
Q ++F+ P P G+ RK+V++TNIAETS+TID VV+VID G K+ ++ + + +
Sbjct: 525 NQTQVFKKTP---P--GV-RKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIST 578
Query: 168 LLVSPISKASXXXXXXXXXXTRPGKCF 194
+ +SKA+ +PG C+
Sbjct: 579 MSAEWVSKANAKQRKGRAGRVQPGHCY 605
Score = 123 (48.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 37/115 (32%), Positives = 59/115 (51%)
Query: 143 DGVVFVIDPGFAKQKVYNPRI------RVESLLVSPI-SKASXXXXXXXXXXTRPGKCFR 195
DG + V PG+ + + + + L+ P+ S T PG R
Sbjct: 481 DGAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPG--VR 538
Query: 196 YIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
IV+ +TNIAETS+TID VV+VID G K+ ++ + + ++ +SKA+A+QR
Sbjct: 539 KIVI-ATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQR 592
Score = 60 (26.2 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPV 31
AT +YF N P++++PG T PV
Sbjct: 360 ATLNAEKFSEYFGNCPMIHIPGFTFPV 386
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 215 (80.7 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 69/208 (33%), Positives = 100/208 (48%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTP---------------EPERDYLEAAIR 49
AT L + YF+ AP++ VPGR P+++ + P +PE YL+ I
Sbjct: 223 ATINLDLFKGYFEGAPVVQVPGRLFPIDVRWHPIKQFIDQSDKKTHKIDPE-PYLK--IL 279
Query: 50 TVVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKK--EIDNLGPEAGELKCIPLYSTLPPN 107
++ GD L+FL G EI + +K E+ N G + + L+STL
Sbjct: 280 ELIDKQFPSTQRGDALIFLNGVAEISMVAEHLKNYAELTN-----GWI-ILMLHSTLSVE 333
Query: 108 LQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVES 167
Q ++F+ AP GI RK ++STN+AETS+TIDG+ FVID G + P +
Sbjct: 334 EQDKVFDQAPV-----GI-RKCILSTNVAETSVTIDGIRFVIDSGKVNLIKHEPGTGTQK 387
Query: 168 LLVSPISKASXXXXXXXXXXTRPGKCFR 195
L +SKAS T PG C+R
Sbjct: 388 LTEFWVSKASANQRKGRAGRTGPGICYR 415
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 181 (68.8 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 45/147 (30%), Positives = 80/147 (54%)
Query: 48 IRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPN 107
I +++ + EE +G +L+FL G + I + ++ ++ IPL+S +P
Sbjct: 467 IAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF---KSDRFLIIPLHSLMPTV 523
Query: 108 LQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVES 167
Q ++F+ P P G+ RK+V++TNIAETS+TID VV+VID G K+ ++ + + +
Sbjct: 524 NQTQVFKKTP---P--GV-RKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIST 577
Query: 168 LLVSPISKASXXXXXXXXXXTRPGKCF 194
+ +SKA+ +PG C+
Sbjct: 578 MSAEWVSKANAKQRKGRAGRVQPGHCY 604
Score = 122 (48.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 37/115 (32%), Positives = 59/115 (51%)
Query: 143 DGVVFVIDPGFAKQKVYNPRI------RVESLLVSPI-SKASXXXXXXXXXXTRPGKCFR 195
DG + V PG+ + + + + L+ P+ S T PG R
Sbjct: 480 DGAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKKTPPG--VR 537
Query: 196 YIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
IV+ +TNIAETS+TID VV+VID G K+ ++ + + ++ +SKA+A+QR
Sbjct: 538 KIVI-ATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQR 591
Score = 60 (26.2 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPV 31
AT +YF N P++++PG T PV
Sbjct: 359 ATLNAEKFSEYFGNCPMIHIPGFTFPV 385
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 184 (69.8 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 48/142 (33%), Positives = 74/142 (52%)
Query: 55 HMCE-EVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPE-AGELKCIPLYSTLPPNLQQRI 112
++CE E EG +L+FL G ++I + + K + G + PL+S + QQ +
Sbjct: 415 YICENEPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLMQSGEQQAV 474
Query: 113 FEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSP 172
F PA + RKV++ST IAETS+TID VV+VI+ G K Y+ ++SL
Sbjct: 475 FRRPPAGQ------RKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVW 528
Query: 173 ISKASXXXXXXXXXXTRPGKCF 194
++KA+ RPG C+
Sbjct: 529 VTKANTQQRRGRAGRVRPGICY 550
Score = 109 (43.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
V++ST IAETS+TID VV+VI+ G K Y+ ++SL ++KA+ QQR
Sbjct: 485 VIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQR 537
Score = 56 (24.8 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFY 35
AT R+ YF+N P+ + G PV++ Y
Sbjct: 311 ATVREQDFCDYFNNCPMFRIEGVMFPVKMLY 341
>UNIPROTKB|Q8EJ41 [details] [associations]
symbol:hrpB "ATP-dependent helicase HrpB" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 RefSeq:NP_716265.1 HSSP:P26664
ProteinModelPortal:Q8EJ41 GeneID:1168495 KEGG:son:SO_0632
PATRIC:23520950 ProtClustDB:CLSK905853 Uniprot:Q8EJ41
Length = 835
Score = 213 (80.0 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 58/180 (32%), Positives = 89/180 (49%)
Query: 19 APLMNVPGRTHPVEIFYTPEP-ERDYLEAAIRTVVQ--IHMCEEVEGDVLLFLTGQEEIE 75
A L+ GRT PVEI Y ++ +L+ RTV+ + + D+L+FL G+ EI
Sbjct: 171 AALLKSEGRTFPVEIIYRAVAGQQHWLDHLSRTVLDSAASITDSGPQDILVFLPGKAEIL 230
Query: 76 EACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNI 135
+ + + +D + PLY L Q R +A + + RK+V+STN+
Sbjct: 231 RVAQYLAERLDG-----SRVAICPLYGELSAQEQDRAIKADASGR------RKIVLSTNV 279
Query: 136 AETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
AE+SLTI+G+ VID G+ +Q +NP+ V L + IS+AS G C R
Sbjct: 280 AESSLTIEGIGLVIDSGYKRQASFNPKTGVTRLSLKRISQASATQRAGRAGRLAAGVCIR 339
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 28/54 (51%), Positives = 40/54 (74%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+V+STN+AE+SLTI+G+ VID G+ +Q +NP+ V L + IS+ASA QRA
Sbjct: 273 IVLSTNVAESSLTIEGIGLVIDSGYKRQASFNPKTGVTRLSLKRISQASATQRA 326
>TIGR_CMR|SO_0632 [details] [associations]
symbol:SO_0632 "ATP-dependent helicase HrpB" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 RefSeq:NP_716265.1 HSSP:P26664
ProteinModelPortal:Q8EJ41 GeneID:1168495 KEGG:son:SO_0632
PATRIC:23520950 ProtClustDB:CLSK905853 Uniprot:Q8EJ41
Length = 835
Score = 213 (80.0 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 58/180 (32%), Positives = 89/180 (49%)
Query: 19 APLMNVPGRTHPVEIFYTPEP-ERDYLEAAIRTVVQ--IHMCEEVEGDVLLFLTGQEEIE 75
A L+ GRT PVEI Y ++ +L+ RTV+ + + D+L+FL G+ EI
Sbjct: 171 AALLKSEGRTFPVEIIYRAVAGQQHWLDHLSRTVLDSAASITDSGPQDILVFLPGKAEIL 230
Query: 76 EACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNI 135
+ + + +D + PLY L Q R +A + + RK+V+STN+
Sbjct: 231 RVAQYLAERLDG-----SRVAICPLYGELSAQEQDRAIKADASGR------RKIVLSTNV 279
Query: 136 AETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
AE+SLTI+G+ VID G+ +Q +NP+ V L + IS+AS G C R
Sbjct: 280 AESSLTIEGIGLVIDSGYKRQASFNPKTGVTRLSLKRISQASATQRAGRAGRLAAGVCIR 339
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 28/54 (51%), Positives = 40/54 (74%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+V+STN+AE+SLTI+G+ VID G+ +Q +NP+ V L + IS+ASA QRA
Sbjct: 273 IVLSTNVAESSLTIEGIGLVIDSGYKRQASFNPKTGVTRLSLKRISQASATQRA 326
>UNIPROTKB|Q8TE96 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
EMBL:AC005041 HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AK074337 EMBL:AK092420 EMBL:BC075018
IPI:IPI00385794 IPI:IPI00843897 IPI:IPI00844595 RefSeq:NP_598376.2
UniGene:Hs.191705 ProteinModelPortal:Q8TE96 SMR:Q8TE96
STRING:Q8TE96 PhosphoSite:Q8TE96 DMDM:145558898 PaxDb:Q8TE96
PRIDE:Q8TE96 Ensembl:ENST00000393951 Ensembl:ENST00000404568
GeneID:165545 KEGG:hsa:165545 UCSC:uc010yrw.2 GeneCards:GC02M074745
H-InvDB:HIX0200286 HGNC:HGNC:20410 HPA:HPA039158 neXtProt:NX_Q8TE96
PharmGKB:PA134916600 InParanoid:Q8TE96 GenomeRNAi:165545
NextBio:88548 ArrayExpress:Q8TE96 Bgee:Q8TE96 CleanEx:HS_DQX1
Genevestigator:Q8TE96 Uniprot:Q8TE96
Length = 717
Score = 212 (79.7 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 57/184 (30%), Positives = 96/184 (52%)
Query: 13 RQYFDNAPLMNVPGRT--HPVEIFYTPEPERDYLEAAIRTVVQIHMC-EEVEGDVLLFLT 69
R ++ N P++++P P I++ P D +EAA + V+++ C +E+ GDVL+FL
Sbjct: 213 RAFWGNPPIVHIPREPGERPSPIYWDTIPP-DRVEAACQAVLEL--CRKELPGDVLVFLP 269
Query: 70 GQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKV 129
+EEI C+ + +E+++L + + +PL+ +Q ++E A RKV
Sbjct: 270 SEEEISLCCESLSREVESLLLQGLPPRVLPLHPDCGRAVQA-VYEDMDA--------RKV 320
Query: 130 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTR 189
VV+ +A+ S ++ + VID G + VYNPRIR E ++ PISK
Sbjct: 321 VVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFP 380
Query: 190 PGKC 193
PG C
Sbjct: 381 PGSC 384
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 209 (78.6 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 43/87 (49%), Positives = 60/87 (68%)
Query: 109 QQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESL 168
Q +IF+ AP G+ RK +V+TNIAETSLT+DG++FVID G+ K KV+NPRI +++L
Sbjct: 99 QAKIFQKAP-----DGV-RKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDAL 152
Query: 169 LVSPISKASXXXXXXXXXXTRPGKCFR 195
+ PIS+A+ T PG+CFR
Sbjct: 153 QIYPISQANANQRSGRAGRTGPGQCFR 179
Score = 175 (66.7 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 32/53 (60%), Positives = 46/53 (86%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+V+TNIAETSLT+DG++FVID G+ K KV+NPRI +++L + PIS+A+A QR+
Sbjct: 114 IVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRS 166
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 180 (68.4 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 49/164 (29%), Positives = 87/164 (53%)
Query: 31 VEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGP 90
+E+ + + + + A IR +V EE +G +L+FL G + I + ++
Sbjct: 576 MEMIDDDKVDLNLIAALIRHIV----LEEEDGAILVFLPGWDNISTLHDLLMSQVMF--- 628
Query: 91 EAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVID 150
++ IPL+S +P Q ++F+ P P G+ RK+V++TNIAETS+TID VV+VID
Sbjct: 629 KSDRFLIIPLHSLMPTVNQTQVFKKTP---P--GV-RKIVIATNIAETSITIDDVVYVID 682
Query: 151 PGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
G K+ ++ + + ++ +SKA+ +PG C+
Sbjct: 683 GGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCY 726
Score = 122 (48.0 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 37/115 (32%), Positives = 59/115 (51%)
Query: 143 DGVVFVIDPGFAKQKVYNPRI------RVESLLVSPI-SKASXXXXXXXXXXTRPGKCFR 195
DG + V PG+ + + + + L+ P+ S T PG R
Sbjct: 602 DGAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKKTPPG--VR 659
Query: 196 YIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
IV+ +TNIAETS+TID VV+VID G K+ ++ + + ++ +SKA+A+QR
Sbjct: 660 KIVI-ATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQR 713
Score = 60 (26.2 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPV 31
AT +YF N P++++PG T PV
Sbjct: 481 ATLNAEKFSEYFGNCPMIHIPGFTFPV 507
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 187 (70.9 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 53/159 (33%), Positives = 82/159 (51%)
Query: 38 EPERDYLEAAIRTVVQI-HMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELK 96
+ E+ L+ + + I H C+ G +L+FL G +EI RI + +
Sbjct: 615 DDEKVDLDLIMHLLYNICHSCDA--GAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQ 672
Query: 97 CIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQ 156
