Query psy2960
Match_columns 405
No_of_seqs 322 out of 1738
Neff 9.3
Searched_HMMs 46136
Date Fri Aug 16 21:58:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2960.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2960hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 3.2E-59 7E-64 431.0 30.0 307 70-404 1-338 (339)
2 COG0604 Qor NADPH:quinone redu 100.0 7.9E-57 1.7E-61 425.2 34.4 320 73-403 1-326 (326)
3 KOG1202|consensus 100.0 1.2E-58 2.5E-63 461.9 18.7 347 5-404 1384-1742(2376)
4 KOG1197|consensus 100.0 1.2E-55 2.6E-60 379.9 26.2 327 67-405 3-332 (336)
5 KOG0025|consensus 100.0 1.4E-50 2.9E-55 354.9 33.3 339 64-403 11-352 (354)
6 KOG0024|consensus 100.0 1.2E-50 2.6E-55 362.5 27.8 311 70-404 2-353 (354)
7 KOG0023|consensus 100.0 6.2E-50 1.4E-54 356.9 29.8 314 67-404 4-355 (360)
8 COG1062 AdhC Zn-dependent alco 100.0 2.8E-50 6E-55 363.4 27.6 310 71-402 1-365 (366)
9 cd08281 liver_ADH_like1 Zinc-d 100.0 1.8E-48 4E-53 378.2 32.9 311 73-401 1-371 (371)
10 TIGR03451 mycoS_dep_FDH mycoth 100.0 6.5E-48 1.4E-52 372.7 34.1 310 72-402 1-357 (358)
11 PLN02740 Alcohol dehydrogenase 100.0 1E-47 2.2E-52 374.1 33.8 314 69-403 7-381 (381)
12 PLN02586 probable cinnamyl alc 100.0 1.8E-47 3.9E-52 369.3 34.9 311 68-403 8-353 (360)
13 cd08291 ETR_like_1 2-enoyl thi 100.0 1.7E-47 3.6E-52 365.1 34.1 316 73-402 1-324 (324)
14 cd08239 THR_DH_like L-threonin 100.0 2.3E-47 4.9E-52 366.4 33.8 305 73-403 1-339 (339)
15 PLN02827 Alcohol dehydrogenase 100.0 9.6E-47 2.1E-51 366.4 34.9 310 71-404 11-377 (378)
16 PLN02178 cinnamyl-alcohol dehy 100.0 3.1E-46 6.6E-51 361.9 35.5 308 73-403 5-348 (375)
17 cd08292 ETR_like_2 2-enoyl thi 100.0 8.9E-46 1.9E-50 353.0 35.9 321 73-402 1-324 (324)
18 TIGR02818 adh_III_F_hyde S-(hy 100.0 8.1E-46 1.8E-50 359.1 34.7 309 73-403 2-368 (368)
19 cd08301 alcohol_DH_plants Plan 100.0 8.9E-46 1.9E-50 359.3 33.8 309 71-401 1-368 (369)
20 TIGR02822 adh_fam_2 zinc-bindi 100.0 7.4E-46 1.6E-50 353.9 32.4 298 76-401 2-328 (329)
21 cd08300 alcohol_DH_class_III c 100.0 1.1E-45 2.3E-50 358.4 33.4 309 72-402 2-368 (368)
22 PRK09880 L-idonate 5-dehydroge 100.0 1.5E-45 3.2E-50 354.2 33.4 302 71-403 3-343 (343)
23 PLN02514 cinnamyl-alcohol dehy 100.0 3.4E-45 7.3E-50 353.3 35.5 309 71-404 8-351 (357)
24 KOG0022|consensus 100.0 7.2E-46 1.6E-50 329.2 28.1 313 70-403 5-375 (375)
25 PLN03154 putative allyl alcoho 100.0 4.1E-45 8.8E-50 351.3 35.1 317 70-404 6-346 (348)
26 cd08290 ETR 2-enoyl thioester 100.0 7.6E-45 1.7E-49 349.1 35.4 326 73-403 1-341 (341)
27 cd08277 liver_alcohol_DH_like 100.0 1.2E-44 2.5E-49 350.8 34.1 309 71-402 1-365 (365)
28 TIGR02819 fdhA_non_GSH formald 100.0 1.3E-44 2.7E-49 352.3 33.9 308 72-404 2-391 (393)
29 PRK10309 galactitol-1-phosphat 100.0 2.7E-44 5.9E-49 346.1 34.3 310 73-404 1-347 (347)
30 cd08295 double_bond_reductase_ 100.0 3.1E-44 6.8E-49 344.5 33.0 312 73-403 8-338 (338)
31 TIGR01202 bchC 2-desacetyl-2-h 100.0 3.5E-44 7.7E-49 339.3 31.4 294 72-402 1-308 (308)
32 TIGR03201 dearomat_had 6-hydro 100.0 5.8E-44 1.2E-48 344.0 32.8 304 76-403 2-349 (349)
33 cd08293 PTGR2 Prostaglandin re 100.0 2.3E-43 4.9E-48 339.5 35.4 302 86-403 21-345 (345)
34 cd08294 leukotriene_B4_DH_like 100.0 1.4E-43 3E-48 338.7 33.1 308 72-403 2-329 (329)
35 cd08233 butanediol_DH_like (2R 100.0 1.2E-43 2.6E-48 342.2 32.6 304 73-401 1-350 (351)
36 cd08238 sorbose_phosphate_red 100.0 9.3E-44 2E-48 349.3 32.3 312 71-404 1-369 (410)
37 cd08230 glucose_DH Glucose deh 100.0 1.2E-43 2.7E-48 342.5 31.5 306 73-403 1-355 (355)
38 cd08237 ribitol-5-phosphate_DH 100.0 1.5E-43 3.2E-48 339.8 31.4 297 72-404 2-340 (341)
39 TIGR02825 B4_12hDH leukotriene 100.0 3.6E-43 7.8E-48 335.4 32.5 294 86-402 17-325 (325)
40 cd08246 crotonyl_coA_red croto 100.0 1.2E-42 2.6E-47 340.2 33.5 317 68-402 8-392 (393)
41 cd08231 MDR_TM0436_like Hypoth 100.0 1.1E-42 2.3E-47 336.9 31.8 308 73-403 1-361 (361)
42 PTZ00354 alcohol dehydrogenase 100.0 1.1E-41 2.3E-46 326.1 34.9 324 72-404 1-329 (334)
43 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 1.5E-41 3.2E-46 323.9 35.0 316 73-403 1-325 (325)
44 cd08244 MDR_enoyl_red Possible 100.0 2.1E-41 4.6E-46 322.7 35.9 318 73-403 1-324 (324)
45 TIGR01751 crot-CoA-red crotony 100.0 8.9E-42 1.9E-46 334.3 33.9 319 69-404 4-388 (398)
46 cd08296 CAD_like Cinnamyl alco 100.0 1E-41 2.2E-46 326.5 33.5 302 73-402 1-333 (333)
47 TIGR02817 adh_fam_1 zinc-bindi 100.0 9.7E-42 2.1E-46 326.9 33.0 316 74-402 1-334 (336)
48 COG1063 Tdh Threonine dehydrog 100.0 6E-42 1.3E-46 328.0 31.1 310 73-403 1-350 (350)
49 cd08278 benzyl_alcohol_DH Benz 100.0 1.3E-41 2.8E-46 329.5 33.5 311 71-402 1-365 (365)
50 cd05284 arabinose_DH_like D-ar 100.0 1.8E-41 4E-46 325.5 34.0 307 73-403 1-340 (340)
51 PRK10754 quinone oxidoreductas 100.0 1.8E-41 4E-46 323.8 33.2 320 72-402 1-326 (327)
52 cd08274 MDR9 Medium chain dehy 100.0 1.8E-41 3.9E-46 326.8 33.4 310 73-403 1-350 (350)
53 KOG1198|consensus 100.0 1.6E-41 3.4E-46 321.0 29.3 323 72-404 4-346 (347)
54 cd05282 ETR_like 2-enoyl thioe 100.0 9.5E-41 2.1E-45 318.1 34.1 308 87-402 13-323 (323)
55 TIGR02823 oxido_YhdH putative 100.0 1.8E-40 3.9E-45 316.4 34.7 314 74-403 1-323 (323)
56 cd08285 NADP_ADH NADP(H)-depen 100.0 2.1E-40 4.6E-45 319.6 33.7 309 73-403 1-351 (351)
57 cd08289 MDR_yhfp_like Yhfp put 100.0 2.8E-40 6E-45 315.4 34.1 316 73-403 1-326 (326)
58 cd08297 CAD3 Cinnamyl alcohol 100.0 3.9E-40 8.5E-45 316.5 34.0 310 73-403 1-341 (341)
59 cd08263 Zn_ADH10 Alcohol dehyd 100.0 3E-40 6.6E-45 320.4 33.1 308 73-402 1-367 (367)
60 cd08270 MDR4 Medium chain dehy 100.0 5.6E-40 1.2E-44 310.3 33.9 303 73-403 1-305 (305)
61 cd08283 FDH_like_1 Glutathione 100.0 3.6E-40 7.8E-45 321.6 33.4 307 73-403 1-386 (386)
62 cd08250 Mgc45594_like Mgc45594 100.0 8.8E-40 1.9E-44 312.4 34.6 313 72-402 1-329 (329)
63 PRK10083 putative oxidoreducta 100.0 7.6E-40 1.6E-44 314.2 34.1 304 73-404 1-338 (339)
64 PRK13771 putative alcohol dehy 100.0 4.2E-40 9.1E-45 315.3 32.1 305 73-403 1-333 (334)
65 cd08240 6_hydroxyhexanoate_dh_ 100.0 9.8E-40 2.1E-44 314.9 34.3 308 73-403 1-350 (350)
66 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1.3E-39 2.8E-44 311.4 34.0 305 73-402 1-332 (332)
67 cd08279 Zn_ADH_class_III Class 100.0 1E-39 2.2E-44 316.2 33.0 308 73-400 1-362 (363)
68 PRK09422 ethanol-active dehydr 100.0 1.5E-39 3.3E-44 312.0 33.8 304 73-404 1-337 (338)
69 cd05278 FDH_like Formaldehyde 100.0 1.2E-39 2.5E-44 313.9 33.0 307 73-403 1-347 (347)
70 cd08261 Zn_ADH7 Alcohol dehydr 100.0 2.1E-39 4.6E-44 310.9 33.8 304 73-403 1-337 (337)
71 cd08288 MDR_yhdh Yhdh putative 100.0 4.3E-39 9.2E-44 307.0 35.4 315 73-403 1-324 (324)
72 cd05283 CAD1 Cinnamyl alcohol 100.0 1.7E-39 3.8E-44 311.5 32.8 302 74-402 1-337 (337)
73 cd08256 Zn_ADH2 Alcohol dehydr 100.0 2.6E-39 5.7E-44 311.9 34.2 304 73-401 1-350 (350)
74 cd08260 Zn_ADH6 Alcohol dehydr 100.0 2.4E-39 5.2E-44 311.5 33.8 307 73-402 1-344 (345)
75 cd08276 MDR7 Medium chain dehy 100.0 4.1E-39 9E-44 308.3 35.2 312 73-403 1-336 (336)
76 cd08299 alcohol_DH_class_I_II_ 100.0 3E-39 6.4E-44 313.6 34.3 309 72-403 7-373 (373)
77 cd08249 enoyl_reductase_like e 100.0 1.6E-39 3.4E-44 312.0 31.5 310 73-403 1-339 (339)
78 cd08243 quinone_oxidoreductase 100.0 4.3E-39 9.3E-44 305.9 34.2 308 73-401 1-319 (320)
79 cd05279 Zn_ADH1 Liver alcohol 100.0 3.2E-39 6.9E-44 312.8 33.6 307 73-401 1-364 (365)
80 cd08252 AL_MDR Arginate lyase 100.0 8.7E-39 1.9E-43 306.4 34.2 319 73-402 1-336 (336)
81 cd08235 iditol_2_DH_like L-idi 100.0 7.3E-39 1.6E-43 307.9 33.7 304 73-402 1-343 (343)
82 cd08262 Zn_ADH8 Alcohol dehydr 100.0 8.5E-39 1.9E-43 307.2 34.1 305 73-402 1-341 (341)
83 cd05276 p53_inducible_oxidored 100.0 9E-39 2E-43 303.3 33.8 320 73-401 1-323 (323)
84 cd08286 FDH_like_ADH2 formalde 100.0 1.4E-38 3E-43 306.3 33.8 306 73-403 1-345 (345)
85 cd08253 zeta_crystallin Zeta-c 100.0 2E-38 4.2E-43 301.4 34.3 318 73-403 1-325 (325)
86 cd05286 QOR2 Quinone oxidoredu 100.0 3.5E-38 7.7E-43 298.8 35.2 317 74-403 1-320 (320)
87 cd08266 Zn_ADH_like1 Alcohol d 100.0 2.5E-38 5.3E-43 303.2 34.5 313 73-403 1-342 (342)
88 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.8E-38 3.8E-43 304.3 33.2 308 73-403 1-338 (338)
89 cd08272 MDR6 Medium chain dehy 100.0 3.3E-38 7.2E-43 300.3 34.4 317 73-403 1-326 (326)
90 cd08264 Zn_ADH_like2 Alcohol d 100.0 1.9E-38 4.2E-43 302.7 32.8 298 73-400 1-325 (325)
91 cd08284 FDH_like_2 Glutathione 100.0 1.6E-38 3.5E-43 305.6 32.4 303 73-402 1-343 (344)
92 COG2130 Putative NADP-dependen 100.0 1.1E-38 2.3E-43 283.0 27.8 302 86-405 25-340 (340)
93 cd08248 RTN4I1 Human Reticulon 100.0 6.8E-39 1.5E-43 308.9 27.6 323 73-402 1-350 (350)
94 cd08236 sugar_DH NAD(P)-depend 100.0 6.1E-38 1.3E-42 301.5 32.9 308 73-401 1-343 (343)
95 PRK05396 tdh L-threonine 3-deh 100.0 9.5E-38 2.1E-42 300.0 34.1 307 73-404 1-341 (341)
96 TIGR02824 quinone_pig3 putativ 100.0 1.9E-37 4.2E-42 294.8 35.2 322 73-403 1-325 (325)
97 cd08268 MDR2 Medium chain dehy 100.0 1.8E-37 3.9E-42 295.4 34.9 321 73-403 1-328 (328)
98 cd08282 PFDH_like Pseudomonas 100.0 1.1E-37 2.3E-42 303.3 33.9 303 73-403 1-375 (375)
99 cd08273 MDR8 Medium chain dehy 100.0 1.7E-37 3.8E-42 296.7 34.8 313 73-401 1-330 (331)
100 cd08287 FDH_like_ADH3 formalde 100.0 1.9E-37 4.1E-42 298.3 33.9 305 73-403 1-345 (345)
101 cd08242 MDR_like Medium chain 100.0 1.1E-37 2.3E-42 296.8 31.8 289 73-403 1-319 (319)
102 cd08271 MDR5 Medium chain dehy 100.0 5.9E-37 1.3E-41 291.9 35.5 318 73-403 1-325 (325)
103 cd08234 threonine_DH_like L-th 100.0 3.5E-37 7.6E-42 295.1 32.8 301 73-401 1-333 (334)
104 cd05288 PGDH Prostaglandin deh 100.0 4.7E-37 1E-41 293.5 32.4 310 73-401 2-329 (329)
105 cd08251 polyketide_synthase po 100.0 5.9E-37 1.3E-41 288.7 32.5 297 95-401 2-303 (303)
106 cd08265 Zn_ADH3 Alcohol dehydr 100.0 5.6E-37 1.2E-41 299.0 33.1 294 88-401 39-383 (384)
107 cd05285 sorbitol_DH Sorbitol d 100.0 6.8E-37 1.5E-41 294.2 32.1 300 76-401 2-341 (343)
108 cd08232 idonate-5-DH L-idonate 100.0 1.3E-36 2.7E-41 291.9 33.2 293 88-403 9-339 (339)
109 PLN02702 L-idonate 5-dehydroge 100.0 1.9E-36 4E-41 293.5 34.4 307 71-402 16-363 (364)
110 cd08298 CAD2 Cinnamyl alcohol 100.0 1.4E-36 2.9E-41 290.4 32.4 300 73-401 1-329 (329)
111 cd08269 Zn_ADH9 Alcohol dehydr 100.0 1E-36 2.2E-41 288.8 31.1 294 88-401 7-311 (312)
112 cd08247 AST1_like AST1 is a cy 100.0 8.4E-37 1.8E-41 294.7 30.7 315 74-403 2-352 (352)
113 cd08241 QOR1 Quinone oxidoredu 100.0 3.4E-36 7.3E-41 285.8 34.1 319 73-402 1-323 (323)
114 cd08245 CAD Cinnamyl alcohol d 100.0 2E-36 4.4E-41 289.3 31.8 302 74-401 1-330 (330)
115 cd08275 MDR3 Medium chain dehy 100.0 1.2E-35 2.5E-40 284.4 35.3 318 74-403 1-337 (337)
116 cd05281 TDH Threonine dehydrog 100.0 6.1E-36 1.3E-40 287.4 32.4 306 73-403 1-341 (341)
117 TIGR00692 tdh L-threonine 3-de 100.0 1.1E-35 2.4E-40 285.5 33.5 300 79-403 5-340 (340)
118 cd05289 MDR_like_2 alcohol deh 100.0 6.2E-36 1.4E-40 282.4 30.6 305 73-401 1-309 (309)
119 cd08258 Zn_ADH4 Alcohol dehydr 100.0 1.9E-35 4.2E-40 279.6 31.1 275 73-366 1-306 (306)
120 cd05195 enoyl_red enoyl reduct 100.0 5.9E-35 1.3E-39 272.9 30.4 287 101-401 1-293 (293)
121 cd08267 MDR1 Medium chain dehy 100.0 1.3E-34 2.8E-39 275.0 30.3 306 79-401 4-319 (319)
122 TIGR03366 HpnZ_proposed putati 100.0 1.4E-34 3E-39 270.2 23.3 233 133-381 1-280 (280)
123 smart00829 PKS_ER Enoylreducta 100.0 1.5E-33 3.4E-38 263.0 29.5 281 105-401 2-288 (288)
124 cd05188 MDR Medium chain reduc 100.0 8E-32 1.7E-36 249.6 26.3 234 102-341 1-260 (271)
125 KOG1196|consensus 100.0 1.6E-30 3.5E-35 230.1 27.8 315 72-404 3-341 (343)
126 cd08255 2-desacetyl-2-hydroxye 100.0 1.4E-30 3.1E-35 242.8 23.3 259 122-401 14-277 (277)
127 PF08240 ADH_N: Alcohol dehydr 99.8 9E-19 2E-23 139.4 9.8 83 100-182 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 4.9E-17 1.1E-21 133.7 11.1 113 225-341 1-117 (130)
129 PF13602 ADH_zinc_N_2: Zinc-bi 99.5 5E-15 1.1E-19 121.2 4.2 124 261-401 1-127 (127)
130 cd00401 AdoHcyase S-adenosyl-L 99.4 1.3E-11 2.8E-16 119.2 15.3 175 201-404 188-377 (413)
131 PRK09424 pntA NAD(P) transhydr 99.3 3.2E-11 6.9E-16 119.4 16.8 246 101-370 31-334 (509)
132 TIGR00561 pntA NAD(P) transhyd 98.5 5.5E-06 1.2E-10 82.2 16.8 122 212-338 162-312 (511)
133 PRK11873 arsM arsenite S-adeno 98.3 3.7E-06 8.1E-11 78.1 11.0 173 209-402 73-260 (272)
134 PRK05476 S-adenosyl-L-homocyst 98.2 2.7E-05 5.9E-10 75.9 13.6 102 201-316 198-302 (425)
135 PF11017 DUF2855: Protein of u 98.2 0.0006 1.3E-08 63.5 20.9 244 130-394 30-311 (314)
136 TIGR00518 alaDH alanine dehydr 98.1 0.00022 4.7E-09 69.1 17.0 151 213-370 166-331 (370)
137 PRK08306 dipicolinate synthase 98.0 0.00011 2.3E-09 69.0 13.1 110 213-336 151-261 (296)
138 TIGR00936 ahcY adenosylhomocys 98.0 0.0001 2.2E-09 71.5 12.8 101 201-315 181-284 (406)
139 PRK08324 short chain dehydroge 97.9 5.2E-05 1.1E-09 79.7 10.7 113 166-292 385-507 (681)
140 PRK05786 fabG 3-ketoacyl-(acyl 97.9 0.00014 3.1E-09 65.7 12.0 103 213-315 4-137 (238)
141 PLN02494 adenosylhomocysteinas 97.8 0.00014 3.1E-09 71.2 11.2 100 202-315 241-343 (477)
142 cd05213 NAD_bind_Glutamyl_tRNA 97.8 0.00014 3E-09 68.8 9.8 109 177-296 139-251 (311)
143 PRK00517 prmA ribosomal protei 97.8 0.00072 1.6E-08 61.9 13.8 140 152-313 67-213 (250)
144 PRK12771 putative glutamate sy 97.7 5.8E-05 1.3E-09 77.5 7.1 123 210-337 133-275 (564)
145 PRK12742 oxidoreductase; Provi 97.7 0.0005 1.1E-08 62.1 12.3 102 213-316 5-134 (237)
146 KOG1205|consensus 97.7 0.00048 1.1E-08 63.3 11.4 105 213-317 11-153 (282)
147 COG2518 Pcm Protein-L-isoaspar 97.6 0.00044 9.6E-09 60.3 9.5 118 190-314 51-170 (209)
148 PLN03209 translocon at the inn 97.6 0.00067 1.4E-08 68.4 11.7 111 204-316 70-210 (576)
149 PRK08339 short chain dehydroge 97.5 0.00094 2E-08 61.6 11.5 81 213-293 7-95 (263)
150 PRK06198 short chain dehydroge 97.5 0.0029 6.3E-08 58.0 14.8 81 213-293 5-94 (260)
151 PRK12939 short chain dehydroge 97.5 0.00097 2.1E-08 60.6 11.3 81 213-293 6-94 (250)
152 PRK07109 short chain dehydroge 97.5 0.0012 2.6E-08 63.2 12.4 81 213-293 7-95 (334)
153 PRK06139 short chain dehydroge 97.5 0.00047 1E-08 65.9 9.5 80 213-292 6-93 (330)
154 PF13460 NAD_binding_10: NADH( 97.5 0.00073 1.6E-08 58.4 9.8 92 217-316 1-100 (183)
155 TIGR02853 spore_dpaA dipicolin 97.5 0.0017 3.7E-08 60.6 12.0 93 213-316 150-243 (287)
156 PTZ00075 Adenosylhomocysteinas 97.5 0.0013 2.8E-08 64.8 11.5 91 211-315 251-343 (476)
157 COG4221 Short-chain alcohol de 97.4 0.00075 1.6E-08 60.0 8.5 78 213-293 5-91 (246)
158 COG0300 DltE Short-chain dehyd 97.4 0.00065 1.4E-08 61.9 8.0 81 212-292 4-93 (265)
159 PRK12828 short chain dehydroge 97.4 0.0027 5.8E-08 57.2 12.2 81 213-293 6-92 (239)
160 PRK07806 short chain dehydroge 97.4 0.0034 7.3E-08 57.1 12.9 102 213-314 5-135 (248)
161 PRK05993 short chain dehydroge 97.4 0.0023 5E-08 59.5 11.7 76 213-292 3-85 (277)
162 PRK07904 short chain dehydroge 97.3 0.0016 3.5E-08 59.7 10.2 84 210-293 4-97 (253)
163 PRK07576 short chain dehydroge 97.3 0.0036 7.7E-08 57.7 12.3 80 213-292 8-95 (264)
164 PRK13394 3-hydroxybutyrate deh 97.3 0.0016 3.6E-08 59.6 10.1 81 213-293 6-94 (262)
165 PRK07231 fabG 3-ketoacyl-(acyl 97.2 0.0047 1E-07 56.1 12.1 80 213-293 4-91 (251)
166 PF02353 CMAS: Mycolic acid cy 97.2 0.0016 3.5E-08 60.2 8.9 104 202-312 51-165 (273)
167 PF01488 Shikimate_DH: Shikima 97.2 0.0018 3.9E-08 53.3 8.3 92 213-313 11-109 (135)
168 PRK06182 short chain dehydroge 97.2 0.0039 8.4E-08 57.7 11.6 77 213-293 2-84 (273)
169 PRK06128 oxidoreductase; Provi 97.2 0.0056 1.2E-07 57.6 12.5 103 213-315 54-193 (300)
170 PRK05693 short chain dehydroge 97.2 0.0038 8.3E-08 57.8 11.3 74 215-292 2-81 (274)
171 COG2230 Cfa Cyclopropane fatty 97.2 0.0016 3.6E-08 59.7 8.4 115 185-315 50-178 (283)
172 PRK07832 short chain dehydroge 97.2 0.004 8.7E-08 57.6 11.3 78 216-293 2-88 (272)
173 PRK07533 enoyl-(acyl carrier p 97.2 0.0059 1.3E-07 56.1 12.2 81 213-293 9-98 (258)
174 PRK05866 short chain dehydroge 97.2 0.0022 4.7E-08 60.3 9.4 81 213-293 39-127 (293)
175 PRK08085 gluconate 5-dehydroge 97.2 0.0077 1.7E-07 55.0 12.8 81 213-293 8-96 (254)
176 PRK08217 fabG 3-ketoacyl-(acyl 97.2 0.0026 5.5E-08 57.9 9.5 80 213-292 4-91 (253)
177 PRK00377 cbiT cobalt-precorrin 97.2 0.0093 2E-07 52.5 12.7 100 208-311 35-143 (198)
178 PRK09072 short chain dehydroge 97.2 0.0057 1.2E-07 56.2 11.8 80 213-293 4-90 (263)
179 PRK05653 fabG 3-ketoacyl-(acyl 97.1 0.0071 1.5E-07 54.6 12.1 81 213-293 4-92 (246)
180 PRK08261 fabG 3-ketoacyl-(acyl 97.1 0.00078 1.7E-08 67.3 6.2 91 208-316 28-126 (450)
181 PRK00045 hemA glutamyl-tRNA re 97.1 0.0085 1.8E-07 59.3 13.4 153 132-295 90-254 (423)
182 PRK07478 short chain dehydroge 97.1 0.003 6.5E-08 57.7 9.6 81 213-293 5-93 (254)
183 PRK08415 enoyl-(acyl carrier p 97.1 0.0076 1.6E-07 56.0 12.2 80 213-293 4-93 (274)
184 PRK05867 short chain dehydroge 97.1 0.0029 6.3E-08 57.8 9.3 81 213-293 8-96 (253)
185 PRK07831 short chain dehydroge 97.1 0.0035 7.6E-08 57.6 9.6 84 210-293 13-107 (262)
186 PRK05872 short chain dehydroge 97.1 0.0019 4.1E-08 60.7 7.9 78 213-293 8-95 (296)
187 PRK09291 short chain dehydroge 97.1 0.002 4.3E-08 59.0 7.7 78 214-292 2-82 (257)
188 PRK08265 short chain dehydroge 97.1 0.0041 9E-08 57.2 9.9 78 213-293 5-90 (261)
189 COG3967 DltE Short-chain dehyd 97.0 0.0017 3.6E-08 56.0 6.4 74 213-292 4-87 (245)
190 PRK08261 fabG 3-ketoacyl-(acyl 97.0 0.0094 2E-07 59.6 13.0 79 213-292 209-293 (450)
191 PRK12747 short chain dehydroge 97.0 0.01 2.2E-07 54.1 12.1 104 213-316 3-147 (252)
192 PF01135 PCMT: Protein-L-isoas 97.0 0.0022 4.7E-08 56.8 7.2 104 206-314 65-173 (209)
193 PRK07814 short chain dehydroge 97.0 0.0041 9E-08 57.2 9.4 80 213-292 9-96 (263)
194 PRK06949 short chain dehydroge 97.0 0.0055 1.2E-07 56.0 10.0 82 212-293 7-96 (258)
195 PRK08862 short chain dehydroge 97.0 0.0045 9.8E-08 55.8 9.2 80 213-292 4-92 (227)
196 PRK07523 gluconate 5-dehydroge 97.0 0.0055 1.2E-07 56.0 9.9 81 213-293 9-97 (255)
197 PRK07326 short chain dehydroge 97.0 0.0099 2.1E-07 53.6 11.4 81 213-293 5-92 (237)
198 PRK08267 short chain dehydroge 97.0 0.0078 1.7E-07 55.2 10.9 76 215-293 2-87 (260)
199 PRK09186 flagellin modificatio 97.0 0.013 2.8E-07 53.5 12.2 80 213-292 3-92 (256)
200 PRK07985 oxidoreductase; Provi 97.0 0.013 2.8E-07 55.0 12.5 81 213-293 48-138 (294)
201 PRK12938 acetyacetyl-CoA reduc 96.9 0.0076 1.6E-07 54.7 10.5 81 213-293 2-91 (246)
202 PRK08594 enoyl-(acyl carrier p 96.9 0.014 3E-07 53.6 12.2 80 213-292 6-96 (257)
203 PRK06172 short chain dehydroge 96.9 0.0055 1.2E-07 55.9 9.5 81 213-293 6-94 (253)
204 PRK07062 short chain dehydroge 96.9 0.0048 1E-07 56.7 9.0 81 213-293 7-97 (265)
205 PRK06194 hypothetical protein; 96.9 0.0045 9.7E-08 57.7 8.8 81 213-293 5-93 (287)
206 PF00106 adh_short: short chai 96.9 0.0043 9.4E-08 52.6 7.9 79 215-293 1-90 (167)
207 PRK06500 short chain dehydroge 96.9 0.014 3.1E-07 52.9 11.6 78 213-293 5-90 (249)
208 PRK08628 short chain dehydroge 96.9 0.0034 7.4E-08 57.5 7.5 80 213-293 6-93 (258)
209 PRK06181 short chain dehydroge 96.9 0.0027 5.8E-08 58.4 6.8 80 214-293 1-88 (263)
210 PRK11705 cyclopropane fatty ac 96.9 0.007 1.5E-07 58.9 9.9 110 193-313 147-267 (383)
211 PRK07677 short chain dehydroge 96.9 0.0063 1.4E-07 55.6 9.2 80 214-293 1-88 (252)
212 PRK05854 short chain dehydroge 96.9 0.005 1.1E-07 58.4 8.7 81 213-293 13-103 (313)
213 PRK05876 short chain dehydroge 96.8 0.0033 7.1E-08 58.4 7.3 81 213-293 5-93 (275)
214 PRK06914 short chain dehydroge 96.8 0.013 2.8E-07 54.3 11.3 81 213-293 2-91 (280)
215 PRK12823 benD 1,6-dihydroxycyc 96.8 0.02 4.4E-07 52.4 12.5 80 213-293 7-94 (260)
216 PRK06505 enoyl-(acyl carrier p 96.8 0.0064 1.4E-07 56.3 9.2 81 213-293 6-95 (271)
217 PRK12937 short chain dehydroge 96.8 0.011 2.3E-07 53.6 10.5 81 213-293 4-93 (245)
218 PRK08589 short chain dehydroge 96.8 0.0082 1.8E-07 55.6 9.7 80 213-293 5-92 (272)
219 PRK07890 short chain dehydroge 96.8 0.0072 1.6E-07 55.2 9.2 81 213-293 4-92 (258)
220 PRK07791 short chain dehydroge 96.8 0.01 2.2E-07 55.5 10.3 82 212-293 4-102 (286)
221 PRK08213 gluconate 5-dehydroge 96.8 0.0078 1.7E-07 55.1 9.4 81 213-293 11-99 (259)
222 PRK07035 short chain dehydroge 96.8 0.0079 1.7E-07 54.8 9.3 81 213-293 7-95 (252)
223 PRK06935 2-deoxy-D-gluconate 3 96.8 0.011 2.3E-07 54.2 10.2 80 213-293 14-101 (258)
224 PRK07454 short chain dehydroge 96.8 0.0079 1.7E-07 54.4 9.2 82 212-293 4-93 (241)
225 PRK07060 short chain dehydroge 96.8 0.007 1.5E-07 54.8 8.8 78 213-293 8-87 (245)
226 PRK08277 D-mannonate oxidoredu 96.8 0.0086 1.9E-07 55.5 9.5 80 213-292 9-96 (278)
227 PRK12829 short chain dehydroge 96.8 0.011 2.3E-07 54.2 10.1 40 210-249 7-46 (264)
228 KOG1201|consensus 96.8 0.013 2.8E-07 53.8 10.1 78 213-292 37-123 (300)
229 PRK13942 protein-L-isoaspartat 96.8 0.012 2.5E-07 52.5 9.8 103 207-313 70-176 (212)
230 PRK07063 short chain dehydroge 96.7 0.01 2.2E-07 54.4 9.6 81 213-293 6-96 (260)
231 PRK07097 gluconate 5-dehydroge 96.7 0.0083 1.8E-07 55.2 9.1 81 213-293 9-97 (265)
232 TIGR00507 aroE shikimate 5-deh 96.7 0.02 4.3E-07 53.1 11.6 104 203-314 106-215 (270)
233 PRK08643 acetoin reductase; Va 96.7 0.011 2.4E-07 54.0 9.8 80 214-293 2-89 (256)
234 PRK06701 short chain dehydroge 96.7 0.013 2.9E-07 54.8 10.4 81 213-293 45-134 (290)
235 PF12847 Methyltransf_18: Meth 96.7 0.0076 1.7E-07 47.4 7.6 95 213-311 1-109 (112)
236 PRK08340 glucose-1-dehydrogena 96.7 0.009 2E-07 54.8 9.1 78 216-293 2-86 (259)
237 PRK06079 enoyl-(acyl carrier p 96.7 0.019 4.2E-07 52.4 11.1 77 213-293 6-93 (252)
238 PRK08303 short chain dehydroge 96.7 0.012 2.5E-07 55.6 9.9 80 213-292 7-105 (305)
239 PRK06196 oxidoreductase; Provi 96.7 0.0063 1.4E-07 57.7 8.1 78 213-292 25-108 (315)
240 COG2910 Putative NADH-flavin r 96.7 0.0058 1.2E-07 51.9 6.7 93 216-315 2-106 (211)
241 PRK06114 short chain dehydroge 96.7 0.015 3.3E-07 53.1 10.4 81 213-293 7-96 (254)
242 PRK06200 2,3-dihydroxy-2,3-dih 96.7 0.0055 1.2E-07 56.3 7.4 77 213-292 5-89 (263)
243 PRK08945 putative oxoacyl-(acy 96.7 0.0093 2E-07 54.2 8.9 84 210-293 8-102 (247)
244 PLN02780 ketoreductase/ oxidor 96.7 0.0078 1.7E-07 57.2 8.6 80 213-292 52-141 (320)
245 PRK06057 short chain dehydroge 96.7 0.0055 1.2E-07 56.0 7.4 78 213-293 6-89 (255)
246 PRK06484 short chain dehydroge 96.7 0.01 2.3E-07 60.4 10.0 101 212-315 267-402 (520)
247 PRK13943 protein-L-isoaspartat 96.7 0.018 3.9E-07 54.5 10.8 101 207-312 74-179 (322)
248 PRK07453 protochlorophyllide o 96.6 0.0046 1E-07 58.8 6.9 80 213-292 5-92 (322)
249 PRK12429 3-hydroxybutyrate deh 96.6 0.014 3.1E-07 53.2 9.9 80 213-292 3-90 (258)
250 PRK06125 short chain dehydroge 96.6 0.012 2.5E-07 54.0 9.2 79 213-293 6-91 (259)
251 PRK07370 enoyl-(acyl carrier p 96.6 0.03 6.4E-07 51.4 11.8 81 213-293 5-97 (258)
252 PRK06077 fabG 3-ketoacyl-(acyl 96.6 0.016 3.6E-07 52.6 10.1 103 213-315 5-142 (252)
253 PRK09242 tropinone reductase; 96.6 0.014 3E-07 53.4 9.6 81 213-293 8-98 (257)
254 PRK07825 short chain dehydroge 96.6 0.0098 2.1E-07 55.0 8.7 78 213-293 4-88 (273)
255 PRK05557 fabG 3-ketoacyl-(acyl 96.6 0.028 6.1E-07 50.8 11.6 81 213-293 4-93 (248)
256 PRK06940 short chain dehydroge 96.6 0.031 6.7E-07 51.8 11.9 78 214-293 2-86 (275)
257 PRK07666 fabG 3-ketoacyl-(acyl 96.6 0.014 2.9E-07 52.8 9.3 81 213-293 6-94 (239)
258 PRK07774 short chain dehydroge 96.6 0.014 3.1E-07 53.0 9.4 81 213-293 5-93 (250)
259 PF02826 2-Hacid_dh_C: D-isome 96.6 0.01 2.2E-07 51.3 7.9 87 212-313 34-127 (178)
260 PRK06138 short chain dehydroge 96.6 0.013 2.8E-07 53.3 9.2 80 213-293 4-91 (252)
261 PRK06720 hypothetical protein; 96.6 0.021 4.5E-07 48.9 9.7 80 213-292 15-102 (169)
262 PRK08063 enoyl-(acyl carrier p 96.6 0.013 2.8E-07 53.3 9.1 81 213-293 3-92 (250)
263 PLN02657 3,8-divinyl protochlo 96.6 0.022 4.8E-07 55.7 11.2 106 210-315 56-183 (390)
264 PRK08017 oxidoreductase; Provi 96.6 0.012 2.5E-07 53.8 8.8 74 215-293 3-84 (256)
265 PRK08703 short chain dehydroge 96.6 0.01 2.3E-07 53.6 8.3 80 213-293 5-97 (239)
266 PRK06113 7-alpha-hydroxysteroi 96.5 0.014 2.9E-07 53.4 9.1 81 213-293 10-98 (255)
267 TIGR03206 benzo_BadH 2-hydroxy 96.5 0.017 3.6E-07 52.5 9.6 80 213-292 2-89 (250)
268 TIGR02622 CDP_4_6_dhtase CDP-g 96.5 0.034 7.3E-07 53.5 12.2 79 213-292 3-84 (349)
269 PRK05565 fabG 3-ketoacyl-(acyl 96.5 0.013 2.9E-07 52.9 8.9 80 214-293 5-93 (247)
270 PRK06124 gluconate 5-dehydroge 96.5 0.019 4E-07 52.5 9.8 81 213-293 10-98 (256)
271 PRK08263 short chain dehydroge 96.5 0.016 3.5E-07 53.6 9.5 77 214-293 3-87 (275)
272 PRK07775 short chain dehydroge 96.5 0.014 3.1E-07 54.0 9.0 81 213-293 9-97 (274)
273 PRK12481 2-deoxy-D-gluconate 3 96.5 0.019 4E-07 52.5 9.6 79 213-293 7-93 (251)
274 PRK06484 short chain dehydroge 96.5 0.016 3.4E-07 59.0 10.0 78 213-293 4-89 (520)
275 PRK07024 short chain dehydroge 96.5 0.013 2.8E-07 53.7 8.5 36 214-249 2-37 (257)
276 PRK08177 short chain dehydroge 96.5 0.019 4.1E-07 51.4 9.5 75 215-293 2-81 (225)
277 PRK08690 enoyl-(acyl carrier p 96.5 0.014 3E-07 53.7 8.8 80 213-293 5-94 (261)
278 PRK06603 enoyl-(acyl carrier p 96.5 0.016 3.5E-07 53.2 9.2 79 213-292 7-95 (260)
279 TIGR03325 BphB_TodD cis-2,3-di 96.5 0.0078 1.7E-07 55.3 7.0 77 213-292 4-88 (262)
280 PRK10538 malonic semialdehyde 96.5 0.023 4.9E-07 51.7 9.9 75 216-293 2-84 (248)
281 PRK08159 enoyl-(acyl carrier p 96.5 0.019 4.1E-07 53.2 9.5 81 211-292 7-97 (272)
282 PRK12826 3-ketoacyl-(acyl-carr 96.4 0.0076 1.7E-07 54.7 6.7 81 213-293 5-93 (251)
283 PRK06197 short chain dehydroge 96.4 0.018 4E-07 54.2 9.5 80 213-292 15-104 (306)
284 cd01078 NAD_bind_H4MPT_DH NADP 96.4 0.046 1E-06 47.8 11.4 81 213-295 27-109 (194)
285 CHL00194 ycf39 Ycf39; Provisio 96.4 0.023 5E-07 53.9 10.1 94 216-315 2-111 (317)
286 PRK05875 short chain dehydroge 96.4 0.016 3.5E-07 53.6 8.9 80 213-292 6-95 (276)
287 cd01080 NAD_bind_m-THF_DH_Cycl 96.4 0.027 5.9E-07 48.0 9.5 95 191-314 21-117 (168)
288 PRK12743 oxidoreductase; Provi 96.4 0.023 5E-07 51.9 9.7 78 214-293 2-90 (256)
289 TIGR01832 kduD 2-deoxy-D-gluco 96.4 0.024 5.1E-07 51.5 9.7 79 213-293 4-90 (248)
290 PRK06180 short chain dehydroge 96.4 0.0087 1.9E-07 55.6 6.9 77 213-293 3-88 (277)
291 PRK07102 short chain dehydroge 96.4 0.021 4.5E-07 51.7 9.3 77 215-293 2-86 (243)
292 PRK05650 short chain dehydroge 96.4 0.0098 2.1E-07 54.9 7.2 78 216-293 2-87 (270)
293 PRK07792 fabG 3-ketoacyl-(acyl 96.4 0.024 5.3E-07 53.5 10.0 81 213-293 11-99 (306)
294 TIGR00406 prmA ribosomal prote 96.4 0.067 1.4E-06 50.1 12.7 147 151-313 105-259 (288)
295 TIGR00080 pimt protein-L-isoas 96.4 0.026 5.6E-07 50.4 9.5 104 206-313 70-177 (215)
296 PRK06718 precorrin-2 dehydroge 96.4 0.13 2.9E-06 45.3 13.7 92 213-313 9-100 (202)
297 PRK08278 short chain dehydroge 96.4 0.02 4.3E-07 53.0 9.0 81 213-293 5-100 (273)
298 PRK06483 dihydromonapterin red 96.4 0.026 5.6E-07 50.9 9.6 77 214-293 2-84 (236)
299 PRK07074 short chain dehydroge 96.4 0.014 3.1E-07 53.3 8.0 80 214-293 2-87 (257)
300 PRK12367 short chain dehydroge 96.3 0.014 2.9E-07 53.3 7.7 76 213-293 13-89 (245)
301 PRK06841 short chain dehydroge 96.3 0.0095 2.1E-07 54.4 6.7 37 213-249 14-50 (255)
302 PRK13944 protein-L-isoaspartat 96.3 0.039 8.4E-07 48.9 10.3 102 207-313 66-173 (205)
303 PRK07424 bifunctional sterol d 96.3 0.013 2.9E-07 57.3 7.9 76 213-293 177-255 (406)
304 TIGR01035 hemA glutamyl-tRNA r 96.3 0.037 7.9E-07 54.7 11.0 143 132-295 88-252 (417)
305 PLN02253 xanthoxin dehydrogena 96.3 0.016 3.4E-07 53.9 8.0 37 213-249 17-53 (280)
306 KOG0725|consensus 96.3 0.028 6.1E-07 52.0 9.5 82 212-293 6-99 (270)
307 COG1748 LYS9 Saccharopine dehy 96.3 0.016 3.6E-07 55.8 8.1 92 215-313 2-99 (389)
308 PRK14175 bifunctional 5,10-met 96.3 0.045 9.9E-07 50.6 10.6 96 192-315 136-232 (286)
309 COG2242 CobL Precorrin-6B meth 96.2 0.042 9.1E-07 47.1 9.4 100 209-313 30-135 (187)
310 PF05368 NmrA: NmrA-like famil 96.2 0.042 9.2E-07 49.5 10.3 90 217-310 1-99 (233)
311 PRK12746 short chain dehydroge 96.2 0.038 8.3E-07 50.3 10.0 81 213-293 5-100 (254)
312 PLN00141 Tic62-NAD(P)-related 96.2 0.036 7.8E-07 50.6 9.6 99 213-315 16-133 (251)
313 PRK08251 short chain dehydroge 96.2 0.037 8.1E-07 50.2 9.6 79 214-292 2-90 (248)
314 PRK08993 2-deoxy-D-gluconate 3 96.2 0.043 9.3E-07 50.1 10.1 79 213-293 9-95 (253)
315 PRK12548 shikimate 5-dehydroge 96.2 0.057 1.2E-06 50.5 11.0 77 213-292 125-208 (289)
316 TIGR01963 PHB_DH 3-hydroxybuty 96.1 0.035 7.6E-07 50.5 9.4 80 214-293 1-88 (255)
317 PRK09135 pteridine reductase; 96.1 0.027 5.9E-07 50.9 8.6 80 213-292 5-94 (249)
318 PRK12935 acetoacetyl-CoA reduc 96.1 0.03 6.6E-07 50.7 8.9 81 213-293 5-94 (247)
319 TIGR02632 RhaD_aldol-ADH rhamn 96.1 0.021 4.5E-07 60.1 8.7 117 166-293 377-503 (676)
320 PLN02240 UDP-glucose 4-epimera 96.1 0.069 1.5E-06 51.3 11.7 81 213-293 4-91 (352)
321 PRK05599 hypothetical protein; 96.1 0.029 6.3E-07 51.0 8.6 77 216-293 2-87 (246)
322 TIGR01470 cysG_Nterm siroheme 96.1 0.21 4.6E-06 44.1 13.8 92 213-313 8-100 (205)
323 PRK07069 short chain dehydroge 96.1 0.057 1.2E-06 49.0 10.6 78 216-293 1-89 (251)
324 PRK09134 short chain dehydroge 96.1 0.032 6.9E-07 51.1 8.9 81 213-293 8-97 (258)
325 PRK06997 enoyl-(acyl carrier p 96.1 0.031 6.8E-07 51.3 8.8 80 213-293 5-94 (260)
326 PRK03369 murD UDP-N-acetylmura 96.1 0.026 5.7E-07 57.0 8.9 73 210-294 8-81 (488)
327 PRK07984 enoyl-(acyl carrier p 96.1 0.043 9.3E-07 50.5 9.6 79 213-292 5-93 (262)
328 PLN02730 enoyl-[acyl-carrier-p 96.0 0.084 1.8E-06 49.7 11.5 31 213-243 8-40 (303)
329 TIGR01829 AcAcCoA_reduct aceto 96.0 0.045 9.7E-07 49.3 9.4 79 215-293 1-88 (242)
330 PRK06463 fabG 3-ketoacyl-(acyl 96.0 0.051 1.1E-06 49.6 9.9 78 213-293 6-89 (255)
331 PRK08226 short chain dehydroge 96.0 0.052 1.1E-06 49.7 10.0 79 213-292 5-91 (263)
332 PRK08416 7-alpha-hydroxysteroi 96.0 0.035 7.6E-07 50.9 8.8 35 213-247 7-41 (260)
333 PF00670 AdoHcyase_NAD: S-aden 96.0 0.075 1.6E-06 44.7 9.8 91 211-315 20-112 (162)
334 PRK07067 sorbitol dehydrogenas 96.0 0.019 4.1E-07 52.5 7.0 77 213-292 5-89 (257)
335 PRK12384 sorbitol-6-phosphate 96.0 0.034 7.4E-07 50.8 8.6 79 214-292 2-90 (259)
336 PRK06482 short chain dehydroge 96.0 0.019 4.1E-07 53.2 6.9 76 215-293 3-86 (276)
337 TIGR02415 23BDH acetoin reduct 96.0 0.052 1.1E-06 49.4 9.8 79 215-293 1-87 (254)
338 PRK08936 glucose-1-dehydrogena 96.0 0.057 1.2E-06 49.5 10.1 81 213-293 6-95 (261)
339 PRK05717 oxidoreductase; Valid 96.0 0.038 8.1E-07 50.5 8.8 78 213-293 9-94 (255)
340 PRK06719 precorrin-2 dehydroge 96.0 0.11 2.4E-06 43.9 10.8 88 213-312 12-99 (157)
341 COG0169 AroE Shikimate 5-dehyd 96.0 0.046 1E-06 50.6 9.1 106 201-313 111-226 (283)
342 PRK09730 putative NAD(P)-bindi 96.0 0.054 1.2E-06 49.0 9.7 79 215-293 2-89 (247)
343 PRK07201 short chain dehydroge 96.0 0.035 7.6E-07 58.3 9.5 80 214-293 371-458 (657)
344 TIGR02469 CbiT precorrin-6Y C5 96.0 0.086 1.9E-06 42.0 9.8 103 207-313 13-122 (124)
345 PRK05855 short chain dehydroge 95.9 0.041 8.9E-07 56.6 9.7 81 213-293 314-402 (582)
346 PRK08264 short chain dehydroge 95.9 0.043 9.4E-07 49.4 8.7 72 213-293 5-83 (238)
347 TIGR01289 LPOR light-dependent 95.9 0.044 9.6E-07 51.9 9.0 80 214-293 3-91 (314)
348 PRK13940 glutamyl-tRNA reducta 95.9 0.082 1.8E-06 52.0 11.0 77 212-296 179-255 (414)
349 PRK10675 UDP-galactose-4-epime 95.9 0.11 2.3E-06 49.7 11.7 77 216-292 2-82 (338)
350 PRK12549 shikimate 5-dehydroge 95.9 0.068 1.5E-06 49.8 10.0 95 213-313 126-227 (284)
351 PRK06398 aldose dehydrogenase; 95.9 0.013 2.9E-07 53.7 5.3 36 213-248 5-40 (258)
352 PRK12744 short chain dehydroge 95.9 0.065 1.4E-06 48.9 9.8 81 213-293 7-99 (257)
353 PF02670 DXP_reductoisom: 1-de 95.9 0.17 3.6E-06 41.0 10.8 94 217-311 1-119 (129)
354 PRK07577 short chain dehydroge 95.9 0.018 3.9E-07 51.8 5.9 72 213-293 2-78 (234)
355 PRK14967 putative methyltransf 95.8 0.13 2.8E-06 46.1 11.3 99 209-313 32-159 (223)
356 PRK06953 short chain dehydroge 95.8 0.048 1E-06 48.7 8.5 75 215-293 2-80 (222)
357 KOG1209|consensus 95.8 0.069 1.5E-06 46.6 8.8 99 213-315 6-140 (289)
358 PF01262 AlaDh_PNT_C: Alanine 95.8 0.02 4.3E-07 49.0 5.6 97 214-317 20-143 (168)
359 PRK12825 fabG 3-ketoacyl-(acyl 95.8 0.065 1.4E-06 48.3 9.4 80 213-292 5-93 (249)
360 PRK07402 precorrin-6B methylas 95.8 0.2 4.4E-06 43.9 12.1 106 204-313 31-142 (196)
361 PRK06947 glucose-1-dehydrogena 95.8 0.074 1.6E-06 48.2 9.7 78 215-292 3-89 (248)
362 PRK04148 hypothetical protein; 95.7 0.06 1.3E-06 43.8 7.7 88 211-307 14-102 (134)
363 PRK12745 3-ketoacyl-(acyl-carr 95.7 0.078 1.7E-06 48.3 9.7 79 215-293 3-90 (256)
364 PF13561 adh_short_C2: Enoyl-( 95.7 0.15 3.3E-06 46.1 11.5 161 221-389 1-222 (241)
365 PRK06123 short chain dehydroge 95.7 0.077 1.7E-06 48.1 9.6 80 214-293 2-90 (248)
366 PRK12827 short chain dehydroge 95.7 0.066 1.4E-06 48.4 9.1 81 213-293 5-97 (249)
367 PRK05884 short chain dehydroge 95.7 0.078 1.7E-06 47.4 9.3 72 216-292 2-78 (223)
368 PRK12936 3-ketoacyl-(acyl-carr 95.7 0.034 7.5E-07 50.2 7.1 78 213-293 5-90 (245)
369 PRK07889 enoyl-(acyl carrier p 95.7 0.058 1.3E-06 49.4 8.6 80 213-293 6-95 (256)
370 PRK13656 trans-2-enoyl-CoA red 95.6 0.071 1.5E-06 51.4 9.2 80 212-294 39-142 (398)
371 PRK07856 short chain dehydroge 95.6 0.058 1.3E-06 49.1 8.3 36 213-248 5-40 (252)
372 COG2264 PrmA Ribosomal protein 95.6 0.27 5.8E-06 45.8 12.5 151 151-315 108-265 (300)
373 PRK08220 2,3-dihydroxybenzoate 95.6 0.08 1.7E-06 48.1 9.2 35 213-247 7-41 (252)
374 PRK08309 short chain dehydroge 95.5 0.34 7.4E-06 41.7 12.4 91 216-307 2-99 (177)
375 PRK08618 ornithine cyclodeamin 95.5 0.15 3.2E-06 48.7 11.0 103 213-324 126-232 (325)
376 TIGR01809 Shik-DH-AROM shikima 95.5 0.054 1.2E-06 50.5 7.8 73 213-294 124-201 (282)
377 PRK00107 gidB 16S rRNA methylt 95.5 0.15 3.2E-06 44.4 10.1 99 210-313 42-145 (187)
378 PRK06179 short chain dehydroge 95.5 0.021 4.6E-07 52.6 5.2 75 213-293 3-83 (270)
379 PRK05447 1-deoxy-D-xylulose 5- 95.5 0.19 4E-06 48.5 11.4 96 215-311 2-120 (385)
380 KOG1610|consensus 95.5 0.23 4.9E-06 46.1 11.4 80 212-292 27-115 (322)
381 PRK08219 short chain dehydroge 95.4 0.14 3E-06 45.5 10.2 76 214-293 3-81 (227)
382 PRK00258 aroE shikimate 5-dehy 95.4 0.091 2E-06 48.9 9.1 93 212-313 121-221 (278)
383 PRK06523 short chain dehydroge 95.4 0.014 3.1E-07 53.4 3.7 36 213-248 8-43 (260)
384 COG2226 UbiE Methylase involve 95.4 0.15 3.2E-06 46.0 10.0 106 205-314 43-157 (238)
385 PRK11207 tellurite resistance 95.4 0.16 3.5E-06 44.6 10.1 99 209-313 26-134 (197)
386 PRK12748 3-ketoacyl-(acyl-carr 95.4 0.12 2.6E-06 47.1 9.7 35 213-247 4-40 (256)
387 PLN02989 cinnamyl-alcohol dehy 95.3 0.087 1.9E-06 50.0 8.9 78 213-292 4-86 (325)
388 PRK14192 bifunctional 5,10-met 95.3 0.19 4.1E-06 46.7 10.7 95 194-315 139-233 (283)
389 KOG1208|consensus 95.3 0.097 2.1E-06 49.4 8.9 78 213-292 34-123 (314)
390 PRK08642 fabG 3-ketoacyl-(acyl 95.3 0.092 2E-06 47.6 8.6 78 213-292 4-90 (253)
391 PLN02986 cinnamyl-alcohol dehy 95.3 0.08 1.7E-06 50.2 8.3 38 213-250 4-41 (322)
392 PRK07023 short chain dehydroge 95.2 0.097 2.1E-06 47.3 8.5 34 216-249 3-36 (243)
393 TIGR03649 ergot_EASG ergot alk 95.2 0.11 2.3E-06 48.4 8.9 92 216-314 1-105 (285)
394 PRK05562 precorrin-2 dehydroge 95.2 0.83 1.8E-05 40.8 14.0 92 213-313 24-116 (223)
395 KOG1502|consensus 95.2 0.1 2.2E-06 49.0 8.5 74 213-292 5-87 (327)
396 PRK14189 bifunctional 5,10-met 95.2 0.18 3.9E-06 46.6 10.0 94 192-314 136-231 (285)
397 KOG1200|consensus 95.2 0.12 2.6E-06 44.4 8.0 74 214-293 14-100 (256)
398 KOG1207|consensus 95.2 0.041 9E-07 46.3 5.1 77 213-292 6-86 (245)
399 PRK06101 short chain dehydroge 95.1 0.11 2.3E-06 47.0 8.4 34 215-248 2-35 (240)
400 cd05311 NAD_bind_2_malic_enz N 95.1 0.33 7.1E-06 43.6 11.3 103 202-313 13-128 (226)
401 TIGR00438 rrmJ cell division p 95.1 0.49 1.1E-05 41.1 12.1 96 208-313 27-146 (188)
402 PLN00016 RNA-binding protein; 95.1 0.19 4.2E-06 48.9 10.6 98 214-314 52-165 (378)
403 PRK12859 3-ketoacyl-(acyl-carr 95.0 0.14 3E-06 46.8 9.0 33 213-245 5-39 (256)
404 KOG1210|consensus 95.0 0.13 2.8E-06 47.7 8.4 81 211-294 30-123 (331)
405 TIGR03589 PseB UDP-N-acetylglu 95.0 0.096 2.1E-06 49.9 8.0 76 213-293 3-84 (324)
406 PLN02896 cinnamyl-alcohol dehy 95.0 0.12 2.7E-06 49.6 8.9 78 212-292 8-88 (353)
407 COG2519 GCD14 tRNA(1-methylade 95.0 0.28 6.2E-06 44.1 10.2 101 208-313 89-195 (256)
408 PRK07578 short chain dehydroge 94.9 0.34 7.3E-06 42.3 10.9 60 216-293 2-65 (199)
409 PRK15469 ghrA bifunctional gly 94.9 0.18 4E-06 47.6 9.6 86 213-313 135-226 (312)
410 PF01113 DapB_N: Dihydrodipico 94.9 0.038 8.2E-07 44.6 4.3 94 216-314 2-98 (124)
411 COG1648 CysG Siroheme synthase 94.9 0.8 1.7E-05 40.5 12.9 93 213-314 11-104 (210)
412 PRK10792 bifunctional 5,10-met 94.9 0.32 6.9E-06 45.0 10.7 95 192-314 137-232 (285)
413 PRK14027 quinate/shikimate deh 94.9 0.23 5E-06 46.3 9.9 32 213-245 126-157 (283)
414 TIGR01214 rmlD dTDP-4-dehydror 94.8 0.065 1.4E-06 49.8 6.2 31 216-246 1-31 (287)
415 TIGR01472 gmd GDP-mannose 4,6- 94.8 0.12 2.7E-06 49.4 8.3 78 215-292 1-87 (343)
416 TIGR02685 pter_reduc_Leis pter 94.8 0.13 2.8E-06 47.4 8.1 33 215-247 2-34 (267)
417 PRK12749 quinate/shikimate deh 94.8 0.39 8.5E-06 44.8 11.3 77 213-292 123-205 (288)
418 COG2227 UbiG 2-polyprenyl-3-me 94.8 0.27 5.9E-06 43.9 9.5 94 212-312 58-160 (243)
419 TIGR01830 3oxo_ACP_reduc 3-oxo 94.8 0.087 1.9E-06 47.3 6.8 77 217-293 1-86 (239)
420 TIGR02356 adenyl_thiF thiazole 94.8 0.31 6.8E-06 42.9 10.1 35 213-248 20-54 (202)
421 PRK00312 pcm protein-L-isoaspa 94.7 0.24 5.2E-06 44.0 9.4 101 207-313 72-175 (212)
422 TIGR01831 fabG_rel 3-oxoacyl-( 94.7 0.2 4.2E-06 45.1 9.0 76 217-292 1-85 (239)
423 PLN02653 GDP-mannose 4,6-dehyd 94.7 0.089 1.9E-06 50.3 7.0 36 213-248 5-40 (340)
424 PLN02244 tocopherol O-methyltr 94.7 0.17 3.7E-06 48.5 8.9 98 212-313 117-223 (340)
425 PLN02928 oxidoreductase family 94.7 0.14 3.1E-06 49.1 8.3 93 213-313 158-262 (347)
426 PF03435 Saccharop_dh: Sacchar 94.6 0.13 2.9E-06 50.2 8.2 89 217-312 1-97 (386)
427 PRK12824 acetoacetyl-CoA reduc 94.6 0.25 5.5E-06 44.4 9.5 34 215-248 3-36 (245)
428 PRK14191 bifunctional 5,10-met 94.6 0.38 8.3E-06 44.5 10.5 94 192-314 135-230 (285)
429 TIGR03840 TMPT_Se_Te thiopurin 94.6 0.27 5.8E-06 43.8 9.2 97 211-314 32-153 (213)
430 PLN02214 cinnamoyl-CoA reducta 94.6 0.16 3.4E-06 48.8 8.3 80 212-293 8-91 (342)
431 PLN00015 protochlorophyllide r 94.5 0.16 3.4E-06 48.0 8.2 76 218-293 1-85 (308)
432 cd01065 NAD_bind_Shikimate_DH 94.5 0.48 1E-05 39.5 10.3 94 212-314 17-117 (155)
433 PRK10217 dTDP-glucose 4,6-dehy 94.5 0.12 2.7E-06 49.6 7.6 78 215-293 2-84 (355)
434 PLN02366 spermidine synthase 94.5 0.49 1.1E-05 44.6 11.2 96 212-313 90-206 (308)
435 TIGR00477 tehB tellurite resis 94.4 0.33 7.1E-06 42.5 9.4 99 209-313 26-133 (195)
436 COG3288 PntA NAD/NADP transhyd 94.4 1.4 3.1E-05 40.8 13.4 148 210-365 160-335 (356)
437 PRK14106 murD UDP-N-acetylmura 94.4 0.21 4.5E-06 49.9 9.1 74 213-293 4-78 (450)
438 PLN02695 GDP-D-mannose-3',5'-e 94.4 0.29 6.3E-06 47.5 9.8 75 212-292 19-94 (370)
439 PF01118 Semialdhyde_dh: Semia 94.4 0.17 3.7E-06 40.6 6.9 93 216-314 1-98 (121)
440 PRK06171 sorbitol-6-phosphate 94.3 0.043 9.4E-07 50.4 3.8 37 213-249 8-44 (266)
441 TIGR01179 galE UDP-glucose-4-e 94.3 0.16 3.5E-06 47.9 7.8 78 216-293 1-80 (328)
442 cd05212 NAD_bind_m-THF_DH_Cycl 94.3 0.57 1.2E-05 38.6 9.9 94 192-314 6-101 (140)
443 PF08659 KR: KR domain; Inter 94.3 0.39 8.4E-06 41.5 9.5 49 216-264 2-54 (181)
444 TIGR01318 gltD_gamma_fam gluta 94.3 0.18 3.8E-06 50.7 8.3 79 213-294 140-237 (467)
445 PRK12550 shikimate 5-dehydroge 94.3 0.5 1.1E-05 43.7 10.6 77 201-292 110-187 (272)
446 COG1179 Dinucleotide-utilizing 94.3 0.65 1.4E-05 41.5 10.6 103 213-317 29-157 (263)
447 PF08704 GCD14: tRNA methyltra 94.3 0.28 6E-06 44.6 8.7 104 207-313 34-146 (247)
448 PRK07041 short chain dehydroge 94.3 0.18 4E-06 45.0 7.7 73 218-293 1-79 (230)
449 COG0031 CysK Cysteine synthase 94.2 0.31 6.7E-06 45.3 9.0 64 202-268 51-114 (300)
450 PRK15181 Vi polysaccharide bio 94.2 0.25 5.5E-06 47.5 9.0 48 200-248 2-49 (348)
451 PRK11150 rfaD ADP-L-glycero-D- 94.1 0.18 4E-06 47.4 7.5 33 217-249 2-34 (308)
452 TIGR01500 sepiapter_red sepiap 94.0 0.34 7.3E-06 44.2 9.1 44 216-259 2-49 (256)
453 cd01075 NAD_bind_Leu_Phe_Val_D 94.0 0.74 1.6E-05 40.5 10.7 79 213-304 27-107 (200)
454 cd00755 YgdL_like Family of ac 94.0 2.1 4.5E-05 38.6 13.6 34 214-248 11-44 (231)
455 PRK08300 acetaldehyde dehydrog 93.9 0.49 1.1E-05 44.2 9.8 95 215-313 5-100 (302)
456 KOG1252|consensus 93.9 0.33 7.1E-06 45.4 8.5 60 208-268 97-156 (362)
457 TIGR00563 rsmB ribosomal RNA s 93.9 0.55 1.2E-05 46.6 10.9 102 209-313 234-368 (426)
458 PLN02662 cinnamyl-alcohol dehy 93.9 0.26 5.7E-06 46.6 8.3 37 213-249 3-39 (322)
459 PRK01581 speE spermidine synth 93.9 0.83 1.8E-05 43.8 11.4 94 213-313 150-268 (374)
460 PRK14188 bifunctional 5,10-met 93.9 0.56 1.2E-05 43.8 10.1 95 192-315 136-232 (296)
461 PRK14176 bifunctional 5,10-met 93.9 0.65 1.4E-05 43.0 10.4 95 192-314 142-237 (287)
462 PRK12809 putative oxidoreducta 93.8 0.23 5E-06 52.0 8.4 79 213-294 309-406 (639)
463 KOG4169|consensus 93.8 0.29 6.3E-06 43.3 7.6 101 214-315 5-138 (261)
464 PRK07574 formate dehydrogenase 93.8 0.54 1.2E-05 45.8 10.2 35 213-248 191-225 (385)
465 PF01370 Epimerase: NAD depend 93.8 0.12 2.6E-06 46.2 5.6 74 217-293 1-75 (236)
466 PLN00198 anthocyanidin reducta 93.8 0.27 5.9E-06 46.9 8.3 77 213-292 8-89 (338)
467 PLN02650 dihydroflavonol-4-red 93.8 0.35 7.5E-06 46.5 9.0 38 213-250 4-41 (351)
468 PRK02472 murD UDP-N-acetylmura 93.8 0.29 6.3E-06 48.8 8.7 75 213-293 4-78 (447)
469 PRK08287 cobalt-precorrin-6Y C 93.8 1.2 2.6E-05 38.5 11.6 109 197-312 15-130 (187)
470 TIGR00715 precor6x_red precorr 93.7 0.14 3E-06 46.9 5.8 73 216-293 2-75 (256)
471 COG0373 HemA Glutamyl-tRNA red 93.7 0.76 1.7E-05 44.8 11.0 74 213-296 177-251 (414)
472 COG0686 Ald Alanine dehydrogen 93.7 0.36 7.8E-06 44.7 8.2 91 215-316 169-271 (371)
473 PRK00811 spermidine synthase; 93.7 0.63 1.4E-05 43.4 10.2 95 212-313 75-191 (283)
474 COG4122 Predicted O-methyltran 93.7 0.72 1.6E-05 41.0 10.0 101 209-312 55-165 (219)
475 PLN02781 Probable caffeoyl-CoA 93.6 0.61 1.3E-05 42.1 9.8 104 207-312 62-177 (234)
476 COG0334 GdhA Glutamate dehydro 93.6 0.96 2.1E-05 43.8 11.3 58 189-249 183-241 (411)
477 PRK10901 16S rRNA methyltransf 93.6 0.74 1.6E-05 45.7 11.2 103 209-313 240-372 (427)
478 COG1028 FabG Dehydrogenases wi 93.6 0.38 8.2E-06 43.6 8.5 37 213-249 4-40 (251)
479 PRK00048 dihydrodipicolinate r 93.6 0.49 1.1E-05 43.4 9.2 88 216-314 3-91 (257)
480 PRK14103 trans-aconitate 2-met 93.6 1 2.2E-05 41.2 11.3 95 207-312 23-125 (255)
481 KOG1014|consensus 93.5 0.46 9.9E-06 44.1 8.7 82 212-293 47-136 (312)
482 PRK14194 bifunctional 5,10-met 93.5 0.74 1.6E-05 43.0 10.2 95 192-314 137-232 (301)
483 cd05211 NAD_bind_Glu_Leu_Phe_V 93.5 0.77 1.7E-05 40.9 9.9 36 213-249 22-57 (217)
484 PRK13255 thiopurine S-methyltr 93.5 0.48 1E-05 42.3 8.7 97 210-313 34-155 (218)
485 PF03807 F420_oxidored: NADP o 93.4 0.92 2E-05 34.3 9.2 85 216-312 1-93 (96)
486 PLN03139 formate dehydrogenase 93.4 0.57 1.2E-05 45.6 9.7 34 213-247 198-231 (386)
487 TIGR03466 HpnA hopanoid-associ 93.4 0.19 4.1E-06 47.5 6.4 71 216-292 2-73 (328)
488 PRK12475 thiamine/molybdopteri 93.4 0.65 1.4E-05 44.4 9.9 35 213-248 23-57 (338)
489 PRK13243 glyoxylate reductase; 93.3 0.53 1.1E-05 45.0 9.3 35 213-248 149-183 (333)
490 PF01209 Ubie_methyltran: ubiE 93.3 0.13 2.9E-06 46.4 4.9 102 209-314 43-154 (233)
491 TIGR02992 ectoine_eutC ectoine 93.3 0.82 1.8E-05 43.6 10.5 97 212-316 127-227 (326)
492 PRK07340 ornithine cyclodeamin 93.3 0.84 1.8E-05 43.0 10.4 101 212-323 123-227 (304)
493 TIGR03215 ac_ald_DH_ac acetald 93.2 1 2.2E-05 41.9 10.6 91 216-313 3-94 (285)
494 TIGR01181 dTDP_gluc_dehyt dTDP 93.2 0.32 6.9E-06 45.6 7.6 78 216-293 1-83 (317)
495 cd01483 E1_enzyme_family Super 93.2 0.72 1.6E-05 38.0 8.9 32 216-248 1-32 (143)
496 PRK08317 hypothetical protein; 93.2 0.64 1.4E-05 41.6 9.3 99 207-313 13-124 (241)
497 PRK14180 bifunctional 5,10-met 93.2 0.92 2E-05 41.9 10.2 96 192-314 136-231 (282)
498 PRK07502 cyclohexadienyl dehyd 93.2 0.69 1.5E-05 43.6 9.8 89 215-314 7-101 (307)
499 PRK09987 dTDP-4-dehydrorhamnos 93.2 0.21 4.6E-06 46.9 6.3 62 216-292 2-63 (299)
500 PF13241 NAD_binding_7: Putati 93.1 0.27 5.8E-06 38.2 5.8 86 213-314 6-92 (103)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=3.2e-59 Score=430.95 Aligned_cols=307 Identities=26% Similarity=0.398 Sum_probs=277.1
Q ss_pred ccceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCC
Q psy2960 70 SYLANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDV 149 (405)
Q Consensus 70 ~~~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v 149 (405)
|++|||+++.++++| ++++++|.|+|+++||+|+|+|||+|++|+|.+.|.++.. .+|++||||.+|+|+++|++|
T Consensus 1 ~~~mkA~~~~~~~~p---l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~-~~P~ipGHEivG~V~~vG~~V 76 (339)
T COG1064 1 MMTMKAAVLKKFGQP---LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVP-KLPLIPGHEIVGTVVEVGEGV 76 (339)
T ss_pred CcceEEEEEccCCCC---ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCC-CCCccCCcceEEEEEEecCCC
Confidence 578999999999998 8999999999999999999999999999999999999875 599999999999999999999
Q ss_pred CCCCCCCEEEe-cC--------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHH
Q psy2960 150 SSLAVGDHVIP-DT--------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAY 202 (405)
Q Consensus 150 ~~~~~GdrV~~-~~--------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~ 202 (405)
++|++||||.. +. ..+|+|+||+++++++++++|+++++++||.+.|++.|.|
T Consensus 77 ~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y 156 (339)
T COG1064 77 TGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTY 156 (339)
T ss_pred ccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEe
Confidence 99999999987 31 2369999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-Hhhhc
Q psy2960 203 RMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDA 279 (405)
Q Consensus 203 ~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t 279 (405)
.+|+. .+++||++|+|+|+ ||+|++++|+|+++|++|+++.+++++ ++.++++|++++++..+ ..+ +++.
T Consensus 157 ~alk~-~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K----~e~a~~lGAd~~i~~~~~~~~~~~~~~- 229 (339)
T COG1064 157 RALKK-ANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEK----LELAKKLGADHVINSSDSDALEAVKEI- 229 (339)
T ss_pred eehhh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHH----HHHHHHhCCcEEEEcCCchhhHHhHhh-
Confidence 99988 89999999999999 799999999999999999999877554 78999999999999753 222 4332
Q ss_pred CCCCCcEEEECCCchhHHHHHHhcccCCEEEEEeccC-CCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHH
Q psy2960 280 SIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMS-REPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNE 358 (405)
Q Consensus 280 ~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 358 (405)
+|++||+++...+..++++|+++|+++.+|... .....++...++.+++++.|+..++ ..++++
T Consensus 230 ----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~-----------~~d~~e 294 (339)
T COG1064 230 ----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT-----------RADLEE 294 (339)
T ss_pred ----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC-----------HHHHHH
Confidence 899999999666678999999999999999764 3334566777888999999999876 456889
Q ss_pred HHHHHHcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEec
Q psy2960 359 LTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 404 (405)
Q Consensus 359 ~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~~ 404 (405)
++++..+|+++|.+.+.++++|+++||+.|. +++..|++||++.
T Consensus 295 ~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~--~g~v~gR~Vi~~~ 338 (339)
T COG1064 295 ALDFAAEGKIKPEILETIPLDEINEAYERME--KGKVRGRAVIDMS 338 (339)
T ss_pred HHHHHHhCCceeeEEeeECHHHHHHHHHHHH--cCCeeeEEEecCC
Confidence 9999999999998778999999999999999 9999999999875
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=7.9e-57 Score=425.25 Aligned_cols=320 Identities=27% Similarity=0.395 Sum_probs=284.0
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++.+++.|.. +++++.|.|+|++|||||||+|+|||+.|++.+.|..+...++|+++|.|++|+|+++|++|++|
T Consensus 1 mka~~~~~~g~~~~-l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~ 79 (326)
T COG0604 1 MKAVVVEEFGGPEV-LKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGF 79 (326)
T ss_pred CeEEEEeccCCCce-eEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCc
Confidence 78999999999866 99999999999999999999999999999999999744334689999999999999999999999
Q ss_pred CCCCEEEecC-C-CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHH
Q psy2960 153 AVGDHVIPDT-Q-HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNV 230 (405)
Q Consensus 153 ~~GdrV~~~~-~-~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~a 230 (405)
++||||+... . ..|+|+||+.++++.++++|+++|+++||+++++++|||+++....++++|++|||+||+|+||+++
T Consensus 80 ~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~a 159 (326)
T COG0604 80 KVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAA 159 (326)
T ss_pred CCCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHH
Confidence 9999999983 2 4699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCC
Q psy2960 231 IQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKG 307 (405)
Q Consensus 231 iqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G 307 (405)
+|+||++|+.+++++++.++ .+.++++|+|+++++++ +.+ ++++|+++++|+|+|++|++.+..++++|+++|
T Consensus 160 iQlAk~~G~~~v~~~~s~~k----~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G 235 (326)
T COG0604 160 IQLAKALGATVVAVVSSSEK----LELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGG 235 (326)
T ss_pred HHHHHHcCCcEEEEecCHHH----HHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhccCC
Confidence 99999999888888866543 45889999999999754 777 999999999999999999999999999999999
Q ss_pred EEEEEeccC-CCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHH
Q psy2960 308 VMVTYGGMS-REPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALM 386 (405)
Q Consensus 308 ~~v~~g~~~-~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~ 386 (405)
+++.+|... .....++...++.+.++..++..... . ++...+.++++.+++++|.+++.+..+||+++..+|..
T Consensus 236 ~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~---~--~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a 310 (326)
T COG0604 236 RLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSR---D--PEALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAA 310 (326)
T ss_pred EEEEEecCCCCCccccCHHHHhhccEEEEEecceec---c--hHHHHHHHHHHHHHHHcCCCcceeccEechhhhHHHHH
Confidence 999999776 34445566667778888888876643 1 25667889999999999999999999999999777777
Q ss_pred HHhhhcCCCCceEEEEe
Q psy2960 387 NTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 387 ~~~~~~~~~~gKvvl~~ 403 (405)
+... .+++.||+||++
T Consensus 311 ~~~~-~~~~~GKvvl~~ 326 (326)
T COG0604 311 HLLL-ERRTTGKVVLKV 326 (326)
T ss_pred HHHc-ccCCcceEEEeC
Confidence 6662 248899999975
No 3
>KOG1202|consensus
Probab=100.00 E-value=1.2e-58 Score=461.93 Aligned_cols=347 Identities=18% Similarity=0.189 Sum_probs=312.0
Q ss_pred cchhhhhhhhhccceeeeecchhhhhhhhCCcccchhHHHHHHHhhhcccccceeeccccccCCcccceeEEEEccCCCC
Q psy2960 5 KGLFMNVFKTYQAGSLRFISSKKLVFHEFGEPAKVVNVVEEELLKVMSTELCTYISLLDTSARGFSYLANKLVYNQHGTP 84 (405)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~ 84 (405)
|||++|||++|+||||||+.......+.+ ..+.+.++.++|+++|
T Consensus 1384 ~DLv~NvyrdGaWGs~RHl~le~~~~~~~-~ehAfvntLtrGDlsS---------------------------------- 1428 (2376)
T KOG1202|consen 1384 KDLVMNVYRDGAWGSFRHLKLEEDKPELP-VEHAFVNTLTRGDLSS---------------------------------- 1428 (2376)
T ss_pred hhhhhhhhhcCcccceeeeEecccCCCcc-hHHHHHHHhhhccccc----------------------------------
Confidence 79999999999999999998654333333 2255788888888888
Q ss_pred ccceEeeeecCC---CCCCCeEEEEEEEeecChhhhhhhcccCCCC------CCCCCCCccceEEEEEEEcCCCCCCCCC
Q psy2960 85 LRVVTVENETLN---SVQKHEVVVKMLVAPVNPADINTIQGVYPIK------PTLPAVPGFEGVGEVVEVGSDVSSLAVG 155 (405)
Q Consensus 85 ~~~l~~~~~~~p---~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~------~~~p~~lG~E~~G~V~~vG~~v~~~~~G 155 (405)
++|.+.|.. +..++.-+.-|.|+.||++|++.+.|+++.. ....+++|.||+|+-.. |
T Consensus 1429 ---lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd~~----------G 1495 (2376)
T KOG1202|consen 1429 ---LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRDAS----------G 1495 (2376)
T ss_pred ---eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccccCC----------C
Confidence 888888875 4578889999999999999999999987643 13448999999998665 9
Q ss_pred CEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHH
Q psy2960 156 DHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIAR 235 (405)
Q Consensus 156 drV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~ 235 (405)
.|||++.+ --++++.+.++.+++|.+|++|+++||+++|+.|.||||||..++..++|+++|||+++||||++||.+|.
T Consensus 1496 rRvM~mvp-AksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiAL 1574 (2376)
T KOG1202|consen 1496 RRVMGMVP-AKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIAL 1574 (2376)
T ss_pred cEEEEeee-hhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHH
Confidence 99999954 47899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEE
Q psy2960 236 HWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTY 312 (405)
Q Consensus 236 ~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~ 312 (405)
+.||+||+|++|.|++++.+..++++...++.|++| |++ ++..|+|+|+|+|+|++..+.++++++||+.+|||.++
T Consensus 1575 a~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEI 1654 (2376)
T KOG1202|consen 1575 AHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEI 1654 (2376)
T ss_pred HcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeee
Confidence 999999999999999999999999999999999987 888 99999999999999999999999999999999999999
Q ss_pred eccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHHhhhc
Q psy2960 313 GGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQ 392 (405)
Q Consensus 313 g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~ 392 (405)
|+.+-+..+...+..+.||.++||+.+++.+.... +++.+....+.+.|++|.++|+++++|+-+++++|||+|. +
T Consensus 1655 GKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~--e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMa--s 1730 (2376)
T KOG1202|consen 1655 GKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEE--EMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMA--S 1730 (2376)
T ss_pred cceecccCCcchhhhhhcccceeeeehhhhhcCcH--HHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHh--c
Confidence 99887777667788899999999999999887553 6667777777888889999999999999999999999999 9
Q ss_pred CCCCceEEEEec
Q psy2960 393 GKSGVKYYIDFR 404 (405)
Q Consensus 393 ~~~~gKvvl~~~ 404 (405)
|+|+||||+++.
T Consensus 1731 GKHIGKVvikvr 1742 (2376)
T KOG1202|consen 1731 GKHIGKVVIKVR 1742 (2376)
T ss_pred cCccceEEEEEc
Confidence 999999999985
No 4
>KOG1197|consensus
Probab=100.00 E-value=1.2e-55 Score=379.93 Aligned_cols=327 Identities=22% Similarity=0.279 Sum_probs=295.4
Q ss_pred CCcccceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEc
Q psy2960 67 RGFSYLANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVG 146 (405)
Q Consensus 67 ~~~~~~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG 146 (405)
+..|+..|.+++++.|.. ++++|++.|.|+|.|+|.+||..|+|+|+.|.+.+.|-+. .++.|++||.|++|+|+++|
T Consensus 3 ~~~p~~~k~i~v~e~Ggy-dvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~-~~plPytpGmEaaGvVvAvG 80 (336)
T KOG1197|consen 3 AASPPLLKCIVVTEFGGY-DVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD-PAPLPYTPGMEAAGVVVAVG 80 (336)
T ss_pred CCCCchheEEEEeccCCc-ceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC-CCCCCcCCCcccceEEEEec
Confidence 356888999999999987 7899999999999999999999999999999999999884 35789999999999999999
Q ss_pred CCCCCCCCCCEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHH
Q psy2960 147 SDVSSLAVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSAC 226 (405)
Q Consensus 147 ~~v~~~~~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~v 226 (405)
++|+++++||||+... ..|.|+|++.+|...+.++|+.+++++||++...++|||.-+++..+++||++||||.|+|||
T Consensus 81 ~gvtdrkvGDrVayl~-~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGV 159 (336)
T KOG1197|consen 81 EGVTDRKVGDRVAYLN-PFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGV 159 (336)
T ss_pred CCccccccccEEEEec-cchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccH
Confidence 9999999999999884 679999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeCh--hhHHH-HhhhcCCCCCcEEEECCCchhHHHHHHhc
Q psy2960 227 GQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTE--EELRN-ISRDASIPKPKLALNCVGGNSATNLLRTL 303 (405)
Q Consensus 227 G~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~--~d~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l 303 (405)
|++++|++++.|+.++++++++++ ++.+++.|++|.+++ +|+.. +.++|+|+|+|+++|++|.+.+..++.+|
T Consensus 160 Glll~Ql~ra~~a~tI~~asTaeK----~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~L 235 (336)
T KOG1197|consen 160 GLLLCQLLRAVGAHTIATASTAEK----HEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAAL 235 (336)
T ss_pred HHHHHHHHHhcCcEEEEEeccHHH----HHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHHHHHHh
Confidence 999999999999999999988654 789999999999986 56766 99999999999999999999999999999
Q ss_pred ccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHH
Q psy2960 304 VSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQE 383 (405)
Q Consensus 304 ~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~ 383 (405)
++.|.++.+|..++...+++...+-.|.+++..-.+..+ ...+.++.....+++.++.+|.+++.+.++|||+++.+
T Consensus 236 k~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gY---i~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vad 312 (336)
T KOG1197|consen 236 KPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGY---IDGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVAD 312 (336)
T ss_pred ccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcc---cCCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHH
Confidence 999999999987776666776666667776654333322 22346777788999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCceEEEEecC
Q psy2960 384 ALMNTMSIQGKSGVKYYIDFRQ 405 (405)
Q Consensus 384 A~~~~~~~~~~~~gKvvl~~~~ 405 (405)
|+..++ +.+..||+++.+.+
T Consensus 313 A~~die--srktvGkvlLlp~~ 332 (336)
T KOG1197|consen 313 AHADIE--SRKTVGKVLLLPGP 332 (336)
T ss_pred HHHHHH--hhhccceEEEeCCc
Confidence 999999 89999999998753
No 5
>KOG0025|consensus
Probab=100.00 E-value=1.4e-50 Score=354.86 Aligned_cols=339 Identities=53% Similarity=0.854 Sum_probs=309.7
Q ss_pred cccCCcccceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEE
Q psy2960 64 TSARGFSYLANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVV 143 (405)
Q Consensus 64 ~~~~~~~~~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~ 143 (405)
.+...++...|++++.++|+|.+++++.+.++|+...++|+||..|+.|||+|+..++|.||..|++|.+-|.|++|+|+
T Consensus 11 ssa~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv 90 (354)
T KOG0025|consen 11 SSASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVV 90 (354)
T ss_pred ccccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEE
Confidence 34456788899999999999999999999999998888899999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCCEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCC
Q psy2960 144 EVGSDVSSLAVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGAN 223 (405)
Q Consensus 144 ~vG~~v~~~~~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~ 223 (405)
.+|+++++|++||+|+......|.|++|.+.+++.++++++.++++.||++.+..+|||..|.+.-++++||+|.-.||.
T Consensus 91 ~vGs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNgan 170 (354)
T KOG0025|consen 91 AVGSNVKGFKPGDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGAN 170 (354)
T ss_pred EecCCcCccCCCCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcc
Confidence 99999999999999999988889999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHH--Hhhh-cCCCCCcEEEECCCchhHHHHH
Q psy2960 224 SACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN--ISRD-ASIPKPKLALNCVGGNSATNLL 300 (405)
Q Consensus 224 G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~--i~~~-t~g~g~Dvvld~~g~~~~~~~~ 300 (405)
++||++.+|+|+++|.+-+-++|+++..++..+.++.+||++|+..+++.. .++. ....++.+.|||+|+.......
T Consensus 171 S~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~ia 250 (354)
T KOG0025|consen 171 SGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEIA 250 (354)
T ss_pred cHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHHH
Confidence 999999999999999999999999999999999999999999998765432 2222 3456789999999999999999
Q ss_pred HhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhh
Q psy2960 301 RTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKN 380 (405)
Q Consensus 301 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~ 380 (405)
+.|.+||+++.+|+.+..+.+++...+++|+++++|+|+..|......|++..++++++.+++++|+|+.......+|++
T Consensus 251 r~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~ 330 (354)
T KOG0025|consen 251 RYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPLAD 330 (354)
T ss_pred HHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeechh
Confidence 99999999999999999999999999999999999999999998887778999999999999999999998888899999
Q ss_pred HHHHHHHHhhhcCCCCceEEEEe
Q psy2960 381 FQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 381 ~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
...|++...+ .-...||-+|.+
T Consensus 331 ~~tald~~L~-~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 331 HKTALDAALS-KFGKSGKQIIVL 352 (354)
T ss_pred hhHHHHHHHH-HhccCCceEEEe
Confidence 8888876552 223335666654
No 6
>KOG0024|consensus
Probab=100.00 E-value=1.2e-50 Score=362.46 Aligned_cols=311 Identities=22% Similarity=0.299 Sum_probs=267.1
Q ss_pred ccceeEEEEccCCCCccceEeeeecCCCC-CCCeEEEEEEEeecChhhhhhhcccCCCC--CCCCCCCccceEEEEEEEc
Q psy2960 70 SYLANKLVYNQHGTPLRVVTVENETLNSV-QKHEVVVKMLVAPVNPADINTIQGVYPIK--PTLPAVPGFEGVGEVVEVG 146 (405)
Q Consensus 70 ~~~~~a~~~~~~g~~~~~l~~~~~~~p~~-~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~~p~~lG~E~~G~V~~vG 146 (405)
..+|+|+++.++++ +++++.|.|++ .|+||+|++.++|||++|+|++....... .+.|+++|||.+|+|+++|
T Consensus 2 ~~~~~A~vl~g~~d----i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG 77 (354)
T KOG0024|consen 2 AADNLALVLRGKGD----IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVG 77 (354)
T ss_pred CcccceeEEEccCc----eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhc
Confidence 35799999999988 89999999987 99999999999999999999997543322 3579999999999999999
Q ss_pred CCCCCCCCCCEEEecC---------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCCcHH
Q psy2960 147 SDVSSLAVGDHVIPDT---------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPC 199 (405)
Q Consensus 147 ~~v~~~~~GdrV~~~~---------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ 199 (405)
+.|+++++||||+.-+ +.+|++++|++.++++|+++||++|++++|.+. +++
T Consensus 78 ~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLs 156 (354)
T KOG0024|consen 78 DEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIE-PLS 156 (354)
T ss_pred ccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhccccc-chh
Confidence 9999999999999653 236999999999999999999999999999998 599
Q ss_pred HHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh------HH
Q psy2960 200 TAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE------LR 273 (405)
Q Consensus 200 ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d------~~ 273 (405)
+++||.+. +++++|++|||.|| |++|+.+...|+++||..++++ +-.+.|++.++++|++.+.+... +.
T Consensus 157 V~~HAcr~-~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~---d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~ 231 (354)
T KOG0024|consen 157 VGVHACRR-AGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVIT---DLVANRLELAKKFGATVTDPSSHKSSPQELA 231 (354)
T ss_pred hhhhhhhh-cCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEe---ecCHHHHHHHHHhCCeEEeeccccccHHHHH
Confidence 99999976 99999999999999 9999999999999999888887 56678899999999999886432 22
Q ss_pred H-HhhhcCCCCCcEEEECCCchhHH-HHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHH
Q psy2960 274 N-ISRDASIPKPKLALNCVGGNSAT-NLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAE 351 (405)
Q Consensus 274 ~-i~~~t~g~g~Dvvld~~g~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~ 351 (405)
+ +.+..+...+|+.|||+|.+... .++..++++|+++..| ......+++..+...|++++.|++-+.
T Consensus 232 ~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg-~g~~~~~fpi~~v~~kE~~~~g~fry~---------- 300 (354)
T KOG0024|consen 232 ELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVG-MGAEEIQFPIIDVALKEVDLRGSFRYC---------- 300 (354)
T ss_pred HHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEec-cCCCccccChhhhhhheeeeeeeeeec----------
Confidence 3 44444445699999999987765 5799999999977776 455567788888899999999988653
Q ss_pred HHHHHHHHHHHHHcCccc--CCcceeeehhhHHHHHHHHhhhcCC-CCceEEEEec
Q psy2960 352 RKSMMNELTEMMRTGKLA--APAHKFVTLKNFQEALMNTMSIQGK-SGVKYYIDFR 404 (405)
Q Consensus 352 ~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~A~~~~~~~~~~-~~gKvvl~~~ 404 (405)
...+..+++++++|++. +++++.|+++++.+||+.+. .++ ..-|++|+.+
T Consensus 301 -~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~--~~~~~~iKv~i~~~ 353 (354)
T KOG0024|consen 301 -NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQ--HGEEGVIKVIITGP 353 (354)
T ss_pred -cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHH--hCcCCceEEEEeCC
Confidence 34588899999999976 56899999999999999998 444 3679988764
No 7
>KOG0023|consensus
Probab=100.00 E-value=6.2e-50 Score=356.91 Aligned_cols=314 Identities=21% Similarity=0.320 Sum_probs=270.7
Q ss_pred CCcccceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEc
Q psy2960 67 RGFSYLANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVG 146 (405)
Q Consensus 67 ~~~~~~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG 146 (405)
...|.++++|.+..+++. ..+++.+++.|+++++||+|+|.|||||++|+|.+.|.++. ..+|.++|||.+|+|+++|
T Consensus 4 ~~~p~k~~g~~~~~~~G~-l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~-s~~PlV~GHEiaG~VvkvG 81 (360)
T KOG0023|consen 4 MSIPEKQFGWAARDPSGV-LSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL-SKYPLVPGHEIAGVVVKVG 81 (360)
T ss_pred ccCchhhEEEEEECCCCC-CCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc-ccCCccCCceeeEEEEEEC
Confidence 457899999999999875 23677999999999999999999999999999999999998 6899999999999999999
Q ss_pred CCCCCCCCCCEEEecC----------------------------------CCCCcccceEeecccceEEcCCCCChhhhc
Q psy2960 147 SDVSSLAVGDHVIPDT----------------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEIS 192 (405)
Q Consensus 147 ~~v~~~~~GdrV~~~~----------------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa 192 (405)
++|++|++||||-.=. ...|+|++|+++++.++++||+++.++.||
T Consensus 82 s~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aA 161 (360)
T KOG0023|consen 82 SNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAA 161 (360)
T ss_pred CCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhcc
Confidence 9999999999996321 134779999999999999999999999999
Q ss_pred cCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChh-h
Q psy2960 193 GITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE-E 271 (405)
Q Consensus 193 ~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~-d 271 (405)
.+.|++.|+|.+|.. .++.||++|.|.|+ ||+|.+++|+||++|.+|+++.++..+ +.+.++.||||..++.. |
T Consensus 162 PlLCaGITvYspLk~-~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~k---keea~~~LGAd~fv~~~~d 236 (360)
T KOG0023|consen 162 PLLCAGITVYSPLKR-SGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKK---KEEAIKSLGADVFVDSTED 236 (360)
T ss_pred chhhcceEEeehhHH-cCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchh---HHHHHHhcCcceeEEecCC
Confidence 999999999999987 78999999999999 669999999999999999999877533 45777889999998765 3
Q ss_pred --HHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhcc
Q psy2960 272 --LRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKE 348 (405)
Q Consensus 272 --~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~ 348 (405)
+-+ +.+.|+ .++|-|.+- ....+..++++++++|++|.+|.+.. +..++...+..+.+++.|+..++
T Consensus 237 ~d~~~~~~~~~d-g~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~-~~~~~~~~lil~~~~I~GS~vG~------- 306 (360)
T KOG0023|consen 237 PDIMKAIMKTTD-GGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK-PLKLDTFPLILGRKSIKGSIVGS------- 306 (360)
T ss_pred HHHHHHHHHhhc-Ccceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC-cccccchhhhcccEEEEeecccc-------
Confidence 333 555543 245555544 34455678999999999999996554 77788888889999999999887
Q ss_pred HHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEec
Q psy2960 349 SAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 404 (405)
Q Consensus 349 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~~ 404 (405)
+...++++++.++|.+++ +.+..+++++++||+.|+ +++..++.||++.
T Consensus 307 ----~ket~E~Ldf~a~~~ik~-~IE~v~~~~v~~a~erm~--kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 307 ----RKETQEALDFVARGLIKS-PIELVKLSEVNEAYERME--KGDVRYRFVVDVS 355 (360)
T ss_pred ----HHHHHHHHHHHHcCCCcC-ceEEEehhHHHHHHHHHH--hcCeeEEEEEEcc
Confidence 455788999999999997 567899999999999999 9999999999874
No 8
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=2.8e-50 Score=363.36 Aligned_cols=310 Identities=25% Similarity=0.297 Sum_probs=272.0
Q ss_pred cceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCC
Q psy2960 71 YLANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVS 150 (405)
Q Consensus 71 ~~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~ 150 (405)
+++|++++.++++| ++++++.+++|++||||||+.|+|+|++|.+..+|..|. .+|.+||||++|+|++||++|+
T Consensus 1 mk~~aAV~~~~~~P---l~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~--~~P~vLGHEgAGiVe~VG~gVt 75 (366)
T COG1062 1 MKTRAAVAREAGKP---LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPE--GFPAVLGHEGAGIVEAVGEGVT 75 (366)
T ss_pred CCceEeeeecCCCC---eEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCC--CCceecccccccEEEEecCCcc
Confidence 46899999999998 999999999999999999999999999999999999887 4999999999999999999999
Q ss_pred CCCCCCEEEecC-----------------------------------------------CCCCcccceEeecccceEEcC
Q psy2960 151 SLAVGDHVIPDT-----------------------------------------------QHLGTWRNYGKFNHDVLMKVP 183 (405)
Q Consensus 151 ~~~~GdrV~~~~-----------------------------------------------~~~G~~a~~~~v~~~~~~~iP 183 (405)
+++|||+|+..+ ...++|+||.++++..+++++
T Consensus 76 ~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~ 155 (366)
T COG1062 76 SVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKID 155 (366)
T ss_pred ccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECC
Confidence 999999999653 012599999999999999999
Q ss_pred CCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCC
Q psy2960 184 KDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA 263 (405)
Q Consensus 184 ~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~ 263 (405)
++.+++.++.+.|...|.+.+..+.+++++|++|.|.|. |++|++++|-|+..||..++.+ +..+.++++++++|+
T Consensus 156 ~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAv---D~~~~Kl~~A~~fGA 231 (366)
T COG1062 156 PDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAV---DINPEKLELAKKFGA 231 (366)
T ss_pred CCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEE---eCCHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999 9999999999999999888888 445678999999999
Q ss_pred cEEeChhh---HHH-HhhhcCCCCCcEEEECCCchhH-HHHHHhcccCCEEEEEeccC-CCCcccCcccccccCeEEEEE
Q psy2960 264 DYVFTEEE---LRN-ISRDASIPKPKLALNCVGGNSA-TNLLRTLVSKGVMVTYGGMS-REPVQIPTSAFIFKDITLRGH 337 (405)
Q Consensus 264 ~~v~~~~d---~~~-i~~~t~g~g~Dvvld~~g~~~~-~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~k~~~~~g~ 337 (405)
++++|+.+ ..+ +.++|++ |+|++|||+|+... .+++.++.++|+.+.+|-.. ....+++..++... .++.|+
T Consensus 232 T~~vn~~~~~~vv~~i~~~T~g-G~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs 309 (366)
T COG1062 232 THFVNPKEVDDVVEAIVELTDG-GADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGS 309 (366)
T ss_pred ceeecchhhhhHHHHHHHhcCC-CCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEE
Confidence 99999864 445 8888866 99999999998655 56899999999999999653 33345666666655 999999
Q ss_pred ecchhhhhhccHHHHHHHHHHHHHHHHcCcccC--CcceeeehhhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 338 WMTRWQKENKESAERKSMMNELTEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
+++.-.. +.++.+++++..+|++.. .+++.++|+|++|||+.|. +|+.+ |-||.
T Consensus 310 ~~G~~~p--------~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~--~G~~I-R~Vi~ 365 (366)
T COG1062 310 AFGGARP--------RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMH--EGKSI-RSVIR 365 (366)
T ss_pred eecCCcc--------ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHh--CCcee-eEEec
Confidence 9876322 456899999999999875 4889999999999999999 78766 44443
No 9
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.8e-48 Score=378.24 Aligned_cols=311 Identities=21% Similarity=0.296 Sum_probs=264.4
Q ss_pred eeEEEEccCCCC-----ccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcC
Q psy2960 73 ANKLVYNQHGTP-----LRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGS 147 (405)
Q Consensus 73 ~~a~~~~~~g~~-----~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~ 147 (405)
|||+++.++|.+ .+.+++++.|.|+|+++||+|||.++|||++|++.+.|.++. .+|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~GhE~~G~V~~vG~ 78 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR--PLPMALGHEAAGVVVEVGE 78 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC--CCCccCCccceeEEEEeCC
Confidence 899999998864 256899999999999999999999999999999999987653 5689999999999999999
Q ss_pred CCCCCCCCCEEEecCC-----------------------------------------------CCCcccceEeecccceE
Q psy2960 148 DVSSLAVGDHVIPDTQ-----------------------------------------------HLGTWRNYGKFNHDVLM 180 (405)
Q Consensus 148 ~v~~~~~GdrV~~~~~-----------------------------------------------~~G~~a~~~~v~~~~~~ 180 (405)
+++++++||||++.+. ..|+|+||+.++++.++
T Consensus 79 ~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 79 GVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceE
Confidence 9999999999986321 02689999999999999
Q ss_pred EcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHH
Q psy2960 181 KVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLK 259 (405)
Q Consensus 181 ~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~~~ 259 (405)
++|+++++++|++++++++|||+++...+++++|++|||+|+ |++|++++|+|+.+|++ |+++.++ +++++.++
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~----~~r~~~a~ 233 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLN----EDKLALAR 233 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCC----HHHHHHHH
Confidence 999999999999999999999999887789999999999986 99999999999999995 6666533 45688899
Q ss_pred HcCCcEEeChhh--HHH-HhhhcCCCCCcEEEECCCch-hHHHHHHhcccCCEEEEEeccCC-CCcccCcccccccCeEE
Q psy2960 260 SLGADYVFTEEE--LRN-ISRDASIPKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSR-EPVQIPTSAFIFKDITL 334 (405)
Q Consensus 260 ~lg~~~v~~~~d--~~~-i~~~t~g~g~Dvvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~k~~~~ 334 (405)
++|+++++++.+ +.+ +++.+++ ++|+||||+|.. .+..++++++++|+++.+|.... ....++...++.+++++
T Consensus 234 ~~Ga~~~i~~~~~~~~~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i 312 (371)
T cd08281 234 ELGATATVNAGDPNAVEQVRELTGG-GVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTL 312 (371)
T ss_pred HcCCceEeCCCchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEE
Confidence 999999998653 445 7777766 899999999974 55678999999999999996543 23455666778899999
Q ss_pred EEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccC--CcceeeehhhHHHHHHHHhhhcCCCCceEEE
Q psy2960 335 RGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 401 (405)
Q Consensus 335 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl 401 (405)
.|++...+. ..+.+.++++++++|++++ .++++|+|+|+++||+.+. +++..+|+|+
T Consensus 313 ~g~~~~~~~--------~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~--~~~~~~~vi~ 371 (371)
T cd08281 313 KGSYMGSCV--------PRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLA--AGEAVRQVIL 371 (371)
T ss_pred EEEecCCCC--------hHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHh--CCCceeeeeC
Confidence 998876432 1345778889999999975 4789999999999999999 8888888764
No 10
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=6.5e-48 Score=372.71 Aligned_cols=310 Identities=17% Similarity=0.215 Sum_probs=263.3
Q ss_pred ceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCC
Q psy2960 72 LANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSS 151 (405)
Q Consensus 72 ~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~ 151 (405)
|||++++++++.+ +++++.|.|+|+++||+|||.++|||++|++.+.|.++. .+|.++|||++|+|+++|+++++
T Consensus 1 ~mka~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~G~e~~G~V~~vG~~v~~ 75 (358)
T TIGR03451 1 TVRGVIARSKGAP---VELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND--EFPFLLGHEAAGVVEAVGEGVTD 75 (358)
T ss_pred CcEEEEEccCCCC---CEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccc--cCCcccccceEEEEEEeCCCCcc
Confidence 6999999999876 788999999999999999999999999999999887543 56899999999999999999999
Q ss_pred CCCCCEEEecC---------------------------------------CCCCcccceEeecccceEEcCCCCChhhhc
Q psy2960 152 LAVGDHVIPDT---------------------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEIS 192 (405)
Q Consensus 152 ~~~GdrV~~~~---------------------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa 192 (405)
|++||||++.+ ...|+|+||+.+++..++++|+++++++|+
T Consensus 76 ~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa 155 (358)
T TIGR03451 76 VAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAG 155 (358)
T ss_pred cCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhh
Confidence 99999998621 024899999999999999999999999999
Q ss_pred cCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHHcCCcEEeChhh
Q psy2960 193 GITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEEE 271 (405)
Q Consensus 193 ~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d 271 (405)
.+++++.|||+++...+++++|++|||+|+ |++|++++|+|+.+|++ ++++.++ +++++.++++|+++++++++
T Consensus 156 ~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~----~~~~~~~~~~Ga~~~i~~~~ 230 (358)
T TIGR03451 156 LLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDID----DRKLEWAREFGATHTVNSSG 230 (358)
T ss_pred hhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC----HHHHHHHHHcCCceEEcCCC
Confidence 999999999999887789999999999986 99999999999999997 6665433 44688889999999998653
Q ss_pred --HHH-HhhhcCCCCCcEEEECCCch-hHHHHHHhcccCCEEEEEeccCCC-CcccCcccccccCeEEEEEecchhhhhh
Q psy2960 272 --LRN-ISRDASIPKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSRE-PVQIPTSAFIFKDITLRGHWMTRWQKEN 346 (405)
Q Consensus 272 --~~~-i~~~t~g~g~Dvvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~k~~~~~g~~~~~~~~~~ 346 (405)
+.+ +.+.+++.++|+||||+|++ ....++++++++|+++.+|..... ...++...++.+++++.+++.....
T Consensus 231 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--- 307 (358)
T TIGR03451 231 TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCL--- 307 (358)
T ss_pred cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCC---
Confidence 445 88888888999999999974 566789999999999999965332 2345555677899999988653211
Q ss_pred ccHHHHHHHHHHHHHHHHcCcccC--CcceeeehhhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 347 KESAERKSMMNELTEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
..+.++++++++++|++++ .++++|+++|+++||+.+. +++.. |++|.
T Consensus 308 -----~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~--~~~~~-k~~~~ 357 (358)
T TIGR03451 308 -----PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMH--AGDVL-RSVVE 357 (358)
T ss_pred -----cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHh--CCCcc-eeEEe
Confidence 1345788999999999976 4789999999999999998 77665 77775
No 11
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1e-47 Score=374.08 Aligned_cols=314 Identities=20% Similarity=0.280 Sum_probs=262.1
Q ss_pred cccceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCC
Q psy2960 69 FSYLANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSD 148 (405)
Q Consensus 69 ~~~~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~ 148 (405)
-|.+||++++.+++++ +.+++.|.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|++
T Consensus 7 ~~~~mka~~~~~~~~~---~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~ 83 (381)
T PLN02740 7 KVITCKAAVAWGPGEP---LVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEG 83 (381)
T ss_pred cceeeEEEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCC
Confidence 3678999999998865 7788999999999999999999999999999999876543467999999999999999999
Q ss_pred CCCCCCCCEEEecCC--------------------------------------------------CCCcccceEeecccc
Q psy2960 149 VSSLAVGDHVIPDTQ--------------------------------------------------HLGTWRNYGKFNHDV 178 (405)
Q Consensus 149 v~~~~~GdrV~~~~~--------------------------------------------------~~G~~a~~~~v~~~~ 178 (405)
+++|++||||++.+. ..|+|+||+.++.+.
T Consensus 84 v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~ 163 (381)
T PLN02740 84 VEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSAC 163 (381)
T ss_pred CCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHH
Confidence 999999999987521 148999999999999
Q ss_pred eEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHH
Q psy2960 179 LMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSY 257 (405)
Q Consensus 179 ~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~ 257 (405)
++++|+++++++++.+++++.|||+++...+++++|++|||+|+ |++|++++|+|+.+|++ |+++.++ +++++.
T Consensus 164 ~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~----~~r~~~ 238 (381)
T PLN02740 164 VVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDIN----PEKFEK 238 (381)
T ss_pred eEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCC----hHHHHH
Confidence 99999999999999999999999999877789999999999997 99999999999999995 7666543 346888
Q ss_pred HHHcCCcEEeChhh----HHH-HhhhcCCCCCcEEEECCCch-hHHHHHHhcccC-CEEEEEeccCCC-CcccCcccccc
Q psy2960 258 LKSLGADYVFTEEE----LRN-ISRDASIPKPKLALNCVGGN-SATNLLRTLVSK-GVMVTYGGMSRE-PVQIPTSAFIF 329 (405)
Q Consensus 258 ~~~lg~~~v~~~~d----~~~-i~~~t~g~g~Dvvld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~ 329 (405)
++++|+++++++++ +.+ +++.+++ ++|+||||+|+. .+..++++++++ |+++.+|..... ...++...+ .
T Consensus 239 a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~-~ 316 (381)
T PLN02740 239 GKEMGITDFINPKDSDKPVHERIREMTGG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMEL-F 316 (381)
T ss_pred HHHcCCcEEEecccccchHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHH-h
Confidence 99999999998643 455 7777766 899999999974 567789999996 999999965432 122332223 3
Q ss_pred cCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccC--CcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 330 KDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 330 k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
+++++.|++...+.. ...+.++++++.+|.+++ .++++|+|+|+++||+.+. +++. .|++|++
T Consensus 317 ~~~~i~g~~~~~~~~--------~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~--~~~~-~k~~~~~ 381 (381)
T PLN02740 317 DGRSITGSVFGDFKG--------KSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLE--DGKA-LRCLLHL 381 (381)
T ss_pred cCCeEEEEecCCCCc--------HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHH--CCCc-eeEEEeC
Confidence 788999987654321 234788999999999875 4789999999999999998 6665 5999874
No 12
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=1.8e-47 Score=369.27 Aligned_cols=311 Identities=18% Similarity=0.295 Sum_probs=261.3
Q ss_pred CcccceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcC
Q psy2960 68 GFSYLANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGS 147 (405)
Q Consensus 68 ~~~~~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~ 147 (405)
..|++++++.+.+..+. +++.++|.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+
T Consensus 8 ~~~~~~~~~~~~~~~~~---l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~ 83 (360)
T PLN02586 8 EHPQKAFGWAARDPSGV---LSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGF-TRYPIVPGHEIVGIVTKLGK 83 (360)
T ss_pred hchhheeEEEecCCCCC---ceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCC-CCCCccCCcceeEEEEEECC
Confidence 46788888888776554 778899999999999999999999999999999887653 35789999999999999999
Q ss_pred CCCCCCCCCEEEecCC----------------------------------CCCcccceEeecccceEEcCCCCChhhhcc
Q psy2960 148 DVSSLAVGDHVIPDTQ----------------------------------HLGTWRNYGKFNHDVLMKVPKDIALTEISG 193 (405)
Q Consensus 148 ~v~~~~~GdrV~~~~~----------------------------------~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~ 193 (405)
+|++|++||||+..+. .+|+|+||++++++.++++|+++++++|++
T Consensus 84 ~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~ 163 (360)
T PLN02586 84 NVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAP 163 (360)
T ss_pred CCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhh
Confidence 9999999999974210 158999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHH
Q psy2960 194 ITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELR 273 (405)
Q Consensus 194 ~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~ 273 (405)
+++++.|+|+++.....+++|++|||.|+ |++|++++|+|+.+|+++++++.+.++ +.+.++++|+++++++++..
T Consensus 164 l~~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~---~~~~~~~~Ga~~vi~~~~~~ 239 (360)
T PLN02586 164 LLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNK---EDEAINRLGADSFLVSTDPE 239 (360)
T ss_pred hhcchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcch---hhhHHHhCCCcEEEcCCCHH
Confidence 99999999999977667889999999887 999999999999999998887755432 34566789999999876533
Q ss_pred HHhhhcCCCCCcEEEECCCch-hHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHH
Q psy2960 274 NISRDASIPKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAER 352 (405)
Q Consensus 274 ~i~~~t~g~g~Dvvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~ 352 (405)
.+.+.++ ++|+|||++|.. .+..++++++++|+++.+|... .+..++...++.++..+.+++.+.
T Consensus 240 ~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~-~~~~~~~~~~~~~~~~i~g~~~~~----------- 305 (360)
T PLN02586 240 KMKAAIG--TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPE-KPLELPIFPLVLGRKLVGGSDIGG----------- 305 (360)
T ss_pred HHHhhcC--CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCC-CCCccCHHHHHhCCeEEEEcCcCC-----------
Confidence 3555553 699999999975 4567899999999999998543 234556666677888888877543
Q ss_pred HHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 353 KSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 353 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
.+.++++++++++|++++.+ ++|+|+|+++||+.+. +++..||+||++
T Consensus 306 ~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~--~~~~~gkvvi~~ 353 (360)
T PLN02586 306 IKETQEMLDFCAKHNITADI-ELIRMDEINTAMERLA--KSDVRYRFVIDV 353 (360)
T ss_pred HHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHH--cCCCcEEEEEEc
Confidence 23478899999999999765 6899999999999999 888889999986
No 13
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=1.7e-47 Score=365.09 Aligned_cols=316 Identities=24% Similarity=0.419 Sum_probs=266.8
Q ss_pred eeEEEEccCCCCc--cceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCC
Q psy2960 73 ANKLVYNQHGTPL--RVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVS 150 (405)
Q Consensus 73 ~~a~~~~~~g~~~--~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~ 150 (405)
||++++++++.|. +.+++.+.|.|+|+++||+||+.++|+|++|++.+.|.++....+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 7899999988642 34788899999999999999999999999999999987654446789999999999999999999
Q ss_pred C-CCCCCEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEe-CCCcHHHH
Q psy2960 151 S-LAVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQN-GANSACGQ 228 (405)
Q Consensus 151 ~-~~~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~-ga~G~vG~ 228 (405)
+ |++||+|++....+|+|+||+.++++.++++|+++++++|+++++.++|||..+ ..+.. ++++++|+ +++|++|+
T Consensus 81 ~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~ 158 (324)
T cd08291 81 AQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVHTAAASALGR 158 (324)
T ss_pred ccCCCCCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHH
Confidence 6 999999998743249999999999999999999999999999999999997554 44555 66777776 78899999
Q ss_pred HHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChh--hHHH-HhhhcCCCCCcEEEECCCchhHHHHHHhccc
Q psy2960 229 NVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVS 305 (405)
Q Consensus 229 ~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~--d~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~ 305 (405)
+++|+|+.+|+++++++++. ++++.++++|++++++++ ++.+ +++.+.++++|++|||+|+......++++++
T Consensus 159 ~a~q~a~~~G~~vi~~~~~~----~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~~~l~~ 234 (324)
T cd08291 159 MLVRLCKADGIKVINIVRRK----EQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQILLAMPY 234 (324)
T ss_pred HHHHHHHHcCCEEEEEeCCH----HHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHhhCC
Confidence 99999999999998887553 457888899999999865 4555 8888888899999999999888888999999
Q ss_pred CCEEEEEeccCCCCc-ccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHH
Q psy2960 306 KGVMVTYGGMSREPV-QIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEA 384 (405)
Q Consensus 306 ~G~~v~~g~~~~~~~-~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A 384 (405)
+|+++.+|....... .++...++.+++++.+++...+.... ..+.++++.++++ |.+++.++++|+++|+.+|
T Consensus 235 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a 308 (324)
T cd08291 235 GSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKL-----GPEVVKKLKKLVK-TELKTTFASRYPLALTLEA 308 (324)
T ss_pred CCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhccc-----CHHHHHHHHHHHh-CccccceeeEEcHHHHHHH
Confidence 999999996544332 24455667899999999876653211 2456788888888 9999989999999999999
Q ss_pred HHHHhhhcCCCCceEEEE
Q psy2960 385 LMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 385 ~~~~~~~~~~~~gKvvl~ 402 (405)
|+.+. +++..||++|.
