BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2960
(405 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 305 bits (780), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 156/319 (48%), Positives = 204/319 (63%), Gaps = 8/319 (2%)
Query: 76 LVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPG 135
LVY HG P +VV ++N L +V+ +V VKML AP+NP+DIN IQG Y + P LPAV G
Sbjct: 17 LVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGG 76
Query: 136 FXXXXXXXXXXXXXXXLAVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGIT 195
L GD VIP LGTWR F+ + L++VP DI L + +
Sbjct: 77 NEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLG 136
Query: 196 SNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLK 255
NPCTAYRML D+ L PGD VIQN +NS GQ VIQIA GL+TIN+VR+R DI KL
Sbjct: 137 VNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLS 196
Query: 256 SYLKSLGADYVFTEEELR-----NISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMV 310
LKSLGA++V TEEELR N +D +P+P+LALNCVGG S+T LLR L G MV
Sbjct: 197 DRLKSLGAEHVITEEELRRPEMKNFFKD--MPQPRLALNCVGGKSSTELLRQLARGGTMV 254
Query: 311 TYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAA 370
TYGGM+++PV S IFKD+ LRG W+++W+K++ + K ++ L +++R G+L A
Sbjct: 255 TYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPD-QFKELILTLCDLIRRGQLTA 313
Query: 371 PAHKFVTLKNFQEALMNTM 389
PA V L+++Q AL +M
Sbjct: 314 PACSQVPLQDYQSALEASM 332
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 304 bits (779), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 156/319 (48%), Positives = 204/319 (63%), Gaps = 8/319 (2%)
Query: 76 LVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPG 135
LVY HG P +VV ++N L +V+ +V VKML AP+NP+DIN IQG Y + P LPAV G
Sbjct: 30 LVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGG 89
Query: 136 FXXXXXXXXXXXXXXXLAVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGIT 195
L GD VIP LGTWR F+ + L++VP DI L + +
Sbjct: 90 NEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLG 149
Query: 196 SNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLK 255
NPCTAYRML D+ L PGD VIQN +NS GQ VIQIA GL+TIN+VR+R DI KL
Sbjct: 150 VNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLS 209
Query: 256 SYLKSLGADYVFTEEELR-----NISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMV 310
LKSLGA++V TEEELR N +D +P+P+LALNCVGG S+T LLR L G MV
Sbjct: 210 DRLKSLGAEHVITEEELRRPEMKNFFKD--MPQPRLALNCVGGKSSTELLRQLARGGTMV 267
Query: 311 TYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAA 370
TYGGM+++PV S IFKD+ LRG W+++W+K++ + K ++ L +++R G+L A
Sbjct: 268 TYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPD-QFKELILTLCDLIRRGQLTA 326
Query: 371 PAHKFVTLKNFQEALMNTM 389
PA V L+++Q AL +M
Sbjct: 327 PACSQVPLQDYQSALEASM 345
>pdb|1N9G|B Chain B, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|D Chain D, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|E Chain E, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 201 bits (510), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 127/329 (38%), Positives = 179/329 (54%), Gaps = 37/329 (11%)
Query: 73 ANKLVYNQHGTPLRVVTVENETLN--SVQKHEVVVKMLVAPVNPADINTIQGVYPIKP-- 128
A ++Y QHG P V+ ++ ++ ++ +EV+VK L +PVNP+DIN IQGVYP KP
Sbjct: 26 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 85
Query: 129 ------TLPAVP-GFXXXXXXXXXXXXXXXLAVGDHVIPDTQHLGTWRNYGKFNHDVLMK 181
T PA P G L GD VIP + GTWR + N D +K
Sbjct: 86 TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 145
Query: 182 VPK-----------DIALTEISGITSNPCTAYRMLKDYNSLSPG-DVVIQNGANSACGQN 229
+P + + + + I+ NP TAY ML Y L+PG D IQNG SA G+
Sbjct: 146 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 205
Query: 230 VIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRD----------A 279
QI + +I+++R+R ++D++ + LK LGA V TE++ N SR+
Sbjct: 206 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQ--NNSREFGPTIKEWIKQ 263
Query: 280 SIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWM 339
S + KLALNCVGG S+T + R L + G+M+TYGGMS +PV IPTS +IFK+ T G W+
Sbjct: 264 SGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWV 323
Query: 340 TRWQKENKESAERKSMMNELTEMMRTGKL 368
T K NKE + S +N++ GKL
Sbjct: 324 TELLKNNKEL--KTSTLNQIIAWYEEGKL 350
>pdb|1GU7|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GU7|B Chain B, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GUF|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GUF|B Chain B, Enoyl Thioester Reductase From Candida Tropicalis
Length = 364
Score = 201 bits (510), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 127/329 (38%), Positives = 179/329 (54%), Gaps = 37/329 (11%)
Query: 73 ANKLVYNQHGTPLRVVTVENETLN--SVQKHEVVVKMLVAPVNPADINTIQGVYPIKP-- 128
A ++Y QHG P V+ ++ ++ ++ +EV+VK L +PVNP+DIN IQGVYP KP
Sbjct: 4 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63
Query: 129 ------TLPAVP-GFXXXXXXXXXXXXXXXLAVGDHVIPDTQHLGTWRNYGKFNHDVLMK 181
T PA P G L GD VIP + GTWR + N D +K
Sbjct: 64 TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123
Query: 182 VPK-----------DIALTEISGITSNPCTAYRMLKDYNSLSPG-DVVIQNGANSACGQN 229
+P + + + + I+ NP TAY ML Y L+PG D IQNG SA G+
Sbjct: 124 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 183
Query: 230 VIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRD----------A 279
QI + +I+++R+R ++D++ + LK LGA V TE++ N SR+
Sbjct: 184 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQ--NNSREFGPTIKEWIKQ 241
Query: 280 SIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWM 339
S + KLALNCVGG S+T + R L + G+M+TYGGMS +PV IPTS +IFK+ T G W+
Sbjct: 242 SGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWV 301
Query: 340 TRWQKENKESAERKSMMNELTEMMRTGKL 368
T K NKE + S +N++ GKL
Sbjct: 302 TELLKNNKEL--KTSTLNQIIAWYEEGKL 328
>pdb|1H0K|A Chain A, Enoyl Thioester Reductase 2
pdb|1H0K|B Chain B, Enoyl Thioester Reductase 2
Length = 364
Score = 197 bits (501), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 122/327 (37%), Positives = 176/327 (53%), Gaps = 33/327 (10%)
Query: 73 ANKLVYNQHGTPLRVVTVENETLN--SVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTL 130
A ++Y QHG P V+ ++ ++ ++ +EV+VK L +P+NP+DIN IQGVYP KP
Sbjct: 4 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAK 63
Query: 131 --------PAVP-GFXXXXXXXXXXXXXXXLAVGDHVIPDTQHLGTWRNYGKFNHDVLMK 181
PA P G L GD VIP + GTWR + N D +K
Sbjct: 64 TTGFGTAEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123
Query: 182 VPK-----------DIALTEISGITSNPCTAYRMLKDYNSLSPG-DVVIQNGANSACGQN 229
+P + + + + I+ NP TAY ML Y L+PG D IQNG SA G+
Sbjct: 124 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 183
Query: 230 VIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPK------ 283
QI + +I+++R+R ++D++ + LK LGA V TE++ + +I +
Sbjct: 184 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTIKEWIKQSG 243
Query: 284 --PKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTR 341
KLALNCVGG S+T + R L + G+M+TYGGMS +PV IPTS +IFK+ T G W+T
Sbjct: 244 GEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTE 303
Query: 342 WQKENKESAERKSMMNELTEMMRTGKL 368
K NKE + S +N++ GKL
Sbjct: 304 LLKNNKEL--KTSTLNQIIAWYEEGKL 328
>pdb|1N9G|A Chain A, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|C Chain C, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|F Chain F, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 197 bits (501), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 122/327 (37%), Positives = 176/327 (53%), Gaps = 33/327 (10%)
