Query psy2961
Match_columns 202
No_of_seqs 144 out of 1849
Neff 10.6
Searched_HMMs 46136
Date Fri Aug 16 21:59:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2961.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2961hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1197|consensus 100.0 1.7E-30 3.7E-35 184.9 15.3 192 2-202 138-332 (336)
2 COG0604 Qor NADPH:quinone redu 100.0 2.1E-29 4.5E-34 193.2 19.0 189 2-200 134-326 (326)
3 PLN03154 putative allyl alcoho 100.0 3.4E-28 7.3E-33 189.1 19.2 187 2-201 150-346 (348)
4 COG1064 AdhP Zn-dependent alco 100.0 4E-28 8.8E-33 182.9 18.5 174 5-201 161-338 (339)
5 COG2130 Putative NADP-dependen 100.0 9.4E-28 2E-32 175.1 16.2 188 2-201 142-339 (340)
6 KOG0025|consensus 100.0 8.4E-27 1.8E-31 168.8 18.5 200 1-201 151-353 (354)
7 TIGR02825 B4_12hDH leukotriene 99.9 5.6E-26 1.2E-30 175.4 18.4 186 2-199 130-325 (325)
8 cd08295 double_bond_reductase_ 99.9 9.9E-26 2.1E-30 174.9 18.6 186 2-200 143-338 (338)
9 KOG1198|consensus 99.9 5.6E-26 1.2E-30 174.6 15.8 186 7-201 154-346 (347)
10 cd08294 leukotriene_B4_DH_like 99.9 2.8E-25 6.1E-30 171.6 18.9 186 2-200 135-329 (329)
11 cd08281 liver_ADH_like1 Zinc-d 99.9 5.7E-25 1.2E-29 172.6 17.8 180 3-198 184-371 (371)
12 cd08291 ETR_like_1 2-enoyl thi 99.9 1.8E-24 4E-29 166.9 18.5 178 10-199 142-324 (324)
13 PRK09880 L-idonate 5-dehydroge 99.9 1.5E-24 3.2E-29 168.6 18.0 173 6-200 165-343 (343)
14 TIGR03451 mycoS_dep_FDH mycoth 99.9 1.9E-24 4E-29 169.0 18.2 181 3-199 169-357 (358)
15 KOG0024|consensus 99.9 3.3E-24 7.1E-29 158.1 18.1 180 4-201 163-353 (354)
16 PLN02827 Alcohol dehydrogenase 99.9 4.2E-24 9.1E-29 167.9 19.4 180 4-201 187-377 (378)
17 cd08293 PTGR2 Prostaglandin re 99.9 8.9E-24 1.9E-28 164.3 19.6 185 3-200 145-345 (345)
18 PLN02586 probable cinnamyl alc 99.9 5.8E-24 1.3E-28 166.2 18.5 175 5-200 178-353 (360)
19 cd08239 THR_DH_like L-threonin 99.9 6.5E-24 1.4E-28 164.8 18.7 175 5-200 158-339 (339)
20 PLN02178 cinnamyl-alcohol dehy 99.9 8.7E-24 1.9E-28 165.8 18.9 172 8-200 176-348 (375)
21 cd08292 ETR_like_2 2-enoyl thi 99.9 2.2E-23 4.7E-28 160.7 20.8 188 5-199 134-324 (324)
22 PRK10309 galactitol-1-phosphat 99.9 8.3E-24 1.8E-28 164.7 17.7 182 5-200 155-346 (347)
23 TIGR03201 dearomat_had 6-hydro 99.9 1.9E-23 4.2E-28 162.7 19.3 176 5-199 161-348 (349)
24 COG1062 AdhC Zn-dependent alco 99.9 7.4E-24 1.6E-28 157.5 16.0 182 2-200 177-366 (366)
25 TIGR02822 adh_fam_2 zinc-bindi 99.9 2.9E-23 6.4E-28 160.4 17.7 168 5-198 160-328 (329)
26 KOG1202|consensus 99.9 6.3E-24 1.4E-28 176.9 14.7 193 1-201 1543-1742(2376)
27 PLN02740 Alcohol dehydrogenase 99.9 5.6E-23 1.2E-27 161.8 18.8 180 3-200 191-381 (381)
28 cd08238 sorbose_phosphate_red 99.9 6.5E-23 1.4E-27 162.8 18.8 180 4-201 169-369 (410)
29 cd08290 ETR 2-enoyl thioester 99.9 1.7E-22 3.8E-27 156.8 20.4 192 4-200 140-341 (341)
30 PLN02514 cinnamyl-alcohol dehy 99.9 9.1E-23 2E-27 159.3 18.9 176 5-201 175-351 (357)
31 cd05282 ETR_like 2-enoyl thioe 99.9 1.6E-22 3.5E-27 155.8 19.8 190 3-199 131-323 (323)
32 KOG0023|consensus 99.9 1.5E-22 3.4E-27 149.0 18.4 173 5-201 176-355 (360)
33 TIGR02818 adh_III_F_hyde S-(hy 99.9 1.6E-22 3.4E-27 158.6 18.5 180 3-200 178-368 (368)
34 cd08300 alcohol_DH_class_III c 99.9 1.9E-22 4.1E-27 158.2 18.6 179 3-199 179-368 (368)
35 cd08301 alcohol_DH_plants Plan 99.9 3.2E-22 6.9E-27 157.0 18.8 179 3-199 180-369 (369)
36 cd08244 MDR_enoyl_red Possible 99.9 6.7E-22 1.4E-26 152.4 20.1 186 4-200 136-324 (324)
37 cd08277 liver_alcohol_DH_like 99.9 3.8E-22 8.2E-27 156.3 18.2 179 3-199 177-365 (365)
38 cd08233 butanediol_DH_like (2R 99.9 2.8E-22 6E-27 156.4 17.4 177 4-199 166-351 (351)
39 cd08246 crotonyl_coA_red croto 99.9 5.7E-22 1.2E-26 156.8 18.3 176 6-198 189-391 (393)
40 COG1063 Tdh Threonine dehydrog 99.9 1.1E-21 2.3E-26 152.4 17.9 177 8-200 166-350 (350)
41 KOG1196|consensus 99.9 4E-22 8.6E-27 145.4 14.3 187 2-201 145-341 (343)
42 TIGR01751 crot-CoA-red crotony 99.9 1.6E-21 3.6E-26 154.4 18.7 180 5-201 184-388 (398)
43 KOG0022|consensus 99.9 2.2E-21 4.9E-26 142.5 17.3 178 4-199 186-374 (375)
44 cd08230 glucose_DH Glucose deh 99.9 9E-22 2E-26 153.7 16.4 175 7-200 169-355 (355)
45 TIGR02819 fdhA_non_GSH formald 99.9 2.2E-21 4.7E-26 153.1 18.2 179 5-201 180-391 (393)
46 PTZ00354 alcohol dehydrogenase 99.9 4.1E-21 8.8E-26 148.6 19.3 192 3-201 133-329 (334)
47 TIGR01202 bchC 2-desacetyl-2-h 99.9 1.9E-21 4.2E-26 149.0 17.1 163 9-199 143-308 (308)
48 cd08274 MDR9 Medium chain dehy 99.9 4.6E-21 1E-25 149.3 18.0 178 4-200 171-350 (350)
49 cd05286 QOR2 Quinone oxidoredu 99.9 1.5E-20 3.3E-25 144.1 20.3 188 3-199 129-319 (320)
50 cd05280 MDR_yhdh_yhfp Yhdh and 99.9 1.8E-20 3.8E-25 144.6 20.4 179 10-200 146-325 (325)
51 TIGR02823 oxido_YhdH putative 99.9 1.8E-20 4E-25 144.4 19.6 182 6-200 140-323 (323)
52 cd08289 MDR_yhfp_like Yhfp put 99.9 2.1E-20 4.6E-25 144.2 19.1 180 9-200 145-326 (326)
53 PRK10754 quinone oxidoreductas 99.9 1.8E-20 3.9E-25 144.8 18.6 188 3-199 133-326 (327)
54 cd08231 MDR_TM0436_like Hypoth 99.9 6.5E-21 1.4E-25 149.2 16.2 178 3-199 170-360 (361)
55 cd08296 CAD_like Cinnamyl alco 99.9 2E-20 4.4E-25 144.9 18.2 171 6-199 159-333 (333)
56 TIGR03366 HpnZ_proposed putati 99.9 7.4E-21 1.6E-25 144.0 14.7 157 6-178 116-280 (280)
57 cd05288 PGDH Prostaglandin deh 99.9 3.1E-20 6.8E-25 143.5 18.2 183 3-198 138-329 (329)
58 cd08243 quinone_oxidoreductase 99.9 5.3E-20 1.2E-24 141.4 18.8 179 3-198 135-319 (320)
59 cd08237 ribitol-5-phosphate_DH 99.9 2.5E-20 5.4E-25 144.8 16.9 168 6-201 159-340 (341)
60 cd08297 CAD3 Cinnamyl alcohol 99.9 7.4E-20 1.6E-24 142.1 19.2 177 6-200 161-341 (341)
61 cd05284 arabinose_DH_like D-ar 99.9 6E-20 1.3E-24 142.6 18.5 174 6-200 163-340 (340)
62 cd08285 NADP_ADH NADP(H)-depen 99.9 5.9E-20 1.3E-24 143.3 17.6 180 4-200 160-351 (351)
63 TIGR02817 adh_fam_1 zinc-bindi 99.9 8.8E-20 1.9E-24 141.4 18.1 186 3-199 136-334 (336)
64 cd08250 Mgc45594_like Mgc45594 99.9 1.7E-19 3.8E-24 139.4 19.2 183 3-199 132-329 (329)
65 PRK13771 putative alcohol dehy 99.8 7.9E-20 1.7E-24 141.6 16.8 173 7-200 159-333 (334)
66 cd08261 Zn_ADH7 Alcohol dehydr 99.8 1.2E-19 2.7E-24 140.7 17.7 178 4-200 153-337 (337)
67 cd08251 polyketide_synthase po 99.8 4.2E-19 9E-24 135.4 20.2 185 5-198 115-303 (303)
68 cd08288 MDR_yhdh Yhdh putative 99.8 3.8E-19 8.2E-24 137.2 19.8 181 7-200 142-324 (324)
69 PRK10083 putative oxidoreducta 99.8 2.1E-19 4.5E-24 139.5 17.9 178 4-202 154-339 (339)
70 cd08276 MDR7 Medium chain dehy 99.8 4.8E-19 1E-23 137.1 19.8 180 3-200 153-336 (336)
71 cd08270 MDR4 Medium chain dehy 99.8 2.9E-19 6.2E-24 136.7 18.3 171 10-200 132-305 (305)
72 cd08278 benzyl_alcohol_DH Benz 99.8 2.2E-19 4.9E-24 140.7 18.1 180 3-199 179-365 (365)
73 cd08283 FDH_like_1 Glutathione 99.8 2.2E-19 4.7E-24 141.7 18.0 178 4-199 178-385 (386)
74 TIGR02824 quinone_pig3 putativ 99.8 6.7E-19 1.4E-23 135.4 20.2 191 3-200 132-325 (325)
75 cd05195 enoyl_red enoyl reduct 99.8 6.8E-19 1.5E-23 133.2 19.9 186 4-198 102-293 (293)
76 cd08269 Zn_ADH9 Alcohol dehydr 99.8 3.6E-19 7.8E-24 136.5 18.4 180 5-198 124-311 (312)
77 cd08263 Zn_ADH10 Alcohol dehyd 99.8 3E-19 6.4E-24 140.2 18.1 180 3-199 180-367 (367)
78 cd05276 p53_inducible_oxidored 99.8 6.9E-19 1.5E-23 135.1 19.6 188 4-198 133-323 (323)
79 cd08265 Zn_ADH3 Alcohol dehydr 99.8 2.5E-19 5.5E-24 141.3 17.2 174 6-198 199-383 (384)
80 cd05285 sorbitol_DH Sorbitol d 99.8 4.9E-19 1.1E-23 137.7 18.4 175 4-198 156-341 (343)
81 cd08260 Zn_ADH6 Alcohol dehydr 99.8 6.6E-19 1.4E-23 137.1 18.6 178 3-199 158-344 (345)
82 cd08259 Zn_ADH5 Alcohol dehydr 99.8 6.4E-19 1.4E-23 136.2 18.3 174 6-199 158-332 (332)
83 PF00107 ADH_zinc_N: Zinc-bind 99.8 5E-20 1.1E-24 123.9 10.6 113 22-138 1-117 (130)
84 cd08241 QOR1 Quinone oxidoredu 99.8 9.4E-19 2E-23 134.4 19.1 188 4-199 133-323 (323)
85 cd08253 zeta_crystallin Zeta-c 99.8 1.2E-18 2.7E-23 133.9 19.7 185 4-200 138-325 (325)
86 cd08240 6_hydroxyhexanoate_dh_ 99.8 6.2E-19 1.3E-23 137.5 18.1 177 4-200 169-350 (350)
87 cd08242 MDR_like Medium chain 99.8 4.8E-19 1E-23 136.4 17.3 167 4-199 149-318 (319)
88 cd05278 FDH_like Formaldehyde 99.8 1.7E-18 3.6E-23 134.8 19.8 178 4-199 161-346 (347)
89 cd08266 Zn_ADH_like1 Alcohol d 99.8 1.7E-18 3.6E-23 134.2 19.7 180 3-199 159-341 (342)
90 cd08256 Zn_ADH2 Alcohol dehydr 99.8 7.3E-19 1.6E-23 137.1 17.7 176 4-198 168-350 (350)
91 cd08262 Zn_ADH8 Alcohol dehydr 99.8 9.9E-19 2.1E-23 135.9 18.2 178 4-199 155-341 (341)
92 cd08254 hydroxyacyl_CoA_DH 6-h 99.8 1.3E-18 2.9E-23 134.8 18.6 177 3-200 158-338 (338)
93 smart00829 PKS_ER Enoylreducta 99.8 2.3E-18 5E-23 130.1 19.4 185 4-198 98-288 (288)
94 cd05283 CAD1 Cinnamyl alcohol 99.8 1.6E-18 3.4E-23 134.6 18.9 172 6-199 165-337 (337)
95 cd08286 FDH_like_ADH2 formalde 99.8 1.2E-18 2.5E-23 135.7 18.1 177 4-200 160-345 (345)
96 cd08272 MDR6 Medium chain dehy 99.8 2.2E-18 4.8E-23 132.7 19.5 185 3-200 137-326 (326)
97 cd08252 AL_MDR Arginate lyase 99.8 1.6E-18 3.4E-23 134.4 18.8 186 4-199 138-336 (336)
98 cd08287 FDH_like_ADH3 formalde 99.8 1.7E-18 3.6E-23 134.8 18.4 176 5-199 163-344 (345)
99 cd08249 enoyl_reductase_like e 99.8 1.9E-18 4.2E-23 134.2 18.6 179 7-200 151-339 (339)
100 cd08279 Zn_ADH_class_III Class 99.8 1.1E-18 2.3E-23 136.8 17.3 180 3-197 175-362 (363)
101 PRK05396 tdh L-threonine 3-deh 99.8 1.1E-18 2.4E-23 135.6 17.2 175 8-201 161-341 (341)
102 cd05279 Zn_ADH1 Liver alcohol 99.8 1.6E-18 3.5E-23 135.9 17.9 178 3-198 176-364 (365)
103 PRK09422 ethanol-active dehydr 99.8 3.1E-18 6.8E-23 132.9 18.5 176 4-201 156-337 (338)
104 cd08235 iditol_2_DH_like L-idi 99.8 2.7E-18 5.9E-23 133.5 18.1 175 6-199 161-343 (343)
105 cd08268 MDR2 Medium chain dehy 99.8 7E-18 1.5E-22 129.9 20.2 188 3-199 137-327 (328)
106 cd08284 FDH_like_2 Glutathione 99.8 2.1E-18 4.6E-23 134.1 17.3 175 6-199 163-343 (344)
107 PLN02702 L-idonate 5-dehydroge 99.8 4E-18 8.7E-23 133.6 18.4 177 4-199 175-363 (364)
108 cd08264 Zn_ADH_like2 Alcohol d 99.8 3E-18 6.5E-23 132.3 17.2 166 6-196 158-324 (325)
109 TIGR00692 tdh L-threonine 3-de 99.8 5.2E-18 1.1E-22 131.8 18.4 175 7-200 158-340 (340)
110 cd08232 idonate-5-DH L-idonate 99.8 9.3E-18 2E-22 130.3 18.4 174 5-200 161-339 (339)
111 cd08299 alcohol_DH_class_I_II_ 99.8 1E-17 2.2E-22 131.7 18.5 180 3-200 183-373 (373)
112 cd08282 PFDH_like Pseudomonas 99.8 7.3E-18 1.6E-22 132.6 17.0 176 4-200 170-375 (375)
113 cd08236 sugar_DH NAD(P)-depend 99.8 8.7E-18 1.9E-22 130.7 17.2 181 5-198 154-343 (343)
114 cd08234 threonine_DH_like L-th 99.8 1.3E-17 2.9E-22 129.1 17.5 175 4-198 153-333 (334)
115 cd08271 MDR5 Medium chain dehy 99.8 3.3E-17 7.2E-22 126.2 19.5 187 3-200 134-325 (325)
116 cd08273 MDR8 Medium chain dehy 99.8 3.8E-17 8.3E-22 126.3 19.0 184 3-198 132-330 (331)
117 cd08255 2-desacetyl-2-hydroxye 99.8 1.2E-17 2.7E-22 126.1 15.6 181 5-198 92-277 (277)
118 cd05281 TDH Threonine dehydrog 99.8 2.5E-17 5.5E-22 128.0 17.2 174 7-199 160-340 (341)
119 cd08275 MDR3 Medium chain dehy 99.8 1.5E-16 3.3E-21 123.1 19.4 188 3-200 131-337 (337)
120 cd08247 AST1_like AST1 is a cy 99.8 3.2E-17 7E-22 127.9 15.5 185 4-200 144-352 (352)
121 cd08248 RTN4I1 Human Reticulon 99.8 2E-17 4.4E-22 128.9 13.7 180 10-199 162-350 (350)
122 cd08245 CAD Cinnamyl alcohol d 99.8 9.9E-17 2.2E-21 124.1 17.1 172 6-198 158-330 (330)
123 cd08298 CAD2 Cinnamyl alcohol 99.7 8.2E-17 1.8E-21 124.5 15.8 168 4-198 161-329 (329)
124 cd05289 MDR_like_2 alcohol deh 99.7 1.1E-16 2.5E-21 122.2 15.2 172 4-198 138-309 (309)
125 cd08267 MDR1 Medium chain dehy 99.7 4.7E-16 1E-20 119.5 16.1 178 4-198 137-319 (319)
126 cd08258 Zn_ADH4 Alcohol dehydr 99.7 1.3E-15 2.9E-20 116.7 15.3 146 3-163 157-306 (306)
127 PF13602 ADH_zinc_N_2: Zinc-bi 99.7 2.2E-17 4.8E-22 110.5 4.3 124 58-198 1-127 (127)
128 PRK09424 pntA NAD(P) transhydr 99.6 9E-14 1.9E-18 111.7 16.6 146 6-167 160-334 (509)
129 cd00401 AdoHcyase S-adenosyl-L 99.6 3.2E-14 6.9E-19 111.6 13.7 164 8-200 199-376 (413)
130 cd05188 MDR Medium chain reduc 99.6 3.9E-14 8.4E-19 106.3 13.4 130 3-138 127-260 (271)
131 TIGR00561 pntA NAD(P) transhyd 99.0 3.5E-08 7.5E-13 79.7 15.7 123 8-135 161-312 (511)
132 TIGR00518 alaDH alanine dehydr 98.7 8.7E-07 1.9E-11 69.7 15.1 150 11-167 167-331 (370)
133 PRK08306 dipicolinate synthase 98.7 1.7E-06 3.7E-11 66.0 14.6 94 10-114 151-245 (296)
134 PRK11873 arsM arsenite S-adeno 98.7 5E-07 1.1E-11 68.3 11.5 173 5-198 72-259 (272)
135 KOG1205|consensus 98.5 2.3E-06 5E-11 64.1 11.8 106 10-115 11-154 (282)
136 PRK05476 S-adenosyl-L-homocyst 98.5 1.4E-06 3E-11 69.2 11.1 91 9-113 210-302 (425)
137 PRK05786 fabG 3-ketoacyl-(acyl 98.5 3.5E-06 7.5E-11 62.2 12.2 104 10-113 4-138 (238)
138 TIGR00936 ahcY adenosylhomocys 98.5 1.5E-06 3.4E-11 68.5 10.5 91 8-112 192-284 (406)
139 PLN02494 adenosylhomocysteinas 98.4 2.8E-06 6.1E-11 67.9 10.2 89 9-112 252-343 (477)
140 COG4221 Short-chain alcohol de 98.4 3E-06 6.5E-11 61.6 8.8 77 10-90 5-91 (246)
141 PRK12742 oxidoreductase; Provi 98.4 1.4E-05 3.1E-10 58.9 12.3 99 10-114 5-135 (237)
142 PRK07109 short chain dehydroge 98.4 1.2E-05 2.5E-10 62.7 11.9 81 10-90 7-95 (334)
143 PRK06139 short chain dehydroge 98.3 5.5E-06 1.2E-10 64.4 9.7 81 10-90 6-94 (330)
144 PRK08339 short chain dehydroge 98.3 1.7E-05 3.6E-10 59.7 11.9 81 10-90 7-95 (263)
145 COG0300 DltE Short-chain dehyd 98.3 9.1E-06 2E-10 60.5 10.0 83 8-90 3-94 (265)
146 PRK05993 short chain dehydroge 98.3 1.9E-05 4.2E-10 59.8 11.5 76 10-89 3-85 (277)
147 COG2518 Pcm Protein-L-isoaspar 98.3 4.8E-06 1E-10 59.4 7.1 104 3-111 65-170 (209)
148 PRK06182 short chain dehydroge 98.2 3.1E-05 6.8E-10 58.4 11.6 77 10-90 2-84 (273)
149 PRK12771 putative glutamate sy 98.2 5E-06 1.1E-10 69.2 7.6 122 7-134 133-275 (564)
150 TIGR02853 spore_dpaA dipicolin 98.2 3.3E-05 7.2E-10 58.7 10.9 94 10-114 150-244 (287)
151 PRK12939 short chain dehydroge 98.2 5.1E-05 1.1E-09 56.3 11.7 81 10-90 6-94 (250)
152 COG3967 DltE Short-chain dehyd 98.2 1.5E-05 3.3E-10 56.4 8.0 74 10-89 4-87 (245)
153 PLN03209 translocon at the inn 98.2 2.8E-05 6.1E-10 63.9 10.7 107 5-113 74-210 (576)
154 PRK06198 short chain dehydroge 98.2 0.00025 5.4E-09 53.0 15.2 81 10-90 5-94 (260)
155 PRK05693 short chain dehydroge 98.1 6.3E-05 1.4E-09 56.8 11.7 75 12-90 2-82 (274)
156 PRK07904 short chain dehydroge 98.1 3.9E-05 8.4E-10 57.4 10.3 83 8-90 5-97 (253)
157 PRK13394 3-hydroxybutyrate deh 98.1 3.1E-05 6.7E-10 57.9 9.8 81 10-90 6-94 (262)
158 KOG1201|consensus 98.1 3.7E-05 8E-10 57.6 9.8 79 9-89 36-123 (300)
159 PF13460 NAD_binding_10: NADH( 98.1 2.7E-05 5.9E-10 55.1 8.9 92 14-113 1-100 (183)
160 PRK08324 short chain dehydroge 98.1 4.6E-05 1E-09 64.9 11.4 77 10-89 421-507 (681)
161 PF02353 CMAS: Mycolic acid cy 98.1 1.5E-05 3.2E-10 60.1 7.3 99 2-110 54-166 (273)
162 PTZ00075 Adenosylhomocysteinas 98.1 3.1E-05 6.6E-10 62.2 9.3 91 8-112 251-343 (476)
163 PF01488 Shikimate_DH: Shikima 98.1 2.6E-05 5.6E-10 52.6 7.6 92 9-110 10-109 (135)
164 PRK07806 short chain dehydroge 98.1 0.00017 3.8E-09 53.5 12.9 102 10-111 5-135 (248)
165 PRK08862 short chain dehydroge 98.1 4.4E-05 9.5E-10 56.1 9.3 80 10-89 4-92 (227)
166 PRK05867 short chain dehydroge 98.1 4.5E-05 9.7E-10 56.9 9.4 81 10-90 8-96 (253)
167 PRK07478 short chain dehydroge 98.1 4.8E-05 1E-09 56.7 9.6 81 10-90 5-93 (254)
168 PRK07533 enoyl-(acyl carrier p 98.1 0.00016 3.5E-09 54.2 12.4 79 10-89 9-97 (258)
169 PRK08265 short chain dehydroge 98.1 0.00011 2.3E-09 55.2 11.4 78 10-90 5-90 (261)
170 PRK05866 short chain dehydroge 98.1 4.8E-05 1E-09 58.1 9.6 81 10-90 39-127 (293)
171 PRK07832 short chain dehydroge 98.1 0.00012 2.5E-09 55.3 11.6 78 13-90 2-88 (272)
172 PRK08415 enoyl-(acyl carrier p 98.0 0.00018 3.8E-09 54.5 12.3 80 10-90 4-93 (274)
173 PRK08217 fabG 3-ketoacyl-(acyl 98.0 6.2E-05 1.3E-09 55.9 9.7 80 10-89 4-91 (253)
174 PRK12828 short chain dehydroge 98.0 6.4E-05 1.4E-09 55.3 9.5 81 10-90 6-92 (239)
175 PRK06128 oxidoreductase; Provi 98.0 0.00018 3.9E-09 55.1 12.2 81 10-90 54-144 (300)
176 PRK05872 short chain dehydroge 98.0 4.7E-05 1E-09 58.3 8.4 78 10-90 8-95 (296)
177 PRK07814 short chain dehydroge 98.0 8.2E-05 1.8E-09 55.8 9.6 81 10-90 9-97 (263)
178 PRK07831 short chain dehydroge 98.0 9.1E-05 2E-09 55.5 9.6 83 8-90 14-107 (262)
179 PRK05876 short chain dehydroge 98.0 8.4E-05 1.8E-09 56.3 9.5 81 10-90 5-93 (275)
180 PRK08594 enoyl-(acyl carrier p 98.0 0.00032 6.9E-09 52.6 12.3 79 10-89 6-96 (257)
181 PRK06949 short chain dehydroge 97.9 0.00011 2.4E-09 54.8 9.7 82 9-90 7-96 (258)
182 PF01135 PCMT: Protein-L-isoas 97.9 3.2E-05 6.9E-10 55.9 6.4 102 4-110 66-172 (209)
183 PF00106 adh_short: short chai 97.9 8.4E-05 1.8E-09 51.6 8.3 79 12-90 1-90 (167)
184 PRK12747 short chain dehydroge 97.9 0.00035 7.6E-09 52.0 12.1 105 10-114 3-148 (252)
185 PRK07523 gluconate 5-dehydroge 97.9 0.00012 2.6E-09 54.6 9.5 81 10-90 9-97 (255)
186 PRK07791 short chain dehydroge 97.9 0.00014 3.1E-09 55.3 10.0 82 9-90 4-102 (286)
187 PRK06172 short chain dehydroge 97.9 0.00013 2.8E-09 54.4 9.6 81 10-90 6-94 (253)
188 PRK06079 enoyl-(acyl carrier p 97.9 0.00027 5.8E-09 52.8 11.2 76 10-89 6-92 (252)
189 PRK07576 short chain dehydroge 97.9 0.00013 2.8E-09 54.9 9.6 80 10-89 8-95 (264)
190 PRK08261 fabG 3-ketoacyl-(acyl 97.9 0.00038 8.2E-09 56.5 12.8 81 9-90 208-294 (450)
191 COG2230 Cfa Cyclopropane fatty 97.9 4.1E-05 9E-10 57.4 6.6 102 3-114 65-180 (283)
192 PRK08589 short chain dehydroge 97.9 0.00015 3.2E-09 54.8 9.8 80 10-90 5-92 (272)
193 PRK09291 short chain dehydroge 97.9 5.8E-05 1.2E-09 56.3 7.5 79 11-90 2-83 (257)
194 PRK07062 short chain dehydroge 97.9 0.00012 2.6E-09 54.9 9.2 81 10-90 7-97 (265)
195 PRK06181 short chain dehydroge 97.9 0.00014 3E-09 54.5 9.5 80 11-90 1-88 (263)
196 PRK07677 short chain dehydroge 97.9 0.00014 3E-09 54.2 9.4 80 11-90 1-88 (252)
197 PRK06194 hypothetical protein; 97.9 0.00015 3.2E-09 55.1 9.8 81 10-90 5-93 (287)
198 PRK06505 enoyl-(acyl carrier p 97.9 0.00013 2.7E-09 55.2 9.3 79 10-89 6-94 (271)
199 PRK07890 short chain dehydroge 97.9 0.00013 2.9E-09 54.4 9.3 82 9-90 3-92 (258)
200 PRK08340 glucose-1-dehydrogena 97.9 0.00013 2.8E-09 54.6 9.3 78 13-90 2-86 (259)
201 PRK06483 dihydromonapterin red 97.9 0.00017 3.7E-09 53.1 9.7 77 11-90 2-84 (236)
202 PRK08303 short chain dehydroge 97.9 0.00018 3.9E-09 55.3 10.0 80 10-89 7-105 (305)
203 PRK08085 gluconate 5-dehydroge 97.9 0.00017 3.8E-09 53.7 9.7 81 10-90 8-96 (254)
204 PRK06484 short chain dehydroge 97.9 0.00026 5.7E-09 58.4 11.7 102 9-114 267-404 (520)
205 PRK05854 short chain dehydroge 97.9 0.00015 3.3E-09 56.0 9.5 80 10-89 13-102 (313)
206 PRK06125 short chain dehydroge 97.9 0.00019 4E-09 53.7 9.8 78 10-90 6-91 (259)
207 cd05213 NAD_bind_Glutamyl_tRNA 97.9 0.00037 8.1E-09 53.7 11.6 75 9-93 176-251 (311)
208 PRK08213 gluconate 5-dehydroge 97.9 0.00017 3.7E-09 53.9 9.6 81 10-90 11-99 (259)
209 PRK07060 short chain dehydroge 97.9 0.00013 2.8E-09 54.0 8.6 77 10-90 8-87 (245)
210 PRK07063 short chain dehydroge 97.9 0.00018 3.9E-09 53.9 9.4 81 10-90 6-96 (260)
211 PRK13943 protein-L-isoaspartat 97.9 0.00014 3.1E-09 56.0 9.0 101 5-110 75-180 (322)
212 PRK07825 short chain dehydroge 97.9 0.00014 3.1E-09 54.8 8.9 77 11-90 5-88 (273)
213 PRK09072 short chain dehydroge 97.9 0.00022 4.7E-09 53.5 9.8 80 10-90 4-90 (263)
214 PRK12938 acetyacetyl-CoA reduc 97.9 0.00047 1E-08 51.1 11.5 81 10-90 2-91 (246)
215 PRK06701 short chain dehydroge 97.8 0.00067 1.5E-08 51.8 12.6 82 9-90 44-134 (290)
216 PRK05653 fabG 3-ketoacyl-(acyl 97.8 0.00022 4.7E-09 52.6 9.7 81 10-90 4-92 (246)
217 PLN02780 ketoreductase/ oxidor 97.8 0.00014 3.1E-09 56.3 8.9 80 10-89 52-141 (320)
218 PRK07097 gluconate 5-dehydroge 97.8 0.00024 5.2E-09 53.3 10.0 81 10-90 9-97 (265)
219 PRK06914 short chain dehydroge 97.8 0.00054 1.2E-08 51.8 11.9 80 11-90 3-91 (280)
220 PRK06935 2-deoxy-D-gluconate 3 97.8 0.00024 5.3E-09 53.1 9.9 80 10-90 14-101 (258)
221 PRK07231 fabG 3-ketoacyl-(acyl 97.8 0.00022 4.7E-09 52.9 9.6 80 10-90 4-91 (251)
222 PRK08643 acetoin reductase; Va 97.8 0.00023 5.1E-09 53.0 9.8 80 11-90 2-89 (256)
223 PRK07035 short chain dehydroge 97.8 0.00021 4.6E-09 53.2 9.5 81 10-90 7-95 (252)
224 PRK06057 short chain dehydroge 97.8 0.0002 4.4E-09 53.4 9.3 78 10-90 6-89 (255)
225 KOG0725|consensus 97.8 0.00021 4.5E-09 54.0 9.2 82 9-90 6-99 (270)
226 PRK06940 short chain dehydroge 97.8 0.00068 1.5E-08 51.3 12.1 78 11-90 2-86 (275)
227 CHL00194 ycf39 Ycf39; Provisio 97.8 0.0003 6.5E-09 54.4 10.3 94 13-112 2-111 (317)
228 KOG4169|consensus 97.8 0.0011 2.4E-08 48.0 12.2 104 11-115 5-141 (261)
229 PRK08277 D-mannonate oxidoredu 97.8 0.00024 5.2E-09 53.7 9.6 80 10-89 9-96 (278)
230 PRK12481 2-deoxy-D-gluconate 3 97.8 0.00022 4.8E-09 53.1 9.3 79 10-90 7-93 (251)
231 PRK07370 enoyl-(acyl carrier p 97.8 0.00069 1.5E-08 50.8 11.9 80 10-89 5-96 (258)
232 PRK07985 oxidoreductase; Provi 97.8 0.00064 1.4E-08 52.0 11.9 81 10-90 48-138 (294)
233 PRK08628 short chain dehydroge 97.8 0.00027 5.9E-09 52.8 9.7 80 10-90 6-93 (258)
234 PRK07454 short chain dehydroge 97.8 0.00029 6.2E-09 52.1 9.7 82 9-90 4-93 (241)
235 PRK08017 oxidoreductase; Provi 97.8 0.00024 5.3E-09 52.9 9.3 75 12-90 3-84 (256)
236 PRK06200 2,3-dihydroxy-2,3-dih 97.8 0.00022 4.8E-09 53.5 9.0 76 10-89 5-89 (263)
237 PRK12937 short chain dehydroge 97.8 0.00099 2.2E-08 49.2 12.3 81 10-90 4-93 (245)
238 PRK06720 hypothetical protein; 97.8 0.00044 9.5E-09 48.5 9.7 80 10-89 15-102 (169)
239 PRK07453 protochlorophyllide o 97.8 8.4E-05 1.8E-09 57.6 6.7 80 10-89 5-92 (322)
240 PRK06124 gluconate 5-dehydroge 97.8 0.00034 7.4E-09 52.2 9.7 81 10-90 10-98 (256)
241 PRK12429 3-hydroxybutyrate deh 97.8 0.00039 8.4E-09 51.8 10.0 81 10-90 3-91 (258)
242 TIGR03325 BphB_TodD cis-2,3-di 97.8 0.00024 5.2E-09 53.3 8.9 76 10-89 4-88 (262)
243 PRK00045 hemA glutamyl-tRNA re 97.8 0.00019 4.1E-09 57.7 8.7 75 9-93 180-255 (423)
244 PRK06500 short chain dehydroge 97.8 0.00027 5.8E-09 52.4 8.9 78 10-90 5-90 (249)
245 PRK06138 short chain dehydroge 97.8 0.00031 6.8E-09 52.1 9.3 80 10-90 4-91 (252)
246 PRK08177 short chain dehydroge 97.7 0.00035 7.5E-09 51.2 9.3 75 12-90 2-81 (225)
247 PRK07774 short chain dehydroge 97.7 0.00036 7.9E-09 51.8 9.5 81 10-90 5-93 (250)
248 PRK10538 malonic semialdehyde 97.7 0.00092 2E-08 49.7 11.7 74 13-90 2-84 (248)
249 PRK07666 fabG 3-ketoacyl-(acyl 97.7 0.00037 8.1E-09 51.4 9.5 81 10-90 6-94 (239)
250 PRK06196 oxidoreductase; Provi 97.7 0.00026 5.7E-09 54.6 9.0 78 10-90 25-109 (315)
251 PRK12826 3-ketoacyl-(acyl-carr 97.7 0.00038 8.2E-09 51.6 9.5 81 10-90 5-93 (251)
252 PRK00377 cbiT cobalt-precorrin 97.7 0.00055 1.2E-08 49.2 10.0 101 5-109 35-144 (198)
253 COG2910 Putative NADH-flavin r 97.7 0.00025 5.5E-09 49.5 7.7 93 13-114 2-108 (211)
254 PRK09242 tropinone reductase; 97.7 0.00038 8.2E-09 52.0 9.5 81 10-90 8-98 (257)
255 PRK08945 putative oxoacyl-(acy 97.7 0.00034 7.4E-09 51.9 9.2 83 8-90 9-102 (247)
256 PRK07326 short chain dehydroge 97.7 0.00034 7.3E-09 51.5 9.0 78 10-90 5-92 (237)
257 PRK06463 fabG 3-ketoacyl-(acyl 97.7 0.00036 7.9E-09 52.1 9.3 78 10-90 6-89 (255)
258 PRK06114 short chain dehydroge 97.7 0.00053 1.1E-08 51.2 10.1 81 10-90 7-96 (254)
259 PRK08063 enoyl-(acyl carrier p 97.7 0.00036 7.8E-09 51.8 9.2 81 10-90 3-92 (250)
260 PRK07792 fabG 3-ketoacyl-(acyl 97.7 0.00048 1E-08 53.0 10.1 81 10-90 11-99 (306)
261 PRK05650 short chain dehydroge 97.7 0.00038 8.3E-09 52.4 9.4 78 13-90 2-87 (270)
262 TIGR01832 kduD 2-deoxy-D-gluco 97.7 0.00044 9.6E-09 51.3 9.5 79 10-90 4-90 (248)
263 PRK13942 protein-L-isoaspartat 97.7 0.00029 6.3E-09 51.3 8.1 103 4-110 70-176 (212)
264 PRK08690 enoyl-(acyl carrier p 97.7 0.00038 8.2E-09 52.3 8.9 80 10-90 5-94 (261)
265 PRK06113 7-alpha-hydroxysteroi 97.7 0.00056 1.2E-08 51.1 9.8 81 10-90 10-98 (255)
266 PRK13656 trans-2-enoyl-CoA red 97.7 0.0037 8E-08 49.3 14.3 82 9-91 39-142 (398)
267 PRK12829 short chain dehydroge 97.7 0.00038 8.1E-09 52.1 8.8 82 6-91 6-97 (264)
268 PRK08278 short chain dehydroge 97.7 0.00067 1.4E-08 51.3 10.2 81 10-90 5-100 (273)
269 PRK06603 enoyl-(acyl carrier p 97.7 0.00049 1.1E-08 51.6 9.3 79 10-89 7-95 (260)
270 PRK06197 short chain dehydroge 97.7 0.00052 1.1E-08 52.7 9.7 80 10-89 15-104 (306)
271 PRK08703 short chain dehydroge 97.7 0.00038 8.3E-09 51.4 8.6 80 10-90 5-97 (239)
272 PRK12743 oxidoreductase; Provi 97.7 0.00052 1.1E-08 51.3 9.3 80 11-90 2-90 (256)
273 PRK06180 short chain dehydroge 97.7 0.00038 8.3E-09 52.7 8.7 77 10-90 3-88 (277)
274 PRK05599 hypothetical protein; 97.7 0.00044 9.6E-09 51.4 8.8 77 13-90 2-87 (246)
275 PRK08267 short chain dehydroge 97.7 0.00043 9.4E-09 51.8 8.9 75 12-90 2-87 (260)
276 PRK07024 short chain dehydroge 97.7 0.00042 9.2E-09 51.8 8.8 77 11-90 2-88 (257)
277 PRK09186 flagellin modificatio 97.7 0.00051 1.1E-08 51.2 9.2 80 10-89 3-92 (256)
278 PF02670 DXP_reductoisom: 1-de 97.7 0.0018 3.9E-08 43.0 10.6 94 14-108 1-119 (129)
279 PRK08159 enoyl-(acyl carrier p 97.7 0.00063 1.4E-08 51.4 9.7 81 8-89 7-97 (272)
280 PF02826 2-Hacid_dh_C: D-isome 97.6 0.00073 1.6E-08 47.8 9.4 87 9-110 34-127 (178)
281 PRK05875 short chain dehydroge 97.6 0.00045 9.7E-09 52.2 8.8 80 10-89 6-95 (276)
282 PRK07775 short chain dehydroge 97.6 0.00071 1.5E-08 51.1 9.7 81 10-90 9-97 (274)
283 PRK12823 benD 1,6-dihydroxycyc 97.6 0.00078 1.7E-08 50.4 9.8 80 10-90 7-94 (260)
284 TIGR03206 benzo_BadH 2-hydroxy 97.6 0.00068 1.5E-08 50.3 9.5 80 10-89 2-89 (250)
285 PRK08993 2-deoxy-D-gluconate 3 97.6 0.00071 1.5E-08 50.5 9.6 79 10-90 9-95 (253)
286 TIGR01035 hemA glutamyl-tRNA r 97.6 0.00039 8.5E-09 55.8 8.5 76 8-93 177-253 (417)
287 PRK06077 fabG 3-ketoacyl-(acyl 97.6 0.00083 1.8E-08 49.9 9.8 104 11-114 6-144 (252)
288 PF12847 Methyltransf_18: Meth 97.6 0.00041 8.8E-09 44.8 7.2 96 10-109 1-110 (112)
289 PLN02657 3,8-divinyl protochlo 97.6 0.001 2.3E-08 53.0 10.7 104 8-113 57-184 (390)
290 PRK06841 short chain dehydroge 97.6 0.00061 1.3E-08 50.7 8.9 77 10-90 14-99 (255)
291 PRK05717 oxidoreductase; Valid 97.6 0.00061 1.3E-08 50.8 8.9 78 10-90 9-94 (255)
292 PRK13944 protein-L-isoaspartat 97.6 0.00061 1.3E-08 49.3 8.5 101 4-110 66-173 (205)
293 TIGR01963 PHB_DH 3-hydroxybuty 97.6 0.00087 1.9E-08 49.8 9.4 80 11-90 1-88 (255)
294 KOG1502|consensus 97.6 0.00061 1.3E-08 52.2 8.4 78 10-90 5-88 (327)
295 KOG1200|consensus 97.6 0.00065 1.4E-08 48.0 7.8 76 11-89 14-99 (256)
296 PRK07102 short chain dehydroge 97.6 0.00099 2.1E-08 49.3 9.5 77 12-90 2-86 (243)
297 PRK07984 enoyl-(acyl carrier p 97.6 0.001 2.3E-08 50.0 9.7 79 10-89 5-93 (262)
298 PRK06484 short chain dehydroge 97.6 0.0006 1.3E-08 56.3 9.1 78 10-90 4-89 (520)
299 TIGR01289 LPOR light-dependent 97.6 0.00092 2E-08 51.7 9.6 77 11-90 3-91 (314)
300 KOG1207|consensus 97.6 0.00021 4.6E-09 49.5 5.2 77 10-89 6-86 (245)
301 PRK08416 7-alpha-hydroxysteroi 97.6 0.00085 1.8E-08 50.3 9.1 80 10-89 7-96 (260)
302 PRK12367 short chain dehydroge 97.6 0.00053 1.1E-08 51.1 7.9 76 10-90 13-89 (245)
303 PF01262 AlaDh_PNT_C: Alanine 97.6 0.0004 8.6E-09 48.6 6.8 98 11-115 20-144 (168)
304 PF05368 NmrA: NmrA-like famil 97.5 0.00089 1.9E-08 49.3 9.0 73 14-90 1-74 (233)
305 PRK12935 acetoacetyl-CoA reduc 97.5 0.0012 2.5E-08 49.0 9.6 81 10-90 5-94 (247)
306 PLN02253 xanthoxin dehydrogena 97.5 0.00078 1.7E-08 51.0 8.8 78 10-90 17-104 (280)
307 PRK12384 sorbitol-6-phosphate 97.5 0.0012 2.6E-08 49.3 9.6 80 11-90 2-91 (259)
308 PRK07074 short chain dehydroge 97.5 0.00089 1.9E-08 50.0 8.8 77 11-90 2-87 (257)
309 TIGR02415 23BDH acetoin reduct 97.5 0.0012 2.5E-08 49.2 9.3 79 12-90 1-87 (254)
310 PRK06953 short chain dehydroge 97.5 0.0011 2.5E-08 48.3 9.1 75 12-90 2-80 (222)
311 cd01078 NAD_bind_H4MPT_DH NADP 97.5 0.0017 3.6E-08 46.6 9.7 81 10-92 27-109 (194)
312 PRK08936 glucose-1-dehydrogena 97.5 0.0013 2.9E-08 49.2 9.6 81 10-90 6-95 (261)
313 PRK05855 short chain dehydroge 97.5 0.00095 2.1E-08 55.7 9.6 81 10-90 314-402 (582)
314 PRK07201 short chain dehydroge 97.5 0.00095 2.1E-08 56.8 9.7 81 10-90 370-458 (657)
315 PRK08226 short chain dehydroge 97.5 0.0014 3E-08 49.1 9.6 80 10-90 5-92 (263)
316 PRK08251 short chain dehydroge 97.5 0.0013 2.9E-08 48.7 9.5 79 11-89 2-90 (248)
317 PLN02730 enoyl-[acyl-carrier-p 97.5 0.0024 5.1E-08 49.1 10.9 35 10-45 8-44 (303)
318 PRK05884 short chain dehydroge 97.5 0.0011 2.3E-08 48.6 8.8 72 13-89 2-78 (223)
319 PRK06997 enoyl-(acyl carrier p 97.5 0.0011 2.4E-08 49.7 8.9 80 10-90 5-94 (260)
320 PF11017 DUF2855: Protein of u 97.5 0.019 4.2E-07 44.0 15.3 94 11-113 136-234 (314)
321 TIGR00080 pimt protein-L-isoas 97.5 0.00091 2E-08 48.8 8.1 102 4-110 71-177 (215)
322 TIGR01470 cysG_Nterm siroheme 97.5 0.0056 1.2E-07 44.3 12.0 92 10-110 8-100 (205)
323 PRK07424 bifunctional sterol d 97.5 0.00069 1.5E-08 54.1 7.9 76 10-90 177-255 (406)
324 KOG1610|consensus 97.5 0.0044 9.6E-08 47.0 11.6 107 9-115 27-169 (322)
325 PRK12746 short chain dehydroge 97.5 0.0014 3E-08 48.8 9.1 36 10-45 5-41 (254)
326 PRK05557 fabG 3-ketoacyl-(acyl 97.4 0.0021 4.6E-08 47.4 10.0 81 10-90 4-93 (248)
327 TIGR00507 aroE shikimate 5-deh 97.4 0.0023 5E-08 48.4 10.2 95 9-111 115-215 (270)
328 PF13561 adh_short_C2: Enoyl-( 97.4 0.0033 7.1E-08 46.5 10.8 162 18-186 1-222 (241)
329 PRK12744 short chain dehydroge 97.4 0.0021 4.6E-08 48.0 9.9 81 10-90 7-99 (257)
330 PRK07067 sorbitol dehydrogenas 97.4 0.0014 3.1E-08 48.9 9.0 78 10-90 5-90 (257)
331 TIGR01829 AcAcCoA_reduct aceto 97.4 0.0018 3.8E-08 47.8 9.3 79 12-90 1-88 (242)
332 PRK06179 short chain dehydroge 97.4 0.001 2.2E-08 50.1 8.1 74 11-90 4-83 (270)
333 PRK08261 fabG 3-ketoacyl-(acyl 97.4 0.00023 5E-09 57.8 4.9 43 4-46 27-73 (450)
334 PRK11705 cyclopropane fatty ac 97.4 0.0011 2.4E-08 52.6 8.5 96 4-110 161-267 (383)
335 TIGR02622 CDP_4_6_dhtase CDP-g 97.4 0.0016 3.4E-08 51.1 9.3 80 10-90 3-85 (349)
336 PRK06398 aldose dehydrogenase; 97.4 0.00038 8.2E-09 52.1 5.6 76 10-90 5-82 (258)
337 PRK03369 murD UDP-N-acetylmura 97.4 0.0011 2.4E-08 54.4 8.6 74 7-92 8-82 (488)
338 PRK06123 short chain dehydroge 97.4 0.002 4.4E-08 47.7 9.3 80 11-90 2-90 (248)
339 PRK07577 short chain dehydroge 97.4 0.00053 1.1E-08 50.4 6.1 72 10-90 2-78 (234)
340 PRK08264 short chain dehydroge 97.4 0.0016 3.4E-08 48.0 8.6 72 10-90 5-83 (238)
341 PRK09134 short chain dehydroge 97.4 0.0025 5.5E-08 47.6 9.8 81 10-90 8-97 (258)
342 KOG1208|consensus 97.4 0.0015 3.3E-08 50.3 8.5 81 9-89 33-123 (314)
343 PRK06718 precorrin-2 dehydroge 97.4 0.0062 1.3E-07 44.0 11.2 93 10-111 9-101 (202)
344 PRK06947 glucose-1-dehydrogena 97.4 0.0022 4.8E-08 47.5 9.2 78 12-89 3-89 (248)
345 PRK09135 pteridine reductase; 97.4 0.0016 3.5E-08 48.2 8.4 37 10-46 5-41 (249)
346 PRK12745 3-ketoacyl-(acyl-carr 97.4 0.0027 5.9E-08 47.2 9.6 79 12-90 3-90 (256)
347 PRK05565 fabG 3-ketoacyl-(acyl 97.3 0.00068 1.5E-08 50.1 6.3 80 11-90 5-93 (247)
348 PRK13940 glutamyl-tRNA reducta 97.3 0.0024 5.3E-08 51.1 9.7 78 9-94 179-256 (414)
349 PRK09730 putative NAD(P)-bindi 97.3 0.003 6.4E-08 46.7 9.6 79 12-90 2-89 (247)
350 KOG1014|consensus 97.3 0.0023 5E-08 48.5 8.7 82 9-90 47-136 (312)
351 PRK07889 enoyl-(acyl carrier p 97.3 0.0022 4.8E-08 48.0 8.9 79 10-90 6-95 (256)
352 PRK05447 1-deoxy-D-xylulose 5- 97.3 0.0062 1.3E-07 48.0 11.3 96 12-108 2-120 (385)
353 KOG1199|consensus 97.3 0.0021 4.6E-08 44.5 7.6 80 9-91 7-94 (260)
354 PRK12827 short chain dehydroge 97.3 0.0028 6E-08 46.9 9.2 81 10-90 5-97 (249)
355 PRK08263 short chain dehydroge 97.3 0.0025 5.4E-08 48.2 9.0 76 11-90 3-87 (275)
356 PRK07856 short chain dehydroge 97.3 0.0022 4.8E-08 47.7 8.6 75 10-90 5-85 (252)
357 PRK06482 short chain dehydroge 97.3 0.0026 5.6E-08 48.0 9.0 75 12-90 3-86 (276)
358 COG0686 Ald Alanine dehydrogen 97.3 0.0015 3.3E-08 49.4 7.3 101 7-115 165-273 (371)
359 COG1748 LYS9 Saccharopine dehy 97.3 0.0026 5.5E-08 50.2 8.9 93 12-111 2-100 (389)
360 PRK12936 3-ketoacyl-(acyl-carr 97.3 0.0031 6.7E-08 46.5 9.1 78 10-90 5-90 (245)
361 COG2242 CobL Precorrin-6B meth 97.3 0.0052 1.1E-07 43.3 9.4 100 6-110 30-135 (187)
362 PRK06719 precorrin-2 dehydroge 97.3 0.011 2.4E-07 40.9 11.1 89 10-110 12-100 (157)
363 KOG1209|consensus 97.3 0.0037 8E-08 44.9 8.7 100 10-114 6-142 (289)
364 PRK12825 fabG 3-ketoacyl-(acyl 97.2 0.004 8.7E-08 45.9 9.5 80 10-89 5-93 (249)
365 COG3288 PntA NAD/NADP transhyd 97.2 0.011 2.4E-07 44.8 11.5 150 6-163 159-336 (356)
366 PRK08642 fabG 3-ketoacyl-(acyl 97.2 0.0039 8.5E-08 46.3 9.4 76 11-89 5-90 (253)
367 COG2519 GCD14 tRNA(1-methylade 97.2 0.0039 8.4E-08 46.0 8.8 103 3-110 87-195 (256)
368 PF00670 AdoHcyase_NAD: S-aden 97.2 0.0091 2E-07 41.2 10.1 89 8-112 20-112 (162)
369 PRK06523 short chain dehydroge 97.2 0.00075 1.6E-08 50.5 5.3 37 10-46 8-44 (260)
370 PRK06101 short chain dehydroge 97.2 0.0037 8.1E-08 46.2 8.8 35 12-46 2-36 (240)
371 cd01080 NAD_bind_m-THF_DH_Cycl 97.2 0.0039 8.5E-08 43.6 8.3 77 9-112 42-118 (168)
372 PRK12748 3-ketoacyl-(acyl-carr 97.2 0.0057 1.2E-07 45.6 9.6 35 10-44 4-40 (256)
373 PRK12548 shikimate 5-dehydroge 97.1 0.0038 8.3E-08 47.7 8.6 35 10-45 125-160 (289)
374 KOG1210|consensus 97.1 0.0039 8.4E-08 47.3 8.2 81 7-90 29-122 (331)
375 TIGR02469 CbiT precorrin-6Y C5 97.1 0.0072 1.6E-07 39.6 8.8 102 5-110 14-122 (124)
376 PRK14175 bifunctional 5,10-met 97.1 0.0045 9.9E-08 46.9 8.6 77 9-112 156-232 (286)
377 TIGR02685 pter_reduc_Leis pter 97.1 0.0038 8.3E-08 46.9 8.4 34 12-45 2-35 (267)
378 PRK05562 precorrin-2 dehydroge 97.1 0.053 1.2E-06 39.7 13.7 113 10-132 24-138 (223)
379 PRK12859 3-ketoacyl-(acyl-carr 97.1 0.0056 1.2E-07 45.7 9.1 82 9-90 4-106 (256)
380 PRK14192 bifunctional 5,10-met 97.1 0.0053 1.1E-07 46.6 8.5 78 8-112 156-233 (283)
381 PLN02240 UDP-glucose 4-epimera 97.1 0.0062 1.4E-07 47.6 9.3 80 11-90 5-91 (352)
382 PLN02989 cinnamyl-alcohol dehy 97.1 0.0048 1E-07 47.8 8.5 37 10-46 4-40 (325)
383 PRK06171 sorbitol-6-phosphate 97.1 0.0034 7.5E-08 47.1 7.5 74 10-90 8-87 (266)
384 TIGR02632 RhaD_aldol-ADH rhamn 97.0 0.006 1.3E-07 52.2 9.5 81 10-90 413-503 (676)
385 PRK07069 short chain dehydroge 97.0 0.0066 1.4E-07 45.0 8.8 78 13-90 1-89 (251)
386 TIGR01831 fabG_rel 3-oxoacyl-( 97.0 0.0063 1.4E-07 44.8 8.6 76 14-89 1-85 (239)
387 PRK00312 pcm protein-L-isoaspa 97.0 0.0053 1.2E-07 44.6 8.0 101 4-110 72-175 (212)
388 PLN00016 RNA-binding protein; 97.0 0.0086 1.9E-07 47.5 9.7 98 11-111 52-165 (378)
389 PRK11207 tellurite resistance 97.0 0.0065 1.4E-07 43.7 8.2 100 5-110 25-134 (197)
390 PLN02896 cinnamyl-alcohol dehy 97.0 0.0078 1.7E-07 47.2 9.2 40 7-46 6-45 (353)
391 PRK04148 hypothetical protein; 97.0 0.0061 1.3E-07 40.7 7.1 83 9-102 15-100 (134)
392 PLN00141 Tic62-NAD(P)-related 96.9 0.0032 7E-08 46.9 6.5 98 10-112 16-133 (251)
393 PLN02986 cinnamyl-alcohol dehy 96.9 0.0056 1.2E-07 47.4 8.0 37 10-46 4-40 (322)
394 COG4122 Predicted O-methyltran 96.9 0.0086 1.9E-07 43.6 8.3 103 4-109 53-165 (219)
395 PLN00015 protochlorophyllide r 96.9 0.0061 1.3E-07 47.0 8.2 73 15-90 1-85 (308)
396 COG0623 FabI Enoyl-[acyl-carri 96.9 0.089 1.9E-06 38.4 13.6 107 8-117 3-151 (259)
397 TIGR01830 3oxo_ACP_reduc 3-oxo 96.9 0.0034 7.3E-08 46.1 6.5 77 14-90 1-86 (239)
398 PF08659 KR: KR domain; Inter 96.9 0.016 3.4E-07 41.0 9.6 78 13-90 2-91 (181)
399 PRK10675 UDP-galactose-4-epime 96.9 0.0077 1.7E-07 46.8 8.7 78 13-90 2-83 (338)
400 TIGR00438 rrmJ cell division p 96.9 0.019 4.1E-07 40.9 10.0 96 5-110 27-146 (188)
401 PRK08618 ornithine cyclodeamin 96.9 0.013 2.9E-07 45.5 9.8 101 10-121 126-232 (325)
402 COG2226 UbiE Methylase involve 96.9 0.011 2.4E-07 43.6 8.8 105 5-113 46-159 (238)
403 PRK06300 enoyl-(acyl carrier p 96.9 0.0075 1.6E-07 46.3 8.3 33 10-42 7-41 (299)
404 PRK08309 short chain dehydroge 96.9 0.061 1.3E-06 38.0 12.3 87 13-104 2-99 (177)
405 TIGR03589 PseB UDP-N-acetylglu 96.9 0.0066 1.4E-07 47.1 8.1 75 10-90 3-84 (324)
406 PRK07041 short chain dehydroge 96.9 0.0079 1.7E-07 44.0 8.1 72 15-90 1-79 (230)
407 PRK00258 aroE shikimate 5-dehy 96.9 0.011 2.5E-07 44.8 9.0 92 9-110 121-221 (278)
408 PRK07023 short chain dehydroge 96.9 0.0033 7.2E-08 46.5 6.0 34 13-46 3-36 (243)
409 TIGR01500 sepiapter_red sepiap 96.9 0.014 3.1E-07 43.6 9.4 35 13-47 2-40 (256)
410 TIGR02356 adenyl_thiF thiazole 96.9 0.017 3.6E-07 41.8 9.4 35 10-45 20-54 (202)
411 TIGR00715 precor6x_red precorr 96.9 0.0029 6.2E-08 47.3 5.5 72 13-89 2-74 (256)
412 PLN02214 cinnamoyl-CoA reducta 96.9 0.0077 1.7E-07 47.1 8.2 38 9-46 8-45 (342)
413 PRK08219 short chain dehydroge 96.8 0.012 2.6E-07 42.8 8.8 75 11-90 3-81 (227)
414 PRK12824 acetoacetyl-CoA reduc 96.8 0.014 3E-07 43.1 9.1 77 12-90 3-90 (245)
415 PRK14967 putative methyltransf 96.8 0.022 4.8E-07 41.7 10.0 99 6-110 32-159 (223)
416 PRK08220 2,3-dihydroxybenzoate 96.8 0.011 2.4E-07 43.8 8.6 72 10-90 7-86 (252)
417 COG0169 AroE Shikimate 5-dehyd 96.8 0.0063 1.4E-07 46.1 7.2 94 9-110 124-226 (283)
418 PRK15469 ghrA bifunctional gly 96.8 0.013 2.7E-07 45.4 8.9 35 10-45 135-169 (312)
419 PF01370 Epimerase: NAD depend 96.8 0.0034 7.5E-08 46.0 5.5 70 14-91 1-76 (236)
420 TIGR01179 galE UDP-glucose-4-e 96.8 0.0078 1.7E-07 46.3 7.5 78 13-90 1-80 (328)
421 TIGR01472 gmd GDP-mannose 4,6- 96.8 0.0094 2E-07 46.6 8.0 35 12-46 1-35 (343)
422 TIGR01809 Shik-DH-AROM shikima 96.7 0.012 2.6E-07 44.8 8.3 76 10-91 124-201 (282)
423 PLN02662 cinnamyl-alcohol dehy 96.7 0.012 2.7E-07 45.3 8.6 37 10-46 3-39 (322)
424 TIGR03466 HpnA hopanoid-associ 96.7 0.0046 9.9E-08 47.8 6.1 71 13-89 2-73 (328)
425 PRK07574 formate dehydrogenase 96.7 0.024 5.1E-07 45.1 10.1 35 10-45 191-225 (385)
426 PRK00107 gidB 16S rRNA methylt 96.7 0.018 3.9E-07 41.0 8.6 98 8-110 43-145 (187)
427 TIGR03649 ergot_EASG ergot alk 96.7 0.016 3.5E-07 44.0 8.9 92 13-111 1-105 (285)
428 PF01596 Methyltransf_3: O-met 96.7 0.0078 1.7E-07 43.5 6.7 101 7-109 42-154 (205)
429 cd05311 NAD_bind_2_malic_enz N 96.7 0.032 7E-07 41.0 10.0 94 9-110 23-128 (226)
430 cd01065 NAD_bind_Shikimate_DH 96.7 0.014 3E-07 40.0 7.7 95 9-112 17-118 (155)
431 PLN02244 tocopherol O-methyltr 96.7 0.0096 2.1E-07 46.6 7.6 100 9-112 117-225 (340)
432 PRK12549 shikimate 5-dehydroge 96.7 0.018 4E-07 43.9 8.9 92 10-110 126-227 (284)
433 PLN02653 GDP-mannose 4,6-dehyd 96.7 0.0036 7.7E-08 48.9 5.2 37 10-46 5-41 (340)
434 PLN02781 Probable caffeoyl-CoA 96.7 0.018 3.8E-07 42.6 8.6 102 5-108 63-176 (234)
435 PF01113 DapB_N: Dihydrodipico 96.7 0.0073 1.6E-07 40.0 5.9 96 13-113 2-100 (124)
436 PLN02928 oxidoreductase family 96.7 0.018 4E-07 45.1 9.0 35 9-44 157-191 (347)
437 PLN02476 O-methyltransferase 96.7 0.027 5.9E-07 42.6 9.5 102 5-108 113-226 (278)
438 PLN03139 formate dehydrogenase 96.7 0.023 4.9E-07 45.2 9.5 35 9-44 197-231 (386)
439 PF08704 GCD14: tRNA methyltra 96.7 0.01 2.2E-07 44.2 7.1 103 5-110 35-146 (247)
440 PLN02686 cinnamoyl-CoA reducta 96.7 0.0092 2E-07 47.2 7.4 38 9-46 51-88 (367)
441 KOG1203|consensus 96.6 0.03 6.5E-07 44.6 9.9 108 9-120 77-210 (411)
442 PF13241 NAD_binding_7: Putati 96.6 0.0084 1.8E-07 38.3 5.8 87 10-112 6-93 (103)
443 PLN02427 UDP-apiose/xylose syn 96.6 0.016 3.5E-07 46.1 8.6 75 9-89 12-95 (386)
444 PLN02696 1-deoxy-D-xylulose-5- 96.6 0.067 1.4E-06 43.1 11.8 96 12-108 58-178 (454)
445 PRK14189 bifunctional 5,10-met 96.6 0.016 3.4E-07 43.9 7.9 77 9-112 156-232 (285)
446 PF03435 Saccharop_dh: Sacchar 96.6 0.013 2.9E-07 46.6 8.0 89 14-109 1-97 (386)
447 PF01118 Semialdhyde_dh: Semia 96.6 0.0064 1.4E-07 40.0 5.2 95 13-113 1-100 (121)
448 COG2227 UbiG 2-polyprenyl-3-me 96.6 0.035 7.6E-07 40.7 9.3 95 10-110 59-161 (243)
449 TIGR01318 gltD_gamma_fam gluta 96.6 0.011 2.4E-07 48.4 7.5 80 10-92 140-238 (467)
450 COG0111 SerA Phosphoglycerate 96.6 0.024 5.3E-07 43.9 9.0 86 10-110 141-233 (324)
451 PRK14106 murD UDP-N-acetylmura 96.6 0.024 5.1E-07 46.1 9.4 74 10-91 4-79 (450)
452 PRK08300 acetaldehyde dehydrog 96.6 0.028 6E-07 43.0 9.0 95 12-110 5-101 (302)
453 COG1028 FabG Dehydrogenases wi 96.6 0.036 7.7E-07 41.1 9.6 37 10-46 4-40 (251)
454 PRK13243 glyoxylate reductase; 96.6 0.036 7.8E-07 43.3 9.9 37 9-46 148-184 (333)
455 PRK07402 precorrin-6B methylas 96.5 0.048 1E-06 39.1 9.9 103 4-110 34-142 (196)
456 PRK08125 bifunctional UDP-gluc 96.5 0.0092 2E-07 51.0 7.1 77 7-89 311-391 (660)
457 PRK14982 acyl-ACP reductase; P 96.5 0.24 5.1E-06 38.8 14.1 160 10-186 154-330 (340)
458 cd00755 YgdL_like Family of ac 96.5 0.14 3.1E-06 37.8 12.4 34 11-45 11-44 (231)
459 PLN02695 GDP-D-mannose-3',5'-e 96.5 0.011 2.3E-07 46.9 6.9 75 9-89 19-94 (370)
460 PF01209 Ubie_methyltran: ubiE 96.5 0.0081 1.8E-07 44.4 5.9 105 5-113 42-156 (233)
461 COG1087 GalE UDP-glucose 4-epi 96.5 0.064 1.4E-06 40.8 10.5 76 12-90 1-77 (329)
462 cd05212 NAD_bind_m-THF_DH_Cycl 96.5 0.03 6.4E-07 37.9 8.1 76 9-111 26-101 (140)
463 PRK07578 short chain dehydroge 96.5 0.055 1.2E-06 38.7 10.1 63 13-90 2-65 (199)
464 PLN02650 dihydroflavonol-4-red 96.5 0.016 3.4E-07 45.5 7.8 37 10-46 4-40 (351)
465 PRK06924 short chain dehydroge 96.5 0.032 6.8E-07 41.4 9.1 34 12-45 2-35 (251)
466 PRK00517 prmA ribosomal protei 96.5 0.049 1.1E-06 40.7 10.0 89 8-111 117-214 (250)
467 TIGR02813 omega_3_PfaA polyket 96.5 0.026 5.7E-07 54.8 10.3 38 7-44 1993-2031(2582)
468 PRK08655 prephenate dehydrogen 96.5 0.035 7.5E-07 45.0 9.8 45 13-60 2-46 (437)
469 PRK10217 dTDP-glucose 4,6-dehy 96.5 0.0085 1.8E-07 47.0 6.2 78 12-90 2-84 (355)
470 COG0031 CysK Cysteine synthase 96.5 0.019 4.1E-07 43.7 7.7 60 4-65 55-114 (300)
471 COG1179 Dinucleotide-utilizing 96.5 0.14 3E-06 37.7 11.7 103 10-114 29-157 (263)
472 TIGR01214 rmlD dTDP-4-dehydror 96.5 0.0087 1.9E-07 45.4 6.0 60 13-90 1-60 (287)
473 PRK06849 hypothetical protein; 96.5 0.031 6.8E-07 44.6 9.4 79 10-91 3-87 (389)
474 PLN00198 anthocyanidin reducta 96.5 0.024 5.1E-07 44.2 8.5 37 10-46 8-44 (338)
475 PRK06550 fabG 3-ketoacyl-(acyl 96.5 0.015 3.2E-07 42.7 7.0 71 10-89 4-76 (235)
476 TIGR00477 tehB tellurite resis 96.4 0.039 8.5E-07 39.6 8.9 99 6-110 26-133 (195)
477 COG0373 HemA Glutamyl-tRNA red 96.4 0.032 6.9E-07 44.5 9.0 75 10-93 177-251 (414)
478 cd01075 NAD_bind_Leu_Phe_Val_D 96.4 0.045 9.7E-07 39.5 9.1 80 9-101 26-107 (200)
479 PRK11150 rfaD ADP-L-glycero-D- 96.4 0.017 3.6E-07 44.4 7.4 33 14-46 2-34 (308)
480 PLN02589 caffeoyl-CoA O-methyl 96.4 0.037 8E-07 41.2 8.7 101 6-108 75-188 (247)
481 TIGR03840 TMPT_Se_Te thiopurin 96.4 0.025 5.3E-07 41.2 7.7 95 9-111 33-153 (213)
482 PRK12475 thiamine/molybdopteri 96.4 0.039 8.5E-07 43.2 9.3 35 10-45 23-57 (338)
483 TIGR00243 Dxr 1-deoxy-D-xylulo 96.4 0.089 1.9E-06 41.5 11.0 95 12-107 2-121 (389)
484 KOG1252|consensus 96.4 0.018 3.9E-07 44.2 7.0 60 5-65 97-156 (362)
485 PRK12809 putative oxidoreducta 96.4 0.021 4.4E-07 48.7 8.2 79 10-91 309-406 (639)
486 PRK10792 bifunctional 5,10-met 96.4 0.033 7.1E-07 42.3 8.4 75 10-111 158-232 (285)
487 PRK07502 cyclohexadienyl dehyd 96.4 0.05 1.1E-06 41.9 9.6 90 12-112 7-102 (307)
488 TIGR01777 yfcH conserved hypot 96.4 0.0047 1E-07 46.9 3.9 67 14-90 1-67 (292)
489 PRK13581 D-3-phosphoglycerate 96.3 0.051 1.1E-06 45.2 10.0 35 10-45 139-173 (526)
490 PRK08644 thiamine biosynthesis 96.3 0.045 9.8E-07 39.8 8.6 35 10-45 27-61 (212)
491 PRK14968 putative methyltransf 96.3 0.038 8.2E-07 39.1 8.1 38 7-47 20-57 (188)
492 PLN02256 arogenate dehydrogena 96.3 0.088 1.9E-06 40.6 10.5 90 9-111 34-128 (304)
493 PRK01438 murD UDP-N-acetylmura 96.3 0.035 7.6E-07 45.6 8.7 74 9-90 14-88 (480)
494 COG1648 CysG Siroheme synthase 96.3 0.18 3.9E-06 36.6 11.4 96 10-114 11-107 (210)
495 TIGR02197 heptose_epim ADP-L-g 96.3 0.013 2.9E-07 45.0 6.0 70 14-89 1-75 (314)
496 PRK14191 bifunctional 5,10-met 96.2 0.041 8.8E-07 41.8 8.2 75 10-111 156-230 (285)
497 TIGR03215 ac_ald_DH_ac acetald 96.2 0.09 2E-06 40.0 10.1 89 13-108 3-93 (285)
498 PF02254 TrkA_N: TrkA-N domain 96.2 0.12 2.5E-06 33.5 9.6 91 14-110 1-96 (116)
499 PRK09620 hypothetical protein; 96.2 0.023 4.9E-07 41.9 6.7 81 10-93 2-100 (229)
500 PRK07340 ornithine cyclodeamin 96.2 0.054 1.2E-06 41.8 9.1 106 10-128 124-234 (304)
No 1
>KOG1197|consensus
Probab=99.97 E-value=1.7e-30 Score=184.87 Aligned_cols=192 Identities=19% Similarity=0.211 Sum_probs=166.7
Q ss_pred cccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeCh--hHHHh-HHHhhCC
Q psy2961 2 LKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTE--EELRN-ISRDASI 78 (202)
Q Consensus 2 l~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~--~~~~~-~~~~~~~ 78 (202)
|++..++++|++||++.+.|++|++++|+++..|+++|+++++.+ +++.+++.|+++.+++ +|+.+ +.+.+++
T Consensus 138 l~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTae----K~~~akenG~~h~I~y~~eD~v~~V~kiTng 213 (336)
T KOG1197|consen 138 LFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAE----KHEIAKENGAEHPIDYSTEDYVDEVKKITNG 213 (336)
T ss_pred HHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHH----HHHHHHhcCCcceeeccchhHHHHHHhccCC
Confidence 456778999999999999999999999999999999999999987 7999999999999974 78888 9999999
Q ss_pred CCCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHH
Q psy2961 79 PKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTE 158 (202)
Q Consensus 79 ~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (202)
.|+|+++|++|.+.+...+.+|++.|.+|.+|...+...+++...+.-+++.+..-.+..| ...+........++..