L+S + + Q+++ + PA G+ RK+++STNIAETS+T++ VVFVID G K+
Sbjct: 673 VFMLHSNMQTSDQKKVLKNPPA-----GV-RKIILSTNIAETSITVNDVVFVIDSGKVKE 726
Query: 157 KVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
K ++ V L + ISKAS RPG CFR
Sbjct: 727 KSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFR 765
Score = 38 (18.4 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 14 QYFDNAPLMNVPGRTHPV-EIF 34
+YF + P++ + GR V E+F
Sbjct: 373 RYFGSCPVIYIQGRPFEVKEMF 394
Score = 36 (17.7 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 189 RPGKCFRYIVVVSTNIAETSLT 210
RP RY ++ S+N+ ++
Sbjct: 1298 RPNMPIRYFIMKSSNLRNLEIS 1319
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 208 (78.3 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 68/222 (30%), Positives = 103/222 (46%)
Query: 5 ATRRQHLTRQYF--DNAPLMNVPGRTHPVEIFYTPEP--------------ERDYLEAA- 47
AT L YF + A L+ VPGR P+++ Y P P +R+ ++ A
Sbjct: 296 ATINVELFHGYFGEEGARLVQVPGRLFPIKLRYLPPPALELKAGQATSKRSQRNRIDPAP 355
Query: 48 ---IRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTL 104
+ +++ GDVL+F++G EIE + + + E +PL+S
Sbjct: 356 FVQVLSLIDQQYPTSERGDVLIFVSGVNEIES----VVEAVHEYATEQTHWLVLPLHSGQ 411
Query: 105 PPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIR 164
Q ++F+ AP G+ RK +VSTNIAETSLT+DGV FV+D G K+ ++ +
Sbjct: 412 AIADQSKVFDYAPE-----GM-RKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCK 465
Query: 165 VESLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAE 206
+ L +SK+S T PG CFR N E
Sbjct: 466 GQRLKEFWVSKSSADQRKGRAGRTGPGVCFRLYTAEQYNAFE 507
Score = 119 (46.9 bits), Expect = 0.00042, P = 0.00042
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+VSTNIAETSLT+DGV FV+D G K+ ++ + + L +SK+SA QR
Sbjct: 431 IVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQR 482
>UNIPROTKB|F1RLG0 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS50088
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:CU462841
Ensembl:ENSSSCT00000015529 Uniprot:F1RLG0
Length = 1151
Score = 182 (69.1 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 57/163 (34%), Positives = 85/163 (52%)
Query: 38 EPERDYLEAAIRTVVQI-HMCEEVEGDVLLFLTGQEEIEEACKRI----KKEIDNLGPEA 92
+ E+ L+ + + I H C+ G VL+FL G +EI RI K+ DN
Sbjct: 320 DDEKVDLDLIMHLLYNICHSCDA--GAVLIFLPGYDEIVGLRDRILFDDKRFADNTH--- 374
Query: 93 GELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPG 152
+ L+S + + Q+++ + PA G+ RK+++STNIAETS+T++ VVFVID G
Sbjct: 375 SRYQVFMLHSNMQTSDQKKVLKNPPA-----GV-RKIILSTNIAETSITVNDVVFVIDSG 428
Query: 153 FAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
K+K ++ V L + ISKAS RPG CFR
Sbjct: 429 KVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFR 471
Score = 120 (47.3 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+++STNIAETS+T++ VVFVID G K+K ++ V L + ISKASA QR
Sbjct: 405 IILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQR 457
Score = 38 (18.4 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 14 QYFDNAPLMNVPGRTHPV-EIF 34
+YF + P++ + GR V E+F
Sbjct: 78 RYFGSCPVIYIQGRPFEVKEMF 99
Score = 36 (17.7 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 189 RPGKCFRYIVVVSTNIAETSLT 210
RP RY ++ S+N+ ++
Sbjct: 1004 RPNMPIRYFIMKSSNLRNLEIS 1025
>UNIPROTKB|P37024 [details] [associations]
symbol:hrpB "predicted ATP-dependent helicase"
species:83333 "Escherichia coli K-12" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 GO:GO:0008026
EMBL:D42122 PIR:D64738 RefSeq:NP_414690.4 RefSeq:YP_488451.1
ProteinModelPortal:P37024 SMR:P37024 DIP:DIP-9938N IntAct:P37024
MINT:MINT-1231977 PRIDE:P37024 EnsemblBacteria:EBESCT00000000663
EnsemblBacteria:EBESCT00000016535 GeneID:12932407 GeneID:944845
KEGG:ecj:Y75_p0145 KEGG:eco:b0148 PATRIC:32115403 EchoBASE:EB2233
EcoGene:EG12329 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
ProtClustDB:PRK11664 BioCyc:EcoCyc:EG12329-MONOMER
BioCyc:ECOL316407:JW0144-MONOMER Genevestigator:P37024
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 Uniprot:P37024
Length = 809
Score = 205 (77.2 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 62/188 (32%), Positives = 93/188 (49%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT +Q AP++ GR+ PVE Y P P + A+ V M + G +
Sbjct: 157 ATLDNDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQRFDDAV-AVATAEMLRQESGSL 215
Query: 65 LLFLTGQEEIEEACKRIKKEI-DNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNG 123
LLFL G EI+ R+++++ +G + L C PLY L N Q++ AP
Sbjct: 216 LLFLPGVGEIQ----RVQEQLASRIGSDV--LLC-PLYGALSLNDQRKAILPAPQ----- 263
Query: 124 GIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXX 183
G+ RKVV++TNIAETSLTI+G+ V+D + ++PR + L+ +S+AS
Sbjct: 264 GM-RKVVLATNIAETSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAG 322
Query: 184 XXXXTRPG 191
PG
Sbjct: 323 RAGRLEPG 330
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 160 (61.4 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 47/130 (36%), Positives = 64/130 (49%)
Query: 67 FLTGQEEIEEACKRI-KKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGI 125
F T + E C K EI + + +K + LYS+LP Q+ IFE P N
Sbjct: 373 FNTDDHILNEICFHFGKTEI--MPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNT----- 425
Query: 126 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXX 185
RKV++STNIAETS+TI + +VID G K K ++ L V+ ISK S
Sbjct: 426 -RKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVNRGSNVLRVTQISKDSAIQRSGRA 484
Query: 186 XXTRPGKCFR 195
PG+ +R
Sbjct: 485 GREAPGQVYR 494
Score = 106 (42.4 bits), Expect = 7.6e-11, Sum P(3) = 7.6e-11
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V++STNIAETS+TI + +VID G K K ++ L V+ ISK SA QR+
Sbjct: 428 VILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVNRGSNVLRVTQISKDSAIQRS 481
Score = 97 (39.2 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIH 55
AT ++ Q+F+N P++ +P + H + I+Y DY+ + + T++QIH
Sbjct: 178 ATFDINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 61 (26.5 bits), Expect = 7.6e-11, Sum P(3) = 7.6e-11
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 62 GDVLLFLTGQEEIEEACKRIKKEI 85
GD+L+FL GQEEIE +K+++
Sbjct: 317 GDILVFLPGQEEIEMVNIMLKEKL 340
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 160 (61.4 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 47/130 (36%), Positives = 64/130 (49%)
Query: 67 FLTGQEEIEEACKRI-KKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGI 125
F T + E C K EI + + +K + LYS+LP Q+ IFE P N
Sbjct: 373 FNTDDHILNEICFHFGKTEI--MPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNT----- 425
Query: 126 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXX 185
RKV++STNIAETS+TI + +VID G K K ++ L V+ ISK S
Sbjct: 426 -RKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVNRGSNVLRVTQISKDSAIQRSGRA 484
Query: 186 XXTRPGKCFR 195
PG+ +R
Sbjct: 485 GREAPGQVYR 494
Score = 106 (42.4 bits), Expect = 7.6e-11, Sum P(3) = 7.6e-11
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V++STNIAETS+TI + +VID G K K ++ L V+ ISK SA QR+
Sbjct: 428 VILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVNRGSNVLRVTQISKDSAIQRS 481
Score = 97 (39.2 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIH 55
AT ++ Q+F+N P++ +P + H + I+Y DY+ + + T++QIH
Sbjct: 178 ATFDINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 61 (26.5 bits), Expect = 7.6e-11, Sum P(3) = 7.6e-11
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 62 GDVLLFLTGQEEIEEACKRIKKEI 85
GD+L+FL GQEEIE +K+++
Sbjct: 317 GDILVFLPGQEEIEMVNIMLKEKL 340
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 176 (67.0 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 48/158 (30%), Positives = 81/158 (51%)
Query: 42 DYLEAAIRTVVQIHMC-EEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELK--CI 98
D ++ + + H+ E EG +L+FL G + I + D + ++G + I
Sbjct: 482 DNIDLELTAALIRHIAVNENEGAILVFLPGWDNISTLNDLLMS--DQMF-KSGRYRFIII 538
Query: 99 PLYSTLPPNLQQRIFEAAPA--NKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQ 156
PL+S +P Q ++ P KP G+ RK+V++TNIAETS+TID VV+VID G K+
Sbjct: 539 PLHSLMPTVSQTQVISLFPQVFKKPPPGV-RKIVIATNIAETSITIDDVVYVIDGGKIKE 597
Query: 157 KVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
++ + + ++ +S A+ PGKC+
Sbjct: 598 THFDTQNNIRTMTAEWVSIANAKQRKGRAGRVSPGKCY 635
Score = 114 (45.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+V++TNIAETS+TID VV+VID G K+ ++ + + ++ +S A+A+QR
Sbjct: 570 IVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTMTAEWVSIANAKQR 622
Score = 62 (26.9 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPV 31
AT +YF+N P++++PG T PV
Sbjct: 380 ATLNAEKFSKYFNNCPMIHIPGYTFPV 406
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 193 (73.0 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 56/148 (37%), Positives = 76/148 (51%)
Query: 62 GDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKP 121
G +++FL G EI + C + N EA + +PL+S L P Q+R+F+ K
Sbjct: 864 GSIIVFLPGVGEINKCCNLLA----NKSNEA-DFMVLPLHSALTPEDQKRVFK-----KY 913
Query: 122 NGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXX 181
+G RKVVVSTNIAETS+TID V ID G AK YNP+ L+ S ISKA
Sbjct: 914 HGK--RKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFISKAEVKQR 971
Query: 182 XXXXXXTRPGKCFRYIVVVSTNIAETSL 209
R G ++ + S N+ E +
Sbjct: 972 RGRAGRVREGLSYK---LFSKNLYENDM 996
Score = 135 (52.6 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 31/53 (58%), Positives = 35/53 (66%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
VVVSTNIAETS+TID V ID G AK YNP+ L+ S ISKA +QR
Sbjct: 919 VVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFISKAEVKQR 971
Score = 48 (22.0 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 42 DYLEAAIRTVVQIHMCEE--VEGDVLLFLTGQEEIEEACKRIKKEIDNLGP 90
DY++ I T + +H +E + GD+L++ E ++E I K IDN GP
Sbjct: 492 DYIKKQILTRL-LHYLQEGNLIGDMLVYHI-YEWLKE---NISKIIDNPGP 537
Score = 42 (19.8 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFY 35
AT L +++F ++ GRT P+ ++
Sbjct: 762 ATVNVDLFKKFFPGLATCHIEGRTFPITDYF 792
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 197 (74.4 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 53/135 (39%), Positives = 74/135 (54%)
Query: 64 VLLFLTGQEEIEEACKRIKKEIDNLGPEA--GELKCIPLYSTLPPNLQQRIFEAAPANKP 121
+L+F+ G +I E C R+ K I EA + C+PL+S+L P QQ++FE AP
Sbjct: 900 ILVFVPGLSDILELCSRLGKPISTF-TEAICQRIWCVPLHSSLSPKDQQKVFEKAP---- 954
Query: 122 NGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSP-ISKASXXX 180
NG + KVV++TNIAETS+TI+ V V+D G Q +N I S++ SKAS
Sbjct: 955 NGRV--KVVIATNIAETSITIEDVEIVVDCGRVNQMTFNS-ITGNSVMSEEWTSKASCRQ 1011
Query: 181 XXXXXXXTRPGKCFR 195
T G CF+
Sbjct: 1012 RAGRAGRTSSGLCFK 1026
Score = 38 (18.4 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 21 LMNVPGRTHPVEIFYTPE 38
+ ++PG T PV+ Y E
Sbjct: 805 IFSIPGFTFPVKNIYINE 822
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 181 (68.8 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 54/157 (34%), Positives = 82/157 (52%)