Query: 73 ANKLVYNQHGTPLRVVTVENETLN--SVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTL 130
A ++Y QHG P V+ ++ ++ ++ +EV+VK L +P+NP+DIN IQGVYP KP
Sbjct: 26 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAK 85
Query: 131 --------PAVP-GFXXXXXXXXXXXXXXXLAVGDHVIPDTQHLGTWRNYGKFNHDVLMK 181
PA P G L GD VIP + GTWR + N D +K
Sbjct: 86 TTGFGTAEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 145
Query: 182 VPK-----------DIALTEISGITSNPCTAYRMLKDYNSLSPG-DVVIQNGANSACGQN 229
+P + + + + I+ NP TAY ML Y L+PG D IQNG SA G+
Sbjct: 146 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 205
Query: 230 VIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPK------ 283
QI + +I+++R+R ++D++ + LK LGA V TE++ + +I +
Sbjct: 206 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTIKEWIKQSG 265
Query: 284 --PKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTR 341
KLALNCVGG S+T + R L + G+M+TYGGMS +PV IPTS +IFK+ T G W+T
Sbjct: 266 GEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTE 325
Query: 342 WQKENKESAERKSMMNELTEMMRTGKL 368
K NKE + S +N++ GKL
Sbjct: 326 LLKNNKEL--KTSTLNQIIAWYEEGKL 350
>pdb|1GYR|A Chain A, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
pdb|1GYR|B Chain B, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
pdb|1GYR|C Chain C, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
Length = 364
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/329 (38%), Positives = 178/329 (54%), Gaps = 37/329 (11%)
Query: 73 ANKLVYNQHGTPLRVVTVENETLN--SVQKHEVVVKMLVAPVNPADINTIQGVYPIKP-- 128
A ++Y QHG P V+ ++ ++ ++ +EV+VK L +PVNP+DIN IQGV P KP
Sbjct: 4 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVNPSKPAK 63
Query: 129 ------TLPAVP-GFXXXXXXXXXXXXXXXLAVGDHVIPDTQHLGTWRNYGKFNHDVLMK 181
T PA P G L GD VIP + GTWR + N D +K
Sbjct: 64 TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123
Query: 182 VPK-----------DIALTEISGITSNPCTAYRMLKDYNSLSPG-DVVIQNGANSACGQN 229
+P + + + + I+ NP TAY ML Y L+PG D IQNG SA G+
Sbjct: 124 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 183
Query: 230 VIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRD----------A 279
QI + +I+++R+R ++D++ + LK LGA V TE++ N SR+
Sbjct: 184 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQ--NNSREFGPTIKEWIKQ 241
Query: 280 SIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWM 339
S + KLALNCVGG S+T + R L + G+M+TYGGMS +PV IPTS +IFK+ T G W+
Sbjct: 242 SGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWV 301
Query: 340 TRWQKENKESAERKSMMNELTEMMRTGKL 368
T K NKE + S +N++ GKL
Sbjct: 302 TELLKNNKEL--KTSTLNQIIAWYEEGKL 328
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 131/292 (44%), Gaps = 31/292 (10%)
Query: 72 LANKLV-YNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTL 130
L KL+ +++ G P V+ VE + + ++ +EV V+MLV P+NP+D+ I G Y + L
Sbjct: 3 LHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPL 62
Query: 131 PAVPGFXXXXXXXXXXXXXXXLAVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTE 190
P +PG+ +G V+P + GTW+ Y K + D ++ +P I
Sbjct: 63 PNIPGYEGVGIVENVGAFVSRELIGKRVLP-LRGEGTWQEYVKTSADFVVPIPDSIDDFT 121
Query: 191 ISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD 250
+ + NP TA+ + +L DV++ N SA G Q+++ + I + RN
Sbjct: 122 AAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRN--- 178
Query: 251 IDKLKSYLKSLGADYVF---------TEEELRN-ISRDASIPKPKLALNCVGGNSATNLL 300
+K L LGA YV T EL N I DA A++ +GG L
Sbjct: 179 -NKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADA-------AIDSIGGPDGNELA 230
Query: 301 RTLVSKGVMVTYG---GMSREPVQIPTSAFIFKDITLRGHWMT-----RWQK 344
+L G +T G G+ +I T A + +I HW +WQ+
Sbjct: 231 FSLRPNGHFLTIGLLSGIQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQE 282
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 79/203 (38%), Gaps = 20/203 (9%)
Query: 99 QKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFXXXXXXXXXXXXXXXLAVGDHV 158
+ H+V++K+ VNP + G Y KP LP PG GD V
Sbjct: 56 KDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRV 115
Query: 159 IPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVI 218
+ G + Y + K+P+ + + + I TAYR L + G+ V+
Sbjct: 116 FTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVL 175
Query: 219 QNGANSACGQNVIQIARHWGLKTINIV--------------------RNRDDIDKLKSYL 258
+GA+ G QIAR +GLK + R + IDK+K Y+
Sbjct: 176 VHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYV 235
Query: 259 KSLGADYVFTEEELRNISRDASI 281
G D + N+S+D S+
Sbjct: 236 GEKGIDIIIEMLANVNLSKDLSL 258
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 95/237 (40%), Gaps = 35/237 (14%)
Query: 172 GKFNHDVLMKVPKDIALTEISGITSNP-CTAYRMLKDYNSLSPGDVVIQNGANSACGQNV 230
GK +L + P + L+ G P TAY L + + G+ V+ + A A G V
Sbjct: 103 GKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVV 162
Query: 231 IQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFT-------EEELRNISRDASIPK 283
QIA+ G K + + + I +YLK +G D F EE L+ S D
Sbjct: 163 GQIAKLKGCKVVGAAGSDEKI----AYLKQIGFDAAFNYKTVNSLEEALKKASPDG---- 214
Query: 284 PKLALNCVGGNSATNLLRTLVSK----------GVMVTYGGMSREPVQIPTSAFIFKDIT 333
+C N L T++S+ G + Y M + P + I+K +
Sbjct: 215 ----YDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLR 270
Query: 334 LRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMS 390
+ G + RWQ + +E A R +L + + GK+ H +N A + ++
Sbjct: 271 IEGFIVYRWQGDVREKALR-----DLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLN 322
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 115/294 (39%), Gaps = 29/294 (9%)
Query: 99 QKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFXXXXXXXXXXXXXXXLAVGDHV 158
Q E+ +++ +N D+ QG P P VPGF +GD V
Sbjct: 29 QDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRV 88
Query: 159 IPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVI 218
+ + W + + K+P D++ +E + N TAY ML + +L G V+
Sbjct: 89 MAFVNY-NAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVL 147
Query: 219 QNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLK---SYLKSLGADYVFTEEELRNI 275
+ A GQ V Q+ T+ + + +K ++L ADYV +E++ I
Sbjct: 148 VHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSVTHLFDRNADYV---QEVKRI 204
Query: 276 SRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLR 335
S + + L+C+ G++ L L G + YG S V T +F +
Sbjct: 205 SAEGV----DIVLDCLCGDNTGKGLSLLKPLGTYILYG--SSNMVTGETKSF----FSFA 254
Query: 336 GHWMTRWQKEN----KESAERK-----SMMNELTEMMRTGKLAAPAHKFVTLKN 380
W WQ E K E K S++N L + R G + K + L N
Sbjct: 255 KSW---WQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYN 305
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 84/217 (38%), Gaps = 36/217 (16%)
Query: 77 VYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGF 136
V Q PL++ VE T++ EV+V++ V D++ G +P+KP LP +PG
Sbjct: 5 VVEQFKEPLKIKEVEKPTISY---GEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61
Query: 137 XXXXXXXXXXXXXXXLAVGDHV-IP----DTQHL----------------------GTWR 169
L VGD V IP H G +
Sbjct: 62 EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYA 121
Query: 170 NYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQN 229
Y + D ++K+P +++ E + I T Y+ LK PG+ V G G
Sbjct: 122 EYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALK-VTGAKPGEWVAIYGIGGL-GHV 179
Query: 230 VIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV 266
+Q A+ GL + + D D+ K LGAD V
Sbjct: 180 AVQYAKAMGLNVVAV----DIGDEKLELAKELGADLV 212
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 84/217 (38%), Gaps = 36/217 (16%)