T Consensus 309 ~~~~~--~~~~~Gkvv~~ 324 (324)
T cd08291 309 IAFYS--KNMSTGKKLLI 324 (324)
T ss_pred HHHHH--hCCCCCeEEeC
Confidence 99999 88899999873
No 14
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=2.3e-47 Score=366.43 Aligned_cols=305 Identities=24% Similarity=0.294 Sum_probs=258.2
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
|||+++++++. +++++.|.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|++|+++
T Consensus 1 mka~~~~~~~~----l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~ 76 (339)
T cd08239 1 MRGAVFPGDRT----VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHF 76 (339)
T ss_pred CeEEEEecCCc----eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccC
Confidence 79999987654 89999999999999999999999999999999877643222358999999999999999999999
Q ss_pred CCCCEEEecCC---------------------------CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHH
Q psy2960 153 AVGDHVIPDTQ---------------------------HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRML 205 (405)
Q Consensus 153 ~~GdrV~~~~~---------------------------~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al 205 (405)
++||||+..+. ..|+|+||+.++.+.++++|+++++++|+++++++.|||+++
T Consensus 77 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l 156 (339)
T cd08239 77 RVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL 156 (339)
T ss_pred CCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence 99999987531 258999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHHcCCcEEeChhhH-HH-HhhhcCCC
Q psy2960 206 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEEEL-RN-ISRDASIP 282 (405)
Q Consensus 206 ~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~-~~-i~~~t~g~ 282 (405)
.. .++++|++|||+|+ |++|++++|+|+.+|++ ++++.++ +++++.++++|+++++++++. .+ +.+.+++.
T Consensus 157 ~~-~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~----~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~ 230 (339)
T cd08239 157 RR-VGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPS----PERLELAKALGADFVINSGQDDVQEIRELTSGA 230 (339)
T ss_pred Hh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC----HHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCC
Confidence 65 78999999999987 99999999999999999 7776543 345788899999999986532 33 77777778
Q ss_pred CCcEEEECCCchhH-HHHHHhcccCCEEEEEeccCCCCcccCc-ccccccCeEEEEEecchhhhhhccHHHHHHHHHHHH
Q psy2960 283 KPKLALNCVGGNSA-TNLLRTLVSKGVMVTYGGMSREPVQIPT-SAFIFKDITLRGHWMTRWQKENKESAERKSMMNELT 360 (405)
Q Consensus 283 g~Dvvld~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 360 (405)
++|+||||+|+... ..++++++++|+++.+|..... .++. ..++.+++++.|++..+ .+.+++++
T Consensus 231 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~-----------~~~~~~~~ 297 (339)
T cd08239 231 GADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL--TIEVSNDLIRKQRTLIGSWYFS-----------VPDMEECA 297 (339)
T ss_pred CCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc--ccCcHHHHHhCCCEEEEEecCC-----------HHHHHHHH
Confidence 99999999998766 5789999999999999964332 2332 34667999999987643 23578889
Q ss_pred HHHHcCcccC--CcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 361 EMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 361 ~~~~~g~l~~--~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
+++++|.+++ .++++|+++++++||+.+. +++ .||+||++
T Consensus 298 ~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~--~~~-~gKvvi~~ 339 (339)
T cd08239 298 EFLARHKLEVDRLVTHRFGLDQAPEAYALFA--QGE-SGKVVFVF 339 (339)
T ss_pred HHHHcCCCChhHeEEEEecHHHHHHHHHHHH--cCC-ceEEEEeC
Confidence 9999999875 4788999999999999988 665 79999975
No 15
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=9.6e-47 Score=366.40 Aligned_cols=310 Identities=19% Similarity=0.273 Sum_probs=260.2
Q ss_pred cceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCC
Q psy2960 71 YLANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVS 150 (405)
Q Consensus 71 ~~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~ 150 (405)
..||++++.++++. +++++.|.|+|+++||+|||.++|||++|++.+.|.. .+|.++|||++|+|+++|++|+
T Consensus 11 ~~mka~~~~~~~~~---~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~----~~p~i~GhE~~G~V~~vG~~v~ 83 (378)
T PLN02827 11 ITCRAAVAWGAGEA---LVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA----LFPRIFGHEASGIVESIGEGVT 83 (378)
T ss_pred ceeEEEEEecCCCC---ceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC----CCCeeecccceEEEEEcCCCCc
Confidence 45999999987654 8889999999999999999999999999999987742 3578999999999999999999
Q ss_pred CCCCCCEEEecCC-----------------------------------------------CCCcccceEeecccceEEcC
Q psy2960 151 SLAVGDHVIPDTQ-----------------------------------------------HLGTWRNYGKFNHDVLMKVP 183 (405)
Q Consensus 151 ~~~~GdrV~~~~~-----------------------------------------------~~G~~a~~~~v~~~~~~~iP 183 (405)
+|++||||++.+. ..|+|+||+.+++..++++|
T Consensus 84 ~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP 163 (378)
T PLN02827 84 EFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVD 163 (378)
T ss_pred ccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECC
Confidence 9999999997531 12799999999999999999
Q ss_pred CCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCC
Q psy2960 184 KDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA 263 (405)
Q Consensus 184 ~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~ 263 (405)
+++++++++.+++++.|+|+++...+++++|++|||+|+ |++|++++|+|+++|++++++++. .+++++.++++|+
T Consensus 164 ~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~---~~~~~~~a~~lGa 239 (378)
T PLN02827 164 PLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDI---NPEKAEKAKTFGV 239 (378)
T ss_pred CCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECC---CHHHHHHHHHcCC
Confidence 999999999999999999998877788999999999987 999999999999999975554432 2446788899999
Q ss_pred cEEeChh----hHHH-HhhhcCCCCCcEEEECCCch-hHHHHHHhcccC-CEEEEEeccCCCCcccCc-ccccccCeEEE
Q psy2960 264 DYVFTEE----ELRN-ISRDASIPKPKLALNCVGGN-SATNLLRTLVSK-GVMVTYGGMSREPVQIPT-SAFIFKDITLR 335 (405)
Q Consensus 264 ~~v~~~~----d~~~-i~~~t~g~g~Dvvld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~k~~~~~ 335 (405)
+++++++ ++.+ +++.+++ ++|+||||+|.. .+..++++++++ |+++.+|..... ..++. ..++.+++++.
T Consensus 240 ~~~i~~~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~ 317 (378)
T PLN02827 240 TDFINPNDLSEPIQQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK-PEVSAHYGLFLSGRTLK 317 (378)
T ss_pred cEEEcccccchHHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC-ccccccHHHHhcCceEE
Confidence 9999864 3445 7777765 899999999986 567789999998 999999965332 23332 34667999999
Q ss_pred EEecchhhhhhccHHHHHHHHHHHHHHHHcCcccC--CcceeeehhhHHHHHHHHhhhcCCCCceEEEEec
Q psy2960 336 GHWMTRWQKENKESAERKSMMNELTEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 404 (405)
Q Consensus 336 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~~ 404 (405)
|++...+. ....++++++++++|++++ .++++|+|+++++||+.+. +++. +|+||+++
T Consensus 318 g~~~~~~~--------~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~--~~~~-~k~vi~~~ 377 (378)
T PLN02827 318 GSLFGGWK--------PKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMR--EGKC-LRCVIHMP 377 (378)
T ss_pred eeecCCCc--------hhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHH--CCCc-eEEEEEec
Confidence 98865431 1234778899999999998 6889999999999999998 7765 79999886
No 16
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=3.1e-46 Score=361.90 Aligned_cols=308 Identities=19% Similarity=0.332 Sum_probs=255.1
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
.|+..+...+.+ ..+...+++.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|
T Consensus 5 ~~a~~~~~~~~~-~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~-~~~p~i~GhE~aG~Vv~vG~~v~~~ 82 (375)
T PLN02178 5 NKAFGWAANDES-GVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF-SRYPIIPGHEIVGIATKVGKNVTKF 82 (375)
T ss_pred ceeEEEEEccCC-CCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC-CCCCcccCceeeEEEEEECCCCCcc
Confidence 344444444433 23778889999999999999999999999999999987643 2568999999999999999999999
Q ss_pred CCCCEEEecC----------------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCCcH
Q psy2960 153 AVGDHVIPDT----------------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNP 198 (405)
Q Consensus 153 ~~GdrV~~~~----------------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~ 198 (405)
++||||+..+ ...|+|+||+.++++.++++|+++++++|+++++++
T Consensus 83 ~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~ 162 (375)
T PLN02178 83 KEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAG 162 (375)
T ss_pred CCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccc
Confidence 9999997421 015899999999999999999999999999999999
Q ss_pred HHHHHHHHhhcC-CCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhh
Q psy2960 199 CTAYRMLKDYNS-LSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISR 277 (405)
Q Consensus 199 ~ta~~al~~~~~-~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~ 277 (405)
.|+|+++..... .++|++|+|.|+ |++|++++|+|+++|++++++.++.+ ++.+.++++|+++++++++...+.+
T Consensus 163 ~ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~---~~~~~a~~lGa~~~i~~~~~~~v~~ 238 (375)
T PLN02178 163 ITVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSE---KEREAIDRLGADSFLVTTDSQKMKE 238 (375)
T ss_pred hHHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChH---HhHHHHHhCCCcEEEcCcCHHHHHH
Confidence 999999876433 368999999987 99999999999999999888875532 3467788999999998765323655
Q ss_pred hcCCCCCcEEEECCCch-hHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHH
Q psy2960 278 DASIPKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMM 356 (405)
Q Consensus 278 ~t~g~g~Dvvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~ 356 (405)
.++ ++|+||||+|.. .+..++++++++|+++.+|... .+..++...++.+++++.|++... .+.+
T Consensus 239 ~~~--~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~-~~~~~~~~~~~~~~~~i~g~~~~~-----------~~~~ 304 (375)
T PLN02178 239 AVG--TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPE-KPLDLPIFPLVLGRKMVGGSQIGG-----------MKET 304 (375)
T ss_pred hhC--CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCC-CCCccCHHHHHhCCeEEEEeCccC-----------HHHH
Confidence 553 699999999987 5577899999999999998643 334566667778999999987643 2347
Q ss_pred HHHHHHHHcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 357 NELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 357 ~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
.++++++++|++++.+ ++|||+|+++||+.+. +++..||+|+++
T Consensus 305 ~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~--~~~~~gkvvi~~ 348 (375)
T PLN02178 305 QEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLA--KSDVRYRFVIDV 348 (375)
T ss_pred HHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHH--cCCCceEEEEEe
Confidence 8889999999999876 6799999999999999 888889999986
No 17
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=8.9e-46 Score=352.95 Aligned_cols=321 Identities=32% Similarity=0.487 Sum_probs=274.4
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++++++.+.+.+++.+.|.|.+.++||+|||.++++|++|++.+.|.++..+..|.++|||++|+|+++|++++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 78999998876545588999999999999999999999999999999988765434568899999999999999999999
Q ss_pred CCCCEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHH
Q psy2960 153 AVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQ 232 (405)
Q Consensus 153 ~~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiq 232 (405)
++||+|++.. ..|+|++|+.++...++++|++++++++++++++++|||+++.. +++++|++|||+|++|++|++++|
T Consensus 81 ~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~-~~~~~g~~vlI~g~~g~ig~~~~~ 158 (324)
T cd08292 81 QVGQRVAVAP-VHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDF-LGVKPGQWLIQNAAGGAVGKLVAM 158 (324)
T ss_pred CCCCEEEecc-CCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHh-hCCCCCCEEEEcccccHHHHHHHH
Confidence 9999999883 35999999999999999999999999999999999999999855 899999999999999999999999
Q ss_pred HHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEE
Q psy2960 233 IARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVM 309 (405)
Q Consensus 233 la~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~ 309 (405)
+|+++|+++++++++.++ .+.++++|+++++++++ +.. +.+.+.+.++|+||||+|+.....++++++++|++
T Consensus 159 ~a~~~G~~v~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~ 234 (324)
T cd08292 159 LAAARGINVINLVRRDAG----VAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGGTL 234 (324)
T ss_pred HHHHCCCeEEEEecCHHH----HHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEE
Confidence 999999999999866543 45566789999988753 555 88888889999999999998888889999999999
Q ss_pred EEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHHh
Q psy2960 310 VTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTM 389 (405)
Q Consensus 310 v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~ 389 (405)
+.+|........++....+.+++++.++....+..... |....+.++++++++.+|.+++.+.++|+++++.+||+.+.
T Consensus 235 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~ 313 (324)
T cd08292 235 VSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMS-VEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAASM 313 (324)
T ss_pred EEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcC-HHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHHH
Confidence 99986433333344444567999999998765443221 24456778999999999999976788999999999999998
Q ss_pred hhcCCCCceEEEE
Q psy2960 390 SIQGKSGVKYYID 402 (405)
Q Consensus 390 ~~~~~~~gKvvl~ 402 (405)
++...+|++++
T Consensus 314 --~~~~~~kvvv~ 324 (324)
T cd08292 314 --RPGRAGKVLLR 324 (324)
T ss_pred --cCCCCceEEeC
Confidence 77888999873
No 18
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=8.1e-46 Score=359.08 Aligned_cols=309 Identities=23% Similarity=0.305 Sum_probs=254.4
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++...+.+ +++++.|.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|++|
T Consensus 2 ~~a~~~~~~~~~---l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~v~~~ 77 (368)
T TIGR02818 2 SRAAVAWAAGQP---LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE-GVFPVILGHEGAGIVEAVGEGVTSV 77 (368)
T ss_pred ceEEEEecCCCC---eEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC-CCCCeeeccccEEEEEEECCCCccC
Confidence 889999888765 889999999999999999999999999999999987654 3578999999999999999999999
Q ss_pred CCCCEEEecCC-----------------------------------------------CCCcccceEeecccceEEcCCC
Q psy2960 153 AVGDHVIPDTQ-----------------------------------------------HLGTWRNYGKFNHDVLMKVPKD 185 (405)
Q Consensus 153 ~~GdrV~~~~~-----------------------------------------------~~G~~a~~~~v~~~~~~~iP~~ 185 (405)
++||||++.+. ..|+|+||+.++...++++|++
T Consensus 78 ~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~ 157 (368)
T TIGR02818 78 KVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPA 157 (368)
T ss_pred CCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCC
Confidence 99999987521 1269999999999999999999
Q ss_pred CChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHHcCCc
Q psy2960 186 IALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGAD 264 (405)
Q Consensus 186 ~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~-~v~~~~~~~~~~~~~~~~~~~lg~~ 264 (405)
+++++|+++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|+++.++ +++++.++++|++
T Consensus 158 l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~----~~~~~~a~~~Ga~ 232 (368)
T TIGR02818 158 APLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDIN----PAKFELAKKLGAT 232 (368)
T ss_pred CCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC----HHHHHHHHHhCCC
Confidence 9999999999999999999987789999999999986 9999999999999999 57766543 4568888999999
Q ss_pred EEeChhh----HHH-HhhhcCCCCCcEEEECCCch-hHHHHHHhcccC-CEEEEEeccCC-CCcccCcccccccCeEEEE
Q psy2960 265 YVFTEEE----LRN-ISRDASIPKPKLALNCVGGN-SATNLLRTLVSK-GVMVTYGGMSR-EPVQIPTSAFIFKDITLRG 336 (405)
Q Consensus 265 ~v~~~~d----~~~-i~~~t~g~g~Dvvld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~k~~~~~g 336 (405)
+++++++ +.+ +++.+++ ++|++|||+|+. ....++++++++ |+++.+|.... ....+....++ ++..+.+
T Consensus 233 ~~i~~~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g 310 (368)
T TIGR02818 233 DCVNPNDYDKPIQEVIVEITDG-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRVWRG 310 (368)
T ss_pred eEEcccccchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccceEEE
Confidence 9998652 445 7777775 899999999975 456789999886 99999996432 22233333333 3445677
Q ss_pred EecchhhhhhccHHHHHHHHHHHHHHHHcCcccC--CcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 337 HWMTRWQKENKESAERKSMMNELTEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
+...... ....+.++++++++|++++ .++++|+|+|+++||+.+. +++ ..|++|++
T Consensus 311 ~~~~~~~--------~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~--~~~-~~k~~v~~ 368 (368)
T TIGR02818 311 SAFGGVK--------GRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMH--EGK-SIRTVIHY 368 (368)
T ss_pred eeccCCC--------cHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHh--CCC-ceeEEeeC
Confidence 6543211 1235788999999999864 4789999999999999998 665 47999874
No 19
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=8.9e-46 Score=359.34 Aligned_cols=309 Identities=19% Similarity=0.272 Sum_probs=258.9
Q ss_pred cceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCC
Q psy2960 71 YLANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVS 150 (405)
Q Consensus 71 ~~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~ 150 (405)
++||++++.+++++ +++++.|.|+|+++||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|++|+
T Consensus 1 ~~~ka~~~~~~~~~---~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~ 76 (369)
T cd08301 1 ITCKAAVAWEAGKP---LVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQT-PLFPRILGHEAAGIVESVGEGVT 76 (369)
T ss_pred CccEEEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCC-CCCCcccccccceEEEEeCCCCC
Confidence 37999999988765 889999999999999999999999999999999987653 36789999999999999999999
Q ss_pred CCCCCCEEEecCC------------------------------------------------CCCcccceEeecccceEEc
Q psy2960 151 SLAVGDHVIPDTQ------------------------------------------------HLGTWRNYGKFNHDVLMKV 182 (405)
Q Consensus 151 ~~~~GdrV~~~~~------------------------------------------------~~G~~a~~~~v~~~~~~~i 182 (405)
+|++||||++.+. ..|+|+||+.++...++++
T Consensus 77 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i 156 (369)
T cd08301 77 DLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKI 156 (369)
T ss_pred ccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEEC
Confidence 9999999987521 1378999999999999999
Q ss_pred CCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHHc
Q psy2960 183 PKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSL 261 (405)
Q Consensus 183 P~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~-~v~~~~~~~~~~~~~~~~~~~l 261 (405)
|+++++++|+++++++.|||+++...+++++|++|||+|+ |++|++++|+|+.+|+ +++++.++ +++++.++++
T Consensus 157 P~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~----~~~~~~~~~~ 231 (369)
T cd08301 157 NPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLN----PSKFEQAKKF 231 (369)
T ss_pred CCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC----HHHHHHHHHc
Confidence 9999999999999999999999888789999999999986 9999999999999999 67777644 3457888999
Q ss_pred CCcEEeChhh----HHH-HhhhcCCCCCcEEEECCCch-hHHHHHHhcccC-CEEEEEeccCC-CCcccCcccccccCeE
Q psy2960 262 GADYVFTEEE----LRN-ISRDASIPKPKLALNCVGGN-SATNLLRTLVSK-GVMVTYGGMSR-EPVQIPTSAFIFKDIT 333 (405)
Q Consensus 262 g~~~v~~~~d----~~~-i~~~t~g~g~Dvvld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~k~~~ 333 (405)
|++.++++.+ +.+ +++.+++ ++|++|||+|+. ....++++++++ |+++.+|.... ...+++...+ .++++
T Consensus 232 Ga~~~i~~~~~~~~~~~~v~~~~~~-~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~ 309 (369)
T cd08301 232 GVTEFVNPKDHDKPVQEVIAEMTGG-GVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNL-LNGRT 309 (369)
T ss_pred CCceEEcccccchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHH-hcCCe
Confidence 9999988643 444 7777765 899999999975 456789999996 99999996543 2233433333 37899
Q ss_pred EEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccC--CcceeeehhhHHHHHHHHhhhcCCCCceEEE
Q psy2960 334 LRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 401 (405)
Q Consensus 334 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl 401 (405)
+.|++...+. ....++++++++.+|.+++ .++++|+++|+++||+.+. +++. .|++|
T Consensus 310 i~g~~~~~~~--------~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~--~~~~-~k~~~ 368 (369)
T cd08301 310 LKGTLFGGYK--------PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLL--KGEC-LRCIL 368 (369)
T ss_pred EEEEecCCCC--------hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHH--CCCc-eeEEe
Confidence 9998765432 1345788899999998765 4789999999999999999 7775 48887
No 20
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=7.4e-46 Score=353.87 Aligned_cols=298 Identities=18% Similarity=0.197 Sum_probs=250.1
Q ss_pred EEEccCCCCc-cceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCCCC
Q psy2960 76 LVYNQHGTPL-RVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSLAV 154 (405)
Q Consensus 76 ~~~~~~g~~~-~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~~ 154 (405)
+.+.++|.+. ..+++++.|.|+|+++||+|||.++|||++|++.+.|.++.. .+|.++|||++|+|+++|+++++|++
T Consensus 2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (329)
T TIGR02822 2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVH-RPRVTPGHEVVGEVAGRGADAGGFAV 80 (329)
T ss_pred eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCC-CCCccCCcceEEEEEEECCCCcccCC
Confidence 5666676553 458999999999999999999999999999999999976542 35789999999999999999999999
Q ss_pred CCEEEecC---------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHh
Q psy2960 155 GDHVIPDT---------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKD 207 (405)
Q Consensus 155 GdrV~~~~---------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~ 207 (405)
||||+..+ ..+|+|+||+.++...++++|+++++++++.+++++.|||+++..
T Consensus 81 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~ 160 (329)
T TIGR02822 81 GDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR 160 (329)
T ss_pred CCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh
Confidence 99997421 124899999999999999999999999999999999999999965
Q ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEE
Q psy2960 208 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLA 287 (405)
Q Consensus 208 ~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvv 287 (405)
+++++|++|||+|+ |++|++++|+|+.+|++++++++++ ++++.++++|+++++++.+.. ..++|++
T Consensus 161 -~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~----~~~~~a~~~Ga~~vi~~~~~~-------~~~~d~~ 227 (329)
T TIGR02822 161 -ASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGA----AARRLALALGAASAGGAYDTP-------PEPLDAA 227 (329)
T ss_pred -cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCCh----HHHHHHHHhCCceeccccccC-------cccceEE
Confidence 89999999999998 9999999999999999988887553 357899999999998754311 2468999
Q ss_pred EECCCc-hhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcC
Q psy2960 288 LNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTG 366 (405)
Q Consensus 288 ld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 366 (405)
+++.+. ..+..++++++++|+++.+|........++...++.+++++.+++... ...+.++++++++|
T Consensus 228 i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~-----------~~~~~~~~~l~~~g 296 (329)
T TIGR02822 228 ILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNT-----------RADAREFLELAAQH 296 (329)
T ss_pred EECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCC-----------HHHHHHHHHHHHhC
Confidence 988875 444678999999999999996433223455556677899999886432 23467788999999
Q ss_pred cccCCcceeeehhhHHHHHHHHhhhcCCCCceEEE
Q psy2960 367 KLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 401 (405)
Q Consensus 367 ~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl 401 (405)
++++ ++++|+|+|+++||+.+. +++..||+||
T Consensus 297 ~i~~-i~~~~~l~~~~~A~~~~~--~~~~~Gkvvl 328 (329)
T TIGR02822 297 GVRV-TTHTYPLSEADRALRDLK--AGRFDGAAVL 328 (329)
T ss_pred CCee-EEEEEeHHHHHHHHHHHH--cCCCceEEEe
Confidence 9985 578999999999999999 8999999987
No 21
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.1e-45 Score=358.44 Aligned_cols=309 Identities=23% Similarity=0.329 Sum_probs=255.0
Q ss_pred ceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCC
Q psy2960 72 LANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSS 151 (405)
Q Consensus 72 ~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~ 151 (405)
+||++++..++++ +++++.|.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++
T Consensus 2 ~~~a~~~~~~~~~---~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E~~G~V~~vG~~v~~ 77 (368)
T cd08300 2 TCKAAVAWEAGKP---LSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE-GLFPVILGHEGAGIVESVGEGVTS 77 (368)
T ss_pred cceEEEEecCCCC---cEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc-CCCCceeccceeEEEEEeCCCCcc
Confidence 6899998887765 889999999999999999999999999999999987654 367999999999999999999999
Q ss_pred CCCCCEEEecCC-----------------------------------------------CCCcccceEeecccceEEcCC
Q psy2960 152 LAVGDHVIPDTQ-----------------------------------------------HLGTWRNYGKFNHDVLMKVPK 184 (405)
Q Consensus 152 ~~~GdrV~~~~~-----------------------------------------------~~G~~a~~~~v~~~~~~~iP~ 184 (405)
|++||||++.+. ..|+|+||+.+++..++++|+
T Consensus 78 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~ 157 (368)
T cd08300 78 VKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINP 157 (368)
T ss_pred CCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCC
Confidence 999999986521 136899999999999999999
Q ss_pred CCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHHcCC
Q psy2960 185 DIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGA 263 (405)
Q Consensus 185 ~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~-~v~~~~~~~~~~~~~~~~~~~lg~ 263 (405)
++++++|+++++++.|||+++...+++++|++|||+|+ |++|++++|+|+.+|+ +++++.++ +++++.++++|+
T Consensus 158 ~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~----~~~~~~~~~lGa 232 (368)
T cd08300 158 EAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDIN----PDKFELAKKFGA 232 (368)
T ss_pred CCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC----HHHHHHHHHcCC
Confidence 99999999999999999999877789999999999986 9999999999999999 47766544 345788899999
Q ss_pred cEEeChhh----HHH-HhhhcCCCCCcEEEECCCch-hHHHHHHhcccC-CEEEEEeccCC-CCcccCcccccccCeEEE
Q psy2960 264 DYVFTEEE----LRN-ISRDASIPKPKLALNCVGGN-SATNLLRTLVSK-GVMVTYGGMSR-EPVQIPTSAFIFKDITLR 335 (405)
Q Consensus 264 ~~v~~~~d----~~~-i~~~t~g~g~Dvvld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~k~~~~~ 335 (405)
++++++++ +.+ +.+.+++ ++|+||||+|+. ....++++++++ |+++.+|.... .....+...+. ++.++.
T Consensus 233 ~~~i~~~~~~~~~~~~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~ 310 (368)
T cd08300 233 TDCVNPKDHDKPIQQVLVEMTDG-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWK 310 (368)
T ss_pred CEEEcccccchHHHHHHHHHhCC-CCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEE
Confidence 99998643 555 7777776 899999999974 567789999886 99999996532 22222222232 345666
Q ss_pred EEecchhhhhhccHHHHHHHHHHHHHHHHcCcccC--CcceeeehhhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 336 GHWMTRWQKENKESAERKSMMNELTEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 336 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
++....+. ..+.+.++++++++|++++ .++++|+|+|+++||+.+. +++. .|++|+
T Consensus 311 g~~~~~~~--------~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~--~~~~-~k~~~~ 368 (368)
T cd08300 311 GTAFGGWK--------SRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMH--AGKS-IRTVVK 368 (368)
T ss_pred EEEecccC--------cHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHh--CCCC-ceeeeC
Confidence 66554321 1345778899999999986 3789999999999999998 6664 699875
No 22
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=1.5e-45 Score=354.23 Aligned_cols=302 Identities=18% Similarity=0.241 Sum_probs=247.1
Q ss_pred cceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhc-ccCCC-CCCCCCCCccceEEEEEEEcCC
Q psy2960 71 YLANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQ-GVYPI-KPTLPAVPGFEGVGEVVEVGSD 148 (405)
Q Consensus 71 ~~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~~-~~~~p~~lG~E~~G~V~~vG~~ 148 (405)
-.+++++++++++ +++++.|.| ++++||||||.++|||++|++.+. |..+. ...+|.++|||++|+|+++ +
T Consensus 3 ~~~~~~~~~~~~~----~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~ 75 (343)
T PRK09880 3 VKTQSCVVAGKKD----VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--D 75 (343)
T ss_pred ccceEEEEecCCc----eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--c
Confidence 3578999998877 889999997 689999999999999999999875 44322 2357999999999999999 7
Q ss_pred CCCCCCCCEEEecC-------------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCCc
Q psy2960 149 VSSLAVGDHVIPDT-------------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSN 197 (405)
Q Consensus 149 v~~~~~GdrV~~~~-------------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~ 197 (405)
+++|++||||+..+ ..+|+|+||++++++.++++|+++++++++. ..+
T Consensus 76 v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~-~~~ 154 (343)
T PRK09880 76 SSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAF-AEP 154 (343)
T ss_pred CccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHh-hcH
Confidence 89999999998531 1259999999999999999999999987664 457
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH
Q psy2960 198 PCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN 274 (405)
Q Consensus 198 ~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~ 274 (405)
+.+||+++.. ....+|++|||+|+ |++|++++|+|+++|++ ++++.++ +++++.++++|+++++|+++ +.+
T Consensus 155 ~~~a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~----~~~~~~a~~lGa~~vi~~~~~~~~~ 228 (343)
T PRK09880 155 LAVAIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVS----PRSLSLAREMGADKLVNPQNDDLDH 228 (343)
T ss_pred HHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCC----HHHHHHHHHcCCcEEecCCcccHHH
Confidence 7899999976 56678999999997 99999999999999995 5555533 45688999999999998754 333
Q ss_pred HhhhcCCCCCcEEEECCCch-hHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHH
Q psy2960 275 ISRDASIPKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERK 353 (405)
Q Consensus 275 i~~~t~g~g~Dvvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~ 353 (405)
+.+. ..++|+||||+|++ ....++++++++|+++.+|... ....++...++.|++++.+++.. .
T Consensus 229 ~~~~--~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~~k~~~i~g~~~~------------~ 293 (343)
T PRK09880 229 YKAE--KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGG-APPEFPMMTLIVKEISLKGSFRF------------T 293 (343)
T ss_pred Hhcc--CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCC-CCCccCHHHHHhCCcEEEEEeec------------c
Confidence 2222 23699999999985 4567899999999999999532 23456666777899999998642 2
Q ss_pred HHHHHHHHHHHcCcccC--CcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 354 SMMNELTEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 354 ~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
+.++++++++++|++++ .++++|+++|+++||+.+. +++..||++|.+
T Consensus 294 ~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~--~~~~~gKvvl~~ 343 (343)
T PRK09880 294 EEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAG--DKTQAAKVQLVF 343 (343)
T ss_pred ccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHh--cCCCceEEEEeC
Confidence 34788999999999986 4779999999999999998 777889999874
No 23
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=3.4e-45 Score=353.33 Aligned_cols=309 Identities=21% Similarity=0.288 Sum_probs=260.6
Q ss_pred cceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCC
Q psy2960 71 YLANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVS 150 (405)
Q Consensus 71 ~~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~ 150 (405)
+.++++++++++++ ++++++|.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 8 ~~~~~~~~~~~~~~---~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~Vv~vG~~v~ 83 (357)
T PLN02514 8 KKTTGWAARDPSGH---LSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM-SNYPMVPGHEVVGEVVEVGSDVS 83 (357)
T ss_pred ceEEEEEEecCCCC---ceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc-CCCCccCCceeeEEEEEECCCcc
Confidence 34899999999876 889999999999999999999999999999999887643 25689999999999999999999
Q ss_pred CCCCCCEEEecC----------------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCC
Q psy2960 151 SLAVGDHVIPDT----------------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITS 196 (405)
Q Consensus 151 ~~~~GdrV~~~~----------------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~ 196 (405)
+|++||+|+..+ ...|+|+||+.++...++++|+++++++|+++++
T Consensus 84 ~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~ 163 (357)
T PLN02514 84 KFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLC 163 (357)
T ss_pred cccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhh
Confidence 999999997421 0248999999999999999999999999999999
Q ss_pred cHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHh
Q psy2960 197 NPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNIS 276 (405)
Q Consensus 197 ~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~ 276 (405)
++.|||+++......++|++|+|+|+ |++|++++|+|+++|+++++++++++ ++...++++|+++++++.+...+.
T Consensus 164 ~~~ta~~al~~~~~~~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~~~~~---~~~~~~~~~Ga~~~i~~~~~~~~~ 239 (357)
T PLN02514 164 AGVTVYSPLSHFGLKQSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSDK---KREEALEHLGADDYLVSSDAAEMQ 239 (357)
T ss_pred hHHHHHHHHHHcccCCCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEeCCHH---HHHHHHHhcCCcEEecCCChHHHH
Confidence 99999999987666789999999976 99999999999999999888875543 233455679999888765433355
Q ss_pred hhcCCCCCcEEEECCCch-hHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHH
Q psy2960 277 RDASIPKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSM 355 (405)
Q Consensus 277 ~~t~g~g~Dvvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~ 355 (405)
+.+ .++|++|||+|.. ....++++++++|+++.+|.... ...++...++.+++++.|++... ...
T Consensus 240 ~~~--~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~-----------~~~ 305 (357)
T PLN02514 240 EAA--DSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT-PLQFVTPMLMLGRKVITGSFIGS-----------MKE 305 (357)
T ss_pred Hhc--CCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC-CCcccHHHHhhCCcEEEEEecCC-----------HHH
Confidence 554 3699999999964 55678999999999999996532 34555666778999999987654 234
Q ss_pred HHHHHHHHHcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEec
Q psy2960 356 MNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 404 (405)
Q Consensus 356 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~~ 404 (405)
++++++++++|.+++.+ ++|+++|+.+||+.+. +++..||+||+++
T Consensus 306 ~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~--~~~~~gk~v~~~~ 351 (357)
T PLN02514 306 TEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLE--KNDVRYRFVVDVA 351 (357)
T ss_pred HHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHH--cCCCceeEEEEcc
Confidence 78889999999998765 6899999999999999 8888899999875
No 24
>KOG0022|consensus
Probab=100.00 E-value=7.2e-46 Score=329.20 Aligned_cols=313 Identities=21% Similarity=0.257 Sum_probs=272.0
Q ss_pred ccceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCC
Q psy2960 70 SYLANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDV 149 (405)
Q Consensus 70 ~~~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v 149 (405)
+.++||++..++++| |.++++..++|+.+||+||+.++++|++|.+.+.|..+. ..+|+++|||++|+|+.+|.+|
T Consensus 5 vI~CKAAV~w~a~~P---L~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~-~~fP~IlGHEaaGIVESvGegV 80 (375)
T KOG0022|consen 5 VITCKAAVAWEAGKP---LVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPE-GLFPVILGHEAAGIVESVGEGV 80 (375)
T ss_pred ceEEeEeeeccCCCC---eeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCcc-ccCceEecccceeEEEEecCCc
Confidence 568999999999999 999999999999999999999999999999999998654 4789999999999999999999
Q ss_pred CCCCCCCEEEecC------------------------------------------------CCCCcccceEeecccceEE
Q psy2960 150 SSLAVGDHVIPDT------------------------------------------------QHLGTWRNYGKFNHDVLMK 181 (405)
Q Consensus 150 ~~~~~GdrV~~~~------------------------------------------------~~~G~~a~~~~v~~~~~~~ 181 (405)
+++++||+|+... ....+|+||.+++...+.+
T Consensus 81 ~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~k 160 (375)
T KOG0022|consen 81 TTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAK 160 (375)
T ss_pred cccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEe
Confidence 9999999999763 0124899999999999999
Q ss_pred cCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHc
Q psy2960 182 VPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL 261 (405)
Q Consensus 182 iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~l 261 (405)
|++...++.++.+.|...|+|.|..+.++++||++|.|.|. |+||+++++-||+.||..|+.+ +-.+.+.+.++++
T Consensus 161 Id~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgv---DiN~~Kf~~ak~f 236 (375)
T KOG0022|consen 161 IDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGV---DINPDKFEKAKEF 236 (375)
T ss_pred cCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhcCcccEEEE---ecCHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999 9999999999999999777777 4445678999999
Q ss_pred CCcEEeChhh----HHH-HhhhcCCCCCcEEEECCCchhH-HHHHHhcccC-CEEEEEeccC-CCCcccCcccccccCeE
Q psy2960 262 GADYVFTEEE----LRN-ISRDASIPKPKLALNCVGGNSA-TNLLRTLVSK-GVMVTYGGMS-REPVQIPTSAFIFKDIT 333 (405)
Q Consensus 262 g~~~v~~~~d----~~~-i~~~t~g~g~Dvvld~~g~~~~-~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~k~~~ 333 (405)
|+.+.+|+.| ..+ +.++|+ .|+|+-+||+|+..+ .+++.+..++ |.-+.+|-.. +...++.++.++ .+.+
T Consensus 237 GaTe~iNp~d~~~~i~evi~EmTd-gGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~-~GR~ 314 (375)
T KOG0022|consen 237 GATEFINPKDLKKPIQEVIIEMTD-GGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLV-TGRT 314 (375)
T ss_pred CcceecChhhccccHHHHHHHHhc-CCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhc-cccE
Confidence 9999999876 345 888886 799999999999766 4678888888 9999999643 444566666666 5888
Q ss_pred EEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccC--CcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 334 LRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 334 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
+.|+.++.|.. +..+..+++...+++++. .+++.+||+++++||+.|. +|+.. +.||.+
T Consensus 315 ~~Gs~FGG~K~--------~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~--~Gksi-R~vl~~ 375 (375)
T KOG0022|consen 315 WKGSAFGGFKS--------KSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLH--EGKSI-RCVLWM 375 (375)
T ss_pred EEEEecccccc--------hhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHh--CCceE-EEEEeC
Confidence 89888877532 555778888888888764 4999999999999999999 88876 777653
No 25
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4.1e-45 Score=351.30 Aligned_cols=317 Identities=22% Similarity=0.265 Sum_probs=257.3
Q ss_pred ccceeEEEEccC--CCCc-cceEeeee---cCC-CCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCcc--ceEE
Q psy2960 70 SYLANKLVYNQH--GTPL-RVVTVENE---TLN-SVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGF--EGVG 140 (405)
Q Consensus 70 ~~~~~a~~~~~~--g~~~-~~l~~~~~---~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~--E~~G 140 (405)
+.++|.|++.+. |.|. +.+++++. +.| ++++|||||||.|+++|+.|.....+..+ ....|+++|+ |++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~-~~~~p~~~G~~~~~~G 84 (348)
T PLN03154 6 VVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD-SYLPPFVPGQRIEGFG 84 (348)
T ss_pred cccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC-CCCCCcCCCCeeEeeE
Confidence 455788888543 2222 45777774 666 35899999999999999999865443222 1235889998 8899
Q ss_pred EEEEEcCCCCCCCCCCEEEecCCCCCcccceEeecccc--eEE--cCCCCChh-hhccCCCcHHHHHHHHHhhcCCCCCC
Q psy2960 141 EVVEVGSDVSSLAVGDHVIPDTQHLGTWRNYGKFNHDV--LMK--VPKDIALT-EISGITSNPCTAYRMLKDYNSLSPGD 215 (405)
Q Consensus 141 ~V~~vG~~v~~~~~GdrV~~~~~~~G~~a~~~~v~~~~--~~~--iP~~~s~~-~Aa~~~~~~~ta~~al~~~~~~~~g~ 215 (405)
+|..+|+++++|++||||+++ |+|+||+.++... +++ +|++++++ +||+++++++|||+++...+++++|+
T Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~----~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~ 160 (348)
T PLN03154 85 VSKVVDSDDPNFKPGDLISGI----TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGD 160 (348)
T ss_pred EEEEEecCCCCCCCCCEEEec----CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCC
Confidence 999999999999999999876 7899999998853 544 59999997 78899999999999998888999999
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHH-HcCCcEEeChh---hHHH-HhhhcCCCCCcEEEEC
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK-SLGADYVFTEE---ELRN-ISRDASIPKPKLALNC 290 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~-~lg~~~v~~~~---d~~~-i~~~t~g~g~Dvvld~ 290 (405)
+|||+|++|++|++++|+|+++|++++++++++ ++++.++ ++|++++++++ ++.+ +++.++ .++|++|||
T Consensus 161 ~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~----~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~-~gvD~v~d~ 235 (348)
T PLN03154 161 SVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS----QKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFP-EGIDIYFDN 235 (348)
T ss_pred EEEEecCccHHHHHHHHHHHHcCCEEEEEcCCH----HHHHHHHHhcCCCEEEECCCcccHHHHHHHHCC-CCcEEEEEC
Confidence 999999999999999999999999998887554 3467776 79999999864 4555 777764 589999999
Q ss_pred CCchhHHHHHHhcccCCEEEEEeccCCCCcc-----cCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHc
Q psy2960 291 VGGNSATNLLRTLVSKGVMVTYGGMSREPVQ-----IPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRT 365 (405)
Q Consensus 291 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-----~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (405)
+|+.....++++++++|+++.+|........ .+...++.+++++.|++...+. ....+.++++++++++
T Consensus 236 vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~------~~~~~~~~~~~~l~~~ 309 (348)
T PLN03154 236 VGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYL------HLFPQFLENVSRYYKQ 309 (348)
T ss_pred CCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHH------HHHHHHHHHHHHHHHC
Confidence 9998888899999999999999965432211 2344567799999998865432 1234568889999999
Q ss_pred CcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEec
Q psy2960 366 GKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 404 (405)
Q Consensus 366 g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~~ 404 (405)
|++++.+..+|+|+++++||+.++ +++..||+||++.
T Consensus 310 G~l~~~~~~~~~L~~~~~A~~~l~--~g~~~GKvVl~~~ 346 (348)
T PLN03154 310 GKIVYIEDMSEGLESAPAALVGLF--SGKNVGKQVIRVA 346 (348)
T ss_pred CCccCceecccCHHHHHHHHHHHH--cCCCCceEEEEec
Confidence 999988778999999999999999 8999999999875
No 26
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=7.6e-45 Score=349.14 Aligned_cols=326 Identities=55% Similarity=0.878 Sum_probs=278.6
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCC-CeEEEEEEEeecChhhhhhhcccCCCCCC----CCCCCccceEEEEEEEcC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQK-HEVVVKMLVAPVNPADINTIQGVYPIKPT----LPAVPGFEGVGEVVEVGS 147 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~----~p~~lG~E~~G~V~~vG~ 147 (405)
||+|.+.+++.+.+.+.+++.|.|+|.+ +||+||+.++|+|++|++.+.|..+.... +|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 8999999998765568999999999888 99999999999999999999887653323 678999999999999999
Q ss_pred CCCCCCCCCEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHH
Q psy2960 148 DVSSLAVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACG 227 (405)
Q Consensus 148 ~v~~~~~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG 227 (405)
+++.|++||+|++.....|+|++|+.++.+.++++|+++++++++++++.++|||+++...+.+++|++|||+|++|++|
T Consensus 81 ~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg 160 (341)
T cd08290 81 GVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVG 160 (341)
T ss_pred CCCCCCCCCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHH
Confidence 99999999999988544699999999999999999999999999999999999999998878899999999999999999
Q ss_pred HHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChh-----hHHH-HhhhcCCCCCcEEEECCCchhHHHHHH
Q psy2960 228 QNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE-----ELRN-ISRDASIPKPKLALNCVGGNSATNLLR 301 (405)
Q Consensus 228 ~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~-----d~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~ 301 (405)
++++|+|+++|+++++++++.++.+++.+.++++|++++++++ ++.. +...+.+ ++|++|||+|+......++
T Consensus 161 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~ 239 (341)
T cd08290 161 QAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGG-RPKLALNCVGGKSATELAR 239 (341)
T ss_pred HHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCC-CceEEEECcCcHhHHHHHH
Confidence 9999999999999999997764334567788899999998765 3444 6666666 8999999999988888899
Q ss_pred hcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhh-hhccHHHHHHHHHHHHHHHHcCcccCCcceee---e
Q psy2960 302 TLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQK-ENKESAERKSMMNELTEMMRTGKLAAPAHKFV---T 377 (405)
Q Consensus 302 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~---~ 377 (405)
+++++|+++.+|........++...++.+++++.++....+.. .. |....+.+..+++++.+|.+.+.+..++ +
T Consensus 240 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 317 (341)
T cd08290 240 LLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRAN--PEEKEDMLEELAELIREGKLKAPPVEKVTDDP 317 (341)
T ss_pred HhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcC--HHHHHHHHHHHHHHHHcCCccCCcccccccCC
Confidence 9999999999985443333444445577999999998765432 22 2455667889999999999998776777 9
Q ss_pred hhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 378 LKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 378 ~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
++++++||+.+. +++..||+|+++
T Consensus 318 ~~~~~~a~~~~~--~~~~~~k~v~~~ 341 (341)
T cd08290 318 LEEFKDALANAL--KGGGGGKQVLVM 341 (341)
T ss_pred HHHHHHHHHHHh--hcCCCCeEEEeC
Confidence 999999999998 888999999874
No 27
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=1.2e-44 Score=350.82 Aligned_cols=309 Identities=21% Similarity=0.299 Sum_probs=257.3
Q ss_pred cceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCC
Q psy2960 71 YLANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVS 150 (405)
Q Consensus 71 ~~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~ 150 (405)
+.||++++.+.+++ +++++.|.|.++++||+|||.++|+|++|++.+.|.++ ..+|.++|||++|+|+++|++++
T Consensus 1 ~~~ka~~~~~~~~~---~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~--~~~p~i~G~e~~G~V~~vG~~v~ 75 (365)
T cd08277 1 IKCKAAVAWEAGKP---LVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA--TLFPVILGHEGAGIVESVGEGVT 75 (365)
T ss_pred CccEEEEEccCCCC---cEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC--CCCCeecccceeEEEEeeCCCCc
Confidence 36899999987765 88999999999999999999999999999999998765 35789999999999999999999
Q ss_pred CCCCCCEEEecCC----------------------------------------------CCCcccceEeecccceEEcCC
Q psy2960 151 SLAVGDHVIPDTQ----------------------------------------------HLGTWRNYGKFNHDVLMKVPK 184 (405)
Q Consensus 151 ~~~~GdrV~~~~~----------------------------------------------~~G~~a~~~~v~~~~~~~iP~ 184 (405)
++++||||++.+. ..|+|+||+.++...++++|+
T Consensus 76 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~ 155 (365)
T cd08277 76 NLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDP 155 (365)
T ss_pred cCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCC
Confidence 9999999987521 147899999999999999999
Q ss_pred CCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHHcCC
Q psy2960 185 DIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGA 263 (405)
Q Consensus 185 ~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~~~~lg~ 263 (405)
++++++|+++++++.|||+++...+++++|++|||+|+ |++|++++|+|+++|++ ++++.++ +++++.++++|+
T Consensus 156 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~----~~~~~~~~~~ga 230 (365)
T cd08277 156 AAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDIN----EDKFEKAKEFGA 230 (365)
T ss_pred CCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC----HHHHHHHHHcCC
Confidence 99999999999999999999877789999999999986 99999999999999994 6666543 445788899999
Q ss_pred cEEeChhh----HHH-HhhhcCCCCCcEEEECCCch-hHHHHHHhcccC-CEEEEEeccCCCCcccCcccccccCeEEEE
Q psy2960 264 DYVFTEEE----LRN-ISRDASIPKPKLALNCVGGN-SATNLLRTLVSK-GVMVTYGGMSREPVQIPTSAFIFKDITLRG 336 (405)
Q Consensus 264 ~~v~~~~d----~~~-i~~~t~g~g~Dvvld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g 336 (405)
+++++.++ +.+ +++.++ +++|+||||+|+. .+..++++++++ |+++.+|.......+++...++ +++++.|
T Consensus 231 ~~~i~~~~~~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~i~g 308 (365)
T cd08277 231 TDFINPKDSDKPVSEVIREMTG-GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLI-LGRTWKG 308 (365)
T ss_pred CcEeccccccchHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHh-hCCEEEe
Confidence 99998653 344 777776 6899999999964 456789999885 9999999654333344444454 3889998
Q ss_pred EecchhhhhhccHHHHHHHHHHHHHHHHcCccc--CCcceeeehhhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 337 HWMTRWQKENKESAERKSMMNELTEMMRTGKLA--APAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
++.+.+.. ...+++++++++++.++ +.++++|+++|+++||+.+. +++ ..|++|+
T Consensus 309 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~--~~~-~~k~~i~ 365 (365)
T cd08277 309 SFFGGFKS--------RSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMK--SGE-CIRTVIT 365 (365)
T ss_pred eecCCCCh--------HHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHH--CCC-CceEeeC
Confidence 87765321 23477889999998766 45789999999999999988 666 5698874
No 28
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=1.3e-44 Score=352.31 Aligned_cols=308 Identities=19% Similarity=0.232 Sum_probs=244.0
Q ss_pred ceeEEEEccCCCCccceEeeeecCCCCC-------CCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEE
Q psy2960 72 LANKLVYNQHGTPLRVVTVENETLNSVQ-------KHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVE 144 (405)
Q Consensus 72 ~~~a~~~~~~g~~~~~l~~~~~~~p~~~-------~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~ 144 (405)
-||++++.++++ +++++.|.|+|+ +|||||||.++|||++|++++.|.++. .+|.++|||++|+|++
T Consensus 2 ~mka~v~~~~~~----~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~--~~p~i~GhE~~G~V~~ 75 (393)
T TIGR02819 2 GNRGVVYLGPGK----VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTA--PTGLVLGHEITGEVIE 75 (393)
T ss_pred CceEEEEecCCc----eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCC--CCCccccceeEEEEEE
Confidence 489999998876 888999999874 689999999999999999999886543 5689999999999999
Q ss_pred EcCCCCCCCCCCEEEecC------------------------------------CCCCcccceEeeccc--ceEEcCCCC
Q psy2960 145 VGSDVSSLAVGDHVIPDT------------------------------------QHLGTWRNYGKFNHD--VLMKVPKDI 186 (405)
Q Consensus 145 vG~~v~~~~~GdrV~~~~------------------------------------~~~G~~a~~~~v~~~--~~~~iP~~~ 186 (405)
+|++|++|++||||+..+ ..+|+|+||+.++.. .++++|+++
T Consensus 76 vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~ 155 (393)
T TIGR02819 76 KGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRD 155 (393)
T ss_pred EcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcc
Confidence 999999999999997631 014899999999964 799999987
Q ss_pred Ch----hhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcC
Q psy2960 187 AL----TEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLG 262 (405)
Q Consensus 187 s~----~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg 262 (405)
+. .+++++.+++.|+|+++.. +++++|++|||.|+ |++|++++|+|+++|++++++++. .+++++.++++|
T Consensus 156 ~~~~~~~~~a~l~~~~~ta~~a~~~-~~~~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d~---~~~r~~~a~~~G 230 (393)
T TIGR02819 156 QALEKIRDLTMLSDIFPTGYHGAVT-AGVGPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGDL---NPARLAQARSFG 230 (393)
T ss_pred cccccccceeeeccHHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCC---CHHHHHHHHHcC
Confidence 54 4567888889999999865 78999999999766 999999999999999998776533 355789999999
Q ss_pred CcEEeChh--hHHH-HhhhcCCCCCcEEEECCCch---------------hHHHHHHhcccCCEEEEEeccCC-CCccc-
Q psy2960 263 ADYVFTEE--ELRN-ISRDASIPKPKLALNCVGGN---------------SATNLLRTLVSKGVMVTYGGMSR-EPVQI- 322 (405)
Q Consensus 263 ~~~v~~~~--d~~~-i~~~t~g~g~Dvvld~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~~-~~~~~- 322 (405)
++.+.+.+ ++.+ +.+.+++.++|++|||+|.+ .+..++++++++|+++.+|.... .....
T Consensus 231 a~~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~ 310 (393)
T TIGR02819 231 CETVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVD 310 (393)
T ss_pred CeEEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCccccccc
Confidence 98654432 3555 77888888999999999985 46778999999999999996532 21111
Q ss_pred ----------CcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccC--Ccc-eeeehhhHHHHHHHHh
Q psy2960 323 ----------PTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAA--PAH-KFVTLKNFQEALMNTM 389 (405)
Q Consensus 323 ----------~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~-~~~~~~~~~~A~~~~~ 389 (405)
.....+.+++++.+.... ..+.+.++++++++|++++ .++ ++|+|+|+++||+.+.
T Consensus 311 ~~~~~~~~~i~~~~~~~~~~~i~g~~~~-----------~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~ 379 (393)
T TIGR02819 311 AAAKTGSLSIRFGLGWAKSHSFHTGQTP-----------VMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFD 379 (393)
T ss_pred ccccccccccchHHhhccCceEEeccCC-----------hhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHh
Confidence 122233445555542110 0123467899999999875 355 7899999999999998
Q ss_pred hhcCCCCceEEEEec
Q psy2960 390 SIQGKSGVKYYIDFR 404 (405)
Q Consensus 390 ~~~~~~~gKvvl~~~ 404 (405)
+++ .+|++|+++
T Consensus 380 --~~~-~~Kvvi~~~ 391 (393)
T TIGR02819 380 --AGA-AKKFVIDPH 391 (393)
T ss_pred --hCC-ceEEEEeCC
Confidence 664 589999874
No 29
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=2.7e-44 Score=346.14 Aligned_cols=310 Identities=21% Similarity=0.231 Sum_probs=250.5
Q ss_pred eeEEEEccCCCCccceEeeeecCCCC-CCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSV-QKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSS 151 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~-~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~ 151 (405)
||++++++++. +++.+.|.|+| +++||+|||.++|+|++|++...+... ..+|.++|||++|+|+++|+++++
T Consensus 1 Mka~~~~~~~~----~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~ 74 (347)
T PRK10309 1 MKSVVNDTDGI----VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA--HYYPITLGHEFSGYVEAVGSGVDD 74 (347)
T ss_pred CceEEEeCCCc----eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC--CCCCcccccceEEEEEEeCCCCCC
Confidence 78999998765 88999999997 699999999999999999975432111 135789999999999999999999
Q ss_pred CCCCCEEEecC--------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHH
Q psy2960 152 LAVGDHVIPDT--------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRML 205 (405)
Q Consensus 152 ~~~GdrV~~~~--------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al 205 (405)
|++||||++.+ ...|+|+||+.++++.++++|+++++++|+.++ .+.++++++
T Consensus 75 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~ 153 (347)
T PRK10309 75 LHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAF 153 (347)
T ss_pred CCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHH
Confidence 99999999753 125899999999999999999999999999875 456678886
Q ss_pred HhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcE-EEEecCCcchHHHHHHHHHcCCcEEeChhhH-HH-HhhhcCCC
Q psy2960 206 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKT-INIVRNRDDIDKLKSYLKSLGADYVFTEEEL-RN-ISRDASIP 282 (405)
Q Consensus 206 ~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v-~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~-~~-i~~~t~g~ 282 (405)
....+++|++|||+|+ |++|++++|+|+.+|+++ +++.++ +++++.++++|+++++++++. .+ +.+.+.+.
T Consensus 154 -~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~----~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~ 227 (347)
T PRK10309 154 -HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDIN----SEKLALAKSLGAMQTFNSREMSAPQIQSVLREL 227 (347)
T ss_pred -HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC----HHHHHHHHHcCCceEecCcccCHHHHHHHhcCC
Confidence 4478899999999986 999999999999999985 555433 345778899999999986532 23 77777777
Q ss_pred CCc-EEEECCCch-hHHHHHHhcccCCEEEEEeccCCCCcccC---cccccccCeEEEEEecchhhhhhccHHHHHHHHH
Q psy2960 283 KPK-LALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIP---TSAFIFKDITLRGHWMTRWQKENKESAERKSMMN 357 (405)
Q Consensus 283 g~D-vvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~---~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~ 357 (405)
++| ++|||+|++ .+..++++++++|+++.+|.... +.+++ ...++.+++++.|++.+..... ..+.++
T Consensus 228 ~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~------~~~~~~ 300 (347)
T PRK10309 228 RFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHH-DLHLTSATFGKILRKELTVIGSWMNYSSPW------PGQEWE 300 (347)
T ss_pred CCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CcccChhhhhHHhhcCcEEEEEeccccCCc------chhHHH
Confidence 898 999999985 55778999999999999996542 22222 2356679999999876421110 124577
Q ss_pred HHHHHHHcCccc--CCcceeeehhhHHHHHHHHhhhcCCCCceEEEEec
Q psy2960 358 ELTEMMRTGKLA--APAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 404 (405)
Q Consensus 358 ~~~~~~~~g~l~--~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~~ 404 (405)
++++++++|+++ +.++++|+|+|+++||+.+. +++..||+|++++
T Consensus 301 ~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~--~~~~~gKvvv~~~ 347 (347)
T PRK10309 301 TASRLLTERKLSLEPLIAHRGSFESFAQAVRDLA--GNPMPGKVLLQIP 347 (347)
T ss_pred HHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHh--cCCcceEEEEeCC
Confidence 888999999985 55889999999999999999 7888899999874
No 30
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=3.1e-44 Score=344.50 Aligned_cols=312 Identities=21% Similarity=0.233 Sum_probs=254.6
Q ss_pred eeEEEEccCCCCccceEeeeecC----CCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccce--EEEEEEEc
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETL----NSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEG--VGEVVEVG 146 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~----p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~--~G~V~~vG 146 (405)
+|+|....+. .+.+++.+.|+ |+|++|||||||+|+|||+.|++...|..+....+|+++|+++ .|++..+|
T Consensus 8 ~~~~~~~~~~--~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~ 85 (338)
T cd08295 8 LKAYVTGFPK--ESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVD 85 (338)
T ss_pred EecCCCCCCC--ccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEe
Confidence 4555533333 35699999988 8899999999999999999999999885432124578899865 45666688
Q ss_pred CCCCCCCCCCEEEecCCCCCcccceEeecc-cceEEcC-CCCChh-hhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCC
Q psy2960 147 SDVSSLAVGDHVIPDTQHLGTWRNYGKFNH-DVLMKVP-KDIALT-EISGITSNPCTAYRMLKDYNSLSPGDVVIQNGAN 223 (405)
Q Consensus 147 ~~v~~~~~GdrV~~~~~~~G~~a~~~~v~~-~~~~~iP-~~~s~~-~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~ 223 (405)
+++++|++||+|+++ |+|+||+++++ ..++++| ++++++ ++++++++++|||+++.+.+++++|++|||+|++
T Consensus 86 ~~v~~~~vGd~V~~~----g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~ 161 (338)
T cd08295 86 SGNPDFKVGDLVWGF----TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAAS 161 (338)
T ss_pred cCCCCCCCCCEEEec----CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCc
Confidence 999999999999977 78999999999 7999995 678887 7999999999999999888899999999999999
Q ss_pred cHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHH-cCCcEEeChh---hHHH-HhhhcCCCCCcEEEECCCchhHHH
Q psy2960 224 SACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADYVFTEE---ELRN-ISRDASIPKPKLALNCVGGNSATN 298 (405)
Q Consensus 224 G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~-lg~~~v~~~~---d~~~-i~~~t~g~g~Dvvld~~g~~~~~~ 298 (405)
|++|++++|+|+.+|+++++++++++ +.+.+++ +|+++++++. ++.+ +.+.++ .++|++||++|+.....
T Consensus 162 G~vG~~aiqlAk~~G~~Vi~~~~~~~----~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~-~gvd~v~d~~g~~~~~~ 236 (338)
T cd08295 162 GAVGQLVGQLAKLKGCYVVGSAGSDE----KVDLLKNKLGFDDAFNYKEEPDLDAALKRYFP-NGIDIYFDNVGGKMLDA 236 (338)
T ss_pred cHHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHhcCCceeEEcCCcccHHHHHHHhCC-CCcEEEEECCCHHHHHH
Confidence 99999999999999999998886643 4677777 9999999853 4555 676664 78999999999988888
Q ss_pred HHHhcccCCEEEEEeccCCCCc-----ccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcc
Q psy2960 299 LLRTLVSKGVMVTYGGMSREPV-----QIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAH 373 (405)
Q Consensus 299 ~~~~l~~~G~~v~~g~~~~~~~-----~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~ 373 (405)
++++++++|+++.+|....... ..+...++.+++++.+++...+. +...+.++++++++++|++++.+.
T Consensus 237 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~~~~~~~~~l~~~g~l~~~~~ 310 (338)
T cd08295 237 VLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYL------HRYPEFLEEMSGYIKEGKLKYVED 310 (338)
T ss_pred HHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhH------HHHHHHHHHHHHHHHCCCeEceee
Confidence 9999999999999985433211 12234456688888887654321 223456888999999999998777
Q ss_pred eeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 374 KFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 374 ~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
..|+++++++||+.+. +++..||+|+++
T Consensus 311 ~~~~l~~~~~A~~~~~--~~~~~GkvVl~~ 338 (338)
T cd08295 311 IADGLESAPEAFVGLF--TGSNIGKQVVKV 338 (338)
T ss_pred cccCHHHHHHHHHHHh--cCCCCceEEEEC
Confidence 7899999999999999 888899999874
No 31
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=3.5e-44 Score=339.30 Aligned_cols=294 Identities=18% Similarity=0.204 Sum_probs=238.2
Q ss_pred ceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecC-hhhhhhhcccCCCC--CCCCCCCccceEEEEEEEcCC
Q psy2960 72 LANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVN-PADINTIQGVYPIK--PTLPAVPGFEGVGEVVEVGSD 148 (405)
Q Consensus 72 ~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~-~~D~~~~~g~~~~~--~~~p~~lG~E~~G~V~~vG~~ 148 (405)
+||++++.+++. +++++.|.|+|+++||||||.++||| ++|++.+.|.++.. ..+|.++|||++|+|+++|++
T Consensus 1 ~~ka~~~~~~~~----l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~ 76 (308)
T TIGR01202 1 KTQAIVLSGPNQ----IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPD 76 (308)
T ss_pred CceEEEEeCCCe----EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCC
Confidence 588999987664 89999999999999999999999996 79999998876532 257999999999999999999
Q ss_pred CCCCCCCCEEEecCC--------CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEe
Q psy2960 149 VSSLAVGDHVIPDTQ--------HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQN 220 (405)
Q Consensus 149 v~~~~~GdrV~~~~~--------~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ 220 (405)
+ +|++||||+.... ..|+|+||+.++++.++++|++++++. ++++ .+.|||+++.. . ..+|++|||+
T Consensus 77 v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~ 151 (308)
T TIGR01202 77 T-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIV 151 (308)
T ss_pred C-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEE
Confidence 8 6999999986321 259999999999999999999999864 5554 57899999965 3 3468999999
Q ss_pred CCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCCchh-HHHH
Q psy2960 221 GANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVGGNS-ATNL 299 (405)
Q Consensus 221 ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g~~~-~~~~ 299 (405)
|+ |++|++++|+|+++|++++++++.. +++++.+.+ ..++|+++. .+.++|+||||+|++. +..+
T Consensus 152 G~-G~vG~~a~q~ak~~G~~~v~~~~~~---~~rl~~a~~---~~~i~~~~~-------~~~g~Dvvid~~G~~~~~~~~ 217 (308)
T TIGR01202 152 GH-GTLGRLLARLTKAAGGSPPAVWETN---PRRRDGATG---YEVLDPEKD-------PRRDYRAIYDASGDPSLIDTL 217 (308)
T ss_pred CC-CHHHHHHHHHHHHcCCceEEEeCCC---HHHHHhhhh---ccccChhhc-------cCCCCCEEEECCCCHHHHHHH
Confidence 86 9999999999999999987776432 344554443 345554321 2468999999999865 5778
Q ss_pred HHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccC--Ccceeee
Q psy2960 300 LRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAA--PAHKFVT 377 (405)
Q Consensus 300 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~ 377 (405)
+++++++|+++.+|... .+..++...++.|++++.++.... .+.++++++++++|++++ .++++||
T Consensus 218 ~~~l~~~G~iv~~G~~~-~~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~~l~~~g~i~~~~~it~~~~ 285 (308)
T TIGR01202 218 VRRLAKGGEIVLAGFYT-EPVNFDFVPAFMKEARLRIAAEWQ-----------PGDLHAVRELIESGALSLDGLITHQRP 285 (308)
T ss_pred HHhhhcCcEEEEEeecC-CCcccccchhhhcceEEEEecccc-----------hhHHHHHHHHHHcCCCChhhccceeec
Confidence 99999999999999643 334566666778899998865432 345888999999999986 4789999
Q ss_pred hhhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 378 LKNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 378 ~~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
|+|+++||+.+. ++...+|++|+
T Consensus 286 l~~~~~A~~~~~--~~~~~~Kv~~~ 308 (308)
T TIGR01202 286 ASDAAEAYMTAF--SDPDCLKMILD 308 (308)
T ss_pred HHHHHHHHHHHh--cCcCceEEEeC
Confidence 999999999888 66778999974
No 32
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=5.8e-44 Score=343.99 Aligned_cols=304 Identities=19% Similarity=0.257 Sum_probs=253.2
Q ss_pred EEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCCCCC
Q psy2960 76 LVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSLAVG 155 (405)
Q Consensus 76 ~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~~G 155 (405)
++++++|++ +++++.|.|.|+++||+|||.++|||++|++.+.+.+.....+|.++|||++|+|+++|++++.+ +|
T Consensus 2 ~~~~~~g~~---~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~G 77 (349)
T TIGR03201 2 WMMTEPGKP---MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IG 77 (349)
T ss_pred ceEecCCCC---ceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CC
Confidence 456677764 78899999999999999999999999999998754332223568999999999999999999887 99
Q ss_pred CEEEecC--------------------------CCCCcccceEeecccceEEcCC------CCChhhhccCCCcHHHHHH
Q psy2960 156 DHVIPDT--------------------------QHLGTWRNYGKFNHDVLMKVPK------DIALTEISGITSNPCTAYR 203 (405)
Q Consensus 156 drV~~~~--------------------------~~~G~~a~~~~v~~~~~~~iP~------~~s~~~Aa~~~~~~~ta~~ 203 (405)
|||+..+ ...|+|+||+.++.+.++++|+ ++++++++++++++.|+|+
T Consensus 78 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~ 157 (349)
T TIGR03201 78 KAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQ 157 (349)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHH
Confidence 9998631 0258999999999999999999 8999999999999999999
Q ss_pred HHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChh-----hHHH-Hhh
Q psy2960 204 MLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE-----ELRN-ISR 277 (405)
Q Consensus 204 al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~-----d~~~-i~~ 277 (405)
++.. .++++|++|+|+|+ |++|++++|+|+++|++++++.++ +++++.++++|+++++++. ++.+ +++
T Consensus 158 a~~~-~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~----~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~ 231 (349)
T TIGR03201 158 AAVQ-AGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDID----PEKLEMMKGFGADLTLNPKDKSAREVKKLIKA 231 (349)
T ss_pred HHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCC----HHHHHHHHHhCCceEecCccccHHHHHHHHHh
Confidence 9975 78999999999999 999999999999999998887644 3457888999999998753 3444 777
Q ss_pred hcCCCCCc----EEEECCCchhH-HHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHH
Q psy2960 278 DASIPKPK----LALNCVGGNSA-TNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAER 352 (405)
Q Consensus 278 ~t~g~g~D----vvld~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~ 352 (405)
.|++.|+| +||||+|+... ..++++++++|+++.+|.... ...++...++.++.++.|.+...
T Consensus 232 ~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~~~g~~~~~----------- 299 (349)
T TIGR03201 232 FAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMA-KTEYRLSNLMAFHARALGNWGCP----------- 299 (349)
T ss_pred hcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCC-CcccCHHHHhhcccEEEEEecCC-----------
Confidence 88888887 89999998655 467999999999999996532 23455556667788888877432
Q ss_pred HHHHHHHHHHHHcCcccCC-cceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 353 KSMMNELTEMMRTGKLAAP-AHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 353 ~~~~~~~~~~~~~g~l~~~-~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
.+.++++++++++|++++. +.+.|+|+++++||+.+. +++..||+++++
T Consensus 300 ~~~~~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~~--~~~~~~k~~~~~ 349 (349)
T TIGR03201 300 PDRYPAALDLVLDGKIQLGPFVERRPLDQIEHVFAAAH--HHKLKRRAILTP 349 (349)
T ss_pred HHHHHHHHHHHHcCCCCcccceEEecHHHHHHHHHHHH--cCCccceEEecC
Confidence 2357889999999999763 445799999999999999 888899999864
No 33
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=2.3e-43 Score=339.48 Aligned_cols=302 Identities=21% Similarity=0.289 Sum_probs=239.2
Q ss_pred cceEeeeecCCCCC-CCeEEEEEEEeecChhhhhhhcccC--CCCCCCCCCCccceEEEEEEEcCCCCCCCCCCEEEecC
Q psy2960 86 RVVTVENETLNSVQ-KHEVVVKMLVAPVNPADINTIQGVY--PIKPTLPAVPGFEGVGEVVEVGSDVSSLAVGDHVIPDT 162 (405)
Q Consensus 86 ~~l~~~~~~~p~~~-~~eVlVkv~a~gi~~~D~~~~~g~~--~~~~~~p~~lG~E~~G~V~~vG~~v~~~~~GdrV~~~~ 162 (405)
+.+++.+.|.|+|. +|||||||+|+|||+.|........ .....+|.++|||++|+|+++|++|++|++||||+++.
T Consensus 21 ~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 100 (345)
T cd08293 21 ENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN 100 (345)
T ss_pred cceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC
Confidence 66899999999874 9999999999999999964332111 11124678999999999999999999999999999872
Q ss_pred CCCCcccceEeecccceEEcCCCCChhh----hccCCCcHHHHHHHHHhhcCCCCC--CEEEEeCCCcHHHHHHHHHHHH
Q psy2960 163 QHLGTWRNYGKFNHDVLMKVPKDIALTE----ISGITSNPCTAYRMLKDYNSLSPG--DVVIQNGANSACGQNVIQIARH 236 (405)
Q Consensus 163 ~~~G~~a~~~~v~~~~~~~iP~~~s~~~----Aa~~~~~~~ta~~al~~~~~~~~g--~~VLI~ga~G~vG~~aiqla~~ 236 (405)
++|+||++++++.++++|+++++++ +++++.+++|||+++.+.+++++| ++|||+|++|++|++++|+|++
T Consensus 101 ---~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~ 177 (345)
T cd08293 101 ---WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRL 177 (345)
T ss_pred ---CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 6899999999999999999865443 567788999999999887889887 9999999999999999999999
Q ss_pred cCC-cEEEEecCCcchHHHHHHHHH-cCCcEEeChh--hHHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEE
Q psy2960 237 WGL-KTINIVRNRDDIDKLKSYLKS-LGADYVFTEE--ELRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVT 311 (405)
Q Consensus 237 ~G~-~v~~~~~~~~~~~~~~~~~~~-lg~~~v~~~~--d~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~ 311 (405)
+|+ ++++++++++ +.+.+++ +|++++++++ ++.+ +++.++ +++|++|||+|+.....++++++++|+++.
T Consensus 178 ~G~~~Vi~~~~s~~----~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~-~gvd~vid~~g~~~~~~~~~~l~~~G~iv~ 252 (345)
T cd08293 178 LGCSRVVGICGSDE----KCQLLKSELGFDAAINYKTDNVAERLRELCP-EGVDVYFDNVGGEISDTVISQMNENSHIIL 252 (345)
T ss_pred cCCCEEEEEcCCHH----HHHHHHHhcCCcEEEECCCCCHHHHHHHHCC-CCceEEEECCCcHHHHHHHHHhccCCEEEE
Confidence 999 7888876543 4566665 9999999865 3555 777775 789999999999888889999999999999
Q ss_pred EeccCCC--CcccCc------cc-ccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHH
Q psy2960 312 YGGMSRE--PVQIPT------SA-FIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQ 382 (405)
Q Consensus 312 ~g~~~~~--~~~~~~------~~-~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~ 382 (405)
+|..... +...+. .. ...+++++.++..... +....+.++++.+++++|.+++.+...+++++++
T Consensus 253 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~ 326 (345)
T cd08293 253 CGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNY------KDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAG 326 (345)
T ss_pred EeeeecccCccCccccccchhHHHhhhcceEEEEEEeecc------HhHHHHHHHHHHHHHHCCCccceeEEeecHHHHH
Confidence 9853211 111110 11 1234555544432221 1334566888999999999998766678999999
Q ss_pred HHHHHHhhhcCCCCceEEEEe
Q psy2960 383 EALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 383 ~A~~~~~~~~~~~~gKvvl~~ 403 (405)
+||+.+. +++..||+|+++
T Consensus 327 ~A~~~~~--~~~~~gkvvl~~ 345 (345)
T cd08293 327 EAFQSMM--NGGNIGKQIVKV 345 (345)
T ss_pred HHHHHHh--cCCCCCeEEEEC
Confidence 9999999 888899999975
No 34
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1.4e-43 Score=338.67 Aligned_cols=308 Identities=24% Similarity=0.332 Sum_probs=253.3
Q ss_pred ceeEEEEccC--CCC-ccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCC
Q psy2960 72 LANKLVYNQH--GTP-LRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSD 148 (405)
Q Consensus 72 ~~~a~~~~~~--g~~-~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~ 148 (405)
+||+|++.++ |++ .+.+++++.|.|+|++|||||||.++|||+.|.....+ + ..+|.++|+|++|+|++ .
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~--~--~~~p~v~G~e~~G~V~~---~ 74 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR--L--NEGDTMIGTQVAKVIES---K 74 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc--C--CCCCcEecceEEEEEec---C
Confidence 5999999993 443 26799999999999999999999999999988653221 1 13588999999999985 5
Q ss_pred CCCCCCCCEEEecCCCCCcccceEeeccc---ceEEcCCCCC--h---hhhccCCCcHHHHHHHHHhhcCCCCCCEEEEe
Q psy2960 149 VSSLAVGDHVIPDTQHLGTWRNYGKFNHD---VLMKVPKDIA--L---TEISGITSNPCTAYRMLKDYNSLSPGDVVIQN 220 (405)
Q Consensus 149 v~~~~~GdrV~~~~~~~G~~a~~~~v~~~---~~~~iP~~~s--~---~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ 220 (405)
+++|++||||++. ++|++|+.++.+ .++++|++++ + ..+++++++++|||+++...+++++|++|||+
T Consensus 75 ~~~~~~Gd~V~~~----~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ 150 (329)
T cd08294 75 NSKFPVGTIVVAS----FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVN 150 (329)
T ss_pred CCCCCCCCEEEee----CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEe
Confidence 5789999999976 589999999999 9999999998 2 33357889999999999888999999999999
Q ss_pred CCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChh--hHHH-HhhhcCCCCCcEEEECCCchhHH
Q psy2960 221 GANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPKPKLALNCVGGNSAT 297 (405)
Q Consensus 221 ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~--d~~~-i~~~t~g~g~Dvvld~~g~~~~~ 297 (405)
|++|++|++++|+|+.+|+++++++++++ +.+.++++|++++++++ ++.+ +++.++ +++|++||++|++...
T Consensus 151 ga~g~vG~~aiqlA~~~G~~vi~~~~s~~----~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~-~gvd~vld~~g~~~~~ 225 (329)
T cd08294 151 GAAGAVGSLVGQIAKIKGCKVIGCAGSDD----KVAWLKELGFDAVFNYKTVSLEEALKEAAP-DGIDCYFDNVGGEFSS 225 (329)
T ss_pred cCccHHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHcCCCEEEeCCCccHHHHHHHHCC-CCcEEEEECCCHHHHH
Confidence 99999999999999999999998886643 47888899999999875 3555 776665 7899999999998888
Q ss_pred HHHHhcccCCEEEEEeccCCCCc------ccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCC
Q psy2960 298 NLLRTLVSKGVMVTYGGMSREPV------QIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAP 371 (405)
Q Consensus 298 ~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ 371 (405)
.++++++++|+++.+|....... ......+..+++++.+++...+. ....+.++++++++++|.+++.
T Consensus 226 ~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~~~~~~~l~~~g~i~~~ 299 (329)
T cd08294 226 TVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQ------DRWPEALKQLLKWIKEGKLKYR 299 (329)
T ss_pred HHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhH------HHHHHHHHHHHHHHHCCCCcCC
Confidence 89999999999999985322111 11223455688899887654321 2335678889999999999987
Q ss_pred cceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 372 AHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 372 ~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
+..+|+++++++||+.+. +++..||+|+++
T Consensus 300 ~~~~~~l~~~~~A~~~~~--~~~~~gkvvv~~ 329 (329)
T cd08294 300 EHVTEGFENMPQAFIGML--KGENTGKAIVKV 329 (329)
T ss_pred cccccCHHHHHHHHHHHH--cCCCCCeEEEeC
Confidence 777899999999999999 889999999974
No 35
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=1.2e-43 Score=342.20 Aligned_cols=304 Identities=21% Similarity=0.319 Sum_probs=254.1
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhccc-CCC---------CCCCCCCCccceEEEE
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGV-YPI---------KPTLPAVPGFEGVGEV 142 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~---------~~~~p~~lG~E~~G~V 142 (405)
||++++++++. +++++.|.|+|+++||+||+.++++|++|++.+.+. ... ...+|.++|||++|+|
T Consensus 1 mka~~~~~~~~----l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V 76 (351)
T cd08233 1 MKAARYHGRKD----IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVV 76 (351)
T ss_pred CceEEEecCCc----eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEE
Confidence 78999998764 889999999999999999999999999999876542 111 0136899999999999
Q ss_pred EEEcCCCCCCCCCCEEEecCC---------------------------CCCcccceEeecccceEEcCCCCChhhhccCC
Q psy2960 143 VEVGSDVSSLAVGDHVIPDTQ---------------------------HLGTWRNYGKFNHDVLMKVPKDIALTEISGIT 195 (405)
Q Consensus 143 ~~vG~~v~~~~~GdrV~~~~~---------------------------~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~ 195 (405)
+++|+++++|++||+|++... ..|+|++|+.++...++++|+++++++|+.+
T Consensus 77 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~- 155 (351)
T cd08233 77 VEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV- 155 (351)
T ss_pred EEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-
Confidence 999999999999999997321 1589999999999999999999999999876
Q ss_pred CcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHHcCCcEEeChhh--H
Q psy2960 196 SNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--L 272 (405)
Q Consensus 196 ~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~-~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~ 272 (405)
.++.|||+++ ..+++++|++|||+|+ |++|++++|+|+.+|+ +++++.+++ ++.+.++++|++.++++++ +
T Consensus 156 ~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~----~~~~~~~~~ga~~~i~~~~~~~ 229 (351)
T cd08233 156 EPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSE----ARRELAEELGATIVLDPTEVDV 229 (351)
T ss_pred cHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH----HHHHHHHHhCCCEEECCCccCH
Confidence 6788999999 5689999999999986 8999999999999999 566665443 3467778899999998754 5
Q ss_pred HH-HhhhcCCCCCcEEEECCCc-hhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHH
Q psy2960 273 RN-ISRDASIPKPKLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESA 350 (405)
Q Consensus 273 ~~-i~~~t~g~g~Dvvld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~ 350 (405)
.+ +++.++++++|++|||+|+ .....++++++++|+++.+|... .+..++...++.+++++.+++...
T Consensus 230 ~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~--------- 299 (351)
T cd08233 230 VAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWE-KPISFNPNDLVLKEKTLTGSICYT--------- 299 (351)
T ss_pred HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCC-CCCccCHHHHHhhCcEEEEEeccC---------
Confidence 55 8888878889999999986 45677899999999999999654 344566666778999999986532
Q ss_pred HHHHHHHHHHHHHHcCcccC--CcceeeehhhH-HHHHHHHhhhcCCCC-ceEEE
Q psy2960 351 ERKSMMNELTEMMRTGKLAA--PAHKFVTLKNF-QEALMNTMSIQGKSG-VKYYI 401 (405)
Q Consensus 351 ~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~-~~A~~~~~~~~~~~~-gKvvl 401 (405)
.+.++++++++++|++++ .++++|+++|+ ++||+.+. +++.. ||+||
T Consensus 300 --~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~--~~~~~~~k~v~ 350 (351)
T cd08233 300 --REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELI--NDKEQHVKILV 350 (351)
T ss_pred --cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHH--hCCCCceEEEe
Confidence 345788999999999964 46789999996 79999998 77774 99987
No 36
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=9.3e-44 Score=349.27 Aligned_cols=312 Identities=16% Similarity=0.159 Sum_probs=248.7
Q ss_pred cceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhh-cccCC-C----CCCCCCCCccceEEEEEE
Q psy2960 71 YLANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTI-QGVYP-I----KPTLPAVPGFEGVGEVVE 144 (405)
Q Consensus 71 ~~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~-~g~~~-~----~~~~p~~lG~E~~G~V~~ 144 (405)
|+||++++.+++. +++++.|.|+|+++||+|||.++|||++|++.+ .|... . ...+|.++|||++|+|++
T Consensus 1 m~~~a~~~~~~~~----l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~ 76 (410)
T cd08238 1 MKTKAWRMYGKGD----LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILK 76 (410)
T ss_pred CCcEEEEEEcCCc----eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEE
Confidence 5699999998875 899999999999999999999999999999976 45421 1 124688999999999999
Q ss_pred EcCCCC-CCCCCCEEEecCC---------------CCCcccceEeeccc----ceEEcCCCCChhhhccCCCc--HHHHH
Q psy2960 145 VGSDVS-SLAVGDHVIPDTQ---------------HLGTWRNYGKFNHD----VLMKVPKDIALTEISGITSN--PCTAY 202 (405)
Q Consensus 145 vG~~v~-~~~~GdrV~~~~~---------------~~G~~a~~~~v~~~----~~~~iP~~~s~~~Aa~~~~~--~~ta~ 202 (405)
+|++|+ +|++||||++.+. .+|+|+||+.++.+ .++++|+++++++|+.+... ..+++
T Consensus 77 vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~ 156 (410)
T cd08238 77 VGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAY 156 (410)
T ss_pred eCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHh
Confidence 999998 6999999987521 25999999999987 68999999999999876321 12244
Q ss_pred HHH--------HhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCC---cEEEEecCCcchHHHHHHHHHc--------CC
Q psy2960 203 RML--------KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL---KTINIVRNRDDIDKLKSYLKSL--------GA 263 (405)
Q Consensus 203 ~al--------~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~---~v~~~~~~~~~~~~~~~~~~~l--------g~ 263 (405)
.++ ...+++++|++|+|+|++|++|++++|+|+++|+ +++++.++ +++++.++++ |+
T Consensus 157 ~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~----~~r~~~a~~~~~~~~~~~Ga 232 (410)
T cd08238 157 TANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVN----DERLARAQRLFPPEAASRGI 232 (410)
T ss_pred hhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCC----HHHHHHHHHhccccccccCc
Confidence 332 2457889999999999889999999999999864 57766543 4457788887 77
Q ss_pred c-EEeChh---hHHH-HhhhcCCCCCcEEEECCCc-hhHHHHHHhcccCCEEEEEeccCCC--CcccCcccccccCeEEE
Q psy2960 264 D-YVFTEE---ELRN-ISRDASIPKPKLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSRE--PVQIPTSAFIFKDITLR 335 (405)
Q Consensus 264 ~-~v~~~~---d~~~-i~~~t~g~g~Dvvld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~k~~~~~ 335 (405)
+ .+++++ ++.+ +++.|++.++|++||++|. ..+..++++++++|+++.++..... ..+++...++.+++++.
T Consensus 233 ~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~ 312 (410)
T cd08238 233 ELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYV 312 (410)
T ss_pred eEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEE
Confidence 6 567753 4555 8888888899999999986 5556789999999998887643211 23456667778999999
Q ss_pred EEecchhhhhhccHHHHHHHHHHHHHHHHcCcccC--CcceeeehhhHHHHHHHHhhhcCCCCceEEEEec
Q psy2960 336 GHWMTRWQKENKESAERKSMMNELTEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 404 (405)
Q Consensus 336 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~~ 404 (405)
|++... .+.++++++++++|++++ .++++|+|+++++||+.+. ++..||+||.++
T Consensus 313 g~~~~~-----------~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~---~~~~gKvvl~~~ 369 (410)
T cd08238 313 GTSGGN-----------TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP---GIPGGKKLIYTQ 369 (410)
T ss_pred EeCCCC-----------HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh---ccCCceEEEECC
Confidence 987532 245788999999999997 4789999999999999987 356799999874
No 37
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=1.2e-43 Score=342.53 Aligned_cols=306 Identities=22% Similarity=0.273 Sum_probs=236.7
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCC--CCCCCCCccceEEEEEEEcCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIK--PTLPAVPGFEGVGEVVEVGSDVS 150 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~~p~~lG~E~~G~V~~vG~~v~ 150 (405)
||+++++..+. + +++++.|.|+|+++||||||.|+|||++|++.+.|.++.. ..+|.++|||++|+|+++|++ +
T Consensus 1 mka~~~~~~~~--~-l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~ 76 (355)
T cd08230 1 MKAIAVKPGKP--G-VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-S 76 (355)
T ss_pred CceeEecCCCC--C-CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-C
Confidence 68899986443 2 8899999999999999999999999999999999875432 235789999999999999999 9
Q ss_pred CCCCCCEEEecCC-----------------------------CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHH
Q psy2960 151 SLAVGDHVIPDTQ-----------------------------HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTA 201 (405)
Q Consensus 151 ~~~~GdrV~~~~~-----------------------------~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta 201 (405)
.|++||||+..+. .+|+|+||++++++.++++|++++ + ++++..++.++
T Consensus 77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~-~a~~~~p~~~~ 154 (355)
T cd08230 77 GLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-D-VGVLLEPLSVV 154 (355)
T ss_pred CCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-c-ceeecchHHHH
Confidence 9999999986421 248899999999999999999999 4 44444566655
Q ss_pred HHHHHh------hcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHH
Q psy2960 202 YRMLKD------YNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNI 275 (405)
Q Consensus 202 ~~al~~------~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i 275 (405)
+.++.. ..++++|++|||+|+ |++|++++|+|+++|++++++.++. ..+++++.++++|++.+ ++.+.. +
T Consensus 155 ~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~-~~~~~~~~~~~~Ga~~v-~~~~~~-~ 230 (355)
T cd08230 155 EKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRD-PPDPKADIVEELGATYV-NSSKTP-V 230 (355)
T ss_pred HHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEe-cCCccc-h
Confidence 554432 123679999999997 9999999999999999988887542 13556889999999975 543311 1
Q ss_pred hhhcCCCCCcEEEECCCch-hHHHHHHhcccCCEEEEEeccCC-CCcccC----cccccccCeEEEEEecchhhhhhccH
Q psy2960 276 SRDASIPKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSR-EPVQIP----TSAFIFKDITLRGHWMTRWQKENKES 349 (405)
Q Consensus 276 ~~~t~g~g~Dvvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~----~~~~~~k~~~~~g~~~~~~~~~~~~~ 349 (405)
.+.....++|+||||+|++ .+..++++++++|+++.+|.... ...+++ ...++.|++++.|++...
T Consensus 231 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~-------- 302 (355)
T cd08230 231 AEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNAN-------- 302 (355)
T ss_pred hhhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCc--------
Confidence 1111245899999999975 45778999999999999996544 233344 245677999999986543
Q ss_pred HHHHHHHHHHHHHHHcCc------ccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 350 AERKSMMNELTEMMRTGK------LAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 350 ~~~~~~~~~~~~~~~~g~------l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
.+.++++++++.++. +++.++++|+++|+++||+.+. ++. +|+||++
T Consensus 303 ---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~--~~~--~K~v~~~ 355 (355)
T cd08230 303 ---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKP--DGE--IKVVIEW 355 (355)
T ss_pred ---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcc--cCC--eEEEeeC
Confidence 123566677777665 5666889999999999999887 543 5999975
No 38
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=1.5e-43 Score=339.77 Aligned_cols=297 Identities=17% Similarity=0.211 Sum_probs=232.8
Q ss_pred ceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCC---CCCCCCCCccceEEEEEEEcCC
Q psy2960 72 LANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPI---KPTLPAVPGFEGVGEVVEVGSD 148 (405)
Q Consensus 72 ~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~~p~~lG~E~~G~V~~vG~~ 148 (405)
..|+++++++++ +++++.|.|+ +++||||||.++|||++|++.+.|.++. ...+|.++|||++|+|+++|.+
T Consensus 2 ~~~~~~~~~~~~----~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~ 76 (341)
T cd08237 2 INQVYRLVRPKF----FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG 76 (341)
T ss_pred cccceEEeccce----EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC
Confidence 467888988876 8999999995 9999999999999999999999987532 1357999999999999998764
Q ss_pred CCCCCCCCEEEecCC-----------------------CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHH
Q psy2960 149 VSSLAVGDHVIPDTQ-----------------------HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRML 205 (405)
Q Consensus 149 v~~~~~GdrV~~~~~-----------------------~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al 205 (405)
.|++||||+..+. .+|+|+||+++++++++++|+++++++||.+. +++++|+++
T Consensus 77 --~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~-~~~~a~~a~ 153 (341)
T cd08237 77 --TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTE-LVSVGVHAI 153 (341)
T ss_pred --ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhhc-hHHHHHHHH
Confidence 7999999987531 24889999999999999999999999887554 888899998
Q ss_pred Hhh--cCCCCCCEEEEeCCCcHHHHHHHHHHHH-cCC-cEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCC
Q psy2960 206 KDY--NSLSPGDVVIQNGANSACGQNVIQIARH-WGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASI 281 (405)
Q Consensus 206 ~~~--~~~~~g~~VLI~ga~G~vG~~aiqla~~-~G~-~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g 281 (405)
... +.+++|++|||.|+ |++|++++|+|+. +|+ +++++..+ +++++.++..+++..++ ++ +..
T Consensus 154 ~~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~----~~k~~~a~~~~~~~~~~--~~------~~~ 220 (341)
T cd08237 154 SRFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKH----QEKLDLFSFADETYLID--DI------PED 220 (341)
T ss_pred HHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCc----HhHHHHHhhcCceeehh--hh------hhc
Confidence 642 45789999999997 9999999999986 564 66666543 34567777766654332 11 113
Q ss_pred CCCcEEEECCCch----hHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHH
Q psy2960 282 PKPKLALNCVGGN----SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMN 357 (405)
Q Consensus 282 ~g~Dvvld~~g~~----~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~ 357 (405)
.++|+||||+|+. .+..++++++++|+++.+|... .+..++...++.|++++.|++... .+.++
T Consensus 221 ~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~~k~~~i~g~~~~~-----------~~~~~ 288 (341)
T cd08237 221 LAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSE-YPVPINTRMVLEKGLTLVGSSRST-----------REDFE 288 (341)
T ss_pred cCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecC-CCcccCHHHHhhCceEEEEecccC-----------HHHHH
Confidence 3699999999953 4567899999999999999532 334556666778999999986432 23477
Q ss_pred HHHHHHHcC-----cccCCcceeeehh---hHHHHHHHHhhhcCCCCceEEEEec
Q psy2960 358 ELTEMMRTG-----KLAAPAHKFVTLK---NFQEALMNTMSIQGKSGVKYYIDFR 404 (405)
Q Consensus 358 ~~~~~~~~g-----~l~~~~~~~~~~~---~~~~A~~~~~~~~~~~~gKvvl~~~ 404 (405)
++++++++| .+++.++++|+++ ++.+||+.+. ++ ..||+||+++
T Consensus 289 ~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~--~~-~~gKvvi~~~ 340 (341)
T cd08237 289 RAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDL--TN-SWGKTVMEWE 340 (341)
T ss_pred HHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHh--hc-CcceEEEEee
Confidence 888999998 5667788999985 5666666555 33 6899999875
No 39
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=3.6e-43 Score=335.36 Aligned_cols=294 Identities=22% Similarity=0.316 Sum_probs=242.8
Q ss_pred cceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCCCCCCEEEecCCCC
Q psy2960 86 RVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSLAVGDHVIPDTQHL 165 (405)
Q Consensus 86 ~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~ 165 (405)
+.+++.+.|.|+|++|||||||.|+|||+.|.. |.++.. ..|.++|.|++|+|+++|+ +|++||||+++
T Consensus 17 ~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~-~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~---- 85 (325)
T TIGR02825 17 SDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLK-EGDTMMGQQVARVVESKNV---ALPKGTIVLAS---- 85 (325)
T ss_pred CceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCC-CCCcEecceEEEEEEeCCC---CCCCCCEEEEe----
Confidence 568899999999999999999999999997653 433322 3478999999999999774 69999999986
Q ss_pred CcccceEeecccceEEc----CCCCChhhh-ccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc
Q psy2960 166 GTWRNYGKFNHDVLMKV----PKDIALTEI-SGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK 240 (405)
Q Consensus 166 G~~a~~~~v~~~~~~~i----P~~~s~~~A-a~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~ 240 (405)
++|++|+.++.+.++++ |+++++++| ++++++++|||+++...+++++|++|||+|++|++|++++|+|+..|++
T Consensus 86 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~ 165 (325)
T TIGR02825 86 PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCK 165 (325)
T ss_pred cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCE
Confidence 47999999999988887 999999997 7899999999999988899999999999999999999999999999999
Q ss_pred EEEEecCCcchHHHHHHHHHcCCcEEeChhh---HHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEEeccC
Q psy2960 241 TINIVRNRDDIDKLKSYLKSLGADYVFTEEE---LRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMS 316 (405)
Q Consensus 241 v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d---~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~~~ 316 (405)
+++++++. ++.+.++++|+++++++++ +.+ +...+ ++++|++|||+|++....++++++++|+++.+|...
T Consensus 166 Vi~~~~s~----~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~-~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~ 240 (325)
T TIGR02825 166 VVGAAGSD----EKVAYLKKLGFDVAFNYKTVKSLEETLKKAS-PDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAIS 240 (325)
T ss_pred EEEEeCCH----HHHHHHHHcCCCEEEeccccccHHHHHHHhC-CCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchh
Confidence 99888654 3478888999999998753 344 44444 568999999999988888999999999999998543
Q ss_pred CC----Ccc--cCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHHhh
Q psy2960 317 RE----PVQ--IPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMS 390 (405)
Q Consensus 317 ~~----~~~--~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~ 390 (405)
.. ... .....+..+++++.++....+.. +...+.++++++++++|++++.+..+|+++++++||+.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~- 314 (325)
T TIGR02825 241 TYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQG-----EVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGML- 314 (325)
T ss_pred hcccCCCCCCCcchHHHhhhcceEeEEEehhhhh-----hhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHHHHHh-
Confidence 21 111 11233456788888876543211 2335678899999999999988778899999999999999
Q ss_pred hcCCCCceEEEE
Q psy2960 391 IQGKSGVKYYID 402 (405)
Q Consensus 391 ~~~~~~gKvvl~ 402 (405)
+++..||+|++
T Consensus 315 -~~~~~gkvVv~ 325 (325)
T TIGR02825 315 -KGENLGKTIVK 325 (325)
T ss_pred -cCCCCCeEEeC
Confidence 88999999974
No 40
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.2e-42 Score=340.19 Aligned_cols=317 Identities=20% Similarity=0.296 Sum_probs=265.1
Q ss_pred CcccceeEEEEc--cCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCC----------CCCCCCCc
Q psy2960 68 GFSYLANKLVYN--QHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIK----------PTLPAVPG 135 (405)
Q Consensus 68 ~~~~~~~a~~~~--~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~----------~~~p~~lG 135 (405)
.+|.+||++++. ++|.+...+++++.|.|.++++||+|||.++|||++|++...|. +.. ...+.++|
T Consensus 8 ~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~-~~~~~~~~~~~~~~~~~~~~G 86 (393)
T cd08246 8 VVPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGE-PVSTFAARQRRGRDEPYHIGG 86 (393)
T ss_pred cCchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCC-CccccccccccCCCCCccccc
Confidence 378999999986 34555445889999999999999999999999999999988774 110 01235899
Q ss_pred cceEEEEEEEcCCCCCCCCCCEEEecCC---------------------------CCCcccceEeecccceEEcCCCCCh
Q psy2960 136 FEGVGEVVEVGSDVSSLAVGDHVIPDTQ---------------------------HLGTWRNYGKFNHDVLMKVPKDIAL 188 (405)
Q Consensus 136 ~E~~G~V~~vG~~v~~~~~GdrV~~~~~---------------------------~~G~~a~~~~v~~~~~~~iP~~~s~ 188 (405)
||++|+|+++|++++.+++||+|++.+. ..|+|++|+.++...++++|+++++
T Consensus 87 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~ 166 (393)
T cd08246 87 SDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSW 166 (393)
T ss_pred cceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCH
Confidence 9999999999999999999999998641 2489999999999999999999999
Q ss_pred hhhccCCCcHHHHHHHHHhh--cCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE
Q psy2960 189 TEISGITSNPCTAYRMLKDY--NSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV 266 (405)
Q Consensus 189 ~~Aa~~~~~~~ta~~al~~~--~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v 266 (405)
++++.+++++.|||+++... +++++|++|+|+|++|++|++++++|+++|++++++++++ ++++.++++|++++
T Consensus 167 ~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~----~~~~~~~~~G~~~~ 242 (393)
T cd08246 167 EEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSE----EKAEYCRALGAEGV 242 (393)
T ss_pred HHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCH----HHHHHHHHcCCCEE
Confidence 99999999999999998754 6889999999999999999999999999999998887543 45778889999998
Q ss_pred eChhh------------------------HHH-HhhhcCCC-CCcEEEECCCchhHHHHHHhcccCCEEEEEeccCCCCc
Q psy2960 267 FTEEE------------------------LRN-ISRDASIP-KPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPV 320 (405)
Q Consensus 267 ~~~~d------------------------~~~-i~~~t~g~-g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~ 320 (405)
++.++ +.+ +.+++++. ++|++|||+|+.....++++++++|+++.+|.......
T Consensus 243 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~ 322 (393)
T cd08246 243 INRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNH 322 (393)
T ss_pred EcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCC
Confidence 87521 334 77788877 89999999998877889999999999999986543333
Q ss_pred ccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHHhhhcC-CCCceE
Q psy2960 321 QIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQG-KSGVKY 399 (405)
Q Consensus 321 ~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~-~~~gKv 399 (405)
.++...++.++.++.+.+... .+.+.+++++++++.+.+.++++|+++++++||+.+. ++ +..||+
T Consensus 323 ~~~~~~l~~~~~~i~g~~~~~-----------~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~--~~~~~~gkv 389 (393)
T cd08246 323 TYDNRYLWMRQKRIQGSHFAN-----------DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMH--RNQHHVGNM 389 (393)
T ss_pred CCcHHHHhhheeEEEecccCc-----------HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHH--hCccccceE
Confidence 445555667888888876543 2346778899999999877889999999999999999 88 788999
Q ss_pred EEE
Q psy2960 400 YID 402 (405)
Q Consensus 400 vl~ 402 (405)
|+-
T Consensus 390 vv~ 392 (393)
T cd08246 390 AVL 392 (393)
T ss_pred EEe
Confidence 874
No 41
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=1.1e-42 Score=336.88 Aligned_cols=308 Identities=22% Similarity=0.310 Sum_probs=253.2
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCC-
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSS- 151 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~- 151 (405)
.|++++.++++. +++++.|.|.|+++||+|||.++++|++|++...|.++. ..+|.++|||++|+|+++|+++++
T Consensus 1 ~ka~~~~~~~~~---l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~ 76 (361)
T cd08231 1 ARAAVLTGPGKP---LEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR-VPLPIILGHEGVGRVVALGGGVTTD 76 (361)
T ss_pred CeEEEEcCCCCC---CEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC-CCCCcccccCCceEEEEeCCCcccc
Confidence 378999998854 899999999999999999999999999999999987653 357899999999999999999986
Q ss_pred -----CCCCCEEEecCC---------------------------------CCCcccceEeeccc-ceEEcCCCCChhhhc
Q psy2960 152 -----LAVGDHVIPDTQ---------------------------------HLGTWRNYGKFNHD-VLMKVPKDIALTEIS 192 (405)
Q Consensus 152 -----~~~GdrV~~~~~---------------------------------~~G~~a~~~~v~~~-~~~~iP~~~s~~~Aa 192 (405)
|++||+|++.+. ..|+|++|+.++++ .++++|+++++++|+
T Consensus 77 ~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa 156 (361)
T cd08231 77 VAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAA 156 (361)
T ss_pred ccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHH
Confidence 999999987621 25899999999996 799999999999999
Q ss_pred cCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHHcCCcEEeChhh
Q psy2960 193 GITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEEE 271 (405)
Q Consensus 193 ~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~-~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d 271 (405)
+++++++|||+++......++|++|||+|+ |++|++++|+|+.+|+ +++++++++ ++.+.++++|++.++++++
T Consensus 157 ~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~~~~----~~~~~~~~~g~~~vi~~~~ 231 (361)
T cd08231 157 PANCALATVLAALDRAGPVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVIDGSP----ERLELAREFGADATIDIDE 231 (361)
T ss_pred HhcCHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCH----HHHHHHHHcCCCeEEcCcc
Confidence 999999999999988777779999999985 9999999999999999 777776443 3467788999999987643
Q ss_pred -----HHH-HhhhcCCCCCcEEEECCCc-hhHHHHHHhcccCCEEEEEeccCC-CCcccCcccccccCeEEEEEecchhh
Q psy2960 272 -----LRN-ISRDASIPKPKLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSR-EPVQIPTSAFIFKDITLRGHWMTRWQ 343 (405)
Q Consensus 272 -----~~~-i~~~t~g~g~Dvvld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~k~~~~~g~~~~~~~ 343 (405)
+.. +.+.+++.++|++|||+|+ .....++++++++|+++.+|.... ....++...++.+++++.+++..+
T Consensus 232 ~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 309 (361)
T cd08231 232 LPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYD-- 309 (361)
T ss_pred cccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCC--
Confidence 123 7788888899999999987 456678999999999999996542 123344334577899999987543
Q ss_pred hhhccHHHHHHHHHHHHHHHHcC----cccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 344 KENKESAERKSMMNELTEMMRTG----KLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~g----~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
.+.++++++++.++ .+.+.++++|+++++++||+.+. ++. .+|+||++
T Consensus 310 ---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~--~~~-~~k~vi~~ 361 (361)
T cd08231 310 ---------PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAE--SGT-ALKVVIDP 361 (361)
T ss_pred ---------chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHH--cCC-ceEEEeCC
Confidence 12245566666665 34455788999999999999988 666 48999864
No 42
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-41 Score=326.06 Aligned_cols=324 Identities=22% Similarity=0.312 Sum_probs=272.1
Q ss_pred ceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCC
Q psy2960 72 LANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSS 151 (405)
Q Consensus 72 ~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~ 151 (405)
||||+++.+++.+ ..+.+.+.+.|++.++||+|||.++|+|+.|+....|.++.....|.++|||++|+|+++|+++++
T Consensus 1 ~m~a~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~ 79 (334)
T PTZ00354 1 MMRAVTLKGFGGV-DVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKR 79 (334)
T ss_pred CcEEEEEEecCCC-cceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCC
Confidence 6999999988865 347788888888999999999999999999999998876543455779999999999999999999
Q ss_pred CCCCCEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHH
Q psy2960 152 LAVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVI 231 (405)
Q Consensus 152 ~~~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~ai 231 (405)
+++||+|+++. .+|+|++|+.++.+.++++|+++++++++.+++++.|||+++...+.+++|++|||+|++|++|++++
T Consensus 80 ~~~Gd~V~~~~-~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~ 158 (334)
T PTZ00354 80 FKEGDRVMALL-PGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAA 158 (334)
T ss_pred CCCCCEEEEec-CCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHH
Confidence 99999999883 35899999999999999999999999999999999999999988889999999999999999999999
Q ss_pred HHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh---HHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCC
Q psy2960 232 QIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE---LRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKG 307 (405)
Q Consensus 232 qla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d---~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G 307 (405)
++|+.+|+++++++++. ++.+.++++|++++++..+ +.. +.+.+++.++|++|||+|++....++++++++|
T Consensus 159 ~~a~~~g~~v~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g 234 (334)
T PTZ00354 159 QLAEKYGAATIITTSSE----EKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDG 234 (334)
T ss_pred HHHHHcCCEEEEEeCCH----HHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhccCC
Confidence 99999999988876553 3467778899998887642 445 777887889999999999888888999999999
Q ss_pred EEEEEeccCCCCcc-cCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHH
Q psy2960 308 VMVTYGGMSREPVQ-IPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALM 386 (405)
Q Consensus 308 ~~v~~g~~~~~~~~-~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~ 386 (405)
+++.+|........ ++...++.++.++.++......... .+....+.+++++++++++.+.+.+.+.|++++++++|+
T Consensus 235 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 313 (334)
T PTZ00354 235 KWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEY-KADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHT 313 (334)
T ss_pred eEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhh-hHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHH
Confidence 99999854333322 4445556677788887654422111 123445667888999999999987889999999999999
Q ss_pred HHhhhcCCCCceEEEEec
Q psy2960 387 NTMSIQGKSGVKYYIDFR 404 (405)
Q Consensus 387 ~~~~~~~~~~gKvvl~~~ 404 (405)
.+. +++..+|+|++++
T Consensus 314 ~~~--~~~~~~kvvv~~~ 329 (334)
T PTZ00354 314 FLE--QNKNIGKVVLTVN 329 (334)
T ss_pred HHH--hCCCCceEEEecC
Confidence 998 7788899999875
No 43
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=1.5e-41 Score=323.94 Aligned_cols=316 Identities=20% Similarity=0.311 Sum_probs=260.7
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++++++++ +.+++++.|.|.++++||+||+.++|+|++|++...|.++....+|.++|||++|+|+++ +++.+
T Consensus 1 ~~a~~~~~~~~~-~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~ 77 (325)
T cd05280 1 FKALVVEEQDGG-VSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRF 77 (325)
T ss_pred CceEEEcccCCC-CcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCC
Confidence 799999998864 348999999999999999999999999999999999876544456889999999999998 56789
Q ss_pred CCCCEEEecC-----CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcC--CCC-CCEEEEeCCCc
Q psy2960 153 AVGDHVIPDT-----QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNS--LSP-GDVVIQNGANS 224 (405)
Q Consensus 153 ~~GdrV~~~~-----~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~--~~~-g~~VLI~ga~G 224 (405)
++||+|++.. ...|+|++|+.++.+.++++|+++++++|+.+++++.|||+++..... +++ +++|+|+|++|
T Consensus 78 ~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g 157 (325)
T cd05280 78 REGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATG 157 (325)
T ss_pred CCCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCcc
Confidence 9999999862 135899999999999999999999999999999999999999866443 353 57999999999
Q ss_pred HHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHH-HhhhcCCCCCcEEEECCCchhHHHHHHhc
Q psy2960 225 ACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKLALNCVGGNSATNLLRTL 303 (405)
Q Consensus 225 ~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l 303 (405)
++|++++|+|+.+|+++++++++. ++++.++++|++++++.++... +.+.+.++++|+||||+|++....+++++
T Consensus 158 ~vg~~~~~~a~~~g~~v~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l 233 (325)
T cd05280 158 GVGSIAVAILAKLGYTVVALTGKE----EQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGDVLANLLKQT 233 (325)
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchHHHHHHHHhh
Confidence 999999999999999998887654 3467778999999998765433 44444456799999999998888899999
Q ss_pred ccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHH
Q psy2960 304 VSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQE 383 (405)
Q Consensus 304 ~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~ 383 (405)
+++|+++.+|.....+..++...++.+++++.++...... ++...+.++.+.+++..+. .+.+..+|+++++++
T Consensus 234 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 307 (325)
T cd05280 234 KYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCP-----MELRKQVWQKLATEWKPDL-LEIVVREISLEELPE 307 (325)
T ss_pred cCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCc-----hhHHHHHHHHHHHHHhcCC-ccceeeEecHHHHHH
Confidence 9999999999654333344445555799999998765321 1233456777777777774 444788999999999
Q ss_pred HHHHHhhhcCCCCceEEEEe
Q psy2960 384 ALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 384 A~~~~~~~~~~~~gKvvl~~ 403 (405)
||+.+. ++++.||+|+++
T Consensus 308 a~~~~~--~~~~~gk~vv~~ 325 (325)
T cd05280 308 AIDRLL--AGKHRGRTVVKI 325 (325)
T ss_pred HHHHHh--cCCcceEEEEeC
Confidence 999999 889999999874
No 44
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=2.1e-41 Score=322.68 Aligned_cols=318 Identities=22% Similarity=0.259 Sum_probs=267.8
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCC--CCCCCCCCccceEEEEEEEcCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPI--KPTLPAVPGFEGVGEVVEVGSDVS 150 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~~lG~E~~G~V~~vG~~v~ 150 (405)
||++++++++.+ ..+.+.+.+.|.+.++||+|++.++++|++|++...|..+. ....|.++|||++|+|+++|++++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~ 79 (324)
T cd08244 1 MRAIRLHEFGPP-EVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVD 79 (324)
T ss_pred CeEEEEcCCCCc-cceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCC
Confidence 789999887764 44777888888889999999999999999999998886532 235678999999999999999999
Q ss_pred CCCCCCEEEecC-CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHH
Q psy2960 151 SLAVGDHVIPDT-QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQN 229 (405)
Q Consensus 151 ~~~~GdrV~~~~-~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~ 229 (405)
.+++||+|++.. ...|+|++|+.++...++++|++++++++++++++++||| ++...+.+++|++|+|+|++|++|++
T Consensus 80 ~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~ 158 (324)
T cd08244 80 PAWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSL 158 (324)
T ss_pred CCCCCCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHH
Confidence 999999999873 1258999999999999999999999999999999999995 55566899999999999999999999
Q ss_pred HHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccC
Q psy2960 230 VIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSK 306 (405)
Q Consensus 230 aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~ 306 (405)
++++|+.+|+++++++++++ +.+.++++|++.++++.+ +.+ +.+.++++++|+++||+|+.....++++++++
T Consensus 159 ~~~la~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~ 234 (324)
T cd08244 159 LVQLAKAAGATVVGAAGGPA----KTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPG 234 (324)
T ss_pred HHHHHHHCCCEEEEEeCCHH----HHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHHHhccC
Confidence 99999999999988875543 356778899998887653 444 77777778999999999998888889999999
Q ss_pred CEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHH
Q psy2960 307 GVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALM 386 (405)
Q Consensus 307 G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~ 386 (405)
|+++.+|.....+..++....+.+++++.++....+.. +...+.+++++++++++.+.+.++..|+++++++||+
T Consensus 235 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~ 309 (324)
T cd08244 235 GRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAER-----GGLRALEARALAEAAAGRLVPVVGQTFPLERAAEAHA 309 (324)
T ss_pred cEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCH-----HHHHHHHHHHHHHHHCCCccCccceEEeHHHHHHHHH
Confidence 99999996544333444445567899999887654321 3446778889999999999887889999999999999
Q ss_pred HHhhhcCCCCceEEEEe
Q psy2960 387 NTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 387 ~~~~~~~~~~gKvvl~~ 403 (405)
.+. +++..||+|+++
T Consensus 310 ~~~--~~~~~~kvv~~~ 324 (324)
T cd08244 310 ALE--ARSTVGKVLLLP 324 (324)
T ss_pred HHH--cCCCCceEEEeC
Confidence 999 889999999864
No 45
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=8.9e-42 Score=334.35 Aligned_cols=319 Identities=20% Similarity=0.290 Sum_probs=266.3
Q ss_pred cccceeEEEEcc--CCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCC---------CCCCC-CCCcc
Q psy2960 69 FSYLANKLVYNQ--HGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPI---------KPTLP-AVPGF 136 (405)
Q Consensus 69 ~~~~~~a~~~~~--~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---------~~~~p-~~lG~ 136 (405)
+|.+||+|++.. +++|.+.+++.+.|.|.|+++||+||+.++++|++|++...+.... ....| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 578899999965 7776667999999999999999999999999999999877664210 00123 37999
Q ss_pred ceEEEEEEEcCCCCCCCCCCEEEecCC---------------------------CCCcccceEeecccceEEcCCCCChh
Q psy2960 137 EGVGEVVEVGSDVSSLAVGDHVIPDTQ---------------------------HLGTWRNYGKFNHDVLMKVPKDIALT 189 (405)
Q Consensus 137 E~~G~V~~vG~~v~~~~~GdrV~~~~~---------------------------~~G~~a~~~~v~~~~~~~iP~~~s~~ 189 (405)
|++|+|+++|++++.+++||+|++... ..|+|++|+.++...++++|++++++
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~ 163 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWE 163 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHH
Confidence 999999999999999999999998631 25899999999999999999999999
Q ss_pred hhccCCCcHHHHHHHHHh--hcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe
Q psy2960 190 EISGITSNPCTAYRMLKD--YNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF 267 (405)
Q Consensus 190 ~Aa~~~~~~~ta~~al~~--~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~ 267 (405)
+++.+++++.|||+++.. .+++++|++|+|+|++|++|++++|+|+++|++++++++++ ++.+.++++|++.++
T Consensus 164 ~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~----~~~~~~~~~g~~~~v 239 (398)
T TIGR01751 164 EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSP----EKAEYCRELGAEAVI 239 (398)
T ss_pred HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCH----HHHHHHHHcCCCEEe
Confidence 999999999999999865 47889999999999999999999999999999988887543 346788889999998
Q ss_pred Chhh------------------------HHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEEeccCCCCccc
Q psy2960 268 TEEE------------------------LRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQI 322 (405)
Q Consensus 268 ~~~d------------------------~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 322 (405)
|.++ +.. +.+.++++++|++|||+|+..+..++++++++|+++.+|........+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 319 (398)
T TIGR01751 240 DRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHDY 319 (398)
T ss_pred cCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCCc
Confidence 7532 233 667777789999999999877788899999999999999765443444
Q ss_pred CcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 323 PTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 323 ~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
+...++.++.++.+..... .+.+++++++++++.+.+.++++|+++++++||+.+. +++..||+|++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~--~~~~~gkvvv~ 386 (398)
T TIGR01751 320 DNRYLWMRQKRIQGSHFAN-----------LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVH--RNHHQGNVAVL 386 (398)
T ss_pred CHHHHhhcccEEEccccCc-----------HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHH--cCCCCceEEEE
Confidence 4555566777777765432 1235778899999999988889999999999999999 88999999998
Q ss_pred ec
Q psy2960 403 FR 404 (405)
Q Consensus 403 ~~ 404 (405)
+.