Query: 55 HMCE-EVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIF 113
++CE E G +L+FLTG ++I +++ +I + + + + ++ Q+ IF
Sbjct: 491 NICENEGPGGILIFLTGWDDISSLKEKL--QIHPIFGNPDLVMLLACHGSMETFEQRLIF 548
Query: 114 EAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPI 173
E +P G+ RK+V++TNIAETS+TI+ V FVID G AK+ Y+ LL S I
Sbjct: 549 E-----EPASGV-RKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWI 602
Query: 174 SKASXXXXXXXXXXTRPGKCFR-YIVVVSTNIAETSL 209
SK S RPG+C+ Y V AE L
Sbjct: 603 SKVSAQQRRGRAGRVRPGQCYHLYPKCVYDAFAEYQL 639
Score = 127 (49.8 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 30/53 (56%), Positives = 37/53 (69%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+V++TNIAETS+TI+ V FVID G AK+ Y+ LL S ISK SAQQR
Sbjct: 558 IVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQR 610
Score = 50 (22.7 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPV 31
AT L YF A ++ +PG T+PV
Sbjct: 377 ATLDAELFSSYFGGAGVIYIPGFTYPV 403
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 204 (76.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 56/160 (35%), Positives = 84/160 (52%)
Query: 36 TPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDN--LGPEAG 93
T PE +E+ ++ +V+ EG +L+FL G EI+ + +DN P AG
Sbjct: 729 TINPE--LIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSL---LDNALFSPRAG 783
Query: 94 ELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGF 153
+ +PL+S L Q +F+ AP K RK+V+STNIAETS+TID VFV+D G
Sbjct: 784 KFILVPLHSALSGEDQALVFKKAPPGK------RKIVLSTNIAETSVTIDDCVFVVDCGL 837
Query: 154 AKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 193
K+K ++ +ESL + +S+A+ PG C
Sbjct: 838 MKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVC 877
Score = 167 (63.8 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 74/265 (27%), Positives = 117/265 (44%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPE--PERDY-LEAAIRTVVQIHMCE-EV 60
AT L YF AP++++PGRT PV+ + + D+ +E + ++ E E+
Sbjct: 617 ATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQEI 676
Query: 61 EGDVLLFLTGQEEIEEACKRIKKEIDNLGP------EAGELKCIPLYSTLPPNLQQRIFE 114
L + Q E K+IK E L E + C +Y P + + E
Sbjct: 677 LERELEYADVQASGEAPGKKIKDEKLTLAETYQRYAEYSKPTCKSIYLMEPMTINPELIE 736
Query: 115 AAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAK-QKVYNPRI-------RVE 166
+ K +V +G + + PGF + Q V++ + R
Sbjct: 737 SV----------LKYIVE---GSHDWPREGTILIFLPGFGEIQSVHDSLLDNALFSPRAG 783
Query: 167 SLLVSPISKA-SXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQ 225
++ P+ A S PGK R IV+ STNIAETS+TID VFV+D G K+
Sbjct: 784 KFILVPLHSALSGEDQALVFKKAPPGK--RKIVL-STNIAETSVTIDDCVFVVDCGLMKE 840
Query: 226 KVYNPRIRVESLLVSPISKASAQQR 250
K ++ +ESL + +S+A+A+QR
Sbjct: 841 KCFDSNRNMESLDLVWVSRANAKQR 865
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 194 (73.4 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 55/159 (34%), Positives = 83/159 (52%)
Query: 38 EPERDYLEAAIRTVVQI-HMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELK 96
+ E+ L+ + + I H CE G +L+FL G +EI RI + A +
Sbjct: 599 DDEKVDLDLIMHLLYNICHSCEA--GAILIFLPGYDEIVGLRDRILFDDKRFAENAHRYQ 656
Query: 97 CIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQ 156
L+S + + Q+++ + PA G+ RK+++STNIAETS+T++ VVFVID G K+
Sbjct: 657 VFMLHSNMQTSDQKKVLKNPPA-----GV-RKIILSTNIAETSITVNDVVFVIDSGKVKE 710
Query: 157 KVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
K ++ V L + ISKAS RPG CFR
Sbjct: 711 KSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFR 749
Score = 38 (18.4 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 14 QYFDNAPLMNVPGRTHPV-EIF 34
+YF + P++ + GR V E+F
Sbjct: 357 RYFGSCPVIYIQGRPFEVKEMF 378
>RGD|1591766 [details] [associations]
symbol:Dqx1 "DEAQ box RNA-dependent ATPase 1" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
RGD:1591766 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH473957
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
CTD:165545 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3 IPI:IPI00194915
RefSeq:NP_001102877.1 UniGene:Rn.154059 Ensembl:ENSRNOT00000011002
GeneID:680434 KEGG:rno:680434 UCSC:RGD:1591766 NextBio:718702
Uniprot:D4A474
Length = 717
Score = 200 (75.5 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 54/183 (29%), Positives = 90/183 (49%)
Query: 15 YFDNAPLMNVPGRT--HPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQE 72
++ N+P ++VP +P + Y D +EAA + V+++ EE GDVL++L +E
Sbjct: 212 FWGNSPTVHVPREPGENPT-LTYKDTVPADLVEAACQAVLELCQREEAPGDVLVYLPSEE 270
Query: 73 EIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVS 132
EI C+ + +E+ L + +PL+ +Q ++E + RK+VV+
Sbjct: 271 EISLCCESLSREMGMLAVPGPLPRVLPLHPGCGQAIQT-VYEDTDVSV------RKIVVT 323
Query: 133 TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGK 192
+A+ S ++ + VID G + VYNPRIR ES ++ ISK PG
Sbjct: 324 HWLADFSFSLPFIQHVIDSGLELRSVYNPRIRAESQVLRRISKCQAEARLLRARGFPPGT 383
Query: 193 CFR 195
C R
Sbjct: 384 CLR 386
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 179 (68.1 bits), Expect = 7.0e-15, Sum P(3) = 7.0e-15
Identities = 52/159 (32%), Positives = 81/159 (50%)
Query: 38 EPERDYLEAAIRTVVQI-HMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELK 96
+ E+ L+ + + I H C + +L+FL G +EI RI + +
Sbjct: 600 DDEKVDLDLIMHLLYNICHGCHKCA--ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQ 657
Query: 97 CIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQ 156
L+S + + Q+++ + PA G+ RK+++STNIAETS+T++ VVFVID G K+
Sbjct: 658 VFMLHSNMQTSDQKKVLKNPPA-----GV-RKIILSTNIAETSITVNDVVFVIDSGKVKE 711
Query: 157 KVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
K ++ V L + ISKAS RPG CFR
Sbjct: 712 KSFDALNFVTMLKMVWISKASAVQRKGRAGRCRPGICFR 750
Score = 121 (47.7 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+++STNIAETS+T++ VVFVID G K+K ++ V L + ISKASA QR
Sbjct: 684 IILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQR 736
Score = 38 (18.4 bits), Expect = 7.0e-15, Sum P(3) = 7.0e-15
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 14 QYFDNAPLMNVPGRTHPV-EIF 34
+YF + P++ + GR V E+F
Sbjct: 358 RYFGSCPVIYIQGRPFEVKEMF 379
Score = 36 (17.7 bits), Expect = 7.0e-15, Sum P(3) = 7.0e-15
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 189 RPGKCFRYIVVVSTNIAETSLT 210
RP RY ++ S+N+ ++
Sbjct: 1229 RPNMPIRYFIMKSSNLRNLEIS 1250
>UNIPROTKB|Q5THQ9 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL023803
UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI01009669 SMR:Q5THQ9
Ensembl:ENST00000441485 HOGENOM:HOG000202213 HOVERGEN:HBG079487
Uniprot:Q5THQ9
Length = 302
Score = 190 (71.9 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 40/100 (40%), Positives = 60/100 (60%)
Query: 17 DNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEE 76
D ++ V GRT PV+IFY P DY+++ + TVV+IH E +GDVL FLTGQEE+E
Sbjct: 196 DTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEG-DGDVLAFLTGQEEVET 254
Query: 77 ACKRIKKEIDNLGPEAGE--LKCIPLYSTLPPNLQQRIFE 114
+ ++ L + L+ +P+Y+ LP Q ++FE
Sbjct: 255 VVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFE 294
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 202 (76.2 bits), Expect = 8.9e-15, P = 8.9e-15
Identities = 56/186 (30%), Positives = 103/186 (55%)
Query: 11 LTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVE-GDVLLFLT 69
+ R++ DN+ + G+ + T PE+ ++ ++ + +C + E G +L+FL
Sbjct: 502 IIREHADNSQSNSQQGQQLLDKYMATINPEQ--VDVSLIQQLMRKICGDSEDGAILVFLP 559
Query: 70 GQEEIEEACKRIKKEIDN-LGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRK 128
G ++I + +R+ ++N ++ + I L+S +P Q+++F N+P G RK
Sbjct: 560 GWDDINKTRQRL---LENPFFADSAKFDIICLHSMVPAGEQKKVF-----NRPPPGC-RK 610
Query: 129 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXT 188
+V++TNIAE+++TID VV+VID G K+K Y+P V +L S +SKA+
Sbjct: 611 IVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAGRC 670
Query: 189 RPGKCF 194
+PG C+
Sbjct: 671 QPGICY 676
Score = 134 (52.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 31/61 (50%), Positives = 45/61 (73%)
Query: 190 PGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQ 249
PG C + +V++TNIAE+++TID VV+VID G K+K Y+P V +L S +SKA+A+Q
Sbjct: 606 PG-CRK--IVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQ 662
Query: 250 R 250
R
Sbjct: 663 R 663
Score = 59 (25.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 15 YFDNAPLMNVPGRTHPVEIFY 35
YF P++ VPG T+PV Y
Sbjct: 356 YFGGCPVVRVPGFTYPVRTLY 376
>UNIPROTKB|Q3ZBE0 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0004386
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 EMBL:BC103411 IPI:IPI00704154
RefSeq:NP_001030399.1 UniGene:Bt.49583 PRIDE:Q3ZBE0
Ensembl:ENSBTAT00000033191 GeneID:517947 KEGG:bta:517947 CTD:165545
InParanoid:Q3ZBE0 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3
NextBio:20872543 Uniprot:Q3ZBE0
Length = 719
Score = 197 (74.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 53/184 (28%), Positives = 94/184 (51%)
Query: 13 RQYFDNAPLMNVPGRTH--PVEIFYTPEPERDYLEAAIRTVVQIHMC-EEVEGDVLLFLT 69
+ ++ P + VP +T P ++ P D ++AA + V++ C EE GDVL++L
Sbjct: 213 QDFWGGPPTVCVPRKTGSCPTPVYRDSLPA-DRVDAACQAVLE--WCQEEAPGDVLVYLP 269
Query: 70 GQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKV 129
+EEI C+ + +++ +L + + +PL+ P Q + +A + +G RKV
Sbjct: 270 SEEEISLCCESLSRKVRSLENQGPPPRVLPLH----PGCGQAV-QAVYEDTESGA--RKV 322
Query: 130 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTR 189
VV+ +A+ S ++ + VID G + VY+P+IR ES ++ P+SK
Sbjct: 323 VVTHWLADFSFSLPSIRHVIDSGLELRSVYSPQIRAESQVLRPVSKCQAEARRLRAAGIP 382
Query: 190 PGKC 193
PG C
Sbjct: 383 PGSC 386
>UNIPROTKB|E2QXW1 [details] [associations]
symbol:DQX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:165545 KO:K14433 OMA:CGQAVQA
EMBL:AAEX03010965 RefSeq:XP_532994.2 Ensembl:ENSCAFT00000013395
GeneID:475784 KEGG:cfa:475784 NextBio:20851558 Uniprot:E2QXW1
Length = 719
Score = 197 (74.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 55/181 (30%), Positives = 93/181 (51%)
Query: 15 YFDNAPLMNVP-GR-THPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQE 72
++ N +++VP G P ++ P D +EAA + V+++ +E GDVL++L +E
Sbjct: 215 FWGNPTIVHVPRGPGACPTPVYRDIVPT-DRVEAACQAVLEL-CAKEAPGDVLVYLPSEE 272
Query: 73 EIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVS 132
EI + C+ + +E++ L + +PL+ P +Q AA + G RKVVV+
Sbjct: 273 EILQCCESLSREVEPLALRGPPPRVLPLHPGHGPAVQ-----AAYEDIDLGA--RKVVVT 325
Query: 133 TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGK 192
+A+ S ++ + VID G + VYNP+IR ES ++ PIS+ PG
Sbjct: 326 HWLADFSFSLPSIRHVIDSGLELRSVYNPQIRAESQVLRPISRCQAEARRLRARGIPPGS 385
Query: 193 C 193
C
Sbjct: 386 C 386
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 146 (56.5 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 43/113 (38%), Positives = 58/113 (51%)
Query: 86 DNLGPEAGE---LKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTI 142
D G +G+ L +PLYS L Q RIF P P+G R VVSTN+AETSLTI