Query: 77 VYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGF 136
V Q PL++ VE T++ EV+V++ V D++ G +P+KP LP +PG
Sbjct: 5 VVEQFKEPLKIKEVEKPTISY---GEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61
Query: 137 XXXXXXXXXXXXXXXLAVGDHV-IP----DTQHL----------------------GTWR 169
L VGD V IP H G +
Sbjct: 62 EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYA 121
Query: 170 NYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQN 229
Y + D ++K+P +++ E + I T Y+ LK PG+ V G G
Sbjct: 122 EYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALK-VTGAKPGEWVAIYGIGGF-GHV 179
Query: 230 VIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV 266
+Q A+ GL + + D D+ K LGAD V
Sbjct: 180 AVQYAKAMGLNVVAV----DIGDEKLELAKELGADLV 212
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 21/270 (7%)
Query: 102 EVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFXXXXXXXXXXXXXXXLAVGDHVIPD 161
EV++K+ + +N AD+ QG Y P + G G I D
Sbjct: 51 EVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQ----GHWKIGD 106
Query: 162 TQHL----GTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVV 217
T G Y +LM +P+ + LT+ + I TA+++L ++ GD V
Sbjct: 107 TAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYV 166
Query: 218 IQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTEEELRN 274
+ + S G IQ+ R G + ++ + + + G +Y F+E L+
Sbjct: 167 LIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLK- 225
Query: 275 ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPT-SAFIFKDIT 333
++ A + L L+C+GG+ + L G V YG M + P S +FK
Sbjct: 226 FTKGAGV---NLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFK--- 279
Query: 334 LRGHWMTRWQKENKESAERKSMMNELTEMM 363
RG +T + ++++ ++ ++N TE +
Sbjct: 280 -RGSLITSLLR-SRDNKYKQMLVNAFTEQI 307
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 114/275 (41%), Gaps = 21/275 (7%)
Query: 97 SVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFXXXXXXXXXXXXXXXLAVGD 156
S + EV++K+ + +N AD+ QG Y P + G G
Sbjct: 30 SPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQ----GH 85
Query: 157 HVIPDTQHL----GTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLS 212
I DT G Y +LM +P+ + LT+ + I TA+++L ++
Sbjct: 86 WKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQ 145
Query: 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTE 269
GD V+ + S G IQ+ R G + ++ + + + G +Y F+E
Sbjct: 146 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSE 205
Query: 270 EELRNISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPT-SAFI 328
L+ ++ A + L L+C+GG+ + L G V YG M + P S +
Sbjct: 206 ATLK-FTKGAGV---NLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLL 261
Query: 329 FKDITLRGHWMTRWQKENKESAERKSMMNELTEMM 363
FK RG +T + ++++ ++ ++N TE +
Sbjct: 262 FK----RGSLITSLLR-SRDNKYKQMLVNAFTEQI 291
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 19/228 (8%)
Query: 172 GKFNHDVLMKVPKDIALTEISGITSNP-CTAYRMLKDYNSLSPGDVVIQNGANSACGQNV 230
GK +L + P I L+ G P TAY L + + G+ V+ N A A G V
Sbjct: 98 GKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVV 157
Query: 231 IQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---TEEELRNISRDASIPKPKLA 287
QIA+ G K + V + + + +YL+ LG D VF T E L + AS
Sbjct: 158 GQIAKLKGCKVVGAVGSDEKV----AYLQKLGFDVVFNYKTVESLEETLKKASPDGYDCY 213
Query: 288 LNCVGGNSATNLLRTLVSKGVMVTYGGMS------REPVQIPTSAFIFKDITLRGHWMTR 341
+ VGG + ++ + G + G +S P P I++++ + + R
Sbjct: 214 FDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYR 273
Query: 342 WQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTM 389
WQ + ++ A + +L + + GK+ + +N A M +
Sbjct: 274 WQGDARQKA-----LKDLLKWVLEGKIQYKEYIIEGFENMPAAFMGML 316
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 19/228 (8%)
Query: 172 GKFNHDVLMKVPKDIALTEISGITSNP-CTAYRMLKDYNSLSPGDVVIQNGANSACGQNV 230
GK +L + P I L+ G P TAY L + + G+ V+ N A A G V
Sbjct: 119 GKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVV 178
Query: 231 IQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---TEEELRNISRDASIPKPKLA 287
QIA+ G K + V + + + +YL+ LG D VF T E L + AS
Sbjct: 179 GQIAKLKGCKVVGAVGSDEKV----AYLQKLGFDVVFNYKTVESLEETLKKASPDGYDCY 234
Query: 288 LNCVGGNSATNLLRTLVSKGVMVTYGGMS------REPVQIPTSAFIFKDITLRGHWMTR 341
+ VGG + ++ + G + G +S P P I++++ + + R
Sbjct: 235 FDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYR 294
Query: 342 WQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTM 389
WQ + ++ A + +L + + GK+ + +N A M +
Sbjct: 295 WQGDARQKA-----LKDLLKWVLEGKIQYKEYIIEGFENMPAAFMGML 337
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 113/301 (37%), Gaps = 68/301 (22%)
Query: 77 VYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGF 136
V + +G PLR+ V+ Q V+VK+ + V D++ +G +P+KP LP +PG
Sbjct: 11 VVHAYGAPLRIEEVKVPLPGPGQ---VLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGH 67
Query: 137 XXXXXXXXXXXXXXXLAVGDHV-IP--------------------DTQHLGTWRNYGKFN 175
+ GD V IP ++Q + G +
Sbjct: 68 EGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYA 127
Query: 176 HDVLMK------VPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQN 229
VL +PK++ EI+ I T Y+ LK N+ PG V +G G
Sbjct: 128 EYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGLKQTNA-RPGQWVAISGIGG-LGHV 185
Query: 230 VIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYVFT---EEELRNISRDASIPKPK 285
+Q AR GL I DID K L + LGA E+ + I RD
Sbjct: 186 AVQYARAMGLHVAAI-----DIDDAKLELARKLGASLTVNARQEDPVEAIQRD------- 233
Query: 286 LALNCVGGNSATNLLRTLVSKGVMVTYGGMSRE----------PVQIPTSAFIFKDITLR 335
+GG A +L T VS GM+R P PT F D+ L+
Sbjct: 234 -----IGG--AHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIF---DVVLK 283
Query: 336 G 336
G
Sbjct: 284 G 284
>pdb|3PI7|A Chain A, Crystal Structure Of A Putative Nadph:quinone Reductase
(Mll3093) From Mesorhizobium Loti At 1.71 A Resolution
Length = 349
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 30/263 (11%)
Query: 102 EVVVKMLVAPVNPADINTIQGVYPIKPTLPAVP-GFXXXXXXXXXXXXXXXLA-VGDHVI 159
+V++K+ +A +NP+D+ I+G Y +P + P GF + VG V
Sbjct: 51 QVLIKVNLASINPSDVAFIKGQYG-QPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVA 109
Query: 160 PDT--QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVV 217
T + G+W Y + + + + + NP TA V
Sbjct: 110 FATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAXIVNPLTAIAXFDIVKQEGEKAFV 169
Query: 218 IQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE------ 271
GA+ C + +I +A+ G + I VR + I + LK +GA +V E+
Sbjct: 170 XTAGASQLC-KLIIGLAKEEGFRPIVTVRRDEQI----ALLKDIGAAHVLNEKAPDFEAT 224
Query: 272 LRNISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMS------REPVQIPTS 325
LR + + +P++ L+ V G A+ + + + YG + REP Q+
Sbjct: 225 LREVXKAE---QPRIFLDAVTGPLASAIFNAXPKRARWIIYGRLDPDATVIREPGQL--- 278
Query: 326 AFIFKDITLRGHWMTRWQKENKE 348
IF+ + G W++ W ++ KE
Sbjct: 279 --IFQHKHIEGFWLSEWXRQFKE 299
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 110/269 (40%), Gaps = 34/269 (12%)
Query: 131 PAVPGFXXXXXXXXXXXXXXXLAVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTE 190
P V GF VG+ V LG + + + L+KVPKD+ L +
Sbjct: 61 PIVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDD 120
Query: 191 I--SGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 248
+ +G+ TA +L + + PGD V+ + A G ++ ARH G I V
Sbjct: 121 VHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTE 180
Query: 249 DDIDKLKSYLKSLGADYV--FTEEELRNISRDASIPKP-KLALNCVGGNSATNLLRTLVS 305
+ + + LG + ++ ++ + R+ + K + + +G ++ L L