T Consensus 214 KGVd~vyDsvG~dt~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gY---i~g~~el~~~v~rl~a 290 (336)
T KOG1197|consen 214 KGVDAVYDSVGKDTFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGY---IDGEVELVSYVARLFA 290 (336)
T ss_pred CCceeeeccccchhhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcc---cCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988877667777666666665544332222 2333666778889999
Q ss_pred HHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEeecC
Q psy2961 159 MMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFRQ 202 (202)
Q Consensus 159 ~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~~~ 202 (202)
++-+|.+++.+.++||++++.+|+..++ ++.+.||+++...|
T Consensus 291 lvnsg~lk~~I~~~ypls~vadA~~die--srktvGkvlLlp~~ 332 (336)
T KOG1197|consen 291 LVNSGHLKIHIDHVYPLSKVADAHADIE--SRKTVGKVLLLPGP 332 (336)
T ss_pred HhhcCccceeeeeecchHHHHHHHHHHH--hhhccceEEEeCCc
Confidence 9999999999999999999999999999 89999999997753
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=99.97 E-value=2.1e-29 Score=193.19 Aligned_cols=189 Identities=25% Similarity=0.385 Sum_probs=158.9
Q ss_pred cccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeCh--hHHHh-HHHhhCC
Q psy2961 2 LKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTE--EELRN-ISRDASI 78 (202)
Q Consensus 2 l~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~--~~~~~-~~~~~~~ 78 (202)
|++..++++|++|||+||+|++|.+++|+||++|+.+++++++++ +.+.++++|++++++| +++.+ +++.+.+
T Consensus 134 l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~----k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g 209 (326)
T COG0604 134 LFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSE----KLELLKELGADHVINYREEDFVEQVRELTGG 209 (326)
T ss_pred HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHH----HHHHHHhcCCCEEEcCCcccHHHHHHHHcCC
Confidence 556778999999999999999999999999999988888887775 4669999999999986 45888 9999988
Q ss_pred CCCeEEEecCCCchHHHHHHhcccCcEEEEEeccCC-CCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHH
Q psy2961 79 PKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSR-EPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELT 157 (202)
Q Consensus 79 ~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 157 (202)
.++|+|+|++|++.+...+.+|+++|+++.+|...+ ....++...++.+.+...++..... . ++...+.+.++.
T Consensus 210 ~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~---~--~~~~~~~~~~l~ 284 (326)
T COG0604 210 KGVDVVLDTVGGDTFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSR---D--PEALAEALAELF 284 (326)
T ss_pred CCceEEEECCCHHHHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceec---c--hHHHHHHHHHHH
Confidence 899999999999999999999999999999998773 4445555666677788887775543 1 156688899999
Q ss_pred HHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 158 EMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 158 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
+++.+|.+++.++.+||+++..++...... .++..||+|+++
T Consensus 285 ~~~~~g~l~~~i~~~~~l~e~~~a~a~~~~-~~~~~GKvvl~~ 326 (326)
T COG0604 285 DLLASGKLKPVIDRVYPLAEAPAAAAHLLL-ERRTTGKVVLKV 326 (326)
T ss_pred HHHHcCCCcceeccEechhhhHHHHHHHHc-ccCCcceEEEeC
Confidence 999999999999999999998777776652 247889999974
No 3
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=99.96 E-value=3.4e-28 Score=189.14 Aligned_cols=187 Identities=21% Similarity=0.256 Sum_probs=153.4
Q ss_pred cccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHH-hcCCceEeChh---HHHh-HHHhh
Q psy2961 2 LKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK-SLGADYVFTEE---ELRN-ISRDA 76 (202)
Q Consensus 2 l~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~-~lg~~~v~~~~---~~~~-~~~~~ 76 (202)
|.+.+++++|++|||+|++|++|++++|+|+.+|++|++++++++ +.+.++ ++|++.++++. ++.+ +.+.+
T Consensus 150 l~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~----k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~ 225 (348)
T PLN03154 150 FYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ----KVDLLKNKLGFDEAFNYKEEPDLDAALKRYF 225 (348)
T ss_pred HHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHH----HHHHHHHhcCCCEEEECCCcccHHHHHHHHC
Confidence 345678899999999999889999999999999999988887765 578886 79999999763 4556 76666
Q ss_pred CCCCCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcC-----CCcccccccCeeEEEEechhHhhhcccHHHHHH
Q psy2961 77 SIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQ-----IPTSAFIFKDITLRGHWMTRWQKENKESAERKS 151 (202)
Q Consensus 77 ~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 151 (202)
+ .++|++|||+|+..+...+++++++|+++.+|........ ++...++.+++++.|++...|.. ...+
T Consensus 226 ~-~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~------~~~~ 298 (348)
T PLN03154 226 P-EGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLH------LFPQ 298 (348)
T ss_pred C-CCcEEEEECCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHH------HHHH
Confidence 4 5899999999988777799999999999999965433211 23345677899999988655421 2346
Q ss_pred HHHHHHHHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEeec
Q psy2961 152 MMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 201 (202)
Q Consensus 152 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~~ 201 (202)
.++++.+++++|++++.+..+|+|+++++||+.+. +++..||+||++.
T Consensus 299 ~~~~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l~--~g~~~GKvVl~~~ 346 (348)
T PLN03154 299 FLENVSRYYKQGKIVYIEDMSEGLESAPAALVGLF--SGKNVGKQVIRVA 346 (348)
T ss_pred HHHHHHHHHHCCCccCceecccCHHHHHHHHHHHH--cCCCCceEEEEec
Confidence 78999999999999998888999999999999999 8888999999875
No 4
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=99.96 E-value=4e-28 Score=182.91 Aligned_cols=174 Identities=23% Similarity=0.336 Sum_probs=150.9
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCCCC
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPKP 81 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~~~ 81 (202)
..+++||++|+|+|+| ++|++++|+|+.+|++|++++++++ +++.++++|++++++.. +..+ +++ .+
T Consensus 161 ~~~~~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~----K~e~a~~lGAd~~i~~~~~~~~~~~~~-----~~ 230 (339)
T COG1064 161 KANVKPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEE----KLELAKKLGADHVINSSDSDALEAVKE-----IA 230 (339)
T ss_pred hcCCCCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChH----HHHHHHHhCCcEEEEcCCchhhHHhHh-----hC
Confidence 4789999999999999 9999999999999999999999987 68999999999999743 3333 333 28
Q ss_pred eEEEecCCCchHHHHHHhcccCcEEEEEeccC-CCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHH
Q psy2961 82 KLALNCVGGNSATNLLRTLVSKGVMVTYGGMS-REPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMM 160 (202)
Q Consensus 82 d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (202)
|+++|+++...+..+++.|+++|+++.+|... .....++...++.+++++.|+...+ +.++++++++.
T Consensus 231 d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~-----------~~d~~e~l~f~ 299 (339)
T COG1064 231 DAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT-----------RADLEEALDFA 299 (339)
T ss_pred cEEEECCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC-----------HHHHHHHHHHH
Confidence 99999999445566999999999999999764 3444567777889999999999765 56699999999
Q ss_pred HcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEeec
Q psy2961 161 RTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 201 (202)
Q Consensus 161 ~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~~ 201 (202)
.+|+++|.+.+.++++++++||+.|. +++..|++||++.
T Consensus 300 ~~g~Ikp~i~e~~~l~~in~A~~~m~--~g~v~gR~Vi~~~ 338 (339)
T COG1064 300 AEGKIKPEILETIPLDEINEAYERME--KGKVRGRAVIDMS 338 (339)
T ss_pred HhCCceeeEEeeECHHHHHHHHHHHH--cCCeeeEEEecCC
Confidence 99999999878999999999999999 9999999999875
No 5
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.96 E-value=9.4e-28 Score=175.08 Aligned_cols=188 Identities=20% Similarity=0.257 Sum_probs=162.4
Q ss_pred cccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHh-cCCceEeCh--hHHHh-HHHhhC
Q psy2961 2 LKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADYVFTE--EELRN-ISRDAS 77 (202)
Q Consensus 2 l~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~-lg~~~v~~~--~~~~~-~~~~~~ 77 (202)
|.+++++++|++|+|.+|+|++|..+.|+||..|++|+.++++++ |.+++.+ +|.+.++|| +++.+ +.+.+.
T Consensus 142 Ll~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~e----K~~~l~~~lGfD~~idyk~~d~~~~L~~a~P 217 (340)
T COG2130 142 LLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAE----KCDFLTEELGFDAGIDYKAEDFAQALKEACP 217 (340)
T ss_pred HHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHH----HHHHHHHhcCCceeeecCcccHHHHHHHHCC
Confidence 567899999999999999999999999999999999999999987 6899977 999999997 46777 888876
Q ss_pred CCCCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcC-C-----CcccccccCeeEEEEechhHhhhcccHHHHHH
Q psy2961 78 IPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQ-I-----PTSAFIFKDITLRGHWMTRWQKENKESAERKS 151 (202)
Q Consensus 78 ~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 151 (202)
.++|+.||++|++.+...+..|+..+|+++||....-+.+ . ....++.+.+++.|+....... ....+
T Consensus 218 -~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~-----~~~~e 291 (340)
T COG2130 218 -KGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYD-----QRFPE 291 (340)
T ss_pred -CCeEEEEEcCCchHHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhh-----hhhHH
Confidence 7999999999999999999999999999999965543222 1 2345667789999998743322 33468
Q ss_pred HHHHHHHHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEeec
Q psy2961 152 MMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 201 (202)
Q Consensus 152 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~~ 201 (202)
.++++.+|+.+|+|+...+.+-.+|++++||..+. +++.+||+|+++.
T Consensus 292 ~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl--~G~N~GK~vvKv~ 339 (340)
T COG2130 292 ALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLL--SGKNFGKLVVKVA 339 (340)
T ss_pred HHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHh--cCCccceEEEEec
Confidence 89999999999999998888888999999999999 9999999999985
No 6
>KOG0025|consensus
Probab=99.95 E-value=8.4e-27 Score=168.83 Aligned_cols=200 Identities=54% Similarity=0.843 Sum_probs=174.8
Q ss_pred CcccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHh--HHHh-hC
Q psy2961 1 MLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN--ISRD-AS 77 (202)
Q Consensus 1 ~l~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~--~~~~-~~ 77 (202)
||.+..++++||+|+-.|+.|++|++.+|+|+++|.+-|.++++...++|..+.++.+|+++|+.++++.. .... ..
T Consensus 151 mL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~ 230 (354)
T KOG0025|consen 151 MLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGD 230 (354)
T ss_pred HHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhcc
Confidence 46777889999999999999999999999999999999999999999999999999999999998776654 3332 33
Q ss_pred CCCCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHH
Q psy2961 78 IPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELT 157 (202)
Q Consensus 78 ~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 157 (202)
...+.+.++|+|+.....+.+.|..||.++.+|++...+...+...+++++++++|+|+..|...+..++...+.+.++.
T Consensus 231 ~~~prLalNcVGGksa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~ 310 (354)
T KOG0025|consen 231 NPRPRLALNCVGGKSATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELC 310 (354)
T ss_pred CCCceEEEeccCchhHHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999989999999999999999999999988866688889999999
Q ss_pred HHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEeec
Q psy2961 158 EMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 201 (202)
Q Consensus 158 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~~ 201 (202)
+++..|+|..+.....+|++...|++.... .-...+|-++.++
T Consensus 311 ~l~~~G~i~~~~~e~v~L~~~~tald~~L~-~~~~~~Kq~i~~e 353 (354)
T KOG0025|consen 311 DLYRRGKLKAPNCEKVPLADHKTALDAALS-KFGKSGKQIIVLE 353 (354)
T ss_pred HHHHcCeeccccceeeechhhhHHHHHHHH-HhccCCceEEEec
Confidence 999999999988889999999888887762 2233356666653
No 7
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=99.95 E-value=5.6e-26 Score=175.37 Aligned_cols=186 Identities=24% Similarity=0.395 Sum_probs=148.3
Q ss_pred cccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh---HHHh-HHHhhC
Q psy2961 2 LKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE---ELRN-ISRDAS 77 (202)
Q Consensus 2 l~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~---~~~~-~~~~~~ 77 (202)
|.+.+++++|++|||+|++|++|++++|+|+..|+++++++++++ +.+.++++|++.++++. ++.+ +....
T Consensus 130 l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~----~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~- 204 (325)
T TIGR02825 130 LLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDE----KVAYLKKLGFDVAFNYKTVKSLEETLKKAS- 204 (325)
T ss_pred HHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHcCCCEEEeccccccHHHHHHHhC-
Confidence 346678999999999999889999999999999999998887765 68899999999999754 3444 55544
Q ss_pred CCCCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCC----CcC--CCcccccccCeeEEEEechhHhhhcccHHHHHH
Q psy2961 78 IPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSRE----PVQ--IPTSAFIFKDITLRGHWMTRWQKENKESAERKS 151 (202)
Q Consensus 78 ~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 151 (202)
+.++|++||++|++.+...+++++++|+++.+|..... ... .....++.+++++.++....|.. ....+
T Consensus 205 ~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~ 279 (325)
T TIGR02825 205 PDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQG-----EVRQK 279 (325)
T ss_pred CCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhh-----hhhHH
Confidence 46899999999998887799999999999999854321 111 11233456788888876544322 23356
Q ss_pred HHHHHHHHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 152 MMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 152 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
.++++++++.+|++++.+..+|+++++++||+.+. +++..||+|++
T Consensus 280 ~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~--~~~~~gkvVv~ 325 (325)
T TIGR02825 280 ALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGML--KGENLGKTIVK 325 (325)
T ss_pred HHHHHHHHHHCCCcccceeccccHHHHHHHHHHHh--cCCCCCeEEeC
Confidence 78999999999999988778899999999999999 88888999974
No 8
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=99.94 E-value=9.9e-26 Score=174.88 Aligned_cols=186 Identities=20% Similarity=0.268 Sum_probs=149.3
Q ss_pred cccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHh-cCCceEeCh---hHHHh-HHHhh
Q psy2961 2 LKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADYVFTE---EELRN-ISRDA 76 (202)
Q Consensus 2 l~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~-lg~~~v~~~---~~~~~-~~~~~ 76 (202)
|.+.+++++|++|||+|++|++|++++|+|+.+|+++++++++++ +.+.+++ +|+++++++ .++.+ +.+.+
T Consensus 143 l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~----~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~ 218 (338)
T cd08295 143 FYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDE----KVDLLKNKLGFDDAFNYKEEPDLDAALKRYF 218 (338)
T ss_pred HHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHhcCCceeEEcCCcccHHHHHHHhC
Confidence 345678999999999999889999999999999999999887765 6888888 999998874 25666 76666
Q ss_pred CCCCCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCc-----CCCcccccccCeeEEEEechhHhhhcccHHHHHH
Q psy2961 77 SIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPV-----QIPTSAFIFKDITLRGHWMTRWQKENKESAERKS 151 (202)
Q Consensus 77 ~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 151 (202)
+ .++|++||++|+..+...+++++++|+++.+|....... ..+...++.+++++.++....+. ....+
T Consensus 219 ~-~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~~ 291 (338)
T cd08295 219 P-NGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYL------HRYPE 291 (338)
T ss_pred C-CCcEEEEECCCHHHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhH------HHHHH
Confidence 4 689999999998777779999999999999986443211 12234456677888886654332 22356
Q ss_pred HHHHHHHHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 152 MMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 152 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
.++++++++.+|++++.+...|+++++++|++.+. +++..||+|+++
T Consensus 292 ~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~--~~~~~GkvVl~~ 338 (338)
T cd08295 292 FLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLF--TGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHh--cCCCCceEEEEC
Confidence 78899999999999987777899999999999999 888899999874
No 9
>KOG1198|consensus
Probab=99.94 E-value=5.6e-26 Score=174.56 Aligned_cols=186 Identities=21% Similarity=0.273 Sum_probs=137.9
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhH--HHh-HHHhhCCCCCeE
Q psy2961 7 SLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIPKPKL 83 (202)
Q Consensus 7 ~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~--~~~-~~~~~~~~~~d~ 83 (202)
++++|++|||+|++|++|++++|+|++.|+.+++++++.+ ..++++++|+++++||++ ..+ +++.+ +.++|+
T Consensus 154 ~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e----~~~l~k~lGAd~vvdy~~~~~~e~~kk~~-~~~~Dv 228 (347)
T KOG1198|consen 154 KLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKE----KLELVKKLGADEVVDYKDENVVELIKKYT-GKGVDV 228 (347)
T ss_pred ccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccc----hHHHHHHcCCcEeecCCCHHHHHHHHhhc-CCCccE
Confidence 8999999999999999999999999999955555555555 489999999999999754 666 77777 789999
Q ss_pred EEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCccccc--ccCeeEE--EEechhHhhhcccHHHHHHHHHHHHHH
Q psy2961 84 ALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFI--FKDITLR--GHWMTRWQKENKESAERKSMMNELTEM 159 (202)
Q Consensus 84 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (202)
||||+|+........++..+|+...++.............+. .+.+.+. +.....+.... .....+.++.+.++
T Consensus 229 VlD~vg~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~l~~~ 306 (347)
T KOG1198|consen 229 VLDCVGGSTLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLY--FVPSAEYLKALVEL 306 (347)
T ss_pred EEECCCCCccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeee--ecCCHHHHHHHHHH
Confidence 999999998777888888888766665444332222211111 1111111 11111111100 02236779999999
Q ss_pred HHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEeec
Q psy2961 160 MRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 201 (202)
Q Consensus 160 ~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~~ 201 (202)
++.|+++|.+.+.||++++.+||+.+. +++..||+++.++
T Consensus 307 ie~gkikp~i~~~~p~~~~~ea~~~~~--~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 307 IEKGKIKPVIDSVYPFSQAKEAFEKLE--KSHATGKVVLEKD 346 (347)
T ss_pred HHcCcccCCcceeeeHHHHHHHHHHHh--hcCCcceEEEEec
Confidence 999999999999999999999999999 8888999999875
No 10
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=99.94 E-value=2.8e-25 Score=171.63 Aligned_cols=186 Identities=26% Similarity=0.391 Sum_probs=149.5
Q ss_pred cccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCC
Q psy2961 2 LKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASI 78 (202)
Q Consensus 2 l~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~ 78 (202)
|.+.+++++|++|||+|++|++|++++|+|+..|+++++++++++ +.+.++++|+++++++. ++.+ +++.++
T Consensus 135 l~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~----~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~- 209 (329)
T cd08294 135 LLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDD----KVAWLKELGFDAVFNYKTVSLEEALKEAAP- 209 (329)
T ss_pred HHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHcCCCEEEeCCCccHHHHHHHHCC-
Confidence 345678999999999999889999999999999999998887775 68999999999999753 5556 766665
Q ss_pred CCCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCc------CCCcccccccCeeEEEEechhHhhhcccHHHHHHH
Q psy2961 79 PKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPV------QIPTSAFIFKDITLRGHWMTRWQKENKESAERKSM 152 (202)
Q Consensus 79 ~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 152 (202)
.++|++||++|++.....+++++++|+++.+|....... ......++.+++++.++....+. ....+.
T Consensus 210 ~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~ 283 (329)
T cd08294 210 DGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQ------DRWPEA 283 (329)
T ss_pred CCcEEEEECCCHHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhH------HHHHHH
Confidence 689999999999777779999999999999985432111 11122355678888887654431 234567
Q ss_pred HHHHHHHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 153 MNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 153 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
++++++++++|++++.+..+++++++++||+.+. +++..||+|+++
T Consensus 284 ~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~--~~~~~gkvvv~~ 329 (329)
T cd08294 284 LKQLLKWIKEGKLKYREHVTEGFENMPQAFIGML--KGENTGKAIVKV 329 (329)
T ss_pred HHHHHHHHHCCCCcCCcccccCHHHHHHHHHHHH--cCCCCCeEEEeC
Confidence 8899999999999987667899999999999999 888889999864
No 11
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=99.94 E-value=5.7e-25 Score=172.58 Aligned_cols=180 Identities=16% Similarity=0.204 Sum_probs=144.5
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHhcCCceEeCh--hHHHh-HHHhhCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTE--EELRN-ISRDASI 78 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~--~~~~~-~~~~~~~ 78 (202)
.+.+++++|++|+|+|++ ++|++++|+|+..|+ +|+++..+++ +++.++++|++.++++ .++.+ +++.+.+
T Consensus 184 ~~~~~i~~g~~VlV~G~G-~vG~~a~~lak~~G~~~Vi~~~~~~~----r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~ 258 (371)
T cd08281 184 VNTAGVRPGQSVAVVGLG-GVGLSALLGAVAAGASQVVAVDLNED----KLALARELGATATVNAGDPNAVEQVRELTGG 258 (371)
T ss_pred HhccCCCCCCEEEEECCC-HHHHHHHHHHHHcCCCcEEEEcCCHH----HHHHHHHcCCceEeCCCchhHHHHHHHHhCC
Confidence 356778999999999975 999999999999999 5777766654 6889999999999875 34556 7777665
Q ss_pred CCCeEEEecCCCch-HHHHHHhcccCcEEEEEeccCC-CCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHH
Q psy2961 79 PKPKLALNCVGGNS-ATNLLRTLVSKGVMVTYGGMSR-EPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNEL 156 (202)
Q Consensus 79 ~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 156 (202)
++|++|||+|.+. ....+++++++|+++.+|.... ....++...++.+++++.|++...+.. .+.+.++
T Consensus 259 -g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~--------~~~~~~~ 329 (371)
T cd08281 259 -GVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSYMGSCVP--------RRDIPRY 329 (371)
T ss_pred -CCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEecCCCCh--------HHHHHHH
Confidence 8999999999764 4458999999999999996543 233556666788999999988665421 3457888
Q ss_pred HHHHHcCCCCC--CcceeechhhHHHHHHHHhhhcCCCCceEEE
Q psy2961 157 TEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 198 (202)
Q Consensus 157 ~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~ 198 (202)
++++.+|++++ .++++|+++++++||+.+. +++..+|+|+
T Consensus 330 ~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~--~~~~~~~vi~ 371 (371)
T cd08281 330 LALYLSGRLPVDKLLTHRLPLDEINEGFDRLA--AGEAVRQVIL 371 (371)
T ss_pred HHHHHcCCCCchhheeeeecHHHHHHHHHHHh--CCCceeeeeC
Confidence 99999999986 3789999999999999999 8888877764
No 12
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=99.93 E-value=1.8e-24 Score=166.89 Aligned_cols=178 Identities=22% Similarity=0.381 Sum_probs=145.4
Q ss_pred CCCEEEEe-CCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeCh--hHHHh-HHHhhCCCCCeEEE
Q psy2961 10 PGDVVIQN-GANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTE--EELRN-ISRDASIPKPKLAL 85 (202)
Q Consensus 10 ~g~~VlI~-g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~--~~~~~-~~~~~~~~~~d~vi 85 (202)
++++++|+ +++|++|++++|+|+..|+++++++++++ +.+.++++|+++++++ .++.+ +++.+.+.++|++|
T Consensus 142 ~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~----~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vi 217 (324)
T cd08291 142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKE----QVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFF 217 (324)
T ss_pred CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEE
Confidence 45666665 78789999999999999999998887765 6888999999999875 35666 77777777899999
Q ss_pred ecCCCchHHHHHHhcccCcEEEEEeccCCCCc-CCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHcCC
Q psy2961 86 NCVGGNSATNLLRTLVSKGVMVTYGGMSREPV-QIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGK 164 (202)
Q Consensus 86 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 164 (202)
|++|+......+++++++|+++.+|....... .++...++.+++++.+++...+.... ..+.++++.++++ +.
T Consensus 218 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~ 291 (324)
T cd08291 218 DAVGGGLTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKL-----GPEVVKKLKKLVK-TE 291 (324)
T ss_pred ECCCcHHHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhccc-----CHHHHHHHHHHHh-Cc
Confidence 99999888788999999999999996544332 24455667889999999877654321 2456888888888 99
Q ss_pred CCCCcceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 165 LAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 165 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
+++.++++|+++++++||+.+. ++...||+++.
T Consensus 292 ~~~~i~~~~~l~~~~~a~~~~~--~~~~~Gkvv~~ 324 (324)
T cd08291 292 LKTTFASRYPLALTLEAIAFYS--KNMSTGKKLLI 324 (324)
T ss_pred cccceeeEEcHHHHHHHHHHHH--hCCCCCeEEeC
Confidence 9998999999999999999999 88888999974
No 13
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=99.93 E-value=1.5e-24 Score=168.60 Aligned_cols=173 Identities=19% Similarity=0.262 Sum_probs=137.0
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcCCceEeChhH--HHhHHHhhCCCCCe
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRNISRDASIPKPK 82 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~--~~~~~~~~~~~~~d 82 (202)
....+|++|+|+|+ |++|++++|+|+.+|++ ++++.++++ +++.++++|++.++++.+ +.++.+. .+++|
T Consensus 165 ~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~----~~~~a~~lGa~~vi~~~~~~~~~~~~~--~g~~D 237 (343)
T PRK09880 165 AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPR----SLSLAREMGADKLVNPQNDDLDHYKAE--KGYFD 237 (343)
T ss_pred cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHH----HHHHHHHcCCcEEecCCcccHHHHhcc--CCCCC
Confidence 34568999999997 59999999999999995 666666654 789999999999997543 3332221 23699
Q ss_pred EEEecCCCch-HHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHH
Q psy2961 83 LALNCVGGNS-ATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMR 161 (202)
Q Consensus 83 ~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (202)
++|||+|++. ...++++++++|+++.+|... ....++...++.+++++.++... .+.+++++++++
T Consensus 238 ~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~~k~~~i~g~~~~------------~~~~~~~~~l~~ 304 (343)
T PRK09880 238 VSFEVSGHPSSINTCLEVTRAKGVMVQVGMGG-APPEFPMMTLIVKEISLKGSFRF------------TEEFNTAVSWLA 304 (343)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEEccCC-CCCccCHHHHHhCCcEEEEEeec------------cccHHHHHHHHH
Confidence 9999999865 456899999999999999533 33456666677889999987632 234889999999
Q ss_pred cCCCCC--CcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 162 TGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 162 ~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
+|++++ .++++|+++++++||+.+. ++...||+++.+
T Consensus 305 ~g~i~~~~~i~~~~~l~~~~~A~~~~~--~~~~~gKvvl~~ 343 (343)
T PRK09880 305 NGVINPLPLLSAEYPFTDLEEALIFAG--DKTQAAKVQLVF 343 (343)
T ss_pred cCCCCchhheEEEEEHHHHHHHHHHHh--cCCCceEEEEeC
Confidence 999986 4679999999999999998 777789999874
No 14
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=99.93 E-value=1.9e-24 Score=168.95 Aligned_cols=181 Identities=15% Similarity=0.191 Sum_probs=142.8
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASI 78 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~ 78 (202)
.+.+++++|++|||+|+ |++|++++|+|+..|++ |+++.++++ +++.++++|++.++++. ++.+ +.+.+++
T Consensus 169 ~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~----~~~~~~~~Ga~~~i~~~~~~~~~~i~~~~~~ 243 (358)
T TIGR03451 169 VNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDR----KLEWAREFGATHTVNSSGTDPVEAIRALTGG 243 (358)
T ss_pred HhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHH----HHHHHHHcCCceEEcCCCcCHHHHHHHHhCC
Confidence 34567899999999986 59999999999999996 666666554 78899999999988753 4556 7777777
Q ss_pred CCCeEEEecCCCch-HHHHHHhcccCcEEEEEeccCCC-CcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHH
Q psy2961 79 PKPKLALNCVGGNS-ATNLLRTLVSKGVMVTYGGMSRE-PVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNEL 156 (202)
Q Consensus 79 ~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 156 (202)
.++|++|||+|++. ...++++++++|+++.+|..... ...++...++.+++++.+++...+. ..+.++++
T Consensus 244 ~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~~~~~~ 315 (358)
T TIGR03451 244 FGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCL--------PERDFPML 315 (358)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCC--------cHHHHHHH
Confidence 78999999999764 45588999999999999965432 2345555677888999887643211 13458889
Q ss_pred HHHHHcCCCCC--CcceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 157 TEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 157 ~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
++++.+|++++ .++++||++++++||+.+. +++.. |+++.
T Consensus 316 ~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~--~~~~~-k~~~~ 357 (358)
T TIGR03451 316 VDLYLQGRLPLDAFVTERIGLDDVEEAFDKMH--AGDVL-RSVVE 357 (358)
T ss_pred HHHHHcCCCCchheEEEEecHHHHHHHHHHHh--CCCcc-eeEEe
Confidence 99999999986 3789999999999999998 66654 77775
No 15
>KOG0024|consensus
Probab=99.93 E-value=3.3e-24 Score=158.09 Aligned_cols=180 Identities=20% Similarity=0.298 Sum_probs=150.0
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeCh------hHHHh-HHHhh
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTE------EELRN-ISRDA 76 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~------~~~~~-~~~~~ 76 (202)
+++++++|++|||+|+| ++|+.+...|+.+|+..|++++-.+. |++.++++|++.+.+. .++.+ +....
T Consensus 163 r~~~vk~Gs~vLV~GAG-PIGl~t~l~Aka~GA~~VVi~d~~~~---Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~ 238 (354)
T KOG0024|consen 163 RRAGVKKGSKVLVLGAG-PIGLLTGLVAKAMGASDVVITDLVAN---RLELAKKFGATVTDPSSHKSSPQELAELVEKAL 238 (354)
T ss_pred hhcCcccCCeEEEECCc-HHHHHHHHHHHHcCCCcEEEeecCHH---HHHHHHHhCCeEEeeccccccHHHHHHHHHhhc
Confidence 57899999999999999 99999999999999987777766554 8999999999988842 33445 55555
Q ss_pred CCCCCeEEEecCCCchHHH-HHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHH
Q psy2961 77 SIPKPKLALNCVGGNSATN-LLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNE 155 (202)
Q Consensus 77 ~~~~~d~vid~~g~~~~~~-~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 155 (202)
+...+|+.|||+|.....+ ++..++++|++++++ ......+++......+++.+.|++.+. ..++..
T Consensus 239 g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg-~g~~~~~fpi~~v~~kE~~~~g~fry~-----------~~~y~~ 306 (354)
T KOG0024|consen 239 GKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVG-MGAEEIQFPIIDVALKEVDLRGSFRYC-----------NGDYPT 306 (354)
T ss_pred cccCCCeEEEccCchHHHHHHHHHhccCCEEEEec-cCCCccccChhhhhhheeeeeeeeeec-----------cccHHH
Confidence 5566999999999888776 789999999988877 555567889889999999999998553 346999
Q ss_pred HHHHHHcCCCCC--CcceeechhhHHHHHHHHhhhcCC-CCceEEEeec
Q psy2961 156 LTEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGK-SGVKYYIDFR 201 (202)
Q Consensus 156 ~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~-~~gkvv~~~~ 201 (202)
.++++++|++.. .+++.|+++++++||+... .++ ...|+++..+
T Consensus 307 ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~--~~~~~~iKv~i~~~ 353 (354)
T KOG0024|consen 307 AIELVSSGKIDVKPLITHRYKFDDADEAFETLQ--HGEEGVIKVIITGP 353 (354)
T ss_pred HHHHHHcCCcCchhheecccccchHHHHHHHHH--hCcCCceEEEEeCC
Confidence 999999999886 4899999999999999998 444 3569998764
No 16
>PLN02827 Alcohol dehydrogenase-like
Probab=99.93 E-value=4.2e-24 Score=167.91 Aligned_cols=180 Identities=20% Similarity=0.311 Sum_probs=142.1
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEE-EEecCcccHHHHHHHHHhcCCceEeChh----HHHh-HHHhhC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTI-NIVRNRDDIDKLKSYLKSLGADYVFTEE----ELRN-ISRDAS 77 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi-~~~~~~~~~~~~~~~~~~lg~~~v~~~~----~~~~-~~~~~~ 77 (202)
+.+++++|++|||+|+| ++|++++|+|+..|++++ ++..+++ +.+.++++|++.++++. ++.+ +++.+.
T Consensus 187 ~~~~~~~g~~VlV~G~G-~vG~~~iqlak~~G~~~vi~~~~~~~----~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~ 261 (378)
T PLN02827 187 NVADVSKGSSVVIFGLG-TVGLSVAQGAKLRGASQIIGVDINPE----KAEKAKTFGVTDFINPNDLSEPIQQVIKRMTG 261 (378)
T ss_pred hhcCCCCCCEEEEECCC-HHHHHHHHHHHHcCCCeEEEECCCHH----HHHHHHHcCCcEEEcccccchHHHHHHHHHhC
Confidence 45678999999999975 999999999999999644 4444543 68899999999988753 4555 777766
Q ss_pred CCCCeEEEecCCCch-HHHHHHhcccC-cEEEEEeccCCCCcCCCc-ccccccCeeEEEEechhHhhhcccHHHHHHHHH
Q psy2961 78 IPKPKLALNCVGGNS-ATNLLRTLVSK-GVMVTYGGMSREPVQIPT-SAFIFKDITLRGHWMTRWQKENKESAERKSMMN 154 (202)
Q Consensus 78 ~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 154 (202)
+ ++|++||++|.+. +...+++++++ |+++.+|..... ..++. ..++.+++++.|+....|.. ...+.
T Consensus 262 ~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~--------~~~~~ 331 (378)
T PLN02827 262 G-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK-PEVSAHYGLFLSGRTLKGSLFGGWKP--------KSDLP 331 (378)
T ss_pred C-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC-ccccccHHHHhcCceEEeeecCCCch--------hhhHH
Confidence 4 8999999999874 55689999998 999999965432 23333 34677899999987654321 33578
Q ss_pred HHHHHHHcCCCCC--CcceeechhhHHHHHHHHhhhcCCCCceEEEeec
Q psy2961 155 ELTEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 201 (202)
Q Consensus 155 ~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~~ 201 (202)
++++++.+|++++ .++++|+++++++||+.+. +++. .|+||++.
T Consensus 332 ~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~--~~~~-~k~vi~~~ 377 (378)
T PLN02827 332 SLVDKYMNKEIMIDEFITHNLSFDEINKAFELMR--EGKC-LRCVIHMP 377 (378)
T ss_pred HHHHHHHcCCCChHHheEEEecHHHHHHHHHHHH--CCCc-eEEEEEec
Confidence 8999999999998 5889999999999999998 7765 69999874
No 17
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=99.93 E-value=8.9e-24 Score=164.34 Aligned_cols=185 Identities=21% Similarity=0.353 Sum_probs=139.1
Q ss_pred ccccCCCCC--CEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHh-cCCceEeCh--hHHHh-HHHh
Q psy2961 3 KDYNSLSPG--DVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKS-LGADYVFTE--EELRN-ISRD 75 (202)
Q Consensus 3 ~~~~~~~~g--~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~-lg~~~v~~~--~~~~~-~~~~ 75 (202)
.+.+++++| ++|||+|++|++|++++|+|+++|+ +|++++++++ +.+.+++ +|++.++++ .++.+ +++.
T Consensus 145 ~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~----~~~~~~~~lGa~~vi~~~~~~~~~~i~~~ 220 (345)
T cd08293 145 QEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDE----KCQLLKSELGFDAAINYKTDNVAERLREL 220 (345)
T ss_pred HHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHH----HHHHHHHhcCCcEEEECCCCCHHHHHHHH
Confidence 345667776 9999999988999999999999999 7888887765 5777765 999998875 35666 7776
Q ss_pred hCCCCCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCC--CcCCCc------ccc-cccCeeEEEEechhHhhhcccH
Q psy2961 76 ASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSRE--PVQIPT------SAF-IFKDITLRGHWMTRWQKENKES 146 (202)
Q Consensus 76 ~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~------~~~-~~~~~~~~g~~~~~~~~~~~~~ 146 (202)
++ .++|++||++|+......+++|+++|+++.+|..... ....+. ..+ ..+++++..+....+ +
T Consensus 221 ~~-~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 293 (345)
T cd08293 221 CP-EGVDVYFDNVGGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNY------K 293 (345)
T ss_pred CC-CCceEEEECCCcHHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeecc------H
Confidence 65 6899999999998877799999999999999853221 111110 011 123444444332111 1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 147 AERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 147 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
....+.++++.+++.+|++++.+..+++++++++||+.+. +++..||+|+++
T Consensus 294 ~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~--~~~~~gkvvl~~ 345 (345)
T cd08293 294 DKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMM--NGGNIGKQIVKV 345 (345)
T ss_pred hHHHHHHHHHHHHHHCCCccceeEEeecHHHHHHHHHHHh--cCCCCCeEEEEC
Confidence 3345678889999999999987666779999999999998 888889999875
No 18
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=99.93 E-value=5.8e-24 Score=166.15 Aligned_cols=175 Identities=17% Similarity=0.299 Sum_probs=138.3
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEE
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLA 84 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~v 84 (202)
...+++|++|+|.|+| ++|++++|+|+.+|+++++++.++++ +.+.++++|++.++++.+...+.+.+ .++|++
T Consensus 178 ~~~~~~g~~VlV~G~G-~vG~~avq~Ak~~Ga~vi~~~~~~~~---~~~~~~~~Ga~~vi~~~~~~~~~~~~--~~~D~v 251 (360)
T PLN02586 178 YGMTEPGKHLGVAGLG-GLGHVAVKIGKAFGLKVTVISSSSNK---EDEAINRLGADSFLVSTDPEKMKAAI--GTMDYI 251 (360)
T ss_pred hcccCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCcch---hhhHHHhCCCcEEEcCCCHHHHHhhc--CCCCEE
Confidence 3456799999998875 99999999999999998887776653 35566889999998754432255544 269999
Q ss_pred EecCCCch-HHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHcC
Q psy2961 85 LNCVGGNS-ATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTG 163 (202)
Q Consensus 85 id~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 163 (202)
||++|.+. +...+++++++|+++.+|... ....++...++.++..+.++.... ...++++++++++|
T Consensus 252 id~~g~~~~~~~~~~~l~~~G~iv~vG~~~-~~~~~~~~~~~~~~~~i~g~~~~~-----------~~~~~~~~~li~~g 319 (360)
T PLN02586 252 IDTVSAVHALGPLLGLLKVNGKLITLGLPE-KPLELPIFPLVLGRKLVGGSDIGG-----------IKETQEMLDFCAKH 319 (360)
T ss_pred EECCCCHHHHHHHHHHhcCCcEEEEeCCCC-CCCccCHHHHHhCCeEEEEcCcCC-----------HHHHHHHHHHHHhC
Confidence 99999864 456899999999999998543 334566666677788887776432 23588899999999
Q ss_pred CCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 164 KLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 164 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
++++.+ ++|+|+++++||+.+. +++..||+|+.+
T Consensus 320 ~i~~~~-~~~~l~~~~~A~~~~~--~~~~~gkvvi~~ 353 (360)
T PLN02586 320 NITADI-ELIRMDEINTAMERLA--KSDVRYRFVIDV 353 (360)
T ss_pred CCCCcE-EEEeHHHHHHHHHHHH--cCCCcEEEEEEc
Confidence 999866 6899999999999999 888889999976
No 19
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=99.93 E-value=6.5e-24 Score=164.75 Aligned_cols=175 Identities=26% Similarity=0.300 Sum_probs=140.7
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcCCceEeChhH-HHh-HHHhhCCCCC
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEEE-LRN-ISRDASIPKP 81 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~-~~~-~~~~~~~~~~ 81 (202)
..++++|++|+|+|+ |++|++++|+|+.+|++ ++++.++++ +.+.++++|++.++++.+ ..+ +.+.+.+.++
T Consensus 158 ~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~----~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~ 232 (339)
T cd08239 158 RVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPE----RLELAKALGADFVINSGQDDVQEIRELTSGAGA 232 (339)
T ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH----HHHHHHHhCCCEEEcCCcchHHHHHHHhCCCCC
Confidence 456789999999987 59999999999999999 777766654 688889999999987532 144 7676766789
Q ss_pred eEEEecCCCchH-HHHHHhcccCcEEEEEeccCCCCcCCCc-ccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHH
Q psy2961 82 KLALNCVGGNSA-TNLLRTLVSKGVMVTYGGMSREPVQIPT-SAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEM 159 (202)
Q Consensus 82 d~vid~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (202)
|++|||+|++.. ...+++++++|+++.+|..... .++. ..++.+++++.|++... .+.+.+++++
T Consensus 233 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~-----------~~~~~~~~~~ 299 (339)
T cd08239 233 DVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL--TIEVSNDLIRKQRTLIGSWYFS-----------VPDMEECAEF 299 (339)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc--ccCcHHHHHhCCCEEEEEecCC-----------HHHHHHHHHH
Confidence 999999998876 4589999999999999965432 2332 35677899999987542 3458889999
Q ss_pred HHcCCCCC--CcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 160 MRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 160 ~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
+.+|++.+ .++++|+++++++||+.+. ++. .||+|++|
T Consensus 300 ~~~g~i~~~~~i~~~~~l~~~~~a~~~~~--~~~-~gKvvi~~ 339 (339)
T cd08239 300 LARHKLEVDRLVTHRFGLDQAPEAYALFA--QGE-SGKVVFVF 339 (339)
T ss_pred HHcCCCChhHeEEEEecHHHHHHHHHHHH--cCC-ceEEEEeC
Confidence 99999875 4788999999999999988 665 68999975
No 20
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=99.92 E-value=8.7e-24 Score=165.78 Aligned_cols=172 Identities=16% Similarity=0.314 Sum_probs=139.7
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEec
Q psy2961 8 LSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNC 87 (202)
Q Consensus 8 ~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~ 87 (202)
.++|++|+|.|+| ++|++++|+|+.+|++++++++++++ +.+.++++|+++++++.+...+.+.+ .++|++|||
T Consensus 176 ~~~g~~VlV~G~G-~vG~~avq~Ak~~Ga~Vi~~~~~~~~---~~~~a~~lGa~~~i~~~~~~~v~~~~--~~~D~vid~ 249 (375)
T PLN02178 176 KESGKRLGVNGLG-GLGHIAVKIGKAFGLRVTVISRSSEK---EREAIDRLGADSFLVTTDSQKMKEAV--GTMDFIIDT 249 (375)
T ss_pred CCCCCEEEEEccc-HHHHHHHHHHHHcCCeEEEEeCChHH---hHHHHHhCCCcEEEcCcCHHHHHHhh--CCCcEEEEC
Confidence 3689999999885 99999999999999998888776542 46788899999998765432255554 369999999
Q ss_pred CCCch-HHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHcCCCC
Q psy2961 88 VGGNS-ATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLA 166 (202)
Q Consensus 88 ~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 166 (202)
+|.+. +...+++++++|+++.+|... ....++...++.+++++.|+.... .+.+.++++++.+|+++
T Consensus 250 ~G~~~~~~~~~~~l~~~G~iv~vG~~~-~~~~~~~~~~~~~~~~i~g~~~~~-----------~~~~~~~~~l~~~g~i~ 317 (375)
T PLN02178 250 VSAEHALLPLFSLLKVSGKLVALGLPE-KPLDLPIFPLVLGRKMVGGSQIGG-----------MKETQEMLEFCAKHKIV 317 (375)
T ss_pred CCcHHHHHHHHHhhcCCCEEEEEccCC-CCCccCHHHHHhCCeEEEEeCccC-----------HHHHHHHHHHHHhCCCc
Confidence 99874 456899999999999998543 344566667778899999877542 24588899999999999
Q ss_pred CCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 167 APAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 167 ~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
+.+ ++|||+++++||+.+. +++..||+|+.+
T Consensus 318 ~~i-~~~~l~~~~~A~~~~~--~~~~~gkvvi~~ 348 (375)
T PLN02178 318 SDI-ELIKMSDINSAMDRLA--KSDVRYRFVIDV 348 (375)
T ss_pred ccE-EEEeHHHHHHHHHHHH--cCCCceEEEEEe
Confidence 876 6799999999999999 888889999986
No 21
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=99.92 E-value=2.2e-23 Score=160.75 Aligned_cols=188 Identities=32% Similarity=0.505 Sum_probs=153.3
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCCCC
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPKP 81 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~~~ 81 (202)
.+++++|++|+|+|+++++|++++|+|+.+|+++++++++++ +.+.++++|++.++++. ++.. +.+.+.+.++
T Consensus 134 ~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~ 209 (324)
T cd08292 134 FLGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDA----GVAELRALGIGPVVSTEQPGWQDKVREAAGGAPI 209 (324)
T ss_pred hhCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHH----HHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCC
Confidence 367889999999999889999999999999999999988876 46777778998888753 4556 7788887899
Q ss_pred eEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHH
Q psy2961 82 KLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMR 161 (202)
Q Consensus 82 d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (202)
|++|||+|++.....+++++++|+++.+|........++....+.++.++.++....+..... +....+.+..+++++.
T Consensus 210 d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ 288 (324)
T cd08292 210 SVALDSVGGKLAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMS-VEYRKRMIAELLTLAL 288 (324)
T ss_pred cEEEECCCChhHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcC-HHHHHHHHHHHHHHHH
Confidence 999999999877779999999999999986543333444444567899999988766543321 1345678999999999
Q ss_pred cCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 162 TGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 162 ~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
+|.+.+.+.++|+++++++||+.+. .+...+|++++
T Consensus 289 ~g~i~~~~~~~~~~~~~~~a~~~~~--~~~~~~kvvv~ 324 (324)
T cd08292 289 KGQLLLPVEAVFDLGDAAKAAAASM--RPGRAGKVLLR 324 (324)
T ss_pred CCCccCccccEecHHHHHHHHHHHH--cCCCCceEEeC
Confidence 9999977788999999999999998 77778899874
No 22
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=99.92 E-value=8.3e-24 Score=164.67 Aligned_cols=182 Identities=19% Similarity=0.195 Sum_probs=140.2
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcE-EEEecCcccHHHHHHHHHhcCCceEeChhH-HHh-HHHhhCCCCC
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLKT-INIVRNRDDIDKLKSYLKSLGADYVFTEEE-LRN-ISRDASIPKP 81 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~v-i~~~~~~~~~~~~~~~~~~lg~~~v~~~~~-~~~-~~~~~~~~~~ 81 (202)
.+.+++|++|+|+|+ |++|++++|+|+.+|+++ +++.++++ +++.++++|++.++++.+ ... +.+.+.+.++
T Consensus 155 ~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~----~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~ 229 (347)
T PRK10309 155 LAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSE----KLALAKSLGAMQTFNSREMSAPQIQSVLRELRF 229 (347)
T ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHH----HHHHHHHcCCceEecCcccCHHHHHHHhcCCCC
Confidence 456789999999986 599999999999999984 55555554 678889999999887532 133 6666666688
Q ss_pred e-EEEecCCCchH-HHHHHhcccCcEEEEEeccCCCCcCCC---cccccccCeeEEEEechhHhhhcccHHHHHHHHHHH
Q psy2961 82 K-LALNCVGGNSA-TNLLRTLVSKGVMVTYGGMSREPVQIP---TSAFIFKDITLRGHWMTRWQKENKESAERKSMMNEL 156 (202)
Q Consensus 82 d-~vid~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 156 (202)
| ++|||+|++.. ..++++++++|+++.+|.... ...++ ...++.+++++.|++....... ..+.++++
T Consensus 230 d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~------~~~~~~~~ 302 (347)
T PRK10309 230 DQLILETAGVPQTVELAIEIAGPRAQLALVGTLHH-DLHLTSATFGKILRKELTVIGSWMNYSSPW------PGQEWETA 302 (347)
T ss_pred CeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CcccChhhhhHHhhcCcEEEEEeccccCCc------chhHHHHH
Confidence 8 99999998754 558999999999999996543 22232 2346678899999775421110 13457889
Q ss_pred HHHHHcCCCC--CCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 157 TEMMRTGKLA--APAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 157 ~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
++++.+|.+. +.++++|+|+++++||+.+. ++...||+|+++
T Consensus 303 ~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~--~~~~~gKvvv~~ 346 (347)
T PRK10309 303 SRLLTERKLSLEPLIAHRGSFESFAQAVRDLA--GNPMPGKVLLQI 346 (347)
T ss_pred HHHHHcCCCCchhheEEEeeHHHHHHHHHHHh--cCCcceEEEEeC
Confidence 9999999986 45889999999999999998 777789999976
No 23
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=99.92 E-value=1.9e-23 Score=162.74 Aligned_cols=176 Identities=19% Similarity=0.265 Sum_probs=141.7
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh-----HHHh-HHHhhCC
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE-----ELRN-ISRDASI 78 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~-----~~~~-~~~~~~~ 78 (202)
..++++|++|+|+|+ |++|++++|+|+..|++++++.++++ +++.++++|++.++++. ++.+ +++.+++
T Consensus 161 ~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~----~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~ 235 (349)
T TIGR03201 161 QAGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPE----KLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKA 235 (349)
T ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHH----HHHHHHHhCCceEecCccccHHHHHHHHHhhccc
Confidence 367889999999999 69999999999999999888777665 68889999999888742 4555 7777777
Q ss_pred CCCe----EEEecCCCchHH-HHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHH
Q psy2961 79 PKPK----LALNCVGGNSAT-NLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMM 153 (202)
Q Consensus 79 ~~~d----~vid~~g~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 153 (202)
.++| ++|||+|++... .++++++++|+++.+|.... ...++...++.++.++.|.+... .+.+
T Consensus 236 ~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~~~g~~~~~-----------~~~~ 303 (349)
T TIGR03201 236 RGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMA-KTEYRLSNLMAFHARALGNWGCP-----------PDRY 303 (349)
T ss_pred CCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCC-CcccCHHHHhhcccEEEEEecCC-----------HHHH
Confidence 7776 899999987765 47899999999999996543 23455556667778888876321 3458
Q ss_pred HHHHHHHHcCCCCCC-cceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 154 NELTEMMRTGKLAAP-AHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 154 ~~~~~~~~~g~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
.++++++++|++++. +.++|+++++++||+.+. +++..+|++++
T Consensus 304 ~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~~--~~~~~~k~~~~ 348 (349)
T TIGR03201 304 PAALDLVLDGKIQLGPFVERRPLDQIEHVFAAAH--HHKLKRRAILT 348 (349)
T ss_pred HHHHHHHHcCCCCcccceEEecHHHHHHHHHHHH--cCCccceEEec
Confidence 889999999999863 445799999999999999 88888999885
No 24
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=99.92 E-value=7.4e-24 Score=157.45 Aligned_cols=182 Identities=21% Similarity=0.248 Sum_probs=146.7
Q ss_pred cccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh---HHHh-HHHhhC
Q psy2961 2 LKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE---ELRN-ISRDAS 77 (202)
Q Consensus 2 l~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~---~~~~-~~~~~~ 77 (202)
..+.+++++|++|.|+|.+ ++|++++|-|+..|+..|..++..+. |+++++++|+++++|+. +..+ +.+.++
T Consensus 177 v~nta~v~~G~tvaV~GlG-gVGlaaI~gA~~agA~~IiAvD~~~~---Kl~~A~~fGAT~~vn~~~~~~vv~~i~~~T~ 252 (366)
T COG1062 177 VVNTAKVEPGDTVAVFGLG-GVGLAAIQGAKAAGAGRIIAVDINPE---KLELAKKFGATHFVNPKEVDDVVEAIVELTD 252 (366)
T ss_pred hhhcccCCCCCeEEEEecc-HhHHHHHHHHHHcCCceEEEEeCCHH---HHHHHHhcCCceeecchhhhhHHHHHHHhcC
Confidence 3467889999999999999 99999999999999976666655543 89999999999999864 4666 888886
Q ss_pred CCCCeEEEecCCCchHHH-HHHhcccCcEEEEEeccCCC-CcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHH
Q psy2961 78 IPKPKLALNCVGGNSATN-LLRTLVSKGVMVTYGGMSRE-PVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNE 155 (202)
Q Consensus 78 ~~~~d~vid~~g~~~~~~-~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 155 (202)
+ ++|++|||+|+....+ ++.++.++|+.+.+|..... ..++++..+... .++.|+....-.. +.++.+
T Consensus 253 g-G~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~~~p--------~~diP~ 322 (366)
T COG1062 253 G-GADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGGARP--------RSDIPR 322 (366)
T ss_pred C-CCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEEeecCCcc--------ccchhH
Confidence 4 9999999999987665 88999999999999954433 223455556555 8899988765332 556999
Q ss_pred HHHHHHcCCCCCC--cceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 156 LTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 156 ~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
+++++.+|+|... ++++++||+++|||+.+. +++.. |-||.|
T Consensus 323 lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~--~G~~I-R~Vi~~ 366 (366)
T COG1062 323 LVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMH--EGKSI-RSVIRF 366 (366)
T ss_pred HHHHHHcCCCchhHHhhccccHHHHHHHHHHHh--CCcee-eEEecC
Confidence 9999999999864 889999999999999999 77754 666543
No 25
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=99.92 E-value=2.9e-23 Score=160.38 Aligned_cols=168 Identities=15% Similarity=0.119 Sum_probs=134.9
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEE
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLA 84 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~v 84 (202)
.+++++|++|||+|+ |++|++++|+|+..|+++++++++++ +++.++++|+++++++.+. ...++|++
T Consensus 160 ~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~----~~~~a~~~Ga~~vi~~~~~-------~~~~~d~~ 227 (329)
T TIGR02822 160 RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAA----ARRLALALGAASAGGAYDT-------PPEPLDAA 227 (329)
T ss_pred hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChH----HHHHHHHhCCceecccccc-------CcccceEE
Confidence 467899999999998 59999999999999999888887765 6899999999999874321 11468988
Q ss_pred EecCCCchH-HHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHcC
Q psy2961 85 LNCVGGNSA-TNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTG 163 (202)
Q Consensus 85 id~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 163 (202)
+++.+.... ...+++++++|+++.+|...+....++...++.+++++.+++... .+.+.++++++.+|
T Consensus 228 i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~-----------~~~~~~~~~l~~~g 296 (329)
T TIGR02822 228 ILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNT-----------RADAREFLELAAQH 296 (329)
T ss_pred EECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCC-----------HHHHHHHHHHHHhC
Confidence 887765544 458999999999999996444333455556677888888876432 34477888999999
Q ss_pred CCCCCcceeechhhHHHHHHHHhhhcCCCCceEEE
Q psy2961 164 KLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 198 (202)
Q Consensus 164 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~ 198 (202)
++++ ++++|+|+++++||+.+. +++..||+||
T Consensus 297 ~i~~-i~~~~~l~~~~~A~~~~~--~~~~~Gkvvl 328 (329)
T TIGR02822 297 GVRV-TTHTYPLSEADRALRDLK--AGRFDGAAVL 328 (329)
T ss_pred CCee-EEEEEeHHHHHHHHHHHH--cCCCceEEEe
Confidence 9975 578999999999999999 8888999987
No 26
>KOG1202|consensus
Probab=99.92 E-value=6.3e-24 Score=176.91 Aligned_cols=193 Identities=15% Similarity=0.203 Sum_probs=161.7
Q ss_pred CcccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHH----hcCCceEeCh--hHHHh-HH
Q psy2961 1 MLKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK----SLGADYVFTE--EELRN-IS 73 (202)
Q Consensus 1 ~l~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~----~lg~~~v~~~--~~~~~-~~ 73 (202)
||+.+++.++|+++||++++|++|+++|.+|..+|+.|++++++.+ +++++. +|..+.+-|. .+++. +.
T Consensus 1543 ALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaE----KRefL~~rFPqLqe~~~~NSRdtsFEq~vl 1618 (2376)
T KOG1202|consen 1543 ALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAE----KREFLLKRFPQLQETNFANSRDTSFEQHVL 1618 (2376)
T ss_pred hhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHH----HHHHHHHhchhhhhhcccccccccHHHHHH
Confidence 4778899999999999999999999999999999999999999987 566664 3556666664 45777 99
Q ss_pred HhhCCCCCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHH
Q psy2961 74 RDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMM 153 (202)
Q Consensus 74 ~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 153 (202)
+.|.|.|+|+|+++...+.++..++||+-.||+..+|-..-.+.+.-....+.++.+++|..+.++..... ++..+..
T Consensus 1619 ~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~--e~~~ev~ 1696 (2376)
T KOG1202|consen 1619 WHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEE--EMWREVA 1696 (2376)
T ss_pred HHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcH--HHHHHHH
Confidence 99999999999999999999999999999999999995443333333345678999999999998876543 4455555
Q ss_pred HHHHHHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEeec
Q psy2961 154 NELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 201 (202)
Q Consensus 154 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~~ 201 (202)
.-+.+-+++|.++|..+++|+-.++++||+.|. +++..||+|+++.
T Consensus 1697 ~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMa--sGKHIGKVvikvr 1742 (2376)
T KOG1202|consen 1697 ALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMA--SGKHIGKVVIKVR 1742 (2376)
T ss_pred HHHHhhhccCceeccccccccHHHHHHHHHHHh--ccCccceEEEEEc
Confidence 566666777888999999999999999999999 9999999999985
No 27
>PLN02740 Alcohol dehydrogenase-like
Probab=99.91 E-value=5.6e-23 Score=161.81 Aligned_cols=180 Identities=17% Similarity=0.219 Sum_probs=138.6
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHhcCCceEeChh----HHHh-HHHhh
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEE----ELRN-ISRDA 76 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~----~~~~-~~~~~ 76 (202)
.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.++++ +++.++++|++.++++. ++.+ +.+.+
T Consensus 191 ~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~----r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~ 265 (381)
T PLN02740 191 WNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPE----KFEKGKEMGITDFINPKDSDKPVHERIREMT 265 (381)
T ss_pred HhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChH----HHHHHHHcCCcEEEecccccchHHHHHHHHh
Confidence 34578899999999997 4999999999999999 4777766654 78999999999988753 3556 77776
Q ss_pred CCCCCeEEEecCCCchH-HHHHHhcccC-cEEEEEeccCCC-CcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHH
Q psy2961 77 SIPKPKLALNCVGGNSA-TNLLRTLVSK-GVMVTYGGMSRE-PVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMM 153 (202)
Q Consensus 77 ~~~~~d~vid~~g~~~~-~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 153 (202)
.+ ++|++||++|++.. ...+.+++++ |+++.+|..... ...++...+ .+++++.|+....|.. ...+
T Consensus 266 ~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~--------~~~~ 335 (381)
T PLN02740 266 GG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMEL-FDGRSITGSVFGDFKG--------KSQL 335 (381)
T ss_pred CC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHH-hcCCeEEEEecCCCCc--------HHHH
Confidence 65 89999999998654 4588999996 999999965432 112222223 4678898887654321 2348
Q ss_pred HHHHHHHHcCCCCC--CcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 154 NELTEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 154 ~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
.++++++.+|++++ .++++|+++++++||+.+. +++. .|++|+.
T Consensus 336 ~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~--~~~~-~k~~~~~ 381 (381)
T PLN02740 336 PNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLE--DGKA-LRCLLHL 381 (381)
T ss_pred HHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHH--CCCc-eeEEEeC
Confidence 88999999999876 4789999999999999998 6654 5999863
No 28
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=99.91 E-value=6.5e-23 Score=162.82 Aligned_cols=180 Identities=16% Similarity=0.118 Sum_probs=141.3
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC---cEEEEecCcccHHHHHHHHHhc--------CCc-eEeCh---hH
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGL---KTINIVRNRDDIDKLKSYLKSL--------GAD-YVFTE---EE 68 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~---~vi~~~~~~~~~~~~~~~~~~l--------g~~-~v~~~---~~ 68 (202)
+++++++|++|+|+|++|++|++++|+|+..|+ +|+++..+++ +++.++++ |++ .++++ .+
T Consensus 169 ~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~----r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~ 244 (410)
T cd08238 169 HRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDE----RLARAQRLFPPEAASRGIELLYVNPATIDD 244 (410)
T ss_pred hhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHH----HHHHHHHhccccccccCceEEEECCCcccc
Confidence 457889999999999888999999999999864 6777766665 67888886 665 45664 35
Q ss_pred HHh-HHHhhCCCCCeEEEecCCCchH-HHHHHhcccCcEEEEEeccCCC--CcCCCcccccccCeeEEEEechhHhhhcc
Q psy2961 69 LRN-ISRDASIPKPKLALNCVGGNSA-TNLLRTLVSKGVMVTYGGMSRE--PVQIPTSAFIFKDITLRGHWMTRWQKENK 144 (202)
Q Consensus 69 ~~~-~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 144 (202)
+.+ +++.+++.++|++||++|.+.. ...+++++++|+++.++..... ..+++...++.+++++.|+....
T Consensus 245 ~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~------ 318 (410)
T cd08238 245 LHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN------ 318 (410)
T ss_pred HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCCC------
Confidence 666 7777877789999999986554 4589999999998877543221 23556667788999999976432
Q ss_pred cHHHHHHHHHHHHHHHHcCCCCC--CcceeechhhHHHHHHHHhhhcCCCCceEEEeec
Q psy2961 145 ESAERKSMMNELTEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 201 (202)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~~ 201 (202)
.+.++++++++.+|++++ .++++|+++++++||+.+. .+ ..||+|+.++
T Consensus 319 -----~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~--~~-~~gKvvl~~~ 369 (410)
T cd08238 319 -----TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP--GI-PGGKKLIYTQ 369 (410)
T ss_pred -----HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh--cc-CCceEEEECC
Confidence 345888999999999998 4789999999999999997 43 5689999864
No 29
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.91 E-value=1.7e-22 Score=156.84 Aligned_cols=192 Identities=55% Similarity=0.883 Sum_probs=153.6
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh-----HHHh-HHHhhC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE-----ELRN-ISRDAS 77 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~-----~~~~-~~~~~~ 77 (202)
..+++++|++|||+|++|++|++++|+|+..|++++++++++++.+++.+.++++|+++++++. ++.. +.....
T Consensus 140 ~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~ 219 (341)
T cd08290 140 DFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPG 219 (341)
T ss_pred hhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcC
Confidence 4467889999999999889999999999999999999998764333467888889999988754 4445 666665
Q ss_pred CCCCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhh-hcccHHHHHHHHHHH
Q psy2961 78 IPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQK-ENKESAERKSMMNEL 156 (202)
Q Consensus 78 ~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~ 156 (202)
+ ++|++|||+|+......+++++++|+++.+|........++...++.++.++.+.....+.. .. +......+.++
T Consensus 220 ~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 296 (341)
T cd08290 220 G-RPKLALNCVGGKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRAN--PEEKEDMLEEL 296 (341)
T ss_pred C-CceEEEECcCcHhHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcC--HHHHHHHHHHH
Confidence 5 89999999999887788999999999999985543333444445678899999988765543 22 14456679999
Q ss_pred HHHHHcCCCCCCcceee---chhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 157 TEMMRTGKLAAPAHKFV---TLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 157 ~~~~~~g~~~~~~~~~~---~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
++++.+|.+.+....++ +++++++|++.+. .+...+|+|++.
T Consensus 297 ~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~k~v~~~ 341 (341)
T cd08290 297 AELIREGKLKAPPVEKVTDDPLEEFKDALANAL--KGGGGGKQVLVM 341 (341)
T ss_pred HHHHHcCCccCCcccccccCCHHHHHHHHHHHh--hcCCCCeEEEeC
Confidence 99999999998766677 9999999999998 788889999863
No 30
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=99.91 E-value=9.1e-23 Score=159.34 Aligned_cols=176 Identities=16% Similarity=0.221 Sum_probs=138.3
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEE
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLA 84 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~v 84 (202)
....++|++|+|+|+ |++|++++|+|+..|++++++++++++ +...++++|++.++++.+...+.+.+ .++|++
T Consensus 175 ~~~~~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~~~~~~---~~~~~~~~Ga~~~i~~~~~~~~~~~~--~~~D~v 248 (357)
T PLN02514 175 FGLKQSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSDKK---REEALEHLGADDYLVSSDAAEMQEAA--DSLDYI 248 (357)
T ss_pred cccCCCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEeCCHHH---HHHHHHhcCCcEEecCCChHHHHHhc--CCCcEE
Confidence 344579999999976 599999999999999998888877652 33445679998877654322244443 369999
Q ss_pred EecCCCch-HHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHcC
Q psy2961 85 LNCVGGNS-ATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTG 163 (202)
Q Consensus 85 id~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 163 (202)
|||+|... ....+++++++|+++.+|... ....++...++.+++++.|++... ...+.++++++.+|
T Consensus 249 id~~g~~~~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~~~~~~i~g~~~~~-----------~~~~~~~~~~~~~g 316 (357)
T PLN02514 249 IDTVPVFHPLEPYLSLLKLDGKLILMGVIN-TPLQFVTPMLMLGRKVITGSFIGS-----------MKETEEMLEFCKEK 316 (357)
T ss_pred EECCCchHHHHHHHHHhccCCEEEEECCCC-CCCcccHHHHhhCCcEEEEEecCC-----------HHHHHHHHHHHHhC
Confidence 99999754 456899999999999999654 234566666778899999987543 23588899999999
Q ss_pred CCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEeec
Q psy2961 164 KLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 201 (202)
Q Consensus 164 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~~ 201 (202)
++++.+ ++|+++++++||+.+. +++..+|+++.++
T Consensus 317 ~l~~~i-~~~~l~~~~~A~~~~~--~~~~~gk~v~~~~ 351 (357)
T PLN02514 317 GLTSMI-EVVKMDYVNTAFERLE--KNDVRYRFVVDVA 351 (357)
T ss_pred CCcCcE-EEEcHHHHHHHHHHHH--cCCCceeEEEEcc
Confidence 998765 6899999999999999 8888899999875
No 31
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.91 E-value=1.6e-22 Score=155.76 Aligned_cols=190 Identities=40% Similarity=0.661 Sum_probs=154.5
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIP 79 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~ 79 (202)
.+.+.+.+|++|+|+|+++++|++++++|+.+|+++++++++++ +.+.++++|++.++++. ++.. +.+.+.+.