Sbjct: 605 DESGMGSGQRQPLWVLPLYSLLSSEKQNRIF--LPV--PDGC--RLCVVSTNVAETSLTI 658
Query: 143 DGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
+ +V+D G K ++Y+ V + +V+ SKAS G C+R
Sbjct: 659 PHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYR 711
Score = 122 (48.0 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 197 IVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+ VVSTN+AETSLTI + +V+D G K ++Y+ V + +V+ SKASA QRA
Sbjct: 644 LCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRA 698
Score = 111 (44.1 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 12 TRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQ 71
TR + PL+ V R PV I + DY+ A R ++IH + EG +L+F+TGQ
Sbjct: 427 TRLFKIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIHN-KLPEGGILIFVTGQ 485
Query: 72 EEIEEACKRIKK 83
+E+ + +++++
Sbjct: 486 QEVNQLVRKLRR 497
>WB|WBGene00004355 [details] [associations]
symbol:rha-1 species:6239 "Caenorhabditis elegans"
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IMP] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0051301 GO:GO:0007067 GO:GO:0006355
GO:GO:0003677 Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0007281
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257 KO:K13184
EMBL:Z50071 PIR:T24664 RefSeq:NP_495890.2 ProteinModelPortal:Q22307
SMR:Q22307 STRING:Q22307 PaxDb:Q22307 EnsemblMetazoa:T07D4.3.1
EnsemblMetazoa:T07D4.3.2 GeneID:174417 KEGG:cel:CELE_T07D4.3
UCSC:T07D4.3 CTD:174417 WormBase:T07D4.3 InParanoid:Q22307
OMA:DDWIRLQ NextBio:883938 GO:GO:0045814 Uniprot:Q22307
Length = 1301
Score = 179 (68.1 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 51/155 (32%), Positives = 74/155 (47%)
Query: 40 ERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIP 99
E+D I ++ V+G VL+FL G EI C R+ E G +A + + +P
Sbjct: 638 EKDIPFGVIEAILNDIASRGVDGAVLVFLPGWAEIMTLCNRLL-EHQEFG-QANKYEILP 695
Query: 100 LYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVY 159
L+S L Q+++F P RK++VSTNIAETS+TID VV+VID AK+++Y
Sbjct: 696 LHSQLTSQEQRKVFNHYPGK-------RKIIVSTNIAETSITIDDVVYVIDSCKAKERMY 748
Query: 160 NPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
+ SK + R G F
Sbjct: 749 TSNNNMVHFATVWASKTNVIQRRGRAGRVRAGYAF 783
Score = 114 (45.2 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 36/114 (31%), Positives = 52/114 (45%)
Query: 142 IDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRYI---- 197
+DG V V PG+A+ R+ +E +K K F +
Sbjct: 658 VDGAVLVFLPGWAEIMTLCNRL-LEHQEFGQANKYEILPLHSQLTSQEQRKVFNHYPGKR 716
Query: 198 -VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
++VSTNIAETS+TID VV+VID AK+++Y + SK + QR
Sbjct: 717 KIIVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQR 770
Score = 47 (21.6 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 20 PLMNVPGRTHPVEIFY 35
P++ + GRT PV+ FY
Sbjct: 558 PVITMHGRTFPVQSFY 573
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 185 (70.2 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 53/159 (33%), Positives = 82/159 (51%)
Query: 38 EPERDYLEAAIRTVVQI-HMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELK 96
+ E+ L+ + + I H C+ G +L+FL G +EI RI + +
Sbjct: 599 DDEKVDLDLIMHLLYNICHGCDA--GAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQ 656
Query: 97 CIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQ 156
L+S + + Q+++ + PA G+ RK+++STNIAETS+T++ VVFVID G K+
Sbjct: 657 VFMLHSNMQTSDQKKVLKNPPA-----GV-RKIILSTNIAETSITVNDVVFVIDSGKVKE 710
Query: 157 KVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
K ++ V L + ISKAS RPG CFR
Sbjct: 711 KSFDALNFVTMLKMVWISKASAVQRKGRAGRCRPGICFR 749
Score = 121 (47.7 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+++STNIAETS+T++ VVFVID G K+K ++ V L + ISKASA QR
Sbjct: 683 IILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQR 735
Score = 38 (18.4 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 14 QYFDNAPLMNVPGRTHPV-EIF 34
+YF + P++ + GR V E+F
Sbjct: 357 RYFGSCPVIYIQGRPFEVKEMF 378
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 170 (64.9 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 47/143 (32%), Positives = 80/143 (55%)
Query: 56 MCEEVEGD----VLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQR 111
+C V+G+ VL+F+TG ++I ++ E +L + ++ + + ++ + Q+
Sbjct: 569 LCHIVKGERPGAVLVFMTGWDDINSLKNQL--EAHSLLGDPNKVLLLACHGSMASSEQRL 626
Query: 112 IFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVS 171
IF+ +P GI RK+V++TN+AETS+TI+ VV+VID G AK+ Y+ LL S
Sbjct: 627 IFD-----RPPEGI-RKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPS 680
Query: 172 PISKASXXXXXXXXXXTRPGKCF 194
ISKA+ PG+C+
Sbjct: 681 WISKAAARQRRGRAGRVMPGECY 703
Score = 125 (49.1 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 189 RPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQ 248
RP + R IV+ +TN+AETS+TI+ VV+VID G AK+ Y+ LL S ISKA+A+
Sbjct: 630 RPPEGIRKIVL-ATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAAR 688
Query: 249 QR 250
QR
Sbjct: 689 QR 690
Score = 74 (31.1 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAA 47
AT L YF AP M++PG T+PV + DYLE +
Sbjct: 456 ATLNAELFSSYFGGAPAMHIPGFTYPVRAHFL----EDYLETS 494
Score = 42 (19.8 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 85 IDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPA 118
+ +L P +LK I + +TL L F APA
Sbjct: 439 LKDLLPRRPDLKLILMSATLNAELFSSYFGGAPA 472
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 188 (71.2 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 54/159 (33%), Positives = 82/159 (51%)
Query: 38 EPERDYLEAAIRTVVQI-HMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELK 96
+ E+ L+ + + I H C+ G VL+FL G +EI RI + +
Sbjct: 600 DDEKVDLDLIMHLLYNICHSCDA--GAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQ 657
Query: 97 CIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQ 156
L+S + + Q+++ + PA G+ RK+++STNIAETS+T++ VVFVID G K+
Sbjct: 658 VFMLHSNMQTSDQKKVLKNPPA-----GV-RKIILSTNIAETSITVNDVVFVIDSGKVKE 711
Query: 157 KVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
K ++ V L + ISKAS RPG CFR
Sbjct: 712 KSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFR 750
Score = 38 (18.4 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 14 QYFDNAPLMNVPGRTHPV-EIF 34
+YF + P++ + GR V E+F
Sbjct: 358 RYFGSCPVIYIQGRPFEVKEMF 379
>TIGR_CMR|CPS_4302 [details] [associations]
symbol:CPS_4302 "ATP-dependent helicase HrpB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 RefSeq:YP_270952.1
ProteinModelPortal:Q47W70 STRING:Q47W70 DNASU:3518946
GeneID:3518946 KEGG:cps:CPS_4302 PATRIC:21471457
BioCyc:CPSY167879:GI48-4312-MONOMER Uniprot:Q47W70
Length = 845
Score = 194 (73.4 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 61/184 (33%), Positives = 92/184 (50%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFY-TPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQE 72
Q +A L+N GR++P+E+ Y P + + E A+ V++ M + G +L+FL G
Sbjct: 172 QALPDAYLLNSEGRSYPIEVSYQAPRAHQRWREHAL-AVIKDKMYNHI-GSILVFLPGVA 229
Query: 73 EIEEACKRIKKEIDNLGPEAGE-LKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVV 131
+I +D+L + E +K PL+ L QQ+ AP + RK+V+
Sbjct: 230 DIRFL-------LDSLMAQKVEGVKICPLFGELSLKEQQQAI--APCLSGH----RKIVL 276
Query: 132 STNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPG 191
+TNIAETSLTIDG+ VID G K V++ + L+ ISKAS G
Sbjct: 277 ATNIAETSLTIDGIDLVIDCGLEKVAVFDSASLMNKLMQKQISKASAVQRAGRAGRLMHG 336
Query: 192 KCFR 195
+C R
Sbjct: 337 QCIR 340
Score = 128 (50.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+V++TNIAETSLTIDG+ VID G K V++ + L+ ISKASA QRA
Sbjct: 274 IVLATNIAETSLTIDGIDLVIDCGLEKVAVFDSASLMNKLMQKQISKASAVQRA 327
Score = 49 (22.3 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 90 PEAGELKCIPLYS-TLPPNLQQRIFEAAP 117
P AG+ C+PL+ TLP ++I+ P
Sbjct: 34 PGAGKSTCLPLWLLTLPSLANKKIYLLQP 62
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 177 (67.4 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 49/134 (36%), Positives = 66/134 (49%)
Query: 61 EGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANK 120
+G +L+FL G EI K I K DN + +PL+S L Q+ IF+ AP K
Sbjct: 820 DGSILIFLPGVLEISSTIKEINKSSDN------KFMALPLHSGLTSAEQKSIFKTAPKGK 873
Query: 121 PNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXX 180
RKVVVSTNIAETS+TI V VID G +K ++ ++ L+ S S+A
Sbjct: 874 ------RKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQ 927
Query: 181 XXXXXXXTRPGKCF 194
G C+
Sbjct: 928 RRGRAGRVTAGTCY 941
Score = 47 (21.6 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 16 FDNAPL--MNVPGRTHPVEIFY 35
F PL +++ GRT+P++ FY
Sbjct: 742 FFEKPLTPLHIEGRTYPIQDFY 763
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 177 (67.4 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 49/134 (36%), Positives = 66/134 (49%)
Query: 61 EGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANK 120
+G +L+FL G EI K I K DN + +PL+S L Q+ IF+ AP K
Sbjct: 820 DGSILIFLPGVLEISSTIKEINKSSDN------KFMALPLHSGLTSAEQKSIFKTAPKGK 873
Query: 121 PNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXX 180
RKVVVSTNIAETS+TI V VID G +K ++ ++ L+ S S+A
Sbjct: 874 ------RKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQ 927
Query: 181 XXXXXXXTRPGKCF 194
G C+
Sbjct: 928 RRGRAGRVTAGTCY 941
Score = 47 (21.6 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 16 FDNAPL--MNVPGRTHPVEIFY 35
F PL +++ GRT+P++ FY
Sbjct: 742 FFEKPLTPLHIEGRTYPIQDFY 763
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 195 (73.7 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 53/126 (42%), Positives = 70/126 (55%)
Query: 70 GQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKV 129
G E EE K I++E GP + +PLYS LP Q R+FE P P+G R V
Sbjct: 653 GDENEEEEFK-IEEEEAGTGPS--RMHVLPLYSLLPTKEQLRVFEP-P---PDGS--RLV 703
Query: 130 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTR 189
V++TN+AETSLTI G+ +V D G +K++ Y+ V+S V ISKAS T
Sbjct: 704 VLATNVAETSLTIPGIRYVFDSGRSKERKYDQLTGVQSFEVGWISKASANQREGRAGRTG 763
Query: 190 PGKCFR 195
PG C+R
Sbjct: 764 PGHCWR 769
Score = 129 (50.5 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 28/54 (51%), Positives = 39/54 (72%)
Query: 197 IVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+VV++TN+AETSLTI G+ +V D G +K++ Y+ V+S V ISKASA QR
Sbjct: 702 LVVLATNVAETSLTIPGIRYVFDSGRSKERKYDQLTGVQSFEVGWISKASANQR 755
Score = 118 (46.6 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 24/69 (34%), Positives = 41/69 (59%)
Query: 20 PLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACK 79
P++ V GR +PV + + + DY+E A R + + H + G +L+FLTGQ EI + K
Sbjct: 543 PVLEVEGRQYPVTLHFARKTHHDYVEEAFRKISRGHK-KLPPGGMLVFLTGQNEITQLSK 601
Query: 80 RIKKEIDNL 88
R+K + + +
Sbjct: 602 RLKLQFNGV 610
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 173 (66.0 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 49/135 (36%), Positives = 75/135 (55%)
Query: 62 GDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCI--PLYSTLPPNLQQRIFEAAPAN 119