T Consensus 387 ~~ 388 (398)
T TIGR01751 387 VL 388 (398)
T ss_pred eC
Confidence 75
No 46
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=1e-41 Score=326.46 Aligned_cols=302 Identities=22% Similarity=0.318 Sum_probs=255.7
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++++++.+ +++++.|.|+++++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++++
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~vG~~v~~~ 76 (333)
T cd08296 1 YKAVQVTEPGGP---LELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG-LSYPRVPGHEVVGRIDAVGEGVSRW 76 (333)
T ss_pred CeEEEEccCCCC---ceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC-CCCCcccCcceeEEEEEECCCCccC
Confidence 799999988544 889999999999999999999999999999999887653 2568899999999999999999999
Q ss_pred CCCCEEEecC---------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHH
Q psy2960 153 AVGDHVIPDT---------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRML 205 (405)
Q Consensus 153 ~~GdrV~~~~---------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al 205 (405)
++||+|++.+ ...|+|++|+.++...++++|+++++++++.++++++|||+++
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~ 156 (333)
T cd08296 77 KVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNAL 156 (333)
T ss_pred CCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence 9999998621 1258999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCC
Q psy2960 206 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIP 282 (405)
Q Consensus 206 ~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~ 282 (405)
.. .++++|++|||+| +|++|++++|+|+++|+++++++++. ++++.++++|+++++++.. +.. +++. .
T Consensus 157 ~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~----~~~~~~~~~g~~~~i~~~~~~~~~~~~~~---~ 227 (333)
T cd08296 157 RN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGS----DKADLARKLGAHHYIDTSKEDVAEALQEL---G 227 (333)
T ss_pred Hh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCCh----HHHHHHHHcCCcEEecCCCccHHHHHHhc---C
Confidence 76 4999999999999 69999999999999999988887543 3478888999999988653 444 5544 3
Q ss_pred CCcEEEECCC-chhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHH
Q psy2960 283 KPKLALNCVG-GNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTE 361 (405)
Q Consensus 283 g~Dvvld~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (405)
++|+++|++| +.....++++++++|+++.+|... ...+++...++.+++++.++.... .+.++.+++
T Consensus 228 ~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~~ 295 (333)
T cd08296 228 GAKLILATAPNAKAISALVGGLAPRGKLLILGAAG-EPVAVSPLQLIMGRKSIHGWPSGT-----------ALDSEDTLK 295 (333)
T ss_pred CCCEEEECCCchHHHHHHHHHcccCCEEEEEecCC-CCCCcCHHHHhhcccEEEEeCcCC-----------HHHHHHHHH
Confidence 7999999987 556677899999999999999654 234455556678999999987432 234667778
Q ss_pred HHHcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 362 MMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 362 ~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
+++++.+++. .++|+++++.+||+.+. +++..||+||+
T Consensus 296 ~~~~~~l~~~-v~~~~~~~~~~a~~~~~--~~~~~gk~v~~ 333 (333)
T cd08296 296 FSALHGVRPM-VETFPLEKANEAYDRMM--SGKARFRVVLT 333 (333)
T ss_pred HHHhCCCCce-EEEEEHHHHHHHHHHHH--CCCCceeEEeC
Confidence 8889998876 46899999999999999 88889999885
No 47
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=9.7e-42 Score=326.88 Aligned_cols=316 Identities=19% Similarity=0.308 Sum_probs=255.9
Q ss_pred eEEEEccC---CCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCC
Q psy2960 74 NKLVYNQH---GTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVS 150 (405)
Q Consensus 74 ~a~~~~~~---g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~ 150 (405)
|||++.++ +++ +.++..+.|.|+|+++||+|||.++++|+.|+..+.|..+. ..+|.++|+|++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~ 78 (336)
T TIGR02817 1 KAVGYKKPLPITDP-DALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPE-AGQPKILGWDAAGVVVAVGDEVT 78 (336)
T ss_pred CceeeccccCCCCc-ccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCC-CCCCcccceeeEEEEEEeCCCCC
Confidence 57888886 554 56888999999999999999999999999999988886543 35688999999999999999999
Q ss_pred CCCCCCEEEecC--CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCC-----CCEEEEeCCC
Q psy2960 151 SLAVGDHVIPDT--QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSP-----GDVVIQNGAN 223 (405)
Q Consensus 151 ~~~~GdrV~~~~--~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~-----g~~VLI~ga~ 223 (405)
.|++||+|+++. ...|+|++|+.++.+.++++|++++++++++++++++|||+++...+++++ |++|||+|++
T Consensus 79 ~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~ 158 (336)
T TIGR02817 79 LFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGA 158 (336)
T ss_pred CCCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCC
Confidence 999999999873 235899999999999999999999999999999999999999988888887 9999999999
Q ss_pred cHHHHHHHHHHHHc-CCcEEEEecCCcchHHHHHHHHHcCCcEEeCh-hhHHH-HhhhcCCCCCcEEEECCCc-hhHHHH
Q psy2960 224 SACGQNVIQIARHW-GLKTINIVRNRDDIDKLKSYLKSLGADYVFTE-EELRN-ISRDASIPKPKLALNCVGG-NSATNL 299 (405)
Q Consensus 224 G~vG~~aiqla~~~-G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~-~d~~~-i~~~t~g~g~Dvvld~~g~-~~~~~~ 299 (405)
|++|++++|+|+.+ |+++++++++++ +.+.++++|+++++++ .++.. +.+. .++++|+++||+++ .....+
T Consensus 159 g~vg~~~~~~ak~~~G~~vi~~~~~~~----~~~~l~~~g~~~~~~~~~~~~~~i~~~-~~~~vd~vl~~~~~~~~~~~~ 233 (336)
T TIGR02817 159 GGVGSILIQLARQLTGLTVIATASRPE----SQEWVLELGAHHVIDHSKPLKAQLEKL-GLEAVSYVFSLTHTDQHFKEI 233 (336)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCcHH----HHHHHHHcCCCEEEECCCCHHHHHHHh-cCCCCCEEEEcCCcHHHHHHH
Confidence 99999999999998 999999986643 4677788999999974 34545 6653 45689999999854 666788
Q ss_pred HHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecc-hhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceee--
Q psy2960 300 LRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMT-RWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFV-- 376 (405)
Q Consensus 300 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~-- 376 (405)
+++++++|+++.++.. ..++...+..+++++.+..+. ......+........++++++++.+|.+++.+.+.|
T Consensus 234 ~~~l~~~G~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~ 309 (336)
T TIGR02817 234 VELLAPQGRFALIDDP----AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGT 309 (336)
T ss_pred HHHhccCCEEEEEccc----ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCC
Confidence 9999999999988532 123333444466777765433 111111111112356889999999999998766665
Q ss_pred -ehhhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 377 -TLKNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 377 -~~~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
+++++++||+.+. +++..||+|++
T Consensus 310 ~~~~~~~~a~~~~~--~~~~~gkvvv~ 334 (336)
T TIGR02817 310 INAANLKRAHALIE--SGKARGKIVLE 334 (336)
T ss_pred CCHHHHHHHHHHHH--cCCccceEEEe
Confidence 4799999999999 88889999875
No 48
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=6e-42 Score=328.01 Aligned_cols=310 Identities=23% Similarity=0.320 Sum_probs=247.9
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCC-CCccceEEEEEEEcCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPA-VPGFEGVGEVVEVGSDVSS 151 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~-~lG~E~~G~V~~vG~~v~~ 151 (405)
|+++++..++.. .++++.+.|.+.++||+|||.++|||++|++.+.|..+.. ..|. ++|||++|+|+++| .++.
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~-~~~~~i~GHE~~G~V~evG-~~~~ 75 (350)
T COG1063 1 MKAAVVYVGGGD---VRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFV-PPGDIILGHEFVGEVVEVG-VVRG 75 (350)
T ss_pred CceeEEEecCCc---cccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCC-CCCCcccCccceEEEEEec-cccC
Confidence 667777776653 3377777777899999999999999999999999976653 3344 99999999999999 7788
Q ss_pred CCCCCEEEecC------------------C-------------CCCcccceEeecccceEE-cCCCCChhhhccCCCcHH
Q psy2960 152 LAVGDHVIPDT------------------Q-------------HLGTWRNYGKFNHDVLMK-VPKDIALTEISGITSNPC 199 (405)
Q Consensus 152 ~~~GdrV~~~~------------------~-------------~~G~~a~~~~v~~~~~~~-iP~~~s~~~Aa~~~~~~~ 199 (405)
+++||||+..+ . .+|+|+||+.+|.+++++ +||++ ..+++++..++.
T Consensus 76 ~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla 154 (350)
T COG1063 76 FKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLA 154 (350)
T ss_pred CCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhh
Confidence 99999999763 1 248999999999765555 58888 455555556899
Q ss_pred HHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHH-cCCcEEeChhh--HHH-H
Q psy2960 200 TAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADYVFTEEE--LRN-I 275 (405)
Q Consensus 200 ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~-lg~~~v~~~~d--~~~-i 275 (405)
++|++.......+++++|+|.|+ |++|++++++|+.+|+..++++ +..++|++++++ .|++.+++... ... +
T Consensus 155 ~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~---d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~ 230 (350)
T COG1063 155 TAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVV---DRSPERLELAKEAGGADVVVNPSEDDAGAEI 230 (350)
T ss_pred hhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEe---CCCHHHHHHHHHhCCCeEeecCccccHHHHH
Confidence 99887555566777779999999 9999999999999999888888 555788999999 77777776533 334 8
Q ss_pred hhhcCCCCCcEEEECCCchhH-HHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHH
Q psy2960 276 SRDASIPKPKLALNCVGGNSA-TNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKS 354 (405)
Q Consensus 276 ~~~t~g~g~Dvvld~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~ 354 (405)
.+.|++.|+|++|||+|.... ..++++++++|+++.+|........++...++.|++++.|++... ...
T Consensus 231 ~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~----------~~~ 300 (350)
T COG1063 231 LELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPS----------GRE 300 (350)
T ss_pred HHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCC----------Ccc
Confidence 888989999999999997654 578999999999999996544432566677888999999984311 134
Q ss_pred HHHHHHHHHHcCcccCC--cceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 355 MMNELTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 355 ~~~~~~~~~~~g~l~~~--~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
.++.+++++++|++.+. +++.++++++++||+.+.+ ......|++|++
T Consensus 301 ~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~-~~~~~~Kv~i~~ 350 (350)
T COG1063 301 DFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFAD-RKEEAIKVVLKP 350 (350)
T ss_pred cHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHh-cCCCeEEEEecC
Confidence 58889999999999875 6789999999999999983 233367999864
No 49
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=1.3e-41 Score=329.50 Aligned_cols=311 Identities=24% Similarity=0.340 Sum_probs=258.2
Q ss_pred cceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCC
Q psy2960 71 YLANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVS 150 (405)
Q Consensus 71 ~~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~ 150 (405)
++|||+++++++.+ +++++.|.|++.++||+|||.++|+|++|++...|.++. .+|.++|||++|+|+++|+++.
T Consensus 1 ~~~~a~~~~~~~~~---~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~~--~~p~v~G~e~~G~V~~vG~~v~ 75 (365)
T cd08278 1 MKTTAAVVREPGGP---FVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLPT--PLPAVLGHEGAGVVEAVGSAVT 75 (365)
T ss_pred CccEEeeeccCCCc---ceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCCC--CCCcccccceeEEEEEeCCCcc
Confidence 57999999997765 788999999999999999999999999999999987652 4688999999999999999999
Q ss_pred CCCCCCEEEecC------------------------------------------------CCCCcccceEeecccceEEc
Q psy2960 151 SLAVGDHVIPDT------------------------------------------------QHLGTWRNYGKFNHDVLMKV 182 (405)
Q Consensus 151 ~~~~GdrV~~~~------------------------------------------------~~~G~~a~~~~v~~~~~~~i 182 (405)
++++||+|++.. ...|+|++|+.+++.+++++
T Consensus 76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~i 155 (365)
T cd08278 76 GLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKV 155 (365)
T ss_pred cCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEEC
Confidence 999999999521 12488999999999999999
Q ss_pred CCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcC
Q psy2960 183 PKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLG 262 (405)
Q Consensus 183 P~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg 262 (405)
|+++++++++.+++++.||++++...+.+++|++|||+|+ |++|++++|+|+++|++++++++. .+.+.+.++++|
T Consensus 156 P~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~~~---~~~k~~~~~~~g 231 (365)
T cd08278 156 DKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVDI---VDSRLELAKELG 231 (365)
T ss_pred CCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC---CHHHHHHHHHcC
Confidence 9999999999999999999999988889999999999976 999999999999999975555533 234577888999
Q ss_pred CcEEeChhh--HHH-HhhhcCCCCCcEEEECCCc-hhHHHHHHhcccCCEEEEEeccC-CCCcccCcccccccCeEEEEE
Q psy2960 263 ADYVFTEEE--LRN-ISRDASIPKPKLALNCVGG-NSATNLLRTLVSKGVMVTYGGMS-REPVQIPTSAFIFKDITLRGH 337 (405)
Q Consensus 263 ~~~v~~~~d--~~~-i~~~t~g~g~Dvvld~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~k~~~~~g~ 337 (405)
++.++++++ +.+ +.+.+ +.++|+++||+|+ .....++++++++|+++.+|... .....++...++.+++++.++
T Consensus 232 ~~~~i~~~~~~~~~~v~~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (365)
T cd08278 232 ATHVINPKEEDLVAAIREIT-GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGV 310 (365)
T ss_pred CcEEecCCCcCHHHHHHHHh-CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEe
Confidence 999998653 445 77777 7789999999986 55678899999999999999643 223345555555789999988
Q ss_pred ecchhhhhhccHHHHHHHHHHHHHHHHcCcccC-CcceeeehhhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 338 WMTRWQKENKESAERKSMMNELTEMMRTGKLAA-PAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~-~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
..... ...+.++++++++++|++++ .+.+.|+++++++||+.+. +++. .|+||+
T Consensus 311 ~~~~~--------~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~--~~~~-~k~~~~ 365 (365)
T cd08278 311 IEGDS--------VPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSE--SGKV-IKPVLR 365 (365)
T ss_pred ecCCc--------ChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHH--CCCc-eEEEEC
Confidence 75431 11355788889999999865 3557899999999999988 6664 488874
No 50
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1.8e-41 Score=325.54 Aligned_cols=307 Identities=23% Similarity=0.311 Sum_probs=259.3
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCC--CCCCCCCCccceEEEEEEEcCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPI--KPTLPAVPGFEGVGEVVEVGSDVS 150 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~~lG~E~~G~V~~vG~~v~ 150 (405)
||++++++++++ +.+.+.|.|++.++||+||+.++++|++|++...|.++. ...+|.++|+|++|+|+++|+++.
T Consensus 1 ~ka~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~ 77 (340)
T cd05284 1 MKAARLYEYGKP---LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVD 77 (340)
T ss_pred CeeeEeccCCCC---ceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCC
Confidence 789999988765 888899999999999999999999999999999887652 345688999999999999999999
Q ss_pred CCCCCCEEEecCC--------------------------CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHH
Q psy2960 151 SLAVGDHVIPDTQ--------------------------HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRM 204 (405)
Q Consensus 151 ~~~~GdrV~~~~~--------------------------~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~a 204 (405)
.|++||+|++.+. ..|+|++|+.++.+.++++|+++++++++++++.++|||++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~ 157 (340)
T cd05284 78 GLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHA 157 (340)
T ss_pred cCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence 9999999997631 25899999999999999999999999999999999999999
Q ss_pred HHhh-cCCCCCCEEEEeCCCcHHHHHHHHHHHHcC-CcEEEEecCCcchHHHHHHHHHcCCcEEeChhh-HHH-HhhhcC
Q psy2960 205 LKDY-NSLSPGDVVIQNGANSACGQNVIQIARHWG-LKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE-LRN-ISRDAS 280 (405)
Q Consensus 205 l~~~-~~~~~g~~VLI~ga~G~vG~~aiqla~~~G-~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d-~~~-i~~~t~ 280 (405)
+... ..+.+|++|||+|+ |++|++++|+|+.+| +++++++++++ +.+.++++|+++++++++ +.. +.+.+.
T Consensus 158 l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~i~~~~~ 232 (340)
T cd05284 158 VKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEE----ALKLAERLGADHVLNASDDVVEEVRELTG 232 (340)
T ss_pred HHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHH----HHHHHHHhCCcEEEcCCccHHHHHHHHhC
Confidence 9875 46889999999996 679999999999999 79988876543 366778899999998654 444 777777
Q ss_pred CCCCcEEEECCCc-hhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHH
Q psy2960 281 IPKPKLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNEL 359 (405)
Q Consensus 281 g~g~Dvvld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 359 (405)
+.++|+++||+|+ .....++++++++|+++.+|.... ..++....+.+++++.++.... ...+..+
T Consensus 233 ~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 299 (340)
T cd05284 233 GRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH--GRLPTSDLVPTEISVIGSLWGT-----------RAELVEV 299 (340)
T ss_pred CCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC--CccCHHHhhhcceEEEEEeccc-----------HHHHHHH
Confidence 7889999999996 566778999999999999985432 2333334356899999876432 3457788
Q ss_pred HHHHHcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 360 TEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 360 ~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
++++++|.+++ +.+.|+++++++||+.+. +++..||+|+.+
T Consensus 300 ~~~l~~g~l~~-~~~~~~~~~~~~a~~~~~--~~~~~gkvv~~~ 340 (340)
T cd05284 300 VALAESGKVKV-EITKFPLEDANEALDRLR--EGRVTGRAVLVP 340 (340)
T ss_pred HHHHHhCCCCc-ceEEEeHHHHHHHHHHHH--cCCccceEEecC
Confidence 89999999886 567899999999999999 888999999864
No 51
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=1.8e-41 Score=323.78 Aligned_cols=320 Identities=22% Similarity=0.286 Sum_probs=262.9
Q ss_pred ceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCC
Q psy2960 72 LANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSS 151 (405)
Q Consensus 72 ~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~ 151 (405)
+||++.+.++|.+ ..+++++.|.|.|+++||+|||.++|+|++|++...|.++. +.+|.++|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~vG~~v~~ 78 (327)
T PRK10754 1 MAKRIEFHKHGGP-EVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP-PSLPSGLGTEAAGVVSKVGSGVKH 78 (327)
T ss_pred CceEEEEeccCCh-hHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC-CCCCCccCcceEEEEEEeCCCCCC
Confidence 5999999998876 56999999999999999999999999999999998887654 246889999999999999999999
Q ss_pred CCCCCEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHH
Q psy2960 152 LAVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVI 231 (405)
Q Consensus 152 ~~~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~ai 231 (405)
+++||+|++.....|+|++|+.++...++++|+++++++++.+++.++|||+++...+.+++|++|+|+|++|++|++++
T Consensus 79 ~~~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~ 158 (327)
T PRK10754 79 IKVGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIAC 158 (327)
T ss_pred CCCCCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHH
Confidence 99999998764456899999999999999999999999999999999999999988889999999999999999999999
Q ss_pred HHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChh--hHHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCE
Q psy2960 232 QIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGV 308 (405)
Q Consensus 232 qla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~--d~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~ 308 (405)
|+|+.+|++++++++++ .+++.++++|++++++.+ ++.+ +++.+++.++|+++||+|+.....++++++++|+
T Consensus 159 ~lak~~G~~v~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~ 234 (327)
T PRK10754 159 QWAKALGAKLIGTVGSA----QKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGL 234 (327)
T ss_pred HHHHHcCCEEEEEeCCH----HHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhccCCE
Confidence 99999999999887553 346777889999888764 3555 7888888899999999999888889999999999
Q ss_pred EEEEeccCCCCcccCcccccccCeEE-EEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCC--cceeeehhhHHHHH
Q psy2960 309 MVTYGGMSREPVQIPTSAFIFKDITL-RGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAP--AHKFVTLKNFQEAL 385 (405)
Q Consensus 309 ~v~~g~~~~~~~~~~~~~~~~k~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~~~~~~~A~ 385 (405)
++.+|........++...+..++..+ .......+.. .++...+.+..+++++.+|.+++. +.+.|+++++++||
T Consensus 235 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~ 311 (327)
T PRK10754 235 MVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYIT---TREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAH 311 (327)
T ss_pred EEEEccCCCCCCCcCHHHHhccCceEEecceeecccC---CHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHH
Confidence 99998654221222222222122111 1111111111 124455667889999999999854 57899999999999
Q ss_pred HHHhhhcCCCCceEEEE
Q psy2960 386 MNTMSIQGKSGVKYYID 402 (405)
Q Consensus 386 ~~~~~~~~~~~gKvvl~ 402 (405)
+.+. +++..+|+||.
T Consensus 312 ~~~~--~~~~~~~~~~~ 326 (327)
T PRK10754 312 EILE--SRATQGSSLLI 326 (327)
T ss_pred HHHH--cCCCcceEEEe
Confidence 9999 88999999986
No 52
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.8e-41 Score=326.84 Aligned_cols=310 Identities=23% Similarity=0.361 Sum_probs=258.8
Q ss_pred eeEEEEccCCCCccceEeee-ecCCCCCCCeEEEEEEEeecChhhhhhhcccCCC-------------------CCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVEN-ETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPI-------------------KPTLPA 132 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~-~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-------------------~~~~p~ 132 (405)
||++++.+++.+ ..+.+.+ .+.|.+.+++|+|||.++++|++|++...|.++. ...+|.
T Consensus 1 ~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 79 (350)
T cd08274 1 MRAVLLTGHGGL-DKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPR 79 (350)
T ss_pred CeEEEEeccCCc-cceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCc
Confidence 688888877654 3355654 5778889999999999999999999988876531 235688
Q ss_pred CCccceEEEEEEEcCCCCCCCCCCEEEecC------------------CCCCcccceEeecccceEEcCCCCChhhhccC
Q psy2960 133 VPGFEGVGEVVEVGSDVSSLAVGDHVIPDT------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGI 194 (405)
Q Consensus 133 ~lG~E~~G~V~~vG~~v~~~~~GdrV~~~~------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~ 194 (405)
++|||++|+|+++|+++++|++||||++.+ ...|++++|+.++...++++|+++++++++++
T Consensus 80 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l 159 (350)
T cd08274 80 IQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATF 159 (350)
T ss_pred ccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhc
Confidence 999999999999999999999999999841 12489999999999999999999999999999
Q ss_pred CCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--H
Q psy2960 195 TSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--L 272 (405)
Q Consensus 195 ~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~ 272 (405)
++++.|||+++ ..+++++|++|||+|++|++|++++|+|+++|+++++++++. +++.++++|++.+++..+ .
T Consensus 160 ~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-----~~~~~~~~g~~~~~~~~~~~~ 233 (350)
T cd08274 160 PCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-----KEEAVRALGADTVILRDAPLL 233 (350)
T ss_pred ccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-----hhHHHHhcCCeEEEeCCCccH
Confidence 99999999998 558999999999999999999999999999999998887442 367778899987665432 2
Q ss_pred HHHhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHH
Q psy2960 273 RNISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAER 352 (405)
Q Consensus 273 ~~i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~ 352 (405)
.+ .+.+.+.++|++|||+|++....++++++++|+++.+|........++...++.+++++.++....
T Consensus 234 ~~-~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 301 (350)
T cd08274 234 AD-AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGT----------- 301 (350)
T ss_pred HH-HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCC-----------
Confidence 22 445667889999999999888889999999999999985533223455555677899999887532
Q ss_pred HHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 353 KSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 353 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
.+.+.++++++.++++++.++++|+++++++||+.+. .+...+|+|+++
T Consensus 302 ~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~--~~~~~~kvvi~~ 350 (350)
T cd08274 302 REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFL--EKRHVGKLVLVP 350 (350)
T ss_pred HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHh--cCCCceEEEEeC
Confidence 3457888999999999888889999999999999999 788899999864
No 53
>KOG1198|consensus
Probab=100.00 E-value=1.6e-41 Score=321.02 Aligned_cols=323 Identities=21% Similarity=0.287 Sum_probs=250.0
Q ss_pred ceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCC---CCCCCCccceEEE---EEEE
Q psy2960 72 LANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKP---TLPAVPGFEGVGE---VVEV 145 (405)
Q Consensus 72 ~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~---~~p~~lG~E~~G~---V~~v 145 (405)
+++.+.+..+.++...+..++.|+|.|.++|++|++.++++|+.|+++..|.+...+ .+|.+++.+++|+ +...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~ 83 (347)
T KOG1198|consen 4 KIRRVSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESV 83 (347)
T ss_pred ccceEEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEecc
Confidence 344455544444435577789999999999999999999999999999999877655 6786666655554 4555
Q ss_pred c-CCCCCCCCCCEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhc------CCCCCCEEE
Q psy2960 146 G-SDVSSLAVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYN------SLSPGDVVI 218 (405)
Q Consensus 146 G-~~v~~~~~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~------~~~~g~~VL 218 (405)
| ..+..+..||++... ...|+|+||++++...++++|+++++++||++|.+++|||.++...+ +.++|++||
T Consensus 84 g~~~~~~~~~g~~~~~~-~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vL 162 (347)
T KOG1198|consen 84 GDDVVGGWVHGDAVVAF-LSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVL 162 (347)
T ss_pred ccccccceEeeeEEeec-cCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEE
Confidence 5 345568888888877 45799999999999999999999999999999999999999999988 899999999
Q ss_pred EeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCCCCcEEEECCCchh
Q psy2960 219 QNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIPKPKLALNCVGGNS 295 (405)
Q Consensus 219 I~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~g~Dvvld~~g~~~ 295 (405)
|+||+|+||++++|+|++.|+.+++++++.+. .++++++|+|+++|+++ ..+ +++.| +.++|+||||+|+..
T Consensus 163 v~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~----~~l~k~lGAd~vvdy~~~~~~e~~kk~~-~~~~DvVlD~vg~~~ 237 (347)
T KOG1198|consen 163 VLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK----LELVKKLGADEVVDYKDENVVELIKKYT-GKGVDVVLDCVGGST 237 (347)
T ss_pred EEeCCcHHHHHHHHHHHhcCCcEEEEEcccch----HHHHHHcCCcEeecCCCHHHHHHHHhhc-CCCccEEEECCCCCc
Confidence 99999999999999999999666666666554 78999999999999877 455 77777 889999999999988
Q ss_pred HHHHHHhcccCCEEEEEeccCCCCcccCcc----cccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCC
Q psy2960 296 ATNLLRTLVSKGVMVTYGGMSREPVQIPTS----AFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAP 371 (405)
Q Consensus 296 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ 371 (405)
...++.++..+|+...++.......+.+.. .+........+.+..++..... ....+.++.+.++++.|+|+|.
T Consensus 238 ~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~l~~~ie~gkikp~ 315 (347)
T KOG1198|consen 238 LTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYF--VPSAEYLKALVELIEKGKIKPV 315 (347)
T ss_pred cccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeee--cCCHHHHHHHHHHHHcCcccCC
Confidence 888889999888765555332211111111 0000011111111111111111 2235678999999999999999
Q ss_pred cceeeehhhHHHHHHHHhhhcCCCCceEEEEec
Q psy2960 372 AHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 404 (405)
Q Consensus 372 ~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~~ 404 (405)
+.+.||++++.+||+.+. +....||+++.+.
T Consensus 316 i~~~~p~~~~~ea~~~~~--~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 316 IDSVYPFSQAKEAFEKLE--KSHATGKVVLEKD 346 (347)
T ss_pred cceeeeHHHHHHHHHHHh--hcCCcceEEEEec
Confidence 999999999999999999 8899999999874
No 54
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=9.5e-41 Score=318.06 Aligned_cols=308 Identities=42% Similarity=0.669 Sum_probs=264.9
Q ss_pred ceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCCCCCCEEEecCCCCC
Q psy2960 87 VVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSLAVGDHVIPDTQHLG 166 (405)
Q Consensus 87 ~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~G 166 (405)
.+++++.|.|.+.+++|+|||.++++|+.|...+.|.++..+.+|.++|||++|+|+.+|++++.+++||+|++.+ ..|
T Consensus 13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~-~~g 91 (323)
T cd05282 13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG-GEG 91 (323)
T ss_pred eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC-CCC
Confidence 5888899999999999999999999999999998887654445688999999999999999999999999999983 258
Q ss_pred cccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEec
Q psy2960 167 TWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVR 246 (405)
Q Consensus 167 ~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~ 246 (405)
+|++|+.++...++++|+++++++++.+++.++|||+++...+.+.+|++|||+|++|++|++++|+|+.+|++++++++
T Consensus 92 ~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~ 171 (323)
T cd05282 92 TWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVR 171 (323)
T ss_pred cceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEec
Confidence 99999999999999999999999999999999999999988888999999999999999999999999999999999887
Q ss_pred CCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEEeccCCCCcccC
Q psy2960 247 NRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIP 323 (405)
Q Consensus 247 ~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 323 (405)
+.+ +.+.++++|+++++++++ +.. +.+.+.+.++|++|||+|+.....++++++++|+++.+|........++
T Consensus 172 ~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~ 247 (323)
T cd05282 172 RDE----QVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGEPVPFP 247 (323)
T ss_pred ChH----HHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCCCCCCC
Confidence 654 356778899999998753 444 7788888899999999999888888999999999999986543333444
Q ss_pred cccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 324 TSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 324 ~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
...+..+++++.++....+... ..|....+.++++++++++|.+.+.+++.|+++++++||+.+. .++..+|+|++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~--~~~~~~kvv~~ 323 (323)
T cd05282 248 RSVFIFKDITVRGFWLRQWLHS-ATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAE--QPGRGGKVLLT 323 (323)
T ss_pred HHHHhhcCceEEEEEehHhhcc-CCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHh--cCCCCceEeeC
Confidence 4444448999999887665432 0235667789999999999999887889999999999999999 78888999874
No 55
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=1.8e-40 Score=316.36 Aligned_cols=314 Identities=24% Similarity=0.349 Sum_probs=258.3
Q ss_pred eEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCCC
Q psy2960 74 NKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSLA 153 (405)
Q Consensus 74 ~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~ 153 (405)
||+++...+.| +.+++++.|.|.++++||+||+.++++|++|++.+.|.++....+|.++|||++|+|+. +++..|+
T Consensus 1 ~a~~~~~~~~~-~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 77 (323)
T TIGR02823 1 KALVVEKEDGK-VSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFR 77 (323)
T ss_pred CeEEEccCCCC-cceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCC
Confidence 67888887776 56899999999999999999999999999999999887654335688999999999988 6678899
Q ss_pred CCCEEEecCC-----CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhh--cCCCCCC-EEEEeCCCcH
Q psy2960 154 VGDHVIPDTQ-----HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDY--NSLSPGD-VVIQNGANSA 225 (405)
Q Consensus 154 ~GdrV~~~~~-----~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~--~~~~~g~-~VLI~ga~G~ 225 (405)
+||+|++... ..|++++|+.++.+.++++|+++++++++++++.+.||++++... +++.+|+ +|+|+|++|+
T Consensus 78 ~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~ 157 (323)
T TIGR02823 78 EGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGG 157 (323)
T ss_pred CCCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcH
Confidence 9999998731 258999999999999999999999999999999999999887543 3488999 9999999999
Q ss_pred HHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcc
Q psy2960 226 CGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKLALNCVGGNSATNLLRTLV 304 (405)
Q Consensus 226 vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~ 304 (405)
+|++++|+|+++|+++++++++.+ +.+.++++|++++++.++... +...+.+ ++|+++||+|++....++++++
T Consensus 158 vg~~~~~la~~~G~~vi~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~ 232 (323)
T TIGR02823 158 VGSLAVAILSKLGYEVVASTGKAE----EEDYLKELGASEVIDREDLSPPGKPLEKE-RWAGAVDTVGGHTLANVLAQLK 232 (323)
T ss_pred HHHHHHHHHHHcCCeEEEEeCCHH----HHHHHHhcCCcEEEccccHHHHHHHhcCC-CceEEEECccHHHHHHHHHHhC
Confidence 999999999999999998886643 347778999999998765443 4445443 5999999999988888899999
Q ss_pred cCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHH
Q psy2960 305 SKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEA 384 (405)
Q Consensus 305 ~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A 384 (405)
++|+++.+|.........+...++.+++++.+++...... ....+.++.+.+++..+.+.+. .+.|+++++++|
T Consensus 233 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~a 306 (323)
T TIGR02823 233 YGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPM-----ALREAAWQRLATDLKPRNLESI-TREITLEELPEA 306 (323)
T ss_pred CCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCc-----hhHHHHHHHHHHHhhcCCCcCc-eeeecHHHHHHH
Confidence 9999999996533333333345557899999976542111 2334567778888888888764 568999999999
Q ss_pred HHHHhhhcCCCCceEEEEe
Q psy2960 385 LMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 385 ~~~~~~~~~~~~gKvvl~~ 403 (405)
|+.+. +++..+|+|+++
T Consensus 307 ~~~~~--~~~~~~k~vv~~ 323 (323)
T TIGR02823 307 LEQIL--AGQHRGRTVVDV 323 (323)
T ss_pred HHHHh--CCCccceEEEeC
Confidence 99999 889999999864
No 56
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.1e-40 Score=319.62 Aligned_cols=309 Identities=20% Similarity=0.252 Sum_probs=249.2
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++.+++. +.+++.|.|.+.++||+|||.++++|++|++...|.++. ..+|.++|||++|+|+++|++++++
T Consensus 1 mka~~~~~~~~----~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~-~~~~~~~G~e~~G~V~~vG~~v~~~ 75 (351)
T cd08285 1 MKAFAMLGIGK----VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG-ERHGMILGHEAVGVVEEVGSEVKDF 75 (351)
T ss_pred CceEEEccCCc----cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC-CCCCcccCcceEEEEEEecCCcCcc
Confidence 79999999875 778999999999999999999999999999988876543 3568999999999999999999999
Q ss_pred CCCCEEEecCC-----------------------------CCCcccceEeeccc--ceEEcCCCCChhhhccCCCcHHHH
Q psy2960 153 AVGDHVIPDTQ-----------------------------HLGTWRNYGKFNHD--VLMKVPKDIALTEISGITSNPCTA 201 (405)
Q Consensus 153 ~~GdrV~~~~~-----------------------------~~G~~a~~~~v~~~--~~~~iP~~~s~~~Aa~~~~~~~ta 201 (405)
++||+|++.+. ..|+|+||+.++.+ .++++|+++++++++.++..+.||
T Consensus 76 ~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta 155 (351)
T cd08285 76 KPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTG 155 (351)
T ss_pred CCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhH
Confidence 99999997421 25899999999974 899999999999999999999999
Q ss_pred HHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChh--hHHH-Hhhh
Q psy2960 202 YRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRD 278 (405)
Q Consensus 202 ~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~--d~~~-i~~~ 278 (405)
|+++ ..+.+++|++|||+|+ |++|++++|+|+.+|+.+++++++. +++.+.++++|++++++++ ++.. +.+.
T Consensus 156 ~~~~-~~~~~~~g~~vlI~g~-g~iG~~~~~lak~~G~~~v~~~~~~---~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~ 230 (351)
T cd08285 156 FHGA-ELANIKLGDTVAVFGI-GPVGLMAVAGARLRGAGRIIAVGSR---PNRVELAKEYGATDIVDYKNGDVVEQILKL 230 (351)
T ss_pred HHHH-HccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC---HHHHHHHHHcCCceEecCCCCCHHHHHHHH
Confidence 9996 5589999999999975 9999999999999999755444332 3457888899999999865 3444 7777
Q ss_pred cCCCCCcEEEECCCch-hHHHHHHhcccCCEEEEEeccCCC-CcccCc--ccccccCeEEEEEecchhhhhhccHHHHHH
Q psy2960 279 ASIPKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSRE-PVQIPT--SAFIFKDITLRGHWMTRWQKENKESAERKS 354 (405)
Q Consensus 279 t~g~g~Dvvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~--~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~ 354 (405)
+.+.++|+++||+|+. ....++++++++|+++.+|..... ...++. .....+..++.+.+... ..+
T Consensus 231 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------~~~ 300 (351)
T cd08285 231 TGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPG----------GRL 300 (351)
T ss_pred hCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCC----------ccc
Confidence 7778899999999975 556789999999999999865432 122221 11223455565543211 124
Q ss_pred HHHHHHHHHHcCcccC---CcceeeehhhHHHHHHHHhhhcCC-CCceEEEEe
Q psy2960 355 MMNELTEMMRTGKLAA---PAHKFVTLKNFQEALMNTMSIQGK-SGVKYYIDF 403 (405)
Q Consensus 355 ~~~~~~~~~~~g~l~~---~~~~~~~~~~~~~A~~~~~~~~~~-~~gKvvl~~ 403 (405)
.++++++++++|++++ ...++|+++++++||+.+. +++ ..+|++|++
T Consensus 301 ~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~--~~~~~~~k~~~~~ 351 (351)
T cd08285 301 RMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMK--DKPDDLIKPVIIF 351 (351)
T ss_pred cHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHh--cccCCeEEEEEeC
Confidence 5788899999999998 2345699999999999998 665 468999874
No 57
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=2.8e-40 Score=315.42 Aligned_cols=316 Identities=24% Similarity=0.317 Sum_probs=249.8
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||||+++++|++ ..+.+++.|.|.|.++||+||+.++++|++|.....+.......+|.++|||++|+|++. ++.++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~--~~~~~ 77 (326)
T cd08289 1 FQALVVEKDEDD-VSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVES--NDPRF 77 (326)
T ss_pred CeeEEEeccCCc-ceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEc--CCCCC
Confidence 799999998875 468889999999999999999999999999987765322112245889999999999995 45789
Q ss_pred CCCCEEEecCC-----CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhc--C-CCCCCEEEEeCCCc
Q psy2960 153 AVGDHVIPDTQ-----HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYN--S-LSPGDVVIQNGANS 224 (405)
Q Consensus 153 ~~GdrV~~~~~-----~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~--~-~~~g~~VLI~ga~G 224 (405)
++||+|++... ..|+|++|+.++.+.++++|+++++++++.+++++.||++++.... . ...|++|||+|++|
T Consensus 78 ~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g 157 (326)
T cd08289 78 KPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATG 157 (326)
T ss_pred CCCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCc
Confidence 99999998731 3699999999999999999999999999999999999999886432 3 33578999999999
Q ss_pred HHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhH-HH-HhhhcCCCCCcEEEECCCchhHHHHHHh
Q psy2960 225 ACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEEL-RN-ISRDASIPKPKLALNCVGGNSATNLLRT 302 (405)
Q Consensus 225 ~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~-~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~ 302 (405)
++|++++|+|+.+|+++++++++++ +.+.++++|++++++.++. .+ +.+.+ +.++|++|||+|+.....++++
T Consensus 158 ~vg~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~v~~~~~~~~~~~~~~~-~~~~d~vld~~g~~~~~~~~~~ 232 (326)
T cd08289 158 GVGSLAVSILAKLGYEVVASTGKAD----AADYLKKLGAKEVIPREELQEESIKPLE-KQRWAGAVDPVGGKTLAYLLST 232 (326)
T ss_pred hHHHHHHHHHHHCCCeEEEEecCHH----HHHHHHHcCCCEEEcchhHHHHHHHhhc-cCCcCEEEECCcHHHHHHHHHH
Confidence 9999999999999999998886643 4677789999999987653 33 55553 5689999999999888889999
Q ss_pred cccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHH
Q psy2960 303 LVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQ 382 (405)
Q Consensus 303 l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~ 382 (405)
++++|+++.+|.......+.+...++.+++++.+++...... ....+.+..+.+.+..+.+...++++|++++++
T Consensus 233 l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 307 (326)
T cd08289 233 LQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPM-----ELRRRIWRRLATDLKPTQLLNEIKQEITLDELP 307 (326)
T ss_pred hhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCc-----hHHHHHHHHHHhhcCccccccccceEeeHHHHH
Confidence 999999999996533333333455667899999986432100 112234444444443333334468999999999
Q ss_pred HHHHHHhhhcCCCCceEEEEe
Q psy2960 383 EALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 383 ~A~~~~~~~~~~~~gKvvl~~ 403 (405)
+||+.+. +++..||+|+++
T Consensus 308 ~a~~~~~--~~~~~gkvvv~~ 326 (326)
T cd08289 308 EALKQIL--QGRVTGRTVVKL 326 (326)
T ss_pred HHHHHHh--cCcccceEEEeC
Confidence 9999999 889999999874
No 58
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=3.9e-40 Score=316.47 Aligned_cols=310 Identities=25% Similarity=0.356 Sum_probs=261.5
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++.+++. ..+++.+.|.|.|.++|++||+.++++|++|+....|.++.....|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~--~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~ 78 (341)
T cd08297 1 MKAAVVEEFGE--KPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGL 78 (341)
T ss_pred CceEEeeccCC--CCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCC
Confidence 78999998871 3488999999999999999999999999999999888765444567789999999999999999999
Q ss_pred CCCCEEEecC---------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHH
Q psy2960 153 AVGDHVIPDT---------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRML 205 (405)
Q Consensus 153 ~~GdrV~~~~---------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al 205 (405)
++||+|+..+ ...|++++|+.++.+.++++|++++++++++++..+.|||+++
T Consensus 79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~ 158 (341)
T cd08297 79 KVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKAL 158 (341)
T ss_pred CCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHH
Confidence 9999998742 0258999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCC
Q psy2960 206 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIP 282 (405)
Q Consensus 206 ~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~ 282 (405)
.. .++++|++|||+|+++++|++++++|+++|+++++++++++ +.+.++++|+++++++++ +.. +.+.++++
T Consensus 159 ~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~ 233 (341)
T cd08297 159 KK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDE----KLELAKELGADAFVDFKKSDDVEAVKELTGGG 233 (341)
T ss_pred Hh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHH----HHHHHHHcCCcEEEcCCCccHHHHHHHHhcCC
Confidence 77 58999999999999888999999999999999999986643 356778899999988653 445 77788788
Q ss_pred CCcEEEECCCc-hhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHH
Q psy2960 283 KPKLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTE 361 (405)
Q Consensus 283 g~Dvvld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (405)
++|+++||.++ .....++++++++|+++.+|.......+++...+..+++++.+..... .+.++.+++
T Consensus 234 ~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 302 (341)
T cd08297 234 GAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGT-----------RQDLQEALE 302 (341)
T ss_pred CCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCC-----------HHHHHHHHH
Confidence 99999996664 556678999999999999985543222444444557888988865432 345788889
Q ss_pred HHHcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 362 MMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 362 ~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
+++++.+++. .+.|+++++++||+.+. .+.+.||+|+++
T Consensus 303 ~~~~~~l~~~-~~~~~~~~~~~a~~~~~--~~~~~gkvvi~~ 341 (341)
T cd08297 303 FAARGKVKPH-IQVVPLEDLNEVFEKME--EGKIAGRVVVDF 341 (341)
T ss_pred HHHcCCCcce-eEEEcHHHHHHHHHHHH--cCCccceEEEeC
Confidence 9999999864 47899999999999999 889999999875
No 59
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=3e-40 Score=320.38 Aligned_cols=308 Identities=23% Similarity=0.347 Sum_probs=259.0
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCC-
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSS- 151 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~- 151 (405)
||+|++.+++.+ +.+.+.|.|.++++||+||+.++++|++|+....|.++. .+|.++|||++|+|+.+|+++++
T Consensus 1 ~~a~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~--~~p~~~g~e~~G~v~~vG~~~~~~ 75 (367)
T cd08263 1 MKAAVLKGPNPP---LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF--PPPFVLGHEISGEVVEVGPNVENP 75 (367)
T ss_pred CeeEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC--CCCcccccccceEEEEeCCCCCCC
Confidence 789999988754 788999999999999999999999999999999887754 56889999999999999999988
Q ss_pred --CCCCCEEEecC------------------------------------------------CCCCcccceEeecccceEE
Q psy2960 152 --LAVGDHVIPDT------------------------------------------------QHLGTWRNYGKFNHDVLMK 181 (405)
Q Consensus 152 --~~~GdrV~~~~------------------------------------------------~~~G~~a~~~~v~~~~~~~ 181 (405)
|++||+|++.+ ...|+|++|+.++...+++
T Consensus 76 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 155 (367)
T cd08263 76 YGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAP 155 (367)
T ss_pred CcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEE
Confidence 99999999831 1258999999999999999
Q ss_pred cCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHH
Q psy2960 182 VPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKS 260 (405)
Q Consensus 182 iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~~~~ 260 (405)
+|++++++++++++++++|||+++...+.+++|++|||+| +|++|++++++|+.+|++ ++++.+++ .+.+.+++
T Consensus 156 ~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~----~~~~~~~~ 230 (367)
T cd08263 156 LPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRD----EKLAKAKE 230 (367)
T ss_pred CCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCH----HHHHHHHH
Confidence 9999999999999999999999998888889999999996 599999999999999999 66665443 34577788
Q ss_pred cCCcEEeChhh--HHH-HhhhcCCCCCcEEEECCCch-hHHHHHHhcccCCEEEEEeccCCC-CcccCcccccccCeEEE
Q psy2960 261 LGADYVFTEEE--LRN-ISRDASIPKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSRE-PVQIPTSAFIFKDITLR 335 (405)
Q Consensus 261 lg~~~v~~~~d--~~~-i~~~t~g~g~Dvvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~k~~~~~ 335 (405)
+|++.++++++ +.. +.+.+.+.++|++|||+++. ....++++++++|+++.+|..... ...++...++.+++++.
T Consensus 231 ~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 310 (367)
T cd08263 231 LGATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKII 310 (367)
T ss_pred hCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEE
Confidence 99999998653 444 77777778899999999997 777889999999999999854321 22344444446888888
Q ss_pred EEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCC--cceeeehhhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 336 GHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 336 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
+++... ..+.+++++++++++.+++. +++.|+++++.+||+.+. ++++.||+||+
T Consensus 311 ~~~~~~----------~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~--~~~~~g~~~~~ 367 (367)
T cd08263 311 GSYGAR----------PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLR--KGLIHGRAIVE 367 (367)
T ss_pred ecCCCC----------cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHh--cCCccceeeeC
Confidence 753221 13467888999999999874 578899999999999999 88889999974
No 60
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.6e-40 Score=310.33 Aligned_cols=303 Identities=21% Similarity=0.280 Sum_probs=254.5
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++++.+ | ..+++++.|.|.++++||+||+.++++|+.|++...+. ..|.++|||++|+|+++|++++.|
T Consensus 1 ~~~~~~~~~~-~-~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~-----~~~~~~g~e~~G~v~~~G~~v~~~ 73 (305)
T cd08270 1 MRALVVDPDA-P-LRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER-----PDGAVPGWDAAGVVERAAADGSGP 73 (305)
T ss_pred CeEEEEccCC-C-ceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC-----CCCCcccceeEEEEEEeCCCCCCC
Confidence 6899998865 4 45888899999999999999999999999999876632 236789999999999999999999
Q ss_pred CCCCEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHH
Q psy2960 153 AVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQ 232 (405)
Q Consensus 153 ~~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiq 232 (405)
++||+|+++. ..|+|++|+.++.+.++++|+++++++++++++.+.|||+++...... +|++|+|+|++|++|+++++
T Consensus 74 ~~Gd~V~~~~-~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~ 151 (305)
T cd08270 74 AVGARVVGLG-AMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQ 151 (305)
T ss_pred CCCCEEEEec-CCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHH
Confidence 9999999883 369999999999999999999999999999999999999999876555 69999999999999999999
Q ss_pred HHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEE
Q psy2960 233 IARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTY 312 (405)
Q Consensus 233 la~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~ 312 (405)
+|+.+|++++.++++. ++.+.++++|++.+++..+ +.+ .+++|+++||+|+.....++++++++|+++.+
T Consensus 152 ~a~~~g~~v~~~~~~~----~~~~~~~~~g~~~~~~~~~-----~~~-~~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~ 221 (305)
T cd08270 152 LAALAGAHVVAVVGSP----ARAEGLRELGAAEVVVGGS-----ELS-GAPVDLVVDSVGGPQLARALELLAPGGTVVSV 221 (305)
T ss_pred HHHHcCCEEEEEeCCH----HHHHHHHHcCCcEEEeccc-----ccc-CCCceEEEECCCcHHHHHHHHHhcCCCEEEEE
Confidence 9999999999987553 3477888899876654321 112 24799999999998888899999999999999
Q ss_pred eccCCCCcccCcccccc--cCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHHhh
Q psy2960 313 GGMSREPVQIPTSAFIF--KDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMS 390 (405)
Q Consensus 313 g~~~~~~~~~~~~~~~~--k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~ 390 (405)
|........++...+.. ++.++.++++.. +....+.++.+.+++++|++++.+.++++++++++||+.+.
T Consensus 222 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~- 293 (305)
T cd08270 222 GSSSGEPAVFNPAAFVGGGGGRRLYTFFLYD-------GEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEALL- 293 (305)
T ss_pred eccCCCcccccHHHHhcccccceEEEEEccC-------HHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHHHHHHH-
Confidence 96543333344444443 689999888654 13345678889999999999987888999999999999999
Q ss_pred hcCCCCceEEEEe
Q psy2960 391 IQGKSGVKYYIDF 403 (405)
Q Consensus 391 ~~~~~~gKvvl~~ 403 (405)
++...||+|+++
T Consensus 294 -~~~~~gkvvi~~ 305 (305)
T cd08270 294 -ARRFRGKAVLDV 305 (305)
T ss_pred -cCCCCceEEEeC
Confidence 888899999875
No 61
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=3.6e-40 Score=321.61 Aligned_cols=307 Identities=20% Similarity=0.261 Sum_probs=253.2
Q ss_pred eeEEEEccCCCCccceEeeeecCCCC-CCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSV-QKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSS 151 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~-~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~ 151 (405)
||++++++++. +++.+.|.|.| +++||+||+.+++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++
T Consensus 1 m~a~~~~~~~~----~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~ 75 (386)
T cd08283 1 MKALVWHGKGD----VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG-MKKGDILGHEFMGVVEEVGPEVRN 75 (386)
T ss_pred CeeEEEecCCC----ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC-CCCCccccccceEEEEEeCCCCCC
Confidence 78999987644 88999999988 5999999999999999999999998765 356899999999999999999999
Q ss_pred CCCCCEEEecCC----------------------------------------------CCCcccceEeeccc--ceEEcC
Q psy2960 152 LAVGDHVIPDTQ----------------------------------------------HLGTWRNYGKFNHD--VLMKVP 183 (405)
Q Consensus 152 ~~~GdrV~~~~~----------------------------------------------~~G~~a~~~~v~~~--~~~~iP 183 (405)
+++||+|++.+. ..|+|++|+.++.+ .++++|
T Consensus 76 ~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp 155 (386)
T cd08283 76 LKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIP 155 (386)
T ss_pred CCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECC
Confidence 999999987520 14899999999988 899999
Q ss_pred CCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHHcC
Q psy2960 184 KDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLG 262 (405)
Q Consensus 184 ~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~~~~lg 262 (405)
+++++++|++++..++|||+++ ..+++++|++|||+|+ |++|++++++|+.+|+. ++++.++ +++.+.+++++
T Consensus 156 ~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi~~~~~----~~~~~~~~~~~ 229 (386)
T cd08283 156 DDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAIDRV----PERLEMARSHL 229 (386)
T ss_pred CCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC----HHHHHHHHHcC
Confidence 9999999999999999999999 6689999999999975 99999999999999985 6666544 34577888884
Q ss_pred CcEEeChh---hHHH-HhhhcCCCCCcEEEECCCch----------------------hHHHHHHhcccCCEEEEEeccC
Q psy2960 263 ADYVFTEE---ELRN-ISRDASIPKPKLALNCVGGN----------------------SATNLLRTLVSKGVMVTYGGMS 316 (405)
Q Consensus 263 ~~~v~~~~---d~~~-i~~~t~g~g~Dvvld~~g~~----------------------~~~~~~~~l~~~G~~v~~g~~~ 316 (405)
...++++. ++.+ +.+.+.+.++|++|||+|++ .+..++++++++|+++.+|...
T Consensus 230 ~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~ 309 (386)
T cd08283 230 GAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYG 309 (386)
T ss_pred CcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCC
Confidence 44566643 2555 78888788899999999864 4566889999999999998654
Q ss_pred CCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCC--cceeeehhhHHHHHHHHhhhcCC
Q psy2960 317 REPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGK 394 (405)
Q Consensus 317 ~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~~~~~~~A~~~~~~~~~~ 394 (405)
.....++....+.+++++.+.... ..+.++++++++++|.+.+. +++.|+++++++||+.+. ++.
T Consensus 310 ~~~~~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~--~~~ 376 (386)
T cd08283 310 GTVNKFPIGAAMNKGLTLRMGQTH-----------VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFD--KKE 376 (386)
T ss_pred CCcCccCHHHHHhCCcEEEeccCC-----------chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHH--hCC
Confidence 323334444556788998886421 13557888899999999864 568899999999999988 665
Q ss_pred -CCceEEEEe
Q psy2960 395 -SGVKYYIDF 403 (405)
Q Consensus 395 -~~gKvvl~~ 403 (405)
..+|+||++
T Consensus 377 ~~~~k~~~~~ 386 (386)
T cd08283 377 DGCIKVVLKP 386 (386)
T ss_pred CCeEEEEecC
Confidence 568999863
No 62
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=8.8e-40 Score=312.40 Aligned_cols=313 Identities=24% Similarity=0.353 Sum_probs=261.0
Q ss_pred ceeEEEEccCCCC-ccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCC
Q psy2960 72 LANKLVYNQHGTP-LRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVS 150 (405)
Q Consensus 72 ~~~a~~~~~~g~~-~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~ 150 (405)
.||+|++.+++.. .+.+++++.+.|.+.++|++|||.++|+|+.|++...|.++....+|.++|||++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 4899999998771 256889999999999999999999999999999998887654346789999999999999999999
Q ss_pred CCCCCCEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHH
Q psy2960 151 SLAVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNV 230 (405)
Q Consensus 151 ~~~~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~a 230 (405)
.+++||+|++.. .|+|++|+.++.+.++++|++ +.+++++++++.|||+++...+++++|++|+|+|++|++|+++
T Consensus 81 ~~~~Gd~V~~~~--~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~ 156 (329)
T cd08250 81 DFKVGDAVATMS--FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFA 156 (329)
T ss_pred CCCCCCEEEEec--CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHH
Confidence 999999999873 589999999999999999997 4578889999999999998878999999999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCC
Q psy2960 231 IQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKG 307 (405)
Q Consensus 231 iqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G 307 (405)
+|+|+..|+++++++++.+ +.+.++++|++.+++.++ +.. +.+.. ++++|++|||+|+.....++++++++|
T Consensus 157 ~~~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~v~~~~~~~~~~~~~~~~-~~~vd~v~~~~g~~~~~~~~~~l~~~g 231 (329)
T cd08250 157 VQLAKLAGCHVIGTCSSDE----KAEFLKSLGCDRPINYKTEDLGEVLKKEY-PKGVDVVYESVGGEMFDTCVDNLALKG 231 (329)
T ss_pred HHHHHHcCCeEEEEeCcHH----HHHHHHHcCCceEEeCCCccHHHHHHHhc-CCCCeEEEECCcHHHHHHHHHHhccCC
Confidence 9999999999999886543 356678899988886543 444 55544 468999999999988888999999999
Q ss_pred EEEEEeccCCCC----------cccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCC--ccee
Q psy2960 308 VMVTYGGMSREP----------VQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAP--AHKF 375 (405)
Q Consensus 308 ~~v~~g~~~~~~----------~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--~~~~ 375 (405)
+++.+|...... ..+ ....+.+++++.++.+..+.. ...+.+.++.+++.+|.+++. +.+.
T Consensus 232 ~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~ 304 (329)
T cd08250 232 RLIVIGFISGYQSGTGPSPVKGATL-PPKLLAKSASVRGFFLPHYAK------LIPQHLDRLLQLYQRGKLVCEVDPTRF 304 (329)
T ss_pred eEEEEecccCCcccCcccccccccc-cHHHhhcCceEEEEEhHHHHH------HHHHHHHHHHHHHHCCCeeeeECCccc
Confidence 999998643221 111 123466889999987654321 235668889999999998874 4567
Q ss_pred eehhhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 376 VTLKNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 376 ~~~~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
|+++++++||+.+. .++..+|+|++
T Consensus 305 ~~~~~~~~a~~~~~--~~~~~~kvvv~ 329 (329)
T cd08250 305 RGLESVADAVDYLY--SGKNIGKVVVE 329 (329)
T ss_pred cCHHHHHHHHHHHH--cCCCCceEEeC
Confidence 99999999999999 78888999874
No 63
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=7.6e-40 Score=314.23 Aligned_cols=304 Identities=18% Similarity=0.273 Sum_probs=245.9
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++++++. +.+++.|.|+|+++|++||+.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|+.+
T Consensus 1 m~a~~~~~~~~----~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~ 75 (339)
T PRK10083 1 MKSIVIEKPNS----LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF-AKYPRVIGHEFFGVIDAVGEGVDAA 75 (339)
T ss_pred CeEEEEecCCe----eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc-CCCCcccccceEEEEEEECCCCccC
Confidence 78999998764 889999999999999999999999999999999887654 2568999999999999999999999
Q ss_pred CCCCEEEecC--------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHH
Q psy2960 153 AVGDHVIPDT--------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLK 206 (405)
Q Consensus 153 ~~GdrV~~~~--------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~ 206 (405)
++||+|+..+ ...|+|++|+.++...++++|+++++++++ +..++.++|++.
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~~- 153 (339)
T PRK10083 76 RIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANVT- 153 (339)
T ss_pred CCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHHH-
Confidence 9999998421 125899999999999999999999998876 456778888644
Q ss_pred hhcCCCCCCEEEEeCCCcHHHHHHHHHHHH-cCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCC
Q psy2960 207 DYNSLSPGDVVIQNGANSACGQNVIQIARH-WGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIP 282 (405)
Q Consensus 207 ~~~~~~~g~~VLI~ga~G~vG~~aiqla~~-~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~ 282 (405)
..+++++|++|+|+|+ |++|++++|+|+. +|+++++++++. +++++.++++|+++++++++ +.+ +.. .+.
T Consensus 154 ~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~~G~~~v~~~~~~---~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~--~g~ 227 (339)
T PRK10083 154 GRTGPTEQDVALIYGA-GPVGLTIVQVLKGVYNVKAVIVADRI---DERLALAKESGADWVINNAQEPLGEALEE--KGI 227 (339)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHhCCCCEEEEEcCC---HHHHHHHHHhCCcEEecCccccHHHHHhc--CCC
Confidence 5589999999999995 9999999999997 699876666442 45678889999999998754 333 432 134
Q ss_pred CCcEEEECCCc-hhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHH
Q psy2960 283 KPKLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTE 361 (405)
Q Consensus 283 g~Dvvld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (405)
++|++|||+|+ .....++++++++|+++.+|.... ...++...+..+++++.+.... .+.++++++
T Consensus 228 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~ 294 (339)
T PRK10083 228 KPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE-PSEIVQQGITGKELSIFSSRLN------------ANKFPVVID 294 (339)
T ss_pred CCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CceecHHHHhhcceEEEEEecC------------hhhHHHHHH
Confidence 56799999995 456788999999999999986432 2223333334577777765431 245788899
Q ss_pred HHHcCcccCC--cceeeehhhHHHHHHHHhhhcC-CCCceEEEEec
Q psy2960 362 MMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQG-KSGVKYYIDFR 404 (405)
Q Consensus 362 ~~~~g~l~~~--~~~~~~~~~~~~A~~~~~~~~~-~~~gKvvl~~~ 404 (405)
++++|.+++. ++++|+++++++||+.+. ++ ...+|+|++++
T Consensus 295 ~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~--~~~~~~~kvvv~~~ 338 (339)
T PRK10083 295 WLSKGLIDPEKLITHTFDFQHVADAIELFE--KDQRHCCKVLLTFA 338 (339)
T ss_pred HHHcCCCChHHheeeeecHHHHHHHHHHHh--cCCCceEEEEEecC
Confidence 9999999873 678999999999999987 54 45699999876
No 64
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4.2e-40 Score=315.33 Aligned_cols=305 Identities=24% Similarity=0.345 Sum_probs=257.3
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++++++++ +++++.|.|++.++|++||+.++++|++|++...|.++. ..+|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~~g~~~~~~ 76 (334)
T PRK13771 1 MKAVILPGFKQG---YRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR-MKYPVILGHEVVGTVEEVGENVKGF 76 (334)
T ss_pred CeeEEEcCCCCC---cEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCC-CCCCeeccccceEEEEEeCCCCccC
Confidence 789999998875 889999999999999999999999999999988887653 2567899999999999999999999
Q ss_pred CCCCEEEecCC--------------------------CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHH
Q psy2960 153 AVGDHVIPDTQ--------------------------HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLK 206 (405)
Q Consensus 153 ~~GdrV~~~~~--------------------------~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~ 206 (405)
++||+|++... ..|+|++|+.++.+.++++|+++++++++.+++++.+||+++.
T Consensus 77 ~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~ 156 (334)
T PRK13771 77 KPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLR 156 (334)
T ss_pred CCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHH
Confidence 99999998731 1589999999999999999999999999999999999999997
Q ss_pred hhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHH-HhhhcCCCCCc
Q psy2960 207 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPK 285 (405)
Q Consensus 207 ~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~-i~~~t~g~g~D 285 (405)
.. .+++|++|+|+|++|++|++++|+|+.+|+++++++++.++ .+.++++ ++++++.+++.+ +.+. + ++|
T Consensus 157 ~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~v~~~--~-~~d 227 (334)
T PRK13771 157 RA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESK----AKIVSKY-ADYVIVGSKFSEEVKKI--G-GAD 227 (334)
T ss_pred hc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHH-HHHhcCchhHHHHHHhc--C-CCc
Confidence 75 99999999999999999999999999999999888765433 4556667 777777665555 6554 2 699
Q ss_pred EEEECCCchhHHHHHHhcccCCEEEEEeccCCCCc-ccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHH
Q psy2960 286 LALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPV-QIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMR 364 (405)
Q Consensus 286 vvld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (405)
+++||+|+.....++++++++|+++.+|....... .......+.+++++.+..... .+.+++++++++
T Consensus 228 ~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 296 (334)
T PRK13771 228 IVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISAT-----------KRDVEEALKLVA 296 (334)
T ss_pred EEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCC-----------HHHHHHHHHHHH
Confidence 99999999888888999999999999996433221 122333356788888864211 345788899999
Q ss_pred cCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 365 TGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 365 ~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
+|.+++.++++|+++++++||+.+. ++...||+++++
T Consensus 297 ~~~l~~~~~~~~~~~~~~~a~~~~~--~~~~~~kvv~~~ 333 (334)
T PRK13771 297 EGKIKPVIGAEVSLSEIDKALEELK--DKSRIGKILVKP 333 (334)
T ss_pred cCCCcceEeeeEcHHHHHHHHHHHH--cCCCcceEEEec
Confidence 9999877889999999999999999 778899999875
No 65
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=9.8e-40 Score=314.87 Aligned_cols=308 Identities=22% Similarity=0.295 Sum_probs=255.6
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCC-----------CCCCCCCCccceEEE
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPI-----------KPTLPAVPGFEGVGE 141 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-----------~~~~p~~lG~E~~G~ 141 (405)
||++++..++.+ +++++.|.|++.++||+||+.++++|++|++.+.|.++. ...+|.++|||++|+
T Consensus 1 ~~a~~~~~~~~~---~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~ 77 (350)
T cd08240 1 MKAAAVVEPGKP---LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGE 77 (350)
T ss_pred CeeEEeccCCCC---ceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEE
Confidence 789999888765 789999999999999999999999999999998886532 224568899999999
Q ss_pred EEEEcCCCCCCCCCCEEEecCC--------------------------CCCcccceEeecccceEEcCCCCChhhhccCC
Q psy2960 142 VVEVGSDVSSLAVGDHVIPDTQ--------------------------HLGTWRNYGKFNHDVLMKVPKDIALTEISGIT 195 (405)
Q Consensus 142 V~~vG~~v~~~~~GdrV~~~~~--------------------------~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~ 195 (405)
|+++|++++++++||+|++++. ..|++++|+.++.+.++++|++++++++++++
T Consensus 78 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~ 157 (350)
T cd08240 78 VVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLA 157 (350)
T ss_pred EEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhh
Confidence 9999999999999999998621 35899999999999999999999999999999
Q ss_pred CcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHHcCCcEEeChhh--H
Q psy2960 196 SNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEEE--L 272 (405)
Q Consensus 196 ~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~ 272 (405)
+.++|||+++.....+++|++|||+|+ |++|++++|+|+.+|++ ++++.++ +++++.++++|++.+++.++ +
T Consensus 158 ~~~~tA~~~~~~~~~~~~~~~vlI~g~-g~vg~~~~~~a~~~G~~~v~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~ 232 (350)
T cd08240 158 CSGLTAYSAVKKLMPLVADEPVVIIGA-GGLGLMALALLKALGPANIIVVDID----EAKLEAAKAAGADVVVNGSDPDA 232 (350)
T ss_pred chhhhHHHHHHhcccCCCCCEEEEECC-cHHHHHHHHHHHHcCCCeEEEEeCC----HHHHHHHHHhCCcEEecCCCccH
Confidence 999999999988777779999999965 99999999999999995 5555433 34567778899998887653 3
Q ss_pred HH-HhhhcCCCCCcEEEECCCc-hhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHH
Q psy2960 273 RN-ISRDASIPKPKLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESA 350 (405)
Q Consensus 273 ~~-i~~~t~g~g~Dvvld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~ 350 (405)
.+ +.+.+.+ ++|++||++|. .....++++|+++|+++.+|..... ...+...+..+++++.+++...
T Consensus 233 ~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~--------- 301 (350)
T cd08240 233 AKRIIKAAGG-GVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE-ATLPLPLLPLRALTIQGSYVGS--------- 301 (350)
T ss_pred HHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC-CcccHHHHhhcCcEEEEcccCC---------
Confidence 34 6666655 89999999985 5567789999999999999854432 1223333445888888876543
Q ss_pred HHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 351 ERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 351 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
.+.+..+++++++|.+++.+...|+++++++||+.+. +++..||+++++
T Consensus 302 --~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~--~~~~~gkvvv~~ 350 (350)
T cd08240 302 --LEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLK--AGKVVGRAVLKP 350 (350)
T ss_pred --HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHH--cCCccceEEecC
Confidence 2457778899999999877788999999999999999 888899999853
No 66
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1.3e-39 Score=311.39 Aligned_cols=305 Identities=26% Similarity=0.395 Sum_probs=256.6
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++..++++ +.+++.|.|.+.++||+|+|.++++|++|++...|.++. ...|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~~G~~v~~~ 76 (332)
T cd08259 1 MKAAILHKPNKP---LQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR-GKYPLILGHEIVGTVEEVGEGVERF 76 (332)
T ss_pred CeEEEEecCCCc---eEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC-CCCCeeccccceEEEEEECCCCccC
Confidence 789999874443 888999999999999999999999999999999887664 3567899999999999999999999
Q ss_pred CCCCEEEecCC--------------------------CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHH
Q psy2960 153 AVGDHVIPDTQ--------------------------HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLK 206 (405)
Q Consensus 153 ~~GdrV~~~~~--------------------------~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~ 206 (405)
++||+|+++.. ..|+|++|+.++...++++|+++++++++++++++.|||+++.
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~ 156 (332)
T cd08259 77 KPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALK 156 (332)
T ss_pred CCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHH
Confidence 99999998741 1589999999999999999999999999999999999999998
Q ss_pred hhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHH-HhhhcCCCCCc
Q psy2960 207 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPK 285 (405)
Q Consensus 207 ~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~-i~~~t~g~g~D 285 (405)
. +.+++|++|||+|++|++|++++++|+..|+++++++++.+ +.+.+.++|.+.+++.+++.+ +.+.. ++|
T Consensus 157 ~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d 228 (332)
T cd08259 157 R-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPE----KLKILKELGADYVIDGSKFSEDVKKLG---GAD 228 (332)
T ss_pred H-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHH----HHHHHHHcCCcEEEecHHHHHHHHhcc---CCC
Confidence 7 89999999999999999999999999999999998885543 356667889888887766544 55543 799
Q ss_pred EEEECCCchhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHc
Q psy2960 286 LALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRT 365 (405)
Q Consensus 286 vvld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (405)
+++||+|......++++++++|+++.+|........++......++.++.++.... .+.++++++++++
T Consensus 229 ~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ 297 (332)
T cd08259 229 VVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISAT-----------KADVEEALKLVKE 297 (332)
T ss_pred EEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCC-----------HHHHHHHHHHHHc
Confidence 99999999888888999999999999986543222222222334677777764211 3457788899999
Q ss_pred CcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 366 GKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 366 g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
|.+++.++++|+++++++||+.+. +++..||+|++
T Consensus 298 ~~l~~~~~~~~~~~~~~~a~~~~~--~~~~~~kvv~~ 332 (332)
T cd08259 298 GKIKPVIDRVVSLEDINEALEDLK--SGKVVGRIVLK 332 (332)
T ss_pred CCCccceeEEEcHHHHHHHHHHHH--cCCcccEEEeC
Confidence 999988889999999999999999 88889999874
No 67
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=1e-39 Score=316.18 Aligned_cols=308 Identities=24% Similarity=0.348 Sum_probs=257.3
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||||++.+++.+ +++.+.|.|+++++||+|||.++++|+.|+..+.|.++. .+|.++|+|++|+|+++|+++..+
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~ 75 (363)
T cd08279 1 MRAAVLHEVGKP---LEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPA--PLPAVLGHEGAGVVEEVGPGVTGV 75 (363)
T ss_pred CeEEEEecCCCC---ceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCC--CCCccccccceEEEEEeCCCcccc
Confidence 799999998765 889999999999999999999999999999999887663 567899999999999999999999
Q ss_pred CCCCEEEecC----------------------------------------------CCCCcccceEeecccceEEcCCCC
Q psy2960 153 AVGDHVIPDT----------------------------------------------QHLGTWRNYGKFNHDVLMKVPKDI 186 (405)
Q Consensus 153 ~~GdrV~~~~----------------------------------------------~~~G~~a~~~~v~~~~~~~iP~~~ 186 (405)
++||+|++.+ ...|+|++|+.++.+.++++|+++
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~ 155 (363)
T cd08279 76 KPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDI 155 (363)
T ss_pred CCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCC
Confidence 9999999842 135899999999999999999999
Q ss_pred ChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHHcCCcE
Q psy2960 187 ALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADY 265 (405)
Q Consensus 187 s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~~~~lg~~~ 265 (405)
++++++.+++++.|||+++...+++++|++|||+|+ |++|++++++|+.+|++ +++++++++ +.+.++++|+++
T Consensus 156 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~-g~vG~a~i~lak~~G~~~Vi~~~~~~~----~~~~~~~~g~~~ 230 (363)
T cd08279 156 PLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGC-GGVGLNAIQGARIAGASRIIAVDPVPE----KLELARRFGATH 230 (363)
T ss_pred ChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHH----HHHHHHHhCCeE
Confidence 999999999999999999988889999999999965 99999999999999997 777765433 456778899999
Q ss_pred EeChh--hHHH-HhhhcCCCCCcEEEECCCc-hhHHHHHHhcccCCEEEEEeccCC-CCcccCcccccccCeEEEEEecc
Q psy2960 266 VFTEE--ELRN-ISRDASIPKPKLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSR-EPVQIPTSAFIFKDITLRGHWMT 340 (405)
Q Consensus 266 v~~~~--d~~~-i~~~t~g~g~Dvvld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~k~~~~~g~~~~ 340 (405)
+++++ ++.. +.+.+.++++|++|||+++ .....++++++++|+++.+|.... ....++...+..++.++.++++.
T Consensus 231 vv~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (363)
T cd08279 231 TVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYG 310 (363)
T ss_pred EeCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEec
Confidence 98865 3444 7777777889999999995 556778999999999999985442 23344555555677787887653
Q ss_pred hhhhhhccHHHHHHHHHHHHHHHHcCcccCC--cceeeehhhHHHHHHHHhhhcCCCCceEE
Q psy2960 341 RWQKENKESAERKSMMNELTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYY 400 (405)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~~~~~~~A~~~~~~~~~~~~gKvv 400 (405)
.. ...+.+++++++++++.+++. ++++|+++++++||+.+. +++..+.|+
T Consensus 311 ~~--------~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~~~ 362 (363)
T cd08279 311 SA--------NPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADML--AGENARGVI 362 (363)
T ss_pred Cc--------CcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHh--cCCceeEEe
Confidence 21 124568888999999999863 678899999999999998 777665554
No 68
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=1.5e-39 Score=311.96 Aligned_cols=304 Identities=23% Similarity=0.328 Sum_probs=250.9
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++++++.. ..+++.|.|.++++||+|||.++++|++|++.+.|.++. ..|.++|||++|+|+++|++++.|
T Consensus 1 mka~~~~~~~~~---~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~~G~~v~~~ 75 (338)
T PRK09422 1 MKAAVVNKDHTG---DVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD--KTGRILGHEGIGIVKEVGPGVTSL 75 (338)
T ss_pred CeEEEecCCCCC---ceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC--CCCccCCcccceEEEEECCCCccC
Confidence 799999988764 237899999999999999999999999999999887653 347899999999999999999999
Q ss_pred CCCCEEEecC---------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHH
Q psy2960 153 AVGDHVIPDT---------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRML 205 (405)
Q Consensus 153 ~~GdrV~~~~---------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al 205 (405)
++||+|++.+ ...|+|++|+.++...++++|++++++++++++.+++|||+++
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~ 155 (338)
T PRK09422 76 KVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI 155 (338)
T ss_pred CCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH
Confidence 9999998621 1158999999999999999999999999999999999999998
Q ss_pred HhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHc-CCcEEEEecCCcchHHHHHHHHHcCCcEEeChh---hHHH-HhhhcC
Q psy2960 206 KDYNSLSPGDVVIQNGANSACGQNVIQIARHW-GLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE---ELRN-ISRDAS 280 (405)
Q Consensus 206 ~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~-G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~---d~~~-i~~~t~ 280 (405)
..+++++|++|||+|+ |++|++++|+|+.+ |+++++++++++ +++.++++|++.+++++ ++.. +++.++
T Consensus 156 -~~~~~~~g~~vlV~g~-g~vG~~~~~la~~~~g~~v~~~~~~~~----~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~ 229 (338)
T PRK09422 156 -KVSGIKPGQWIAIYGA-GGLGNLALQYAKNVFNAKVIAVDINDD----KLALAKEVGADLTINSKRVEDVAKIIQEKTG 229 (338)
T ss_pred -HhcCCCCCCEEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCChH----HHHHHHHcCCcEEecccccccHHHHHHHhcC
Confidence 5689999999999995 99999999999984 999999986654 46778899999998864 2344 666654
Q ss_pred CCCCc-EEEECCCchhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHH
Q psy2960 281 IPKPK-LALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNEL 359 (405)
Q Consensus 281 g~g~D-vvld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 359 (405)
++| +++++.+++....++++++++|+++.+|.... ...++...+..++.++.++.... .+.++.+
T Consensus 230 --~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 295 (338)
T PRK09422 230 --GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE-SMDLSIPRLVLDGIEVVGSLVGT-----------RQDLEEA 295 (338)
T ss_pred --CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC-CceecHHHHhhcCcEEEEecCCC-----------HHHHHHH
Confidence 688 55666666777788999999999999985422 22334444556778887765332 2347788
Q ss_pred HHHHHcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEec
Q psy2960 360 TEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 404 (405)
Q Consensus 360 ~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~~ 404 (405)
++++++|.+.+.+ +.++++++++||+.+. ++...||++++++
T Consensus 296 ~~l~~~g~l~~~v-~~~~~~~~~~a~~~~~--~~~~~gkvvv~~~ 337 (338)
T PRK09422 296 FQFGAEGKVVPKV-QLRPLEDINDIFDEME--QGKIQGRMVIDFT 337 (338)
T ss_pred HHHHHhCCCCccE-EEEcHHHHHHHHHHHH--cCCccceEEEecC
Confidence 8999999987654 4689999999999999 8899999999764
No 69
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=1.2e-39 Score=313.89 Aligned_cols=307 Identities=21% Similarity=0.258 Sum_probs=252.7
Q ss_pred eeEEEEccCCCCccceEeeeecCCCC-CCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSV-QKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSS 151 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~-~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~ 151 (405)
||++++.+++. +.+.+.|.|.| .++||+|||.++++|++|++.+.|.++. .++|.++|+|++|+|+++|+++++
T Consensus 1 ~ka~~~~~~~~----~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~ 75 (347)
T cd05278 1 MKALVYLGPGK----IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG-AKHGMILGHEFVGEVVEVGSDVKR 75 (347)
T ss_pred CceEEEecCCc----eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC-CCCCceeccceEEEEEEECCCccc
Confidence 68999988765 78899999999 9999999999999999999999987764 366899999999999999999999
Q ss_pred CCCCCEEEecC-----------------------------CCCCcccceEeeccc--ceEEcCCCCChhhhccCCCcHHH
Q psy2960 152 LAVGDHVIPDT-----------------------------QHLGTWRNYGKFNHD--VLMKVPKDIALTEISGITSNPCT 200 (405)
Q Consensus 152 ~~~GdrV~~~~-----------------------------~~~G~~a~~~~v~~~--~~~~iP~~~s~~~Aa~~~~~~~t 200 (405)
+++||+|++.+ ...|+|++|++++.+ +++++|+++++++|++++++++|
T Consensus 76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~t 155 (347)
T cd05278 76 LKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPT 155 (347)
T ss_pred cCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhh
Confidence 99999999721 125899999999997 89999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-Hh
Q psy2960 201 AYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-IS 276 (405)
Q Consensus 201 a~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~-~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~ 276 (405)
||+++ ...++++|++|||.|+ |++|++++|+|+.+|+ .++++.++ +.+.+.++++|++.++++++ +.+ ++
T Consensus 156 a~~~~-~~~~~~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~~~----~~~~~~~~~~g~~~vi~~~~~~~~~~i~ 229 (347)
T cd05278 156 GFHGA-ELAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVDSN----PERLDLAKEAGATDIINPKNGDIVEQIL 229 (347)
T ss_pred eeehh-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC----HHHHHHHHHhCCcEEEcCCcchHHHHHH
Confidence 99998 5589999999999875 9999999999999997 56666433 34467778899999987653 445 77
Q ss_pred hhcCCCCCcEEEECCCc-hhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHH
Q psy2960 277 RDASIPKPKLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSM 355 (405)
Q Consensus 277 ~~t~g~g~Dvvld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~ 355 (405)
+.+++.++|++|||+|+ .....++++|+++|+++.+|..............+.+++++.+..... .+.
T Consensus 230 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~ 298 (347)
T cd05278 230 ELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV-----------RAR 298 (347)
T ss_pred HHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCc-----------hhH
Confidence 77777889999999998 566788999999999999985432211112223346788887754221 346
Q ss_pred HHHHHHHHHcCcccCC--cceeeehhhHHHHHHHHhhhcCCC-CceEEEEe
Q psy2960 356 MNELTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKS-GVKYYIDF 403 (405)
Q Consensus 356 ~~~~~~~~~~g~l~~~--~~~~~~~~~~~~A~~~~~~~~~~~-~gKvvl~~ 403 (405)
++++.+++++|.+++. +...|+++++++||+.+. .++. .+|+|+++
T Consensus 299 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~~~vv~~ 347 (347)
T cd05278 299 MPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFD--NKPDGCIKVVIRP 347 (347)
T ss_pred HHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHh--cCCCCceEEEecC
Confidence 8888999999999864 567899999999999988 6776 78999863
No 70
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=2.1e-39 Score=310.92 Aligned_cols=304 Identities=22% Similarity=0.347 Sum_probs=253.5
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++++++. +.+.+.|.|++.++||+|||.++++|+.|+....|.++.. .+|.++|+|++|+|+.+|++++.+
T Consensus 1 ~~a~~~~~~~~----~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~-~~~~~~g~e~~G~V~~~G~~v~~~ 75 (337)
T cd08261 1 MKALVCEKPGR----LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA-SYPRILGHELSGEVVEVGEGVAGL 75 (337)
T ss_pred CeEEEEeCCCc----eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC-CCCcccccccEEEEEEeCCCCCCC
Confidence 68999988754 8899999999999999999999999999999998876653 457899999999999999999999
Q ss_pred CCCCEEEecC--------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHH
Q psy2960 153 AVGDHVIPDT--------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLK 206 (405)
Q Consensus 153 ~~GdrV~~~~--------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~ 206 (405)
++||+|++.+ ...|+|++|+.++++ ++++|+++++++|+++ ..++++++++
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~- 152 (337)
T cd08261 76 KVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV- 152 (337)
T ss_pred CCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-
Confidence 9999999731 125899999999999 9999999999999887 5788899888
Q ss_pred hhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCCC
Q psy2960 207 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIPK 283 (405)
Q Consensus 207 ~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~g 283 (405)
...++++|++|||+|+ |++|++++|+|+.+|+++++++++.+ +.+.++++|+++++++++ +.+ +.+.+.+.+
T Consensus 153 ~~~~l~~g~~vLI~g~-g~vG~~a~~lA~~~g~~v~~~~~s~~----~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~ 227 (337)
T cd08261 153 RRAGVTAGDTVLVVGA-GPIGLGVIQVAKARGARVIVVDIDDE----RLEFARELGADDTINVGDEDVAARLRELTDGEG 227 (337)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEECCCHH----HHHHHHHhCCCEEecCcccCHHHHHHHHhCCCC
Confidence 6689999999999975 89999999999999999999876533 456778899999998654 445 777777788
Q ss_pred CcEEEECCCc-hhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHH
Q psy2960 284 PKLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEM 362 (405)
Q Consensus 284 ~Dvvld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (405)
+|+++||+|+ .....++++++++|+++.+|... ....++...+..+++++.+.... ..+.++++.++
T Consensus 228 vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l 295 (337)
T cd08261 228 ADVVIDATGNPASMEEAVELVAHGGRVVLVGLSK-GPVTFPDPEFHKKELTILGSRNA-----------TREDFPDVIDL 295 (337)
T ss_pred CCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCC-CCCccCHHHHHhCCCEEEEeccC-----------ChhhHHHHHHH
Confidence 9999999986 45667899999999999998543 22233333445577777765311 13457788899
Q ss_pred HHcCcccC--CcceeeehhhHHHHHHHHhhhcC-CCCceEEEEe
Q psy2960 363 MRTGKLAA--PAHKFVTLKNFQEALMNTMSIQG-KSGVKYYIDF 403 (405)
Q Consensus 363 ~~~g~l~~--~~~~~~~~~~~~~A~~~~~~~~~-~~~gKvvl~~ 403 (405)
+++|.+++ .+..+|+++++.+|++.+. ++ ...+|+|+++
T Consensus 296 ~~~~~i~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~k~v~~~ 337 (337)
T cd08261 296 LESGKVDPEALITHRFPFEDVPEAFDLWE--APPGGVIKVLIEF 337 (337)
T ss_pred HHcCCCChhhheEEEeeHHHHHHHHHHHh--cCCCceEEEEEeC
Confidence 99999997 6778999999999999998 77 4889999875
No 71
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=4.3e-39 Score=306.97 Aligned_cols=315 Identities=20% Similarity=0.277 Sum_probs=258.6
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||+++++++|++ +.+++++.|.|+|+++||+||+.++++|++|.....|.++..+.+|.++|||++|+|++ ++++++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~ 77 (324)
T cd08288 1 FKALVLEKDDGG-TSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRF 77 (324)
T ss_pred CeeEEEeccCCC-cceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCC
Confidence 789999998876 55899999999999999999999999999999998887643334678899999999998 778889
Q ss_pred CCCCEEEecC-----CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHh--hcCCC-CCCEEEEeCCCc
Q psy2960 153 AVGDHVIPDT-----QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKD--YNSLS-PGDVVIQNGANS 224 (405)
Q Consensus 153 ~~GdrV~~~~-----~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~--~~~~~-~g~~VLI~ga~G 224 (405)
++||+|+++. ...|+|++|+.++.+.++++|+++++++++.++++++|+++++.. ..+.. +|++|||+|++|
T Consensus 78 ~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g 157 (324)
T cd08288 78 KPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAG 157 (324)
T ss_pred CCCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCc
Confidence 9999999863 125899999999999999999999999999999999999877641 13455 678999999999
Q ss_pred HHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHH-HhhhcCCCCCcEEEECCCchhHHHHHHhc
Q psy2960 225 ACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKLALNCVGGNSATNLLRTL 303 (405)
Q Consensus 225 ~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l 303 (405)
++|++++|+|+++|+++++++++.+ +.+.++++|+++++++++... +...+.+ ++|.++|++++......+.++
T Consensus 158 ~vg~~~~~~A~~~G~~vi~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~ 232 (324)
T cd08288 158 GVGSVAVALLARLGYEVVASTGRPE----EADYLRSLGASEIIDRAELSEPGRPLQKE-RWAGAVDTVGGHTLANVLAQT 232 (324)
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCHH----HHHHHHhcCCCEEEEcchhhHhhhhhccC-cccEEEECCcHHHHHHHHHHh
Confidence 9999999999999999999886543 467778999999998876555 5555433 589999999987677788899
Q ss_pred ccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHH
Q psy2960 304 VSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQE 383 (405)
Q Consensus 304 ~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~ 383 (405)
+.+|+++.+|.....+...+...++.+++++.+++...... +...+.++.+.+++.++.+.+ +.+.|+++++++
T Consensus 233 ~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~ 306 (324)
T cd08288 233 RYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPI-----ERRRAAWARLARDLDPALLEA-LTREIPLADVPD 306 (324)
T ss_pred cCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccc-----hhhHHHHHHHHHHHhcCCccc-cceeecHHHHHH
Confidence 99999999996532222333344447899999986443211 223567788888999998876 578999999999
Q ss_pred HHHHHhhhcCCCCceEEEEe
Q psy2960 384 ALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 384 A~~~~~~~~~~~~gKvvl~~ 403 (405)
||+.+. +++..+|+|+++
T Consensus 307 a~~~~~--~~~~~~~vvv~~ 324 (324)
T cd08288 307 AAEAIL--AGQVRGRVVVDV 324 (324)
T ss_pred HHHHHh--cCCccCeEEEeC
Confidence 999999 899999999874
No 72
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=1.7e-39 Score=311.49 Aligned_cols=302 Identities=20% Similarity=0.300 Sum_probs=253.1
Q ss_pred eEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCCC
Q psy2960 74 NKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSLA 153 (405)
Q Consensus 74 ~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~ 153 (405)
|+|+++..+.- +++.+.|.|+|.++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus 1 ~~~~~~~~~~~---~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~ 76 (337)
T cd05283 1 KGYAARDASGK---LEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGP-TKYPLVPGHEIVGIVVAVGSKVTKFK 76 (337)
T ss_pred CceEEecCCCC---ceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCC-CCCCcccCcceeeEEEEECCCCcccC
Confidence 46777777643 899999999999999999999999999999999887643 35689999999999999999999999
Q ss_pred CCCEEEec----------------------------------CCCCCcccceEeecccceEEcCCCCChhhhccCCCcHH
Q psy2960 154 VGDHVIPD----------------------------------TQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPC 199 (405)
Q Consensus 154 ~GdrV~~~----------------------------------~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ 199 (405)
+||+|+.. ....|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ 156 (337)
T cd05283 77 VGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGI 156 (337)
T ss_pred CCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHH
Confidence 99999731 02358999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhc
Q psy2960 200 TAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDA 279 (405)
Q Consensus 200 ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t 279 (405)
|||+++.. .++++|++|+|.|+ |++|++++++|+.+|+++++++++++ +.+.++++|++.+++.++.......
T Consensus 157 ta~~~~~~-~~~~~g~~vlV~g~-g~vG~~~~~~a~~~G~~v~~~~~~~~----~~~~~~~~g~~~vi~~~~~~~~~~~- 229 (337)
T cd05283 157 TVYSPLKR-NGVGPGKRVGVVGI-GGLGHLAVKFAKALGAEVTAFSRSPS----KKEDALKLGADEFIATKDPEAMKKA- 229 (337)
T ss_pred HHHHHHHh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEcCCHH----HHHHHHHcCCcEEecCcchhhhhhc-
Confidence 99999877 46999999999875 99999999999999999888875543 4677788999999876542222221
Q ss_pred CCCCCcEEEECCCchh-HHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHH
Q psy2960 280 SIPKPKLALNCVGGNS-ATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNE 358 (405)
Q Consensus 280 ~g~g~Dvvld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 358 (405)
+.++|+++||+|+.. ...++++++++|+++.+|..... ..++...++.+++++.+++... .+.++.
T Consensus 230 -~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~ 296 (337)
T cd05283 230 -AGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEP-LPVPPFPLIFGRKSVAGSLIGG-----------RKETQE 296 (337)
T ss_pred -cCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCC-CccCHHHHhcCceEEEEecccC-----------HHHHHH
Confidence 467999999999875 67889999999999999965432 2445555567999999987653 245777
Q ss_pred HHHHHHcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 359 LTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 359 ~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
+++++++|++++. .++|+++++++||+.+. ++++.||+|++
T Consensus 297 ~~~~~~~~~l~~~-~~~~~~~~~~~a~~~~~--~~~~~~k~v~~ 337 (337)
T cd05283 297 MLDFAAEHGIKPW-VEVIPMDGINEALERLE--KGDVRYRFVLD 337 (337)
T ss_pred HHHHHHhCCCccc-eEEEEHHHHHHHHHHHH--cCCCcceEeeC
Confidence 8899999999875 57899999999999999 89999999975
No 73
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=2.6e-39 Score=311.89 Aligned_cols=304 Identities=22% Similarity=0.325 Sum_probs=249.6
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCC--------CCCCCCCCccceEEEEEE
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPI--------KPTLPAVPGFEGVGEVVE 144 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--------~~~~p~~lG~E~~G~V~~ 144 (405)
||+++++++++ +++++.|.|++.++||+||+.++|||++|++.+.|.... ...+|.++|||++|+|++
T Consensus 1 mka~~~~~~~~----~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~ 76 (350)
T cd08256 1 MRAVVCHGPQD----YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVE 76 (350)
T ss_pred CeeEEEecCCc----eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEE
Confidence 78999988765 889999999999999999999999999999998885311 014578999999999999
Q ss_pred EcCCCC--CCCCCCEEEecC----------------------------CCCCcccceEeeccc-ceEEcCCCCChhhhcc
Q psy2960 145 VGSDVS--SLAVGDHVIPDT----------------------------QHLGTWRNYGKFNHD-VLMKVPKDIALTEISG 193 (405)
Q Consensus 145 vG~~v~--~~~~GdrV~~~~----------------------------~~~G~~a~~~~v~~~-~~~~iP~~~s~~~Aa~ 193 (405)
+|++++ +|++||+|++.+ ...|+|++|+.++++ .++++|+++++++|++
T Consensus 77 vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~ 156 (350)
T cd08256 77 LGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAIL 156 (350)
T ss_pred eCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhh
Confidence 999999 999999999721 135899999999988 5789999999999998
Q ss_pred CCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChh--h
Q psy2960 194 ITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--E 271 (405)
Q Consensus 194 ~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~--d 271 (405)
+ .++.|+|+++ ..+++++|++|+|.|+ |++|++++|+|+++|+.++.++++. +.+.+.+.++|++++++++ +
T Consensus 157 ~-~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~~~---~~~~~~~~~~g~~~v~~~~~~~ 230 (350)
T cd08256 157 I-EPLACALHAV-DRANIKFDDVVVLAGA-GPLGLGMIGAARLKNPKKLIVLDLK---DERLALARKFGADVVLNPPEVD 230 (350)
T ss_pred h-hHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC---HHHHHHHHHcCCcEEecCCCcC
Confidence 8 8999999998 6689999999999555 9999999999999999877666443 3456788899999998764 3
Q ss_pred HHH-HhhhcCCCCCcEEEECCCc-hhHHHHHHhcccCCEEEEEeccCCCCcccCcccc-cccCeEEEEEecchhhhhhcc
Q psy2960 272 LRN-ISRDASIPKPKLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAF-IFKDITLRGHWMTRWQKENKE 348 (405)
Q Consensus 272 ~~~-i~~~t~g~g~Dvvld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~k~~~~~g~~~~~~~~~~~~ 348 (405)
+.. +.+.+++.++|++|||+|+ .....++++++++|+++.+|.... ...++...+ ..+++++.+++...
T Consensus 231 ~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~------- 302 (350)
T cd08256 231 VVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGD-PVTVDWSIIGDRKELDVLGSHLGP------- 302 (350)
T ss_pred HHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCC-CCccChhHhhcccccEEEEeccCc-------
Confidence 555 7778888899999999996 456678999999999999985432 222333222 24677787766432
Q ss_pred HHHHHHHHHHHHHHHHcCcccCC--cceeeehhhHHHHHHHHhhhcCCCCceEEE
Q psy2960 349 SAERKSMMNELTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYI 401 (405)
Q Consensus 349 ~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl 401 (405)
..+.++++++++|.+++. ++++|+++++++||+.++ +++..+|+|+
T Consensus 303 -----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~--~~~~~~kvv~ 350 (350)
T cd08256 303 -----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMA--RGDDSIKVVL 350 (350)
T ss_pred -----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHH--hCCCceEEeC
Confidence 246778899999999874 678999999999999999 8888899885
No 74
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=2.4e-39 Score=311.55 Aligned_cols=307 Identities=24% Similarity=0.353 Sum_probs=258.8
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||+|++.+++.+ +.+.+.|.|.+.++||+||+.++++|++|+....|..+. ..+|.++|+|++|+|+.+|++++.+
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~~G~~~~~~ 76 (345)
T cd08260 1 MRAAVYEEFGEP---LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD-VTLPHVPGHEFAGVVVEVGEDVSRW 76 (345)
T ss_pred CeeEEEecCCCC---cEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC-CCCCeeeccceeEEEEEECCCCccC
Confidence 799999988875 888999999999999999999999999999999887654 3568899999999999999999999
Q ss_pred CCCCEEEec--------------------------CCCCCcccceEeeccc--ceEEcCCCCChhhhccCCCcHHHHHHH
Q psy2960 153 AVGDHVIPD--------------------------TQHLGTWRNYGKFNHD--VLMKVPKDIALTEISGITSNPCTAYRM 204 (405)
Q Consensus 153 ~~GdrV~~~--------------------------~~~~G~~a~~~~v~~~--~~~~iP~~~s~~~Aa~~~~~~~ta~~a 204 (405)
++||+|++. ....|+|++|+.++.. .++++|+++++++++.++.+++|||++
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~ 156 (345)
T cd08260 77 RVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRA 156 (345)
T ss_pred CCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHH
Confidence 999999871 0125899999999985 899999999999999999999999999
Q ss_pred HHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh---HHH-HhhhcC
Q psy2960 205 LKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE---LRN-ISRDAS 280 (405)
Q Consensus 205 l~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d---~~~-i~~~t~ 280 (405)
+...+++.+|++|+|+| +|++|++++|+|+.+|+++++++++.++ .+.++++|++.++++++ +.. +.+.+.
T Consensus 157 l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~----~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~ 231 (345)
T cd08260 157 LVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDK----LELARELGAVATVNASEVEDVAAAVRDLTG 231 (345)
T ss_pred HHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHH----HHHHHHhCCCEEEccccchhHHHHHHHHhC
Confidence 98778999999999999 5999999999999999999999866443 56667899999997653 444 666766
Q ss_pred CCCCcEEEECCCc-hhHHHHHHhcccCCEEEEEeccCCCC--cccCcccccccCeEEEEEecchhhhhhccHHHHHHHHH
Q psy2960 281 IPKPKLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREP--VQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMN 357 (405)
Q Consensus 281 g~g~Dvvld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~ 357 (405)
+ ++|++|||+|+ .....++++++++|+++.+|...... ..++...++.+++++.++.... .+.++
T Consensus 232 ~-~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 299 (345)
T cd08260 232 G-GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMP-----------AHRYD 299 (345)
T ss_pred C-CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCC-----------HHHHH
Confidence 6 89999999985 55667899999999999998654332 2344444557888888876422 34577
Q ss_pred HHHHHHHcCcccCC--cceeeehhhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 358 ELTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 358 ~~~~~~~~g~l~~~--~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
+++++++++.+.+. +++.|+++++++||+.+. +++..||+|++
T Consensus 300 ~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~~v~~ 344 (345)
T cd08260 300 AMLALIASGKLDPEPLVGRTISLDEAPDALAAMD--DYATAGITVIT 344 (345)
T ss_pred HHHHHHHcCCCChhhheeEEecHHHHHHHHHHHH--cCCCCceEEec
Confidence 88899999998864 578999999999999999 88999999875
No 75
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.1e-39 Score=308.26 Aligned_cols=312 Identities=21% Similarity=0.287 Sum_probs=266.9
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||||+++..+.+ +.+++++.+.|.++++|++|++.++++|++|++...|.++..+..|.++|||++|+|+++|+++.++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (336)
T cd08276 1 MKAWRLSGGGGL-DNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRF 79 (336)
T ss_pred CeEEEEeccCCC-cceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCC
Confidence 799999977543 3488888888889999999999999999999999988776544578899999999999999999999
Q ss_pred CCCCEEEecCC--------------------CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCC
Q psy2960 153 AVGDHVIPDTQ--------------------HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLS 212 (405)
Q Consensus 153 ~~GdrV~~~~~--------------------~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~ 212 (405)
++||+|++... ..|+|++|+.++.+.++++|+++++.+++.+++++++||+++...+.++
T Consensus 80 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~ 159 (336)
T cd08276 80 KVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLK 159 (336)
T ss_pred CCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCC
Confidence 99999998631 1588999999999999999999999999999999999999998888999
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh---HHH-HhhhcCCCCCcEEE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE---LRN-ISRDASIPKPKLAL 288 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d---~~~-i~~~t~g~g~Dvvl 288 (405)
+|++|+|+| +|++|++++++|++.|++++++++++ ++.+.+.++|.+++++.++ +.. +.+.+++.++|+++
T Consensus 160 ~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i 234 (336)
T cd08276 160 PGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSD----EKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVV 234 (336)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEE
Confidence 999999996 59999999999999999998887553 3466677789999987643 455 78888888999999
Q ss_pred ECCCchhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcc
Q psy2960 289 NCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKL 368 (405)
Q Consensus 289 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 368 (405)
||+++.....++++++++|+++.+|.........+...++.+++++.++.... .+.++++.++++++.+
T Consensus 235 ~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~~~l 303 (336)
T cd08276 235 EVGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS-----------RAQFEAMNRAIEAHRI 303 (336)
T ss_pred ECCChHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc-----------HHHHHHHHHHHHcCCc
Confidence 99998888889999999999999996544333344556678999999987643 3457778889999998
Q ss_pred cCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 369 AAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 369 ~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
.+.+++.|++++++++|+.+. ++...+|+++++
T Consensus 304 ~~~~~~~~~~~~~~~a~~~~~--~~~~~~kvv~~~ 336 (336)
T cd08276 304 RPVIDRVFPFEEAKEAYRYLE--SGSHFGKVVIRV 336 (336)
T ss_pred ccccCcEEeHHHHHHHHHHHH--hCCCCceEEEeC
Confidence 877788999999999999998 788899999864
No 76
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=3e-39 Score=313.63 Aligned_cols=309 Identities=19% Similarity=0.291 Sum_probs=248.7
Q ss_pred ceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCC
Q psy2960 72 LANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSS 151 (405)
Q Consensus 72 ~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~ 151 (405)
+||+.++..++++ +++++.|.|++.++||+|||.++|||++|++.+.|.++. .+|.++|||++|+|+++|++++.
T Consensus 7 ~~~a~~~~~~~~~---~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~~--~~p~v~G~e~~G~V~~vG~~v~~ 81 (373)
T cd08299 7 KCKAAVLWEPKKP---FSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVT--PFPVILGHEAAGIVESVGEGVTT 81 (373)
T ss_pred eeEEEEEecCCCC---cEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCCC--CCCccccccceEEEEEeCCCCcc
Confidence 4889988887665 888999999999999999999999999999999987642 56899999999999999999999
Q ss_pred CCCCCEEEecCC-----------------------------------------------CCCcccceEeecccceEEcCC
Q psy2960 152 LAVGDHVIPDTQ-----------------------------------------------HLGTWRNYGKFNHDVLMKVPK 184 (405)
Q Consensus 152 ~~~GdrV~~~~~-----------------------------------------------~~G~~a~~~~v~~~~~~~iP~ 184 (405)
+++||+|++.+. ..|+|+||+.++...++++|+
T Consensus 82 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~ 161 (373)
T cd08299 82 VKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDA 161 (373)
T ss_pred CCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCC
Confidence 999999987520 248999999999999999999
Q ss_pred CCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHHcCC
Q psy2960 185 DIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGA 263 (405)
Q Consensus 185 ~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~-~v~~~~~~~~~~~~~~~~~~~lg~ 263 (405)
++++++++++++++.|||+++...+++++|++|||+|+ |++|++++++|+.+|+ +++++.++ +++++.++++|+
T Consensus 162 ~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~----~~~~~~a~~lGa 236 (373)
T cd08299 162 AAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIAVDIN----KDKFAKAKELGA 236 (373)
T ss_pred CCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC----HHHHHHHHHcCC
Confidence 99999999999999999999888789999999999975 9999999999999999 67777544 345788899999
Q ss_pred cEEeChhh----HHH-HhhhcCCCCCcEEEECCCc-hhHHHHHHh-cccCCEEEEEeccCCC-CcccCcccccccCeEEE
Q psy2960 264 DYVFTEEE----LRN-ISRDASIPKPKLALNCVGG-NSATNLLRT-LVSKGVMVTYGGMSRE-PVQIPTSAFIFKDITLR 335 (405)
Q Consensus 264 ~~v~~~~d----~~~-i~~~t~g~g~Dvvld~~g~-~~~~~~~~~-l~~~G~~v~~g~~~~~-~~~~~~~~~~~k~~~~~ 335 (405)
+++++..+ +.. +.+.+. +++|+++||+|+ ..+..++.. ++++|+++.+|..... ...++.. .+.++.++.
T Consensus 237 ~~~i~~~~~~~~~~~~v~~~~~-~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~ 314 (373)
T cd08299 237 TECINPQDYKKPIQEVLTEMTD-GGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPM-LLLTGRTWK 314 (373)
T ss_pred ceEecccccchhHHHHHHHHhC-CCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHH-HHhcCCeEE
Confidence 99998643 444 667766 589999999996 444565655 4679999999965332 2223322 234678899
Q ss_pred EEecchhhhhhccHHHHHHHHHHHHHHHHcCccc--CCcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 336 GHWMTRWQKENKESAERKSMMNELTEMMRTGKLA--APAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 336 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
+++...+.. .+.+.++++.+.++.++ +.++++|+++++++||+.+. +++ ..|+++++
T Consensus 315 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~--~~~-~~k~~~~~ 373 (373)
T cd08299 315 GAVFGGWKS--------KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLR--SGK-SIRTVLTF 373 (373)
T ss_pred EEEecCCcc--------HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHh--CCC-cceEEEeC
Confidence 887655321 23344566666666544 44678999999999999988 555 45888764
No 77
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=1.6e-39 Score=312.05 Aligned_cols=310 Identities=27% Similarity=0.334 Sum_probs=252.9
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||+++++.+| + ..+++++.|.|+|+++||+||+.++++|++|+....+.++ ..+|.++|||++|+|+.+|++++.+
T Consensus 1 m~a~~~~~~~-~-~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~--~~~~~~~g~e~~G~v~~vG~~v~~~ 76 (339)
T cd08249 1 QKAAVLTGPG-G-GLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFI--PSYPAILGCDFAGTVVEVGSGVTRF 76 (339)
T ss_pred CceEEeccCC-C-CcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeecccc--cCCCceeeeeeeEEEEEeCCCcCcC
Confidence 7899999886 3 3488999999999999999999999999999988766541 1357899999999999999999999
Q ss_pred CCCCEEEecCC-------CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCC----------CCCC
Q psy2960 153 AVGDHVIPDTQ-------HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSL----------SPGD 215 (405)
Q Consensus 153 ~~GdrV~~~~~-------~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~----------~~g~ 215 (405)
++||+|+++.. .+|+|++|+.++.+.++++|+++++++++.+++++.|||+++....++ ++|+
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~ 156 (339)
T cd08249 77 KVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGK 156 (339)
T ss_pred CCCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCC
Confidence 99999998742 248999999999999999999999999999999999999998766544 7999
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCCCCcEEEECCC
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIPKPKLALNCVG 292 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~g~Dvvld~~g 292 (405)
+|||+|++|++|++++++|+.+|++++++++ .+ +.+.++++|+++++++++ +.+ +++.++ +++|++||++|
T Consensus 157 ~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~~-~~----~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~-~~~d~vl~~~g 230 (339)
T cd08249 157 PVLIWGGSSSVGTLAIQLAKLAGYKVITTAS-PK----NFDLVKSLGADAVFDYHDPDVVEDIRAATG-GKLRYALDCIS 230 (339)
T ss_pred EEEEEcChhHHHHHHHHHHHHcCCeEEEEEC-cc----cHHHHHhcCCCEEEECCCchHHHHHHHhcC-CCeeEEEEeec
Confidence 9999999999999999999999999998873 33 356778899999988653 445 766664 67999999999
Q ss_pred c-hhHHHHHHhccc--CCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhh---hhccHHHHHHHHHHHHHHHHcC
Q psy2960 293 G-NSATNLLRTLVS--KGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQK---ENKESAERKSMMNELTEMMRTG 366 (405)
Q Consensus 293 ~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g 366 (405)
+ .....+++++++ +|+++.+|...... ....+.++.......+.. .. +......++++.++++++
T Consensus 231 ~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 301 (339)
T cd08249 231 TPESAQLCAEALGRSGGGKLVSLLPVPEET-------EPRKGVKVKFVLGYTVFGEIPED--REFGEVFWKYLPELLEEG 301 (339)
T ss_pred cchHHHHHHHHHhccCCCEEEEecCCCccc-------cCCCCceEEEEEeeeeccccccc--ccchHHHHHHHHHHHHcC
Confidence 8 777889999999 99999998554322 111233333333322211 11 123345688899999999
Q ss_pred cccCCcceeee--hhhHHHHHHHHhhhcCC-CCceEEEEe
Q psy2960 367 KLAAPAHKFVT--LKNFQEALMNTMSIQGK-SGVKYYIDF 403 (405)
Q Consensus 367 ~l~~~~~~~~~--~~~~~~A~~~~~~~~~~-~~gKvvl~~ 403 (405)
.+.+.+...++ ++++++||+.+. .++ ..+|+|+++
T Consensus 302 ~l~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~kvvv~~ 339 (339)
T cd08249 302 KLKPHPVRVVEGGLEGVQEGLDLLR--KGKVSGEKLVVRL 339 (339)
T ss_pred CccCCCceecCCcHHHHHHHHHHHH--CCCccceEEEEeC
Confidence 99987777788 999999999999 788 899999874
No 78
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.3e-39 Score=305.92 Aligned_cols=308 Identities=22% Similarity=0.313 Sum_probs=255.2
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++...+.+ ..+++.+.+.|.++++||+||+.++++|+.|++...|.++. ...|.++|||++|+|+++|. ..+
T Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~vG~--~~~ 76 (320)
T cd08243 1 MKAIVIEQPGGP-EVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPS-VKFPRVLGIEAVGEVEEAPG--GTF 76 (320)
T ss_pred CeEEEEcCCCCc-cceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCccccceeEEEEEEecC--CCC
Confidence 688899877654 34778888888899999999999999999999998886543 35678999999999999995 579
Q ss_pred CCCCEEEecCC-----CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHH
Q psy2960 153 AVGDHVIPDTQ-----HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACG 227 (405)
Q Consensus 153 ~~GdrV~~~~~-----~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG 227 (405)
++||+|+++.. ..|+|++|+.++...++++|+++++++++++++++.|||+++...+.+++|++|||+|++|++|
T Consensus 77 ~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g 156 (320)
T cd08243 77 TPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVG 156 (320)
T ss_pred CCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHH
Confidence 99999998742 2489999999999999999999999999999999999999998888899999999999999999
Q ss_pred HHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeCh-hhHHH-HhhhcCCCCCcEEEECCCchhHHHHHHhccc
Q psy2960 228 QNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTE-EELRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVS 305 (405)
Q Consensus 228 ~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~-~d~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~ 305 (405)
++++|+|+++|+++++++++++ +.+.++++|++++++. .++.+ +.+. ++++|+++||+|+.....+++++++
T Consensus 157 ~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~i~~~--~~~~d~vl~~~~~~~~~~~~~~l~~ 230 (320)
T cd08243 157 LAALKLAKALGATVTATTRSPE----RAALLKELGADEVVIDDGAIAEQLRAA--PGGFDKVLELVGTATLKDSLRHLRP 230 (320)
T ss_pred HHHHHHHHHcCCEEEEEeCCHH----HHHHHHhcCCcEEEecCccHHHHHHHh--CCCceEEEECCChHHHHHHHHHhcc
Confidence 9999999999999999886643 4677788999888753 23444 6666 6789999999999888889999999
Q ss_pred CCEEEEEeccCCCCc--ccCcccc--cccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhH
Q psy2960 306 KGVMVTYGGMSREPV--QIPTSAF--IFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNF 381 (405)
Q Consensus 306 ~G~~v~~g~~~~~~~--~~~~~~~--~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~ 381 (405)
+|+++.+|....... ....... +.+++++.++..... ....++.+.++++++.+++.+++.|+++++
T Consensus 231 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 301 (320)
T cd08243 231 GGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDV---------PQTPLQELFDFVAAGHLDIPPSKVFTFDEI 301 (320)
T ss_pred CCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhh---------hHHHHHHHHHHHHCCceecccccEEcHHHH
Confidence 999999986432211 1111111 257788877764321 134678888999999999878889999999
Q ss_pred HHHHHHHhhhcCCCCceEEE
Q psy2960 382 QEALMNTMSIQGKSGVKYYI 401 (405)
Q Consensus 382 ~~A~~~~~~~~~~~~gKvvl 401 (405)
++|++.+. +++..+|+|+
T Consensus 302 ~~a~~~~~--~~~~~~kvvv 319 (320)
T cd08243 302 VEAHAYME--SNRAFGKVVV 319 (320)
T ss_pred HHHHHHHH--hCCCCCcEEe
Confidence 99999998 8888999886
No 79
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=3.2e-39 Score=312.83 Aligned_cols=307 Identities=21% Similarity=0.322 Sum_probs=253.1
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
+|++++.+.+.+ +++++.|.|.++++||+||+.++++|++|++.+.|.++. .+|.++|||++|+|+++|++++.+
T Consensus 1 ~~a~~~~~~~~~---~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~--~~~~i~g~e~~G~V~~vG~~v~~~ 75 (365)
T cd05279 1 CKAAVLWEKGKP---LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPT--PLPVILGHEGAGIVESIGPGVTTL 75 (365)
T ss_pred CceeEEecCCCC---cEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCC--CCCcccccceeEEEEEeCCCcccC
Confidence 367788877665 889999999999999999999999999999999887653 467899999999999999999999
Q ss_pred CCCCEEEecCC-----------------------------------------------CCCcccceEeecccceEEcCCC
Q psy2960 153 AVGDHVIPDTQ-----------------------------------------------HLGTWRNYGKFNHDVLMKVPKD 185 (405)
Q Consensus 153 ~~GdrV~~~~~-----------------------------------------------~~G~~a~~~~v~~~~~~~iP~~ 185 (405)
++||+|++.+. ..|+|++|+.++.+.++++|++
T Consensus 76 ~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~ 155 (365)
T cd05279 76 KPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPD 155 (365)
T ss_pred CCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCC
Confidence 99999987521 1378999999999999999999
Q ss_pred CChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE
Q psy2960 186 IALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY 265 (405)
Q Consensus 186 ~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~ 265 (405)
+++++|+++++++.+||+++...+++++|++|||+|+ |++|++++|+|+.+|+++++++.+ .+++.+.++++|+++
T Consensus 156 ~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~a~~~a~~~G~~~v~~~~~---~~~~~~~~~~~g~~~ 231 (365)
T cd05279 156 APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSVIMGCKAAGASRIIAVDI---NKDKFEKAKQLGATE 231 (365)
T ss_pred CCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC---CHHHHHHHHHhCCCe
Confidence 9999999999999999999888889999999999975 999999999999999986555532 234577888999999
Q ss_pred EeChh----hHHH-HhhhcCCCCCcEEEECCCc-hhHHHHHHhcc-cCCEEEEEeccC-CCCcccCcccccccCeEEEEE
Q psy2960 266 VFTEE----ELRN-ISRDASIPKPKLALNCVGG-NSATNLLRTLV-SKGVMVTYGGMS-REPVQIPTSAFIFKDITLRGH 337 (405)
Q Consensus 266 v~~~~----d~~~-i~~~t~g~g~Dvvld~~g~-~~~~~~~~~l~-~~G~~v~~g~~~-~~~~~~~~~~~~~k~~~~~g~ 337 (405)
+++.+ ++.+ +.+.++ .++|++||++|. .....++++++ ++|+++.+|... .....++...+ .++.++.|.