T Consensus 131 ~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 206 (323)
T cd05282 131 TEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDE----QVEELKALGADEVIDSSPEDLAQRVKEATGGA 206 (323)
T ss_pred HHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChH----HHHHHHhcCCCEEecccchhHHHHHHHHhcCC
Confidence 34566789999999999889999999999999999999888876 57888899999888754 4555 77777778
Q ss_pred CCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHH
Q psy2961 80 KPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEM 159 (202)
Q Consensus 80 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (202)
++|+++||+|+......+++++++|+++.+|........++...+..++.++.++....+.... .+....+.+.+++++
T Consensus 207 ~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 285 (323)
T cd05282 207 GARLALDAVGGESATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSA-TKEAKQETFAEVIKL 285 (323)
T ss_pred CceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccC-CHHHHHHHHHHHHHH
Confidence 8999999999988777899999999999998654432344444444589999998877654320 125667889999999
Q ss_pred HHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 160 MRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 160 ~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
+.++.+.+.+.+.|+++++++||+.+. .+...+|+|++
T Consensus 286 l~~~~l~~~~~~~~~~~~~~~a~~~~~--~~~~~~kvv~~ 323 (323)
T cd05282 286 VEAGVLTTPVGAKFPLEDFEEAVAAAE--QPGRGGKVLLT 323 (323)
T ss_pred HhCCCcccCccceecHHHHHHHHHHHh--cCCCCceEeeC
Confidence 999999887788999999999999998 77778899874
No 32
>KOG0023|consensus
Probab=99.91 E-value=1.5e-22 Score=149.03 Aligned_cols=173 Identities=22% Similarity=0.366 Sum_probs=143.8
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeCh---hHHHh-HHHhhCCCC
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTE---EELRN-ISRDASIPK 80 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~---~~~~~-~~~~~~~~~ 80 (202)
+.++.||++|.|.|++| +|.+++|+|+++|.+|+++.+++.+ +.+.++.||++..++. .|..+ +...+
T Consensus 176 ~~g~~pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~k---keea~~~LGAd~fv~~~~d~d~~~~~~~~~---- 247 (360)
T KOG0023|consen 176 RSGLGPGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKK---KEEAIKSLGADVFVDSTEDPDIMKAIMKTT---- 247 (360)
T ss_pred HcCCCCCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchh---HHHHHHhcCcceeEEecCCHHHHHHHHHhh----
Confidence 45778999999999995 9999999999999999999988754 6778889999988863 34444 55544
Q ss_pred CeEEEecCC--CchH-HHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHH
Q psy2961 81 PKLALNCVG--GNSA-TNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELT 157 (202)
Q Consensus 81 ~d~vid~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 157 (202)
|.++|++. .... ..++.+|+++|++|++|.+.. +..++...+..+.+++.|+...+ ..+.++++
T Consensus 248 -dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~-~~~~~~~~lil~~~~I~GS~vG~-----------~ket~E~L 314 (360)
T KOG0023|consen 248 -DGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEK-PLKLDTFPLILGRKSIKGSIVGS-----------RKETQEAL 314 (360)
T ss_pred -cCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCC-cccccchhhhcccEEEEeecccc-----------HHHHHHHH
Confidence 44455544 4444 458999999999999995554 77888889999999999999775 55689999
Q ss_pred HHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEeec
Q psy2961 158 EMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 201 (202)
Q Consensus 158 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~~ 201 (202)
++..++.+++++ ...+++++++||++|. +++..+|.|+++.
T Consensus 315 df~a~~~ik~~I-E~v~~~~v~~a~erm~--kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 315 DFVARGLIKSPI-ELVKLSEVNEAYERME--KGDVRYRFVVDVS 355 (360)
T ss_pred HHHHcCCCcCce-EEEehhHHHHHHHHHH--hcCeeEEEEEEcc
Confidence 999999999874 8899999999999999 9999999999874
No 33
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=99.91 E-value=1.6e-22 Score=158.58 Aligned_cols=180 Identities=19% Similarity=0.231 Sum_probs=135.1
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHhcCCceEeChh----HHHh-HHHhh
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEE----ELRN-ISRDA 76 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~----~~~~-~~~~~ 76 (202)
.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++..+++ +++.++++|++.++++. ++.+ +.+.+
T Consensus 178 ~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~----~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~ 252 (368)
T TIGR02818 178 LNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPA----KFELAKKLGATDCVNPNDYDKPIQEVIVEIT 252 (368)
T ss_pred HHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHH----HHHHHHHhCCCeEEcccccchhHHHHHHHHh
Confidence 35678899999999987 5999999999999999 6777766654 68899999999988753 3455 77776
Q ss_pred CCCCCeEEEecCCCchH-HHHHHhcccC-cEEEEEeccCC-CCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHH
Q psy2961 77 SIPKPKLALNCVGGNSA-TNLLRTLVSK-GVMVTYGGMSR-EPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMM 153 (202)
Q Consensus 77 ~~~~~d~vid~~g~~~~-~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 153 (202)
.+ ++|++|||+|++.. ...+++++++ |+++.+|.... ....+....++. +..+.++....+. ....+
T Consensus 253 ~~-g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~--------~~~~~ 322 (368)
T TIGR02818 253 DG-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT-GRVWRGSAFGGVK--------GRTEL 322 (368)
T ss_pred CC-CCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc-cceEEEeeccCCC--------cHHHH
Confidence 64 89999999997654 4589999886 99999996532 222233333332 3446665432211 13458
Q ss_pred HHHHHHHHcCCCCC--CcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 154 NELTEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 154 ~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
.++++++.+|++++ .++++|+++++++||+.+. +++. .|++|.|
T Consensus 323 ~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~--~~~~-~k~~v~~ 368 (368)
T TIGR02818 323 PGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMH--EGKS-IRTVIHY 368 (368)
T ss_pred HHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHh--CCCc-eeEEeeC
Confidence 88999999999864 4789999999999999998 6654 6999875
No 34
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=99.91 E-value=1.9e-22 Score=158.20 Aligned_cols=179 Identities=21% Similarity=0.285 Sum_probs=135.4
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHhcCCceEeChh----HHHh-HHHhh
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEE----ELRN-ISRDA 76 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~----~~~~-~~~~~ 76 (202)
.+.+++++|++|||+|+ |++|++++|+|+.+|+ +++++.++++ +++.++++|++.++++. ++.+ +.+.+
T Consensus 179 ~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~----~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~ 253 (368)
T cd08300 179 LNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPD----KFELAKKFGATDCVNPKDHDKPIQQVLVEMT 253 (368)
T ss_pred HHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHH----HHHHHHHcCCCEEEcccccchHHHHHHHHHh
Confidence 34577899999999986 5999999999999999 5777776665 68888999999999753 3556 77777
Q ss_pred CCCCCeEEEecCCCc-hHHHHHHhcccC-cEEEEEeccCC-CCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHH
Q psy2961 77 SIPKPKLALNCVGGN-SATNLLRTLVSK-GVMVTYGGMSR-EPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMM 153 (202)
Q Consensus 77 ~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 153 (202)
++ ++|++||++|++ ....++++++++ |+++.+|.... .....+...+. ++..+.++....|.. .+.+
T Consensus 254 ~~-g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~--------~~~~ 323 (368)
T cd08300 254 DG-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAFGGWKS--------RSQV 323 (368)
T ss_pred CC-CCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEecccCc--------HHHH
Confidence 65 899999999986 445689999886 99999996532 22222222222 334566655443321 3457
Q ss_pred HHHHHHHHcCCCCCC--cceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 154 NELTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 154 ~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
.++++++.+|++++. ++++|+|+++++||+.+. +++. .|++++
T Consensus 324 ~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~--~~~~-~k~~~~ 368 (368)
T cd08300 324 PKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMH--AGKS-IRTVVK 368 (368)
T ss_pred HHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHh--CCCC-ceeeeC
Confidence 889999999999863 789999999999999998 6654 598874
No 35
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=99.90 E-value=3.2e-22 Score=157.02 Aligned_cols=179 Identities=17% Similarity=0.232 Sum_probs=138.7
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHhcCCceEeChh----HHHh-HHHhh
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEE----ELRN-ISRDA 76 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~----~~~~-~~~~~ 76 (202)
.+.+++++|++|+|+|+ |++|++++|+|+..|+ +++++.++++ +.+.++++|++.++++. ++.. +++.+
T Consensus 180 ~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~----~~~~~~~~Ga~~~i~~~~~~~~~~~~v~~~~ 254 (369)
T cd08301 180 WNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPS----KFEQAKKFGVTEFVNPKDHDKPVQEVIAEMT 254 (369)
T ss_pred HhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHH----HHHHHHHcCCceEEcccccchhHHHHHHHHh
Confidence 34577899999999987 5999999999999999 6887777765 68899999999888753 3445 66666
Q ss_pred CCCCCeEEEecCCCchH-HHHHHhcccC-cEEEEEeccCCC-CcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHH
Q psy2961 77 SIPKPKLALNCVGGNSA-TNLLRTLVSK-GVMVTYGGMSRE-PVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMM 153 (202)
Q Consensus 77 ~~~~~d~vid~~g~~~~-~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 153 (202)
.+ ++|++|||+|+... ...+++++++ |+++.+|..... ...++...+ .+++++.|++...|.. ...+
T Consensus 255 ~~-~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~--------~~~~ 324 (369)
T cd08301 255 GG-GVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNL-LNGRTLKGTLFGGYKP--------KTDL 324 (369)
T ss_pred CC-CCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHH-hcCCeEEEEecCCCCh--------HHHH
Confidence 54 89999999998754 4588999996 999999965432 223333333 3688999987654421 3458
Q ss_pred HHHHHHHHcCCCCCC--cceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 154 NELTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 154 ~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
+++++++.+|.+++. ++++|+++++++||+.+. +++. .|++|.
T Consensus 325 ~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~--~~~~-~k~~~~ 369 (369)
T cd08301 325 PNLVEKYMKKELELEKFITHELPFSEINKAFDLLL--KGEC-LRCILH 369 (369)
T ss_pred HHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHH--CCCc-eeEEeC
Confidence 889999999988763 689999999999999998 7775 488873
No 36
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.90 E-value=6.7e-22 Score=152.41 Aligned_cols=186 Identities=19% Similarity=0.232 Sum_probs=151.3
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPK 80 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~~ 80 (202)
+.++++++++|+|+|+++++|++++++|+..|+++++++++++ +.+.++++|++.++++. ++.. +.+.+.+.+
T Consensus 136 ~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 211 (324)
T cd08244 136 DLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPA----KTALVRALGADVAVDYTRPDWPDQVREALGGGG 211 (324)
T ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHcCCCEEEecCCccHHHHHHHHcCCCC
Confidence 4567889999999999889999999999999999999887765 57788889998888643 4445 666666678
Q ss_pred CeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHH
Q psy2961 81 PKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMM 160 (202)
Q Consensus 81 ~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (202)
+|+++|++|+......+++++++|+++.+|........++....+.+++++.++....+.. ....+.+.++++++
T Consensus 212 ~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l 286 (324)
T cd08244 212 VTVVLDGVGGAIGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAER-----GGLRALEARALAEA 286 (324)
T ss_pred ceEEEECCChHhHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCH-----HHHHHHHHHHHHHH
Confidence 9999999999887779999999999999986554333444445568888888877543221 34567889999999
Q ss_pred HcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 161 RTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 161 ~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
.++.+.+.+...|+++++++||+.+. ++...+|+++++
T Consensus 287 ~~~~l~~~~~~~~~~~~~~~a~~~~~--~~~~~~kvv~~~ 324 (324)
T cd08244 287 AAGRLVPVVGQTFPLERAAEAHAALE--ARSTVGKVLLLP 324 (324)
T ss_pred HCCCccCccceEEeHHHHHHHHHHHH--cCCCCceEEEeC
Confidence 99999877778999999999999998 888889999864
No 37
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=99.90 E-value=3.8e-22 Score=156.35 Aligned_cols=179 Identities=18% Similarity=0.242 Sum_probs=137.6
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHhcCCceEeChh----HHHh-HHHhh
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEE----ELRN-ISRDA 76 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~----~~~~-~~~~~ 76 (202)
.+.+++++|++|+|+|+ |++|++++|+|+.+|+ +|+++.++++ +++.++++|++.++++. ++.+ +.+.+
T Consensus 177 ~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~----~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~ 251 (365)
T cd08277 177 WNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINED----KFEKAKEFGATDFINPKDSDKPVSEVIREMT 251 (365)
T ss_pred HhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHH----HHHHHHHcCCCcEeccccccchHHHHHHHHh
Confidence 35577899999999986 5999999999999999 5777766654 68888999999988753 2355 66666
Q ss_pred CCCCCeEEEecCCCchH-HHHHHhcccC-cEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHH
Q psy2961 77 SIPKPKLALNCVGGNSA-TNLLRTLVSK-GVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMN 154 (202)
Q Consensus 77 ~~~~~d~vid~~g~~~~-~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 154 (202)
. .++|++|||+|+... ...+++++++ |+++.+|...+...+++...++. ++++.|++...|.. ...+.
T Consensus 252 ~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~--------~~~~~ 321 (365)
T cd08277 252 G-GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFGGFKS--------RSDVP 321 (365)
T ss_pred C-CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecCCCCh--------HHHHH
Confidence 6 689999999997554 5589999885 99999996543333444444543 78888877654421 33578
Q ss_pred HHHHHHHcCCCC--CCcceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 155 ELTEMMRTGKLA--APAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 155 ~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
++++++.++.+. +.++++|+++++++||+.+. +++ ..|+++.
T Consensus 322 ~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~--~~~-~~k~~i~ 365 (365)
T cd08277 322 KLVSKYMNKKFDLDELITHVLPFEEINKGFDLMK--SGE-CIRTVIT 365 (365)
T ss_pred HHHHHHHCCCcChhHheeeEEchhhHHHHHHHHH--CCC-CceEeeC
Confidence 899999998766 45789999999999999988 666 4688873
No 38
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=99.90 E-value=2.8e-22 Score=156.36 Aligned_cols=177 Identities=18% Similarity=0.319 Sum_probs=141.9
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIP 79 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~ 79 (202)
..+++++|++|+|+|+ |++|++++|+|+..|+ +++++.++++ +.+.++++|++.++++. ++.+ +.+.+.+.
T Consensus 166 ~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~----~~~~~~~~ga~~~i~~~~~~~~~~l~~~~~~~ 240 (351)
T cd08233 166 RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEA----RRELAEELGATIVLDPTEVDVVAEVRKLTGGG 240 (351)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH----HHHHHHHhCCCEEECCCccCHHHHHHHHhCCC
Confidence 4567889999999986 5999999999999999 6666665554 67888889999998753 4556 77777767
Q ss_pred CCeEEEecCCCc-hHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHH
Q psy2961 80 KPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTE 158 (202)
Q Consensus 80 ~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (202)
++|++||++|+. .+...+++++++|+++.+|... ....++...++.+++++.+.+... .+.++++++
T Consensus 241 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~-----------~~~~~~~~~ 308 (351)
T cd08233 241 GVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWE-KPISFNPNDLVLKEKTLTGSICYT-----------REDFEEVID 308 (351)
T ss_pred CCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCC-CCCccCHHHHHhhCcEEEEEeccC-----------cchHHHHHH
Confidence 799999999865 4556899999999999999654 344566666778899999876431 345889999
Q ss_pred HHHcCCCCC--CcceeechhhH-HHHHHHHhhhcCCC-CceEEEe
Q psy2961 159 MMRTGKLAA--PAHKFVTLKNF-QEALMNTMSIQGKS-GVKYYID 199 (202)
Q Consensus 159 ~~~~g~~~~--~~~~~~~~~~~-~~a~~~~~~~~~~~-~gkvv~~ 199 (202)
++++|++++ .++++|+++++ ++||+.+. +++. .+|+||.
T Consensus 309 ~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~--~~~~~~~k~v~~ 351 (351)
T cd08233 309 LLASGKIDAEPLITSRIPLEDIVEKGFEELI--NDKEQHVKILVS 351 (351)
T ss_pred HHHcCCCChHHheEEEecHHHHHHHHHHHHH--hCCCCceEEEeC
Confidence 999999965 46789999996 79999998 6665 4899973
No 39
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=99.90 E-value=5.7e-22 Score=156.79 Aligned_cols=176 Identities=18% Similarity=0.256 Sum_probs=142.8
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh------------------
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE------------------ 67 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~------------------ 67 (202)
+++++|++|+|+|++|++|++++++|+.+|+++++++++++ +.+.++++|++.++++.
T Consensus 189 ~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~----~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~ 264 (393)
T cd08246 189 NTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEE----KAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTA 264 (393)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHH----HHHHHHHcCCCEEEcccccccccccccccchhhhh
Confidence 67899999999999889999999999999999988877665 68888999998888641
Q ss_pred ------HHHh-HHHhhCCC-CCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhH
Q psy2961 68 ------ELRN-ISRDASIP-KPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRW 139 (202)
Q Consensus 68 ------~~~~-~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 139 (202)
.+.. +.+.+.+. ++|++||++|+......+++++++|+++.+|........++...++.++.++.+.+...
T Consensus 265 ~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~~~~~~i~g~~~~~- 343 (393)
T cd08246 265 WTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLWMRQKRIQGSHFAN- 343 (393)
T ss_pred hhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCCCcHHHHhhheeEEEecccCc-
Confidence 1344 66677766 89999999998777779999999999999986544333445555667787887765432
Q ss_pred hhhcccHHHHHHHHHHHHHHHHcCCCCCCcceeechhhHHHHHHHHhhhcC-CCCceEEE
Q psy2961 140 QKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQG-KSGVKYYI 198 (202)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~gkvv~ 198 (202)
.+.+..++++++++.+.+.++++|+++++++||+.+. ++ +..||+++
T Consensus 344 ----------~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~--~~~~~~gkvvv 391 (393)
T cd08246 344 ----------DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMH--RNQHHVGNMAV 391 (393)
T ss_pred ----------HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHH--hCccccceEEE
Confidence 2357788999999999877788999999999999998 77 67889886
No 40
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=99.89 E-value=1.1e-21 Score=152.42 Aligned_cols=177 Identities=22% Similarity=0.309 Sum_probs=140.5
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHh-cCCceEeCh-h-HHHh-HHHhhCCCCCeE
Q psy2961 8 LSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADYVFTE-E-ELRN-ISRDASIPKPKL 83 (202)
Q Consensus 8 ~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~-lg~~~v~~~-~-~~~~-~~~~~~~~~~d~ 83 (202)
.+++++|+|.|+| ++|++++++++..|+..+++++..+ +|++.+++ .|++.+++. . +... +.+.+.+.++|+
T Consensus 166 ~~~~~~V~V~GaG-pIGLla~~~a~~~Ga~~Viv~d~~~---~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~ 241 (350)
T COG1063 166 VRPGGTVVVVGAG-PIGLLAIALAKLLGASVVIVVDRSP---ERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADV 241 (350)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHHHHcCCceEEEeCCCH---HHHHHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCE
Confidence 4555699999999 9999999999999998777775554 38999988 666766654 2 3444 777888789999
Q ss_pred EEecCCCchHH-HHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHc
Q psy2961 84 ALNCVGGNSAT-NLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRT 162 (202)
Q Consensus 84 vid~~g~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (202)
+|||+|.+.+. .++++++++|+++.+|........++...++.+++++.|+... .....++.+++++.+
T Consensus 242 vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~----------~~~~~~~~~~~ll~~ 311 (350)
T COG1063 242 VIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRP----------SGREDFERALDLLAS 311 (350)
T ss_pred EEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCC----------CCcccHHHHHHHHHc
Confidence 99999977654 4899999999999999665443256677888999999998431 113459999999999
Q ss_pred CCCCCC--cceeechhhHHHHHHHHhhhcCC-CCceEEEee
Q psy2961 163 GKLAAP--AHKFVTLKNFQEALMNTMSIQGK-SGVKYYIDF 200 (202)
Q Consensus 163 g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~-~~gkvv~~~ 200 (202)
|++.+. +++.++++++++||+.+. ++. ...|+++.+
T Consensus 312 g~i~~~~lit~~~~~~~~~~a~~~~~--~~~~~~~Kv~i~~ 350 (350)
T COG1063 312 GKIDPEKLITHRLPLDDAAEAYELFA--DRKEEAIKVVLKP 350 (350)
T ss_pred CCCChhHceEeeccHHHHHHHHHHHH--hcCCCeEEEEecC
Confidence 999975 578999999999999998 533 366998864
No 41
>KOG1196|consensus
Probab=99.89 E-value=4e-22 Score=145.41 Aligned_cols=187 Identities=21% Similarity=0.286 Sum_probs=155.7
Q ss_pred cccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHH-hcCCceEeChh---HHHh-HHHhh
Q psy2961 2 LKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK-SLGADYVFTEE---ELRN-ISRDA 76 (202)
Q Consensus 2 l~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~-~lg~~~v~~~~---~~~~-~~~~~ 76 (202)
+++++.++.|++|+|.||+|++|+++.|+|+.+|++|++.+++++ +.+.++ ++|.+..+||+ ++.+ +++ +
T Consensus 145 f~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~E----Kv~ll~~~~G~d~afNYK~e~~~~~aL~r-~ 219 (343)
T KOG1196|consen 145 FYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKE----KVDLLKTKFGFDDAFNYKEESDLSAALKR-C 219 (343)
T ss_pred HHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChh----hhhhhHhccCCccceeccCccCHHHHHHH-h
Confidence 457788999999999999999999999999999999999999987 678885 57999999874 4555 555 4
Q ss_pred CCCCCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCc--CC---CcccccccCeeEEEEechhHhhhcccHHHHHH
Q psy2961 77 SIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPV--QI---PTSAFIFKDITLRGHWMTRWQKENKESAERKS 151 (202)
Q Consensus 77 ~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 151 (202)
...++|+.||.+|+......+..|+..||++.+|....-+. +. +....+.+.+.+.|+....+. ..+.+
T Consensus 220 ~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~------d~~~k 293 (343)
T KOG1196|consen 220 FPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYL------DKYPK 293 (343)
T ss_pred CCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechh------hhhHH
Confidence 45799999999999999999999999999999996653221 11 234567788999997766544 34577
Q ss_pred HHHHHHHHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEeec
Q psy2961 152 MMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 201 (202)
Q Consensus 152 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~~ 201 (202)
.++.+..++++|+|+..-+-.-.||+.++||.-+. .+...||.++.+.
T Consensus 294 ~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf--~GkNvGKqiv~va 341 (343)
T KOG1196|consen 294 FLDFLLPYIKEGKITYVEDIADGLENGPSALVGLF--HGKNVGKQLVKVA 341 (343)
T ss_pred HHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHh--ccCcccceEEEee
Confidence 89999999999999987666777999999999999 8999999999875
No 42
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=99.89 E-value=1.6e-21 Score=154.37 Aligned_cols=180 Identities=17% Similarity=0.248 Sum_probs=144.7
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhH----------------
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE---------------- 68 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~---------------- 68 (202)
.+++.+|++|+|+|++|++|++++|+|+..|+++++++++++ +.+.++++|++.++|+++
T Consensus 184 ~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~----~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~ 259 (398)
T TIGR01751 184 PATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPE----KAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPK 259 (398)
T ss_pred ccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHH----HHHHHHHcCCCEEecCCCcchhhccccccccccc
Confidence 467889999999999889999999999999999888876654 678888999998887532
Q ss_pred --------HHh-HHHhhCCCCCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhH
Q psy2961 69 --------LRN-ISRDASIPKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRW 139 (202)
Q Consensus 69 --------~~~-~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 139 (202)
+.. +.+.+.+.++|++|||+|+......+++++++|+++.+|........++...++.++.++.+.....
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 338 (398)
T TIGR01751 260 EWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHDYDNRYLWMRQKRIQGSHFAN- 338 (398)
T ss_pred hhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCCcCHHHHhhcccEEEccccCc-
Confidence 233 5556666789999999998766678999999999999996654434445555556677777765432
Q ss_pred hhhcccHHHHHHHHHHHHHHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEeec
Q psy2961 140 QKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 201 (202)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~~ 201 (202)
.+.++++++++.++++.+.+++++++++++++|+.+. ++...+|+|+.+.
T Consensus 339 ----------~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~--~~~~~gkvvv~~~ 388 (398)
T TIGR01751 339 ----------LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVH--RNHHQGNVAVLVL 388 (398)
T ss_pred ----------HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHH--cCCCCceEEEEeC
Confidence 2336788899999999987889999999999999998 8888899999875
No 43
>KOG0022|consensus
Probab=99.89 E-value=2.2e-21 Score=142.47 Aligned_cols=178 Identities=19% Similarity=0.210 Sum_probs=143.5
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcE-EEEecCcccHHHHHHHHHhcCCceEeChhH----HHh-HHHhhC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKT-INIVRNRDDIDKLKSYLKSLGADYVFTEEE----LRN-ISRDAS 77 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~v-i~~~~~~~~~~~~~~~~~~lg~~~v~~~~~----~~~-~~~~~~ 77 (202)
+.++++||++|.|+|.| ++|++++|-|+..||.. |++.-+++ +.+.++++|++.++|+.| ..+ +.+.|+
T Consensus 186 ~~Akv~~GstvAVfGLG-~VGLav~~Gaka~GAsrIIgvDiN~~----Kf~~ak~fGaTe~iNp~d~~~~i~evi~EmTd 260 (375)
T KOG0022|consen 186 NTAKVEPGSTVAVFGLG-GVGLAVAMGAKAAGASRIIGVDINPD----KFEKAKEFGATEFINPKDLKKPIQEVIIEMTD 260 (375)
T ss_pred hhcccCCCCEEEEEecc-hHHHHHHHhHHhcCcccEEEEecCHH----HHHHHHhcCcceecChhhccccHHHHHHHHhc
Confidence 56889999999999999 99999999999999955 55554544 799999999999999764 445 777787
Q ss_pred CCCCeEEEecCCCchHHH-HHHhcccC-cEEEEEeccCCC-CcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHH
Q psy2961 78 IPKPKLALNCVGGNSATN-LLRTLVSK-GVMVTYGGMSRE-PVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMN 154 (202)
Q Consensus 78 ~~~~d~vid~~g~~~~~~-~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 154 (202)
.|+|+-|||+|...... ++.+...| |+-|.+|..... ..++.+..+ ..+.++.|.....|.. +..+.
T Consensus 261 -gGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l-~~GR~~~Gs~FGG~K~--------~~~iP 330 (375)
T KOG0022|consen 261 -GGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQL-VTGRTWKGSAFGGFKS--------KSDIP 330 (375)
T ss_pred -CCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhh-ccccEEEEEecccccc--------hhhhh
Confidence 79999999999998765 77777777 999999954433 334445445 4577888888777654 55688
Q ss_pred HHHHHHHcCCCCCC--cceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 155 ELTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 155 ~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
.+++.+.++++... +++++|++++++||+.+. +++.. |.|+.
T Consensus 331 ~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~--~Gksi-R~vl~ 374 (375)
T KOG0022|consen 331 KLVKDYMKKKLNLDEFITHELPFEEINKAFDLLH--EGKSI-RCVLW 374 (375)
T ss_pred HHHHHHHhCccchhhhhhcccCHHHHHHHHHHHh--CCceE-EEEEe
Confidence 99999999988864 899999999999999999 77765 77765
No 44
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=99.89 E-value=9e-22 Score=153.71 Aligned_cols=175 Identities=20% Similarity=0.275 Sum_probs=128.4
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEe
Q psy2961 7 SLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALN 86 (202)
Q Consensus 7 ~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid 86 (202)
++++|++|+|+|+ |++|++++|+|+..|++++++.+++. .+++++.++++|++.+ ++.+. +..+.....++|+|||
T Consensus 169 ~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~-~~~~~~~~~~~Ga~~v-~~~~~-~~~~~~~~~~~d~vid 244 (355)
T cd08230 169 PTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDP-PDPKADIVEELGATYV-NSSKT-PVAEVKLVGEFDLIIE 244 (355)
T ss_pred ccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEe-cCCcc-chhhhhhcCCCCEEEE
Confidence 3678999999997 59999999999999999888876321 1237889999999875 43221 1111111357999999
Q ss_pred cCCCch-HHHHHHhcccCcEEEEEeccCC-CCcCCC----cccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHH
Q psy2961 87 CVGGNS-ATNLLRTLVSKGVMVTYGGMSR-EPVQIP----TSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMM 160 (202)
Q Consensus 87 ~~g~~~-~~~~~~~l~~~G~~v~~g~~~~-~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (202)
|+|++. +...+++++++|+++.+|.... ....++ ...++.+++++.|+.... .+.++++++++
T Consensus 245 ~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~-----------~~~~~~~~~~l 313 (355)
T cd08230 245 ATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNAN-----------KRHFEQAVEDL 313 (355)
T ss_pred CcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCc-----------hhhHHHHHHHH
Confidence 999865 4568999999999999996654 233344 245677899999976432 23466777777
Q ss_pred HcCC------CCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 161 RTGK------LAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 161 ~~g~------~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
.++. +++.++++|+++++++||+.+. ++. +|+||+|
T Consensus 314 ~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~--~~~--~K~v~~~ 355 (355)
T cd08230 314 AQWKYRWPGVLERLITRRVPLEEFAEALTEKP--DGE--IKVVIEW 355 (355)
T ss_pred HhcccccccchHHheeeeecHHHHHHHHHhcc--cCC--eEEEeeC
Confidence 7665 5556789999999999999876 544 5999975
No 45
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=99.89 E-value=2.2e-21 Score=153.06 Aligned_cols=179 Identities=17% Similarity=0.186 Sum_probs=130.6
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeCh--hHHHh-HHHhhCCCCC
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTE--EELRN-ISRDASIPKP 81 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~--~~~~~-~~~~~~~~~~ 81 (202)
++++++|++|+|.|++ ++|++++|+|+.+|++++++++..+ ++++.++++|++.+... .++.+ +.+.+.+.++
T Consensus 180 ~~~~~~g~~VlV~G~G-~iG~~aiqlAk~~Ga~~vi~~d~~~---~r~~~a~~~Ga~~v~~~~~~~~~~~v~~~~~~~g~ 255 (393)
T TIGR02819 180 TAGVGPGSTVYIAGAG-PVGLAAAASAQLLGAAVVIVGDLNP---ARLAQARSFGCETVDLSKDATLPEQIEQILGEPEV 255 (393)
T ss_pred hcCCCCCCEEEEECCC-HHHHHHHHHHHHcCCceEEEeCCCH---HHHHHHHHcCCeEEecCCcccHHHHHHHHcCCCCC
Confidence 3678999999997765 9999999999999998776654433 37899999999854432 24556 7777777789
Q ss_pred eEEEecCCCc---------------hHHHHHHhcccCcEEEEEeccCC-CCcCCC-----------cccccccCeeEEEE
Q psy2961 82 KLALNCVGGN---------------SATNLLRTLVSKGVMVTYGGMSR-EPVQIP-----------TSAFIFKDITLRGH 134 (202)
Q Consensus 82 d~vid~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~-----------~~~~~~~~~~~~g~ 134 (202)
|++||++|.+ .+..++++++++|+++.+|.... ....++ ....+.+++++.+.
T Consensus 256 Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~ 335 (393)
T TIGR02819 256 DCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTG 335 (393)
T ss_pred cEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccccccccccccchHHhhccCceEEec
Confidence 9999999986 35568999999999999997532 221111 22223344444442
Q ss_pred echhHhhhcccHHHHHHHHHHHHHHHHcCCCCCC--cc-eeechhhHHHHHHHHhhhcCCCCceEEEeec
Q psy2961 135 WMTRWQKENKESAERKSMMNELTEMMRTGKLAAP--AH-KFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 201 (202)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~-~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~~ 201 (202)
.. ...+.+.++++++.+|++++. ++ ++|+|+++++||+.+. +++ .+|+++.++
T Consensus 336 ~~-----------~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~--~~~-~~Kvvi~~~ 391 (393)
T TIGR02819 336 QT-----------PVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFD--AGA-AKKFVIDPH 391 (393)
T ss_pred cC-----------ChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHh--hCC-ceEEEEeCC
Confidence 11 112334678999999999863 55 7899999999999998 664 589999864
No 46
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.89 E-value=4.1e-21 Score=148.59 Aligned_cols=192 Identities=20% Similarity=0.248 Sum_probs=149.5
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--H-HHh-HHHhhCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--E-LRN-ISRDASI 78 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~-~~~-~~~~~~~ 78 (202)
.+.+.+++|++|+|+|+++++|++++++|+..|++++.++++++ +.+.++++|.+.++++. + +.. +...+.+
T Consensus 133 ~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 208 (334)
T PTZ00354 133 KKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEE----KVDFCKKLAAIILIRYPDEEGFAPKVKKLTGE 208 (334)
T ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHcCCcEEEecCChhHHHHHHHHHhCC
Confidence 34567889999999999889999999999999999888776665 67888889998888653 2 555 7777767
Q ss_pred CCCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcC-CCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHH
Q psy2961 79 PKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQ-IPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELT 157 (202)
Q Consensus 79 ~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 157 (202)
.++|+++|++++......+++++++|+++.++...+.... ++...++.+..++.++.......... +....+.++++.
T Consensus 209 ~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 287 (334)
T PTZ00354 209 KGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYK-ADLVASFEREVL 287 (334)
T ss_pred CCceEEEECCchHHHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhh-HHHHHHHHHHHH
Confidence 7899999999988777799999999999999855433322 45445556777888766443211111 133456678889
Q ss_pred HHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEeec
Q psy2961 158 EMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 201 (202)
Q Consensus 158 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~~ 201 (202)
+++.++.+.+.+.+.+++++++++++.+. .++..+|+|+.+.
T Consensus 288 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~kvvv~~~ 329 (334)
T PTZ00354 288 PYMEEGEIKPIVDRTYPLEEVAEAHTFLE--QNKNIGKVVLTVN 329 (334)
T ss_pred HHHHCCCccCccccEEcHHHHHHHHHHHH--hCCCCceEEEecC
Confidence 99999999887778999999999999998 7777889999874
No 47
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=99.89 E-value=1.9e-21 Score=149.00 Aligned_cols=163 Identities=17% Similarity=0.155 Sum_probs=124.8
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCV 88 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~ 88 (202)
.++++|+|+|+| ++|++++|+|+.+|++++++++..+. +++.+.+ ..++++.+. .+.++|++|||+
T Consensus 143 ~~~~~vlV~G~G-~vG~~a~q~ak~~G~~~v~~~~~~~~---rl~~a~~---~~~i~~~~~-------~~~g~Dvvid~~ 208 (308)
T TIGR01202 143 VKVLPDLIVGHG-TLGRLLARLTKAAGGSPPAVWETNPR---RRDGATG---YEVLDPEKD-------PRRDYRAIYDAS 208 (308)
T ss_pred cCCCcEEEECCC-HHHHHHHHHHHHcCCceEEEeCCCHH---HHHhhhh---ccccChhhc-------cCCCCCEEEECC
Confidence 468899999875 99999999999999997776655432 4444443 344554321 235799999999
Q ss_pred CCchH-HHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHcCCCCC
Q psy2961 89 GGNSA-TNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAA 167 (202)
Q Consensus 89 g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 167 (202)
|++.. ..++++++++|+++.+|... .+..++...++.+++++.++.... .+.++++++++++|++.+
T Consensus 209 G~~~~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~~l~~~g~i~~ 276 (308)
T TIGR01202 209 GDPSLIDTLVRRLAKGGEIVLAGFYT-EPVNFDFVPAFMKEARLRIAAEWQ-----------PGDLHAVRELIESGALSL 276 (308)
T ss_pred CCHHHHHHHHHhhhcCcEEEEEeecC-CCcccccchhhhcceEEEEecccc-----------hhHHHHHHHHHHcCCCCh
Confidence 99764 56899999999999999643 334566667778888888765321 355899999999999987
Q ss_pred --CcceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 168 --PAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 168 --~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
.++++||++++++||+.+. ++...+|++++
T Consensus 277 ~~~it~~~~l~~~~~A~~~~~--~~~~~~Kv~~~ 308 (308)
T TIGR01202 277 DGLITHQRPASDAAEAYMTAF--SDPDCLKMILD 308 (308)
T ss_pred hhccceeecHHHHHHHHHHHh--cCcCceEEEeC
Confidence 4789999999999999887 66667899874
No 48
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.88 E-value=4.6e-21 Score=149.33 Aligned_cols=178 Identities=22% Similarity=0.352 Sum_probs=141.6
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhH--HHhHHHhhCCCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRNISRDASIPKP 81 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~--~~~~~~~~~~~~~ 81 (202)
+.+++++|++|+|+|++|++|++++++|+.+|++++++++++ +++.++++|++.+++..+ ... ...+.+.++
T Consensus 171 ~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~ 244 (350)
T cd08274 171 ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-----KEEAVRALGADTVILRDAPLLAD-AKALGGEPV 244 (350)
T ss_pred hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-----hhHHHHhcCCeEEEeCCCccHHH-HHhhCCCCC
Confidence 456788999999999988999999999999999998887543 467888899876654322 222 233455789
Q ss_pred eEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHH
Q psy2961 82 KLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMR 161 (202)
Q Consensus 82 d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (202)
|++||++|++.....+++++++|+++.+|........++...++.+++++.++.... .+.+.++++++.
T Consensus 245 d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~ 313 (350)
T cd08274 245 DVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGT-----------REVFRRLVRYIE 313 (350)
T ss_pred cEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCC-----------HHHHHHHHHHHH
Confidence 999999998877779999999999999986533223455556678888888877431 456888999999
Q ss_pred cCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 162 TGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 162 ~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
++++.+.+.++++++++++||+.+. .+...+|+|+++
T Consensus 314 ~~~l~~~~~~~~~~~~~~~a~~~~~--~~~~~~kvvi~~ 350 (350)
T cd08274 314 EGEIRPVVAKTFPLSEIREAQAEFL--EKRHVGKLVLVP 350 (350)
T ss_pred CCCcccccccccCHHHHHHHHHHHh--cCCCceEEEEeC
Confidence 9999887789999999999999998 777788999853
No 49
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.88 E-value=1.5e-20 Score=144.05 Aligned_cols=188 Identities=19% Similarity=0.226 Sum_probs=148.6
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIP 79 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~ 79 (202)
++.+++.+|++|+|+|+.+++|++++++|+.+|+++++++++++ +.+.++++|++.+++.. ++.. +...+.+.
T Consensus 129 ~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 204 (320)
T cd05286 129 RETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEE----KAELARAAGADHVINYRDEDFVERVREITGGR 204 (320)
T ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHH----HHHHHHHCCCCEEEeCCchhHHHHHHHHcCCC
Confidence 45677889999999998889999999999999999999887665 57888889998888643 4555 77777667
Q ss_pred CCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHH
Q psy2961 80 KPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEM 159 (202)
Q Consensus 80 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (202)
++|+++||+++......+++++++|+++.+|........++...+..+++++.+.....+. . .+....+.+.++.++
T Consensus 205 ~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~ 281 (320)
T cd05286 205 GVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYI-A--TREELLARAAELFDA 281 (320)
T ss_pred CeeEEEECCCcHhHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhc-C--CHHHHHHHHHHHHHH
Confidence 8999999999877677899999999999998554332233333334778888766544332 1 224566778899999
Q ss_pred HHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 160 MRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 160 ~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
+.++.+.+.+.+.|+++++++||+.+. .+...+|++++
T Consensus 282 ~~~~~l~~~~~~~~~~~~~~~a~~~~~--~~~~~~~vv~~ 319 (320)
T cd05286 282 VASGKLKVEIGKRYPLADAAQAHRDLE--SRKTTGKLLLI 319 (320)
T ss_pred HHCCCCcCcccceEcHHHHHHHHHHHH--cCCCCceEEEe
Confidence 999999887778999999999999998 77778899875
No 50
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.88 E-value=1.8e-20 Score=144.57 Aligned_cols=179 Identities=22% Similarity=0.328 Sum_probs=138.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHh-HHHhhCCCCCeEEEecC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKLALNCV 88 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~d~vid~~ 88 (202)
.+++|+|+|++|++|++++|+|+..|+++++++++++ +++.++++|++.++++.+... ......+.++|+++||+
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 221 (325)
T cd05280 146 EDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEE----QADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTV 221 (325)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECC
Confidence 3579999999889999999999999999888887765 678889999999887655433 33444445799999999
Q ss_pred CCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHcCCCCCC
Q psy2961 89 GGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAP 168 (202)
Q Consensus 89 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 168 (202)
|++.....+++++++|+++.+|........++...++.+++++.+........ ....+.++.+.+++..+ +.+.
T Consensus 222 ~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~ 295 (325)
T cd05280 222 GGDVLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPM-----ELRKQVWQKLATEWKPD-LLEI 295 (325)
T ss_pred chHHHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCch-----hHHHHHHHHHHHHHhcC-Cccc
Confidence 99877789999999999999996543333444445557888888876543211 23346677777777777 4445
Q ss_pred cceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 169 AHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 169 ~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
+..+|+++++++|++.+. .++..||+|+++
T Consensus 296 ~~~~~~~~~~~~a~~~~~--~~~~~gk~vv~~ 325 (325)
T cd05280 296 VVREISLEELPEAIDRLL--AGKHRGRTVVKI 325 (325)
T ss_pred eeeEecHHHHHHHHHHHh--cCCcceEEEEeC
Confidence 778999999999999999 888889999863
No 51
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.87 E-value=1.8e-20 Score=144.45 Aligned_cols=182 Identities=24% Similarity=0.336 Sum_probs=141.0
Q ss_pred cCCCCCC-EEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHh-HHHhhCCCCCeE
Q psy2961 6 NSLSPGD-VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKL 83 (202)
Q Consensus 6 ~~~~~g~-~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~d~ 83 (202)
+.+.+|+ +|+|+|++|++|++++|+|+.+|+++++++++++ +.+.++++|++.+++..+... +..... .++|+
T Consensus 140 ~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~d~ 214 (323)
T TIGR02823 140 NGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAE----EEDYLKELGASEVIDREDLSPPGKPLEK-ERWAG 214 (323)
T ss_pred cCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHH----HHHHHHhcCCcEEEccccHHHHHHHhcC-CCceE
Confidence 3478898 9999999889999999999999999998887775 468888999988887654333 444443 35999
Q ss_pred EEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHcC
Q psy2961 84 ALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTG 163 (202)
Q Consensus 84 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 163 (202)
++||+|++.....+++++++|+++.+|........++...++.+++++.+........ ....+.+..+.+++..+
T Consensus 215 vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 289 (323)
T TIGR02823 215 AVDTVGGHTLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPM-----ALREAAWQRLATDLKPR 289 (323)
T ss_pred EEECccHHHHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCc-----hhHHHHHHHHHHHhhcC
Confidence 9999998877779999999999999996643333333345557888988876432111 22345677788888888
Q ss_pred CCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 164 KLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 164 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
.+.+. ...++++++++||+.+. +++..+|+|+++
T Consensus 290 ~~~~~-~~~~~l~~~~~a~~~~~--~~~~~~k~vv~~ 323 (323)
T TIGR02823 290 NLESI-TREITLEELPEALEQIL--AGQHRGRTVVDV 323 (323)
T ss_pred CCcCc-eeeecHHHHHHHHHHHh--CCCccceEEEeC
Confidence 88764 56899999999999999 888889999863
No 52
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.87 E-value=2.1e-20 Score=144.24 Aligned_cols=180 Identities=24% Similarity=0.317 Sum_probs=134.6
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHH-Hh-HHHhhCCCCCeEEEe
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEEL-RN-ISRDASIPKPKLALN 86 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~-~~-~~~~~~~~~~d~vid 86 (202)
..+++|+|+|++|++|++++|+|+..|+++++++++++ +.+.++++|++.++++.+. .. +.... +.++|+++|
T Consensus 145 ~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~v~~~~~~~~~~~~~~~-~~~~d~vld 219 (326)
T cd08289 145 PEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKAD----AADYLKKLGAKEVIPREELQEESIKPLE-KQRWAGAVD 219 (326)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHH----HHHHHHHcCCCEEEcchhHHHHHHHhhc-cCCcCEEEE
Confidence 34789999999889999999999999999999888876 6788899999988876543 33 55543 467999999
Q ss_pred cCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHcCCCC
Q psy2961 87 CVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLA 166 (202)
Q Consensus 87 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 166 (202)
|+|+......+++++++|+++.+|.........+...++.+++++.++....... ....+.+..+...+..+.+.
T Consensus 220 ~~g~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 294 (326)
T cd08289 220 PVGGKTLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPM-----ELRRRIWRRLATDLKPTQLL 294 (326)
T ss_pred CCcHHHHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCc-----hHHHHHHHHHHhhcCccccc
Confidence 9998777779999999999999996543333333455668889988875321100 11233444554444333344
Q ss_pred CCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 167 APAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 167 ~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
+.+.++++++++++||+.+. +++..+|+|+++
T Consensus 295 ~~~~~~~~l~~~~~a~~~~~--~~~~~gkvvv~~ 326 (326)
T cd08289 295 NEIKQEITLDELPEALKQIL--QGRVTGRTVVKL 326 (326)
T ss_pred cccceEeeHHHHHHHHHHHh--cCcccceEEEeC
Confidence 45689999999999999999 888889999864
No 53
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.87 E-value=1.8e-20 Score=144.76 Aligned_cols=188 Identities=18% Similarity=0.185 Sum_probs=140.8
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeCh--hHHHh-HHHhhCCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTE--EELRN-ISRDASIP 79 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~--~~~~~-~~~~~~~~ 79 (202)
.+.+++++|++|+|+|+.+++|++++|+|+..|+++++++++++ +.+.++++|++.+++. .++.+ +.+.+.+.
T Consensus 133 ~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 208 (327)
T PRK10754 133 RKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQ----KAQRAKKAGAWQVINYREENIVERVKEITGGK 208 (327)
T ss_pred HhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCC
Confidence 34577899999999998889999999999999999998887765 5788888999888864 34556 77777778
Q ss_pred CCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeE-EEEechhHhhhcccHHHHHHHHHHHHH
Q psy2961 80 KPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITL-RGHWMTRWQKENKESAERKSMMNELTE 158 (202)
Q Consensus 80 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (202)
++|+++||+|+......+++++++|+++.+|........++...+..++..+ .......+. ..+....+.+.++++
T Consensus 209 ~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 285 (327)
T PRK10754 209 KVRVVYDSVGKDTWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYI---TTREELTEASNELFS 285 (327)
T ss_pred CeEEEEECCcHHHHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeeccc---CCHHHHHHHHHHHHH
Confidence 8999999999887777999999999999998654321122222222222111 111111110 112455667888999
Q ss_pred HHHcCCCCCC--cceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 159 MMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 159 ~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
++.+|.+.+. +.++|++++++++++.+. .+...+|+|++
T Consensus 286 ~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~~~~~ 326 (327)
T PRK10754 286 LIASGVIKVDVAEQQKFPLKDAQRAHEILE--SRATQGSSLLI 326 (327)
T ss_pred HHHCCCeeeecccCcEEcHHHHHHHHHHHH--cCCCcceEEEe
Confidence 9999999864 468999999999999998 88888999986
No 54
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=99.87 E-value=6.5e-21 Score=149.19 Aligned_cols=178 Identities=20% Similarity=0.252 Sum_probs=133.5
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHhcCCceEeChhH-----HHh-HHHh
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEEE-----LRN-ISRD 75 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~-----~~~-~~~~ 75 (202)
.+....++|++|||+|+ |++|++++|+|+..|+ ++++++++++ +.+.++++|++.++++.+ +.. +.+.
T Consensus 170 ~~~~~~~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~~~~~----~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~ 244 (361)
T cd08231 170 DRAGPVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVIDGSPE----RLELAREFGADATIDIDELPDPQRRAIVRDI 244 (361)
T ss_pred HhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHH----HHHHHHHcCCCeEEcCcccccHHHHHHHHHH
Confidence 34445569999999986 5999999999999999 7877776654 678889999998886432 224 6777
Q ss_pred hCCCCCeEEEecCCCch-HHHHHHhcccCcEEEEEeccCC-CCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHH
Q psy2961 76 ASIPKPKLALNCVGGNS-ATNLLRTLVSKGVMVTYGGMSR-EPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMM 153 (202)
Q Consensus 76 ~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 153 (202)
+++.++|++|||+|+.. ....+++++++|+++.+|.... ....++...++.+++++.+++... .+.+
T Consensus 245 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 313 (361)
T cd08231 245 TGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYD-----------PSHL 313 (361)
T ss_pred hCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCC-----------chhH
Confidence 77778999999998754 4568999999999999986542 122344444578899998886432 2235
Q ss_pred HHHHHHHHcC----CCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 154 NELTEMMRTG----KLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 154 ~~~~~~~~~g----~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
.++++++.++ .+.+.++++|+++++++||+.+. ++. .+|+||.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~--~~~-~~k~vi~ 360 (361)
T cd08231 314 YRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAE--SGT-ALKVVID 360 (361)
T ss_pred HHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHH--cCC-ceEEEeC
Confidence 5666666665 34445788999999999999988 665 4799985
No 55
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=99.87 E-value=2e-20 Score=144.89 Aligned_cols=171 Identities=20% Similarity=0.301 Sum_probs=137.4
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCCCCe
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPKPK 82 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~~~d 82 (202)
.++.+|++|+|+| +|++|++++++|+.+|+++++++++++ +++.++++|+++++++. ++.. +.+. .++|
T Consensus 159 ~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~----~~~~~~~~g~~~~i~~~~~~~~~~~~~~---~~~d 230 (333)
T cd08296 159 SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSD----KADLARKLGAHHYIDTSKEDVAEALQEL---GGAK 230 (333)
T ss_pred cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChH----HHHHHHHcCCcEEecCCCccHHHHHHhc---CCCC
Confidence 4788999999999 569999999999999999998887765 68888999999888753 4444 5544 4799
Q ss_pred EEEecCCC-chHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHH
Q psy2961 83 LALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMR 161 (202)
Q Consensus 83 ~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (202)
+++|++|. ......+++++++|+++.+|... ...+++...++.+++++.++.... .+.+..+++++.
T Consensus 231 ~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~~~~~ 298 (333)
T cd08296 231 LILATAPNAKAISALVGGLAPRGKLLILGAAG-EPVAVSPLQLIMGRKSIHGWPSGT-----------ALDSEDTLKFSA 298 (333)
T ss_pred EEEECCCchHHHHHHHHHcccCCEEEEEecCC-CCCCcCHHHHhhcccEEEEeCcCC-----------HHHHHHHHHHHH
Confidence 99999864 45556899999999999999654 334555556678999999987332 244777888888
Q ss_pred cCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 162 TGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 162 ~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
++++++.+ .+|+++++++||+.+. .++..||+|++
T Consensus 299 ~~~l~~~v-~~~~~~~~~~a~~~~~--~~~~~gk~v~~ 333 (333)
T cd08296 299 LHGVRPMV-ETFPLEKANEAYDRMM--SGKARFRVVLT 333 (333)
T ss_pred hCCCCceE-EEEEHHHHHHHHHHHH--CCCCceeEEeC
Confidence 99888764 6899999999999999 88889999874
No 56
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.87 E-value=7.4e-21 Score=143.98 Aligned_cols=157 Identities=18% Similarity=0.180 Sum_probs=122.5
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcCCceEeChhHHHh-HHHhhCCCCCeE
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKL 83 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~d~ 83 (202)
....+|++|+|+|+| ++|++++|+|+.+|++ ++++..+++ +++.++++|++.++++.+..+ +.+.+.+.++|+
T Consensus 116 ~~~~~g~~VlV~G~G-~vG~~~~~~ak~~G~~~Vi~~~~~~~----r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~ 190 (280)
T TIGR03366 116 AGDLKGRRVLVVGAG-MLGLTAAAAAAAAGAARVVAADPSPD----RRELALSFGATALAEPEVLAERQGGLQNGRGVDV 190 (280)
T ss_pred ccCCCCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCHH----HHHHHHHcCCcEecCchhhHHHHHHHhCCCCCCE
Confidence 445699999999985 9999999999999997 655544443 788999999999988765555 767776678999
Q ss_pred EEecCCCchH-HHHHHhcccCcEEEEEeccCC-CCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHH
Q psy2961 84 ALNCVGGNSA-TNLLRTLVSKGVMVTYGGMSR-EPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMR 161 (202)
Q Consensus 84 vid~~g~~~~-~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (202)
+||++|.+.. ..++++++++|+++.+|.... .+.+++...++.+++++.|+.... .+.++++++++.
T Consensus 191 vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~~~i~g~~~~~-----------~~~~~~~~~~l~ 259 (280)
T TIGR03366 191 ALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRWLTIRGVHNYE-----------PRHLDQAVRFLA 259 (280)
T ss_pred EEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCCcEEEecCCCC-----------HHHHHHHHHHHH
Confidence 9999997764 468999999999999996542 344566777888999999976432 345888999998
Q ss_pred cC--CCCC--CcceeechhhH
Q psy2961 162 TG--KLAA--PAHKFVTLKNF 178 (202)
Q Consensus 162 ~g--~~~~--~~~~~~~~~~~ 178 (202)
++ ++.+ .++++||++++
T Consensus 260 ~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 260 ANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred hhCCCCCHHHHhhcccccccC
Confidence 75 4443 37889999863
No 57
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.86 E-value=3.1e-20 Score=143.48 Aligned_cols=183 Identities=23% Similarity=0.331 Sum_probs=144.1
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHh-cCCceEeChh--HHHh-HHHhhCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADYVFTEE--ELRN-ISRDASI 78 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~-lg~~~v~~~~--~~~~-~~~~~~~ 78 (202)
.+.+++.+|++|+|+|+++++|++++|+|+..|+++++++++++ +.+.+++ +|++.++++. ++.. +.+.+.
T Consensus 138 ~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~- 212 (329)
T cd05288 138 TEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDE----KCRWLVEELGFDAAINYKTPDLAEALKEAAP- 212 (329)
T ss_pred HhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHhhcCCceEEecCChhHHHHHHHhcc-
Confidence 34567889999999998889999999999999999998887765 5777777 9998888753 4555 666654
Q ss_pred CCCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcC-----CCcccccccCeeEEEEechhHhhhcccHHHHHHHH
Q psy2961 79 PKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQ-----IPTSAFIFKDITLRGHWMTRWQKENKESAERKSMM 153 (202)
Q Consensus 79 ~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 153 (202)
.++|+++||+|+......+++++++|+++.+|........ ++....+.++.++.++....+. ....+.+
T Consensus 213 ~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 286 (329)
T cd05288 213 DGIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYA------DRFPEAL 286 (329)
T ss_pred CCceEEEEcchHHHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhH------HHHHHHH
Confidence 6899999999987777799999999999999865433221 2234456778888887654322 2335678
Q ss_pred HHHHHHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEE
Q psy2961 154 NELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 198 (202)
Q Consensus 154 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~ 198 (202)
.++.+++.+|.+.+.....+++++++++|+.+. .++..+|+++
T Consensus 287 ~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~--~~~~~gkvvv 329 (329)
T cd05288 287 AELAKWLAEGKLKYREDVVEGLENAPEAFLGLF--TGKNTGKLVV 329 (329)
T ss_pred HHHHHHHHCCCccccccccccHHHHHHHHHHHh--cCCCccceeC
Confidence 999999999999887667799999999999998 7777788874
No 58
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.86 E-value=5.3e-20 Score=141.44 Aligned_cols=179 Identities=21% Similarity=0.266 Sum_probs=138.7
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeC-hhHHHh-HHHhhCCCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFT-EEELRN-ISRDASIPK 80 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~-~~~~~~-~~~~~~~~~ 80 (202)
.+..++++|++|+|+|+++++|++++|+|+..|+++++++++++ +.+.++++|++.+++ ..++.. +.+. +.+
T Consensus 135 ~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~i~~~--~~~ 208 (320)
T cd08243 135 FRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPE----RAALLKELGADEVVIDDGAIAEQLRAA--PGG 208 (320)
T ss_pred HHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHhcCCcEEEecCccHHHHHHHh--CCC
Confidence 34567889999999999889999999999999999999888775 578888899988774 334445 6555 578
Q ss_pred CeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcC--CCcccc--cccCeeEEEEechhHhhhcccHHHHHHHHHHH
Q psy2961 81 PKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQ--IPTSAF--IFKDITLRGHWMTRWQKENKESAERKSMMNEL 156 (202)
Q Consensus 81 ~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~--~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 156 (202)
+|+++||+|+......+++++++|+++.+|...+.... ...... +.+++++.++.... ...+.++.+
T Consensus 209 ~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 279 (320)
T cd08243 209 FDKVLELVGTATLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGD---------VPQTPLQEL 279 (320)
T ss_pred ceEEEECCChHHHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhh---------hhHHHHHHH
Confidence 99999999987777799999999999999864332111 111111 25667777665432 123568889
Q ss_pred HHHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEE
Q psy2961 157 TEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 198 (202)
Q Consensus 157 ~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~ 198 (202)
.+++.++.+.+.+.+.++++++++|++.+. .+...+|+|+
T Consensus 280 ~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~--~~~~~~kvvv 319 (320)
T cd08243 280 FDFVAAGHLDIPPSKVFTFDEIVEAHAYME--SNRAFGKVVV 319 (320)
T ss_pred HHHHHCCceecccccEEcHHHHHHHHHHHH--hCCCCCcEEe
Confidence 999999999887778999999999999998 7777888876
No 59
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=99.86 E-value=2.5e-20 Score=144.82 Aligned_cols=168 Identities=15% Similarity=0.227 Sum_probs=122.3
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHH-CC-CcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeE
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARH-WG-LKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKL 83 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~-~g-~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~ 83 (202)
+.+++|++|+|+|+| ++|++++|+|+. .| .+|+++..+++ +++.+++.+....++ ++. ...++|+
T Consensus 159 ~~~~~g~~VlV~G~G-~vGl~~~~~a~~~~g~~~vi~~~~~~~----k~~~a~~~~~~~~~~--~~~------~~~g~d~ 225 (341)
T cd08237 159 IAHKDRNVIGVWGDG-NLGYITALLLKQIYPESKLVVFGKHQE----KLDLFSFADETYLID--DIP------EDLAVDH 225 (341)
T ss_pred cCCCCCCEEEEECCC-HHHHHHHHHHHHhcCCCcEEEEeCcHh----HHHHHhhcCceeehh--hhh------hccCCcE
Confidence 346889999999975 999999999996 55 46777766654 678887766654332 111 1136999
Q ss_pred EEecCCCc----hHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHH
Q psy2961 84 ALNCVGGN----SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEM 159 (202)
Q Consensus 84 vid~~g~~----~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (202)
+||++|++ .+..++++++++|+++.+|... .+..++...++.+++++.|+.... .+.+++++++
T Consensus 226 viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~~k~~~i~g~~~~~-----------~~~~~~~~~~ 293 (341)
T cd08237 226 AFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSE-YPVPINTRMVLEKGLTLVGSSRST-----------REDFERAVEL 293 (341)
T ss_pred EEECCCCCccHHHHHHHHHhCcCCcEEEEEeecC-CCcccCHHHHhhCceEEEEecccC-----------HHHHHHHHHH
Confidence 99999963 3455899999999999999543 334556666788999999976421 2457889999
Q ss_pred HHcC-----CCCCCcceeechh---hHHHHHHHHhhhcCCCCceEEEeec
Q psy2961 160 MRTG-----KLAAPAHKFVTLK---NFQEALMNTMSIQGKSGVKYYIDFR 201 (202)
Q Consensus 160 ~~~g-----~~~~~~~~~~~~~---~~~~a~~~~~~~~~~~~gkvv~~~~ 201 (202)
+.+| .+++.++++|+++ ++.++|+... ++ ..||+|++++
T Consensus 294 ~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~--~~-~~gKvvi~~~ 340 (341)
T cd08237 294 LSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDL--TN-SWGKTVMEWE 340 (341)
T ss_pred HHhCCcccCChHHHhccccccccHHHHHHHHHHHh--hc-CcceEEEEee
Confidence 9998 4556688999985 5566666554 33 6889999875
No 60
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.86 E-value=7.4e-20 Score=142.15 Aligned_cols=177 Identities=21% Similarity=0.286 Sum_probs=141.3
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCCCCe
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPKPK 82 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~~~d 82 (202)
.+++++++|||+|+++++|++++++|+..|+++++++++++ +.+.++++|++.++++. ++.. +.+.+++.++|
T Consensus 161 ~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vd 236 (341)
T cd08297 161 AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDE----KLELAKELGADAFVDFKKSDDVEAVKELTGGGGAH 236 (341)
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHH----HHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCCC
Confidence 36889999999999988999999999999999999988875 57788889999888754 4555 77777677899
Q ss_pred EEEecCCC-chHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHH
Q psy2961 83 LALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMR 161 (202)
Q Consensus 83 ~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (202)
+++|+.++ ......+++++++|+++.+|........++...+..++.++.+..... .+.++++++++.
T Consensus 237 ~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 305 (341)
T cd08297 237 AVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGT-----------RQDLQEALEFAA 305 (341)
T ss_pred EEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCC-----------HHHHHHHHHHHH
Confidence 99996664 445568999999999999985543322444444457788887754321 356888999999
Q ss_pred cCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 162 TGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 162 ~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
++.+.+.+ ..|++++++++|+.+. .+...+|++++|
T Consensus 306 ~~~l~~~~-~~~~~~~~~~a~~~~~--~~~~~gkvvi~~ 341 (341)
T cd08297 306 RGKVKPHI-QVVPLEDLNEVFEKME--EGKIAGRVVVDF 341 (341)
T ss_pred cCCCccee-EEEcHHHHHHHHHHHH--cCCccceEEEeC
Confidence 99998744 6799999999999999 888889999875
No 61
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=99.86 E-value=6e-20 Score=142.60 Aligned_cols=174 Identities=20% Similarity=0.276 Sum_probs=137.9
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHCC-CcEEEEecCcccHHHHHHHHHhcCCceEeChhH-HHh-HHHhhCCCCCe
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARHWG-LKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE-LRN-ISRDASIPKPK 82 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~~g-~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~-~~~-~~~~~~~~~~d 82 (202)
..+.+|++|||+|++ ++|++++|+|+..| .++++++++++ +.+.++++|+++++++.+ +.. +.+.+.+.++|
T Consensus 163 ~~~~~~~~vlI~g~~-~vg~~~~~~a~~~g~~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~d 237 (340)
T cd05284 163 PYLDPGSTVVVIGVG-GLGHIAVQILRALTPATVIAVDRSEE----ALKLAERLGADHVLNASDDVVEEVRELTGGRGAD 237 (340)
T ss_pred ccCCCCCEEEEEcCc-HHHHHHHHHHHHhCCCcEEEEeCCHH----HHHHHHHhCCcEEEcCCccHHHHHHHHhCCCCCC
Confidence 357889999999966 69999999999999 79988887765 578888999998887533 445 77777667899
Q ss_pred EEEecCCC-chHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHH
Q psy2961 83 LALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMR 161 (202)
Q Consensus 83 ~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (202)
+++|++|+ ......+++++++|+++.+|.... ..++....+.+++++.+..... .+.+.+++++++
T Consensus 238 vvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~ 304 (340)
T cd05284 238 AVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH--GRLPTSDLVPTEISVIGSLWGT-----------RAELVEVVALAE 304 (340)
T ss_pred EEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC--CccCHHHhhhcceEEEEEeccc-----------HHHHHHHHHHHH
Confidence 99999997 455568999999999999985432 2333334457888888875321 345788889999
Q ss_pred cCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 162 TGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 162 ~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
+|.+.+ +.+.|+++++++||+.+. +++..+|+++.+
T Consensus 305 ~g~l~~-~~~~~~~~~~~~a~~~~~--~~~~~gkvv~~~ 340 (340)
T cd05284 305 SGKVKV-EITKFPLEDANEALDRLR--EGRVTGRAVLVP 340 (340)
T ss_pred hCCCCc-ceEEEeHHHHHHHHHHHH--cCCccceEEecC
Confidence 999886 456899999999999999 888889999753
No 62
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.86 E-value=5.9e-20 Score=143.29 Aligned_cols=180 Identities=19% Similarity=0.240 Sum_probs=132.1
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIP 79 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~ 79 (202)
+.+++++|++|||+|+ |++|++++|+|+..|++ ++++.++++ +.+.++++|++.++++. ++.. +...+.+.
T Consensus 160 ~~~~~~~g~~vlI~g~-g~iG~~~~~lak~~G~~~v~~~~~~~~----~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~ 234 (351)
T cd08285 160 ELANIKLGDTVAVFGI-GPVGLMAVAGARLRGAGRIIAVGSRPN----RVELAKEYGATDIVDYKNGDVVEQILKLTGGK 234 (351)
T ss_pred HccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHH----HHHHHHHcCCceEecCCCCCHHHHHHHHhCCC
Confidence 4567889999999975 59999999999999996 555555543 67888999999988753 4555 66666667
Q ss_pred CCeEEEecCCCch-HHHHHHhcccCcEEEEEeccCCC-CcCCCccc--ccccCeeEEEEechhHhhhcccHHHHHHHHHH
Q psy2961 80 KPKLALNCVGGNS-ATNLLRTLVSKGVMVTYGGMSRE-PVQIPTSA--FIFKDITLRGHWMTRWQKENKESAERKSMMNE 155 (202)
Q Consensus 80 ~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 155 (202)
++|+++||+|++. ....+++++++|+++.+|..... ...++... ...+..++.+..... ..+.+++
T Consensus 235 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------~~~~~~~ 304 (351)
T cd08285 235 GVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPG----------GRLRMER 304 (351)
T ss_pred CCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCC----------ccccHHH
Confidence 8999999999764 45689999999999999865432 11222111 113344554432110 1345888
Q ss_pred HHHHHHcCCCCC---CcceeechhhHHHHHHHHhhhcCC-CCceEEEee
Q psy2961 156 LTEMMRTGKLAA---PAHKFVTLKNFQEALMNTMSIQGK-SGVKYYIDF 200 (202)
Q Consensus 156 ~~~~~~~g~~~~---~~~~~~~~~~~~~a~~~~~~~~~~-~~gkvv~~~ 200 (202)
+++++.+|++++ .+.++++++++++||+.+. +++ ...|+++++
T Consensus 305 ~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~--~~~~~~~k~~~~~ 351 (351)
T cd08285 305 LASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMK--DKPDDLIKPVIIF 351 (351)
T ss_pred HHHHHHcCCCChhhceeccccCHHHHHHHHHHHh--cccCCeEEEEEeC
Confidence 999999999998 2345799999999999998 665 578999875
No 63
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.85 E-value=8.8e-20 Score=141.39 Aligned_cols=186 Identities=18% Similarity=0.282 Sum_probs=136.2
Q ss_pred ccccCCCC-----CCEEEEeCCCcHHHHHHHHHHHHC-CCcEEEEecCcccHHHHHHHHHhcCCceEeCh-hHHHh-HHH
Q psy2961 3 KDYNSLSP-----GDVVIQNGANSACGQNVIQIARHW-GLKTINIVRNRDDIDKLKSYLKSLGADYVFTE-EELRN-ISR 74 (202)
Q Consensus 3 ~~~~~~~~-----g~~VlI~g~~~~vG~~~i~la~~~-g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~-~~~~~-~~~ 74 (202)
...+++++ |++|||+|+++++|++++|+|+.. |+++++++++++ +.+.++++|+++++++ .++.. +++
T Consensus 136 ~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~----~~~~l~~~g~~~~~~~~~~~~~~i~~ 211 (336)
T TIGR02817 136 FDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPE----SQEWVLELGAHHVIDHSKPLKAQLEK 211 (336)
T ss_pred HHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHH----HHHHHHHcCCCEEEECCCCHHHHHHH
Confidence 34566666 999999999889999999999998 999999988775 5788899999998873 34555 666
Q ss_pred hhCCCCCeEEEecCCC-chHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEech-hHhhhcccHHHHHHH
Q psy2961 75 DASIPKPKLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMT-RWQKENKESAERKSM 152 (202)
Q Consensus 75 ~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~ 152 (202)
..+.++|+++|++++ ......+++++++|+++.++.. ..++...+..+++++.+.... ......+........