Sbjct: 181 EKAET----ARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRP 236
Query: 306 KGVMVTYGGMS--REPVQIPTSAFIFKDITLRGH-WMTR---WQKENKESAERKSMMNEL 359
+G+ YG S +P++ + +D+ +RG ++TR W + S E L
Sbjct: 237 RGMCAAYGHASGVADPIR------VVEDLGVRGSLFITRPALWHYMSNRS-EIDEGSKCL 289
Query: 360 TEMMRTGKL------------AAPAHKFV 376
+ ++ G L AA AHK++
Sbjct: 290 FDAVKAGVLHSSVAKTFPLREAAAAHKYM 318
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 82/215 (38%), Gaps = 31/215 (14%)
Query: 76 LVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPG 135
+V G P V+ V + + EV V++ A +N D+ +GV K LP V G
Sbjct: 4 VVMRARGGP-EVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLG 62
Query: 136 FXXXXXXXXXXXXXXXLAVGDHVI---------------------PDTQHLG-----TWR 169
A GD V+ P Q LG T+
Sbjct: 63 ADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYA 122
Query: 170 NYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQN 229
Y L PK+++ E + I TA++M+ D + PGD V+ A S
Sbjct: 123 EYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVA 182
Query: 230 VIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD 264
IQIA+ +G + I + D + + K+LGAD
Sbjct: 183 AIQIAKLFGARVIATAGSEDKLRR----AKALGAD 213
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 73/182 (40%), Gaps = 21/182 (11%)
Query: 101 HEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFXXXXXXXXXXXXXXXLAVGDHVI- 159
HE++VK+ VNP D T Q + + P V GF GD V
Sbjct: 33 HEILVKIQSISVNPVD--TKQRLMDVSKA-PRVLGFDAIGVVESVGNEVTMFNQGDIVYY 89
Query: 160 ---PDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPG-- 214
PD G+ Y N ++ K PK+I+ + + TAY L D +S
Sbjct: 90 SGSPDQN--GSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRN 147
Query: 215 -----DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTE 269
++I NGA G QIA+ +GL+ I + I+ + K +GAD V
Sbjct: 148 ENEGKTLLIINGA-GGVGSIATQIAKAYGLRVITTASRNETIE----WTKKMGADIVLNH 202
Query: 270 EE 271
+E
Sbjct: 203 KE 204
>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
Burnetii
Length = 321
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 128/312 (41%), Gaps = 28/312 (8%)
Query: 78 YNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQG----VYPIKPTLPAV 133
++Q G P +V+ + + +K++ ++K+ A +NP D T G +K LP+
Sbjct: 12 FDQFGPP-KVLKLVDTPTPEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSG 70
Query: 134 PGFXXXXXXXXXXXXXXXLAVGDHV-----IPDTQHLGTWRNYGKFNHDVLMKVPKDIAL 188
G+ + +GD V PD H + Y + D +++ + ++
Sbjct: 71 LGYDFSGEVIELGSDVNNVNIGDKVXGIAGFPD--HPCCYAEYVCASPDTIIQKLEKLSF 128
Query: 189 TEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 248
+ + + + TA + L + + GDVV+ + G IQ+A+ G I R
Sbjct: 129 LQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR 187
Query: 249 DDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVGGNSATNLLRTLVSKGV 308
+ ++LK+LGA+ E + S P + ++ VGG+ + L G
Sbjct: 188 N-----HAFLKALGAEQCINYHE-EDFLLAISTPVDAV-IDLVGGDVGIQSIDCLKETGC 240
Query: 309 MV-----TYGGMSREPVQIPTSAF-IFKDITLRG-HWMTRWQKENKESAERKSMMNELTE 361
+V T G + Q AF + K + H++ + E+K E S + +L+E
Sbjct: 241 IVSVPTITAGRVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLRIEI-SRIFQLSE 299
Query: 362 MMRTGKLAAPAH 373
+ +L H
Sbjct: 300 AVTAHELLETGH 311
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 124/323 (38%), Gaps = 50/323 (15%)
Query: 51 MSTELCTYISLLDTSARGFSYLANKL---VYNQHGTPLRVVTVENETLNSVQKHEVVVKM 107
M+ ++ L+ +G +A + V G PL T++ + ++ V +
Sbjct: 1 MAHHHHHHMGTLEAQTQGPGSMAKTMKAAVVRAFGKPL---TIDEVPIPQPGPGQIQVAI 57
Query: 108 LVAPVNPADINTIQGVYPIKPTLPAVPGFXXXXXXXXXXXXXXXLAVGDHV-IP------ 160
+ V D++ +G +P+KP P +PG + GD V IP
Sbjct: 58 QASGVCHTDLHAAEGDWPVKPNPPFIPGHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTAC 117
Query: 161 -DTQH-LGTWRNY------------GKFNHDVLMK------VPKDIALTEISGITSNPCT 200
+H LG W G F V+ +PK+I EI+ + T
Sbjct: 118 GHCRHCLGGWETLCEEQLNTGYSVNGGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVT 177
Query: 201 AYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-K 259
Y+ LK ++ PGD V+ +G G +Q AR GL + DID K L +
Sbjct: 178 VYKGLKVTDT-KPGDWVVISGI-GGLGHMAVQYARAMGLNVAAV-----DIDDRKLDLAR 230
Query: 260 SLGADYVFTEEELRN----ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGM 315
LGA + + + I ++ + + V + L +V++G V+ G+
Sbjct: 231 RLGATVTVNAKTVADPAAYIRKETDGGAQGVLVTAVSPKAFEQAL-GMVARGGTVSLNGL 289
Query: 316 SREPVQIPTSAF--IFKDITLRG 336
P P S F + +T+RG
Sbjct: 290 P--PGDFPLSIFNMVLNGVTVRG 310
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 113/300 (37%), Gaps = 61/300 (20%)
Query: 77 VYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGF 136
V G PL T++ + +V VK+ + V D++ G +P+KPTLP +PG
Sbjct: 7 VVRAFGAPL---TIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGH 63
Query: 137 XXXXXXXXXXXXXXXLAVGDHV-IP-------DTQH-LGTWR---------------NYG 172
+ GD V +P +H L W YG
Sbjct: 64 EGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYG 123
Query: 173 KF---NHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQN 229
++ + + + +P + EI+ I T Y+ LK ++ PG V+ +G G
Sbjct: 124 EYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTDT-RPGQWVVISGIG-GLGHV 181
Query: 230 VIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYVFTEEELRNISRDASIPKPKLAL 288
+Q AR GL+ + DID K L + LGA+ R+ A + K
Sbjct: 182 AVQYARAMGLRVAAV-----DIDDAKLNLARRLGAEVAVNA---RDTDPAAWLQKE---- 229
Query: 289 NCVGGNSATNLLRTLVS------------KGVMVTYGGMSREPVQIPTSAFIFKDITLRG 336
+GG A +L T VS +G + G+ P + K IT+RG
Sbjct: 230 --IGG--AHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRG 285
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 37/209 (17%)
Query: 200 TAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK 259
TAY LK+ LS G V+ A GQ +Q+++ I + D+ ++LK
Sbjct: 129 TAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS----DEKSAFLK 184
Query: 260 SLGADYV--FTEEELRNISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSR 317
SLG D + E + + + + VGG + L +KG ++ G +S
Sbjct: 185 SLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISG 244
Query: 318 -------EPVQIPT--SAFIFKDITLRG----HWMTRWQKENKESAERKSMMNELTEMMR 364
PV+ T + + K +++G H+++++Q + M+ L EM
Sbjct: 245 YQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQ----------AAMSHLLEMCV 294
Query: 365 TGKLA--------APAHKFVTLKNFQEAL 385
+G L +P +F L++ A+
Sbjct: 295 SGDLVCEVDLGDLSPEGRFTGLESIFRAV 323
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 37/209 (17%)
Query: 200 TAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK 259
TAY LK+ LS G V+ A GQ +Q+++ I + D+ ++LK
Sbjct: 150 TAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS----DEKSAFLK 205
Query: 260 SLGADYV--FTEEELRNISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSR 317
SLG D + E + + + + VGG + L +KG ++ G +S
Sbjct: 206 SLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISG 265
Query: 318 -------EPVQIPT--SAFIFKDITLRG----HWMTRWQKENKESAERKSMMNELTEMMR 364
PV+ T + + K +++G H+++++Q + M+ L EM
Sbjct: 266 YQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQ----------AAMSHLLEMCV 315
Query: 365 TGKLA--------APAHKFVTLKNFQEAL 385
+G L +P +F L++ A+
Sbjct: 316 SGDLVCEVDLGDLSPEGRFTGLESIFRAV 344
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 37/209 (17%)
Query: 200 TAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK 259
TAY LK+ LS G V+ A GQ +Q+++ I + D+ ++LK
Sbjct: 158 TAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS----DEKSAFLK 213
Query: 260 SLGADYV--FTEEELRNISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSR 317
SLG D + E + + + + VGG + L +KG ++ G +S