G VL+FL G EI+ ++++ ++L +C+ PL+S+L QQ +F
Sbjct: 850 GAVLVFLPGLAEIKMLYEQLQS--NSLFNNRRSHRCVIHPLHSSLSSEEQQAVFV----- 902
Query: 120 KPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXX 179
KP G+ K+++STNIAETS+TID VV+VID G K+K Y+ +ESL + +S+A+
Sbjct: 903 KPPMGV-TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANAL 961
Query: 180 XXXXXXXXTRPGKCF 194
G CF
Sbjct: 962 QRKGRAGRVASGVCF 976
Score = 130 (50.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 41/116 (35%), Positives = 62/116 (53%)
Query: 144 GVVFVIDPGFAKQKVYNPRIRVESL---------LVSPISKASXXXXXXXXXXTRPGKCF 194
G V V PG A+ K+ +++ SL ++ P+ +S +P
Sbjct: 850 GAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLH-SSLSSEEQQAVFVKPPMGV 908
Query: 195 RYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
I++ STNIAETS+TID VV+VID G K+K Y+ +ESL + +S+A+A QR
Sbjct: 909 TKIII-STNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQR 963
Score = 65 (27.9 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQ-----IHMCEE 59
AT L +YF P++ +PGR PV+ F+ D L A R V+Q + ++
Sbjct: 702 ATLDAGLFSKYFSYCPVITIPGRAFPVDQFFL----EDAL-AVTRYVLQDGSPYMRSMKQ 756
Query: 60 VEGDVLLFL---TGQEEIEE 76
+ + L T QEE+EE
Sbjct: 757 IAKEKLKARHNRTAQEEVEE 776
Score = 40 (19.1 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 58 EEVEGDVLLFLTGQEEIEEACK 79
EEVE D+ L L Q+E EE+ K
Sbjct: 772 EEVEEDLRLSLHLQDE-EESVK 792
>UNIPROTKB|F5H625 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
IPI:IPI01010408 DNASU:79665 HGNC:HGNC:18018 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 EMBL:AC091271 EMBL:AC004167
Ensembl:ENST00000538926 UCSC:uc010woe.2 ArrayExpress:F5H625
Bgee:F5H625 Uniprot:F5H625
Length = 250
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 43/87 (49%), Positives = 54/87 (62%)
Query: 109 QQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESL 168
Q+RIF P P GI RK V+STNI+ TSLTIDG+ +V+D GF KQ +NPR+ ++ L
Sbjct: 3 QRRIFLPPP---P--GI-RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDIL 56
Query: 169 LVSPISKASXXXXXXXXXXTRPGKCFR 195
V PISK+ T GKCFR
Sbjct: 57 EVVPISKSEALQRSGRAGRTSSGKCFR 83
Score = 149 (57.5 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
V+STNI+ TSLTIDG+ +V+D GF KQ +NPR+ ++ L V PISK+ A QR+
Sbjct: 18 VISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRS 70
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 173 (66.0 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 48/152 (31%), Positives = 76/152 (50%)
Query: 44 LEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYST 103
L++ R VV VE + L T E+I++ + E+ + +PLYS
Sbjct: 655 LKSRARIVVS-RKTMSVENEDLQSET--EDIDQVPTSSSSSV-TYDDESEPMYVLPLYSL 710
Query: 104 LPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRI 163
L Q ++F+++P R +V+TN+AETS+TI + +V+D G AK++VYN +
Sbjct: 711 LTTEDQMKVFDSSPEGH------RMCIVATNVAETSITIPNIRYVVDCGKAKERVYNEKT 764
Query: 164 RVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
V+ V ISKA+ T PG C+R
Sbjct: 765 SVQKFEVRWISKANADQRAGRAGRTGPGHCYR 796
Score = 133 (51.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
+V+TN+AETS+TI + +V+D G AK++VYN + V+ V ISKA+A QRA
Sbjct: 731 IVATNVAETSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRA 783
Score = 119 (46.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 20 PLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACK 79
P++ + R +PV I + + DYL+ A V IH G +L+FLTGQ+E+E+ C+
Sbjct: 584 PIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHK-RLPAGSILVFLTGQQEVEQLCQ 642
Query: 80 RIKK 83
++K
Sbjct: 643 MLRK 646
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 171 (65.3 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 48/135 (35%), Positives = 75/135 (55%)
Query: 62 GDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCI--PLYSTLPPNLQQRIFEAAPAN 119
G +L+FL G EI+ ++++ ++L +C+ PL+S+L QQ +F
Sbjct: 800 GAILVFLPGLAEIKMLYEQLQS--NSLFNNRRSHRCVIHPLHSSLSSEEQQAVFV----- 852
Query: 120 KPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXX 179
KP G+ K+++STNIAETS+TID VV+VID G K+K Y+ +ESL + +S+A+
Sbjct: 853 KPPLGV-TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANAL 911
Query: 180 XXXXXXXXTRPGKCF 194
G CF
Sbjct: 912 QRKGRAGRVASGVCF 926
Score = 128 (50.1 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 40/116 (34%), Positives = 62/116 (53%)
Query: 144 GVVFVIDPGFAKQKVYNPRIRVESL---------LVSPISKASXXXXXXXXXXTRPGKCF 194
G + V PG A+ K+ +++ SL ++ P+ +S +P
Sbjct: 800 GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLH-SSLSSEEQQAVFVKPPLGV 858
Query: 195 RYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
I++ STNIAETS+TID VV+VID G K+K Y+ +ESL + +S+A+A QR
Sbjct: 859 TKIII-STNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQR 913
Score = 63 (27.2 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFY 35
AT L +YF P++ +PGR PV+ F+
Sbjct: 652 ATLDAGLFSKYFSYCPVITIPGRAFPVDQFF 682
Score = 40 (19.1 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 58 EEVEGDVLLFLTGQEEIEEACK 79
EEVE D+ L L Q+E EE+ K
Sbjct: 722 EEVEEDLRLALHLQDE-EESVK 742
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 171 (65.3 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 48/135 (35%), Positives = 75/135 (55%)
Query: 62 GDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCI--PLYSTLPPNLQQRIFEAAPAN 119
G +L+FL G EI+ ++++ ++L +C+ PL+S+L QQ +F
Sbjct: 853 GAILVFLPGLAEIKMLYEQLQS--NSLFNNRRSHRCVIHPLHSSLSSEEQQAVFV----- 905
Query: 120 KPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXX 179
KP G+ K+++STNIAETS+TID VV+VID G K+K Y+ +ESL + +S+A+
Sbjct: 906 KPPLGV-TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANAL 964
Query: 180 XXXXXXXXTRPGKCF 194
G CF
Sbjct: 965 QRKGRAGRVASGVCF 979
Score = 128 (50.1 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 40/116 (34%), Positives = 62/116 (53%)
Query: 144 GVVFVIDPGFAKQKVYNPRIRVESL---------LVSPISKASXXXXXXXXXXTRPGKCF 194
G + V PG A+ K+ +++ SL ++ P+ +S +P
Sbjct: 853 GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLH-SSLSSEEQQAVFVKPPLGV 911
Query: 195 RYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
I++ STNIAETS+TID VV+VID G K+K Y+ +ESL + +S+A+A QR
Sbjct: 912 TKIII-STNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQR 966
Score = 63 (27.2 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFY 35
AT L +YF P++ +PGR PV+ F+
Sbjct: 705 ATLDAGLFSKYFSYCPVITIPGRAFPVDQFF 735
Score = 40 (19.1 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 58 EEVEGDVLLFLTGQEEIEEACK 79
EEVE D+ L L Q+E EE+ K
Sbjct: 775 EEVEEDLRLALHLQDE-EESVK 795
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 158 (60.7 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 37/84 (44%), Positives = 52/84 (61%)
Query: 112 IFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVS 171
+F+ AP P G+ RK ++STNIAETS+TIDG+ FV+D G K+ Y+P+ +++ L
Sbjct: 340 VFDVAP---P--GV-RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEF 393
Query: 172 PISKASXXXXXXXXXXTRPGKCFR 195
IS+AS T PG CFR
Sbjct: 394 WISQASAEQRKGRAGRTGPGVCFR 417
Score = 134 (52.2 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 199 VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
++STNIAETS+TIDG+ FV+D G K+ Y+P+ +++ L IS+ASA+QR
Sbjct: 352 ILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQR 403
Score = 75 (31.5 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEP 39
AT L YF NAP++ VPGR P+ +F P
Sbjct: 312 ATINISLFSSYFSNAPVVQVPGRLFPITVFDVAPP 346
Score = 40 (19.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 157 KVYNPRIRVESLLVSPISKAS 177
+ Y+PR R+ ++ P ++ S
Sbjct: 98 RTYDPRYRINLSVLGPATRGS 118
Score = 37 (18.1 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 91 EAGELK-CIPLYSTLP----PNLQQRIFEAAPANKPNGGIGRKVVVSTNIAE 137
+ G+ K IP + LP P + + PA + + G+GR + +AE
Sbjct: 82 DPGQPKHSIPALADLPRTYDPRYRINLSVLGPATRGSQGLGRHLPAE-RVAE 132
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 168 (64.2 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 54/175 (30%), Positives = 83/175 (47%)
Query: 38 EPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAG--EL 95
E + +EA ++ + + EV G VL+FL G I K ++ + P G +
Sbjct: 637 ETSFELIEALLKYIETL----EVPGAVLVFLPGWNLIYFMQKHLE-----MNPHFGGHQY 687
Query: 96 KCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAK 155
+ +PL+S +P Q+R+FE P G+ KV++STNIAETS+TI+ VVFV+D K
Sbjct: 688 RILPLHSQIPREEQRRVFEPVP-----DGV-TKVILSTNIAETSITINDVVFVLDSCKQK 741
Query: 156 QKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLT 210
K++ + + SK + RPG CF ET +T
Sbjct: 742 VKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFEKLETHMT 796
Score = 95 (38.5 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
V++STNIAETS+TI+ VVFV+D K K++ + + SK + +QR
Sbjct: 715 VILSTNIAETSITINDVVFVLDSCKQKVKLFTSHNNMTNYATVWASKTNLEQR 767
Score = 67 (28.6 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFY 35
AT + ++YF N P++ V GR HPV+ ++
Sbjct: 551 ATIDTTMFKEYFFNCPVIEVHGRAHPVQEYF 581
>UNIPROTKB|Q9KUC1 [details] [associations]
symbol:VC_0601 "ATP-dependent helicase HrpB" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI ProtClustDB:PRK11664 InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 PIR:H82302 RefSeq:NP_230251.1
ProteinModelPortal:Q9KUC1 DNASU:2615389 GeneID:2615389
KEGG:vch:VC0601 PATRIC:20080310 Uniprot:Q9KUC1
Length = 820
Score = 184 (69.8 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 55/191 (28%), Positives = 89/191 (46%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT Q + A + GR P+EI Y P + L A++ ++ H+ + G +
Sbjct: 157 ATLDQQALQNLLPQASYVESQGRGFPIEIRYQPLRSDEPLVTAMQRQIR-HLLQHETGSL 215
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGG 124
L FL G I + + +++ +L A E++ PLY + QQR A +
Sbjct: 216 LAFLPGAASINQ----LTEQLSDL---ASEVEICPLYGQMEFAAQQRAIAPTAAGR---- 264
Query: 125 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXX 184
RKVV++TNIAETSLTI+G+ V+D G + ++ + + L I+++S
Sbjct: 265 --RKVVLATNIAETSLTIEGIRIVLDSGLERSARFDLKTGITRLEQVRIAQSSAEQRAGR 322
Query: 185 XXXTRPGKCFR 195
PG C R
Sbjct: 323 AGRLEPGICVR 333
>TIGR_CMR|VC_0601 [details] [associations]
symbol:VC_0601 "ATP-dependent helicase HrpB" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI ProtClustDB:PRK11664 InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 PIR:H82302 RefSeq:NP_230251.1
ProteinModelPortal:Q9KUC1 DNASU:2615389 GeneID:2615389
KEGG:vch:VC0601 PATRIC:20080310 Uniprot:Q9KUC1
Length = 820
Score = 184 (69.8 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 55/191 (28%), Positives = 89/191 (46%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 64
AT Q + A + GR P+EI Y P + L A++ ++ H+ + G +
Sbjct: 157 ATLDQQALQNLLPQASYVESQGRGFPIEIRYQPLRSDEPLVTAMQRQIR-HLLQHETGSL 215
Query: 65 LLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGG 124
L FL G I + + +++ +L A E++ PLY + QQR A +
Sbjct: 216 LAFLPGAASINQ----LTEQLSDL---ASEVEICPLYGQMEFAAQQRAIAPTAAGR---- 264