T Consensus 212 -~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (336)
T TIGR02817 212 -LGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDP----AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHL 286 (336)
T ss_pred -hcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEccc----ccccchhhhhcceEEEEEEeecccccchhhhhhhHHH
Confidence 344679999999865 4556689999999999987522 133433444455666654332 111111111112367
Q ss_pred HHHHHHHHHcCCCCCCcceee---chhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 153 MNELTEMMRTGKLAAPAHKFV---TLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 153 ~~~~~~~~~~g~~~~~~~~~~---~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
++++++++.++.+++.+.+.+ +++++++||+.+. .++..+|++++
T Consensus 287 ~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~--~~~~~gkvvv~ 334 (336)
T TIGR02817 287 LNRVARLVDAGKIRTTLAETFGTINAANLKRAHALIE--SGKARGKIVLE 334 (336)
T ss_pred HHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHH--cCCccceEEEe
Confidence 899999999999987666555 4799999999999 88888999875
No 64
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.85 E-value=1.7e-19 Score=139.36 Aligned_cols=183 Identities=22% Similarity=0.387 Sum_probs=142.5
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeCh--hHHHh-HHHhhCCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTE--EELRN-ISRDASIP 79 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~--~~~~~-~~~~~~~~ 79 (202)
.+..++++|++|+|+|++|++|++++|+|+..|+++++++++++ +.+.++++|++.+++. .++.. +....+ .
T Consensus 132 ~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~-~ 206 (329)
T cd08250 132 EEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDE----KAEFLKSLGCDRPINYKTEDLGEVLKKEYP-K 206 (329)
T ss_pred HHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHH----HHHHHHHcCCceEEeCCCccHHHHHHHhcC-C
Confidence 34567899999999999889999999999999999999887765 5778888998888753 33444 555443 6
Q ss_pred CCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCC----------cCCCcccccccCeeEEEEechhHhhhcccHHHH
Q psy2961 80 KPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREP----------VQIPTSAFIFKDITLRGHWMTRWQKENKESAER 149 (202)
Q Consensus 80 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 149 (202)
++|+++|++|+......+++++++|+++.+|...... ..++ ...+.+++++.++....+.. ..
T Consensus 207 ~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------~~ 279 (329)
T cd08250 207 GVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAK------LI 279 (329)
T ss_pred CCeEEEECCcHHHHHHHHHHhccCCeEEEEecccCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHH------HH
Confidence 7999999999877777999999999999998654321 0111 23457788888887654322 24
Q ss_pred HHHHHHHHHHHHcCCCCCC--cceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 150 KSMMNELTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 150 ~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
.+.+.++.+++.++.+.+. +.+.++++++++||+.+. .+...+|++++
T Consensus 280 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~kvvv~ 329 (329)
T cd08250 280 PQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLY--SGKNIGKVVVE 329 (329)
T ss_pred HHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHH--cCCCCceEEeC
Confidence 5678889999999998874 446699999999999998 77778899874
No 65
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=99.85 E-value=7.9e-20 Score=141.58 Aligned_cols=173 Identities=22% Similarity=0.355 Sum_probs=136.9
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHh-HHHhhCCCCCeEEE
Q psy2961 7 SLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKLAL 85 (202)
Q Consensus 7 ~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~d~vi 85 (202)
++.++++|+|+|+++++|++++|+|+..|+++++++++++ +.+.++++ ++.++++.++.. +++. .++|+++
T Consensus 159 ~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~v~~~---~~~d~~l 230 (334)
T PRK13771 159 GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSES----KAKIVSKY-ADYVIVGSKFSEEVKKI---GGADIVI 230 (334)
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHH-HHHhcCchhHHHHHHhc---CCCcEEE
Confidence 7789999999999889999999999999999998888765 56777777 776776555545 5553 2699999
Q ss_pred ecCCCchHHHHHHhcccCcEEEEEeccCCCCc-CCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHcCC
Q psy2961 86 NCVGGNSATNLLRTLVSKGVMVTYGGMSREPV-QIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGK 164 (202)
Q Consensus 86 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 164 (202)
||+|+......+++++++|+++.+|....... .......+.+++++.+.... ..+.++.++++++++.
T Consensus 231 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 299 (334)
T PRK13771 231 ETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISA-----------TKRDVEEALKLVAEGK 299 (334)
T ss_pred EcCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCC-----------CHHHHHHHHHHHHcCC
Confidence 99999877779999999999999996543221 22333335677788776321 1455888999999999
Q ss_pred CCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 165 LAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 165 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
+.+.+.++++++++++||+.+. .+...+|+++..
T Consensus 300 l~~~~~~~~~~~~~~~a~~~~~--~~~~~~kvv~~~ 333 (334)
T PRK13771 300 IKPVIGAEVSLSEIDKALEELK--DKSRIGKILVKP 333 (334)
T ss_pred CcceEeeeEcHHHHHHHHHHHH--cCCCcceEEEec
Confidence 9877788999999999999998 777788999864
No 66
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=99.85 E-value=1.2e-19 Score=140.71 Aligned_cols=178 Identities=20% Similarity=0.314 Sum_probs=139.5
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPK 80 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~~ 80 (202)
+..++.+|++|||+|+ +++|.+++|+|+.+|+++++++++++ +.+.++++|+++++++. ++.. +.+.+.+.+
T Consensus 153 ~~~~l~~g~~vLI~g~-g~vG~~a~~lA~~~g~~v~~~~~s~~----~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~ 227 (337)
T cd08261 153 RRAGVTAGDTVLVVGA-GPIGLGVIQVAKARGARVIVVDIDDE----RLEFARELGADDTINVGDEDVAARLRELTDGEG 227 (337)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEECCCHH----HHHHHHHhCCCEEecCcccCHHHHHHHHhCCCC
Confidence 4567889999999975 59999999999999999998877765 57888889999988753 4555 777776678
Q ss_pred CeEEEecCCCc-hHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHH
Q psy2961 81 PKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEM 159 (202)
Q Consensus 81 ~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (202)
+|+++||+|+. .....+++|+++|+++.++... ....++...+..+++++.+... ...+.++++.++
T Consensus 228 vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~l 295 (337)
T cd08261 228 ADVVIDATGNPASMEEAVELVAHGGRVVLVGLSK-GPVTFPDPEFHKKELTILGSRN-----------ATREDFPDVIDL 295 (337)
T ss_pred CCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCC-CCCccCHHHHHhCCCEEEEecc-----------CChhhHHHHHHH
Confidence 99999999875 4456899999999999988554 2223333344556677666431 124568889999
Q ss_pred HHcCCCCC--CcceeechhhHHHHHHHHhhhcC-CCCceEEEee
Q psy2961 160 MRTGKLAA--PAHKFVTLKNFQEALMNTMSIQG-KSGVKYYIDF 200 (202)
Q Consensus 160 ~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~-~~~gkvv~~~ 200 (202)
+.+|.+.+ .+..+++++++++|++.+. ++ ...+|+|++|
T Consensus 296 ~~~~~i~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~k~v~~~ 337 (337)
T cd08261 296 LESGKVDPEALITHRFPFEDVPEAFDLWE--APPGGVIKVLIEF 337 (337)
T ss_pred HHcCCCChhhheEEEeeHHHHHHHHHHHh--cCCCceEEEEEeC
Confidence 99999998 6778999999999999998 77 4778999875
No 67
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.85 E-value=4.2e-19 Score=135.36 Aligned_cols=185 Identities=17% Similarity=0.210 Sum_probs=143.4
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeCh--hHHHh-HHHhhCCCCC
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTE--EELRN-ISRDASIPKP 81 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~--~~~~~-~~~~~~~~~~ 81 (202)
..++++|++|+|+++++++|++++|+++..|+++++++++++ +.+.++++|.+.++++ .++.. +.+.+.+.++
T Consensus 115 ~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~ 190 (303)
T cd08251 115 RAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDD----KLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGV 190 (303)
T ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHH----HHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCc
Confidence 567899999999999999999999999999999999887765 5788888999888864 34555 7777777789
Q ss_pred eEEEecCCCchHHHHHHhcccCcEEEEEeccCCCC-cCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHH
Q psy2961 82 KLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREP-VQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMM 160 (202)
Q Consensus 82 d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (202)
|+++|++++......+++++++|+++.++...... ..++.. .+.++..+....+..+.... +....+.+.++.+++
T Consensus 191 d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 267 (303)
T cd08251 191 DVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLS-VLSNNQSFHSVDLRKLLLLD--PEFIADYQAEMVSLV 267 (303)
T ss_pred eEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChh-HhhcCceEEEEehHHhhhhC--HHHHHHHHHHHHHHH
Confidence 99999998877777899999999999998543221 122222 23445555555544332222 244567889999999
Q ss_pred HcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEE
Q psy2961 161 RTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 198 (202)
Q Consensus 161 ~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~ 198 (202)
.+|.+.+...+.|++++++++++.+. .+...+|+++
T Consensus 268 ~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~iv~ 303 (303)
T cd08251 268 EEGELRPTVSRIFPFDDIGEAYRYLS--DRENIGKVVV 303 (303)
T ss_pred HCCCccCCCceEEcHHHHHHHHHHHH--hCCCcceEeC
Confidence 99999887788999999999999998 7777888874
No 68
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.85 E-value=3.8e-19 Score=137.16 Aligned_cols=181 Identities=19% Similarity=0.262 Sum_probs=140.1
Q ss_pred CCC-CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHh-HHHhhCCCCCeEE
Q psy2961 7 SLS-PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKLA 84 (202)
Q Consensus 7 ~~~-~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~d~v 84 (202)
+.. +|++|+|+|++|++|++++|+|+.+|+++++++++++ +.+.++++|+++++++.+... +..... .++|.+
T Consensus 142 ~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~ 216 (324)
T cd08288 142 GVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPE----EADYLRSLGASEIIDRAELSEPGRPLQK-ERWAGA 216 (324)
T ss_pred CcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHH----HHHHHHhcCCCEEEEcchhhHhhhhhcc-CcccEE
Confidence 344 6789999999889999999999999999999987775 678889999999988766544 554443 358999
Q ss_pred EecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHcCC
Q psy2961 85 LNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGK 164 (202)
Q Consensus 85 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 164 (202)
+|+++++.....+..++.+|+++.+|.....+...+...++.+++++.+........ ....+.+..+.+++.++.
T Consensus 217 ~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 291 (324)
T cd08288 217 VDTVGGHTLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPI-----ERRRAAWARLARDLDPAL 291 (324)
T ss_pred EECCcHHHHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccc-----hhhHHHHHHHHHHHhcCC
Confidence 999998665667888899999999996532222333444557889998876432111 223567888888999998
Q ss_pred CCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 165 LAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 165 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
+.+ +.+.++++++++||+.+. .++..+|+++++
T Consensus 292 ~~~-i~~~~~~~~~~~a~~~~~--~~~~~~~vvv~~ 324 (324)
T cd08288 292 LEA-LTREIPLADVPDAAEAIL--AGQVRGRVVVDV 324 (324)
T ss_pred ccc-cceeecHHHHHHHHHHHh--cCCccCeEEEeC
Confidence 876 478999999999999999 888889999864
No 69
>PRK10083 putative oxidoreductase; Provisional
Probab=99.84 E-value=2.1e-19 Score=139.55 Aligned_cols=178 Identities=15% Similarity=0.250 Sum_probs=132.4
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHH-CCCcEEEEecCcccHHHHHHHHHhcCCceEeChhH--HHh-HHHhhCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARH-WGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE--LRN-ISRDASIP 79 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~-~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~--~~~-~~~~~~~~ 79 (202)
+.+++++|++|+|+|+ |++|++++|+|+. +|++++.++++.++ +.+.++++|++.++++.+ +.. +.. .+.
T Consensus 154 ~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~~G~~~v~~~~~~~~---~~~~~~~~Ga~~~i~~~~~~~~~~~~~--~g~ 227 (339)
T PRK10083 154 GRTGPTEQDVALIYGA-GPVGLTIVQVLKGVYNVKAVIVADRIDE---RLALAKESGADWVINNAQEPLGEALEE--KGI 227 (339)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHhCCCCEEEEEcCCHH---HHHHHHHhCCcEEecCccccHHHHHhc--CCC
Confidence 4567899999999995 5999999999996 69986665554432 688889999999987543 333 422 123
Q ss_pred CCeEEEecCCCc-hHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHH
Q psy2961 80 KPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTE 158 (202)
Q Consensus 80 ~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (202)
++|++||++|++ .....+++++++|+++.+|.... ...+....+..+++++.+.... .+.++++++
T Consensus 228 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~ 294 (339)
T PRK10083 228 KPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE-PSEIVQQGITGKELSIFSSRLN------------ANKFPVVID 294 (339)
T ss_pred CCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CceecHHHHhhcceEEEEEecC------------hhhHHHHHH
Confidence 567999999965 45668999999999999985542 2223333334566666664421 345888999
Q ss_pred HHHcCCCCCC--cceeechhhHHHHHHHHhhhcC-CCCceEEEeecC
Q psy2961 159 MMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQG-KSGVKYYIDFRQ 202 (202)
Q Consensus 159 ~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~-~~~gkvv~~~~~ 202 (202)
++++|++++. ++++|+++++++||+.+. ++ ...+|+++.+.+
T Consensus 295 ~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~--~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 295 WLSKGLIDPEKLITHTFDFQHVADAIELFE--KDQRHCCKVLLTFAE 339 (339)
T ss_pred HHHcCCCChHHheeeeecHHHHHHHHHHHh--cCCCceEEEEEecCC
Confidence 9999999973 678999999999999987 54 356899998753
No 70
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.84 E-value=4.8e-19 Score=137.09 Aligned_cols=180 Identities=17% Similarity=0.221 Sum_probs=145.4
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh---HHHh-HHHhhCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE---ELRN-ISRDASI 78 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~---~~~~-~~~~~~~ 78 (202)
.+.+++++|++|+|+|+ +++|++++++|+..|+++++++++++ +.+.++++|.+.++++. ++.. +...+.+
T Consensus 153 ~~~~~~~~g~~vli~g~-g~~g~~~~~~a~~~G~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 227 (336)
T cd08276 153 FGLGPLKPGDTVLVQGT-GGVSLFALQFAKAAGARVIATSSSDE----KLERAKALGADHVINYRTTPDWGEEVLKLTGG 227 (336)
T ss_pred HhhcCCCCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHcCCCEEEcCCcccCHHHHHHHHcCC
Confidence 34567899999999965 59999999999999999888887665 57888888998888643 3555 7777777
Q ss_pred CCCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHH
Q psy2961 79 PKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTE 158 (202)
Q Consensus 79 ~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (202)
.++|+++|++++......+++++++|+++.+|.............++.+++++.++.... .+.+.++.+
T Consensus 228 ~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 296 (336)
T cd08276 228 RGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS-----------RAQFEAMNR 296 (336)
T ss_pred CCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc-----------HHHHHHHHH
Confidence 789999999998777779999999999999986554333444556678899999887542 346888888
Q ss_pred HHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 159 MMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 159 ~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
++.++.+.+.+...+++++++++|+.+. ++...+|+++++
T Consensus 297 l~~~~~l~~~~~~~~~~~~~~~a~~~~~--~~~~~~kvv~~~ 336 (336)
T cd08276 297 AIEAHRIRPVIDRVFPFEEAKEAYRYLE--SGSHFGKVVIRV 336 (336)
T ss_pred HHHcCCcccccCcEEeHHHHHHHHHHHH--hCCCCceEEEeC
Confidence 9989988877778999999999999998 777788999863
No 71
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.84 E-value=2.9e-19 Score=136.69 Aligned_cols=171 Identities=22% Similarity=0.285 Sum_probs=136.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeC-hhHHHhHHHhhCCCCCeEEEecC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFT-EEELRNISRDASIPKPKLALNCV 88 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~-~~~~~~~~~~~~~~~~d~vid~~ 88 (202)
+|++|+|+|+++++|++++++|+..|++++.++++++ +.+.++++|++.++. ++++ .. .++|+++|++
T Consensus 132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~------~~-~~~d~vl~~~ 200 (305)
T cd08270 132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPA----RAEGLRELGAAEVVVGGSEL------SG-APVDLVVDSV 200 (305)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHcCCcEEEeccccc------cC-CCceEEEECC
Confidence 5999999999889999999999999999999887665 688888899876653 2211 11 4799999999
Q ss_pred CCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccc--cCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHcCCCC
Q psy2961 89 GGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIF--KDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLA 166 (202)
Q Consensus 89 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 166 (202)
|+......+++++++|+++.+|........++...+.. ++.++.++.... +....+.+..+.+++.++++.
T Consensus 201 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~ 273 (305)
T cd08270 201 GGPQLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYD-------GEPLAADLARLLGLVAAGRLD 273 (305)
T ss_pred CcHHHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccC-------HHHHHHHHHHHHHHHHCCCcc
Confidence 98877779999999999999986543223344444443 588888877553 133456789999999999999
Q ss_pred CCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 167 APAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 167 ~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
+.+.++++++++++||+.+. ++...+|+|+++
T Consensus 274 ~~~~~~~~~~~~~~a~~~~~--~~~~~gkvvi~~ 305 (305)
T cd08270 274 PRIGWRGSWTEIDEAAEALL--ARRFRGKAVLDV 305 (305)
T ss_pred ceeccEEcHHHHHHHHHHHH--cCCCCceEEEeC
Confidence 87778999999999999998 888889999874
No 72
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=99.84 E-value=2.2e-19 Score=140.72 Aligned_cols=180 Identities=20% Similarity=0.262 Sum_probs=136.4
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASI 78 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~ 78 (202)
.+.+.+++|++|+|+|+ |++|++++|+|+..|++ ++++.++++ +.+.++++|++.++++. ++.+ +.+.+ +
T Consensus 179 ~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~~~~~~----k~~~~~~~g~~~~i~~~~~~~~~~v~~~~-~ 252 (365)
T cd08278 179 LNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVDIVDS----RLELAKELGATHVINPKEEDLVAAIREIT-G 252 (365)
T ss_pred hhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHH----HHHHHHHcCCcEEecCCCcCHHHHHHHHh-C
Confidence 44567889999999976 59999999999999996 555544443 67888899999888753 4555 66666 6
Q ss_pred CCCeEEEecCCCch-HHHHHHhcccCcEEEEEeccC-CCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHH
Q psy2961 79 PKPKLALNCVGGNS-ATNLLRTLVSKGVMVTYGGMS-REPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNEL 156 (202)
Q Consensus 79 ~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 156 (202)
.++|+++||+|++. ....+++++++|+++.+|... .....++...++.+++++.++....+ ...+.++++
T Consensus 253 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 324 (365)
T cd08278 253 GGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDS--------VPQEFIPRL 324 (365)
T ss_pred CCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCc--------ChHHHHHHH
Confidence 78999999998654 456899999999999998543 22234555555578888888764321 114567888
Q ss_pred HHHHHcCCCCC-CcceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 157 TEMMRTGKLAA-PAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 157 ~~~~~~g~~~~-~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
++++++|++.+ .+...++++++++|++.+. ++.. .|+|++
T Consensus 325 ~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~--~~~~-~k~~~~ 365 (365)
T cd08278 325 IELYRQGKFPFDKLVTFYPFEDINQAIADSE--SGKV-IKPVLR 365 (365)
T ss_pred HHHHHcCCCChHHheEEecHHHHHHHHHHHH--CCCc-eEEEEC
Confidence 99999999865 3556899999999999988 6654 488874
No 73
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=99.84 E-value=2.2e-19 Score=141.74 Aligned_cols=178 Identities=18% Similarity=0.226 Sum_probs=136.7
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcCCceEeChh---HHHh-HHHhhCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEE---ELRN-ISRDASI 78 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~---~~~~-~~~~~~~ 78 (202)
+.+++++|++|+|+|+ |++|++++++|+..|+. ++++.++++ +.+.+++++...++++. ++.. +.+.+.+
T Consensus 178 ~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi~~~~~~~----~~~~~~~~~~~~vi~~~~~~~~~~~l~~~~~~ 252 (386)
T cd08283 178 ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAIDRVPE----RLEMARSHLGAETINFEEVDDVVEALRELTGG 252 (386)
T ss_pred hhccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHH----HHHHHHHcCCcEEEcCCcchHHHHHHHHHcCC
Confidence 4567889999999976 59999999999999985 777776665 68888888444566542 3566 7777776
Q ss_pred CCCeEEEecCCCc----------------------hHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEec
Q psy2961 79 PKPKLALNCVGGN----------------------SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWM 136 (202)
Q Consensus 79 ~~~d~vid~~g~~----------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~ 136 (202)
.++|++||++|+. ....++++++++|+++.+|........++....+.+++++.+...
T Consensus 253 ~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~ 332 (386)
T cd08283 253 RGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNKFPIGAAMNKGLTLRMGQT 332 (386)
T ss_pred CCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCccCHHHHHhCCcEEEeccC
Confidence 7899999999764 234588999999999999865443233444456678888888652
Q ss_pred hhHhhhcccHHHHHHHHHHHHHHHHcCCCCCC--cceeechhhHHHHHHHHhhhcCC-CCceEEEe
Q psy2961 137 TRWQKENKESAERKSMMNELTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGK-SGVKYYID 199 (202)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~-~~gkvv~~ 199 (202)
. ..+.+.++++++.++++.+. +.++|+++++++||+.+. ++. ..+|+|++
T Consensus 333 ~-----------~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~--~~~~~~~k~~~~ 385 (386)
T cd08283 333 H-----------VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFD--KKEDGCIKVVLK 385 (386)
T ss_pred C-----------chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHH--hCCCCeEEEEec
Confidence 2 24568889999999999874 568899999999999988 655 56899985
No 74
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.84 E-value=6.7e-19 Score=135.41 Aligned_cols=191 Identities=17% Similarity=0.275 Sum_probs=148.5
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeCh--hHHHh-HHHhhCCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTE--EELRN-ISRDASIP 79 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~--~~~~~-~~~~~~~~ 79 (202)
.+...+.+|++|+|+|+++++|++++++++..|+++++++++++ +.+.++++|.+.+++. .++.. +.....+.
T Consensus 132 ~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 207 (325)
T TIGR02824 132 FQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDE----KCAACEALGADIAINYREEDFVEVVKAETGGK 207 (325)
T ss_pred HHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHcCCcEEEecCchhHHHHHHHHcCCC
Confidence 35677899999999999889999999999999999998887765 4667788888777754 34545 66666666
Q ss_pred CCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHH
Q psy2961 80 KPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEM 159 (202)
Q Consensus 80 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (202)
++|+++|++|+......+++++++|+++.+|........++...++.+++++.+.....+.... .+......+.++.++
T Consensus 208 ~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 286 (325)
T TIGR02824 208 GVDVILDIVGGSYLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAE-KAAIAAELREHVWPL 286 (325)
T ss_pred CeEEEEECCchHHHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhh-hHHHHHHHHHHHHHH
Confidence 8999999999877677899999999999998644322244444455889999988755421111 113346678888999
Q ss_pred HHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 160 MRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 160 ~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
+.++.+.+.+++.+++++++++++.+. .+...+|+++++
T Consensus 287 ~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~ 325 (325)
T TIGR02824 287 LASGRVRPVIDKVFPLEDAAQAHALME--SGDHIGKIVLTV 325 (325)
T ss_pred HHCCcccCccccEEeHHHHHHHHHHHH--hCCCcceEEEeC
Confidence 999999877788999999999999988 777788998864
No 75
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.84 E-value=6.8e-19 Score=133.16 Aligned_cols=186 Identities=20% Similarity=0.312 Sum_probs=144.7
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcC--CceEeChh--HHHh-HHHhhCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLG--ADYVFTEE--ELRN-ISRDASI 78 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg--~~~v~~~~--~~~~-~~~~~~~ 78 (202)
+..++++|++|+|+|+++++|++++|+|+..|++++.++++++ +.+.+++++ ++.++++. ++.. +.+.+.+
T Consensus 102 ~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (293)
T cd05195 102 DLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEE----KREFLRELGGPVDHIFSSRDLSFADGILRATGG 177 (293)
T ss_pred HHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHhCCCcceEeecCchhHHHHHHHHhCC
Confidence 4567899999999998889999999999999999999887765 577777887 66677643 4555 7777766
Q ss_pred CCCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCc-CCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHH
Q psy2961 79 PKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPV-QIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELT 157 (202)
Q Consensus 79 ~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 157 (202)
.++|+++|++|+......+++++++|+++.+|....... .++. ..+.+++++.......+....+ ....+.+.++.
T Consensus 178 ~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 254 (293)
T cd05195 178 RGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGM-RPFLRNVSFSSVDLDQLARERP--ELLRELLREVL 254 (293)
T ss_pred CCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccch-hhhccCCeEEEEeHHHHhhhCh--HHHHHHHHHHH
Confidence 789999999999877779999999999999985543211 1222 2345567777777655543222 34466789999
Q ss_pred HHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEE
Q psy2961 158 EMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 198 (202)
Q Consensus 158 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~ 198 (202)
+++.++++.+..+..++++++.++|+.+. .+...+|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~ivv 293 (293)
T cd05195 255 ELLEAGVLKPLPPTVVPSASEIDAFRLMQ--SGKHIGKVVL 293 (293)
T ss_pred HHHHCCCcccCCCeeechhhHHHHHHHHh--cCCCCceecC
Confidence 99999999888888999999999999998 7777788874
No 76
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.84 E-value=3.6e-19 Score=136.53 Aligned_cols=180 Identities=19% Similarity=0.210 Sum_probs=138.5
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcCCceEeCh--hHHHh-HHHhhCCCC
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTE--EELRN-ISRDASIPK 80 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~v~~~--~~~~~-~~~~~~~~~ 80 (202)
.+++++|++|+|+|+ +++|.+++|+|+..|++ +++++++++ +.+.++++|++.++++ .++.. +.+.+.+.+
T Consensus 124 ~~~~~~~~~vlI~g~-g~vg~~~~~la~~~g~~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~ 198 (312)
T cd08269 124 RGWIRAGKTVAVIGA-GFIGLLFLQLAAAAGARRVIAIDRRPA----RLALARELGATEVVTDDSEAIVERVRELTGGAG 198 (312)
T ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHH----HHHHHHHhCCceEecCCCcCHHHHHHHHcCCCC
Confidence 567889999999975 59999999999999999 877776654 5778888999888864 34556 777777778
Q ss_pred CeEEEecCCCch-HHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHH
Q psy2961 81 PKLALNCVGGNS-ATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEM 159 (202)
Q Consensus 81 ~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (202)
+|+++||+|+.. ....+++|+++|+++.+|........++...+..++..+.++..... ....+.+++++++
T Consensus 199 vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 271 (312)
T cd08269 199 ADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDP-------RIGLEGMREAVKL 271 (312)
T ss_pred CCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCc-------cchhhHHHHHHHH
Confidence 999999998754 45589999999999999855432333444445567777766543221 2235679999999
Q ss_pred HHcCCCCC--CcceeechhhHHHHHHHHhhhcC-CCCceEEE
Q psy2961 160 MRTGKLAA--PAHKFVTLKNFQEALMNTMSIQG-KSGVKYYI 198 (202)
Q Consensus 160 ~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~-~~~gkvv~ 198 (202)
++++.+.+ .+.++++++++++|++.+. ++ ..++|+++
T Consensus 272 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~~~~~ 311 (312)
T cd08269 272 IADGRLDLGSLLTHEFPLEELGDAFEAAR--RRPDGFIKGVI 311 (312)
T ss_pred HHcCCCCchhheeeeecHHHHHHHHHHHH--hCCCCceEEEe
Confidence 99999987 3568899999999999998 55 44689887
No 77
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=99.84 E-value=3e-19 Score=140.16 Aligned_cols=180 Identities=20% Similarity=0.281 Sum_probs=139.2
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASI 78 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~ 78 (202)
.+.+.+.++++|+|+|+ +++|++++++|+..|++ +++++++++ +.+.++++|++.++++. ++.. +.+...+
T Consensus 180 ~~~~~~~~g~~VlI~g~-g~vG~~~~~lak~~G~~~vi~~~~s~~----~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~ 254 (367)
T cd08263 180 KHAADVRPGETVAVIGV-GGVGSSAIQLAKAFGASPIIAVDVRDE----KLAKAKELGATHTVNAAKEDAVAAIREITGG 254 (367)
T ss_pred HhcccCCCCCEEEEECC-cHHHHHHHHHHHHcCCCeEEEEeCCHH----HHHHHHHhCCceEecCCcccHHHHHHHHhCC
Confidence 34566789999999965 59999999999999998 666666654 57788889999888753 4555 7766666
Q ss_pred CCCeEEEecCCCc-hHHHHHHhcccCcEEEEEeccCCC-CcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHH
Q psy2961 79 PKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSRE-PVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNEL 156 (202)
Q Consensus 79 ~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 156 (202)
.++|+++|++++. .....+++++++|+++.++..... ...++...++.+++++.++.... ..+.++++
T Consensus 255 ~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 324 (367)
T cd08263 255 RGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGAR----------PRQDLPEL 324 (367)
T ss_pred CCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecCCCC----------cHHHHHHH
Confidence 7899999999987 666689999999999999854322 22334444446777877743211 13568889
Q ss_pred HHHHHcCCCCCC--cceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 157 TEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 157 ~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
+++++++.+.+. +++.++++++.+||+.+. ++...||+|++
T Consensus 325 ~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~--~~~~~g~~~~~ 367 (367)
T cd08263 325 VGLAASGKLDPEALVTHKYKLEEINEAYENLR--KGLIHGRAIVE 367 (367)
T ss_pred HHHHHcCCCCcccceeEEecHHHHHHHHHHHh--cCCccceeeeC
Confidence 999999999874 568899999999999998 88888999874
No 78
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.84 E-value=6.9e-19 Score=135.09 Aligned_cols=188 Identities=20% Similarity=0.302 Sum_probs=146.1
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPK 80 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~~ 80 (202)
+.+.+.++++|+|+|+++++|++++++++..|++++.+.++++ +.+.++++|++.+++.. ++.. +...+.+.+
T Consensus 133 ~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 208 (323)
T cd05276 133 QLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEE----KLEACRALGADVAINYRTEDFAEEVKEATGGRG 208 (323)
T ss_pred HhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHH----HHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCC
Confidence 4567889999999999889999999999999999888877655 56777888988877643 4445 666666678
Q ss_pred CeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHH
Q psy2961 81 PKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMM 160 (202)
Q Consensus 81 ~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (202)
+|+++|++|+......+++++++|+++.++........++...++.+++++.++......... .+......+.++.+++
T Consensus 209 ~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 287 (323)
T cd05276 209 VDVILDMVGGDYLARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEE-KAALAAAFREHVWPLF 287 (323)
T ss_pred eEEEEECCchHHHHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhc-cHHHHHHHHHHHHHHH
Confidence 999999999888777899999999999998554333334444455788888888765432111 1133456778888999
Q ss_pred HcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEE
Q psy2961 161 RTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 198 (202)
Q Consensus 161 ~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~ 198 (202)
.++++.+..++.|+++++++|++.+. ++...+|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~kvv~ 323 (323)
T cd05276 288 ASGRIRPVIDKVFPLEEAAEAHRRME--SNEHIGKIVL 323 (323)
T ss_pred HCCCccCCcceEEcHHHHHHHHHHHH--hCCCcceEeC
Confidence 99999887788999999999999998 7777788874
No 79
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.84 E-value=2.5e-19 Score=141.31 Aligned_cols=174 Identities=18% Similarity=0.293 Sum_probs=133.9
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHhcCCceEeChh-----HHHh-HHHhhCC
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEE-----ELRN-ISRDASI 78 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~-----~~~~-~~~~~~~ 78 (202)
+++++|++|+|+|+ |++|++++|+|+..|+ +++++.++++ +.+.++++|++.++++. ++.. +.+.+.+
T Consensus 199 ~~~~~g~~VlV~g~-g~vG~~ai~lA~~~G~~~vi~~~~~~~----~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g 273 (384)
T cd08265 199 GGFRPGAYVVVYGA-GPIGLAAIALAKAAGASKVIAFEISEE----RRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKG 273 (384)
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHH----HHHHHHHcCCCEEEcccccccccHHHHHHHhcCC
Confidence 67899999999975 5999999999999999 5766665554 67888999999888754 5556 7777877
Q ss_pred CCCeEEEecCCCc--hHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHH
Q psy2961 79 PKPKLALNCVGGN--SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNEL 156 (202)
Q Consensus 79 ~~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 156 (202)
.++|+++|++|++ .....+++|+++|+++.+|.... ...++...+..+..++.+..... ....+.++
T Consensus 274 ~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~~~----------~~~~~~~~ 342 (384)
T cd08265 274 WGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT-TVPLHLEVLQVRRAQIVGAQGHS----------GHGIFPSV 342 (384)
T ss_pred CCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC-CCcccHHHHhhCceEEEEeeccC----------CcchHHHH
Confidence 8899999999974 44568999999999999985432 22333344555666777765321 13458889
Q ss_pred HHHHHcCCCCCC--cceeechhhHHHHHHHHhhhcCCCCceEEE
Q psy2961 157 TEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYI 198 (202)
Q Consensus 157 ~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~ 198 (202)
++++.++.+.+. ++++|+++++++||+.+. ++ ..+|+|+
T Consensus 343 ~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~--~~-~~~kvvv 383 (384)
T cd08265 343 IKLMASGKIDMTKIITARFPLEGIMEAIKAAS--ER-TDGKITI 383 (384)
T ss_pred HHHHHcCCCChHHheEEEeeHHHHHHHHHHHh--cC-CCceEEe
Confidence 999999999864 568899999999999966 54 5788875
No 80
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.84 E-value=4.9e-19 Score=137.69 Aligned_cols=175 Identities=21% Similarity=0.314 Sum_probs=134.6
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcCCceEeChh--H---HHh-HHHhh
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEE--E---LRN-ISRDA 76 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~---~~~-~~~~~ 76 (202)
+.+++++|++|+|.|+ |++|++++|+|+..|++ +++++++++ +.+.++++|++.++++. + +.. +.+.+
T Consensus 156 ~~~~~~~g~~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~----~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~ 230 (343)
T cd05285 156 RRAGVRPGDTVLVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPS----RLEFAKELGATHTVNVRTEDTPESAEKIAELL 230 (343)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHH----HHHHHHHcCCcEEeccccccchhHHHHHHHHh
Confidence 4678899999999876 59999999999999998 666666654 57888889999988753 2 255 77777
Q ss_pred CCCCCeEEEecCCCc-hHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHH
Q psy2961 77 SIPKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNE 155 (202)
Q Consensus 77 ~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 155 (202)
.+.++|+++||+|+. .....+++++++|+++.+|.... ...++...+..+++.+.++... .+.+.+
T Consensus 231 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 297 (343)
T cd05285 231 GGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKP-EVTLPLSAASLREIDIRGVFRY------------ANTYPT 297 (343)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CCccCHHHHhhCCcEEEEeccC------------hHHHHH
Confidence 777899999999986 55668999999999999984432 2333433455667777765432 145788
Q ss_pred HHHHHHcCCCC--CCcceeechhhHHHHHHHHhhhcC-CCCceEEE
Q psy2961 156 LTEMMRTGKLA--APAHKFVTLKNFQEALMNTMSIQG-KSGVKYYI 198 (202)
Q Consensus 156 ~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~-~~~gkvv~ 198 (202)
+++++.++.+. +.+.++|+++++.+|++.+. ++ ...+|++|
T Consensus 298 ~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~--~~~~~~~k~~~ 341 (343)
T cd05285 298 AIELLASGKVDVKPLITHRFPLEDAVEAFETAA--KGKKGVIKVVI 341 (343)
T ss_pred HHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHH--cCCCCeeEEEE
Confidence 88999999875 34567899999999999998 65 45689998
No 81
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=99.83 E-value=6.6e-19 Score=137.05 Aligned_cols=178 Identities=17% Similarity=0.254 Sum_probs=139.9
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh---HHHh-HHHhhCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE---ELRN-ISRDASI 78 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~---~~~~-~~~~~~~ 78 (202)
.+.+++.++++|+|+|+ +++|++++|+|+..|+++++++++++ +.+.++++|++.++++. ++.. +.....+
T Consensus 158 ~~~~~~~~~~~vlV~g~-g~vg~~~~~~a~~~G~~vi~~~~~~~----~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~ 232 (345)
T cd08260 158 VHQARVKPGEWVAVHGC-GGVGLSAVMIASALGARVIAVDIDDD----KLELARELGAVATVNASEVEDVAAAVRDLTGG 232 (345)
T ss_pred HHccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEeCCHH----HHHHHHHhCCCEEEccccchhHHHHHHHHhCC
Confidence 34567889999999995 69999999999999999999887776 57888889999888753 4445 6666655
Q ss_pred CCCeEEEecCCCc-hHHHHHHhcccCcEEEEEeccCCCC--cCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHH
Q psy2961 79 PKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREP--VQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNE 155 (202)
Q Consensus 79 ~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 155 (202)
++|++|||+|+. .....+++++++|+++.+|...... ..++...++.+++++.+..... .+.+++
T Consensus 233 -~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 300 (345)
T cd08260 233 -GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMP-----------AHRYDA 300 (345)
T ss_pred -CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCC-----------HHHHHH
Confidence 899999999864 4456899999999999998554322 2334444456778888765321 346888
Q ss_pred HHHHHHcCCCCCC--cceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 156 LTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 156 ~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
++++++++++.+. +...++++++++||+.+. .+...+|+|++
T Consensus 301 ~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~~v~~ 344 (345)
T cd08260 301 MLALIASGKLDPEPLVGRTISLDEAPDALAAMD--DYATAGITVIT 344 (345)
T ss_pred HHHHHHcCCCChhhheeEEecHHHHHHHHHHHH--cCCCCceEEec
Confidence 8999999998864 568899999999999999 88888898864
No 82
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=99.83 E-value=6.4e-19 Score=136.21 Aligned_cols=174 Identities=25% Similarity=0.451 Sum_probs=137.3
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHh-HHHhhCCCCCeEE
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKLA 84 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~d~v 84 (202)
+++.++++|+|+|++|++|++++++++..|++++.++++++ +.+.+++++.+.+++..++.+ +.+. .++|++
T Consensus 158 ~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~v 230 (332)
T cd08259 158 AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPE----KLKILKELGADYVIDGSKFSEDVKKL---GGADVV 230 (332)
T ss_pred hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHH----HHHHHHHcCCcEEEecHHHHHHHHhc---cCCCEE
Confidence 67889999999999999999999999999999988887665 567778888888887655545 5554 279999
Q ss_pred EecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHcCC
Q psy2961 85 LNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGK 164 (202)
Q Consensus 85 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 164 (202)
++++|.......+++++++|+++.++........+.......++.++.++... ....++++.+++.+|.
T Consensus 231 ~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 299 (332)
T cd08259 231 IELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISA-----------TKADVEEALKLVKEGK 299 (332)
T ss_pred EECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCC-----------CHHHHHHHHHHHHcCC
Confidence 99999888777899999999999998654332222322233466666665311 1455788889999999
Q ss_pred CCCCcceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 165 LAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 165 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
+.+.+.++|+++++++||+.+. ++...+|++++
T Consensus 300 l~~~~~~~~~~~~~~~a~~~~~--~~~~~~kvv~~ 332 (332)
T cd08259 300 IKPVIDRVVSLEDINEALEDLK--SGKVVGRIVLK 332 (332)
T ss_pred CccceeEEEcHHHHHHHHHHHH--cCCcccEEEeC
Confidence 9888888999999999999999 77778899874
No 83
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.83 E-value=5e-20 Score=123.91 Aligned_cols=113 Identities=27% Similarity=0.443 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCCCCeEEEecCCCch-HHHHH
Q psy2961 22 ACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPKPKLALNCVGGNS-ATNLL 97 (202)
Q Consensus 22 ~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~~~d~vid~~g~~~-~~~~~ 97 (202)
++|++++|+|++.|++|++++++++ +++.++++|++.++++. ++.+ +++.+++.++|+||||+|.+. +...+
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~----k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~ 76 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEE----KLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI 76 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHH----HHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHH----HHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHH
Confidence 6899999999999999999988775 78999999999999753 4777 999998889999999999554 45689
Q ss_pred HhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechh
Q psy2961 98 RTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTR 138 (202)
Q Consensus 98 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 138 (202)
++++++|+++.+|.......+++...++.+++++.|++.++
T Consensus 77 ~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 117 (130)
T PF00107_consen 77 KLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGS 117 (130)
T ss_dssp HHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGG
T ss_pred HHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCC
Confidence 99999999999997775666788888999999999999775
No 84
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.83 E-value=9.4e-19 Score=134.41 Aligned_cols=188 Identities=23% Similarity=0.354 Sum_probs=146.6
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPK 80 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~~ 80 (202)
+..++.+|++|+|+|+++++|++++++|+..|++++.++++++ +.+.++++|++.+++.. ++.. +...+.+.+
T Consensus 133 ~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~ 208 (323)
T cd08241 133 RRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEE----KLALARALGADHVIDYRDPDLRERVKALTGGRG 208 (323)
T ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHH----HHHHHHHcCCceeeecCCccHHHHHHHHcCCCC
Confidence 3567889999999999889999999999999999999887765 57788888988777643 4555 777776678
Q ss_pred CeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHH
Q psy2961 81 PKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMM 160 (202)
Q Consensus 81 ~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (202)
+|.++|++|+......+++++++|+++.+|........+.....+.+++++.+.....+.... +....+.+.++.+++
T Consensus 209 ~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 286 (323)
T cd08241 209 VDVVYDPVGGDVFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARRE--PELLRANLAELFDLL 286 (323)
T ss_pred cEEEEECccHHHHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchh--HHHHHHHHHHHHHHH
Confidence 999999999877777899999999999998543221112233345678888887755443322 134467888999999
Q ss_pred HcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 161 RTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 161 ~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
.++.+.+..+..|++++++++|+.+. .+...+|++++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~vvv~ 323 (323)
T cd08241 287 AEGKIRPHVSAVFPLEQAAEALRALA--DRKATGKVVLT 323 (323)
T ss_pred HCCCcccccceEEcHHHHHHHHHHHH--hCCCCCcEEeC
Confidence 99999877788999999999999988 67777888863
No 85
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.83 E-value=1.2e-18 Score=133.86 Aligned_cols=185 Identities=20% Similarity=0.277 Sum_probs=145.3
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPK 80 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~~ 80 (202)
+.+++.+|++|+|+|+++++|++++++++..|+++++++++++ +.+.+.++|++.+++.. +... +.+.+.+.+
T Consensus 138 ~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 213 (325)
T cd08253 138 HRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAE----GAELVRQAGADAVFNYRAEDLADRILAATAGQG 213 (325)
T ss_pred HHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCc
Confidence 4577889999999999889999999999999999998887765 57777888988887643 3444 666666678
Q ss_pred CeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHH
Q psy2961 81 PKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMM 160 (202)
Q Consensus 81 ~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (202)
+|+++||+++......+++++++|+++.++... ....++...++.++.++.+...+.. .+....+.+..+.+++
T Consensus 214 ~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 287 (325)
T cd08253 214 VDVIIEVLANVNLAKDLDVLAPGGRIVVYGSGG-LRGTIPINPLMAKEASIRGVLLYTA-----TPEERAAAAEAIAAGL 287 (325)
T ss_pred eEEEEECCchHHHHHHHHhhCCCCEEEEEeecC-CcCCCChhHHHhcCceEEeeehhhc-----CHHHHHHHHHHHHHHH
Confidence 999999999887777889999999999998654 2223444444567777777653321 1244567788888999
Q ss_pred HcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 161 RTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 161 ~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
.++.+.+.+.+.+++++++++++.+. .+...+|+++++
T Consensus 288 ~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~kvv~~~ 325 (325)
T cd08253 288 ADGALRPVIAREYPLEEAAAAHEAVE--SGGAIGKVVLDP 325 (325)
T ss_pred HCCCccCccccEEcHHHHHHHHHHHH--cCCCcceEEEeC
Confidence 99999887788999999999999998 778888999863
No 86
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=99.83 E-value=6.2e-19 Score=137.50 Aligned_cols=177 Identities=19% Similarity=0.252 Sum_probs=135.1
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIP 79 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~ 79 (202)
+...++++++|+|+|+ +++|++++|+|+..|+ +++++.++++ +.+.++++|++.++++. ++.. +.+...+
T Consensus 169 ~~~~~~~~~~vlI~g~-g~vg~~~~~~a~~~G~~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~- 242 (350)
T cd08240 169 KLMPLVADEPVVIIGA-GGLGLMALALLKALGPANIIVVDIDEA----KLEAAKAAGADVVVNGSDPDAAKRIIKAAGG- 242 (350)
T ss_pred hcccCCCCCEEEEECC-cHHHHHHHHHHHHcCCCeEEEEeCCHH----HHHHHHHhCCcEEecCCCccHHHHHHHHhCC-
Confidence 3444568999999975 6999999999999999 5666655544 67888889998888653 3444 6665555
Q ss_pred CCeEEEecCCCc-hHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHH
Q psy2961 80 KPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTE 158 (202)
Q Consensus 80 ~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (202)
++|++||++|.+ .....+++|+++|+++.+|..... ...+......++.++.+..... .+.+.++++
T Consensus 243 ~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~~ 310 (350)
T cd08240 243 GVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE-ATLPLPLLPLRALTIQGSYVGS-----------LEELRELVA 310 (350)
T ss_pred CCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC-CcccHHHHhhcCcEEEEcccCC-----------HHHHHHHHH
Confidence 899999999864 455689999999999999854432 2233333445778887766432 245788899
Q ss_pred HHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 159 MMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 159 ~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
+++++.+.+.+...++++++++||+.+. .+...+|+++++
T Consensus 311 ll~~~~i~~~~~~~~~~~~~~~a~~~~~--~~~~~gkvvv~~ 350 (350)
T cd08240 311 LAKAGKLKPIPLTERPLSDVNDALDDLK--AGKVVGRAVLKP 350 (350)
T ss_pred HHHcCCCccceeeEEcHHHHHHHHHHHH--cCCccceEEecC
Confidence 9999999877778999999999999998 778889999853
No 87
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.83 E-value=4.8e-19 Score=136.40 Aligned_cols=167 Identities=18% Similarity=0.247 Sum_probs=131.6
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeE
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKL 83 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~ 83 (202)
+..++++|++|+|+|+ |++|++++|+|+.+|+++++++++++ +.+.++++|++.++++.+. +.+.++|+
T Consensus 149 ~~~~~~~g~~vlV~g~-g~vg~~~~q~a~~~G~~vi~~~~~~~----~~~~~~~~g~~~~~~~~~~------~~~~~~d~ 217 (319)
T cd08242 149 EQVPITPGDKVAVLGD-GKLGLLIAQVLALTGPDVVLVGRHSE----KLALARRLGVETVLPDEAE------SEGGGFDV 217 (319)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHH----HHHHHHHcCCcEEeCcccc------ccCCCCCE
Confidence 4567899999999985 59999999999999999888887765 6888888999887765331 33467999
Q ss_pred EEecCCCch-HHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHc
Q psy2961 84 ALNCVGGNS-ATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRT 162 (202)
Q Consensus 84 vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (202)
++||+|+.. ....+++++++|+++..+... ....++...+..++.++.+.+... ++++.+++++
T Consensus 218 vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~--------------~~~~~~~~~~ 282 (319)
T cd08242 218 VVEATGSPSGLELALRLVRPRGTVVLKSTYA-GPASFDLTKAVVNEITLVGSRCGP--------------FAPALRLLRK 282 (319)
T ss_pred EEECCCChHHHHHHHHHhhcCCEEEEEcccC-CCCccCHHHheecceEEEEEeccc--------------HHHHHHHHHc
Confidence 999998754 455889999999999876433 233445555667888888865321 6778899999
Q ss_pred CCCC--CCcceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 163 GKLA--APAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 163 g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
++++ +.+.++|+++++++||+.+. .+. .+|+|++
T Consensus 283 ~~l~~~~~~~~~~~l~~~~~a~~~~~--~~~-~~k~vi~ 318 (319)
T cd08242 283 GLVDVDPLITAVYPLEEALEAFERAA--EPG-ALKVLLR 318 (319)
T ss_pred CCCChhhceEEEEeHHHHHHHHHHHh--cCC-ceEEEeC
Confidence 9994 45779999999999999998 665 5799886
No 88
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=99.83 E-value=1.7e-18 Score=134.81 Aligned_cols=178 Identities=17% Similarity=0.221 Sum_probs=134.1
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIP 79 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~ 79 (202)
..+++++|++|+|.|+ |++|++++|+|+..|+ +++++.++++ +.+.++++|++.++++. ++.. +...+.+.
T Consensus 161 ~~~~~~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~~~~~----~~~~~~~~g~~~vi~~~~~~~~~~i~~~~~~~ 235 (347)
T cd05278 161 ELAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVDSNPE----RLDLAKEAGATDIINPKNGDIVEQILELTGGR 235 (347)
T ss_pred hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCHH----HHHHHHHhCCcEEEcCCcchHHHHHHHHcCCC
Confidence 3567889999999775 6999999999999997 6666644443 57788889999888753 4555 77767667
Q ss_pred CCeEEEecCCC-chHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHH
Q psy2961 80 KPKLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTE 158 (202)
Q Consensus 80 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (202)
++|++||++|+ ......+++|+++|+++.+|..............+.+++++.+..... .+.++++.+
T Consensus 236 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 304 (347)
T cd05278 236 GVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV-----------RARMPELLD 304 (347)
T ss_pred CCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCc-----------hhHHHHHHH
Confidence 89999999988 455668999999999999985433221112223346777777654211 456889999
Q ss_pred HHHcCCCCCC--cceeechhhHHHHHHHHhhhcCCC-CceEEEe
Q psy2961 159 MMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKS-GVKYYID 199 (202)
Q Consensus 159 ~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~-~gkvv~~ 199 (202)
++.++.+.+. +...++++++++|++.+. .++. .+|+|++
T Consensus 305 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~~~vv~ 346 (347)
T cd05278 305 LIEEGKIDPSKLITHRFPLDDILKAYRLFD--NKPDGCIKVVIR 346 (347)
T ss_pred HHHcCCCChhHcEEEEecHHHHHHHHHHHh--cCCCCceEEEec
Confidence 9999999874 467899999999999988 6665 6799875
No 89
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.83 E-value=1.7e-18 Score=134.16 Aligned_cols=180 Identities=23% Similarity=0.322 Sum_probs=142.9
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIP 79 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~ 79 (202)
.+..++.++++|+|+|+++++|++++++++..|++++.+.++++ +.+.++.++.+.+++.. +... +...+.+.
T Consensus 159 ~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (342)
T cd08266 159 VTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSED----KLERAKELGADYVIDYRKEDFVREVRELTGKR 234 (342)
T ss_pred HHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHcCCCeEEecCChHHHHHHHHHhCCC
Confidence 34567889999999999999999999999999999988877665 56777778887777542 3444 65656556
Q ss_pred CCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHH
Q psy2961 80 KPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEM 159 (202)
Q Consensus 80 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (202)
++|+++|++|.......+++++++|+++.++........++....+.+++++.+..... ...+.++.++
T Consensus 235 ~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 303 (342)
T cd08266 235 GVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGT-----------KAELDEALRL 303 (342)
T ss_pred CCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCC-----------HHHHHHHHHH
Confidence 89999999998877778999999999999986654333334334467788888776432 3458888999
Q ss_pred HHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 160 MRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 160 ~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
++++.+.+.+++.|+++++++|++.+. .+...+|++++
T Consensus 304 l~~~~l~~~~~~~~~~~~~~~a~~~~~--~~~~~~kvv~~ 341 (342)
T cd08266 304 VFRGKLKPVIDSVFPLEEAAEAHRRLE--SREQFGKIVLT 341 (342)
T ss_pred HHcCCcccceeeeEcHHHHHHHHHHHH--hCCCCceEEEe
Confidence 999999887788999999999999998 77778899986
No 90
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=99.83 E-value=7.3e-19 Score=137.09 Aligned_cols=176 Identities=19% Similarity=0.282 Sum_probs=134.3
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPK 80 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~~ 80 (202)
+.+++++|++|+|.|+ |++|++++++|+.+|++++.++++.++ +.+.++++|++.++++. ++.. +.+.+++.+
T Consensus 168 ~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~~~~~---~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~ 243 (350)
T cd08256 168 DRANIKFDDVVVLAGA-GPLGLGMIGAARLKNPKKLIVLDLKDE---RLALARKFGADVVLNPPEVDVVEKIKELTGGYG 243 (350)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCHH---HHHHHHHcCCcEEecCCCcCHHHHHHHHhCCCC
Confidence 4567899999999555 699999999999999986655554432 67888899999888753 4555 777777778
Q ss_pred CeEEEecCCCc-hHHHHHHhcccCcEEEEEeccCCCCcCCCcccc-cccCeeEEEEechhHhhhcccHHHHHHHHHHHHH
Q psy2961 81 PKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAF-IFKDITLRGHWMTRWQKENKESAERKSMMNELTE 158 (202)
Q Consensus 81 ~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (202)
+|+++|++|+. .....+++++++|+++.+|.... ...++...+ ..+++++.++... ...+.++++
T Consensus 244 vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~------------~~~~~~~~~ 310 (350)
T cd08256 244 CDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGD-PVTVDWSIIGDRKELDVLGSHLG------------PYCYPIAID 310 (350)
T ss_pred CCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCC-CCccChhHhhcccccEEEEeccC------------chhHHHHHH
Confidence 99999999964 44568999999999999985432 222333222 2456777776533 124778899
Q ss_pred HHHcCCCCCC--cceeechhhHHHHHHHHhhhcCCCCceEEE
Q psy2961 159 MMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYI 198 (202)
Q Consensus 159 ~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~ 198 (202)
++.+|.+.+. +.++|+++++++||+.+. +++..+|+++
T Consensus 311 ~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~--~~~~~~kvv~ 350 (350)
T cd08256 311 LIASGRLPTDGIVTHQFPLEDFEEAFELMA--RGDDSIKVVL 350 (350)
T ss_pred HHHcCCCChhHheEEEeEHHHHHHHHHHHH--hCCCceEEeC
Confidence 9999999874 678999999999999999 7787889875
No 91
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.83 E-value=9.9e-19 Score=135.85 Aligned_cols=178 Identities=20% Similarity=0.270 Sum_probs=131.8
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhH------HHhHHHhhC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEE------LRNISRDAS 77 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~------~~~~~~~~~ 77 (202)
..+++++|++|+|+|+ +++|.+++|+|+.+|++++.++++.++ +.+.++++|++.++++.+ +..+.....
T Consensus 155 ~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~---~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~ 230 (341)
T cd08262 155 RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASDFSPE---RRALALAMGADIVVDPAADSPFAAWAAELARAG 230 (341)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHH---HHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhC
Confidence 3567899999999986 699999999999999986666654432 678888999988887432 112333445
Q ss_pred CCCCeEEEecCCCc-hHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHH
Q psy2961 78 IPKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNEL 156 (202)
Q Consensus 78 ~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 156 (202)
+.++|+++|++|+. .....+++++++|+++.+|...... .+.....+.+++++.++... ..+.+.++
T Consensus 231 ~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 298 (341)
T cd08262 231 GPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESD-NIEPALAIRKELTLQFSLGY-----------TPEEFADA 298 (341)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCC-ccCHHHHhhcceEEEEEecc-----------cHHHHHHH
Confidence 56799999999985 4556899999999999998553221 12222223466666654321 13357889
Q ss_pred HHHHHcCCCCCC--cceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 157 TEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 157 ~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
++++.+|.+.+. +.++++++++++||+.+. +++..+|+|++
T Consensus 299 ~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~--~~~~~~kvvv~ 341 (341)
T cd08262 299 LDALAEGKVDVAPMVTGTVGLDGVPDAFEALR--DPEHHCKILVD 341 (341)
T ss_pred HHHHHcCCCChHHheEEEeeHHHHHHHHHHHh--cCCCceEEEeC
Confidence 999999999864 468999999999999999 88888999974
No 92
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=99.83 E-value=1.3e-18 Score=134.81 Aligned_cols=177 Identities=19% Similarity=0.259 Sum_probs=138.9
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIP 79 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~ 79 (202)
.+..+++++++|||.|+ +++|++++++|+..|+++++++++++ +.+.++++|.+.++++. +... + ....+.
T Consensus 158 ~~~~~~~~~~~vli~g~-g~vG~~~~~la~~~G~~V~~~~~s~~----~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~ 231 (338)
T cd08254 158 VRAGEVKPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVDIKEE----KLELAKELGADEVLNSLDDSPKDKK-AAGLGG 231 (338)
T ss_pred HhccCCCCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEcCCHH----HHHHHHHhCCCEEEcCCCcCHHHHH-HHhcCC
Confidence 44567899999999865 59999999999999999888887765 57788889998888643 3444 5 555667
Q ss_pred CCeEEEecCCCc-hHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHH
Q psy2961 80 KPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTE 158 (202)
Q Consensus 80 ~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (202)
++|+++||+|.. .....+++|+++|+++.+|... ....++...++.++.++.+++... .+.+..+.+
T Consensus 232 ~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 299 (338)
T cd08254 232 GFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGR-DKLTVDLSDLIARELRIIGSFGGT-----------PEDLPEVLD 299 (338)
T ss_pred CceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCC-CCCccCHHHHhhCccEEEEeccCC-----------HHHHHHHHH
Confidence 899999999865 4456899999999999998543 223344455667777777755321 456888899
Q ss_pred HHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 159 MMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 159 ~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
+++++.+.+. .+.+++++++++++.+. +++..+|+|+.+
T Consensus 300 ll~~~~l~~~-~~~~~~~~~~~a~~~~~--~~~~~~kvv~~~ 338 (338)
T cd08254 300 LIAKGKLDPQ-VETRPLDEIPEVLERLH--KGKVKGRVVLVP 338 (338)
T ss_pred HHHcCCCccc-ceeEcHHHHHHHHHHHH--cCCccceEEEeC
Confidence 9999999877 67899999999999999 888889999864
No 93
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.83 E-value=2.3e-18 Score=130.13 Aligned_cols=185 Identities=22% Similarity=0.351 Sum_probs=141.5
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCC--ceEeCh--hHHHh-HHHhhCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA--DYVFTE--EELRN-ISRDASI 78 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~--~~v~~~--~~~~~-~~~~~~~ 78 (202)
+...+.+|++|+|+|+.+++|++++++|+..|+++++++++++ +.+.++++|+ +.++++ .++.. +.+.+.+
T Consensus 98 ~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 173 (288)
T smart00829 98 DLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPE----KRDFLRELGIPDDHIFSSRDLSFADEILRATGG 173 (288)
T ss_pred HHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHcCCChhheeeCCCccHHHHHHHHhCC
Confidence 4567889999999998889999999999999999999887765 5778888998 666654 24555 6666666
Q ss_pred CCCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCC-CcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHH
Q psy2961 79 PKPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSRE-PVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELT 157 (202)
Q Consensus 79 ~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 157 (202)
.++|+++|++++......+++++++|+++.+|..... ...++... +.+++++.+.....+. .. +....+.+.++.
T Consensus 174 ~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~ 249 (288)
T smart00829 174 RGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALE-EG--PDRIRELLAEVL 249 (288)
T ss_pred CCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhh-hcCCceEEEEEHHHhh-cC--hHHHHHHHHHHH
Confidence 7899999999976666789999999999999854321 11223322 4667777777655443 11 133456678889
Q ss_pred HHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEE
Q psy2961 158 EMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 198 (202)
Q Consensus 158 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~ 198 (202)
+++.++++.+...+.|++++++++++.+. .+...+|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ivv 288 (288)
T smart00829 250 ELFAEGVLRPLPVTVFPISDVEDAFRYMQ--QGKHIGKVVL 288 (288)
T ss_pred HHHHCCCccCcCceEEcHHHHHHHHHHHh--cCCCcceEeC
Confidence 99999998876678899999999999998 7766778764
No 94
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.82 E-value=1.6e-18 Score=134.55 Aligned_cols=172 Identities=19% Similarity=0.305 Sum_probs=136.2
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEE
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLAL 85 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vi 85 (202)
..+++|++|+|.|+ +++|++++++|+..|++++.++++++ +.+.++++|++.+++..+...... . +.++|++|
T Consensus 165 ~~~~~g~~vlV~g~-g~vG~~~~~~a~~~G~~v~~~~~~~~----~~~~~~~~g~~~vi~~~~~~~~~~-~-~~~~d~v~ 237 (337)
T cd05283 165 NGVGPGKRVGVVGI-GGLGHLAVKFAKALGAEVTAFSRSPS----KKEDALKLGADEFIATKDPEAMKK-A-AGSLDLII 237 (337)
T ss_pred cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEcCCHH----HHHHHHHcCCcEEecCcchhhhhh-c-cCCceEEE
Confidence 45789999999875 59999999999999999888887765 578888899998887543211211 1 36799999
Q ss_pred ecCCCch-HHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHcCC
Q psy2961 86 NCVGGNS-ATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGK 164 (202)
Q Consensus 86 d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 164 (202)
||+|+.. ....+++++++|+++.+|..... ..++...++.+++++.++.... .+.++.+++++.+++
T Consensus 238 ~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~~~~~~~~ 305 (337)
T cd05283 238 DTVSASHDLDPYLSLLKPGGTLVLVGAPEEP-LPVPPFPLIFGRKSVAGSLIGG-----------RKETQEMLDFAAEHG 305 (337)
T ss_pred ECCCCcchHHHHHHHhcCCCEEEEEeccCCC-CccCHHHHhcCceEEEEecccC-----------HHHHHHHHHHHHhCC
Confidence 9999885 56689999999999999865432 2455555667899999877542 345888889999999
Q ss_pred CCCCcceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 165 LAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 165 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
+.+. .+.++++++++||+.+. +++..||+|++
T Consensus 306 l~~~-~~~~~~~~~~~a~~~~~--~~~~~~k~v~~ 337 (337)
T cd05283 306 IKPW-VEVIPMDGINEALERLE--KGDVRYRFVLD 337 (337)
T ss_pred Cccc-eEEEEHHHHHHHHHHHH--cCCCcceEeeC
Confidence 9875 47899999999999999 88888999874
No 95
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=99.82 E-value=1.2e-18 Score=135.70 Aligned_cols=177 Identities=19% Similarity=0.238 Sum_probs=135.0
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCC-CcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWG-LKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIP 79 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g-~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~ 79 (202)
...++.+|++|+|.|+ |++|++++|+|+..| .+++++.++++ +.+.++++|++.++++. ++.. +.+.+.+.
T Consensus 160 ~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~----~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~ 234 (345)
T cd08286 160 LNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDN----RLEVAKKLGATHTVNSAKGDAIEQVLELTDGR 234 (345)
T ss_pred hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHH----HHHHHHHhCCCceeccccccHHHHHHHHhCCC
Confidence 4567889999999886 599999999999999 67766444333 67888899999888753 4545 66666667
Q ss_pred CCeEEEecCCCchH-HHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHH
Q psy2961 80 KPKLALNCVGGNSA-TNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTE 158 (202)
Q Consensus 80 ~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (202)
++|+++||+|+... ..++++++++|+++.+|... ....++...++.+++++.+.... .+.+.++.+
T Consensus 235 ~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~ 301 (345)
T cd08286 235 GVDVVIEAVGIPATFELCQELVAPGGHIANVGVHG-KPVDLHLEKLWIKNITITTGLVD------------TNTTPMLLK 301 (345)
T ss_pred CCCEEEECCCCHHHHHHHHHhccCCcEEEEecccC-CCCCcCHHHHhhcCcEEEeecCc------------hhhHHHHHH
Confidence 89999999986544 45789999999999998433 23445555556788888775322 134788889
Q ss_pred HHHcCCCCCC--cceeechhhHHHHHHHHhhhcCC--CCceEEEee
Q psy2961 159 MMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGK--SGVKYYIDF 200 (202)
Q Consensus 159 ~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~--~~gkvv~~~ 200 (202)
+++++.+.+. ++++++++++++||+.+. ... ...|++|.+
T Consensus 302 ~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~--~~~~~~~~k~~~~~ 345 (345)
T cd08286 302 LVSSGKLDPSKLVTHRFKLSEIEKAYDTFS--AAAKHKALKVIIDF 345 (345)
T ss_pred HHHcCCCChHHcEEeEeeHHHHHHHHHHHh--ccCCCCeeEEEEeC
Confidence 9999998863 568999999999999988 542 456999864
No 96
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.82 E-value=2.2e-18 Score=132.66 Aligned_cols=185 Identities=18% Similarity=0.283 Sum_probs=144.3
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh-HHHh-HHHhhCCCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE-ELRN-ISRDASIPK 80 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~-~~~~-~~~~~~~~~ 80 (202)
.+.+++.+|++++|+|+.+++|++++++|+..|++++.++++ + +.+.++++|.+.+++.. ++.. +...+.+.+
T Consensus 137 ~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 211 (326)
T cd08272 137 VDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-E----KAAFARSLGADPIIYYRETVVEYVAEHTGGRG 211 (326)
T ss_pred HHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-H----HHHHHHHcCCCEEEecchhHHHHHHHhcCCCC
Confidence 456788999999999988899999999999999999988866 4 57888889988877632 2555 777777778
Q ss_pred CeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechh--HhhhcccHHHHHHHHHHHHH
Q psy2961 81 PKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTR--WQKENKESAERKSMMNELTE 158 (202)
Q Consensus 81 ~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~ 158 (202)
+|+++|++++......+++++++|+++.++... . .+......+++++.+..... .... .+....+.+..+.+
T Consensus 212 ~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 285 (326)
T cd08272 212 FDVVFDTVGGETLDASFEAVALYGRVVSILGGA--T--HDLAPLSFRNATYSGVFTLLPLLTGE--GRAHHGEILREAAR 285 (326)
T ss_pred CcEEEECCChHHHHHHHHHhccCCEEEEEecCC--c--cchhhHhhhcceEEEEEccccccccc--chhhHHHHHHHHHH
Confidence 999999999877667899999999999998553 1 22222336777777776432 1111 12445678899999
Q ss_pred HHHcCCCCCCcc-eeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 159 MMRTGKLAAPAH-KFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 159 ~~~~g~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
++.++.+.+.++ +.|++++++++|+.+. ++...+|+++++
T Consensus 286 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~vv~~~ 326 (326)
T cd08272 286 LVERGQLRPLLDPRTFPLEEAAAAHARLE--SGSARGKIVIDV 326 (326)
T ss_pred HHHCCCcccccccceecHHHHHHHHHHHH--cCCcccEEEEEC
Confidence 999999987655 8999999999999998 777788999864
No 97
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.82 E-value=1.6e-18 Score=134.37 Aligned_cols=186 Identities=18% Similarity=0.257 Sum_probs=140.4
Q ss_pred cccCCCC-----CCEEEEeCCCcHHHHHHHHHHHHCC-CcEEEEecCcccHHHHHHHHHhcCCceEeChh-HHHh-HHHh
Q psy2961 4 DYNSLSP-----GDVVIQNGANSACGQNVIQIARHWG-LKTINIVRNRDDIDKLKSYLKSLGADYVFTEE-ELRN-ISRD 75 (202)
Q Consensus 4 ~~~~~~~-----g~~VlI~g~~~~vG~~~i~la~~~g-~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~-~~~~-~~~~ 75 (202)
+.+++.+ |++|+|+|++|++|++++|+|+..| +++++++++++ +.+.++++|++.++++. ++.. +...