T Consensus 232 ~v~~~~~~~~~~~~l~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~ 309 (365)
T cd05279 232 CINPRDQDKPIVEVLTEMTD-GGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGT 309 (365)
T ss_pred ecccccccchHHHHHHHHhC-CCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEE
Confidence 98764 3334 677774 689999999986 56677899999 999999998543 22334444455 677888887
Q ss_pred ecchhhhhhccHHHHHHHHHHHHHHHHcCcccC--CcceeeehhhHHHHHHHHhhhcCCCCceEEE
Q psy2960 338 WMTRWQKENKESAERKSMMNELTEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 401 (405)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl 401 (405)
+...+. ..+.+.+++++++++.+++ .++++|+++++++||+.+. +++. .|+++
T Consensus 310 ~~~~~~--------~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~--~~~~-~~~~~ 364 (365)
T cd05279 310 VFGGWK--------SKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMR--SGES-IRTIL 364 (365)
T ss_pred eccCCc--------hHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHh--CCCc-eeeee
Confidence 665432 2455788889999999885 3778999999999999988 6655 47665
No 80
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=8.7e-39 Score=306.39 Aligned_cols=319 Identities=19% Similarity=0.283 Sum_probs=262.1
Q ss_pred eeEEEEccCCCCcc--ceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCC
Q psy2960 73 ANKLVYNQHGTPLR--VVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVS 150 (405)
Q Consensus 73 ~~a~~~~~~g~~~~--~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~ 150 (405)
||++++++++++.+ .+.+++.|.|++.++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~v~ 79 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPV-PGQPKILGWDASGVVEAVGSEVT 79 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCC-CCCCcccccceEEEEEEcCCCCC
Confidence 68999999887631 4777788989999999999999999999999998887652 34678999999999999999999
Q ss_pred CCCCCCEEEecC--CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCC-----CCEEEEeCCC
Q psy2960 151 SLAVGDHVIPDT--QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSP-----GDVVIQNGAN 223 (405)
Q Consensus 151 ~~~~GdrV~~~~--~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~-----g~~VLI~ga~ 223 (405)
.|++||+|++.. ...|+|++|+.++...++++|+++++++++.+++++.|||+++...+.+++ |++|+|+|++
T Consensus 80 ~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~ 159 (336)
T cd08252 80 LFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGA 159 (336)
T ss_pred CCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCC
Confidence 999999999873 246899999999999999999999999999999999999999888788887 9999999999
Q ss_pred cHHHHHHHHHHHHcC-CcEEEEecCCcchHHHHHHHHHcCCcEEeChh-hHHH-HhhhcCCCCCcEEEECCCc-hhHHHH
Q psy2960 224 SACGQNVIQIARHWG-LKTINIVRNRDDIDKLKSYLKSLGADYVFTEE-ELRN-ISRDASIPKPKLALNCVGG-NSATNL 299 (405)
Q Consensus 224 G~vG~~aiqla~~~G-~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~-d~~~-i~~~t~g~g~Dvvld~~g~-~~~~~~ 299 (405)
|++|++++|+|+.+| +++++++++.+ +.+.++++|++++++.+ ++.. +... .++++|++|||+|+ .....+
T Consensus 160 g~vg~~~~~~a~~~G~~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~i~~~-~~~~~d~vl~~~~~~~~~~~~ 234 (336)
T cd08252 160 GGVGSIAIQLAKQLTGLTVIATASRPE----SIAWVKELGADHVINHHQDLAEQLEAL-GIEPVDYIFCLTDTDQHWDAM 234 (336)
T ss_pred chHHHHHHHHHHHcCCcEEEEEcCChh----hHHHHHhcCCcEEEeCCccHHHHHHhh-CCCCCCEEEEccCcHHHHHHH
Confidence 999999999999999 99999876543 36777889999999865 3444 5543 34689999999996 566778
Q ss_pred HHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhh-hhhccHHHHHHHHHHHHHHHHcCcccCCcc---ee
Q psy2960 300 LRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQ-KENKESAERKSMMNELTEMMRTGKLAAPAH---KF 375 (405)
Q Consensus 300 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~---~~ 375 (405)
+++++++|+++.+|... ..++...++.+++++.+.++.... ...+.+....+.++++.+++.+|.+++.+. ..
T Consensus 235 ~~~l~~~g~~v~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 311 (336)
T cd08252 235 AELIAPQGHICLIVDPQ---EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGP 311 (336)
T ss_pred HHHhcCCCEEEEecCCC---CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecC
Confidence 99999999999998542 234444444688999887654311 111112344577899999999999997543 34
Q ss_pred eehhhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 376 VTLKNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 376 ~~~~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
++++++++||+.+. ++...+|++++
T Consensus 312 ~~~~~~~~a~~~~~--~~~~~~~vv~~ 336 (336)
T cd08252 312 INAENLREAHALLE--SGKTIGKIVLE 336 (336)
T ss_pred CCHHHHHHHHHHHH--cCCccceEEeC
Confidence 79999999999999 88889999874
No 81
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=7.3e-39 Score=307.89 Aligned_cols=304 Identities=23% Similarity=0.356 Sum_probs=250.9
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||+|++++++. +.+++.|.|++.+++|+|||.++++|+.|+.++.|.++ ....|.++|+|++|+|+++|++++.+
T Consensus 1 ~~~~~~~~~~~----~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~-~~~~~~~~g~~~~G~V~~~G~~v~~~ 75 (343)
T cd08235 1 MKAAVLHGPND----VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHEIAGEIVEVGDGVTGF 75 (343)
T ss_pred CeEEEEecCCc----eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc-cCCCCcccccceEEEEEeeCCCCCCC
Confidence 68999988764 88999999999999999999999999999999888664 23457899999999999999999999
Q ss_pred CCCCEEEecCC--------------------------CCCcccceEeecccc-----eEEcCCCCChhhhccCCCcHHHH
Q psy2960 153 AVGDHVIPDTQ--------------------------HLGTWRNYGKFNHDV-----LMKVPKDIALTEISGITSNPCTA 201 (405)
Q Consensus 153 ~~GdrV~~~~~--------------------------~~G~~a~~~~v~~~~-----~~~iP~~~s~~~Aa~~~~~~~ta 201 (405)
++||+|++.+. ..|+|++|+.++... ++++|+++++++|+.+ ..+.+|
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a 154 (343)
T cd08235 76 KVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACC 154 (343)
T ss_pred CCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHH
Confidence 99999998621 358999999999998 9999999999999876 788999
Q ss_pred HHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-Hhh
Q psy2960 202 YRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISR 277 (405)
Q Consensus 202 ~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~ 277 (405)
|+++.. .++++|++|||+|+ |++|++++|+|+..|++ +++++++.+ +.+.++++|.++++++++ +.+ +.+
T Consensus 155 ~~~l~~-~~~~~g~~VlV~g~-g~vg~~~~~la~~~g~~~v~~~~~s~~----~~~~~~~~g~~~~~~~~~~~~~~~i~~ 228 (343)
T cd08235 155 INAQRK-AGIKPGDTVLVIGA-GPIGLLHAMLAKASGARKVIVSDLNEF----RLEFAKKLGADYTIDAAEEDLVEKVRE 228 (343)
T ss_pred HHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHH----HHHHHHHhCCcEEecCCccCHHHHHHH
Confidence 999965 58999999999974 99999999999999999 777765543 355667889999988654 444 777
Q ss_pred hcCCCCCcEEEECCCch-hHHHHHHhcccCCEEEEEeccCCC-CcccCcccccccCeEEEEEecchhhhhhccHHHHHHH
Q psy2960 278 DASIPKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSRE-PVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSM 355 (405)
Q Consensus 278 ~t~g~g~Dvvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~ 355 (405)
.+.+.++|+++||+++. ....++++++++|+++.+|..... ...++......+++++.+++... .+.
T Consensus 229 ~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~ 297 (343)
T cd08235 229 LTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAAS-----------PED 297 (343)
T ss_pred HhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCC-----------hhh
Confidence 77788899999999965 667789999999999999864332 12333344556778877765332 234
Q ss_pred HHHHHHHHHcCcccC--CcceeeehhhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 356 MNELTEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 356 ~~~~~~~~~~g~l~~--~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
++.++++++++.+++ .+..+|+++++.+|++.+. +++ .+|+|++
T Consensus 298 ~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~--~~~-~~k~vi~ 343 (343)
T cd08235 298 YKEALELIASGKIDVKDLITHRFPLEDIEEAFELAA--DGK-SLKIVIT 343 (343)
T ss_pred HHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHh--CCC-cEEEEeC
Confidence 677889999999874 3667899999999999999 888 9999974
No 82
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=8.5e-39 Score=307.19 Aligned_cols=305 Identities=20% Similarity=0.286 Sum_probs=246.3
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCC----------CCCCCCCCCccceEEEE
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYP----------IKPTLPAVPGFEGVGEV 142 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----------~~~~~p~~lG~E~~G~V 142 (405)
||++++.++ + +++++.|.|+++++||+|||.++++|+.|++...|... ....+|.++|+|++|+|
T Consensus 1 m~a~~~~~~--~---~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V 75 (341)
T cd08262 1 MRAAVFRDG--P---LVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEV 75 (341)
T ss_pred CceEEEeCC--c---eEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEE
Confidence 688998765 2 88999999999999999999999999999999887321 11235789999999999
Q ss_pred EEEcCCCCC-CCCCCEEEecCC----------------CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHH
Q psy2960 143 VEVGSDVSS-LAVGDHVIPDTQ----------------HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRML 205 (405)
Q Consensus 143 ~~vG~~v~~-~~~GdrV~~~~~----------------~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al 205 (405)
+++|+++++ |++||+|++.+. ..|+|++|+.++.+.++++|+++++++++ ++.++++||+++
T Consensus 76 ~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~ 154 (341)
T cd08262 76 VDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV 154 (341)
T ss_pred EEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH
Confidence 999999997 999999998731 35899999999999999999999999887 667889999996
Q ss_pred HhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhH------HHHhhhc
Q psy2960 206 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEEL------RNISRDA 279 (405)
Q Consensus 206 ~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~------~~i~~~t 279 (405)
..+++++|++|||+|+ |++|++++|+|+.+|+++++++++. +++.+.++++|+++++++++. ..+.+.+
T Consensus 155 -~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~---~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~ 229 (341)
T cd08262 155 -RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASDFS---PERRALALAMGADIVVDPAADSPFAAWAAELARA 229 (341)
T ss_pred -HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCC---HHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHh
Confidence 6689999999999976 9999999999999999977776443 455778889999989885421 1234455
Q ss_pred CCCCCcEEEECCCch-hHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHH
Q psy2960 280 SIPKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNE 358 (405)
Q Consensus 280 ~g~g~Dvvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 358 (405)
.+.++|++|||+|+. ....++++++++|+++.+|...... .........+++++.++.... .+.+.+
T Consensus 230 ~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 297 (341)
T cd08262 230 GGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESD-NIEPALAIRKELTLQFSLGYT-----------PEEFAD 297 (341)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCC-ccCHHHHhhcceEEEEEeccc-----------HHHHHH
Confidence 667899999999984 5677899999999999998543221 122222234777777654321 235778
Q ss_pred HHHHHHcCcccCC--cceeeehhhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 359 LTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 359 ~~~~~~~g~l~~~--~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
+++++++|.+.+. ++++|+++++++||+.+. +++..||+|++
T Consensus 298 ~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~--~~~~~~kvvv~ 341 (341)
T cd08262 298 ALDALAEGKVDVAPMVTGTVGLDGVPDAFEALR--DPEHHCKILVD 341 (341)
T ss_pred HHHHHHcCCCChHHheEEEeeHHHHHHHHHHHh--cCCCceEEEeC
Confidence 8899999999864 478999999999999999 88899999974
No 83
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=9e-39 Score=303.31 Aligned_cols=320 Identities=23% Similarity=0.344 Sum_probs=267.9
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++.+++.+ ..+++.+.+.|.+.++|++||+.++++|+.|++...|.++....+|.++|||++|+|+++|+++..+
T Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~ 79 (323)
T cd05276 1 MKAIVIKEPGGP-EVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGW 79 (323)
T ss_pred CeEEEEecCCCc-ccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCC
Confidence 799999987765 4477888888888999999999999999999999888765444568899999999999999999999
Q ss_pred CCCCEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHH
Q psy2960 153 AVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQ 232 (405)
Q Consensus 153 ~~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiq 232 (405)
++||+|+++. ..|+|++|+.++.+.++++|++++++++++++.++.++|+++...+.+.+|++|+|+|++|++|+++++
T Consensus 80 ~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~ 158 (323)
T cd05276 80 KVGDRVCALL-AGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQ 158 (323)
T ss_pred CCCCEEEEec-CCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHH
Confidence 9999999883 358999999999999999999999999999999999999999887899999999999999999999999
Q ss_pred HHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEE
Q psy2960 233 IARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVM 309 (405)
Q Consensus 233 la~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~ 309 (405)
+++..|++++.+.++. .+.+.++++|++.+++... +.. +.+.+.+.++|+++|+.|+.....++++++++|++
T Consensus 159 ~~~~~g~~v~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g~~ 234 (323)
T cd05276 159 LAKALGARVIATAGSE----EKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRL 234 (323)
T ss_pred HHHHcCCEEEEEcCCH----HHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhccCCEE
Confidence 9999999988887553 3466677889888887543 444 66677677899999999998888889999999999
Q ss_pred EEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHHh
Q psy2960 310 VTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTM 389 (405)
Q Consensus 310 v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~ 389 (405)
+.+|.........+...++.+++++.++........ ..+....+.+.++.+++.++.+++.+++.|+++++++|++.+.
T Consensus 235 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 313 (323)
T cd05276 235 VLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLE-EKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRME 313 (323)
T ss_pred EEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhh-ccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHH
Confidence 999865433333444445568999999876543111 1124455677888899999999887889999999999999998
Q ss_pred hhcCCCCceEEE
Q psy2960 390 SIQGKSGVKYYI 401 (405)
Q Consensus 390 ~~~~~~~gKvvl 401 (405)
++...+|+++
T Consensus 314 --~~~~~~kvv~ 323 (323)
T cd05276 314 --SNEHIGKIVL 323 (323)
T ss_pred --hCCCcceEeC
Confidence 7777889874
No 84
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.4e-38 Score=306.27 Aligned_cols=306 Identities=23% Similarity=0.314 Sum_probs=252.5
Q ss_pred eeEEEEccCCCCccceEeeeecCCCC-CCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSV-QKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSS 151 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~-~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~ 151 (405)
||++++++++. +++++.|.|+| .++||+|||.++++|++|+..+.|.++.. .+|.++|||++|+|+++|++++.
T Consensus 1 m~a~~~~~~~~----~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~V~~~G~~v~~ 75 (345)
T cd08286 1 MKALVYHGPGK----ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTV-TPGRILGHEGVGVVEEVGSAVTN 75 (345)
T ss_pred CceEEEecCCc----eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCC-CCCceecccceEEEEEeccCccc
Confidence 78999998775 88999999986 89999999999999999999999876542 45889999999999999999999
Q ss_pred CCCCCEEEecCC---------------------------CCCcccceEeeccc--ceEEcCCCCChhhhccCCCcHHHHH
Q psy2960 152 LAVGDHVIPDTQ---------------------------HLGTWRNYGKFNHD--VLMKVPKDIALTEISGITSNPCTAY 202 (405)
Q Consensus 152 ~~~GdrV~~~~~---------------------------~~G~~a~~~~v~~~--~~~~iP~~~s~~~Aa~~~~~~~ta~ 202 (405)
+++||+|++.+. ..|+|++|+.++.+ .++++|+++++++++.++++++|||
T Consensus 76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~ 155 (345)
T cd08286 76 FKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGY 155 (345)
T ss_pred cCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHH
Confidence 999999987531 13889999999987 8999999999999999999999999
Q ss_pred HHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcC-CcEEEEecCCcchHHHHHHHHHcCCcEEeChh--hHHH-Hhhh
Q psy2960 203 RMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWG-LKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRD 278 (405)
Q Consensus 203 ~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G-~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~--d~~~-i~~~ 278 (405)
+++...+++++|++|||.|+ |++|++++|+|+.+| .+++++. +. +.+.+.++++|++.+++++ ++.. +.+.
T Consensus 156 ~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~-~~---~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~ 230 (345)
T cd08286 156 ECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVD-LD---DNRLEVAKKLGATHTVNSAKGDAIEQVLEL 230 (345)
T ss_pred HHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc-CC---HHHHHHHHHhCCCceeccccccHHHHHHHH
Confidence 98777789999999999886 999999999999999 5666643 32 3456778899999999865 3444 7777
Q ss_pred cCCCCCcEEEECCCch-hHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHH
Q psy2960 279 ASIPKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMN 357 (405)
Q Consensus 279 t~g~g~Dvvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~ 357 (405)
+.+.++|++|||+|+. ....++++++++|+++.+|.... ...++...++.+++++.+.... .+.++
T Consensus 231 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~------------~~~~~ 297 (345)
T cd08286 231 TDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK-PVDLHLEKLWIKNITITTGLVD------------TNTTP 297 (345)
T ss_pred hCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC-CCCcCHHHHhhcCcEEEeecCc------------hhhHH
Confidence 7778899999999864 44567899999999999985332 3344555556789999875432 13467
Q ss_pred HHHHHHHcCcccCC--cceeeehhhHHHHHHHHhhhcCC--CCceEEEEe
Q psy2960 358 ELTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGK--SGVKYYIDF 403 (405)
Q Consensus 358 ~~~~~~~~g~l~~~--~~~~~~~~~~~~A~~~~~~~~~~--~~gKvvl~~ 403 (405)
++.+++++|.+++. ++++|+++++++||+.+. ... ...|+||++
T Consensus 298 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~--~~~~~~~~k~~~~~ 345 (345)
T cd08286 298 MLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFS--AAAKHKALKVIIDF 345 (345)
T ss_pred HHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHh--ccCCCCeeEEEEeC
Confidence 78889999998764 578999999999999988 553 456999874
No 85
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=2e-38 Score=301.45 Aligned_cols=318 Identities=25% Similarity=0.362 Sum_probs=268.3
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||+++++.++.+ ..+.+.+.|.|.+.+++|+|++.++++|++|+....|.++.....|.++|||++|+|+++|+++++|
T Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (325)
T cd08253 1 MRAIRYHEFGAP-DVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGL 79 (325)
T ss_pred CceEEEcccCCc-ccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCC
Confidence 688888887654 4478889999999999999999999999999998888665444678899999999999999999999
Q ss_pred CCCCEEEecCC----CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHH
Q psy2960 153 AVGDHVIPDTQ----HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQ 228 (405)
Q Consensus 153 ~~GdrV~~~~~----~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~ 228 (405)
++||+|++... ..|++++|+.++.+.++++|+++++++++++++++.+||+++...+++++|++|+|+|++|++|+
T Consensus 80 ~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~ 159 (325)
T cd08253 80 KVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGH 159 (325)
T ss_pred CCCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHH
Confidence 99999998742 25899999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCCCCcEEEECCCchhHHHHHHhccc
Q psy2960 229 NVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVS 305 (405)
Q Consensus 229 ~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~ 305 (405)
+++++++..|+++++++++. ++.+.++++|++++++..+ +.. +.+.+.+.++|+++||.|+......++++++
T Consensus 160 ~~~~~a~~~g~~v~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~ 235 (325)
T cd08253 160 AAVQLARWAGARVIATASSA----EGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAP 235 (325)
T ss_pred HHHHHHHHcCCEEEEEeCCH----HHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHHHhhCC
Confidence 99999999999999887654 3456677889988887543 444 6677777789999999999888888999999
Q ss_pred CCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHH
Q psy2960 306 KGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEAL 385 (405)
Q Consensus 306 ~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~ 385 (405)
+|+++.+|... ....++...++.++.++.+...... .+....+.++.+.+++.++.+++.++.+|+++++++++
T Consensus 236 ~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 309 (325)
T cd08253 236 GGRIVVYGSGG-LRGTIPINPLMAKEASIRGVLLYTA-----TPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAH 309 (325)
T ss_pred CCEEEEEeecC-CcCCCChhHHHhcCceEEeeehhhc-----CHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHH
Confidence 99999998644 2233444444567888877764321 12455667888889999999988888999999999999
Q ss_pred HHHhhhcCCCCceEEEEe
Q psy2960 386 MNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 386 ~~~~~~~~~~~gKvvl~~ 403 (405)
+.+. ++...||+++++
T Consensus 310 ~~~~--~~~~~~kvv~~~ 325 (325)
T cd08253 310 EAVE--SGGAIGKVVLDP 325 (325)
T ss_pred HHHH--cCCCcceEEEeC
Confidence 9999 788899999864
No 86
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=3.5e-38 Score=298.84 Aligned_cols=317 Identities=23% Similarity=0.293 Sum_probs=264.6
Q ss_pred eEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCCC
Q psy2960 74 NKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSLA 153 (405)
Q Consensus 74 ~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~ 153 (405)
+|+.+..++.+ ..+.+.+.+.|.+.++||+|+|.++++|++|++...|.++. .+|.++|||++|+|+.+|+++++++
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~--~~~~~~g~e~~G~v~~~g~~~~~~~ 77 (320)
T cd05286 1 KAVRIHKTGGP-EVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL--PLPFVLGVEGAGVVEAVGPGVTGFK 77 (320)
T ss_pred CeEEEecCCCc-cceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC--CCCccCCcceeEEEEEECCCCCCCC
Confidence 35666655544 34677788877889999999999999999999998887653 4578999999999999999999999
Q ss_pred CCCEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHH
Q psy2960 154 VGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQI 233 (405)
Q Consensus 154 ~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiql 233 (405)
+||+|+++. ..|+|++|+.++.+.++++|+++++++++.+++.++++|+++...+++++|++|||+|++|++|++++++
T Consensus 78 ~G~~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~ 156 (320)
T cd05286 78 VGDRVAYAG-PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQW 156 (320)
T ss_pred CCCEEEEec-CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHH
Confidence 999999873 2589999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEE
Q psy2960 234 ARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMV 310 (405)
Q Consensus 234 a~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v 310 (405)
|+.+|++++++++++ ++.+.++++|++++++.++ +.. +.+.+.+.++|+++||+++.....++++++++|+++
T Consensus 157 a~~~g~~v~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v 232 (320)
T cd05286 157 AKALGATVIGTVSSE----EKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLV 232 (320)
T ss_pred HHHcCCEEEEEcCCH----HHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccCcEEE
Confidence 999999999987553 3467778899999887653 444 777777889999999999987788899999999999
Q ss_pred EEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHHhh
Q psy2960 311 TYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMS 390 (405)
Q Consensus 311 ~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~ 390 (405)
.+|........++...+..+++++.+.....+. ..+....+.+.++.+++.++.+.+.+++.|+++++++||+.+.
T Consensus 233 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~- 308 (320)
T cd05286 233 SFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYI---ATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLE- 308 (320)
T ss_pred EEecCCCCCCccCHHHHHhcCcEEEEEehhhhc---CCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHHHH-
Confidence 998644322223333333688888876654433 1235566778889999999999887888999999999999999
Q ss_pred hcCCCCceEEEEe
Q psy2960 391 IQGKSGVKYYIDF 403 (405)
Q Consensus 391 ~~~~~~gKvvl~~ 403 (405)
.+...+|+|+++
T Consensus 309 -~~~~~~~vv~~~ 320 (320)
T cd05286 309 -SRKTTGKLLLIP 320 (320)
T ss_pred -cCCCCceEEEeC
Confidence 788899999864
No 87
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=2.5e-38 Score=303.24 Aligned_cols=313 Identities=24% Similarity=0.340 Sum_probs=262.7
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++...+.+ ..+++.+.+.|.+.+++|+|++.++++|++|++...|..+....+|.++|||++|+|+.+|++++.+
T Consensus 1 ~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (342)
T cd08266 1 MKAVVIRGHGGP-EVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNV 79 (342)
T ss_pred CeEEEEecCCCc-cceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCC
Confidence 688998865544 3478888888889999999999999999999999988655334568899999999999999999999
Q ss_pred CCCCEEEecCC--------------------------CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHH
Q psy2960 153 AVGDHVIPDTQ--------------------------HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLK 206 (405)
Q Consensus 153 ~~GdrV~~~~~--------------------------~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~ 206 (405)
++||+|++.+. ..|++++|+.++.+.++++|+++++++++++++++.+||+++.
T Consensus 80 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~ 159 (342)
T cd08266 80 KPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLV 159 (342)
T ss_pred CCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHH
Confidence 99999998621 2588999999999999999999999999999999999999988
Q ss_pred hhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCCC
Q psy2960 207 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIPK 283 (405)
Q Consensus 207 ~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~g 283 (405)
...++++|++|+|+|+++++|++++++++..|++++.++++.+ +.+.+..++.+.+++..+ +.. +.+.+.+.+
T Consensus 160 ~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (342)
T cd08266 160 TRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSED----KLERAKELGADYVIDYRKEDFVREVRELTGKRG 235 (342)
T ss_pred HhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHcCCCeEEecCChHHHHHHHHHhCCCC
Confidence 8889999999999999999999999999999999988875543 356667788887776543 434 666666678
Q ss_pred CcEEEECCCchhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHH
Q psy2960 284 PKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMM 363 (405)
Q Consensus 284 ~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (405)
+|+++|++|+......+++++++|+++.+|.........+....+.+++++.+..... ...+..+.+++
T Consensus 236 ~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l 304 (342)
T cd08266 236 VDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGT-----------KAELDEALRLV 304 (342)
T ss_pred CcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCC-----------HHHHHHHHHHH
Confidence 9999999999888889999999999999986544333344334567888998877543 23577788999
Q ss_pred HcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 364 RTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 364 ~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
+++.+++.+++.|+++++++||+.+. ++...+|+++++
T Consensus 305 ~~~~l~~~~~~~~~~~~~~~a~~~~~--~~~~~~kvv~~~ 342 (342)
T cd08266 305 FRGKLKPVIDSVFPLEEAAEAHRRLE--SREQFGKIVLTP 342 (342)
T ss_pred HcCCcccceeeeEcHHHHHHHHHHHH--hCCCCceEEEeC
Confidence 99999888889999999999999998 778889999864
No 88
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.8e-38 Score=304.33 Aligned_cols=308 Identities=22% Similarity=0.304 Sum_probs=260.1
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++..++++. +.+.+.|.|.++++||+|++.++++|+.|+....|.++....+|.++|+|++|+|+.+|++++.+
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~ 78 (338)
T cd08254 1 MKAWRFHKGSKGL--LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNF 78 (338)
T ss_pred CeeEEEecCCCCc--eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccC
Confidence 7999999998863 67888999999999999999999999999999998776444567899999999999999999999
Q ss_pred CCCCEEEecC--------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHH
Q psy2960 153 AVGDHVIPDT--------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLK 206 (405)
Q Consensus 153 ~~GdrV~~~~--------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~ 206 (405)
++||+|++.+ ...|+|++|+.++.+.++++|+++++++++.++.+++|||+++.
T Consensus 79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~ 158 (338)
T cd08254 79 KVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVV 158 (338)
T ss_pred CCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHH
Confidence 9999998610 12489999999999999999999999999999999999999998
Q ss_pred hhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCCC
Q psy2960 207 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIPK 283 (405)
Q Consensus 207 ~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~g 283 (405)
....+++|++|||.|+ |++|++++++|+.+|+++++++++. .+.+.++++|.+++++.++ ... + +.+.+++
T Consensus 159 ~~~~~~~~~~vli~g~-g~vG~~~~~la~~~G~~V~~~~~s~----~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~ 232 (338)
T cd08254 159 RAGEVKPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVDIKE----EKLELAKELGADEVLNSLDDSPKDKK-AAGLGGG 232 (338)
T ss_pred hccCCCCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEcCCH----HHHHHHHHhCCCEEEcCCCcCHHHHH-HHhcCCC
Confidence 8888999999999865 8999999999999999988887553 3467778899999887653 333 5 5666788
Q ss_pred CcEEEECCCch-hHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHH
Q psy2960 284 PKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEM 362 (405)
Q Consensus 284 ~Dvvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (405)
+|+++||+|.. ....++++|+++|+++.+|.... ...++...++.++.++.+++... .+.++.+.++
T Consensus 233 ~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l 300 (338)
T cd08254 233 FDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRD-KLTVDLSDLIARELRIIGSFGGT-----------PEDLPEVLDL 300 (338)
T ss_pred ceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCC-CCccCHHHHhhCccEEEEeccCC-----------HHHHHHHHHH
Confidence 99999999864 56678999999999999985332 23344455677888888865432 3457888899
Q ss_pred HHcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 363 MRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 363 ~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
+++|.+++. .++|+++++++|++.+. +++..||+|+++
T Consensus 301 l~~~~l~~~-~~~~~~~~~~~a~~~~~--~~~~~~kvv~~~ 338 (338)
T cd08254 301 IAKGKLDPQ-VETRPLDEIPEVLERLH--KGKVKGRVVLVP 338 (338)
T ss_pred HHcCCCccc-ceeEcHHHHHHHHHHHH--cCCccceEEEeC
Confidence 999999876 78899999999999999 889999999875
No 89
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.3e-38 Score=300.30 Aligned_cols=317 Identities=21% Similarity=0.329 Sum_probs=266.0
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++.+++.+ +.+++++.+.|.+.+++|+|++.++++|++|+....|.+......|.++|||++|+|+.+|+++.+|
T Consensus 1 ~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (326)
T cd08272 1 MKALVLESFGGP-EVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRF 79 (326)
T ss_pred CeEEEEccCCCc-hheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCC
Confidence 789999988876 3478888888889999999999999999999999888655334568899999999999999999999
Q ss_pred CCCCEEEecCC----CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHH
Q psy2960 153 AVGDHVIPDTQ----HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQ 228 (405)
Q Consensus 153 ~~GdrV~~~~~----~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~ 228 (405)
++||+|+++.. ..|+|++|+.++...++++|+++++.+++.++..+.+||+++.+.+++++|++|+|+|++|++|+
T Consensus 80 ~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~ 159 (326)
T cd08272 80 RVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGH 159 (326)
T ss_pred CCCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHH
Confidence 99999998731 25899999999999999999999999999999999999999888889999999999999999999
Q ss_pred HHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh-HHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccC
Q psy2960 229 NVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE-LRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSK 306 (405)
Q Consensus 229 ~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d-~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~ 306 (405)
+++++|+.+|+++++++++ + +.+.++++|.+.+++... +.. +.+.+.+.++|+++||+|+.....++++++++
T Consensus 160 ~~~~~a~~~g~~v~~~~~~-~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~ 234 (326)
T cd08272 160 VAVQLAKAAGARVYATASS-E----KAAFARSLGADPIIYYRETVVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVALY 234 (326)
T ss_pred HHHHHHHHcCCEEEEEech-H----HHHHHHHcCCCEEEecchhHHHHHHHhcCCCCCcEEEECCChHHHHHHHHHhccC
Confidence 9999999999999988754 3 356778899988887543 444 77788788999999999998777889999999
Q ss_pred CEEEEEeccCCCCcccCcccccccCeEEEEEecch--hhhhhccHHHHHHHHHHHHHHHHcCcccCCcc-eeeehhhHHH
Q psy2960 307 GVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTR--WQKENKESAERKSMMNELTEMMRTGKLAAPAH-KFVTLKNFQE 383 (405)
Q Consensus 307 G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~-~~~~~~~~~~ 383 (405)
|+++.+|... .. .......+++++.++.+.. ... ..+....+.++.+.+++.++.+++.++ +.|+++++++
T Consensus 235 g~~v~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 308 (326)
T cd08272 235 GRVVSILGGA--TH--DLAPLSFRNATYSGVFTLLPLLTG--EGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAA 308 (326)
T ss_pred CEEEEEecCC--cc--chhhHhhhcceEEEEEcccccccc--cchhhHHHHHHHHHHHHHCCCcccccccceecHHHHHH
Confidence 9999998543 11 2222236788888877543 211 122455678899999999999987655 8999999999
Q ss_pred HHHHHhhhcCCCCceEEEEe
Q psy2960 384 ALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 384 A~~~~~~~~~~~~gKvvl~~ 403 (405)
+|+.+. +++..+|+++++
T Consensus 309 ~~~~~~--~~~~~~~vv~~~ 326 (326)
T cd08272 309 AHARLE--SGSARGKIVIDV 326 (326)
T ss_pred HHHHHH--cCCcccEEEEEC
Confidence 999998 778889999874
No 90
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=1.9e-38 Score=302.68 Aligned_cols=298 Identities=27% Similarity=0.396 Sum_probs=246.3
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++..++ + +.+++++.+.|+++++||+||+.++++|++|++...+. +. ..+|.++|||++|+|+.+|++++.|
T Consensus 1 ~~~~~~~~~~-~-~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~-~~~~~~~g~e~~G~v~~vG~~v~~~ 76 (325)
T cd08264 1 MKALVFEKSG-I-ENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KV-KPMPHIPGAEFAGVVEEVGDHVKGV 76 (325)
T ss_pred CeeEEeccCC-C-CceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CC-CCCCeecccceeEEEEEECCCCCCC
Confidence 7899998776 2 44888888988899999999999999999999887752 21 2357799999999999999999999
Q ss_pred CCCCEEEecCC--------------------------CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHH
Q psy2960 153 AVGDHVIPDTQ--------------------------HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLK 206 (405)
Q Consensus 153 ~~GdrV~~~~~--------------------------~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~ 206 (405)
++||+|++.+. ..|+|++|+.++.+.++++|+++++++++.+++++.|||+++.
T Consensus 77 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~ 156 (325)
T cd08264 77 KKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALK 156 (325)
T ss_pred CCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHH
Confidence 99999997521 2589999999999999999999999999999999999999997
Q ss_pred hhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHH-HhhhcCCCCCc
Q psy2960 207 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPK 285 (405)
Q Consensus 207 ~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~-i~~~t~g~g~D 285 (405)
. +++++|++|+|+|++|++|++++++|+++|++++++++ .+.++++|++++++.++..+ +.+.+ +++|
T Consensus 157 ~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~--------~~~~~~~g~~~~~~~~~~~~~l~~~~--~~~d 225 (325)
T cd08264 157 T-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR--------KDWLKEFGADEVVDYDEVEEKVKEIT--KMAD 225 (325)
T ss_pred h-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH--------HHHHHHhCCCeeecchHHHHHHHHHh--CCCC
Confidence 6 89999999999999999999999999999999888762 25567899999998776544 66666 6899
Q ss_pred EEEECCCchhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHc
Q psy2960 286 LALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRT 365 (405)
Q Consensus 286 vvld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (405)
+|+||+|+.....++++++++|+++.+|........++...++.++.++.+...+. .+.+.++++++..
T Consensus 226 ~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~ 294 (325)
T cd08264 226 VVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGT-----------RKELLELVKIAKD 294 (325)
T ss_pred EEEECCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCC-----------HHHHHHHHHHHHc
Confidence 99999999877889999999999999986422223445555666777887765432 2346667777754
Q ss_pred CcccCCcceeeehhhHHHHHHHHhhhcCCCCceEE
Q psy2960 366 GKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYY 400 (405)
Q Consensus 366 g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvv 400 (405)
.. ..+.+.|+++++++||+.+. ++.+.+|++
T Consensus 295 ~~--~~~~~~~~~~~~~~a~~~~~--~~~~~~kv~ 325 (325)
T cd08264 295 LK--VKVWKTFKLEEAKEALKELF--SKERDGRIL 325 (325)
T ss_pred CC--ceeEEEEcHHHHHHHHHHHH--cCCCccccC
Confidence 43 44678999999999999998 777788763
No 91
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=1.6e-38 Score=305.62 Aligned_cols=303 Identities=24% Similarity=0.306 Sum_probs=249.6
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCC-CCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQ-KHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSS 151 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~-~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~ 151 (405)
||++++.+++. +++++.|.|+|. ++||+|++.++++|+.|++...|.++. .+|.++|+|++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~----~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~ 74 (344)
T cd08284 1 MKAVVFKGPGD----VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPS--TPGFVLGHEFVGEVVEVGPEVRT 74 (344)
T ss_pred CeeEEEecCCC----ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCC--CCCcccccceEEEEEeeCCCccc
Confidence 68999987643 889999999985 999999999999999999998887653 45789999999999999999999
Q ss_pred CCCCCEEEecCC------------------------------CCCcccceEeeccc--ceEEcCCCCChhhhccCCCcHH
Q psy2960 152 LAVGDHVIPDTQ------------------------------HLGTWRNYGKFNHD--VLMKVPKDIALTEISGITSNPC 199 (405)
Q Consensus 152 ~~~GdrV~~~~~------------------------------~~G~~a~~~~v~~~--~~~~iP~~~s~~~Aa~~~~~~~ 199 (405)
+++||+|++.+. ..|+|++|+.++.. .++++|+++++++|++++++++
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ 154 (344)
T cd08284 75 LKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILP 154 (344)
T ss_pred cCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchH
Confidence 999999998531 14899999999975 9999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHHcCCcEEeCh--hhHHH-H
Q psy2960 200 TAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTE--EELRN-I 275 (405)
Q Consensus 200 ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~-~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~--~d~~~-i 275 (405)
|||+++.. +.+++|++|||+| +|++|++++|+|+.+|+ +++++.++ +++.+.++++|+. +++. .++.. +
T Consensus 155 ta~~~~~~-~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~----~~~~~~~~~~g~~-~~~~~~~~~~~~l 227 (344)
T cd08284 155 TGYFGAKR-AQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPV----PERLERAAALGAE-PINFEDAEPVERV 227 (344)
T ss_pred HHHhhhHh-cCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCC----HHHHHHHHHhCCe-EEecCCcCHHHHH
Confidence 99999965 7899999999997 59999999999999997 67777433 3446777889976 3443 34555 7
Q ss_pred hhhcCCCCCcEEEECCCc-hhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHH
Q psy2960 276 SRDASIPKPKLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKS 354 (405)
Q Consensus 276 ~~~t~g~g~Dvvld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~ 354 (405)
.+.+++.++|++|||+|+ .....++++++++|+++.+|.........+....+.+++++.+... ...+
T Consensus 228 ~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 296 (344)
T cd08284 228 REATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRC-----------PVRS 296 (344)
T ss_pred HHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecC-----------Ccch
Confidence 778878899999999996 4567789999999999999965433333444455678888875421 1245
Q ss_pred HHHHHHHHHHcCcccCC--cceeeehhhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 355 MMNELTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 355 ~~~~~~~~~~~g~l~~~--~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
.+++++++++++.+++. ++++|+++++++||+.+. +++. +|+|++
T Consensus 297 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~--~~~~-~k~Vi~ 343 (344)
T cd08284 297 LFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFD--KRKV-LKVVLD 343 (344)
T ss_pred hHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHh--cCCc-eEEEec
Confidence 67888899999998863 678899999999999988 7777 999985
No 92
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=1.1e-38 Score=283.03 Aligned_cols=302 Identities=20% Similarity=0.222 Sum_probs=247.5
Q ss_pred cceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEc--CCCCCCCCCCEEEecCC
Q psy2960 86 RVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVG--SDVSSLAVGDHVIPDTQ 163 (405)
Q Consensus 86 ~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG--~~v~~~~~GdrV~~~~~ 163 (405)
+.+++++.++|+|+++|||+|+.|.+++|.-.. +....+ ....|+-+|-...|-++... ++..+|++||.|.++
T Consensus 25 d~F~lee~~vp~p~~GqvLl~~~ylS~DPymRg-rm~d~~-SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~-- 100 (340)
T COG2130 25 DDFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRG-RMSDAP-SYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV-- 100 (340)
T ss_pred CCceeEeccCCCCCcCceEEEEEEeccCHHHee-cccCCc-ccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec--
Confidence 459999999999999999999999999993322 222222 12457778877766444433 567789999999988
Q ss_pred CCCcccceEeecccceEEcCCCCCh--hhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcE
Q psy2960 164 HLGTWRNYGKFNHDVLMKVPKDIAL--TEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKT 241 (405)
Q Consensus 164 ~~G~~a~~~~v~~~~~~~iP~~~s~--~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v 241 (405)
.+|+||..++.+.+.++++..-+ .....+..+..|||.+|.+.++.++|++|+|.+|+|+||..+.||||..||+|
T Consensus 101 --~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rV 178 (340)
T COG2130 101 --SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRV 178 (340)
T ss_pred --ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeE
Confidence 48999999999999999865322 23355777899999999999999999999999999999999999999999999
Q ss_pred EEEecCCcchHHHHHHHHH-cCCcEEeChh--hHHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEEeccCC
Q psy2960 242 INIVRNRDDIDKLKSYLKS-LGADYVFTEE--ELRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSR 317 (405)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~-lg~~~v~~~~--d~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~~~~ 317 (405)
+.+++++|+ .+++.+ +|.|.++|++ |+.+ +.+.+ +.|+|+.||++|++.+.+.+..|+..+|++.||..+.
T Consensus 179 VGiaGg~eK----~~~l~~~lGfD~~idyk~~d~~~~L~~a~-P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~ 253 (340)
T COG2130 179 VGIAGGAEK----CDFLTEELGFDAGIDYKAEDFAQALKEAC-PKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQ 253 (340)
T ss_pred EEecCCHHH----HHHHHHhcCCceeeecCcccHHHHHHHHC-CCCeEEEEEcCCchHHHHHHHhhccccceeeeeehhh
Confidence 999988766 566666 9999999986 4666 77776 5899999999999999999999999999999997654
Q ss_pred CCcc-c-----CcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHHhhh
Q psy2960 318 EPVQ-I-----PTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSI 391 (405)
Q Consensus 318 ~~~~-~-----~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~ 391 (405)
.+.+ . ....++.+.+++.|+....... ....+.++++.+|+++|+|+...+.+-.|+++++||..|.
T Consensus 254 YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~-----~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl-- 326 (340)
T COG2130 254 YNAPELPPGPRRLPLLMAKRLRVQGFIVASDYD-----QRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLL-- 326 (340)
T ss_pred cCCCCCCCCcchhhHHHhhhheeEEEEechhhh-----hhhHHHHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHh--
Confidence 4322 1 1234567899999998843322 2335788999999999999988877778999999999999
Q ss_pred cCCCCceEEEEecC
Q psy2960 392 QGKSGVKYYIDFRQ 405 (405)
Q Consensus 392 ~~~~~gKvvl~~~~ 405 (405)
+|+..||+|+++.+
T Consensus 327 ~G~N~GK~vvKv~~ 340 (340)
T COG2130 327 SGKNFGKLVVKVAD 340 (340)
T ss_pred cCCccceEEEEecC
Confidence 99999999999853
No 93
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=6.8e-39 Score=308.90 Aligned_cols=323 Identities=23% Similarity=0.302 Sum_probs=248.8
Q ss_pred eeEEEEccCCCCccceEeeeecCCCC-CCCeEEEEEEEeecChhhhhhhcccCC--------------CCCCCCCCCccc
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSV-QKHEVVVKMLVAPVNPADINTIQGVYP--------------IKPTLPAVPGFE 137 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~-~~~eVlVkv~a~gi~~~D~~~~~g~~~--------------~~~~~p~~lG~E 137 (405)
||+++++++|++.+.+++++.+.|+| +++||+|||.++++|++|++...|... ....+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 78999999888655688899999999 499999999999999999999887421 023568899999
Q ss_pred eEEEEEEEcCCCCCCCCCCEEEecCC--CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCC--
Q psy2960 138 GVGEVVEVGSDVSSLAVGDHVIPDTQ--HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSP-- 213 (405)
Q Consensus 138 ~~G~V~~vG~~v~~~~~GdrV~~~~~--~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~-- 213 (405)
++|+|+++|++++++++||||++... ..|+|++|+.++.+.++++|+++++++++.+++.+.|||+++.+.+.+.+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~ 160 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKN 160 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCcc
Confidence 99999999999999999999998742 35999999999999999999999999999999999999999988777754
Q ss_pred --CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECC
Q psy2960 214 --GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCV 291 (405)
Q Consensus 214 --g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~ 291 (405)
|++|+|+|++|++|++++++|+++|+++++++++ + +.+.++++|.+++++..+.......+.+.++|++|||+
T Consensus 161 ~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~----~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~vi~~~ 235 (350)
T cd08248 161 AAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-D----AIPLVKSLGADDVIDYNNEDFEEELTERGKFDVILDTV 235 (350)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-c----hHHHHHHhCCceEEECCChhHHHHHHhcCCCCEEEECC
Confidence 9999999999999999999999999999888743 2 35677889998888765421122223356899999999
Q ss_pred CchhHHHHHHhcccCCEEEEEeccCCCCcc-cCc-ccccccCeEEEEEecchhhhhhc----cHHHHHHHHHHHHHHHHc
Q psy2960 292 GGNSATNLLRTLVSKGVMVTYGGMSREPVQ-IPT-SAFIFKDITLRGHWMTRWQKENK----ESAERKSMMNELTEMMRT 365 (405)
Q Consensus 292 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~-~~~~~k~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 365 (405)
|+.....++++++++|+++.+|........ ... ...+...+++............. ......+.+.++++++++
T Consensus 236 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (350)
T cd08248 236 GGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVED 315 (350)
T ss_pred ChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhC
Confidence 998778889999999999999854221110 000 00000111111000000000000 001124568889999999
Q ss_pred CcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 366 GKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 366 g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
|.+.+.+++.|+++++.+||+.+. +++..+|++++
T Consensus 316 g~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~vv~~ 350 (350)
T cd08248 316 GKIKPVIDKVFPFEEVPEAYEKVE--SGHARGKTVIK 350 (350)
T ss_pred CCEecccceeecHHHHHHHHHHHh--cCCCceEEEeC
Confidence 999887889999999999999998 77778899874
No 94
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=6.1e-38 Score=301.49 Aligned_cols=308 Identities=22% Similarity=0.261 Sum_probs=251.6
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
|||+++++++. +.+++.|.|+++++||+||+.++++|+.|+..+.|.++ ...|.++|+|++|+|+.+|++++.|
T Consensus 1 ~~a~~~~~~~~----l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~--~~~~~~~g~~~~G~V~~~g~~v~~~ 74 (343)
T cd08236 1 MKALVLTGPGD----LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA--YHPPLVLGHEFSGTVEEVGSGVDDL 74 (343)
T ss_pred CeeEEEecCCc----eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC--CCCCcccCcceEEEEEEECCCCCcC
Confidence 78999998764 88899999999999999999999999999998888653 2457899999999999999999999
Q ss_pred CCCCEEEecCC--------------------------CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHH
Q psy2960 153 AVGDHVIPDTQ--------------------------HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLK 206 (405)
Q Consensus 153 ~~GdrV~~~~~--------------------------~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~ 206 (405)
++||+|++++. ..|+|++|+.++.+.++++|+++++++++++ ..++|||+++.
T Consensus 75 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~ 153 (343)
T cd08236 75 AVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR 153 (343)
T ss_pred CCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH
Confidence 99999998621 3589999999999999999999999999888 57899999996
Q ss_pred hhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHHcCCcEEeChhhH-HH-HhhhcCCCC
Q psy2960 207 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEEEL-RN-ISRDASIPK 283 (405)
Q Consensus 207 ~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~-~~-i~~~t~g~g 283 (405)
...+++|++|||+|+ |.+|++++|+|+.+|++ +++++++++ +.+.++++|++.++++++. .. +.+.+++.+
T Consensus 154 -~~~~~~~~~vlI~g~-g~~g~~~~~lA~~~G~~~v~~~~~~~~----~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 227 (343)
T cd08236 154 -LAGITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDE----KLAVARELGADDTINPKEEDVEKVRELTEGRG 227 (343)
T ss_pred -hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHH----HHHHHHHcCCCEEecCccccHHHHHHHhCCCC
Confidence 688999999999975 99999999999999998 777765532 3566778999999876532 33 777777788
Q ss_pred CcEEEECCCch-hHHHHHHhcccCCEEEEEeccCCCC--cccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHH
Q psy2960 284 PKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREP--VQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELT 360 (405)
Q Consensus 284 ~Dvvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 360 (405)
+|++|||+|+. ....++++|+++|+++.+|...... ...+...++.+++++.+++...... ...+.++++.
T Consensus 228 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 301 (343)
T cd08236 228 ADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAP------FPGDEWRTAL 301 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccc------cchhhHHHHH
Confidence 99999999864 5567899999999999998543221 1112233457889999887643211 1244577888
Q ss_pred HHHHcCccc--CCcceeeehhhHHHHHHHHhhhc-CCCCceEEE
Q psy2960 361 EMMRTGKLA--APAHKFVTLKNFQEALMNTMSIQ-GKSGVKYYI 401 (405)
Q Consensus 361 ~~~~~g~l~--~~~~~~~~~~~~~~A~~~~~~~~-~~~~gKvvl 401 (405)
+++++|.+. +.+..++++++++++++.+. + ....+|+|+
T Consensus 302 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~k~v~ 343 (343)
T cd08236 302 DLLASGKIKVEPLITHRLPLEDGPAAFERLA--DREEFSGKVLL 343 (343)
T ss_pred HHHHcCCCChHHheeeeecHHHHHHHHHHHH--cCCCCeeEEeC
Confidence 999999986 44668899999999999999 6 677889875
No 95
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=9.5e-38 Score=299.95 Aligned_cols=307 Identities=20% Similarity=0.268 Sum_probs=244.0
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhccc-CC-CCCCCCCCCccceEEEEEEEcCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGV-YP-IKPTLPAVPGFEGVGEVVEVGSDVS 150 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~-~~~~~p~~lG~E~~G~V~~vG~~v~ 150 (405)
||++++.++++. +++.+.|.|.|+++||+||+.++++|++|++++.+. +. ....+|.++|||++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~ 77 (341)
T PRK05396 1 MKALVKLKAEPG---LWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVT 77 (341)
T ss_pred CceEEEecCCCc---eEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCC
Confidence 689999887754 899999999999999999999999999999977653 11 1224678999999999999999999
Q ss_pred CCCCCCEEEecCC--------------------------CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHH
Q psy2960 151 SLAVGDHVIPDTQ--------------------------HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRM 204 (405)
Q Consensus 151 ~~~~GdrV~~~~~--------------------------~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~a 204 (405)
++++||+|++.+. .+|+|++|+.++.+.++++|+++++++++.+ ..+.+++++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~ 156 (341)
T PRK05396 78 GFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHT 156 (341)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHH
Confidence 9999999997521 3589999999999999999999999988855 466666666
Q ss_pred HHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcC
Q psy2960 205 LKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDAS 280 (405)
Q Consensus 205 l~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~ 280 (405)
+.. ...+|++|+|+|+ |++|++++|+|+++|++ ++++.++ +++.+.++++|+++++++++ +.+ +.+.+.
T Consensus 157 ~~~--~~~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~~~----~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 229 (341)
T PRK05396 157 ALS--FDLVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITDVN----EYRLELARKMGATRAVNVAKEDLRDVMAELGM 229 (341)
T ss_pred HHc--CCCCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC----HHHHHHHHHhCCcEEecCccccHHHHHHHhcC
Confidence 543 3468999999875 99999999999999995 5555322 34567888999999997653 555 777887
Q ss_pred CCCCcEEEECCCch-hHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHH
Q psy2960 281 IPKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNEL 359 (405)
Q Consensus 281 g~g~Dvvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 359 (405)
+.++|+||||.|+. ....++++++++|+++.+|.... ...++...+..+++++.++..... .+.+..+
T Consensus 230 ~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~~~~----------~~~~~~~ 298 (341)
T PRK05396 230 TEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPG-DMAIDWNKVIFKGLTIKGIYGREM----------FETWYKM 298 (341)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC-CCcccHHHHhhcceEEEEEEccCc----------cchHHHH
Confidence 88999999999865 45678999999999999985432 223334556678888887653211 2335567
Q ss_pred HHHHHcC-cccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEec
Q psy2960 360 TEMMRTG-KLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 404 (405)
Q Consensus 360 ~~~~~~g-~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~~ 404 (405)
+++++++ ++.+.+.++|+++++++||+.+. +++ .||+|++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~--~~~-~gk~vv~~~ 341 (341)
T PRK05396 299 SALLQSGLDLSPIITHRFPIDDFQKGFEAMR--SGQ-SGKVILDWD 341 (341)
T ss_pred HHHHHcCCChhHheEEEEeHHHHHHHHHHHh--cCC-CceEEEecC
Confidence 7888888 45555778999999999999998 766 799999875
No 96
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=1.9e-37 Score=294.76 Aligned_cols=322 Identities=21% Similarity=0.329 Sum_probs=267.1
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++.+..++.+ ..+.+.+.+.|.+++++++|+|.++++|++|++...+.++....+|.++|||++|+|+.+|+++.++
T Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~ 79 (325)
T TIGR02824 1 MKAIEITEPGGP-EVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRW 79 (325)
T ss_pred CceEEEccCCCc-ccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCC
Confidence 678888876654 4477777777778999999999999999999998887665434567899999999999999999999
Q ss_pred CCCCEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHH
Q psy2960 153 AVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQ 232 (405)
Q Consensus 153 ~~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiq 232 (405)
++||+|+++. .+|++++|+.++...++++|+++++.++++++.++.|+|+++...+.+++|++|+|+|++|++|+++++
T Consensus 80 ~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~ 158 (325)
T TIGR02824 80 KVGDRVCALV-AGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQ 158 (325)
T ss_pred CCCCEEEEcc-CCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHH
Confidence 9999999973 348999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred HHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChh--hHHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEE
Q psy2960 233 IARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVM 309 (405)
Q Consensus 233 la~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~--d~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~ 309 (405)
+|+.+|+++++++++.+ +.+.++++|.+.+++.. ++.. +.+.+.+.++|+++||+|+.....++++++++|++
T Consensus 159 ~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~ 234 (325)
T TIGR02824 159 LAKAFGARVFTTAGSDE----KCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRI 234 (325)
T ss_pred HHHHcCCEEEEEeCCHH----HHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhccCcEE
Confidence 99999999998876543 35667788988887654 3444 66677677899999999988777889999999999
Q ss_pred EEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHHh
Q psy2960 310 VTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTM 389 (405)
Q Consensus 310 v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~ 389 (405)
+.+|........++...++.+++++.++........ ..+......+.+++++++++.+++.+++.|++++++++|+.+.
T Consensus 235 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 313 (325)
T TIGR02824 235 VQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVA-EKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALME 313 (325)
T ss_pred EEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchh-hhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHHHHH
Confidence 999864322224444455579999999886542111 1123445677888899999999877888999999999999998
Q ss_pred hhcCCCCceEEEEe
Q psy2960 390 SIQGKSGVKYYIDF 403 (405)
Q Consensus 390 ~~~~~~~gKvvl~~ 403 (405)
++...+|+++++
T Consensus 314 --~~~~~~~~v~~~ 325 (325)
T TIGR02824 314 --SGDHIGKIVLTV 325 (325)
T ss_pred --hCCCcceEEEeC
Confidence 778899999864
No 97
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.8e-37 Score=295.36 Aligned_cols=321 Identities=27% Similarity=0.398 Sum_probs=268.7
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++...+.+ ..+.+.+.+.|.+.+++++|+|.++++|+.|+....|.++....+|.++|||++|+|+.+|++++++
T Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (328)
T cd08268 1 MRAVRFHQFGGP-EVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGF 79 (328)
T ss_pred CeEEEEeccCCc-ceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcC
Confidence 688888876654 4477888888889999999999999999999998887665444568899999999999999999999
Q ss_pred CCCCEEEecCC----CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHH
Q psy2960 153 AVGDHVIPDTQ----HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQ 228 (405)
Q Consensus 153 ~~GdrV~~~~~----~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~ 228 (405)
++||+|++++. ..|++++|+.++.+.++++|+++++++++.+++++.++|+++...+.+.++++|+|+|++|++|+
T Consensus 80 ~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~ 159 (328)
T cd08268 80 AVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGL 159 (328)
T ss_pred CCCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHH
Confidence 99999998742 34899999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCCCCcEEEECCCchhHHHHHHhccc
Q psy2960 229 NVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVS 305 (405)
Q Consensus 229 ~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~ 305 (405)
+++++++..|++++.++++.+ +.+.++++|.+.+++.+. +.. +.+.+.+.++|++++|+|+.....+++++++
T Consensus 160 ~~~~~~~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~ 235 (328)
T cd08268 160 AAIQIANAAGATVIATTRTSE----KRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAP 235 (328)
T ss_pred HHHHHHHHcCCEEEEEcCCHH----HHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHHHhhcc
Confidence 999999999999999876543 356667789888887543 444 6667767789999999999887888999999
Q ss_pred CCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHH
Q psy2960 306 KGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEAL 385 (405)
Q Consensus 306 ~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~ 385 (405)
+|+++.+|........++....+.+++++.++.+..+. . .+......++.+.+++.++.+.+.++..|+++++.+++
T Consensus 236 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (328)
T cd08268 236 GGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEIT-L--DPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAH 312 (328)
T ss_pred CCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEeccccc-C--CHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHHHHHH
Confidence 99999998544322333333346789999988765433 1 23556677888888899999988778899999999999
Q ss_pred HHHhhhcCCCCceEEEEe
Q psy2960 386 MNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 386 ~~~~~~~~~~~gKvvl~~ 403 (405)
+.+. .++..+|+|++.
T Consensus 313 ~~~~--~~~~~~~vv~~~ 328 (328)
T cd08268 313 RYLE--SGQQIGKIVVTP 328 (328)
T ss_pred HHHH--cCCCCceEEEeC
Confidence 9998 788889999863
No 98
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=1.1e-37 Score=303.26 Aligned_cols=303 Identities=21% Similarity=0.241 Sum_probs=244.4
Q ss_pred eeEEEEccCCCCccceEeeeecCCCC-CCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSV-QKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSS 151 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~-~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~ 151 (405)
||++++.+++. +++++.|+|++ +++||+|||.+++||++|++.+.|.++. .+|.++|||++|+|+++|+++..
T Consensus 1 m~~~~~~~~~~----~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~~--~~p~~~g~e~~G~V~~vG~~v~~ 74 (375)
T cd08282 1 MKAVVYGGPGN----VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGA--EPGLVLGHEAMGEVEEVGSAVES 74 (375)
T ss_pred CceEEEecCCc----eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCC--CCCceeccccEEEEEEeCCCCCc
Confidence 68899987754 88999999996 8999999999999999999999987663 46899999999999999999999
Q ss_pred CCCCCEEEecCC------------------------------------CCCcccceEeeccc--ceEEcCCCCChh---h
Q psy2960 152 LAVGDHVIPDTQ------------------------------------HLGTWRNYGKFNHD--VLMKVPKDIALT---E 190 (405)
Q Consensus 152 ~~~GdrV~~~~~------------------------------------~~G~~a~~~~v~~~--~~~~iP~~~s~~---~ 190 (405)
+++||+|++.+. ..|+|++|+.++.. .++++|++++++ +
T Consensus 75 ~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~ 154 (375)
T cd08282 75 LKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDD 154 (375)
T ss_pred CCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhh
Confidence 999999986210 13889999999976 899999999999 5
Q ss_pred hccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHHcCCcEEeCh
Q psy2960 191 ISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTE 269 (405)
Q Consensus 191 Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~-~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~ 269 (405)
++.++.++.|||+++ ..+++++|++|+|.|+ |++|++++|+|+++|+ +++++.++ +.+.+.++++|++ .+++
T Consensus 155 ~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~~~----~~~~~~~~~~g~~-~v~~ 227 (375)
T cd08282 155 YLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVDHV----PERLDLAESIGAI-PIDF 227 (375)
T ss_pred eeeecchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC----HHHHHHHHHcCCe-Eecc
Confidence 788888999999999 6689999999999876 9999999999999998 56664322 4557888899984 4555
Q ss_pred h--hHHH-HhhhcCCCCCcEEEECCCchh------------HHHHHHhcccCCEEEEEeccCCCC------------ccc
Q psy2960 270 E--ELRN-ISRDASIPKPKLALNCVGGNS------------ATNLLRTLVSKGVMVTYGGMSREP------------VQI 322 (405)
Q Consensus 270 ~--d~~~-i~~~t~g~g~Dvvld~~g~~~------------~~~~~~~l~~~G~~v~~g~~~~~~------------~~~ 322 (405)
+ ++.. +.+.++ +++|+++||+|++. +..++++++++|+++.+|...... ..+
T Consensus 228 ~~~~~~~~i~~~~~-~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~ 306 (375)
T cd08282 228 SDGDPVEQILGLEP-GGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSF 306 (375)
T ss_pred CcccHHHHHHHhhC-CCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccc
Confidence 4 3444 777776 68999999999864 567899999999999887532111 122
Q ss_pred CcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCC--cceeeehhhHHHHHHHHhhhcCCCCceEE
Q psy2960 323 PTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYY 400 (405)
Q Consensus 323 ~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~~~~~~~A~~~~~~~~~~~~gKvv 400 (405)
+...++.++.++.+.... ..+.+..++++++++++++. ++++|+++++++||+.+. +++ .+|+|
T Consensus 307 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~--~~~-~~kvv 372 (375)
T cd08282 307 DFGLLWAKGLSFGTGQAP-----------VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFD--KRL-ETKVV 372 (375)
T ss_pred cHHHHHhcCcEEEEecCC-----------chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHh--cCC-ceEEE
Confidence 333445566666554321 13457788899999999873 789999999999999998 777 99999
Q ss_pred EEe
Q psy2960 401 IDF 403 (405)
Q Consensus 401 l~~ 403 (405)
+++
T Consensus 373 v~~ 375 (375)
T cd08282 373 IKP 375 (375)
T ss_pred eCC
Confidence 863
No 99
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.7e-37 Score=296.69 Aligned_cols=313 Identities=26% Similarity=0.352 Sum_probs=253.8
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
.|+|.+...+.+ ..+++.+.+.|.|.++||+|++.++++|++|+....|.++....+|.++|||++|+|+.+|++++.|
T Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 79 (331)
T cd08273 1 NREVVVTRRGGP-EVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGF 79 (331)
T ss_pred CeeEEEccCCCc-ccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccC
Confidence 378899988876 4588999999999999999999999999999999988765433568899999999999999999999
Q ss_pred CCCCEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHH
Q psy2960 153 AVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQ 232 (405)
Q Consensus 153 ~~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiq 232 (405)
++||+|+++. ..|+|++|+.++.+.++++|+++++++++.+++++.|||+++...+++++|++|+|+|++|++|+++++
T Consensus 80 ~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~ 158 (331)
T cd08273 80 EVGDRVAALT-RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLE 158 (331)
T ss_pred CCCCEEEEeC-CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHH
Confidence 9999999983 248999999999999999999999999999999999999999887899999999999999999999999
Q ss_pred HHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChh--hHHHHhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEE
Q psy2960 233 IARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRNISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMV 310 (405)
Q Consensus 233 la~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~--d~~~i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v 310 (405)
+|+.+|++++.+++ + .+.+.++++|++.+ +.+ ++... +. .++++|+++||+|+.....++++++++|+++
T Consensus 159 ~a~~~g~~v~~~~~-~----~~~~~~~~~g~~~~-~~~~~~~~~~-~~-~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v 230 (331)
T cd08273 159 LALLAGAEVYGTAS-E----RNHAALRELGATPI-DYRTKDWLPA-ML-TPGGVDVVFDGVGGESYEESYAALAPGGTLV 230 (331)
T ss_pred HHHHcCCEEEEEeC-H----HHHHHHHHcCCeEE-cCCCcchhhh-hc-cCCCceEEEECCchHHHHHHHHHhcCCCEEE
Confidence 99999999988874 2 34677788997644 332 22112 22 2358999999999988888899999999999
Q ss_pred EEeccCCCCc-ccCc--------------ccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCccee
Q psy2960 311 TYGGMSREPV-QIPT--------------SAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKF 375 (405)
Q Consensus 311 ~~g~~~~~~~-~~~~--------------~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~ 375 (405)
.+|.....+. .... .....+++++.+.+. ... ..|....+.++.+++++++|.+++.+.++
T Consensus 231 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~p~~~~~~~~~~~~~~~~~~l~~~~~~~ 306 (331)
T cd08273 231 CYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWR--DRA--EDPKLFRQDLTELLDLLAKGKIRPKIAKR 306 (331)
T ss_pred EEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeech--hcc--cCHHHHHHHHHHHHHHHHCCCccCCcceE
Confidence 9996543221 1110 111223444444332 211 12345567889999999999999888889
Q ss_pred eehhhHHHHHHHHhhhcCCCCceEEE
Q psy2960 376 VTLKNFQEALMNTMSIQGKSGVKYYI 401 (405)
Q Consensus 376 ~~~~~~~~A~~~~~~~~~~~~gKvvl 401 (405)
|+++++++||+.+. +++..||+|+
T Consensus 307 ~~~~~~~~a~~~~~--~~~~~gkvv~ 330 (331)
T cd08273 307 LPLSEVAEAHRLLE--SGKVVGKIVL 330 (331)
T ss_pred EcHHHHHHHHHHHH--cCCCcceEEe
Confidence 99999999999998 7888999986
No 100
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.9e-37 Score=298.30 Aligned_cols=305 Identities=21% Similarity=0.270 Sum_probs=246.4
Q ss_pred eeEEEEccCCCCccceEeeeecCCCC-CCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSV-QKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSS 151 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~-~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~ 151 (405)
||++++++++. +.+.+.|.|.| +++||+||+.++++|++|++...|.++. ..|.++|||++|+|+++|++++.
T Consensus 1 m~~~~~~~~~~----~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~ 74 (345)
T cd08287 1 MRATVIHGPGD----IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT--RAPAPIGHEFVGVVEEVGSEVTS 74 (345)
T ss_pred CceeEEecCCc----eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC--CCCcccccceEEEEEEeCCCCCc
Confidence 78999988765 88999999986 9999999999999999999998887653 45789999999999999999999
Q ss_pred CCCCCEEEe-cCC-------------------------CCCcccceEeeccc--ceEEcCCCCChhhhc-----cCCCcH
Q psy2960 152 LAVGDHVIP-DTQ-------------------------HLGTWRNYGKFNHD--VLMKVPKDIALTEIS-----GITSNP 198 (405)
Q Consensus 152 ~~~GdrV~~-~~~-------------------------~~G~~a~~~~v~~~--~~~~iP~~~s~~~Aa-----~~~~~~ 198 (405)
+++||+|++ ... .+|+|++|+.++.. .++++|++++++.+. ++...+
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~ 154 (345)
T cd08287 75 VKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVM 154 (345)
T ss_pred cCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHH
Confidence 999999987 211 13899999999975 999999999983221 222578
Q ss_pred HHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-H
Q psy2960 199 CTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-I 275 (405)
Q Consensus 199 ~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i 275 (405)
.|||+++. .+++++|++|+|.| +|++|++++|+|+++|+++++++++. +.+.+.++++|++.++++++ +.+ +
T Consensus 155 ~~a~~~~~-~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~---~~~~~~~~~~ga~~v~~~~~~~~~~~i 229 (345)
T cd08287 155 GTGHHAAV-SAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRH---EDRQALAREFGATDIVAERGEEAVARV 229 (345)
T ss_pred HHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCC---HHHHHHHHHcCCceEecCCcccHHHHH
Confidence 89999985 57999999999977 59999999999999999866665443 34578888999999998753 445 7
Q ss_pred hhhcCCCCCcEEEECCCch-hHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHH
Q psy2960 276 SRDASIPKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKS 354 (405)
Q Consensus 276 ~~~t~g~g~Dvvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~ 354 (405)
.+.+++.++|+++||+|+. ....++++++++|+++.+|.... ...++....+.+++++.+... ...+
T Consensus 230 ~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 297 (345)
T cd08287 230 RELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG-GVELDVRELFFRNVGLAGGPA-----------PVRR 297 (345)
T ss_pred HHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC-CCccCHHHHHhcceEEEEecC-----------CcHH
Confidence 7778788999999999864 55678999999999999885442 334444355678999987432 1245
Q ss_pred HHHHHHHHHHcCcccCC--cceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 355 MMNELTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 355 ~~~~~~~~~~~g~l~~~--~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
.++++++++.+|.+++. +++.|+++++++||+.+. .+.. .|++|+.
T Consensus 298 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~--~~~~-~k~~~~~ 345 (345)
T cd08287 298 YLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMD--ERRA-IKVLLRP 345 (345)
T ss_pred HHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHh--CCCc-eEEEeCC
Confidence 68889999999999863 578899999999999988 6554 4999863
No 101
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1.1e-37 Score=296.79 Aligned_cols=289 Identities=21% Similarity=0.279 Sum_probs=236.2
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++.+++. +++++.|.|+++++||+|||.++++|++|++...|.++ +|.++|||++|+|+++|++ +
T Consensus 1 ~~a~~~~~~~~----~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~----~~~~~G~e~~G~Vv~~G~~---~ 69 (319)
T cd08242 1 MKALVLDGGLD----LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP----FPGVPGHEFVGIVEEGPEA---E 69 (319)
T ss_pred CeeEEEeCCCc----EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC----CCCccCceEEEEEEEeCCC---C
Confidence 68999988653 89999999999999999999999999999999988754 4789999999999999998 6
Q ss_pred CCCCEEEecC---------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHH
Q psy2960 153 AVGDHVIPDT---------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRML 205 (405)
Q Consensus 153 ~~GdrV~~~~---------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al 205 (405)
++||||...+ ...|+|++|+.++.+.++++|+++++++++.+ ....++|.++
T Consensus 70 ~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~ 148 (319)
T cd08242 70 LVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEIL 148 (319)
T ss_pred CCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHHH
Confidence 7999997421 12589999999999999999999999998864 3455566555
Q ss_pred HhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCc
Q psy2960 206 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPK 285 (405)
Q Consensus 206 ~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~D 285 (405)
...++++|++|||+| +|++|++++|+|+.+|+++++++++. ++++.++++|++.++++++. +.+.++|
T Consensus 149 -~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~----~~~~~~~~~g~~~~~~~~~~------~~~~~~d 216 (319)
T cd08242 149 -EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHS----EKLALARRLGVETVLPDEAE------SEGGGFD 216 (319)
T ss_pred -HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCH----HHHHHHHHcCCcEEeCcccc------ccCCCCC
Confidence 568999999999997 59999999999999999988886543 45788888999988876432 3467899
Q ss_pred EEEECCCch-hHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHH
Q psy2960 286 LALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMR 364 (405)
Q Consensus 286 vvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (405)
+++||+|+. ....++++++++|+++..+... ....++...+..++.++.+.+... +++++++++
T Consensus 217 ~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~--------------~~~~~~~~~ 281 (319)
T cd08242 217 VVVEATGSPSGLELALRLVRPRGTVVLKSTYA-GPASFDLTKAVVNEITLVGSRCGP--------------FAPALRLLR 281 (319)
T ss_pred EEEECCCChHHHHHHHHHhhcCCEEEEEcccC-CCCccCHHHheecceEEEEEeccc--------------HHHHHHHHH
Confidence 999999874 5567889999999999876432 223444455667888888875432 567788999
Q ss_pred cCcc--cCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 365 TGKL--AAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 365 ~g~l--~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
+|++ .+.+++.|+++++++||+.+. ++. .+|+||++
T Consensus 282 ~~~l~~~~~~~~~~~l~~~~~a~~~~~--~~~-~~k~vi~~ 319 (319)
T cd08242 282 KGLVDVDPLITAVYPLEEALEAFERAA--EPG-ALKVLLRP 319 (319)
T ss_pred cCCCChhhceEEEEeHHHHHHHHHHHh--cCC-ceEEEeCC
Confidence 9999 455789999999999999988 555 58999864
No 102
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.9e-37 Score=291.86 Aligned_cols=318 Identities=24% Similarity=0.349 Sum_probs=259.7
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++.+++. .+.+++++.|.|++.+++|+||+.++++|++|+....|.++. ..+|.++|||++|+|+.+|++++.+
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~~~~~ 78 (325)
T cd08271 1 MKAWVLPKPGA-ALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA-WSYPHVPGVDGAGVVVAVGAKVTGW 78 (325)
T ss_pred CeeEEEccCCC-cceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCcccccceEEEEEEeCCCCCcC
Confidence 79999999884 223999999999999999999999999999999988776532 1347789999999999999999999
Q ss_pred CCCCEEEecCC--CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHH
Q psy2960 153 AVGDHVIPDTQ--HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNV 230 (405)
Q Consensus 153 ~~GdrV~~~~~--~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~a 230 (405)
++||+|++... ..|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.+.+++++|++|+|+|++|++|+++
T Consensus 79 ~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~ 158 (325)
T cd08271 79 KVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFA 158 (325)
T ss_pred CCCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHH
Confidence 99999998731 2589999999999999999999999999999999999999998888999999999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCC
Q psy2960 231 IQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKG 307 (405)
Q Consensus 231 iqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G 307 (405)
+++|+..|++++.++ ++ .+.+.++++|++.+++.++ +.. +.+.+.+.++|+++||+++......+++++++|
T Consensus 159 ~~~a~~~g~~v~~~~-~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~G 233 (325)
T cd08271 159 VQLAKRAGLRVITTC-SK----RNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNG 233 (325)
T ss_pred HHHHHHcCCEEEEEE-cH----HHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhhccCC
Confidence 999999999998876 32 2356778899998887653 444 777777788999999999988778899999999
Q ss_pred EEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhc--cHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHH
Q psy2960 308 VMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENK--ESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEAL 385 (405)
Q Consensus 308 ~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~ 385 (405)
+++.++...... ....+.+++.+....+.......+ ......+.+.+++++++++.+.+.+++.|+++++.+||
T Consensus 234 ~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~ 309 (325)
T cd08271 234 HLVCIQGRPDAS----PDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEAL 309 (325)
T ss_pred EEEEEcCCCCCc----chhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHHH
Confidence 999997543221 111223444444443322211111 11345667888999999999988778899999999999
Q ss_pred HHHhhhcCCCCceEEEEe
Q psy2960 386 MNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 386 ~~~~~~~~~~~gKvvl~~ 403 (405)
+.+. ++...+|+++++
T Consensus 310 ~~~~--~~~~~~kiv~~~ 325 (325)
T cd08271 310 RALK--DRHTRGKIVVTI 325 (325)
T ss_pred HHHH--cCCccceEEEEC
Confidence 9999 788899999874
No 103
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=3.5e-37 Score=295.06 Aligned_cols=301 Identities=22% Similarity=0.320 Sum_probs=246.0
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||++++.+++. +++.+.|.|++.++||+||+.++++|+.|+....|.++. .+|.++|+|++|+|+.+|++++++
T Consensus 1 ~~a~~~~~~~~----~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~--~~p~~~g~~~~G~v~~vG~~v~~~ 74 (334)
T cd08234 1 MKALVYEGPGE----LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA--APPLVPGHEFAGVVVAVGSKVTGF 74 (334)
T ss_pred CeeEEecCCCc----eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC--CCCcccccceEEEEEEeCCCCCCC
Confidence 78999988774 889999999999999999999999999999999887654 368899999999999999999999
Q ss_pred CCCCEEEecC--------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHH
Q psy2960 153 AVGDHVIPDT--------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLK 206 (405)
Q Consensus 153 ~~GdrV~~~~--------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~ 206 (405)
++||+|++.. ...|+|++|+.++.+.++++|+++++.+|+.+ ..+.++++++
T Consensus 75 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l- 152 (334)
T cd08234 75 KVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL- 152 (334)
T ss_pred CCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-
Confidence 9999998721 03589999999999999999999999999876 7888999998
Q ss_pred hhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHHcCCcEEeChhhHHH-HhhhcCCCCC
Q psy2960 207 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKP 284 (405)
Q Consensus 207 ~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~-i~~~t~g~g~ 284 (405)
..+++++|++|||+|+ |++|++++++|+.+|++ ++++.+++ ++.+.++++|++.++++.+... ..+.+.+.++
T Consensus 153 ~~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v 227 (334)
T cd08234 153 DLLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAEPNE----EKLELAKKLGATETVDPSREDPEAQKEDNPYGF 227 (334)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCH----HHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCC
Confidence 6689999999999975 99999999999999998 56665443 3466778899988887653222 2245556789
Q ss_pred cEEEECCCc-hhHHHHHHhcccCCEEEEEeccCC-CCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHH
Q psy2960 285 KLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSR-EPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEM 362 (405)
Q Consensus 285 Dvvld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (405)
|+++||+|. .....++++++++|+++.+|.... ....++...++.+++++.+.+.. .+.+++++++
T Consensus 228 d~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~ 295 (334)
T cd08234 228 DVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN------------PYTFPRAIAL 295 (334)
T ss_pred cEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC------------HHHHHHHHHH
Confidence 999999985 455678999999999999986443 12233333344478888876532 2347788899
Q ss_pred HHcCcccCC--cceeeehhhHHHHHHHHhhhcCCCCceEEE
Q psy2960 363 MRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYI 401 (405)
Q Consensus 363 ~~~g~l~~~--~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl 401 (405)
++++.+++. ++.+|+++++++|++.+. + ...+|+|+
T Consensus 296 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~~--~-~~~~k~vi 333 (334)
T cd08234 296 LESGKIDVKGLVSHRLPLEEVPEALEGMR--S-GGALKVVV 333 (334)
T ss_pred HHcCCCChhhhEEEEecHHHHHHHHHHHh--c-CCceEEEe
Confidence 999998753 568899999999999999 7 78899986
No 104
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=4.7e-37 Score=293.51 Aligned_cols=310 Identities=24% Similarity=0.304 Sum_probs=250.3
Q ss_pred eeEEEEccCCC---CccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCC--CCCCCCCCccceEEEEEEEcC
Q psy2960 73 ANKLVYNQHGT---PLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPI--KPTLPAVPGFEGVGEVVEVGS 147 (405)
Q Consensus 73 ~~a~~~~~~g~---~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~~lG~E~~G~V~~vG~ 147 (405)
.|+|.+++.++ +.+.+++++.|.|++.++||+||+.++|+|+.|.....+.... +...+.++|+|++|+|+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence 46777776542 2366999999999999999999999999999887655543211 112356899999999999996
Q ss_pred CCCCCCCCCEEEecCCCCCcccceEeecc-cceEEcCCCCC--hhhhcc-CCCcHHHHHHHHHhhcCCCCCCEEEEeCCC
Q psy2960 148 DVSSLAVGDHVIPDTQHLGTWRNYGKFNH-DVLMKVPKDIA--LTEISG-ITSNPCTAYRMLKDYNSLSPGDVVIQNGAN 223 (405)
Q Consensus 148 ~v~~~~~GdrV~~~~~~~G~~a~~~~v~~-~~~~~iP~~~s--~~~Aa~-~~~~~~ta~~al~~~~~~~~g~~VLI~ga~ 223 (405)
+ ++++||||+++ ++|++|+.++. +.++++|++++ +.++++ +++++.|||+++...+.+.+|++|||+|++
T Consensus 82 ~--~~~~Gd~V~~~----~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~ 155 (329)
T cd05288 82 P--DFKVGDLVSGF----LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAA 155 (329)
T ss_pred C--CCCCCCEEecc----cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCc
Confidence 4 79999999987 58999999999 99999999995 555555 899999999999887889999999999999
Q ss_pred cHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHH-cCCcEEeChhh--HHH-HhhhcCCCCCcEEEECCCchhHHHH
Q psy2960 224 SACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADYVFTEEE--LRN-ISRDASIPKPKLALNCVGGNSATNL 299 (405)
Q Consensus 224 G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~-lg~~~v~~~~d--~~~-i~~~t~g~g~Dvvld~~g~~~~~~~ 299 (405)
|++|++++|+|+..|+++++++++. .+.+.+++ +|++++++.++ +.. +.+.++ +++|++|||+|+.....+
T Consensus 156 g~ig~~~~~~a~~~G~~vi~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~-~~~d~vi~~~g~~~~~~~ 230 (329)
T cd05288 156 GAVGSVVGQIAKLLGARVVGIAGSD----EKCRWLVEELGFDAAINYKTPDLAEALKEAAP-DGIDVYFDNVGGEILDAA 230 (329)
T ss_pred chHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHhhcCCceEEecCChhHHHHHHHhcc-CCceEEEEcchHHHHHHH
Confidence 9999999999999999998887554 34667777 99999987654 444 666664 689999999999888889
Q ss_pred HHhcccCCEEEEEeccCCCCcc-----cCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcce
Q psy2960 300 LRTLVSKGVMVTYGGMSREPVQ-----IPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHK 374 (405)
Q Consensus 300 ~~~l~~~G~~v~~g~~~~~~~~-----~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~ 374 (405)
+++++++|+++.+|........ ++....+.+++++.++....+. ....+.+.++.+++.+|.+++.+..
T Consensus 231 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~g~i~~~~~~ 304 (329)
T cd05288 231 LTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYA------DRFPEALAELAKWLAEGKLKYREDV 304 (329)
T ss_pred HHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhH------HHHHHHHHHHHHHHHCCCccccccc
Confidence 9999999999999865432211 2234456788999887764322 2335678889999999999987777
Q ss_pred eeehhhHHHHHHHHhhhcCCCCceEEE
Q psy2960 375 FVTLKNFQEALMNTMSIQGKSGVKYYI 401 (405)
Q Consensus 375 ~~~~~~~~~A~~~~~~~~~~~~gKvvl 401 (405)
.++++++++||+.+. +++..||+|+
T Consensus 305 ~~~l~~~~~a~~~~~--~~~~~gkvvv 329 (329)
T cd05288 305 VEGLENAPEAFLGLF--TGKNTGKLVV 329 (329)
T ss_pred cccHHHHHHHHHHHh--cCCCccceeC
Confidence 899999999999998 7888899874
No 105
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=5.9e-37 Score=288.69 Aligned_cols=297 Identities=20% Similarity=0.294 Sum_probs=247.7
Q ss_pred CCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCCCCCCEEEecC-CCCCcccceEe
Q psy2960 95 LNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSLAVGDHVIPDT-QHLGTWRNYGK 173 (405)
Q Consensus 95 ~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~~GdrV~~~~-~~~G~~a~~~~ 173 (405)
.|.+.+++++||+.++++|+.|++...|.++..+.+|.++|+|++|+|+++|++++++++||+|+++. ...|+|++|+.
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~ 81 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVT 81 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEE
Confidence 46789999999999999999999999887654446788999999999999999999999999999874 24589999999
Q ss_pred ecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHH
Q psy2960 174 FNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDK 253 (405)
Q Consensus 174 v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~ 253 (405)
++.+.++++|++++++++++++..++|||+++. .+.+++|++|+|++++|++|++++|+|+++|+++++++++. .
T Consensus 82 ~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~----~ 156 (303)
T cd08251 82 VPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSD----D 156 (303)
T ss_pred ccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCH----H
Confidence 999999999999999999999999999999985 58999999999999999999999999999999999887553 3
Q ss_pred HHHHHHHcCCcEEeChh--hHHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEEeccCCC-CcccCcccccc
Q psy2960 254 LKSYLKSLGADYVFTEE--ELRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSRE-PVQIPTSAFIF 329 (405)
Q Consensus 254 ~~~~~~~lg~~~v~~~~--d~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~ 329 (405)
+.+.++++|++.+++.. ++.. +.+.+.+.++|+++||+++.....++++++++|+++.+|..... ...+.... +.
T Consensus 157 ~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~ 235 (303)
T cd08251 157 KLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSV-LS 235 (303)
T ss_pred HHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChhH-hh
Confidence 46777889999998754 3555 77788888999999999988878889999999999999854321 11222222 34
Q ss_pred cCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEE
Q psy2960 330 KDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 401 (405)
Q Consensus 330 k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl 401 (405)
+++++....+..+.... ++...+.+.++.+++++|.+++.+++.|++++++++|+.+. +++..+|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~iv~ 303 (303)
T cd08251 236 NNQSFHSVDLRKLLLLD--PEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLS--DRENIGKVVV 303 (303)
T ss_pred cCceEEEEehHHhhhhC--HHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHH--hCCCcceEeC
Confidence 56666666554333222 24556778889999999999988889999999999999998 7888899874
No 106
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=5.6e-37 Score=299.04 Aligned_cols=294 Identities=19% Similarity=0.300 Sum_probs=236.7
Q ss_pred eEeeeecCCCCCCCeEEEEEEEeecChhhhhhhccc------CCCCCCCCCCCccceEEEEEEEcCCCCCCCCCCEEEec
Q psy2960 88 VTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGV------YPIKPTLPAVPGFEGVGEVVEVGSDVSSLAVGDHVIPD 161 (405)
Q Consensus 88 l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~------~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~~GdrV~~~ 161 (405)
+++++.|.|+++++||+||+.++|+|++|++.+.+. ++....+|.++|||++|+|+++|++++.|++||||++.
T Consensus 39 ~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 118 (384)
T cd08265 39 LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAE 118 (384)
T ss_pred EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEEC
Confidence 899999999999999999999999999999988632 12223568899999999999999999999999999862
Q ss_pred C--------------------------CCCCcccceEeecccceEEcCCCC-------ChhhhccCCCcHHHHHHHHHhh
Q psy2960 162 T--------------------------QHLGTWRNYGKFNHDVLMKVPKDI-------ALTEISGITSNPCTAYRMLKDY 208 (405)
Q Consensus 162 ~--------------------------~~~G~~a~~~~v~~~~~~~iP~~~-------s~~~Aa~~~~~~~ta~~al~~~ 208 (405)
+ ...|+|++|+.++.+.++++|+++ +++ +++++.++++||+++...
T Consensus 119 ~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~ 197 (384)
T cd08265 119 EMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIR 197 (384)
T ss_pred CCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhh
Confidence 1 125899999999999999999864 444 666777899999999665
Q ss_pred -cCCCCCCEEEEeCCCcHHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHHcCCcEEeChh-----hHHH-HhhhcC
Q psy2960 209 -NSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEE-----ELRN-ISRDAS 280 (405)
Q Consensus 209 -~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~-~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~-----d~~~-i~~~t~ 280 (405)
+++++|++|||+|+ |++|++++|+|+.+|+ +++++.+++ ++.+.++++|++++++++ ++.. +.+.+.
T Consensus 198 ~~~~~~g~~VlV~g~-g~vG~~ai~lA~~~G~~~vi~~~~~~----~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~ 272 (384)
T cd08265 198 GGGFRPGAYVVVYGA-GPIGLAAIALAKAAGASKVIAFEISE----ERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTK 272 (384)
T ss_pred cCCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCH----HHHHHHHHcCCCEEEcccccccccHHHHHHHhcC
Confidence 68999999999965 9999999999999999 466665432 357888999999999865 4555 888888
Q ss_pred CCCCcEEEECCCch--hHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHH
Q psy2960 281 IPKPKLALNCVGGN--SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNE 358 (405)
Q Consensus 281 g~g~Dvvld~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 358 (405)
++++|+|+||.|+. ....++++++++|+++.+|.... ...++...+..+..++.+.+... ....+++
T Consensus 273 g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~~~----------~~~~~~~ 341 (384)
T cd08265 273 GWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT-TVPLHLEVLQVRRAQIVGAQGHS----------GHGIFPS 341 (384)
T ss_pred CCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC-CCcccHHHHhhCceEEEEeeccC----------CcchHHH
Confidence 88999999999963 55678999999999999985432 22333344555677777765321 1235788
Q ss_pred HHHHHHcCcccCC--cceeeehhhHHHHHHHHhhhcCCCCceEEE
Q psy2960 359 LTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYI 401 (405)
Q Consensus 359 ~~~~~~~g~l~~~--~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl 401 (405)
+++++++|.+++. ++++|+++++++||+.+. + ...+|+|+
T Consensus 342 ~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~--~-~~~~kvvv 383 (384)
T cd08265 342 VIKLMASGKIDMTKIITARFPLEGIMEAIKAAS--E-RTDGKITI 383 (384)
T ss_pred HHHHHHcCCCChHHheEEEeeHHHHHHHHHHHh--c-CCCceEEe
Confidence 8999999999864 678899999999999966 5 46889886
No 107
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=6.8e-37 Score=294.25 Aligned_cols=300 Identities=23% Similarity=0.307 Sum_probs=240.7
Q ss_pred EEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcc-cCCC-CCCCCCCCccceEEEEEEEcCCCCCCC
Q psy2960 76 LVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQG-VYPI-KPTLPAVPGFEGVGEVVEVGSDVSSLA 153 (405)
Q Consensus 76 ~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g-~~~~-~~~~p~~lG~E~~G~V~~vG~~v~~~~ 153 (405)
++++++.. +.+++.|.|.+.++||+|||.++++|+.|++.+.+ ..+. ...+|.++|+|++|+|+++|+++++|+
T Consensus 2 ~~~~~~~~----~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 77 (343)
T cd05285 2 AVLHGPGD----LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLK 77 (343)
T ss_pred ceEecCCc----eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCC
Confidence 45566543 88999999999999999999999999999987642 2211 123577899999999999999999999
Q ss_pred CCCEEEecC---------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHH
Q psy2960 154 VGDHVIPDT---------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLK 206 (405)
Q Consensus 154 ~GdrV~~~~---------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~ 206 (405)
+||+|++.+ ...|+|++|+.++++.++++|+++++++|+.+ .++.+|++++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~- 155 (343)
T cd05285 78 VGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC- 155 (343)
T ss_pred CCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-
Confidence 999998621 12589999999999999999999999999887 5788999997
Q ss_pred hhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHHcCCcEEeChhh--H---HH-Hhhhc
Q psy2960 207 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEEE--L---RN-ISRDA 279 (405)
Q Consensus 207 ~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~---~~-i~~~t 279 (405)
..+.+++|++|||+|+ |++|++++|+|+.+|++ ++++++++ ++.+.++++|++++++.++ + .. +.+.+
T Consensus 156 ~~~~~~~g~~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~----~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~ 230 (343)
T cd05285 156 RRAGVRPGDTVLVFGA-GPIGLLTAAVAKAFGATKVVVTDIDP----SRLEFAKELGATHTVNVRTEDTPESAEKIAELL 230 (343)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCH----HHHHHHHHcCCcEEeccccccchhHHHHHHHHh
Confidence 6689999999999876 89999999999999998 66665443 3467778899999998653 2 44 77778
Q ss_pred CCCCCcEEEECCCch-hHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHH
Q psy2960 280 SIPKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNE 358 (405)
Q Consensus 280 ~g~g~Dvvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 358 (405)
.+.++|++|||.|+. ....++++++++|+++.+|.... ...++......+++++.++... .+.++.
T Consensus 231 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 297 (343)
T cd05285 231 GGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKP-EVTLPLSAASLREIDIRGVFRY------------ANTYPT 297 (343)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CCccCHHHHhhCCcEEEEeccC------------hHHHHH
Confidence 788899999999986 66788999999999999985332 2233334455677777776432 144677
Q ss_pred HHHHHHcCccc--CCcceeeehhhHHHHHHHHhhhcCC-CCceEEE
Q psy2960 359 LTEMMRTGKLA--APAHKFVTLKNFQEALMNTMSIQGK-SGVKYYI 401 (405)
Q Consensus 359 ~~~~~~~g~l~--~~~~~~~~~~~~~~A~~~~~~~~~~-~~gKvvl 401 (405)
++++++++.+. +.+.++|+++++.+||+.+. +++ ..+|++|
T Consensus 298 ~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~--~~~~~~~k~~~ 341 (343)
T cd05285 298 AIELLASGKVDVKPLITHRFPLEDAVEAFETAA--KGKKGVIKVVI 341 (343)
T ss_pred HHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHH--cCCCCeeEEEE
Confidence 88999999875 34678899999999999998 664 5699998
No 108
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=1.3e-36 Score=291.91 Aligned_cols=293 Identities=22% Similarity=0.317 Sum_probs=234.0
Q ss_pred eEeeeecCCCCCCCeEEEEEEEeecChhhhhhhc-ccCC-CCCCCCCCCccceEEEEEEEcCCCCCCCCCCEEEecC---
Q psy2960 88 VTVENETLNSVQKHEVVVKMLVAPVNPADINTIQ-GVYP-IKPTLPAVPGFEGVGEVVEVGSDVSSLAVGDHVIPDT--- 162 (405)
Q Consensus 88 l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~-~~~~~p~~lG~E~~G~V~~vG~~v~~~~~GdrV~~~~--- 162 (405)
+.+++.|.|+++++||+|||.++++|++|++... |.++ ....+|.++|+|++|+|+++|++|++|++||+|++.+
T Consensus 9 ~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~ 88 (339)
T cd08232 9 LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRP 88 (339)
T ss_pred eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEccCCc
Confidence 8999999999999999999999999999998763 4331 1123578999999999999999999999999998621
Q ss_pred ----------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCC
Q psy2960 163 ----------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPG 214 (405)
Q Consensus 163 ----------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g 214 (405)
...|+|++|+.++.+.++++|+++++++|+. ..+++|||+++.....+ +|
T Consensus 89 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~~ 166 (339)
T cd08232 89 CGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-AG 166 (339)
T ss_pred CCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-CC
Confidence 1258999999999999999999999999876 57888999999776666 99
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhc-CCCCCcEEEECCC
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDA-SIPKPKLALNCVG 292 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~-~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t-~g~g~Dvvld~~g 292 (405)
++|||.|+ |++|++++|+|+.+|+ +++++.+++ .+.+.++++|+++++++++.. +.+.. ...++|+++||.|
T Consensus 167 ~~VLI~g~-g~vG~~~~~lak~~G~~~v~~~~~s~----~~~~~~~~~g~~~vi~~~~~~-~~~~~~~~~~vd~vld~~g 240 (339)
T cd08232 167 KRVLVTGA-GPIGALVVAAARRAGAAEIVATDLAD----APLAVARAMGADETVNLARDP-LAAYAADKGDFDVVFEASG 240 (339)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCH----HHHHHHHHcCCCEEEcCCchh-hhhhhccCCCccEEEECCC
Confidence 99999875 8999999999999999 566665443 335677889999999875422 22222 2356999999999
Q ss_pred c-hhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCC
Q psy2960 293 G-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAP 371 (405)
Q Consensus 293 ~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ 371 (405)
+ .....++++|+++|+++.+|... .....+...++.+++++.+.... .+.++++++++++|.+++.
T Consensus 241 ~~~~~~~~~~~L~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~i~~~ 307 (339)
T cd08232 241 APAALASALRVVRPGGTVVQVGMLG-GPVPLPLNALVAKELDLRGSFRF------------DDEFAEAVRLLAAGRIDVR 307 (339)
T ss_pred CHHHHHHHHHHHhcCCEEEEEecCC-CCccCcHHHHhhcceEEEEEecC------------HHHHHHHHHHHHcCCCCch
Confidence 6 45677899999999999998543 22233333445688888776521 2346788899999998743
Q ss_pred --cceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 372 --AHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 372 --~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
+.++|+++++++|++.+. ++...||+|+++
T Consensus 308 ~~~~~~~~~~~~~~a~~~~~--~~~~~gkvvv~~ 339 (339)
T cd08232 308 PLITAVFPLEEAAEAFALAA--DRTRSVKVQLSF 339 (339)
T ss_pred hheeEEecHHHHHHHHHHHH--hCCCceeEEEeC
Confidence 578999999999999998 788899999874
No 109
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=1.9e-36 Score=293.52 Aligned_cols=307 Identities=22% Similarity=0.279 Sum_probs=239.2
Q ss_pred cceeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCC--CCCCCCCCccceEEEEEEEcCC
Q psy2960 71 YLANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPI--KPTLPAVPGFEGVGEVVEVGSD 148 (405)
Q Consensus 71 ~~~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~~lG~E~~G~V~~vG~~ 148 (405)
.+|++..+..++. +++++.|.|+++++||+|||.++++|++|++...|.... ...+|.++|||++|+|+++|++
T Consensus 16 ~~~~~~~~~~~~~----l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 91 (364)
T PLN02702 16 EENMAAWLVGVNT----LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSE 91 (364)
T ss_pred cccceEEEecCCc----eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCC
Confidence 3444444444433 888899999999999999999999999999988763211 1135789999999999999999
Q ss_pred CCCCCCCCEEEecC---------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHH
Q psy2960 149 VSSLAVGDHVIPDT---------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTA 201 (405)
Q Consensus 149 v~~~~~GdrV~~~~---------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta 201 (405)
+++|++||+|++.+ ...|+|++|+.++...++++|++++++++++. ..+.++
T Consensus 92 v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a 170 (364)
T PLN02702 92 VKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVG 170 (364)
T ss_pred CCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHH
Confidence 99999999998621 11589999999999999999999999999863 245558
Q ss_pred HHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeCh----hhHHH-Hh
Q psy2960 202 YRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTE----EELRN-IS 276 (405)
Q Consensus 202 ~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~----~d~~~-i~ 276 (405)
|+++ ...++.+|++|||+|+ |++|++++|+|+.+|+++++++++. +.+.+.++++|++.+++. .++.+ +.
T Consensus 171 ~~~~-~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 245 (364)
T PLN02702 171 VHAC-RRANIGPETNVLVMGA-GPIGLVTMLAARAFGAPRIVIVDVD---DERLSVAKQLGADEIVLVSTNIEDVESEVE 245 (364)
T ss_pred HHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC---HHHHHHHHHhCCCEEEecCcccccHHHHHH
Confidence 8887 5588999999999975 9999999999999999876666443 455778889999987653 23444 54
Q ss_pred hh--cCCCCCcEEEECCCc-hhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHH
Q psy2960 277 RD--ASIPKPKLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERK 353 (405)
Q Consensus 277 ~~--t~g~g~Dvvld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~ 353 (405)
+. +.++++|+||||+|+ ..+..++++++++|+++.+|.... ...........+++++.+++...
T Consensus 246 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~------------ 312 (364)
T PLN02702 246 EIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHN-EMTVPLTPAAAREVDVVGVFRYR------------ 312 (364)
T ss_pred HHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC-CCcccHHHHHhCccEEEEeccCh------------
Confidence 44 235689999999995 566788999999999999985432 22334445667889998876421
Q ss_pred HHHHHHHHHHHcCccc--CCcceeeeh--hhHHHHHHHHhhhcCCCCceEEEE
Q psy2960 354 SMMNELTEMMRTGKLA--APAHKFVTL--KNFQEALMNTMSIQGKSGVKYYID 402 (405)
Q Consensus 354 ~~~~~~~~~~~~g~l~--~~~~~~~~~--~~~~~A~~~~~~~~~~~~gKvvl~ 402 (405)
..++.++++++++.+. +.+.++|++ +++++||+.+. +++..+|+||.
T Consensus 313 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~--~~~~~~kvv~~ 363 (364)
T PLN02702 313 NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSA--RGGNAIKVMFN 363 (364)
T ss_pred HHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHh--cCCCceEEEEe
Confidence 2467788999999986 346678655 79999999998 77788999985
No 110
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.4e-36 Score=290.43 Aligned_cols=300 Identities=21% Similarity=0.264 Sum_probs=245.0
Q ss_pred eeEEEEccCCCCc-cceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCC
Q psy2960 73 ANKLVYNQHGTPL-RVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSS 151 (405)
Q Consensus 73 ~~a~~~~~~g~~~-~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~ 151 (405)
||++++.+++.+. +.+++.+.+.|.++++||+||+.++++|++|++...|.++. ..+|.++|||++|+|+++|+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~ 79 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP-PKLPLIPGHEIVGRVEAVGPGVTR 79 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC-CCCCccccccccEEEEEECCCCCC
Confidence 7899999888531 24788888888899999999999999999999999887654 356889999999999999999999
Q ss_pred CCCCCEEEecC---------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHH
Q psy2960 152 LAVGDHVIPDT---------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRM 204 (405)
Q Consensus 152 ~~~GdrV~~~~---------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~a 204 (405)
+++||+|.+.+ ...|+|++|+.++...++++|+++++.+++.+++++.|||++
T Consensus 80 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~ 159 (329)
T cd08298 80 FSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRA 159 (329)
T ss_pred CcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHH
Confidence 99999998621 025899999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCC
Q psy2960 205 LKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKP 284 (405)
Q Consensus 205 l~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~ 284 (405)
+ +.+++++|++|||+|+ |++|++++++|++.|+++++++++. ++.+.++++|++.+++.+.. .+.++
T Consensus 160 ~-~~~~~~~~~~vlV~g~-g~vg~~~~~la~~~g~~v~~~~~~~----~~~~~~~~~g~~~~~~~~~~-------~~~~v 226 (329)
T cd08298 160 L-KLAGLKPGQRLGLYGF-GASAHLALQIARYQGAEVFAFTRSG----EHQELARELGADWAGDSDDL-------PPEPL 226 (329)
T ss_pred H-HhhCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEcCCh----HHHHHHHHhCCcEEeccCcc-------CCCcc
Confidence 9 7799999999999975 9999999999999999999888664 34677788999888765431 24579
Q ss_pred cEEEECCCc-hhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHH
Q psy2960 285 KLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMM 363 (405)
Q Consensus 285 Dvvld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (405)
|+++++.+. .....++++++++|+++.+|........++... +.++..+.++.... .+.++++.+++
T Consensus 227 D~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~-----------~~~~~~~~~l~ 294 (329)
T cd08298 227 DAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANLT-----------RQDGEEFLKLA 294 (329)
T ss_pred cEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEEecCCC-----------HHHHHHHHHHH
Confidence 999998654 455678999999999998874221111222222 34566666654321 34577888999
Q ss_pred HcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEE
Q psy2960 364 RTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 401 (405)
Q Consensus 364 ~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl 401 (405)
+++.+++ .+++|+++++++||+.+. +++..||+|+
T Consensus 295 ~~~~l~~-~~~~~~~~~~~~a~~~~~--~~~~~~~~v~ 329 (329)
T cd08298 295 AEIPIKP-EVETYPLEEANEALQDLK--EGRIRGAAVL 329 (329)
T ss_pred HcCCCCc-eEEEEeHHHHHHHHHHHH--cCCCcceeeC
Confidence 9999887 468999999999999999 8899999874
No 111
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=1e-36 Score=288.85 Aligned_cols=294 Identities=22% Similarity=0.268 Sum_probs=239.6
Q ss_pred eEeeeecCCCCCCCeEEEEEEEeecChhhhhhh-cccCCCC-CCCCCCCccceEEEEEEEcCCCCCCCCCCEEEecCCCC
Q psy2960 88 VTVENETLNSVQKHEVVVKMLVAPVNPADINTI-QGVYPIK-PTLPAVPGFEGVGEVVEVGSDVSSLAVGDHVIPDTQHL 165 (405)
Q Consensus 88 l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~-~g~~~~~-~~~p~~lG~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~ 165 (405)
+++++.+.|++.++||+||+.++++|+.|++.. .|..+.. +..|.++|+|++|+|+.+|++++++++||+|+++. .
T Consensus 7 ~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~--~ 84 (312)
T cd08269 7 FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS--G 84 (312)
T ss_pred eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec--C
Confidence 889999999999999999999999999999987 7754321 23478999999999999999999999999999873 4
Q ss_pred CcccceEeecccceEEcCCCCChhhhccCC-CcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEE
Q psy2960 166 GTWRNYGKFNHDVLMKVPKDIALTEISGIT-SNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TIN 243 (405)
Q Consensus 166 G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~-~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~ 243 (405)
|+|++|+.++.+.++++|+++ .++ +++ .+++++++++. .+++++|++|+|+|+ |++|++++|+|+.+|++ +++
T Consensus 85 g~~~~~~~v~~~~~~~lP~~~--~~~-~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~-g~vg~~~~~la~~~g~~~v~~ 159 (312)
T cd08269 85 GAFAEYDLADADHAVPLPSLL--DGQ-AFPGEPLGCALNVFR-RGWIRAGKTVAVIGA-GFIGLLFLQLAAAAGARRVIA 159 (312)
T ss_pred CcceeeEEEchhheEECCCch--hhh-HHhhhhHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEE
Confidence 899999999999999999998 233 333 67889999987 689999999999975 89999999999999999 777
Q ss_pred EecCCcchHHHHHHHHHcCCcEEeChh--hHHH-HhhhcCCCCCcEEEECCCch-hHHHHHHhcccCCEEEEEeccCCCC
Q psy2960 244 IVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREP 319 (405)
Q Consensus 244 ~~~~~~~~~~~~~~~~~lg~~~v~~~~--d~~~-i~~~t~g~g~Dvvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~ 319 (405)
++++. ++.+.++++|++++++++ ++.+ +.+.+.+.++|+++||+|+. ....++++++++|+++.+|.....+
T Consensus 160 ~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~ 235 (312)
T cd08269 160 IDRRP----ARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGP 235 (312)
T ss_pred ECCCH----HHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCC
Confidence 76543 345677889999988753 4555 77888888999999999864 4567899999999999998654333
Q ss_pred cccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccC--CcceeeehhhHHHHHHHHhhhcCCC-C
Q psy2960 320 VQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKS-G 396 (405)
Q Consensus 320 ~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~A~~~~~~~~~~~-~ 396 (405)
..++......+++++.++..... ....+.++++++++++|.+++ .+.++|+++++++|++.+. +++. .
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~ 306 (312)
T cd08269 236 RPVPFQTWNWKGIDLINAVERDP-------RIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAAR--RRPDGF 306 (312)
T ss_pred cccCHHHHhhcCCEEEEecccCc-------cchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHH--hCCCCc
Confidence 34444455667888777653321 233567888999999999987 3568899999999999998 6655 5
Q ss_pred ceEEE
Q psy2960 397 VKYYI 401 (405)
Q Consensus 397 gKvvl 401 (405)
+|++|
T Consensus 307 ~~~~~ 311 (312)
T cd08269 307 IKGVI 311 (312)
T ss_pred eEEEe
Confidence 89886
No 112
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=8.4e-37 Score=294.66 Aligned_cols=315 Identities=23% Similarity=0.330 Sum_probs=237.2
Q ss_pred eEEEEccCCCCccceEeeeecCCCC---CCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCC
Q psy2960 74 NKLVYNQHGTPLRVVTVENETLNSV---QKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVS 150 (405)
Q Consensus 74 ~a~~~~~~g~~~~~l~~~~~~~p~~---~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~ 150 (405)
|++++.+++++ +++++.+.|.| +++||+||+.++++|++|+....+........|.++|+|++|+|+++|++++
T Consensus 2 ~~~~~~~~~~~---~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~ 78 (352)
T cd08247 2 KALTFKNNTSP---LTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVA 78 (352)
T ss_pred ceEEEecCCCc---ceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccc
Confidence 68899988877 44454454443 9999999999999999999887653221112378999999999999999999
Q ss_pred -CCCCCCEEEecCC----CCCcccceEeeccc----ceEEcCCCCChhhhccCCCcHHHHHHHHHhhc-CCCCCCEEEEe
Q psy2960 151 -SLAVGDHVIPDTQ----HLGTWRNYGKFNHD----VLMKVPKDIALTEISGITSNPCTAYRMLKDYN-SLSPGDVVIQN 220 (405)
Q Consensus 151 -~~~~GdrV~~~~~----~~G~~a~~~~v~~~----~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~-~~~~g~~VLI~ 220 (405)
.|++||+|++... ..|+|++|+.++.. .++++|+++++++++.+++++.|||+++...+ .+++|++|+|+
T Consensus 79 ~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ 158 (352)
T cd08247 79 SEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVL 158 (352)
T ss_pred cCCCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEE
Confidence 8999999998731 25899999999988 78999999999999999999999999998877 79999999999
Q ss_pred CCCcHHHHHHHHHHHHcC-C-cEEEEecCCcchHHHHHHHHHcCCcEEeChhh-----H-HHHhhh-cCCCCCcEEEECC
Q psy2960 221 GANSACGQNVIQIARHWG-L-KTINIVRNRDDIDKLKSYLKSLGADYVFTEEE-----L-RNISRD-ASIPKPKLALNCV 291 (405)
Q Consensus 221 ga~G~vG~~aiqla~~~G-~-~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d-----~-~~i~~~-t~g~g~Dvvld~~ 291 (405)
|++|++|++++|+|+.+| . .++++. +.+. .+.++++|++++++.++ + .++.+. ++++++|++|||+
T Consensus 159 ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~----~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~ 233 (352)
T cd08247 159 GGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRS----AELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCV 233 (352)
T ss_pred CCCchHHHHHHHHHHhcCCcceEEEEe-ChhH----HHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECC
Confidence 999999999999999985 4 455554 3222 34667899999987543 2 334444 4367899999999
Q ss_pred Cc-hhHHHHHHhcc---cCCEEEEEeccCCCCcc---cC------c-ccccccCeEEEEEecchhhhhhccHHHHHHHHH
Q psy2960 292 GG-NSATNLLRTLV---SKGVMVTYGGMSREPVQ---IP------T-SAFIFKDITLRGHWMTRWQKENKESAERKSMMN 357 (405)
Q Consensus 292 g~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~---~~------~-~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~ 357 (405)
|+ .....++++++ ++|+++.+++....+.. ++ . ...+.++.++..+.+.... ..+ . .+.+.
T Consensus 234 g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~--~~~~~ 308 (352)
T cd08247 234 GGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFL-LDP--N--ADWIE 308 (352)
T ss_pred CCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEE-ecC--C--HHHHH
Confidence 98 45567899999 99999987633211100 00 0 0111223322222211110 011 1 25578
Q ss_pred HHHHHHHcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 358 ELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 358 ~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
.+++++.+|.+++.++++|+++++++||+.+. +++..||+|+++
T Consensus 309 ~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~--~~~~~gkvvi~~ 352 (352)
T cd08247 309 KCAELIADGKVKPPIDSVYPFEDYKEAFERLK--SNRAKGKVVIKV 352 (352)
T ss_pred HHHHHHhCCCeEeeeccEecHHHHHHHHHHHH--cCCCCCcEEEeC
Confidence 88899999999987889999999999999999 888999999864
No 113
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=3.4e-36 Score=285.82 Aligned_cols=319 Identities=26% Similarity=0.383 Sum_probs=263.9
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCC-CCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQ-KHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSS 151 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~-~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~ 151 (405)
|+++++..++.+ ..+++.+.+ |.+. +++++|++.++++|++|++...|.+......|.++|||++|+|+.+|+++..
T Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~ 78 (323)
T cd08241 1 MKAVVCKELGGP-EDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTG 78 (323)
T ss_pred CeEEEEecCCCc-ceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCC
Confidence 688888866554 347777887 7666 4999999999999999999888866443345778999999999999999999
Q ss_pred CCCCCEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHH
Q psy2960 152 LAVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVI 231 (405)
Q Consensus 152 ~~~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~ai 231 (405)
+++||+|+++. ..|++++|+.++.+.++++|+++++.++++++..+.+||+++.....+++|++|+|+|++|++|++++
T Consensus 79 ~~~G~~V~~~~-~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~ 157 (323)
T cd08241 79 FKVGDRVVALT-GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAV 157 (323)
T ss_pred CCCCCEEEEec-CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHH
Confidence 99999999984 25899999999999999999999999999999999999999987789999999999999999999999
Q ss_pred HHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChh--hHHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCE
Q psy2960 232 QIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGV 308 (405)
Q Consensus 232 qla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~--d~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~ 308 (405)
++|+..|++++.++++. .+.+.++++|++.+++.. ++.+ +.+.+.+.++|.++||+|+.....++++++++|+
T Consensus 158 ~~a~~~g~~v~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~ 233 (323)
T cd08241 158 QLAKALGARVIAAASSE----EKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGR 233 (323)
T ss_pred HHHHHhCCEEEEEeCCH----HHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhhccCCE
Confidence 99999999999887654 346677788988888754 3445 7777777889999999999887888999999999
Q ss_pred EEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHH
Q psy2960 309 MVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNT 388 (405)
Q Consensus 309 ~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~ 388 (405)
++.+|........++....+.+++++.++.+..+.... +....+.++++.+++.++.+.+.++..|+++++.+||+.+
T Consensus 234 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (323)
T cd08241 234 LLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARRE--PELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRAL 311 (323)
T ss_pred EEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchh--HHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHHHHH
Confidence 99998533221112233345688999998765543322 2345677888999999999988788899999999999998
Q ss_pred hhhcCCCCceEEEE
Q psy2960 389 MSIQGKSGVKYYID 402 (405)
Q Consensus 389 ~~~~~~~~gKvvl~ 402 (405)
. .+...+|++++
T Consensus 312 ~--~~~~~~~vvv~ 323 (323)
T cd08241 312 A--DRKATGKVVLT 323 (323)
T ss_pred H--hCCCCCcEEeC
Confidence 8 77788999864
No 114
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=2e-36 Score=289.34 Aligned_cols=302 Identities=25% Similarity=0.328 Sum_probs=248.8
Q ss_pred eEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCCC
Q psy2960 74 NKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSLA 153 (405)
Q Consensus 74 ~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~ 153 (405)
|+++++++|.. +++.+.|.|.+.++|++|++.++++|++|++...|.++. ..+|.++|||++|+|+++|+++++++
T Consensus 1 ~~~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~~g~~~~~~~ 76 (330)
T cd08245 1 KAAVVHAAGGP---LEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG-SKYPLVPGHEIVGEVVEVGAGVEGRK 76 (330)
T ss_pred CeEEEecCCCC---ceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCC-CCCCcccCccceEEEEEECCCCcccc
Confidence 67888888653 899999999999999999999999999999999887643 35688999999999999999999999
Q ss_pred CCCEEEecC---------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHH
Q psy2960 154 VGDHVIPDT---------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLK 206 (405)
Q Consensus 154 ~GdrV~~~~---------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~ 206 (405)
+||+|+..+ ...|+|++|+.++...++++|+++++++++.+++.+.|||+++.
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~ 156 (330)
T cd08245 77 VGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALR 156 (330)
T ss_pred cCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence 999998421 13589999999999999999999999999999999999999996
Q ss_pred hhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcE
Q psy2960 207 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKL 286 (405)
Q Consensus 207 ~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dv 286 (405)
. .++++|++|||+|+ |++|++++++|+.+|+++++++++.+ +.+.++++|++.+++..+...... . ..++|+
T Consensus 157 ~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~-~-~~~~d~ 228 (330)
T cd08245 157 D-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPD----KRELARKLGADEVVDSGAELDEQA-A-AGGADV 228 (330)
T ss_pred h-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHhCCcEEeccCCcchHHh-c-cCCCCE
Confidence 6 78999999999976 78999999999999999998886643 356777889988887543222222 2 247999
Q ss_pred EEECCCc-hhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHc
Q psy2960 287 ALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRT 365 (405)
Q Consensus 287 vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (405)
++||++. .....++++++++|+++.+|.........+...++.++.++.++.... .+.++.+++++.+
T Consensus 229 vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ll~~ 297 (330)
T cd08245 229 ILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGG-----------RADLQEALDFAAE 297 (330)
T ss_pred EEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCC-----------HHHHHHHHHHHHc
Confidence 9999875 555678999999999999985433222222344666888888876542 3457778889999
Q ss_pred CcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEE
Q psy2960 366 GKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 401 (405)
Q Consensus 366 g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl 401 (405)
+.+.+ ..+.|+++++++||+.+. +++..+|+|+
T Consensus 298 ~~l~~-~~~~~~~~~~~~a~~~~~--~~~~~~~~v~ 330 (330)
T cd08245 298 GKVKP-MIETFPLDQANEAYERME--KGDVRFRFVL 330 (330)
T ss_pred CCCcc-eEEEEcHHHHHHHHHHHH--cCCCCcceeC
Confidence 99886 568899999999999999 8899999875
No 115
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.2e-35 Score=284.36 Aligned_cols=318 Identities=23% Similarity=0.329 Sum_probs=257.4
Q ss_pred eEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCCC
Q psy2960 74 NKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSLA 153 (405)
Q Consensus 74 ~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~ 153 (405)
|++.+...+.+ ..+.+.+.+.|+|.++||+||+.++++|++|++...|.++..+..|.++|||++|+|+.+|+++.+++
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 79 (337)
T cd08275 1 RAVVLTGFGGL-DKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFK 79 (337)
T ss_pred CeEEEcCCCCc-cceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCC
Confidence 45666665543 34778888888899999999999999999999998886654345678999999999999999999999
Q ss_pred CCCEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHH
Q psy2960 154 VGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQI 233 (405)
Q Consensus 154 ~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiql 233 (405)
+||+|+++. ..|+|++|+.++.+.++++|+++++++++.+++++.+||+++...+++++|++|+|+|++|++|++++++
T Consensus 80 ~G~~V~~~~-~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~ 158 (337)
T cd08275 80 VGDRVMGLT-RFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQL 158 (337)
T ss_pred CCCEEEEec-CCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHH
Confidence 999999983 3589999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChh--hHHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEE
Q psy2960 234 ARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMV 310 (405)
Q Consensus 234 a~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~--d~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v 310 (405)
|+.+ .++.++++.+ +++++.++.+|++.+++.. ++.. +++.+ +.++|+++||+|+.....++++++++|+++
T Consensus 159 a~~~--~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~v~~~~g~~~~~~~~~~l~~~g~~v 233 (337)
T cd08275 159 CKTV--PNVTVVGTAS--ASKHEALKENGVTHVIDYRTQDYVEEVKKIS-PEGVDIVLDALGGEDTRKSYDLLKPMGRLV 233 (337)
T ss_pred HHHc--cCcEEEEeCC--HHHHHHHHHcCCcEEeeCCCCcHHHHHHHHh-CCCceEEEECCcHHHHHHHHHhhccCcEEE
Confidence 9999 3333333322 3456777889998888764 3555 66666 468999999999988788899999999999
Q ss_pred EEeccCCCC---c-------------ccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcce
Q psy2960 311 TYGGMSREP---V-------------QIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHK 374 (405)
Q Consensus 311 ~~g~~~~~~---~-------------~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~ 374 (405)
.+|...... . .+.....+.+++++.++....+.... ......+.++.+++.++.+++.+++
T Consensus 234 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (337)
T cd08275 234 VYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEER---ELLTEVMDKLLKLYEEGKIKPKIDS 310 (337)
T ss_pred EEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhCh---HHHHHHHHHHHHHHHCCCCCCceee
Confidence 998543211 1 11113446788999998765332221 1224567888999999999887888
Q ss_pred eeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 375 FVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 375 ~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
.|++++++++++.+. ++...+|+++++
T Consensus 311 ~~~~~~~~~~~~~~~--~~~~~~kvv~~~ 337 (337)
T cd08275 311 VFPFEEVGEAMRRLQ--SRKNIGKVVLTP 337 (337)
T ss_pred EEcHHHHHHHHHHHH--cCCCcceEEEeC
Confidence 999999999999999 788889999874
No 116
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=6.1e-36 Score=287.40 Aligned_cols=306 Identities=23% Similarity=0.270 Sum_probs=241.5
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccC--CCCCCCCCCCccceEEEEEEEcCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVY--PIKPTLPAVPGFEGVGEVVEVGSDVS 150 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~--~~~~~~p~~lG~E~~G~V~~vG~~v~ 150 (405)
||++.++.++.. +.+.+.|.|.|+++|++|||.++++|+.|++.+.+.. .....+|.++|||++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~ 77 (341)
T cd05281 1 MKAIVKTKAGPG---AELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVT 77 (341)
T ss_pred CcceEEecCCCc---eEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCC
Confidence 789999987753 8899999999999999999999999999998765431 11124577899999999999999999
Q ss_pred CCCCCCEEEecCC--------------------------CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHH
Q psy2960 151 SLAVGDHVIPDTQ--------------------------HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRM 204 (405)
Q Consensus 151 ~~~~GdrV~~~~~--------------------------~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~a 204 (405)
.+++||+|++.+. ..|+|++|+.++.+.++++|++++++.+ +++.++.+++++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~ 156 (341)
T cd05281 78 RVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHT 156 (341)
T ss_pred CCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHH
Confidence 9999999988511 3589999999999999999999998544 666788888888
Q ss_pred HHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHHHhhhcCC
Q psy2960 205 LKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRNISRDASI 281 (405)
Q Consensus 205 l~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~-~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~i~~~t~g 281 (405)
+. ...++|++|||+|+ |++|++++|+|+.+|+ +++++.++ +++.+.++++|++++++++. +..+.+.+++
T Consensus 157 ~~--~~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 229 (341)
T cd05281 157 VL--AGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASDPN----PYRLELAKKMGADVVINPREEDVVEVKSVTDG 229 (341)
T ss_pred HH--hcCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCC----HHHHHHHHHhCcceeeCcccccHHHHHHHcCC
Confidence 75 45679999999876 9999999999999999 56666332 34567788899999887642 2246667777
Q ss_pred CCCcEEEECCCch-hHHHHHHhcccCCEEEEEeccCCCCcccCcc-cccccCeEEEEEecchhhhhhccHHHHHHHHHHH
Q psy2960 282 PKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTS-AFIFKDITLRGHWMTRWQKENKESAERKSMMNEL 359 (405)
Q Consensus 282 ~g~Dvvld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 359 (405)
+++|++|||+|+. ....++++|+++|+++.+|.... ...++.. .+..+++++.++.... ..+.+.++
T Consensus 230 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 298 (341)
T cd05281 230 TGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG-PVDIDLNNLVIFKGLTVQGITGRK----------MFETWYQV 298 (341)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC-CcccccchhhhccceEEEEEecCC----------cchhHHHH
Confidence 8999999999875 45678999999999999985433 2222222 3556778887765221 12346778
Q ss_pred HHHHHcCcccC--CcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 360 TEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 360 ~~~~~~g~l~~--~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
.+++++|.+.+ .+..+++++++++||+.+. +++ .||+|+++
T Consensus 299 ~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~--~~~-~gk~vv~~ 341 (341)
T cd05281 299 SALLKSGKVDLSPVITHKLPLEDFEEAFELMR--SGK-CGKVVLYP 341 (341)
T ss_pred HHHHHcCCCChhHheEEEecHHHHHHHHHHHh--cCC-CceEEecC
Confidence 89999999863 4667899999999999999 788 99999864
No 117
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=1.1e-35 Score=285.48 Aligned_cols=300 Identities=20% Similarity=0.246 Sum_probs=237.6
Q ss_pred ccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccC--CCCCCCCCCCccceEEEEEEEcCCCCCCCCCC
Q psy2960 79 NQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVY--PIKPTLPAVPGFEGVGEVVEVGSDVSSLAVGD 156 (405)
Q Consensus 79 ~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~--~~~~~~p~~lG~E~~G~V~~vG~~v~~~~~Gd 156 (405)
++++.+ +++++.|.|.|+++||+|||.++++|+.|+.++.+.. .....+|.++|+|++|+|+++|+++++|++||
T Consensus 5 ~~~~~~---~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 81 (340)
T TIGR00692 5 TKPGYG---AELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGD 81 (340)
T ss_pred ccCCCC---cEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCC
Confidence 355555 8899999999999999999999999999998876541 11123577899999999999999999999999
Q ss_pred EEEecC--------------------------CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcC
Q psy2960 157 HVIPDT--------------------------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNS 210 (405)
Q Consensus 157 rV~~~~--------------------------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~ 210 (405)
+|++.. ...|+|++|+.++.+.++++|+++++++| +++.++.+|++++. ..
T Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~~--~~ 158 (340)
T TIGR00692 82 YVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTVL--AG 158 (340)
T ss_pred EEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHHH--cc
Confidence 998731 13589999999999999999999998655 57788899998873 46
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHHcCCcEEeChh--hHHH-HhhhcCCCCCcE
Q psy2960 211 LSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPKPKL 286 (405)
Q Consensus 211 ~~~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~--d~~~-i~~~t~g~g~Dv 286 (405)
+++|++|+|.|+ |++|++++|+|+.+|++ ++++ ++. +++.+.++++|++.+++.+ ++.+ +.+.+++.++|+
T Consensus 159 ~~~g~~vlI~~~-g~vg~~a~~la~~~G~~~v~~~-~~~---~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~ 233 (340)
T TIGR00692 159 PISGKSVLVTGA-GPIGLMAIAVAKASGAYPVIVS-DPN---EYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDV 233 (340)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE-CCC---HHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCE
Confidence 789999999875 99999999999999998 6666 332 3456778889999888764 3555 777777889999
Q ss_pred EEECCCch-hHHHHHHhcccCCEEEEEeccCCCCcccCcc-cccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHH
Q psy2960 287 ALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTS-AFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMR 364 (405)
Q Consensus 287 vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (405)
+|||+|++ .....+++++++|+++.+|.... ...++.. .++.+++++.+++.. ...+.+.++.++++
T Consensus 234 vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~ 302 (340)
T TIGR00692 234 FLEMSGAPKALEQGLQAVTPGGRVSLLGLPPG-KVTIDFTNKVIFKGLTIYGITGR----------HMFETWYTVSRLIQ 302 (340)
T ss_pred EEECCCCHHHHHHHHHhhcCCCEEEEEccCCC-CcccchhhhhhhcceEEEEEecC----------CchhhHHHHHHHHH
Confidence 99998864 55678999999999999985422 2222222 455677777765521 11345678889999
Q ss_pred cCccc--CCcceeeehhhHHHHHHHHhhhcCCCCceEEEEe
Q psy2960 365 TGKLA--APAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 403 (405)
Q Consensus 365 ~g~l~--~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~ 403 (405)
+|.++ +.+...|++++++++|+.+. +++ .||+|+++
T Consensus 303 ~~~l~~~~~~~~~~~l~~~~~a~~~~~--~~~-~gkvvv~~ 340 (340)
T TIGR00692 303 SGKLDLDPIITHKFKFDKFEKGFELMR--SGQ-TGKVILSL 340 (340)
T ss_pred cCCCChHHheeeeeeHHHHHHHHHHHh--cCC-CceEEEeC
Confidence 99987 44678999999999999988 676 49999875
No 118
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=6.2e-36 Score=282.36 Aligned_cols=305 Identities=25% Similarity=0.350 Sum_probs=252.3
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCC--CCCCCCCCCccceEEEEEEEcCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYP--IKPTLPAVPGFEGVGEVVEVGSDVS 150 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~~lG~E~~G~V~~vG~~v~ 150 (405)
||+++++.++.. ..+.+++.+.|.++++||+||+.++++|+.|++...|... ....+|.++|||++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~ 79 (309)
T cd05289 1 MKAVRIHEYGGP-EVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVT 79 (309)
T ss_pred CceEEEcccCCc-cceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCC
Confidence 788999887764 3367788888889999999999999999999999887642 1234588999999999999999999
Q ss_pred CCCCCCEEEecC--CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHH
Q psy2960 151 SLAVGDHVIPDT--QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQ 228 (405)
Q Consensus 151 ~~~~GdrV~~~~--~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~ 228 (405)
.+++||+|+++. ...|+|++|+.++...++++|+++++.+++.+++.+.++|+++.....+.+|++|+|+|++|++|+
T Consensus 80 ~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~ 159 (309)
T cd05289 80 GFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGS 159 (309)
T ss_pred CCCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHH
Confidence 999999999883 125899999999999999999999999999999999999999988777999999999999999999
Q ss_pred HHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCCchhHHHHHHhcccCCE
Q psy2960 229 NVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVGGNSATNLLRTLVSKGV 308 (405)
Q Consensus 229 ~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~ 308 (405)
+++++|+..|+++++++++. +.+.++++|.+++++.++..... .+.+.++|+++||+|+.....++++++++|+
T Consensus 160 ~~~~~a~~~g~~v~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~ 233 (309)
T cd05289 160 FAVQLAKARGARVIATASAA-----NADFLRSLGADEVIDYTKGDFER-AAAPGGVDAVLDTVGGETLARSLALVKPGGR 233 (309)
T ss_pred HHHHHHHHcCCEEEEEecch-----hHHHHHHcCCCEEEeCCCCchhh-ccCCCCceEEEECCchHHHHHHHHHHhcCcE
Confidence 99999999999999887543 35667789988888755322111 4456789999999999988889999999999
Q ss_pred EEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHH
Q psy2960 309 MVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNT 388 (405)
Q Consensus 309 ~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~ 388 (405)
++.+|....... ..+.+++++....+.. . .+.+.++.++++++.+.+.+++.|+++++++||+.+
T Consensus 234 ~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~--------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 298 (309)
T cd05289 234 LVSIAGPPPAEQ-----AAKRRGVRAGFVFVEP--------D--GEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHERL 298 (309)
T ss_pred EEEEcCCCcchh-----hhhhccceEEEEEecc--------c--HHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHHHH
Confidence 999985432111 2344677777665421 1 456888899999999987788999999999999999
Q ss_pred hhhcCCCCceEEE
Q psy2960 389 MSIQGKSGVKYYI 401 (405)
Q Consensus 389 ~~~~~~~~gKvvl 401 (405)
. .++..+|+++
T Consensus 299 ~--~~~~~~kvv~ 309 (309)
T cd05289 299 E--SGHARGKVVL 309 (309)
T ss_pred H--hCCCCCcEeC
Confidence 8 7777888874
No 119
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=1.9e-35 Score=279.58 Aligned_cols=275 Identities=23% Similarity=0.347 Sum_probs=228.5
Q ss_pred eeEEEEccCCCCccceEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCC
Q psy2960 73 ANKLVYNQHGTPLRVVTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSL 152 (405)
Q Consensus 73 ~~a~~~~~~g~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~ 152 (405)
||+|++++.+. ..+++++.|.|++.++||+|||.++++|++|++...|.+.. ...|.++|+|++|+|+.+|++++.|
T Consensus 1 ~~~~~~~~~~~--~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~ 77 (306)
T cd08258 1 MKALVKTGPGP--GNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDP-VETPVVLGHEFSGTIVEVGPDVEGW 77 (306)
T ss_pred CeeEEEecCCC--CceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCc-CCCCeeeccceEEEEEEECCCcCcC
Confidence 67888877542 34899999999999999999999999999999998887532 2457899999999999999999999
Q ss_pred CCCCEEEecCC---------------------------CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHH
Q psy2960 153 AVGDHVIPDTQ---------------------------HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRML 205 (405)
Q Consensus 153 ~~GdrV~~~~~---------------------------~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al 205 (405)
++||+|++... ..|+|++|+.++...++++|+++++++|+ ++.++++||+++
T Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l 156 (306)
T cd08258 78 KVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAV 156 (306)
T ss_pred CCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHH
Confidence 99999998631 14899999999999999999999999887 777889999999
Q ss_pred HhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChh--hHHH-HhhhcCCC
Q psy2960 206 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIP 282 (405)
Q Consensus 206 ~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~--d~~~-i~~~t~g~ 282 (405)
...+.+++|++|||.| +|++|++++|+|+.+|++++++..+.+ +++.+.++++|++++ +++ ++.. +.+.+.++
T Consensus 157 ~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~--~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~ 232 (306)
T cd08258 157 AERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKD--EVRLDVAKELGADAV-NGGEEDLAELVNEITDGD 232 (306)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCC--HHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCCC
Confidence 8888999999999977 599999999999999999877743322 345677888999888 654 4555 77777778
Q ss_pred CCcEEEECCCc-hhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHH
Q psy2960 283 KPKLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTE 361 (405)
Q Consensus 283 g~Dvvld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (405)
++|++|||+|+ .....++++|+++|+++.+|........++...++.+++++.|+++++ .++++++++
T Consensus 233 ~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~-----------~~~~~~~~~ 301 (306)
T cd08258 233 GADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSST-----------PASWETALR 301 (306)
T ss_pred CCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCc-----------hHhHHHHHH
Confidence 89999999975 455678999999999999997653334556666778999999999865 334778888
Q ss_pred HHHcC
Q psy2960 362 MMRTG 366 (405)
Q Consensus 362 ~~~~g 366 (405)
++++|
T Consensus 302 ~~~~~ 306 (306)
T cd08258 302 LLASG 306 (306)
T ss_pred HHhcC
Confidence 88765
No 120
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=100.00 E-value=5.9e-35 Score=272.85 Aligned_cols=287 Identities=23% Similarity=0.345 Sum_probs=240.7
Q ss_pred CeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCCCCCCEEEecCCCCCcccceEeecccceE
Q psy2960 101 HEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSLAVGDHVIPDTQHLGTWRNYGKFNHDVLM 180 (405)
Q Consensus 101 ~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~G~~a~~~~v~~~~~~ 180 (405)
+||+||+.++++|++|++.+.|.++ .+|.++|||++|+|+++|++++.+++||+|++.. .|+|++|+.++.+.++
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~---~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~--~g~~~~~~~~~~~~~~ 75 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP---GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA--PGAFATHVRVDARLVV 75 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC---CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe--cCcccceEEechhheE
Confidence 5899999999999999999988652 4578999999999999999999999999999883 5899999999999999
Q ss_pred EcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHH
Q psy2960 181 KVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS 260 (405)
Q Consensus 181 ~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~ 260 (405)
++|+++++.+++.+++++.|+|.++.+...+++|++|+|+|++|++|++++|+|+.+|+++++++++. ++.+.+++
T Consensus 76 ~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~----~~~~~~~~ 151 (293)
T cd05195 76 KIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSE----EKREFLRE 151 (293)
T ss_pred eCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHH
Confidence 99999999999999999999999998888999999999999999999999999999999999887554 34566677
Q ss_pred cC--CcEEeChhh--HHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEEeccCCCC-cccCcccccccCeEE
Q psy2960 261 LG--ADYVFTEEE--LRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREP-VQIPTSAFIFKDITL 334 (405)
Q Consensus 261 lg--~~~v~~~~d--~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~k~~~~ 334 (405)
+| ++.+++..+ +.+ +.+.+.+.++|+++||+|+.....++++++++|+++.+|...... ..+.. ..+.+++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~ 230 (293)
T cd05195 152 LGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGM-RPFLRNVSF 230 (293)
T ss_pred hCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccch-hhhccCCeE
Confidence 77 677777543 445 777777889999999999987788899999999999998543321 12222 234467888
Q ss_pred EEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEE
Q psy2960 335 RGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 401 (405)
Q Consensus 335 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl 401 (405)
....+..+....+ ....+.+.++.++++++.+++..+..|+++++++||+.+. .++..+|+|+
T Consensus 231 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~ivv 293 (293)
T cd05195 231 SSVDLDQLARERP--ELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQ--SGKHIGKVVL 293 (293)
T ss_pred EEEeHHHHhhhCh--HHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHh--cCCCCceecC
Confidence 8877655433222 4446678899999999999988888999999999999999 7888888874
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.3e-34 Score=275.01 Aligned_cols=306 Identities=25% Similarity=0.321 Sum_probs=237.8
Q ss_pred ccCCCCccc-eEeeeecCCCCCCCeEEEEEEEeecChhhhhhhcccCCC--CCCCCCCCccceEEEEEEEcCCCCCCCCC
Q psy2960 79 NQHGTPLRV-VTVENETLNSVQKHEVVVKMLVAPVNPADINTIQGVYPI--KPTLPAVPGFEGVGEVVEVGSDVSSLAVG 155 (405)
Q Consensus 79 ~~~g~~~~~-l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~~lG~E~~G~V~~vG~~v~~~~~G 155 (405)
+..+++... +.+.+.|.|+++++||+|++.++++|++|++...|.++. ....|..+|||++|+|+++|++++++++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~G 83 (319)
T cd08267 4 TRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVG 83 (319)
T ss_pred CCCCChhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCC
Confidence 344444332 278889999999999999999999999999998876532 12346789999999999999999999999
Q ss_pred CEEEecCC--CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHH
Q psy2960 156 DHVIPDTQ--HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQI 233 (405)
Q Consensus 156 drV~~~~~--~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiql 233 (405)
|+|++... ..|+|++|+.++.+.++++|+++++++++.+++++.+||+++.....+++|++|+|+|++|++|++++++
T Consensus 84 d~V~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~l 163 (319)
T cd08267 84 DEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQI 163 (319)
T ss_pred CEEEEeccCCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHH
Confidence 99998742 3589999999999999999999999999999999999999998877899999999999999999999999
Q ss_pred HHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCCchhH--HHHHHhcccCCEEEE
Q psy2960 234 ARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVGGNSA--TNLLRTLVSKGVMVT 311 (405)
Q Consensus 234 a~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g~~~~--~~~~~~l~~~G~~v~ 311 (405)
|+.+|+++++++++ ++.+.++++|.+++++.+........+.+.++|+++||+|+... ...+..++++|+++.
T Consensus 164 a~~~g~~v~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~ 238 (319)
T cd08267 164 AKALGAHVTGVCST-----RNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVS 238 (319)
T ss_pred HHHcCCEEEEEeCH-----HHHHHHHHcCCCEeecCCCCCcchhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEE
Confidence 99999999888743 23567788999888875431111344556789999999995422 334445999999999
Q ss_pred EeccCCCCcccC---cccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHH
Q psy2960 312 YGGMSREPVQIP---TSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNT 388 (405)
Q Consensus 312 ~g~~~~~~~~~~---~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~ 388 (405)
+|.......... ..........+...... + . .+.+.+++++++++.+.+.++++|+++++++||+.+
T Consensus 239 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~ 308 (319)
T cd08267 239 VGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAK------P--N--AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRL 308 (319)
T ss_pred eccccccccccccccchhhccccceEEEEEec------C--C--HHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHH
Confidence 985432221111 01111122222222211 1 1 456888899999999988888999999999999999
Q ss_pred hhhcCCCCceEEE
Q psy2960 389 MSIQGKSGVKYYI 401 (405)
Q Consensus 389 ~~~~~~~~gKvvl 401 (405)
. +++..+|+++
T Consensus 309 ~--~~~~~~~vvv 319 (319)
T cd08267 309 K--SGRARGKVVI 319 (319)
T ss_pred h--cCCCCCcEeC
Confidence 9 7788888874
No 122
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=1.4e-34 Score=270.17 Aligned_cols=233 Identities=19% Similarity=0.213 Sum_probs=191.7
Q ss_pred CCccceEEEEEEEcCCCC------CCCCCCEEEecCC---------------------------------CCCcccceEe
Q psy2960 133 VPGFEGVGEVVEVGSDVS------SLAVGDHVIPDTQ---------------------------------HLGTWRNYGK 173 (405)
Q Consensus 133 ~lG~E~~G~V~~vG~~v~------~~~~GdrV~~~~~---------------------------------~~G~~a~~~~ 173 (405)
++|||++|+|+++|++|+ ++++||||+..+. .+|+|+||+.
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 589999999999999999 8999999976320 2489999999
Q ss_pred eccc-ceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchH
Q psy2960 174 FNHD-VLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDID 252 (405)
Q Consensus 174 v~~~-~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~ 252 (405)
+++. .++++|+++++++|+.+++++.|+|+++.. ....+|++|||+|+ |++|++++|+|+++|++++++++ ..+
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~---~~~ 155 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAAD---PSP 155 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC---CCH
Confidence 9998 799999999999999999999999999976 56679999999987 99999999999999998444442 234
Q ss_pred HHHHHHHHcCCcEEeChhhHHH-HhhhcCCCCCcEEEECCCchh-HHHHHHhcccCCEEEEEeccC-CCCcccCcccccc
Q psy2960 253 KLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKLALNCVGGNS-ATNLLRTLVSKGVMVTYGGMS-REPVQIPTSAFIF 329 (405)
Q Consensus 253 ~~~~~~~~lg~~~v~~~~d~~~-i~~~t~g~g~Dvvld~~g~~~-~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~ 329 (405)
++++.++++|++.++++++..+ +.+.+.+.++|++|||+|... +..++++++++|+++.+|... ..+.+++...++.
T Consensus 156 ~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~ 235 (280)
T TIGR03366 156 DRRELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVR 235 (280)
T ss_pred HHHHHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHh
Confidence 5688999999999998766545 777787889999999998765 567899999999999999653 2344566777888
Q ss_pred cCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcC--ccc--CCcceeeehhhH
Q psy2960 330 KDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTG--KLA--APAHKFVTLKNF 381 (405)
Q Consensus 330 k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~l~--~~~~~~~~~~~~ 381 (405)
|++++.|++... .+.++++++++.++ ++. +.++++||++|+
T Consensus 236 ~~~~i~g~~~~~-----------~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 236 RWLTIRGVHNYE-----------PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred CCcEEEecCCCC-----------HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 999999986532 23478888888874 443 457899999874
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=100.00 E-value=1.5e-33 Score=262.97 Aligned_cols=281 Identities=25% Similarity=0.377 Sum_probs=233.5
Q ss_pred EEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCCCCCCEEEecCCCCCcccceEeecccceEEcCC
Q psy2960 105 VKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSLAVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPK 184 (405)
Q Consensus 105 Vkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~ 184 (405)
||+.++++|++|++...|.++ .|.++|||++|+|+++|++++.+++||+|++.. .|+|++|+.++.+.++++|+
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~--~g~~~~~~~~~~~~~~~~p~ 75 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA--PGSFATYVRTDARLVVPIPD 75 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc--CCceeeEEEccHHHeEECCC
Confidence 899999999999999988654 267899999999999999999999999999883 48999999999999999999
Q ss_pred CCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCC-
Q psy2960 185 DIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA- 263 (405)
Q Consensus 185 ~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~- 263 (405)
++++++++++++++.|+|+++...+.+++|++|+|+|++|++|++++++|+.+|+++++++++.+ +++.++++|+
T Consensus 76 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~g~~ 151 (288)
T smart00829 76 GLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPE----KRDFLRELGIP 151 (288)
T ss_pred CCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHcCCC
Confidence 99999999999999999999977789999999999999999999999999999999988876543 4667788998
Q ss_pred -cEEeChh--hHHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEEeccCCC-CcccCcccccccCeEEEEEe
Q psy2960 264 -DYVFTEE--ELRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSRE-PVQIPTSAFIFKDITLRGHW 338 (405)
Q Consensus 264 -~~v~~~~--d~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~k~~~~~g~~ 338 (405)
+.+++.. ++.+ +.+.+.++++|+++|++|+.....++++++++|+++.+|..... ...++... +.+++++.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~ 230 (288)
T smart00829 152 DDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVD 230 (288)
T ss_pred hhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhh-hcCCceEEEEE
Confidence 7777654 3444 77777777899999999987777889999999999999854321 12233323 45788888877
Q ss_pred cchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEE
Q psy2960 339 MTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 401 (405)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl 401 (405)
+..+. .. +....+.+.++.++++++.+.+...+.|++++++++++.+. .++..+|+++
T Consensus 231 ~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ivv 288 (288)
T smart00829 231 LDALE-EG--PDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQ--QGKHIGKVVL 288 (288)
T ss_pred HHHhh-cC--hHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHh--cCCCcceEeC
Confidence 65432 11 23345567888999999998877778899999999999998 7777788874
No 124
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=8e-32 Score=249.59 Aligned_cols=234 Identities=31% Similarity=0.452 Sum_probs=198.3
Q ss_pred eEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCCCCCCEEEecCC------------------
Q psy2960 102 EVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSLAVGDHVIPDTQ------------------ 163 (405)
Q Consensus 102 eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~~GdrV~~~~~------------------ 163 (405)
||+|+|.++++|+.|++...|..+....+|.++|||++|+|+++|++++.|++||+|++...
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 80 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI 80 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence 68999999999999999998876533456889999999999999999999999999998742
Q ss_pred ----CCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCC
Q psy2960 164 ----HLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL 239 (405)
Q Consensus 164 ----~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~ 239 (405)
..|+|++|+.++.+.++++|+++++++++.++.++.|||+++.....+++|++|||+|+++ +|++++++++..|+
T Consensus 81 ~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~ 159 (271)
T cd05188 81 LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGA 159 (271)
T ss_pred eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCC
Confidence 2689999999999999999999999999999999999999998877779999999999966 99999999999999
Q ss_pred cEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCCCCcEEEECCCc-hhHHHHHHhcccCCEEEEEecc
Q psy2960 240 KTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIPKPKLALNCVGG-NSATNLLRTLVSKGVMVTYGGM 315 (405)
Q Consensus 240 ~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~g~Dvvld~~g~-~~~~~~~~~l~~~G~~v~~g~~ 315 (405)
+++++++++ .+.+.++++|++++++..+ ... +. .+.+.++|+++|++++ .....++++++++|+++.+|..
T Consensus 160 ~v~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~ 234 (271)
T cd05188 160 RVIVTDRSD----EKLELAKELGADHVIDYKEEDLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGT 234 (271)
T ss_pred eEEEEcCCH----HHHHHHHHhCCceeccCCcCCHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccC
Confidence 998887553 3466778899988887654 333 44 5667789999999998 6667789999999999999965
Q ss_pred CCCCcccCcccccccCeEEEEEecch
Q psy2960 316 SREPVQIPTSAFIFKDITLRGHWMTR 341 (405)
Q Consensus 316 ~~~~~~~~~~~~~~k~~~~~g~~~~~ 341 (405)
............+.+++++.++..+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (271)
T cd05188 235 SGGPPLDDLRRLLFKELTIIGSTGGT 260 (271)
T ss_pred CCCCCcccHHHHHhcceEEEEeecCC
Confidence 44332222445677999999988754
No 125
>KOG1196|consensus
Probab=100.00 E-value=1.6e-30 Score=230.15 Aligned_cols=315 Identities=21% Similarity=0.272 Sum_probs=241.2
Q ss_pred ceeEEEEccC--CCCc-cceEee--eecC-CCCCCCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCc----cceEEE
Q psy2960 72 LANKLVYNQH--GTPL-RVVTVE--NETL-NSVQKHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPG----FEGVGE 141 (405)
Q Consensus 72 ~~~a~~~~~~--g~~~-~~l~~~--~~~~-p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG----~E~~G~ 141 (405)
+.++|++..+ |-|. +.+.+. +.++ .++++++||||..|-+..|.-...+.-..+.....|+.+| ..++|+
T Consensus 3 ~nkqvvLk~y~~g~P~~~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~k 82 (343)
T KOG1196|consen 3 TNKQVILKNYVTGFPTESDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAK 82 (343)
T ss_pred cccEEEEeccCCCCCccccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEE
Confidence 4566666652 3332 233333 3333 3569999999999999998766544432222112344444 267899
Q ss_pred EEEEcCCCCCCCCCCEEEecCCCCCcccceEeecccc--eEEcCC--CCChhh-hccCCCcHHHHHHHHHhhcCCCCCCE
Q psy2960 142 VVEVGSDVSSLAVGDHVIPDTQHLGTWRNYGKFNHDV--LMKVPK--DIALTE-ISGITSNPCTAYRMLKDYNSLSPGDV 216 (405)
Q Consensus 142 V~~vG~~v~~~~~GdrV~~~~~~~G~~a~~~~v~~~~--~~~iP~--~~s~~~-Aa~~~~~~~ta~~al~~~~~~~~g~~ 216 (405)
|++. +-+++++||.|.++. +|.||.+++... .+++|. +.++.. ..++..+.+|||.++++.+..++|++
T Consensus 83 Vi~S--~~~~~~~GD~v~g~~----gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geT 156 (343)
T KOG1196|consen 83 VIDS--GHPNYKKGDLVWGIV----GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGET 156 (343)
T ss_pred EEec--CCCCCCcCceEEEec----cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCE
Confidence 9994 567899999999993 799999998754 344443 333332 35677789999999999999999999
Q ss_pred EEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHH-HHcCCcEEeChhh---HHHHhhhcCCCCCcEEEECCC
Q psy2960 217 VIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYVFTEEE---LRNISRDASIPKPKLALNCVG 292 (405)
Q Consensus 217 VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~-~~lg~~~v~~~~d---~~~i~~~t~g~g~Dvvld~~g 292 (405)
|+|.||+|++|+.+.|+|+.+||+|++.++|+|+. ..+ .++|.|..+|+.+ ..+..+.+-..|+|+.||.+|
T Consensus 157 v~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv----~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVG 232 (343)
T KOG1196|consen 157 VFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKV----DLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVG 232 (343)
T ss_pred EEEeeccchhHHHHHHHHHhcCCEEEEecCChhhh----hhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccC
Confidence 99999999999999999999999999999998763 444 3679999999854 344333355789999999999
Q ss_pred chhHHHHHHhcccCCEEEEEeccCCCCccc-----CcccccccCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCc
Q psy2960 293 GNSATNLLRTLVSKGVMVTYGGMSREPVQI-----PTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGK 367 (405)
Q Consensus 293 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 367 (405)
+..+.+.+..|+..||++.+|..+..+.+. +....+.|++++.|+...++. +...+.++.+..++++|+
T Consensus 233 G~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~------d~~~k~ld~l~~~ikegK 306 (343)
T KOG1196|consen 233 GKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYL------DKYPKFLDFLLPYIKEGK 306 (343)
T ss_pred cHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechh------hhhHHHHHHHHHHHhcCc
Confidence 999999999999999999999876443322 224567899999998876654 445678899999999999
Q ss_pred ccCCcceeeehhhHHHHHHHHhhhcCCCCceEEEEec
Q psy2960 368 LAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 404 (405)
Q Consensus 368 l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl~~~ 404 (405)
|+-..+..-.|++.+.||.-|. +|+..||.++++.
T Consensus 307 I~y~edi~~Glen~P~A~vglf--~GkNvGKqiv~va 341 (343)
T KOG1196|consen 307 ITYVEDIADGLENGPSALVGLF--HGKNVGKQLVKVA 341 (343)
T ss_pred eEEehhHHHHHhccHHHHHHHh--ccCcccceEEEee
Confidence 9987666778999999999999 9999999999874
No 126
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.97 E-value=1.4e-30 Score=242.77 Aligned_cols=259 Identities=20% Similarity=0.286 Sum_probs=203.1
Q ss_pred ccCCCCCCCCCCCccceEEEEEEEcCCCCCCCCCCEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHH
Q psy2960 122 GVYPIKPTLPAVPGFEGVGEVVEVGSDVSSLAVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTA 201 (405)
Q Consensus 122 g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta 201 (405)
|.+|. ++|.++|||++|+|+++|++++++++||+|+++ +.|++|+.++.+.++++|+++++++++.+ ++++||
T Consensus 14 ~~~~~--~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta 86 (277)
T cd08255 14 GTEKL--PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATA 86 (277)
T ss_pred cCccC--cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec----CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHH
Confidence 55555 478999999999999999999999999999988 47999999999999999999999999998 789999
Q ss_pred HHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHHcC-CcEEeChhhHHHHhhhc
Q psy2960 202 YRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLG-ADYVFTEEELRNISRDA 279 (405)
Q Consensus 202 ~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~~~~lg-~~~v~~~~d~~~i~~~t 279 (405)
|+++. .+++++|++|||+|+ |++|++++++|+++|++ ++++.+++ ++++.++++| ++.+++..+ ..+
T Consensus 87 ~~~~~-~~~~~~g~~vlI~g~-g~vg~~~i~~a~~~g~~~vi~~~~~~----~~~~~~~~~g~~~~~~~~~~-----~~~ 155 (277)
T cd08255 87 LNGVR-DAEPRLGERVAVVGL-GLVGLLAAQLAKAAGAREVVGVDPDA----ARRELAEALGPADPVAADTA-----DEI 155 (277)
T ss_pred HHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEECCCH----HHHHHHHHcCCCccccccch-----hhh
Confidence 99986 589999999999975 99999999999999999 87776543 3466788888 565554322 123
Q ss_pred CCCCCcEEEECCCc-hhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccH-HHHHHHHH
Q psy2960 280 SIPKPKLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKES-AERKSMMN 357 (405)
Q Consensus 280 ~g~g~Dvvld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~-~~~~~~~~ 357 (405)
.+.++|++|||++. .....++++++++|+++.+|..... .......+..+.+++.+..+..+....+.+ ....+.++
T Consensus 156 ~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (277)
T cd08255 156 GGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLE 234 (277)
T ss_pred cCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC-ccccHHHHHhccCeEEeecccccccccccccccccccHH
Confidence 46689999999885 4556789999999999999865433 111122344466788887665432222110 11235688
Q ss_pred HHHHHHHcCcccCCcceeeehhhHHHHHHHHhhhcC-CCCceEEE
Q psy2960 358 ELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQG-KSGVKYYI 401 (405)
Q Consensus 358 ~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~-~~~gKvvl 401 (405)
++++++++|.+++.+.++|+++++++||+.+. ++ ....|+++
T Consensus 235 ~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~--~~~~~~~k~~~ 277 (277)
T cd08255 235 EALDLLAEGRLEALITHRVPFEDAPEAYRLLF--EDPPECLKVVL 277 (277)
T ss_pred HHHHHHHcCCccccccCccCHHHHHHHHHHHH--cCCccceeeeC
Confidence 89999999999888889999999999999998 54 45677764
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.78 E-value=9e-19 Score=139.42 Aligned_cols=83 Identities=34% Similarity=0.494 Sum_probs=71.3
Q ss_pred CCeEEEEEEEeecChhhhhhhcccCCCCCCCCCCCccceEEEEEEEcCCCCCCCCCCEEEecC-----------------
Q psy2960 100 KHEVVVKMLVAPVNPADINTIQGVYPIKPTLPAVPGFEGVGEVVEVGSDVSSLAVGDHVIPDT----------------- 162 (405)
Q Consensus 100 ~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~~lG~E~~G~V~~vG~~v~~~~~GdrV~~~~----------------- 162 (405)
|+||||||+++|||++|++.+.|.......+|.++|||++|+|+++|+++++|++||||++.+
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 689999999999999999999995444457899999999999999999999999999999853
Q ss_pred ---------CCCCcccceEeecccceEEc
Q psy2960 163 ---------QHLGTWRNYGKFNHDVLMKV 182 (405)
Q Consensus 163 ---------~~~G~~a~~~~v~~~~~~~i 182 (405)
..+|+|+||+.+++++++|+
T Consensus 81 c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred CCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 23699999999999999885
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.72 E-value=4.9e-17 Score=133.72 Aligned_cols=113 Identities=27% Similarity=0.472 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HHH-HhhhcCCCCCcEEEECCC-chhHHHHH
Q psy2960 225 ACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIPKPKLALNCVG-GNSATNLL 300 (405)
Q Consensus 225 ~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~~-i~~~t~g~g~Dvvld~~g-~~~~~~~~ 300 (405)
|+|++++|+|+++|++++++.++ +.+++.++++|+++++++++ +.+ +++.+++.++|+||||+| .+.+..++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~----~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~ 76 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRS----EEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI 76 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESS----HHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCEEEEEECC----HHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHH
Confidence 68999999999999999988754 45689999999999998754 666 999998899999999999 56667889
Q ss_pred HhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecch
Q psy2960 301 RTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTR 341 (405)
Q Consensus 301 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~ 341 (405)
++++++|+++.+|........++...++.+++++.|++.++
T Consensus 77 ~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 117 (130)
T PF00107_consen 77 KLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGS 117 (130)
T ss_dssp HHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGG
T ss_pred HHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCC
Confidence 99999999999997765666778888999999999999875
No 129
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.53 E-value=5e-15 Score=121.22 Aligned_cols=124 Identities=27% Similarity=0.373 Sum_probs=81.2
Q ss_pred cCCcEEeChhhHHHHhhhcCCCCCcEEEECCC--chhH-HHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEE
Q psy2960 261 LGADYVFTEEELRNISRDASIPKPKLALNCVG--GNSA-TNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGH 337 (405)
Q Consensus 261 lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~ 337 (405)
||+++++|+++.. + +.+.++|+||||+| ++.. ..++++| ++|+++.++. .........+...+...
T Consensus 1 LGAd~vidy~~~~-~---~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~------~~~~~~~~~~~~~~~~~ 69 (127)
T PF13602_consen 1 LGADEVIDYRDTD-F---AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG------DLPSFARRLKGRSIRYS 69 (127)
T ss_dssp CT-SEEEETTCSH-H---HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S------HHHHHHHHHHCHHCEEE
T ss_pred CCcCEEecCCCcc-c---cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC------cccchhhhhcccceEEE
Confidence 6999999887422 3 44789999999999 6555 4556888 9999999984 11111111233344444
Q ss_pred ecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHHhhhcCCCCceEEE
Q psy2960 338 WMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 401 (405)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~~~~~~~~gKvvl 401 (405)
.+...... ....+.++++.+++++|+|+|.+.++||++++++|++.++ ++++.||+||
T Consensus 70 ~~~~~~~~----~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~--~~~~~GKvVl 127 (127)
T PF13602_consen 70 FLFSVDPN----AIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLE--SGHARGKVVL 127 (127)
T ss_dssp CCC-H--H----HHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHH--CT--SSEEEE
T ss_pred EEEecCCC----chHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHH--hCCCCCeEeC
Confidence 43321100 1235669999999999999999999999999999999999 9999999997
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.37 E-value=1.3e-11 Score=119.21 Aligned_cols=175 Identities=13% Similarity=0.101 Sum_probs=127.9
Q ss_pred HHHHHHhhcC-CCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhc
Q psy2960 201 AYRMLKDYNS-LSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDA 279 (405)
Q Consensus 201 a~~al~~~~~-~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t 279 (405)
.+.++.+..+ ..+|++|+|.|+ |.+|+.+++.++.+|++|+++- ..+.+++.++.+|++.+ +.++. +
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d----~d~~R~~~A~~~G~~~~-~~~e~--v---- 255 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTE----VDPICALQAAMEGYEVM-TMEEA--V---- 255 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE----CChhhHHHHHhcCCEEc-cHHHH--H----
Confidence 3455544334 368999999999 9999999999999999877753 23456788889998544 22111 2
Q ss_pred CCCCCcEEEECCCchhH-HHH-HHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHH
Q psy2960 280 SIPKPKLALNCVGGNSA-TNL-LRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMN 357 (405)
Q Consensus 280 ~g~g~Dvvld~~g~~~~-~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~ 357 (405)
.++|+|++|+|.... ... +++++++|+++.+|.. +.+++...+..+++++.++..+.. ...++
T Consensus 256 --~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~---~~eId~~~L~~~el~i~g~~~~~~----------~~~~~ 320 (413)
T cd00401 256 --KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF---DVEIDVKGLKENAVEVVNIKPQVD----------RYELP 320 (413)
T ss_pred --cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC---CCccCHHHHHhhccEEEEccCCcc----------eEEcC
Confidence 257999999998765 344 8999999999999943 446777778889999998775421 01233
Q ss_pred --HHHHHHHcCcc-c--CCccee-----eehh-hHHHHHHHHhhhcCC-CCceEEEEec
Q psy2960 358 --ELTEMMRTGKL-A--APAHKF-----VTLK-NFQEALMNTMSIQGK-SGVKYYIDFR 404 (405)
Q Consensus 358 --~~~~~~~~g~l-~--~~~~~~-----~~~~-~~~~A~~~~~~~~~~-~~gKvvl~~~ 404 (405)
+.+.++++|++ . +.+++. |+|+ |+.++|+.+. ++. ...|+++.++
T Consensus 321 ~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~--~~~~~~~kV~~~p~ 377 (413)
T cd00401 321 DGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWT--NRDKYEVGVYFLPK 377 (413)
T ss_pred CcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHh--cCCcCCCcEEECCH
Confidence 57899999998 3 446677 8899 9999999998 544 3467776653
No 131
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.34 E-value=3.2e-11 Score=119.40 Aligned_cols=246 Identities=15% Similarity=0.173 Sum_probs=145.1
Q ss_pred CeEEEEEEEe-ecChhhhhhhc-ccCCCCCCCCCCCccceEEEEEEEcCC----CCCCCCCCEEEecCCCCCcccc----
Q psy2960 101 HEVVVKMLVA-PVNPADINTIQ-GVYPIKPTLPAVPGFEGVGEVVEVGSD----VSSLAVGDHVIPDTQHLGTWRN---- 170 (405)
Q Consensus 101 ~eVlVkv~a~-gi~~~D~~~~~-g~~~~~~~~p~~lG~E~~G~V~~vG~~----v~~~~~GdrV~~~~~~~G~~a~---- 170 (405)
.+|+|+--|. +.+++|-.+.. |..-.. . .-+.. +-+|..|.+- +..++.|..++++... ..-.+
T Consensus 31 ~~V~VE~gAG~~a~fsD~~Y~~aGA~I~~-~-~~v~~---~diilkV~~P~~~e~~~l~~g~~li~~l~p-~~~~~l~~~ 104 (509)
T PRK09424 31 FEVVVESGAGQLASFDDAAYREAGAEIVD-G-AAVWQ---SDIILKVNAPSDDEIALLREGATLVSFIWP-AQNPELLEK 104 (509)
T ss_pred CEEEEeCCCCcCCCCCHHHHHHCCCEEec-C-ccccc---CCEEEEeCCCCHHHHHhcCCCCEEEEEeCc-ccCHHHHHH
Confidence 5677776653 55777866554 421110 1 11222 4556666443 2468999999988532 11111
Q ss_pred -----eEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHh----h----------cCCCCCCEEEEeCCCcHHHHHHH
Q psy2960 171 -----YGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKD----Y----------NSLSPGDVVIQNGANSACGQNVI 231 (405)
Q Consensus 171 -----~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~----~----------~~~~~g~~VLI~ga~G~vG~~ai 231 (405)
...+.-+.+-++.+.-++. +.-+.+-...|.++.. . ++..+|++|+|.|+ |.+|++++
T Consensus 105 l~~~~it~ia~e~vpr~sraq~~d--~lssma~IAGy~Av~~aa~~~~~~~~g~~taaG~~pg~kVlViGa-G~iGL~Ai 181 (509)
T PRK09424 105 LAARGVTVLAMDAVPRISRAQSLD--ALSSMANIAGYRAVIEAAHEFGRFFTGQITAAGKVPPAKVLVIGA-GVAGLAAI 181 (509)
T ss_pred HHHcCCEEEEeecccccccCCCcc--cccchhhhhHHHHHHHHHHHhcccCCCceeccCCcCCCEEEEECC-cHHHHHHH
Confidence 1111222232222221111 1111222333443322 1 13468999999999 99999999
Q ss_pred HHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eChh---------------hHHH-Hhhh-cC-CCCCcEEEECCC
Q psy2960 232 QIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEE---------------ELRN-ISRD-AS-IPKPKLALNCVG 292 (405)
Q Consensus 232 qla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~---------------d~~~-i~~~-t~-g~g~Dvvld~~g 292 (405)
+.|+.+|++|+++ +.++++++.++++|++.+ +|.. ++.+ ..+. ++ .+++|+||+|+|
T Consensus 182 ~~Ak~lGA~V~a~----D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIetag 257 (509)
T PRK09424 182 GAAGSLGAIVRAF----DTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTAL 257 (509)
T ss_pred HHHHHCCCEEEEE----eCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECCC
Confidence 9999999976666 445677899999999855 5432 1111 2222 22 257999999999
Q ss_pred chh-------HHHHHHhcccCCEEEEEeccCCCC--cccCcccccc-cCeEEEEEecchhhhhhccHHHHHHHHHHHHHH
Q psy2960 293 GNS-------ATNLLRTLVSKGVMVTYGGMSREP--VQIPTSAFIF-KDITLRGHWMTRWQKENKESAERKSMMNELTEM 362 (405)
Q Consensus 293 ~~~-------~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~-k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (405)
.+. ..++++.++++|+++.+|...+.+ .+.+...++. +++++.|++... .+......++
T Consensus 258 ~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P-----------~~~p~~As~l 326 (509)
T PRK09424 258 IPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLP-----------SRLPTQSSQL 326 (509)
T ss_pred CCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCc-----------hhHHHHHHHH
Confidence 632 367899999999999999643333 3444455665 899999976321 1222346677
Q ss_pred HHcCcccC
Q psy2960 363 MRTGKLAA 370 (405)
Q Consensus 363 ~~~g~l~~ 370 (405)
+.++.++.
T Consensus 327 la~~~i~l 334 (509)
T PRK09424 327 YGTNLVNL 334 (509)
T ss_pred HHhCCccH
Confidence 77776654
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.50 E-value=5.5e-06 Score=82.25 Aligned_cols=122 Identities=15% Similarity=0.204 Sum_probs=83.8
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eCh---------------hhHHH-
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTE---------------EELRN- 274 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~---------------~d~~~- 274 (405)
.++++|+|.|+ |.+|++++++|+.+|++|+++.. +..+++.++++|++.+ ++. +++.+
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~----~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~ 236 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDT----RPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAA 236 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHH
Confidence 46799999999 99999999999999999777643 3446888889998763 232 12222
Q ss_pred HhhhcC--CCCCcEEEECC---Cchh----HHHHHHhcccCCEEEEEeccCCCCcccC-cccccc--cCeEEEEEe
Q psy2960 275 ISRDAS--IPKPKLALNCV---GGNS----ATNLLRTLVSKGVMVTYGGMSREPVQIP-TSAFIF--KDITLRGHW 338 (405)
Q Consensus 275 i~~~t~--g~g~Dvvld~~---g~~~----~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~--k~~~~~g~~ 338 (405)
.++.+. ..++|+||+|+ |... ..+.++.+++|+.++.++...+.+.... +...+. .++++.+..
T Consensus 237 ~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E~t~p~~~~~~~~GV~~~gv~ 312 (511)
T TIGR00561 237 EMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCEYTKPGEVYTTENQVKVIGYT 312 (511)
T ss_pred HHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEEEecCceEEEecCCEEEEeeC
Confidence 222222 46799999999 6432 3567899999999999986555443321 112222 247777754
No 133
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.35 E-value=3.7e-06 Score=78.08 Aligned_cols=173 Identities=17% Similarity=0.202 Sum_probs=93.8
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc--EEEEecCCcchHHHHHHHHHcCCcEEe-ChhhHHHHhhhcCCCCCc
Q psy2960 209 NSLSPGDVVIQNGANSACGQNVIQIARHWGLK--TINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRNISRDASIPKPK 285 (405)
Q Consensus 209 ~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~--v~~~~~~~~~~~~~~~~~~~lg~~~v~-~~~d~~~i~~~t~g~g~D 285 (405)
+++++|++||..|+ |+ |..++++++..|.. ++++-.+++..+...+.....|.+.+- -..++..+. . ....+|
T Consensus 73 ~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~-~-~~~~fD 148 (272)
T PRK11873 73 AELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALP-V-ADNSVD 148 (272)
T ss_pred ccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCC-C-CCCcee
Confidence 57889999999998 55 88888889888764 666543333322222233334543321 112222211 1 134799
Q ss_pred EEEECC------C-chhHHHHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEEecchhhhhhccHHHHHHHHHH
Q psy2960 286 LALNCV------G-GNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNE 358 (405)
Q Consensus 286 vvld~~------g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 358 (405)
+|+... . ...+..+.+.|+|+|+++..+.....+ .+ ..+.+...+.+...... ...++
T Consensus 149 ~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~--~~--~~~~~~~~~~~~~~~~~-----------~~~~e 213 (272)
T PRK11873 149 VIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGE--LP--EEIRNDAELYAGCVAGA-----------LQEEE 213 (272)
T ss_pred EEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCC--CC--HHHHHhHHHHhccccCC-----------CCHHH
Confidence 998543 1 134567889999999999876433221 11 11112222221111110 01233
Q ss_pred HHHHHHc-Cc--ccCCcceeeehhhHHHHHHHH--hhhcCCCCceEEEE
Q psy2960 359 LTEMMRT-GK--LAAPAHKFVTLKNFQEALMNT--MSIQGKSGVKYYID 402 (405)
Q Consensus 359 ~~~~~~~-g~--l~~~~~~~~~~~~~~~A~~~~--~~~~~~~~gKvvl~ 402 (405)
+.+++++ |- +.......++++++.++++.+ . .++..++.+..
T Consensus 214 ~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~ 260 (272)
T PRK11873 214 YLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIA--PGRQLDGYIVS 260 (272)
T ss_pred HHHHHHHCCCCceEEEeccceecccHHHHHHHhccc--cccccCceEEE
Confidence 4455554 32 223345678899999999988 6 55555555543
No 134
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.20 E-value=2.7e-05 Score=75.90 Aligned_cols=102 Identities=15% Similarity=0.186 Sum_probs=73.0
Q ss_pred HHHHHHhhcCCC-CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhc
Q psy2960 201 AYRMLKDYNSLS-PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDA 279 (405)
Q Consensus 201 a~~al~~~~~~~-~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t 279 (405)
+|.++....++. .|++|+|.|. |.+|..+++.++.+|++|+++-.++ .+...+...|++ +.+. .++.
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp----~ra~~A~~~G~~-v~~l---~eal--- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDP----ICALQAAMDGFR-VMTM---EEAA--- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCc----hhhHHHHhcCCE-ecCH---HHHH---
Confidence 566666543554 8999999999 9999999999999999877764332 223344455664 3332 2211
Q ss_pred CCCCCcEEEECCCchhHH--HHHHhcccCCEEEEEeccC
Q psy2960 280 SIPKPKLALNCVGGNSAT--NLLRTLVSKGVMVTYGGMS 316 (405)
Q Consensus 280 ~g~g~Dvvld~~g~~~~~--~~~~~l~~~G~~v~~g~~~ 316 (405)
.++|+|++|+|..... ..+..+++++.++.+|..+
T Consensus 266 --~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 266 --ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred --hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 2689999999986653 4688999999999998654
No 135
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=98.16 E-value=0.0006 Score=63.45 Aligned_cols=244 Identities=16% Similarity=0.170 Sum_probs=132.9
Q ss_pred CCCCCccceEEEEEEEcCCCCCCCCCCEEEecCCC------------CC--------------cccceEeecccceEEcC
Q psy2960 130 LPAVPGFEGVGEVVEVGSDVSSLAVGDHVIPDTQH------------LG--------------TWRNYGKFNHDVLMKVP 183 (405)
Q Consensus 130 ~p~~lG~E~~G~V~~vG~~v~~~~~GdrV~~~~~~------------~G--------------~~a~~~~v~~~~~~~iP 183 (405)
..++|=.-+ ++|++ +.+.++.+|.||.++.+. .+ .|.+|..+..+..+.
T Consensus 30 wG~vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~-- 104 (314)
T PF11017_consen 30 WGIVPVWGF-ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYD-- 104 (314)
T ss_pred CcccccceE-EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccC--
Confidence 344454444 56666 788899999999998531 11 222333332222110
Q ss_pred CCCChhh-hccCCCcHHHHHHHHHhh--cCCCCCCEEEEeCCCcHHHHHHHHHHH--HcCCcEEEEecCCcchHHHHHHH
Q psy2960 184 KDIALTE-ISGITSNPCTAYRMLKDY--NSLSPGDVVIQNGANSACGQNVIQIAR--HWGLKTINIVRNRDDIDKLKSYL 258 (405)
Q Consensus 184 ~~~s~~~-Aa~~~~~~~ta~~al~~~--~~~~~g~~VLI~ga~G~vG~~aiqla~--~~G~~v~~~~~~~~~~~~~~~~~ 258 (405)
-+.++ -+.+-..+.|.|..-.-. -+--..+.|+|.+|++-.++..+..++ .-+.+++.+++..+ ..+.
T Consensus 105 --~~~e~~~~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N-----~~Fv 177 (314)
T PF11017_consen 105 --PEREDWQMLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARN-----VAFV 177 (314)
T ss_pred --cchhHHHHHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcc-----hhhh
Confidence 01122 233333455555432111 112234789999999999999998888 44568888887654 4688
Q ss_pred HHcCC-cEEeChhhHHHHhhhcCCCCCcEEEECCCchhHHHHH-HhcccCC-EEEEEeccCCCCcccCcccccccCeEEE
Q psy2960 259 KSLGA-DYVFTEEELRNISRDASIPKPKLALNCVGGNSATNLL-RTLVSKG-VMVTYGGMSREPVQIPTSAFIFKDITLR 335 (405)
Q Consensus 259 ~~lg~-~~v~~~~d~~~i~~~t~g~g~Dvvld~~g~~~~~~~~-~~l~~~G-~~v~~g~~~~~~~~~~~~~~~~k~~~~~ 335 (405)
+.+|. |.|+.|+++..+.. ..--+++|..|+..+...+ +.+...= ..+.+|.........+. .+ .+.+-.
T Consensus 178 e~lg~Yd~V~~Yd~i~~l~~----~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~-~l--~g~~~~ 250 (314)
T PF11017_consen 178 ESLGCYDEVLTYDDIDSLDA----PQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKVEAPA-DL--PGPRPE 250 (314)
T ss_pred hccCCceEEeehhhhhhccC----CCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCccccCccc-cC--CCCCcE
Confidence 89996 88999988665321 3446899999998776543 4444432 45666644332211100 00 011111
Q ss_pred EEecchhhhh---hccHHHHHHHHHHHHHHHHcCcccCC-cceeeehhhHHHHHHHHhhhcCC
Q psy2960 336 GHWMTRWQKE---NKESAERKSMMNELTEMMRTGKLAAP-AHKFVTLKNFQEALMNTMSIQGK 394 (405)
Q Consensus 336 g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~~~-~~~~~~~~~~~~A~~~~~~~~~~ 394 (405)
.++....... .-.++...+.+.+..+.+.+...... +..+-+.+.++++++.+. +|+
T Consensus 251 ~FFAp~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~~~wl~~~~~~G~ea~~~~y~~l~--~G~ 311 (314)
T PF11017_consen 251 FFFAPDQIDKRIKEWGAAEFFQRMAAAWKRFAADAQPWLKVEEVAGPEAVEAAYQDLL--AGK 311 (314)
T ss_pred EEeChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhcCcEEEEEecCHHHHHHHHHHHh--cCC
Confidence 1111111110 11123333333333333333333333 567789999999999998 665
No 136
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.07 E-value=0.00022 Score=69.07 Aligned_cols=151 Identities=16% Similarity=0.109 Sum_probs=85.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHH-HHcCCcEEeChhhHHHHhhhcCCCCCcEEEECC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYVFTEEELRNISRDASIPKPKLALNCV 291 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~-~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~ 291 (405)
++.+|+|.|+ |.+|+.+++.++.+|++|+++.++. ++++.+ ..++........+...+.+.. ..+|+||+|+
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~----~~~~~l~~~~g~~v~~~~~~~~~l~~~l--~~aDvVI~a~ 238 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINI----DRLRQLDAEFGGRIHTRYSNAYEIEDAV--KRADLLIGAV 238 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCH----HHHHHHHHhcCceeEeccCCHHHHHHHH--ccCCEEEEcc
Confidence 3456999999 9999999999999999877664332 233433 345553222222222222221 3579999998
Q ss_pred C---c--hh--HHHHHHhcccCCEEEEEeccCCCCccc------CcccccccCeEEEEEe-cchhhhhhccHHHHHHHHH
Q psy2960 292 G---G--NS--ATNLLRTLVSKGVMVTYGGMSREPVQI------PTSAFIFKDITLRGHW-MTRWQKENKESAERKSMMN 357 (405)
Q Consensus 292 g---~--~~--~~~~~~~l~~~G~~v~~g~~~~~~~~~------~~~~~~~k~~~~~g~~-~~~~~~~~~~~~~~~~~~~ 357 (405)
+ . +. ....++.+++++.++.++...+..... +.......++.+.+.. +................++
T Consensus 239 ~~~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~~e~~~~t~~d~p~~~~~Gv~~~~v~nlP~~~p~~aS~~~~~~l~~ 318 (370)
T TIGR00518 239 LIPGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGCVETSRPTTHDQPTYAVHDVVHYCVANMPGAVPKTSTYALTNATMP 318 (370)
T ss_pred ccCCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCCccCCcCCCCCCCEEEECCeEEEEeCCcccccHHHHHHHHHHHHHH
Confidence 3 2 21 356788899999999998654443221 1112333566666652 2222211111122234456
Q ss_pred HHHHHHHcCcccC
Q psy2960 358 ELTEMMRTGKLAA 370 (405)
Q Consensus 358 ~~~~~~~~g~l~~ 370 (405)
.+..+.++|.+.+
T Consensus 319 ~l~~~~~~g~~~~ 331 (370)
T TIGR00518 319 YVLELANHGWRAA 331 (370)
T ss_pred HHHHHHhcccccc
Confidence 6667777775543
No 137
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.01 E-value=0.00011 Score=68.99 Aligned_cols=110 Identities=13% Similarity=0.147 Sum_probs=77.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 292 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g 292 (405)
.|.+|+|.|. |.+|+++++.++.+|++|+++.++. .+.+.+.++|+..+ ...+..+ . -.++|+||+|++
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~----~~~~~~~~~G~~~~-~~~~l~~---~--l~~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKS----AHLARITEMGLSPF-HLSELAE---E--VGKIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCH----HHHHHHHHcCCeee-cHHHHHH---H--hCCCCEEEECCC
Confidence 6899999999 9999999999999999888876543 23566778887643 3333332 2 135899999998
Q ss_pred chhHH-HHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEE
Q psy2960 293 GNSAT-NLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRG 336 (405)
Q Consensus 293 ~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g 336 (405)
..... ..++.+++++.++.++..++. ..+ ...-.++++..+
T Consensus 220 ~~~i~~~~l~~~~~g~vIIDla~~pgg-td~--~~a~~~Gv~~~~ 261 (296)
T PRK08306 220 ALVLTKEVLSKMPPEALIIDLASKPGG-TDF--EYAEKRGIKALL 261 (296)
T ss_pred hhhhhHHHHHcCCCCcEEEEEccCCCC-cCe--eehhhCCeEEEE
Confidence 66543 457889999999999865543 222 223335555554
No 138
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=97.98 E-value=0.0001 Score=71.47 Aligned_cols=101 Identities=17% Similarity=0.207 Sum_probs=72.5
Q ss_pred HHHHHHhhcC-CCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhc
Q psy2960 201 AYRMLKDYNS-LSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDA 279 (405)
Q Consensus 201 a~~al~~~~~-~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t 279 (405)
++.++.+..+ ...|++|+|.|. |.+|..+++.++.+|++|+++-.++ .+...+...|+. +.+.++. +
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp----~r~~~A~~~G~~-v~~leea--l---- 248 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDP----IRALEAAMDGFR-VMTMEEA--A---- 248 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCCh----hhHHHHHhcCCE-eCCHHHH--H----
Confidence 4455544334 368999999999 9999999999999999988864332 234445566763 3332211 2
Q ss_pred CCCCCcEEEECCCchhHH--HHHHhcccCCEEEEEecc
Q psy2960 280 SIPKPKLALNCVGGNSAT--NLLRTLVSKGVMVTYGGM 315 (405)
Q Consensus 280 ~g~g~Dvvld~~g~~~~~--~~~~~l~~~G~~v~~g~~ 315 (405)
.+.|+||+++|..... ..+..+++++.++..|..
T Consensus 249 --~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~ 284 (406)
T TIGR00936 249 --KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHF 284 (406)
T ss_pred --hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence 2469999999987754 368899999999999854
No 139
>PRK08324 short chain dehydrogenase; Validated
Probab=97.94 E-value=5.2e-05 Score=79.65 Aligned_cols=113 Identities=11% Similarity=0.127 Sum_probs=74.7
Q ss_pred CcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEe
Q psy2960 166 GTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIV 245 (405)
Q Consensus 166 G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~ 245 (405)
-++++|..+++..++.+ +.|++++|...... .....+|++|||.||+|++|.++++.+...|++|+.+.
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~ 453 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLAD 453 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEe
Confidence 46788888888888888 88998888632111 12334789999999999999999999999999988887
Q ss_pred cCCcchHHHHHHHHHcCC--c---EEeChhh---HHH-Hhhhc-CCCCCcEEEECCC
Q psy2960 246 RNRDDIDKLKSYLKSLGA--D---YVFTEEE---LRN-ISRDA-SIPKPKLALNCVG 292 (405)
Q Consensus 246 ~~~~~~~~~~~~~~~lg~--~---~v~~~~d---~~~-i~~~t-~g~g~Dvvld~~g 292 (405)
++.+..+ .....++. . ...|-.+ ... +.+.. ..+++|+||++.|
T Consensus 454 r~~~~~~---~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 454 LDEEAAE---AAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred CCHHHHH---HHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 6654322 22223332 1 1123222 222 22211 1347999999998
No 140
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.92 E-value=0.00014 Score=65.70 Aligned_cols=103 Identities=24% Similarity=0.246 Sum_probs=66.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe--Ch---hhHHH-Hhhhc-CCCCCc
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF--TE---EELRN-ISRDA-SIPKPK 285 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~--~~---~d~~~-i~~~t-~g~g~D 285 (405)
+|++|+|+|++|++|..+++.+...|++|+.++++.+..++..+.....+.-+.+ |- ++... +.+.. ...++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4789999999999999999999999999999988765433322333333322222 22 22222 22211 124689
Q ss_pred EEEECCCchh------------------------HHHHHHhcccCCEEEEEecc
Q psy2960 286 LALNCVGGNS------------------------ATNLLRTLVSKGVMVTYGGM 315 (405)
Q Consensus 286 vvld~~g~~~------------------------~~~~~~~l~~~G~~v~~g~~ 315 (405)
.++.+.|... .+..+.+++++|+++.++..
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 137 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM 137 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 9999887421 22334566778999998854
No 141
>PLN02494 adenosylhomocysteinase
Probab=97.85 E-value=0.00014 Score=71.23 Aligned_cols=100 Identities=13% Similarity=0.189 Sum_probs=72.4
Q ss_pred HHHHHhhcCC-CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcC
Q psy2960 202 YRMLKDYNSL-SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDAS 280 (405)
Q Consensus 202 ~~al~~~~~~-~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~ 280 (405)
+.++.+..++ -.|++|+|.|. |.+|..+++.++.+|++|+++-.+. .+...+...|+..+ + .+++.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp----~r~~eA~~~G~~vv-~---leEal---- 307 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDP----ICALQALMEGYQVL-T---LEDVV---- 307 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCc----hhhHHHHhcCCeec-c---HHHHH----
Confidence 4455444343 67999999999 9999999999999999987764332 22344556676532 2 22211
Q ss_pred CCCCcEEEECCCchhH--HHHHHhcccCCEEEEEecc
Q psy2960 281 IPKPKLALNCVGGNSA--TNLLRTLVSKGVMVTYGGM 315 (405)
Q Consensus 281 g~g~Dvvld~~g~~~~--~~~~~~l~~~G~~v~~g~~ 315 (405)
...|++++|.|.... ...++.|++++.++.+|..
T Consensus 308 -~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 308 -SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred -hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence 246999999998754 4679999999999999964
No 142
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.78 E-value=0.00014 Score=68.81 Aligned_cols=109 Identities=16% Similarity=0.198 Sum_probs=76.6
Q ss_pred cceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCC---CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHH
Q psy2960 177 DVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSL---SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDK 253 (405)
Q Consensus 177 ~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~---~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~ 253 (405)
..++++|+.+..+.++... +...+++++...... -+|.+|+|.|+ |.+|..+++.++..|+..+.+++... ++
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~--~r 214 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTY--ER 214 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCH--HH
Confidence 4578889999988887765 455566666432221 37999999999 99999999999998876666553321 22
Q ss_pred HHHHHHHcCCcEEeChhhHHH-HhhhcCCCCCcEEEECCCchhH
Q psy2960 254 LKSYLKSLGADYVFTEEELRN-ISRDASIPKPKLALNCVGGNSA 296 (405)
Q Consensus 254 ~~~~~~~lg~~~v~~~~d~~~-i~~~t~g~g~Dvvld~~g~~~~ 296 (405)
..+.+.++|++ +.+.++..+ +. ..|+||.|++.+..
T Consensus 215 a~~la~~~g~~-~~~~~~~~~~l~------~aDvVi~at~~~~~ 251 (311)
T cd05213 215 AEELAKELGGN-AVPLDELLELLN------EADVVISATGAPHY 251 (311)
T ss_pred HHHHHHHcCCe-EEeHHHHHHHHh------cCCEEEECCCCCch
Confidence 34677788874 444444443 32 46999999998766
No 143
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.75 E-value=0.00072 Score=61.92 Aligned_cols=140 Identities=16% Similarity=0.297 Sum_probs=84.6
Q ss_pred CCCCCEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHH
Q psy2960 152 LAVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVI 231 (405)
Q Consensus 152 ~~~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~ai 231 (405)
+++||+++..+ +|.+|.. +...++.++++++|..+. .+.... ....+.. .+.+|++||-.|+ |. |..++
T Consensus 67 ~~~g~~~~i~p----~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~~--~~~~~~~VLDiGc-Gs-G~l~i 135 (250)
T PRK00517 67 IRIGDRLWIVP----SWEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALEK--LVLPGKTVLDVGC-GS-GILAI 135 (250)
T ss_pred EEEcCCEEEEC----CCcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHHh--hcCCCCEEEEeCC-cH-HHHHH
Confidence 56699888774 5777755 778899999999988764 221211 2333332 3568999999999 44 88777
Q ss_pred HHHHHcCCc-EEEEecCCcchHHHHHHHHHcCC-cEEeChhhHHHHhhhcCCC-CCcEEEECCCchhH----HHHHHhcc
Q psy2960 232 QIARHWGLK-TINIVRNRDDIDKLKSYLKSLGA-DYVFTEEELRNISRDASIP-KPKLALNCVGGNSA----TNLLRTLV 304 (405)
Q Consensus 232 qla~~~G~~-v~~~~~~~~~~~~~~~~~~~lg~-~~v~~~~d~~~i~~~t~g~-g~Dvvld~~g~~~~----~~~~~~l~ 304 (405)
.+++ .|+. ++++-.++...+...+.+...+. +.+. +. .+. .+|+|+.....+.. ....+.|+
T Consensus 136 ~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~-------~~---~~~~~fD~Vvani~~~~~~~l~~~~~~~Lk 204 (250)
T PRK00517 136 AAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVY-------LP---QGDLKADVIVANILANPLLELAPDLARLLK 204 (250)
T ss_pred HHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEE-------Ec---cCCCCcCEEEEcCcHHHHHHHHHHHHHhcC
Confidence 6554 6776 55553332222222222222232 1110 10 111 58999976654433 34678899
Q ss_pred cCCEEEEEe
Q psy2960 305 SKGVMVTYG 313 (405)
Q Consensus 305 ~~G~~v~~g 313 (405)
++|+++..|
T Consensus 205 pgG~lilsg 213 (250)
T PRK00517 205 PGGRLILSG 213 (250)
T ss_pred CCcEEEEEE
Confidence 999999876
No 144
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.75 E-value=5.8e-05 Score=77.54 Aligned_cols=123 Identities=12% Similarity=0.070 Sum_probs=77.6
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC-----------------cchHHHHHHHHHcCCcEEeChhh-
Q psy2960 210 SLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR-----------------DDIDKLKSYLKSLGADYVFTEEE- 271 (405)
Q Consensus 210 ~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~-----------------~~~~~~~~~~~~lg~~~v~~~~d- 271 (405)
..++|++|+|.|+ |+.|+++++.++..|++|+++-..+ +..+.+++.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 4678999999999 9999999999999999977764221 12355678888999987776432
Q ss_pred HHH-HhhhcCCCCCcEEEECCCchhHH-HHHHhcccCCEEEEEeccCCCCcccCcccccccCeEEEEE
Q psy2960 272 LRN-ISRDASIPKPKLALNCVGGNSAT-NLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGH 337 (405)
Q Consensus 272 ~~~-i~~~t~g~g~Dvvld~~g~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~k~~~~~g~ 337 (405)
... .... ..++|+||+++|..... ..+.....+|.+..++..... .... .....+++.+.|.
T Consensus 212 ~~~~~~~~--~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~~l~~~-~~~~-~~~~gk~v~ViGg 275 (564)
T PRK12771 212 EDITLEQL--EGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVDFLRAV-GEGE-PPFLGKRVVVIGG 275 (564)
T ss_pred CcCCHHHH--HhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHHHHHHHh-hccC-CcCCCCCEEEECC
Confidence 110 1111 23689999999976432 234445556665554422110 0111 2234577777773
No 145
>PRK12742 oxidoreductase; Provisional
Probab=97.73 E-value=0.0005 Score=62.10 Aligned_cols=102 Identities=13% Similarity=0.138 Sum_probs=64.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eChhhHHHHhhh-cCCCCCcEEEEC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEELRNISRD-ASIPKPKLALNC 290 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d~~~i~~~-t~g~g~Dvvld~ 290 (405)
.|++|||+|++|++|.++++.+...|++++.+.++.+. ...+...+++...+ .|..+.+.+.+. ....++|++|++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~--~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ 82 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKD--AAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVN 82 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHH--HHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEEC
Confidence 47899999999999999999999999998877643221 11233345565433 343333221111 112468999999
Q ss_pred CCchh--------------------------HHHHHHhcccCCEEEEEeccC
Q psy2960 291 VGGNS--------------------------ATNLLRTLVSKGVMVTYGGMS 316 (405)
Q Consensus 291 ~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~~ 316 (405)
.|... ....+..++++|+++.++...
T Consensus 83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 134 (237)
T PRK12742 83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN 134 (237)
T ss_pred CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence 87421 012234456789999988643
No 146
>KOG1205|consensus
Probab=97.69 E-value=0.00048 Score=63.26 Aligned_cols=105 Identities=20% Similarity=0.344 Sum_probs=72.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-Ee----C---hhhHHH-Hhhh-cCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF----T---EEELRN-ISRD-ASIP 282 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v~----~---~~d~~~-i~~~-t~g~ 282 (405)
.|+.|+|.|||+|+|.+++.-.-..|++++.+++..+..+...+.+++.+... ++ | .++... +... ...+
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 58999999999999999999889999999999988766555547777777654 32 2 222222 2111 1257
Q ss_pred CCcEEEECCCch--------------------------hHHHHHHhcccC--CEEEEEeccCC
Q psy2960 283 KPKLALNCVGGN--------------------------SATNLLRTLVSK--GVMVTYGGMSR 317 (405)
Q Consensus 283 g~Dvvld~~g~~--------------------------~~~~~~~~l~~~--G~~v~~g~~~~ 317 (405)
++|+.+|..|-. .+..++..|++. |+|+.+++..+
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG 153 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG 153 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc
Confidence 899999988732 123445555443 99999986543
No 147
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.61 E-value=0.00044 Score=60.32 Aligned_cols=118 Identities=20% Similarity=0.226 Sum_probs=79.8
Q ss_pred hhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe-C
Q psy2960 190 EISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-T 268 (405)
Q Consensus 190 ~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~-~ 268 (405)
..-++.-+...|. +.+...+++|++||=+|+ |.|..++-+|+..| +|+.+-+.++-.+...+.++.+|.+.|. .
T Consensus 51 ~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGt--GsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~ 125 (209)
T COG2518 51 CGQTISAPHMVAR--MLQLLELKPGDRVLEIGT--GSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVR 125 (209)
T ss_pred CCceecCcHHHHH--HHHHhCCCCCCeEEEECC--CchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEE
Confidence 3344443444333 235578999999999998 67999999999999 7777754443334444556778885543 2
Q ss_pred hhhHHHHhhhcCCCCCcEEEECCCchhHHH-HHHhcccCCEEEEEec
Q psy2960 269 EEELRNISRDASIPKPKLALNCVGGNSATN-LLRTLVSKGVMVTYGG 314 (405)
Q Consensus 269 ~~d~~~i~~~t~g~g~Dvvld~~g~~~~~~-~~~~l~~~G~~v~~g~ 314 (405)
..|-. ..+.....+|.|+-+.+.+.... .++.|++||+++..-+
T Consensus 126 ~gDG~--~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 126 HGDGS--KGWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred ECCcc--cCCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 33321 11222467999998888877754 5799999999988764
No 148
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.59 E-value=0.00067 Score=68.41 Aligned_cols=111 Identities=15% Similarity=0.248 Sum_probs=69.4
Q ss_pred HHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHH-----cCC------cEE-eChhh
Q psy2960 204 MLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-----LGA------DYV-FTEEE 271 (405)
Q Consensus 204 al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~-----lg~------~~v-~~~~d 271 (405)
+.-...+.+.|++|||.||+|++|..+++.+...|++|++++++.++.....+.+.+ .|. ..+ .|-.+
T Consensus 70 ~~~~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD 149 (576)
T PLN03209 70 AIPKELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK 149 (576)
T ss_pred ccccccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC
Confidence 333345677999999999999999999999999999999998775543322222222 121 111 23333
Q ss_pred HHHHhhhcCCCCCcEEEECCCchh----------------HHHHHHhccc--CCEEEEEeccC
Q psy2960 272 LRNISRDASIPKPKLALNCVGGNS----------------ATNLLRTLVS--KGVMVTYGGMS 316 (405)
Q Consensus 272 ~~~i~~~t~g~g~Dvvld~~g~~~----------------~~~~~~~l~~--~G~~v~~g~~~ 316 (405)
.+.+.+.. .++|+||+|+|... ....++.+.. .|+||.++...
T Consensus 150 ~esI~~aL--ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 150 PDQIGPAL--GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred HHHHHHHh--cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 33343332 46899999987521 1123344333 36999988643
No 149
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.00094 Score=61.59 Aligned_cols=81 Identities=21% Similarity=0.360 Sum_probs=52.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHc-CCcE-E--eCh---hhHHH-HhhhcCCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL-GADY-V--FTE---EELRN-ISRDASIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~l-g~~~-v--~~~---~d~~~-i~~~t~g~g~ 284 (405)
.|+++||.|+++++|.+.++.+...|++|+.+.++.+..++..+.+++. +.+. + .|- ++... +.+....+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 5789999999999999999999999999998876654433333333222 3221 1 232 22333 3333223568
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++++.|.
T Consensus 87 D~lv~nag~ 95 (263)
T PRK08339 87 DIFFFSTGG 95 (263)
T ss_pred cEEEECCCC
Confidence 999999874
No 150
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.0029 Score=57.98 Aligned_cols=81 Identities=19% Similarity=0.253 Sum_probs=52.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHHcCCcEE---eChhh---HHH-Hhhhc-CCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYV---FTEEE---LRN-ISRDA-SIPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~~d---~~~-i~~~t-~g~g 283 (405)
.+.+|+|.|++|++|...++.+...|++ |+.+.++.++.+...+.+++.+.... .|-.+ ..+ +.... .-++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999999 77776654443333334445554322 23222 222 21110 1136
Q ss_pred CcEEEECCCc
Q psy2960 284 PKLALNCVGG 293 (405)
Q Consensus 284 ~Dvvld~~g~ 293 (405)
+|++|++.|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 8999999974
No 151
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.00097 Score=60.64 Aligned_cols=81 Identities=14% Similarity=0.101 Sum_probs=53.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eChhh---HHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTEEE---LRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~~d---~~~-i~~~t-~g~g~ 284 (405)
++.+++|+|++|++|...+..+...|++++.+.++.++.+...+.++..+.... .|-.+ ... +.+.. ...++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999999999999999887665544444444444443321 13222 222 21111 12479
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999985
No 152
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.0012 Score=63.19 Aligned_cols=81 Identities=15% Similarity=0.250 Sum_probs=55.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eChhh---HHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTEEE---LRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~~d---~~~-i~~~t-~g~g~ 284 (405)
.+.+|+|.||+|++|.++++.+...|++|+.+.++.+..++..+.+++.|.+.. .|..| ... +.+.. .-+++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 568999999999999999999999999999988776554444455556665432 23222 222 22111 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|++|++.|.
T Consensus 87 D~lInnAg~ 95 (334)
T PRK07109 87 DTWVNNAMV 95 (334)
T ss_pred CEEEECCCc
Confidence 999999984
No 153
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.00047 Score=65.86 Aligned_cols=80 Identities=21% Similarity=0.332 Sum_probs=56.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe---Chh---hHHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---TEE---ELRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~---~~~---d~~~-i~~~t-~g~g~ 284 (405)
.+++|||+|++|++|.+.++.+...|++|+.+.++.+..++..+.+++.|.+..+ |-. +... +.+.. ..+++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999999999999999887765544445556666765322 322 2222 22111 13569
Q ss_pred cEEEECCC
Q psy2960 285 KLALNCVG 292 (405)
Q Consensus 285 Dvvld~~g 292 (405)
|++|++.|
T Consensus 86 D~lVnnAG 93 (330)
T PRK06139 86 DVWVNNVG 93 (330)
T ss_pred CEEEECCC
Confidence 99999998
No 154
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.51 E-value=0.00073 Score=58.45 Aligned_cols=92 Identities=14% Similarity=0.239 Sum_probs=64.1
Q ss_pred EEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe-ChhhHHHHhhhcCCCCCcEEEECCCc--
Q psy2960 217 VIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRNISRDASIPKPKLALNCVGG-- 293 (405)
Q Consensus 217 VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~-~~~d~~~i~~~t~g~g~Dvvld~~g~-- 293 (405)
|+|.||+|.+|...++.+...|.+|++++++.++.+. ..+.+.+. |..|.+.+.+.. .++|+|+.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~------~~~~~~~~~d~~d~~~~~~al--~~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED------SPGVEIIQGDLFDPDSVKAAL--KGADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH------CTTEEEEESCTTCHHHHHHHH--TTSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc------ccccccceeeehhhhhhhhhh--hhcchhhhhhhhhc
Confidence 7999999999999999999999999999988765322 44455442 444444344432 379999999983
Q ss_pred ---hhHHHHHHhcccCC--EEEEEeccC
Q psy2960 294 ---NSATNLLRTLVSKG--VMVTYGGMS 316 (405)
Q Consensus 294 ---~~~~~~~~~l~~~G--~~v~~g~~~ 316 (405)
......++.++..| +++.++...
T Consensus 73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccccccceeeeccc
Confidence 22334455555444 888887543
No 155
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.46 E-value=0.0017 Score=60.56 Aligned_cols=93 Identities=15% Similarity=0.226 Sum_probs=66.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 292 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g 292 (405)
.|++|+|.|. |.+|.+++..++.+|++|++..++.+ +.+.+.+.|... +...+..+ . -.+.|+|++|++
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~----~~~~~~~~g~~~-~~~~~l~~---~--l~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSA----DLARITEMGLIP-FPLNKLEE---K--VAEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHCCCee-ecHHHHHH---H--hccCCEEEECCC
Confidence 5899999999 99999999999999998887765532 244455666543 33333333 1 135799999997
Q ss_pred chhHH-HHHHhcccCCEEEEEeccC
Q psy2960 293 GNSAT-NLLRTLVSKGVMVTYGGMS 316 (405)
Q Consensus 293 ~~~~~-~~~~~l~~~G~~v~~g~~~ 316 (405)
..... ..++.++++..++.++..+
T Consensus 219 ~~ii~~~~l~~~k~~aliIDlas~P 243 (287)
T TIGR02853 219 ALVLTADVLSKLPKHAVIIDLASKP 243 (287)
T ss_pred hHHhCHHHHhcCCCCeEEEEeCcCC
Confidence 65543 4578889988888888544
No 156
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.46 E-value=0.0013 Score=64.80 Aligned_cols=91 Identities=14% Similarity=0.241 Sum_probs=66.2
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEEC
Q psy2960 211 LSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNC 290 (405)
Q Consensus 211 ~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~ 290 (405)
.-.|++|+|.|. |.+|..+++.++.+|++|+++-.++. +...+...|+.. .+ ++++. ...|+|+.+
T Consensus 251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~----~a~~A~~~G~~~-~~---leell-----~~ADIVI~a 316 (476)
T PTZ00075 251 MIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPI----CALQAAMEGYQV-VT---LEDVV-----ETADIFVTA 316 (476)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCch----hHHHHHhcCcee-cc---HHHHH-----hcCCEEEEC
Confidence 347999999999 89999999999999999877643322 222333456543 22 22321 257999999
Q ss_pred CCchhHH--HHHHhcccCCEEEEEecc
Q psy2960 291 VGGNSAT--NLLRTLVSKGVMVTYGGM 315 (405)
Q Consensus 291 ~g~~~~~--~~~~~l~~~G~~v~~g~~ 315 (405)
+|...+. ..+..|++++.++.+|..
T Consensus 317 tGt~~iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 317 TGNKDIITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred CCcccccCHHHHhccCCCcEEEEcCCC
Confidence 9976653 578999999999999865
No 157
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.42 E-value=0.00075 Score=60.04 Aligned_cols=78 Identities=19% Similarity=0.295 Sum_probs=55.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCC----cEEeChh---hHHH-HhhhcC-CCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA----DYVFTEE---ELRN-ISRDAS-IPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~----~~v~~~~---d~~~-i~~~t~-g~g 283 (405)
.++.++|.||++|+|.++++.....|++++.+.++.+. +.+++.+++. -..+|-. +.+. +..+.. -+.
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~dr---L~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREER---LEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHH---HHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCc
Confidence 45889999999999999999999999999999977654 3445556763 1223333 3333 433322 345
Q ss_pred CcEEEECCCc
Q psy2960 284 PKLALNCVGG 293 (405)
Q Consensus 284 ~Dvvld~~g~ 293 (405)
+|+++|..|-
T Consensus 82 iDiLvNNAGl 91 (246)
T COG4221 82 IDILVNNAGL 91 (246)
T ss_pred ccEEEecCCC
Confidence 9999999883
No 158
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.39 E-value=0.00065 Score=61.90 Aligned_cols=81 Identities=20% Similarity=0.329 Sum_probs=56.3
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHH-cCCcE-Ee--Chhh---HHHHhhh--cCCC
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADY-VF--TEEE---LRNISRD--ASIP 282 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~-lg~~~-v~--~~~d---~~~i~~~--t~g~ 282 (405)
..+.++||+|||+|+|...+..+...|.+++.++|+.++.++..+.+.. .|... ++ |..+ ...+.+. ..+.
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 4678999999999999999999999999999999887765444443332 22221 22 3222 3333322 2245
Q ss_pred CCcEEEECCC
Q psy2960 283 KPKLALNCVG 292 (405)
Q Consensus 283 g~Dvvld~~g 292 (405)
.+|+.+|+.|
T Consensus 84 ~IdvLVNNAG 93 (265)
T COG0300 84 PIDVLVNNAG 93 (265)
T ss_pred cccEEEECCC
Confidence 8999999998
No 159
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.0027 Score=57.22 Aligned_cols=81 Identities=14% Similarity=0.124 Sum_probs=53.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eCh---hhHHH-Hhhhc-CCCCCcE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTE---EELRN-ISRDA-SIPKPKL 286 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~---~d~~~-i~~~t-~g~g~Dv 286 (405)
+|.++||+|++|++|..+++.+...|++|+.+.++.++..+..+.....+...+ .|. ++... +.+.. ...++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 478999999999999999999988899999998765544343444444444332 232 22222 22211 1247899
Q ss_pred EEECCCc
Q psy2960 287 ALNCVGG 293 (405)
Q Consensus 287 vld~~g~ 293 (405)
|+.+.|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9998873
No 160
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.0034 Score=57.10 Aligned_cols=102 Identities=13% Similarity=0.174 Sum_probs=62.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHHcCCcE-E--eChhh---HHH-HhhhcC-CCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-IDKLKSYLKSLGADY-V--FTEEE---LRN-ISRDAS-IPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~-~~~~~~~~~~lg~~~-v--~~~~d---~~~-i~~~t~-g~g 283 (405)
.|.++||.|++|++|...+..+...|++|+++.++.+. .+...+.++..+... . .|..+ ... +.+... ..+
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999998999999888765432 112222233334321 1 23222 222 222211 246
Q ss_pred CcEEEECCCch--------------------hHHHHHHhcccCCEEEEEec
Q psy2960 284 PKLALNCVGGN--------------------SATNLLRTLVSKGVMVTYGG 314 (405)
Q Consensus 284 ~Dvvld~~g~~--------------------~~~~~~~~l~~~G~~v~~g~ 314 (405)
+|+++.+.|.. .+..+...+.++|+++.++.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 89999887642 11223444556789998875
No 161
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0023 Score=59.46 Aligned_cols=76 Identities=14% Similarity=0.177 Sum_probs=51.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eChhh---HHH-Hhhhc--CCCCCc
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEE---LRN-ISRDA--SIPKPK 285 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d---~~~-i~~~t--~g~g~D 285 (405)
.+++|+|.||+|++|.+.++.+...|++|+++.++.+. ++.+.+.+.+.+ .|..| ... +.+.. .++.+|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~----~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id 78 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEED----VAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLD 78 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence 46799999999999999999998899999999866443 334444455433 24332 222 22211 134799
Q ss_pred EEEECCC
Q psy2960 286 LALNCVG 292 (405)
Q Consensus 286 vvld~~g 292 (405)
+++++.|
T Consensus 79 ~li~~Ag 85 (277)
T PRK05993 79 ALFNNGA 85 (277)
T ss_pred EEEECCC
Confidence 9999986
No 162
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.0016 Score=59.65 Aligned_cols=84 Identities=15% Similarity=0.122 Sum_probs=55.1
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHc-CCcEEEEecCCcc-hHHHHHHHHHcCCc--EE--eChh---hHHH-Hhhhc
Q psy2960 210 SLSPGDVVIQNGANSACGQNVIQIARHW-GLKTINIVRNRDD-IDKLKSYLKSLGAD--YV--FTEE---ELRN-ISRDA 279 (405)
Q Consensus 210 ~~~~g~~VLI~ga~G~vG~~aiqla~~~-G~~v~~~~~~~~~-~~~~~~~~~~lg~~--~v--~~~~---d~~~-i~~~t 279 (405)
.+..+.+|||.||+|++|.+.++-+... |++|+.+.++.+. .++..+.++..+.. ++ .|.. +... +.+..
T Consensus 4 ~~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 4 AVGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred ccCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 3567889999999999999999877666 5899999877654 44444445555531 12 2322 2233 33333
Q ss_pred CCCCCcEEEECCCc
Q psy2960 280 SIPKPKLALNCVGG 293 (405)
Q Consensus 280 ~g~g~Dvvld~~g~ 293 (405)
..+++|+++++.|.
T Consensus 84 ~~g~id~li~~ag~ 97 (253)
T PRK07904 84 AGGDVDVAIVAFGL 97 (253)
T ss_pred hcCCCCEEEEeeec
Confidence 23579999988764
No 163
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0036 Score=57.73 Aligned_cols=80 Identities=14% Similarity=0.185 Sum_probs=52.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eChhh---HHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTEEE---LRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~~d---~~~-i~~~t-~g~g~ 284 (405)
++.++||.|++|++|...++.+...|++|+.+.++.+..+...+.+.+.+.... .|..+ ... +.+.. ...++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 688999999999999999999999999999988765443332233333343221 23222 222 22221 12468
Q ss_pred cEEEECCC
Q psy2960 285 KLALNCVG 292 (405)
Q Consensus 285 Dvvld~~g 292 (405)
|++|++.|
T Consensus 88 D~vi~~ag 95 (264)
T PRK07576 88 DVLVSGAA 95 (264)
T ss_pred CEEEECCC
Confidence 99999886
No 164
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.32 E-value=0.0016 Score=59.63 Aligned_cols=81 Identities=14% Similarity=0.167 Sum_probs=55.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe---Chhh---HHH-Hhhh-cCCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---TEEE---LRN-ISRD-ASIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~---~~~d---~~~-i~~~-t~g~g~ 284 (405)
.|.++||.|++|++|..+++.+...|++|+.+.++.+..++..+.+++.+.+..+ |-.+ ... +.+. ..-+++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999999998887765544555555566654322 3222 222 2211 112468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++.|.|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999999874
No 165
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.24 E-value=0.0047 Score=56.12 Aligned_cols=80 Identities=16% Similarity=0.281 Sum_probs=51.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-E--eCh---hhHHH-Hhhh-cCCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-V--FTE---EELRN-ISRD-ASIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v--~~~---~d~~~-i~~~-t~g~g~ 284 (405)
.+.++||.|++|++|...++.+...|++|+++.++.++.+.....+.. +.+. + .|- +++.. +.+. .....+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 467999999999999999999999999999998776543333333222 2211 1 122 22222 2221 113468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+||.+.|.
T Consensus 83 d~vi~~ag~ 91 (251)
T PRK07231 83 DILVNNAGT 91 (251)
T ss_pred CEEEECCCC
Confidence 999999874
No 166
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.23 E-value=0.0016 Score=60.20 Aligned_cols=104 Identities=20% Similarity=0.275 Sum_probs=65.1
Q ss_pred HHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCc--EEeChhhHHHHhhhc
Q psy2960 202 YRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD--YVFTEEELRNISRDA 279 (405)
Q Consensus 202 ~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~--~v~~~~d~~~i~~~t 279 (405)
+..+.+.+++++|++||-.|+ |-|-.++.+|+..|++|++++-|.+..+...+.+++.|.. .-+...|+. +.
T Consensus 51 ~~~~~~~~~l~~G~~vLDiGc--GwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~---~~- 124 (273)
T PF02353_consen 51 LDLLCEKLGLKPGDRVLDIGC--GWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYR---DL- 124 (273)
T ss_dssp HHHHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GG---G--
T ss_pred HHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeecc---cc-
Confidence 444557789999999999998 4789999999999999999998877766666777777742 122222222 12
Q ss_pred CCCCCcEEEE-----CCCchh----HHHHHHhcccCCEEEEE
Q psy2960 280 SIPKPKLALN-----CVGGNS----ATNLLRTLVSKGVMVTY 312 (405)
Q Consensus 280 ~g~g~Dvvld-----~~g~~~----~~~~~~~l~~~G~~v~~ 312 (405)
...+|.|+. .+|.+. +...-+.|+|+|+++.-
T Consensus 125 -~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 125 -PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp ---S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred -CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 127888775 444332 33456899999998754
No 167
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.23 E-value=0.0018 Score=53.28 Aligned_cols=92 Identities=14% Similarity=0.230 Sum_probs=55.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHHcCCc--EEeChhhHHHHhhhcCCCCCcEEEE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGAD--YVFTEEELRNISRDASIPKPKLALN 289 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~~~~lg~~--~v~~~~d~~~i~~~t~g~g~Dvvld 289 (405)
.+.+|+|.|+ |++|.+++..+...|++ ++++.|+.++ ..+++..++.. .+...++..... ..+|+||+
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~r---a~~l~~~~~~~~~~~~~~~~~~~~~-----~~~DivI~ 81 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPER---AEALAEEFGGVNIEAIPLEDLEEAL-----QEADIVIN 81 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHH---HHHHHHHHTGCSEEEEEGGGHCHHH-----HTESEEEE
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHH---HHHHHHHcCccccceeeHHHHHHHH-----hhCCeEEE
Confidence 6899999999 99999999999999998 4455444333 23444445332 244455543311 24799999
Q ss_pred CCCchhH---HHHHHhccc-CCEEEEEe
Q psy2960 290 CVGGNSA---TNLLRTLVS-KGVMVTYG 313 (405)
Q Consensus 290 ~~g~~~~---~~~~~~l~~-~G~~v~~g 313 (405)
|++.... ...+....+ -+.++.++
T Consensus 82 aT~~~~~~i~~~~~~~~~~~~~~v~Dla 109 (135)
T PF01488_consen 82 ATPSGMPIITEEMLKKASKKLRLVIDLA 109 (135)
T ss_dssp -SSTTSTSSTHHHHTTTCHHCSEEEES-
T ss_pred ecCCCCcccCHHHHHHHHhhhhceeccc
Confidence 9986533 222332222 25677765
No 168
>PRK06182 short chain dehydrogenase; Validated
Probab=97.23 E-value=0.0039 Score=57.72 Aligned_cols=77 Identities=19% Similarity=0.233 Sum_probs=51.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eCh---hhHHH-Hhhh-cCCCCCcE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTE---EELRN-ISRD-ASIPKPKL 286 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~---~d~~~-i~~~-t~g~g~Dv 286 (405)
.+.+++|.|++|++|.+.++.+...|++|+++.++.++ ++.+...+...+ .|- ++... +.+. ....++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~----l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~ 77 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDK----MEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV 77 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 46799999999999999999998999999998866433 333333344332 232 22333 3222 12357999
Q ss_pred EEECCCc
Q psy2960 287 ALNCVGG 293 (405)
Q Consensus 287 vld~~g~ 293 (405)
++++.|.
T Consensus 78 li~~ag~ 84 (273)
T PRK06182 78 LVNNAGY 84 (273)
T ss_pred EEECCCc
Confidence 9999973
No 169
>PRK06128 oxidoreductase; Provisional
Probab=97.20 E-value=0.0056 Score=57.62 Aligned_cols=103 Identities=14% Similarity=0.182 Sum_probs=64.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcc--hHHHHHHHHHcCCcEEe---Chh---hHHH-Hhhhc-CCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD--IDKLKSYLKSLGADYVF---TEE---ELRN-ISRDA-SIP 282 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~--~~~~~~~~~~lg~~~v~---~~~---d~~~-i~~~t-~g~ 282 (405)
.|.++||.|++|++|.+.+..+...|++|+.+..+.+. .++..+.++..|....+ |-. +..+ +.+.. ..+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 57899999999999999999999999999877654332 12233444455543222 322 2222 22211 124
Q ss_pred CCcEEEECCCch---------------------------hHHHHHHhcccCCEEEEEecc
Q psy2960 283 KPKLALNCVGGN---------------------------SATNLLRTLVSKGVMVTYGGM 315 (405)
Q Consensus 283 g~Dvvld~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~ 315 (405)
++|++|++.|.. .+..++..+.++|+++.++..
T Consensus 134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~ 193 (300)
T PRK06128 134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSI 193 (300)
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCc
Confidence 699999998731 011233455678899988754
No 170
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0038 Score=57.81 Aligned_cols=74 Identities=19% Similarity=0.243 Sum_probs=50.2
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eChhh---HHH-Hhhhc-CCCCCcEEE
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEE---LRN-ISRDA-SIPKPKLAL 288 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d---~~~-i~~~t-~g~g~Dvvl 288 (405)
+++||.||+|++|.+.++.+...|++|+++.++.+. .+.+.+.+...+ .|..+ ... +.... ...++|+++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi 77 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAED----VEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLI 77 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 479999999999999999999999999998865432 333344454433 34322 333 22221 135699999
Q ss_pred ECCC
Q psy2960 289 NCVG 292 (405)
Q Consensus 289 d~~g 292 (405)
++.|
T Consensus 78 ~~ag 81 (274)
T PRK05693 78 NNAG 81 (274)
T ss_pred ECCC
Confidence 9998
No 171
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.20 E-value=0.0016 Score=59.65 Aligned_cols=115 Identities=16% Similarity=0.250 Sum_probs=82.4
Q ss_pred CCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCc
Q psy2960 185 DIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD 264 (405)
Q Consensus 185 ~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~ 264 (405)
++++++|- ..++..+.+..+++||++||=+|+ |=|.+++..|+..|++|++++-|.+..+...+.+++.|..
T Consensus 50 ~~tL~eAQ------~~k~~~~~~kl~L~~G~~lLDiGC--GWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~ 121 (283)
T COG2230 50 DMTLEEAQ------RAKLDLILEKLGLKPGMTLLDIGC--GWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLE 121 (283)
T ss_pred CCChHHHH------HHHHHHHHHhcCCCCCCEEEEeCC--ChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCC
Confidence 34566653 236666677799999999999999 4589999999999999999998887777667777888875
Q ss_pred -EE-e---ChhhHHHHhhhcCCCCCcEEEE-----CCCch----hHHHHHHhcccCCEEEEEecc
Q psy2960 265 -YV-F---TEEELRNISRDASIPKPKLALN-----CVGGN----SATNLLRTLVSKGVMVTYGGM 315 (405)
Q Consensus 265 -~v-~---~~~d~~~i~~~t~g~g~Dvvld-----~~g~~----~~~~~~~~l~~~G~~v~~g~~ 315 (405)
++ + |++++.+ .||-|+. .+|.+ .+..+-++|+++|+++.-...
T Consensus 122 ~~v~v~l~d~rd~~e--------~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~ 178 (283)
T COG2230 122 DNVEVRLQDYRDFEE--------PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT 178 (283)
T ss_pred cccEEEecccccccc--------ccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence 22 1 3344322 2676653 44542 234567899999999887643
No 172
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.004 Score=57.60 Aligned_cols=78 Identities=14% Similarity=0.133 Sum_probs=50.6
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE----eChhh---HHH-Hhhhc-CCCCCcE
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV----FTEEE---LRN-ISRDA-SIPKPKL 286 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v----~~~~d---~~~-i~~~t-~g~g~Dv 286 (405)
+++|.||+|++|.++++.+...|++|+.+.++.+..+...+.++..+...+ .|-.+ ... +.+.. ...++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 699999999999999999999999988887665443333344444454321 23222 222 22211 1346899
Q ss_pred EEECCCc
Q psy2960 287 ALNCVGG 293 (405)
Q Consensus 287 vld~~g~ 293 (405)
++++.|.
T Consensus 82 lv~~ag~ 88 (272)
T PRK07832 82 VMNIAGI 88 (272)
T ss_pred EEECCCC
Confidence 9999974
No 173
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.18 E-value=0.0059 Score=56.06 Aligned_cols=81 Identities=14% Similarity=0.108 Sum_probs=50.3
Q ss_pred CCCEEEEeCCC--cHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe--C---hhhHHH-HhhhcC-CCC
Q psy2960 213 PGDVVIQNGAN--SACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF--T---EEELRN-ISRDAS-IPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~--G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~--~---~~d~~~-i~~~t~-g~g 283 (405)
.|+++||.|++ +|+|.++++.+...|++|+.+.++.+..+...+...+++...++ | .++... +.+... .+.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 57899999997 49999999999999999988876533212222333444432332 3 222322 222211 246
Q ss_pred CcEEEECCCc
Q psy2960 284 PKLALNCVGG 293 (405)
Q Consensus 284 ~Dvvld~~g~ 293 (405)
+|+++++.|.
T Consensus 89 ld~lv~nAg~ 98 (258)
T PRK07533 89 LDFLLHSIAF 98 (258)
T ss_pred CCEEEEcCcc
Confidence 8999999873
No 174
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.0022 Score=60.26 Aligned_cols=81 Identities=17% Similarity=0.312 Sum_probs=53.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eCh---hhHHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTE---EELRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~---~d~~~-i~~~t-~g~g~ 284 (405)
.+.+++|.||+|++|.+.++.+...|++|+++.++.+..++..+...+.+.+.. .|- ++... +.... ..+++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999988999999998775544443444444444321 232 22222 22111 12478
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|++++|.|.
T Consensus 119 d~li~~AG~ 127 (293)
T PRK05866 119 DILINNAGR 127 (293)
T ss_pred CEEEECCCC
Confidence 999999874
No 175
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.17 E-value=0.0077 Score=55.00 Aligned_cols=81 Identities=16% Similarity=0.166 Sum_probs=53.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eChh---hHHH-Hhhh-cCCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTEE---ELRN-ISRD-ASIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~~---d~~~-i~~~-t~g~g~ 284 (405)
.|.++||+||+|++|.+.++.+...|++++.+.++.++.++..+..+..+.... .|-. +... +.+. ....++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 578999999999999999999999999999888765443333344444343221 2322 2222 2221 113468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++++.|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999974
No 176
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.16 E-value=0.0026 Score=57.92 Aligned_cols=80 Identities=16% Similarity=0.228 Sum_probs=53.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eCh---hhHHH-HhhhcC-CCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTE---EELRN-ISRDAS-IPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~---~d~~~-i~~~t~-g~g~ 284 (405)
+|+++||.|++|++|..+++.+...|++++.+.++.++.+...+..+..+.... .|- ++..+ +..... ..++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999999999999988887665444444444455555321 232 22223 222211 2468
Q ss_pred cEEEECCC
Q psy2960 285 KLALNCVG 292 (405)
Q Consensus 285 Dvvld~~g 292 (405)
|+||++.|
T Consensus 84 d~vi~~ag 91 (253)
T PRK08217 84 NGLINNAG 91 (253)
T ss_pred CEEEECCC
Confidence 99999987
No 177
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.16 E-value=0.0093 Score=52.48 Aligned_cols=100 Identities=14% Similarity=0.171 Sum_probs=63.4
Q ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHHHcC--CcEEEEecCCcchHHHHHHHHHcC-CcEEe-ChhhHHH-HhhhcCCC
Q psy2960 208 YNSLSPGDVVIQNGANSACGQNVIQIARHWG--LKTINIVRNRDDIDKLKSYLKSLG-ADYVF-TEEELRN-ISRDASIP 282 (405)
Q Consensus 208 ~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G--~~v~~~~~~~~~~~~~~~~~~~lg-~~~v~-~~~d~~~-i~~~t~g~ 282 (405)
..++.+|++||-.|+ |. |..++++|+..+ .+++++-.+++..+...+.++.+| .+.+. ...|..+ +... ..
T Consensus 35 ~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~--~~ 110 (198)
T PRK00377 35 KLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTI--NE 110 (198)
T ss_pred HcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhc--CC
Confidence 368899999999999 44 999999998874 456666444333333334455666 33332 1223333 3222 24
Q ss_pred CCcEEEECCCch----hHHHHHHhcccCCEEEE
Q psy2960 283 KPKLALNCVGGN----SATNLLRTLVSKGVMVT 311 (405)
Q Consensus 283 g~Dvvld~~g~~----~~~~~~~~l~~~G~~v~ 311 (405)
.+|.|+...+.. .+..+.+.|+|+|+++.
T Consensus 111 ~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 111 KFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred CCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 699999865532 33456788999999985
No 178
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.0057 Score=56.21 Aligned_cols=80 Identities=16% Similarity=0.213 Sum_probs=50.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCc-EEe--Ch---hhHHH-HhhhcCCCCCc
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD-YVF--TE---EELRN-ISRDASIPKPK 285 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~-~v~--~~---~d~~~-i~~~t~g~g~D 285 (405)
++.++||+||+|++|...+..+...|++|+++.++.+..+...... ..+.. +.+ |- ++... +......+.+|
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 4789999999999999999999999999999887654332222222 12221 121 22 22222 22221135789
Q ss_pred EEEECCCc
Q psy2960 286 LALNCVGG 293 (405)
Q Consensus 286 vvld~~g~ 293 (405)
+++.+.|.
T Consensus 83 ~lv~~ag~ 90 (263)
T PRK09072 83 VLINNAGV 90 (263)
T ss_pred EEEECCCC
Confidence 99999874
No 179
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.13 E-value=0.0071 Score=54.63 Aligned_cols=81 Identities=17% Similarity=0.250 Sum_probs=54.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe---Chhh---HHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---TEEE---LRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~---~~~d---~~~-i~~~t-~g~g~ 284 (405)
++.+|||+|++|++|...++.+...|.+++.+.++.++.+...+..++.+....+ |..+ ... +.+.. .-..+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4578999999999999999999899999988887765544444555555543322 3222 222 22211 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|.++.+.|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999999864
No 180
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.13 E-value=0.00078 Score=67.31 Aligned_cols=91 Identities=13% Similarity=0.106 Sum_probs=60.3
Q ss_pred hcCCCCCCEEE----EeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCc-EEeChhhH--HH-Hhhhc
Q psy2960 208 YNSLSPGDVVI----QNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD-YVFTEEEL--RN-ISRDA 279 (405)
Q Consensus 208 ~~~~~~g~~VL----I~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~-~v~~~~d~--~~-i~~~t 279 (405)
..++++|+++| |+|++|++|.+++|+++.+|++|+++.++..+ +...+..+.+ .++|.+.. .. +...