Sbjct: 214 SLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISG 273
Query: 318 -------EPVQIPT--SAFIFKDITLRG----HWMTRWQKENKESAERKSMMNELTEMMR 364
PV+ T + + K +++G H+++++Q + M+ L EM
Sbjct: 274 YQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQ----------AAMSHLLEMCV 323
Query: 365 TGKLA--------APAHKFVTLKNFQEAL 385
+G L +P +F L++ A+
Sbjct: 324 SGDLVCEVDLGDLSPEGRFTGLESIFRAV 352
>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1Y9E|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
Length = 330
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 21/198 (10%)
Query: 152 LAVGDHVIPDTQHLGTWRN-----YGKFNHDVLMKVPKDIALTE-----ISGITSNPCTA 201
A GD VI + LG R+ Y D L+ +P++++L E +G T+ +
Sbjct: 81 FAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAXVYGTAGFTA-ALSV 139
Query: 202 YRMLKDYNSLSP--GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK 259
+R+ + N LSP G V++ G V + + G + NR+ D YLK
Sbjct: 140 HRL--EQNGLSPEKGSVLVTGATGGVGGIAVSXLNKR-GYDVVASTGNREAAD----YLK 192
Query: 260 SLGADYVFTEEELRNISRDA-SIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSRE 318
LGA V + E++ + + A S + + A++ VGG +LL + G + G
Sbjct: 193 QLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGG 252
Query: 319 PVQIPTSAFIFKDITLRG 336
V FI + ++L G
Sbjct: 253 EVPATVYPFILRGVSLLG 270
>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
pdb|4EYE|B Chain B, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
Length = 342
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 88/216 (40%), Gaps = 14/216 (6%)
Query: 103 VVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFXXXXXXXXXXXXXXXLAVGDHVIPDT 162
VVV + A V D +G Y +K P VPG + GD V+
Sbjct: 51 VVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEGSG-IKPGDRVM-AF 108
Query: 163 QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGA 222
+G + ++ P + E + +N T Y L G+ V+ GA
Sbjct: 109 NFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGA 168
Query: 223 NSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE-----LRNISR 277
G IQIA+ G K I +V NR ++KS+GAD V EE +R +
Sbjct: 169 AGGIGTAAIQIAKGMGAKVIAVV-NR---TAATEFVKSVGADIVLPLEEGWAKAVREATG 224
Query: 278 DASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYG 313
A + + ++ +GG + + +RTL S+G ++ G
Sbjct: 225 GAGV---DMVVDPIGGPAFDDAVRTLASEGRLLVVG 257
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 88/229 (38%), Gaps = 24/229 (10%)
Query: 102 EVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFXXXXXXXXXXXXXXXLAVGDHV--- 158
EV + M A VN D G+YP +L G LA GD V
Sbjct: 240 EVRIAMRAAGVNFRDALIALGMYPGVASL----GSEGAGVVVETGPGVTGLAPGDRVMGM 295
Query: 159 IPDTQHLGTWRNYGKF---NHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGD 215
IP + +G +H ++ ++P + + + TAY L D L PG+
Sbjct: 296 IP--------KAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGE 347
Query: 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFT-EEELRN 274
++ + A G IQ+ARH G + + + D ++ + L + E++
Sbjct: 348 SLLVHSAAGGVGMAAIQLARHLGAE-VYATASEDKWQAVELSREHLASSRTCDFEQQFLG 406
Query: 275 ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMS-REPVQI 322
+ + + LN + G A LR L G + G R+PV++
Sbjct: 407 ATGGRGV---DVVLNSLAGEFADASLRMLPRGGRFLELGKTDVRDPVEV 452
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 8/168 (4%)
Query: 179 LMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWG 238
L+ +P+ ++ E + + TAY LK + PG+ V+ A A G +Q+AR G
Sbjct: 92 LLPLPEGLSPEEAAAFPVSFLTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMG 150
Query: 239 LKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVGGNSATN 298
L+ + + + + +LGA+ T E+ R + L L V G
Sbjct: 151 LRVLAAASRPEKL----ALPLALGAEEAATYAEVPE--RAKAWGGLDLVLE-VRGKEVEE 203
Query: 299 LLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKEN 346
L L G +V G E IP + +++ + G W+T +E
Sbjct: 204 SLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREG 251
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 80/207 (38%), Gaps = 15/207 (7%)
Query: 191 ISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD 250
+S + TAY L D G+ V+ +GA A G QIAR G + + I +
Sbjct: 127 LSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEK 186
Query: 251 IDKLKSYLKSLGADYVFTEEELRNISRDASIPKP-KLALNCVGGNSATNLLRTLVSKGVM 309
L L GA E+ + R+ PK + + VGG +L + K +
Sbjct: 187 CRFLVEELGFDGAIDYKNEDLAAGLKREC--PKGIDVFFDNVGGEILDTVLTRIAFKARI 244
Query: 310 VTYGGMS----REPVQIPTS--AFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMM 363
V G +S +E V+ P + + + + G + + + E + E+ +
Sbjct: 245 VLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEG------LKEMATWL 298
Query: 364 RTGKLAAPAHKFVTLKNFQEALMNTMS 390
GKL + L+ F E L+ S
Sbjct: 299 AEGKLQSREDIVEGLETFPETLLKLFS 325
>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh
pdb|1O8C|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|B Chain B, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|C Chain C, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|D Chain D, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
Length = 345
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 93/240 (38%), Gaps = 16/240 (6%)
Query: 164 HLGTWRNYGKFNHDVLMKVPKDI-----ALTEISGITSNPCTAYRMLKDYNSLSPGDVVI 218
H G + D L+ +P+ + + +G T+ C L+D ++
Sbjct: 115 HWGGLAEQARVKGDWLVAMPQGLDARKAMIIGTAGFTAMLCV--MALEDAGVRPQDGEIV 172
Query: 219 QNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRD 278
GA+ G + + G + + V R+ + YLKSLGA V +E SR
Sbjct: 173 VTGASGGVGSTAVALLHKLGYQVVA-VSGRESTHE---YLKSLGASRVLPRDEFAE-SRP 227
Query: 279 ASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHW 338
A++ VG +L + G + G + FI +++ L+G
Sbjct: 228 LEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVD 287
Query: 339 MTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVK 398
E + A ++ ++ +L E T AA NF EA++N IQG++ VK
Sbjct: 288 SVMTPPERRAQAWQR-LVADLPESFYT--QAAKEISLSEAPNFAEAIINN-QIQGRTLVK 343
>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3H|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3I|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3I|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3J|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3J|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
pdb|2J3K|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
Length = 345
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 185 DIALTEISGITSNP-CTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTIN 243
D+ L+ +G+ P TAY + S G+ V + A+ A GQ V Q+A+ G +
Sbjct: 126 DVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVG 185
Query: 244 IVRNRDDIDKLKSYLKSLGADYVFTEEELRNIS 276
+++ +D LK+ G D F +E +++
Sbjct: 186 SAGSKEKVDLLKT---KFGFDDAFNYKEESDLT 215
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 8/168 (4%)
Query: 179 LMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWG 238
L+ +P+ ++ E + + TAY LK + PG+ V+ A A G +Q+AR G
Sbjct: 92 LLPLPEGLSPEEAAAFPVSFLTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAXG 150
Query: 239 LKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVGGNSATN 298
L+ + + + + +LGA+ T E+ R + L L V G
Sbjct: 151 LRVLAAASRPEKL----ALPLALGAEEAATYAEVPE--RAKAWGGLDLVLE-VRGKEVEE 203
Query: 299 LLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKEN 346
L L G +V G E IP +++ + G W+T +E
Sbjct: 204 SLGLLAHGGRLVYIGAAEGEVAPIPPLRLXRRNLAVLGFWLTPLLREG 251
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 65/176 (36%), Gaps = 8/176 (4%)