T Consensus 138 ~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~i~~~ 213 (336)
T cd08252 138 DRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPE----SIAWVKELGADHVINHHQDLAEQLEAL 213 (336)
T ss_pred HhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChh----hHHHHHhcCCcEEEeCCccHHHHHHhh
Confidence 3455666 9999999988899999999999999 99999887765 57888899998888754 4444 5533
Q ss_pred hCCCCCeEEEecCCCc-hHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhh-hcccHHHHHHHH
Q psy2961 76 ASIPKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQK-ENKESAERKSMM 153 (202)
Q Consensus 76 ~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~ 153 (202)
.+.++|+++|++|+. .....+++++++|+++.+|... ..++...+..++.++.+.....+.. ..+.+....+.+
T Consensus 214 -~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (336)
T cd08252 214 -GIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ---EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEIL 289 (336)
T ss_pred -CCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC---CcccchhhhcccceEEEEEeeccccccccchhhHHHHH
Confidence 345799999999964 5556899999999999998542 2344444446788888766543111 111112445778
Q ss_pred HHHHHHHHcCCCCCCcc---eeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 154 NELTEMMRTGKLAAPAH---KFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 154 ~~~~~~~~~g~~~~~~~---~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
.++.+++.+|.+.+.+. ..++++++++||+.+. ++...+|++++
T Consensus 290 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~vv~~ 336 (336)
T cd08252 290 NEVADLLDAGKLKTTLTETLGPINAENLREAHALLE--SGKTIGKIVLE 336 (336)
T ss_pred HHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHH--cCCccceEEeC
Confidence 99999999999987543 3479999999999999 77888899874
No 98
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.82 E-value=1.7e-18 Score=134.78 Aligned_cols=176 Identities=17% Similarity=0.267 Sum_probs=135.4
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCCCC
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPKP 81 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~~~ 81 (202)
.+++++|++|+|.|+ |++|++++|+|+..|++++.++++.++ +.+.++++|++.++++. ++.. +.+.+.+.++
T Consensus 163 ~~~~~~g~~vlI~g~-g~vg~~~~~lak~~G~~~v~~~~~~~~---~~~~~~~~ga~~v~~~~~~~~~~~i~~~~~~~~~ 238 (345)
T cd08287 163 SAGVRPGSTVVVVGD-GAVGLCAVLAAKRLGAERIIAMSRHED---RQALAREFGATDIVAERGEEAVARVRELTGGVGA 238 (345)
T ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH---HHHHHHHcCCceEecCCcccHHHHHHHhcCCCCC
Confidence 467889999999775 599999999999999975544544432 67888999999999764 3445 7777766789
Q ss_pred eEEEecCCCch-HHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHH
Q psy2961 82 KLALNCVGGNS-ATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMM 160 (202)
Q Consensus 82 d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (202)
|+++|++|++. ....+++++++|+++.++.... ...++....+.+++++.+... ...+.+.++++++
T Consensus 239 d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ 306 (345)
T cd08287 239 DAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG-GVELDVRELFFRNVGLAGGPA-----------PVRRYLPELLDDV 306 (345)
T ss_pred CEEEECCCCHHHHHHHHHhhccCCEEEEecccCC-CCccCHHHHHhcceEEEEecC-----------CcHHHHHHHHHHH
Confidence 99999998754 4558999999999999885542 333444355678888877432 2245789999999
Q ss_pred HcCCCCCC--cceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 161 RTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 161 ~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
.++.+.+. +.++++++++++|++.+. .... .|++|+
T Consensus 307 ~~~~l~~~~~~~~~~~l~~~~~a~~~~~--~~~~-~k~~~~ 344 (345)
T cd08287 307 LAGRINPGRVFDLTLPLDEVAEGYRAMD--ERRA-IKVLLR 344 (345)
T ss_pred HcCCCCHHHhEEeeecHHHHHHHHHHHh--CCCc-eEEEeC
Confidence 99999873 568899999999999987 6554 499985
No 99
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.82 E-value=1.9e-18 Score=134.16 Aligned_cols=179 Identities=26% Similarity=0.284 Sum_probs=132.5
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeCh--hHHHh-HHHhhCCCCCeE
Q psy2961 7 SLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTE--EELRN-ISRDASIPKPKL 83 (202)
Q Consensus 7 ~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~--~~~~~-~~~~~~~~~~d~ 83 (202)
+.+++++|+|+|+++++|++++++|+..|++++++++ ++ +.+.++++|++.++++ .++.+ +.+.++ .++|+
T Consensus 151 ~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~~-~~----~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~-~~~d~ 224 (339)
T cd08249 151 PASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTAS-PK----NFDLVKSLGADAVFDYHDPDVVEDIRAATG-GKLRY 224 (339)
T ss_pred CCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEEC-cc----cHHHHHhcCCCEEEECCCchHHHHHHHhcC-CCeeE
Confidence 4479999999999889999999999999999998874 44 5788889999888865 34555 766554 67999
Q ss_pred EEecCCC-chHHHHHHhccc--CcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhh-hcccHHHHHHHHHHHHHH
Q psy2961 84 ALNCVGG-NSATNLLRTLVS--KGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQK-ENKESAERKSMMNELTEM 159 (202)
Q Consensus 84 vid~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 159 (202)
++|++|+ ......++++++ +|+++.+|...... .+..+..+.......+.. ....+......++.+.++
T Consensus 225 vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (339)
T cd08249 225 ALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET-------EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPEL 297 (339)
T ss_pred EEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc-------cCCCCceEEEEEeeeecccccccccchHHHHHHHHHH
Confidence 9999998 566679999999 99999998554322 111222222222221110 000012335678889999
Q ss_pred HHcCCCCCCcceeec--hhhHHHHHHHHhhhcCC-CCceEEEee
Q psy2961 160 MRTGKLAAPAHKFVT--LKNFQEALMNTMSIQGK-SGVKYYIDF 200 (202)
Q Consensus 160 ~~~g~~~~~~~~~~~--~~~~~~a~~~~~~~~~~-~~gkvv~~~ 200 (202)
+.++++.+.+..+++ ++++++||+.+. .++ ..+|+|+++
T Consensus 298 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~kvvv~~ 339 (339)
T cd08249 298 LEEGKLKPHPVRVVEGGLEGVQEGLDLLR--KGKVSGEKLVVRL 339 (339)
T ss_pred HHcCCccCCCceecCCcHHHHHHHHHHHH--CCCccceEEEEeC
Confidence 999999987667788 999999999998 777 789999874
No 100
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=99.82 E-value=1.1e-18 Score=136.78 Aligned_cols=180 Identities=20% Similarity=0.277 Sum_probs=136.6
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASI 78 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~ 78 (202)
.+.+++.+|++|+|+|+ +++|++++++|+..|++ +++++++++ +.+.++++|+++++++. ++.. +.+.+.+
T Consensus 175 ~~~~~~~~g~~vLI~g~-g~vG~a~i~lak~~G~~~Vi~~~~~~~----~~~~~~~~g~~~vv~~~~~~~~~~l~~~~~~ 249 (363)
T cd08279 175 VNTARVRPGDTVAVIGC-GGVGLNAIQGARIAGASRIIAVDPVPE----KLELARRFGATHTVNASEDDAVEAVRDLTDG 249 (363)
T ss_pred HhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHH----HHHHHHHhCCeEEeCCCCccHHHHHHHHcCC
Confidence 45677899999999965 69999999999999997 777766665 57788889998888753 4555 7776666
Q ss_pred CCCeEEEecCCCc-hHHHHHHhcccCcEEEEEeccCC-CCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHH
Q psy2961 79 PKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSR-EPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNEL 156 (202)
Q Consensus 79 ~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 156 (202)
.++|+++|++++. .....+++++++|+++.++.... ....++...+..++..+.++.... ....+.++++
T Consensus 250 ~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 321 (363)
T cd08279 250 RGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGS--------ANPRRDIPRL 321 (363)
T ss_pred CCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecC--------cCcHHHHHHH
Confidence 7899999999954 45568999999999999985442 233445555555677777765422 1124668889
Q ss_pred HHHHHcCCCCCC--cceeechhhHHHHHHHHhhhcCCCCceEE
Q psy2961 157 TEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYY 197 (202)
Q Consensus 157 ~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~gkvv 197 (202)
++++.++.+.+. +.++|+++++++||+.+. +++..+.++
T Consensus 322 ~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~~~ 362 (363)
T cd08279 322 LDLYRAGRLKLDELVTRRYSLDEINEAFADML--AGENARGVI 362 (363)
T ss_pred HHHHHcCCCCcceeEEEEEcHHHHHHHHHHHh--cCCceeEEe
Confidence 999999999863 668899999999999998 766654443
No 101
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.82 E-value=1.1e-18 Score=135.57 Aligned_cols=175 Identities=19% Similarity=0.283 Sum_probs=132.0
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCCCCeE
Q psy2961 8 LSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPKPKL 83 (202)
Q Consensus 8 ~~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~~~d~ 83 (202)
..+|++|+|.|+ |++|++++|+|+.+|++ ++++.++++ +.+.++++|++.++++. ++.+ +.+.+.+.++|+
T Consensus 161 ~~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~~~~~----~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~d~ 235 (341)
T PRK05396 161 DLVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITDVNEY----RLELARKMGATRAVNVAKEDLRDVMAELGMTEGFDV 235 (341)
T ss_pred CCCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHH----HHHHHHHhCCcEEecCccccHHHHHHHhcCCCCCCE
Confidence 358999999876 59999999999999995 555543443 67888999999988753 4555 777776778999
Q ss_pred EEecCCCchH-HHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHc
Q psy2961 84 ALNCVGGNSA-TNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRT 162 (202)
Q Consensus 84 vid~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (202)
+|||+|+... ...+++++++|+++.+|.... ...++...+..+++++.++.... ..+.+..+.+++.+
T Consensus 236 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~~~----------~~~~~~~~~~~~~~ 304 (341)
T PRK05396 236 GLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPG-DMAIDWNKVIFKGLTIKGIYGRE----------MFETWYKMSALLQS 304 (341)
T ss_pred EEECCCCHHHHHHHHHHHhcCCEEEEEecCCC-CCcccHHHHhhcceEEEEEEccC----------ccchHHHHHHHHHc
Confidence 9999987554 558999999999999985442 23334455666777877764211 12335667788888
Q ss_pred C-CCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEeec
Q psy2961 163 G-KLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 201 (202)
Q Consensus 163 g-~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~~ 201 (202)
+ ++.+.+.++++++++++||+.+. .+. .||++++|+
T Consensus 305 ~~~~~~~~~~~~~l~~~~~a~~~~~--~~~-~gk~vv~~~ 341 (341)
T PRK05396 305 GLDLSPIITHRFPIDDFQKGFEAMR--SGQ-SGKVILDWD 341 (341)
T ss_pred CCChhHheEEEEeHHHHHHHHHHHh--cCC-CceEEEecC
Confidence 8 45555678999999999999998 666 799999875
No 102
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=99.82 E-value=1.6e-18 Score=135.87 Aligned_cols=178 Identities=17% Similarity=0.274 Sum_probs=134.2
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEec-CcccHHHHHHHHHhcCCceEeChh----HHHh-HHHhh
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVR-NRDDIDKLKSYLKSLGADYVFTEE----ELRN-ISRDA 76 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~-~~~~~~~~~~~~~~lg~~~v~~~~----~~~~-~~~~~ 76 (202)
.+.+++++|++|||+|+ |++|++++++|+..|+++++++. +++ +.+.++++|++.++++. ++.+ +.+.+
T Consensus 176 ~~~~~~~~g~~vlI~g~-g~vG~~a~~~a~~~G~~~v~~~~~~~~----~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~~ 250 (365)
T cd05279 176 VNTAKVTPGSTCAVFGL-GGVGLSVIMGCKAAGASRIIAVDINKD----KFEKAKQLGATECINPRDQDKPIVEVLTEMT 250 (365)
T ss_pred HhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHH----HHHHHHHhCCCeecccccccchHHHHHHHHh
Confidence 45678899999999976 59999999999999997555544 443 67888999999888743 4445 66666
Q ss_pred CCCCCeEEEecCCC-chHHHHHHhcc-cCcEEEEEeccC-CCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHH
Q psy2961 77 SIPKPKLALNCVGG-NSATNLLRTLV-SKGVMVTYGGMS-REPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMM 153 (202)
Q Consensus 77 ~~~~~d~vid~~g~-~~~~~~~~~l~-~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 153 (202)
+ .++|+++|++|. ......+++++ ++|+++.+|... .....++...+ .++.++.|.+...+. ..+.+
T Consensus 251 ~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~--------~~~~~ 320 (365)
T cd05279 251 D-GGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGGWK--------SKDSV 320 (365)
T ss_pred C-CCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccCCc--------hHhHH
Confidence 4 689999999986 44456899999 999999998543 22334444444 566778777554332 24568
Q ss_pred HHHHHHHHcCCCCCC--cceeechhhHHHHHHHHhhhcCCCCceEEE
Q psy2961 154 NELTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYI 198 (202)
Q Consensus 154 ~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~ 198 (202)
.++++++.++.+.+. ++++++++++++||+.+. +++. .|+++
T Consensus 321 ~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~--~~~~-~~~~~ 364 (365)
T cd05279 321 PKLVALYRQKKFPLDELITHVLPFEEINDGFDLMR--SGES-IRTIL 364 (365)
T ss_pred HHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHh--CCCc-eeeee
Confidence 889999999998863 678999999999999988 6554 46665
No 103
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=99.81 E-value=3.1e-18 Score=132.86 Aligned_cols=176 Identities=18% Similarity=0.319 Sum_probs=134.3
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHH-CCCcEEEEecCcccHHHHHHHHHhcCCceEeChh---HHHh-HHHhhCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARH-WGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE---ELRN-ISRDASI 78 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~-~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~---~~~~-~~~~~~~ 78 (202)
+.+++++|++|+|+|+ |++|++++++|+. .|+++++++++++ +++.++++|++.++++. ++.. +++.++
T Consensus 156 ~~~~~~~g~~vlV~g~-g~vG~~~~~la~~~~g~~v~~~~~~~~----~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~- 229 (338)
T PRK09422 156 KVSGIKPGQWIAIYGA-GGLGNLALQYAKNVFNAKVIAVDINDD----KLALAKEVGADLTINSKRVEDVAKIIQEKTG- 229 (338)
T ss_pred HhcCCCCCCEEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCChH----HHHHHHHcCCcEEecccccccHHHHHHHhcC-
Confidence 3567899999999995 6999999999998 5999999988876 68888999999888753 3444 666553
Q ss_pred CCCe-EEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHH
Q psy2961 79 PKPK-LALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELT 157 (202)
Q Consensus 79 ~~~d-~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 157 (202)
++| +++++.++......+++++++|+++.+|.... ...++...+..+..++.++.... .+.++++.
T Consensus 230 -~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 296 (338)
T PRK09422 230 -GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE-SMDLSIPRLVLDGIEVVGSLVGT-----------RQDLEEAF 296 (338)
T ss_pred -CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC-CceecHHHHhhcCcEEEEecCCC-----------HHHHHHHH
Confidence 688 55565665556668999999999999985432 23334444555677776654321 34578899
Q ss_pred HHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEeec
Q psy2961 158 EMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDFR 201 (202)
Q Consensus 158 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~~ 201 (202)
+++.+|.+.+.+ ..++++++++||+.+. ++...+|+++.+.
T Consensus 297 ~l~~~g~l~~~v-~~~~~~~~~~a~~~~~--~~~~~gkvvv~~~ 337 (338)
T PRK09422 297 QFGAEGKVVPKV-QLRPLEDINDIFDEME--QGKIQGRMVIDFT 337 (338)
T ss_pred HHHHhCCCCccE-EEEcHHHHHHHHHHHH--cCCccceEEEecC
Confidence 999999987654 4689999999999998 8888899998753
No 104
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=99.81 E-value=2.7e-18 Score=133.45 Aligned_cols=175 Identities=22% Similarity=0.366 Sum_probs=134.1
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCCCC
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIPKP 81 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~~~ 81 (202)
.++++|++|+|+|+ |++|++++|+|+..|++ +++++++++ +.+.++++|.+.++++. ++.. +.+.+.+.++
T Consensus 161 ~~~~~g~~VlV~g~-g~vg~~~~~la~~~g~~~v~~~~~s~~----~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~v 235 (343)
T cd08235 161 AGIKPGDTVLVIGA-GPIGLLHAMLAKASGARKVIVSDLNEF----RLEFAKKLGADYTIDAAEEDLVEKVRELTDGRGA 235 (343)
T ss_pred cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHH----HHHHHHHhCCcEEecCCccCHHHHHHHHhCCcCC
Confidence 47889999999975 59999999999999999 777766655 56777889998888753 4555 6666766789
Q ss_pred eEEEecCCCc-hHHHHHHhcccCcEEEEEeccCCCC-cCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHH
Q psy2961 82 KLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREP-VQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEM 159 (202)
Q Consensus 82 d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (202)
|+++||+++. .....+++++++|+++.++...... ..++...+..+++.+.++.... .+.+++++++
T Consensus 236 d~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~~~~~l 304 (343)
T cd08235 236 DVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAAS-----------PEDYKEALEL 304 (343)
T ss_pred CEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCC-----------hhhHHHHHHH
Confidence 9999999976 4556899999999999998543321 2233334455677776655321 3457788999
Q ss_pred HHcCCCCC--CcceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 160 MRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 160 ~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
++++.+.+ .+..+|+++++++|++.+. +++ .+|+|+.
T Consensus 305 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~~--~~~-~~k~vi~ 343 (343)
T cd08235 305 IASGKIDVKDLITHRFPLEDIEEAFELAA--DGK-SLKIVIT 343 (343)
T ss_pred HHcCCCChHHheeeEeeHHHHHHHHHHHh--CCC-cEEEEeC
Confidence 99999874 3567899999999999998 788 8899873
No 105
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.81 E-value=7e-18 Score=129.92 Aligned_cols=188 Identities=25% Similarity=0.364 Sum_probs=146.7
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIP 79 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~ 79 (202)
....++.++++|+|+|+++++|++++++++..|++++.++++.+ +.+.++++|.+.++++. ++.. +.+.+.+.
T Consensus 137 ~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 212 (328)
T cd08268 137 VELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSE----KRDALLALGAAHVIVTDEEDLVAEVLRITGGK 212 (328)
T ss_pred HHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHH----HHHHHHHcCCCEEEecCCccHHHHHHHHhCCC
Confidence 34567889999999999889999999999999999999887765 56777888887777643 3444 66666556
Q ss_pred CCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHH
Q psy2961 80 KPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEM 159 (202)
Q Consensus 80 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (202)
++|++++++++......+++++++|+++.+|........++....+.+++++.++...... . .+......+..+.++
T Consensus 213 ~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~ 289 (328)
T cd08268 213 GVDVVFDPVGGPQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEIT-L--DPEARRRAIAFILDG 289 (328)
T ss_pred CceEEEECCchHhHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEeccccc-C--CHHHHHHHHHHHHHH
Confidence 8999999999977777899999999999998554322233433356788888887654322 1 124556778888888
Q ss_pred HHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 160 MRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 160 ~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
+.++.+.+.....|++++++++++.+. .+...+|++++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~vv~~ 327 (328)
T cd08268 290 LASGALKPVVDRVFPFDDIVEAHRYLE--SGQQIGKIVVT 327 (328)
T ss_pred HHCCCCcCCcccEEcHHHHHHHHHHHH--cCCCCceEEEe
Confidence 889998887778999999999999998 77778899876
No 106
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=99.81 E-value=2.1e-18 Score=134.10 Aligned_cols=175 Identities=21% Similarity=0.254 Sum_probs=132.8
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHhcCCceEeC-hhHHHh-HHHhhCCCCCe
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFT-EEELRN-ISRDASIPKPK 82 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~v~~-~~~~~~-~~~~~~~~~~d 82 (202)
+++.+|++|+|+|+ |++|++++|+|+..|+ +++++.++++ +.+.++++|+..+.. ..++.. +.+.+.+.++|
T Consensus 163 ~~~~~~~~vlI~g~-g~vg~~~~~~a~~~g~~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~d 237 (344)
T cd08284 163 AQVRPGDTVAVIGC-GPVGLCAVLSAQVLGAARVFAVDPVPE----RLERAAALGAEPINFEDAEPVERVREATEGRGAD 237 (344)
T ss_pred cCCccCCEEEEECC-cHHHHHHHHHHHHcCCceEEEEcCCHH----HHHHHHHhCCeEEecCCcCHHHHHHHHhCCCCCC
Confidence 66789999999975 5999999999999997 6777754443 677888899763322 234555 77777777899
Q ss_pred EEEecCCCc-hHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHH
Q psy2961 83 LALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMR 161 (202)
Q Consensus 83 ~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (202)
++||++|+. .....+++++++|+++.+|.........+....+.+++++.+.. ....+.+.++++++.
T Consensus 238 vvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ 306 (344)
T cd08284 238 VVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGR-----------CPVRSLFPELLPLLE 306 (344)
T ss_pred EEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEec-----------CCcchhHHHHHHHHH
Confidence 999999975 44568999999999999996553333334445567777776542 112556888999999
Q ss_pred cCCCCCC--cceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 162 TGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 162 ~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
++.+.+. +.+++++++++++|+.+. .++. +|+|++
T Consensus 307 ~~~i~~~~~~~~~~~~~~~~~a~~~~~--~~~~-~k~Vi~ 343 (344)
T cd08284 307 SGRLDLEFLIDHRMPLEEAPEAYRLFD--KRKV-LKVVLD 343 (344)
T ss_pred cCCCChHHhEeeeecHHHHHHHHHHHh--cCCc-eEEEec
Confidence 9998863 568899999999999988 7666 899975
No 107
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.81 E-value=4e-18 Score=133.62 Aligned_cols=177 Identities=21% Similarity=0.309 Sum_probs=131.5
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeCh----hHHHh-HHHh--h
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTE----EELRN-ISRD--A 76 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~----~~~~~-~~~~--~ 76 (202)
...++.+|++|+|+|+ |++|++++|+|+..|++++.+++..+ ++.+.++++|++.++++ .++.. +... .
T Consensus 175 ~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
T PLN02702 175 RRANIGPETNVLVMGA-GPIGLVTMLAARAFGAPRIVIVDVDD---ERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKA 250 (364)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH---HHHHHHHHhCCCEEEecCcccccHHHHHHHHhhh
Confidence 3467889999999976 59999999999999998655555443 26788889999887642 24444 5443 2
Q ss_pred CCCCCeEEEecCCCc-hHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHH
Q psy2961 77 SIPKPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNE 155 (202)
Q Consensus 77 ~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 155 (202)
.+.++|++||++|+. .....+++++++|+++.+|.... ...++...+..+++++.+++.. ...++.
T Consensus 251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~------------~~~~~~ 317 (364)
T PLN02702 251 MGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHN-EMTVPLTPAAAREVDVVGVFRY------------RNTWPL 317 (364)
T ss_pred cCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC-CCcccHHHHHhCccEEEEeccC------------hHHHHH
Confidence 345799999999954 45568999999999999985433 2233444566778888886632 134678
Q ss_pred HHHHHHcCCCCC--Ccceeech--hhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 156 LTEMMRTGKLAA--PAHKFVTL--KNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 156 ~~~~~~~g~~~~--~~~~~~~~--~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
++++++++.+.+ .++++|++ +++++||+.+. .+...+|+|+.
T Consensus 318 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~--~~~~~~kvv~~ 363 (364)
T PLN02702 318 CLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSA--RGGNAIKVMFN 363 (364)
T ss_pred HHHHHHcCCCCchHheEEEeccChHHHHHHHHHHh--cCCCceEEEEe
Confidence 899999999863 35677555 89999999988 77778899985
No 108
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.81 E-value=3e-18 Score=132.29 Aligned_cols=166 Identities=24% Similarity=0.350 Sum_probs=128.1
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHh-HHHhhCCCCCeEE
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKLA 84 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~d~v 84 (202)
+++++|++|+|+|+.|++|++++++|+..|++++++++ .+.++++|+++++++.+... +.+.+ .++|++
T Consensus 158 ~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~--------~~~~~~~g~~~~~~~~~~~~~l~~~~--~~~d~v 227 (325)
T cd08264 158 AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR--------KDWLKEFGADEVVDYDEVEEKVKEIT--KMADVV 227 (325)
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH--------HHHHHHhCCCeeecchHHHHHHHHHh--CCCCEE
Confidence 67899999999999889999999999999999888762 35667899988888765545 66655 579999
Q ss_pred EecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHcCC
Q psy2961 85 LNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGK 164 (202)
Q Consensus 85 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 164 (202)
+|++|+......+++|+++|+++.+|........++...++.++.++.+...+. ++.+.++++++...
T Consensus 228 l~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~~- 295 (325)
T cd08264 228 INSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGT-----------RKELLELVKIAKDL- 295 (325)
T ss_pred EECCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCC-----------HHHHHHHHHHHHcC-
Confidence 999998766779999999999999986433233455555666677777754331 34577777777543
Q ss_pred CCCCcceeechhhHHHHHHHHhhhcCCCCceE
Q psy2961 165 LAAPAHKFVTLKNFQEALMNTMSIQGKSGVKY 196 (202)
Q Consensus 165 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkv 196 (202)
+..+.++|+++++++||+.+. .+...+|+
T Consensus 296 -~~~~~~~~~~~~~~~a~~~~~--~~~~~~kv 324 (325)
T cd08264 296 -KVKVWKTFKLEEAKEALKELF--SKERDGRI 324 (325)
T ss_pred -CceeEEEEcHHHHHHHHHHHH--cCCCcccc
Confidence 345678999999999999988 66666665
No 109
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.81 E-value=5.2e-18 Score=131.82 Aligned_cols=175 Identities=19% Similarity=0.233 Sum_probs=131.4
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcCCceEeCh--hHHHh-HHHhhCCCCCe
Q psy2961 7 SLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTE--EELRN-ISRDASIPKPK 82 (202)
Q Consensus 7 ~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~v~~~--~~~~~-~~~~~~~~~~d 82 (202)
.+++|++|+|.|+ +++|++++|+|+.+|++ ++++.+++ ++.+.++++|++.++++ .++.+ +.+.+++.++|
T Consensus 158 ~~~~g~~vlI~~~-g~vg~~a~~la~~~G~~~v~~~~~~~----~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d 232 (340)
T TIGR00692 158 GPISGKSVLVTGA-GPIGLMAIAVAKASGAYPVIVSDPNE----YRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVD 232 (340)
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCH----HHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCC
Confidence 4678999999775 59999999999999997 66663333 26778889999888865 34555 76766667899
Q ss_pred EEEecCCCch-HHHHHHhcccCcEEEEEeccCCCCcCCCcc-cccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHH
Q psy2961 83 LALNCVGGNS-ATNLLRTLVSKGVMVTYGGMSREPVQIPTS-AFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMM 160 (202)
Q Consensus 83 ~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (202)
+++||+|+.. ....+++|+++|+++.+|.... ...++.. .++.+++++.++... ...+.+.++.+++
T Consensus 233 ~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l 301 (340)
T TIGR00692 233 VFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPG-KVTIDFTNKVIFKGLTIYGITGR----------HMFETWYTVSRLI 301 (340)
T ss_pred EEEECCCCHHHHHHHHHhhcCCCEEEEEccCCC-CcccchhhhhhhcceEEEEEecC----------CchhhHHHHHHHH
Confidence 9999988654 4558999999999999985432 2222232 455567777665411 1134578899999
Q ss_pred HcCCCC--CCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 161 RTGKLA--APAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 161 ~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
.++++. +.+.+.+++++++++++.+. +++. ||+|++|
T Consensus 302 ~~~~l~~~~~~~~~~~l~~~~~a~~~~~--~~~~-gkvvv~~ 340 (340)
T TIGR00692 302 QSGKLDLDPIITHKFKFDKFEKGFELMR--SGQT-GKVILSL 340 (340)
T ss_pred HcCCCChHHheeeeeeHHHHHHHHHHHh--cCCC-ceEEEeC
Confidence 999997 34678999999999999998 7764 9999875
No 110
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.80 E-value=9.3e-18 Score=130.31 Aligned_cols=174 Identities=21% Similarity=0.315 Sum_probs=129.0
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhh-CCCCCe
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDA-SIPKPK 82 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~-~~~~~d 82 (202)
...+ +|++|||.|+ +++|++++|+|+.+|+ +++++.++++ +.+.++++|.+.++++.+.. +.+.. ...++|
T Consensus 161 ~~~~-~~~~VLI~g~-g~vG~~~~~lak~~G~~~v~~~~~s~~----~~~~~~~~g~~~vi~~~~~~-~~~~~~~~~~vd 233 (339)
T cd08232 161 AGDL-AGKRVLVTGA-GPIGALVVAAARRAGAAEIVATDLADA----PLAVARAMGADETVNLARDP-LAAYAADKGDFD 233 (339)
T ss_pred cCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHH----HHHHHHHcCCCEEEcCCchh-hhhhhccCCCcc
Confidence 3445 8999999886 5999999999999999 6777665554 56778889998888754311 21222 224699
Q ss_pred EEEecCCCc-hHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHH
Q psy2961 83 LALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMR 161 (202)
Q Consensus 83 ~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (202)
+++|++|+. .....+++|+++|+++.+|... .....+...++.+++++.+.... .+.++++++++.
T Consensus 234 ~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~ 300 (339)
T cd08232 234 VVFEASGAPAALASALRVVRPGGTVVQVGMLG-GPVPLPLNALVAKELDLRGSFRF------------DDEFAEAVRLLA 300 (339)
T ss_pred EEEECCCCHHHHHHHHHHHhcCCEEEEEecCC-CCccCcHHHHhhcceEEEEEecC------------HHHHHHHHHHHH
Confidence 999999864 4556899999999999998544 22233333345677777776521 235778889999
Q ss_pred cCCCCCC--cceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 162 TGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 162 ~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
+|.+++. +.++|+++++++|++.+. .+...+|+|+++
T Consensus 301 ~~~i~~~~~~~~~~~~~~~~~a~~~~~--~~~~~gkvvv~~ 339 (339)
T cd08232 301 AGRIDVRPLITAVFPLEEAAEAFALAA--DRTRSVKVQLSF 339 (339)
T ss_pred cCCCCchhheeEEecHHHHHHHHHHHH--hCCCceeEEEeC
Confidence 9998753 568899999999999998 777789999874
No 111
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=99.80 E-value=1e-17 Score=131.70 Aligned_cols=180 Identities=17% Similarity=0.255 Sum_probs=129.6
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHhcCCceEeChh----HHHh-HHHhh
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEE----ELRN-ISRDA 76 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~----~~~~-~~~~~ 76 (202)
.+.+++++|++|+|+|+ |++|++++++|+..|+ +|+++.++++ +++.++++|++.++++. +... +.+.+
T Consensus 183 ~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~----~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~ 257 (373)
T cd08299 183 VNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIAVDINKD----KFAKAKELGATECINPQDYKKPIQEVLTEMT 257 (373)
T ss_pred HhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHH----HHHHHHHcCCceEecccccchhHHHHHHHHh
Confidence 34577899999999976 5999999999999999 6877776654 68888999999888753 2445 66666
Q ss_pred CCCCCeEEEecCCCchH-HHHHHh-cccCcEEEEEeccCCC-CcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHH
Q psy2961 77 SIPKPKLALNCVGGNSA-TNLLRT-LVSKGVMVTYGGMSRE-PVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMM 153 (202)
Q Consensus 77 ~~~~~d~vid~~g~~~~-~~~~~~-l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 153 (202)
. .++|+++||+|++.. ...+.. ++++|+++.+|..... ...++.. .+.++.++.+++...+.. .+.+
T Consensus 258 ~-~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~--------~~~~ 327 (373)
T cd08299 258 D-GGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPM-LLLTGRTWKGAVFGGWKS--------KDSV 327 (373)
T ss_pred C-CCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHH-HHhcCCeEEEEEecCCcc--------HHHH
Confidence 5 579999999997554 444554 4679999999965432 2222222 234677888877654332 2335
Q ss_pred HHHHHHHHcCCCCC--CcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 154 NELTEMMRTGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 154 ~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
.++++.+.++.+.+ .++++|+++++++||+.+. +++. .|+++.+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~--~~~~-~k~~~~~ 373 (373)
T cd08299 328 PKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLR--SGKS-IRTVLTF 373 (373)
T ss_pred HHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHh--CCCc-ceEEEeC
Confidence 56666676665543 4678999999999999988 6554 5888764
No 112
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.79 E-value=7.3e-18 Score=132.65 Aligned_cols=176 Identities=18% Similarity=0.167 Sum_probs=129.5
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHhcCCceEeCh--hHHHh-HHHhhCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTE--EELRN-ISRDASIP 79 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~--~~~~~-~~~~~~~~ 79 (202)
..+++++|++|+|.|++ ++|++++|+|+..|+ +++++.++++ +.+.++++|+. .+++ .++.+ +.+.+. .
T Consensus 170 ~~~~~~~g~~vlI~g~g-~vg~~~~~~a~~~G~~~vi~~~~~~~----~~~~~~~~g~~-~v~~~~~~~~~~i~~~~~-~ 242 (375)
T cd08282 170 ELAGVQPGDTVAVFGAG-PVGLMAAYSAILRGASRVYVVDHVPE----RLDLAESIGAI-PIDFSDGDPVEQILGLEP-G 242 (375)
T ss_pred HhcCCCCCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCHH----HHHHHHHcCCe-EeccCcccHHHHHHHhhC-C
Confidence 45678899999998764 999999999999998 5777544443 67888999985 4554 24455 666665 5
Q ss_pred CCeEEEecCCCch------------HHHHHHhcccCcEEEEEeccCCCCc------------CCCcccccccCeeEEEEe
Q psy2961 80 KPKLALNCVGGNS------------ATNLLRTLVSKGVMVTYGGMSREPV------------QIPTSAFIFKDITLRGHW 135 (202)
Q Consensus 80 ~~d~vid~~g~~~------------~~~~~~~l~~~G~~v~~g~~~~~~~------------~~~~~~~~~~~~~~~g~~ 135 (202)
++|+++||+|++. +...+++++++|+++.+|....... .++...++.++..+.+..
T Consensus 243 ~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (375)
T cd08282 243 GVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQ 322 (375)
T ss_pred CCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEec
Confidence 7999999999874 4568999999999998875432211 122233444455544432
Q ss_pred chhHhhhcccHHHHHHHHHHHHHHHHcCCCCCC--cceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 136 MTRWQKENKESAERKSMMNELTEMMRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
. ...+.+..+++++.++++.+. +.++++++++++||+.+. ++. .+|+|+++
T Consensus 323 ~-----------~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~--~~~-~~kvvv~~ 375 (375)
T cd08282 323 A-----------PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFD--KRL-ETKVVIKP 375 (375)
T ss_pred C-----------CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHh--cCC-ceEEEeCC
Confidence 1 124568888999999999874 789999999999999998 777 88999863
No 113
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.79 E-value=8.7e-18 Score=130.67 Aligned_cols=181 Identities=17% Similarity=0.197 Sum_probs=135.7
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcCCceEeChhH-HHh-HHHhhCCCCC
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEEE-LRN-ISRDASIPKP 81 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~-~~~-~~~~~~~~~~ 81 (202)
..++++|++|+|+|+ +.+|++++|+|+.+|++ +++++++++ +.+.++++|++.++++.+ ... +.....+.++
T Consensus 154 ~~~~~~~~~vlI~g~-g~~g~~~~~lA~~~G~~~v~~~~~~~~----~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 228 (343)
T cd08236 154 LAGITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDE----KLAVARELGADDTINPKEEDVEKVRELTEGRGA 228 (343)
T ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHH----HHHHHHHcCCCEEecCccccHHHHHHHhCCCCC
Confidence 566889999999975 69999999999999998 777776654 577888899988887532 144 6667766789
Q ss_pred eEEEecCCCch-HHHHHHhcccCcEEEEEeccCCCC--cCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHH
Q psy2961 82 KLALNCVGGNS-ATNLLRTLVSKGVMVTYGGMSREP--VQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTE 158 (202)
Q Consensus 82 d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (202)
|+++||+|+.. ....+++|+++|+++.+|...... ...+...++.++.++.++....... ...+.++++.+
T Consensus 229 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 302 (343)
T cd08236 229 DLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAP------FPGDEWRTALD 302 (343)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccc------cchhhHHHHHH
Confidence 99999998654 456899999999999998554321 1112233457788888876532111 12456788899
Q ss_pred HHHcCCCC--CCcceeechhhHHHHHHHHhhhc-CCCCceEEE
Q psy2961 159 MMRTGKLA--APAHKFVTLKNFQEALMNTMSIQ-GKSGVKYYI 198 (202)
Q Consensus 159 ~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~-~~~~gkvv~ 198 (202)
++.++.+. +.+..++++++++++++.+. + ....+|+|+
T Consensus 303 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~k~v~ 343 (343)
T cd08236 303 LLASGKIKVEPLITHRLPLEDGPAAFERLA--DREEFSGKVLL 343 (343)
T ss_pred HHHcCCCChHHheeeeecHHHHHHHHHHHH--cCCCCeeEEeC
Confidence 99999986 34568899999999999998 7 666788875
No 114
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.79 E-value=1.3e-17 Score=129.10 Aligned_cols=175 Identities=17% Similarity=0.243 Sum_probs=130.0
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcCCceEeChhHHHh-HHHhhCCCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKP 81 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~ 81 (202)
+.+++++|++|+|+|+ +.+|.+++++|+..|++ ++++.++++ +.+.++++|.+.++++.+... ....+.+.++
T Consensus 153 ~~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v 227 (334)
T cd08234 153 DLLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAEPNEE----KLELAKKLGATETVDPSREDPEAQKEDNPYGF 227 (334)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHH----HHHHHHHhCCeEEecCCCCCHHHHHHhcCCCC
Confidence 4577899999999975 59999999999999998 566665554 577888899887776532211 1133445679
Q ss_pred eEEEecCCCch-HHHHHHhcccCcEEEEEeccCC-CCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHH
Q psy2961 82 KLALNCVGGNS-ATNLLRTLVSKGVMVTYGGMSR-EPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEM 159 (202)
Q Consensus 82 d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (202)
|+++||+|... ....+++++++|+++.+|.... ....+....++.+++++.+.... ...++++.++
T Consensus 228 d~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~ 295 (334)
T cd08234 228 DVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN------------PYTFPRAIAL 295 (334)
T ss_pred cEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC------------HHHHHHHHHH
Confidence 99999998654 4558999999999999986543 12233333334467777776532 3347888899
Q ss_pred HHcCCCCCC--cceeechhhHHHHHHHHhhhcCCCCceEEE
Q psy2961 160 MRTGKLAAP--AHKFVTLKNFQEALMNTMSIQGKSGVKYYI 198 (202)
Q Consensus 160 ~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~ 198 (202)
+.++++.+. +..+++++++++|++.+. . ...+|+|+
T Consensus 296 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~~--~-~~~~k~vi 333 (334)
T cd08234 296 LESGKIDVKGLVSHRLPLEEVPEALEGMR--S-GGALKVVV 333 (334)
T ss_pred HHcCCCChhhhEEEEecHHHHHHHHHHHh--c-CCceEEEe
Confidence 999998753 568899999999999999 7 67889886
No 115
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.79 E-value=3.3e-17 Score=126.19 Aligned_cols=187 Identities=21% Similarity=0.293 Sum_probs=138.5
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIP 79 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~ 79 (202)
.+.+++.+|++|+|+|+++++|++++++++..|++++.++ +++ +.+.+.++|++.+++.. ++.. +.+.+.+.
T Consensus 134 ~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 208 (325)
T cd08271 134 FKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKR----NFEYVKSLGADHVIDYNDEDVCERIKEITGGR 208 (325)
T ss_pred HHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHH----HHHHHHHcCCcEEecCCCccHHHHHHHHcCCC
Confidence 3457788999999999988999999999999999988876 433 56777889998888643 3445 66666667
Q ss_pred CCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcc--cHHHHHHHHHHHH
Q psy2961 80 KPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENK--ESAERKSMMNELT 157 (202)
Q Consensus 80 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~ 157 (202)
++|++++++++......+++++++|+++.++...... . ...+..++.+....+.......+ .+....+.+.++.
T Consensus 209 ~~d~vi~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (325)
T cd08271 209 GVDAVLDTVGGETAAALAPTLAFNGHLVCIQGRPDAS---P-DPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELL 284 (325)
T ss_pred CCcEEEECCCcHhHHHHHHhhccCCEEEEEcCCCCCc---c-hhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHH
Confidence 8999999999887777899999999999987443221 1 11223344444333222111111 1134567788899
Q ss_pred HHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 158 EMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 158 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
+++.++.+.+...+.++++++.++++.+. .+...+|+++++
T Consensus 285 ~~~~~~~i~~~~~~~~~~~~~~~a~~~~~--~~~~~~kiv~~~ 325 (325)
T cd08271 285 ELLAAGKLEPLVIEVLPFEQLPEALRALK--DRHTRGKIVVTI 325 (325)
T ss_pred HHHHCCCeeeccceEEcHHHHHHHHHHHH--cCCccceEEEEC
Confidence 99999999877778999999999999998 777788998863
No 116
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.78 E-value=3.8e-17 Score=126.34 Aligned_cols=184 Identities=20% Similarity=0.213 Sum_probs=131.6
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCe
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPK 82 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d 82 (202)
.+.+++.+|++|+|+|+++++|++++++|+..|++++.+++ ++ +.+.++++|+..+ ++...........++++|
T Consensus 132 ~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~----~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~d 205 (331)
T cd08273 132 HRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ER----NHAALRELGATPI-DYRTKDWLPAMLTPGGVD 205 (331)
T ss_pred HHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HH----HHHHHHHcCCeEE-cCCCcchhhhhccCCCce
Confidence 34567899999999999889999999999999999988886 43 5778888987543 322111111122235799
Q ss_pred EEEecCCCchHHHHHHhcccCcEEEEEeccCCCCc-CCCc--------------ccccccCeeEEEEechhHhhhcccHH
Q psy2961 83 LALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPV-QIPT--------------SAFIFKDITLRGHWMTRWQKENKESA 147 (202)
Q Consensus 83 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~--------------~~~~~~~~~~~g~~~~~~~~~~~~~~ 147 (202)
+++||+|+......+++++++|+++.+|....... .... .....+..++..... +.. ..+.
T Consensus 206 ~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~p~ 281 (331)
T cd08273 206 VVFDGVGGESYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWR--DRA--EDPK 281 (331)
T ss_pred EEEECCchHHHHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeech--hcc--cCHH
Confidence 99999999887778999999999999985543221 1111 011222333333332 211 1224
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEE
Q psy2961 148 ERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 198 (202)
Q Consensus 148 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~ 198 (202)
...+.+.++++++.+|.+.+.+.+++++++++++|+.+. ++...+|+|+
T Consensus 282 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~--~~~~~gkvv~ 330 (331)
T cd08273 282 LFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLE--SGKVVGKIVL 330 (331)
T ss_pred HHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHH--cCCCcceEEe
Confidence 556789999999999999887788999999999999998 7777888885
No 117
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.78 E-value=1.2e-17 Score=126.11 Aligned_cols=181 Identities=18% Similarity=0.224 Sum_probs=129.1
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcC-CceEeChhHHHhHHHhhCCCCCe
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLG-ADYVFTEEELRNISRDASIPKPK 82 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg-~~~v~~~~~~~~~~~~~~~~~~d 82 (202)
.+++++|++|+|+|+ |++|++++++|+..|++ +++++++++ +.+.++++| ++.++...+ ..+.+.++|
T Consensus 92 ~~~~~~g~~vlI~g~-g~vg~~~i~~a~~~g~~~vi~~~~~~~----~~~~~~~~g~~~~~~~~~~-----~~~~~~~~d 161 (277)
T cd08255 92 DAEPRLGERVAVVGL-GLVGLLAAQLAKAAGAREVVGVDPDAA----RRELAEALGPADPVAADTA-----DEIGGRGAD 161 (277)
T ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEECCCHH----HHHHHHHcCCCccccccch-----hhhcCCCCC
Confidence 567899999999986 59999999999999998 888776665 577888888 455443321 112346799
Q ss_pred EEEecCCCch-HHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccH-HHHHHHHHHHHHHH
Q psy2961 83 LALNCVGGNS-ATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKES-AERKSMMNELTEMM 160 (202)
Q Consensus 83 ~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 160 (202)
++||+++... ....+++++++|+++.+|..... .......+..+.+++.+.....+....+.+ ....+.++++.+++
T Consensus 162 ~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (277)
T cd08255 162 VVIEASGSPSALETALRLLRDRGRVVLVGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLL 240 (277)
T ss_pred EEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHH
Confidence 9999988644 45689999999999999865433 111112233456677776654332211100 11235689999999
Q ss_pred HcCCCCCCcceeechhhHHHHHHHHhhhcC-CCCceEEE
Q psy2961 161 RTGKLAAPAHKFVTLKNFQEALMNTMSIQG-KSGVKYYI 198 (202)
Q Consensus 161 ~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~gkvv~ 198 (202)
.++.+.+.+.+.++++++++||+.+. .+ ....|+++
T Consensus 241 ~~~~l~~~~~~~~~~~~~~~a~~~~~--~~~~~~~k~~~ 277 (277)
T cd08255 241 AEGRLEALITHRVPFEDAPEAYRLLF--EDPPECLKVVL 277 (277)
T ss_pred HcCCccccccCccCHHHHHHHHHHHH--cCCccceeeeC
Confidence 99999887788999999999999998 44 55678764
No 118
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.78 E-value=2.5e-17 Score=128.00 Aligned_cols=174 Identities=21% Similarity=0.257 Sum_probs=129.0
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHhHHHhhCCCCCeE
Q psy2961 7 SLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRNISRDASIPKPKL 83 (202)
Q Consensus 7 ~~~~g~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~~~~~~~~~~~d~ 83 (202)
..++|++|+|.|+ +++|++++|+|+..|+ +++++.++++ +.+.++++|+++++++. ++..+.+.+.+.++|+
T Consensus 160 ~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~vd~ 234 (341)
T cd05281 160 GDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASDPNPY----RLELAKKMGADVVINPREEDVVEVKSVTDGTGVDV 234 (341)
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHH----HHHHHHHhCcceeeCcccccHHHHHHHcCCCCCCE
Confidence 3478999999876 5999999999999999 5777644443 67888899998888642 2213555566678999
Q ss_pred EEecCCCch-HHHHHHhcccCcEEEEEeccCCCCcCCCc-ccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHH
Q psy2961 84 ALNCVGGNS-ATNLLRTLVSKGVMVTYGGMSREPVQIPT-SAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMR 161 (202)
Q Consensus 84 vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (202)
+|||+|+.. ....+++|+++|+++.+|.... ....+. ..+..+++.+.++... ...+.+.++.+++.
T Consensus 235 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~ 303 (341)
T cd05281 235 VLEMSGNPKAIEQGLKALTPGGRVSILGLPPG-PVDIDLNNLVIFKGLTVQGITGR----------KMFETWYQVSALLK 303 (341)
T ss_pred EEECCCCHHHHHHHHHHhccCCEEEEEccCCC-CcccccchhhhccceEEEEEecC----------CcchhHHHHHHHHH
Confidence 999998754 4568999999999999985433 222222 2255567777765521 11345778889999
Q ss_pred cCCCCC--CcceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 162 TGKLAA--PAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 162 ~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
+|.+.+ .+...++++++++||+.+. .++ .+|+|++
T Consensus 304 ~~~l~~~~~~~~~~~~~~~~~a~~~~~--~~~-~gk~vv~ 340 (341)
T cd05281 304 SGKVDLSPVITHKLPLEDFEEAFELMR--SGK-CGKVVLY 340 (341)
T ss_pred cCCCChhHheEEEecHHHHHHHHHHHh--cCC-CceEEec
Confidence 999874 3567899999999999998 778 8999986
No 119
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.76 E-value=1.5e-16 Score=123.07 Aligned_cols=188 Identities=16% Similarity=0.240 Sum_probs=138.1
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIP 79 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~ 79 (202)
.+.+++++|++|+|+|+++++|++++++|+.. . ++.++...+ +++.+.++.+|.+.++++. ++.. +...+. .
T Consensus 131 ~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~-~-~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~ 205 (337)
T cd08275 131 FELGNLRPGQSVLVHSAAGGVGLAAGQLCKTV-P-NVTVVGTAS--ASKHEALKENGVTHVIDYRTQDYVEEVKKISP-E 205 (337)
T ss_pred HHhhCCCCCCEEEEEcCcchHHHHHHHHHHHc-c-CcEEEEeCC--HHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhC-C
Confidence 44677899999999999889999999999998 2 233332221 1256778889988877643 4555 666654 6
Q ss_pred CCeEEEecCCCchHHHHHHhcccCcEEEEEeccCCCCc----------------CCCcccccccCeeEEEEechhHhhhc
Q psy2961 80 KPKLALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPV----------------QIPTSAFIFKDITLRGHWMTRWQKEN 143 (202)
Q Consensus 80 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~----------------~~~~~~~~~~~~~~~g~~~~~~~~~~ 143 (202)
++|+++||+|+......+++++++|+++.+|....... .+.....+.+++++.++.........
T Consensus 206 ~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (337)
T cd08275 206 GVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEER 285 (337)
T ss_pred CceEEEECCcHHHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhCh
Confidence 79999999998877778999999999999985442111 11113446778888888754322211
Q ss_pred ccHHHHHHHHHHHHHHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 144 KESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
......+.++.+++.++.+.+.....|++++++++++.+. .+...+|+++++
T Consensus 286 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~kvv~~~ 337 (337)
T cd08275 286 ---ELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQ--SRKNIGKVVLTP 337 (337)
T ss_pred ---HHHHHHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHH--cCCCcceEEEeC
Confidence 2234568889999999999887778999999999999998 777788999863
No 120
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.76 E-value=3.2e-17 Score=127.93 Aligned_cols=185 Identities=20% Similarity=0.298 Sum_probs=125.0
Q ss_pred ccc-CCCCCCEEEEeCCCcHHHHHHHHHHHHCC-C-cEEEEecCcccHHHHHHHHHhcCCceEeChh--H---H-Hh-HH
Q psy2961 4 DYN-SLSPGDVVIQNGANSACGQNVIQIARHWG-L-KTINIVRNRDDIDKLKSYLKSLGADYVFTEE--E---L-RN-IS 73 (202)
Q Consensus 4 ~~~-~~~~g~~VlI~g~~~~vG~~~i~la~~~g-~-~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~---~-~~-~~ 73 (202)
+.+ ++++|++|+|+|+++++|++++|+|+..| . .++++. +++ +.+.++++|++.++++. + + .. +.
T Consensus 144 ~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~----~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~ 218 (352)
T cd08247 144 DLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSR----SAELNKKLGADHFIDYDAHSGVKLLKPVLE 218 (352)
T ss_pred HhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-Chh----HHHHHHHhCCCEEEecCCCcccchHHHHHH
Confidence 344 68899999999999999999999999874 4 455554 443 34577889998888743 2 3 33 33
Q ss_pred HhhCCCCCeEEEecCCCc-hHHHHHHhcc---cCcEEEEEeccCCCCcCC-C--------c-ccccccCeeEEEEechhH
Q psy2961 74 RDASIPKPKLALNCVGGN-SATNLLRTLV---SKGVMVTYGGMSREPVQI-P--------T-SAFIFKDITLRGHWMTRW 139 (202)
Q Consensus 74 ~~~~~~~~d~vid~~g~~-~~~~~~~~l~---~~G~~v~~g~~~~~~~~~-~--------~-~~~~~~~~~~~g~~~~~~ 139 (202)
..+.+.++|++|||+|+. .....+++++ ++|+++.++......... . . ...+.++.++........
T Consensus 219 ~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (352)
T cd08247 219 NVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFF 298 (352)
T ss_pred hhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEE
Confidence 334357899999999984 4456889999 999999875332211100 0 0 001112222221111100
Q ss_pred hhhcccHHHHHHHHHHHHHHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEee
Q psy2961 140 QKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYIDF 200 (202)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~~ 200 (202)
. ..+ . .+.+..+.+++.++.+.+.+.++++++++++||+.+. +++..+|+++++
T Consensus 299 ~-~~~--~--~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~--~~~~~gkvvi~~ 352 (352)
T cd08247 299 L-LDP--N--ADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLK--SNRAKGKVVIKV 352 (352)
T ss_pred E-ecC--C--HHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHH--cCCCCCcEEEeC
Confidence 0 011 1 2567888899999999887788999999999999998 888889999864
No 121
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.76 E-value=2e-17 Score=128.90 Aligned_cols=180 Identities=22% Similarity=0.282 Sum_probs=123.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHhHHHhhCCCCCeEEEec
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRNISRDASIPKPKLALNC 87 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~~~~~~~~~~~d~vid~ 87 (202)
+|++|+|+|++|++|++++++|+..|+++++++++ + +.+.++++|.+.+++.. ++.. ......++|++||+
T Consensus 162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~----~~~~~~~~g~~~~~~~~~~~~~~--~l~~~~~vd~vi~~ 234 (350)
T cd08248 162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-D----AIPLVKSLGADDVIDYNNEDFEE--ELTERGKFDVILDT 234 (350)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-c----hHHHHHHhCCceEEECCChhHHH--HHHhcCCCCEEEEC
Confidence 49999999998899999999999999998887754 3 46788889988887643 3333 22233679999999
Q ss_pred CCCchHHHHHHhcccCcEEEEEeccCCCCc---CCCcccccccCeeEEEEechhHhhhcc----cHHHHHHHHHHHHHHH
Q psy2961 88 VGGNSATNLLRTLVSKGVMVTYGGMSREPV---QIPTSAFIFKDITLRGHWMTRWQKENK----ESAERKSMMNELTEMM 160 (202)
Q Consensus 88 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 160 (202)
+|++.....+++++++|+++.+|....... .+.... +....++............. ......+.+.++++++
T Consensus 235 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (350)
T cd08248 235 VGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGM-LKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLV 313 (350)
T ss_pred CChHHHHHHHHHhccCCEEEEecCCcccccccccccchh-hhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHH
Confidence 998876779999999999999985432111 010000 01111110000000000000 0011246688999999
Q ss_pred HcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEEe
Q psy2961 161 RTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYID 199 (202)
Q Consensus 161 ~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~~ 199 (202)
.+|.+.+.+++.|+++++++||+.+. ++...+|++++
T Consensus 314 ~~g~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~vv~~ 350 (350)
T cd08248 314 EDGKIKPVIDKVFPFEEVPEAYEKVE--SGHARGKTVIK 350 (350)
T ss_pred hCCCEecccceeecHHHHHHHHHHHh--cCCCceEEEeC
Confidence 99999887889999999999999998 77777888863
No 122
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.76 E-value=9.9e-17 Score=124.08 Aligned_cols=172 Identities=22% Similarity=0.276 Sum_probs=130.9
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEE
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLAL 85 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vi 85 (202)
.+++++++|+|+|++ ++|++++++|+..|+++++++++++ +.+.++++|++.++++.+...... .. .++|+++
T Consensus 158 ~~~~~~~~vlI~g~g-~iG~~~~~~a~~~G~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~-~~-~~~d~vi 230 (330)
T cd08245 158 AGPRPGERVAVLGIG-GLGHLAVQYARAMGFETVAITRSPD----KRELARKLGADEVVDSGAELDEQA-AA-GGADVIL 230 (330)
T ss_pred hCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHhCCcEEeccCCcchHHh-cc-CCCCEEE
Confidence 578899999999876 6999999999999999999887776 578888899888876432211222 22 4799999
Q ss_pred ecCCCch-HHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHcCC
Q psy2961 86 NCVGGNS-ATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGK 164 (202)
Q Consensus 86 d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 164 (202)
|+++... ....+++++++|+++.++.............++.++.++.++.... ...++.+++++.++.
T Consensus 231 ~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ll~~~~ 299 (330)
T cd08245 231 VTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGG-----------RADLQEALDFAAEGK 299 (330)
T ss_pred ECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCC-----------HHHHHHHHHHHHcCC
Confidence 9987644 4558999999999999985433322222334556777777776432 345788889999999
Q ss_pred CCCCcceeechhhHHHHHHHHhhhcCCCCceEEE
Q psy2961 165 LAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 198 (202)
Q Consensus 165 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~ 198 (202)
+.+ ..+.++++++++||+.+. ++...+|+|+
T Consensus 300 l~~-~~~~~~~~~~~~a~~~~~--~~~~~~~~v~ 330 (330)
T cd08245 300 VKP-MIETFPLDQANEAYERME--KGDVRFRFVL 330 (330)
T ss_pred Ccc-eEEEEcHHHHHHHHHHHH--cCCCCcceeC
Confidence 886 457899999999999998 8888888875
No 123
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.75 E-value=8.2e-17 Score=124.49 Aligned_cols=168 Identities=18% Similarity=0.183 Sum_probs=125.7
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeE
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKL 83 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~ 83 (202)
+.+++++|++|+|+|++ ++|++++++++..|+++++++++++ +++.++++|++.+++.... .+.++|+
T Consensus 161 ~~~~~~~~~~vlV~g~g-~vg~~~~~la~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~-------~~~~vD~ 228 (329)
T cd08298 161 KLAGLKPGQRLGLYGFG-ASAHLALQIARYQGAEVFAFTRSGE----HQELARELGADWAGDSDDL-------PPEPLDA 228 (329)
T ss_pred HhhCCCCCCEEEEECCc-HHHHHHHHHHHHCCCeEEEEcCChH----HHHHHHHhCCcEEeccCcc-------CCCcccE
Confidence 56788999999999865 9999999999999999998887775 6788888999877764321 2357999
Q ss_pred EEecCCCc-hHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHc
Q psy2961 84 ALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRT 162 (202)
Q Consensus 84 vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (202)
++++++.. .....+++++++|+++.+|........++... +.++..+.+.... ..+.+..+++++++
T Consensus 229 vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~-----------~~~~~~~~~~l~~~ 296 (329)
T cd08298 229 AIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANL-----------TRQDGEEFLKLAAE 296 (329)
T ss_pred EEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEEecCC-----------CHHHHHHHHHHHHc
Confidence 99986544 44558999999999998873221111122222 3345555554421 13457888899999
Q ss_pred CCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEE
Q psy2961 163 GKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 198 (202)
Q Consensus 163 g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~ 198 (202)
+.+.+. .++|+++++++||+.+. .+...+|+|+
T Consensus 297 ~~l~~~-~~~~~~~~~~~a~~~~~--~~~~~~~~v~ 329 (329)
T cd08298 297 IPIKPE-VETYPLEEANEALQDLK--EGRIRGAAVL 329 (329)
T ss_pred CCCCce-EEEEeHHHHHHHHHHHH--cCCCcceeeC
Confidence 998874 68999999999999999 8888888874
No 124
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.74 E-value=1.1e-16 Score=122.17 Aligned_cols=172 Identities=23% Similarity=0.295 Sum_probs=130.0
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeE
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKL 83 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~ 83 (202)
+...+.+|++|+|+|+++++|++++++++..|++++++++++ +.+.++++|.+.+++..+..... ...+.++|+
T Consensus 138 ~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~d~ 211 (309)
T cd05289 138 ELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-----NADFLRSLGADEVIDYTKGDFER-AAAPGGVDA 211 (309)
T ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-----hHHHHHHcCCCEEEeCCCCchhh-ccCCCCceE
Confidence 345688999999999988999999999999999998887654 35677888887777543211111 334467999
Q ss_pred EEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHcC
Q psy2961 84 ALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTG 163 (202)
Q Consensus 84 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 163 (202)
++|++++......+++++++|+++.+|...... . ..+.++.++....... . .+.+.++.++++++
T Consensus 212 v~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~-~----~~~~~~~~~~~~~~~~--------~--~~~~~~~~~~~~~~ 276 (309)
T cd05289 212 VLDTVGGETLARSLALVKPGGRLVSIAGPPPAE-Q----AAKRRGVRAGFVFVEP--------D--GEQLAELAELVEAG 276 (309)
T ss_pred EEECCchHHHHHHHHHHhcCcEEEEEcCCCcch-h----hhhhccceEEEEEecc--------c--HHHHHHHHHHHHCC
Confidence 999999987777999999999999998543311 1 2334566666554321 1 45688899999999
Q ss_pred CCCCCcceeechhhHHHHHHHHhhhcCCCCceEEE
Q psy2961 164 KLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 198 (202)
Q Consensus 164 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~ 198 (202)
.+.+.+++.|++++++++|+.+. .+...+|+++
T Consensus 277 ~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~kvv~ 309 (309)
T cd05289 277 KLRPVVDRVFPLEDAAEAHERLE--SGHARGKVVL 309 (309)
T ss_pred CEEEeeccEEcHHHHHHHHHHHH--hCCCCCcEeC
Confidence 98877788999999999999998 6666778774
No 125
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.72 E-value=4.7e-16 Score=119.49 Aligned_cols=178 Identities=22% Similarity=0.256 Sum_probs=123.5
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeE
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKL 83 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~ 83 (202)
+..++++|++|+|+|++|++|++++++|+..|+++++++++ + +.+.++++|.+.+++..........+.+.++|+
T Consensus 137 ~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~ 211 (319)
T cd08267 137 DAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-R----NAELVRSLGADEVIDYTTEDFVALTAGGEKYDV 211 (319)
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-H----HHHHHHHcCCCEeecCCCCCcchhccCCCCCcE
Confidence 44568899999999998899999999999999999888754 3 578888999888776432100122344567999
Q ss_pred EEecCCCchH--HHHHHhcccCcEEEEEeccCCCCcCCC---cccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHH
Q psy2961 84 ALNCVGGNSA--TNLLRTLVSKGVMVTYGGMSREPVQIP---TSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTE 158 (202)
Q Consensus 84 vid~~g~~~~--~~~~~~l~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (202)
++||+|+... ...+..++++|+++.+|.......... ..........+...... .. .+.+.++.+
T Consensus 212 vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~ 281 (319)
T cd08267 212 IFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAK---------PN-AEDLEQLAE 281 (319)
T ss_pred EEECCCchHHHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEEEec---------CC-HHHHHHHHH
Confidence 9999985432 223344999999999985443211111 00111111222222211 01 556888999
Q ss_pred HHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEE
Q psy2961 159 MMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 198 (202)
Q Consensus 159 ~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~ 198 (202)
++.++.+.+.+.++|+++++++||+.+. ++...+|+++
T Consensus 282 ~l~~~~~~~~~~~~~~~~~i~~a~~~~~--~~~~~~~vvv 319 (319)
T cd08267 282 LVEEGKLKPVIDSVYPLEDAPEAYRRLK--SGRARGKVVI 319 (319)
T ss_pred HHHCCCeeeeeeeEEcHHHHHHHHHHHh--cCCCCCcEeC
Confidence 9999999877788999999999999998 7777778774
No 126
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.69 E-value=1.3e-15 Score=116.73 Aligned_cols=146 Identities=21% Similarity=0.322 Sum_probs=111.9
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeCh--hHHHh-HHHhhCCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTE--EELRN-ISRDASIP 79 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~--~~~~~-~~~~~~~~ 79 (202)
...+++++|++|+|.| ++++|++++|+|+..|+++++++.+.+ .++.+.++++|++.+ ++ .++.. +.....+.
T Consensus 157 ~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~--~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~ 232 (306)
T cd08258 157 AERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKD--EVRLDVAKELGADAV-NGGEEDLAELVNEITDGD 232 (306)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCC--HHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCCC
Confidence 3456788999999977 569999999999999999877644332 235678888999877 64 35555 66666667
Q ss_pred CCeEEEecCCCc-hHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHHHHHH
Q psy2961 80 KPKLALNCVGGN-SATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMNELTE 158 (202)
Q Consensus 80 ~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (202)
++|+++|++|+. .....+++|+++|+++.+|........++...++.+++++.|+++++ .++++++++
T Consensus 233 ~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~-----------~~~~~~~~~ 301 (306)
T cd08258 233 GADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSST-----------PASWETALR 301 (306)
T ss_pred CCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCc-----------hHhHHHHHH
Confidence 899999999764 44558999999999999997653344556667778999999998754 345888888
Q ss_pred HHHcC
Q psy2961 159 MMRTG 163 (202)
Q Consensus 159 ~~~~g 163 (202)
++++|
T Consensus 302 ~~~~~ 306 (306)
T cd08258 302 LLASG 306 (306)
T ss_pred HHhcC
Confidence 88765
No 127
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.69 E-value=2.2e-17 Score=110.55 Aligned_cols=124 Identities=27% Similarity=0.373 Sum_probs=79.0
Q ss_pred cCCceEeChhHHHhHHHhhCCCCCeEEEecCC--CchH-HHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEE
Q psy2961 58 LGADYVFTEEELRNISRDASIPKPKLALNCVG--GNSA-TNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGH 134 (202)
Q Consensus 58 lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~ 134 (202)
||+++++||.+.. . ....++|+||||+| ++.+ ..++++| ++|+++.++. .........+...+...
T Consensus 1 LGAd~vidy~~~~-~---~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~------~~~~~~~~~~~~~~~~~ 69 (127)
T PF13602_consen 1 LGADEVIDYRDTD-F---AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG------DLPSFARRLKGRSIRYS 69 (127)
T ss_dssp CT-SEEEETTCSH-H---HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S------HHHHHHHHHHCHHCEEE
T ss_pred CCcCEEecCCCcc-c---cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC------cccchhhhhcccceEEE
Confidence 6899999875211 3 44578999999999 5555 3466788 9999999884 11111111222333333
Q ss_pred echhHhhhcccHHHHHHHHHHHHHHHHcCCCCCCcceeechhhHHHHHHHHhhhcCCCCceEEE
Q psy2961 135 WMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTMSIQGKSGVKYYI 198 (202)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~gkvv~ 198 (202)
....... . ....+.++++.+++++|+++|.+.++||++++++|++.+. +++..||+||
T Consensus 70 ~~~~~~~---~-~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~--~~~~~GKvVl 127 (127)
T PF13602_consen 70 FLFSVDP---N-AIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLE--SGHARGKVVL 127 (127)
T ss_dssp CCC-H-----H-HHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHH--CT--SSEEEE
T ss_pred EEEecCC---C-chHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHH--hCCCCCeEeC
Confidence 3221000 0 2246779999999999999999999999999999999999 9999999997
No 128
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.60 E-value=9e-14 Score=111.65 Aligned_cols=146 Identities=13% Similarity=0.162 Sum_probs=102.2
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE-eChh---------------HH
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEE---------------EL 69 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~~~~---------------~~ 69 (202)
++..++++|+|+|+| ++|+++++.|+.+|++|+++..+++ +++.++++|++.+ ++.. ++
T Consensus 160 aG~~pg~kVlViGaG-~iGL~Ai~~Ak~lGA~V~a~D~~~~----rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~ 234 (509)
T PRK09424 160 AGKVPPAKVLVIGAG-VAGLAAIGAAGSLGAIVRAFDTRPE----VAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEF 234 (509)
T ss_pred cCCcCCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHcCCeEEEeccccccccccchhhhcchhH
Confidence 345789999999999 9999999999999998777766654 7899999999855 4321 22
Q ss_pred Hh-HHHhhCC--CCCeEEEecCCCch-----H--HHHHHhcccCcEEEEEeccCCCC--cCCCcccccc-cCeeEEEEec
Q psy2961 70 RN-ISRDASI--PKPKLALNCVGGNS-----A--TNLLRTLVSKGVMVTYGGMSREP--VQIPTSAFIF-KDITLRGHWM 136 (202)
Q Consensus 70 ~~-~~~~~~~--~~~d~vid~~g~~~-----~--~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~-~~~~~~g~~~ 136 (202)
.+ ..+.+.. .++|++|+|++.+. + .+.++.++++|++++++...+.+ ...+...++. +++++.|++.