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~----~~~~~~~~~~~~~~d~~~~~~~~~l~~~- 102 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLT----WAAGWGDRFGALVFDATGITDPADLKAL- 102 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccc----cccCcCCcccEEEEECCCCCCHHHHHHH-
Confidence 35778999998 99999999999999999999999998755431 1111222333 34443321 11 2211
Q ss_pred CCCCCcEEEECCCchhHHHHHHhcccCCEEEEEeccC
Q psy2960 280 SIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMS 316 (405)
Q Consensus 280 ~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~~~ 316 (405)
.......++.|.++|+|+.++...
T Consensus 103 -------------~~~~~~~l~~l~~~griv~i~s~~ 126 (450)
T PRK08261 103 -------------YEFFHPVLRSLAPCGRVVVLGRPP 126 (450)
T ss_pred -------------HHHHHHHHHhccCCCEEEEEcccc
Confidence 133455678888999999998543
No 181
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.13 E-value=0.0085 Score=59.28 Aligned_cols=153 Identities=18% Similarity=0.236 Sum_probs=89.2
Q ss_pred CCCccceEEEEEEEcCCCCCCCCCCEEE-ecC-------CCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHH
Q psy2960 132 AVPGFEGVGEVVEVGSDVSSLAVGDHVI-PDT-------QHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYR 203 (405)
Q Consensus 132 ~~lG~E~~G~V~~vG~~v~~~~~GdrV~-~~~-------~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~ 203 (405)
..-|+|+++.+.+|+++++..-+|+.=+ +-. ...|+......-=-...+++|+.+..+.+.. ..+...++.
T Consensus 90 ~~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a~~~~k~v~~~t~i~-~~~~Sv~~~ 168 (423)
T PRK00045 90 VHEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKAFSVAKRVRTETGIG-AGAVSVASA 168 (423)
T ss_pred hcCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhHhhhcCCC-CCCcCHHHH
Confidence 3579999999999999988755555432 110 0112211111000011244555444433322 224445566
Q ss_pred HHHhhcC---CCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHH-Hhhhc
Q psy2960 204 MLKDYNS---LSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDA 279 (405)
Q Consensus 204 al~~~~~---~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~-i~~~t 279 (405)
++..... -.+|++|+|.|+ |.+|.++++.++..|++.+.+++... +...+++..+|.+ +++..+..+ +
T Consensus 169 Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~--~ra~~la~~~g~~-~~~~~~~~~~l---- 240 (423)
T PRK00045 169 AVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTL--ERAEELAEEFGGE-AIPLDELPEAL---- 240 (423)
T ss_pred HHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCH--HHHHHHHHHcCCc-EeeHHHHHHHh----
Confidence 6643221 257899999999 99999999999999985444442221 2223466777764 444444433 3
Q ss_pred CCCCCcEEEECCCchh
Q psy2960 280 SIPKPKLALNCVGGNS 295 (405)
Q Consensus 280 ~g~g~Dvvld~~g~~~ 295 (405)
.++|+||+|+|.+.
T Consensus 241 --~~aDvVI~aT~s~~ 254 (423)
T PRK00045 241 --AEADIVISSTGAPH 254 (423)
T ss_pred --ccCCEEEECCCCCC
Confidence 35799999998754
No 182
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.003 Score=57.72 Aligned_cols=81 Identities=21% Similarity=0.309 Sum_probs=54.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe---Chh---hHHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---TEE---ELRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~---~~~---d~~~-i~~~t-~g~g~ 284 (405)
.+.+++|.|++|++|.+.+..+...|++++.+.++.++.++..+.+++.+.+..+ |-. +... +.+.. ..+.+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4789999999999999999999899999999987765544444555555543221 322 2222 22211 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++++.|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999999873
No 183
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.11 E-value=0.0076 Score=55.97 Aligned_cols=80 Identities=15% Similarity=0.181 Sum_probs=50.9
Q ss_pred CCCEEEEeCCC--cHHHHHHHHHHHHcCCcEEEEecCCcchHHHH-HHHHHcCCcEE--eChhh---HHH-HhhhcC-CC
Q psy2960 213 PGDVVIQNGAN--SACGQNVIQIARHWGLKTINIVRNRDDIDKLK-SYLKSLGADYV--FTEEE---LRN-ISRDAS-IP 282 (405)
Q Consensus 213 ~g~~VLI~ga~--G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~-~~~~~lg~~~v--~~~~d---~~~-i~~~t~-g~ 282 (405)
.|+++||.||+ +|+|.++++.+...|++|+.+.++.+ ..+++ +...+++.... .|-.| ... +.+... .+
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 47899999997 79999999999899999988765532 12222 23344554322 23222 222 222211 24
Q ss_pred CCcEEEECCCc
Q psy2960 283 KPKLALNCVGG 293 (405)
Q Consensus 283 g~Dvvld~~g~ 293 (405)
.+|+++++.|.
T Consensus 83 ~iDilVnnAG~ 93 (274)
T PRK08415 83 KIDFIVHSVAF 93 (274)
T ss_pred CCCEEEECCcc
Confidence 68999999883
No 184
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.0029 Score=57.81 Aligned_cols=81 Identities=17% Similarity=0.238 Sum_probs=53.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eChh---hHHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTEE---ELRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~~---d~~~-i~~~t-~g~g~ 284 (405)
.|+++||.|++|++|.+.++.+...|++|+.+.++.+..+...+.++..+.+.. .|-. +..+ +.+.. ..+++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999999999999888765544444444444443221 2322 2222 22211 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++++.|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999999873
No 185
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0035 Score=57.62 Aligned_cols=84 Identities=18% Similarity=0.204 Sum_probs=53.9
Q ss_pred CCCCCCEEEEeCCCc-HHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHH-cCCcEE----eChhh---HHH-Hhhhc
Q psy2960 210 SLSPGDVVIQNGANS-ACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADYV----FTEEE---LRN-ISRDA 279 (405)
Q Consensus 210 ~~~~g~~VLI~ga~G-~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~-lg~~~v----~~~~d---~~~-i~~~t 279 (405)
.+..|+++||.|++| ++|.++++.+...|++|+++.++.++.+...+.+++ +|...+ .|..+ ... +.+..
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 345689999999986 899999999999999988877654443333333333 454333 13222 222 22211
Q ss_pred -CCCCCcEEEECCCc
Q psy2960 280 -SIPKPKLALNCVGG 293 (405)
Q Consensus 280 -~g~g~Dvvld~~g~ 293 (405)
..+.+|+++++.|.
T Consensus 93 ~~~g~id~li~~ag~ 107 (262)
T PRK07831 93 ERLGRLDVLVNNAGL 107 (262)
T ss_pred HHcCCCCEEEECCCC
Confidence 12468999999984
No 186
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.0019 Score=60.68 Aligned_cols=78 Identities=14% Similarity=0.214 Sum_probs=51.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCC--cEE---eChhh---HHH-HhhhcC-CC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA--DYV---FTEEE---LRN-ISRDAS-IP 282 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~--~~v---~~~~d---~~~-i~~~t~-g~ 282 (405)
.|+++||+|++|++|.++++.+...|++|+.+.++.++. .+...+++. +.. .|-.| ... +.+... .+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l---~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAEL---AALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999998887654332 233344442 211 23222 222 222211 24
Q ss_pred CCcEEEECCCc
Q psy2960 283 KPKLALNCVGG 293 (405)
Q Consensus 283 g~Dvvld~~g~ 293 (405)
.+|++|++.|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 68999999984
No 187
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.002 Score=58.95 Aligned_cols=78 Identities=18% Similarity=0.175 Sum_probs=52.4
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eChhhHHHHhhhcCCCCCcEEEEC
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTEEELRNISRDASIPKPKLALNC 290 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~~d~~~i~~~t~g~g~Dvvld~ 290 (405)
+.+|||.|++|++|..+++.+...|++|++++++.+..+...+.....+.... .|..+...+.+.. ..++|++|++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~id~vi~~ 80 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAA-EWDVDVLLNN 80 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHh-cCCCCEEEEC
Confidence 46899999999999999999999999999998765443333333344443211 2433433333322 2379999999
Q ss_pred CC
Q psy2960 291 VG 292 (405)
Q Consensus 291 ~g 292 (405)
.|
T Consensus 81 ag 82 (257)
T PRK09291 81 AG 82 (257)
T ss_pred CC
Confidence 87
No 188
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0041 Score=57.17 Aligned_cols=78 Identities=15% Similarity=0.171 Sum_probs=50.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-E--eCh---hhHHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-V--FTE---EELRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v--~~~---~d~~~-i~~~t-~g~g~ 284 (405)
.+.+++|.|++|++|.+.+..+...|++|+.+.++.+.. .+..++++... + .|- ++... +.+.. ..+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNG---AAVAASLGERARFIATDITDDAAIERAVATVVARFGRV 81 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999999999998887664332 23333444321 1 232 22222 22211 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++++.|.
T Consensus 82 d~lv~~ag~ 90 (261)
T PRK08265 82 DILVNLACT 90 (261)
T ss_pred CEEEECCCC
Confidence 999999873
No 189
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.05 E-value=0.0017 Score=56.05 Aligned_cols=74 Identities=19% Similarity=0.262 Sum_probs=51.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCC---cEEeChhh------HHH-HhhhcCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA---DYVFTEEE------LRN-ISRDASIP 282 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~---~~v~~~~d------~~~-i~~~t~g~ 282 (405)
-|.+|||.||++|+|++.++-...+|-+|+++-++. ++++.+++.-. ..+.|-.| +.+ +++. -.
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e----~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~--~P 77 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNE----ERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKE--YP 77 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcH----HHHHHHHhcCcchheeeecccchhhHHHHHHHHHhh--CC
Confidence 488999999999999999999999999999887654 34555544321 23333222 223 3332 35
Q ss_pred CCcEEEECCC
Q psy2960 283 KPKLALNCVG 292 (405)
Q Consensus 283 g~Dvvld~~g 292 (405)
..++++|+.|
T Consensus 78 ~lNvliNNAG 87 (245)
T COG3967 78 NLNVLINNAG 87 (245)
T ss_pred chheeeeccc
Confidence 6799999998
No 190
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.04 E-value=0.0094 Score=59.56 Aligned_cols=79 Identities=13% Similarity=0.167 Sum_probs=52.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eChhh---HHH-Hhhhc-CCCCCcE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEE---LRN-ISRDA-SIPKPKL 286 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d---~~~-i~~~t-~g~g~Dv 286 (405)
+|+++||.|++|++|.+.++.+...|++++.+.++.. .+...+...+++...+ .|-.+ ... +.... ...++|+
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~-~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAA-GEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCcc-HHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 5889999999999999999999999999988865432 2333344455665433 24322 222 22211 1246899
Q ss_pred EEECCC
Q psy2960 287 ALNCVG 292 (405)
Q Consensus 287 vld~~g 292 (405)
+|++.|
T Consensus 288 vi~~AG 293 (450)
T PRK08261 288 VVHNAG 293 (450)
T ss_pred EEECCC
Confidence 999998
No 191
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.01 Score=54.13 Aligned_cols=104 Identities=13% Similarity=0.169 Sum_probs=62.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEec-CCcchHHHHHHHHHcCCcEE---eC---hhhHHH----Hhh----
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVR-NRDDIDKLKSYLKSLGADYV---FT---EEELRN----ISR---- 277 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~-~~~~~~~~~~~~~~lg~~~v---~~---~~d~~~----i~~---- 277 (405)
.|.+++|.|++|++|.++++.+...|++++.+.+ +.+..++........+.... .| .++... +.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 4789999999999999999999999999887653 32322222233333343221 12 122221 221
Q ss_pred hcCCCCCcEEEECCCchh--------------------------HHHHHHhcccCCEEEEEeccC
Q psy2960 278 DASIPKPKLALNCVGGNS--------------------------ATNLLRTLVSKGVMVTYGGMS 316 (405)
Q Consensus 278 ~t~g~g~Dvvld~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~~ 316 (405)
..+..++|+++++.|... +..++..+.+.|+++.++...
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~ 147 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAA 147 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcc
Confidence 112247999999987310 112344556779999998643
No 192
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.01 E-value=0.0022 Score=56.82 Aligned_cols=104 Identities=20% Similarity=0.241 Sum_probs=64.4
Q ss_pred HhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc--EEEEecCCcchHHHHHHHHHcCCcEE-eChhhHHH-HhhhcCC
Q psy2960 206 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK--TINIVRNRDDIDKLKSYLKSLGADYV-FTEEELRN-ISRDASI 281 (405)
Q Consensus 206 ~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~--v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d~~~-i~~~t~g 281 (405)
.+...++||++||-.|+ |.|..++-+|+..|.. |+++-..++-.+...+.+..+|.+.| +...|... ... .
T Consensus 65 l~~L~l~pg~~VLeIGt--GsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~---~ 139 (209)
T PF01135_consen 65 LEALDLKPGDRVLEIGT--GSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPE---E 139 (209)
T ss_dssp HHHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGG---G
T ss_pred HHHHhcCCCCEEEEecC--CCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhcccc---C
Confidence 34577999999999997 6689999999998863 44443332223333455556676533 22233222 222 3
Q ss_pred CCCcEEEECCCchhHHH-HHHhcccCCEEEEEec
Q psy2960 282 PKPKLALNCVGGNSATN-LLRTLVSKGVMVTYGG 314 (405)
Q Consensus 282 ~g~Dvvld~~g~~~~~~-~~~~l~~~G~~v~~g~ 314 (405)
..||.|+-+.+-+.... .++.|++||+++..-.
T Consensus 140 apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi~ 173 (209)
T PF01135_consen 140 APFDRIIVTAAVPEIPEALLEQLKPGGRLVAPIG 173 (209)
T ss_dssp -SEEEEEESSBBSS--HHHHHTEEEEEEEEEEES
T ss_pred CCcCEEEEeeccchHHHHHHHhcCCCcEEEEEEc
Confidence 57999999888777754 5699999999998543
No 193
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.0041 Score=57.21 Aligned_cols=80 Identities=15% Similarity=0.251 Sum_probs=52.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCc-EE--eChhh---HHH-Hhhh-cCCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD-YV--FTEEE---LRN-ISRD-ASIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~-~v--~~~~d---~~~-i~~~-t~g~g~ 284 (405)
+|.++||.|++|++|.+.++.+...|++|+.+.++.+..++..+..+..+.. .+ .|..+ ... +.+. ...+++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999999998887654433333333333432 12 23222 222 2221 112478
Q ss_pred cEEEECCC
Q psy2960 285 KLALNCVG 292 (405)
Q Consensus 285 Dvvld~~g 292 (405)
|+++++.|
T Consensus 89 d~vi~~Ag 96 (263)
T PRK07814 89 DIVVNNVG 96 (263)
T ss_pred CEEEECCC
Confidence 99999987
No 194
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0055 Score=56.00 Aligned_cols=82 Identities=18% Similarity=0.305 Sum_probs=53.1
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCc-EEe--Ch---hhHHH-Hhhh-cCCCC
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD-YVF--TE---EELRN-ISRD-ASIPK 283 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~-~v~--~~---~d~~~-i~~~-t~g~g 283 (405)
..+++|+|.|++|++|.+++..+...|++|+++.++.++.+...+.++..+.. +++ |. ++... +.+. .....
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 35799999999999999999999999999998887655433333333333322 222 22 22222 2221 11346
Q ss_pred CcEEEECCCc
Q psy2960 284 PKLALNCVGG 293 (405)
Q Consensus 284 ~Dvvld~~g~ 293 (405)
+|++|++.|.
T Consensus 87 ~d~li~~ag~ 96 (258)
T PRK06949 87 IDILVNNSGV 96 (258)
T ss_pred CCEEEECCCC
Confidence 8999999983
No 195
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0045 Score=55.75 Aligned_cols=80 Identities=13% Similarity=0.170 Sum_probs=53.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eC---hhhHHH-HhhhcC--CCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FT---EEELRN-ISRDAS--IPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~---~~d~~~-i~~~t~--g~g 283 (405)
.|.+++|.|+++++|.+.+..+...|++|+.+.++.+..++..+..++.+.+.. .| .++... +.+... +..
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 578999999999999999999999999998887765554444444555554322 23 222322 222211 236
Q ss_pred CcEEEECCC
Q psy2960 284 PKLALNCVG 292 (405)
Q Consensus 284 ~Dvvld~~g 292 (405)
+|+++++.|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999986
No 196
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.98 E-value=0.0055 Score=56.01 Aligned_cols=81 Identities=20% Similarity=0.203 Sum_probs=53.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eChh---hHHH-Hhhh-cCCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTEE---ELRN-ISRD-ASIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~~---d~~~-i~~~-t~g~g~ 284 (405)
.|.+|||.|++|++|.+.++.+...|++|+.+.++.++.++..+..++.|.... .|.. +... +.+. .....+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 578999999999999999999988999998887665443334444444443221 1322 2222 2221 113568
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|++|++.|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999974
No 197
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.0099 Score=53.55 Aligned_cols=81 Identities=12% Similarity=0.207 Sum_probs=49.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe--Ch---hhHHH-Hhhhc-CCCCCc
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF--TE---EELRN-ISRDA-SIPKPK 285 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~--~~---~d~~~-i~~~t-~g~g~D 285 (405)
++.+|+|.||+|++|...++.+...|++|+++.++.+..++..+...+.+.-+++ |. +++.. +.+.. ...++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999999999999999988888999998886643322222222211111122 22 22322 22221 124789
Q ss_pred EEEECCCc
Q psy2960 286 LALNCVGG 293 (405)
Q Consensus 286 vvld~~g~ 293 (405)
++|++.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99998864
No 198
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.0078 Score=55.17 Aligned_cols=76 Identities=14% Similarity=0.164 Sum_probs=48.6
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcC-Cc-EE--eChh---hHHH-HhhhcC--CCCC
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLG-AD-YV--FTEE---ELRN-ISRDAS--IPKP 284 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg-~~-~v--~~~~---d~~~-i~~~t~--g~g~ 284 (405)
+++||.||+|++|...++.+...|++|+.+.++.+..+ +....++ .. ++ .|-. +..+ +..... ...+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLA---ALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH---HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 47999999999999999999899999999876644322 2222332 11 11 2322 2333 322211 3568
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++.|.|.
T Consensus 79 d~vi~~ag~ 87 (260)
T PRK08267 79 DVLFNNAGI 87 (260)
T ss_pred CEEEECCCC
Confidence 999999984
No 199
>PRK09186 flagellin modification protein A; Provisional
Probab=96.96 E-value=0.013 Score=53.47 Aligned_cols=80 Identities=19% Similarity=0.274 Sum_probs=51.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHH-HcCCcE----EeChhh---HHH-Hhhhc-CCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK-SLGADY----VFTEEE---LRN-ISRDA-SIP 282 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~-~lg~~~----v~~~~d---~~~-i~~~t-~g~ 282 (405)
.|.+|||.|++|++|...+..+...|++++.+.++.+..++..+.+. ..+... ..|-.| ... +.+.. ...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999999999998876554333333332 223221 123222 322 22221 124
Q ss_pred CCcEEEECCC
Q psy2960 283 KPKLALNCVG 292 (405)
Q Consensus 283 g~Dvvld~~g 292 (405)
++|+++++.+
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 6899999985
No 200
>PRK07985 oxidoreductase; Provisional
Probab=96.96 E-value=0.013 Score=54.96 Aligned_cols=81 Identities=12% Similarity=0.097 Sum_probs=50.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc--chHHHHHHHHHcCCcEE---eChh---hHHH-Hhhhc-CCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD--DIDKLKSYLKSLGADYV---FTEE---ELRN-ISRDA-SIP 282 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~--~~~~~~~~~~~lg~~~v---~~~~---d~~~-i~~~t-~g~ 282 (405)
.|.++||.|++|++|.+.++.+...|++|+.+.++.+ ..++..+..++.|.... .|-. +... +.+.. ..+
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5789999999999999999999999999987654322 22223333344454321 2322 2222 22221 135
Q ss_pred CCcEEEECCCc
Q psy2960 283 KPKLALNCVGG 293 (405)
Q Consensus 283 g~Dvvld~~g~ 293 (405)
++|+++++.|.
T Consensus 128 ~id~lv~~Ag~ 138 (294)
T PRK07985 128 GLDIMALVAGK 138 (294)
T ss_pred CCCEEEECCCC
Confidence 78999998873
No 201
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.95 E-value=0.0076 Score=54.69 Aligned_cols=81 Identities=15% Similarity=0.165 Sum_probs=51.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHHcCCcEE---eChhh---HHH-Hhhhc-CCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD-DIDKLKSYLKSLGADYV---FTEEE---LRN-ISRDA-SIPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~-~~~~~~~~~~~lg~~~v---~~~~d---~~~-i~~~t-~g~g 283 (405)
.+.++||.|++|++|...++.+...|++++...+..+ ...+..+..+..+.... .|..+ ... +.+.. ..++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999999999999999999999999888664322 22223344444555433 23222 222 22211 1247
Q ss_pred CcEEEECCCc
Q psy2960 284 PKLALNCVGG 293 (405)
Q Consensus 284 ~Dvvld~~g~ 293 (405)
+|+++++.|.
T Consensus 82 id~li~~ag~ 91 (246)
T PRK12938 82 IDVLVNNAGI 91 (246)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 202
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.94 E-value=0.014 Score=53.63 Aligned_cols=80 Identities=11% Similarity=0.187 Sum_probs=48.6
Q ss_pred CCCEEEEeCCC--cHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHc-CCcE-E--eC---hhhHHH-HhhhcC-C
Q psy2960 213 PGDVVIQNGAN--SACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL-GADY-V--FT---EEELRN-ISRDAS-I 281 (405)
Q Consensus 213 ~g~~VLI~ga~--G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~l-g~~~-v--~~---~~d~~~-i~~~t~-g 281 (405)
.|++++|.|++ +|+|.++++.....|++|+.+.++....+...+...++ +... . .| .++... +.+... -
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 57899999997 79999999988889999988765422112222233333 2211 1 23 222333 332221 2
Q ss_pred CCCcEEEECCC
Q psy2960 282 PKPKLALNCVG 292 (405)
Q Consensus 282 ~g~Dvvld~~g 292 (405)
+.+|+++++.|
T Consensus 86 g~ld~lv~nag 96 (257)
T PRK08594 86 GVIHGVAHCIA 96 (257)
T ss_pred CCccEEEECcc
Confidence 46899999886
No 203
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0055 Score=55.92 Aligned_cols=81 Identities=15% Similarity=0.244 Sum_probs=54.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eCh---hhHHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTE---EELRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~---~d~~~-i~~~t-~g~g~ 284 (405)
.+.+++|.|++|++|...++.+...|++|+.+.++.+..+...+.+.+.+.... .|. ++... +.+.. ..+.+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 578999999999999999998888999999998776554444455555554321 122 22222 22111 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++++.|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999999874
No 204
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.0048 Score=56.74 Aligned_cols=81 Identities=12% Similarity=0.175 Sum_probs=52.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHc-CCcEE----eChhh---HHH-Hhhhc-CCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL-GADYV----FTEEE---LRN-ISRDA-SIP 282 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~l-g~~~v----~~~~d---~~~-i~~~t-~g~ 282 (405)
.|++++|.||++++|.+.++.+...|++|+.+.++.++.+...+.+.+. +...+ .|-.+ ... +.+.. ..+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999998887755433333333332 21121 23222 222 22221 124
Q ss_pred CCcEEEECCCc
Q psy2960 283 KPKLALNCVGG 293 (405)
Q Consensus 283 g~Dvvld~~g~ 293 (405)
.+|+++++.|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 68999999983
No 205
>PRK06194 hypothetical protein; Provisional
Probab=96.91 E-value=0.0045 Score=57.69 Aligned_cols=81 Identities=21% Similarity=0.316 Sum_probs=51.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-e--Chh---hHHH-Hhhh-cCCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-F--TEE---ELRN-ISRD-ASIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~--~~~---d~~~-i~~~-t~g~g~ 284 (405)
.+.++||.||+|++|...+..+...|++|+.+.++.+..++..+.+...+.... + |-. +... +... ...+++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999989999998887654433333333333343321 2 322 2222 2211 113468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++++.|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999999984
No 206
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.90 E-value=0.0043 Score=52.58 Aligned_cols=79 Identities=22% Similarity=0.325 Sum_probs=50.0
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC---cchHHHHHHHHHcCCcEEe---C---hhhHHH-Hhhhc-CCCC
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNR---DDIDKLKSYLKSLGADYVF---T---EEELRN-ISRDA-SIPK 283 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~---~~~~~~~~~~~~lg~~~v~---~---~~d~~~-i~~~t-~g~g 283 (405)
++|||.||++++|.+.++.+...|+.+++.++.. +..+...+.++..+....+ | .++... +.+.. ....
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4799999999999999988888888666666544 3333344555656643222 2 122222 22221 2457
Q ss_pred CcEEEECCCc
Q psy2960 284 PKLALNCVGG 293 (405)
Q Consensus 284 ~Dvvld~~g~ 293 (405)
+|++|+|.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 8999999884
No 207
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.014 Score=52.93 Aligned_cols=78 Identities=14% Similarity=0.133 Sum_probs=50.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eChhh---HHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTEEE---LRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~~d---~~~-i~~~t-~g~g~ 284 (405)
+|.+|+|.||+|++|.+.++.+...|++++.+.++.+. ..+...+++.... .|..+ ... +.... ...++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPAS---LEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRL 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHH---HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999999999999888765432 2233345554322 13222 222 22111 13468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++++.|.
T Consensus 82 d~vi~~ag~ 90 (249)
T PRK06500 82 DAVFINAGV 90 (249)
T ss_pred CEEEECCCC
Confidence 999999873
No 208
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.0034 Score=57.48 Aligned_cols=80 Identities=18% Similarity=0.179 Sum_probs=52.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eChhh---HHH-HhhhcC-CCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTEEE---LRN-ISRDAS-IPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~~d---~~~-i~~~t~-g~g~ 284 (405)
.|.++||.||+|++|...++.+...|++++.+.++.+.. +..+.+++.+.... .|-.+ ... +.+... ..++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 478999999999999999999999999999888765443 33344444454321 12222 222 222211 2478
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999983
No 209
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0027 Score=58.36 Aligned_cols=80 Identities=20% Similarity=0.261 Sum_probs=52.8
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe---Chhh---HHH-Hhhhc-CCCCCc
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---TEEE---LRN-ISRDA-SIPKPK 285 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~---~~~d---~~~-i~~~t-~g~g~D 285 (405)
+.+|||.|++|++|..+++.+...|++|+++.++.++.+...+.++..+....+ |..+ ... +.+.. ...++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999999999999987755444444444455543222 3222 222 22211 124689
Q ss_pred EEEECCCc
Q psy2960 286 LALNCVGG 293 (405)
Q Consensus 286 vvld~~g~ 293 (405)
+|+.|.|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999873
No 210
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=96.86 E-value=0.007 Score=58.94 Aligned_cols=110 Identities=15% Similarity=0.173 Sum_probs=70.6
Q ss_pred cCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCc-EE-eChh
Q psy2960 193 GITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD-YV-FTEE 270 (405)
Q Consensus 193 ~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~-~v-~~~~ 270 (405)
++..+....+..+.+..++++|++||-.|+ |.|..+..+++..|++|+++.-+++. ++.+++.... .+ +...
T Consensus 147 ~L~~Aq~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~----l~~A~~~~~~l~v~~~~~ 220 (383)
T PRK11705 147 TLEEAQEAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQ----QKLAQERCAGLPVEIRLQ 220 (383)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHhccCeEEEEEC
Confidence 344445556666667788999999999998 57888999999999999888655443 4444433211 11 1111
Q ss_pred hHHHHhhhcCCCCCcEEEEC-----CCch----hHHHHHHhcccCCEEEEEe
Q psy2960 271 ELRNISRDASIPKPKLALNC-----VGGN----SATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 271 d~~~i~~~t~g~g~Dvvld~-----~g~~----~~~~~~~~l~~~G~~v~~g 313 (405)
|. ... ...+|.|+.. +|.. .+....+.|+|+|+++...
T Consensus 221 D~---~~l--~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 221 DY---RDL--NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred ch---hhc--CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 22 111 2468988743 3432 2345678999999998754
No 211
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0063 Score=55.55 Aligned_cols=80 Identities=15% Similarity=0.257 Sum_probs=51.6
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-Ee--Ch---hhHHH-Hhhhc-CCCCCc
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--TE---EELRN-ISRDA-SIPKPK 285 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v~--~~---~d~~~-i~~~t-~g~g~D 285 (405)
|+++||.|++|++|.+.++.+...|++++.+.++.+..++..+.+++.+... .+ |- ++... +.+.. ..+.+|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 5789999999999999999999999999888776544333333444444322 22 22 22222 22211 124689
Q ss_pred EEEECCCc
Q psy2960 286 LALNCVGG 293 (405)
Q Consensus 286 vvld~~g~ 293 (405)
+++++.|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999873
No 212
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.005 Score=58.37 Aligned_cols=81 Identities=17% Similarity=0.155 Sum_probs=52.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHc-C-CcE-E--eChhh---HHH-Hhhhc-CCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL-G-ADY-V--FTEEE---LRN-ISRDA-SIP 282 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~l-g-~~~-v--~~~~d---~~~-i~~~t-~g~ 282 (405)
.|.+++|.||++|+|.+++..+...|++|+.++++.++.++..+.+.+. + ... + .|-.+ ... +.+.. ...
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4789999999999999999998889999999988765544444433332 2 111 1 23322 222 22211 135
Q ss_pred CCcEEEECCCc
Q psy2960 283 KPKLALNCVGG 293 (405)
Q Consensus 283 g~Dvvld~~g~ 293 (405)
.+|++|++.|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 78999998873
No 213
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.0033 Score=58.41 Aligned_cols=81 Identities=15% Similarity=0.153 Sum_probs=52.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eCh---hhHHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTE---EELRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~---~d~~~-i~~~t-~g~g~ 284 (405)
.|.++||.|++|++|.+.+..+...|++|+.+.++.+..++..+.++..|.+.. .|- ++... +.+.. ..+.+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999999999999998887665443333344444454322 232 22222 22211 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++++.|.
T Consensus 85 d~li~nAg~ 93 (275)
T PRK05876 85 DVVFSNAGI 93 (275)
T ss_pred CEEEECCCc
Confidence 999999873
No 214
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.013 Score=54.34 Aligned_cols=81 Identities=21% Similarity=0.204 Sum_probs=52.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCC--c-EE--eChhhHHH---Hhhh-cCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA--D-YV--FTEEELRN---ISRD-ASIPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~--~-~v--~~~~d~~~---i~~~-t~g~g 283 (405)
.+.++||.||+|++|...+..+...|++|+++.++.+..+...+.....+. . .+ .|..|.+. +.+. ...++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 81 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR 81 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence 367899999999999999999888999999988775544443333443332 1 11 23333222 1111 11346
Q ss_pred CcEEEECCCc
Q psy2960 284 PKLALNCVGG 293 (405)
Q Consensus 284 ~Dvvld~~g~ 293 (405)
+|+++.|.|.
T Consensus 82 id~vv~~ag~ 91 (280)
T PRK06914 82 IDLLVNNAGY 91 (280)
T ss_pred eeEEEECCcc
Confidence 8999999874
No 215
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.84 E-value=0.02 Score=52.39 Aligned_cols=80 Identities=21% Similarity=0.350 Sum_probs=51.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eChhh---HHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTEEE---LRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~~d---~~~-i~~~t-~g~g~ 284 (405)
.+.++||.||+|++|.+.++.+...|++|+.+.++. ..+...+.+...+.+.. .|..+ ... +.+.. ...++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999999998877553 22233333344454322 23222 222 22221 12469
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++++.|.
T Consensus 86 d~lv~nAg~ 94 (260)
T PRK12823 86 DVLINNVGG 94 (260)
T ss_pred eEEEECCcc
Confidence 999999873
No 216
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.84 E-value=0.0064 Score=56.34 Aligned_cols=81 Identities=14% Similarity=0.157 Sum_probs=51.2
Q ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe--Ch---hhHHH-HhhhcC-CCC
Q psy2960 213 PGDVVIQNGANS--ACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF--TE---EELRN-ISRDAS-IPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G--~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~--~~---~d~~~-i~~~t~-g~g 283 (405)
.|+++||.|+++ |+|.+.++.+...|++|+.+.++.+..+...+...++|....+ |- ++... +.+... .+.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 578999999986 9999999999999999988765432212222333445543322 32 22332 222211 247
Q ss_pred CcEEEECCCc
Q psy2960 284 PKLALNCVGG 293 (405)
Q Consensus 284 ~Dvvld~~g~ 293 (405)
+|+++++.|.
T Consensus 86 iD~lVnnAG~ 95 (271)
T PRK06505 86 LDFVVHAIGF 95 (271)
T ss_pred CCEEEECCcc
Confidence 9999999873
No 217
>PRK12937 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.011 Score=53.55 Aligned_cols=81 Identities=14% Similarity=0.183 Sum_probs=51.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHHcCCcEE-e--Chh---hHHH-Hhhhc-CCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-IDKLKSYLKSLGADYV-F--TEE---ELRN-ISRDA-SIPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~-~~~~~~~~~~lg~~~v-~--~~~---d~~~-i~~~t-~g~g 283 (405)
++.++||+|++|++|...++.....|++++.+.++.+. .+...+.+...+.... + |-. +..+ +.+.. ..++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999998887755432 1223334444443222 1 222 2222 22211 1246
Q ss_pred CcEEEECCCc
Q psy2960 284 PKLALNCVGG 293 (405)
Q Consensus 284 ~Dvvld~~g~ 293 (405)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (245)
T PRK12937 84 IDVLVNNAGV 93 (245)
T ss_pred CCEEEECCCC
Confidence 8999999873
No 218
>PRK08589 short chain dehydrogenase; Validated
Probab=96.82 E-value=0.0082 Score=55.57 Aligned_cols=80 Identities=15% Similarity=0.190 Sum_probs=52.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-E--eChh---hHHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-V--FTEE---ELRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v--~~~~---d~~~-i~~~t-~g~g~ 284 (405)
.|+++||.|+++++|.+.++.+...|++|+.+.++ +..++..+.+++.+... . .|-. +... +.+.. ..+.+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 57899999999999999999888899999999876 44344444444444321 1 2322 2222 22211 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++++.|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999999873
No 219
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.0072 Score=55.24 Aligned_cols=81 Identities=16% Similarity=0.215 Sum_probs=52.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE---EeChh---hHHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY---VFTEE---ELRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~---v~~~~---d~~~-i~~~t-~g~g~ 284 (405)
++.+|+|.||+|++|.+.+..+...|++|+.+.++.+..+...+.....+... ..|-. +... +.+.. .-+.+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 57899999999999999999999999999988876544333333333334321 12322 2222 22211 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++.+.|.
T Consensus 84 d~vi~~ag~ 92 (258)
T PRK07890 84 DALVNNAFR 92 (258)
T ss_pred cEEEECCcc
Confidence 999998873
No 220
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.01 Score=55.46 Aligned_cols=82 Identities=16% Similarity=0.134 Sum_probs=52.0
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC---------cchHHHHHHHHHcCCcEEe---Ch---hhHHH-H
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR---------DDIDKLKSYLKSLGADYVF---TE---EELRN-I 275 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~---------~~~~~~~~~~~~lg~~~v~---~~---~d~~~-i 275 (405)
-.|.++||.||++++|.+.++.+...|++++++.++. +..+...+.++..|....+ |- ++... +
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 4688999999999999999998888999998876543 2222333333344443221 32 22222 2
Q ss_pred hhhc-CCCCCcEEEECCCc
Q psy2960 276 SRDA-SIPKPKLALNCVGG 293 (405)
Q Consensus 276 ~~~t-~g~g~Dvvld~~g~ 293 (405)
.+.. ..+.+|+++++.|.
T Consensus 84 ~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 2221 12468999999874
No 221
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.80 E-value=0.0078 Score=55.14 Aligned_cols=81 Identities=14% Similarity=0.282 Sum_probs=52.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-E--eChhh---HHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-V--FTEEE---LRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v--~~~~d---~~~-i~~~t-~g~g~ 284 (405)
+|.++||.|++|++|...++.+...|++|+.+.++.++.+...+.....+... + .|..| ... +.+.. ...++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999998899999888876544333333334444321 1 23222 222 22211 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++.+.|.
T Consensus 91 d~vi~~ag~ 99 (259)
T PRK08213 91 DILVNNAGA 99 (259)
T ss_pred CEEEECCCC
Confidence 999999874
No 222
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.0079 Score=54.82 Aligned_cols=81 Identities=14% Similarity=0.247 Sum_probs=52.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-Ee--Ch---hhHHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--TE---EELRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v~--~~---~d~~~-i~~~t-~g~g~ 284 (405)
.+.+|||.|++|++|.+.++.+...|++|+.+.++.+..+...+.+.+.+... .+ |. ++... +.+.. .-..+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46799999999999999999999999999988876544344444444444322 12 22 22222 22221 12358
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++++.|.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999998873
No 223
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.79 E-value=0.011 Score=54.19 Aligned_cols=80 Identities=18% Similarity=0.241 Sum_probs=52.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eChh---hHHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTEE---ELRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~~---d~~~-i~~~t-~g~g~ 284 (405)
.|.+|||.||+|++|.+.++.+...|++|+.+.++ +..+...+...+.+.+.. .|-. +... +.+.. ..+++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999988876 333333444445554321 2322 2222 22221 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++.+.|.
T Consensus 93 d~li~~ag~ 101 (258)
T PRK06935 93 DILVNNAGT 101 (258)
T ss_pred CEEEECCCC
Confidence 999999873
No 224
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.0079 Score=54.42 Aligned_cols=82 Identities=18% Similarity=0.230 Sum_probs=53.1
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-E--eChh---hHHH-Hhhhc-CCCC
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-V--FTEE---ELRN-ISRDA-SIPK 283 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v--~~~~---d~~~-i~~~t-~g~g 283 (405)
..+.++||.|++|++|..++..+...|++|+++.++.++.++..+..++.+... + .|-. +... +.+.. ..+.
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 346789999999999999999999999999998876554333334344444322 1 2322 2222 22211 1246
Q ss_pred CcEEEECCCc
Q psy2960 284 PKLALNCVGG 293 (405)
Q Consensus 284 ~Dvvld~~g~ 293 (405)
+|+++++.|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 8999999984
No 225
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.007 Score=54.80 Aligned_cols=78 Identities=18% Similarity=0.253 Sum_probs=51.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eChhhHHHHhhhc-CCCCCcEEEEC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEELRNISRDA-SIPKPKLALNC 290 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d~~~i~~~t-~g~g~Dvvld~ 290 (405)
.+.+++|+|++|++|...++.+...|++|+.+.++.++. .+.....+...+ .|..+...+.+.. ...++|++|++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ 84 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAAL---DRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC 84 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence 578999999999999999999999999988887664332 233334454333 3433322222211 13468999999
Q ss_pred CCc
Q psy2960 291 VGG 293 (405)
Q Consensus 291 ~g~ 293 (405)
.|.
T Consensus 85 ag~ 87 (245)
T PRK07060 85 AGI 87 (245)
T ss_pred CCC
Confidence 974
No 226
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.77 E-value=0.0086 Score=55.54 Aligned_cols=80 Identities=18% Similarity=0.253 Sum_probs=52.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eCh---hhHHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTE---EELRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~---~d~~~-i~~~t-~g~g~ 284 (405)
.+.+++|.|++|++|.+.+..+...|++|+.+.++.+..+...+.+.+.+.... .|. ++... +.+.. ..+++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999999999999998888765444444444444444321 122 22222 22211 12478
Q ss_pred cEEEECCC
Q psy2960 285 KLALNCVG 292 (405)
Q Consensus 285 Dvvld~~g 292 (405)
|++|++.|
T Consensus 89 d~li~~ag 96 (278)
T PRK08277 89 DILINGAG 96 (278)
T ss_pred CEEEECCC
Confidence 99999987
No 227
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.011 Score=54.22 Aligned_cols=40 Identities=15% Similarity=0.109 Sum_probs=34.7
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc
Q psy2960 210 SLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 249 (405)
Q Consensus 210 ~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~ 249 (405)
..-++.++||.|++|++|..++..+...|++|+.+.++.+
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~ 46 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEA 46 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3357899999999999999999999999999988887644
No 228
>KOG1201|consensus
Probab=96.77 E-value=0.013 Score=53.81 Aligned_cols=78 Identities=18% Similarity=0.347 Sum_probs=56.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCc--EEeC---hhhHHH----HhhhcCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD--YVFT---EEELRN----ISRDASIPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~--~v~~---~~d~~~----i~~~t~g~g 283 (405)
.|+.|||.||++|+|.+.++=...+|++++...-+.+..++-.+..++.|.- .+.| .++..+ +++. -+.
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e--~G~ 114 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKE--VGD 114 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHh--cCC
Confidence 6999999999999999999888889997766665555666677777777632 2223 233322 4444 347
Q ss_pred CcEEEECCC
Q psy2960 284 PKLALNCVG 292 (405)
Q Consensus 284 ~Dvvld~~g 292 (405)
+|+++|.+|
T Consensus 115 V~ILVNNAG 123 (300)
T KOG1201|consen 115 VDILVNNAG 123 (300)
T ss_pred ceEEEeccc
Confidence 999999988
No 229
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.76 E-value=0.012 Score=52.48 Aligned_cols=103 Identities=23% Similarity=0.207 Sum_probs=63.5
Q ss_pred hhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcC--CcEEEEecCCcchHHHHHHHHHcCCcEE-eChhhHHHHhhhcCCCC
Q psy2960 207 DYNSLSPGDVVIQNGANSACGQNVIQIARHWG--LKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEELRNISRDASIPK 283 (405)
Q Consensus 207 ~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G--~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d~~~i~~~t~g~g 283 (405)
....+++|++||-.|+ |.|..+..+++..+ .+++++-.+++..+...+.+...|.+++ +-..|... .......
T Consensus 70 ~~l~~~~g~~VLdIG~--GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~--~~~~~~~ 145 (212)
T PRK13942 70 ELLDLKEGMKVLEIGT--GSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTL--GYEENAP 145 (212)
T ss_pred HHcCCCCcCEEEEECC--cccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc--CCCcCCC
Confidence 4467899999999998 66888889998876 4666664443333333344445565432 11112111 0112357
Q ss_pred CcEEEECCCchhH-HHHHHhcccCCEEEEEe
Q psy2960 284 PKLALNCVGGNSA-TNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 284 ~Dvvld~~g~~~~-~~~~~~l~~~G~~v~~g 313 (405)
+|+|+-+...... ...++.|+++|+++..-
T Consensus 146 fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~~ 176 (212)
T PRK13942 146 YDRIYVTAAGPDIPKPLIEQLKDGGIMVIPV 176 (212)
T ss_pred cCEEEECCCcccchHHHHHhhCCCcEEEEEE
Confidence 9998765444444 45679999999988753
No 230
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.01 Score=54.44 Aligned_cols=81 Identities=12% Similarity=0.132 Sum_probs=52.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHH--cCCcE-E--eCh---hhHHH-Hhhhc-CCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS--LGADY-V--FTE---EELRN-ISRDA-SIP 282 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~--lg~~~-v--~~~---~d~~~-i~~~t-~g~ 282 (405)
.+++++|.|++|++|.++++.+...|++|+.+.++.+..++..+.++. .+... + .|. ++... +.+.. ..+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 478999999999999999999999999999888765544433344433 23221 1 132 22222 22211 124
Q ss_pred CCcEEEECCCc
Q psy2960 283 KPKLALNCVGG 293 (405)
Q Consensus 283 g~Dvvld~~g~ 293 (405)
++|+++++.|.
T Consensus 86 ~id~li~~ag~ 96 (260)
T PRK07063 86 PLDVLVNNAGI 96 (260)
T ss_pred CCcEEEECCCc
Confidence 68999999883
No 231
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.74 E-value=0.0083 Score=55.24 Aligned_cols=81 Identities=16% Similarity=0.192 Sum_probs=53.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eChhh---HHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTEEE---LRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~~d---~~~-i~~~t-~g~g~ 284 (405)
.+.+++|.|+++++|.+.+..+...|++++.+.++.++.++..+..+..|.... .|-.+ ... +.+.. .-..+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 578999999999999999988888999998887765554444444555554322 23222 222 22211 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++.+.|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999874
No 232
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.74 E-value=0.02 Score=53.05 Aligned_cols=104 Identities=17% Similarity=0.155 Sum_probs=62.4
Q ss_pred HHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCC
Q psy2960 203 RMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIP 282 (405)
Q Consensus 203 ~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~ 282 (405)
.++........+.+++|.|+ |++|.+++..+...|++++++.++.++.++..+.+...|.......++. ...
T Consensus 106 ~~l~~~~~~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~-------~~~ 177 (270)
T TIGR00507 106 SDLERLIPLRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMDEL-------PLH 177 (270)
T ss_pred HHHHhcCCCccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechhhh-------ccc
Confidence 33433233456889999999 8999999988888899877776554433333333333333222222110 013
Q ss_pred CCcEEEECCCchhH---H---HHHHhcccCCEEEEEec
Q psy2960 283 KPKLALNCVGGNSA---T---NLLRTLVSKGVMVTYGG 314 (405)
Q Consensus 283 g~Dvvld~~g~~~~---~---~~~~~l~~~G~~v~~g~ 314 (405)
.+|+||+|++.... . -....++++..++.+..
T Consensus 178 ~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y 215 (270)
T TIGR00507 178 RVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVY 215 (270)
T ss_pred CccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence 58999999985321 1 12355777777777753
No 233
>PRK08643 acetoin reductase; Validated
Probab=96.73 E-value=0.011 Score=53.99 Aligned_cols=80 Identities=14% Similarity=0.159 Sum_probs=52.1
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe---Chh---hHHH-Hhhhc-CCCCCc
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---TEE---ELRN-ISRDA-SIPKPK 285 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~---~~~---d~~~-i~~~t-~g~g~D 285 (405)
|+++||.|++|++|...++.+...|++|+.+.++.+..+.....+.+.+....+ |-. +..+ +.+.. ..+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999999999999887655433333444444433221 222 2222 22211 124689
Q ss_pred EEEECCCc
Q psy2960 286 LALNCVGG 293 (405)
Q Consensus 286 vvld~~g~ 293 (405)
++|.+.|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999864
No 234
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.013 Score=54.81 Aligned_cols=81 Identities=12% Similarity=0.220 Sum_probs=51.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHHcCCcEEe---Chh---hHHH-Hhhhc-CCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-IDKLKSYLKSLGADYVF---TEE---ELRN-ISRDA-SIPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~-~~~~~~~~~~lg~~~v~---~~~---d~~~-i~~~t-~g~g 283 (405)
.|.++||.|++|++|...+..+...|++|+.+.++.+. .+...+.+...|.+..+ |-. +... +.+.. ...+
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~ 124 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR 124 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999888899999888765432 22233333344433222 322 2222 22211 1246
Q ss_pred CcEEEECCCc
Q psy2960 284 PKLALNCVGG 293 (405)
Q Consensus 284 ~Dvvld~~g~ 293 (405)
+|++|.+.|.
T Consensus 125 iD~lI~~Ag~ 134 (290)
T PRK06701 125 LDILVNNAAF 134 (290)
T ss_pred CCEEEECCcc
Confidence 8999998874
No 235
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.72 E-value=0.0076 Score=47.37 Aligned_cols=95 Identities=17% Similarity=0.219 Sum_probs=58.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHH-HcCCcEEEEecCCcchHHHHHHHHHcC--CcEEeChhhHHHHhhhcCCCCCcEEEE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIAR-HWGLKTINIVRNRDDIDKLKSYLKSLG--ADYVFTEEELRNISRDASIPKPKLALN 289 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~-~~G~~v~~~~~~~~~~~~~~~~~~~lg--~~~v~~~~d~~~i~~~t~g~g~Dvvld 289 (405)
||.+||-.|+ |.|..++.+++ ..+++++++--+++..+...+.+.+.+ ....+-..|+ . .......++|+|+.
T Consensus 1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~-~-~~~~~~~~~D~v~~ 76 (112)
T PF12847_consen 1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDA-E-FDPDFLEPFDLVIC 76 (112)
T ss_dssp TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCC-H-GGTTTSSCEEEEEE
T ss_pred CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECcc-c-cCcccCCCCCEEEE
Confidence 6899999998 56999999999 478888888544433333333332222 2222222333 1 11122456999998
Q ss_pred CC-Cch----h------HHHHHHhcccCCEEEE
Q psy2960 290 CV-GGN----S------ATNLLRTLVSKGVMVT 311 (405)
Q Consensus 290 ~~-g~~----~------~~~~~~~l~~~G~~v~ 311 (405)
.. ... . +....+.|+|+|+++.
T Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi 109 (112)
T PF12847_consen 77 SGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI 109 (112)
T ss_dssp CSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 77 221 1 3456789999999875
No 236
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.72 E-value=0.009 Score=54.79 Aligned_cols=78 Identities=19% Similarity=0.253 Sum_probs=50.2
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe--Ch---hhHHH-Hhhhc-CCCCCcEEE
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF--TE---EELRN-ISRDA-SIPKPKLAL 288 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~--~~---~d~~~-i~~~t-~g~g~Dvvl 288 (405)
++||.|+++++|.+.++.+...|++|+.+.++.+..++..+.+.+.+.-+.+ |- ++... +.+.. ...++|+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6999999999999999999999999988877654433333333333422222 32 22333 22221 134689999
Q ss_pred ECCCc
Q psy2960 289 NCVGG 293 (405)
Q Consensus 289 d~~g~ 293 (405)
++.|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 99874
No 237
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.70 E-value=0.019 Score=52.43 Aligned_cols=77 Identities=14% Similarity=0.211 Sum_probs=48.2
Q ss_pred CCCEEEEeCCC--cHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCc--EE--eC---hhhHHH-Hhhhc-CC
Q psy2960 213 PGDVVIQNGAN--SACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD--YV--FT---EEELRN-ISRDA-SI 281 (405)
Q Consensus 213 ~g~~VLI~ga~--G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~--~v--~~---~~d~~~-i~~~t-~g 281 (405)
.|++++|.|++ +|+|.+.++.+...|++|+.+.++ ++.+ +.+.++... .. .| .++..+ +.+.. ..
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~---~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMK---KSLQKLVDEEDLLVECDVASDESIERAFATIKERV 81 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHH---HHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence 57899999998 799999999998999999988654 2222 222333211 11 23 222332 22221 12
Q ss_pred CCCcEEEECCCc
Q psy2960 282 PKPKLALNCVGG 293 (405)
Q Consensus 282 ~g~Dvvld~~g~ 293 (405)
+.+|+++++.|.
T Consensus 82 g~iD~lv~nAg~ 93 (252)
T PRK06079 82 GKIDGIVHAIAY 93 (252)
T ss_pred CCCCEEEEcccc
Confidence 469999998873
No 238
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.012 Score=55.65 Aligned_cols=80 Identities=18% Similarity=0.284 Sum_probs=51.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC----------cchHHHHHHHHHcCCcEE-e--C---hhhHHH-H
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR----------DDIDKLKSYLKSLGADYV-F--T---EEELRN-I 275 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~----------~~~~~~~~~~~~lg~~~v-~--~---~~d~~~-i 275 (405)
.|.+++|.||++|+|.++++.+...|++|+.+.++. +..+...+.+...|...+ + | .++... +
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 578999999999999999999999999999887653 222223334444554322 2 2 223332 2
Q ss_pred hhhcC-CCCCcEEEECC-C
Q psy2960 276 SRDAS-IPKPKLALNCV-G 292 (405)
Q Consensus 276 ~~~t~-g~g~Dvvld~~-g 292 (405)
.+... .+.+|+++++. |
T Consensus 87 ~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHcCCccEEEECCcc
Confidence 22211 24689999988 5
No 239
>PRK06196 oxidoreductase; Provisional
Probab=96.70 E-value=0.0063 Score=57.71 Aligned_cols=78 Identities=19% Similarity=0.216 Sum_probs=50.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eChhh---HHH-Hhhhc-CCCCCcE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEE---LRN-ISRDA-SIPKPKL 286 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d---~~~-i~~~t-~g~g~Dv 286 (405)
.|.+|||.||+|++|.+++..+...|++|+.+.++.++.++..+.+.. ...+ .|-.| ... +.+.. ...++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~--v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDG--VEVVMLDLADLESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhh--CeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence 578999999999999999999888999999988765433222222211 2211 23222 222 22221 1357999
Q ss_pred EEECCC
Q psy2960 287 ALNCVG 292 (405)
Q Consensus 287 vld~~g 292 (405)
+|++.|
T Consensus 103 li~nAg 108 (315)
T PRK06196 103 LINNAG 108 (315)
T ss_pred EEECCC
Confidence 999987
No 240
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.69 E-value=0.0058 Score=51.88 Aligned_cols=93 Identities=19% Similarity=0.338 Sum_probs=58.9
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCCchh
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVGGNS 295 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g~~~ 295 (405)
+|.|+||+|-+|...++=|+..|-+|++++++.++...+ +-..-+. ..|++... +.+. -.|+|+||++.|...
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-~~~~i~q-~Difd~~~---~a~~--l~g~DaVIsA~~~~~ 74 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-QGVTILQ-KDIFDLTS---LASD--LAGHDAVISAFGAGA 74 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-ccceeec-ccccChhh---hHhh--hcCCceEEEeccCCC
Confidence 689999999999999999999999999999887653221 0000000 11222221 2122 358999999987531
Q ss_pred ----------HHHHHHhcccCC--EEEEEecc
Q psy2960 296 ----------ATNLLRTLVSKG--VMVTYGGM 315 (405)
Q Consensus 296 ----------~~~~~~~l~~~G--~~v~~g~~ 315 (405)
.+..+..|+.-| |++.+|+.
T Consensus 75 ~~~~~~~~k~~~~li~~l~~agv~RllVVGGA 106 (211)
T COG2910 75 SDNDELHSKSIEALIEALKGAGVPRLLVVGGA 106 (211)
T ss_pred CChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence 112345555533 88888854
No 241
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.015 Score=53.06 Aligned_cols=81 Identities=22% Similarity=0.303 Sum_probs=52.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHHcCCcEE-e--Ch---hhHHH-Hhhhc-CCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-IDKLKSYLKSLGADYV-F--TE---EELRN-ISRDA-SIPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~-~~~~~~~~~~lg~~~v-~--~~---~d~~~-i~~~t-~g~g 283 (405)
.|.++||.|+++++|.++++.+...|++++++.++.+. .++..+.+...+.... + |- ++... +.+.. ..+.
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999988866432 2333344444453221 1 22 22222 22211 1346
Q ss_pred CcEEEECCCc
Q psy2960 284 PKLALNCVGG 293 (405)
Q Consensus 284 ~Dvvld~~g~ 293 (405)
+|++|++.|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 242
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.68 E-value=0.0055 Score=56.34 Aligned_cols=77 Identities=16% Similarity=0.252 Sum_probs=49.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCc-EE--eCh---hhHHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD-YV--FTE---EELRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~-~v--~~~---~d~~~-i~~~t-~g~g~ 284 (405)
+|+++||.|+++++|.+.++.+...|++|+.+.++.++.+ +...+++.. .+ .|- ++... +.+.. ..+.+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 81 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLA---SLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKL 81 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999999999999988876644322 222233321 11 132 22222 22221 12468
Q ss_pred cEEEECCC
Q psy2960 285 KLALNCVG 292 (405)
Q Consensus 285 Dvvld~~g 292 (405)
|+++++.|
T Consensus 82 d~li~~ag 89 (263)
T PRK06200 82 DCFVGNAG 89 (263)
T ss_pred CEEEECCC
Confidence 99999987
No 243
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=96.68 E-value=0.0093 Score=54.21 Aligned_cols=84 Identities=12% Similarity=0.216 Sum_probs=54.8
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE--Ee--C-----hhhHHH-Hhhhc
Q psy2960 210 SLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY--VF--T-----EEELRN-ISRDA 279 (405)
Q Consensus 210 ~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~--v~--~-----~~d~~~-i~~~t 279 (405)
...++.+|+|.|++|++|...++.+...|++|+.+.++.+..+...+.+++.+... ++ + .++... +....
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 34578999999999999999999888899999998877654444444454544321 22 2 222222 21111
Q ss_pred -CCCCCcEEEECCCc
Q psy2960 280 -SIPKPKLALNCVGG 293 (405)
Q Consensus 280 -~g~g~Dvvld~~g~ 293 (405)
....+|++|.+.|.
T Consensus 88 ~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 88 EQFGRLDGVLHNAGL 102 (247)
T ss_pred HHhCCCCEEEECCcc
Confidence 12468999998763
No 244
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.68 E-value=0.0078 Score=57.24 Aligned_cols=80 Identities=18% Similarity=0.236 Sum_probs=52.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHH-cCCcEE----eChh----hH-HHHhhhcCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADYV----FTEE----EL-RNISRDASIP 282 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~-lg~~~v----~~~~----d~-~~i~~~t~g~ 282 (405)
.|.+++|.||++|+|.+.+......|++++.+.++.++.++..+.+++ .+...+ .|-. +. ..+.+..++.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 589999999999999999988888999999988776554433333332 221111 2221 21 2244444444
Q ss_pred CCcEEEECCC
Q psy2960 283 KPKLALNCVG 292 (405)
Q Consensus 283 g~Dvvld~~g 292 (405)
.+|+++++.|
T Consensus 132 didilVnnAG 141 (320)
T PLN02780 132 DVGVLINNVG 141 (320)
T ss_pred CccEEEEecC
Confidence 5779999887
No 245
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.0055 Score=56.03 Aligned_cols=78 Identities=17% Similarity=0.177 Sum_probs=50.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eChhh---HHH-Hhhhc-CCCCCcE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEE---LRN-ISRDA-SIPKPKL 286 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d---~~~-i~~~t-~g~g~Dv 286 (405)
.|++|+|.||+|++|.+.++.....|++++++.++.+.. .+...+++...+ .|..+ ... +.+.. ...++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAG---KAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 588999999999999999999999999999887654321 122234443222 23322 222 22211 1246899
Q ss_pred EEECCCc
Q psy2960 287 ALNCVGG 293 (405)
Q Consensus 287 vld~~g~ 293 (405)
++.+.|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998874
No 246
>PRK06484 short chain dehydrogenase; Validated
Probab=96.67 E-value=0.01 Score=60.37 Aligned_cols=101 Identities=18% Similarity=0.232 Sum_probs=63.9
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eChh---hHHH-Hhhhc-CCCC
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTEE---ELRN-ISRDA-SIPK 283 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~~---d~~~-i~~~t-~g~g 283 (405)
..|+++||.|+++++|.+.++.+...|++|+.+.++.+..+ +...+++.... .|-. +... +.+.. ..+.
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 343 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAK---KLAEALGDEHLSVQADITDEAAVESAFAQIQARWGR 343 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 36889999999999999999999999999998876543322 22233444322 2322 2222 22221 1246
Q ss_pred CcEEEECCCch----h-----------------------HHHHHHhcccCCEEEEEecc
Q psy2960 284 PKLALNCVGGN----S-----------------------ATNLLRTLVSKGVMVTYGGM 315 (405)
Q Consensus 284 ~Dvvld~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~ 315 (405)
+|++|++.|.. . ...++..++++|+++.++..
T Consensus 344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~ 402 (520)
T PRK06484 344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSI 402 (520)
T ss_pred CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECch
Confidence 89999988741 0 11223445667999999864
No 247
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.66 E-value=0.018 Score=54.54 Aligned_cols=101 Identities=17% Similarity=0.232 Sum_probs=66.8
Q ss_pred hhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCC--cEEEEecCCcchHHHHHHHHHcCCcEEeC-hhhHHH-HhhhcCCC
Q psy2960 207 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGL--KTINIVRNRDDIDKLKSYLKSLGADYVFT-EEELRN-ISRDASIP 282 (405)
Q Consensus 207 ~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~--~v~~~~~~~~~~~~~~~~~~~lg~~~v~~-~~d~~~-i~~~t~g~ 282 (405)
+...+++|++||..|+ | .|..++.+++..+. .|+++-.+++..+...+.++..|.+.+.. ..|... ... ..
T Consensus 74 ~~L~i~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~~---~~ 148 (322)
T PRK13943 74 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVPE---FA 148 (322)
T ss_pred HhcCCCCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhcccc---cC
Confidence 3467889999999998 4 69999999998874 46655444333333344455677664432 223322 222 24
Q ss_pred CCcEEEECCCchhHH-HHHHhcccCCEEEEE
Q psy2960 283 KPKLALNCVGGNSAT-NLLRTLVSKGVMVTY 312 (405)
Q Consensus 283 g~Dvvld~~g~~~~~-~~~~~l~~~G~~v~~ 312 (405)
.+|+|+.+.+..... ..++.|+++|+++..
T Consensus 149 ~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 149 PYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 699999988865554 467999999998774
No 248
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.65 E-value=0.0046 Score=58.81 Aligned_cols=80 Identities=15% Similarity=0.091 Sum_probs=50.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCc-EE--eChhh---HHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD-YV--FTEEE---LRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~-~v--~~~~d---~~~-i~~~t-~g~g~ 284 (405)
.+.+++|.|++|++|..+++.+...|++|+.+.++.++.+...+.+...+.. .+ .|-.+ ... +.+.. .+..+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 4789999999999999999988889999999887654433222222211211 11 23222 222 22221 13469
Q ss_pred cEEEECCC
Q psy2960 285 KLALNCVG 292 (405)
Q Consensus 285 Dvvld~~g 292 (405)
|++|++.|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999987
No 249
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.64 E-value=0.014 Score=53.20 Aligned_cols=80 Identities=18% Similarity=0.197 Sum_probs=52.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-Ee--Chh---hHHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--TEE---ELRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v~--~~~---d~~~-i~~~t-~g~g~ 284 (405)
.+.+|||.|++|++|...++.....|++++.+.++.++.+......+..+... ++ |-. +... +.... ...++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46799999999999999999988899999999877655444334444444332 11 322 2222 22211 12468
Q ss_pred cEEEECCC
Q psy2960 285 KLALNCVG 292 (405)
Q Consensus 285 Dvvld~~g 292 (405)
|++|.+.|
T Consensus 83 d~vi~~a~ 90 (258)
T PRK12429 83 DILVNNAG 90 (258)
T ss_pred CEEEECCC
Confidence 99999887
No 250
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.012 Score=54.04 Aligned_cols=79 Identities=19% Similarity=0.298 Sum_probs=51.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHc-CCc-EE--eChhh---HHHHhhhcCCCCCc
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL-GAD-YV--FTEEE---LRNISRDASIPKPK 285 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~l-g~~-~v--~~~~d---~~~i~~~t~g~g~D 285 (405)
.|.+++|.|+++++|.+.++.+...|++|+.+.++.++.++..+.+.+. +.. .+ .|-.+ ...+.+. -..+|
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~--~g~id 83 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE--AGDID 83 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH--hCCCC
Confidence 4789999999999999999999899999988887655433333333332 322 12 23222 2232222 24689
Q ss_pred EEEECCCc
Q psy2960 286 LALNCVGG 293 (405)
Q Consensus 286 vvld~~g~ 293 (405)
+++++.|.
T Consensus 84 ~lv~~ag~ 91 (259)
T PRK06125 84 ILVNNAGA 91 (259)
T ss_pred EEEECCCC
Confidence 99999874
No 251
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=96.62 E-value=0.03 Score=51.42 Aligned_cols=81 Identities=10% Similarity=0.064 Sum_probs=48.9
Q ss_pred CCCEEEEeCCC--cHHHHHHHHHHHHcCCcEEEEecCCcc--hHHHHHHHHHcCCc-EE--eChh---hHHH-Hhhhc-C
Q psy2960 213 PGDVVIQNGAN--SACGQNVIQIARHWGLKTINIVRNRDD--IDKLKSYLKSLGAD-YV--FTEE---ELRN-ISRDA-S 280 (405)
Q Consensus 213 ~g~~VLI~ga~--G~vG~~aiqla~~~G~~v~~~~~~~~~--~~~~~~~~~~lg~~-~v--~~~~---d~~~-i~~~t-~ 280 (405)
.|++++|.|++ +++|.+.+..+...|++|+.+.++.+. .++..+.+.+.+.. .. .|-. +... +.+.. .
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 57899999985 799999999999999999877644321 22233333332221 12 2322 2222 22221 1
Q ss_pred CCCCcEEEECCCc
Q psy2960 281 IPKPKLALNCVGG 293 (405)
Q Consensus 281 g~g~Dvvld~~g~ 293 (405)
.+.+|+++++.|.
T Consensus 85 ~g~iD~lv~nag~ 97 (258)
T PRK07370 85 WGKLDILVHCLAF 97 (258)
T ss_pred cCCCCEEEEcccc
Confidence 2469999999873
No 252
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.62 E-value=0.016 Score=52.59 Aligned_cols=103 Identities=13% Similarity=0.181 Sum_probs=63.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHHcCCcE-E--eChhh---HHH-Hhhhc-CCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD-DIDKLKSYLKSLGADY-V--FTEEE---LRN-ISRDA-SIPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~-~~~~~~~~~~~lg~~~-v--~~~~d---~~~-i~~~t-~g~g 283 (405)
.+.+|||.|++|++|.+.+.-+...|++++..+++.. .........++.+... . .|..+ ... +.+.. .-.+
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 3689999999999999999988899999887775432 2222233444444432 1 23222 222 22211 1247
Q ss_pred CcEEEECCCch----------h----------------HHHHHHhcccCCEEEEEecc
Q psy2960 284 PKLALNCVGGN----------S----------------ATNLLRTLVSKGVMVTYGGM 315 (405)
Q Consensus 284 ~Dvvld~~g~~----------~----------------~~~~~~~l~~~G~~v~~g~~ 315 (405)
+|++|.+.|.. . ...++..+++.|+++.++..
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~ 142 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASV 142 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcch
Confidence 89999999730 0 11234455678999999864
No 253
>PRK09242 tropinone reductase; Provisional
Probab=96.62 E-value=0.014 Score=53.41 Aligned_cols=81 Identities=16% Similarity=0.230 Sum_probs=52.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHc--CCcEE---eCh---hhHHH-Hhhhc-CCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL--GADYV---FTE---EELRN-ISRDA-SIP 282 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~l--g~~~v---~~~---~d~~~-i~~~t-~g~ 282 (405)
.|+++||.|++|++|...+..+...|++++.+.++.+..++..+.+... +.+.. .|- ++... +.+.. ..+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999998887655443333333333 22211 132 22222 22211 134
Q ss_pred CCcEEEECCCc
Q psy2960 283 KPKLALNCVGG 293 (405)
Q Consensus 283 g~Dvvld~~g~ 293 (405)
++|+++.+.|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 68999999984
No 254
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.0098 Score=54.98 Aligned_cols=78 Identities=14% Similarity=0.092 Sum_probs=50.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcC-CcEE-eC---hhhHHH-HhhhcC-CCCCc
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLG-ADYV-FT---EEELRN-ISRDAS-IPKPK 285 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg-~~~v-~~---~~d~~~-i~~~t~-g~g~D 285 (405)
.|.++||+||+|++|...++.+...|++++.+.++.+.. .+....++ ...+ .| .+++.. +.+... ..++|
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALA---KETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPID 80 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHH---HHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 367999999999999999998888999988887654332 22333444 2221 23 223333 222211 24689
Q ss_pred EEEECCCc
Q psy2960 286 LALNCVGG 293 (405)
Q Consensus 286 vvld~~g~ 293 (405)
+++++.|.
T Consensus 81 ~li~~ag~ 88 (273)
T PRK07825 81 VLVNNAGV 88 (273)
T ss_pred EEEECCCc
Confidence 99999873
No 255
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.61 E-value=0.028 Score=50.75 Aligned_cols=81 Identities=14% Similarity=0.245 Sum_probs=50.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHHcCCcEE-e--Chhh---HHH-HhhhcC-CCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-IDKLKSYLKSLGADYV-F--TEEE---LRN-ISRDAS-IPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~-~~~~~~~~~~lg~~~v-~--~~~d---~~~-i~~~t~-g~g 283 (405)
.+.++||.|++|++|...+..+...|++|+++.++.++ .+...+.++..+.... + |-.+ ... +.+... ..+
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45799999999999999999999999999888765442 1222233333343322 2 3222 222 222111 246
Q ss_pred CcEEEECCCc
Q psy2960 284 PKLALNCVGG 293 (405)
Q Consensus 284 ~Dvvld~~g~ 293 (405)
+|+|+.+.|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 256
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.031 Score=51.85 Aligned_cols=78 Identities=17% Similarity=0.210 Sum_probs=48.6
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-Ee--Chh---hHHH-HhhhcCCCCCcE
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--TEE---ELRN-ISRDASIPKPKL 286 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v~--~~~---d~~~-i~~~t~g~g~Dv 286 (405)
+++++|.|+ |++|.+++..+. .|++|+.+.++.+..++..+.++..|.+. ++ |-. +... +.+.....++|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 357899998 799999998875 79999998876544333334444444322 12 322 2333 332212346999
Q ss_pred EEECCCc
Q psy2960 287 ALNCVGG 293 (405)
Q Consensus 287 vld~~g~ 293 (405)
++++.|.
T Consensus 80 li~nAG~ 86 (275)
T PRK06940 80 LVHTAGV 86 (275)
T ss_pred EEECCCc
Confidence 9999984
No 257
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.59 E-value=0.014 Score=52.80 Aligned_cols=81 Identities=15% Similarity=0.249 Sum_probs=52.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe---Chhh---HHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---TEEE---LRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~---~~~d---~~~-i~~~t-~g~g~ 284 (405)
.+.+++|.|++|++|...+..+...|++|+.+.++.++.++..+.....+....+ |..+ ... +.+.. ..+++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 3678999999999999999988899999999887655433333344444432221 2222 222 22211 13478
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999998874
No 258
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.014 Score=52.98 Aligned_cols=81 Identities=12% Similarity=0.121 Sum_probs=51.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-E--eChhh---HHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-V--FTEEE---LRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v--~~~~d---~~~-i~~~t-~g~g~ 284 (405)
.+.+++|.|++|++|...++.+...|++++.+.++.+..+...+..++.+... . .|..+ ... +.+.. ...++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999998899999998876543323233333333221 1 23222 222 11111 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+||.+.|.
T Consensus 85 d~vi~~ag~ 93 (250)
T PRK07774 85 DYLVNNAAI 93 (250)
T ss_pred CEEEECCCC
Confidence 999999983
No 259
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.58 E-value=0.01 Score=51.33 Aligned_cols=87 Identities=15% Similarity=0.206 Sum_probs=60.2
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHH-HhhhcCCCCCcEEEEC
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKLALNC 290 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~-i~~~t~g~g~Dvvld~ 290 (405)
-.|.+|.|.|. |.+|+..++.++.+|++|++..++... .......+.. ..++++ +.+ .|+|+.+
T Consensus 34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~----~~~~~~~~~~----~~~l~ell~~------aDiv~~~ 98 (178)
T PF02826_consen 34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKP----EEGADEFGVE----YVSLDELLAQ------ADIVSLH 98 (178)
T ss_dssp STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHH----HHHHHHTTEE----ESSHHHHHHH-------SEEEE-
T ss_pred cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCCh----hhhcccccce----eeehhhhcch------hhhhhhh
Confidence 36899999999 999999999999999999999866532 1223444442 223444 332 5999998
Q ss_pred CCc-h----hH-HHHHHhcccCCEEEEEe
Q psy2960 291 VGG-N----SA-TNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 291 ~g~-~----~~-~~~~~~l~~~G~~v~~g 313 (405)
+.. + .+ .+.+..|+++..||.++
T Consensus 99 ~plt~~T~~li~~~~l~~mk~ga~lvN~a 127 (178)
T PF02826_consen 99 LPLTPETRGLINAEFLAKMKPGAVLVNVA 127 (178)
T ss_dssp SSSSTTTTTSBSHHHHHTSTTTEEEEESS
T ss_pred hccccccceeeeeeeeeccccceEEEecc
Confidence 863 2 22 34689999999888876
No 260
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.013 Score=53.26 Aligned_cols=80 Identities=16% Similarity=0.222 Sum_probs=51.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-Ee--Chhh---HHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--TEEE---LRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v~--~~~d---~~~-i~~~t-~g~g~ 284 (405)
.|.+++|.||+|++|...++.+...|++++.+.++.+..+...+..+ .+... ++ |-.| ..+ +.+.. ..+++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46799999999999999999888889999999877554333333332 23321 11 3222 222 22111 12478
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++.+.|.
T Consensus 83 d~vi~~ag~ 91 (252)
T PRK06138 83 DVLVNNAGF 91 (252)
T ss_pred CEEEECCCC
Confidence 999999984
No 261
>PRK06720 hypothetical protein; Provisional
Probab=96.58 E-value=0.021 Score=48.89 Aligned_cols=80 Identities=19% Similarity=0.278 Sum_probs=49.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-e--Chhh---HHH-Hhhh-cCCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-F--TEEE---LRN-ISRD-ASIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~--~~~d---~~~-i~~~-t~g~g~ 284 (405)
.|.+++|.|+++++|.+.+......|++++.+.++.+..+...+.+.+.+.... + |..+ +.. +.+. ...+++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999998888999988887554332222233334443321 2 3222 222 2111 113468
Q ss_pred cEEEECCC
Q psy2960 285 KLALNCVG 292 (405)
Q Consensus 285 Dvvld~~g 292 (405)
|+++++.|
T Consensus 95 DilVnnAG 102 (169)
T PRK06720 95 DMLFQNAG 102 (169)
T ss_pred CEEEECCC
Confidence 99999877
No 262
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.57 E-value=0.013 Score=53.28 Aligned_cols=81 Identities=12% Similarity=0.229 Sum_probs=51.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEE-ecCCcchHHHHHHHHHcCCcEE---eChhh---HHH-Hhhhc-CCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINI-VRNRDDIDKLKSYLKSLGADYV---FTEEE---LRN-ISRDA-SIPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~-~~~~~~~~~~~~~~~~lg~~~v---~~~~d---~~~-i~~~t-~g~g 283 (405)
+|.++||.|++|++|...+..+...|++|+.. .++.++.++..+..+..+.... .|-.+ ... +.+.. ...+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999998775 3443333333344445554322 23222 222 22221 1246
Q ss_pred CcEEEECCCc
Q psy2960 284 PKLALNCVGG 293 (405)
Q Consensus 284 ~Dvvld~~g~ 293 (405)
+|++|++.|.
T Consensus 83 id~vi~~ag~ 92 (250)
T PRK08063 83 LDVFVNNAAS 92 (250)
T ss_pred CCEEEECCCC
Confidence 8999998873
No 263
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=96.57 E-value=0.022 Score=55.73 Aligned_cols=106 Identities=16% Similarity=0.194 Sum_probs=63.1
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHH---HHHHHHHc-CCcEE-eChhhHHHHhhhcC--CC
Q psy2960 210 SLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDK---LKSYLKSL-GADYV-FTEEELRNISRDAS--IP 282 (405)
Q Consensus 210 ~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~---~~~~~~~l-g~~~v-~~~~d~~~i~~~t~--g~ 282 (405)
+-..+.+|||.||+|.+|..++..+...|.+|++++++.++.+. ..+..... +...+ .|..|.+.+.+... +.
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~ 135 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGD 135 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCC
Confidence 44568899999999999999999998899999999876532110 01111112 33323 24333222222211 22
Q ss_pred CCcEEEECCCchh-------------HHHHHHhcccC--CEEEEEecc
Q psy2960 283 KPKLALNCVGGNS-------------ATNLLRTLVSK--GVMVTYGGM 315 (405)
Q Consensus 283 g~Dvvld~~g~~~-------------~~~~~~~l~~~--G~~v~~g~~ 315 (405)
++|+|++|++... ....++.+... ++|+.++..
T Consensus 136 ~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 136 PVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred CCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 6999999987421 12234444433 478888754
No 264
>PRK08017 oxidoreductase; Provisional
Probab=96.57 E-value=0.012 Score=53.78 Aligned_cols=74 Identities=18% Similarity=0.223 Sum_probs=50.4
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe-Chhh---HHH----HhhhcCCCCCcE
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-TEEE---LRN----ISRDASIPKPKL 286 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~-~~~d---~~~----i~~~t~g~g~Dv 286 (405)
++|||.|++|++|.+.++.+...|++++++.++.++ .+.+++.+.+.+. |..+ ... +.+.+ +..+|.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~~~~~ 77 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDD----VARMNSLGFTGILLDLDDPESVERAADEVIALT-DNRLYG 77 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH----hHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhc-CCCCeE
Confidence 579999999999999999999999999888765432 4445556665442 3222 222 22222 346899
Q ss_pred EEECCCc
Q psy2960 287 ALNCVGG 293 (405)
Q Consensus 287 vld~~g~ 293 (405)
++.+.|.
T Consensus 78 ii~~ag~ 84 (256)
T PRK08017 78 LFNNAGF 84 (256)
T ss_pred EEECCCC
Confidence 9988763
No 265
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.01 Score=53.56 Aligned_cols=80 Identities=19% Similarity=0.307 Sum_probs=52.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE----EeCh-----hhHHH----Hhhhc
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY----VFTE-----EELRN----ISRDA 279 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~----v~~~-----~d~~~----i~~~t 279 (405)
+|.+|+|.|++|++|...++.+...|++|+++.++.+..+...+.+.+.+... -.|. +++.. +.+..
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999998877654443334443333211 1221 12222 32222
Q ss_pred CCCCCcEEEECCCc
Q psy2960 280 SIPKPKLALNCVGG 293 (405)
Q Consensus 280 ~g~g~Dvvld~~g~ 293 (405)
+..+|++|++.|.
T Consensus 85 -~~~id~vi~~ag~ 97 (239)
T PRK08703 85 -QGKLDGIVHCAGY 97 (239)
T ss_pred -CCCCCEEEEeccc
Confidence 2468999999984
No 266
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.55 E-value=0.014 Score=53.44 Aligned_cols=81 Identities=19% Similarity=0.255 Sum_probs=52.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eChhh---HHH-Hhhh-cCCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTEEE---LRN-ISRD-ASIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~~d---~~~-i~~~-t~g~g~ 284 (405)
.+.+|||.|++|++|...+..+...|++++.+.++.+..+...+..+..+.+.. .|-.+ ..+ +... ....++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 479999999999999999998889999999887665443333333344443321 23222 222 2221 113468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++++.|.
T Consensus 90 d~li~~ag~ 98 (255)
T PRK06113 90 DILVNNAGG 98 (255)
T ss_pred CEEEECCCC
Confidence 999999873
No 267
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.54 E-value=0.017 Score=52.47 Aligned_cols=80 Identities=15% Similarity=0.250 Sum_probs=52.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-Ee--Chhh---HHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--TEEE---LRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v~--~~~d---~~~-i~~~t-~g~g~ 284 (405)
++.++||.||+|++|...++.+...|++|+.+.++.+...+..+..++.+... ++ |..+ ... +.+.. ...++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999988876554333334344444322 22 2222 222 22211 12468
Q ss_pred cEEEECCC
Q psy2960 285 KLALNCVG 292 (405)
Q Consensus 285 Dvvld~~g 292 (405)
|++|.+.|
T Consensus 82 d~vi~~ag 89 (250)
T TIGR03206 82 DVLVNNAG 89 (250)
T ss_pred CEEEECCC
Confidence 99999997
No 268
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=96.54 E-value=0.034 Score=53.52 Aligned_cols=79 Identities=13% Similarity=0.118 Sum_probs=50.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCC--cEE-eChhhHHHHhhhcCCCCCcEEEE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA--DYV-FTEEELRNISRDASIPKPKLALN 289 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~--~~v-~~~~d~~~i~~~t~g~g~Dvvld 289 (405)
.|.+|||.||+|.+|..+++.+...|.+|+++.++.+......+.. ..+. ..+ .|-.+.+.+.+.....++|+||.
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih 81 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELL-NLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH 81 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHH-hhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence 4789999999999999999999999999998876654322221212 1121 111 23333222333322336899999
Q ss_pred CCC
Q psy2960 290 CVG 292 (405)
Q Consensus 290 ~~g 292 (405)
+.+
T Consensus 82 ~A~ 84 (349)
T TIGR02622 82 LAA 84 (349)
T ss_pred CCc
Confidence 987
No 269
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.54 E-value=0.013 Score=52.92 Aligned_cols=80 Identities=21% Similarity=0.294 Sum_probs=49.3
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEE-ecCCcchHHHHHHHHHcCCcEEe---Chhh---HHH-Hhhhc-CCCCC
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINI-VRNRDDIDKLKSYLKSLGADYVF---TEEE---LRN-ISRDA-SIPKP 284 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~-~~~~~~~~~~~~~~~~lg~~~v~---~~~d---~~~-i~~~t-~g~g~ 284 (405)
+.++||.|++|++|...+..+...|++++.+ .++.+..+...+.+...+....+ |..+ ... +.+.. ...++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999998888889999888 65544333333333333322211 3222 222 21110 12368
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+||.+.|.
T Consensus 85 d~vi~~ag~ 93 (247)
T PRK05565 85 DILVNNAGI 93 (247)
T ss_pred CEEEECCCc
Confidence 999998874
No 270
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.52 E-value=0.019 Score=52.48 Aligned_cols=81 Identities=19% Similarity=0.272 Sum_probs=53.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-E--eCh---hhHHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-V--FTE---EELRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v--~~~---~d~~~-i~~~t-~g~g~ 284 (405)
.|.+++|.|++|++|...+..+...|++++.+.++.+..+...+.+++.|... . .|- ++... +.+.. ..+.+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 58999999999999999999888899999998876544333344444445321 1 132 22222 22211 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++.+.|.
T Consensus 90 d~vi~~ag~ 98 (256)
T PRK06124 90 DILVNNVGA 98 (256)
T ss_pred CEEEECCCC
Confidence 999999884
No 271
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.016 Score=53.60 Aligned_cols=77 Identities=13% Similarity=0.201 Sum_probs=48.1
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-Ee--Ch---hhHHH-Hhhhc-CCCCCc
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--TE---EELRN-ISRDA-SIPKPK 285 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v~--~~---~d~~~-i~~~t-~g~g~D 285 (405)
+.+|||.|++|++|..+++.+...|++|+.+.++.+.. .+....++... ++ |. ++... +.+.. .-.++|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 79 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATL---ADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLD 79 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHH---HHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999998888899998888664332 12222233221 11 22 22222 22211 124689
Q ss_pred EEEECCCc
Q psy2960 286 LALNCVGG 293 (405)
Q Consensus 286 vvld~~g~ 293 (405)
+++.|.|.
T Consensus 80 ~vi~~ag~ 87 (275)
T PRK08263 80 IVVNNAGY 87 (275)
T ss_pred EEEECCCC
Confidence 99999874
No 272
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.014 Score=54.03 Aligned_cols=81 Identities=12% Similarity=0.190 Sum_probs=51.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe---Chhh---HHH-Hhhh-cCCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---TEEE---LRN-ISRD-ASIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~---~~~d---~~~-i~~~-t~g~g~ 284 (405)
+..+++|.||+|++|.+.++.+...|++|+++.++.+..+...+..+..+....+ |..+ ... +.+. ....++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 4568999999999999999988889999988886644333223333444543221 3222 222 2221 112468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|++|.+.|.
T Consensus 89 d~vi~~Ag~ 97 (274)
T PRK07775 89 EVLVSGAGD 97 (274)
T ss_pred CEEEECCCc
Confidence 999999874
No 273
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.50 E-value=0.019 Score=52.50 Aligned_cols=79 Identities=16% Similarity=0.265 Sum_probs=51.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eCh---hhHHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTE---EELRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~---~d~~~-i~~~t-~g~g~ 284 (405)
.|+++||.||++++|.+.++.+...|++|+.+.++. .+...+...+.+.+.. .|- ++... +.+.. ..+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE--APETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch--HHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999999999999998876442 1223344445554322 232 22333 22211 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++++.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999999873
No 274
>PRK06484 short chain dehydrogenase; Validated
Probab=96.49 E-value=0.016 Score=59.05 Aligned_cols=78 Identities=21% Similarity=0.248 Sum_probs=52.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eChh---hHHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTEE---ELRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~~---d~~~-i~~~t-~g~g~ 284 (405)
+|+++||+|+++++|.+.++.+...|++|+.+.++.+.. .+...+++.... .|.. +... +.+.. ..+++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERA---RERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 578999999999999999999999999999887654332 233445554321 2322 2222 22221 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++++.|.
T Consensus 81 D~li~nag~ 89 (520)
T PRK06484 81 DVLVNNAGV 89 (520)
T ss_pred CEEEECCCc
Confidence 999999874
No 275
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.013 Score=53.72 Aligned_cols=36 Identities=25% Similarity=0.192 Sum_probs=31.4
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 249 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~ 249 (405)
+.+|||.|++|++|.+.+..+...|++++.+.++.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~ 37 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTD 37 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 468999999999999999999889999988876543
No 276
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.019 Score=51.39 Aligned_cols=75 Identities=15% Similarity=0.154 Sum_probs=49.2
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE--eChhh---HHHHhhhcCCCCCcEEEE
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV--FTEEE---LRNISRDASIPKPKLALN 289 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v--~~~~d---~~~i~~~t~g~g~Dvvld 289 (405)
.+|+|.|++|++|.+.+..+...|++|+++.++.+..+ .+.+++...+ .|-.| ...+.+.....++|+++.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~ 77 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDT----ALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFV 77 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchH----HHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEE
Confidence 47999999999999999888889999999887765422 2223322222 23222 333333333457999999
Q ss_pred CCCc
Q psy2960 290 CVGG 293 (405)
Q Consensus 290 ~~g~ 293 (405)
+.|.
T Consensus 78 ~ag~ 81 (225)
T PRK08177 78 NAGI 81 (225)
T ss_pred cCcc
Confidence 8763
No 277
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.49 E-value=0.014 Score=53.69 Aligned_cols=80 Identities=13% Similarity=0.216 Sum_probs=49.5
Q ss_pred CCCEEEEeCC--CcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHH-HHcCCcEEe--C---hhhHHH-HhhhcC-CC
Q psy2960 213 PGDVVIQNGA--NSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYVF--T---EEELRN-ISRDAS-IP 282 (405)
Q Consensus 213 ~g~~VLI~ga--~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~-~~lg~~~v~--~---~~d~~~-i~~~t~-g~ 282 (405)
.|.++||.|| ++|+|.+.++.+...|++|+.+.+. +..++..+.+ .++|....+ | .++... +.+... ..
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVV-DKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCc-HHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 5789999996 5799999999999999999887543 2222333333 333432222 3 223333 222211 24
Q ss_pred CCcEEEECCCc
Q psy2960 283 KPKLALNCVGG 293 (405)
Q Consensus 283 g~Dvvld~~g~ 293 (405)
++|+++++.|.
T Consensus 84 ~iD~lVnnAG~ 94 (261)
T PRK08690 84 GLDGLVHSIGF 94 (261)
T ss_pred CCcEEEECCcc
Confidence 69999999874
No 278
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.48 E-value=0.016 Score=53.20 Aligned_cols=79 Identities=14% Similarity=0.226 Sum_probs=49.3
Q ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHH-HHcCCcEE--eCh---hhHHH-HhhhcC-CC
Q psy2960 213 PGDVVIQNGANS--ACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYV--FTE---EELRN-ISRDAS-IP 282 (405)
Q Consensus 213 ~g~~VLI~ga~G--~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~-~~lg~~~v--~~~---~d~~~-i~~~t~-g~ 282 (405)
.|++++|.|+++ |+|.+.++.+...|++|+.+.++ +..++..+.+ .+.|.... .|- ++... +.+... .+
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~-~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQS-EVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG 85 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCc-hHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 578999999986 89999998888899998887654 2222223322 33454332 232 22333 322211 24
Q ss_pred CCcEEEECCC
Q psy2960 283 KPKLALNCVG 292 (405)
Q Consensus 283 g~Dvvld~~g 292 (405)
.+|+++++.|
T Consensus 86 ~iDilVnnag 95 (260)
T PRK06603 86 SFDFLLHGMA 95 (260)
T ss_pred CccEEEEccc
Confidence 6999999887
No 279
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.48 E-value=0.0078 Score=55.29 Aligned_cols=77 Identities=14% Similarity=0.194 Sum_probs=48.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-E--eChhh---HHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-V--FTEEE---LRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v--~~~~d---~~~-i~~~t-~g~g~ 284 (405)
++++++|.||+|++|.++++.+...|++|+.+.++.+..+ +.....+.+. . .|-.+ ... +.+.. ..+.+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQ---ELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKI 80 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999999999998876543221 1222233221 1 13222 222 22221 12468
Q ss_pred cEEEECCC
Q psy2960 285 KLALNCVG 292 (405)
Q Consensus 285 Dvvld~~g 292 (405)
|+++++.|
T Consensus 81 d~li~~Ag 88 (262)
T TIGR03325 81 DCLIPNAG 88 (262)
T ss_pred CEEEECCC
Confidence 99999986
No 280
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.46 E-value=0.023 Score=51.74 Aligned_cols=75 Identities=16% Similarity=0.266 Sum_probs=47.8
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eChhh---HHH-Hhhhc-CCCCCcEE
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTEEE---LRN-ISRDA-SIPKPKLA 287 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~~d---~~~-i~~~t-~g~g~Dvv 287 (405)
+|+|.|++|++|.+.+..+...|++|+.+.++.++.+ +....++.+.. .|-.+ ... +.+.. ..+++|++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQ---ELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHH---HHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999999999999999999999998887644322 22223343221 23222 222 22221 12468999
Q ss_pred EECCCc
Q psy2960 288 LNCVGG 293 (405)
Q Consensus 288 ld~~g~ 293 (405)
+.+.|.
T Consensus 79 i~~ag~ 84 (248)
T PRK10538 79 VNNAGL 84 (248)
T ss_pred EECCCc
Confidence 998874
No 281
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.46 E-value=0.019 Score=53.23 Aligned_cols=81 Identities=15% Similarity=0.131 Sum_probs=50.9
Q ss_pred CCCCCEEEEeCCC--cHHHHHHHHHHHHcCCcEEEEecCCcchHHHHH-HHHHcCCcEEe--Ch---hhHHH-Hhhhc-C
Q psy2960 211 LSPGDVVIQNGAN--SACGQNVIQIARHWGLKTINIVRNRDDIDKLKS-YLKSLGADYVF--TE---EELRN-ISRDA-S 280 (405)
Q Consensus 211 ~~~g~~VLI~ga~--G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~-~~~~lg~~~v~--~~---~d~~~-i~~~t-~ 280 (405)
.-.|+++||.|++ +|+|.+.++.+...|++|+.+.++ +...++++ ...++|....+ |- ++... +.+.. .
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~-~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQG-DALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCc-hHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 3467899999996 799999999999999998877544 22222333 33445532222 32 22333 32221 1
Q ss_pred CCCCcEEEECCC
Q psy2960 281 IPKPKLALNCVG 292 (405)
Q Consensus 281 g~g~Dvvld~~g 292 (405)
.+.+|+++++.|
T Consensus 86 ~g~iD~lv~nAG 97 (272)
T PRK08159 86 WGKLDFVVHAIG 97 (272)
T ss_pred cCCCcEEEECCc
Confidence 346899999987
No 282
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.44 E-value=0.0076 Score=54.69 Aligned_cols=81 Identities=15% Similarity=0.200 Sum_probs=52.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-Ee--Chhh---HHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--TEEE---LRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v~--~~~d---~~~-i~~~t-~g~g~ 284 (405)
.+.+|||.||+|++|...+..+...|++|+++.++.++.....+.+.+.+.+. ++ |-.+ ... +.+.. ....+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 46799999999999999999888899999999877554344444444444322 11 2222 222 22211 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+|+.+.|.
T Consensus 85 d~vi~~ag~ 93 (251)
T PRK12826 85 DILVANAGI 93 (251)
T ss_pred CEEEECCCC
Confidence 999999864
No 283
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.018 Score=54.23 Aligned_cols=80 Identities=24% Similarity=0.322 Sum_probs=50.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHH-c-CCcE-E--eChhh---HHH-Hhhhc-CCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-L-GADY-V--FTEEE---LRN-ISRDA-SIP 282 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~-l-g~~~-v--~~~~d---~~~-i~~~t-~g~ 282 (405)
.|.+|+|.||+|++|.++++.+...|++++.+.++.++.++..+.+.+ . +... + .|-.+ ... +.+.. ...
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 578999999999999999998888899998888765443322222222 1 1211 1 23323 222 22221 124
Q ss_pred CCcEEEECCC
Q psy2960 283 KPKLALNCVG 292 (405)
Q Consensus 283 g~Dvvld~~g 292 (405)
++|++|++.|
T Consensus 95 ~iD~li~nAg 104 (306)
T PRK06197 95 RIDLLINNAG 104 (306)
T ss_pred CCCEEEECCc
Confidence 6899999987
No 284
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.44 E-value=0.046 Score=47.84 Aligned_cols=81 Identities=11% Similarity=0.165 Sum_probs=50.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHH-HcCCcEE-eChhhHHHHhhhcCCCCCcEEEEC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK-SLGADYV-FTEEELRNISRDASIPKPKLALNC 290 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~-~lg~~~v-~~~~d~~~i~~~t~g~g~Dvvld~ 290 (405)
.+.+++|.|++|++|.+++..+...|++++.+.++.++.+...+.+. ..+.... .+..+.+++.+.. .+.|+||.+
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~diVi~a 104 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAI--KGADVVFAA 104 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHH--hcCCEEEEC
Confidence 67899999999999999998888889988888765443222222222 1233221 2222222222221 367999998
Q ss_pred CCchh
Q psy2960 291 VGGNS 295 (405)
Q Consensus 291 ~g~~~ 295 (405)
++...
T Consensus 105 t~~g~ 109 (194)
T cd01078 105 GAAGV 109 (194)
T ss_pred CCCCc
Confidence 87654
No 285
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.44 E-value=0.023 Score=53.91 Aligned_cols=94 Identities=16% Similarity=0.247 Sum_probs=60.8
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe-ChhhHHHHhhhcCCCCCcEEEECCCch
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRNISRDASIPKPKLALNCVGGN 294 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~-~~~d~~~i~~~t~g~g~Dvvld~~g~~ 294 (405)
+|||.||+|-+|...++.+...|.+|.+++++.++ .......+.+.+. |..|...+.+.. .++|+|+++++..
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~----~~~l~~~~v~~v~~Dl~d~~~l~~al--~g~d~Vi~~~~~~ 75 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRK----ASFLKEWGAELVYGDLSLPETLPPSF--KGVTAIIDASTSR 75 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHH----hhhHhhcCCEEEECCCCCHHHHHHHH--CCCCEEEECCCCC
Confidence 69999999999999999999999999999876432 2233344655442 333433333332 3689999987631
Q ss_pred h-------------HHHHHHhcccCC--EEEEEecc
Q psy2960 295 S-------------ATNLLRTLVSKG--VMVTYGGM 315 (405)
Q Consensus 295 ~-------------~~~~~~~l~~~G--~~v~~g~~ 315 (405)
. ....++.++..| +|+.++..
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 1 122345554444 88888753
No 286
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.016 Score=53.61 Aligned_cols=80 Identities=14% Similarity=0.181 Sum_probs=51.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcC--Cc-EEe--Ch---hhHHH-Hhhhc-CCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLG--AD-YVF--TE---EELRN-ISRDA-SIP 282 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg--~~-~v~--~~---~d~~~-i~~~t-~g~ 282 (405)
++.++||.|++|++|..+++.+...|++|+.+.++.++.+...+.....+ .. .++ |- ++... +.+.. ...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999999988876544333333333322 11 122 32 22222 22221 134
Q ss_pred CCcEEEECCC
Q psy2960 283 KPKLALNCVG 292 (405)
Q Consensus 283 g~Dvvld~~g 292 (405)
++|++|.+.|
T Consensus 86 ~~d~li~~ag 95 (276)
T PRK05875 86 RLHGVVHCAG 95 (276)
T ss_pred CCCEEEECCC
Confidence 6899999987
No 287
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.43 E-value=0.027 Score=48.00 Aligned_cols=95 Identities=16% Similarity=0.186 Sum_probs=63.4
Q ss_pred hccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcH-HHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeCh
Q psy2960 191 ISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSA-CGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTE 269 (405)
Q Consensus 191 Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~-vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~ 269 (405)
....|+...++...+.....--.|.+|||.|+ |. +|..++..++..|++++++.++.
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~~--------------------- 78 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSKT--------------------- 78 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECCc---------------------
Confidence 45566666666666655444458999999999 65 69999999999999866665331
Q ss_pred hhHHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEEec
Q psy2960 270 EELRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGG 314 (405)
Q Consensus 270 ~d~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~ 314 (405)
++..+ + ..+|+||.+++.+.+ -.-+.++++-.++.++.
T Consensus 79 ~~l~~~l------~~aDiVIsat~~~~i-i~~~~~~~~~viIDla~ 117 (168)
T cd01080 79 KNLKEHT------KQADIVIVAVGKPGL-VKGDMVKPGAVVIDVGI 117 (168)
T ss_pred hhHHHHH------hhCCEEEEcCCCCce-ecHHHccCCeEEEEccC
Confidence 11122 2 246999999998663 22245666666777763
No 288
>PRK12743 oxidoreductase; Provisional
Probab=96.41 E-value=0.023 Score=51.94 Aligned_cols=78 Identities=12% Similarity=0.173 Sum_probs=50.9
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHHcCCcEE---eChhh---HHH----HhhhcCCC
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-IDKLKSYLKSLGADYV---FTEEE---LRN----ISRDASIP 282 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~-~~~~~~~~~~lg~~~v---~~~~d---~~~----i~~~t~g~ 282 (405)
+++|||.||+|++|..+++.+...|++|+.+.++... .+...+..+..|.... .|-.+ ... +.+. ..
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~--~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQR--LG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH--cC
Confidence 5789999999999999999999999999887654332 2233344445564322 23222 222 2222 24
Q ss_pred CCcEEEECCCc
Q psy2960 283 KPKLALNCVGG 293 (405)
Q Consensus 283 g~Dvvld~~g~ 293 (405)
.+|++|.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998873
No 289
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.41 E-value=0.024 Score=51.48 Aligned_cols=79 Identities=16% Similarity=0.270 Sum_probs=51.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-E--eChh---hHHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-V--FTEE---ELRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v--~~~~---d~~~-i~~~t-~g~g~ 284 (405)
.|+++||.|++|++|.+.+..+...|++|+.+.++.. +...+...+++... + .|-. +... +.+.. ...++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999999988876531 23334444555322 1 2322 2332 22221 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++++.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999999874
No 290
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.0087 Score=55.55 Aligned_cols=77 Identities=13% Similarity=0.193 Sum_probs=49.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHH-cCCcE-E--eChhh---HHH-Hhhhc-CCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADY-V--FTEEE---LRN-ISRDA-SIPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~-lg~~~-v--~~~~d---~~~-i~~~t-~g~g 283 (405)
.++++||.||+|++|.+.++.+...|++|+++.++.++ .+.+.+ .+... . .|-.+ ... +.+.. .-++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~----~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAA----RADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHH----HHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 46789999999999999999998899999998876433 222222 22211 1 23222 222 22211 1246
Q ss_pred CcEEEECCCc
Q psy2960 284 PKLALNCVGG 293 (405)
Q Consensus 284 ~Dvvld~~g~ 293 (405)
+|+++++.|.
T Consensus 79 ~d~vv~~ag~ 88 (277)
T PRK06180 79 IDVLVNNAGY 88 (277)
T ss_pred CCEEEECCCc
Confidence 8999999885
No 291
>PRK07102 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.021 Score=51.72 Aligned_cols=77 Identities=18% Similarity=0.200 Sum_probs=49.2
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE--e--Chhh---HHH-HhhhcCCCCCcE
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV--F--TEEE---LRN-ISRDASIPKPKL 286 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v--~--~~~d---~~~-i~~~t~g~g~Dv 286 (405)
.+++|.||+|++|...++.+...|++|+++.++.++.+...+.....+...+ + |-.+ ... +.+. ...+|+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~~~d~ 79 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSL--PALPDI 79 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHH--hhcCCE
Confidence 5799999999999999999999999999998765543333333333222222 1 3222 222 2222 224699
Q ss_pred EEECCCc
Q psy2960 287 ALNCVGG 293 (405)
Q Consensus 287 vld~~g~ 293 (405)
++.+.|.
T Consensus 80 vv~~ag~ 86 (243)
T PRK07102 80 VLIAVGT 86 (243)
T ss_pred EEECCcC
Confidence 9988763
No 292
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.0098 Score=54.92 Aligned_cols=78 Identities=17% Similarity=0.135 Sum_probs=51.3
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe---Ch---hhHHH-Hhhhc-CCCCCcEE
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---TE---EELRN-ISRDA-SIPKPKLA 287 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~---~~---~d~~~-i~~~t-~g~g~Dvv 287 (405)
+|||.||+|++|...+..+...|++|+.+.++.++.+...+.++..+.+..+ |- ++... +.... ...++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6999999999999999988889999999887655444444444444443322 22 22222 22211 12468999
Q ss_pred EECCCc
Q psy2960 288 LNCVGG 293 (405)
Q Consensus 288 ld~~g~ 293 (405)
|++.|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 999874
No 293
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.40 E-value=0.024 Score=53.48 Aligned_cols=81 Identities=15% Similarity=0.172 Sum_probs=51.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHHcCCcEEe---Chh---hHHH-HhhhcCCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD-DIDKLKSYLKSLGADYVF---TEE---ELRN-ISRDASIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~-~~~~~~~~~~~lg~~~v~---~~~---d~~~-i~~~t~g~g~ 284 (405)
.|.+++|.|+++++|.+.++.+...|++|+...++.+ ..+...+..+..|....+ |-. +... +.+....+.+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i 90 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL 90 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999998889999888765322 222333444444543322 222 2222 2221112479
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|++|++.|.
T Consensus 91 D~li~nAG~ 99 (306)
T PRK07792 91 DIVVNNAGI 99 (306)
T ss_pred CEEEECCCC
Confidence 999999874
No 294
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=96.38 E-value=0.067 Score=50.05 Aligned_cols=147 Identities=14% Similarity=0.175 Sum_probs=78.3
Q ss_pred CCCCCCEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHH--HHHHHhhcCCCCCCEEEEeCCCcHHHH
Q psy2960 151 SLAVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTA--YRMLKDYNSLSPGDVVIQNGANSACGQ 228 (405)
Q Consensus 151 ~~~~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta--~~al~~~~~~~~g~~VLI~ga~G~vG~ 228 (405)
.+++|++.+..+ .|.++...+....+.+.+++.|-.+. ...|. ...+.. ...+|++||-.|+ |. |.
T Consensus 105 p~~~g~~~~i~p----~w~~~~~~~~~~~i~ldpg~aFgtG~----h~tt~l~l~~l~~--~~~~g~~VLDvGc-Gs-G~ 172 (288)
T TIGR00406 105 PVQFGKRFWICP----SWRDVPSDEDALIIMLDPGLAFGTGT----HPTTSLCLEWLED--LDLKDKNVIDVGC-GS-GI 172 (288)
T ss_pred CEEEcCeEEEEC----CCcCCCCCCCcEEEEECCCCcccCCC----CHHHHHHHHHHHh--hcCCCCEEEEeCC-Ch-hH
Confidence 467788877773 24444333445667777776664421 12222 222322 2458899999998 44 88
Q ss_pred HHHHHHHHcCC-cEEEEecCCcchHHHHHHHHHcCCcE-EeChhhHHHHhhhcCCCCCcEEEECCCchhH----HHHHHh
Q psy2960 229 NVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADY-VFTEEELRNISRDASIPKPKLALNCVGGNSA----TNLLRT 302 (405)
Q Consensus 229 ~aiqla~~~G~-~v~~~~~~~~~~~~~~~~~~~lg~~~-v~~~~d~~~i~~~t~g~g~Dvvld~~g~~~~----~~~~~~ 302 (405)
.++.+++ +|+ +++++--+....+...+.+...+... +...... .... ...++|+|+........ ....+.
T Consensus 173 lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~--~~~~-~~~~fDlVvan~~~~~l~~ll~~~~~~ 248 (288)
T TIGR00406 173 LSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIY--LEQP-IEGKADVIVANILAEVIKELYPQFSRL 248 (288)
T ss_pred HHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecc--cccc-cCCCceEEEEecCHHHHHHHHHHHHHH
Confidence 8877765 576 45555333222222222232233221 1110000 1111 13479999876544332 345689
Q ss_pred cccCCEEEEEe
Q psy2960 303 LVSKGVMVTYG 313 (405)
Q Consensus 303 l~~~G~~v~~g 313 (405)
|+|+|.++..|
T Consensus 249 LkpgG~li~sg 259 (288)
T TIGR00406 249 VKPGGWLILSG 259 (288)
T ss_pred cCCCcEEEEEe
Confidence 99999998876
No 295
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.37 E-value=0.026 Score=50.36 Aligned_cols=104 Identities=20% Similarity=0.218 Sum_probs=64.2
Q ss_pred HhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCC--cEEEEecCCcchHHHHHHHHHcCCcEE-eChhhHHHHhhhcCCC
Q psy2960 206 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL--KTINIVRNRDDIDKLKSYLKSLGADYV-FTEEELRNISRDASIP 282 (405)
Q Consensus 206 ~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~--~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d~~~i~~~t~g~ 282 (405)
.+...+++|++||-.|+ |.|..++.+++..+. +|+++-.+++..+...+.+.++|.+.+ +-..|.... .....
T Consensus 70 ~~~l~~~~~~~VLDiG~--GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~--~~~~~ 145 (215)
T TIGR00080 70 TELLELKPGMKVLEIGT--GSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQG--WEPLA 145 (215)
T ss_pred HHHhCCCCcCEEEEECC--CccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccC--CcccC
Confidence 34467899999999998 568888889988764 466664444333333445556665433 111222110 11134
Q ss_pred CCcEEEECCCchhH-HHHHHhcccCCEEEEEe
Q psy2960 283 KPKLALNCVGGNSA-TNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 283 g~Dvvld~~g~~~~-~~~~~~l~~~G~~v~~g 313 (405)
.+|+|+-+...... ....+.|+++|+++..-
T Consensus 146 ~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~~ 177 (215)
T TIGR00080 146 PYDRIYVTAAGPKIPEALIDQLKEGGILVMPV 177 (215)
T ss_pred CCCEEEEcCCcccccHHHHHhcCcCcEEEEEE
Confidence 79988855444433 45679999999988753
No 296
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.36 E-value=0.13 Score=45.30 Aligned_cols=92 Identities=10% Similarity=0.166 Sum_probs=58.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 292 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g 292 (405)
.|.+|||.|+ |.+|...+..+...|++++++.. +..++..+.+.. +. ..+..+.+.. ..-.++|+||-|++
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~--~~~~~l~~l~~~-~~-i~~~~~~~~~----~~l~~adlViaaT~ 79 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISP--ELTENLVKLVEE-GK-IRWKQKEFEP----SDIVDAFLVIAATN 79 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcC--CCCHHHHHHHhC-CC-EEEEecCCCh----hhcCCceEEEEcCC
Confidence 5789999999 99999999888889998887752 322333333333 21 1122222221 01246899999999
Q ss_pred chhHHHHHHhcccCCEEEEEe
Q psy2960 293 GNSATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 293 ~~~~~~~~~~l~~~G~~v~~g 313 (405)
.+.....+...+..+.++...
T Consensus 80 d~elN~~i~~~a~~~~lvn~~ 100 (202)
T PRK06718 80 DPRVNEQVKEDLPENALFNVI 100 (202)
T ss_pred CHHHHHHHHHHHHhCCcEEEC
Confidence 988876654333445566554
No 297
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.02 Score=53.02 Aligned_cols=81 Identities=10% Similarity=0.172 Sum_probs=51.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcch-------HHHHHHHHHcCCcEE---eChhh---HHH-Hhhh
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDI-------DKLKSYLKSLGADYV---FTEEE---LRN-ISRD 278 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~-------~~~~~~~~~lg~~~v---~~~~d---~~~-i~~~ 278 (405)
.|.++||.||+|++|...+..+...|++++++.++.+.. ++..+..+..+.... .|..+ ... +.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 568999999999999999999888999999988765421 111222334444322 23222 222 2221
Q ss_pred c-CCCCCcEEEECCCc
Q psy2960 279 A-SIPKPKLALNCVGG 293 (405)
Q Consensus 279 t-~g~g~Dvvld~~g~ 293 (405)
. ..+.+|++|++.|.
T Consensus 85 ~~~~g~id~li~~ag~ 100 (273)
T PRK08278 85 VERFGGIDICVNNASA 100 (273)
T ss_pred HHHhCCCCEEEECCCC
Confidence 1 12369999999874
No 298
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.35 E-value=0.026 Score=50.87 Aligned_cols=77 Identities=13% Similarity=0.060 Sum_probs=50.7
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eCh---hhHHH-HhhhcC-CCCCcEE
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTE---EELRN-ISRDAS-IPKPKLA 287 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~---~d~~~-i~~~t~-g~g~Dvv 287 (405)
++++||.|++|++|.+.++.+...|++|+.+.++.+.. .+..+..|...+ .|- ++... +.+... ..++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPA---IDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhH---HHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEE
Confidence 46899999999999999999989999999987665432 333444554322 232 22222 222211 2468999
Q ss_pred EECCCc
Q psy2960 288 LNCVGG 293 (405)
Q Consensus 288 ld~~g~ 293 (405)
+++.|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 999873
No 299
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.014 Score=53.30 Aligned_cols=80 Identities=13% Similarity=0.102 Sum_probs=48.4
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eChhh---HHH-Hhhh-cCCCCCcEE
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEE---LRN-ISRD-ASIPKPKLA 287 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d---~~~-i~~~-t~g~g~Dvv 287 (405)
+.++||.|++|++|...+..+...|++++.+.++.+..+...+...+-....+ .|..+ ... +.+. ...+++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 56899999999999999998888999998888665432222222211112111 23222 222 2221 112468999
Q ss_pred EECCCc
Q psy2960 288 LNCVGG 293 (405)
Q Consensus 288 ld~~g~ 293 (405)
+.+.|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999974
No 300
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.014 Score=53.31 Aligned_cols=76 Identities=13% Similarity=0.140 Sum_probs=49.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCc-EEeChhhHHHHhhhcCCCCCcEEEECC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD-YVFTEEELRNISRDASIPKPKLALNCV 291 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~-~v~~~~d~~~i~~~t~g~g~Dvvld~~ 291 (405)
.|++++|.||+|++|.+.++.+...|++|+.+.++.... .+........ ...|-.+.+++.+.. .++|+++++.
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~--~~iDilVnnA 87 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINN---SESNDESPNEWIKWECGKEESLDKQL--ASLDVLILNH 87 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhh---hhhhccCCCeEEEeeCCCHHHHHHhc--CCCCEEEECC
Confidence 478999999999999999999999999999887654211 1111111111 123433433333332 3589999999
Q ss_pred Cc
Q psy2960 292 GG 293 (405)
Q Consensus 292 g~ 293 (405)
|.
T Consensus 88 G~ 89 (245)
T PRK12367 88 GI 89 (245)
T ss_pred cc
Confidence 74
No 301
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.0095 Score=54.37 Aligned_cols=37 Identities=22% Similarity=0.393 Sum_probs=32.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 249 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~ 249 (405)
.|.+|||.||+|++|...++.+...|++|+.+.++.+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~ 50 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED 50 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4789999999999999999999899999988876543
No 302
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.34 E-value=0.039 Score=48.85 Aligned_cols=102 Identities=15% Similarity=0.118 Sum_probs=64.0
Q ss_pred hhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcC--CcEEEEecCCcchHHHHHHHHHcCCcE-E-eChhhHHH-HhhhcCC
Q psy2960 207 DYNSLSPGDVVIQNGANSACGQNVIQIARHWG--LKTINIVRNRDDIDKLKSYLKSLGADY-V-FTEEELRN-ISRDASI 281 (405)
Q Consensus 207 ~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G--~~v~~~~~~~~~~~~~~~~~~~lg~~~-v-~~~~d~~~-i~~~t~g 281 (405)
+...+++|++||=.|+ |.|..++.+++..+ .+++++-.+++..+...+.+...|... + +...|..+ +. ..