Query: 164 HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGAN 223
H G Y + PK + E S + TA+ L + L GD V+ G
Sbjct: 140 HPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTG 199
Query: 224 SACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPK 283
+QIA+ G + I +R+ +D+ +LGAD+ E + R ++
Sbjct: 200 GVALFG-LQIAKATGAEVIVTSSSREKLDR----AFALGADHGINRLEEDWVERVYALTG 254
Query: 284 PKLA---LNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRG 336
+ A L GG L+ + G + G + V P + K ++G
Sbjct: 255 DRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQG 310
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 164 HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPC--TAYRML-KDYNS-LSPGDVVIQ 219
+ G YG L+ PK LT S C TAYRML D + + GD+V+
Sbjct: 169 NFGGLAEYGVVRASQLL--PKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLI 226
Query: 220 NGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEEL 272
GA+ G IQ ++ G + +V + + ++ +++LG D V EL
Sbjct: 227 WGASGGLGSYAIQFVKNGGGIPVAVVSSA----QKEAAVRALGCDLVINRAEL 275
>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
pdb|1XA0|B Chain B, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
Length = 328
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 74/193 (38%), Gaps = 17/193 (8%)
Query: 155 GDHVIP-----DTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLK--D 207
GD VI H G + Y + + + L+ +PK + L E I + TA + +
Sbjct: 83 GDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAXAIGTAGFTAALSIHRLE 142
Query: 208 YNSLSP--GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY 265
+ L+P G V++ GA G + G + D YL+ LGA
Sbjct: 143 EHGLTPERGPVLV-TGATGGVGSLAVSXLAKRGYTVEASTGKAAEHD----YLRVLGAKE 197
Query: 266 VFTEEELRNISRDASIPKPK--LALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIP 323
V E++ R + K + A++ VGG + +L G + G V
Sbjct: 198 VLAREDV-XAERIRPLDKQRWAAAVDPVGGRTLATVLSRXRYGGAVAVSGLTGGAEVPTT 256
Query: 324 TSAFIFKDITLRG 336
FI + ++L G
Sbjct: 257 VHPFILRGVSLLG 269
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 177 DVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARH 236
D+++ +P +A E + TA+ L + LSPG+ V+ + A G + IA+
Sbjct: 2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKM 61
Query: 237 WGLKTINIVRNRDDIDKLKSYLKSLGADYV 266
G + + D + L LG +YV
Sbjct: 62 IGARIYTTAGS----DAKREMLSRLGVEYV 87
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 34.7 bits (78), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 177 DVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARH 236
D +KVP + E S IT T Y+ +K + + PGD + GA G IQ A++
Sbjct: 128 DYAVKVPDGLDPIEASSITCAGVTTYKAIK-VSGVKPGDWQVIFGAGG-LGNLAIQYAKN 185
Query: 237 -WGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISR 277
+G K I + N+D ++ K +GAD + ++ +
Sbjct: 186 VFGAKVIAVDINQDKLN----LAKKIGADVIINSGDVNPVDE 223
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 164 HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGAN 223
H G+++ Y + +P+ L +++ I T Y+ LK N L G V +GA
Sbjct: 121 HDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSAN-LMAGHWVAISGAA 179
Query: 224 SACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV--FTEEE 271
G +Q A+ G + + I D + + +S+G + FT+E+
Sbjct: 180 GGLGSLAVQYAKAMGYRVLGI----DGGEGKEELFRSIGGEVFIDFTKEK 225
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 177 DVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARH 236
D +KVP + E S IT T Y+ +K + + PGD + GA G IQ A++
Sbjct: 128 DYAVKVPDGLDPIEASSITCAGVTTYKAIK-VSGVKPGDWQVIFGAGG-LGNLAIQYAKN 185
Query: 237 -WGLKTINIVRNRDDIDKLKSYLKSLGAD 264
+G K I + N+D ++ K +GAD
Sbjct: 186 VFGAKVIAVDINQDKLN----LAKKIGAD 210
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 99/274 (36%), Gaps = 15/274 (5%)
Query: 102 EVVVKMLVAPVNPADINTIQGVYP-IKPTLPAVPGFXXXXXXXXXXXXXXXLAVGDHVIP 160
+V+V++ + NP D G P + LPA+ G VGD V
Sbjct: 34 QVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGXDLAGTVVAVGPEVDSFRVGDAVFG 93
Query: 161 DTQHLG----TWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDV 216
T +G T + + +L P + + S + TA+ L D + G
Sbjct: 94 LTGGVGGLQGTHAQFAAVDARLLASKPAALTXRQASVLPLVFITAWEGLVDRAQVQDGQT 153
Query: 217 VIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNIS 276
V+ G G IQIA G + R D Y++ LGA + E + +
Sbjct: 154 VLIQGGGGGVGHVAIQIALARGARVFATARGSD-----LEYVRDLGATPIDASREPEDYA 208
Query: 277 RDASIPKP-KLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLR 335
+ + + L + +GG + G +V+ G + P S FK T
Sbjct: 209 AEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLGWGTHKLA-PLS---FKQATYS 264
Query: 336 GHWMTRWQKENKESAERKSMMNELTEMMRTGKLA 369
G + N+ A + E +++TGKLA
Sbjct: 265 GVFTLHTLLANEGLAHFGEXLREADALVQTGKLA 298
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 83/235 (35%), Gaps = 21/235 (8%)
Query: 181 KVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK 240
+VP L E + + TAY L + PG+ V+ + + GQ I IA G +
Sbjct: 1635 EVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCR 1694
Query: 241 TINIVRNRDDIDKLKSYLKSL-------GADYVFTEEELRNISRDASIPKPKLALNCVGG 293
V + + L++ L D F + LR+ + L LN +
Sbjct: 1695 VFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGV----DLVLNSLAE 1750
Query: 294 NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERK 353
+R L G + G A K++T G + +E
Sbjct: 1751 EKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEG------G 1804
Query: 354 SMMNELTEMMRTG---KLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFRQ 405
+ E++E+++ G + P V + EA M+ QGK K I R+
Sbjct: 1805 ATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMA-QGKHIGKVVIQVRE 1858
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
Query: 166 GTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSA 225
G + Y H + + ++ E + +T + T YR ++ SL P ++ GA
Sbjct: 124 GAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRK-ASLDPSKTLVVIGAGGG 182
Query: 226 CGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTE------EELRNISR 277
G IQIA+ TI V R++ + K GADYV E+R I++
Sbjct: 183 LGTMAIQIAKAVSGATIIGVDVREEALEAA---KRAGADYVINASSQDPVSEIRRITQ 237
>pdb|2RGX|A Chain A, Crystal Structure Of Adenylate Kinase From Aquifex
Aeolicus In Complex With Ap5a
pdb|2RH5|A Chain A, Structure Of Apo Adenylate Kinase From Aquifex Aeolicus
pdb|2RH5|C Chain C, Structure Of Apo Adenylate Kinase From Aquifex Aeolicus
pdb|2RH5|B Chain B, Structure Of Apo Adenylate Kinase From Aquifex Aeolicus
pdb|3SR0|A Chain A, Crystal Structure Of The Phosphoryl Transfer Transition
State Mimic In The Adenylate Kinase: AdpALF4AMP IN THE
ACTIVE SITE
pdb|3SR0|B Chain B, Crystal Structure Of The Phosphoryl Transfer Transition
State Mimic In The Adenylate Kinase: AdpALF4AMP IN THE
ACTIVE SITE
Length = 206
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 173 KFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQN 220
K +H +L +VP ++ + +SG NP T YN PG VIQ
Sbjct: 103 KVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPPPGVKVIQR 150
>pdb|3IUP|A Chain A, Crystal Structure Of Putative Nadph:quinone Oxidoreductase
(Yp_296108.1) From Ralstonia Eutropha Jmp134 At 1.70 A
Resolution
pdb|3IUP|B Chain B, Crystal Structure Of Putative Nadph:quinone Oxidoreductase
(Yp_296108.1) From Ralstonia Eutropha Jmp134 At 1.70 A
Resolution
Length = 379
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 168 WRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACG 227
+ Y D + +P+ + + NP TA ++ L ++ A S G
Sbjct: 127 YSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGXVETXR-LEGHSALVHTAAASNLG 185