T Consensus 235 ~~~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n 314 (509)
T PRK09424 235 IKAEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD 314 (509)
T ss_pred HHHHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCC
Confidence 22 2222111 57999999999642 3 55899999999999999654443 3444455665 8999999763
Q ss_pred hhHhhhcccHHHHHHHHHHHHHHHHcCCCCC
Q psy2961 137 TRWQKENKESAERKSMMNELTEMMRTGKLAA 167 (202)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 167 (202)
.. .+...+..+++.++.++.
T Consensus 315 ~P-----------~~~p~~As~lla~~~i~l 334 (509)
T PRK09424 315 LP-----------SRLPTQSSQLYGTNLVNL 334 (509)
T ss_pred Cc-----------hhHHHHHHHHHHhCCccH
Confidence 21 122334666666666543
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.60 E-value=3.2e-14 Score=111.56 Aligned_cols=164 Identities=12% Similarity=0.114 Sum_probs=123.3
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEec
Q psy2961 8 LSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNC 87 (202)
Q Consensus 8 ~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~ 87 (202)
..+|++|+|.|+| ++|+.+++.++.+|++|+++..++. +.+.++.+|++.+ +.++. + .++|+||+|
T Consensus 199 ~l~GktVvViG~G-~IG~~va~~ak~~Ga~ViV~d~d~~----R~~~A~~~G~~~~-~~~e~--v------~~aDVVI~a 264 (413)
T cd00401 199 MIAGKVAVVAGYG-DVGKGCAQSLRGQGARVIVTEVDPI----CALQAAMEGYEVM-TMEEA--V------KEGDIFVTT 264 (413)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECChh----hHHHHHhcCCEEc-cHHHH--H------cCCCEEEEC
Confidence 4689999999999 9999999999999998777554443 6788888998543 22111 2 367999999
Q ss_pred CCCchHHH--HHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHH--HHHHHHHcC
Q psy2961 88 VGGNSATN--LLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMN--ELTEMMRTG 163 (202)
Q Consensus 88 ~g~~~~~~--~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g 163 (202)
+|.+.... .+..++++|.++.+|.. +..++...+..+++++.++..+.. .-.++ ..++++.+|
T Consensus 265 tG~~~~i~~~~l~~mk~GgilvnvG~~---~~eId~~~L~~~el~i~g~~~~~~----------~~~~~~g~aI~LLa~G 331 (413)
T cd00401 265 TGNKDIITGEHFEQMKDGAIVCNIGHF---DVEIDVKGLKENAVEVVNIKPQVD----------RYELPDGRRIILLAEG 331 (413)
T ss_pred CCCHHHHHHHHHhcCCCCcEEEEeCCC---CCccCHHHHHhhccEEEEccCCcc----------eEEcCCcchhhhhhCc
Confidence 99887654 48999999999999843 346777778888899888775421 00244 678999999
Q ss_pred CC-C--CCccee-----echh-hHHHHHHHHhhhcCCC-CceEEEee
Q psy2961 164 KL-A--APAHKF-----VTLK-NFQEALMNTMSIQGKS-GVKYYIDF 200 (202)
Q Consensus 164 ~~-~--~~~~~~-----~~~~-~~~~a~~~~~~~~~~~-~gkvv~~~ 200 (202)
++ + +.+++. ++++ ++.+++..+. ++.. ..|+++.+
T Consensus 332 rlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~--~~~~~~~kV~~~p 376 (413)
T cd00401 332 RLVNLGCATGHPSFVMSNSFTNQVLAQIELWT--NRDKYEVGVYFLP 376 (413)
T ss_pred CCCCCcccCCCccceechhHHHHHHHHHHHHh--cCCcCCCcEEECC
Confidence 88 3 346677 8899 9999999998 5443 35777654
No 130
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.59 E-value=3.9e-14 Score=106.29 Aligned_cols=130 Identities=28% Similarity=0.384 Sum_probs=100.7
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChh--HHHh-HHHhhCCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEE--ELRN-ISRDASIP 79 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~--~~~~-~~~~~~~~ 79 (202)
.+...+.+|++|+|+|+++ +|++++++++..|.++++++++++ +.+.++++|++.++++. +... +. ...+.
T Consensus 127 ~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~ 200 (271)
T cd05188 127 RRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDE----KLELAKELGADHVIDYKEEDLEEELR-LTGGG 200 (271)
T ss_pred HhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHH----HHHHHHHhCCceeccCCcCCHHHHHH-HhcCC
Confidence 3445568999999999997 999999999999999988887765 57888889988887643 3333 44 45557
Q ss_pred CCeEEEecCCC-chHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechh
Q psy2961 80 KPKLALNCVGG-NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTR 138 (202)
Q Consensus 80 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 138 (202)
++|+++|++++ ......+++++++|+++.++..............+.+++++.++....
T Consensus 201 ~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (271)
T cd05188 201 GADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGT 260 (271)
T ss_pred CCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCCCCcccHHHHHhcceEEEEeecCC
Confidence 89999999998 556668999999999999986654332222445678899999988654
No 131
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=99.00 E-value=3.5e-08 Score=79.68 Aligned_cols=123 Identities=15% Similarity=0.192 Sum_probs=84.8
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-Ch---------------hHHHh
Q psy2961 8 LSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-TE---------------EELRN 71 (202)
Q Consensus 8 ~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~~---------------~~~~~ 71 (202)
..++++|+|+|+| .+|++++++++.+|+.|+++..+.+ +++.++++|++.+. +. +++.+
T Consensus 161 ~vp~akVlViGaG-~iGl~Aa~~ak~lGA~V~v~d~~~~----rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~ 235 (511)
T TIGR00561 161 KVPPAKVLVIGAG-VAGLAAIGAANSLGAIVRAFDTRPE----VKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIA 235 (511)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHcCCeEEeccccccccccccceeecCHHHHH
Confidence 3467999999998 9999999999999999877776665 68888889987633 21 12222
Q ss_pred -HHHhhC--CCCCeEEEecC---CCch----HHHHHHhcccCcEEEEEeccCCCCcCCCc-ccccc--cCeeEEEEe
Q psy2961 72 -ISRDAS--IPKPKLALNCV---GGNS----ATNLLRTLVSKGVMVTYGGMSREPVQIPT-SAFIF--KDITLRGHW 135 (202)
Q Consensus 72 -~~~~~~--~~~~d~vid~~---g~~~----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~--~~~~~~g~~ 135 (202)
..+.+. ..++|++|+|+ |.+. +.+.++.|++|+.+|+++...+.+..... .+.+. .++.+.+..
T Consensus 236 ~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E~t~p~~~~~~~~GV~~~gv~ 312 (511)
T TIGR00561 236 AEMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCEYTKPGEVYTTENQVKVIGYT 312 (511)
T ss_pred HHHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEEEecCceEEEecCCEEEEeeC
Confidence 222222 25799999999 5433 34478999999999999866655432221 12222 347777755
No 132
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.74 E-value=8.7e-07 Score=69.67 Aligned_cols=150 Identities=17% Similarity=0.124 Sum_probs=87.9
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHH-hcCCceEeChhHHHhHHHhhCCCCCeEEEecCC
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK-SLGADYVFTEEELRNISRDASIPKPKLALNCVG 89 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~g 89 (202)
+.+|+|.|+| .+|+.+++.++.+|++|+++.++++ +.+.+. .++........+...+.+.. ..+|++|+|++
T Consensus 167 ~~~VlViGaG-~vG~~aa~~a~~lGa~V~v~d~~~~----~~~~l~~~~g~~v~~~~~~~~~l~~~l--~~aDvVI~a~~ 239 (370)
T TIGR00518 167 PGDVTIIGGG-VVGTNAAKMANGLGATVTILDINID----RLRQLDAEFGGRIHTRYSNAYEIEDAV--KRADLLIGAVL 239 (370)
T ss_pred CceEEEEcCC-HHHHHHHHHHHHCCCeEEEEECCHH----HHHHHHHhcCceeEeccCCHHHHHHHH--ccCCEEEEccc
Confidence 3458899997 9999999999999998777665544 445553 44543222221111133322 46899999983
Q ss_pred ---C--ch--HHHHHHhcccCcEEEEEeccCCCCcCCC------cccccccCeeEEEEe-chhHhhhcccHHHHHHHHHH
Q psy2961 90 ---G--NS--ATNLLRTLVSKGVMVTYGGMSREPVQIP------TSAFIFKDITLRGHW-MTRWQKENKESAERKSMMNE 155 (202)
Q Consensus 90 ---~--~~--~~~~~~~l~~~G~~v~~g~~~~~~~~~~------~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~ 155 (202)
. +. ....++.+++++.++.++...+...... .+.....++.+.+.. +.+..............+..
T Consensus 240 ~~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~~e~~~~t~~d~p~~~~~Gv~~~~v~nlP~~~p~~aS~~~~~~l~~~ 319 (370)
T TIGR00518 240 IPGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGCVETSRPTTHDQPTYAVHDVVHYCVANMPGAVPKTSTYALTNATMPY 319 (370)
T ss_pred cCCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCCccCCcCCCCCCCEEEECCeEEEEeCCcccccHHHHHHHHHHHHHHH
Confidence 2 22 2347788999999999986655433221 112333456666652 33322222221233455666
Q ss_pred HHHHHHcCCCCC
Q psy2961 156 LTEMMRTGKLAA 167 (202)
Q Consensus 156 ~~~~~~~g~~~~ 167 (202)
+..+..+|.+.+
T Consensus 320 l~~~~~~g~~~~ 331 (370)
T TIGR00518 320 VLELANHGWRAA 331 (370)
T ss_pred HHHHHhcccccc
Confidence 667776675554
No 133
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.67 E-value=1.7e-06 Score=66.02 Aligned_cols=94 Identities=14% Similarity=0.197 Sum_probs=71.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 89 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~g 89 (202)
.+.+|+|+|.| .+|..+++.++.+|++|+++.++.+ +.+.++++|.+.+ ...++.+ .. .++|+||+|++
T Consensus 151 ~g~kvlViG~G-~iG~~~a~~L~~~Ga~V~v~~r~~~----~~~~~~~~G~~~~-~~~~l~~---~l--~~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGFG-RTGMTLARTLKALGANVTVGARKSA----HLARITEMGLSPF-HLSELAE---EV--GKIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHcCCeee-cHHHHHH---Hh--CCCCEEEECCC
Confidence 68999999998 8999999999999998888777654 4677778887643 3333332 22 46899999987
Q ss_pred CchHH-HHHHhcccCcEEEEEeccCC
Q psy2961 90 GNSAT-NLLRTLVSKGVMVTYGGMSR 114 (202)
Q Consensus 90 ~~~~~-~~~~~l~~~G~~v~~g~~~~ 114 (202)
..... ..++.+++++.++.++..++
T Consensus 220 ~~~i~~~~l~~~~~g~vIIDla~~pg 245 (296)
T PRK08306 220 ALVLTKEVLSKMPPEALIIDLASKPG 245 (296)
T ss_pred hhhhhHHHHHcCCCCcEEEEEccCCC
Confidence 65443 36788999999999886554
No 134
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.67 E-value=5e-07 Score=68.27 Aligned_cols=173 Identities=16% Similarity=0.181 Sum_probs=93.5
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC--cEEEEecCcccHHHHHHHHHhcCCceEeC-hhHHHhHHHhhCCCCC
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGL--KTINIVRNRDDIDKLKSYLKSLGADYVFT-EEELRNISRDASIPKP 81 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~--~vi~~~~~~~~~~~~~~~~~~lg~~~v~~-~~~~~~~~~~~~~~~~ 81 (202)
.+.+++|++||.+|+|+ |..++++++..|. +++++..+++..+...+.....+.+.+.. ..+..++. .....+
T Consensus 72 ~~~~~~g~~VLDiG~G~--G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~--~~~~~f 147 (272)
T PRK11873 72 LAELKPGETVLDLGSGG--GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALP--VADNSV 147 (272)
T ss_pred hccCCCCCEEEEeCCCC--CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCC--CCCCce
Confidence 35678999999999984 7777888887775 47777666653222222223344432211 12222211 123579
Q ss_pred eEEEecCC-----C--chHHHHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEEechhHhhhcccHHHHHHHHH
Q psy2961 82 KLALNCVG-----G--NSATNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGHWMTRWQKENKESAERKSMMN 154 (202)
Q Consensus 82 d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 154 (202)
|+|+.... . ..+..+.++|+|||+++..+...... + ...+.+...+.+...... ....
T Consensus 148 D~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~--~--~~~~~~~~~~~~~~~~~~-----------~~~~ 212 (272)
T PRK11873 148 DVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGE--L--PEEIRNDAELYAGCVAGA-----------LQEE 212 (272)
T ss_pred eEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCC--C--CHHHHHhHHHHhccccCC-----------CCHH
Confidence 99885431 1 12345889999999999876443221 1 112222222221111100 0133
Q ss_pred HHHHHHHcCCCCC---CcceeechhhHHHHHHHH--hhhcCCCCceEEE
Q psy2961 155 ELTEMMRTGKLAA---PAHKFVTLKNFQEALMNT--MSIQGKSGVKYYI 198 (202)
Q Consensus 155 ~~~~~~~~g~~~~---~~~~~~~~~~~~~a~~~~--~~~~~~~~gkvv~ 198 (202)
++.+++.+-.+.. .....++++++.++++.+ . .+...++.+.
T Consensus 213 e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~ 259 (272)
T PRK11873 213 EYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIA--PGRQLDGYIV 259 (272)
T ss_pred HHHHHHHHCCCCceEEEeccceecccHHHHHHHhccc--cccccCceEE
Confidence 4555666533443 234567888999999888 5 4444445443
No 135
>KOG1205|consensus
Probab=98.55 E-value=2.3e-06 Score=64.12 Aligned_cols=106 Identities=20% Similarity=0.338 Sum_probs=73.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce-Ee----C---hhHHHh-HHHhh-CCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF----T---EEELRN-ISRDA-SIP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-v~----~---~~~~~~-~~~~~-~~~ 79 (202)
.|..|+|+||++|+|.+.+.-....|++++.++++.+.+++-.+.+++++... ++ | .++... +.+.. .-+
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999998876544446666666544 33 2 233333 32221 236
Q ss_pred CCeEEEecCCCc--------------------------hHHHHHHhccc-C-cEEEEEeccCCC
Q psy2961 80 KPKLALNCVGGN--------------------------SATNLLRTLVS-K-GVMVTYGGMSRE 115 (202)
Q Consensus 80 ~~d~vid~~g~~--------------------------~~~~~~~~l~~-~-G~~v~~g~~~~~ 115 (202)
++|+.++.+|-. .+..++..|+. + |++|.+++..+.
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~ 154 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK 154 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence 899999988831 11224555543 3 999999877764
No 136
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.54 E-value=1.4e-06 Score=69.22 Aligned_cols=91 Identities=16% Similarity=0.219 Sum_probs=67.8
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCV 88 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~ 88 (202)
-+|++|+|.|.| .+|..+++.++.+|++|+++...+. +...+...|+. +.+ ..+ .. .++|++|+++
T Consensus 210 l~Gk~VlViG~G-~IG~~vA~~lr~~Ga~ViV~d~dp~----ra~~A~~~G~~-v~~---l~e---al--~~aDVVI~aT 275 (425)
T PRK05476 210 IAGKVVVVAGYG-DVGKGCAQRLRGLGARVIVTEVDPI----CALQAAMDGFR-VMT---MEE---AA--ELGDIFVTAT 275 (425)
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHhCCCEEEEEcCCch----hhHHHHhcCCE-ecC---HHH---HH--hCCCEEEECC
Confidence 389999999998 9999999999999998777665553 33444445654 332 222 11 3689999999
Q ss_pred CCchHHH--HHHhcccCcEEEEEeccC
Q psy2961 89 GGNSATN--LLRTLVSKGVMVTYGGMS 113 (202)
Q Consensus 89 g~~~~~~--~~~~l~~~G~~v~~g~~~ 113 (202)
|...... .+..+++++.++.+|...
T Consensus 276 G~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 276 GNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred CCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 9876543 688999999999998554
No 137
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.52 E-value=3.5e-06 Score=62.16 Aligned_cols=104 Identities=25% Similarity=0.260 Sum_probs=65.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe--C---hhHHHh-HHHhhC-CCCCe
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF--T---EEELRN-ISRDAS-IPKPK 82 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~--~---~~~~~~-~~~~~~-~~~~d 82 (202)
++++|+|+|++|++|..+++.+...|++|+.++++++...+..+.+...+.-..+ | ++.... +.+... -.++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999999999999999988775322111222222322222 2 233333 332211 14689
Q ss_pred EEEecCCCch------------------------HHHHHHhcccCcEEEEEeccC
Q psy2961 83 LALNCVGGNS------------------------ATNLLRTLVSKGVMVTYGGMS 113 (202)
Q Consensus 83 ~vid~~g~~~------------------------~~~~~~~l~~~G~~v~~g~~~ 113 (202)
.++.+.+... ...+++.++.+|+++.++...
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 9998887421 112345667789999988654
No 138
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.51 E-value=1.5e-06 Score=68.55 Aligned_cols=91 Identities=19% Similarity=0.237 Sum_probs=68.5
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEec
Q psy2961 8 LSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNC 87 (202)
Q Consensus 8 ~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~ 87 (202)
..+|++|+|.|.| .+|..+++.++.+|++|+++...+. +...+...|+. +.+.++. + .+.|++|++
T Consensus 192 ~l~Gk~VvViG~G-~IG~~vA~~ak~~Ga~ViV~d~dp~----r~~~A~~~G~~-v~~leea--l------~~aDVVIta 257 (406)
T TIGR00936 192 LIAGKTVVVAGYG-WCGKGIAMRARGMGARVIVTEVDPI----RALEAAMDGFR-VMTMEEA--A------KIGDIFITA 257 (406)
T ss_pred CCCcCEEEEECCC-HHHHHHHHHHhhCcCEEEEEeCChh----hHHHHHhcCCE-eCCHHHH--H------hcCCEEEEC
Confidence 4689999999999 9999999999999999888665553 34445555663 3322111 2 357999999
Q ss_pred CCCchHHH--HHHhcccCcEEEEEecc
Q psy2961 88 VGGNSATN--LLRTLVSKGVMVTYGGM 112 (202)
Q Consensus 88 ~g~~~~~~--~~~~l~~~G~~v~~g~~ 112 (202)
+|...... .+..+++++.++.+|..
T Consensus 258 TG~~~vI~~~~~~~mK~GailiN~G~~ 284 (406)
T TIGR00936 258 TGNKDVIRGEHFENMKDGAIVANIGHF 284 (406)
T ss_pred CCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence 99887643 78899999999998854
No 139
>PLN02494 adenosylhomocysteinase
Probab=98.43 E-value=2.8e-06 Score=67.86 Aligned_cols=89 Identities=13% Similarity=0.225 Sum_probs=68.5
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHh-HHHhhCCCCCeEEEec
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKLALNC 87 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~d~vid~ 87 (202)
-.|++|+|.|.| .+|..+++.++.+|++|+++...+. +...+...|...+ + ..+ + ...|++++|
T Consensus 252 LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~----r~~eA~~~G~~vv-~---leEal------~~ADVVI~t 316 (477)
T PLN02494 252 IAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPI----CALQALMEGYQVL-T---LEDVV------SEADIFVTT 316 (477)
T ss_pred cCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCch----hhHHHHhcCCeec-c---HHHHH------hhCCEEEEC
Confidence 579999999999 9999999999999998777665543 3345555666532 2 222 2 357999999
Q ss_pred CCCchH--HHHHHhcccCcEEEEEecc
Q psy2961 88 VGGNSA--TNLLRTLVSKGVMVTYGGM 112 (202)
Q Consensus 88 ~g~~~~--~~~~~~l~~~G~~v~~g~~ 112 (202)
+|.... ...+..|++++.++.+|..
T Consensus 317 TGt~~vI~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 317 TGNKDIIMVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred CCCccchHHHHHhcCCCCCEEEEcCCC
Confidence 998765 3489999999999999853
No 140
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.39 E-value=3e-06 Score=61.62 Aligned_cols=77 Identities=19% Similarity=0.263 Sum_probs=56.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcCC--c--eEe---ChhHHHh-HHHhhCC-C
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGA--D--YVF---TEEELRN-ISRDASI-P 79 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~--~--~v~---~~~~~~~-~~~~~~~-~ 79 (202)
.++.++|+||+||+|.++++.+...|++|+.+.++.+ +++.+ .+++. . ..+ |+.+... +...... +
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~d----rL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREE----RLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFG 80 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHH----HHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence 4578999999999999999999999999999999987 44444 45662 1 122 3444444 4443332 4
Q ss_pred CCeEEEecCCC
Q psy2961 80 KPKLALNCVGG 90 (202)
Q Consensus 80 ~~d~vid~~g~ 90 (202)
.+|++++.+|-
T Consensus 81 ~iDiLvNNAGl 91 (246)
T COG4221 81 RIDILVNNAGL 91 (246)
T ss_pred cccEEEecCCC
Confidence 69999999984
No 141
>PRK12742 oxidoreductase; Provisional
Probab=98.37 E-value=1.4e-05 Score=58.86 Aligned_cols=99 Identities=13% Similarity=0.159 Sum_probs=63.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHH-HHhcCCceEe-Ch---hHHHh-HHHhhCCCCCeE
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSY-LKSLGADYVF-TE---EELRN-ISRDASIPKPKL 83 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~-~~~lg~~~v~-~~---~~~~~-~~~~~~~~~~d~ 83 (202)
.+++|||+|++|++|..+++.+...|++++.+.++..+ +.+. ..+++...+. |- ..+.+ +.+ .+++|+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~---~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~---~~~id~ 78 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKD---AAERLAQETGATAVQTDSADRDAVIDVVRK---SGALDI 78 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHH---HHHHHHHHhCCeEEecCCCCHHHHHHHHHH---hCCCcE
Confidence 47899999999999999999999999998877654321 2223 3445554332 32 22333 322 246899
Q ss_pred EEecCCCchH--------------------------HHHHHhcccCcEEEEEeccCC
Q psy2961 84 ALNCVGGNSA--------------------------TNLLRTLVSKGVMVTYGGMSR 114 (202)
Q Consensus 84 vid~~g~~~~--------------------------~~~~~~l~~~G~~v~~g~~~~ 114 (202)
+|+++|.... ..++..++..|+++.++....
T Consensus 79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 135 (237)
T PRK12742 79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG 135 (237)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 9999874210 112344566789999886544
No 142
>PRK07109 short chain dehydrogenase; Provisional
Probab=98.35 E-value=1.2e-05 Score=62.67 Aligned_cols=81 Identities=16% Similarity=0.262 Sum_probs=55.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.+|+|+|+++++|..+++.+...|++|+.++++++..++..+.+++.|.+... | +++... +..... -+++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 4679999999999999999999999999999888776543334445555654322 3 333333 322211 1479
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|+++|.
T Consensus 87 D~lInnAg~ 95 (334)
T PRK07109 87 DTWVNNAMV 95 (334)
T ss_pred CEEEECCCc
Confidence 999999874
No 143
>PRK06139 short chain dehydrogenase; Provisional
Probab=98.33 E-value=5.5e-06 Score=64.36 Aligned_cols=81 Identities=22% Similarity=0.354 Sum_probs=56.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+++|||+|+++++|.++++.+...|++|+.+.++++..++..+.+++.|.+..+ | .++... +.+... .+++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 5689999999999999999999999999999888776544334455556654322 2 233333 222211 2569
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|+++|.
T Consensus 86 D~lVnnAG~ 94 (330)
T PRK06139 86 DVWVNNVGV 94 (330)
T ss_pred CEEEECCCc
Confidence 999999973
No 144
>PRK08339 short chain dehydrogenase; Provisional
Probab=98.32 E-value=1.7e-05 Score=59.67 Aligned_cols=81 Identities=21% Similarity=0.386 Sum_probs=53.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhc-CCce-Ee--C---hhHHHh-HHHhhCCCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL-GADY-VF--T---EEELRN-ISRDASIPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~l-g~~~-v~--~---~~~~~~-~~~~~~~~~~ 81 (202)
.|.++||+|+++++|.++++.+...|++|+.+.++.+..++..+.+++. +... .+ | +.+... +.+...-+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 4789999999999999999999999999998887765433222333222 3221 11 2 334444 4333222569
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|+++.+.|.
T Consensus 87 D~lv~nag~ 95 (263)
T PRK08339 87 DIFFFSTGG 95 (263)
T ss_pred cEEEECCCC
Confidence 999998874
No 145
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.32 E-value=9.1e-06 Score=60.48 Aligned_cols=83 Identities=20% Similarity=0.300 Sum_probs=57.7
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHh-cCCce-Ee--C---hhHHHhHHHhhC--C
Q psy2961 8 LSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADY-VF--T---EEELRNISRDAS--I 78 (202)
Q Consensus 8 ~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~-lg~~~-v~--~---~~~~~~~~~~~~--~ 78 (202)
...+.+++|+||++|+|...+..+...|++++.++|+.+.+.+..+.++. .|... ++ | +++...+..... +
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 35678999999999999999999999999999999999864444444433 23322 22 3 233333333222 2
Q ss_pred CCCeEEEecCCC
Q psy2961 79 PKPKLALNCVGG 90 (202)
Q Consensus 79 ~~~d~vid~~g~ 90 (202)
..+|+.|+++|-
T Consensus 83 ~~IdvLVNNAG~ 94 (265)
T COG0300 83 GPIDVLVNNAGF 94 (265)
T ss_pred CcccEEEECCCc
Confidence 479999999984
No 146
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.28 E-value=1.9e-05 Score=59.75 Aligned_cols=76 Identities=12% Similarity=0.121 Sum_probs=53.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-C---hhHHHh-HHHhhC--CCCCe
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-T---EEELRN-ISRDAS--IPKPK 82 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~---~~~~~~-~~~~~~--~~~~d 82 (202)
.+.+|+|+|++|++|..+++.+...|++|+.++++++ +.+.+.+.+.+.+. | ..+... +.+... ++.+|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~----~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id 78 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEE----DVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLD 78 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence 4679999999999999999999889999999888765 34555555554332 3 233333 333211 24799
Q ss_pred EEEecCC
Q psy2961 83 LALNCVG 89 (202)
Q Consensus 83 ~vid~~g 89 (202)
++|.++|
T Consensus 79 ~li~~Ag 85 (277)
T PRK05993 79 ALFNNGA 85 (277)
T ss_pred EEEECCC
Confidence 9999886
No 147
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.25 E-value=4.8e-06 Score=59.42 Aligned_cols=104 Identities=21% Similarity=0.263 Sum_probs=73.3
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeC-hhHHHhHHHhhCCCCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFT-EEELRNISRDASIPKP 81 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~-~~~~~~~~~~~~~~~~ 81 (202)
.+...+++|++||-.|+| .|..++-+|+..| +|+.+-+-++-.....+.++.+|...|.. ..|-.. -......|
T Consensus 65 ~~~L~~~~g~~VLEIGtG--sGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~--G~~~~aPy 139 (209)
T COG2518 65 LQLLELKPGDRVLEIGTG--SGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSK--GWPEEAPY 139 (209)
T ss_pred HHHhCCCCCCeEEEECCC--chHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCccc--CCCCCCCc
Confidence 456778999999999997 5999999999988 77777666543222345567788754431 112111 11112679
Q ss_pred eEEEecCCCchHHH-HHHhcccCcEEEEEec
Q psy2961 82 KLALNCVGGNSATN-LLRTLVSKGVMVTYGG 111 (202)
Q Consensus 82 d~vid~~g~~~~~~-~~~~l~~~G~~v~~g~ 111 (202)
|.|+-+.+.+.... +++.|++||+++..-+
T Consensus 140 D~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 140 DRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred CEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 99998888887765 8899999999998654
No 148
>PRK06182 short chain dehydrogenase; Validated
Probab=98.23 E-value=3.1e-05 Score=58.43 Aligned_cols=77 Identities=19% Similarity=0.215 Sum_probs=53.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-C---hhHHHh-HHHhhC-CCCCeE
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-T---EEELRN-ISRDAS-IPKPKL 83 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~---~~~~~~-~~~~~~-~~~~d~ 83 (202)
.+.+++|+|++|++|..+++.+...|++|+.+.++.+ +.+.+...+...+. | .+++.. +.+... ..++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~----~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~ 77 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVD----KMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV 77 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 3679999999999999999998889999999887765 33434334443332 2 344444 433221 247999
Q ss_pred EEecCCC
Q psy2961 84 ALNCVGG 90 (202)
Q Consensus 84 vid~~g~ 90 (202)
+|.++|.
T Consensus 78 li~~ag~ 84 (273)
T PRK06182 78 LVNNAGY 84 (273)
T ss_pred EEECCCc
Confidence 9999874
No 149
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=98.21 E-value=5e-06 Score=69.21 Aligned_cols=122 Identities=12% Similarity=0.130 Sum_probs=77.0
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCc-----------------ccHHHHHHHHHhcCCceEeChh--
Q psy2961 7 SLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR-----------------DDIDKLKSYLKSLGADYVFTEE-- 67 (202)
Q Consensus 7 ~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~-----------------~~~~~~~~~~~~lg~~~v~~~~-- 67 (202)
..++|++|+|.|+| ++|+++++.++..|++|+++...+ +....+.+.++++|++..++..
T Consensus 133 ~~~~g~~V~VIGaG-paGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGG-PAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 46789999999999 999999999999999977765322 1223456788889988777532
Q ss_pred -HHHhHHHhhCCCCCeEEEecCCCchHHH-HHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEEE
Q psy2961 68 -ELRNISRDASIPKPKLALNCVGGNSATN-LLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRGH 134 (202)
Q Consensus 68 -~~~~~~~~~~~~~~d~vid~~g~~~~~~-~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~ 134 (202)
+.. ... +. .++|+||+++|...... .+.....+|.+..++..... .... .....+++.+.|.
T Consensus 212 ~~~~-~~~-~~-~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~~l~~~-~~~~-~~~~gk~v~ViGg 275 (564)
T PRK12771 212 EDIT-LEQ-LE-GEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVDFLRAV-GEGE-PPFLGKRVVVIGG 275 (564)
T ss_pred CcCC-HHH-HH-hhCCEEEEeeCCCCCCcCCCCCCccCCcEEHHHHHHHh-hccC-CcCCCCCEEEECC
Confidence 111 111 11 36899999999765432 34444556666555432211 0111 2334566777773
No 150
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.19 E-value=3.3e-05 Score=58.72 Aligned_cols=94 Identities=15% Similarity=0.209 Sum_probs=67.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 89 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~g 89 (202)
.|++|+|.|.| .+|.++++.++.+|++|++..++++ +.+.+.++|... +...++.+ .. .++|+||.|+.
T Consensus 150 ~gk~v~IiG~G-~iG~avA~~L~~~G~~V~v~~R~~~----~~~~~~~~g~~~-~~~~~l~~---~l--~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGFG-RTGMTIARTFSALGARVFVGARSSA----DLARITEMGLIP-FPLNKLEE---KV--AEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcCh-HHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHCCCee-ecHHHHHH---Hh--ccCCEEEECCC
Confidence 57899999998 8999999999999998887776654 345555666543 23333333 22 46899999987
Q ss_pred CchHH-HHHHhcccCcEEEEEeccCC
Q psy2961 90 GNSAT-NLLRTLVSKGVMVTYGGMSR 114 (202)
Q Consensus 90 ~~~~~-~~~~~l~~~G~~v~~g~~~~ 114 (202)
..... ..++.++++..++.++..++
T Consensus 219 ~~ii~~~~l~~~k~~aliIDlas~Pg 244 (287)
T TIGR02853 219 ALVLTADVLSKLPKHAVIIDLASKPG 244 (287)
T ss_pred hHHhCHHHHhcCCCCeEEEEeCcCCC
Confidence 65433 36788899888888875443
No 151
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.18 E-value=5.1e-05 Score=56.31 Aligned_cols=81 Identities=14% Similarity=0.114 Sum_probs=53.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE-e--C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-F--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.+++|+|++|++|..++..+...|++++.+.++++...+..+.++..+.... + | +++... +.+... -.++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999999998887776543333333344443321 1 2 233333 222211 1479
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999875
No 152
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.17 E-value=1.5e-05 Score=56.41 Aligned_cols=74 Identities=20% Similarity=0.288 Sum_probs=52.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCC---ceEeC---hh---HHHh-HHHhhCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA---DYVFT---EE---ELRN-ISRDASIP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~---~~v~~---~~---~~~~-~~~~~~~~ 79 (202)
-|.+|||.|+++|+|+..++-...+|-+||.+.++++ +++.+++.-. ..+.| .. .+.+ +.+.+ .
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~----~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~--P 77 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEE----RLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEY--P 77 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHH----HHHHHHhcCcchheeeecccchhhHHHHHHHHHhhC--C
Confidence 3789999999999999999999999999998887776 5666654322 22333 22 2333 43333 5
Q ss_pred CCeEEEecCC
Q psy2961 80 KPKLALNCVG 89 (202)
Q Consensus 80 ~~d~vid~~g 89 (202)
..+++++++|
T Consensus 78 ~lNvliNNAG 87 (245)
T COG3967 78 NLNVLINNAG 87 (245)
T ss_pred chheeeeccc
Confidence 6789998887
No 153
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.16 E-value=2.8e-05 Score=63.89 Aligned_cols=107 Identities=16% Similarity=0.242 Sum_probs=66.2
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHh-----cCC------ceEe-ChhHHHhH
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-----LGA------DYVF-TEEELRNI 72 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~-----lg~------~~v~-~~~~~~~~ 72 (202)
..+.+.|.+|||+||+|++|..+++.+...|++|++++++.+......+.+.+ .|. ..+. |-.+...+
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI 153 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQI 153 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHH
Confidence 34567899999999999999999999988999999998877642211121211 121 1121 22222224
Q ss_pred HHhhCCCCCeEEEecCCCch----------------HHHHHHhccc--CcEEEEEeccC
Q psy2961 73 SRDASIPKPKLALNCVGGNS----------------ATNLLRTLVS--KGVMVTYGGMS 113 (202)
Q Consensus 73 ~~~~~~~~~d~vid~~g~~~----------------~~~~~~~l~~--~G~~v~~g~~~ 113 (202)
.+.. .++|+||.++|... ...+++.+.. .++||.++...
T Consensus 154 ~~aL--ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 154 GPAL--GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred HHHh--cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 4433 57899999987531 1113343332 37999988654
No 154
>PRK06198 short chain dehydrogenase; Provisional
Probab=98.16 E-value=0.00025 Score=53.03 Aligned_cols=81 Identities=20% Similarity=0.271 Sum_probs=52.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcCCceE---eC---hhHHHh-HHHhh-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYV---FT---EEELRN-ISRDA-SIPK 80 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~v---~~---~~~~~~-~~~~~-~~~~ 80 (202)
.+.+++|.|+++++|..+++.+...|++ |+.+.++.+...+..+.+++.+.... .| ++++.+ +.... .-++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5689999999999999999999999998 77777665432222334444454321 12 233333 22211 1146
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
+|++|.+.|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 9999999974
No 155
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.14 E-value=6.3e-05 Score=56.79 Aligned_cols=75 Identities=17% Similarity=0.177 Sum_probs=52.0
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE-eC---hhHHHh-HHHhhC-CCCCeEEE
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FT---EEELRN-ISRDAS-IPKPKLAL 85 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~~---~~~~~~-~~~~~~-~~~~d~vi 85 (202)
.++||+|++|++|..+++.+...|++|+.++++.+ +.+.+...+...+ .| .++... +..... .+++|++|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi 77 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAE----DVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLI 77 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 47999999999999999999999999998887764 3444444454433 23 333433 333221 24699999
Q ss_pred ecCCC
Q psy2961 86 NCVGG 90 (202)
Q Consensus 86 d~~g~ 90 (202)
+++|.
T Consensus 78 ~~ag~ 82 (274)
T PRK05693 78 NNAGY 82 (274)
T ss_pred ECCCC
Confidence 99983
No 156
>PRK07904 short chain dehydrogenase; Provisional
Probab=98.13 E-value=3.9e-05 Score=57.35 Aligned_cols=83 Identities=14% Similarity=0.117 Sum_probs=53.9
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCcEEEEecCccc-HHHHHHHHHhcCCc--eEe--C---hhHHHh-HHHhhC
Q psy2961 8 LSPGDVVIQNGANSACGQNVIQIARHW-GLKTINIVRNRDD-IDKLKSYLKSLGAD--YVF--T---EEELRN-ISRDAS 77 (202)
Q Consensus 8 ~~~g~~VlI~g~~~~vG~~~i~la~~~-g~~vi~~~~~~~~-~~~~~~~~~~lg~~--~v~--~---~~~~~~-~~~~~~ 77 (202)
+..+.+|+|+|+++++|..+++-+... |++|+.+.++++. .++..+.+++.+.. .++ | +.+... +.+...
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 456779999999999999999877666 5899998887763 33333445554431 122 2 233333 444333
Q ss_pred CCCCeEEEecCCC
Q psy2961 78 IPKPKLALNCVGG 90 (202)
Q Consensus 78 ~~~~d~vid~~g~ 90 (202)
.+++|++|.+.|.
T Consensus 85 ~g~id~li~~ag~ 97 (253)
T PRK07904 85 GGDVDVAIVAFGL 97 (253)
T ss_pred cCCCCEEEEeeec
Confidence 3579999887764
No 157
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.13 E-value=3.1e-05 Score=57.91 Aligned_cols=81 Identities=16% Similarity=0.208 Sum_probs=54.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe---C---hhHHHh-HHHhh-CCCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---T---EEELRN-ISRDA-SIPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~-~~~~~ 81 (202)
.+.++||+|++|++|..+++.+...|++|+.+.++++...+..+.+++.+....+ | ...+.. +.... ..+++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999999998888775433344445555544222 2 223333 22211 11468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999999874
No 158
>KOG1201|consensus
Probab=98.13 E-value=3.7e-05 Score=57.60 Aligned_cols=79 Identities=18% Similarity=0.326 Sum_probs=57.6
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCc--eEeC---hhHHHh----HHHhhCCC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD--YVFT---EEELRN----ISRDASIP 79 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~--~v~~---~~~~~~----~~~~~~~~ 79 (202)
-.|+.|||+|+|+|+|.+.++-....|++++...-+.+...+..+.+++.|.. ++.| +++... +++.. +
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~--G 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV--G 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc--C
Confidence 36899999999999999998888888997766666666666667777766622 2233 444333 44444 5
Q ss_pred CCeEEEecCC
Q psy2961 80 KPKLALNCVG 89 (202)
Q Consensus 80 ~~d~vid~~g 89 (202)
.+|++++.+|
T Consensus 114 ~V~ILVNNAG 123 (300)
T KOG1201|consen 114 DVDILVNNAG 123 (300)
T ss_pred CceEEEeccc
Confidence 7999999988
No 159
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.12 E-value=2.7e-05 Score=55.07 Aligned_cols=92 Identities=13% Similarity=0.178 Sum_probs=63.3
Q ss_pred EEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-ChhHHHhHHHhhCCCCCeEEEecCCCch
Q psy2961 14 VIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRNISRDASIPKPKLALNCVGGNS 92 (202)
Q Consensus 14 VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~d~vid~~g~~~ 92 (202)
|+|+||+|.+|..+++.+...|.+|+++++++++ .+. ..+.+.+. |..+...+.+.. .++|.||.++|...
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~----~~~--~~~~~~~~~d~~d~~~~~~al--~~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSK----AED--SPGVEIIQGDLFDPDSVKAAL--KGADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGG----HHH--CTTEEEEESCTTCHHHHHHHH--TTSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchh----ccc--ccccccceeeehhhhhhhhhh--hhcchhhhhhhhhc
Confidence 7899999999999999999999999999999874 233 34444433 334443344444 47999999998422
Q ss_pred -----HHHHHHhcccC--cEEEEEeccC
Q psy2961 93 -----ATNLLRTLVSK--GVMVTYGGMS 113 (202)
Q Consensus 93 -----~~~~~~~l~~~--G~~v~~g~~~ 113 (202)
...+++.++.. .+++.++...
T Consensus 73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccccccceeeeccc
Confidence 22345555443 3788777544
No 160
>PRK08324 short chain dehydrogenase; Validated
Probab=98.11 E-value=4.6e-05 Score=64.89 Aligned_cols=77 Identities=16% Similarity=0.198 Sum_probs=51.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCC--c--eE-eC---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA--D--YV-FT---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~--~--~v-~~---~~~~~~-~~~~~~-~~ 79 (202)
+|++|||+|++|++|..+++.+...|++|+.+.++.+.. ......++. . .+ .| ..+... +.+... .+
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~---~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g 497 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAA---EAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFG 497 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHH---HHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 678999999999999999999999999988888776532 122233332 1 11 12 233333 333211 24
Q ss_pred CCeEEEecCC
Q psy2961 80 KPKLALNCVG 89 (202)
Q Consensus 80 ~~d~vid~~g 89 (202)
++|++|+++|
T Consensus 498 ~iDvvI~~AG 507 (681)
T PRK08324 498 GVDIVVSNAG 507 (681)
T ss_pred CCCEEEECCC
Confidence 7999999998
No 161
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=98.09 E-value=1.5e-05 Score=60.10 Aligned_cols=99 Identities=22% Similarity=0.292 Sum_probs=61.5
Q ss_pred cccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce---Ee--ChhHHHhHHHhh
Q psy2961 2 LKDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY---VF--TEEELRNISRDA 76 (202)
Q Consensus 2 l~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~---v~--~~~~~~~~~~~~ 76 (202)
+.+.++++||++||-+|+| .|..++.+|+..|++|++++-++++.....+.+++.|... +. |+.++.
T Consensus 54 ~~~~~~l~~G~~vLDiGcG--wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~~~~------ 125 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCG--WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYRDLP------ 125 (273)
T ss_dssp HHTTTT--TT-EEEEES-T--TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GGG--------
T ss_pred HHHHhCCCCCCEEEEeCCC--ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeeccccC------
Confidence 3467889999999999997 6889999999999999999999886554455666666431 11 333321
Q ss_pred CCCCCeEEEe-----cCCCch----HHHHHHhcccCcEEEEEe
Q psy2961 77 SIPKPKLALN-----CVGGNS----ATNLLRTLVSKGVMVTYG 110 (202)
Q Consensus 77 ~~~~~d~vid-----~~g~~~----~~~~~~~l~~~G~~v~~g 110 (202)
..+|.|+- .+|... +..+-++|+|||++++-.
T Consensus 126 --~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~ 166 (273)
T PF02353_consen 126 --GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT 166 (273)
T ss_dssp ---S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred --CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence 37788754 344332 233678999999998643
No 162
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.09 E-value=3.1e-05 Score=62.20 Aligned_cols=91 Identities=15% Similarity=0.235 Sum_probs=66.9
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEec
Q psy2961 8 LSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNC 87 (202)
Q Consensus 8 ~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~ 87 (202)
.-.|++|+|.|.| .+|..+++.++.+|++|+++...+. +...+...|+..+ + +.+ .. ...|+|+.+
T Consensus 251 ~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~----~a~~A~~~G~~~~-~---lee---ll--~~ADIVI~a 316 (476)
T PTZ00075 251 MIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPI----CALQAAMEGYQVV-T---LED---VV--ETADIFVTA 316 (476)
T ss_pred CcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCch----hHHHHHhcCceec-c---HHH---HH--hcCCEEEEC
Confidence 4579999999999 8999999999999998777655543 2323334565432 2 222 11 467999999
Q ss_pred CCCchHH--HHHHhcccCcEEEEEecc
Q psy2961 88 VGGNSAT--NLLRTLVSKGVMVTYGGM 112 (202)
Q Consensus 88 ~g~~~~~--~~~~~l~~~G~~v~~g~~ 112 (202)
+|..... ..+..|++++.++.+|..
T Consensus 317 tGt~~iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 317 TGNKDIITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred CCcccccCHHHHhccCCCcEEEEcCCC
Confidence 9887654 478999999999999854
No 163
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.08 E-value=2.6e-05 Score=52.58 Aligned_cols=92 Identities=14% Similarity=0.200 Sum_probs=55.7
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcCCc--eEeChhHHHh-HHHhhCCCCCeEE
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGAD--YVFTEEELRN-ISRDASIPKPKLA 84 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~--~v~~~~~~~~-~~~~~~~~~~d~v 84 (202)
-.+.+|+|.|+| ++|.+++..+...|++ ++.+.++.++ ..+.++.++.. .++..+++.+ + ..+|+|
T Consensus 10 l~~~~vlviGaG-g~ar~v~~~L~~~g~~~i~i~nRt~~r---a~~l~~~~~~~~~~~~~~~~~~~~~------~~~Div 79 (135)
T PF01488_consen 10 LKGKRVLVIGAG-GAARAVAAALAALGAKEITIVNRTPER---AEALAEEFGGVNIEAIPLEDLEEAL------QEADIV 79 (135)
T ss_dssp GTTSEEEEESSS-HHHHHHHHHHHHTTSSEEEEEESSHHH---HHHHHHHHTGCSEEEEEGGGHCHHH------HTESEE
T ss_pred cCCCEEEEECCH-HHHHHHHHHHHHcCCCEEEEEECCHHH---HHHHHHHcCccccceeeHHHHHHHH------hhCCeE
Confidence 358999999998 8999999999999998 4444444432 23333455332 2334444433 2 467999
Q ss_pred EecCCCchHHHHHHhcccC----cEEEEEe
Q psy2961 85 LNCVGGNSATNLLRTLVSK----GVMVTYG 110 (202)
Q Consensus 85 id~~g~~~~~~~~~~l~~~----G~~v~~g 110 (202)
|.|++.+...-.-..+... +.++.++
T Consensus 80 I~aT~~~~~~i~~~~~~~~~~~~~~v~Dla 109 (135)
T PF01488_consen 80 INATPSGMPIITEEMLKKASKKLRLVIDLA 109 (135)
T ss_dssp EE-SSTTSTSSTHHHHTTTCHHCSEEEES-
T ss_pred EEecCCCCcccCHHHHHHHHhhhhceeccc
Confidence 9999876432112223333 5677776
No 164
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.08 E-value=0.00017 Score=53.46 Aligned_cols=102 Identities=14% Similarity=0.192 Sum_probs=61.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccH-HHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhhC-CCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDI-DKLKSYLKSLGADY-VF--T---EEELRN-ISRDAS-IPK 80 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~-~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~~-~~~ 80 (202)
.+.+++|+|++|++|..+++.+...|++|+.+.++.+.. ....+.++..+... .+ | +++... +.+... ..+
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 467999999999999999998888999998887765321 11112233333321 11 3 333333 333221 146
Q ss_pred CeEEEecCCCch-------------------H-HHHHHhcccCcEEEEEec
Q psy2961 81 PKLALNCVGGNS-------------------A-TNLLRTLVSKGVMVTYGG 111 (202)
Q Consensus 81 ~d~vid~~g~~~-------------------~-~~~~~~l~~~G~~v~~g~ 111 (202)
+|++|.+.|... + ..+.+.+..+|+++.++.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 899998876421 1 113444555689998875
No 165
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.07 E-value=4.4e-05 Score=56.15 Aligned_cols=80 Identities=13% Similarity=0.174 Sum_probs=54.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE---eC---hhHHHh-HHHhhCC-C-C
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FT---EEELRN-ISRDASI-P-K 80 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v---~~---~~~~~~-~~~~~~~-~-~ 80 (202)
.|.+++|.|+++++|.+++..+...|++|+.+.++.+..++..+.+++.+.+.. .| +++... +.+.... + .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 478999999999999999988888999998888777654333344445554321 12 333433 3332221 3 6
Q ss_pred CeEEEecCC
Q psy2961 81 PKLALNCVG 89 (202)
Q Consensus 81 ~d~vid~~g 89 (202)
+|++|.+.|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999986
No 166
>PRK05867 short chain dehydrogenase; Provisional
Probab=98.06 E-value=4.5e-05 Score=56.89 Aligned_cols=81 Identities=17% Similarity=0.257 Sum_probs=53.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE---eC---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FT---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v---~~---~~~~~~-~~~~~~-~~~~ 81 (202)
.|.++||+|+++++|..+++.+...|++|+.+.++.+..++..+.++..+.... .| +++... +.+... -+++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999999999998888776543333334444443221 12 333333 332211 1479
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+.|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999998873
No 167
>PRK07478 short chain dehydrogenase; Provisional
Probab=98.06 E-value=4.8e-05 Score=56.74 Aligned_cols=81 Identities=22% Similarity=0.332 Sum_probs=54.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.+++|+|+++++|..+++.+...|++|+.++++++..++..+.+++.+.+... | +++... +.+... -+.+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4679999999999999999999999999999988776433333444444433221 2 233333 333221 1479
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999998873
No 168
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.06 E-value=0.00016 Score=54.18 Aligned_cols=79 Identities=15% Similarity=0.139 Sum_probs=49.7
Q ss_pred CCCEEEEeCCC--cHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcCCceEe--C---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGAN--SACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYVF--T---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~~--~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~v~--~---~~~~~~-~~~~~~-~~ 79 (202)
.|.++||+|++ +++|.++++.+...|++|+.+.++.+. .+..+.+ ++++...++ | .++... +.+... -+
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA-RPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 47899999998 489999999988999998887765432 1122222 334432222 2 333333 333221 14
Q ss_pred CCeEEEecCC
Q psy2961 80 KPKLALNCVG 89 (202)
Q Consensus 80 ~~d~vid~~g 89 (202)
.+|++|.++|
T Consensus 88 ~ld~lv~nAg 97 (258)
T PRK07533 88 RLDFLLHSIA 97 (258)
T ss_pred CCCEEEEcCc
Confidence 6999999886
No 169
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.06 E-value=0.00011 Score=55.17 Aligned_cols=78 Identities=15% Similarity=0.243 Sum_probs=51.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCc--eE-eC---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD--YV-FT---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~--~v-~~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.+++|+|+++++|..+++.+...|++|+.+.++.+.. .+..++++.. .+ .| +++... +..... -+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNG---AAVAASLGERARFIATDITDDAAIERAVATVVARFGRV 81 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999999999888776531 2233444432 11 12 333333 332211 1468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+.|.
T Consensus 82 d~lv~~ag~ 90 (261)
T PRK08265 82 DILVNLACT 90 (261)
T ss_pred CEEEECCCC
Confidence 999998873
No 170
>PRK05866 short chain dehydrogenase; Provisional
Probab=98.06 E-value=4.8e-05 Score=58.13 Aligned_cols=81 Identities=17% Similarity=0.311 Sum_probs=53.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.+++|+|++|++|..+++.+...|++|+.+.++.+..++..+.+.+.+... ++ | .++... +..... -+++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 35789999999999999999888899999999888764333333344444332 11 2 333333 332211 1478
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 119 d~li~~AG~ 127 (293)
T PRK05866 119 DILINNAGR 127 (293)
T ss_pred CEEEECCCC
Confidence 999999874
No 171
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.05 E-value=0.00012 Score=55.29 Aligned_cols=78 Identities=14% Similarity=0.132 Sum_probs=49.9
Q ss_pred EEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE----eC---hhHHHh-HHHhhC-CCCCeE
Q psy2961 13 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV----FT---EEELRN-ISRDAS-IPKPKL 83 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v----~~---~~~~~~-~~~~~~-~~~~d~ 83 (202)
+++|+|++|++|..+++.+...|++|+.+.++++..++..+.++..+...+ .| .++... +.+... ..++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 689999999999999999889999988877665532222333344444321 23 233333 222211 246899
Q ss_pred EEecCCC
Q psy2961 84 ALNCVGG 90 (202)
Q Consensus 84 vid~~g~ 90 (202)
+|.+.|.
T Consensus 82 lv~~ag~ 88 (272)
T PRK07832 82 VMNIAGI 88 (272)
T ss_pred EEECCCC
Confidence 9999974
No 172
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.04 E-value=0.00018 Score=54.52 Aligned_cols=80 Identities=16% Similarity=0.216 Sum_probs=51.3
Q ss_pred CCCEEEEeCCC--cHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcCCceEe--C---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGAN--SACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYVF--T---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~~--~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~v~--~---~~~~~~-~~~~~~-~~ 79 (202)
.|++++|+|++ +++|.++++.+...|++|+.+.++.+ ..++.+.+ ++++....+ | .++... +.+... .+
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 47899999996 79999999999899999888766532 12233333 445543222 3 333333 333322 25
Q ss_pred CCeEEEecCCC
Q psy2961 80 KPKLALNCVGG 90 (202)
Q Consensus 80 ~~d~vid~~g~ 90 (202)
.+|++|+++|.
T Consensus 83 ~iDilVnnAG~ 93 (274)
T PRK08415 83 KIDFIVHSVAF 93 (274)
T ss_pred CCCEEEECCcc
Confidence 79999999873
No 173
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.03 E-value=6.2e-05 Score=55.91 Aligned_cols=80 Identities=18% Similarity=0.251 Sum_probs=53.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE---eC---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FT---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v---~~---~~~~~~-~~~~~~-~~~~ 81 (202)
++.++||+|++|++|..+++.+...|++|+.+.++++...+..+.++..+.... .| .....+ +..... ..++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999999988888776543333333444454321 12 233333 333221 1468
Q ss_pred eEEEecCC
Q psy2961 82 KLALNCVG 89 (202)
Q Consensus 82 d~vid~~g 89 (202)
|++|.++|
T Consensus 84 d~vi~~ag 91 (253)
T PRK08217 84 NGLINNAG 91 (253)
T ss_pred CEEEECCC
Confidence 99999887
No 174
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.02 E-value=6.4e-05 Score=55.28 Aligned_cols=81 Identities=14% Similarity=0.106 Sum_probs=53.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe----ChhHHHh-HHHhhC-CCCCeE
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF----TEEELRN-ISRDAS-IPKPKL 83 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~----~~~~~~~-~~~~~~-~~~~d~ 83 (202)
++.++||+|++|++|..+++.+...|++|+.+.++.+...+..+.+...+...+. +.+++.. +.+... -+++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 3789999999999999999999888999999988765433333334444443322 2333333 332211 147899
Q ss_pred EEecCCC
Q psy2961 84 ALNCVGG 90 (202)
Q Consensus 84 vid~~g~ 90 (202)
+|.+.|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9998874
No 175
>PRK06128 oxidoreductase; Provisional
Probab=98.02 E-value=0.00018 Score=55.13 Aligned_cols=81 Identities=16% Similarity=0.194 Sum_probs=50.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCccc--HHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD--IDKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~--~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~ 79 (202)
.|.++||+|+++++|..+++.+...|++|+.+..+.+. ..+..+.++..+..... | .++..+ +.+... -+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 36799999999999999999888899998877654431 11122334444543221 2 233333 332211 14
Q ss_pred CCeEEEecCCC
Q psy2961 80 KPKLALNCVGG 90 (202)
Q Consensus 80 ~~d~vid~~g~ 90 (202)
++|++|.++|.
T Consensus 134 ~iD~lV~nAg~ 144 (300)
T PRK06128 134 GLDILVNIAGK 144 (300)
T ss_pred CCCEEEECCcc
Confidence 69999998873
No 176
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.98 E-value=4.7e-05 Score=58.27 Aligned_cols=78 Identities=14% Similarity=0.199 Sum_probs=52.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCC--ceE---eC---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA--DYV---FT---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~--~~v---~~---~~~~~~-~~~~~~-~~ 79 (202)
.|.++||+|+++++|..+++.+...|++|+.+.++.+.. .+..++++. ... .| .++... +.+... .+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l---~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAEL---AALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999998888776532 223344432 111 22 333333 333221 14
Q ss_pred CCeEEEecCCC
Q psy2961 80 KPKLALNCVGG 90 (202)
Q Consensus 80 ~~d~vid~~g~ 90 (202)
++|++|+++|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 69999999984
No 177
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.98 E-value=8.2e-05 Score=55.84 Aligned_cols=81 Identities=17% Similarity=0.294 Sum_probs=52.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce-E--eC---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-V--FT---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-v--~~---~~~~~~-~~~~~~-~~~~ 81 (202)
++.++||+|++|++|..+++.+...|++|+.+.++++..++..+.++..+... + .| ++.... +.+... -+++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999988887654322223333333321 1 13 233332 222211 1479
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|+++|.
T Consensus 89 d~vi~~Ag~ 97 (263)
T PRK07814 89 DIVVNNVGG 97 (263)
T ss_pred CEEEECCCC
Confidence 999998873
No 178
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.97 E-value=9.1e-05 Score=55.52 Aligned_cols=83 Identities=19% Similarity=0.223 Sum_probs=53.6
Q ss_pred CCCCCEEEEeCCCc-HHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHh-cCCceEe----C---hhHHHh-HHHhhC
Q psy2961 8 LSPGDVVIQNGANS-ACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADYVF----T---EEELRN-ISRDAS 77 (202)
Q Consensus 8 ~~~g~~VlI~g~~~-~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~-lg~~~v~----~---~~~~~~-~~~~~~ 77 (202)
+..+.+++|+|++| ++|.++++.+...|++|+.+.++++..++..+.+++ ++...+. | +++... +.....
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 44678999999974 899999999999999988877766543333333433 4433221 3 233333 332211
Q ss_pred -CCCCeEEEecCCC
Q psy2961 78 -IPKPKLALNCVGG 90 (202)
Q Consensus 78 -~~~~d~vid~~g~ 90 (202)
.+++|++|.++|.
T Consensus 94 ~~g~id~li~~ag~ 107 (262)
T PRK07831 94 RLGRLDVLVNNAGL 107 (262)
T ss_pred HcCCCCEEEECCCC
Confidence 2478999999984
No 179
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.97 E-value=8.4e-05 Score=56.28 Aligned_cols=81 Identities=15% Similarity=0.174 Sum_probs=52.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE-e--C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-F--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
.|.+++|+|+++++|.++++.+...|++|+.+.++.+..++..+.++..+.... + | .++... +.+... .+++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999999988887776543333333344443321 1 2 333333 332211 2468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+.|.
T Consensus 85 d~li~nAg~ 93 (275)
T PRK05876 85 DVVFSNAGI 93 (275)
T ss_pred CEEEECCCc
Confidence 999998873
No 180
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.96 E-value=0.00032 Score=52.58 Aligned_cols=79 Identities=14% Similarity=0.201 Sum_probs=49.0
Q ss_pred CCCEEEEeCCC--cHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-Hhc-CCce-Ee--C---hhHHHh-HHHhhC-
Q psy2961 10 PGDVVIQNGAN--SACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSL-GADY-VF--T---EEELRN-ISRDAS- 77 (202)
Q Consensus 10 ~g~~VlI~g~~--~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~l-g~~~-v~--~---~~~~~~-~~~~~~- 77 (202)
.|.+++|+|++ +++|.++++.+...|++|+.+.++... .++.+.+ .++ +... .+ | +++... +.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 47899999997 799999999888999998887654321 1123333 333 2211 11 2 334443 333322
Q ss_pred CCCCeEEEecCC
Q psy2961 78 IPKPKLALNCVG 89 (202)
Q Consensus 78 ~~~~d~vid~~g 89 (202)
-+.+|+++.++|
T Consensus 85 ~g~ld~lv~nag 96 (257)
T PRK08594 85 VGVIHGVAHCIA 96 (257)
T ss_pred CCCccEEEECcc
Confidence 156999999876
No 181
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.94 E-value=0.00011 Score=54.79 Aligned_cols=82 Identities=18% Similarity=0.299 Sum_probs=53.0
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCc-eEe--C---hhHHHh-HHHhh-CCCC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD-YVF--T---EEELRN-ISRDA-SIPK 80 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~-~v~--~---~~~~~~-~~~~~-~~~~ 80 (202)
..+.+|+|+|++|++|..+++.+...|++|+.+.++++..++..+.++..+.. .++ | .+++.. +.+.. ..++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 45799999999999999999999999999999888766422222223222221 122 2 233333 33221 1247
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
+|++|.+.|.
T Consensus 87 ~d~li~~ag~ 96 (258)
T PRK06949 87 IDILVNNSGV 96 (258)
T ss_pred CCEEEECCCC
Confidence 8999999883
No 182
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.94 E-value=3.2e-05 Score=55.95 Aligned_cols=102 Identities=20% Similarity=0.232 Sum_probs=63.4
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC--cEEEEecCcccHHHHHHHHHhcCCceEe-ChhHHHh-HHHhhCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGL--KTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRN-ISRDASIP 79 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~--~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~-~~~~~~~~ 79 (202)
+...++||++||-.|+| .|+.++-+++..|. +|+++-..++-.+...+.++.++.+.|. ...|... ... ..
T Consensus 66 ~~L~l~pg~~VLeIGtG--sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~---~a 140 (209)
T PF01135_consen 66 EALDLKPGDRVLEIGTG--SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPE---EA 140 (209)
T ss_dssp HHTTC-TT-EEEEES-T--TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGG---G-
T ss_pred HHHhcCCCCEEEEecCC--CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhcccc---CC
Confidence 44568999999999997 47888888888775 4666655554323334555666765332 1122222 211 25
Q ss_pred CCeEEEecCCCchHHH-HHHhcccCcEEEEEe
Q psy2961 80 KPKLALNCVGGNSATN-LLRTLVSKGVMVTYG 110 (202)
Q Consensus 80 ~~d~vid~~g~~~~~~-~~~~l~~~G~~v~~g 110 (202)
+||.|+-+.+-+.... .++.|++||++|..-
T Consensus 141 pfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi 172 (209)
T PF01135_consen 141 PFDRIIVTAAVPEIPEALLEQLKPGGRLVAPI 172 (209)
T ss_dssp SEEEEEESSBBSS--HHHHHTEEEEEEEEEEE
T ss_pred CcCEEEEeeccchHHHHHHHhcCCCcEEEEEE
Confidence 7999998888776654 789999999999854
No 183
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.93 E-value=8.4e-05 Score=51.64 Aligned_cols=79 Identities=22% Similarity=0.325 Sum_probs=48.9
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCc---ccHHHHHHHHHhcCCceEe---C---hhHHHh-HHHhh-CCCC
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNR---DDIDKLKSYLKSLGADYVF---T---EEELRN-ISRDA-SIPK 80 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~---~~~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~-~~~~ 80 (202)
++|+|+|+++++|..+++.+...|+.+++.+++. +...+..+.++..+....+ | .++... +.+.. ....
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4799999999999998888887787655555544 3222233444555543222 2 334444 33332 2357
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999999884
No 184
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.93 E-value=0.00035 Score=52.01 Aligned_cols=105 Identities=13% Similarity=0.153 Sum_probs=62.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEec-CcccHHHHHHHHHhcCCceE-e--C---hhHHHh-HHHh------
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVR-NRDDIDKLKSYLKSLGADYV-F--T---EEELRN-ISRD------ 75 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~-~~~~~~~~~~~~~~lg~~~v-~--~---~~~~~~-~~~~------ 75 (202)
.+.+++|+|+++++|.++++.+...|++|+.+.+ +.+...+....++..+.... + | .++... +.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 4689999999999999999999999999877653 33322222233333333211 1 2 222222 2221
Q ss_pred -hCCCCCeEEEecCCCch-----------H---------------HHHHHhcccCcEEEEEeccCC
Q psy2961 76 -ASIPKPKLALNCVGGNS-----------A---------------TNLLRTLVSKGVMVTYGGMSR 114 (202)
Q Consensus 76 -~~~~~~d~vid~~g~~~-----------~---------------~~~~~~l~~~G~~v~~g~~~~ 114 (202)
.+..++|++|.++|... + ..+++.++..|+++.++....
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 148 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 11237999999887310 0 013445566799999886554
No 185
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.92 E-value=0.00012 Score=54.60 Aligned_cols=81 Identities=17% Similarity=0.193 Sum_probs=53.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE-e--C---hhHHHh-HHHhh-CCCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-F--T---EEELRN-ISRDA-SIPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~--~---~~~~~~-~~~~~-~~~~~ 81 (202)
.|.+|||+|+++++|..+++.+...|++|+.+.+++++..+..+.+++.|.... + | +++... +.... ..+++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 478999999999999999998888999998887776543333334444443221 1 2 333333 33221 12568
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999874
No 186
>PRK07791 short chain dehydrogenase; Provisional
Probab=97.92 E-value=0.00014 Score=55.32 Aligned_cols=82 Identities=16% Similarity=0.123 Sum_probs=52.5
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCc---------ccHHHHHHHHHhcCCceEe---C---hhHHHh-H
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR---------DDIDKLKSYLKSLGADYVF---T---EEELRN-I 72 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~---------~~~~~~~~~~~~lg~~~v~---~---~~~~~~-~ 72 (202)
-.|.++||+|+++++|.++++.+...|++|+.+.++. +...+..+.+++.+..... | .++... +
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 4678999999999999999998888999988876554 3222222333333433211 2 334443 3
Q ss_pred HHhhC-CCCCeEEEecCCC
Q psy2961 73 SRDAS-IPKPKLALNCVGG 90 (202)
Q Consensus 73 ~~~~~-~~~~d~vid~~g~ 90 (202)
.+... -+.+|++|.++|.
T Consensus 84 ~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 33222 1569999998874
No 187
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.92 E-value=0.00013 Score=54.37 Aligned_cols=81 Identities=15% Similarity=0.259 Sum_probs=53.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.+++|.|++|++|..+++.+...|++|+.+.++++...+..+.+++.+... .+ | ..+... +.+... .+++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999998888899999999888764333344444444332 11 2 233333 222211 1468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+.|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999998874
No 188
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.92 E-value=0.00027 Score=52.80 Aligned_cols=76 Identities=14% Similarity=0.217 Sum_probs=48.7
Q ss_pred CCCEEEEeCCC--cHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce--Ee--C---hhHHHh-HHHhhC-C
Q psy2961 10 PGDVVIQNGAN--SACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY--VF--T---EEELRN-ISRDAS-I 78 (202)
Q Consensus 10 ~g~~VlI~g~~--~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~--v~--~---~~~~~~-~~~~~~-~ 78 (202)
.|++++|+|++ +++|.++++.+...|++|+.+.+++ . ..+.++++.... .+ | +++... +.+... -
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~---~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-R---MKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV 81 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-H---HHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence 57899999998 7999999998888999998887653 2 223333332111 11 2 333333 333221 1
Q ss_pred CCCeEEEecCC
Q psy2961 79 PKPKLALNCVG 89 (202)
Q Consensus 79 ~~~d~vid~~g 89 (202)
+.+|++|.++|
T Consensus 82 g~iD~lv~nAg 92 (252)
T PRK06079 82 GKIDGIVHAIA 92 (252)
T ss_pred CCCCEEEEccc
Confidence 46999999887
No 189
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.92 E-value=0.00013 Score=54.88 Aligned_cols=80 Identities=14% Similarity=0.170 Sum_probs=52.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE---eC---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FT---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v---~~---~~~~~~-~~~~~~-~~~~ 81 (202)
++.+++|+|+++++|..+++.+...|++|+.+.++++...+..+.+...+.... +| +.+... +.+... .+++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999999999999999988776543222233333333211 12 333333 333221 2468
Q ss_pred eEEEecCC
Q psy2961 82 KLALNCVG 89 (202)
Q Consensus 82 d~vid~~g 89 (202)
|++|.+.|
T Consensus 88 D~vi~~ag 95 (264)
T PRK07576 88 DVLVSGAA 95 (264)
T ss_pred CEEEECCC
Confidence 99998876
No 190
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.91 E-value=0.00038 Score=56.50 Aligned_cols=81 Identities=12% Similarity=0.159 Sum_probs=52.6
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-C---hhHHHh-HHHhhC-CCCCe
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-T---EEELRN-ISRDAS-IPKPK 82 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~---~~~~~~-~~~~~~-~~~~d 82 (202)
.+|.++||+|+++++|..+++.+...|++|+.+.++... ++..+...+++...+. | +.+... +..... .+++|
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~-~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG-EALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence 368899999999999999999999999998887764321 1122333445544332 3 233333 322211 24699
Q ss_pred EEEecCCC
Q psy2961 83 LALNCVGG 90 (202)
Q Consensus 83 ~vid~~g~ 90 (202)
++|.++|.