Query: 125 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXX 184
RKVV++TNIAETSLTI+G+ V+D G + ++ + + L I+++S
Sbjct: 265 --RKVVLATNIAETSLTIEGIRIVLDSGLERSARFDLKTGITRLEQVRIAQSSAEQRAGR 322
Query: 185 XXXTRPGKCFR 195
PG C R
Sbjct: 323 AGRLEPGICVR 333
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 184 (69.8 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 59/183 (32%), Positives = 96/183 (52%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPE--------PERDY------------LEAAIRTVVQI 54
YF + P++ VPG +PV+ +Y E R Y L+ V+QI
Sbjct: 646 YFGDCPVVKVPGFMYPVKEYYLEEILAKLGRHRHRHYEIKQSDDECVLDLDLITDLVLQI 705
Query: 55 HMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFE 114
E G +L FL G +EI+ +R+ ++ LG + +P++S +P QQ IF+
Sbjct: 706 DAHGE-PGGILCFLPGWQEIKGVQQRL---LEMLGSQNSRYLVLPVHSNIPMMDQQNIFQ 761
Query: 115 AAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPIS 174
P P G+ RK+V++TNIAETS+TI+ +V V+D G K++ Y+ + +V L +S
Sbjct: 762 RPP---P--GV-RKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVS 815
Query: 175 KAS 177
K++
Sbjct: 816 KSN 818
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 170 (64.9 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 46/153 (30%), Positives = 75/153 (49%)
Query: 58 EEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAP 117
+ + G +L+FL G I K ++ N+ + + + +P +S +P + Q+++FE P
Sbjct: 650 KNIPGAILVFLPGWNLIFALMKFLQNT--NIFGDTSQYQILPCHSQIPRDEQRKVFEPVP 707
Query: 118 ANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKAS 177
G+ K+++STNIAETS+TID +VFVID A+ K++ + S SK +
Sbjct: 708 E-----GV-TKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTN 761
Query: 178 XXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLT 210
RPG CF E +LT
Sbjct: 762 LEQRKGRAGRVRPGFCFTLCSRARFQALEDNLT 794
Score = 105 (42.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+++STNIAETS+TID +VFVID A+ K++ + S SK + +QR
Sbjct: 713 IILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQR 765
Score = 60 (26.2 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFY 35
+YF P++ VPGR PV+ F+
Sbjct: 549 KYFGICPVLEVPGRAFPVQQFF 570
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 183 (69.5 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 74/255 (29%), Positives = 110/255 (43%)
Query: 12 TRQYFDNAPLMNVPGRTHPVEIFYTPE-PERDYLEAAIRTVVQIHMCEEVEGDVLLFLTG 70
TR + P++ V R PV + + + P DY R V +IH G +L+FLTG
Sbjct: 410 TRLFAGTPPVLQVDARQFPVTVHFNKKTPLDDYSGECFRKVCKIHRMLP-SGGILVFLTG 468
Query: 71 QEEIEEACKRIKKEI-----DNLGPEAGELK-CIPLYSTLPPNLQQRI---FEAAPA-NK 120
Q E+ C+R++K G + + K + + +++ F+ P N
Sbjct: 469 QAEVHSLCRRLRKAFPFQKNSTAGDDDDDRKESVEEMRKFKKSRRRKKGDRFQTLPRINL 528
Query: 121 PNGGIGRKVVVSTNI----AETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKA 176
N + V V AET I G +D G + L V P+
Sbjct: 529 DNYAV---VPVDEGDEDRDAETDDDIAGSDVDLDLGDGDSEEEEKSDSSLPLYVLPLY-- 583
Query: 177 SXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVES 236
S RP + VV+TN+AETSLTI G+ +V+D G K++ Y+ V S
Sbjct: 584 SLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRFYDKITGVSS 643
Query: 237 LLVSPISKASAQQRA 251
V+ IS+ASA QRA
Sbjct: 644 FRVTWISQASANQRA 658
Score = 168 (64.2 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 40/101 (39%), Positives = 54/101 (53%)
Query: 95 LKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFA 154
L +PLYS L P Q ++F P R VV+TN+AETSLTI G+ +V+D G
Sbjct: 577 LYVLPLYSLLAPEKQAKVFRPPPPGT------RLCVVATNVAETSLTIPGIKYVVDCGKV 630
Query: 155 KQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
K++ Y+ V S V+ IS+AS T PG C+R
Sbjct: 631 KKRFYDKITGVSSFRVTWISQASANQRAGRAGRTEPGHCYR 671
>UNIPROTKB|I3LRK0 [details] [associations]
symbol:I3LRK0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00550000074257 EMBL:FP102731 EMBL:CU694750
Ensembl:ENSSSCT00000027140 Uniprot:I3LRK0
Length = 524
Score = 178 (67.7 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 52/156 (33%), Positives = 83/156 (53%)
Query: 42 DYLEAAIRTVVQ-IHMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCI-- 98
+ +EA + +V H G +L+FL G EI+ ++++ ++L +C+
Sbjct: 21 ELIEALLEWIVDGKHSYPPDPGAILVFLPGLAEIKMLYEQLQS--NSLFNNRRSNRCVVH 78
Query: 99 PLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKV 158
PL+S+L QQ +F KP G+ K+++STNIAETS+TID VV+VID G K+K
Sbjct: 79 PLHSSLSSEEQQAVFV-----KPPVGV-TKIIISTNIAETSITIDDVVYVIDSGKMKEKR 132
Query: 159 YNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
Y+ +ESL + +S+A+ G CF
Sbjct: 133 YDASKGMESLEDTFVSQANALQRKGRAGRVTSGVCF 168
Score = 130 (50.8 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 39/116 (33%), Positives = 61/116 (52%)
Query: 144 GVVFVIDPGFAKQKVYNPRIRVESL---------LVSPISKASXXXXXXXXXXTRPGKCF 194
G + V PG A+ K+ +++ SL +V P+ + P
Sbjct: 42 GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVVHPLHSSLSSEEQQAVFVKPPVGVT 101
Query: 195 RYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+ +++STNIAETS+TID VV+VID G K+K Y+ +ESL + +S+A+A QR
Sbjct: 102 K--IIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQR 155
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 183 (69.5 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 59/183 (32%), Positives = 95/183 (51%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPE--------PERDY------------LEAAIRTVVQI 54
YF P++ VPG +PV+ +Y E R Y L+ V+QI
Sbjct: 646 YFGGCPVVKVPGFMYPVKEYYLEEILAKLGRHRHRHYEIKQSDDECVLDLDLITDLVLQI 705
Query: 55 HMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFE 114
E G +L FL G +EI+ +R+ ++ LG + +P++S +P QQ IF+
Sbjct: 706 DAHGE-PGGILCFLPGWQEIKGVQQRL---LEMLGSQNSRYLVLPVHSNIPMMDQQNIFQ 761
Query: 115 AAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPIS 174
P P G+ RK+V++TNIAETS+TI+ +V V+D G K++ Y+ + +V L +S
Sbjct: 762 RPP---P--GV-RKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVS 815
Query: 175 KAS 177
K++
Sbjct: 816 KSN 818
>UNIPROTKB|H7C109 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018693 InterPro:IPR011709 Pfam:PF07717
HGNC:HGNC:20086 ChiTaRS:DHX57 Ensembl:ENST00000452978
Uniprot:H7C109
Length = 665
Score = 176 (67.0 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 48/135 (35%), Positives = 75/135 (55%)
Query: 62 GDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCI--PLYSTLPPNLQQRIFEAAPAN 119
G +L+FL G EI+ ++++ ++L +C+ PL+S+L QQ +F
Sbjct: 172 GAILVFLPGLAEIKMLYEQLQS--NSLFNNRRSNRCVIHPLHSSLSSEEQQAVFV----- 224
Query: 120 KPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXX 179
KP G+ K+++STNIAETS+TID VV+VID G K+K Y+ +ESL + +S+A+
Sbjct: 225 KPPAGV-TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANAL 283
Query: 180 XXXXXXXXTRPGKCF 194
G CF
Sbjct: 284 QRKGRAGRVASGVCF 298
Score = 160 (61.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 71/272 (26%), Positives = 121/272 (44%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEP---ERDYLEAA---IRTVVQIHM-- 56
AT L YF++ P++ +PGRT PV+ F+ + R L+ +R++ QI
Sbjct: 25 ATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSMKQISKEK 84
Query: 57 ---------CEEVEGDVLL--FLTGQEEIEEACKRIKKEIDNL-----GPEAGELKCIPL 100
EEVE D+ L L Q+ +++A + + L G +K + +
Sbjct: 85 LKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMSI 144
Query: 101 YSTLPPNLQ--QRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKV 158
NL+ + + E K + G +V +AE + + + +
Sbjct: 145 MDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQL--------QSNSL 196
Query: 159 YNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVI 218
+N R R ++ P+ + P + +++STNIAETS+TID VV+VI
Sbjct: 197 FNNR-RSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTK--IIISTNIAETSITIDDVVYVI 253
Query: 219 DPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
D G K+K Y+ +ESL + +S+A+A QR
Sbjct: 254 DSGKMKEKRYDASKGMESLEDTFVSQANALQR 285
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 177 (67.4 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 71/245 (28%), Positives = 114/245 (46%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPE--PERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQE 72
YF + P++ + GR++PVE+F+ + E ++ Q + EE E + + +T +
Sbjct: 744 YFTHCPILRISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEE--ITINVTSKA 801
Query: 73 EIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVS 132
K+ ++ I + EL P Y Q I P +K N + +++V
Sbjct: 802 G---GVKKYQEYIPVQSGASPELN--PFYQKYSSRTQHAILYMNP-HKINLDLILELLVY 855
Query: 133 TNIAETSLTIDGVVFVIDPGFAK-QKVYN-----PRIRVESLLVSPI-SKASXXXXXXXX 185
+ + I+G V + PG A Q++Y+ R E V + S S
Sbjct: 856 LDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFYSERYQVIALHSVLSTQDQAAAF 915
Query: 186 XXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKA 245
PG R IV+ +TNIAET +TI VVFVID G K+ Y+ ++ SL+ + +SKA
Sbjct: 916 MFPPPG--VRKIVL-ATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKA 972
Query: 246 SAQQR 250
SA QR
Sbjct: 973 SALQR 977
Score = 164 (62.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 54/166 (32%), Positives = 81/166 (48%)
Query: 33 IFYTPEPERDYLEAAIRTVVQIHMCEE---VEGDVLLFLTGQEEIEEACKRIKKEIDNLG 89
I Y P + L+ + +V + + +EG VL+FL G I++ + +
Sbjct: 836 ILYM-NPHKINLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSD-RRFY 893
Query: 90 PEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVI 149
E ++ I L+S L Q F P P G+ RK+V++TNIAET +TI VVFVI
Sbjct: 894 SERYQV--IALHSVLSTQDQAAAFMFPP---P--GV-RKIVLATNIAETGITIPDVVFVI 945
Query: 150 DPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
D G K+ Y+ ++ SL+ + +SKAS R G CFR
Sbjct: 946 DTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFR 991
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 164 (62.8 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 56/175 (32%), Positives = 86/175 (49%)
Query: 38 EPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELK- 96
E + +EA ++ + ++ V G VL+FL G I K ++ + P G
Sbjct: 633 ETPLELIEALLKYIETLN----VPGAVLVFLPGWNLIYAMQKHLE-----MNPHFGSHSY 683
Query: 97 CI-PLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAK 155
CI PL+S +P + Q+++F+ P P+G I KV++STNIAETS+TI+ VV+VID K
Sbjct: 684 CILPLHSQIPRDEQRKVFD--PV--PDGII--KVILSTNIAETSITINDVVYVIDSCKQK 737
Query: 156 QKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLT 210
K++ + + SK + RPG CF + ET LT
Sbjct: 738 VKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFDKLETHLT 792
Score = 107 (42.7 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 36/118 (30%), Positives = 53/118 (44%)
Query: 139 SLTIDGVVFVIDPG----FAKQK--VYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGK 192
+L + G V V PG +A QK NP S + P+ P
Sbjct: 648 TLNVPGAVLVFLPGWNLIYAMQKHLEMNPHFGSHSYCILPLHSQIPRDEQRKVFDPVPDG 707
Query: 193 CFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+ V++STNIAETS+TI+ VV+VID K K++ + + SK + +QR
Sbjct: 708 IIK--VILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQR 763
Score = 63 (27.2 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFY 35
+YF N P++ V GRT PV+ +Y