T Consensus 66 ~~l~~~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~---~~ 140 (205)
T PRK13944 66 ELIEPRPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLE---KH 140 (205)
T ss_pred HhcCCCCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCc---cC
Confidence 4467889999999998 56888888888874 567776544433332334444555421 1 11222222 21 13
Q ss_pred CCCcEEEECCCchhH-HHHHHhcccCCEEEEEe
Q psy2960 282 PKPKLALNCVGGNSA-TNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 282 ~g~Dvvld~~g~~~~-~~~~~~l~~~G~~v~~g 313 (405)
..+|+|+-+...... ...++.|++||+++..-
T Consensus 141 ~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~~ 173 (205)
T PRK13944 141 APFDAIIVTAAASTIPSALVRQLKDGGVLVIPV 173 (205)
T ss_pred CCccEEEEccCcchhhHHHHHhcCcCcEEEEEE
Confidence 479998876665444 45679999999997643
No 303
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.32 E-value=0.013 Score=57.31 Aligned_cols=76 Identities=17% Similarity=0.225 Sum_probs=49.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcC--CcEE-eChhhHHHHhhhcCCCCCcEEEE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLG--ADYV-FTEEELRNISRDASIPKPKLALN 289 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg--~~~v-~~~~d~~~i~~~t~g~g~Dvvld 289 (405)
.|++|+|.||+|++|.+.+..+...|++|+++.++.++.+ +.....+ ...+ .|..|.+++.+.. .++|++|+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~---~~~~~~~~~v~~v~~Dvsd~~~v~~~l--~~IDiLIn 251 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKIT---LEINGEDLPVKTLHWQVGQEAALAELL--EKVDILII 251 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHhhcCCCeEEEEeeCCCHHHHHHHh--CCCCEEEE
Confidence 4789999999999999999988889999998876543221 1121111 1111 2334433333332 36899999
Q ss_pred CCCc
Q psy2960 290 CVGG 293 (405)
Q Consensus 290 ~~g~ 293 (405)
+.|.
T Consensus 252 nAGi 255 (406)
T PRK07424 252 NHGI 255 (406)
T ss_pred CCCc
Confidence 8873
No 304
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.31 E-value=0.037 Score=54.66 Aligned_cols=143 Identities=15% Similarity=0.217 Sum_probs=88.2
Q ss_pred CCCccceEEEEEEEcCCCCCCCCCCEEEec-C---------------CCCCcccceEeecccceEE---c-CCCCChhhh
Q psy2960 132 AVPGFEGVGEVVEVGSDVSSLAVGDHVIPD-T---------------QHLGTWRNYGKFNHDVLMK---V-PKDIALTEI 191 (405)
Q Consensus 132 ~~lG~E~~G~V~~vG~~v~~~~~GdrV~~~-~---------------~~~G~~a~~~~v~~~~~~~---i-P~~~s~~~A 191 (405)
..-|.|+++.+.+|+++++..-+|+.-+.- . ..++.|++++.+.. .+.. + +..+|...+
T Consensus 88 ~~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~ 166 (417)
T TIGR01035 88 ILTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISSA 166 (417)
T ss_pred hcCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHH
Confidence 357889999999999998875555543310 0 11357888887765 3222 3 222332222
Q ss_pred ccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHHcCCcEEeChh
Q psy2960 192 SGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEE 270 (405)
Q Consensus 192 a~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~-~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~ 270 (405)
| .-.+. +..+..+|++|+|.|+ |.+|..+++.++..|+ +++++.++.+ ...+.+..+|.. .++.+
T Consensus 167 A--------v~la~-~~~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~---ra~~la~~~g~~-~i~~~ 232 (417)
T TIGR01035 167 A--------VELAE-RIFGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYE---RAEDLAKELGGE-AVKFE 232 (417)
T ss_pred H--------HHHHH-HHhCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHH---HHHHHHHHcCCe-EeeHH
Confidence 1 11122 2234457899999999 9999999999999995 4555544322 223466677764 34444
Q ss_pred hHHH-HhhhcCCCCCcEEEECCCchh
Q psy2960 271 ELRN-ISRDASIPKPKLALNCVGGNS 295 (405)
Q Consensus 271 d~~~-i~~~t~g~g~Dvvld~~g~~~ 295 (405)
+..+ + .++|+||+|++.+.
T Consensus 233 ~l~~~l------~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 233 DLEEYL------AEADIVISSTGAPH 252 (417)
T ss_pred HHHHHH------hhCCEEEECCCCCC
Confidence 4433 3 25799999998654
No 305
>PLN02253 xanthoxin dehydrogenase
Probab=96.31 E-value=0.016 Score=53.86 Aligned_cols=37 Identities=19% Similarity=0.392 Sum_probs=32.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 249 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~ 249 (405)
.|.++||.|++|++|.+.++.+...|++|+.+.++.+
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~ 53 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDD 53 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 4789999999999999999988889999988876543
No 306
>KOG0725|consensus
Probab=96.30 E-value=0.028 Score=51.98 Aligned_cols=82 Identities=18% Similarity=0.289 Sum_probs=55.2
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCc---E---EeCh---hhHHH-Hhhhc-C
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD---Y---VFTE---EELRN-ISRDA-S 280 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~---~---v~~~---~d~~~-i~~~t-~ 280 (405)
-.|..++|.|++.|+|.+.+..+...|++|+++.++.+..++........+.. . +.|- ++.++ +.... .
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999998776544444444444442 1 1222 22222 21111 1
Q ss_pred -CCCCcEEEECCCc
Q psy2960 281 -IPKPKLALNCVGG 293 (405)
Q Consensus 281 -g~g~Dvvld~~g~ 293 (405)
.+.+|++++..|.
T Consensus 86 ~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 86 FFGKIDILVNNAGA 99 (270)
T ss_pred hCCCCCEEEEcCCc
Confidence 3568999998874
No 307
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.29 E-value=0.016 Score=55.77 Aligned_cols=92 Identities=12% Similarity=0.067 Sum_probs=60.0
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcC-CcEEEEecCCcchHHHHHHHHHcC---C-cEEeChhhHHHHhhhcCCCCCcEEEE
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWG-LKTINIVRNRDDIDKLKSYLKSLG---A-DYVFTEEELRNISRDASIPKPKLALN 289 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G-~~v~~~~~~~~~~~~~~~~~~~lg---~-~~v~~~~d~~~i~~~t~g~g~Dvvld 289 (405)
.+|||.|+ |+||+.+++.+...| .+|+++.++.++. +.+.... . ...+|-.|.+.+.++. .++|+||+
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~----~~i~~~~~~~v~~~~vD~~d~~al~~li--~~~d~VIn 74 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKC----ARIAELIGGKVEALQVDAADVDALVALI--KDFDLVIN 74 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHH----HHHHhhccccceeEEecccChHHHHHHH--hcCCEEEE
Confidence 47999999 999999999988888 7888888776653 2232222 2 2334554544322222 24599999
Q ss_pred CCCchhHHHHH-HhcccCCEEEEEe
Q psy2960 290 CVGGNSATNLL-RTLVSKGVMVTYG 313 (405)
Q Consensus 290 ~~g~~~~~~~~-~~l~~~G~~v~~g 313 (405)
|.+.......+ .|++.+=.++.+.
T Consensus 75 ~~p~~~~~~i~ka~i~~gv~yvDts 99 (389)
T COG1748 75 AAPPFVDLTILKACIKTGVDYVDTS 99 (389)
T ss_pred eCCchhhHHHHHHHHHhCCCEEEcc
Confidence 99987766666 4444444555554
No 308
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.27 E-value=0.045 Score=50.63 Aligned_cols=96 Identities=13% Similarity=0.193 Sum_probs=68.6
Q ss_pred ccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh
Q psy2960 192 SGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE 271 (405)
Q Consensus 192 a~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d 271 (405)
..+||+....+..+....---.|.+|+|.|.+.-+|.-++.++...||+|+++-+.. .+
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t---------------------~~ 194 (286)
T PRK14175 136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS---------------------KD 194 (286)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc---------------------hh
Confidence 456777776666665532224799999999976699999999999999988775321 11
Q ss_pred HHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEEecc
Q psy2960 272 LRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGM 315 (405)
Q Consensus 272 ~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~~ 315 (405)
..+ + +..|+||.++|.+.+... +.++++-.++.+|..
T Consensus 195 l~~~~------~~ADIVIsAvg~p~~i~~-~~vk~gavVIDvGi~ 232 (286)
T PRK14175 195 MASYL------KDADVIVSAVGKPGLVTK-DVVKEGAVIIDVGNT 232 (286)
T ss_pred HHHHH------hhCCEEEECCCCCcccCH-HHcCCCcEEEEcCCC
Confidence 122 2 246999999998755332 568888888888843
No 309
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=96.24 E-value=0.042 Score=47.10 Aligned_cols=100 Identities=21% Similarity=0.270 Sum_probs=68.0
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHc-CCcEEEEecCCcchHHHHHHHHHcCCcEEeChh-hHHH-HhhhcCCCCCc
Q psy2960 209 NSLSPGDVVIQNGANSACGQNVIQIARHW-GLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE-ELRN-ISRDASIPKPK 285 (405)
Q Consensus 209 ~~~~~g~~VLI~ga~G~vG~~aiqla~~~-G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~-d~~~-i~~~t~g~g~D 285 (405)
..++||+.++=.|+ |.|..++++|+.. .++++++-++++..+.....+.++|.+.+.--+ +..+ +.++ ..+|
T Consensus 30 L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~---~~~d 104 (187)
T COG2242 30 LRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDL---PSPD 104 (187)
T ss_pred hCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCC---CCCC
Confidence 57899998888888 5688889999544 568888876655555556667788987553221 2222 3322 2689
Q ss_pred EEEECCCc---hhHHHHHHhcccCCEEEEEe
Q psy2960 286 LALNCVGG---NSATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 286 vvld~~g~---~~~~~~~~~l~~~G~~v~~g 313 (405)
.+|---|+ +.++.++..|+++|++|.-.
T Consensus 105 aiFIGGg~~i~~ile~~~~~l~~ggrlV~na 135 (187)
T COG2242 105 AIFIGGGGNIEEILEAAWERLKPGGRLVANA 135 (187)
T ss_pred EEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence 98865443 23456789999999998743
No 310
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.23 E-value=0.042 Score=49.47 Aligned_cols=90 Identities=18% Similarity=0.271 Sum_probs=62.5
Q ss_pred EEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe-ChhhHHHHhhhcCCCCCcEEEECCCc--
Q psy2960 217 VIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRNISRDASIPKPKLALNCVGG-- 293 (405)
Q Consensus 217 VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~-~~~d~~~i~~~t~g~g~Dvvld~~g~-- 293 (405)
|+|.|++|.+|...++.+...+.+|.+.+++.. ..+.+.++..|+..+. |..|.+.+.+.. .|+|.||.+++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~--~~~~~~l~~~g~~vv~~d~~~~~~l~~al--~g~d~v~~~~~~~~ 76 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS--SDRAQQLQALGAEVVEADYDDPESLVAAL--KGVDAVFSVTPPSH 76 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH--HHHHHHHHHTTTEEEES-TT-HHHHHHHH--TTCSEEEEESSCSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc--hhhhhhhhcccceEeecccCCHHHHHHHH--cCCceEEeecCcch
Confidence 799999999999999999999999999998752 3446667788997653 444444444442 489999999883
Q ss_pred -hhH---HHHHHhcccCC--EEE
Q psy2960 294 -NSA---TNLLRTLVSKG--VMV 310 (405)
Q Consensus 294 -~~~---~~~~~~l~~~G--~~v 310 (405)
... ...+++..+-| +|+
T Consensus 77 ~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 77 PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred hhhhhhhhhHHHhhhccccceEE
Confidence 222 23455555544 444
No 311
>PRK12746 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.038 Score=50.29 Aligned_cols=81 Identities=16% Similarity=0.209 Sum_probs=48.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEe-cCCcchHHHHHHHHHcCCcE-Ee--Chhh---HHH-Hhhh---c--
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIV-RNRDDIDKLKSYLKSLGADY-VF--TEEE---LRN-ISRD---A-- 279 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~-~~~~~~~~~~~~~~~lg~~~-v~--~~~d---~~~-i~~~---t-- 279 (405)
.+.+++|.|++|++|...++.+...|+++++.. ++.++.+...+.....+... ++ |-.| +.. +.+. .
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 467999999999999999999888999987754 43332222222333333221 12 3222 222 2222 1
Q ss_pred --CCCCCcEEEECCCc
Q psy2960 280 --SIPKPKLALNCVGG 293 (405)
Q Consensus 280 --~g~g~Dvvld~~g~ 293 (405)
+..++|++|.+.|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 12468999999874
No 312
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.18 E-value=0.036 Score=50.59 Aligned_cols=99 Identities=14% Similarity=0.139 Sum_probs=60.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHH-cCCcEE-eChhh-HHHHhhhcCCCCCcEEEE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADYV-FTEEE-LRNISRDASIPKPKLALN 289 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~-lg~~~v-~~~~d-~~~i~~~t~g~g~Dvvld 289 (405)
.+.+|||.||+|.+|...++.+...|++|++++++.+... ..... .++..+ .|..+ ...+.+.. +.++|+||.
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~l~~~~-~~~~d~vi~ 91 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAK---TSLPQDPSLQIVRADVTEGSDKLVEAI-GDDSDAVIC 91 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHH---HhcccCCceEEEEeeCCCCHHHHHHHh-hcCCCEEEE
Confidence 4679999999999999999988888999998887643211 11111 123222 24333 22232221 236899999
Q ss_pred CCCchh--------------HHHHHHhccc--CCEEEEEecc
Q psy2960 290 CVGGNS--------------ATNLLRTLVS--KGVMVTYGGM 315 (405)
Q Consensus 290 ~~g~~~--------------~~~~~~~l~~--~G~~v~~g~~ 315 (405)
+.|... ....++.+.. .++++.++..
T Consensus 92 ~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 92 ATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 877421 1233444443 3688888754
No 313
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.037 Score=50.18 Aligned_cols=79 Identities=16% Similarity=0.188 Sum_probs=49.4
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHc--CCc-EE--eChhh---HHH-Hhhhc-CCCC
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL--GAD-YV--FTEEE---LRN-ISRDA-SIPK 283 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~l--g~~-~v--~~~~d---~~~-i~~~t-~g~g 283 (405)
+.++||.|++|++|...++.+...|++++.+.++.+..+.....+.+. +.. ++ .|..+ ... +.+.. ...+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 568999999999999999888888999988877654433322322222 221 11 23322 222 22221 1346
Q ss_pred CcEEEECCC
Q psy2960 284 PKLALNCVG 292 (405)
Q Consensus 284 ~Dvvld~~g 292 (405)
+|+++++.|
T Consensus 82 id~vi~~ag 90 (248)
T PRK08251 82 LDRVIVNAG 90 (248)
T ss_pred CCEEEECCC
Confidence 899999987
No 314
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.16 E-value=0.043 Score=50.08 Aligned_cols=79 Identities=16% Similarity=0.241 Sum_probs=50.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eCh---hhHHH-Hhhh-cCCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTE---EELRN-ISRD-ASIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~---~d~~~-i~~~-t~g~g~ 284 (405)
.|.++||.|++|++|.+.++.+...|++|+.+.++. . +...+.+.+++.+.. .|- ++... +.+. .....+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~-~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE-P-TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc-h-HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999999999998764332 2 233344445553221 232 22332 2222 113468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++++.|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999999974
No 315
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.16 E-value=0.057 Score=50.51 Aligned_cols=77 Identities=12% Similarity=0.137 Sum_probs=45.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCC---cchHHHHHHHHHcCCc---EEeChhhHHHHhhhcCCCCCc
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNR---DDIDKLKSYLKSLGAD---YVFTEEELRNISRDASIPKPK 285 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~---~~~~~~~~~~~~lg~~---~v~~~~d~~~i~~~t~g~g~D 285 (405)
.+++++|.|+ ||+|.+++..+...|++ ++++.++. ++.++..+.+.+.+.. ...+.++...+.+. -..+|
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~--~~~~D 201 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAE--IASSD 201 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhh--hccCC
Confidence 5789999999 89999999888899997 66665554 2222222222222221 11233332222222 12469
Q ss_pred EEEECCC
Q psy2960 286 LALNCVG 292 (405)
Q Consensus 286 vvld~~g 292 (405)
+++||+.
T Consensus 202 ilINaTp 208 (289)
T PRK12548 202 ILVNATL 208 (289)
T ss_pred EEEEeCC
Confidence 9999885
No 316
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.14 E-value=0.035 Score=50.45 Aligned_cols=80 Identities=15% Similarity=0.175 Sum_probs=50.8
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eCh---hhHHH-Hhhhc-CCCCCc
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTE---EELRN-ISRDA-SIPKPK 285 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~---~d~~~-i~~~t-~g~g~D 285 (405)
+.++||.|++|++|...+..+...|++|+++.++.+..+...+.....+.... .|. ++... +.+.. ...++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 35899999999999999999888999999988765443333333333343211 232 22222 22211 134689
Q ss_pred EEEECCCc
Q psy2960 286 LALNCVGG 293 (405)
Q Consensus 286 vvld~~g~ 293 (405)
+||.+.|.
T Consensus 81 ~vi~~a~~ 88 (255)
T TIGR01963 81 ILVNNAGI 88 (255)
T ss_pred EEEECCCC
Confidence 99988763
No 317
>PRK09135 pteridine reductase; Provisional
Probab=96.14 E-value=0.027 Score=50.94 Aligned_cols=80 Identities=14% Similarity=0.144 Sum_probs=49.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcch-HHHHHHHHHcCC-c-EE--eChhh---HHH-Hhhh-cCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDI-DKLKSYLKSLGA-D-YV--FTEEE---LRN-ISRD-ASIP 282 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~-~~~~~~~~~lg~-~-~v--~~~~d---~~~-i~~~-t~g~ 282 (405)
.+.+|||.|++|++|..++......|++|+++.++.+.. ++....+..... . .+ .|-.+ ... +.+. ....
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 467999999999999999999888999999998654321 222222222221 1 11 23333 222 2211 1124
Q ss_pred CCcEEEECCC
Q psy2960 283 KPKLALNCVG 292 (405)
Q Consensus 283 g~Dvvld~~g 292 (405)
++|+||.+.|
T Consensus 85 ~~d~vi~~ag 94 (249)
T PRK09135 85 RLDALVNNAS 94 (249)
T ss_pred CCCEEEECCC
Confidence 6899999997
No 318
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=96.13 E-value=0.03 Score=50.73 Aligned_cols=81 Identities=17% Similarity=0.226 Sum_probs=50.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHHcCCcEE-e--Chhh---HHH-HhhhcC-CCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR-DDIDKLKSYLKSLGADYV-F--TEEE---LRN-ISRDAS-IPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~-~~~~~~~~~~~~lg~~~v-~--~~~d---~~~-i~~~t~-g~g 283 (405)
.+.+++|.|++|++|...+..+...|++++++.+.. +..++..+.+++.+.+.. + |-.+ ... +.+... -..
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999998888999998765432 222233344444444322 1 2222 222 222211 245
Q ss_pred CcEEEECCCc
Q psy2960 284 PKLALNCVGG 293 (405)
Q Consensus 284 ~Dvvld~~g~ 293 (405)
+|+++.+.|.
T Consensus 85 id~vi~~ag~ 94 (247)
T PRK12935 85 VDILVNNAGI 94 (247)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 319
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.13 E-value=0.021 Score=60.06 Aligned_cols=117 Identities=11% Similarity=0.116 Sum_probs=73.8
Q ss_pred CcccceEeecccceEEcCCCCChhhhccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEe
Q psy2960 166 GTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIV 245 (405)
Q Consensus 166 G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~ 245 (405)
-+..+|.-+++...+.+ +.|++|+|-.-..+ . ..--.|++|||.|++|++|.+.++.+...|++|+++.
T Consensus 377 ~~~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~---------~-~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~ 445 (676)
T TIGR02632 377 EAVSEYVSLPEQEAFDI-EYWPLEEAKLRRMP---------K-EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLAD 445 (676)
T ss_pred hcccceecCchhhccch-hhhhhhHHhhccCC---------C-CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEe
Confidence 35577888888888888 88988887442111 0 1112478999999999999999999989999999887
Q ss_pred cCCcchHHHHHHHH-HcCCcEE----eCh---hhHHH-Hhhhc-CCCCCcEEEECCCc
Q psy2960 246 RNRDDIDKLKSYLK-SLGADYV----FTE---EELRN-ISRDA-SIPKPKLALNCVGG 293 (405)
Q Consensus 246 ~~~~~~~~~~~~~~-~lg~~~v----~~~---~d~~~-i~~~t-~g~g~Dvvld~~g~ 293 (405)
++.+..+...+.+. ..+...+ .|- ++... +.+.. ..+++|+++++.|.
T Consensus 446 r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 446 LNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred CCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 66543222222222 1232111 232 22222 22211 13479999999984
No 320
>PLN02240 UDP-glucose 4-epimerase
Probab=96.12 E-value=0.069 Score=51.28 Aligned_cols=81 Identities=12% Similarity=0.153 Sum_probs=48.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHH----cC--CcEE-eChhhHHHHhhhcCCCCCc
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS----LG--ADYV-FTEEELRNISRDASIPKPK 285 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~----lg--~~~v-~~~~d~~~i~~~t~g~g~D 285 (405)
.+.+|||.||+|.+|...++.+...|.+|+++.+.........+.... .+ ...+ .|-.+...+.+.....++|
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d 83 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFD 83 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCC
Confidence 367999999999999999999888999998886433221111111211 11 2222 2333332233322234789
Q ss_pred EEEECCCc
Q psy2960 286 LALNCVGG 293 (405)
Q Consensus 286 vvld~~g~ 293 (405)
+|+++.+.
T Consensus 84 ~vih~a~~ 91 (352)
T PLN02240 84 AVIHFAGL 91 (352)
T ss_pred EEEEcccc
Confidence 99999863
No 321
>PRK05599 hypothetical protein; Provisional
Probab=96.11 E-value=0.029 Score=51.05 Aligned_cols=77 Identities=18% Similarity=0.238 Sum_probs=49.4
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE--Ee--Chhh---HHH-Hhhhc-CCCCCcE
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY--VF--TEEE---LRN-ISRDA-SIPKPKL 286 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~--v~--~~~d---~~~-i~~~t-~g~g~Dv 286 (405)
+++|.|+++|+|.+.+.... .|++|+.+.++.++.++..+.+++.|.+. .+ |-.| ... +.+.. ..+++|+
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 80 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL 80 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence 68999999999999888765 59999998877655444445555555432 22 3222 222 22211 1246899
Q ss_pred EEECCCc
Q psy2960 287 ALNCVGG 293 (405)
Q Consensus 287 vld~~g~ 293 (405)
++++.|.
T Consensus 81 lv~nag~ 87 (246)
T PRK05599 81 AVVAFGI 87 (246)
T ss_pred EEEecCc
Confidence 9998874
No 322
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.11 E-value=0.21 Score=44.09 Aligned_cols=92 Identities=12% Similarity=0.091 Sum_probs=59.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 292 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g 292 (405)
.|.+|||.|+ |.+|...++.+...|++|+++... ..++..+.. +.|.-..+ .+++.. .. -.++|+|+-+++
T Consensus 8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~--~~~~l~~l~-~~~~i~~~-~~~~~~-~d---l~~~~lVi~at~ 78 (205)
T TIGR01470 8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEE--LESELTLLA-EQGGITWL-ARCFDA-DI---LEGAFLVIAATD 78 (205)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCC--CCHHHHHHH-HcCCEEEE-eCCCCH-HH---hCCcEEEEECCC
Confidence 4789999999 999999999999999998877532 223333333 33321111 122211 00 246899999999
Q ss_pred chhHHH-HHHhcccCCEEEEEe
Q psy2960 293 GNSATN-LLRTLVSKGVMVTYG 313 (405)
Q Consensus 293 ~~~~~~-~~~~l~~~G~~v~~g 313 (405)
.+.... .....+..|..+.+.
T Consensus 79 d~~ln~~i~~~a~~~~ilvn~~ 100 (205)
T TIGR01470 79 DEELNRRVAHAARARGVPVNVV 100 (205)
T ss_pred CHHHHHHHHHHHHHcCCEEEEC
Confidence 876654 456666778777654
No 323
>PRK07069 short chain dehydrogenase; Validated
Probab=96.11 E-value=0.057 Score=48.98 Aligned_cols=78 Identities=14% Similarity=0.190 Sum_probs=47.5
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecC-CcchHHHHHHHHHc-CCcEE----eChhh---HHH-Hhhhc-CCCCC
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRN-RDDIDKLKSYLKSL-GADYV----FTEEE---LRN-ISRDA-SIPKP 284 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~-~~~~~~~~~~~~~l-g~~~v----~~~~d---~~~-i~~~t-~g~g~ 284 (405)
+++|.|++|++|...++.+...|++|+.+.++ .+..+...+.++.. +...+ .|-.+ ... +.+.. .-+++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 38999999999999999998899999988866 33322222333322 22111 23222 222 22211 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++.+.|.
T Consensus 81 d~vi~~ag~ 89 (251)
T PRK07069 81 SVLVNNAGV 89 (251)
T ss_pred cEEEECCCc
Confidence 999999873
No 324
>PRK09134 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.032 Score=51.05 Aligned_cols=81 Identities=15% Similarity=0.204 Sum_probs=50.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHHcCCcE-E--eChhh---HHH-Hhhhc-CCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-IDKLKSYLKSLGADY-V--FTEEE---LRN-ISRDA-SIPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~-~~~~~~~~~~lg~~~-v--~~~~d---~~~-i~~~t-~g~g 283 (405)
.+.++||.|++|++|...++.+...|++++.+.+..+. .+...+..+..+... + .|-.| ... +.+.. ...+
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46799999999999999999888999999887754322 122222333334422 1 23222 222 22211 1246
Q ss_pred CcEEEECCCc
Q psy2960 284 PKLALNCVGG 293 (405)
Q Consensus 284 ~Dvvld~~g~ 293 (405)
+|++|.+.|.
T Consensus 88 iD~vi~~ag~ 97 (258)
T PRK09134 88 ITLLVNNASL 97 (258)
T ss_pred CCEEEECCcC
Confidence 8999999873
No 325
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.10 E-value=0.031 Score=51.34 Aligned_cols=80 Identities=14% Similarity=0.210 Sum_probs=48.7
Q ss_pred CCCEEEEeCC--CcHHHHHHHHHHHHcCCcEEEEecCCcchHHHH-HHHHHcCCcEEe--Ch---hhHHH-Hhhhc-CCC
Q psy2960 213 PGDVVIQNGA--NSACGQNVIQIARHWGLKTINIVRNRDDIDKLK-SYLKSLGADYVF--TE---EELRN-ISRDA-SIP 282 (405)
Q Consensus 213 ~g~~VLI~ga--~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~-~~~~~lg~~~v~--~~---~d~~~-i~~~t-~g~ 282 (405)
.|+++||.|| ++++|.++++.+...|++|+.+.+. +..++++ +...+++....+ |- ++... +.+.. ..+
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVG-DRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccc-hHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 5789999996 5799999999988899999876432 1112222 233344533222 32 22333 22221 125
Q ss_pred CCcEEEECCCc
Q psy2960 283 KPKLALNCVGG 293 (405)
Q Consensus 283 g~Dvvld~~g~ 293 (405)
.+|+++++.|.
T Consensus 84 ~iD~lvnnAG~ 94 (260)
T PRK06997 84 GLDGLVHSIGF 94 (260)
T ss_pred CCcEEEEcccc
Confidence 79999998863
No 326
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.10 E-value=0.026 Score=56.95 Aligned_cols=73 Identities=19% Similarity=0.245 Sum_probs=51.6
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHH-HhhhcCCCCCcEEE
Q psy2960 210 SLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKLAL 288 (405)
Q Consensus 210 ~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~-i~~~t~g~g~Dvvl 288 (405)
.+.+|++|+|.|. |..|++++++++..|++|++.-.. +.+.+.++++|...+ ......+ + ..+|+|+
T Consensus 8 ~~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~----~~~~~~l~~~g~~~~-~~~~~~~~l------~~~D~VV 75 (488)
T PRK03369 8 PLLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDD----PDALRPHAERGVATV-STSDAVQQI------ADYALVV 75 (488)
T ss_pred cccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCC----HHHHHHHHhCCCEEE-cCcchHhHh------hcCCEEE
Confidence 4568999999999 999999999999999998885422 223445667787543 2221112 2 2469999
Q ss_pred ECCCch
Q psy2960 289 NCVGGN 294 (405)
Q Consensus 289 d~~g~~ 294 (405)
.+.|-+
T Consensus 76 ~SpGi~ 81 (488)
T PRK03369 76 TSPGFR 81 (488)
T ss_pred ECCCCC
Confidence 999864
No 327
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.07 E-value=0.043 Score=50.55 Aligned_cols=79 Identities=18% Similarity=0.270 Sum_probs=48.6
Q ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHH-HcCCcEEe--C---hhhHHH-HhhhcC-CC
Q psy2960 213 PGDVVIQNGANS--ACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK-SLGADYVF--T---EEELRN-ISRDAS-IP 282 (405)
Q Consensus 213 ~g~~VLI~ga~G--~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~-~lg~~~v~--~---~~d~~~-i~~~t~-g~ 282 (405)
.|+++||.||++ |+|.++++.+...|++++.+.++ ++.+...+.+. +.+....+ | .++... +.+... .+
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 578999999975 89999999988899998877654 22222233332 23322222 3 223333 322221 24
Q ss_pred CCcEEEECCC
Q psy2960 283 KPKLALNCVG 292 (405)
Q Consensus 283 g~Dvvld~~g 292 (405)
.+|+++++.|
T Consensus 84 ~iD~linnAg 93 (262)
T PRK07984 84 KFDGFVHSIG 93 (262)
T ss_pred CCCEEEECCc
Confidence 6899999997
No 328
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=96.05 E-value=0.084 Score=49.72 Aligned_cols=31 Identities=13% Similarity=0.216 Sum_probs=29.3
Q ss_pred CCCEEEEeCC--CcHHHHHHHHHHHHcCCcEEE
Q psy2960 213 PGDVVIQNGA--NSACGQNVIQIARHWGLKTIN 243 (405)
Q Consensus 213 ~g~~VLI~ga--~G~vG~~aiqla~~~G~~v~~ 243 (405)
.|+++||.|+ +.|+|.++++.+...|++|+.
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~ 40 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV 40 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE
Confidence 5899999999 799999999999999999988
No 329
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=96.03 E-value=0.045 Score=49.33 Aligned_cols=79 Identities=13% Similarity=0.160 Sum_probs=47.6
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHHcCCcE-E--eChh---hHHH-Hhhhc-CCCCCc
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD-DIDKLKSYLKSLGADY-V--FTEE---ELRN-ISRDA-SIPKPK 285 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~-~~~~~~~~~~~lg~~~-v--~~~~---d~~~-i~~~t-~g~g~D 285 (405)
+++||+|++|++|...+..+...|++++++.++.. ..++..+.....+... + .|.. +... +.+.. ....+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 47899999999999999999999999998886322 2222222222223221 1 1222 2222 22211 134689
Q ss_pred EEEECCCc
Q psy2960 286 LALNCVGG 293 (405)
Q Consensus 286 vvld~~g~ 293 (405)
+||.+.|.
T Consensus 81 ~vi~~ag~ 88 (242)
T TIGR01829 81 VLVNNAGI 88 (242)
T ss_pred EEEECCCC
Confidence 99999873
No 330
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.03 E-value=0.051 Score=49.61 Aligned_cols=78 Identities=13% Similarity=0.190 Sum_probs=49.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eCh---hhHHH-Hhhhc-CCCCCcE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTE---EELRN-ISRDA-SIPKPKL 286 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~---~d~~~-i~~~t-~g~g~Dv 286 (405)
.|.+++|.|++|++|.+.++.+...|++|+.+.++.+. ..+.++..+...+ .|- ++... +.+.. ..+++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~---~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAEN---EAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHH---HHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 47899999999999999999999999999877654332 2233333333222 232 22222 22221 1246899
Q ss_pred EEECCCc
Q psy2960 287 ALNCVGG 293 (405)
Q Consensus 287 vld~~g~ 293 (405)
+|+|.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9999874
No 331
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.052 Score=49.71 Aligned_cols=79 Identities=19% Similarity=0.266 Sum_probs=50.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-E--eCh---hhHHH-Hhhh-cCCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-V--FTE---EELRN-ISRD-ASIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v--~~~---~d~~~-i~~~-t~g~g~ 284 (405)
.+.+++|.|++|++|.+.+..+...|++|+.+.++.+ ..+..+.....+... . .|- ++... +.+. .....+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999999888876543 222233333334331 1 232 22222 2221 113468
Q ss_pred cEEEECCC
Q psy2960 285 KLALNCVG 292 (405)
Q Consensus 285 Dvvld~~g 292 (405)
|++|.+.|
T Consensus 84 d~vi~~ag 91 (263)
T PRK08226 84 DILVNNAG 91 (263)
T ss_pred CEEEECCC
Confidence 99999888
No 332
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.02 E-value=0.035 Score=50.90 Aligned_cols=35 Identities=11% Similarity=0.249 Sum_probs=31.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRN 247 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~ 247 (405)
.|+++||.||++++|.+.+..+...|++|+.+.++
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~ 41 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNS 41 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 57899999999999999999999999998877644
No 333
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.02 E-value=0.075 Score=44.67 Aligned_cols=91 Identities=14% Similarity=0.211 Sum_probs=56.8
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEEC
Q psy2960 211 LSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNC 290 (405)
Q Consensus 211 ~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~ 290 (405)
.-.|++++|.|= |-+|...++.++.+|++|+++-. .+.+.-.+..-|.+ +.. .++ . -...|+++.+
T Consensus 20 ~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~----DPi~alqA~~dGf~-v~~---~~~---a--~~~adi~vta 85 (162)
T PF00670_consen 20 MLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEI----DPIRALQAAMDGFE-VMT---LEE---A--LRDADIFVTA 85 (162)
T ss_dssp --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-S----SHHHHHHHHHTT-E-EE----HHH---H--TTT-SEEEE-
T ss_pred eeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEEC----ChHHHHHhhhcCcE-ecC---HHH---H--HhhCCEEEEC
Confidence 458999999999 99999999999999999988842 23333334444554 322 222 1 1246999999
Q ss_pred CCchhH--HHHHHhcccCCEEEEEecc
Q psy2960 291 VGGNSA--TNLLRTLVSKGVMVTYGGM 315 (405)
Q Consensus 291 ~g~~~~--~~~~~~l~~~G~~v~~g~~ 315 (405)
+|.... .+-++.|+.+-.+..+|..
T Consensus 86 TG~~~vi~~e~~~~mkdgail~n~Gh~ 112 (162)
T PF00670_consen 86 TGNKDVITGEHFRQMKDGAILANAGHF 112 (162)
T ss_dssp SSSSSSB-HHHHHHS-TTEEEEESSSS
T ss_pred CCCccccCHHHHHHhcCCeEEeccCcC
Confidence 998653 4668888887777776643
No 334
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.02 E-value=0.019 Score=52.49 Aligned_cols=77 Identities=13% Similarity=0.172 Sum_probs=49.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-e--C---hhhHHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-F--T---EEELRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~--~---~~d~~~-i~~~t-~g~g~ 284 (405)
.+.++||.|++|++|...++.+...|++|+.+.++.+..+ +...+++.... + | .++... +.+.. ....+
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARAR---LAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH---HHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4679999999999999999999999999998876644322 22223332211 1 2 222222 22211 12468
Q ss_pred cEEEECCC
Q psy2960 285 KLALNCVG 292 (405)
Q Consensus 285 Dvvld~~g 292 (405)
|+++.+.|
T Consensus 82 d~li~~ag 89 (257)
T PRK07067 82 DILFNNAA 89 (257)
T ss_pred CEEEECCC
Confidence 99999886
No 335
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.01 E-value=0.034 Score=50.84 Aligned_cols=79 Identities=11% Similarity=0.113 Sum_probs=49.1
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHH-cCCcE--Ee--Chhh---HHH-Hhhhc-CCCC
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADY--VF--TEEE---LRN-ISRDA-SIPK 283 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~-lg~~~--v~--~~~d---~~~-i~~~t-~g~g 283 (405)
+++|||.|++|++|.+.+..+...|++++.+.++.+..+...+..+. .+... .+ |-.+ ... +.+.. ...+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999988999998887665433332232222 22111 12 2222 222 22211 1246
Q ss_pred CcEEEECCC
Q psy2960 284 PKLALNCVG 292 (405)
Q Consensus 284 ~Dvvld~~g 292 (405)
+|+++++.|
T Consensus 82 id~vv~~ag 90 (259)
T PRK12384 82 VDLLVYNAG 90 (259)
T ss_pred CCEEEECCC
Confidence 899999987
No 336
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.019 Score=53.19 Aligned_cols=76 Identities=18% Similarity=0.289 Sum_probs=47.8
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-E--eChhh---HHH-Hhhhc-CCCCCcE
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-V--FTEEE---LRN-ISRDA-SIPKPKL 286 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v--~~~~d---~~~-i~~~t-~g~g~Dv 286 (405)
.+|||.||+|++|...++.+...|++|+++.++.+..+ +.....+... + .|..+ ... +.+.. ...++|+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALD---DLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 57999999999999999988889999999887643321 1112223221 1 23222 222 22211 1356899
Q ss_pred EEECCCc
Q psy2960 287 ALNCVGG 293 (405)
Q Consensus 287 vld~~g~ 293 (405)
+|.+.|.
T Consensus 80 vi~~ag~ 86 (276)
T PRK06482 80 VVSNAGY 86 (276)
T ss_pred EEECCCC
Confidence 9999873
No 337
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=95.99 E-value=0.052 Score=49.36 Aligned_cols=79 Identities=14% Similarity=0.188 Sum_probs=50.2
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eChhh---HHH-Hhhhc-CCCCCcE
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTEEE---LRN-ISRDA-SIPKPKL 286 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~~d---~~~-i~~~t-~g~g~Dv 286 (405)
.+++|.|++|++|...++.+...|++++.+.++.+..+...+.++..+.... .|-.+ ... +.+.. ....+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3799999999999999999999999998887664433333334444453221 13222 222 22221 1246899
Q ss_pred EEECCCc
Q psy2960 287 ALNCVGG 293 (405)
Q Consensus 287 vld~~g~ 293 (405)
++++.|.
T Consensus 81 vi~~ag~ 87 (254)
T TIGR02415 81 MVNNAGV 87 (254)
T ss_pred EEECCCc
Confidence 9999874
No 338
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=95.99 E-value=0.057 Score=49.45 Aligned_cols=81 Identities=16% Similarity=0.206 Sum_probs=51.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHHcCCcEE---eChhh---HHH-Hhhh-cCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-IDKLKSYLKSLGADYV---FTEEE---LRN-ISRD-ASIPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~-~~~~~~~~~~lg~~~v---~~~~d---~~~-i~~~-t~g~g 283 (405)
.|.++||.|++|++|...++.+...|++++.+.++.+. .+...+.++..+.... .|-.+ ... +.+. ....+
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999998887764432 1222333344443321 23222 222 2221 11246
Q ss_pred CcEEEECCCc
Q psy2960 284 PKLALNCVGG 293 (405)
Q Consensus 284 ~Dvvld~~g~ 293 (405)
+|+++++.|.
T Consensus 86 id~lv~~ag~ 95 (261)
T PRK08936 86 LDVMINNAGI 95 (261)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 339
>PRK05717 oxidoreductase; Validated
Probab=95.98 E-value=0.038 Score=50.48 Aligned_cols=78 Identities=13% Similarity=0.120 Sum_probs=49.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eCh---hhHHH-HhhhcC-CCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTE---EELRN-ISRDAS-IPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~---~d~~~-i~~~t~-g~g~ 284 (405)
.|.+|+|.|++|++|..++..+...|++|+.+.++.++. .+..+.++.... .|- ++... +.+... .+.+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERG---SKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHH---HHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999988999998886554322 222334443221 232 22222 222211 2368
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++.+.|.
T Consensus 86 d~li~~ag~ 94 (255)
T PRK05717 86 DALVCNAAI 94 (255)
T ss_pred CEEEECCCc
Confidence 999998874
No 340
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.98 E-value=0.11 Score=43.85 Aligned_cols=88 Identities=11% Similarity=0.079 Sum_probs=56.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 292 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g 292 (405)
.|.+|+|.|| |.+|..-++.+...|++|.++. ++.. +.+.+++.-. +..+.+.+ .+-.++|+|+-+++
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~----~~l~~l~~i~-~~~~~~~~----~dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEIC----KEMKELPYIT-WKQKTFSN----DDIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccC----HHHHhccCcE-EEecccCh----hcCCCceEEEECCC
Confidence 6899999999 9999999988888999988773 2322 2223444211 22222222 11246799999999
Q ss_pred chhHHHHHHhcccCCEEEEE
Q psy2960 293 GNSATNLLRTLVSKGVMVTY 312 (405)
Q Consensus 293 ~~~~~~~~~~l~~~G~~v~~ 312 (405)
.+.....+...++.+.++..
T Consensus 80 d~e~N~~i~~~a~~~~~vn~ 99 (157)
T PRK06719 80 QHAVNMMVKQAAHDFQWVNV 99 (157)
T ss_pred CHHHHHHHHHHHHHCCcEEE
Confidence 98887665444433334443
No 341
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.97 E-value=0.046 Score=50.63 Aligned_cols=106 Identities=20% Similarity=0.214 Sum_probs=61.8
Q ss_pred HHHHHHhhc--CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHHcCCc-EEeChhhHHHHh
Q psy2960 201 AYRMLKDYN--SLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGAD-YVFTEEELRNIS 276 (405)
Q Consensus 201 a~~al~~~~--~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~~~~lg~~-~v~~~~d~~~i~ 276 (405)
-+.+|.+.. ...+|++|+|.|+ ||.+.+++.-++..|+. ++++-|+.++.++..+.+.+.+.. ......+.+.
T Consensus 111 ~~~~L~~~~~~~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~-- 187 (283)
T COG0169 111 FLRALKEFGLPVDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEG-- 187 (283)
T ss_pred HHHHHHhcCCCcccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccc--
Confidence 344454422 2346899999999 99999999999999975 556656555544444444444431 1111111110
Q ss_pred hhcCCCCCcEEEECCCchhHH------HHHHhcccCCEEEEEe
Q psy2960 277 RDASIPKPKLALNCVGGNSAT------NLLRTLVSKGVMVTYG 313 (405)
Q Consensus 277 ~~t~g~g~Dvvld~~g~~~~~------~~~~~l~~~G~~v~~g 313 (405)
...+|++|||++..... ....++++.-.+..+-
T Consensus 188 ----~~~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~v 226 (283)
T COG0169 188 ----LEEADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVV 226 (283)
T ss_pred ----ccccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEec
Confidence 11489999998632111 0145666666666654
No 342
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=95.97 E-value=0.054 Score=48.96 Aligned_cols=79 Identities=9% Similarity=0.078 Sum_probs=49.7
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCcEEEEe-cCCcchHHHHHHHHHcCCcEE---eChh---hHHH-Hhhhc-CCCCCc
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGLKTINIV-RNRDDIDKLKSYLKSLGADYV---FTEE---ELRN-ISRDA-SIPKPK 285 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~-~~~~~~~~~~~~~~~lg~~~v---~~~~---d~~~-i~~~t-~g~g~D 285 (405)
.++||.|++|++|...+..+...|++|+++. ++.++.++........+.... .|-. +... +.+.. ...++|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 4799999999999999999989999987754 333332333333444443221 2322 2333 33321 245789
Q ss_pred EEEECCCc
Q psy2960 286 LALNCVGG 293 (405)
Q Consensus 286 vvld~~g~ 293 (405)
+++.+.|.
T Consensus 82 ~vi~~ag~ 89 (247)
T PRK09730 82 ALVNNAGI 89 (247)
T ss_pred EEEECCCC
Confidence 99999984
No 343
>PRK07201 short chain dehydrogenase; Provisional
Probab=95.96 E-value=0.035 Score=58.28 Aligned_cols=80 Identities=19% Similarity=0.254 Sum_probs=53.0
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eCh---hhHHH-Hhhhc-CCCCCc
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTE---EELRN-ISRDA-SIPKPK 285 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~---~d~~~-i~~~t-~g~g~D 285 (405)
|.+++|.||+|++|...+..+...|++|+.+.++.+..++..+.+...+.... .|- ++... +.+.. ..+++|
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 450 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD 450 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 67999999999999999998888999999998775544443444444443322 132 22333 22221 124689
Q ss_pred EEEECCCc
Q psy2960 286 LALNCVGG 293 (405)
Q Consensus 286 vvld~~g~ 293 (405)
+++++.|.
T Consensus 451 ~li~~Ag~ 458 (657)
T PRK07201 451 YLVNNAGR 458 (657)
T ss_pred EEEECCCC
Confidence 99999983
No 344
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=95.95 E-value=0.086 Score=41.96 Aligned_cols=103 Identities=22% Similarity=0.336 Sum_probs=61.3
Q ss_pred hhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcC-CcEEEEecCCcchHHHHHHHHHcCCcEE-eChhhHHH-HhhhcCCCC
Q psy2960 207 DYNSLSPGDVVIQNGANSACGQNVIQIARHWG-LKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEELRN-ISRDASIPK 283 (405)
Q Consensus 207 ~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G-~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d~~~-i~~~t~g~g 283 (405)
....+.++++|+-.|+ |.|..+..+++..+ .+++++-.+.+..+...+.+..++...+ +-..+... .... ...
T Consensus 13 ~~~~~~~~~~vldlG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 88 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGA--GSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDS--LPE 88 (124)
T ss_pred HHcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhh--cCC
Confidence 3356778899999998 44999999999875 4666664333333332333444554322 11112111 1111 247
Q ss_pred CcEEEECCCch----hHHHHHHhcccCCEEEEEe
Q psy2960 284 PKLALNCVGGN----SATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 284 ~Dvvld~~g~~----~~~~~~~~l~~~G~~v~~g 313 (405)
+|+|+-..+.. .+..+.+.|+++|+++.-.
T Consensus 89 ~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 89 PDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred CCEEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 99999765432 3345789999999998753
No 345
>PRK05855 short chain dehydrogenase; Validated
Probab=95.92 E-value=0.041 Score=56.63 Aligned_cols=81 Identities=15% Similarity=0.207 Sum_probs=53.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE---eChhh---HHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FTEEE---LRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v---~~~~d---~~~-i~~~t-~g~g~ 284 (405)
.+.++||.||+|++|.+.++.+...|++|+.+.++.++.++..+..++.|.... .|-.| ... +.+.. ..+.+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 467899999999999999999989999998888765544444444445554221 23222 222 22221 13468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++++.|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999999974
No 346
>PRK08264 short chain dehydrogenase; Validated
Probab=95.90 E-value=0.043 Score=49.39 Aligned_cols=72 Identities=19% Similarity=0.293 Sum_probs=47.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHHcCCc-EE--eChhh---HHHHhhhcCCCCCc
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGAD-YV--FTEEE---LRNISRDASIPKPK 285 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~-~v~~~~~~~~~~~~~~~~~~~lg~~-~v--~~~~d---~~~i~~~t~g~g~D 285 (405)
.+.+|+|.||+|++|...++.+...|+ +|+.+.++.++ .+. .+.. .+ .|..+ ...+.+. -..+|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~----~~~---~~~~~~~~~~D~~~~~~~~~~~~~--~~~id 75 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPES----VTD---LGPRVVPLQLDVTDPASVAAAAEA--ASDVT 75 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhh----hhh---cCCceEEEEecCCCHHHHHHHHHh--cCCCC
Confidence 568999999999999999999999999 88878765432 111 2222 11 23222 2222222 23589
Q ss_pred EEEECCCc
Q psy2960 286 LALNCVGG 293 (405)
Q Consensus 286 vvld~~g~ 293 (405)
+||.+.|.
T Consensus 76 ~vi~~ag~ 83 (238)
T PRK08264 76 ILVNNAGI 83 (238)
T ss_pred EEEECCCc
Confidence 99999886
No 347
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=95.89 E-value=0.044 Score=51.91 Aligned_cols=80 Identities=15% Similarity=0.057 Sum_probs=48.8
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcC-CcEEEEecCCcchHHHHHHHHHcCCc-EE--eChhh---HHH-Hhhhc-CCCCC
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWG-LKTINIVRNRDDIDKLKSYLKSLGAD-YV--FTEEE---LRN-ISRDA-SIPKP 284 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G-~~v~~~~~~~~~~~~~~~~~~~lg~~-~v--~~~~d---~~~-i~~~t-~g~g~ 284 (405)
+.+++|.|+++|+|.+.+..+...| ++++.+.++.++.++..+.+...+.. .+ .|-.+ ... +.+.. ..+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 6789999999999999998888889 89888876654322222222111211 11 23222 222 22221 13469
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|++|++.|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999998873
No 348
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=95.88 E-value=0.082 Score=51.95 Aligned_cols=77 Identities=16% Similarity=0.118 Sum_probs=51.1
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECC
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCV 291 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~ 291 (405)
-.|.+|||.|+ |++|.+++..+...|+..+.+++.... ...+++..++...+...++... . -..+|+||+|+
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~--ra~~La~~~~~~~~~~~~~l~~---~--l~~aDiVI~aT 250 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIE--KAQKITSAFRNASAHYLSELPQ---L--IKKADIIIAAV 250 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHH--HHHHHHHHhcCCeEecHHHHHH---H--hccCCEEEECc
Confidence 36789999999 999999999999999876665543222 2234455565223444444333 1 13479999999
Q ss_pred CchhH
Q psy2960 292 GGNSA 296 (405)
Q Consensus 292 g~~~~ 296 (405)
+.+..
T Consensus 251 ~a~~~ 255 (414)
T PRK13940 251 NVLEY 255 (414)
T ss_pred CCCCe
Confidence 98654
No 349
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=95.88 E-value=0.11 Score=49.69 Aligned_cols=77 Identities=10% Similarity=0.076 Sum_probs=46.6
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCC---cEE-eChhhHHHHhhhcCCCCCcEEEECC
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA---DYV-FTEEELRNISRDASIPKPKLALNCV 291 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~---~~v-~~~~d~~~i~~~t~g~g~Dvvld~~ 291 (405)
+|||.||+|.+|...+..+...|.+|+++.+..+..........+++. ..+ .|-.|...+.+.....++|+|+++.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~a 81 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHFA 81 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEECC
Confidence 699999999999999998888899998875432221222222223322 111 2333333233322234799999987
Q ss_pred C
Q psy2960 292 G 292 (405)
Q Consensus 292 g 292 (405)
+
T Consensus 82 ~ 82 (338)
T PRK10675 82 G 82 (338)
T ss_pred c
Confidence 6
No 350
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=95.88 E-value=0.068 Score=49.85 Aligned_cols=95 Identities=14% Similarity=0.089 Sum_probs=52.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEe-cCCcchHHHHHHHHH-cCCcEEeChhhHHHHhhhcCCCCCcEEEEC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIV-RNRDDIDKLKSYLKS-LGADYVFTEEELRNISRDASIPKPKLALNC 290 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~-~~~~~~~~~~~~~~~-lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~ 290 (405)
.+.+|+|.|+ ||+|.+++..+...|++.+.++ ++.++.+...+.+.. .+...+...++..+ . -..+|+||+|
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~---~--~~~aDiVIna 199 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSDLAA---A--LAAADGLVHA 199 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHh---h--hCCCCEEEEC
Confidence 5689999999 9999999999999999655555 333332222222211 12122222222221 1 1357999999
Q ss_pred CCchh-----HHHHHHhcccCCEEEEEe
Q psy2960 291 VGGNS-----ATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 291 ~g~~~-----~~~~~~~l~~~G~~v~~g 313 (405)
+.... ..-....++++..++.+-
T Consensus 200 Tp~Gm~~~~~~~~~~~~l~~~~~v~Div 227 (284)
T PRK12549 200 TPTGMAKHPGLPLPAELLRPGLWVADIV 227 (284)
T ss_pred CcCCCCCCCCCCCCHHHcCCCcEEEEee
Confidence 64211 000124456655555554
No 351
>PRK06398 aldose dehydrogenase; Validated
Probab=95.87 E-value=0.013 Score=53.68 Aligned_cols=36 Identities=22% Similarity=0.319 Sum_probs=32.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 248 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~ 248 (405)
.|+++||.|++|++|.+.+..+...|++|+.+.++.
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~ 40 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKE 40 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence 478999999999999999999999999999887654
No 352
>PRK12744 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.065 Score=48.95 Aligned_cols=81 Identities=21% Similarity=0.300 Sum_probs=49.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcc----hHHHHHHHHHcCCcE-E--eChh---hHHH-Hhhhc-C
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD----IDKLKSYLKSLGADY-V--FTEE---ELRN-ISRDA-S 280 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~----~~~~~~~~~~lg~~~-v--~~~~---d~~~-i~~~t-~ 280 (405)
.+.++||.|++|++|.+.++.+...|++++.++++.+. .+...+.+...+.+. . .|-. +... +.+.. .
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 46899999999999999999999999997777643221 122222333344332 1 2322 2222 22211 1
Q ss_pred CCCCcEEEECCCc
Q psy2960 281 IPKPKLALNCVGG 293 (405)
Q Consensus 281 g~g~Dvvld~~g~ 293 (405)
.+++|++|++.|.
T Consensus 87 ~~~id~li~~ag~ 99 (257)
T PRK12744 87 FGRPDIAINTVGK 99 (257)
T ss_pred hCCCCEEEECCcc
Confidence 2468999999884
No 353
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=95.86 E-value=0.17 Score=40.97 Aligned_cols=94 Identities=15% Similarity=0.310 Sum_probs=63.0
Q ss_pred EEEeCCCcHHHHHHHHHHHHcC--CcEEEEecCCcchHHHHHHHHHcCCcEEeChhh--HH-------------------
Q psy2960 217 VIQNGANSACGQNVIQIARHWG--LKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LR------------------- 273 (405)
Q Consensus 217 VLI~ga~G~vG~~aiqla~~~G--~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d--~~------------------- 273 (405)
|.|.|++|.+|..+..+.+... .++++.+... ..+...+.++++....+.-.++ ..
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~-n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGS-NIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESS-THHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCC-CHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 6799999999999999999997 7888887643 4577788889998887753221 11
Q ss_pred H-HhhhcCCCCCcEEEECCCc-hhHHHHHHhcccCCEEEE
Q psy2960 274 N-ISRDASIPKPKLALNCVGG-NSATNLLRTLVSKGVMVT 311 (405)
Q Consensus 274 ~-i~~~t~g~g~Dvvld~~g~-~~~~~~~~~l~~~G~~v~ 311 (405)
+ +.+......+|+|++++.+ .-+...+..+..+-++..
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL 119 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL 119 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence 1 2233333578999997755 455566777776655543
No 354
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.018 Score=51.76 Aligned_cols=72 Identities=19% Similarity=0.249 Sum_probs=48.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCc-EEeCh---hhHHH-HhhhcCCCCCcEE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD-YVFTE---EELRN-ISRDASIPKPKLA 287 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~-~v~~~---~d~~~-i~~~t~g~g~Dvv 287 (405)
.+.++||.|++|++|...++.+...|++|+.+.++.+. ..... ...|. ++... +.+.....++|++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~v 72 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID---------DFPGELFACDLADIEQTAATLAQINEIHPVDAI 72 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc---------ccCceEEEeeCCCHHHHHHHHHHHHHhCCCcEE
Confidence 36789999999999999999999999999998866432 11111 11232 22333 3333333368999
Q ss_pred EECCCc
Q psy2960 288 LNCVGG 293 (405)
Q Consensus 288 ld~~g~ 293 (405)
|.+.|.
T Consensus 73 i~~ag~ 78 (234)
T PRK07577 73 VNNVGI 78 (234)
T ss_pred EECCCC
Confidence 999874
No 355
>PRK14967 putative methyltransferase; Provisional
Probab=95.83 E-value=0.13 Score=46.14 Aligned_cols=99 Identities=12% Similarity=0.115 Sum_probs=57.0
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEE
Q psy2960 209 NSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLA 287 (405)
Q Consensus 209 ~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~-~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvv 287 (405)
..++++++||-.|+ |. |..++.+++. |+ +++++-.+.+..+...+.+...+.+..+...|+.. ......+|+|
T Consensus 32 ~~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~---~~~~~~fD~V 105 (223)
T PRK14967 32 EGLGPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWAR---AVEFRPFDVV 105 (223)
T ss_pred cccCCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhh---hccCCCeeEE
Confidence 46788999999998 44 8888888875 66 55555333222222222333344432222233322 1123578999
Q ss_pred EECCCc----------------------------hhHHHHHHhcccCCEEEEEe
Q psy2960 288 LNCVGG----------------------------NSATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 288 ld~~g~----------------------------~~~~~~~~~l~~~G~~v~~g 313 (405)
+...+- ..+..+.+.|+++|+++.+-
T Consensus 106 i~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~ 159 (223)
T PRK14967 106 VSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ 159 (223)
T ss_pred EECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 865210 01234678999999998764
No 356
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.048 Score=48.67 Aligned_cols=75 Identities=19% Similarity=0.263 Sum_probs=49.1
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-EeChhh---HHHHhhhcCCCCCcEEEEC
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VFTEEE---LRNISRDASIPKPKLALNC 290 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v~~~~d---~~~i~~~t~g~g~Dvvld~ 290 (405)
++++|+|++|++|...++.+...|++++.+.++.+. .+.+...+... ..|-.+ ...+.+...+.++|+++.+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~----~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ 77 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAA----LAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYV 77 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHH----HHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEEC
Confidence 479999999999999999888889999888766433 23334444432 223222 2222222234579999998
Q ss_pred CCc
Q psy2960 291 VGG 293 (405)
Q Consensus 291 ~g~ 293 (405)
.|.
T Consensus 78 ag~ 80 (222)
T PRK06953 78 AGV 80 (222)
T ss_pred CCc
Confidence 874
No 357
>KOG1209|consensus
Probab=95.81 E-value=0.069 Score=46.56 Aligned_cols=99 Identities=16% Similarity=0.204 Sum_probs=64.3
Q ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-EeC---hhh---HHH-HhhhcCCCC
Q psy2960 213 PGDVVIQNGA-NSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VFT---EEE---LRN-ISRDASIPK 283 (405)
Q Consensus 213 ~g~~VLI~ga-~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v~~---~~d---~~~-i~~~t~g~g 283 (405)
....|||.|+ +||+|.+.+.-....|+.|++++++.+... ++..+.|... =+| .++ +.. +++.+ .+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~---~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~-~Gk 81 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMA---QLAIQFGLKPYKLDVSKPEEVVTVSGEVRANP-DGK 81 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHh---hHHHhhCCeeEEeccCChHHHHHHHHHHhhCC-CCc
Confidence 3467999987 589999998888889999999998776532 2333555321 122 222 233 55443 456
Q ss_pred CcEEEECCCchh-------------------------HHHH--HHhcccCCEEEEEecc
Q psy2960 284 PKLALNCVGGNS-------------------------ATNL--LRTLVSKGVMVTYGGM 315 (405)
Q Consensus 284 ~Dvvld~~g~~~-------------------------~~~~--~~~l~~~G~~v~~g~~ 315 (405)
.|+.+|..|.+. ...+ -.+.+..|+|+.+|+.
T Consensus 82 ld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl 140 (289)
T KOG1209|consen 82 LDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSL 140 (289)
T ss_pred eEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecce
Confidence 899999877431 1112 2345788999999875
No 358
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=95.78 E-value=0.02 Score=48.95 Aligned_cols=97 Identities=18% Similarity=0.238 Sum_probs=61.0
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeC-------------------hhhHHH
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFT-------------------EEELRN 274 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~-------------------~~d~~~ 274 (405)
..+|+|.|+ |.+|+.|+.+++.+|+++++.- ....+++....+++..+.. ......
T Consensus 20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (168)
T PF01262_consen 20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPD----ERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYES 94 (168)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEE----SSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHH
T ss_pred CeEEEEECC-CHHHHHHHHHHhHCCCEEEecc----CCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHH
Confidence 378999998 9999999999999999998885 3344566666777654432 111111
Q ss_pred -HhhhcCCCCCcEEEECC---Cc--hh--HHHHHHhcccCCEEEEEeccCC
Q psy2960 275 -ISRDASIPKPKLALNCV---GG--NS--ATNLLRTLVSKGVMVTYGGMSR 317 (405)
Q Consensus 275 -i~~~t~g~g~Dvvld~~---g~--~~--~~~~~~~l~~~G~~v~~g~~~~ 317 (405)
+.+.. ..+|+||.+. +. +. ..+.++.|+++..++.+....+
T Consensus 95 ~f~~~i--~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~g 143 (168)
T PF01262_consen 95 NFAEFI--APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQG 143 (168)
T ss_dssp HHHHHH--HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT
T ss_pred HHHHHH--hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCC
Confidence 22221 2459988533 21 21 2456888999888988864433
No 359
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.78 E-value=0.065 Score=48.29 Aligned_cols=80 Identities=16% Similarity=0.260 Sum_probs=49.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHH-HHHHHHHcCCcE-E--eChhh---HHH-Hhhhc-CCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDK-LKSYLKSLGADY-V--FTEEE---LRN-ISRDA-SIPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~-~~~~~~~lg~~~-v--~~~~d---~~~-i~~~t-~g~g 283 (405)
+..+|||.|++|++|...++.+...|+++++++++.++... ........+... + .|..+ +.. +.+.. ...+
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 35689999999999999999999999998887766543221 222223333321 1 23222 222 22211 1247
Q ss_pred CcEEEECCC
Q psy2960 284 PKLALNCVG 292 (405)
Q Consensus 284 ~Dvvld~~g 292 (405)
+|+||.+.|
T Consensus 85 id~vi~~ag 93 (249)
T PRK12825 85 IDILVNNAG 93 (249)
T ss_pred CCEEEECCc
Confidence 899999987
No 360
>PRK07402 precorrin-6B methylase; Provisional
Probab=95.77 E-value=0.2 Score=43.85 Aligned_cols=106 Identities=18% Similarity=0.241 Sum_probs=59.5
Q ss_pred HHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHc-CCcEEEEecCCcchHHHHHHHHHcCCcEE-eChhhHHH-HhhhcC
Q psy2960 204 MLKDYNSLSPGDVVIQNGANSACGQNVIQIARHW-GLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEELRN-ISRDAS 280 (405)
Q Consensus 204 al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~-G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d~~~-i~~~t~ 280 (405)
.+.....++++++||=.|+ |.|..++.+++.. +.+++++-.+.+..+...+.+..++.+.+ +-..|..+ +....
T Consensus 31 ~l~~~l~~~~~~~VLDiG~--G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~- 107 (196)
T PRK07402 31 LLISQLRLEPDSVLWDIGA--GTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLA- 107 (196)
T ss_pred HHHHhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCC-
Confidence 3444567889999988887 5577777888765 56777775444333333344445665432 11122222 22211
Q ss_pred CCCCcE-EEECCCc--hhHHHHHHhcccCCEEEEEe
Q psy2960 281 IPKPKL-ALNCVGG--NSATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 281 g~g~Dv-vld~~g~--~~~~~~~~~l~~~G~~v~~g 313 (405)
..+|. +++.... ..+..+.+.|+++|+++...
T Consensus 108 -~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 108 -PAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred -CCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 12344 4443221 33456678999999998764
No 361
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=95.76 E-value=0.074 Score=48.21 Aligned_cols=78 Identities=13% Similarity=0.152 Sum_probs=48.1
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHHcCCcEEe---Ch---hhHHH-Hhhhc-CCCCCc
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD-DIDKLKSYLKSLGADYVF---TE---EELRN-ISRDA-SIPKPK 285 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~-~~~~~~~~~~~lg~~~v~---~~---~d~~~-i~~~t-~g~g~D 285 (405)
++|||.|++|++|...++.....|++++.+.++.. ..+...+.++..+....+ |- ++... +.+.. ....+|
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD 82 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence 57999999999999999999999999887654332 222223333444433221 22 22222 22221 124689
Q ss_pred EEEECCC
Q psy2960 286 LALNCVG 292 (405)
Q Consensus 286 vvld~~g 292 (405)
++|.+.|
T Consensus 83 ~li~~ag 89 (248)
T PRK06947 83 ALVNNAG 89 (248)
T ss_pred EEEECCc
Confidence 9999987
No 362
>PRK04148 hypothetical protein; Provisional
Probab=95.71 E-value=0.06 Score=43.82 Aligned_cols=88 Identities=14% Similarity=0.058 Sum_probs=55.8
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEEC
Q psy2960 211 LSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNC 290 (405)
Q Consensus 211 ~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~ 290 (405)
-.++.++++.|. | .|...+..+...|.+|+++-. .+...+.+++.+.+.+.+. =+..-.++ -.++|+|..+
T Consensus 14 ~~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi----~~~aV~~a~~~~~~~v~dD-lf~p~~~~--y~~a~liysi 84 (134)
T PRK04148 14 KGKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDI----NEKAVEKAKKLGLNAFVDD-LFNPNLEI--YKNAKLIYSI 84 (134)
T ss_pred cccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHhCCeEEECc-CCCCCHHH--HhcCCEEEEe
Confidence 345789999999 6 887666666678999999953 3445777888877655431 01110001 2467888888
Q ss_pred CCchhHHHH-HHhcccCC
Q psy2960 291 VGGNSATNL-LRTLVSKG 307 (405)
Q Consensus 291 ~g~~~~~~~-~~~l~~~G 307 (405)
-....++.. ++..++-|
T Consensus 85 rpp~el~~~~~~la~~~~ 102 (134)
T PRK04148 85 RPPRDLQPFILELAKKIN 102 (134)
T ss_pred CCCHHHHHHHHHHHHHcC
Confidence 777666654 45544444
No 363
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.71 E-value=0.078 Score=48.27 Aligned_cols=79 Identities=15% Similarity=0.229 Sum_probs=49.0
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHHcCCcE-Ee--Chhh---HHH-HhhhcC-CCCCc
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-IDKLKSYLKSLGADY-VF--TEEE---LRN-ISRDAS-IPKPK 285 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~-~~~~~~~~~~lg~~~-v~--~~~d---~~~-i~~~t~-g~g~D 285 (405)
.++||.|++|++|...+..+...|++++.+.++.+. .+...+.++..+... ++ |-.+ ... +.+... .+.+|
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID 82 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999999999999888765432 222233333334321 22 3222 222 222211 24689
Q ss_pred EEEECCCc
Q psy2960 286 LALNCVGG 293 (405)
Q Consensus 286 vvld~~g~ 293 (405)
+++.+.|.
T Consensus 83 ~vi~~ag~ 90 (256)
T PRK12745 83 CLVNNAGV 90 (256)
T ss_pred EEEECCcc
Confidence 99999874
No 364
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=95.71 E-value=0.15 Score=46.06 Aligned_cols=161 Identities=16% Similarity=0.164 Sum_probs=91.5
Q ss_pred CCC--cHHHHHHHHHHHHcCCcEEEEecCCcchHH-HHHHHHHcCCcEEe--Ch---hhHHH----HhhhcCCCCCcEEE
Q psy2960 221 GAN--SACGQNVIQIARHWGLKTINIVRNRDDIDK-LKSYLKSLGADYVF--TE---EELRN----ISRDASIPKPKLAL 288 (405)
Q Consensus 221 ga~--G~vG~~aiqla~~~G~~v~~~~~~~~~~~~-~~~~~~~lg~~~v~--~~---~d~~~----i~~~t~g~g~Dvvl 288 (405)
|++ +|+|.+.++-+...|++|+.+.++.++.+. ..+...+.+.+ ++ |- ++... +.+.. ++.+|+++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~-~g~iD~lV 78 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERF-GGRIDILV 78 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHH-CSSESEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhc-CCCeEEEE
Confidence 455 899999999999999999999887665322 33455566755 43 32 22222 22222 26799999
Q ss_pred ECCCch------------------------------hHHHHHHhcccCCEEEEEeccCCCCcccCc--------------
Q psy2960 289 NCVGGN------------------------------SATNLLRTLVSKGVMVTYGGMSREPVQIPT-------------- 324 (405)
Q Consensus 289 d~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-------------- 324 (405)
++.|.. ....++..++++|.++.++...........
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~ 158 (241)
T PF13561_consen 79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLT 158 (241)
T ss_dssp EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHH
T ss_pred ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHH
Confidence 876421 012334577889999999764321111000
Q ss_pred ----ccccc-cCeEEEEEecchhhhhhccHHHHHHHHHHHHHHHHcCcccCCcceeeehhhHHHHHHHHh
Q psy2960 325 ----SAFIF-KDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTM 389 (405)
Q Consensus 325 ----~~~~~-k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~A~~~~~ 389 (405)
.++-. +++++-.+..+....... .. ....+++.+.+.+ ..+..+....+|+.++..+|.
T Consensus 159 r~lA~el~~~~gIrVN~V~pG~i~t~~~--~~-~~~~~~~~~~~~~---~~pl~r~~~~~evA~~v~fL~ 222 (241)
T PF13561_consen 159 RSLAKELAPKKGIRVNAVSPGPIETPMT--ER-IPGNEEFLEELKK---RIPLGRLGTPEEVANAVLFLA 222 (241)
T ss_dssp HHHHHHHGGHGTEEEEEEEESSBSSHHH--HH-HHTHHHHHHHHHH---HSTTSSHBEHHHHHHHHHHHH
T ss_pred HHHHHHhccccCeeeeeecccceeccch--hc-cccccchhhhhhh---hhccCCCcCHHHHHHHHHHHh
Confidence 22334 678888776544321110 00 1112333333332 122234458899999999887
No 365
>PRK06123 short chain dehydrogenase; Provisional
Probab=95.71 E-value=0.077 Score=48.06 Aligned_cols=80 Identities=14% Similarity=0.163 Sum_probs=48.9
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHHcCCcEEe---Chhh---HHH-Hhhhc-CCCCC
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR-DDIDKLKSYLKSLGADYVF---TEEE---LRN-ISRDA-SIPKP 284 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~-~~~~~~~~~~~~lg~~~v~---~~~d---~~~-i~~~t-~g~g~ 284 (405)
+.++||.|++|++|...++.....|++++.+.+++ +..+...+.++..+....+ |-.+ ... +.+.. ..+.+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999998888999887665332 2222233334444543222 3222 222 22221 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|++|.+.|.
T Consensus 82 d~li~~ag~ 90 (248)
T PRK06123 82 DALVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999999874
No 366
>PRK12827 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.066 Score=48.38 Aligned_cols=81 Identities=12% Similarity=0.154 Sum_probs=48.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcch----HHHHHHHHHcCCcEE-e--Chhh---HHH-Hhhh-cC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDI----DKLKSYLKSLGADYV-F--TEEE---LRN-ISRD-AS 280 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~----~~~~~~~~~lg~~~v-~--~~~d---~~~-i~~~-t~ 280 (405)
.+.+++|.|++|++|...+..+...|++++.+.+..... +...+.....+.... + |..+ ... +.+. ..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 467899999999999999998889999988865422211 112223333343321 1 2222 222 2211 11
Q ss_pred CCCCcEEEECCCc
Q psy2960 281 IPKPKLALNCVGG 293 (405)
Q Consensus 281 g~g~Dvvld~~g~ 293 (405)
..++|.+|.+.|.
T Consensus 85 ~~~~d~vi~~ag~ 97 (249)
T PRK12827 85 FGRLDILVNNAGI 97 (249)
T ss_pred hCCCCEEEECCCC
Confidence 2468999999874
No 367
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.67 E-value=0.078 Score=47.44 Aligned_cols=72 Identities=19% Similarity=0.217 Sum_probs=47.2
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eChh---hHHH-HhhhcCCCCCcEEEEC
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEE---ELRN-ISRDASIPKPKLALNC 290 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~---d~~~-i~~~t~g~g~Dvvld~ 290 (405)
+++|.||+|++|.+.++.+...|++++.+.++.++. .+...+++...+ .|-. +... +.+.. ..+|+++++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~---~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~--~~id~lv~~ 76 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDL---EVAAKELDVDAIVCDNTDPASLEEARGLFP--HHLDTIVNV 76 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHhccCcEEecCCCCHHHHHHHHHHHh--hcCcEEEEC
Confidence 589999999999999999988999999887654322 223334444333 2322 2333 33332 258999998
Q ss_pred CC
Q psy2960 291 VG 292 (405)
Q Consensus 291 ~g 292 (405)
.|
T Consensus 77 ag 78 (223)
T PRK05884 77 PA 78 (223)
T ss_pred CC
Confidence 65
No 368
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.67 E-value=0.034 Score=50.18 Aligned_cols=78 Identities=13% Similarity=0.207 Sum_probs=47.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-E--eCh---hhHHH-Hhhhc-CCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-V--FTE---EELRN-ISRDA-SIPKP 284 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v--~~~---~d~~~-i~~~t-~g~g~ 284 (405)
++.++||.|++|++|...+..+...|+.++...++.++. .+....++... + .|- ++... +.+.. ...++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKL---EALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGV 81 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHH---HHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999888999777665443322 22223334322 1 122 22222 22111 12468
Q ss_pred cEEEECCCc
Q psy2960 285 KLALNCVGG 293 (405)
Q Consensus 285 Dvvld~~g~ 293 (405)
|+++.+.|.
T Consensus 82 d~vi~~ag~ 90 (245)
T PRK12936 82 DILVNNAGI 90 (245)
T ss_pred CEEEECCCC
Confidence 999999873
No 369
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.66 E-value=0.058 Score=49.41 Aligned_cols=80 Identities=16% Similarity=0.175 Sum_probs=49.0
Q ss_pred CCCEEEEeCC--CcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCc--EE-eCh---hhHHH-Hhhhc-CCC
Q psy2960 213 PGDVVIQNGA--NSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD--YV-FTE---EELRN-ISRDA-SIP 282 (405)
Q Consensus 213 ~g~~VLI~ga--~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~--~v-~~~---~d~~~-i~~~t-~g~ 282 (405)
.|++++|.|+ ++|+|.+.++.+...|++|+.+.++... +...+...+++.. .+ .|- ++... +.+.. ...
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g 84 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRAL-RLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD 84 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccch-hHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 5789999999 7999999999988899999887654311 1112223334321 11 232 22222 22221 124
Q ss_pred CCcEEEECCCc
Q psy2960 283 KPKLALNCVGG 293 (405)
Q Consensus 283 g~Dvvld~~g~ 293 (405)
++|+++++.|.
T Consensus 85 ~iD~li~nAG~ 95 (256)
T PRK07889 85 GLDGVVHSIGF 95 (256)
T ss_pred CCcEEEEcccc
Confidence 69999998874
No 370
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=95.65 E-value=0.071 Score=51.35 Aligned_cols=80 Identities=16% Similarity=0.227 Sum_probs=50.0
Q ss_pred CCCCEEEEeCCCcHHHHH--HHHHHHHcCCcEEEEecCCcchH------------HHHHHHHHcCCcEE-e--Ch---hh
Q psy2960 212 SPGDVVIQNGANSACGQN--VIQIARHWGLKTINIVRNRDDID------------KLKSYLKSLGADYV-F--TE---EE 271 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~--aiqla~~~G~~v~~~~~~~~~~~------------~~~~~~~~lg~~~v-~--~~---~d 271 (405)
.-|+++||.|+++++|++ .++.+ ..|++++++....+..+ ...+.+.+.|.... + |- ++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 446899999999999999 45555 88999888763322211 12344556675422 2 21 22
Q ss_pred HHH----HhhhcCCCCCcEEEECCCch
Q psy2960 272 LRN----ISRDASIPKPKLALNCVGGN 294 (405)
Q Consensus 272 ~~~----i~~~t~g~g~Dvvld~~g~~ 294 (405)
..+ +.+. -+++|+++++++..
T Consensus 118 v~~lie~I~e~--~G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQD--LGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHh--cCCCCEEEECCccC
Confidence 222 3332 24699999999865
No 371
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.058 Score=49.11 Aligned_cols=36 Identities=19% Similarity=0.271 Sum_probs=32.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 248 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~ 248 (405)
.|+++||.|++|++|.+.++.+...|++++.+.++.
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~ 40 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRA 40 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCh
Confidence 578999999999999999999999999999887654
No 372
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=95.59 E-value=0.27 Score=45.76 Aligned_cols=151 Identities=15% Similarity=0.269 Sum_probs=87.3
Q ss_pred CCCCCCEEEecCCCCCcccceEeecccceEEcCCCCChhhhccCCCcHHHHHH--HHHhhcCCCCCCEEEEeCCCcHHHH
Q psy2960 151 SLAVGDHVIPDTQHLGTWRNYGKFNHDVLMKVPKDIALTEISGITSNPCTAYR--MLKDYNSLSPGDVVIQNGANSACGQ 228 (405)
Q Consensus 151 ~~~~GdrV~~~~~~~G~~a~~~~v~~~~~~~iP~~~s~~~Aa~~~~~~~ta~~--al~~~~~~~~g~~VLI~ga~G~vG~ 228 (405)
-.++|+|.+..+ +|.+|..-....++++.+++.|- ......|++. ++.+ .+++|.+||=.|+ |.|.
T Consensus 108 P~rig~~f~I~P----sw~~~~~~~~~~~i~lDPGlAFG----TG~HpTT~lcL~~Le~--~~~~g~~vlDvGc--GSGI 175 (300)
T COG2264 108 PVRIGERFVIVP----SWREYPEPSDELNIELDPGLAFG----TGTHPTTSLCLEALEK--LLKKGKTVLDVGC--GSGI 175 (300)
T ss_pred cEEeeeeEEECC----CCccCCCCCCceEEEEccccccC----CCCChhHHHHHHHHHH--hhcCCCEEEEecC--ChhH
Confidence 467899888874 56666544356778888888664 2233444333 3433 4569999999998 4466
Q ss_pred HHHHHHHHcCCcEEEEecCCcc-hHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECC-Cchh---HHHHHHhc
Q psy2960 229 NVIQIARHWGLKTINIVRNRDD-IDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCV-GGNS---ATNLLRTL 303 (405)
Q Consensus 229 ~aiqla~~~G~~v~~~~~~~~~-~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~-g~~~---~~~~~~~l 303 (405)
++|.. ..+||..+..++.++. .+..++.++..+.+......-+. ....-.+..+|+|+-.. .... .....+++
T Consensus 176 LaIAa-~kLGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~-~~~~~~~~~~DvIVANILA~vl~~La~~~~~~l 253 (300)
T COG2264 176 LAIAA-AKLGAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFL-LLEVPENGPFDVIVANILAEVLVELAPDIKRLL 253 (300)
T ss_pred HHHHH-HHcCCceEEEecCCHHHHHHHHHHHHHcCCchhhhccccc-chhhcccCcccEEEehhhHHHHHHHHHHHHHHc
Confidence 66654 4568875555544332 23334444445554311000010 11111145799988655 3322 23457889
Q ss_pred ccCCEEEEEecc
Q psy2960 304 VSKGVMVTYGGM 315 (405)
Q Consensus 304 ~~~G~~v~~g~~ 315 (405)
+|+|+++.-|-.
T Consensus 254 kpgg~lIlSGIl 265 (300)
T COG2264 254 KPGGRLILSGIL 265 (300)
T ss_pred CCCceEEEEeeh
Confidence 999999998843
No 373
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.58 E-value=0.08 Score=48.06 Aligned_cols=35 Identities=26% Similarity=0.249 Sum_probs=31.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRN 247 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~ 247 (405)
.++++||.|++|++|...+..+...|++++.+.++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~ 41 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA 41 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 57899999999999999999998999999988754
No 374
>PRK08309 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.34 Score=41.71 Aligned_cols=91 Identities=12% Similarity=0.040 Sum_probs=48.8
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE--eChhh---HHH-Hhhh-cCCCCCcEEE
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV--FTEEE---LRN-ISRD-ASIPKPKLAL 288 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v--~~~~d---~~~-i~~~-t~g~g~Dvvl 288 (405)
+++|.||+ |+|...++.+...|++|+++.++.+..++........+.-.. .|..| ... +... ...+++|+++
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv 80 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV 80 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 58999997 555556666667899998887664332221111211111111 13332 333 3222 1234789999
Q ss_pred ECCCchhHHHHHHhcccCC
Q psy2960 289 NCVGGNSATNLLRTLVSKG 307 (405)
Q Consensus 289 d~~g~~~~~~~~~~l~~~G 307 (405)
+.+-..........++..|
T Consensus 81 ~~vh~~~~~~~~~~~~~~g 99 (177)
T PRK08309 81 AWIHSSAKDALSVVCRELD 99 (177)
T ss_pred EeccccchhhHHHHHHHHc
Confidence 9887665555444444444
No 375
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.52 E-value=0.15 Score=48.66 Aligned_cols=103 Identities=5% Similarity=0.137 Sum_probs=64.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHH-HHHcCCcEEEEecCCc-chHHHHHHHH-HcCCcEEeChhhHHH-HhhhcCCCCCcEEE
Q psy2960 213 PGDVVIQNGANSACGQNVIQI-ARHWGLKTINIVRNRD-DIDKLKSYLK-SLGADYVFTEEELRN-ISRDASIPKPKLAL 288 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiql-a~~~G~~v~~~~~~~~-~~~~~~~~~~-~lg~~~v~~~~d~~~-i~~~t~g~g~Dvvl 288 (405)
...+++|.|+ |+.|.+.+.. +...+++.+.+.+... +.++..+.+. +++.+ +...++.++ + ...|+|+
T Consensus 126 ~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~------~~aDiVi 197 (325)
T PRK08618 126 DAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVNSADEAI------EEADIIV 197 (325)
T ss_pred CCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeCCHHHHH------hcCCEEE
Confidence 4678999999 8999877754 4566887777775432 2222222222 23443 222334443 3 3579999
Q ss_pred ECCCchhHHHHHHhcccCCEEEEEeccCCCCcccCc
Q psy2960 289 NCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPT 324 (405)
Q Consensus 289 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 324 (405)
.|++.....-. +.+++|-.++.+|.......+++.
T Consensus 198 ~aT~s~~p~i~-~~l~~G~hV~~iGs~~p~~~E~~~ 232 (325)
T PRK08618 198 TVTNAKTPVFS-EKLKKGVHINAVGSFMPDMQELPS 232 (325)
T ss_pred EccCCCCcchH-HhcCCCcEEEecCCCCcccccCCH
Confidence 99987655445 889999999999965443334443
No 376
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.51 E-value=0.054 Score=50.48 Aligned_cols=73 Identities=12% Similarity=0.094 Sum_probs=44.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEe-cCCcchHHHHHHHHHcCCc---EEeCh-hhHHHHhhhcCCCCCcEE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIV-RNRDDIDKLKSYLKSLGAD---YVFTE-EELRNISRDASIPKPKLA 287 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~-~~~~~~~~~~~~~~~lg~~---~v~~~-~d~~~i~~~t~g~g~Dvv 287 (405)
.|.+|+|.|+ ||.+.+++..+..+|++.+.++ ++.++.+ +.+..++.. ..+.. ++... . -..+|+|
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~---~La~~~~~~~~~~~~~~~~~~~~---~--~~~~DiV 194 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLS---RLVDLGVQVGVITRLEGDSGGLA---I--EKAAEVL 194 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHH---HHHHHhhhcCcceeccchhhhhh---c--ccCCCEE
Confidence 5789999999 9999999999999999655444 4433322 223333221 11211 11111 1 1358999
Q ss_pred EECCCch
Q psy2960 288 LNCVGGN 294 (405)
Q Consensus 288 ld~~g~~ 294 (405)
|+|++..
T Consensus 195 InaTp~g 201 (282)
T TIGR01809 195 VSTVPAD 201 (282)
T ss_pred EECCCCC
Confidence 9998753
No 377
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=95.51 E-value=0.15 Score=44.39 Aligned_cols=99 Identities=18% Similarity=0.150 Sum_probs=60.3
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHc-CCcEEEEecCCcchHHHHHHHHHcCCcEE-eChhhHHHHhhhcCCCCCcEE
Q psy2960 210 SLSPGDVVIQNGANSACGQNVIQIARHW-GLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEELRNISRDASIPKPKLA 287 (405)
Q Consensus 210 ~~~~g~~VLI~ga~G~vG~~aiqla~~~-G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d~~~i~~~t~g~g~Dvv 287 (405)
.+++|++||-.|+ |.|..++.+++.. +++++++-.+++..+...+.+++.+.+.+ +-..+..++ .....+|+|
T Consensus 42 ~l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~---~~~~~fDlV 116 (187)
T PRK00107 42 YLPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEF---GQEEKFDVV 116 (187)
T ss_pred hcCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhC---CCCCCccEE
Confidence 4556999999998 4577777777655 56777775444433334455556665432 111222221 113479999
Q ss_pred EECCCc---hhHHHHHHhcccCCEEEEEe
Q psy2960 288 LNCVGG---NSATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 288 ld~~g~---~~~~~~~~~l~~~G~~v~~g 313 (405)
+-.... .....+.++|+++|+++.+-
T Consensus 117 ~~~~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 117 TSRAVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred EEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 964322 23345679999999998873
No 378
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.50 E-value=0.021 Score=52.59 Aligned_cols=75 Identities=15% Similarity=0.217 Sum_probs=48.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eCh---hhHHH-Hhhhc-CCCCCcE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTE---EELRN-ISRDA-SIPKPKL 286 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~---~d~~~-i~~~t-~g~g~Dv 286 (405)
.+.+|+|.||+|++|...++.+...|++|+++.++.+.. +. ..+...+ .|. +++.. +.+.. ..+.+|+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~----~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~ 76 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARA----AP--IPGVELLELDVTDDASVQAAVDEVIARAGRIDV 76 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhc----cc--cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence 357899999999999999999889999999888654321 11 1122222 232 23333 22221 1346899
Q ss_pred EEECCCc
Q psy2960 287 ALNCVGG 293 (405)
Q Consensus 287 vld~~g~ 293 (405)
+|++.|.
T Consensus 77 li~~ag~ 83 (270)
T PRK06179 77 LVNNAGV 83 (270)
T ss_pred EEECCCC
Confidence 9999984
No 379
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=95.48 E-value=0.19 Score=48.49 Aligned_cols=96 Identities=10% Similarity=0.287 Sum_probs=65.9
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHc--CCcEEEEecCCcchHHHHHHHHHcCCcEEeChh--hHHHHh--------------
Q psy2960 215 DVVIQNGANSACGQNVIQIARHW--GLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRNIS-------------- 276 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~--G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~--d~~~i~-------------- 276 (405)
++|.|.|++|.+|..++.+.+.. .+++++.+... ..+...+.+++++...+.-.+ ....++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~-n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGK-NVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCC-CHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 57999999999999999998776 67888887443 345667888889988765322 111122
Q ss_pred ----hhcCCCCCcEEEECCCch-hHHHHHHhcccCCEEEE
Q psy2960 277 ----RDASIPKPKLALNCVGGN-SATNLLRTLVSKGVMVT 311 (405)
Q Consensus 277 ----~~t~g~g~Dvvld~~g~~-~~~~~~~~l~~~G~~v~ 311 (405)
++.....+|+|++++++. .+...+.+++.|-++.+
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL 120 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL 120 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence 222224589999998774 45556777776666554
No 380
>KOG1610|consensus
Probab=95.47 E-value=0.23 Score=46.09 Aligned_cols=80 Identities=13% Similarity=0.123 Sum_probs=56.0
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE--EeC---hhhH---HH-HhhhcCCC
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY--VFT---EEEL---RN-ISRDASIP 282 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~--v~~---~~d~---~~-i~~~t~g~ 282 (405)
-.+.-|+|.|+.+|.|...+.-+...|.+|++.+-+.+..+......+ .+--+ .+| ++++ .+ +++..+..
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~-s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~ 105 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK-SPRLRTLQLDVTKPESVKEAAQWVKKHLGED 105 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc-CCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence 356779999999999999999999999999999966555444333332 12111 122 2332 33 67777778
Q ss_pred CCcEEEECCC
Q psy2960 283 KPKLALNCVG 292 (405)
Q Consensus 283 g~Dvvld~~g 292 (405)
|.--++|+.|
T Consensus 106 gLwglVNNAG 115 (322)
T KOG1610|consen 106 GLWGLVNNAG 115 (322)
T ss_pred cceeEEeccc
Confidence 8889999998
No 381
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.14 Score=45.53 Aligned_cols=76 Identities=14% Similarity=0.159 Sum_probs=46.4
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHc-CCcEE-eChhhHHHHhhhcC-CCCCcEEEEC
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL-GADYV-FTEEELRNISRDAS-IPKPKLALNC 290 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~l-g~~~v-~~~~d~~~i~~~t~-g~g~Dvvld~ 290 (405)
..++||.||+|++|...+..+... ++|+++.++.++.++.. ... +...+ .|-.+...+.+... -.++|.+|.+
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELA---AELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHH---HHhccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 368999999999999999877766 89998887644322111 122 22211 23333222322221 1368999999
Q ss_pred CCc
Q psy2960 291 VGG 293 (405)
Q Consensus 291 ~g~ 293 (405)
.|.
T Consensus 79 ag~ 81 (227)
T PRK08219 79 AGV 81 (227)
T ss_pred CCc
Confidence 874
No 382
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.44 E-value=0.091 Score=48.86 Aligned_cols=93 Identities=17% Similarity=0.160 Sum_probs=55.5
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHHcCCcEEeCh-hhHHHHhhhcCCCCCcEEEE
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTE-EELRNISRDASIPKPKLALN 289 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~~G~-~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~-~d~~~i~~~t~g~g~Dvvld 289 (405)
..+.+|+|.|+ |++|.+++..+...|+ +++++.++.++.+. .+..++....+.. .+..+ . -..+|+|++
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~---l~~~~~~~~~~~~~~~~~~---~--~~~~DivIn 191 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEE---LAKLFGALGKAELDLELQE---E--LADFDLIIN 191 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH---HHHHhhhccceeecccchh---c--cccCCEEEE
Confidence 35789999998 9999999999999995 66666655433222 2223321110111 01111 0 245899999
Q ss_pred CCCchhH------HHHHHhcccCCEEEEEe
Q psy2960 290 CVGGNSA------TNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 290 ~~g~~~~------~~~~~~l~~~G~~v~~g 313 (405)
|+..... .....+++++..++.+-
T Consensus 192 aTp~g~~~~~~~~~~~~~~l~~~~~v~Div 221 (278)
T PRK00258 192 ATSAGMSGELPLPPLPLSLLRPGTIVYDMI 221 (278)
T ss_pred CCcCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence 9875331 11245677777777765
No 383
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.43 E-value=0.014 Score=53.43 Aligned_cols=36 Identities=17% Similarity=0.334 Sum_probs=32.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 248 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~ 248 (405)
+|++|||.|++|++|...++.+...|++|+.+.++.
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~ 43 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSR 43 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCCh
Confidence 578999999999999999999988999999887654
No 384
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=95.43 E-value=0.15 Score=45.99 Aligned_cols=106 Identities=17% Similarity=0.243 Sum_probs=67.5
Q ss_pred HHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCC-cEEEEecCCcchHHHHHHHHHcCCcEE-eChhhHHHHhhhcCCC
Q psy2960 205 LKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYV-FTEEELRNISRDASIP 282 (405)
Q Consensus 205 l~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~-~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d~~~i~~~t~g~ 282 (405)
+....++++|++||=.|+ |.|-.|..+++..|- +|+++--+.+..+.-.+.+.+.|...+ +...|.+.+. ....
T Consensus 43 ~i~~~~~~~g~~vLDva~--GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LP--f~D~ 118 (238)
T COG2226 43 LISLLGIKPGDKVLDVAC--GTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLP--FPDN 118 (238)
T ss_pred HHHhhCCCCCCEEEEecC--CccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCC--CCCC
Confidence 344456679999998886 779999999999974 566654444443434444555554321 1122222211 2245
Q ss_pred CCcEEEECCCc-------hhHHHHHHhcccCCEEEEEec
Q psy2960 283 KPKLALNCVGG-------NSATNLLRTLVSKGVMVTYGG 314 (405)
Q Consensus 283 g~Dvvld~~g~-------~~~~~~~~~l~~~G~~v~~g~ 314 (405)
.||+|.-+.|= ..+.+..|.|+|+|+++.+-.
T Consensus 119 sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~ 157 (238)
T COG2226 119 SFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEF 157 (238)
T ss_pred ccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEc
Confidence 78999887772 234567799999999988864
No 385
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.40 E-value=0.16 Score=44.59 Aligned_cols=99 Identities=16% Similarity=0.123 Sum_probs=58.0
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eChhhHHHHhhhcCCCCCcEE
Q psy2960 209 NSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEELRNISRDASIPKPKLA 287 (405)
Q Consensus 209 ~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d~~~i~~~t~g~g~Dvv 287 (405)
....++.+||-.|+ |.|..+..+|+. |++|+++--+.+..+...+.+...+...+ +...|+.. ..-...+|+|
T Consensus 26 l~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~---~~~~~~fD~I 99 (197)
T PRK11207 26 VKVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNN---LTFDGEYDFI 99 (197)
T ss_pred cccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhh---CCcCCCcCEE
Confidence 34567789999998 458888888875 88888885554433333333334343321 11122221 1113469999
Q ss_pred EECCCc---------hhHHHHHHhcccCCEEEEEe
Q psy2960 288 LNCVGG---------NSATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 288 ld~~g~---------~~~~~~~~~l~~~G~~v~~g 313 (405)
+.+..- ..+....+.|+|+|.++.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~ 134 (197)
T PRK11207 100 LSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 134 (197)
T ss_pred EEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 976431 12234568899999976554
No 386
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.38 E-value=0.12 Score=47.14 Aligned_cols=35 Identities=14% Similarity=0.177 Sum_probs=30.0
Q ss_pred CCCEEEEeCCC--cHHHHHHHHHHHHcCCcEEEEecC
Q psy2960 213 PGDVVIQNGAN--SACGQNVIQIARHWGLKTINIVRN 247 (405)
Q Consensus 213 ~g~~VLI~ga~--G~vG~~aiqla~~~G~~v~~~~~~ 247 (405)
.|.+|||.|++ |++|.+.+..+...|++++.+.++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 46889999998 489999998888889999888765
No 387
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=95.34 E-value=0.087 Score=50.00 Aligned_cols=78 Identities=18% Similarity=0.174 Sum_probs=48.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCC--c-EEe--ChhhHHHHhhhcCCCCCcEE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA--D-YVF--TEEELRNISRDASIPKPKLA 287 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~--~-~v~--~~~d~~~i~~~t~g~g~Dvv 287 (405)
.|.+|||.||+|.+|...+..+...|++|++++++.+............+. . .++ |-.+...+.+.. .++|+|
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~d~v 81 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAI--DGCETV 81 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHH--cCCCEE
Confidence 478999999999999999999999999998887665432221111111111 1 112 333322233322 258999
Q ss_pred EECCC
Q psy2960 288 LNCVG 292 (405)
Q Consensus 288 ld~~g 292 (405)
+.+.|
T Consensus 82 ih~A~ 86 (325)
T PLN02989 82 FHTAS 86 (325)
T ss_pred EEeCC
Confidence 99987
No 388
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.33 E-value=0.19 Score=46.74 Aligned_cols=95 Identities=16% Similarity=0.193 Sum_probs=60.0
Q ss_pred CCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHH
Q psy2960 194 ITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELR 273 (405)
Q Consensus 194 ~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~ 273 (405)
.|+........+....---.|++|+|.|++|-+|...+.++...|++|++ +.+.. .+
T Consensus 139 ~p~T~~gii~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv-~~~~t--------------------~~-- 195 (283)
T PRK14192 139 GSATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTI-CHSRT--------------------QN-- 195 (283)
T ss_pred cCCcHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEE-EeCCc--------------------hh--
Confidence 34444323333333222347999999999555999999999999995444 42211 01
Q ss_pred HHhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEEecc
Q psy2960 274 NISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGM 315 (405)
Q Consensus 274 ~i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~~ 315 (405)
+.+.+ +.+|+|++++|.+... ..+.++++-.++.+|..
T Consensus 196 -L~~~~--~~aDIvI~AtG~~~~v-~~~~lk~gavViDvg~n 233 (283)
T PRK14192 196 -LPELV--KQADIIVGAVGKPELI-KKDWIKQGAVVVDAGFH 233 (283)
T ss_pred -HHHHh--ccCCEEEEccCCCCcC-CHHHcCCCCEEEEEEEe
Confidence 11111 3579999999866532 23668999899998843
No 389
>KOG1208|consensus
Probab=95.31 E-value=0.097 Score=49.42 Aligned_cols=78 Identities=15% Similarity=0.209 Sum_probs=54.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHH-cCCcEEe----Chhh------HHH-HhhhcC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADYVF----TEEE------LRN-ISRDAS 280 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~-lg~~~v~----~~~d------~~~-i~~~t~ 280 (405)
.|.+++|.|+++|+|..++.-+...|++|+.++++.+..++..+...+ .....+. |-.+ |.+ +.+ .
T Consensus 34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~--~ 111 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK--K 111 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh--c
Confidence 568999999999999999999999999999999887554444444443 3333332 3222 233 322 2
Q ss_pred CCCCcEEEECCC
Q psy2960 281 IPKPKLALNCVG 292 (405)
Q Consensus 281 g~g~Dvvld~~g 292 (405)
....|+.|+..|
T Consensus 112 ~~~ldvLInNAG 123 (314)
T KOG1208|consen 112 EGPLDVLINNAG 123 (314)
T ss_pred CCCccEEEeCcc
Confidence 567899999887
No 390
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.29 E-value=0.092 Score=47.65 Aligned_cols=78 Identities=12% Similarity=0.142 Sum_probs=47.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE-Ee--Ch---hhHHH-Hhhh--cCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--TE---EELRN-ISRD--ASIPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~-v~--~~---~d~~~-i~~~--t~g~g 283 (405)
.+.++||.|++|++|...+..+...|++++.+.++.+.. ..+....++... ++ |- ++... +.+. ..+.+
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDA--AEALADELGDRAIALQADVTDREQVQAMFATATEHFGKP 81 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHH--HHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 357899999999999999999989999998876543221 122223343221 11 22 22222 2221 11334
Q ss_pred CcEEEECCC
Q psy2960 284 PKLALNCVG 292 (405)
Q Consensus 284 ~Dvvld~~g 292 (405)
+|+++.+.|
T Consensus 82 id~li~~ag 90 (253)
T PRK08642 82 ITTVVNNAL 90 (253)
T ss_pred CeEEEECCC
Confidence 999999876
No 391
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=95.26 E-value=0.08 Score=50.21 Aligned_cols=38 Identities=21% Similarity=0.289 Sum_probs=33.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcc
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD 250 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~ 250 (405)
.|.+|||.||+|.+|...+..+...|.+|++++++.+.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 41 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTD 41 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcc
Confidence 57899999999999999999888899999988876554
No 392
>PRK07023 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.097 Score=47.33 Aligned_cols=34 Identities=18% Similarity=0.319 Sum_probs=30.4
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 249 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~ 249 (405)
++||.|++|++|...++.+...|++++.++++.+
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~ 36 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRH 36 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcc
Confidence 6999999999999999998889999998887643
No 393
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=95.23 E-value=0.11 Score=48.44 Aligned_cols=92 Identities=9% Similarity=0.064 Sum_probs=58.2
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eChhhHHHHhhhc----CCCC-CcEEEE
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEELRNISRDA----SIPK-PKLALN 289 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d~~~i~~~t----~g~g-~Dvvld 289 (405)
+|||.||+|.+|...++.+...|.+|.+++++.+.. ...+...+ .|..|.+.+.+.. .-.| +|.++-
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~-------~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~ 73 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSS-------AGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYL 73 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccc-------cCCCCccccccCCCHHHHHHHHhcccCcCCceeEEEE
Confidence 489999999999999999999999999999876531 11233222 3444433332222 1245 899987
Q ss_pred CCCch-----hHHHHHHhcccCC--EEEEEec
Q psy2960 290 CVGGN-----SATNLLRTLVSKG--VMVTYGG 314 (405)
Q Consensus 290 ~~g~~-----~~~~~~~~l~~~G--~~v~~g~ 314 (405)
+.+.. .....++.++..| +||.++.
T Consensus 74 ~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 74 VAPPIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred eCCCCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 77631 2223455554444 7887764
No 394
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.23 E-value=0.83 Score=40.76 Aligned_cols=92 Identities=8% Similarity=-0.062 Sum_probs=59.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 292 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g 292 (405)
.|.+|||.|| |.++.-=+..+...||+|.+++- +-.++..+++ +.|.-... .+++.. .. -.++++||-|++
T Consensus 24 ~~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap--~i~~el~~l~-~~~~i~~~-~r~~~~-~d---l~g~~LViaATd 94 (223)
T PRK05562 24 NKIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSK--KFSKEFLDLK-KYGNLKLI-KGNYDK-EF---IKDKHLIVIATD 94 (223)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC--CCCHHHHHHH-hCCCEEEE-eCCCCh-HH---hCCCcEEEECCC
Confidence 5789999999 99998888888889999888862 2233333333 22322222 222222 01 146899999999
Q ss_pred chhHHHHH-HhcccCCEEEEEe
Q psy2960 293 GNSATNLL-RTLVSKGVMVTYG 313 (405)
Q Consensus 293 ~~~~~~~~-~~l~~~G~~v~~g 313 (405)
.+.+...+ ...+..+.++...
T Consensus 95 D~~vN~~I~~~a~~~~~lvn~v 116 (223)
T PRK05562 95 DEKLNNKIRKHCDRLYKLYIDC 116 (223)
T ss_pred CHHHHHHHHHHHHHcCCeEEEc
Confidence 98887765 4445557666655
No 395
>KOG1502|consensus
Probab=95.22 E-value=0.1 Score=49.05 Aligned_cols=74 Identities=20% Similarity=0.298 Sum_probs=53.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCC-c---EEe--C---hhhHHHHhhhcCCCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA-D---YVF--T---EEELRNISRDASIPK 283 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~-~---~v~--~---~~d~~~i~~~t~g~g 283 (405)
.+.+|+|.||+|=+|...+..+...|++|.+++|+.++ ++..+.++++.. . .++ | ++.+.. . -.|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~-~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~---a--i~g 78 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPED-EKKTEHLRKLEGAKERLKLFKADLLDEGSFDK---A--IDG 78 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcch-hhhHHHHHhcccCcccceEEeccccccchHHH---H--HhC
Confidence 57899999999999999999999999999999999876 444455666652 1 122 1 222333 2 136
Q ss_pred CcEEEECCC
Q psy2960 284 PKLALNCVG 292 (405)
Q Consensus 284 ~Dvvld~~g 292 (405)
.|.||-+..
T Consensus 79 cdgVfH~As 87 (327)
T KOG1502|consen 79 CDGVFHTAS 87 (327)
T ss_pred CCEEEEeCc
Confidence 888887664
No 396
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.19 E-value=0.18 Score=46.64 Aligned_cols=94 Identities=12% Similarity=0.167 Sum_probs=68.1
Q ss_pred ccCCCcHHHHHHHHHhhcCC-CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChh
Q psy2960 192 SGITSNPCTAYRMLKDYNSL-SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE 270 (405)
Q Consensus 192 a~~~~~~~ta~~al~~~~~~-~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~ 270 (405)
..+||+....+..|.. -++ -.|.+|+|.|.++-+|.-.+.++...|++|+..-+. . .
T Consensus 136 ~~~PcTp~aii~lL~~-~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~-t--------------------~ 193 (285)
T PRK14189 136 LFRPCTPYGVMKMLES-IGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK-T--------------------R 193 (285)
T ss_pred CCcCCCHHHHHHHHHH-cCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC-C--------------------C
Confidence 3567776666666655 344 379999999998888999999999999988765321 1 1
Q ss_pred hHHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEEec
Q psy2960 271 ELRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGG 314 (405)
Q Consensus 271 d~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~ 314 (405)
+..+ + +..|+|+-++|.+.+... +.++++-.++.+|.
T Consensus 194 ~l~~~~------~~ADIVV~avG~~~~i~~-~~ik~gavVIDVGi 231 (285)
T PRK14189 194 DLAAHT------RQADIVVAAVGKRNVLTA-DMVKPGATVIDVGM 231 (285)
T ss_pred CHHHHh------hhCCEEEEcCCCcCccCH-HHcCCCCEEEEccc
Confidence 1122 2 245999999998765433 88999999999984
No 397
>KOG1200|consensus
Probab=95.17 E-value=0.12 Score=44.45 Aligned_cols=74 Identities=20% Similarity=0.309 Sum_probs=52.4
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCC--cEE-e--C---hhh----HHH-HhhhcC
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA--DYV-F--T---EEE----LRN-ISRDAS 280 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~--~~v-~--~---~~d----~~~-i~~~t~ 280 (405)
...++|.|++.|+|.+..|.....||++.+..... ....+.++.+|. +|. | | .+| +++ ++.+
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~---~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~-- 88 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDS---AAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSL-- 88 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecch---hhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhc--
Confidence 45689999999999999999999999998886433 334566777776 444 2 1 223 233 3322
Q ss_pred CCCCcEEEECCCc
Q psy2960 281 IPKPKLALNCVGG 293 (405)
Q Consensus 281 g~g~Dvvld~~g~ 293 (405)
+.+++++||.|-
T Consensus 89 -g~psvlVncAGI 100 (256)
T KOG1200|consen 89 -GTPSVLVNCAGI 100 (256)
T ss_pred -CCCcEEEEcCcc
Confidence 378999999983
No 398
>KOG1207|consensus
Probab=95.16 E-value=0.041 Score=46.29 Aligned_cols=77 Identities=19% Similarity=0.242 Sum_probs=51.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCC---cEEeChhhHHHHhhh-cCCCCCcEEE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA---DYVFTEEELRNISRD-ASIPKPKLAL 288 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~---~~v~~~~d~~~i~~~-t~g~g~Dvvl 288 (405)
.|..|++.|+.-|+|...++-+...|++|+++++.++. .....++-.. ..+.|-.+++.+.+. -.-..+|-.+
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~---L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLV 82 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEAN---LLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLV 82 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHH---HHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhh
Confidence 58899999999999999999999999999999977644 3344444332 122344555443332 2223456666
Q ss_pred ECCC
Q psy2960 289 NCVG 292 (405)
Q Consensus 289 d~~g 292 (405)
|..|
T Consensus 83 NNAg 86 (245)
T KOG1207|consen 83 NNAG 86 (245)
T ss_pred ccch
Confidence 6665
No 399
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.11 Score=47.00 Aligned_cols=34 Identities=26% Similarity=0.317 Sum_probs=29.8
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 248 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~ 248 (405)
.+++|.|++|++|...+..+...|++|+.+.++.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~ 35 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQ 35 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCH
Confidence 5799999999999998888888999998887654
No 400
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.10 E-value=0.33 Score=43.63 Aligned_cols=103 Identities=13% Similarity=0.191 Sum_probs=62.0
Q ss_pred HHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc--EEEEecCC----cch-----HHHHHHHHHcCCcEEeChh
Q psy2960 202 YRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK--TINIVRNR----DDI-----DKLKSYLKSLGADYVFTEE 270 (405)
Q Consensus 202 ~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~--v~~~~~~~----~~~-----~~~~~~~~~lg~~~v~~~~ 270 (405)
+.++.....--.+.+|+|.|+ |+.|.+++..+...|++ .+.++++. ..+ ++..++++.++... .+ .
T Consensus 13 ~~al~~~g~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~-~ 89 (226)
T cd05311 13 LNALKLVGKKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG-G 89 (226)
T ss_pred HHHHHHhCCCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc-C
Confidence 344444322236789999999 99999999998899997 66665443 111 12234445543221 11 1
Q ss_pred hHHH-HhhhcCCCCCcEEEECCCchhH-HHHHHhcccCCEEEEEe
Q psy2960 271 ELRN-ISRDASIPKPKLALNCVGGNSA-TNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 271 d~~~-i~~~t~g~g~Dvvld~~g~~~~-~~~~~~l~~~G~~v~~g 313 (405)
++.+ + .++|++|++++...+ ...++.++++..+..+.
T Consensus 90 ~l~~~l------~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 90 TLKEAL------KGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred CHHHHH------hcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 2222 3 247999999974333 35567777777666554
No 401
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=95.08 E-value=0.49 Score=41.08 Aligned_cols=96 Identities=19% Similarity=0.174 Sum_probs=55.0
Q ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHHHc-C-CcEEEEecCCcchHHHHHHHHHcCCcEE-eChhhH--HH-HhhhcCC
Q psy2960 208 YNSLSPGDVVIQNGANSACGQNVIQIARHW-G-LKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEEL--RN-ISRDASI 281 (405)
Q Consensus 208 ~~~~~~g~~VLI~ga~G~vG~~aiqla~~~-G-~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d~--~~-i~~~t~g 281 (405)
...+++|++||..|+ |. |..+..+++.. + .+++++--++ . + ...+.+.+ .|..+. .+ +.+.+..
T Consensus 27 ~~~i~~g~~VLDiG~-Gt-G~~~~~l~~~~~~~~~v~~vDis~-~---~----~~~~i~~~~~d~~~~~~~~~l~~~~~~ 96 (188)
T TIGR00438 27 FKLIKPGDTVLDLGA-AP-GGWSQVAVEQVGGKGRVIAVDLQP-M---K----PIENVDFIRGDFTDEEVLNKIRERVGD 96 (188)
T ss_pred hcccCCCCEEEEecC-CC-CHHHHHHHHHhCCCceEEEEeccc-c---c----cCCCceEEEeeCCChhHHHHHHHHhCC
Confidence 456789999999998 44 44555555554 3 3566654332 1 1 11233322 132221 22 4455556
Q ss_pred CCCcEEEE-CC----Cc-------------hhHHHHHHhcccCCEEEEEe
Q psy2960 282 PKPKLALN-CV----GG-------------NSATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 282 ~g~Dvvld-~~----g~-------------~~~~~~~~~l~~~G~~v~~g 313 (405)
.++|+|+. .. |. ..+..+.++|+++|+++...
T Consensus 97 ~~~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 97 DKVDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred CCccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 68999995 21 21 23345678999999998754
No 402
>PLN00016 RNA-binding protein; Provisional
Probab=95.07 E-value=0.19 Score=48.89 Aligned_cols=98 Identities=14% Similarity=0.113 Sum_probs=63.6
Q ss_pred CCEEEEe----CCCcHHHHHHHHHHHHcCCcEEEEecCCcchHH-------HHHHHHHcCCcEEe-ChhhHHHHhhhcCC
Q psy2960 214 GDVVIQN----GANSACGQNVIQIARHWGLKTINIVRNRDDIDK-------LKSYLKSLGADYVF-TEEELRNISRDASI 281 (405)
Q Consensus 214 g~~VLI~----ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~-------~~~~~~~lg~~~v~-~~~d~~~i~~~t~g 281 (405)
..+|||. ||+|-+|...+..+...|.+|++++++.+.... +...+...|...+. |..|...+. ..
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~---~~ 128 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV---AG 128 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh---cc
Confidence 4689999 999999999999998999999999977543111 01122234554443 444433321 24
Q ss_pred CCCcEEEECCCchh--HHHHHHhcccCC--EEEEEec
Q psy2960 282 PKPKLALNCVGGNS--ATNLLRTLVSKG--VMVTYGG 314 (405)
Q Consensus 282 ~g~Dvvld~~g~~~--~~~~~~~l~~~G--~~v~~g~ 314 (405)
.++|+|+++.+.+. ....++.++..| +||.++.
T Consensus 129 ~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 129 AGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred CCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 57999999987543 234456555443 7888775
No 403
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.04 E-value=0.14 Score=46.84 Aligned_cols=33 Identities=12% Similarity=0.172 Sum_probs=29.5
Q ss_pred CCCEEEEeCCC--cHHHHHHHHHHHHcCCcEEEEe
Q psy2960 213 PGDVVIQNGAN--SACGQNVIQIARHWGLKTINIV 245 (405)
Q Consensus 213 ~g~~VLI~ga~--G~vG~~aiqla~~~G~~v~~~~ 245 (405)
+|.++||.|++ +++|.+.+..+...|++|+.+.
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~ 39 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTY 39 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEe
Confidence 58899999998 4899999999999999998874
No 404
>KOG1210|consensus
Probab=95.03 E-value=0.13 Score=47.66 Aligned_cols=81 Identities=14% Similarity=0.117 Sum_probs=53.6
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcE----E-------eChhhHHH-Hhhh
Q psy2960 211 LSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY----V-------FTEEELRN-ISRD 278 (405)
Q Consensus 211 ~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~----v-------~~~~d~~~-i~~~ 278 (405)
-+|-..|+|.|++.|+|++.+..++..|+.|..++++.++. .+..+.+.... | .+++..+. +.+.