T Consensus 287 ~vi~~AG~ 294 (450)
T PRK08261 287 IVVHNAGI 294 (450)
T ss_pred EEEECCCc
Confidence 99999883
No 191
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.91 E-value=4.1e-05 Score=57.37 Aligned_cols=102 Identities=15% Similarity=0.235 Sum_probs=73.5
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCc-e--E-e-ChhHHHhHHHhhC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD-Y--V-F-TEEELRNISRDAS 77 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~-~--v-~-~~~~~~~~~~~~~ 77 (202)
.+..+++||++||=+|+| -|.+++..|+..|++|++++-++++.+...+.+++.|.. . + + |+.++.
T Consensus 65 ~~kl~L~~G~~lLDiGCG--WG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd~~------- 135 (283)
T COG2230 65 LEKLGLKPGMTLLDIGCG--WGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRDFE------- 135 (283)
T ss_pred HHhcCCCCCCEEEEeCCC--hhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccccc-------
Confidence 456789999999999997 799999999999999999999998766556666677765 1 1 1 344432
Q ss_pred CCCCeEEE-----ecCCCch----HHHHHHhcccCcEEEEEeccCC
Q psy2961 78 IPKPKLAL-----NCVGGNS----ATNLLRTLVSKGVMVTYGGMSR 114 (202)
Q Consensus 78 ~~~~d~vi-----d~~g~~~----~~~~~~~l~~~G~~v~~g~~~~ 114 (202)
..||-|+ +-+|... +..+-++|+++|++++......
T Consensus 136 -e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~ 180 (283)
T COG2230 136 -EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGP 180 (283)
T ss_pred -cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecCC
Confidence 2367664 3344432 2336789999999998764443
No 192
>PRK08589 short chain dehydrogenase; Validated
Probab=97.91 E-value=0.00015 Score=54.80 Aligned_cols=80 Identities=16% Similarity=0.215 Sum_probs=52.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE---eC---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FT---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v---~~---~~~~~~-~~~~~~-~~~~ 81 (202)
.|.++||+|+++++|.++++.+...|++|+.+.++ +...+..+.+++.+.... .| +.+... +.+... -+.+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 47899999999999999999888899999998877 433333344444443211 12 233333 333221 1468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999998863
No 193
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.90 E-value=5.8e-05 Score=56.32 Aligned_cols=79 Identities=18% Similarity=0.158 Sum_probs=51.7
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe---ChhHHHhHHHhhCCCCCeEEEec
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---TEEELRNISRDASIPKPKLALNC 87 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~---~~~~~~~~~~~~~~~~~d~vid~ 87 (202)
+.++||+|++|++|..+++.+...|++|++++++++...+..+..+..+....+ |-.+...+..... .++|++|.+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~id~vi~~ 80 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE-WDVDVLLNN 80 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc-CCCCEEEEC
Confidence 468999999999999999999999999999888765322222333333332111 3223222333322 479999999
Q ss_pred CCC
Q psy2961 88 VGG 90 (202)
Q Consensus 88 ~g~ 90 (202)
.|.
T Consensus 81 ag~ 83 (257)
T PRK09291 81 AGI 83 (257)
T ss_pred CCc
Confidence 873
No 194
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.90 E-value=0.00012 Score=54.94 Aligned_cols=81 Identities=14% Similarity=0.208 Sum_probs=53.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhc-CCceE--e--C---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL-GADYV--F--T---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~l-g~~~v--~--~---~~~~~~-~~~~~~-~~ 79 (202)
.|.+++|.|+++++|.++++.+...|++|+.+.++++...+..+.+.+. +...+ + | .++... +.+... -+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4789999999999999999999999999998888776433323333332 21111 1 2 333333 333221 14
Q ss_pred CCeEEEecCCC
Q psy2961 80 KPKLALNCVGG 90 (202)
Q Consensus 80 ~~d~vid~~g~ 90 (202)
++|++|.++|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 69999999974
No 195
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.90 E-value=0.00014 Score=54.50 Aligned_cols=80 Identities=21% Similarity=0.277 Sum_probs=52.3
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CCCCe
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IPKPK 82 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~~~d 82 (202)
+.+|||.|++|++|..+++.+...|++|+.+.++++..++..+.++..+....+ | ...+.. +.+... .+++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 357999999999999999999999999999888765433333334444443221 2 233333 332211 14689
Q ss_pred EEEecCCC
Q psy2961 83 LALNCVGG 90 (202)
Q Consensus 83 ~vid~~g~ 90 (202)
++|.++|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999874
No 196
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.90 E-value=0.00014 Score=54.19 Aligned_cols=80 Identities=15% Similarity=0.263 Sum_probs=51.6
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhhC-CCCCe
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--T---EEELRN-ISRDAS-IPKPK 82 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~~-~~~~d 82 (202)
|.+++|.|+++++|..+++.+...|++|+.+.++.+...+..+.+++.+... .+ | +++... +.+... .+++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 5789999999999999999999999999888877654322233333333221 12 2 233333 332211 14689
Q ss_pred EEEecCCC
Q psy2961 83 LALNCVGG 90 (202)
Q Consensus 83 ~vid~~g~ 90 (202)
++|.+.|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99998873
No 197
>PRK06194 hypothetical protein; Provisional
Probab=97.90 E-value=0.00015 Score=55.08 Aligned_cols=81 Identities=21% Similarity=0.319 Sum_probs=51.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE-e--C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-F--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.++||+|++|++|..+++.+...|++|+.+.++.+...+..+.+...+.... + | ++++.. +..... .+++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 357899999999999999998888999998887765432222233333343321 1 2 333333 322211 2468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999999874
No 198
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.90 E-value=0.00013 Score=55.18 Aligned_cols=79 Identities=15% Similarity=0.169 Sum_probs=51.1
Q ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcCCceEe--C---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGANS--ACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYVF--T---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~--~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~v~--~---~~~~~~-~~~~~~-~~ 79 (202)
.|.++||+|+++ ++|.++++.+...|++|+.+.++++. .++.+.+ +++|....+ | .++... +.+... -+
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~-~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEAL-GKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHH-HHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 578999999996 99999999999999998887665321 1222333 344543222 2 334433 333322 14
Q ss_pred CCeEEEecCC
Q psy2961 80 KPKLALNCVG 89 (202)
Q Consensus 80 ~~d~vid~~g 89 (202)
.+|++|+++|
T Consensus 85 ~iD~lVnnAG 94 (271)
T PRK06505 85 KLDFVVHAIG 94 (271)
T ss_pred CCCEEEECCc
Confidence 7999999887
No 199
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.89 E-value=0.00013 Score=54.36 Aligned_cols=82 Identities=18% Similarity=0.264 Sum_probs=52.6
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce--E-eC---hhHHHh-HHHhhC-CCC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY--V-FT---EEELRN-ISRDAS-IPK 80 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~--v-~~---~~~~~~-~~~~~~-~~~ 80 (202)
-++.+|+|.|+++++|..+++.+...|++|+.+.++++..++..+.++..+... + .| .+++.. +.+... -++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 357899999999999999999999999999988877654322223333333321 1 12 233333 333211 146
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
+|++|.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (258)
T PRK07890 83 VDALVNNAFR 92 (258)
T ss_pred ccEEEECCcc
Confidence 8999998874
No 200
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.89 E-value=0.00013 Score=54.60 Aligned_cols=78 Identities=19% Similarity=0.280 Sum_probs=51.1
Q ss_pred EEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe--C---hhHHHh-HHHhhC-CCCCeEEE
Q psy2961 13 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF--T---EEELRN-ISRDAS-IPKPKLAL 85 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~--~---~~~~~~-~~~~~~-~~~~d~vi 85 (202)
++||+|+++++|..+++.+...|++|+.+.++++..++..+.+++.+....+ | +++... +.+... -+++|++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6899999999999999999889999988887765433333333333322222 2 334444 333221 24699999
Q ss_pred ecCCC
Q psy2961 86 NCVGG 90 (202)
Q Consensus 86 d~~g~ 90 (202)
.+.|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 98874
No 201
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.89 E-value=0.00017 Score=53.15 Aligned_cols=77 Identities=13% Similarity=0.078 Sum_probs=52.4
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-C---hhHHHh-HHHhhC-CCCCeEE
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-T---EEELRN-ISRDAS-IPKPKLA 84 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~---~~~~~~-~~~~~~-~~~~d~v 84 (202)
+.++||.|+++++|..+++.+...|++|+.+.++++. ..+.++..+...+. | .++... +.+... -+++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP---AIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh---HHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEE
Confidence 4689999999999999999988999999998877653 23444555543322 2 333333 333322 1468999
Q ss_pred EecCCC
Q psy2961 85 LNCVGG 90 (202)
Q Consensus 85 id~~g~ 90 (202)
|.+.|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 998874
No 202
>PRK08303 short chain dehydrogenase; Provisional
Probab=97.88 E-value=0.00018 Score=55.32 Aligned_cols=80 Identities=18% Similarity=0.284 Sum_probs=51.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCc----------ccHHHHHHHHHhcCCceE-e--C---hhHHHh-H
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR----------DDIDKLKSYLKSLGADYV-F--T---EEELRN-I 72 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~----------~~~~~~~~~~~~lg~~~v-~--~---~~~~~~-~ 72 (202)
.|.+++|+|+++++|.++++.+...|++|+.+.++. +..++..+.++..|...+ + | +++... +
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 478999999999999999999999999998887763 222222233444443321 1 2 344443 3
Q ss_pred HHhhC-CCCCeEEEecC-C
Q psy2961 73 SRDAS-IPKPKLALNCV-G 89 (202)
Q Consensus 73 ~~~~~-~~~~d~vid~~-g 89 (202)
.+... -+.+|++|+++ |
T Consensus 87 ~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHcCCccEEEECCcc
Confidence 33222 14699999988 5
No 203
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.88 E-value=0.00017 Score=53.72 Aligned_cols=81 Identities=15% Similarity=0.148 Sum_probs=52.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE-e--C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-F--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.++||+|+++++|..+++.+...|++++.+.++++...+..+.++..+.... + | +++... +..... .+++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 478999999999999999998888999999888776543222333333333221 1 2 333333 332211 2468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+.|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999874
No 204
>PRK06484 short chain dehydrogenase; Validated
Probab=97.88 E-value=0.00026 Score=58.41 Aligned_cols=102 Identities=20% Similarity=0.275 Sum_probs=65.8
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcCCceE-e--C---hhHHHh-HHHhhC-CC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYV-F--T---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~v-~--~---~~~~~~-~~~~~~-~~ 79 (202)
..|.++||+|+++++|..+++.+...|++|+.+.++.+. .+.+ ++++.... + | +++... +.+... .+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 342 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEG----AKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWG 342 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999999999999988877653 3333 33443321 1 2 333333 333221 14
Q ss_pred CCeEEEecCCCch---------------------------HHHHHHhcccCcEEEEEeccCC
Q psy2961 80 KPKLALNCVGGNS---------------------------ATNLLRTLVSKGVMVTYGGMSR 114 (202)
Q Consensus 80 ~~d~vid~~g~~~---------------------------~~~~~~~l~~~G~~v~~g~~~~ 114 (202)
.+|++|.++|... ...++..++.+|+++.++...+
T Consensus 343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 404 (520)
T PRK06484 343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS 404 (520)
T ss_pred CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence 6999999887420 0112344566799999876544
No 205
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.87 E-value=0.00015 Score=55.96 Aligned_cols=80 Identities=18% Similarity=0.144 Sum_probs=52.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhc-C-Cc-eEe--C---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL-G-AD-YVF--T---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~l-g-~~-~v~--~---~~~~~~-~~~~~~-~~ 79 (202)
.|.+++|+|+++++|..+++.+...|++|+.++++.+...+..+.+.+. + .. .++ | .++... +.+... .+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4789999999999999999988889999999998876433333333332 1 11 111 3 233333 322221 25
Q ss_pred CCeEEEecCC
Q psy2961 80 KPKLALNCVG 89 (202)
Q Consensus 80 ~~d~vid~~g 89 (202)
.+|++|.++|
T Consensus 93 ~iD~li~nAG 102 (313)
T PRK05854 93 PIHLLINNAG 102 (313)
T ss_pred CccEEEECCc
Confidence 7899999887
No 206
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.87 E-value=0.00019 Score=53.74 Aligned_cols=78 Identities=22% Similarity=0.312 Sum_probs=51.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhc-CCce-Ee--C---hhHHHh-HHHhhCCCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL-GADY-VF--T---EEELRN-ISRDASIPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~l-g~~~-v~--~---~~~~~~-~~~~~~~~~~ 81 (202)
.+.+++|.|+++++|..+++.+...|++|+.+.++++...+..+.+++. +... ++ | +++... +.. . +.+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~-~--g~i 82 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE-A--GDI 82 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH-h--CCC
Confidence 4789999999999999999988899999998887765432222333332 3221 11 2 233333 322 2 579
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+.|.
T Consensus 83 d~lv~~ag~ 91 (259)
T PRK06125 83 DILVNNAGA 91 (259)
T ss_pred CEEEECCCC
Confidence 999998874
No 207
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.87 E-value=0.00037 Score=53.73 Aligned_cols=75 Identities=19% Similarity=0.297 Sum_probs=53.5
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHh-HHHhhCCCCCeEEEec
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKLALNC 87 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~d~vid~ 87 (202)
-++.+|+|.|+| .+|..+++.++..|++.+.++++..+ ...+.++++|.. +++..++.+ + ..+|+||.|
T Consensus 176 l~~~~V~ViGaG-~iG~~~a~~L~~~g~~~V~v~~r~~~--ra~~la~~~g~~-~~~~~~~~~~l------~~aDvVi~a 245 (311)
T cd05213 176 LKGKKVLVIGAG-EMGELAAKHLAAKGVAEITIANRTYE--RAEELAKELGGN-AVPLDELLELL------NEADVVISA 245 (311)
T ss_pred ccCCEEEEECcH-HHHHHHHHHHHHcCCCEEEEEeCCHH--HHHHHHHHcCCe-EEeHHHHHHHH------hcCCEEEEC
Confidence 368999999997 99999999999888765555544321 134566778874 444444433 3 357999999
Q ss_pred CCCchH
Q psy2961 88 VGGNSA 93 (202)
Q Consensus 88 ~g~~~~ 93 (202)
++.+..
T Consensus 246 t~~~~~ 251 (311)
T cd05213 246 TGAPHY 251 (311)
T ss_pred CCCCch
Confidence 998876
No 208
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.87 E-value=0.00017 Score=53.90 Aligned_cols=81 Identities=15% Similarity=0.320 Sum_probs=52.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.++||+|++|++|..+++.+...|++|+.++++.++.+...+.++..+... ++ | .+++.. +.+... ..++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 47899999999999999999988899999988887653222223333333321 11 2 233333 222211 1468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 91 d~vi~~ag~ 99 (259)
T PRK08213 91 DILVNNAGA 99 (259)
T ss_pred CEEEECCCC
Confidence 999999874
No 209
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00013 Score=53.96 Aligned_cols=77 Identities=19% Similarity=0.229 Sum_probs=51.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcCCceEe-ChhHHHhHHHhhC-CCCCeEEEe
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYVF-TEEELRNISRDAS-IPKPKLALN 86 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~v~-~~~~~~~~~~~~~-~~~~d~vid 86 (202)
.+.+++|+|++|++|..+++.+...|++|+.+.++.+. .+.+ +..+...+. |..+...+.+... ..++|++|+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAA----LDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEE
Confidence 56899999999999999999999999998888876642 3333 334444332 3222222222111 246899999
Q ss_pred cCCC
Q psy2961 87 CVGG 90 (202)
Q Consensus 87 ~~g~ 90 (202)
+.|.
T Consensus 84 ~ag~ 87 (245)
T PRK07060 84 CAGI 87 (245)
T ss_pred CCCC
Confidence 9874
No 210
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00018 Score=53.86 Aligned_cols=81 Identities=12% Similarity=0.146 Sum_probs=52.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHh--cCCce-Ee--C---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS--LGADY-VF--T---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~--lg~~~-v~--~---~~~~~~-~~~~~~-~~ 79 (202)
.+.+++|.|+++++|..+++.+...|++|+.+.++++..++..+.+++ .+... ++ | +++... +.+... -+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999999999888776543333333333 22221 11 2 233333 332211 14
Q ss_pred CCeEEEecCCC
Q psy2961 80 KPKLALNCVGG 90 (202)
Q Consensus 80 ~~d~vid~~g~ 90 (202)
++|++|.++|.
T Consensus 86 ~id~li~~ag~ 96 (260)
T PRK07063 86 PLDVLVNNAGI 96 (260)
T ss_pred CCcEEEECCCc
Confidence 79999999873
No 211
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.85 E-value=0.00014 Score=56.04 Aligned_cols=101 Identities=17% Similarity=0.208 Sum_probs=66.9
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC--cEEEEecCcccHHHHHHHHHhcCCceEeC-hhHHHh-HHHhhCCCC
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGL--KTINIVRNRDDIDKLKSYLKSLGADYVFT-EEELRN-ISRDASIPK 80 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~--~vi~~~~~~~~~~~~~~~~~~lg~~~v~~-~~~~~~-~~~~~~~~~ 80 (202)
...++++++||..|+| .|..++.+++..+. .|+++-.+++......+.++.+|.+.+.. ..|..+ ... ...
T Consensus 75 ~L~i~~g~~VLDIG~G--tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~~---~~~ 149 (322)
T PRK13943 75 WVGLDKGMRVLEIGGG--TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVPE---FAP 149 (322)
T ss_pred hcCCCCCCEEEEEeCC--ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhcccc---cCC
Confidence 4467899999999997 59999999998764 57777666653222334445566654331 223222 221 146
Q ss_pred CeEEEecCCCchHH-HHHHhcccCcEEEEEe
Q psy2961 81 PKLALNCVGGNSAT-NLLRTLVSKGVMVTYG 110 (202)
Q Consensus 81 ~d~vid~~g~~~~~-~~~~~l~~~G~~v~~g 110 (202)
+|+|+.+.+-+... ...+.|+++|+++..-
T Consensus 150 fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~~ 180 (322)
T PRK13943 150 YDVIFVTVGVDEVPETWFTQLKEGGRVIVPI 180 (322)
T ss_pred ccEEEECCchHHhHHHHHHhcCCCCEEEEEe
Confidence 99999888765554 3778999999988743
No 212
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00014 Score=54.80 Aligned_cols=77 Identities=14% Similarity=0.072 Sum_probs=50.5
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcC-CceEe-C---hhHHHh-HHHhhC-CCCCeE
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLG-ADYVF-T---EEELRN-ISRDAS-IPKPKL 83 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg-~~~v~-~---~~~~~~-~~~~~~-~~~~d~ 83 (202)
+.+++|+|++|++|..+++.+...|++|+.+.++++.. .+..++++ ...+. | ++++.. +..... -+++|+
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALA---KETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDV 81 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHH---HHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 57999999999999999998888999988887766531 22223344 22221 2 344433 333221 157999
Q ss_pred EEecCCC
Q psy2961 84 ALNCVGG 90 (202)
Q Consensus 84 vid~~g~ 90 (202)
+|.++|.
T Consensus 82 li~~ag~ 88 (273)
T PRK07825 82 LVNNAGV 88 (273)
T ss_pred EEECCCc
Confidence 9999874
No 213
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00022 Score=53.52 Aligned_cols=80 Identities=18% Similarity=0.240 Sum_probs=50.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCc-eEe--C---hhHHHh-HHHhhCCCCCe
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD-YVF--T---EEELRN-ISRDASIPKPK 82 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~-~v~--~---~~~~~~-~~~~~~~~~~d 82 (202)
++.+++|+|++|++|..+++.+...|++|+.++++++...+....+ ..+.. ..+ | .++... .......+++|
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 4678999999999999999998899999999888765322111121 11211 111 2 233333 22221125789
Q ss_pred EEEecCCC
Q psy2961 83 LALNCVGG 90 (202)
Q Consensus 83 ~vid~~g~ 90 (202)
++|.++|.
T Consensus 83 ~lv~~ag~ 90 (263)
T PRK09072 83 VLINNAGV 90 (263)
T ss_pred EEEECCCC
Confidence 99999874
No 214
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.85 E-value=0.00047 Score=51.09 Aligned_cols=81 Identities=15% Similarity=0.174 Sum_probs=50.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCccc-HHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-IDKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IPK 80 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~-~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~~ 80 (202)
.+.+++|+|+++++|..+++.+...|++++..+++... ..+..+.++..+..... | .++... +.+... .++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 35789999999999999999999999998876654321 11122333344544321 2 333333 332211 157
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
+|++|.++|.
T Consensus 82 id~li~~ag~ 91 (246)
T PRK12938 82 IDVLVNNAGI 91 (246)
T ss_pred CCEEEECCCC
Confidence 9999999975
No 215
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00067 Score=51.77 Aligned_cols=82 Identities=13% Similarity=0.229 Sum_probs=51.5
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCccc-HHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-IDKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~-~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~ 79 (202)
-.+.++||+|+++++|..+++.+...|++|+.+.++.+. ..+..+.++..+....+ | .+++.. +.+... ..
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 346799999999999999998888899999888776532 11222333333433211 2 233333 333211 14
Q ss_pred CCeEEEecCCC
Q psy2961 80 KPKLALNCVGG 90 (202)
Q Consensus 80 ~~d~vid~~g~ 90 (202)
++|++|.++|.
T Consensus 124 ~iD~lI~~Ag~ 134 (290)
T PRK06701 124 RLDILVNNAAF 134 (290)
T ss_pred CCCEEEECCcc
Confidence 68999998874
No 216
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.85 E-value=0.00022 Score=52.64 Aligned_cols=81 Identities=19% Similarity=0.257 Sum_probs=53.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~~~ 81 (202)
++.+|||+|++|++|..+++.+...|++|+.+.++++......+.++..+....+ | ...+.. +.+... -.++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 3578999999999999999998889999988888766432223444444543222 2 233333 332211 1468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|.+|.++|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999999864
No 217
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.84 E-value=0.00014 Score=56.28 Aligned_cols=80 Identities=18% Similarity=0.238 Sum_probs=52.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhc-CCceE----eC-h---hHHHh-HHHhhCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL-GADYV----FT-E---EELRN-ISRDASIP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~l-g~~~v----~~-~---~~~~~-~~~~~~~~ 79 (202)
.|.+++|+||++++|.+.++.+...|++|+.+.++++..++..+.+++. +...+ .| . .+..+ +.+..++.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 5899999999999999999888889999999988876543333333332 21111 12 1 22223 44444444
Q ss_pred CCeEEEecCC
Q psy2961 80 KPKLALNCVG 89 (202)
Q Consensus 80 ~~d~vid~~g 89 (202)
++|++|+++|
T Consensus 132 didilVnnAG 141 (320)
T PLN02780 132 DVGVLINNVG 141 (320)
T ss_pred CccEEEEecC
Confidence 6779999886
No 218
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.84 E-value=0.00024 Score=53.34 Aligned_cols=81 Identities=17% Similarity=0.193 Sum_probs=53.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.+++|+|+++++|..++..+...|++++.+.++++...+..+.++..+..... | ++.... +.+... -+++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5689999999999999999888889999988877765433333344444543221 2 233333 332211 1468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+.|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999874
No 219
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.84 E-value=0.00054 Score=51.84 Aligned_cols=80 Identities=23% Similarity=0.229 Sum_probs=50.0
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCC--c-eEe--C---hhHHHhHHHhh-CCCCC
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA--D-YVF--T---EEELRNISRDA-SIPKP 81 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~--~-~v~--~---~~~~~~~~~~~-~~~~~ 81 (202)
+.++||+|++|++|..+++.+...|++|+.++++.+...+..+.+...+. . .++ | +++...+.+.. .-+++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 82 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI 82 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence 56899999999999999998888999999988876643222233333332 1 111 3 22222111111 12468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|+++.++|.
T Consensus 83 d~vv~~ag~ 91 (280)
T PRK06914 83 DLLVNNAGY 91 (280)
T ss_pred eEEEECCcc
Confidence 999999874
No 220
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.84 E-value=0.00024 Score=53.09 Aligned_cols=80 Identities=19% Similarity=0.265 Sum_probs=52.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE-e--C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-F--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.+|||+|+++++|..+++.+...|++|+.+.++ +..++..+.+.+.+.... + | .++... +.+... .+++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999988876 322222333344443311 1 2 233333 332211 2468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+.|.
T Consensus 93 d~li~~ag~ 101 (258)
T PRK06935 93 DILVNNAGT 101 (258)
T ss_pred CEEEECCCC
Confidence 999998874
No 221
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.84 E-value=0.00022 Score=52.94 Aligned_cols=80 Identities=19% Similarity=0.318 Sum_probs=51.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCc--eEe-C---hhHHHh-HHHh-hCCCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD--YVF-T---EEELRN-ISRD-ASIPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~--~v~-~---~~~~~~-~~~~-~~~~~~ 81 (202)
.+.++||+|++|++|..+++.+...|++|+.+.++++...+..+.+.. +.. .+. | .+++.. +.+. .....+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 457999999999999999999889999999998887642222222221 221 111 2 333333 3322 112468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 83 d~vi~~ag~ 91 (251)
T PRK07231 83 DILVNNAGT 91 (251)
T ss_pred CEEEECCCC
Confidence 999998874
No 222
>PRK08643 acetoin reductase; Validated
Probab=97.83 E-value=0.00023 Score=53.05 Aligned_cols=80 Identities=14% Similarity=0.175 Sum_probs=51.9
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CCCCe
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IPKPK 82 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~~~d 82 (202)
+.++||+|+++++|..+++.+...|++|+.+.++.+...+....+...+..... | ++.... +.+... .+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999999999998887765432222333333332211 2 333333 333211 24699
Q ss_pred EEEecCCC
Q psy2961 83 LALNCVGG 90 (202)
Q Consensus 83 ~vid~~g~ 90 (202)
++|.++|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999864
No 223
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.83 E-value=0.00021 Score=53.16 Aligned_cols=81 Identities=14% Similarity=0.251 Sum_probs=52.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.+|+|.|+++++|..+++.+...|++|+.+.++.+...+..+.+.+.+... .+ | .++... +.+... -+.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 45789999999999999999999999999988877654322233333344321 11 2 233333 332211 1468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|+++.+.|.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999998873
No 224
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.83 E-value=0.0002 Score=53.43 Aligned_cols=78 Identities=18% Similarity=0.188 Sum_probs=51.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-C---hhHHHh-HHHhhC-CCCCeE
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-T---EEELRN-ISRDAS-IPKPKL 83 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~---~~~~~~-~~~~~~-~~~~d~ 83 (202)
.|.+|+|+|++|++|..+++.+...|++|+.+.++++.. .+...+++...+. | .++... +.+... ..++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAG---KAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 578999999999999999999999999998888766421 1222344433222 3 233333 332211 246899
Q ss_pred EEecCCC
Q psy2961 84 ALNCVGG 90 (202)
Q Consensus 84 vid~~g~ 90 (202)
+|.++|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998874
No 225
>KOG0725|consensus
Probab=97.82 E-value=0.00021 Score=53.96 Aligned_cols=82 Identities=20% Similarity=0.314 Sum_probs=55.5
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCc------eEeC---hhHHHh-HHHhhC-
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD------YVFT---EEELRN-ISRDAS- 77 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~------~v~~---~~~~~~-~~~~~~- 77 (202)
-.|..++|+|+++++|.+++..+...|++|+.+.++++...+....+...+.. .+.| .++... +.....
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999998887543333333333332 1112 233333 333222
Q ss_pred -CCCCeEEEecCCC
Q psy2961 78 -IPKPKLALNCVGG 90 (202)
Q Consensus 78 -~~~~d~vid~~g~ 90 (202)
.+++|++++..|.
T Consensus 86 ~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 86 FFGKIDILVNNAGA 99 (270)
T ss_pred hCCCCCEEEEcCCc
Confidence 2579999998874
No 226
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.82 E-value=0.00068 Score=51.30 Aligned_cols=78 Identities=18% Similarity=0.234 Sum_probs=48.8
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhhCCCCCeE
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--T---EEELRN-ISRDASIPKPKL 83 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~~~~~~d~ 83 (202)
+++++|.|++ ++|..+++.+. .|++|+.++++.+..++..+.++..+... ++ | +++... +.+....+++|+
T Consensus 2 ~k~~lItGa~-gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGAG-GIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECCC-hHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 4678999985 99999888875 79999988877654322233344444322 12 2 334444 433211256999
Q ss_pred EEecCCC
Q psy2961 84 ALNCVGG 90 (202)
Q Consensus 84 vid~~g~ 90 (202)
+|.++|.
T Consensus 80 li~nAG~ 86 (275)
T PRK06940 80 LVHTAGV 86 (275)
T ss_pred EEECCCc
Confidence 9999974
No 227
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.82 E-value=0.0003 Score=54.37 Aligned_cols=94 Identities=16% Similarity=0.238 Sum_probs=61.2
Q ss_pred EEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-ChhHHHhHHHhhCCCCCeEEEecCCCc
Q psy2961 13 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRNISRDASIPKPKLALNCVGGN 91 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~d~vid~~g~~ 91 (202)
+|+|+||+|.+|..+++.+...|.+|++++++.+ +...+...+.+.+. |-.+...+.+.. .++|+||++++..
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~----~~~~l~~~~v~~v~~Dl~d~~~l~~al--~g~d~Vi~~~~~~ 75 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLR----KASFLKEWGAELVYGDLSLPETLPPSF--KGVTAIIDASTSR 75 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChH----HhhhHhhcCCEEEECCCCCHHHHHHHH--CCCCEEEECCCCC
Confidence 6999999999999999999899999999998764 23444445655443 222322233333 4689999987532
Q ss_pred h-------------HHHHHHhcccCc--EEEEEecc
Q psy2961 92 S-------------ATNLLRTLVSKG--VMVTYGGM 112 (202)
Q Consensus 92 ~-------------~~~~~~~l~~~G--~~v~~g~~ 112 (202)
. ...+++.++..| +++.++..
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 1 112444444443 78887754
No 228
>KOG4169|consensus
Probab=97.82 E-value=0.0011 Score=47.98 Aligned_cols=104 Identities=13% Similarity=0.175 Sum_probs=67.6
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhc-CCceEe-------ChhHHHh-HHHhhCC-CC
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL-GADYVF-------TEEELRN-ISRDASI-PK 80 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~l-g~~~v~-------~~~~~~~-~~~~~~~-~~ 80 (202)
|.++++.|+.||+|+....-+...|+++.++..+.|.. +....+++. ....++ +..+.+. .++.... +.
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~-~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENP-EAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCH-HHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 88999999999999999999999999999998888752 223333333 222222 2334444 4443322 45
Q ss_pred CeEEEecCCCch------------------HHHHHHhc-----ccCcEEEEEeccCCC
Q psy2961 81 PKLALNCVGGNS------------------ATNLLRTL-----VSKGVMVTYGGMSRE 115 (202)
Q Consensus 81 ~d~vid~~g~~~------------------~~~~~~~l-----~~~G~~v~~g~~~~~ 115 (202)
+|++|+..|-.. +...++.+ .+||-+|.+++..+-
T Consensus 84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL 141 (261)
T KOG4169|consen 84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGL 141 (261)
T ss_pred eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccccc
Confidence 899999887311 11123333 477999998876653
No 229
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.81 E-value=0.00024 Score=53.73 Aligned_cols=80 Identities=18% Similarity=0.268 Sum_probs=52.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.+++|+|+++++|..+++.+...|++|+.+.++.+...+..+.+++.+... .+ | ..+... +.+... -+++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999998888877654322333334444331 11 2 233333 332211 1479
Q ss_pred eEEEecCC
Q psy2961 82 KLALNCVG 89 (202)
Q Consensus 82 d~vid~~g 89 (202)
|++|.++|
T Consensus 89 d~li~~ag 96 (278)
T PRK08277 89 DILINGAG 96 (278)
T ss_pred CEEEECCC
Confidence 99999887
No 230
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.81 E-value=0.00022 Score=53.14 Aligned_cols=79 Identities=16% Similarity=0.305 Sum_probs=52.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE-e--C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-F--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
.|++++|+|+++++|.++++.+...|++|+.+.+++. ++..+.+++.+.+.. + | +++... +.+... -+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999999887765432 122344455554321 1 2 334444 333211 2469
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|+++.+.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999998873
No 231
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.81 E-value=0.00069 Score=50.77 Aligned_cols=80 Identities=10% Similarity=0.107 Sum_probs=48.7
Q ss_pred CCCEEEEeCCC--cHHHHHHHHHHHHCCCcEEEEecCcc--cHHHHHHHHHhcCCc-eEe--C---hhHHHh-HHHhhC-
Q psy2961 10 PGDVVIQNGAN--SACGQNVIQIARHWGLKTINIVRNRD--DIDKLKSYLKSLGAD-YVF--T---EEELRN-ISRDAS- 77 (202)
Q Consensus 10 ~g~~VlI~g~~--~~vG~~~i~la~~~g~~vi~~~~~~~--~~~~~~~~~~~lg~~-~v~--~---~~~~~~-~~~~~~- 77 (202)
.|++++|+|++ +++|.++++.+...|++|+.+.++.+ ...+..+.+.+.+.. ..+ | +++... +.+...
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 47899999985 79999999998899999887754432 111223333332221 122 2 333333 333221
Q ss_pred CCCCeEEEecCC
Q psy2961 78 IPKPKLALNCVG 89 (202)
Q Consensus 78 ~~~~d~vid~~g 89 (202)
.+.+|++|.++|
T Consensus 85 ~g~iD~lv~nag 96 (258)
T PRK07370 85 WGKLDILVHCLA 96 (258)
T ss_pred cCCCCEEEEccc
Confidence 146999999887
No 232
>PRK07985 oxidoreductase; Provisional
Probab=97.81 E-value=0.00064 Score=52.01 Aligned_cols=81 Identities=14% Similarity=0.153 Sum_probs=49.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc--cHHHHHHHHHhcCCceE-e--C---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD--DIDKLKSYLKSLGADYV-F--T---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~--~~~~~~~~~~~lg~~~v-~--~---~~~~~~-~~~~~~-~~ 79 (202)
.+.++||+|+++++|.++++.+...|++|+.+.++.+ ..++..+.+++.+.... + | .++... +.+... -+
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4579999999999999999999999999887664432 11111222333443221 1 2 233333 333221 24
Q ss_pred CCeEEEecCCC
Q psy2961 80 KPKLALNCVGG 90 (202)
Q Consensus 80 ~~d~vid~~g~ 90 (202)
++|+++.+.|.
T Consensus 128 ~id~lv~~Ag~ 138 (294)
T PRK07985 128 GLDIMALVAGK 138 (294)
T ss_pred CCCEEEECCCC
Confidence 68999998763
No 233
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.81 E-value=0.00027 Score=52.75 Aligned_cols=80 Identities=19% Similarity=0.226 Sum_probs=52.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~~~ 81 (202)
.|.++||+|++|++|..+++.+...|++++.++++++.. +..+.+++.+..... | .++... +.+... .+++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 467999999999999999988888999998888776532 222333334433211 2 233333 333221 1478
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999983
No 234
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.80 E-value=0.00029 Score=52.09 Aligned_cols=82 Identities=20% Similarity=0.270 Sum_probs=52.9
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhhC-CCC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--T---EEELRN-ISRDAS-IPK 80 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~~-~~~ 80 (202)
..+.+++|.|++|++|..+++.+...|++|+.+.++++...+..+.+++.+... ++ | +++... +..... .++
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 356789999999999999999999999999998887654322223333333321 11 2 333333 332211 246
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
+|++|.++|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 235
>PRK08017 oxidoreductase; Provisional
Probab=97.80 E-value=0.00024 Score=52.89 Aligned_cols=75 Identities=17% Similarity=0.187 Sum_probs=51.7
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-C---hhHHHh-HHHhh--CCCCCeEE
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-T---EEELRN-ISRDA--SIPKPKLA 84 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~---~~~~~~-~~~~~--~~~~~d~v 84 (202)
++|+|+|++|++|..+++.+...|++|+++.++.+ +.+.+++.+...+. | ..+... +.... .+..+|.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~i 78 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPD----DVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGL 78 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH----HhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEE
Confidence 57999999999999999999999999988887765 45555666665443 2 233333 22221 12468898
Q ss_pred EecCCC
Q psy2961 85 LNCVGG 90 (202)
Q Consensus 85 id~~g~ 90 (202)
+.+.|.
T Consensus 79 i~~ag~ 84 (256)
T PRK08017 79 FNNAGF 84 (256)
T ss_pred EECCCC
Confidence 888763
No 236
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.78 E-value=0.00022 Score=53.46 Aligned_cols=76 Identities=16% Similarity=0.266 Sum_probs=50.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcCCc-eEe--C---hhHHHh-HHHhhC-CCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGAD-YVF--T---EEELRN-ISRDAS-IPK 80 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~-~v~--~---~~~~~~-~~~~~~-~~~ 80 (202)
.+.+++|+|+++++|..+++.+...|++|+.+.++++. .+.+ .+++.. .++ | ..+... +.+... .+.
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 80 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEK----LASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGK 80 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 46899999999999999999999999999888877653 3333 333321 111 2 233333 333221 246
Q ss_pred CeEEEecCC
Q psy2961 81 PKLALNCVG 89 (202)
Q Consensus 81 ~d~vid~~g 89 (202)
+|++|.++|
T Consensus 81 id~li~~ag 89 (263)
T PRK06200 81 LDCFVGNAG 89 (263)
T ss_pred CCEEEECCC
Confidence 899999887
No 237
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00099 Score=49.23 Aligned_cols=81 Identities=14% Similarity=0.182 Sum_probs=50.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCccc-HHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-IDKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IPK 80 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~-~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~~ 80 (202)
++.+++|+|++|++|..+++.+...|++++.+.++.+. ..+..+.++..+..... | .++... +.+... -++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 56799999999999999999999999998877765432 11122333334432111 2 233333 332211 146
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
+|++|.++|.
T Consensus 84 id~vi~~ag~ 93 (245)
T PRK12937 84 IDVLVNNAGV 93 (245)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 238
>PRK06720 hypothetical protein; Provisional
Probab=97.78 E-value=0.00044 Score=48.47 Aligned_cols=80 Identities=18% Similarity=0.278 Sum_probs=50.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE-e--C---hhHHHh-HHHhh-CCCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-F--T---EEELRN-ISRDA-SIPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~--~---~~~~~~-~~~~~-~~~~~ 81 (202)
.+.+++|.|+++++|..++..+...|++|+.+.++.+...+..+.+++.+.... + | ..++.. +.+.. .-+++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999988888999988887665432222233333443321 2 2 233333 32221 12468
Q ss_pred eEEEecCC
Q psy2961 82 KLALNCVG 89 (202)
Q Consensus 82 d~vid~~g 89 (202)
|++|.++|
T Consensus 95 DilVnnAG 102 (169)
T PRK06720 95 DMLFQNAG 102 (169)
T ss_pred CEEEECCC
Confidence 99998877
No 239
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.78 E-value=8.4e-05 Score=57.55 Aligned_cols=80 Identities=15% Similarity=0.096 Sum_probs=50.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCc-eEe--C---hhHHHh-HHHhh-CCCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD-YVF--T---EEELRN-ISRDA-SIPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~-~v~--~---~~~~~~-~~~~~-~~~~~ 81 (202)
.+.+++|+|+++++|..+++.+...|++|+.++++.+...+..+.++..+.. .++ | ..+... +.+.. ...++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 4679999999999999999988889999999887765322222222211211 111 2 233333 33321 12469
Q ss_pred eEEEecCC
Q psy2961 82 KLALNCVG 89 (202)
Q Consensus 82 d~vid~~g 89 (202)
|++|+++|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999887
No 240
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.77 E-value=0.00034 Score=52.18 Aligned_cols=81 Identities=19% Similarity=0.270 Sum_probs=53.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce--Ee-C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY--VF-T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~--v~-~---~~~~~~-~~~~~~-~~~~ 81 (202)
.|.+++|.|+++++|..+++.+...|++|+.+.++++...+..+.+++.+... +. | +.++.. +..... -+.+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999888899999998887654333333344444321 11 2 333333 332211 1468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+.|.
T Consensus 90 d~vi~~ag~ 98 (256)
T PRK06124 90 DILVNNVGA 98 (256)
T ss_pred CEEEECCCC
Confidence 999998874
No 241
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.77 E-value=0.00039 Score=51.82 Aligned_cols=81 Identities=21% Similarity=0.231 Sum_probs=52.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce--Ee-C---hhHHHh-HHHhh-CCCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY--VF-T---EEELRN-ISRDA-SIPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~--v~-~---~~~~~~-~~~~~-~~~~~ 81 (202)
.+.+|||+|++|++|..+++.+...|++|+.+.++++...+....++..+... +. | +++... +.+.. ...++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 35799999999999999999888899999999888764322223333334332 11 2 333333 22221 11468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+++.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999998873
No 242
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.77 E-value=0.00024 Score=53.27 Aligned_cols=76 Identities=16% Similarity=0.217 Sum_probs=50.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHh-cCCce-Ee--C---hhHHHh-HHHhhC-CCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADY-VF--T---EEELRN-ISRDAS-IPK 80 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~-lg~~~-v~--~---~~~~~~-~~~~~~-~~~ 80 (202)
.+.+++|+|+++++|..+++.+...|++|+.+.++.+ +.+.+.+ .+... .+ | +.+... +.+... -+.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAA----GLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGK 79 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999999988877654 2333333 33221 11 2 233333 333221 146
Q ss_pred CeEEEecCC
Q psy2961 81 PKLALNCVG 89 (202)
Q Consensus 81 ~d~vid~~g 89 (202)
+|++|.+.|
T Consensus 80 id~li~~Ag 88 (262)
T TIGR03325 80 IDCLIPNAG 88 (262)
T ss_pred CCEEEECCC
Confidence 899999886
No 243
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.76 E-value=0.00019 Score=57.71 Aligned_cols=75 Identities=16% Similarity=0.274 Sum_probs=51.9
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEec
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNC 87 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~ 87 (202)
.++.+|+|+|+| .+|.++++.++..|+. ++++.++.+. ..+.++.+|.+ +++..+..+ .. .++|+||+|
T Consensus 180 ~~~~~vlViGaG-~iG~~~a~~L~~~G~~~V~v~~r~~~r---a~~la~~~g~~-~~~~~~~~~---~l--~~aDvVI~a 249 (423)
T PRK00045 180 LSGKKVLVIGAG-EMGELVAKHLAEKGVRKITVANRTLER---AEELAEEFGGE-AIPLDELPE---AL--AEADIVISS 249 (423)
T ss_pred ccCCEEEEECch-HHHHHHHHHHHHCCCCeEEEEeCCHHH---HHHHHHHcCCc-EeeHHHHHH---Hh--ccCCEEEEC
Confidence 467899999997 9999999999999985 4455444431 23456677764 444444433 11 468999999
Q ss_pred CCCchH
Q psy2961 88 VGGNSA 93 (202)
Q Consensus 88 ~g~~~~ 93 (202)
+|.+..
T Consensus 250 T~s~~~ 255 (423)
T PRK00045 250 TGAPHP 255 (423)
T ss_pred CCCCCc
Confidence 987653
No 244
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.00027 Score=52.42 Aligned_cols=78 Identities=14% Similarity=0.123 Sum_probs=51.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~~~ 81 (202)
++.+|+|+|++|++|..+++.+...|++++.+.++++. ..+..++++..... | .++... +..... .+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPAS---LEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRL 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHH---HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 46799999999999999999999999999888776542 12333445543211 2 223322 222111 2468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 82 d~vi~~ag~ 90 (249)
T PRK06500 82 DAVFINAGV 90 (249)
T ss_pred CEEEECCCC
Confidence 999998874
No 245
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.00031 Score=52.14 Aligned_cols=80 Identities=18% Similarity=0.253 Sum_probs=51.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.+++|+|++|++|..+++.+...|++|+.+.++.+...+..+.++ .+... ++ | +++..+ +.+... .+++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46799999999999999998888889999999887654322222222 23221 11 2 333333 222211 1478
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 83 d~vi~~ag~ 91 (252)
T PRK06138 83 DVLVNNAGF 91 (252)
T ss_pred CEEEECCCC
Confidence 999999884
No 246
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.00035 Score=51.15 Aligned_cols=75 Identities=15% Similarity=0.145 Sum_probs=50.2
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe--C---hhHHHhHHHhhCCCCCeEEEe
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF--T---EEELRNISRDASIPKPKLALN 86 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~--~---~~~~~~~~~~~~~~~~d~vid 86 (202)
.+|+|+|++|++|..+++.+...|++|+.+.++++. .+.+++++...+. | .++...+.+...+.++|++|.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~ 77 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQ----DTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFV 77 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcc----hHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEE
Confidence 479999999999999998888899999999888764 3334433222221 2 333444222233357999999
Q ss_pred cCCC
Q psy2961 87 CVGG 90 (202)
Q Consensus 87 ~~g~ 90 (202)
++|.
T Consensus 78 ~ag~ 81 (225)
T PRK08177 78 NAGI 81 (225)
T ss_pred cCcc
Confidence 8763
No 247
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.00036 Score=51.77 Aligned_cols=81 Identities=15% Similarity=0.145 Sum_probs=50.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce--E-eC---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY--V-FT---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~--v-~~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.+++|+|++|++|..+++.+...|++|+.+.++++...+..+.++..+... + .| ..+... +.+... .+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 46789999999999999999888899999998877653222222333223221 1 12 233333 222211 1468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (250)
T PRK07774 85 DYLVNNAAI 93 (250)
T ss_pred CEEEECCCC
Confidence 999999883
No 248
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.75 E-value=0.00092 Score=49.69 Aligned_cols=74 Identities=18% Similarity=0.248 Sum_probs=48.9
Q ss_pred EEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcCCceE-e--C---hhHHHh-HHHhhC-CCCCeE
Q psy2961 13 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYV-F--T---EEELRN-ISRDAS-IPKPKL 83 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~v-~--~---~~~~~~-~~~~~~-~~~~d~ 83 (202)
+|+|.|++|++|.++++.+...|++|+.+.++++. .+.+ ..++.... + | +++... +.+... .+++|+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 77 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQER----LQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV 77 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 68999999999999999999999999998887653 3333 22333211 1 2 333333 333221 146999
Q ss_pred EEecCCC
Q psy2961 84 ALNCVGG 90 (202)
Q Consensus 84 vid~~g~ 90 (202)
+|.++|.
T Consensus 78 vi~~ag~ 84 (248)
T PRK10538 78 LVNNAGL 84 (248)
T ss_pred EEECCCc
Confidence 9998864
No 249
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.75 E-value=0.00037 Score=51.40 Aligned_cols=81 Identities=17% Similarity=0.266 Sum_probs=52.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.+++|.|++|++|..++..+...|++|+.+.++++...+..+.++..+....+ | +.++.. +.+... -.++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 3578999999999999999988899999999887765422222333333332211 2 233333 333211 2478
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999998874
No 250
>PRK06196 oxidoreductase; Provisional
Probab=97.74 E-value=0.00026 Score=54.62 Aligned_cols=78 Identities=21% Similarity=0.225 Sum_probs=51.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcC-CceEe-C---hhHHHh-HHHhhC-CCCCe
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLG-ADYVF-T---EEELRN-ISRDAS-IPKPK 82 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg-~~~v~-~---~~~~~~-~~~~~~-~~~~d 82 (202)
.+.+|+|+|++|++|..+++.+...|++|+.++++.+... +.+.++. ...+. | .++... +.+... ..++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~---~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD 101 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAR---EALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRID 101 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCC
Confidence 4689999999999999999988889999999888765322 2222221 22211 2 333333 333221 25799
Q ss_pred EEEecCCC
Q psy2961 83 LALNCVGG 90 (202)
Q Consensus 83 ~vid~~g~ 90 (202)
++|.++|.
T Consensus 102 ~li~nAg~ 109 (315)
T PRK06196 102 ILINNAGV 109 (315)
T ss_pred EEEECCCC
Confidence 99998873
No 251
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.74 E-value=0.00038 Score=51.61 Aligned_cols=81 Identities=15% Similarity=0.195 Sum_probs=52.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.+|+|+|++|++|..+++.+...|++|+.++++.+...+..+.+...+... ++ | .+++.. +.+... ...+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 46799999999999999998888889999999887654333333344444321 11 2 233333 332211 1468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (251)
T PRK12826 85 DILVANAGI 93 (251)
T ss_pred CEEEECCCC
Confidence 999998864
No 252
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.74 E-value=0.00055 Score=49.24 Aligned_cols=101 Identities=14% Similarity=0.167 Sum_probs=63.4
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCC--CcEEEEecCcccHHHHHHHHHhcC-CceEeC-hhHHHh-HHHhhCCC
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWG--LKTINIVRNRDDIDKLKSYLKSLG-ADYVFT-EEELRN-ISRDASIP 79 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g--~~vi~~~~~~~~~~~~~~~~~~lg-~~~v~~-~~~~~~-~~~~~~~~ 79 (202)
...+.++++|+-.|+|+ |.+++.+++..+ .+++++-.+++..+...+.++.++ .+.+.. ..+..+ +... ..
T Consensus 35 ~l~~~~~~~vlDlG~Gt--G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~--~~ 110 (198)
T PRK00377 35 KLRLRKGDMILDIGCGT--GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTI--NE 110 (198)
T ss_pred HcCCCCcCEEEEeCCcC--CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhc--CC
Confidence 35678999999999984 899999998764 467777776653222233444566 332221 123323 3221 24
Q ss_pred CCeEEEecCCCch----HHHHHHhcccCcEEEEE
Q psy2961 80 KPKLALNCVGGNS----ATNLLRTLVSKGVMVTY 109 (202)
Q Consensus 80 ~~d~vid~~g~~~----~~~~~~~l~~~G~~v~~ 109 (202)
.+|.||...+... +..+.+.|+++|+++..
T Consensus 111 ~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (198)
T PRK00377 111 KFDRIFIGGGSEKLKEIISASWEIIKKGGRIVID 144 (198)
T ss_pred CCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence 6999998655332 22367789999999863
No 253
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.73 E-value=0.00025 Score=49.47 Aligned_cols=93 Identities=17% Similarity=0.287 Sum_probs=60.8
Q ss_pred EEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCC--ceEeChhHHHhHHHhhCCCCCeEEEecCCC
Q psy2961 13 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA--DYVFTEEELRNISRDASIPKPKLALNCVGG 90 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~--~~v~~~~~~~~~~~~~~~~~~d~vid~~g~ 90 (202)
+|.|+|++|-+|..+++-|+..|.+|+++++++++ ....+.... ..+++... +.+.. .++|+||++.|.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K----~~~~~~~~i~q~Difd~~~---~a~~l--~g~DaVIsA~~~ 72 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASK----LAARQGVTILQKDIFDLTS---LASDL--AGHDAVISAFGA 72 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHh----ccccccceeecccccChhh---hHhhh--cCCceEEEeccC
Confidence 57899999999999999999999999999999873 322211100 01122222 21222 689999999876
Q ss_pred ch--H--------HHHHHhcccC--cEEEEEeccCC
Q psy2961 91 NS--A--------TNLLRTLVSK--GVMVTYGGMSR 114 (202)
Q Consensus 91 ~~--~--------~~~~~~l~~~--G~~v~~g~~~~ 114 (202)
.. . ..++..|+.. -|+..+|+..+
T Consensus 73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGS 108 (211)
T COG2910 73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGS 108 (211)
T ss_pred CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence 51 1 1145566553 48888886654
No 254
>PRK09242 tropinone reductase; Provisional
Probab=97.73 E-value=0.00038 Score=51.98 Aligned_cols=81 Identities=16% Similarity=0.270 Sum_probs=52.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhc--CCceE-e--C---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL--GADYV-F--T---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~l--g~~~v-~--~---~~~~~~-~~~~~~-~~ 79 (202)
.|.+++|+|+++++|..+++.+...|++|+.+.++.+...+..+.++.. +.... + | +++... +.+... -+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999888765432222333332 22211 1 2 233333 332211 25
Q ss_pred CCeEEEecCCC
Q psy2961 80 KPKLALNCVGG 90 (202)
Q Consensus 80 ~~d~vid~~g~ 90 (202)
++|++|.+.|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 79999999985
No 255
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.73 E-value=0.00034 Score=51.91 Aligned_cols=83 Identities=13% Similarity=0.227 Sum_probs=54.1
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce--Ee-------ChhHHHh-HHHhhC
Q psy2961 8 LSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY--VF-------TEEELRN-ISRDAS 77 (202)
Q Consensus 8 ~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~--v~-------~~~~~~~-~~~~~~ 77 (202)
..++.+|+|.|+++++|..+++.+...|++|+.+.++.+..++..+.+++.+... ++ +..++.+ +.....
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 4578899999999999999998888889999998887654333334444444321 11 1233333 222211
Q ss_pred -CCCCeEEEecCCC
Q psy2961 78 -IPKPKLALNCVGG 90 (202)
Q Consensus 78 -~~~~d~vid~~g~ 90 (202)
...+|++|.++|.
T Consensus 89 ~~~~id~vi~~Ag~ 102 (247)
T PRK08945 89 QFGRLDGVLHNAGL 102 (247)
T ss_pred HhCCCCEEEECCcc
Confidence 1468999998764
No 256
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.00034 Score=51.52 Aligned_cols=78 Identities=13% Similarity=0.185 Sum_probs=50.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcC----CceEe-C---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLG----ADYVF-T---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg----~~~v~-~---~~~~~~-~~~~~~-~~ 79 (202)
++.+|+|+|++|++|..+++.+...|++|+++.++++.. .+..+++. ...+. | ..++.. +.+... ..
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~---~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKEL---EEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFG 81 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHH---HHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999988888899999988776532 12223332 12111 2 333433 333221 14
Q ss_pred CCeEEEecCCC
Q psy2961 80 KPKLALNCVGG 90 (202)
Q Consensus 80 ~~d~vid~~g~ 90 (202)
++|++|.+.|.
T Consensus 82 ~~d~vi~~ag~ 92 (237)
T PRK07326 82 GLDVLIANAGV 92 (237)
T ss_pred CCCEEEECCCC
Confidence 78999998864
No 257
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.73 E-value=0.00036 Score=52.05 Aligned_cols=78 Identities=13% Similarity=0.189 Sum_probs=51.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-C---hhHHHh-HHHhhC-CCCCeE
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-T---EEELRN-ISRDAS-IPKPKL 83 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~---~~~~~~-~~~~~~-~~~~d~ 83 (202)
.+.+++|+|+++++|..+++.+...|++|+.+.++.+. ..+.++..+...+. | +++... +.+... -+++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~---~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAEN---EAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHH---HHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999999999998877665432 33444433433222 2 333333 333211 146899
Q ss_pred EEecCCC
Q psy2961 84 ALNCVGG 90 (202)
Q Consensus 84 vid~~g~ 90 (202)
+|.++|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998874
No 258
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.00053 Score=51.16 Aligned_cols=81 Identities=22% Similarity=0.300 Sum_probs=52.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCccc-HHHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhhC-CCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-IDKLKSYLKSLGADY-VF--T---EEELRN-ISRDAS-IPK 80 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~-~~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~~-~~~ 80 (202)
.+.+++|+|+++++|..+++.+...|++|+.+.++.+. .++..+.++..+... .+ | .++... +.+... .+.
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46799999999999999999999999999988876542 122233344444321 11 2 333333 333211 256
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
+|++|.+.|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 8999999974
No 259
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.72 E-value=0.00036 Score=51.80 Aligned_cols=81 Identities=14% Similarity=0.236 Sum_probs=50.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEe-cCcccHHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIV-RNRDDIDKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IPK 80 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~-~~~~~~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~~ 80 (202)
++.+++|+|++|++|..+++.+...|++|+.+. ++.+..++..+.++..+..... | +.+... +.+... .++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 467999999999999999999999999987654 3433222222334444443221 2 233333 333221 146
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
+|++|.+.|.
T Consensus 83 id~vi~~ag~ 92 (250)
T PRK08063 83 LDVFVNNAAS 92 (250)
T ss_pred CCEEEECCCC
Confidence 8999998873
No 260
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.72 E-value=0.00048 Score=52.99 Aligned_cols=81 Identities=15% Similarity=0.184 Sum_probs=51.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc-cHHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhCCCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD-DIDKLKSYLKSLGADYVF---T---EEELRN-ISRDASIPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~-~~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~~~~~ 81 (202)
.|.+++|+|+++++|...++.+...|++|+....+.. ..++..+.+++.|..... | .++... +.....-+.+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i 90 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL 90 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999988889999888765433 211223334444543222 2 233333 3322222579
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 91 D~li~nAG~ 99 (306)
T PRK07792 91 DIVVNNAGI 99 (306)
T ss_pred CEEEECCCC
Confidence 999998874
No 261
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.72 E-value=0.00038 Score=52.41 Aligned_cols=78 Identities=17% Similarity=0.131 Sum_probs=50.8
Q ss_pred EEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe---C---hhHHHh-HHHhh-CCCCCeEE
Q psy2961 13 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---T---EEELRN-ISRDA-SIPKPKLA 84 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~-~~~~~d~v 84 (202)
+|+|+|++|++|..+++.+...|++|+.+.++.+..++..+.++..+.+..+ | +.+..+ +.... ...++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999999999999888889999998887765433333334444433221 2 233333 32221 12469999
Q ss_pred EecCCC
Q psy2961 85 LNCVGG 90 (202)
Q Consensus 85 id~~g~ 90 (202)
|.++|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 999874
No 262
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.71 E-value=0.00044 Score=51.29 Aligned_cols=79 Identities=18% Similarity=0.303 Sum_probs=52.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
.|.++||+|+++++|..+++.+...|++|+.+.+++. .+..+.+++++... ++ | .++... +.+... ..++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999998899999988886542 22234445555331 11 2 333433 333221 2469
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998874
No 263
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.69 E-value=0.00029 Score=51.25 Aligned_cols=103 Identities=23% Similarity=0.194 Sum_probs=63.9
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCC--CcEEEEecCcccHHHHHHHHHhcCCceEe-ChhHHHhHHHhhCCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWG--LKTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRNISRDASIPK 80 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g--~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~ 80 (202)
+..++++|++||-.|+| .|..+..+++..+ .+|+++-.+++-.+...+.++.+|...+. ...|... .......
T Consensus 70 ~~l~~~~g~~VLdIG~G--sG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~--~~~~~~~ 145 (212)
T PRK13942 70 ELLDLKEGMKVLEIGTG--SGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTL--GYEENAP 145 (212)
T ss_pred HHcCCCCcCEEEEECCc--ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc--CCCcCCC
Confidence 34568899999999987 5788888888775 47777776665333333444455543221 1111111 0112257
Q ss_pred CeEEEecCCCchHH-HHHHhcccCcEEEEEe
Q psy2961 81 PKLALNCVGGNSAT-NLLRTLVSKGVMVTYG 110 (202)
Q Consensus 81 ~d~vid~~g~~~~~-~~~~~l~~~G~~v~~g 110 (202)
+|+|+-+...+... .+++.|++||+++..-
T Consensus 146 fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~~ 176 (212)
T PRK13942 146 YDRIYVTAAGPDIPKPLIEQLKDGGIMVIPV 176 (212)
T ss_pred cCEEEECCCcccchHHHHHhhCCCcEEEEEE
Confidence 99987655444443 4788999999988754
No 264
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.69 E-value=0.00038 Score=52.27 Aligned_cols=80 Identities=11% Similarity=0.195 Sum_probs=49.5
Q ss_pred CCCEEEEeCC--CcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcCCceEe--C---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGA--NSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYVF--T---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~--~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~v~--~---~~~~~~-~~~~~~-~~ 79 (202)
.|.+++|+|+ ++++|.++++.+...|++|+.+.+.+ ...+..+.+ ++++....+ | +++... +.+... .+
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 5689999996 56999999999999999988765442 212223333 233432222 2 344443 333221 15
Q ss_pred CCeEEEecCCC
Q psy2961 80 KPKLALNCVGG 90 (202)
Q Consensus 80 ~~d~vid~~g~ 90 (202)
++|++|+++|-
T Consensus 84 ~iD~lVnnAG~ 94 (261)
T PRK08690 84 GLDGLVHSIGF 94 (261)
T ss_pred CCcEEEECCcc
Confidence 79999998863
No 265
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.69 E-value=0.00056 Score=51.05 Aligned_cols=81 Identities=22% Similarity=0.301 Sum_probs=52.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE-e--C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-F--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.+|+|.|+++++|..+++.+...|++++.++++.+......+.++..+.+.. + | .++... +..... -.++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999998888999998888776532222233333343321 1 2 233333 332211 1468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+.|.
T Consensus 90 d~li~~ag~ 98 (255)
T PRK06113 90 DILVNNAGG 98 (255)
T ss_pred CEEEECCCC
Confidence 999998873
No 266
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=97.68 E-value=0.0037 Score=49.27 Aligned_cols=82 Identities=16% Similarity=0.197 Sum_probs=49.9
Q ss_pred CCCCEEEEeCCCcHHHHH--HHHHHHHCCCcEEEEecCcccHHH------------HHHHHHhcCCceE-e--C---hhH
Q psy2961 9 SPGDVVIQNGANSACGQN--VIQIARHWGLKTINIVRNRDDIDK------------LKSYLKSLGADYV-F--T---EEE 68 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~--~i~la~~~g~~vi~~~~~~~~~~~------------~~~~~~~lg~~~v-~--~---~~~ 68 (202)
..|+++||+|+++++|++ +++.+ ..|++++++....+.... -.+.++++|.... + | .+.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 446799999999999999 56666 899998887643221110 1234455665422 2 2 233
Q ss_pred HHh-HHHhhC-CCCCeEEEecCCCc
Q psy2961 69 LRN-ISRDAS-IPKPKLALNCVGGN 91 (202)
Q Consensus 69 ~~~-~~~~~~-~~~~d~vid~~g~~ 91 (202)
... +.+... -+++|+++.+++.+
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 333 222211 15699999999866
No 267
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.00038 Score=52.11 Aligned_cols=82 Identities=11% Similarity=0.046 Sum_probs=52.3
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcCCc--eEe--C---hhHHHh-HHHhh
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGAD--YVF--T---EEELRN-ISRDA 76 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~--~v~--~---~~~~~~-~~~~~ 76 (202)
.+.-++.++||+|++|++|..+++.+...|++|+.+.++++. .+.+ ...... .++ | +..+.. +.+..
T Consensus 6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (264)
T PRK12829 6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAA----LAATAARLPGAKVTATVADVADPAQVERVFDTAV 81 (264)
T ss_pred hhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHH
Confidence 344578899999999999999999999999998888876543 2222 222211 111 2 233322 22211
Q ss_pred C-CCCCeEEEecCCCc
Q psy2961 77 S-IPKPKLALNCVGGN 91 (202)
Q Consensus 77 ~-~~~~d~vid~~g~~ 91 (202)
. -.++|+||.+.|..
T Consensus 82 ~~~~~~d~vi~~ag~~ 97 (264)
T PRK12829 82 ERFGGLDVLVNNAGIA 97 (264)
T ss_pred HHhCCCCEEEECCCCC
Confidence 1 14799999988754
No 268
>PRK08278 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.00067 Score=51.26 Aligned_cols=81 Identities=12% Similarity=0.233 Sum_probs=51.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCccc-------HHHHHHHHHhcCCceEe---C---hhHHHh-HHHh
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-------IDKLKSYLKSLGADYVF---T---EEELRN-ISRD 75 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~-------~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~ 75 (202)
.+.+++|+|+++++|..+++.+...|++|+.+.++.+. ..+..+.++..+..... | +++... +.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 46799999999999999999888899999988876542 11112233344443221 3 233333 2222
Q ss_pred hC-CCCCeEEEecCCC
Q psy2961 76 AS-IPKPKLALNCVGG 90 (202)
Q Consensus 76 ~~-~~~~d~vid~~g~ 90 (202)
.. -+.+|++|.++|.
T Consensus 85 ~~~~g~id~li~~ag~ 100 (273)
T PRK08278 85 VERFGGIDICVNNASA 100 (273)
T ss_pred HHHhCCCCEEEECCCC
Confidence 11 1469999999874
No 269
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.68 E-value=0.00049 Score=51.65 Aligned_cols=79 Identities=14% Similarity=0.202 Sum_probs=50.1
Q ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcCCceEe--C---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGANS--ACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYVF--T---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~--~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~v~--~---~~~~~~-~~~~~~-~~ 79 (202)
.|.+++|+|+++ ++|.++++.+...|++|+.+.+++ ...+..+.+ +++|....+ | +++... +.+... -+
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG 85 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 578999999987 899999988888999988876553 222233333 333443322 3 334433 333222 14
Q ss_pred CCeEEEecCC
Q psy2961 80 KPKLALNCVG 89 (202)
Q Consensus 80 ~~d~vid~~g 89 (202)
.+|++++++|
T Consensus 86 ~iDilVnnag 95 (260)
T PRK06603 86 SFDFLLHGMA 95 (260)
T ss_pred CccEEEEccc
Confidence 6999999886
No 270
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.67 E-value=0.00052 Score=52.71 Aligned_cols=80 Identities=24% Similarity=0.304 Sum_probs=50.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhc--CCce-Ee--C---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL--GADY-VF--T---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~l--g~~~-v~--~---~~~~~~-~~~~~~-~~ 79 (202)
.|.+|+|.|+++++|..+++.+...|++|+.++++.+...+..+.+.+. +... ++ | .++... +.+... .+
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 5789999999999999999988888999998888765422222233221 1111 11 2 233333 333221 24
Q ss_pred CCeEEEecCC
Q psy2961 80 KPKLALNCVG 89 (202)
Q Consensus 80 ~~d~vid~~g 89 (202)
++|++|.++|
T Consensus 95 ~iD~li~nAg 104 (306)
T PRK06197 95 RIDLLINNAG 104 (306)
T ss_pred CCCEEEECCc
Confidence 6999999887
No 271
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.67 E-value=0.00038 Score=51.37 Aligned_cols=80 Identities=20% Similarity=0.365 Sum_probs=51.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCc---eE-eC-----hhHHHh----HHHhh
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD---YV-FT-----EEELRN----ISRDA 76 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~---~v-~~-----~~~~~~----~~~~~ 76 (202)
++.+++|+|++|++|..+++.+...|++|+.+.++++..++..+.+.+.+.. .+ .| ..++.. +.+..
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 4679999999999999999999999999999888876433333333333321 11 12 122222 22222
Q ss_pred CCCCCeEEEecCCC
Q psy2961 77 SIPKPKLALNCVGG 90 (202)
Q Consensus 77 ~~~~~d~vid~~g~ 90 (202)
. ..+|++|.++|.
T Consensus 85 ~-~~id~vi~~ag~ 97 (239)
T PRK08703 85 Q-GKLDGIVHCAGY 97 (239)
T ss_pred C-CCCCEEEEeccc
Confidence 1 368999999884
No 272
>PRK12743 oxidoreductase; Provisional
Probab=97.66 E-value=0.00052 Score=51.28 Aligned_cols=80 Identities=13% Similarity=0.162 Sum_probs=50.7
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCccc-HHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CCCC
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-IDKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~-~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~~~ 81 (202)
+.+|+|+|+++++|..+++.+...|++|+.+.+++.. ..+..+.++..+....+ | +.+... +.+... .+++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5689999999999999999999999999887655432 11222344445543221 2 233333 222211 1468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+.|.
T Consensus 82 d~li~~ag~ 90 (256)
T PRK12743 82 DVLVNNAGA 90 (256)
T ss_pred CEEEECCCC
Confidence 999998874
No 273
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.66 E-value=0.00038 Score=52.67 Aligned_cols=77 Identities=14% Similarity=0.182 Sum_probs=50.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhc-CCce-Ee--C---hhHHHh-HHHhhC-CCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL-GADY-VF--T---EEELRN-ISRDAS-IPK 80 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~l-g~~~-v~--~---~~~~~~-~~~~~~-~~~ 80 (202)
.+.++||+|++|++|..+++.+...|++|+.+.++.+ +.+.+.+. +... .+ | .+.... +..... -++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~----~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEA----ARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHH----HHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3578999999999999999998889999999888765 23333332 2211 11 2 233333 332211 146
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
+|++|.++|.