Query: 228 QNVIQIARHWGLKTINIVRNRDDIDKLKS 256
Q + QI G+K +NIVR ++ D LK+
Sbjct: 186 QXLNQICLKDGIKLVNIVRKQEQADLLKA 214
>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
pdb|3NX4|B Chain B, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
Length = 324
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 66/178 (37%), Gaps = 12/178 (6%)
Query: 164 HLGTWRNYGKFNHDVLMKVP-----KDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVI 218
H G + D L+ +P ++ + +G T+ C L+D V+
Sbjct: 94 HWGGLAERARVKGDWLVALPAGLSSRNAXIIGTAGFTAXLCVX--ALEDAGIRPQDGEVV 151
Query: 219 QNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRD 278
GA+ G + + G + + V R+ YLKSLGA+ + + +E SR
Sbjct: 152 VTGASGGVGSTAVALLHKLGYQ-VAAVSGREST---HGYLKSLGANRILSRDEFAE-SRP 206
Query: 279 ASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRG 336
A++ VG +L G + G + FI +++ L+G
Sbjct: 207 LEKQLWAGAIDTVGDKVLAKVLAQXNYGGCVAACGLAGGFALPTTVXPFILRNVRLQG 264
>pdb|3S4O|A Chain A, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
pdb|3S4O|B Chain B, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
Length = 167
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 11/63 (17%)
Query: 254 LKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYG 313
L S+LK L + EL D S+P P + ++CV G +L L +V YG
Sbjct: 87 LDSWLKLL-------DTELARQQEDPSVPPPTIGVHCVAGLGRAPILVAL----ALVEYG 135
Query: 314 GMS 316
+S
Sbjct: 136 NVS 138
>pdb|4F0W|A Chain A, Crystal Structure Of Type Effector Tse1 C30a Mutant From
Pseudomonas Aeruginousa
Length = 188
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 226 CGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL 261
CG + + GLK++ V NR D D+L Y+ SL
Sbjct: 144 CGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSL 179
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 69/168 (41%), Gaps = 15/168 (8%)
Query: 179 LMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWG 238
L+ +P+ ++ E + + TAY LK + PG+ V+ A A G +Q+AR G
Sbjct: 92 LLPLPEGLSPEEAAAFPVSFLTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMG 150
Query: 239 LKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVGGNSATN 298
L+ + + + + +LGA+ T E+ R + L L G +
Sbjct: 151 LRVLAAASRPEKL----ALPLALGAEEAATYAEVPE--RAKAWGGLDLVLEVRGKEVEES 204
Query: 299 LLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKEN 346
L ++ +GG IP + +++ + G W+T +E
Sbjct: 205 L--------GLLAHGGRLVYIAPIPPLRLMRRNLAVLGFWLTPLLREG 244
>pdb|4F0V|A Chain A, Crystal Structure Of Type Effector Tse1 From Pseudomonas
Aeruginousa
Length = 188
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 226 CGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL 261
CG + + GLK++ V NR D D+L Y+ SL
Sbjct: 144 CGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSL 179
>pdb|3VPJ|A Chain A, Crystal Structure Of Type Vi Effector Tse1 From
Pseudomonas Aeruginosa In Complex With Immune Protein
Tsi1
pdb|3VPJ|B Chain B, Crystal Structure Of Type Vi Effector Tse1 From
Pseudomonas Aeruginosa In Complex With Immune Protein
Tsi1
pdb|3VPJ|C Chain C, Crystal Structure Of Type Vi Effector Tse1 From
Pseudomonas Aeruginosa In Complex With Immune Protein
Tsi1
pdb|3VPJ|D Chain D, Crystal Structure Of Type Vi Effector Tse1 From
Pseudomonas Aeruginosa In Complex With Immune Protein
Tsi1
Length = 174
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 226 CGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL 261
CG + + GLK++ V NR D D+L Y+ SL
Sbjct: 130 CGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSL 165
>pdb|4F4M|A Chain A, Structure Of The Type Vi Peptidoglycan Amidase Effector
Tse1 (C30a) From Pseudomonas Aeruginosa
pdb|4F4M|B Chain B, Structure Of The Type Vi Peptidoglycan Amidase Effector
Tse1 (C30a) From Pseudomonas Aeruginosa
pdb|4F4M|C Chain C, Structure Of The Type Vi Peptidoglycan Amidase Effector
Tse1 (C30a) From Pseudomonas Aeruginosa
pdb|4F4M|D Chain D, Structure Of The Type Vi Peptidoglycan Amidase Effector
Tse1 (C30a) From Pseudomonas Aeruginosa
Length = 160
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 226 CGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL 261
CG + + GLK++ V NR D D+L Y+ SL
Sbjct: 110 CGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSL 145
>pdb|4FGE|A Chain A, Structure Of The Effector Protein Tse1 From Pseudomonas
Aeruginosa
pdb|4FGE|B Chain B, Structure Of The Effector Protein Tse1 From Pseudomonas
Aeruginosa
pdb|4FGE|C Chain C, Structure Of The Effector Protein Tse1 From Pseudomonas
Aeruginosa
pdb|4FGE|D Chain D, Structure Of The Effector Protein Tse1 From Pseudomonas
Aeruginosa
Length = 165
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 226 CGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL 261
CG + + GLK++ V NR D D+L Y+ SL
Sbjct: 110 CGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSL 145
>pdb|4EOB|A Chain A, Structure Of The Type Vi Peptidoglycan Amidase Effector
Tse1 From Pseudomonas Aeruginosa
pdb|4EOB|B Chain B, Structure Of The Type Vi Peptidoglycan Amidase Effector
Tse1 From Pseudomonas Aeruginosa
pdb|4EOB|C Chain C, Structure Of The Type Vi Peptidoglycan Amidase Effector
Tse1 From Pseudomonas Aeruginosa
pdb|4EOB|D Chain D, Structure Of The Type Vi Peptidoglycan Amidase Effector
Tse1 From Pseudomonas Aeruginosa
Length = 162
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 226 CGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA 263
CG + + GLK++ V NR D D+L Y+ SL +
Sbjct: 110 CGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSLAS 147
>pdb|4EQA|A Chain A, Crystal Structure Of Pa1844 In Complex With Pa1845 From
Pseudomonas Aeruginosa Pao1
pdb|4EQA|B Chain B, Crystal Structure Of Pa1844 In Complex With Pa1845 From
Pseudomonas Aeruginosa Pao1
Length = 146
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 226 CGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL 261
CG + + GLK++ V NR D D+L Y+ SL
Sbjct: 108 CGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSL 143
>pdb|3VPI|A Chain A, Crystal Structure Of Type Vi Effector Tse1 From
Pseudomonas Aeruginosa
Length = 174
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 226 CGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL 261
CG + + GLK++ V NR D D+L Y+ SL
Sbjct: 130 CGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSL 165
>pdb|4FGD|A Chain A, Structure Of The Effector Protein Tse1 From Pseudomonas
Aeruginosa, Selenomethionine Variant
pdb|4FGD|B Chain B, Structure Of The Effector Protein Tse1 From Pseudomonas
Aeruginosa, Selenomethionine Variant
pdb|4FGD|C Chain C, Structure Of The Effector Protein Tse1 From Pseudomonas
Aeruginosa, Selenomethionine Variant
pdb|4FGD|D Chain D, Structure Of The Effector Protein Tse1 From Pseudomonas
Aeruginosa, Selenomethionine Variant
pdb|4FGI|A Chain A, Structure Of The Effector - Immunity System Tse1 TSI1
FROM Pseudomonas Aeruginosa
pdb|4FGI|C Chain C, Structure Of The Effector - Immunity System Tse1 TSI1
FROM Pseudomonas Aeruginosa
pdb|4FGI|E Chain E, Structure Of The Effector - Immunity System Tse1 TSI1
FROM Pseudomonas Aeruginosa
pdb|4FGI|G Chain G, Structure Of The Effector - Immunity System Tse1 TSI1
FROM Pseudomonas Aeruginosa
Length = 165
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 226 CGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL 261
CG + + GLK++ V NR D D+L Y+ SL
Sbjct: 110 CGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSL 145