Sbjct: 555 EYFFNCPIIEVFGRTFPVQEYY 576
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 163 (62.4 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 51/169 (30%), Positives = 82/169 (48%)
Query: 42 DYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLY 101
+ +EA ++ + ++ V G VL+FL G I K ++ D G ++ +PL+
Sbjct: 636 ELIEALLKYIETLN----VPGAVLVFLPGWNLIYTMQKHLEMNPD-FGSHRYQI--LPLH 688
Query: 102 STLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNP 161
S +P Q+++F+ PA G+ KV++STNIAETS+TI+ VV+VID K K++
Sbjct: 689 SQIPREEQRKVFDPVPA-----GV-TKVILSTNIAETSITINDVVYVIDSCKQKVKLFTA 742
Query: 162 RIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLT 210
+ + SK + RPG CF ET +T
Sbjct: 743 HNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMT 791
Score = 63 (27.2 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFY 35
+YF N P++ V GRT+PV+ ++
Sbjct: 554 EYFFNCPIIEVYGRTYPVQEYF 575
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 176 (67.0 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 56/184 (30%), Positives = 97/184 (52%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPE-----PERDYL----------EAAIR----TVVQI 54
+YF P++ VPG +PV+ Y + + YL E A+ T + +
Sbjct: 573 RYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVL 632
Query: 55 HMCEEVE-GDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIF 113
H+ E G +L FL G +EI+ +R+++ LG + +P++S +P Q+ IF
Sbjct: 633 HIDARGEPGGILCFLPGWQEIKGVQQRLQEA---LGMHESKYLILPVHSNIPMMDQKAIF 689
Query: 114 EAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPI 173
+ P G+ RK+V++TNIAETS+TI+ +V V+D G K++ Y+ + +V L +
Sbjct: 690 QQPPV-----GV-RKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 743
Query: 174 SKAS 177
S+A+
Sbjct: 744 SRAN 747
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 176 (67.0 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 56/184 (30%), Positives = 97/184 (52%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYTPE-----PERDYL----------EAAIR----TVVQI 54
+YF P++ VPG +PV+ Y + + YL E A+ T + +
Sbjct: 601 RYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVL 660
Query: 55 HMCEEVE-GDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIF 113
H+ E G +L FL G +EI+ +R+++ LG + +P++S +P Q+ IF
Sbjct: 661 HIDARGEPGGILCFLPGWQEIKGVQQRLQEA---LGMHESKYLILPVHSNIPMMDQKAIF 717
Query: 114 EAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPI 173
+ P G+ RK+V++TNIAETS+TI+ +V V+D G K++ Y+ + +V L +
Sbjct: 718 QQPPV-----GV-RKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 771
Query: 174 SKAS 177
S+A+
Sbjct: 772 SRAN 775
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 176 (67.0 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 55/184 (29%), Positives = 96/184 (52%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYT------------PEPERDY-------LEAAIRTVVQI 54
+YF P++ VPG +PV+ Y P R + L+ + T + +
Sbjct: 629 RYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVL 688
Query: 55 HMCEEVE-GDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIF 113
H+ E G +L FL G +EI+ +R+++ LG + +P++S +P Q+ IF
Sbjct: 689 HIDARGEPGGILCFLPGWQEIKGVQQRLQEA---LGMHESKYLILPVHSNIPMMDQKAIF 745
Query: 114 EAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPI 173
+ P G+ RK+V++TNIAETS+TI+ +V V+D G K++ Y+ + +V L +
Sbjct: 746 QQPPV-----GV-RKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 799
Query: 174 SKAS 177
S+A+
Sbjct: 800 SRAN 803
>UNIPROTKB|H7C5F5 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018452 EMBL:AC134026 HGNC:HGNC:14410
ProteinModelPortal:H7C5F5 Ensembl:ENST00000469977 Uniprot:H7C5F5
Length = 188
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 36/97 (37%), Positives = 58/97 (59%)
Query: 98 IPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQK 157
IPL+S +P Q ++F+ P P G+ RK+V++TNIAETS+TID VV+VID G K+
Sbjct: 2 IPLHSLMPTVNQTQVFKRTP---P--GV-RKIVIATNIAETSITIDDVVYVIDGGKIKET 55
Query: 158 VYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCF 194
++ + + ++ +SKA+ +PG C+
Sbjct: 56 HFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCY 92
Score = 121 (47.7 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 24/53 (45%), Positives = 39/53 (73%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+V++TNIAETS+TID VV+VID G K+ ++ + + ++ +SKA+A+QR
Sbjct: 27 IVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQR 79
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 176 (67.0 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 48/135 (35%), Positives = 75/135 (55%)
Query: 62 GDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCI--PLYSTLPPNLQQRIFEAAPAN 119
G +L+FL G EI+ ++++ ++L +C+ PL+S+L QQ +F
Sbjct: 848 GAILVFLPGLAEIKMLYEQLQS--NSLFNNRRSNRCVIHPLHSSLSSEEQQAVFV----- 900
Query: 120 KPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXX 179
KP G+ K+++STNIAETS+TID VV+VID G K+K Y+ +ESL + +S+A+
Sbjct: 901 KPPAGV-TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANAL 959
Query: 180 XXXXXXXXTRPGKCF 194
G CF
Sbjct: 960 QRKGRAGRVASGVCF 974
Score = 160 (61.4 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 71/272 (26%), Positives = 121/272 (44%)
Query: 5 ATRRQHLTRQYFDNAPLMNVPGRTHPVEIFYTPEP---ERDYLEAA---IRTVVQIHM-- 56
AT L YF++ P++ +PGRT PV+ F+ + R L+ +R++ QI
Sbjct: 701 ATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSMKQISKEK 760
Query: 57 ---------CEEVEGDVLL--FLTGQEEIEEACKRIKKEIDNL-----GPEAGELKCIPL 100
EEVE D+ L L Q+ +++A + + L G +K + +
Sbjct: 761 LKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMSI 820
Query: 101 YSTLPPNLQ--QRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKV 158
NL+ + + E K + G +V +AE + + + +
Sbjct: 821 MDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQL--------QSNSL 872
Query: 159 YNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVI 218
+N R R ++ P+ + P + +++STNIAETS+TID VV+VI
Sbjct: 873 FNNR-RSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTK--IIISTNIAETSITIDDVVYVI 929
Query: 219 DPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
D G K+K Y+ +ESL + +S+A+A QR
Sbjct: 930 DSGKMKEKRYDASKGMESLEDTFVSQANALQR 961
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 176 (67.0 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 49/181 (27%), Positives = 87/181 (48%)
Query: 33 IFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRI---KKEIDNLG 89
+FY + V+Q V G +L+FL G E+I++ K I K + N+
Sbjct: 616 LFYGSSSNNSVDYVLLDQVIQYLADSPVFGTILVFLPGYEDIQQMLKAIDCWKNSLKNMK 675
Query: 90 PEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVI 149
+ +PL+S + IF++ P + RK++++TNIAE S+TI+ V+FV+
Sbjct: 676 ----NVIVLPLHSQMTSINHGDIFKSVPKDT------RKIILATNIAEASITIEDVIFVV 725
Query: 150 DPGFAKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR-YIVVVSTNIAETS 208
D G K+K ++ ++ +L V PI++++ G C R Y ++ ET
Sbjct: 726 DTGKVKEKSFDHEAKLSTLTVKPIARSNADQRSGRAGRVANGYCIRLYTEQEYNSMPETQ 785
Query: 209 L 209
+
Sbjct: 786 I 786
Score = 129 (50.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 22/54 (40%), Positives = 41/54 (75%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRA 251
++++TNIAE S+TI+ V+FV+D G K+K ++ ++ +L V PI++++A QR+
Sbjct: 705 IILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTLTVKPIARSNADQRS 758
Score = 36 (17.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 22/120 (18%), Positives = 48/120 (40%)
Query: 11 LTRQYFDNAPL--MNVPGRTHPVEIFYTPE--PERDYLEAAIRTVVQIHMCEEVEGDVLL 66
L YF+N + + + R V++FY + Y + EE + +
Sbjct: 344 LFSNYFENHSMDVIRIESRAFDVKVFYLDQILAMTGYQPPESKAFFSTAEYEEEDWKDEI 403
Query: 67 FLTGQEEIEEACKRIK-KEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGI 125
+EE ++A +R + L ++ ++ P +++R + + P + P+G I
Sbjct: 404 EAVEREEKDKAKQRAADSSLSTLSKPVTKMAANTKRNS--P-IEEREWTSGPCSTPDGDI 460
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 161 (61.7 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 51/171 (29%), Positives = 83/171 (48%)
Query: 42 DYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGE--LKCIP 99
+ +EA ++ + ++ V G VL+FL G I K ++ + P G + +P
Sbjct: 627 ELIEALLKYIETLN----VPGAVLVFLPGWNLIYTMQKHLE-----MNPHFGNHRYQILP 677
Query: 100 LYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVY 159
L+S +P Q+++F+ PA G+ KV++STNIAETS+TI+ VV+VID K K++
Sbjct: 678 LHSQIPREEQRKVFDPVPA-----GV-TKVILSTNIAETSITINDVVYVIDSCKQKVKLF 731
Query: 160 NPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRYIVVVSTNIAETSLT 210
+ + SK + RPG CF + ET +T
Sbjct: 732 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMT 782
Score = 63 (27.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFY 35
+YF N P++ V GRT+PV+ ++
Sbjct: 549 EYFFNCPIIEVYGRTYPVQEYF 570
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 175 (66.7 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 54/184 (29%), Positives = 96/184 (52%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYT------------PEPERDY-------LEAAIRTVVQI 54
+YF P++ VPG +PV+ Y P R + L+ + T + +
Sbjct: 601 RYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVL 660
Query: 55 HMCEEVE-GDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIF 113
H+ E G +L FL G +EI+ +R+++ LG + +P++S +P Q+ IF
Sbjct: 661 HIDARGEPGGILCFLPGWQEIKGVQQRLQEA---LGMHESKYLILPVHSNIPMMDQKAIF 717
Query: 114 EAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPI 173
+ P G+ RK+V++TNIAETS+T++ +V V+D G K++ Y+ + +V L +
Sbjct: 718 QQPPV-----GV-RKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 771
Query: 174 SKAS 177
S+A+
Sbjct: 772 SRAN 775
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 175 (66.7 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 71/252 (28%), Positives = 111/252 (44%)
Query: 13 RQYFDNAPLMNVPGRTHPVEIFYTPE-PERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQ 71
R + P++ V R V + + P DY R + +IH G +L+FLTGQ
Sbjct: 421 RLFSSPPPVIKVEARQFAVTVHFNKRTPMDDYTGETFRKICKIHRMLP-PGGILVFLTGQ 479
Query: 72 EEIEEACKRIKKEI---------DNLGPEAG--ELKCIPLYSTLPPNLQQRIFEAAPANK 120
E+ C+R++K D + E + K + P + + A P ++
Sbjct: 480 AEVHSVCRRLRKAFPYKPNREHTDMMETEEDLKKSKRAKKKNVSLPRINLDNYSALPVDE 539
Query: 121 PNGGIGRKVVVSTNIAETSLTIDGVVFVID-PGFAKQKVYNPRIRVESLLVSPISKASXX 179
G R+ + + E S D + + D P ++ +P I L V P+ S
Sbjct: 540 --GDEDRQAGIDEDDGEGS---DLELELGDHPDTDHEEKADPSI---PLYVLPLY--SLL 589
Query: 180 XXXXXXXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 239
RP + VV+TN+AETSLTI G+ +V+D G K++ Y+ V S V
Sbjct: 590 APEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDCGRVKKRFYDRVTGVSSFKV 649
Query: 240 SPISKASAQQRA 251
+ IS+ASA QRA
Sbjct: 650 TWISQASANQRA 661
Score = 173 (66.0 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 41/101 (40%), Positives = 55/101 (54%)
Query: 95 LKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFA 154
L +PLYS L P Q ++F PA R VV+TN+AETSLTI G+ +V+D G
Sbjct: 580 LYVLPLYSLLAPEQQAKVFRPPPAGS------RLCVVATNVAETSLTIPGIKYVVDCGRV 633
Query: 155 KQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 195