T Consensus 30 ~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl---~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l 106 (331)
T KOG1210|consen 30 PKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKL---LEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEEL 106 (331)
T ss_pred cCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHH---HHHHhhhhhhhccceeeEeccccccHHHHHHHHhhh
Confidence 34558999999999999999999999999999999876553 33333333211 1 12222222 3322
Q ss_pred cC-CCCCcEEEECCCch
Q psy2960 279 AS-IPKPKLALNCVGGN 294 (405)
Q Consensus 279 t~-g~g~Dvvld~~g~~ 294 (405)
-. ...+|.+|.|.|..
T Consensus 107 ~~~~~~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 107 RDLEGPIDNLFCCAGVA 123 (331)
T ss_pred hhccCCcceEEEecCcc
Confidence 11 24689999999853
No 405
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=94.99 E-value=0.096 Score=49.86 Aligned_cols=76 Identities=11% Similarity=0.063 Sum_probs=45.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcC--CcEEEEecCCcchHHHHHHHHHcCC---cEE-eChhhHHHHhhhcCCCCCcE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWG--LKTINIVRNRDDIDKLKSYLKSLGA---DYV-FTEEELRNISRDASIPKPKL 286 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G--~~v~~~~~~~~~~~~~~~~~~~lg~---~~v-~~~~d~~~i~~~t~g~g~Dv 286 (405)
.|.+|||.||+|.+|...+..+...| .+|+++.++..... +....+.. ..+ .|-.|...+.+.. .++|+
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~---~~~~~~~~~~~~~v~~Dl~d~~~l~~~~--~~iD~ 77 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQW---EMQQKFPAPCLRFFIGDVRDKERLTRAL--RGVDY 77 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHH---HHHHHhCCCcEEEEEccCCCHHHHHHHH--hcCCE
Confidence 47899999999999999998877765 57776654432211 11222221 111 2434433333332 25899
Q ss_pred EEECCCc
Q psy2960 287 ALNCVGG 293 (405)
Q Consensus 287 vld~~g~ 293 (405)
||.+.|.
T Consensus 78 Vih~Ag~ 84 (324)
T TIGR03589 78 VVHAAAL 84 (324)
T ss_pred EEECccc
Confidence 9998873
No 406
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=94.99 E-value=0.12 Score=49.65 Aligned_cols=78 Identities=15% Similarity=0.148 Sum_probs=48.6
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCc-EEe--ChhhHHHHhhhcCCCCCcEEE
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD-YVF--TEEELRNISRDASIPKPKLAL 288 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~-~v~--~~~d~~~i~~~t~g~g~Dvvl 288 (405)
..+.+|||.|++|.+|...++.+...|.+|+++.++.+..+...+.+.. +.. .++ |-.+...+.+.. .++|+||
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~--~~~d~Vi 84 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAV--KGCDGVF 84 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHH--cCCCEEE
Confidence 4678999999999999999999999999999887654332221111111 211 112 222322233322 2579999
Q ss_pred ECCC
Q psy2960 289 NCVG 292 (405)
Q Consensus 289 d~~g 292 (405)
.+.+
T Consensus 85 h~A~ 88 (353)
T PLN02896 85 HVAA 88 (353)
T ss_pred ECCc
Confidence 9886
No 407
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=94.97 E-value=0.28 Score=44.12 Aligned_cols=101 Identities=20% Similarity=0.235 Sum_probs=65.0
Q ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCC--cEEEEecCCcchHHHHHHHHHcCCcEEeC--hhhHHHHhhhcCCCC
Q psy2960 208 YNSLSPGDVVIQNGANSACGQNVIQIARHWGL--KTINIVRNRDDIDKLKSYLKSLGADYVFT--EEELRNISRDASIPK 283 (405)
Q Consensus 208 ~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~--~v~~~~~~~~~~~~~~~~~~~lg~~~v~~--~~d~~~i~~~t~g~g 283 (405)
.+++.||++|+=.|. |.|.+++-||++.|. +|+..-...+..+..++.++++|....+. ..|.. +...+..
T Consensus 89 ~~gi~pg~rVlEAGt--GSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~---~~~~~~~ 163 (256)
T COG2519 89 RLGISPGSRVLEAGT--GSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVR---EGIDEED 163 (256)
T ss_pred HcCCCCCCEEEEccc--CchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecccc---ccccccc
Confidence 379999999988776 669999999998876 45554333333333445555555533221 23332 2222347
Q ss_pred CcEEEECCCc--hhHHHHHHhcccCCEEEEEe
Q psy2960 284 PKLALNCVGG--NSATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 284 ~Dvvld~~g~--~~~~~~~~~l~~~G~~v~~g 313 (405)
+|.|+=-... +.+..+.+.|+++|.++.+.
T Consensus 164 vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~ 195 (256)
T COG2519 164 VDAVFLDLPDPWNVLEHVSDALKPGGVVVVYS 195 (256)
T ss_pred cCEEEEcCCChHHHHHHHHHHhCCCcEEEEEc
Confidence 8987654544 45567889999999999885
No 408
>PRK07578 short chain dehydrogenase; Provisional
Probab=94.94 E-value=0.34 Score=42.29 Aligned_cols=60 Identities=17% Similarity=0.222 Sum_probs=39.7
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChh---hHHH-HhhhcCCCCCcEEEECC
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE---ELRN-ISRDASIPKPKLALNCV 291 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~---d~~~-i~~~t~g~g~Dvvld~~ 291 (405)
++||.|++|++|.+.+..+... ++++.+.++.+ ....|-. +... +.+. .++|+++++.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~--------------~~~~D~~~~~~~~~~~~~~---~~id~lv~~a 63 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG--------------DVQVDITDPASIRALFEKV---GKVDAVVSAA 63 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC--------------ceEecCCChHHHHHHHHhc---CCCCEEEECC
Confidence 6899999999999888777666 88888775432 1122322 2333 3222 3689999988
Q ss_pred Cc
Q psy2960 292 GG 293 (405)
Q Consensus 292 g~ 293 (405)
|.
T Consensus 64 g~ 65 (199)
T PRK07578 64 GK 65 (199)
T ss_pred CC
Confidence 73
No 409
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.94 E-value=0.18 Score=47.62 Aligned_cols=86 Identities=20% Similarity=0.271 Sum_probs=55.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 292 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g 292 (405)
.|.+|.|.|. |.+|...++.++.+|+++++..++.+.. -+.+......+++++. ...|+|+.++.
T Consensus 135 ~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~---------~~~~~~~~~~~l~e~l-----~~aDvvv~~lP 199 (312)
T PRK15469 135 EDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSW---------PGVQSFAGREELSAFL-----SQTRVLINLLP 199 (312)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCC---------CCceeecccccHHHHH-----hcCCEEEECCC
Confidence 5899999999 9999999999999999998876443210 1222222222233311 23588887776
Q ss_pred ch-hH-----HHHHHhcccCCEEEEEe
Q psy2960 293 GN-SA-----TNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 293 ~~-~~-----~~~~~~l~~~G~~v~~g 313 (405)
.. .. ...++.|+++..+|.+|
T Consensus 200 lt~~T~~li~~~~l~~mk~ga~lIN~a 226 (312)
T PRK15469 200 NTPETVGIINQQLLEQLPDGAYLLNLA 226 (312)
T ss_pred CCHHHHHHhHHHHHhcCCCCcEEEECC
Confidence 32 11 12467778877777776
No 410
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=94.92 E-value=0.038 Score=44.64 Aligned_cols=94 Identities=16% Similarity=0.226 Sum_probs=54.8
Q ss_pred EEEEeCCCcHHHHHHHHHHHH-cCCcEEEEecCCcc--hHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCC
Q psy2960 216 VVIQNGANSACGQNVIQIARH-WGLKTINIVRNRDD--IDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 292 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~-~G~~v~~~~~~~~~--~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g 292 (405)
+|+|+|++|-+|.+.++.+.. -+.++.+.+.+.+. ..+-...+...+...+.-+++.+++.+ .+|++||++.
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~-----~~DVvIDfT~ 76 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLE-----EADVVIDFTN 76 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTT-----H-SEEEEES-
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcc-----cCCEEEEcCC
Confidence 689999999999999999988 68888888755431 000001111111111111233333211 2799999997
Q ss_pred chhHHHHHHhcccCCEEEEEec
Q psy2960 293 GNSATNLLRTLVSKGVMVTYGG 314 (405)
Q Consensus 293 ~~~~~~~~~~l~~~G~~v~~g~ 314 (405)
.+.....++.+.+.|.-+.+|.
T Consensus 77 p~~~~~~~~~~~~~g~~~ViGT 98 (124)
T PF01113_consen 77 PDAVYDNLEYALKHGVPLVIGT 98 (124)
T ss_dssp HHHHHHHHHHHHHHT-EEEEE-
T ss_pred hHHhHHHHHHHHhCCCCEEEEC
Confidence 6666677776666687777774
No 411
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=94.90 E-value=0.8 Score=40.54 Aligned_cols=93 Identities=10% Similarity=0.120 Sum_probs=63.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 292 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g 292 (405)
.|.+|||.|+ |.+|.-=+.+....|++++++...- .++...+....+... +. +.+.. ..+ .++++|+-+++
T Consensus 11 ~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~--~~el~~~~~~~~i~~-~~-~~~~~-~~~---~~~~lviaAt~ 81 (210)
T COG1648 11 EGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEF--EPELKALIEEGKIKW-IE-REFDA-EDL---DDAFLVIAATD 81 (210)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCc--cHHHHHHHHhcCcch-hh-cccCh-hhh---cCceEEEEeCC
Confidence 5789999999 9999999999999999999887443 244444444433221 11 22221 111 23799999999
Q ss_pred chhHHHH-HHhcccCCEEEEEec
Q psy2960 293 GNSATNL-LRTLVSKGVMVTYGG 314 (405)
Q Consensus 293 ~~~~~~~-~~~l~~~G~~v~~g~ 314 (405)
.+.+... .+...+.+.++....
T Consensus 82 d~~ln~~i~~~a~~~~i~vNv~D 104 (210)
T COG1648 82 DEELNERIAKAARERRILVNVVD 104 (210)
T ss_pred CHHHHHHHHHHHHHhCCceeccC
Confidence 9888754 577788888887764
No 412
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.87 E-value=0.32 Score=45.02 Aligned_cols=95 Identities=15% Similarity=0.115 Sum_probs=68.8
Q ss_pred ccCCCcHHHHHHHHHhhcCCC-CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChh
Q psy2960 192 SGITSNPCTAYRMLKDYNSLS-PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE 270 (405)
Q Consensus 192 a~~~~~~~ta~~al~~~~~~~-~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~ 270 (405)
..+||+....+..+.. .++. .|.+|+|.|.+.-+|.-...++...||+|++.-+.. .
T Consensus 137 ~~~PcTp~av~~ll~~-~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T---------------------~ 194 (285)
T PRK10792 137 LLRPCTPRGIMTLLER-YGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFT---------------------K 194 (285)
T ss_pred CCCCCCHHHHHHHHHH-cCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCC---------------------C
Confidence 3467777767766655 3443 699999999988899999999999999887663211 1
Q ss_pred hHHHHhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEEec
Q psy2960 271 ELRNISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGG 314 (405)
Q Consensus 271 d~~~i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~ 314 (405)
+..+ . -+..|+++.++|.+.+... +.++++-.++.+|-
T Consensus 195 ~l~~---~--~~~ADIvi~avG~p~~v~~-~~vk~gavVIDvGi 232 (285)
T PRK10792 195 NLRH---H--VRNADLLVVAVGKPGFIPG-EWIKPGAIVIDVGI 232 (285)
T ss_pred CHHH---H--HhhCCEEEEcCCCcccccH-HHcCCCcEEEEccc
Confidence 1222 1 1246999999998776332 77899999999983
No 413
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=94.86 E-value=0.23 Score=46.26 Aligned_cols=32 Identities=25% Similarity=0.367 Sum_probs=27.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEe
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIV 245 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~ 245 (405)
.+++|+|.|+ ||.+.+++.-+...|++.+.++
T Consensus 126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~ 157 (283)
T PRK14027 126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVA 157 (283)
T ss_pred CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEE
Confidence 4789999999 9999999988888999765555
No 414
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=94.81 E-value=0.065 Score=49.82 Aligned_cols=31 Identities=19% Similarity=0.324 Sum_probs=28.2
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEec
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVR 246 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~ 246 (405)
+|||.|++|.+|...++.+...|.+|+++.+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r 31 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTS 31 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCC
Confidence 4899999999999999999999999988864
No 415
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=94.80 E-value=0.12 Score=49.45 Aligned_cols=78 Identities=12% Similarity=0.108 Sum_probs=47.8
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcch-HHHHHHHH-Hc------CCcEE-eChhhHHHHhhhcCCCCCc
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDI-DKLKSYLK-SL------GADYV-FTEEELRNISRDASIPKPK 285 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~-~~~~~~~~-~l------g~~~v-~~~~d~~~i~~~t~g~g~D 285 (405)
++|||.||+|.+|...++.+...|.+|+++.++.+.. ..+.+... .. +...+ .|-.|...+.+...+.++|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 4799999999999999999999999999988664311 11122111 11 12222 2333332233332234689
Q ss_pred EEEECCC
Q psy2960 286 LALNCVG 292 (405)
Q Consensus 286 vvld~~g 292 (405)
+|+.+.+
T Consensus 81 ~ViH~Aa 87 (343)
T TIGR01472 81 EIYNLAA 87 (343)
T ss_pred EEEECCc
Confidence 9999886
No 416
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=94.80 E-value=0.13 Score=47.37 Aligned_cols=33 Identities=12% Similarity=0.201 Sum_probs=29.5
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecC
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGLKTINIVRN 247 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~ 247 (405)
.+++|.||++++|.+.++.+...|++|+.+.++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~ 34 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHR 34 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCC
Confidence 368999999999999999999999999888654
No 417
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=94.79 E-value=0.39 Score=44.84 Aligned_cols=77 Identities=16% Similarity=0.234 Sum_probs=42.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEe-cCCcchHHHHHHHHHcCCc-----EEeChhhHHHHhhhcCCCCCcE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIV-RNRDDIDKLKSYLKSLGAD-----YVFTEEELRNISRDASIPKPKL 286 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~-~~~~~~~~~~~~~~~lg~~-----~v~~~~d~~~i~~~t~g~g~Dv 286 (405)
.|.++||.|+ ||.+.+++..+...|++.+.++ ++.+..++..+++..++.. .+...++...+.+. ...+|+
T Consensus 123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~--~~~aDi 199 (288)
T PRK12749 123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEA--LASADI 199 (288)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhh--cccCCE
Confidence 6789999999 8889887777777898655554 4432112222333333221 12222211112211 246899
Q ss_pred EEECCC
Q psy2960 287 ALNCVG 292 (405)
Q Consensus 287 vld~~g 292 (405)
|+||+.
T Consensus 200 vINaTp 205 (288)
T PRK12749 200 LTNGTK 205 (288)
T ss_pred EEECCC
Confidence 999885
No 418
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=94.79 E-value=0.27 Score=43.89 Aligned_cols=94 Identities=15% Similarity=0.137 Sum_probs=56.6
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhH--HHHhhhcCCCCCcEEEE
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEEL--RNISRDASIPKPKLALN 289 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~--~~i~~~t~g~g~Dvvld 289 (405)
-+|.+||=.||+| |+.+.-+|+ +|++|+++--+++..+.....+.+-|.. +|++.. +++... +..||+|+.
T Consensus 58 l~g~~vLDvGCGg--G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~--~~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCGG--GILSEPLAR-LGASVTGIDASEKPIEVAKLHALESGVN--IDYRQATVEDLASA--GGQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCCc--cHhhHHHHH-CCCeeEEecCChHHHHHHHHhhhhcccc--ccchhhhHHHHHhc--CCCccEEEE
Confidence 3899999999954 565555554 5799999865544333333333344443 445432 223222 478999985
Q ss_pred -----CCCch--hHHHHHHhcccCCEEEEE
Q psy2960 290 -----CVGGN--SATNLLRTLVSKGVMVTY 312 (405)
Q Consensus 290 -----~~g~~--~~~~~~~~l~~~G~~v~~ 312 (405)
-+..+ .+.++.++++|+|.+..-
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 33332 334567999999987653
No 419
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=94.78 E-value=0.087 Score=47.26 Aligned_cols=77 Identities=16% Similarity=0.216 Sum_probs=48.2
Q ss_pred EEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHHcCCcE-E--eChhh---HHH-Hhhhc-CCCCCcEE
Q psy2960 217 VIQNGANSACGQNVIQIARHWGLKTINIVRNRD-DIDKLKSYLKSLGADY-V--FTEEE---LRN-ISRDA-SIPKPKLA 287 (405)
Q Consensus 217 VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~-~~~~~~~~~~~lg~~~-v--~~~~d---~~~-i~~~t-~g~g~Dvv 287 (405)
|||.|++|++|...+..+...|++++.+.++.+ ..+...+...+.|... + .|-.+ ... +.+.. .-.++|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 589999999999999999889999988876642 2222334444555422 1 23222 222 22111 12468999
Q ss_pred EECCCc
Q psy2960 288 LNCVGG 293 (405)
Q Consensus 288 ld~~g~ 293 (405)
+.+.|.
T Consensus 81 i~~ag~ 86 (239)
T TIGR01830 81 VNNAGI 86 (239)
T ss_pred EECCCC
Confidence 998884
No 420
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=94.76 E-value=0.31 Score=42.94 Aligned_cols=35 Identities=26% Similarity=0.223 Sum_probs=30.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 248 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~ 248 (405)
...+|+|.|+ |++|..+++.+...|...+.+++.+
T Consensus 20 ~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence 4578999999 9999999999999999888877654
No 421
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=94.71 E-value=0.24 Score=43.95 Aligned_cols=101 Identities=21% Similarity=0.219 Sum_probs=59.8
Q ss_pred hhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eChhhHHH-HhhhcCCCCC
Q psy2960 207 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEELRN-ISRDASIPKP 284 (405)
Q Consensus 207 ~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d~~~-i~~~t~g~g~ 284 (405)
...+++++++||-.|+ |.|..+..+++.. .+++++-.+++..+...+.+...|.+.+ +...|... .. ....+
T Consensus 72 ~~l~~~~~~~VLeiG~--GsG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---~~~~f 145 (212)
T PRK00312 72 ELLELKPGDRVLEIGT--GSGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWP---AYAPF 145 (212)
T ss_pred HhcCCCCCCEEEEECC--CccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCCC---cCCCc
Confidence 3467889999999998 4466666666664 4666665443333333344445555432 11122111 11 12468
Q ss_pred cEEEECCCchhH-HHHHHhcccCCEEEEEe
Q psy2960 285 KLALNCVGGNSA-TNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 285 Dvvld~~g~~~~-~~~~~~l~~~G~~v~~g 313 (405)
|+|+-...-... ....+.|+++|+++..-
T Consensus 146 D~I~~~~~~~~~~~~l~~~L~~gG~lv~~~ 175 (212)
T PRK00312 146 DRILVTAAAPEIPRALLEQLKEGGILVAPV 175 (212)
T ss_pred CEEEEccCchhhhHHHHHhcCCCcEEEEEE
Confidence 998865544444 34579999999988754
No 422
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=94.71 E-value=0.2 Score=45.10 Aligned_cols=76 Identities=17% Similarity=0.202 Sum_probs=47.2
Q ss_pred EEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc-chHHHHHHHHHcCCcE-E--eChh---hHHH-Hhhh-cCCCCCcEE
Q psy2960 217 VIQNGANSACGQNVIQIARHWGLKTINIVRNRD-DIDKLKSYLKSLGADY-V--FTEE---ELRN-ISRD-ASIPKPKLA 287 (405)
Q Consensus 217 VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~-~~~~~~~~~~~lg~~~-v--~~~~---d~~~-i~~~-t~g~g~Dvv 287 (405)
|||.|++|++|...++.+...|++++.+.++.+ ..+...+.+++.+.+. + .|-. +... +.+. .....+|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 689999999999999999999999988876533 2223334444445322 1 2322 2222 2221 113468999
Q ss_pred EECCC
Q psy2960 288 LNCVG 292 (405)
Q Consensus 288 ld~~g 292 (405)
+.+.|
T Consensus 81 i~~ag 85 (239)
T TIGR01831 81 VLNAG 85 (239)
T ss_pred EECCC
Confidence 98876
No 423
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=94.70 E-value=0.089 Score=50.34 Aligned_cols=36 Identities=19% Similarity=0.329 Sum_probs=32.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 248 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~ 248 (405)
++.+|||.||+|.+|...++.+...|.+|+++.++.
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~ 40 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRS 40 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeccc
Confidence 468999999999999999999999999999987653
No 424
>PLN02244 tocopherol O-methyltransferase
Probab=94.69 E-value=0.17 Score=48.51 Aligned_cols=98 Identities=15% Similarity=0.183 Sum_probs=60.8
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCc-EE-eChhhHHHHhhhcCCCCCcEEEE
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD-YV-FTEEELRNISRDASIPKPKLALN 289 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~-~v-~~~~d~~~i~~~t~g~g~Dvvld 289 (405)
+++++||=.|+ |.|..+..+++..|++++++.-+++..+...+.+...|.. .+ +-..|...+. .....+|+|+.
T Consensus 117 ~~~~~VLDiGC--G~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~~--~~~~~FD~V~s 192 (340)
T PLN02244 117 KRPKRIVDVGC--GIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQP--FEDGQFDLVWS 192 (340)
T ss_pred CCCCeEEEecC--CCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccCC--CCCCCccEEEE
Confidence 78999999998 5688888999988999998875544333333334444432 11 1111211110 11346899986
Q ss_pred CCCc-------hhHHHHHHhcccCCEEEEEe
Q psy2960 290 CVGG-------NSATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 290 ~~g~-------~~~~~~~~~l~~~G~~v~~g 313 (405)
.... ..+.+..+.|+|||+++...
T Consensus 193 ~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~ 223 (340)
T PLN02244 193 MESGEHMPDKRKFVQELARVAAPGGRIIIVT 223 (340)
T ss_pred CCchhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 4432 23345679999999998865
No 425
>PLN02928 oxidoreductase family protein
Probab=94.67 E-value=0.14 Score=49.11 Aligned_cols=93 Identities=15% Similarity=0.195 Sum_probs=56.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHH-----HHHHHcCCcEEeChhhHHH-HhhhcCCCCCcE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLK-----SYLKSLGADYVFTEEELRN-ISRDASIPKPKL 286 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~-----~~~~~lg~~~v~~~~d~~~-i~~~t~g~g~Dv 286 (405)
.|.+|+|.|. |.+|..+++.++.+|++|++..++........ .....+.. ......++++ +. ..|+
T Consensus 158 ~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~ell~------~aDi 229 (347)
T PLN02928 158 FGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVD-EKGGHEDIYEFAG------EADI 229 (347)
T ss_pred CCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhcccccccccccc-ccCcccCHHHHHh------hCCE
Confidence 5899999999 99999999999999999988865422100000 00000000 0011223333 22 3588
Q ss_pred EEECCCch-h----H-HHHHHhcccCCEEEEEe
Q psy2960 287 ALNCVGGN-S----A-TNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 287 vld~~g~~-~----~-~~~~~~l~~~G~~v~~g 313 (405)
|+.++... . + ...+..|+++..||.++
T Consensus 230 Vvl~lPlt~~T~~li~~~~l~~Mk~ga~lINva 262 (347)
T PLN02928 230 VVLCCTLTKETAGIVNDEFLSSMKKGALLVNIA 262 (347)
T ss_pred EEECCCCChHhhcccCHHHHhcCCCCeEEEECC
Confidence 88877631 1 1 23578888888888776
No 426
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=94.65 E-value=0.13 Score=50.16 Aligned_cols=89 Identities=15% Similarity=0.191 Sum_probs=49.4
Q ss_pred EEEeCCCcHHHHHHHHHHHHcCC--cEEEEecCCcchHHHHHHHH-H-cC--Cc-EEeChhhHHHHhhhcCCCCCcEEEE
Q psy2960 217 VIQNGANSACGQNVIQIARHWGL--KTINIVRNRDDIDKLKSYLK-S-LG--AD-YVFTEEELRNISRDASIPKPKLALN 289 (405)
Q Consensus 217 VLI~ga~G~vG~~aiqla~~~G~--~v~~~~~~~~~~~~~~~~~~-~-lg--~~-~v~~~~d~~~i~~~t~g~g~Dvvld 289 (405)
|+|.|+ |.+|..+++.+...+- +++++.++.+ +.+.+. + .+ .. ..+|..|.+++.++. .+.|+|||
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~----~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~--~~~dvVin 73 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPE----KAERLAEKLLGDRVEAVQVDVNDPESLAELL--RGCDVVIN 73 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHH----HHHHHHT--TTTTEEEEE--TTTHHHHHHHH--TTSSEEEE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHH----HHHHHHhhccccceeEEEEecCCHHHHHHHH--hcCCEEEE
Confidence 789999 9999999999887764 4555544432 222222 2 22 22 223444433344442 34599999
Q ss_pred CCCchhHHHHH-HhcccCCEEEEE
Q psy2960 290 CVGGNSATNLL-RTLVSKGVMVTY 312 (405)
Q Consensus 290 ~~g~~~~~~~~-~~l~~~G~~v~~ 312 (405)
|+|.......+ .|+..+-.++..
T Consensus 74 ~~gp~~~~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 74 CAGPFFGEPVARACIEAGVHYVDT 97 (386)
T ss_dssp -SSGGGHHHHHHHHHHHT-EEEES
T ss_pred CCccchhHHHHHHHHHhCCCeecc
Confidence 99977554444 566667777773
No 427
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=94.61 E-value=0.25 Score=44.44 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=30.2
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 248 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~ 248 (405)
++|||.|++|++|..+++.....|++|+.+.++.
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~ 36 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSG 36 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCc
Confidence 4799999999999999998888899999988664
No 428
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.60 E-value=0.38 Score=44.49 Aligned_cols=94 Identities=17% Similarity=0.191 Sum_probs=67.8
Q ss_pred ccCCCcHHHHHHHHHhhcCCC-CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChh
Q psy2960 192 SGITSNPCTAYRMLKDYNSLS-PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE 270 (405)
Q Consensus 192 a~~~~~~~ta~~al~~~~~~~-~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~ 270 (405)
+.+||+....+..|.. -++. .|.+|+|.|.+.-||.-.+.++...||+|.+.- +.. .
T Consensus 135 ~~~PcTp~avi~lL~~-~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~h-s~t--------------------~ 192 (285)
T PRK14191 135 GFVPATPMGVMRLLKH-YHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCH-ILT--------------------K 192 (285)
T ss_pred CCCCCcHHHHHHHHHH-hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEe-CCc--------------------H
Confidence 4567777766666654 3543 699999999988999999999999999987652 211 1
Q ss_pred hHHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEEec
Q psy2960 271 ELRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGG 314 (405)
Q Consensus 271 d~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~ 314 (405)
+..+ ++ ..|+|+-++|.+.+.. -+.+++|..++.+|.
T Consensus 193 ~l~~~~~------~ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi 230 (285)
T PRK14191 193 DLSFYTQ------NADIVCVGVGKPDLIK-ASMVKKGAVVVDIGI 230 (285)
T ss_pred HHHHHHH------hCCEEEEecCCCCcCC-HHHcCCCcEEEEeec
Confidence 1112 22 3599999999876632 356799999999984
No 429
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=94.55 E-value=0.27 Score=43.76 Aligned_cols=97 Identities=10% Similarity=0.016 Sum_probs=57.6
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHH-HHcCCcEEe---------ChhhH---HH-Hh
Q psy2960 211 LSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYVF---------TEEEL---RN-IS 276 (405)
Q Consensus 211 ~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~-~~lg~~~v~---------~~~d~---~~-i~ 276 (405)
+.+|.+||+.|+ |.|.-++.+|. .|.+|+++--++.. ++.+ .+.+..... ...+. .. +.
T Consensus 32 ~~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD~S~~A----i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 104 (213)
T TIGR03840 32 LPAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVELSEIA----VEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFF 104 (213)
T ss_pred CCCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEeCCHHH----HHHHHHHcCCCcceeccccceeeecCceEEEEccCC
Confidence 357889999999 67899999985 69999999654433 3332 223321100 00000 00 11
Q ss_pred hhc--CCCCCcEEEECCCc---------hhHHHHHHhcccCCEEEEEec
Q psy2960 277 RDA--SIPKPKLALNCVGG---------NSATNLLRTLVSKGVMVTYGG 314 (405)
Q Consensus 277 ~~t--~g~g~Dvvld~~g~---------~~~~~~~~~l~~~G~~v~~g~ 314 (405)
+.. ....+|.|+|+..- ..+....++|+|+|+++.++.
T Consensus 105 ~~~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 105 ALTAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred CCCcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 111 12358999997531 123456799999999777763
No 430
>PLN02214 cinnamoyl-CoA reductase
Probab=94.55 E-value=0.16 Score=48.82 Aligned_cols=80 Identities=15% Similarity=0.137 Sum_probs=49.6
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHH-HHHHHHHcCCc-EEe--ChhhHHHHhhhcCCCCCcEE
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDK-LKSYLKSLGAD-YVF--TEEELRNISRDASIPKPKLA 287 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~-~~~~~~~lg~~-~v~--~~~d~~~i~~~t~g~g~Dvv 287 (405)
.++.+|||.||+|.+|...+..+...|.+|++++++.+.... .+..+...+.. .++ |-.+...+.+.. .++|+|
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~V 85 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAI--DGCDGV 85 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHH--hcCCEE
Confidence 357899999999999999999999999999999876543111 11111111111 112 323322233222 258999
Q ss_pred EECCCc
Q psy2960 288 LNCVGG 293 (405)
Q Consensus 288 ld~~g~ 293 (405)
|.+.+.
T Consensus 86 ih~A~~ 91 (342)
T PLN02214 86 FHTASP 91 (342)
T ss_pred EEecCC
Confidence 999863
No 431
>PLN00015 protochlorophyllide reductase
Probab=94.54 E-value=0.16 Score=47.99 Aligned_cols=76 Identities=13% Similarity=0.073 Sum_probs=45.2
Q ss_pred EEeCCCcHHHHHHHHHHHHcC-CcEEEEecCCcchHHHHHHHHHcCCcE---EeChhh---HHH-Hhhhc-CCCCCcEEE
Q psy2960 218 IQNGANSACGQNVIQIARHWG-LKTINIVRNRDDIDKLKSYLKSLGADY---VFTEEE---LRN-ISRDA-SIPKPKLAL 288 (405)
Q Consensus 218 LI~ga~G~vG~~aiqla~~~G-~~v~~~~~~~~~~~~~~~~~~~lg~~~---v~~~~d---~~~-i~~~t-~g~g~Dvvl 288 (405)
||.|+++|+|.++++.+...| ++|+.+.++.++.+...+.+...+... ..|-.+ ... +.+.. ...++|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 589999999999998888899 899888766443222222221112111 123222 222 22221 135689999
Q ss_pred ECCCc
Q psy2960 289 NCVGG 293 (405)
Q Consensus 289 d~~g~ 293 (405)
++.|.
T Consensus 81 nnAG~ 85 (308)
T PLN00015 81 CNAAV 85 (308)
T ss_pred ECCCc
Confidence 98873
No 432
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=94.52 E-value=0.48 Score=39.48 Aligned_cols=94 Identities=17% Similarity=0.154 Sum_probs=56.3
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcC-CcEEEEecCCcchHHHHHHHHHcCCcE-EeChhhHHHHhhhcCCCCCcEEEE
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARHWG-LKTINIVRNRDDIDKLKSYLKSLGADY-VFTEEELRNISRDASIPKPKLALN 289 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~~G-~~v~~~~~~~~~~~~~~~~~~~lg~~~-v~~~~d~~~i~~~t~g~g~Dvvld 289 (405)
..+.+|+|.|+ |++|...++.+...| .+++++.++.+. ..+.+.+++... .....+..+. -.++|+|+.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEK---AKALAERFGELGIAIAYLDLEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHH---HHHHHHHHhhcccceeecchhhc-----cccCCEEEe
Confidence 45789999998 999999999988887 455555443322 233344554321 0111122221 246899999
Q ss_pred CCCchhH-----HHHHHhcccCCEEEEEec
Q psy2960 290 CVGGNSA-----TNLLRTLVSKGVMVTYGG 314 (405)
Q Consensus 290 ~~g~~~~-----~~~~~~l~~~G~~v~~g~ 314 (405)
|++.... ......++++..++.++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~ 117 (155)
T cd01065 88 TTPVGMKPGDELPLPPSLLKPGGVVYDVVY 117 (155)
T ss_pred CcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence 9987542 112345667777777653
No 433
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=94.52 E-value=0.12 Score=49.61 Aligned_cols=78 Identities=8% Similarity=0.104 Sum_probs=46.0
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHc--CCc--E-EeChhhHHHHhhhcCCCCCcEEEE
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL--GAD--Y-VFTEEELRNISRDASIPKPKLALN 289 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~l--g~~--~-v~~~~d~~~i~~~t~g~g~Dvvld 289 (405)
.+|||.||+|.+|...++.+...|.+++++++..+.... ......+ +.. . ..|-.|...+.+.....++|+||+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGN-LMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccc-hhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 379999999999999999999999987766543322111 1111111 111 1 123333222333322346899999
Q ss_pred CCCc
Q psy2960 290 CVGG 293 (405)
Q Consensus 290 ~~g~ 293 (405)
+.|.
T Consensus 81 ~A~~ 84 (355)
T PRK10217 81 LAAE 84 (355)
T ss_pred CCcc
Confidence 9863
No 434
>PLN02366 spermidine synthase
Probab=94.47 E-value=0.49 Score=44.58 Aligned_cols=96 Identities=19% Similarity=0.157 Sum_probs=55.3
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHH----cC----CcEE-eChhhHHH-HhhhcCC
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS----LG----ADYV-FTEEELRN-ISRDASI 281 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~----lg----~~~v-~~~~d~~~-i~~~t~g 281 (405)
...++|||.|+ |. |..+..++++-+...+.++.-+ +.-.+.+++ .+ ..++ +-..|... +.+ +.+
T Consensus 90 ~~pkrVLiIGg-G~-G~~~rellk~~~v~~V~~VEiD---~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~-~~~ 163 (308)
T PLN02366 90 PNPKKVLVVGG-GD-GGVLREIARHSSVEQIDICEID---KMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKN-APE 163 (308)
T ss_pred CCCCeEEEEcC-Cc-cHHHHHHHhCCCCCeEEEEECC---HHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhh-ccC
Confidence 45789999998 33 6778888888777667776333 222344333 21 0111 11123222 332 224
Q ss_pred CCCcEEEECCCc-----------hhHHHHHHhcccCCEEEEEe
Q psy2960 282 PKPKLALNCVGG-----------NSATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 282 ~g~Dvvld~~g~-----------~~~~~~~~~l~~~G~~v~~g 313 (405)
..+|+||--... +....+.++|+++|.++.-+
T Consensus 164 ~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 164 GTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred CCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 569998853322 23445678999999997644
No 435
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=94.43 E-value=0.33 Score=42.54 Aligned_cols=99 Identities=9% Similarity=0.004 Sum_probs=55.9
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEE
Q psy2960 209 NSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLAL 288 (405)
Q Consensus 209 ~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvl 288 (405)
....++.+||-.|+ |.|..+..+|+ .|++|+++--+++..+...+.+...+........|.... .. ...+|+|+
T Consensus 26 ~~~~~~~~vLDiGc--G~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~-~~--~~~fD~I~ 99 (195)
T TIGR00477 26 VKTVAPCKTLDLGC--GQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLPLRTDAYDINAA-AL--NEDYDFIF 99 (195)
T ss_pred hccCCCCcEEEeCC--CCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCCceeEeccchhc-cc--cCCCCEEE
Confidence 34556679999998 66888888887 588888885444332222233333333211111121110 11 23689998
Q ss_pred ECCC-----c----hhHHHHHHhcccCCEEEEEe
Q psy2960 289 NCVG-----G----NSATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 289 d~~g-----~----~~~~~~~~~l~~~G~~v~~g 313 (405)
.+.- . ..+....+.|+|+|.++.+.
T Consensus 100 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~ 133 (195)
T TIGR00477 100 STVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVA 133 (195)
T ss_pred EecccccCCHHHHHHHHHHHHHHhCCCcEEEEEE
Confidence 6532 1 12234568899999966554
No 436
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=94.41 E-value=1.4 Score=40.77 Aligned_cols=148 Identities=15% Similarity=0.166 Sum_probs=89.5
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeC-------------hhhHHH--
Q psy2960 210 SLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFT-------------EEELRN-- 274 (405)
Q Consensus 210 ~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~-------------~~d~~~-- 274 (405)
+--++.+|++.|+ |-+|++++..++..|+-|... +-+.++.+..+++|+...-- +.++..
T Consensus 160 gtv~pA~vlv~G~-Gvagl~aiata~~lG~iVt~r----dlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q 234 (356)
T COG3288 160 GTVSPAKVLVIGA-GVAGLAAIATAVRLGAIVTAR----DLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQ 234 (356)
T ss_pred ccccchhhhhhhH-HHHHHHHHHHHhhcceEEehh----hhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHH
Confidence 4456788999999 999999999999999855443 34455566667777754321 122211
Q ss_pred ---HhhhcCCCCCcEEEECC---Cc--hh--HHHHHHhcccCCEEEEEeccCCCCcc--cCcccccccCeEEEEEec-ch
Q psy2960 275 ---ISRDASIPKPKLALNCV---GG--NS--ATNLLRTLVSKGVMVTYGGMSREPVQ--IPTSAFIFKDITLRGHWM-TR 341 (405)
Q Consensus 275 ---i~~~t~g~g~Dvvld~~---g~--~~--~~~~~~~l~~~G~~v~~g~~~~~~~~--~~~~~~~~k~~~~~g~~~-~~ 341 (405)
+.+. -.++|+||-+. |. +. ..+.++.|+||..++.+..-.+.+.. .+..-....++++.|..- ..
T Consensus 235 ~~~~a~~--~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nlp~ 312 (356)
T COG3288 235 AELVAEQ--AKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNLPG 312 (356)
T ss_pred HHHHHHH--hcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCcch
Confidence 2222 46789999876 22 22 23568999999999999865444433 233334457788888542 11
Q ss_pred hhhhhccHHHHHHHHHHHHHHHHc
Q psy2960 342 WQKENKESAERKSMMNELTEMMRT 365 (405)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~ 365 (405)
....+. ...+.+.+-.+++++-+
T Consensus 313 r~a~~a-S~LYa~Nl~~~l~ll~~ 335 (356)
T COG3288 313 RLAAQA-SQLYATNLVNLLKLLCK 335 (356)
T ss_pred hhhhhH-HHHHHHHHHHHHHHHhc
Confidence 111111 13444555555555443
No 437
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.39 E-value=0.21 Score=49.88 Aligned_cols=74 Identities=22% Similarity=0.292 Sum_probs=48.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC-cchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR-DDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCV 291 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~-~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~ 291 (405)
.+.+|+|.|+ |++|++++..+...|++|+++.... +..++..+.+.++|...+.... ..+. ..++|+|+.+.
T Consensus 4 ~~k~v~iiG~-g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~-----~~~~d~vv~~~ 76 (450)
T PRK14106 4 KGKKVLVVGA-GVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEY-PEEF-----LEGVDLVVVSP 76 (450)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCc-chhH-----hhcCCEEEECC
Confidence 4789999999 6799999999999999988876543 1222233445566665332111 1111 23589999998
Q ss_pred Cc
Q psy2960 292 GG 293 (405)
Q Consensus 292 g~ 293 (405)
|.
T Consensus 77 g~ 78 (450)
T PRK14106 77 GV 78 (450)
T ss_pred CC
Confidence 84
No 438
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=94.38 E-value=0.29 Score=47.53 Aligned_cols=75 Identities=11% Similarity=0.043 Sum_probs=47.7
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eChhhHHHHhhhcCCCCCcEEEEC
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEELRNISRDASIPKPKLALNC 290 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d~~~i~~~t~g~g~Dvvld~ 290 (405)
..+.+|||.|++|-+|...+..+...|.+|+++.+..+.. ... ..++...+ .|-.+...+.... .++|+||.+
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~---~~~-~~~~~~~~~~Dl~d~~~~~~~~--~~~D~Vih~ 92 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH---MSE-DMFCHEFHLVDLRVMENCLKVT--KGVDHVFNL 92 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc---ccc-ccccceEEECCCCCHHHHHHHH--hCCCEEEEc
Confidence 4678999999999999999999999999999987543210 110 01122211 2333333232221 368999999
Q ss_pred CC
Q psy2960 291 VG 292 (405)
Q Consensus 291 ~g 292 (405)
.+
T Consensus 93 Aa 94 (370)
T PLN02695 93 AA 94 (370)
T ss_pred cc
Confidence 85
No 439
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=94.37 E-value=0.17 Score=40.56 Aligned_cols=93 Identities=13% Similarity=0.204 Sum_probs=55.3
Q ss_pred EEEEeCCCcHHHHHHHHHHHHc-CCcEEEEecCCcchHHHHHHHHH-c-CC-cEEeChhhHHHHhhhcCCCCCcEEEECC
Q psy2960 216 VVIQNGANSACGQNVIQIARHW-GLKTINIVRNRDDIDKLKSYLKS-L-GA-DYVFTEEELRNISRDASIPKPKLALNCV 291 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~-G~~v~~~~~~~~~~~~~~~~~~~-l-g~-~~v~~~~d~~~i~~~t~g~g~Dvvld~~ 291 (405)
+|.|.|++|-+|...++++... .++.+.++++.......+..... . +. +..+...+.+.+ ..+|+||.|+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~Dvvf~a~ 74 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEEL------SDVDVVFLAL 74 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHH------TTESEEEE-S
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHh------hcCCEEEecC
Confidence 6899999999999999887664 66777777655411111222211 1 11 112211111112 4689999999
Q ss_pred CchhHHHHH-HhcccCCEEEEEec
Q psy2960 292 GGNSATNLL-RTLVSKGVMVTYGG 314 (405)
Q Consensus 292 g~~~~~~~~-~~l~~~G~~v~~g~ 314 (405)
+.....+.. ..+.++-+++..+.
T Consensus 75 ~~~~~~~~~~~~~~~g~~ViD~s~ 98 (121)
T PF01118_consen 75 PHGASKELAPKLLKAGIKVIDLSG 98 (121)
T ss_dssp CHHHHHHHHHHHHHTTSEEEESSS
T ss_pred chhHHHHHHHHHhhCCcEEEeCCH
Confidence 998777665 44566667777653
No 440
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=94.32 E-value=0.043 Score=50.38 Aligned_cols=37 Identities=19% Similarity=0.316 Sum_probs=32.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 249 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~ 249 (405)
.+.++||.|++|++|.+.++.+...|++|+.+.++.+
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~ 44 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGG 44 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4789999999999999999999999999988875543
No 441
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=94.31 E-value=0.16 Score=47.86 Aligned_cols=78 Identities=9% Similarity=0.054 Sum_probs=45.0
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcC-CcEE-eChhhHHHHhhhcCCCCCcEEEECCCc
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLG-ADYV-FTEEELRNISRDASIPKPKLALNCVGG 293 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg-~~~v-~~~~d~~~i~~~t~g~g~Dvvld~~g~ 293 (405)
+|||.||+|.+|...++.+...|.+|+++.+...............+ ...+ .|..+...+.+.....++|+|+++.|.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 58999999999999999998899998876432221111222211111 1111 232222222222223478999999873
No 442
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=94.30 E-value=0.57 Score=38.59 Aligned_cols=94 Identities=7% Similarity=0.050 Sum_probs=65.6
Q ss_pred ccCCCcHHHHHHHHHhhcCC-CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChh
Q psy2960 192 SGITSNPCTAYRMLKDYNSL-SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE 270 (405)
Q Consensus 192 a~~~~~~~ta~~al~~~~~~-~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~ 270 (405)
..+|+........+... ++ -.|++|+|+|.+..+|.-++.++...|+++..+-+.. +
T Consensus 6 ~~~p~t~~a~~~ll~~~-~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t-~-------------------- 63 (140)
T cd05212 6 LFVSPVAKAVKELLNKE-GVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT-I-------------------- 63 (140)
T ss_pred cccccHHHHHHHHHHHc-CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC-c--------------------
Confidence 35565655555555543 43 3799999999999999999999999999887774221 1
Q ss_pred hHHH-HhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEEec
Q psy2960 271 ELRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGG 314 (405)
Q Consensus 271 d~~~-i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~ 314 (405)
+..+ + +..|+|+-++|..... --+.+++|-.++.+|.
T Consensus 64 ~l~~~v------~~ADIVvsAtg~~~~i-~~~~ikpGa~Vidvg~ 101 (140)
T cd05212 64 QLQSKV------HDADVVVVGSPKPEKV-PTEWIKPGATVINCSP 101 (140)
T ss_pred CHHHHH------hhCCEEEEecCCCCcc-CHHHcCCCCEEEEcCC
Confidence 1111 2 2469999999987432 1466899988887773
No 443
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=94.30 E-value=0.39 Score=41.46 Aligned_cols=49 Identities=16% Similarity=0.246 Sum_probs=33.9
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC-c---chHHHHHHHHHcCCc
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNR-D---DIDKLKSYLKSLGAD 264 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~-~---~~~~~~~~~~~lg~~ 264 (405)
++||.|+.|++|+..++.+...|+..++.++.. . .....++.+++.|..
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~ 54 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGAR 54 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-E
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCc
Confidence 689999999999999998888887655555443 1 223456666677764
No 444
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=94.28 E-value=0.18 Score=50.72 Aligned_cols=79 Identities=16% Similarity=0.243 Sum_probs=55.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc-----------------chHHHHHHHHHcCCcEEeChhhHHH-
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD-----------------DIDKLKSYLKSLGADYVFTEEELRN- 274 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~-----------------~~~~~~~~~~~lg~~~v~~~~d~~~- 274 (405)
.+++|+|.|+ |+.|+.++..++..|.+|++.-.... ..+...+.++++|.+..++..-...
T Consensus 140 ~~~~V~IIG~-GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 218 (467)
T TIGR01318 140 TGKRVAVIGA-GPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDI 218 (467)
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCcc
Confidence 6899999999 99999999999999999876643221 0123467788899877666421111
Q ss_pred -HhhhcCCCCCcEEEECCCch
Q psy2960 275 -ISRDASIPKPKLALNCVGGN 294 (405)
Q Consensus 275 -i~~~t~g~g~Dvvld~~g~~ 294 (405)
+...+ .++|.||.++|..
T Consensus 219 ~~~~~~--~~~D~vilAtGa~ 237 (467)
T TIGR01318 219 SLDDLL--EDYDAVFLGVGTY 237 (467)
T ss_pred CHHHHH--hcCCEEEEEeCCC
Confidence 22222 3689999999964
No 445
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.28 E-value=0.5 Score=43.72 Aligned_cols=77 Identities=17% Similarity=0.218 Sum_probs=46.9
Q ss_pred HHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCc-EEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhc
Q psy2960 201 AYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDA 279 (405)
Q Consensus 201 a~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~-v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t 279 (405)
.+.+|.. .+...+++|+|.|+ ||.+.+++..+..+|+. ++++.++.++. .+.+..++.+ .. ..+.
T Consensus 110 f~~~L~~-~~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a---~~la~~~~~~----~~--~~~~--- 175 (272)
T PRK12550 110 IAKLLAS-YQVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTG---KALAELYGYE----WR--PDLG--- 175 (272)
T ss_pred HHHHHHh-cCCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHH---HHHHHHhCCc----ch--hhcc---
Confidence 3444544 34455679999999 99999999999999997 44554443322 2233334321 10 0011
Q ss_pred CCCCCcEEEECCC
Q psy2960 280 SIPKPKLALNCVG 292 (405)
Q Consensus 280 ~g~g~Dvvld~~g 292 (405)
...+|+||||+.
T Consensus 176 -~~~~dlvINaTp 187 (272)
T PRK12550 176 -GIEADILVNVTP 187 (272)
T ss_pred -cccCCEEEECCc
Confidence 235799999985
No 446
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=94.28 E-value=0.65 Score=41.51 Aligned_cols=103 Identities=12% Similarity=0.118 Sum_probs=61.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcc-----hHHHHHHHHHcC---------------C-cEEeChhh
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-----IDKLKSYLKSLG---------------A-DYVFTEEE 271 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~-----~~~~~~~~~~lg---------------~-~~v~~~~d 271 (405)
..++|+|.|. ||||.+++..+-..|+..+..++-++- .+.........| . -+|.-.++
T Consensus 29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~ 107 (263)
T COG1179 29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND 107 (263)
T ss_pred hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence 4578999999 999999999999999988887643321 111222211222 1 11211223
Q ss_pred H--HH-HhhhcCCCCCcEEEECCCchhHHHH-HH-hcccCCEEEEEeccCC
Q psy2960 272 L--RN-ISRDASIPKPKLALNCVGGNSATNL-LR-TLVSKGVMVTYGGMSR 317 (405)
Q Consensus 272 ~--~~-i~~~t~g~g~Dvvld~~g~~~~~~~-~~-~l~~~G~~v~~g~~~~ 317 (405)
+ ++ +.++. ..++|+|+||...-....+ +. |.+.+=.++..++..+
T Consensus 108 f~t~en~~~~~-~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~ 157 (263)
T COG1179 108 FITEENLEDLL-SKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG 157 (263)
T ss_pred hhCHhHHHHHh-cCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence 2 22 44444 3489999999987665533 33 5555556777765443
No 447
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=94.27 E-value=0.28 Score=44.57 Aligned_cols=104 Identities=14% Similarity=0.213 Sum_probs=61.7
Q ss_pred hhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCC--cEEEEecCCcchHHHHHHHHHcCCc--EEeChhhHHH--HhhhcC
Q psy2960 207 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGL--KTINIVRNRDDIDKLKSYLKSLGAD--YVFTEEELRN--ISRDAS 280 (405)
Q Consensus 207 ~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~--~v~~~~~~~~~~~~~~~~~~~lg~~--~v~~~~d~~~--i~~~t~ 280 (405)
...+++||++|+=.|. |.|.++..+|+..|. +|+..-..++..+...+.++..|.+ ..+..+|..+ ..+..
T Consensus 34 ~~l~i~pG~~VlEaGt--GSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~~~- 110 (247)
T PF08704_consen 34 MRLDIRPGSRVLEAGT--GSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDEEL- 110 (247)
T ss_dssp HHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--STT--
T ss_pred HHcCCCCCCEEEEecC--CcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccccccc-
Confidence 4479999999988776 568999999998874 5666543333333334455566653 2244455432 21111
Q ss_pred CCCCcEEEECCCc--hhHHHHHHhc-ccCCEEEEEe
Q psy2960 281 IPKPKLALNCVGG--NSATNLLRTL-VSKGVMVTYG 313 (405)
Q Consensus 281 g~g~Dvvld~~g~--~~~~~~~~~l-~~~G~~v~~g 313 (405)
...+|.||==+.. +.+..+.+.| +++|+++.+.
T Consensus 111 ~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fs 146 (247)
T PF08704_consen 111 ESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFS 146 (247)
T ss_dssp TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEE
T ss_pred cCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEEC
Confidence 2467887654544 4567788999 8999999986
No 448
>PRK07041 short chain dehydrogenase; Provisional
Probab=94.26 E-value=0.18 Score=44.97 Aligned_cols=73 Identities=14% Similarity=0.064 Sum_probs=45.1
Q ss_pred EEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCc-EEe--ChhhH---HHHhhhcCCCCCcEEEECC
Q psy2960 218 IQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD-YVF--TEEEL---RNISRDASIPKPKLALNCV 291 (405)
Q Consensus 218 LI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~-~v~--~~~d~---~~i~~~t~g~g~Dvvld~~ 291 (405)
||.|++|++|.+.++.+...|++++.+.++.+..+...+..+ .+.. +++ |..+. ..+.+. -+.+|+++++.
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~--~~~id~li~~a 77 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALG-GGAPVRTAALDITDEAAVDAFFAE--AGPFDHVVITA 77 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHh--cCCCCEEEECC
Confidence 589999999999999998999999888876443222222221 1221 222 33332 222222 24689999998
Q ss_pred Cc
Q psy2960 292 GG 293 (405)
Q Consensus 292 g~ 293 (405)
|.
T Consensus 78 g~ 79 (230)
T PRK07041 78 AD 79 (230)
T ss_pred CC
Confidence 73
No 449
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=94.24 E-value=0.31 Score=45.30 Aligned_cols=64 Identities=22% Similarity=0.339 Sum_probs=51.5
Q ss_pred HHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeC
Q psy2960 202 YRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFT 268 (405)
Q Consensus 202 ~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~ 268 (405)
..+..+ +.++||+ .+|-+.+|..|.+.+.+|+.+|++.+.+.-. ....++.+.++.+|++.+..
T Consensus 51 ~~Ae~~-G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~-~~S~er~~~l~a~GAevi~t 114 (300)
T COG0031 51 EDAEKR-GLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPE-TMSQERRKLLRALGAEVILT 114 (300)
T ss_pred HHHHHc-CCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCC-CCCHHHHHHHHHcCCEEEEc
Confidence 344433 7799999 5678888999999999999999999888843 45678889999999987764
No 450
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=94.22 E-value=0.25 Score=47.46 Aligned_cols=48 Identities=17% Similarity=0.154 Sum_probs=38.9
Q ss_pred HHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q psy2960 200 TAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 248 (405)
Q Consensus 200 ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~ 248 (405)
|||.-++....+ ++.+|||.||+|-+|...+..+...|.+|+++.+..
T Consensus 2 ~~~~~~~~~~~~-~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~ 49 (348)
T PRK15181 2 TAYEELRTKLVL-APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFS 49 (348)
T ss_pred chhhhhhhcccc-cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 567766654444 457999999999999999999999999999887643
No 451
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=94.05 E-value=0.18 Score=47.36 Aligned_cols=33 Identities=24% Similarity=0.427 Sum_probs=28.9
Q ss_pred EEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc
Q psy2960 217 VIQNGANSACGQNVIQIARHWGLKTINIVRNRD 249 (405)
Q Consensus 217 VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~ 249 (405)
|||.||+|-+|...++.+...|.++++++++.+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~ 34 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLK 34 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCC
Confidence 799999999999999999889998888876543
No 452
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=94.04 E-value=0.34 Score=44.20 Aligned_cols=44 Identities=23% Similarity=0.313 Sum_probs=31.3
Q ss_pred EEEEeCCCcHHHHHHHHHHHH----cCCcEEEEecCCcchHHHHHHHH
Q psy2960 216 VVIQNGANSACGQNVIQIARH----WGLKTINIVRNRDDIDKLKSYLK 259 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~----~G~~v~~~~~~~~~~~~~~~~~~ 259 (405)
.+||.|+++++|.+.+..+.. .|++|+.+.++.+..++..+.++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~ 49 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIG 49 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHH
Confidence 589999999999987765443 79999998876554433333333
No 453
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=93.98 E-value=0.74 Score=40.50 Aligned_cols=79 Identities=20% Similarity=0.225 Sum_probs=50.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHH-HHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSY-LKSLGADYVFTEEELRNISRDASIPKPKLALNCV 291 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~-~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~ 291 (405)
.|.+|+|.|. |.+|..+++.+...|++|+++..+ ..+.+. ...+|+. .++.+++ . ...+|+++.|.
T Consensus 27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~----~~~~~~~~~~~g~~-~v~~~~l---~----~~~~Dv~vp~A 93 (200)
T cd01075 27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADIN----EEAVARAAELFGAT-VVAPEEI---Y----SVDADVFAPCA 93 (200)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCC----HHHHHHHHHHcCCE-EEcchhh---c----cccCCEEEecc
Confidence 6789999999 899999999999999999855332 222333 3344654 3333221 1 12578888766
Q ss_pred CchhH-HHHHHhcc
Q psy2960 292 GGNSA-TNLLRTLV 304 (405)
Q Consensus 292 g~~~~-~~~~~~l~ 304 (405)
.+..+ ...++.++
T Consensus 94 ~~~~I~~~~~~~l~ 107 (200)
T cd01075 94 LGGVINDDTIPQLK 107 (200)
T ss_pred cccccCHHHHHHcC
Confidence 54433 34455554
No 454
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=93.97 E-value=2.1 Score=38.60 Aligned_cols=34 Identities=12% Similarity=0.150 Sum_probs=29.7
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 248 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~ 248 (405)
..+|+|.|+ ||+|..++..+-..|...+.+++.+
T Consensus 11 ~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 11 NAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 468999999 9999999999999999888887654
No 455
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=93.93 E-value=0.49 Score=44.25 Aligned_cols=95 Identities=14% Similarity=0.103 Sum_probs=59.6
Q ss_pred CEEEEeCCCcHHHHH-HHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCCc
Q psy2960 215 DVVIQNGANSACGQN-VIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVGG 293 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~-aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g~ 293 (405)
-+|.|.|. |.+|.. +..+.+.-++++.++++.+... ..+..++++|....+ ++++.+.+......+|+||++++.
T Consensus 5 lrVAIIGt-G~IGt~hm~~l~~~~~velvAVvdid~es-~gla~A~~~Gi~~~~--~~ie~LL~~~~~~dIDiVf~AT~a 80 (302)
T PRK08300 5 LKVAIIGS-GNIGTDLMIKILRSEHLEPGAMVGIDPES-DGLARARRLGVATSA--EGIDGLLAMPEFDDIDIVFDATSA 80 (302)
T ss_pred CeEEEEcC-cHHHHHHHHHHhcCCCcEEEEEEeCChhh-HHHHHHHHcCCCccc--CCHHHHHhCcCCCCCCEEEECCCH
Confidence 46899996 999987 4555555578999988764332 234567788865433 233332222112569999999998
Q ss_pred hhHHHHHHhcccCCEEEEEe
Q psy2960 294 NSATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 294 ~~~~~~~~~l~~~G~~v~~g 313 (405)
..-......+.+.|..+..-
T Consensus 81 ~~H~e~a~~a~eaGk~VID~ 100 (302)
T PRK08300 81 GAHVRHAAKLREAGIRAIDL 100 (302)
T ss_pred HHHHHHHHHHHHcCCeEEEC
Confidence 76555554445555554443
No 456
>KOG1252|consensus
Probab=93.93 E-value=0.33 Score=45.38 Aligned_cols=60 Identities=20% Similarity=0.328 Sum_probs=52.5
Q ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeC
Q psy2960 208 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFT 268 (405)
Q Consensus 208 ~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~ 268 (405)
.+.+.||.++||-.-+|..|.+.+.++...|++++++... ....+|...++++|+..|..
T Consensus 97 ~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~-~ms~Ek~~~l~a~Gaeii~t 156 (362)
T KOG1252|consen 97 KGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPE-KMSKEKRILLRALGAEIILT 156 (362)
T ss_pred cCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEech-hhhHHHHHHHHHcCCEEEec
Confidence 3789999999999999999999999999999999999843 45677889999999987763
No 457
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=93.92 E-value=0.55 Score=46.56 Aligned_cols=102 Identities=16% Similarity=0.122 Sum_probs=60.5
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHcC-CcEEEEecCCcchHHHHHHHHHcCCcE-E--eChhhHHHHhhhcCCCCC
Q psy2960 209 NSLSPGDVVIQNGANSACGQNVIQIARHWG-LKTINIVRNRDDIDKLKSYLKSLGADY-V--FTEEELRNISRDASIPKP 284 (405)
Q Consensus 209 ~~~~~g~~VLI~ga~G~vG~~aiqla~~~G-~~v~~~~~~~~~~~~~~~~~~~lg~~~-v--~~~~d~~~i~~~t~g~g~ 284 (405)
.+.++|++||=.|+ |.|..++++++.++ .+++++-.+.+..+...+.++.+|.+. + .+. |............+
T Consensus 234 L~~~~g~~VLDlca--g~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~-d~~~~~~~~~~~~f 310 (426)
T TIGR00563 234 LAPQNEETILDACA--APGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDG-DGRGPSQWAENEQF 310 (426)
T ss_pred hCCCCCCeEEEeCC--CccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecc-cccccccccccccc
Confidence 46789999998887 44666777777775 566666544443344445566677652 2 221 11111111123469
Q ss_pred cEEEE---CCCch--------------------------hHHHHHHhcccCCEEEEEe
Q psy2960 285 KLALN---CVGGN--------------------------SATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 285 Dvvld---~~g~~--------------------------~~~~~~~~l~~~G~~v~~g 313 (405)
|.||- |+|.. .+..++++|+|||+++..-
T Consensus 311 D~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvyst 368 (426)
T TIGR00563 311 DRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYAT 368 (426)
T ss_pred CEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 99873 55421 2345678899999998754
No 458
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=93.89 E-value=0.26 Score=46.56 Aligned_cols=37 Identities=22% Similarity=0.327 Sum_probs=32.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 249 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~ 249 (405)
.|.+|||.||+|.+|...+..+...|.+|++++++.+
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~ 39 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPN 39 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCC
Confidence 3678999999999999999999999999998887654
No 459
>PRK01581 speE spermidine synthase; Validated
Probab=93.89 E-value=0.83 Score=43.80 Aligned_cols=94 Identities=11% Similarity=0.094 Sum_probs=55.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcC-----------CcEE-eChhhHHH-Hhhhc
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLG-----------ADYV-FTEEELRN-ISRDA 279 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg-----------~~~v-~~~~d~~~-i~~~t 279 (405)
..++|||.|+ |.|.++..++++-+...+.++ |..++..+.+++.. ..++ +-..|..+ +.+.
T Consensus 150 ~PkrVLIIGg--GdG~tlrelLk~~~v~~It~V---EIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~~- 223 (374)
T PRK01581 150 DPKRVLILGG--GDGLALREVLKYETVLHVDLV---DLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSSP- 223 (374)
T ss_pred CCCEEEEECC--CHHHHHHHHHhcCCCCeEEEE---eCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHhc-
Confidence 3469999997 456777788887666667777 43445566666421 1111 11123223 4332
Q ss_pred CCCCCcEEEECCCc------------hhHHHHHHhcccCCEEEEEe
Q psy2960 280 SIPKPKLALNCVGG------------NSATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 280 ~g~g~Dvvld~~g~------------~~~~~~~~~l~~~G~~v~~g 313 (405)
...+|+||--... +.+..+.+.|+|+|.++.-.
T Consensus 224 -~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs 268 (374)
T PRK01581 224 -SSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS 268 (374)
T ss_pred -CCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 4579998754321 13345578999999987764
No 460
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.88 E-value=0.56 Score=43.79 Aligned_cols=95 Identities=14% Similarity=0.149 Sum_probs=67.6
Q ss_pred ccCCCcHHHHHHHHHhhcCC-CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEe-cCCcchHHHHHHHHHcCCcEEeCh
Q psy2960 192 SGITSNPCTAYRMLKDYNSL-SPGDVVIQNGANSACGQNVIQIARHWGLKTINIV-RNRDDIDKLKSYLKSLGADYVFTE 269 (405)
Q Consensus 192 a~~~~~~~ta~~al~~~~~~-~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~-~~~~~~~~~~~~~~~lg~~~v~~~ 269 (405)
..+||+....+..|... ++ -.|++|+|.|-++.+|.-.+.++...|+.|++.- ++.+
T Consensus 136 ~~~PcTp~ai~~ll~~~-~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-------------------- 194 (296)
T PRK14188 136 ALVPCTPLGCMMLLRRV-HGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-------------------- 194 (296)
T ss_pred CCcCCCHHHHHHHHHHh-CCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC--------------------
Confidence 45677777666666553 43 4799999999889999999999999999888772 2211
Q ss_pred hhHHHHhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEEecc
Q psy2960 270 EELRNISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGM 315 (405)
Q Consensus 270 ~d~~~i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~~ 315 (405)
..++. +..|+|+-++|.+..... ..+++|..++.+|..
T Consensus 195 --l~e~~-----~~ADIVIsavg~~~~v~~-~~lk~GavVIDvGin 232 (296)
T PRK14188 195 --LPAVC-----RRADILVAAVGRPEMVKG-DWIKPGATVIDVGIN 232 (296)
T ss_pred --HHHHH-----hcCCEEEEecCChhhcch-heecCCCEEEEcCCc
Confidence 11111 246999999998765332 238899999998843
No 461
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.87 E-value=0.65 Score=43.01 Aligned_cols=95 Identities=11% Similarity=0.136 Sum_probs=68.3
Q ss_pred ccCCCcHHHHHHHHHhhcCCC-CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChh
Q psy2960 192 SGITSNPCTAYRMLKDYNSLS-PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE 270 (405)
Q Consensus 192 a~~~~~~~ta~~al~~~~~~~-~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~ 270 (405)
..+||+....+..+.. -++. .|.+|+|.|.+.-+|.-...++...||+|.+.- +.. +
T Consensus 142 ~~~PcTp~av~~ll~~-~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~h-s~T--------------------~ 199 (287)
T PRK14176 142 GLVPCTPHGVIRALEE-YGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCH-VFT--------------------D 199 (287)
T ss_pred CCCCCcHHHHHHHHHH-cCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEe-ccC--------------------C
Confidence 4567777766666655 4553 799999999988899999999999999886553 111 1
Q ss_pred hHHHHhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEEec
Q psy2960 271 ELRNISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGG 314 (405)
Q Consensus 271 d~~~i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~ 314 (405)
+..+ .+ +..|+|+.++|.+.+. --+.++++-.++.+|.
T Consensus 200 ~l~~---~~--~~ADIvv~AvG~p~~i-~~~~vk~gavVIDvGi 237 (287)
T PRK14176 200 DLKK---YT--LDADILVVATGVKHLI-KADMVKEGAVIFDVGI 237 (287)
T ss_pred CHHH---HH--hhCCEEEEccCCcccc-CHHHcCCCcEEEEecc
Confidence 1122 11 2469999999987654 3458899999999984
No 462
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=93.84 E-value=0.23 Score=51.96 Aligned_cols=79 Identities=16% Similarity=0.180 Sum_probs=55.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc-----------------chHHHHHHHHHcCCcEEeChhh-HHH
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD-----------------DIDKLKSYLKSLGADYVFTEEE-LRN 274 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~-----------------~~~~~~~~~~~lg~~~v~~~~d-~~~ 274 (405)
.|++|+|.|+ |+.|+.++..++..|.+|++.-+.+. ..+.+.+.++++|.+..++..- ...
T Consensus 309 ~~kkVaIIG~-GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGA-GPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 4899999999 99999999999999999877754321 0123467778899887766431 111
Q ss_pred -HhhhcCCCCCcEEEECCCch
Q psy2960 275 -ISRDASIPKPKLALNCVGGN 294 (405)
Q Consensus 275 -i~~~t~g~g~Dvvld~~g~~ 294 (405)
+.++. .++|.||.++|..
T Consensus 388 ~~~~l~--~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFSDLT--SEYDAVFIGVGTY 406 (639)
T ss_pred CHHHHH--hcCCEEEEeCCCC
Confidence 22222 3689999999863
No 463
>KOG4169|consensus
Probab=93.84 E-value=0.29 Score=43.29 Aligned_cols=101 Identities=15% Similarity=0.223 Sum_probs=64.0
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHc-CCcEE-e------ChhhHHH-Hhhhc-CCCC
Q psy2960 214 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL-GADYV-F------TEEELRN-ISRDA-SIPK 283 (405)
Q Consensus 214 g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~l-g~~~v-~------~~~d~~~-i~~~t-~g~g 283 (405)
|.++++.|++||+|++....+...|+++.++..+.|..+. ...+++. ....+ | +..+.++ ..+.. .-+-
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a-~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEA-IAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHH-HHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 8999999999999999999999999999999877665333 3333332 32223 2 2223222 22221 1345
Q ss_pred CcEEEECCCch------------------hHHHHHHhc-----ccCCEEEEEecc
Q psy2960 284 PKLALNCVGGN------------------SATNLLRTL-----VSKGVMVTYGGM 315 (405)
Q Consensus 284 ~Dvvld~~g~~------------------~~~~~~~~l-----~~~G~~v~~g~~ 315 (405)
+|+.||..|-- ....++..+ .+||.+|.+++.
T Consensus 84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv 138 (261)
T KOG4169|consen 84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSV 138 (261)
T ss_pred eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccc
Confidence 79999988731 112233333 378999998864
No 464
>PRK07574 formate dehydrogenase; Provisional
Probab=93.81 E-value=0.54 Score=45.76 Aligned_cols=35 Identities=26% Similarity=0.258 Sum_probs=31.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 248 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~ 248 (405)
.|.+|.|.|. |.+|+..++.++.+|+++++..++.
T Consensus 191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~ 225 (385)
T PRK07574 191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHR 225 (385)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC
Confidence 5789999999 9999999999999999999886553
No 465
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=93.81 E-value=0.12 Score=46.23 Aligned_cols=74 Identities=12% Similarity=0.165 Sum_probs=47.2
Q ss_pred EEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eChhhHHHHhhhcCCCCCcEEEECCCc
Q psy2960 217 VIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEELRNISRDASIPKPKLALNCVGG 293 (405)
Q Consensus 217 VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d~~~i~~~t~g~g~Dvvld~~g~ 293 (405)
|||.||+|-+|...+..+...|.+|+...++........ .......+ .|..+.+.+.+......+|+|+.+.+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~---~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEE---KKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHH---HHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccc---ccceEEEEEeeccccccccccccccCceEEEEeecc
Confidence 799999999999999999999999998887765422111 11222222 232222222222222378999998875
No 466
>PLN00198 anthocyanidin reductase; Provisional
Probab=93.80 E-value=0.27 Score=46.94 Aligned_cols=77 Identities=14% Similarity=0.164 Sum_probs=48.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHc---CCcEEe--ChhhHHHHhhhcCCCCCcEE
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL---GADYVF--TEEELRNISRDASIPKPKLA 287 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~l---g~~~v~--~~~d~~~i~~~t~g~g~Dvv 287 (405)
.+.+|||.||+|.+|...+..+...|++|++++++.+.... ......+ +.-.++ |-+|...+.+.. .++|+|
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~v 84 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKK-IAHLRALQELGDLKIFGADLTDEESFEAPI--AGCDLV 84 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHH-HHHHHhcCCCCceEEEEcCCCChHHHHHHH--hcCCEE
Confidence 37899999999999999999999999999888766443211 1111122 211222 333333233322 257999
Q ss_pred EECCC
Q psy2960 288 LNCVG 292 (405)
Q Consensus 288 ld~~g 292 (405)
|.+.+
T Consensus 85 ih~A~ 89 (338)
T PLN00198 85 FHVAT 89 (338)
T ss_pred EEeCC
Confidence 99886
No 467
>PLN02650 dihydroflavonol-4-reductase
Probab=93.78 E-value=0.35 Score=46.50 Aligned_cols=38 Identities=18% Similarity=0.216 Sum_probs=33.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcc
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD 250 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~ 250 (405)
...+|||.||+|.+|...+..+...|.+|++++++.+.
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~ 41 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPAN 41 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcch
Confidence 35689999999999999999999999999998876543
No 468
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.76 E-value=0.29 Score=48.83 Aligned_cols=75 Identities=11% Similarity=0.015 Sum_probs=48.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 292 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g 292 (405)
.|.+|+|.|+ |++|.+++.+++..|++|++.-...+......+.+.+.|......... ..+. ..++|+|+.+.|
T Consensus 4 ~~k~v~v~G~-g~~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~----~~~~d~vV~s~g 77 (447)
T PRK02472 4 QNKKVLVLGL-AKSGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHP-LELL----DEDFDLMVKNPG 77 (447)
T ss_pred CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCC-HHHh----cCcCCEEEECCC
Confidence 4788999999 679999999999999998887533322222334456667654332211 1111 124799999886
Q ss_pred c
Q psy2960 293 G 293 (405)
Q Consensus 293 ~ 293 (405)
-
T Consensus 78 i 78 (447)
T PRK02472 78 I 78 (447)
T ss_pred C
Confidence 4
No 469
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=93.75 E-value=1.2 Score=38.54 Aligned_cols=109 Identities=19% Similarity=0.158 Sum_probs=61.6
Q ss_pred cHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHc-CCcEEEEecCCcchHHHHHHHHHcCCcE--EeChhhHH
Q psy2960 197 NPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHW-GLKTINIVRNRDDIDKLKSYLKSLGADY--VFTEEELR 273 (405)
Q Consensus 197 ~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~-G~~v~~~~~~~~~~~~~~~~~~~lg~~~--v~~~~d~~ 273 (405)
..-.....+.....+.++++||=.|+ |.|..++.+++.. +++++++-.+.+..+...+.+...+... ++. .+..
T Consensus 15 ~~~~~r~~~~~~l~~~~~~~vLDiG~--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~-~d~~ 91 (187)
T PRK08287 15 TKEEVRALALSKLELHRAKHLIDVGA--GTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIP-GEAP 91 (187)
T ss_pred chHHHHHHHHHhcCCCCCCEEEEECC--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEe-cCch
Confidence 33333333434467788999998887 4588888888876 3566666544332222233333444332 222 1211
Q ss_pred HHhhhcCCCCCcEEEECCCch----hHHHHHHhcccCCEEEEE
Q psy2960 274 NISRDASIPKPKLALNCVGGN----SATNLLRTLVSKGVMVTY 312 (405)
Q Consensus 274 ~i~~~t~g~g~Dvvld~~g~~----~~~~~~~~l~~~G~~v~~ 312 (405)
. .. ...+|+|+...... .+..+.+.|+++|+++..
T Consensus 92 ~--~~--~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~ 130 (187)
T PRK08287 92 I--EL--PGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT 130 (187)
T ss_pred h--hc--CcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence 1 01 24689998643222 334567899999998764
No 470
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=93.74 E-value=0.14 Score=46.87 Aligned_cols=73 Identities=10% Similarity=0.049 Sum_probs=48.6
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEe-ChhhHHHHhhhcCCCCCcEEEECCCc
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRNISRDASIPKPKLALNCVGG 293 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~-~~~d~~~i~~~t~g~g~Dvvld~~g~ 293 (405)
+|||.||+|- |...+..+...|.+|++++.+... .+.+...|...+. ..-+...+.+.....++|+|+|++..
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~----~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEG----KHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCc----cccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCH
Confidence 6999999765 998888887889999999977654 3344455554443 21111113333335689999999864
No 471
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=93.73 E-value=0.76 Score=44.80 Aligned_cols=74 Identities=22% Similarity=0.347 Sum_probs=53.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHH-HhhhcCCCCCcEEEECC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKLALNCV 291 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~-i~~~t~g~g~Dvvld~~ 291 (405)
.+.+|||.|+ |-+|..++.-+...|...+.++... .+...++++++|+. +...++... + ..+|+||-|+
T Consensus 177 ~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT--~erA~~La~~~~~~-~~~l~el~~~l------~~~DvVissT 246 (414)
T COG0373 177 KDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRT--LERAEELAKKLGAE-AVALEELLEAL------AEADVVISST 246 (414)
T ss_pred ccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCC--HHHHHHHHHHhCCe-eecHHHHHHhh------hhCCEEEEec
Confidence 6899999999 8999999999999998777776332 23445678889854 334444333 3 2469999999
Q ss_pred CchhH
Q psy2960 292 GGNSA 296 (405)
Q Consensus 292 g~~~~ 296 (405)
|.+..
T Consensus 247 sa~~~ 251 (414)
T COG0373 247 SAPHP 251 (414)
T ss_pred CCCcc
Confidence 87643
No 472
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=93.71 E-value=0.36 Score=44.73 Aligned_cols=91 Identities=20% Similarity=0.239 Sum_probs=60.9
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE--e--ChhhHHH-HhhhcCCCCCcEEEE
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV--F--TEEELRN-ISRDASIPKPKLALN 289 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v--~--~~~d~~~-i~~~t~g~g~Dvvld 289 (405)
.+|.|.|+ |-+|.-++.+|..+|++|.+...+. .|+..+..+-..++ . +..++++ +. +.|++|.
T Consensus 169 ~kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n~----~rl~~ldd~f~~rv~~~~st~~~iee~v~------~aDlvIg 237 (371)
T COG0686 169 AKVVVLGG-GVVGTNAAKIAIGLGADVTILDLNI----DRLRQLDDLFGGRVHTLYSTPSNIEEAVK------KADLVIG 237 (371)
T ss_pred ccEEEECC-ccccchHHHHHhccCCeeEEEecCH----HHHhhhhHhhCceeEEEEcCHHHHHHHhh------hccEEEE
Confidence 45778888 8999999999999999999986553 33444444322222 2 1223444 43 4599998
Q ss_pred CC--Cch-----hHHHHHHhcccCCEEEEEeccC
Q psy2960 290 CV--GGN-----SATNLLRTLVSKGVMVTYGGMS 316 (405)
Q Consensus 290 ~~--g~~-----~~~~~~~~l~~~G~~v~~g~~~ 316 (405)
++ ++. ...+.++.|+||+.++.+....
T Consensus 238 aVLIpgakaPkLvt~e~vk~MkpGsVivDVAiDq 271 (371)
T COG0686 238 AVLIPGAKAPKLVTREMVKQMKPGSVIVDVAIDQ 271 (371)
T ss_pred EEEecCCCCceehhHHHHHhcCCCcEEEEEEEcC
Confidence 65 221 2245689999999999997543
No 473
>PRK00811 spermidine synthase; Provisional
Probab=93.71 E-value=0.63 Score=43.37 Aligned_cols=95 Identities=13% Similarity=0.161 Sum_probs=55.3
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHH----cCC-----cEE-eChhhHHH-HhhhcC
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS----LGA-----DYV-FTEEELRN-ISRDAS 280 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~----lg~-----~~v-~~~~d~~~-i~~~t~ 280 (405)
...++||+.|+ |.|..+..++++.+...+..+..+ +...+.+++ +.. .++ +-..|... +.. .
T Consensus 75 ~~p~~VL~iG~--G~G~~~~~~l~~~~~~~V~~VEid---~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~--~ 147 (283)
T PRK00811 75 PNPKRVLIIGG--GDGGTLREVLKHPSVEKITLVEID---ERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAE--T 147 (283)
T ss_pred CCCCEEEEEec--CchHHHHHHHcCCCCCEEEEEeCC---HHHHHHHHHHhHHhccccccCCceEEEECchHHHHhh--C
Confidence 35689999998 447888888888777666666332 333444443 211 111 11223333 333 2
Q ss_pred CCCCcEEEECCC-----------chhHHHHHHhcccCCEEEEEe
Q psy2960 281 IPKPKLALNCVG-----------GNSATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 281 g~g~Dvvld~~g-----------~~~~~~~~~~l~~~G~~v~~g 313 (405)
...+|+|+--+. .+.+..+.+.|+++|.++.-.
T Consensus 148 ~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~ 191 (283)
T PRK00811 148 ENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS 191 (283)
T ss_pred CCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 457999885432 122345568899999998753
No 474
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=93.70 E-value=0.72 Score=41.01 Aligned_cols=101 Identities=16% Similarity=0.158 Sum_probs=65.3
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHcC-CcEEEEecCCc-chHHHHHHHHHcCCcEEe---ChhhHHH-HhhhcCCC
Q psy2960 209 NSLSPGDVVIQNGANSACGQNVIQIARHWG-LKTINIVRNRD-DIDKLKSYLKSLGADYVF---TEEELRN-ISRDASIP 282 (405)
Q Consensus 209 ~~~~~g~~VLI~ga~G~vG~~aiqla~~~G-~~v~~~~~~~~-~~~~~~~~~~~lg~~~v~---~~~d~~~-i~~~t~g~ 282 (405)
+..+...+||=.|. +.|..++.+|..+. -..++++..++ ..+...+.+++.|.+..+ ..-|..+ +.+ ....
T Consensus 55 ~~~~~~k~iLEiGT--~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~-~~~~ 131 (219)
T COG4122 55 ARLSGPKRILEIGT--AIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSR-LLDG 131 (219)
T ss_pred HHhcCCceEEEeec--ccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHh-ccCC
Confidence 55667889999986 78999999999987 34455654333 333345566677876532 1124333 443 2346
Q ss_pred CCcEEE-ECCCc---hhHHHHHHhcccCCEEEEE
Q psy2960 283 KPKLAL-NCVGG---NSATNLLRTLVSKGVMVTY 312 (405)
Q Consensus 283 g~Dvvl-d~~g~---~~~~~~~~~l~~~G~~v~~ 312 (405)
.+|+|| |+--. +.+..++++|++||-++.=
T Consensus 132 ~fDliFIDadK~~yp~~le~~~~lLr~GGliv~D 165 (219)
T COG4122 132 SFDLVFIDADKADYPEYLERALPLLRPGGLIVAD 165 (219)
T ss_pred CccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence 799987 44433 3446678999999998764
No 475
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=93.63 E-value=0.61 Score=42.12 Aligned_cols=104 Identities=12% Similarity=0.135 Sum_probs=60.3
Q ss_pred hhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcC--CcEEEEecCCcchHHHHHHHHHcCCcEEeC--hhhHHH-HhhhcC-
Q psy2960 207 DYNSLSPGDVVIQNGANSACGQNVIQIARHWG--LKTINIVRNRDDIDKLKSYLKSLGADYVFT--EEELRN-ISRDAS- 280 (405)
Q Consensus 207 ~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G--~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~--~~d~~~-i~~~t~- 280 (405)
...+..+.++||=.|. +.|..++.+|+.++ .+++++-.+++..+...+.+...|.+.-+. ..|..+ +.++..
T Consensus 62 ~l~~~~~~~~vLEiGt--~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L~~l~~~ 139 (234)
T PLN02781 62 MLVKIMNAKNTLEIGV--FTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQLLNN 139 (234)
T ss_pred HHHHHhCCCEEEEecC--cccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHHhC
Confidence 3356677889999987 67888888888764 355555333332233344455566532111 123333 333321
Q ss_pred --CCCCcEEEECCCc----hhHHHHHHhcccCCEEEEE
Q psy2960 281 --IPKPKLALNCVGG----NSATNLLRTLVSKGVMVTY 312 (405)
Q Consensus 281 --g~g~Dvvld~~g~----~~~~~~~~~l~~~G~~v~~ 312 (405)
...+|+||--... ..+..+++++++||.++.-
T Consensus 140 ~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~d 177 (234)
T PLN02781 140 DPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFD 177 (234)
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 3579998854432 2334568999999987753
No 476
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=93.63 E-value=0.96 Score=43.77 Aligned_cols=58 Identities=19% Similarity=0.194 Sum_probs=43.7
Q ss_pred hhhccCCCcHHHHHHHHHhhcCC-CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc
Q psy2960 189 TEISGITSNPCTAYRMLKDYNSL-SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 249 (405)
Q Consensus 189 ~~Aa~~~~~~~ta~~al~~~~~~-~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~ 249 (405)
++|-...+.+++- .++.. .+. -.|.+|.|.|- |.||+.+++.+...|++++++..+..
T Consensus 183 ~~aTg~Gv~~~~~-~a~~~-~g~~l~G~rVaVQG~-GNVg~~aa~~l~~~GAkvva~sds~g 241 (411)
T COG0334 183 SEATGYGVFYAIR-EALKA-LGDDLEGARVAVQGF-GNVGQYAAEKLHELGAKVVAVSDSKG 241 (411)
T ss_pred CcccceehHHHHH-HHHHH-cCCCcCCCEEEEECc-cHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 4455555555544 44444 333 38999999999 99999999999999999999987654
No 477
>PRK10901 16S rRNA methyltransferase B; Provisional
Probab=93.62 E-value=0.74 Score=45.66 Aligned_cols=103 Identities=15% Similarity=0.137 Sum_probs=59.2
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHcC-CcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEE
Q psy2960 209 NSLSPGDVVIQNGANSACGQNVIQIARHWG-LKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLA 287 (405)
Q Consensus 209 ~~~~~g~~VLI~ga~G~vG~~aiqla~~~G-~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvv 287 (405)
.++++|++||=.|+ |.|..+..+++..+ .+++++-.+.+..+...+.++.+|....+-..|............+|.|
T Consensus 240 l~~~~g~~VLDlga--G~G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~~~~~~~~~~~~fD~V 317 (427)
T PRK10901 240 LAPQNGERVLDACA--APGGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVIVGDARDPAQWWDGQPFDRI 317 (427)
T ss_pred cCCCCCCEEEEeCC--CCChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcCcccchhhcccCCCCEE
Confidence 46789999988887 34666677777765 5676665444433444455566665422211222111111123468998
Q ss_pred EE---CCCc--------------------------hhHHHHHHhcccCCEEEEEe
Q psy2960 288 LN---CVGG--------------------------NSATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 288 ld---~~g~--------------------------~~~~~~~~~l~~~G~~v~~g 313 (405)
+- |.|. ..+..+.+.|+|||+++...
T Consensus 318 l~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpGG~lvyst 372 (427)
T PRK10901 318 LLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPGGTLLYAT 372 (427)
T ss_pred EECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 72 4431 12345678899999998654
No 478
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=93.61 E-value=0.38 Score=43.59 Aligned_cols=37 Identities=22% Similarity=0.410 Sum_probs=32.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 249 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~ 249 (405)
.+.++||.|+++|+|.+++.-+...|++++++.++.+
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~ 40 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSE 40 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCc
Confidence 5789999999999999999888899999888887654
No 479
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=93.60 E-value=0.49 Score=43.44 Aligned_cols=88 Identities=15% Similarity=0.189 Sum_probs=53.9
Q ss_pred EEEEeCCCcHHHHHHHHHHHHc-CCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCCch
Q psy2960 216 VVIQNGANSACGQNVIQIARHW-GLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVGGN 294 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~-G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g~~ 294 (405)
+|+|.|++|.+|...++.+... +++++++++.+.... ......+. ..+.+++++. ..+|+|+|++..+
T Consensus 3 kV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~---~~~~~~~i---~~~~dl~~ll-----~~~DvVid~t~p~ 71 (257)
T PRK00048 3 KVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPL---VGQGALGV---AITDDLEAVL-----ADADVLIDFTTPE 71 (257)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccc---cccCCCCc---cccCCHHHhc-----cCCCEEEECCCHH
Confidence 6899999999999999888764 788888886543211 11112222 2233443321 1589999999766
Q ss_pred hHHHHHHhcccCCEEEEEec
Q psy2960 295 SATNLLRTLVSKGVMVTYGG 314 (405)
Q Consensus 295 ~~~~~~~~l~~~G~~v~~g~ 314 (405)
.....+..+...|.=+.+|.
T Consensus 72 ~~~~~~~~al~~G~~vvigt 91 (257)
T PRK00048 72 ATLENLEFALEHGKPLVIGT 91 (257)
T ss_pred HHHHHHHHHHHcCCCEEEEC
Confidence 65554444444455455773
No 480
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=93.58 E-value=1 Score=41.24 Aligned_cols=95 Identities=13% Similarity=0.150 Sum_probs=60.4
Q ss_pred hhcCCCCCCEEEEeCCCcHHHHHHHHHHHHc-CCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCc
Q psy2960 207 DYNSLSPGDVVIQNGANSACGQNVIQIARHW-GLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPK 285 (405)
Q Consensus 207 ~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~-G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~D 285 (405)
......++++||=.|+ |.|..+..+++.. +++++++-- .+..++.+++.+.+.+. .|... ......+|
T Consensus 23 ~~l~~~~~~~vLDlGc--G~G~~~~~l~~~~p~~~v~gvD~----s~~~~~~a~~~~~~~~~--~d~~~---~~~~~~fD 91 (255)
T PRK14103 23 ARVGAERARRVVDLGC--GPGNLTRYLARRWPGAVIEALDS----SPEMVAAARERGVDART--GDVRD---WKPKPDTD 91 (255)
T ss_pred HhCCCCCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEEC----CHHHHHHHHhcCCcEEE--cChhh---CCCCCCce
Confidence 3356678999999998 4478888888876 667776643 34446666665544322 12221 11235799
Q ss_pred EEEECCCc-------hhHHHHHHhcccCCEEEEE
Q psy2960 286 LALNCVGG-------NSATNLLRTLVSKGVMVTY 312 (405)
Q Consensus 286 vvld~~g~-------~~~~~~~~~l~~~G~~v~~ 312 (405)
+|+-...- ..+....+.|+|||+++..
T Consensus 92 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 92 VVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred EEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 99975531 2234567889999999865
No 481
>KOG1014|consensus
Probab=93.54 E-value=0.46 Score=44.06 Aligned_cols=82 Identities=13% Similarity=0.215 Sum_probs=55.7
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHH-HHHHHHcCCc---EEeChh--h--HHHHhhhcCCCC
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKL-KSYLKSLGAD---YVFTEE--E--LRNISRDASIPK 283 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~-~~~~~~lg~~---~v~~~~--d--~~~i~~~t~g~g 283 (405)
+-|++.+|.||+.|+|.+-+.=+...|.+++.+.|+.++.+.. .|..++.++. +++|.. + ++.+++.+.+-.
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence 4579999999999999876644444999999999887765443 3444445532 233421 2 344666666777
Q ss_pred CcEEEECCCc
Q psy2960 284 PKLALNCVGG 293 (405)
Q Consensus 284 ~Dvvld~~g~ 293 (405)
+-+.+|++|-
T Consensus 127 VgILVNNvG~ 136 (312)
T KOG1014|consen 127 VGILVNNVGM 136 (312)
T ss_pred eEEEEecccc
Confidence 7889999984
No 482
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.51 E-value=0.74 Score=43.00 Aligned_cols=95 Identities=13% Similarity=0.154 Sum_probs=67.3
Q ss_pred ccCCCcHHHHHHHHHhhcCC-CCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChh
Q psy2960 192 SGITSNPCTAYRMLKDYNSL-SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE 270 (405)
Q Consensus 192 a~~~~~~~ta~~al~~~~~~-~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~ 270 (405)
..+||+....+..|... ++ -.|++|.|.|.++-+|.-.+.++...|++|++.-+...
T Consensus 137 ~~~PcTp~aii~lL~~~-~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~--------------------- 194 (301)
T PRK14194 137 VLTPCTPSGCLRLLEDT-CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST--------------------- 194 (301)
T ss_pred CCCCCcHHHHHHHHHHh-CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC---------------------
Confidence 45677777666666553 44 37999999999889999999999999998887732211
Q ss_pred hHHHHhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEEec
Q psy2960 271 ELRNISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGG 314 (405)
Q Consensus 271 d~~~i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~ 314 (405)
+..+ .+ +..|+|+-++|.+..... ..+++|..++.+|.
T Consensus 195 ~l~e---~~--~~ADIVIsavg~~~~v~~-~~ik~GaiVIDvgi 232 (301)
T PRK14194 195 DAKA---LC--RQADIVVAAVGRPRLIDA-DWLKPGAVVIDVGI 232 (301)
T ss_pred CHHH---HH--hcCCEEEEecCChhcccH-hhccCCcEEEEecc
Confidence 1111 11 246999999998755332 23889999999884
No 483
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=93.47 E-value=0.77 Score=40.93 Aligned_cols=36 Identities=17% Similarity=0.160 Sum_probs=32.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCc
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 249 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~ 249 (405)
.|.+|+|.|- |.||..+++.+...|++++++++++.
T Consensus 22 ~g~~vaIqGf-GnVG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 22 EGLTVAVQGL-GNVGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 6899999999 99999999999999999999987654
No 484
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=93.47 E-value=0.48 Score=42.32 Aligned_cols=97 Identities=9% Similarity=0.050 Sum_probs=56.3
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHH-HHcCCcE---------EeChhhH---HH-H
Q psy2960 210 SLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADY---------VFTEEEL---RN-I 275 (405)
Q Consensus 210 ~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~-~~lg~~~---------v~~~~d~---~~-i 275 (405)
.+.++.+||+.|+ |.|.-++.+|. .|++|+++--+. ..++.+ .+.+... .....+. .. +
T Consensus 34 ~~~~~~rvL~~gC--G~G~da~~LA~-~G~~V~avD~s~----~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~ 106 (218)
T PRK13255 34 ALPAGSRVLVPLC--GKSLDMLWLAE-QGHEVLGVELSE----LAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDF 106 (218)
T ss_pred CCCCCCeEEEeCC--CChHhHHHHHh-CCCeEEEEccCH----HHHHHHHHHcCCCccccccccccccccCceEEEECcc
Confidence 4467889999998 67999999986 799999985443 333332 2333211 1011110 00 1
Q ss_pred hhhc--CCCCCcEEEECCC---------chhHHHHHHhcccCCEEEEEe
Q psy2960 276 SRDA--SIPKPKLALNCVG---------GNSATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 276 ~~~t--~g~g~Dvvld~~g---------~~~~~~~~~~l~~~G~~v~~g 313 (405)
.+.. ....+|.|+|+.. ........++|+|+|+++.+.
T Consensus 107 ~~l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~~ 155 (218)
T PRK13255 107 FALTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLVT 155 (218)
T ss_pred cCCCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 1111 1246899999663 122344568999999865544
No 485
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=93.44 E-value=0.92 Score=34.35 Aligned_cols=85 Identities=16% Similarity=0.196 Sum_probs=54.2
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcC---CcEEEE-ecCCcchHHHHHHHHHcCCcEEe-ChhhHHHHhhhcCCCCCcEEEEC
Q psy2960 216 VVIQNGANSACGQNVIQIARHWG---LKTINI-VRNRDDIDKLKSYLKSLGADYVF-TEEELRNISRDASIPKPKLALNC 290 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G---~~v~~~-~~~~~~~~~~~~~~~~lg~~~v~-~~~d~~~i~~~t~g~g~Dvvld~ 290 (405)
+|.|.|+ |.+|.+.+.-....| .+++.+ .++.+ ...+..++++..... +..+. +. ..|+||-|
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~--~~------~advvila 68 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPE---KAAELAKEYGVQATADDNEEA--AQ------EADVVILA 68 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHH---HHHHHHHHCTTEEESEEHHHH--HH------HTSEEEE-
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHH---HHHHHHHhhccccccCChHHh--hc------cCCEEEEE
Confidence 5788888 999999999999999 788756 43332 234455677765443 22222 32 24999999
Q ss_pred CCchhHHHHHHh---cccCCEEEEE
Q psy2960 291 VGGNSATNLLRT---LVSKGVMVTY 312 (405)
Q Consensus 291 ~g~~~~~~~~~~---l~~~G~~v~~ 312 (405)
+-...+...++. ..++..++.+
T Consensus 69 v~p~~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 69 VKPQQLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp S-GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred ECHHHHHHHHHHHhhccCCCEEEEe
Confidence 998877765433 4556666654
No 486
>PLN03139 formate dehydrogenase; Provisional
Probab=93.42 E-value=0.57 Score=45.56 Aligned_cols=34 Identities=21% Similarity=0.212 Sum_probs=30.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRN 247 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~ 247 (405)
.|.+|.|.|. |.+|...++.++.+|+++++..++
T Consensus 198 ~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~ 231 (386)
T PLN03139 198 EGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRL 231 (386)
T ss_pred CCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCC
Confidence 6889999998 999999999999999999886543
No 487
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=93.42 E-value=0.19 Score=47.53 Aligned_cols=71 Identities=17% Similarity=0.226 Sum_probs=47.4
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEE-eChhhHHHHhhhcCCCCCcEEEECCC
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEELRNISRDASIPKPKLALNCVG 292 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d~~~i~~~t~g~g~Dvvld~~g 292 (405)
+|||.|++|.+|...++.+...|.+|+++.++.+.. ......+...+ .|..+...+.+.. .++|+||++.+
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~D~~~~~~l~~~~--~~~d~vi~~a~ 73 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR----RNLEGLDVEIVEGDLRDPASLRKAV--AGCRALFHVAA 73 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccc----cccccCCceEEEeeCCCHHHHHHHH--hCCCEEEEece
Confidence 699999999999999999999999999998765431 11223344333 2333333333332 35799999875
No 488
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=93.37 E-value=0.65 Score=44.43 Aligned_cols=35 Identities=20% Similarity=0.216 Sum_probs=30.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 248 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~ 248 (405)
.+.+|+|.|+ |++|..++..+-..|...+++++.+
T Consensus 23 ~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D 57 (338)
T PRK12475 23 REKHVLIVGA-GALGAANAEALVRAGIGKLTIADRD 57 (338)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 3578999999 9999999999999999888887654
No 489
>PRK13243 glyoxylate reductase; Reviewed
Probab=93.34 E-value=0.53 Score=45.01 Aligned_cols=35 Identities=26% Similarity=0.382 Sum_probs=31.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 248 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~ 248 (405)
.|++|.|.|. |.+|...++.++.+|++|++..++.
T Consensus 149 ~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~ 183 (333)
T PRK13243 149 YGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTR 183 (333)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCC
Confidence 6899999999 9999999999999999998776543
No 490
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=93.34 E-value=0.13 Score=46.40 Aligned_cols=102 Identities=19% Similarity=0.242 Sum_probs=55.5
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHcC--CcEEEEecCCcchHHHHHHHHHcCCcEE-eChhhHHHHhhhcCCCCCc
Q psy2960 209 NSLSPGDVVIQNGANSACGQNVIQIARHWG--LKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEELRNISRDASIPKPK 285 (405)
Q Consensus 209 ~~~~~g~~VLI~ga~G~vG~~aiqla~~~G--~~v~~~~~~~~~~~~~~~~~~~lg~~~v-~~~~d~~~i~~~t~g~g~D 285 (405)
...++|++||=.|+ |.|..+..+++..+ .+++++--+++..+...+..+..+...| +-..|.+.+. .....+|
T Consensus 43 ~~~~~g~~vLDv~~--GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp--~~d~sfD 118 (233)
T PF01209_consen 43 LGLRPGDRVLDVAC--GTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLP--FPDNSFD 118 (233)
T ss_dssp HT--S--EEEEET---TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB----S-TT-EE
T ss_pred cCCCCCCEEEEeCC--ChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhc--CCCCcee
Confidence 56789999999887 56889999999876 4677775444443333344444444322 1111111110 1135689
Q ss_pred EEEECCCc-------hhHHHHHHhcccCCEEEEEec
Q psy2960 286 LALNCVGG-------NSATNLLRTLVSKGVMVTYGG 314 (405)
Q Consensus 286 vvld~~g~-------~~~~~~~~~l~~~G~~v~~g~ 314 (405)
+|.-+.|- ..+.+..+.|+|||+++.+..
T Consensus 119 ~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~ 154 (233)
T PF01209_consen 119 AVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEF 154 (233)
T ss_dssp EEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeec
Confidence 99987763 233456899999999887763
No 491
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=93.31 E-value=0.82 Score=43.55 Aligned_cols=97 Identities=15% Similarity=0.163 Sum_probs=57.3
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HcCCcEEEEe-cCCcchHHHHHHHH-HcCCcEEeChhhHHH-HhhhcCCCCCcEE
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIAR-HWGLKTINIV-RNRDDIDKLKSYLK-SLGADYVFTEEELRN-ISRDASIPKPKLA 287 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~-~~G~~v~~~~-~~~~~~~~~~~~~~-~lg~~~v~~~~d~~~-i~~~t~g~g~Dvv 287 (405)
+...+++|.|+ |+.|.+.+..+. ..+.+.+.+. ++.++.+...+.+. .+|.+ +...++.++ + .+.|+|
T Consensus 127 ~~~~~v~iiGa-G~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~~~~~av------~~aDiV 198 (326)
T TIGR02992 127 EDSSVVAIFGA-GMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAATDPRAAM------SGADII 198 (326)
T ss_pred CCCcEEEEECC-CHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeCCHHHHh------ccCCEE
Confidence 34578999999 999988877665 5776655544 44333333333332 23443 222233333 3 357999
Q ss_pred EECCCchhHHHHHHhcccCCEEEEEeccC
Q psy2960 288 LNCVGGNSATNLLRTLVSKGVMVTYGGMS 316 (405)
Q Consensus 288 ld~~g~~~~~~~~~~l~~~G~~v~~g~~~ 316 (405)
+.|++.....-.-+.++++-.+..+|...
T Consensus 199 vtaT~s~~p~i~~~~l~~g~~i~~vg~~~ 227 (326)
T TIGR02992 199 VTTTPSETPILHAEWLEPGQHVTAMGSDA 227 (326)
T ss_pred EEecCCCCcEecHHHcCCCcEEEeeCCCC
Confidence 99997643221234578877888788543
No 492
>PRK07340 ornithine cyclodeaminase; Validated
Probab=93.28 E-value=0.84 Score=43.01 Aligned_cols=101 Identities=7% Similarity=0.085 Sum_probs=61.4
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHH-cCCcEEEEecC-CcchHHHHHHHHHcCCcEEeChhhHHH-HhhhcCCCCCcEEE
Q psy2960 212 SPGDVVIQNGANSACGQNVIQIARH-WGLKTINIVRN-RDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKLAL 288 (405)
Q Consensus 212 ~~g~~VLI~ga~G~vG~~aiqla~~-~G~~v~~~~~~-~~~~~~~~~~~~~lg~~~v~~~~d~~~-i~~~t~g~g~Dvvl 288 (405)
....+|+|.|+ |..|.+.+..+.. .+.+.+.+.+. .++.+...+.+.+.+.... ..+.++ + .+.|+|+
T Consensus 123 ~~~~~v~IiGa-G~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~--~~~~~~av------~~aDiVi 193 (304)
T PRK07340 123 APPGDLLLIGT-GVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE--PLDGEAIP------EAVDLVV 193 (304)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE--ECCHHHHh------hcCCEEE
Confidence 35679999999 9999998888764 67765555543 3332333333333333222 223333 3 3679999
Q ss_pred ECCCchh-HHHHHHhcccCCEEEEEeccCCCCcccC
Q psy2960 289 NCVGGNS-ATNLLRTLVSKGVMVTYGGMSREPVQIP 323 (405)
Q Consensus 289 d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 323 (405)
.|+.+.. +...+ ++||-.+..+|.......+++
T Consensus 194 taT~s~~Pl~~~~--~~~g~hi~~iGs~~p~~~El~ 227 (304)
T PRK07340 194 TATTSRTPVYPEA--ARAGRLVVAVGAFTPDMAELA 227 (304)
T ss_pred EccCCCCceeCcc--CCCCCEEEecCCCCCCcccCC
Confidence 9998643 22332 788889999986554444444
No 493
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=93.23 E-value=1 Score=41.89 Aligned_cols=91 Identities=15% Similarity=0.184 Sum_probs=58.6
Q ss_pred EEEEeCCCcHHHHHH-HHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCCch
Q psy2960 216 VVIQNGANSACGQNV-IQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVGGN 294 (405)
Q Consensus 216 ~VLI~ga~G~vG~~a-iqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g~~ 294 (405)
+|.|.|+ |.+|... ..+.+.-++++.++++.+...+ .++.++++|....++ +.+.+.+ ...+|+|++|++..
T Consensus 3 rVAIIG~-G~IG~~h~~~ll~~~~~elvaV~d~d~es~-~la~A~~~Gi~~~~~--~~e~ll~---~~dIDaV~iaTp~~ 75 (285)
T TIGR03215 3 KVAIIGS-GNIGTDLMYKLLRSEHLEMVAMVGIDPESD-GLARARELGVKTSAE--GVDGLLA---NPDIDIVFDATSAK 75 (285)
T ss_pred EEEEEeC-cHHHHHHHHHHHhCCCcEEEEEEeCCcccH-HHHHHHHCCCCEEEC--CHHHHhc---CCCCCEEEECCCcH
Confidence 5889998 9999855 5666666889998886544322 345677888765542 2222211 24799999999987
Q ss_pred hHHHHHHhcccCCEEEEEe
Q psy2960 295 SATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 295 ~~~~~~~~l~~~G~~v~~g 313 (405)
.-......+.+.|+.+..-
T Consensus 76 ~H~e~a~~al~aGk~VIde 94 (285)
T TIGR03215 76 AHARHARLLAELGKIVIDL 94 (285)
T ss_pred HHHHHHHHHHHcCCEEEEC
Confidence 5554444445555555443
No 494
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=93.21 E-value=0.32 Score=45.62 Aligned_cols=78 Identities=12% Similarity=0.040 Sum_probs=42.9
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcC--CcEEEEecCCc-chHHHHHHHHHc-CCcEE-eChhhHHHHhhhcCCCCCcEEEEC
Q psy2960 216 VVIQNGANSACGQNVIQIARHWG--LKTINIVRNRD-DIDKLKSYLKSL-GADYV-FTEEELRNISRDASIPKPKLALNC 290 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G--~~v~~~~~~~~-~~~~~~~~~~~l-g~~~v-~~~~d~~~i~~~t~g~g~Dvvld~ 290 (405)
+|||.||+|.+|...++.+...| .+|++..+... ....+.+.+... +...+ .|-.+...+.+...+..+|+||++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 58999999999999999887776 56766543211 111112211111 11111 133332223333223358999999
Q ss_pred CCc
Q psy2960 291 VGG 293 (405)
Q Consensus 291 ~g~ 293 (405)
.+.
T Consensus 81 a~~ 83 (317)
T TIGR01181 81 AAE 83 (317)
T ss_pred ccc
Confidence 974
No 495
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=93.20 E-value=0.72 Score=38.00 Aligned_cols=32 Identities=16% Similarity=0.214 Sum_probs=27.8
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNR 248 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~ 248 (405)
+|+|.|+ |++|...+..+...|...+.+++.+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 5899999 9999999999999999888887543
No 496
>PRK08317 hypothetical protein; Provisional
Probab=93.20 E-value=0.64 Score=41.61 Aligned_cols=99 Identities=18% Similarity=0.264 Sum_probs=58.6
Q ss_pred hhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcC--CcEEEEecCCcchHHHHHHHHHc----CCcEEeChhhHHHHhhhcC
Q psy2960 207 DYNSLSPGDVVIQNGANSACGQNVIQIARHWG--LKTINIVRNRDDIDKLKSYLKSL----GADYVFTEEELRNISRDAS 280 (405)
Q Consensus 207 ~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G--~~v~~~~~~~~~~~~~~~~~~~l----g~~~v~~~~d~~~i~~~t~ 280 (405)
....++++++||-.|+ | .|..+..+++..+ ++++++--+ +..++.+++. +...-+...|..... . .
T Consensus 13 ~~~~~~~~~~vLdiG~-G-~G~~~~~~a~~~~~~~~v~~~d~~----~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~-~ 84 (241)
T PRK08317 13 ELLAVQPGDRVLDVGC-G-PGNDARELARRVGPEGRVVGIDRS----EAMLALAKERAAGLGPNVEFVRGDADGLP-F-P 84 (241)
T ss_pred HHcCCCCCCEEEEeCC-C-CCHHHHHHHHhcCCCcEEEEEeCC----HHHHHHHHHHhhCCCCceEEEecccccCC-C-C
Confidence 4468889999999999 3 4889999999874 466666433 3334444433 111111111211110 1 1
Q ss_pred CCCCcEEEECCC-----c--hhHHHHHHhcccCCEEEEEe
Q psy2960 281 IPKPKLALNCVG-----G--NSATNLLRTLVSKGVMVTYG 313 (405)
Q Consensus 281 g~g~Dvvld~~g-----~--~~~~~~~~~l~~~G~~v~~g 313 (405)
...+|+|+.... . ..+....++|+++|.++...
T Consensus 85 ~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 85 DGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred CCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 346898885432 2 23345679999999998765
No 497
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.19 E-value=0.92 Score=41.94 Aligned_cols=96 Identities=17% Similarity=0.223 Sum_probs=68.6
Q ss_pred ccCCCcHHHHHHHHHhhcCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhh
Q psy2960 192 SGITSNPCTAYRMLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE 271 (405)
Q Consensus 192 a~~~~~~~ta~~al~~~~~~~~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d 271 (405)
+.+||+....+..|....---.|++|+|.|.+.-||.=...++...||+|...- +..+ |
T Consensus 136 ~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~ch-s~T~--------------------d 194 (282)
T PRK14180 136 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCH-RFTT--------------------D 194 (282)
T ss_pred CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEc-CCCC--------------------C
Confidence 456777776666666543234799999999999999999999999999875552 2111 1
Q ss_pred HHHHhhhcCCCCCcEEEECCCchhHHHHHHhcccCCEEEEEec
Q psy2960 272 LRNISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGG 314 (405)
Q Consensus 272 ~~~i~~~t~g~g~Dvvld~~g~~~~~~~~~~l~~~G~~v~~g~ 314 (405)
..+ .+ +..|+|+-++|.+.+.. -+.+++|-.++.+|.
T Consensus 195 l~~---~~--k~ADIvIsAvGkp~~i~-~~~vk~gavVIDvGi 231 (282)
T PRK14180 195 LKS---HT--TKADILIVAVGKPNFIT-ADMVKEGAVVIDVGI 231 (282)
T ss_pred HHH---Hh--hhcCEEEEccCCcCcCC-HHHcCCCcEEEEecc
Confidence 111 11 24699999999877633 378899999999984
No 498
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=93.19 E-value=0.69 Score=43.62 Aligned_cols=89 Identities=18% Similarity=0.275 Sum_probs=56.0
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHcCC--cEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCC
Q psy2960 215 DVVIQNGANSACGQNVIQIARHWGL--KTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 292 (405)
Q Consensus 215 ~~VLI~ga~G~vG~~aiqla~~~G~--~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g 292 (405)
.+|+|.|+ |.+|.+.+..++..|. ++++..++ +...+.+.+.|...... .+..+. -...|+||.|+.
T Consensus 7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~----~~~~~~a~~~g~~~~~~-~~~~~~-----~~~aDvViiavp 75 (307)
T PRK07502 7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRS----AETRARARELGLGDRVT-TSAAEA-----VKGADLVILCVP 75 (307)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECC----HHHHHHHHhCCCCceec-CCHHHH-----hcCCCEEEECCC
Confidence 67999997 9999999998888885 56655433 23355666777532111 111221 135799999998
Q ss_pred chhHHHH----HHhcccCCEEEEEec
Q psy2960 293 GNSATNL----LRTLVSKGVMVTYGG 314 (405)
Q Consensus 293 ~~~~~~~----~~~l~~~G~~v~~g~ 314 (405)
....... ...++++..++.+|.
T Consensus 76 ~~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 76 VGASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 7554332 245567777776664
No 499
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=93.17 E-value=0.21 Score=46.85 Aligned_cols=62 Identities=11% Similarity=0.182 Sum_probs=40.2
Q ss_pred EEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCC
Q psy2960 216 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 292 (405)
Q Consensus 216 ~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g 292 (405)
+|||.||+|-+|...++.+...| +|+++.+... . ...|-.|.+.+.+...+.++|+||+|.+
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------~----~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa 63 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST----------D----YCGDFSNPEGVAETVRKIRPDVIVNAAA 63 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc----------c----ccCCCCCHHHHHHHHHhcCCCEEEECCc
Confidence 69999999999999999888888 7766643211 0 0113333222333322346899999876
No 500
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=93.14 E-value=0.27 Score=38.19 Aligned_cols=86 Identities=14% Similarity=0.210 Sum_probs=57.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHcCCcEEeChhhHHHHhhhcCCCCCcEEEECCC
Q psy2960 213 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 292 (405)
Q Consensus 213 ~g~~VLI~ga~G~vG~~aiqla~~~G~~v~~~~~~~~~~~~~~~~~~~lg~~~v~~~~d~~~i~~~t~g~g~Dvvld~~g 292 (405)
.|.+|||.|+ |.+|..-++.+...||++++++... +..+ +.-. +..+.+.. . -.++|+|+-+++
T Consensus 6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~-------~~~~--~~i~-~~~~~~~~---~--l~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI-------EFSE--GLIQ-LIRREFEE---D--LDGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE-------HHHH--TSCE-EEESS-GG---G--CTTESEEEE-SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch-------hhhh--hHHH-HHhhhHHH---H--HhhheEEEecCC
Confidence 5889999999 9999999999999999999887432 1111 1111 11222221 1 346899999999
Q ss_pred chhHHHH-HHhcccCCEEEEEec
Q psy2960 293 GNSATNL-LRTLVSKGVMVTYGG 314 (405)
Q Consensus 293 ~~~~~~~-~~~l~~~G~~v~~g~ 314 (405)
.+..... .+..+..|.++....
T Consensus 70 d~~~n~~i~~~a~~~~i~vn~~D 92 (103)
T PF13241_consen 70 DPELNEAIYADARARGILVNVVD 92 (103)
T ss_dssp -HHHHHHHHHHHHHTTSEEEETT
T ss_pred CHHHHHHHHHHHhhCCEEEEECC
Confidence 8888765 466677888888763
Done!