>pdb|4EQ8|A Chain A, Crystal Structure Of Pa1844 From Pseudomonas Aeruginosa
Pao1
Length = 162
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 226 CGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL 261
CG + + GLK++ V NR D D+L Y+ SL
Sbjct: 110 CGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSL 145
>pdb|2JG4|A Chain A, Substrate-Free Ide Structure In Its Closed Conformation
pdb|2JG4|B Chain B, Substrate-Free Ide Structure In Its Closed Conformation
Length = 990
Score = 28.1 bits (61), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 202 YRMLKDYNSLSPGDV--VIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK 259
Y +K YN P + +I+ A + +I + ++++N R YL+
Sbjct: 599 YLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLR 658
Query: 260 SLGADYVFTEEELRNISRDASIPKPK 285
L + +T++EL+ D ++P+ K
Sbjct: 659 LLMTEVAWTKDELKEALDDVTLPRLK 684
>pdb|3E4A|A Chain A, Human Ide-Inhibitor Complex At 2.6 Angstrom Resolution
pdb|3E4A|B Chain B, Human Ide-Inhibitor Complex At 2.6 Angstrom Resolution
pdb|2WK3|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-42)
pdb|2WK3|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-42)
Length = 1019
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 202 YRMLKDYNSLSPGDV--VIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK 259
Y +K YN P + +I+ A + +I + ++++N R YL+
Sbjct: 628 YLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLR 687
Query: 260 SLGADYVFTEEELRNISRDASIPKPK 285
L + +T++EL+ D ++P+ K
Sbjct: 688 LLMTEVAWTKDELKEALDDVTLPRLK 713
>pdb|2G47|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-40)
pdb|2G47|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-40)
pdb|2G48|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
pdb|2G48|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
pdb|2G49|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Glucagon
pdb|2G49|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Glucagon
pdb|2G54|A Chain A, Crystal Structure Of Zn-Bound Human Insulin-Degrading
Enzyme In Complex With Insulin B Chain
pdb|2G54|B Chain B, Crystal Structure Of Zn-Bound Human Insulin-Degrading
Enzyme In Complex With Insulin B Chain
pdb|2G56|A Chain A, Crystal Structure Of Human Insulin-degrading Enzyme In
Complex With Insulin B Chain
pdb|2G56|B Chain B, Crystal Structure Of Human Insulin-degrading Enzyme In
Complex With Insulin B Chain
pdb|2JBU|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme
Complexed With Co-Purified Peptides.
pdb|2JBU|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme
Complexed With Co-Purified Peptides.
pdb|3E50|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Transforming Growth Factor-Alpha
pdb|3E50|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Transforming Growth Factor-Alpha
Length = 990
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 202 YRMLKDYNSLSPGDV--VIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK 259
Y +K YN P + +I+ A + +I + ++++N R YL+
Sbjct: 599 YLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLR 658
Query: 260 SLGADYVFTEEELRNISRDASIPKPK 285
L + +T++EL+ D ++P+ K
Sbjct: 659 LLMTEVAWTKDELKEALDDVTLPRLK 684
>pdb|3E4Z|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Insulin-Like Growth Factor Ii
pdb|3E4Z|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Insulin-Like Growth Factor Ii
Length = 990
Score = 28.1 bits (61), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 202 YRMLKDYNSLSPGDV--VIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK 259
Y +K YN P + +I+ A + +I + ++++N R YL+
Sbjct: 599 YLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLR 658
Query: 260 SLGADYVFTEEELRNISRDASIPKPK 285
L + +T++EL+ D ++P+ K
Sbjct: 659 LLMTEVAWTKDELKEALDDVTLPRLK 684
>pdb|3QZ2|A Chain A, The Structure Of Cysteine-Free Human Insulin Degrading
Enzyme
pdb|3QZ2|B Chain B, The Structure Of Cysteine-Free Human Insulin Degrading
Enzyme
pdb|4DTT|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme (ide)
In Complex With Compund 41367
pdb|4DTT|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme (ide)
In Complex With Compund 41367
Length = 990
Score = 28.1 bits (61), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 202 YRMLKDYNSLSPGDV--VIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK 259
Y +K YN P + +I+ A + +I + ++++N R YL+
Sbjct: 599 YLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLR 658
Query: 260 SLGADYVFTEEELRNISRDASIPKPK 285
L + +T++EL+ D ++P+ K
Sbjct: 659 LLMTEVAWTKDELKEALDDVTLPRLK 684
>pdb|2WBY|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Insulin
pdb|2WBY|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Insulin
pdb|2WC0|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Iodinated Insulin
pdb|2WC0|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Iodinated Insulin
pdb|3H44|A Chain A, Crystal Structure Of Insulin Degrading Enzyme In Complex
With Macrophage Inflammatory Protein 1 Alpha
pdb|3H44|B Chain B, Crystal Structure Of Insulin Degrading Enzyme In Complex
With Macrophage Inflammatory Protein 1 Alpha
pdb|3OFI|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Ubiquitin
pdb|3OFI|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Ubiquitin
pdb|3N56|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme (Ide)
In Complex With Human B-Type Natriuretic Peptide (Bnp)
pdb|3N56|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme (Ide)
In Complex With Human B-Type Natriuretic Peptide (Bnp)
pdb|3N57|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme (Ide)
In Complex With Human Atrial Natriuretic Peptide (Anp)
pdb|3N57|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme (Ide)
In Complex With Human Atrial Natriuretic Peptide (Anp)
pdb|2YPU|A Chain A, Human Insulin Degrading Enzyme E111q In Complex With
Inhibitor Compound 41367
pdb|2YPU|B Chain B, Human Insulin Degrading Enzyme E111q In Complex With
Inhibitor Compound 41367
Length = 990
Score = 28.1 bits (61), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 202 YRMLKDYNSLSPGDV--VIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK 259
Y +K YN P + +I+ A + +I + ++++N R YL+
Sbjct: 599 YLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLR 658
Query: 260 SLGADYVFTEEELRNISRDASIPKPK 285
L + +T++EL+ D ++P+ K
Sbjct: 659 LLMTEVAWTKDELKEALDDVTLPRLK 684
>pdb|3HGZ|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
pdb|3HGZ|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
Length = 969
Score = 28.1 bits (61), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 202 YRMLKDYNSLSPGDV--VIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK 259
Y +K YN P + +I+ A + +I + ++++N R YL+
Sbjct: 586 YLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLR 645
Query: 260 SLGADYVFTEEELRNISRDASIPKPK 285
L + +T++EL+ D ++P+ K
Sbjct: 646 LLMTEVAWTKDELKEALDDVTLPRLK 671
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,786,669
Number of Sequences: 62578
Number of extensions: 399087
Number of successful extensions: 1094
Number of sequences better than 100.0: 79
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 1007
Number of HSP's gapped (non-prelim): 83
length of query: 405
length of database: 14,973,337
effective HSP length: 101
effective length of query: 304
effective length of database: 8,652,959
effective search space: 2630499536
effective search space used: 2630499536
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)