K++ Y+ V S V+ IS+AS T PG C+R
Sbjct: 634 KKRFYDRVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYR 674
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 175 (66.7 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 55/184 (29%), Positives = 96/184 (52%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYT------------PEPERDY-------LEAAIRTVVQI 54
+YF P++ VPG +PV+ Y P R + L+ + T + +
Sbjct: 627 RYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVL 686
Query: 55 HMCEEVE-GDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIF 113
H+ E G +L FL G +EI+ +R+++ LG + +P++S +P Q+ IF
Sbjct: 687 HIDARGEPGGILCFLPGWQEIKGVQQRLQEA---LGMHESKYLILPVHSNIPMMDQKAIF 743
Query: 114 EAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPI 173
+ P G+ RK+V++TNIAETS+TI+ +V V+D G K++ Y+ + +V L +
Sbjct: 744 QQPPI-----GV-RKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 797
Query: 174 SKAS 177
S+A+
Sbjct: 798 SRAN 801
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 175 (66.7 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 55/184 (29%), Positives = 96/184 (52%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYT------------PEPERDY-------LEAAIRTVVQI 54
+YF P++ VPG +PV+ Y P R + L+ + T + +
Sbjct: 627 RYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVL 686
Query: 55 HMCEEVE-GDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIF 113
H+ E G +L FL G +EI+ +R+++ LG + +P++S +P Q+ IF
Sbjct: 687 HIDARGEPGGILCFLPGWQEIKGVQQRLQEA---LGMHESKYLILPVHSNIPMMDQKAIF 743
Query: 114 EAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPI 173
+ P G+ RK+V++TNIAETS+TI+ +V V+D G K++ Y+ + +V L +
Sbjct: 744 QQPPI-----GV-RKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 797
Query: 174 SKAS 177
S+A+
Sbjct: 798 SRAN 801
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 175 (66.7 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 54/184 (29%), Positives = 96/184 (52%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYT------------PEPERDY-------LEAAIRTVVQI 54
+YF P++ VPG +PV+ Y P R + L+ + T + +
Sbjct: 629 RYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVL 688
Query: 55 HMCEEVE-GDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIF 113
H+ E G +L FL G +EI+ +R+++ LG + +P++S +P Q+ IF
Sbjct: 689 HIDARGEPGGILCFLPGWQEIKGVQQRLQEA---LGMHESKYLILPVHSNIPMMDQKAIF 745
Query: 114 EAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPI 173
+ P G+ RK+V++TNIAETS+T++ +V V+D G K++ Y+ + +V L +
Sbjct: 746 QQPPV-----GV-RKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 799
Query: 174 SKAS 177
S+A+
Sbjct: 800 SRAN 803
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 175 (66.7 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 70/245 (28%), Positives = 115/245 (46%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPE--PERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQE 72
YF + P++ + GR++PVE+F+ + E ++ Q + EE E + + +T +
Sbjct: 745 YFTHCPILRISGRSYPVEVFHLEDIVEETGFILEKDSEYCQKFLEEEEE--ITINVTSKA 802
Query: 73 EIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVVS 132
K+ ++ I + EL P Y Q + P +K N + +++V
Sbjct: 803 G---GIKKYQECIPVQSGASPELS--PFYQKYSSRTQYAVLYMNP-HKINLDLILELLVY 856
Query: 133 TNIAETSLTIDGVVFVIDPGFAK-QKVYN-----PRIRVESL-LVSPISKASXXXXXXXX 185
+ + I+G V + PG A Q++Y+ R E L++ S S
Sbjct: 857 LDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYQLIALHSVLSTQDQAAAF 916
Query: 186 XXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKA 245
PG R IV+ +TNIAET +TI VVFVID G K+ Y+ ++ SL+ + +SKA
Sbjct: 917 MLPPPG--VRKIVL-ATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKA 973
Query: 246 SAQQR 250
SA QR
Sbjct: 974 SALQR 978
Score = 167 (63.8 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 50/136 (36%), Positives = 70/136 (51%)
Query: 60 VEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPAN 119
+EG VL+FL G I++ + + E +L I L+S L Q F P
Sbjct: 866 IEGAVLIFLPGLAHIQQLYDLLSND-RRFYSERYQL--IALHSVLSTQDQAAAFMLPP-- 920
Query: 120 KPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXX 179
P G+ RK+V++TNIAET +TI VVFVID G K+ Y+ ++ SL+ + +SKAS
Sbjct: 921 -P--GV-RKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASAL 976
Query: 180 XXXXXXXXTRPGKCFR 195
R G CFR
Sbjct: 977 QRQGRAGRVRDGFCFR 992
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 172 (65.6 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 51/145 (35%), Positives = 76/145 (52%)
Query: 55 HMCEEVEGD-VLLFLTGQEEIEEACKRI----KKEIDNLGPEAGELKCIPLYSTLPPNLQ 109
++C +G +L+FL G +EI RI K+ +DN + + L+S + Q
Sbjct: 525 NICNSSDGGAILIFLPGYDEIISLRDRIIFDDKRFVDNAH---SKYQVFMLHSNMQTLDQ 581
Query: 110 QRIFEAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLL 169
+ + + P+ GI RK+++STNIAETS+T++ VVFVID G K+K ++ V L
Sbjct: 582 KNVLKTPPS-----GI-RKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLK 635
Query: 170 VSPISKASXXXXXXXXXXTRPGKCF 194
ISKAS RPG CF
Sbjct: 636 TVWISKASAIQRRGRAGRCRPGVCF 660
Score = 119 (46.9 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 198 VVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 250
+++STNIAETS+T++ VVFVID G K+K ++ V L ISKASA QR
Sbjct: 595 IILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTVWISKASAIQR 647
Score = 41 (19.5 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 14 QYFDNAPLMNVPGRTHPV-EIF 34
+YF + P++++ GR V E+F
Sbjct: 268 KYFGSCPVIHIQGRPFEVKEMF 289
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 174 (66.3 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 54/184 (29%), Positives = 96/184 (52%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYT------------PEPERDY-------LEAAIRTVVQI 54
+YF P++ VPG +PV+ Y P R + L+ + T + +
Sbjct: 601 RYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVL 660
Query: 55 HMCEEVE-GDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIF 113
H+ E G +L FL G +EI+ +R+++ LG + +P++S +P Q+ IF
Sbjct: 661 HIDARGEPGGILCFLPGWQEIKGVQQRLQEA---LGMHESKYLILPVHSNIPMMDQKAIF 717
Query: 114 EAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPI 173
+ P G+ RK+V++TNIAETS+T++ +V V+D G K++ Y+ + +V L +
Sbjct: 718 QQPPL-----GV-RKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 771
Query: 174 SKAS 177
S+A+
Sbjct: 772 SRAN 775
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 174 (66.3 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 54/184 (29%), Positives = 96/184 (52%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYT------------PEPERDY-------LEAAIRTVVQI 54
+YF P++ VPG +PV+ Y P R + L+ + T + +
Sbjct: 601 RYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVL 660
Query: 55 HMCEEVE-GDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIF 113
H+ E G +L FL G +EI+ +R+++ LG + +P++S +P Q+ IF
Sbjct: 661 HIDARGEPGGILCFLPGWQEIKGVQQRLQEA---LGMHESKYLILPVHSNIPMMDQKAIF 717
Query: 114 EAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPI 173
+ P G+ RK+V++TNIAETS+T++ +V V+D G K++ Y+ + +V L +
Sbjct: 718 QQPPL-----GV-RKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 771
Query: 174 SKAS 177
S+A+
Sbjct: 772 SRAN 775
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 174 (66.3 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 54/184 (29%), Positives = 96/184 (52%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYT------------PEPERDY-------LEAAIRTVVQI 54
+YF P++ VPG +PV+ Y P R + L+ + T + +
Sbjct: 624 RYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVL 683
Query: 55 HMCEEVE-GDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIF 113
H+ E G +L FL G +EI+ +R+++ LG + +P++S +P Q+ IF
Sbjct: 684 HIDARGEPGGILCFLPGWQEIKGVQQRLQEA---LGMHESKYLILPVHSNIPMMDQKAIF 740
Query: 114 EAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPI 173
+ P G+ RK+V++TNIAETS+T++ +V V+D G K++ Y+ + +V L +
Sbjct: 741 QQPPL-----GV-RKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 794
Query: 174 SKAS 177
S+A+
Sbjct: 795 SRAN 798
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 174 (66.3 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 54/184 (29%), Positives = 96/184 (52%)
Query: 14 QYFDNAPLMNVPGRTHPVEIFYT------------PEPERDY-------LEAAIRTVVQI 54
+YF P++ VPG +PV+ Y P R + L+ + T + +
Sbjct: 629 RYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVL 688
Query: 55 HMCEEVE-GDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIF 113
H+ E G +L FL G +EI+ +R+++ LG + +P++S +P Q+ IF
Sbjct: 689 HIDARGEPGGILCFLPGWQEIKGVQQRLQEA---LGMHESKYLILPVHSNIPMMDQKAIF 745
Query: 114 EAAPANKPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPI 173
+ P G+ RK+V++TNIAETS+T++ +V V+D G K++ Y+ + +V L +
Sbjct: 746 QQPPL-----GV-RKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 799
Query: 174 SKAS 177
S+A+
Sbjct: 800 SRAN 803
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 174 (66.3 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 72/246 (29%), Positives = 116/246 (47%)
Query: 15 YFDNAPLMNVPGRTHPVEIFYTPE--PERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQE 72
YF + P++ + GR++PVE+F+ + E ++ Q + EE E + + +T +
Sbjct: 742 YFTHCPILRISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEE--ITINVTSKA 799
Query: 73 EIEEACKRIKKEID-NLGPEAGELKCIPLYSTLPPNLQQRIFEAAPANKPNGGIGRKVVV 131
K+ ++ I N G A +L P Y Q I P +K N + ++++
Sbjct: 800 G---GIKKHQEYIPVNTGSSA-DLN--PFYQKYSNRTQHAILYMNP-HKINLDLILELLI 852
Query: 132 STNIAETSLTIDGVVFVIDPGFAK-QKVYN-----PRIRVESLLVSPI-SKASXXXXXXX 184
+ + I+G V + PG A Q++Y+ R E V + S S
Sbjct: 853 YLDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAA 912
Query: 185 XXXTRPGKCFRYIVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISK 244
PG R IV+ +TNIAET +TI VVFVID G K+ Y+ ++ SL+ + +SK
Sbjct: 913 FTLPPPG--VRKIVL-ATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSK 969
Query: 245 ASAQQR 250
ASA QR
Sbjct: 970 ASALQR 975
Score = 167 (63.8 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 50/136 (36%), Positives = 69/136 (50%)
Query: 60 VEGDVLLFLTGQEEIEEACKRIKKEIDNLGPEAGELKCIPLYSTLPPNLQQRIFEAAPAN 119
+EG VL+FL G I++ + + E K I L+S L Q F P
Sbjct: 863 IEGAVLIFLPGLAHIQQLYDLLSTD-RRFFSE--RYKVIALHSILSTQDQAAAFTLPP-- 917
Query: 120 KPNGGIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASXX 179
P G+ RK+V++TNIAET +TI VVFVID G K+ Y+ ++ SL+ + +SKAS
Sbjct: 918 -P--GV-RKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASAL 973
Query: 180 XXXXXXXXTRPGKCFR 195
R G CFR
Sbjct: 974 QRQGRAGRVRDGFCFR 989
WARNING: HSPs involving 37 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 251 241 0.00094 113 3 11 22 0.42 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 287
No. of states in DFA: 566 (60 KB)
Total size of DFA: 153 KB (2092 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 20.52u 0.09s 20.61t Elapsed: 00:00:15
Total cpu time: 20.57u 0.09s 20.66t Elapsed: 00:00:17
Start: Thu Aug 15 11:34:20 2013 End: Thu Aug 15 11:34:37 2013
WARNINGS ISSUED: 2