T Consensus 79 ~d~vv~~ag~ 88 (277)
T PRK06180 79 IDVLVNNAGY 88 (277)
T ss_pred CCEEEECCCc
Confidence 8999999875
No 274
>PRK05599 hypothetical protein; Provisional
Probab=97.66 E-value=0.00044 Score=51.41 Aligned_cols=77 Identities=18% Similarity=0.228 Sum_probs=49.2
Q ss_pred EEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce--Ee--C---hhHHHh-HHHhhC-CCCCeE
Q psy2961 13 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY--VF--T---EEELRN-ISRDAS-IPKPKL 83 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~--v~--~---~~~~~~-~~~~~~-~~~~d~ 83 (202)
+++|+|+++++|.++++... .|++|+.+.++++..++..+.+++.|.+. .+ | .++... +.+... .+++|+
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 80 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL 80 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence 68999999999999887665 59999988887765444344455555331 22 2 233333 322211 247899
Q ss_pred EEecCCC
Q psy2961 84 ALNCVGG 90 (202)
Q Consensus 84 vid~~g~ 90 (202)
+|.+.|.
T Consensus 81 lv~nag~ 87 (246)
T PRK05599 81 AVVAFGI 87 (246)
T ss_pred EEEecCc
Confidence 9988874
No 275
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.66 E-value=0.00043 Score=51.77 Aligned_cols=75 Identities=16% Similarity=0.138 Sum_probs=49.7
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcC-Cc-eEe--C---hhHHHh-HHHhhC--CCC
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLG-AD-YVF--T---EEELRN-ISRDAS--IPK 80 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg-~~-~v~--~---~~~~~~-~~~~~~--~~~ 80 (202)
.++||+|++|++|..+++.+...|++|+.+.++.+. .+.+ ..++ .. .++ | +.++.. +..... .++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~ 77 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAG----LAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGR 77 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHH----HHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 479999999999999999888899999988877653 3333 2232 11 111 2 333444 333211 357
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
+|++|.++|.
T Consensus 78 id~vi~~ag~ 87 (260)
T PRK08267 78 LDVLFNNAGI 87 (260)
T ss_pred CCEEEECCCC
Confidence 9999999974
No 276
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.66 E-value=0.00042 Score=51.78 Aligned_cols=77 Identities=17% Similarity=0.155 Sum_probs=48.7
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcC----CceEe-C---hhHHHh-HHHhhC-CCC
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLG----ADYVF-T---EEELRN-ISRDAS-IPK 80 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg----~~~v~-~---~~~~~~-~~~~~~-~~~ 80 (202)
+.+|+|+|++|++|..+++.+...|++|+.+.++++... +..+++. ...+. | .++..+ +.+... .+.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~---~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQ---AFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 468999999999999999988889999888887765321 2222221 11111 2 233333 333221 145
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
+|++|.++|.
T Consensus 79 id~lv~~ag~ 88 (257)
T PRK07024 79 PDVVIANAGI 88 (257)
T ss_pred CCEEEECCCc
Confidence 8999998873
No 277
>PRK09186 flagellin modification protein A; Provisional
Probab=97.66 E-value=0.00051 Score=51.19 Aligned_cols=80 Identities=20% Similarity=0.306 Sum_probs=51.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHH-hcCCc---e-EeC---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK-SLGAD---Y-VFT---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~-~lg~~---~-v~~---~~~~~~-~~~~~~-~~ 79 (202)
.+.+|+|+|+++++|..++..+...|++|+.+.++++...+..+.+. .++.. . ..| ++++.. +.+... -+
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999999998877654222222222 22222 1 113 333333 332211 14
Q ss_pred CCeEEEecCC
Q psy2961 80 KPKLALNCVG 89 (202)
Q Consensus 80 ~~d~vid~~g 89 (202)
++|++|.+.+
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 6899999885
No 278
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=97.66 E-value=0.0018 Score=42.98 Aligned_cols=94 Identities=18% Similarity=0.347 Sum_probs=61.6
Q ss_pred EEEeCCCcHHHHHHHHHHHHCC--CcEEEEecCcccHHHHHHHHHhcCCceEeC--hh---HHHh---------------
Q psy2961 14 VIQNGANSACGQNVIQIARHWG--LKTINIVRNRDDIDKLKSYLKSLGADYVFT--EE---ELRN--------------- 71 (202)
Q Consensus 14 VlI~g~~~~vG~~~i~la~~~g--~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~--~~---~~~~--------------- 71 (202)
|.|+|++|++|..+..+.+... +++++.+...+ .++..++++++.+..+.- +. .+..
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n-~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSN-IEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESST-HHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCC-HHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 6799999999999999999987 68888777553 455678888898887662 21 1111
Q ss_pred --HHHhhCCCCCeEEEecCCCchHHH-HHHhcccCcEEEE
Q psy2961 72 --ISRDASIPKPKLALNCVGGNSATN-LLRTLVSKGVMVT 108 (202)
Q Consensus 72 --~~~~~~~~~~d~vid~~g~~~~~~-~~~~l~~~G~~v~ 108 (202)
+.+.....++|+|+.++.+-.... .+..++.+=++.+
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL 119 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL 119 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence 223333367899999887665544 6777776655443
No 279
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.65 E-value=0.00063 Score=51.44 Aligned_cols=81 Identities=16% Similarity=0.142 Sum_probs=51.5
Q ss_pred CCCCCEEEEeCCC--cHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcCCceEe--C---hhHHHh-HHHhhC-
Q psy2961 8 LSPGDVVIQNGAN--SACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYVF--T---EEELRN-ISRDAS- 77 (202)
Q Consensus 8 ~~~g~~VlI~g~~--~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~v~--~---~~~~~~-~~~~~~- 77 (202)
+-.|.++||+|++ +++|.++++.+...|++|+.+.+++ ...++.+.+ ++++....+ | +++... +.+...
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 3457899999996 7999999999999999988776543 222233333 344532222 2 334443 333222
Q ss_pred CCCCeEEEecCC
Q psy2961 78 IPKPKLALNCVG 89 (202)
Q Consensus 78 ~~~~d~vid~~g 89 (202)
-+.+|++|.++|
T Consensus 86 ~g~iD~lv~nAG 97 (272)
T PRK08159 86 WGKLDFVVHAIG 97 (272)
T ss_pred cCCCcEEEECCc
Confidence 246999999886
No 280
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.65 E-value=0.00073 Score=47.76 Aligned_cols=87 Identities=16% Similarity=0.255 Sum_probs=60.0
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHh-HHHhhCCCCCeEEEec
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKLALNC 87 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~d~vid~ 87 (202)
-.|.+|.|+|.| .+|..+++.++.+|++|++..++... .......+... .++.+ +. ..|+|+.+
T Consensus 34 l~g~tvgIiG~G-~IG~~vA~~l~~fG~~V~~~d~~~~~----~~~~~~~~~~~----~~l~ell~------~aDiv~~~ 98 (178)
T PF02826_consen 34 LRGKTVGIIGYG-RIGRAVARRLKAFGMRVIGYDRSPKP----EEGADEFGVEY----VSLDELLA------QADIVSLH 98 (178)
T ss_dssp STTSEEEEESTS-HHHHHHHHHHHHTT-EEEEEESSCHH----HHHHHHTTEEE----SSHHHHHH------H-SEEEE-
T ss_pred cCCCEEEEEEEc-CCcCeEeeeeecCCceeEEecccCCh----hhhccccccee----eehhhhcc------hhhhhhhh
Confidence 468999999999 99999999999999999999887752 22244444422 23333 32 35888876
Q ss_pred CCC-ch----H-HHHHHhcccCcEEEEEe
Q psy2961 88 VGG-NS----A-TNLLRTLVSKGVMVTYG 110 (202)
Q Consensus 88 ~g~-~~----~-~~~~~~l~~~G~~v~~g 110 (202)
... +. + ...+..|+++..+|.++
T Consensus 99 ~plt~~T~~li~~~~l~~mk~ga~lvN~a 127 (178)
T PF02826_consen 99 LPLTPETRGLINAEFLAKMKPGAVLVNVA 127 (178)
T ss_dssp SSSSTTTTTSBSHHHHHTSTTTEEEEESS
T ss_pred hccccccceeeeeeeeeccccceEEEecc
Confidence 652 22 1 23789999999999876
No 281
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.64 E-value=0.00045 Score=52.17 Aligned_cols=80 Identities=15% Similarity=0.222 Sum_probs=51.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcC--Cc-eEe--C---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLG--AD-YVF--T---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg--~~-~v~--~---~~~~~~-~~~~~~-~~ 79 (202)
++.++||+|++|++|..+++.+...|++|+.+.++.+...+..+.+...+ .. .++ | +++... +.+... .+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 36899999999999999999999999999988877653222223333221 11 111 2 333333 333221 24
Q ss_pred CCeEEEecCC
Q psy2961 80 KPKLALNCVG 89 (202)
Q Consensus 80 ~~d~vid~~g 89 (202)
++|++|.++|
T Consensus 86 ~~d~li~~ag 95 (276)
T PRK05875 86 RLHGVVHCAG 95 (276)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 282
>PRK07775 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.00071 Score=51.14 Aligned_cols=81 Identities=12% Similarity=0.197 Sum_probs=51.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe---C---hhHHHh-HHHhh-CCCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---T---EEELRN-ISRDA-SIPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~-~~~~~ 81 (202)
++.+++|+|++|++|..+++.+...|++|+.++++.+...+..+.++..+..... | +++... +.+.. .-+++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 3468999999999999999988889999888887665322222233334433211 2 333333 33221 11468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 89 d~vi~~Ag~ 97 (274)
T PRK07775 89 EVLVSGAGD 97 (274)
T ss_pred CEEEECCCc
Confidence 999998874
No 283
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.63 E-value=0.00078 Score=50.36 Aligned_cols=80 Identities=20% Similarity=0.329 Sum_probs=51.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE---eC---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FT---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v---~~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.+++|+|+++++|..+++.+...|++|+.+.+++. ..+..+.+...+.+.. .| +++... +.+... .+++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999899999888776542 2222233334443321 12 233333 333221 2469
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 86 d~lv~nAg~ 94 (260)
T PRK12823 86 DVLINNVGG 94 (260)
T ss_pred eEEEECCcc
Confidence 999999873
No 284
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.63 E-value=0.00068 Score=50.26 Aligned_cols=80 Identities=15% Similarity=0.260 Sum_probs=51.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
++.++||+|++|++|..+++.+...|++|+.+.++.+...+..+.+++.+... ++ | .+.... +.+... -.++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999888877654222223333333322 11 2 233333 332211 1468
Q ss_pred eEEEecCC
Q psy2961 82 KLALNCVG 89 (202)
Q Consensus 82 d~vid~~g 89 (202)
|++|.+.|
T Consensus 82 d~vi~~ag 89 (250)
T TIGR03206 82 DVLVNNAG 89 (250)
T ss_pred CEEEECCC
Confidence 99999987
No 285
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.63 E-value=0.00071 Score=50.47 Aligned_cols=79 Identities=15% Similarity=0.254 Sum_probs=51.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE-e--C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-F--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
.|.+++|+|+++++|.++++.+...|++|+.+..... .+..+.+++++.... + | .++... +.+... .+++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999999999999999999999999887654432 223344444543211 1 2 333333 333221 2469
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999999874
No 286
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.62 E-value=0.00039 Score=55.81 Aligned_cols=76 Identities=18% Similarity=0.257 Sum_probs=51.9
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEe
Q psy2961 8 LSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALN 86 (202)
Q Consensus 8 ~~~g~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid 86 (202)
..++++|+|+|+| .+|..+++.++..|+ +++++.++.+. ..+.++.+|.. .++..++.+ .. .++|+||+
T Consensus 177 ~l~~~~VlViGaG-~iG~~~a~~L~~~G~~~V~v~~rs~~r---a~~la~~~g~~-~i~~~~l~~---~l--~~aDvVi~ 246 (417)
T TIGR01035 177 SLKGKKALLIGAG-EMGELVAKHLLRKGVGKILIANRTYER---AEDLAKELGGE-AVKFEDLEE---YL--AEADIVIS 246 (417)
T ss_pred CccCCEEEEECCh-HHHHHHHHHHHHCCCCEEEEEeCCHHH---HHHHHHHcCCe-EeeHHHHHH---HH--hhCCEEEE
Confidence 3568999999997 999999999999995 45555554431 23455667764 334444433 11 36899999
Q ss_pred cCCCchH
Q psy2961 87 CVGGNSA 93 (202)
Q Consensus 87 ~~g~~~~ 93 (202)
|++.+..
T Consensus 247 aT~s~~~ 253 (417)
T TIGR01035 247 STGAPHP 253 (417)
T ss_pred CCCCCCc
Confidence 9987653
No 287
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.62 E-value=0.00083 Score=49.88 Aligned_cols=104 Identities=13% Similarity=0.221 Sum_probs=62.2
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc-cHHHHHHHHHhcCCceE-e--C---hhHHHh-HHHhhC-CCCC
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD-DIDKLKSYLKSLGADYV-F--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~-~~~~~~~~~~~lg~~~v-~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
+.+|||.|++|++|..+++-+...|++++.++++.. ........+++.+.... + | ..+... +.+... -.++
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVA 85 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence 579999999999999999888889999877765432 21112233344443321 1 2 222222 222111 1478
Q ss_pred eEEEecCCCch--------------------------HHHHHHhcccCcEEEEEeccCC
Q psy2961 82 KLALNCVGGNS--------------------------ATNLLRTLVSKGVMVTYGGMSR 114 (202)
Q Consensus 82 d~vid~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~~~ 114 (202)
|++|.++|... ...+++.++..|+++.++....
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (252)
T PRK06077 86 DILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG 144 (252)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence 99999997310 0112445567789999886543
No 288
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.62 E-value=0.00041 Score=44.84 Aligned_cols=96 Identities=18% Similarity=0.232 Sum_probs=58.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHH-HCCCcEEEEecCcccHHHHHHHHHhcCC-ceE-eChhHHHhHHHhhCCCCCeEEEe
Q psy2961 10 PGDVVIQNGANSACGQNVIQIAR-HWGLKTINIVRNRDDIDKLKSYLKSLGA-DYV-FTEEELRNISRDASIPKPKLALN 86 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~-~~g~~vi~~~~~~~~~~~~~~~~~~lg~-~~v-~~~~~~~~~~~~~~~~~~d~vid 86 (202)
||.+||-.|+| .|..++.+++ ..+++++++--+++..+...+.+.+.+. +.+ +-..|+ . .......++|+|+.
T Consensus 1 p~~~vLDlGcG--~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~-~-~~~~~~~~~D~v~~ 76 (112)
T PF12847_consen 1 PGGRVLDLGCG--TGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDA-E-FDPDFLEPFDLVIC 76 (112)
T ss_dssp TTCEEEEETTT--TSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCC-H-GGTTTSSCEEEEEE
T ss_pred CCCEEEEEcCc--CCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECcc-c-cCcccCCCCCEEEE
Confidence 68899999997 5889999999 5788988888777643322333322222 111 111222 1 11111256999998
Q ss_pred cC-CCc----h------HHHHHHhcccCcEEEEE
Q psy2961 87 CV-GGN----S------ATNLLRTLVSKGVMVTY 109 (202)
Q Consensus 87 ~~-g~~----~------~~~~~~~l~~~G~~v~~ 109 (202)
.. ... . +..+.+.|+|+|+++.-
T Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 77 SGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp CSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 77 222 1 23467899999999863
No 289
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.61 E-value=0.001 Score=52.95 Aligned_cols=104 Identities=19% Similarity=0.289 Sum_probs=61.7
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHH---HHHHHHhc-CCceEe-C---hhHHHh-HHHhhCC
Q psy2961 8 LSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDK---LKSYLKSL-GADYVF-T---EEELRN-ISRDASI 78 (202)
Q Consensus 8 ~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~---~~~~~~~l-g~~~v~-~---~~~~~~-~~~~~~~ 78 (202)
...+.+|||+|++|.+|..+++.+...|.+|++++++.+.... ..+..... +...+. | ++++.. +... +
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~--~ 134 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE--G 134 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh--C
Confidence 3557799999999999999999988899999999887642110 01111112 333332 3 233333 3221 1
Q ss_pred CCCeEEEecCCCch-------------HHHHHHhcccC--cEEEEEeccC
Q psy2961 79 PKPKLALNCVGGNS-------------ATNLLRTLVSK--GVMVTYGGMS 113 (202)
Q Consensus 79 ~~~d~vid~~g~~~-------------~~~~~~~l~~~--G~~v~~g~~~ 113 (202)
.++|+||+|++... ...+++.+... +++|.++...
T Consensus 135 ~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~ 184 (390)
T PLN02657 135 DPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAIC 184 (390)
T ss_pred CCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecc
Confidence 26999999886421 11234444333 5788877543
No 290
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.00061 Score=50.74 Aligned_cols=77 Identities=16% Similarity=0.216 Sum_probs=49.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce--E--eC---hhHHHh-HHHhhC-CCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY--V--FT---EEELRN-ISRDAS-IPK 80 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~--v--~~---~~~~~~-~~~~~~-~~~ 80 (202)
.+.+|||+|+++++|..+++.+...|++|+.+.++.+. .+...++.... . .| +++... +.+... ..+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV----AEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGR 89 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 47899999999999999999988899999888876542 22233322111 1 12 233333 222211 146
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
+|++|.++|.
T Consensus 90 ~d~vi~~ag~ 99 (255)
T PRK06841 90 IDILVNSAGV 99 (255)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 291
>PRK05717 oxidoreductase; Validated
Probab=97.60 E-value=0.00061 Score=50.85 Aligned_cols=78 Identities=14% Similarity=0.141 Sum_probs=50.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE-e--C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-F--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
.|.+|+|+|++|++|..+++.+...|++|+.+.++.+. ..+..+.++.... + | ..+... +.+... -+.+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRER---GSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHH---HHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 47899999999999999999998899998887766542 1222334443211 1 2 233333 333221 1468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+.|.
T Consensus 86 d~li~~ag~ 94 (255)
T PRK05717 86 DALVCNAAI 94 (255)
T ss_pred CEEEECCCc
Confidence 999998874
No 292
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.59 E-value=0.00061 Score=49.30 Aligned_cols=101 Identities=15% Similarity=0.149 Sum_probs=63.5
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCC--CcEEEEecCcccHHHHHHHHHhcCCc---eEeChhHHHh-HHHhhC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWG--LKTINIVRNRDDIDKLKSYLKSLGAD---YVFTEEELRN-ISRDAS 77 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g--~~vi~~~~~~~~~~~~~~~~~~lg~~---~v~~~~~~~~-~~~~~~ 77 (202)
+..+++++++||-.|+| .|..++.+++..+ .+|+++..+++......+.++.++.. .++ ..|..+ +..
T Consensus 66 ~~l~~~~~~~VLDiG~G--sG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~-~~d~~~~~~~--- 139 (205)
T PRK13944 66 ELIEPRPGMKILEVGTG--SGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVY-HGDGKRGLEK--- 139 (205)
T ss_pred HhcCCCCCCEEEEECcC--ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEE-ECCcccCCcc---
Confidence 34567889999999987 4778888888764 57888777765322223344445542 122 122222 211
Q ss_pred CCCCeEEEecCCCchHH-HHHHhcccCcEEEEEe
Q psy2961 78 IPKPKLALNCVGGNSAT-NLLRTLVSKGVMVTYG 110 (202)
Q Consensus 78 ~~~~d~vid~~g~~~~~-~~~~~l~~~G~~v~~g 110 (202)
...+|+|+-+....... .+.+.|++||+++...
T Consensus 140 ~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~~ 173 (205)
T PRK13944 140 HAPFDAIIVTAAASTIPSALVRQLKDGGVLVIPV 173 (205)
T ss_pred CCCccEEEEccCcchhhHHHHHhcCcCcEEEEEE
Confidence 25799988766555444 4789999999998743
No 293
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=97.57 E-value=0.00087 Score=49.83 Aligned_cols=80 Identities=16% Similarity=0.193 Sum_probs=50.3
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce--E-eC---hhHHHh-HHHhh-CCCCCe
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY--V-FT---EEELRN-ISRDA-SIPKPK 82 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~--v-~~---~~~~~~-~~~~~-~~~~~d 82 (202)
+.++||+|++|++|..++..+...|++|+.++++.+......+.+...+... + .| ++++.. +.+.. ...++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 3589999999999999998888899999998887653222222223333321 1 12 333333 33321 124689
Q ss_pred EEEecCCC
Q psy2961 83 LALNCVGG 90 (202)
Q Consensus 83 ~vid~~g~ 90 (202)
++|.+.+.
T Consensus 81 ~vi~~a~~ 88 (255)
T TIGR01963 81 ILVNNAGI 88 (255)
T ss_pred EEEECCCC
Confidence 99988864
No 294
>KOG1502|consensus
Probab=97.57 E-value=0.00061 Score=52.19 Aligned_cols=78 Identities=18% Similarity=0.233 Sum_probs=55.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcC-Cc---eEe--ChhHHHhHHHhhCCCCCeE
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLG-AD---YVF--TEEELRNISRDASIPKPKL 83 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg-~~---~v~--~~~~~~~~~~~~~~~~~d~ 83 (202)
.+.+|+|+||+|-+|...+..+...|++|.+++|++++ .++.+.++++. +. .++ |-.+...+.+.. .|.|.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~-~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai--~gcdg 81 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPED-EKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAI--DGCDG 81 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcch-hhhHHHHHhcccCcccceEEeccccccchHHHHH--hCCCE
Confidence 67899999999999999999999999999999999986 33445677764 22 111 111111133333 57899
Q ss_pred EEecCCC
Q psy2961 84 ALNCVGG 90 (202)
Q Consensus 84 vid~~g~ 90 (202)
||.++..
T Consensus 82 VfH~Asp 88 (327)
T KOG1502|consen 82 VFHTASP 88 (327)
T ss_pred EEEeCcc
Confidence 9988763
No 295
>KOG1200|consensus
Probab=97.56 E-value=0.00065 Score=48.00 Aligned_cols=76 Identities=20% Similarity=0.353 Sum_probs=52.5
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCC--ceE-e--C---hhHHHh-HHHhhCC-CC
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA--DYV-F--T---EEELRN-ISRDASI-PK 80 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~--~~v-~--~---~~~~~~-~~~~~~~-~~ 80 (202)
...++|.|+++++|.+..|.....|+++.+.....+. ..+.++.++. ++. + | .++... +.+.... +.
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~---A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ 90 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAA---AEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGT 90 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhh---HHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence 3567899999999999999999999998887766543 4555666655 222 1 2 334333 3333221 36
Q ss_pred CeEEEecCC
Q psy2961 81 PKLALNCVG 89 (202)
Q Consensus 81 ~d~vid~~g 89 (202)
++++++|.|
T Consensus 91 psvlVncAG 99 (256)
T KOG1200|consen 91 PSVLVNCAG 99 (256)
T ss_pred CcEEEEcCc
Confidence 899999998
No 296
>PRK07102 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.00099 Score=49.30 Aligned_cols=77 Identities=17% Similarity=0.211 Sum_probs=48.8
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce--Ee--C---hhHHHh-HHHhhCCCCCeE
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY--VF--T---EEELRN-ISRDASIPKPKL 83 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~--v~--~---~~~~~~-~~~~~~~~~~d~ 83 (202)
.+++|+|++|++|..+++.+...|++|+.+.++++..++..+.+...+... ++ | +.+... +.+.. ..+|+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~--~~~d~ 79 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP--ALPDI 79 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh--hcCCE
Confidence 579999999999999999998999999998887654222222222222111 11 2 233333 33322 35799
Q ss_pred EEecCCC
Q psy2961 84 ALNCVGG 90 (202)
Q Consensus 84 vid~~g~ 90 (202)
++.++|.
T Consensus 80 vv~~ag~ 86 (243)
T PRK07102 80 VLIAVGT 86 (243)
T ss_pred EEECCcC
Confidence 9987764
No 297
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.56 E-value=0.001 Score=49.99 Aligned_cols=79 Identities=16% Similarity=0.252 Sum_probs=49.6
Q ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHh-cCCceEe--C---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGANS--ACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADYVF--T---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~--~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~-lg~~~v~--~---~~~~~~-~~~~~~-~~ 79 (202)
.|.+++|+|+++ ++|.++++.+...|++|+.+.+++ ...+..+.+.. .+....+ | +++... +.+... -+
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 478999999985 899999999888999988766553 22223333322 2322222 2 344444 433322 14
Q ss_pred CCeEEEecCC
Q psy2961 80 KPKLALNCVG 89 (202)
Q Consensus 80 ~~d~vid~~g 89 (202)
.+|++|+++|
T Consensus 84 ~iD~linnAg 93 (262)
T PRK07984 84 KFDGFVHSIG 93 (262)
T ss_pred CCCEEEECCc
Confidence 6999999987
No 298
>PRK06484 short chain dehydrogenase; Validated
Probab=97.56 E-value=0.0006 Score=56.34 Aligned_cols=78 Identities=22% Similarity=0.268 Sum_probs=52.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE---eC---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV---FT---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v---~~---~~~~~~-~~~~~~-~~~~ 81 (202)
.|.+++|+|+++++|.++++.+...|++|+.+.++.+.. .+..++++.... .| +++... +.+... .+++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERA---RERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 578999999999999999999999999999888776531 233344554321 23 333333 333221 1469
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+.|.
T Consensus 81 D~li~nag~ 89 (520)
T PRK06484 81 DVLVNNAGV 89 (520)
T ss_pred CEEEECCCc
Confidence 999998874
No 299
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=97.56 E-value=0.00092 Score=51.66 Aligned_cols=77 Identities=18% Similarity=0.137 Sum_probs=49.1
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-CcEEEEecCcccHHHHHHHHHhcC---Cc-eE--eC---hhHHHh-HHHhhC-C
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWG-LKTINIVRNRDDIDKLKSYLKSLG---AD-YV--FT---EEELRN-ISRDAS-I 78 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g-~~vi~~~~~~~~~~~~~~~~~~lg---~~-~v--~~---~~~~~~-~~~~~~-~ 78 (202)
+.+++|+|+++++|..+++.+...| ++|+.++++.+... +..+++. .. .+ .| .++... +.+... .
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~---~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAE---QAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG 79 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHH---HHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 5799999999999999998888889 88888887765322 2223332 11 11 13 233333 333211 2
Q ss_pred CCCeEEEecCCC
Q psy2961 79 PKPKLALNCVGG 90 (202)
Q Consensus 79 ~~~d~vid~~g~ 90 (202)
+++|++|.++|.
T Consensus 80 ~~iD~lI~nAG~ 91 (314)
T TIGR01289 80 RPLDALVCNAAV 91 (314)
T ss_pred CCCCEEEECCCc
Confidence 469999998873
No 300
>KOG1207|consensus
Probab=97.55 E-value=0.00021 Score=49.46 Aligned_cols=77 Identities=19% Similarity=0.242 Sum_probs=50.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCC---ceEeChhHHHhHHH-hhCCCCCeEEE
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA---DYVFTEEELRNISR-DASIPKPKLAL 85 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~---~~v~~~~~~~~~~~-~~~~~~~d~vi 85 (202)
.|..|++.|++.++|...++-+...|++||+++++++. .....++... ..+.|-.+++.+.+ ...-..+|..+
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~---L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLV 82 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEAN---LLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLV 82 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHH---HHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhh
Confidence 68899999999999999999999999999999999874 2233333322 11223344444222 22223456666
Q ss_pred ecCC
Q psy2961 86 NCVG 89 (202)
Q Consensus 86 d~~g 89 (202)
+..|
T Consensus 83 NNAg 86 (245)
T KOG1207|consen 83 NNAG 86 (245)
T ss_pred ccch
Confidence 6555
No 301
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.55 E-value=0.00085 Score=50.25 Aligned_cols=80 Identities=10% Similarity=0.215 Sum_probs=49.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCccc-HHHHHHHHHh-cCCce-Ee--C---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-IDKLKSYLKS-LGADY-VF--T---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~-~~~~~~~~~~-lg~~~-v~--~---~~~~~~-~~~~~~-~~ 79 (202)
.|++++|+|+++++|.++++.+...|++|+.+.++.++ ..+..+.++. .+... .+ | +++... +.+... -+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999998877654432 1111122222 23221 11 2 334433 332211 14
Q ss_pred CCeEEEecCC
Q psy2961 80 KPKLALNCVG 89 (202)
Q Consensus 80 ~~d~vid~~g 89 (202)
.+|++|.++|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 6899999875
No 302
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.00053 Score=51.05 Aligned_cols=76 Identities=13% Similarity=0.181 Sum_probs=48.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE-eChhHHHhHHHhhCCCCCeEEEecC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEELRNISRDASIPKPKLALNCV 88 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~~~~~d~vid~~ 88 (202)
.|.+++|+|++|++|..+++.+...|++|+.+.+++.. ..+.........+ .|-.+..++.+.. +++|++|+++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~--~~iDilVnnA 87 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKIN---NSESNDESPNEWIKWECGKEESLDKQL--ASLDVLILNH 87 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchh---hhhhhccCCCeEEEeeCCCHHHHHHhc--CCCCEEEECC
Confidence 36899999999999999999999999999988876521 1121111111111 1322222233333 4699999998
Q ss_pred CC
Q psy2961 89 GG 90 (202)
Q Consensus 89 g~ 90 (202)
|.
T Consensus 88 G~ 89 (245)
T PRK12367 88 GI 89 (245)
T ss_pred cc
Confidence 74
No 303
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.55 E-value=0.0004 Score=48.62 Aligned_cols=98 Identities=17% Similarity=0.244 Sum_probs=63.4
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeC-------------------hhHHHh
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFT-------------------EEELRN 71 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~-------------------~~~~~~ 71 (202)
.-+|+|.|+| .+|..|+++++.+|++++......+ +.+..+.++...+.. +.....
T Consensus 20 p~~vvv~G~G-~vg~gA~~~~~~lGa~v~~~d~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (168)
T PF01262_consen 20 PAKVVVTGAG-RVGQGAAEIAKGLGAEVVVPDERPE----RLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYES 94 (168)
T ss_dssp T-EEEEESTS-HHHHHHHHHHHHTT-EEEEEESSHH----HHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHH
T ss_pred CeEEEEECCC-HHHHHHHHHHhHCCCEEEeccCCHH----HHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHH
Confidence 3788999988 9999999999999999988876654 456666666654332 122223
Q ss_pred -HHHhhCCCCCeEEEecC---C--Cch--HHHHHHhcccCcEEEEEeccCCC
Q psy2961 72 -ISRDASIPKPKLALNCV---G--GNS--ATNLLRTLVSKGVMVTYGGMSRE 115 (202)
Q Consensus 72 -~~~~~~~~~~d~vid~~---g--~~~--~~~~~~~l~~~G~~v~~g~~~~~ 115 (202)
+.+.. ..+|++|-+. + .+. ..+.++.|+++..++.+....+.
T Consensus 95 ~f~~~i--~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~gG 144 (168)
T PF01262_consen 95 NFAEFI--APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQGG 144 (168)
T ss_dssp HHHHHH--HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT-
T ss_pred HHHHHH--hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCCC
Confidence 33333 4568888543 1 122 23478899999999998755443
No 304
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=97.55 E-value=0.00089 Score=49.32 Aligned_cols=73 Identities=16% Similarity=0.250 Sum_probs=56.2
Q ss_pred EEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-ChhHHHhHHHhhCCCCCeEEEecCCC
Q psy2961 14 VIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRNISRDASIPKPKLALNCVGG 90 (202)
Q Consensus 14 VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~d~vid~~g~ 90 (202)
|+|+|++|.+|..+++.+...+.+|.+.+++.++ ...+.+++.|+..+. |+.+.+.+.+.. .|+|.||.+++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~g~~vv~~d~~~~~~l~~al--~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQALGAEVVEADYDDPESLVAAL--KGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHTTTEEEES-TT-HHHHHHHH--TTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcccceEeecccCCHHHHHHHH--cCCceEEeecCc
Confidence 7899999999999999999999999999988742 346677888987665 344444455555 689999998883
No 305
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=97.53 E-value=0.0012 Score=49.00 Aligned_cols=81 Identities=19% Similarity=0.246 Sum_probs=50.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCc-ccHHHHHHHHHhcCCceE-e--C---hhHHHh-HHHhhC-CCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR-DDIDKLKSYLKSLGADYV-F--T---EEELRN-ISRDAS-IPK 80 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~-~~~~~~~~~~~~lg~~~v-~--~---~~~~~~-~~~~~~-~~~ 80 (202)
.+.+++|+|++|++|..+++.+...|++++.+.++. +...+..+.+++.+.+.. + | ++.+.. +.+... -+.
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 368999999999999999998888999988765543 221112233334443321 1 2 233333 333221 146
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
+|++|.++|.
T Consensus 85 id~vi~~ag~ 94 (247)
T PRK12935 85 VDILVNNAGI 94 (247)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 306
>PLN02253 xanthoxin dehydrogenase
Probab=97.53 E-value=0.00078 Score=51.00 Aligned_cols=78 Identities=18% Similarity=0.322 Sum_probs=49.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCC--c-eEe--C---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA--D-YVF--T---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~--~-~v~--~---~~~~~~-~~~~~~-~~ 79 (202)
.+.+++|+|+++++|.++++.+...|++|+.+.++++.. .+...+++. . ..+ | .++..+ +..... .+
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLG---QNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG 93 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence 467999999999999999988888999998887665431 122233321 1 111 2 233333 332211 14
Q ss_pred CCeEEEecCCC
Q psy2961 80 KPKLALNCVGG 90 (202)
Q Consensus 80 ~~d~vid~~g~ 90 (202)
++|++|.++|.
T Consensus 94 ~id~li~~Ag~ 104 (280)
T PLN02253 94 TLDIMVNNAGL 104 (280)
T ss_pred CCCEEEECCCc
Confidence 69999998863
No 307
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.52 E-value=0.0012 Score=49.34 Aligned_cols=80 Identities=13% Similarity=0.138 Sum_probs=50.0
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHh-cCCceE--e--C---hhHHHh-HHHhhC-CCC
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADYV--F--T---EEELRN-ISRDAS-IPK 80 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~-lg~~~v--~--~---~~~~~~-~~~~~~-~~~ 80 (202)
+.+|||+|+++++|..+++.+...|++++.+.++.+...+..+.++. .+...+ + | +++... +.+... -.+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 56899999999999999999988999998888776532222222222 221111 1 2 233333 322211 147
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
+|++|.+.|.
T Consensus 82 id~vv~~ag~ 91 (259)
T PRK12384 82 VDLLVYNAGI 91 (259)
T ss_pred CCEEEECCCc
Confidence 8999999873
No 308
>PRK07074 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.00089 Score=49.96 Aligned_cols=77 Identities=14% Similarity=0.182 Sum_probs=48.5
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcC---CceE-eC---hhHHHh-HHHhhC-CCCC
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLG---ADYV-FT---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg---~~~v-~~---~~~~~~-~~~~~~-~~~~ 81 (202)
+.+++|+|++|++|..++..+...|++++.+.++.+.. .+..+.+. ...+ .| .++... +.+... -+++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAAL---AAFADALGDARFVPVACDLTDAASLAAALANAAAERGPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999988888999998888776532 12222222 1111 12 233333 322211 1468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+.|.
T Consensus 79 d~vi~~ag~ 87 (257)
T PRK07074 79 DVLVANAGA 87 (257)
T ss_pred CEEEECCCC
Confidence 999999874
No 309
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=97.51 E-value=0.0012 Score=49.18 Aligned_cols=79 Identities=14% Similarity=0.221 Sum_probs=50.3
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE-e--C---hhHHHh-HHHhhC-CCCCeE
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-F--T---EEELRN-ISRDAS-IPKPKL 83 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~--~---~~~~~~-~~~~~~-~~~~d~ 83 (202)
.+++|.|++|++|..+++.+...|++++.+.++++...+..+.++..+.... + | +++... +.+... .+.+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3789999999999999999889999998888775432222233344443221 1 2 233333 332211 246899
Q ss_pred EEecCCC
Q psy2961 84 ALNCVGG 90 (202)
Q Consensus 84 vid~~g~ 90 (202)
+|.+.|.
T Consensus 81 vi~~ag~ 87 (254)
T TIGR02415 81 MVNNAGV 87 (254)
T ss_pred EEECCCc
Confidence 9998874
No 310
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.0011 Score=48.30 Aligned_cols=75 Identities=19% Similarity=0.243 Sum_probs=50.2
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-C---hhHHHhHHHhhCCCCCeEEEec
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-T---EEELRNISRDASIPKPKLALNC 87 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~---~~~~~~~~~~~~~~~~d~vid~ 87 (202)
.+++|+|++|++|..+++.+...|++++.+.++.+ ..+.++..+...+. | .+++..+.+...+.++|++|.+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ 77 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAA----ALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYV 77 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHH----HHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEEC
Confidence 47999999999999999888888999988887754 34445445544222 2 2333332222333579999998
Q ss_pred CCC
Q psy2961 88 VGG 90 (202)
Q Consensus 88 ~g~ 90 (202)
.|.
T Consensus 78 ag~ 80 (222)
T PRK06953 78 AGV 80 (222)
T ss_pred CCc
Confidence 864
No 311
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.51 E-value=0.0017 Score=46.55 Aligned_cols=81 Identities=11% Similarity=0.155 Sum_probs=48.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHH-hcCCceEe-ChhHHHhHHHhhCCCCCeEEEec
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK-SLGADYVF-TEEELRNISRDASIPKPKLALNC 87 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~-~lg~~~v~-~~~~~~~~~~~~~~~~~d~vid~ 87 (202)
.+.+++|+|++|++|..+++.+...|++++.+.++.++..+-.+.+. ..+..... +..+..++.+.. .+.|+||.+
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~diVi~a 104 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAI--KGADVVFAA 104 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHH--hcCCEEEEC
Confidence 56899999998899999888888889888887766543211111121 12332211 222222222222 467999998
Q ss_pred CCCch
Q psy2961 88 VGGNS 92 (202)
Q Consensus 88 ~g~~~ 92 (202)
++...
T Consensus 105 t~~g~ 109 (194)
T cd01078 105 GAAGV 109 (194)
T ss_pred CCCCc
Confidence 87655
No 312
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=97.50 E-value=0.0013 Score=49.16 Aligned_cols=81 Identities=17% Similarity=0.272 Sum_probs=50.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCccc-HHHHHHHHHhcCCceE-e--C---hhHHHh-HHHhhC-CCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-IDKLKSYLKSLGADYV-F--T---EEELRN-ISRDAS-IPK 80 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~-~~~~~~~~~~lg~~~v-~--~---~~~~~~-~~~~~~-~~~ 80 (202)
.+.+++|+|+++++|..+++.+...|++++.+.++... ..+..+.++..+.... + | ..+... +..... .++
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999998887765432 1112223333443311 1 2 233333 322211 246
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
+|++|.+.|.
T Consensus 86 id~lv~~ag~ 95 (261)
T PRK08936 86 LDVMINNAGI 95 (261)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 313
>PRK05855 short chain dehydrogenase; Validated
Probab=97.50 E-value=0.00095 Score=55.69 Aligned_cols=81 Identities=15% Similarity=0.207 Sum_probs=53.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.++||+|++|++|..+++.+...|++|+.+.++.+..++..+.+++.|..... | ++.... +.+... .+.+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4578999999999999999988899999888887765432223334444542211 2 233333 333221 2469
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|+++|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999999874
No 314
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.00095 Score=56.76 Aligned_cols=81 Identities=19% Similarity=0.253 Sum_probs=53.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~~~ 81 (202)
.|.+++|+|++|++|..+++.+...|++|+.+.++++...+..+.++..+....+ | .++... +.+... -+++
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 449 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV 449 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 3678999999999999999988889999999988776433333333333432211 2 334443 333221 2468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 450 d~li~~Ag~ 458 (657)
T PRK07201 450 DYLVNNAGR 458 (657)
T ss_pred CEEEECCCC
Confidence 999999873
No 315
>PRK08226 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.0014 Score=49.12 Aligned_cols=80 Identities=20% Similarity=0.267 Sum_probs=50.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce--E-eC---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY--V-FT---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~--v-~~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.+++|+|+++++|..+++.+...|++|+.+.++.+ ..+..+.+...+... + .| .++... +.+... ...+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999998889999888876653 222222333333321 1 12 233333 332211 2468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+.|.
T Consensus 84 d~vi~~ag~ 92 (263)
T PRK08226 84 DILVNNAGV 92 (263)
T ss_pred CEEEECCCc
Confidence 999998883
No 316
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.0013 Score=48.69 Aligned_cols=79 Identities=16% Similarity=0.189 Sum_probs=49.5
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhc--CCce-Ee--C---hhHHHh-HHHhhC-CCC
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL--GADY-VF--T---EEELRN-ISRDAS-IPK 80 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~l--g~~~-v~--~---~~~~~~-~~~~~~-~~~ 80 (202)
+.+++|+|+++++|..+++.+...|++|+.+.++++..++..+.+... +... ++ | .++... +.+... -++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999888888999988887765422222222222 2211 11 2 233333 333211 246
Q ss_pred CeEEEecCC
Q psy2961 81 PKLALNCVG 89 (202)
Q Consensus 81 ~d~vid~~g 89 (202)
+|++|.++|
T Consensus 82 id~vi~~ag 90 (248)
T PRK08251 82 LDRVIVNAG 90 (248)
T ss_pred CCEEEECCC
Confidence 899999886
No 317
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=97.49 E-value=0.0024 Score=49.12 Aligned_cols=35 Identities=11% Similarity=0.105 Sum_probs=30.7
Q ss_pred CCCEEEEeCC--CcHHHHHHHHHHHHCCCcEEEEecCc
Q psy2961 10 PGDVVIQNGA--NSACGQNVIQIARHWGLKTINIVRNR 45 (202)
Q Consensus 10 ~g~~VlI~g~--~~~vG~~~i~la~~~g~~vi~~~~~~ 45 (202)
.|+++||+|+ ++|+|.++++.+...|++|+. ++..
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~ 44 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWV 44 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCc
Confidence 5889999999 789999999999999999888 4443
No 318
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.0011 Score=48.59 Aligned_cols=72 Identities=19% Similarity=0.215 Sum_probs=47.9
Q ss_pred EEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-C---hhHHHh-HHHhhCCCCCeEEEec
Q psy2961 13 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-T---EEELRN-ISRDASIPKPKLALNC 87 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~---~~~~~~-~~~~~~~~~~d~vid~ 87 (202)
+++|+|+++++|..+++.+...|++|+.+.++.++. .+..++++...+. | +++..+ +.... ..+|++|.+
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~---~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~--~~id~lv~~ 76 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDL---EVAAKELDVDAIVCDNTDPASLEEARGLFP--HHLDTIVNV 76 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHhccCcEEecCCCCHHHHHHHHHHHh--hcCcEEEEC
Confidence 589999999999999999988999998887766431 1222344444332 2 334444 33332 268999987
Q ss_pred CC
Q psy2961 88 VG 89 (202)
Q Consensus 88 ~g 89 (202)
.|
T Consensus 77 ag 78 (223)
T PRK05884 77 PA 78 (223)
T ss_pred CC
Confidence 65
No 319
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.48 E-value=0.0011 Score=49.73 Aligned_cols=80 Identities=13% Similarity=0.196 Sum_probs=48.7
Q ss_pred CCCEEEEeCC--CcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcCCceEe--C---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGA--NSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYVF--T---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~--~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~v~--~---~~~~~~-~~~~~~-~~ 79 (202)
.+.+++|+|+ ++++|.++++.+...|++|+.+.+... ..++.+.+ ++++....+ | +++... +..... .+
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 4789999996 569999999988889999887643321 11233333 334432222 2 334443 333221 15
Q ss_pred CCeEEEecCCC
Q psy2961 80 KPKLALNCVGG 90 (202)
Q Consensus 80 ~~d~vid~~g~ 90 (202)
.+|++|+++|.
T Consensus 84 ~iD~lvnnAG~ 94 (260)
T PRK06997 84 GLDGLVHSIGF 94 (260)
T ss_pred CCcEEEEcccc
Confidence 79999998863
No 320
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.47 E-value=0.019 Score=43.98 Aligned_cols=94 Identities=18% Similarity=0.296 Sum_probs=68.6
Q ss_pred CCEEEEeCCCcHHHHHHHHHHH--HCCCcEEEEecCcccHHHHHHHHHhcCC-ceEeChhHHHhHHHhhCCCCCeEEEec
Q psy2961 11 GDVVIQNGANSACGQNVIQIAR--HWGLKTINIVRNRDDIDKLKSYLKSLGA-DYVFTEEELRNISRDASIPKPKLALNC 87 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~--~~g~~vi~~~~~~~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~~~~~d~vid~ 87 (202)
.+.|+|..|+|-+++.++.+++ .-+.++|.+++..+ ....+.+|+ +.|+.|+++..+.. ..--+++|.
T Consensus 136 a~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N-----~~Fve~lg~Yd~V~~Yd~i~~l~~----~~~~v~VDf 206 (314)
T PF11017_consen 136 AAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARN-----VAFVESLGCYDEVLTYDDIDSLDA----PQPVVIVDF 206 (314)
T ss_pred ccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcc-----hhhhhccCCceEEeehhhhhhccC----CCCEEEEEC
Confidence 4688999999999999998888 44568999998876 578899986 78888887654211 345689999
Q ss_pred CCCchHHH-HHHhcccCc-EEEEEeccC
Q psy2961 88 VGGNSATN-LLRTLVSKG-VMVTYGGMS 113 (202)
Q Consensus 88 ~g~~~~~~-~~~~l~~~G-~~v~~g~~~ 113 (202)
.|+..... +-+.++..= ..+.+|..+
T Consensus 207 aG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 207 AGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred CCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 99988765 444554432 456666444
No 321
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=97.47 E-value=0.00091 Score=48.78 Aligned_cols=102 Identities=21% Similarity=0.251 Sum_probs=63.2
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC--cEEEEecCcccHHHHHHHHHhcCCceEe-ChhHHHh-HHHhhCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGL--KTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRN-ISRDASIP 79 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~--~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~-~~~~~~~~ 79 (202)
+...++++++||-.|+| .|..++.+++..+. +|+++-.+++-.+...+.++++|.+.+. ...|..+ .. ...
T Consensus 71 ~~l~~~~~~~VLDiG~G--sG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~~---~~~ 145 (215)
T TIGR00080 71 ELLELKPGMKVLEIGTG--SGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWE---PLA 145 (215)
T ss_pred HHhCCCCcCEEEEECCC--ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCCc---ccC
Confidence 34567899999999987 57788888887654 5777776665433333444556653221 1122211 11 124
Q ss_pred CCeEEEecCCCchHH-HHHHhcccCcEEEEEe
Q psy2961 80 KPKLALNCVGGNSAT-NLLRTLVSKGVMVTYG 110 (202)
Q Consensus 80 ~~d~vid~~g~~~~~-~~~~~l~~~G~~v~~g 110 (202)
.||+|+-+...+... .+.+.|++||+++..-
T Consensus 146 ~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~~ 177 (215)
T TIGR00080 146 PYDRIYVTAAGPKIPEALIDQLKEGGILVMPV 177 (215)
T ss_pred CCCEEEEcCCcccccHHHHHhcCcCcEEEEEE
Confidence 799887554444433 4778999999988753
No 322
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.47 E-value=0.0056 Score=44.30 Aligned_cols=92 Identities=12% Similarity=0.090 Sum_probs=59.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 89 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~g 89 (202)
.|.+|||.|+| .+|..-++.+...|++|++++..... ....+.+.|.-..+. .++.. ... .++|+||-+++
T Consensus 8 ~gk~vlVvGgG-~va~rk~~~Ll~~ga~VtVvsp~~~~---~l~~l~~~~~i~~~~-~~~~~--~dl--~~~~lVi~at~ 78 (205)
T TIGR01470 8 EGRAVLVVGGG-DVALRKARLLLKAGAQLRVIAEELES---ELTLLAEQGGITWLA-RCFDA--DIL--EGAFLVIAATD 78 (205)
T ss_pred CCCeEEEECcC-HHHHHHHHHHHHCCCEEEEEcCCCCH---HHHHHHHcCCEEEEe-CCCCH--HHh--CCcEEEEECCC
Confidence 46799999999 99999999999999988877654331 233333333222221 11111 001 57899999999
Q ss_pred CchHHH-HHHhcccCcEEEEEe
Q psy2961 90 GNSATN-LLRTLVSKGVMVTYG 110 (202)
Q Consensus 90 ~~~~~~-~~~~l~~~G~~v~~g 110 (202)
.+.... +....+..|..|.+.
T Consensus 79 d~~ln~~i~~~a~~~~ilvn~~ 100 (205)
T TIGR01470 79 DEELNRRVAHAARARGVPVNVV 100 (205)
T ss_pred CHHHHHHHHHHHHHcCCEEEEC
Confidence 886654 566666778777655
No 323
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.46 E-value=0.00069 Score=54.07 Aligned_cols=76 Identities=17% Similarity=0.226 Sum_probs=49.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcC--CceE-eChhHHHhHHHhhCCCCCeEEEe
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLG--ADYV-FTEEELRNISRDASIPKPKLALN 86 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg--~~~v-~~~~~~~~~~~~~~~~~~d~vid 86 (202)
.|++|+|+|++|++|.++++.+...|++|+.+.++++.. .+.....+ ...+ .|-.+...+.+.. +++|++|.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l---~~~~~~~~~~v~~v~~Dvsd~~~v~~~l--~~IDiLIn 251 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKI---TLEINGEDLPVKTLHWQVGQEAALAELL--EKVDILII 251 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHhhcCCCeEEEEeeCCCHHHHHHHh--CCCCEEEE
Confidence 478999999999999999998888999999888766431 11122111 1111 1322322233333 46999998
Q ss_pred cCCC
Q psy2961 87 CVGG 90 (202)
Q Consensus 87 ~~g~ 90 (202)
+.|.
T Consensus 252 nAGi 255 (406)
T PRK07424 252 NHGI 255 (406)
T ss_pred CCCc
Confidence 8763
No 324
>KOG1610|consensus
Probab=97.46 E-value=0.0044 Score=47.04 Aligned_cols=107 Identities=14% Similarity=0.141 Sum_probs=69.6
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce-EeC---hhH---HHh-HHHhhCCCC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VFT---EEE---LRN-ISRDASIPK 80 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-v~~---~~~---~~~-~~~~~~~~~ 80 (202)
.++..|+|+|+-+|.|..++.-+...|..|++.|-.++..+......++-.... .+| +++ ... +++.....+
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 456779999999999999999999999999999977664222122221101111 122 333 333 666777778
Q ss_pred CeEEEecCCCc---------------------------hHHHHHHhccc-CcEEEEEeccCCC
Q psy2961 81 PKLALNCVGGN---------------------------SATNLLRTLVS-KGVMVTYGGMSRE 115 (202)
Q Consensus 81 ~d~vid~~g~~---------------------------~~~~~~~~l~~-~G~~v~~g~~~~~ 115 (202)
...+|+++|-. .+..++.++++ .||+|.+++..+.
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR 169 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR 169 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence 99999999821 11223445544 5999999877664
No 325
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.0014 Score=48.77 Aligned_cols=36 Identities=22% Similarity=0.273 Sum_probs=29.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEe-cCc
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIV-RNR 45 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~-~~~ 45 (202)
.+.+++|+|++|++|..+++.+...|++++... ++.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~ 41 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNK 41 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 357999999999999999998888999887654 443
No 326
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.44 E-value=0.0021 Score=47.41 Aligned_cols=81 Identities=15% Similarity=0.231 Sum_probs=50.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccH-HHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDI-DKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IPK 80 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~-~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~~ 80 (202)
.+.+++|+|++|++|..+++.+...|++|+++.++.+.. ....+.++..+..... | ..++.. +.+... -.+
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 357899999999999999999999999987877765421 1112223333333221 2 222333 222211 146
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
+|.+|.++|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 327
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.44 E-value=0.0023 Score=48.39 Aligned_cols=95 Identities=17% Similarity=0.159 Sum_probs=56.6
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCV 88 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~ 88 (202)
..+.+++|.|+| ++|.+++..+...|++++++.++.++.++..+.+...+........+. ....+|+||+|+
T Consensus 115 ~~~k~vliiGaG-g~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~-------~~~~~DivInat 186 (270)
T TIGR00507 115 RPNQRVLIIGAG-GAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMDEL-------PLHRVDLIINAT 186 (270)
T ss_pred ccCCEEEEEcCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechhhh-------cccCccEEEECC
Confidence 457899999997 899998888888898777766665432111222222232222221110 113689999999
Q ss_pred CCchHH-----H-HHHhcccCcEEEEEec
Q psy2961 89 GGNSAT-----N-LLRTLVSKGVMVTYGG 111 (202)
Q Consensus 89 g~~~~~-----~-~~~~l~~~G~~v~~g~ 111 (202)
+..... . ....++++..++.+..
T Consensus 187 p~gm~~~~~~~~~~~~~l~~~~~v~D~~y 215 (270)
T TIGR00507 187 SAGMSGNIDEPPVPAEKLKEGMVVYDMVY 215 (270)
T ss_pred CCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence 753211 1 2456777777777753
No 328
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=97.43 E-value=0.0033 Score=46.53 Aligned_cols=162 Identities=17% Similarity=0.190 Sum_probs=91.7
Q ss_pred CCC--cHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcCCceEe--C---hhHHHh-HHHhhCC--CCCeEEEe
Q psy2961 18 GAN--SACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYVF--T---EEELRN-ISRDASI--PKPKLALN 86 (202)
Q Consensus 18 g~~--~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~v~--~---~~~~~~-~~~~~~~--~~~d~vid 86 (202)
|++ +++|.++++.+...|++|+.+.++.++.....+.+ ++.+.+ ++ | +++... +.+.... +.+|++|.
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~ 79 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGRIDILVN 79 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence 555 89999999999999999999998887533333344 445654 34 2 334333 3332221 57999998
Q ss_pred cCCCch------------------------------HHHHHHhcccCcEEEEEeccCCCCcCCC----------------
Q psy2961 87 CVGGNS------------------------------ATNLLRTLVSKGVMVTYGGMSREPVQIP---------------- 120 (202)
Q Consensus 87 ~~g~~~------------------------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~---------------- 120 (202)
+.+... ...+.+.|+++|+++.++..........
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r 159 (241)
T PF13561_consen 80 NAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLTR 159 (241)
T ss_dssp EEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHH
T ss_pred cccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHHH
Confidence 764211 1113456788899999876544322111
Q ss_pred --cccccc-cCeeEEEEechhHhhhcccHHHHHHHHHHHHHHHHcCCCCCCcceeechhhHHHHHHHHh
Q psy2961 121 --TSAFIF-KDITLRGHWMTRWQKENKESAERKSMMNELTEMMRTGKLAAPAHKFVTLKNFQEALMNTM 186 (202)
Q Consensus 121 --~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~ 186 (202)
..++-. +++++-............ .. ....++..+.+.+. .+..+....+++.++...+.
T Consensus 160 ~lA~el~~~~gIrVN~V~pG~i~t~~~--~~-~~~~~~~~~~~~~~---~pl~r~~~~~evA~~v~fL~ 222 (241)
T PF13561_consen 160 SLAKELAPKKGIRVNAVSPGPIETPMT--ER-IPGNEEFLEELKKR---IPLGRLGTPEEVANAVLFLA 222 (241)
T ss_dssp HHHHHHGGHGTEEEEEEEESSBSSHHH--HH-HHTHHHHHHHHHHH---STTSSHBEHHHHHHHHHHHH
T ss_pred HHHHHhccccCeeeeeecccceeccch--hc-cccccchhhhhhhh---hccCCCcCHHHHHHHHHHHh
Confidence 122334 577777666443222110 00 11123333333321 23334467889999998887
No 329
>PRK12744 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.0021 Score=47.98 Aligned_cols=81 Identities=23% Similarity=0.364 Sum_probs=49.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCccc----HHHHHHHHHhcCCceE-e--C---hhHHHh-HHHhhC-
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD----IDKLKSYLKSLGADYV-F--T---EEELRN-ISRDAS- 77 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~----~~~~~~~~~~lg~~~v-~--~---~~~~~~-~~~~~~- 77 (202)
.+.+++|+|+++++|..+++.+...|++++.++++.+. .++..+.++..+.... + | +++... +.+...
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 46799999999999999999998899997777654321 1111222333343311 1 2 333333 332211
Q ss_pred CCCCeEEEecCCC
Q psy2961 78 IPKPKLALNCVGG 90 (202)
Q Consensus 78 ~~~~d~vid~~g~ 90 (202)
.+++|++|.++|.
T Consensus 87 ~~~id~li~~ag~ 99 (257)
T PRK12744 87 FGRPDIAINTVGK 99 (257)
T ss_pred hCCCCEEEECCcc
Confidence 2468999999874
No 330
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.43 E-value=0.0014 Score=48.88 Aligned_cols=78 Identities=13% Similarity=0.166 Sum_probs=49.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE-e--C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-F--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.++||+|+++++|..+++.+...|++|+.+.++.+.. .+...+++.... + | .++... +.+... .+++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARA---RLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHH---HHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 367899999999999999999999999999888776531 122223332211 1 2 233333 332211 1468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+.|.
T Consensus 82 d~li~~ag~ 90 (257)
T PRK07067 82 DILFNNAAL 90 (257)
T ss_pred CEEEECCCc
Confidence 999998863
No 331
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=97.42 E-value=0.0018 Score=47.75 Aligned_cols=79 Identities=14% Similarity=0.204 Sum_probs=47.3
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCccc-HHHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhhC-CCCCe
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-IDKLKSYLKSLGADY-VF--T---EEELRN-ISRDAS-IPKPK 82 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~-~~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~~-~~~~d 82 (202)
+++||+|++|++|..+++.+...|++++.+.++... ..+..+.....+... ++ | +.++.. +.+... ...+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 478999999999999999999999999888873321 111111122222221 11 2 233333 332211 24689
Q ss_pred EEEecCCC
Q psy2961 83 LALNCVGG 90 (202)
Q Consensus 83 ~vid~~g~ 90 (202)
++|.+.|.
T Consensus 81 ~vi~~ag~ 88 (242)
T TIGR01829 81 VLVNNAGI 88 (242)
T ss_pred EEEECCCC
Confidence 99999874
No 332
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.001 Score=50.05 Aligned_cols=74 Identities=15% Similarity=0.246 Sum_probs=49.3
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe----ChhHHHh-HHHhhC-CCCCeEE
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF----TEEELRN-ISRDAS-IPKPKLA 84 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~----~~~~~~~-~~~~~~-~~~~d~v 84 (202)
+.+++|+|++|++|..+++.+...|++|+.++++.+. .+.. .+...+. +++++.. +..... .+.+|++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~----~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~l 77 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPAR----AAPI--PGVELLELDVTDDASVQAAVDEVIARAGRIDVL 77 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhh----cccc--CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEE
Confidence 5689999999999999999888899999988876542 2111 1222222 2334444 333211 2468999
Q ss_pred EecCCC
Q psy2961 85 LNCVGG 90 (202)
Q Consensus 85 id~~g~ 90 (202)
|.+.|.
T Consensus 78 i~~ag~ 83 (270)
T PRK06179 78 VNNAGV 83 (270)
T ss_pred EECCCC
Confidence 999984
No 333
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.42 E-value=0.00023 Score=57.75 Aligned_cols=43 Identities=9% Similarity=0.157 Sum_probs=37.2
Q ss_pred cccCCCCCCEEE----EeCCCcHHHHHHHHHHHHCCCcEEEEecCcc
Q psy2961 4 DYNSLSPGDVVI----QNGANSACGQNVIQIARHWGLKTINIVRNRD 46 (202)
Q Consensus 4 ~~~~~~~g~~Vl----I~g~~~~vG~~~i~la~~~g~~vi~~~~~~~ 46 (202)
...++++|+++| |+|+.|++|.+++|+++..|++|+.+.+...
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~ 73 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGL 73 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccc
Confidence 456788999998 8998899999999999999999998776553
No 334
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.42 E-value=0.0011 Score=52.58 Aligned_cols=96 Identities=17% Similarity=0.204 Sum_probs=62.3
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce-E-eChhHHHhHHHhhCCCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-V-FTEEELRNISRDASIPKP 81 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-v-~~~~~~~~~~~~~~~~~~ 81 (202)
+..++++|++||-.|+| .|..+..+++..|++|+++..+++. .+.+++..... + +...+. ... ...+
T Consensus 161 ~~l~l~~g~rVLDIGcG--~G~~a~~la~~~g~~V~giDlS~~~----l~~A~~~~~~l~v~~~~~D~---~~l--~~~f 229 (383)
T PRK11705 161 RKLQLKPGMRVLDIGCG--WGGLARYAAEHYGVSVVGVTISAEQ----QKLAQERCAGLPVEIRLQDY---RDL--NGQF 229 (383)
T ss_pred HHhCCCCCCEEEEeCCC--ccHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHhccCeEEEEECch---hhc--CCCC
Confidence 45567899999999986 6888899999889999998877763 55554432111 1 111121 111 2468
Q ss_pred eEEEec-----CCCc----hHHHHHHhcccCcEEEEEe
Q psy2961 82 KLALNC-----VGGN----SATNLLRTLVSKGVMVTYG 110 (202)
Q Consensus 82 d~vid~-----~g~~----~~~~~~~~l~~~G~~v~~g 110 (202)
|.|+.. +|.. .+..+.+.|+|+|.++...
T Consensus 230 D~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 230 DRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred CEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 988643 3332 2234678999999998754
No 335
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=97.41 E-value=0.0016 Score=51.06 Aligned_cols=80 Identities=14% Similarity=0.161 Sum_probs=49.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcC--CceEe-ChhHHHhHHHhhCCCCCeEEEe
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLG--ADYVF-TEEELRNISRDASIPKPKLALN 86 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg--~~~v~-~~~~~~~~~~~~~~~~~d~vid 86 (202)
.|.+|||+|++|.+|..+++.+...|.+|+++.+++.........+. .+ ...+. |-.+...+.+.....++|+||.
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih 81 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH 81 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence 36899999999999999999999999999988766553111111111 11 11121 2122222333333346899999
Q ss_pred cCCC
Q psy2961 87 CVGG 90 (202)
Q Consensus 87 ~~g~ 90 (202)
+++.
T Consensus 82 ~A~~ 85 (349)
T TIGR02622 82 LAAQ 85 (349)
T ss_pred CCcc
Confidence 9873
No 336
>PRK06398 aldose dehydrogenase; Validated
Probab=97.41 E-value=0.00038 Score=52.13 Aligned_cols=76 Identities=20% Similarity=0.226 Sum_probs=48.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHh-HHHhhC-CCCCeEEEec
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDAS-IPKPKLALNC 87 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~-~~~~d~vid~ 87 (202)
.|.++||+|+++++|.++++.+...|++|+.+.++.+. ...+..+.++ +-++.+... +.+... -+++|++|.+
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~----~~~~~~~~~D-~~~~~~i~~~~~~~~~~~~~id~li~~ 79 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS----YNDVDYFKVD-VSNKEQVIKGIDYVISKYGRIDILVNN 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc----cCceEEEEcc-CCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 46899999999999999999999999999988766542 1111000001 112334433 333221 1469999998
Q ss_pred CCC
Q psy2961 88 VGG 90 (202)
Q Consensus 88 ~g~ 90 (202)
.|.
T Consensus 80 Ag~ 82 (258)
T PRK06398 80 AGI 82 (258)
T ss_pred CCC
Confidence 873
No 337
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.40 E-value=0.0011 Score=54.36 Aligned_cols=74 Identities=22% Similarity=0.254 Sum_probs=52.2
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHh-HHHhhCCCCCeEEE
Q psy2961 7 SLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKLAL 85 (202)
Q Consensus 7 ~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~d~vi 85 (202)
++.+|++|+|+|.| ..|++++++++..|++|++....++ +.+.++++|...+.... ..+ + ..+|+||
T Consensus 8 ~~~~~~~v~V~G~G-~sG~aa~~~L~~~G~~v~~~D~~~~----~~~~l~~~g~~~~~~~~-~~~~l------~~~D~VV 75 (488)
T PRK03369 8 PLLPGAPVLVAGAG-VTGRAVLAALTRFGARPTVCDDDPD----ALRPHAERGVATVSTSD-AVQQI------ADYALVV 75 (488)
T ss_pred cccCCCeEEEEcCC-HHHHHHHHHHHHCCCEEEEEcCCHH----HHHHHHhCCCEEEcCcc-hHhHh------hcCCEEE
Confidence 35688999999999 8999999999999999888553332 34456777775433211 112 2 3569999
Q ss_pred ecCCCch
Q psy2961 86 NCVGGNS 92 (202)
Q Consensus 86 d~~g~~~ 92 (202)
.+.|-+.
T Consensus 76 ~SpGi~~ 82 (488)
T PRK03369 76 TSPGFRP 82 (488)
T ss_pred ECCCCCC
Confidence 9888653
No 338
>PRK06123 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.002 Score=47.71 Aligned_cols=80 Identities=15% Similarity=0.184 Sum_probs=48.4
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCc-ccHHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CCCC
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR-DDIDKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~-~~~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~~~ 81 (202)
+.++||+|+++++|..+++.+...|++++.+.+++ +...+..+.++..+..... | ...+.. +.+... .+.+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999988888999877665433 2211122333444433222 2 223333 332211 1468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 82 d~li~~ag~ 90 (248)
T PRK06123 82 DALVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998874
No 339
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.00053 Score=50.37 Aligned_cols=72 Identities=19% Similarity=0.225 Sum_probs=49.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE-eC---hhHHHh-HHHhhCCCCCeEE
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FT---EEELRN-ISRDASIPKPKLA 84 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~~---~~~~~~-~~~~~~~~~~d~v 84 (202)
.+.+++|.|++|++|..+++.+...|++|+.+.++.+. . .....+ .| ..+... +.+.....++|++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~v 72 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----D----FPGELFACDLADIEQTAATLAQINEIHPVDAI 72 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----c----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEE
Confidence 35789999999999999999999999999988877642 1 111111 12 333444 4444333468999
Q ss_pred EecCCC
Q psy2961 85 LNCVGG 90 (202)
Q Consensus 85 id~~g~ 90 (202)
|.+.|.
T Consensus 73 i~~ag~ 78 (234)
T PRK07577 73 VNNVGI 78 (234)
T ss_pred EECCCC
Confidence 998874
No 340
>PRK08264 short chain dehydrogenase; Validated
Probab=97.39 E-value=0.0016 Score=48.02 Aligned_cols=72 Identities=21% Similarity=0.277 Sum_probs=47.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHhcCC--ceEe-C---hhHHHhHHHhhCCCCCe
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGA--DYVF-T---EEELRNISRDASIPKPK 82 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~--~~v~-~---~~~~~~~~~~~~~~~~d 82 (202)
.+.+++|+|++|++|..+++.+...|+ +|+.+.++.+. .+. .+. ..+. | .+++..+.+.. ..+|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~----~~~---~~~~~~~~~~D~~~~~~~~~~~~~~--~~id 75 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPES----VTD---LGPRVVPLQLDVTDPASVAAAAEAA--SDVT 75 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhh----hhh---cCCceEEEEecCCCHHHHHHHHHhc--CCCC
Confidence 467899999999999999999999999 88887776542 221 222 2111 2 23333322221 4689
Q ss_pred EEEecCCC
Q psy2961 83 LALNCVGG 90 (202)
Q Consensus 83 ~vid~~g~ 90 (202)
++|.+.|.
T Consensus 76 ~vi~~ag~ 83 (238)
T PRK08264 76 ILVNNAGI 83 (238)
T ss_pred EEEECCCc
Confidence 99999876
No 341
>PRK09134 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.0025 Score=47.59 Aligned_cols=81 Identities=17% Similarity=0.252 Sum_probs=49.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCccc-HHHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhhC-CCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-IDKLKSYLKSLGADY-VF--T---EEELRN-ISRDAS-IPK 80 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~-~~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~~-~~~ 80 (202)
.+.++||+|+++++|..+++.+...|++++.+.+++.. .....+.++..+... .+ | ..+... +.+... .++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 56799999999999999999888999998887765432 111112222334321 11 3 233333 332211 247
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
+|++|.+.|.
T Consensus 88 iD~vi~~ag~ 97 (258)
T PRK09134 88 ITLLVNNASL 97 (258)
T ss_pred CCEEEECCcC
Confidence 9999999873
No 342
>KOG1208|consensus
Probab=97.37 E-value=0.0015 Score=50.30 Aligned_cols=81 Identities=16% Similarity=0.181 Sum_probs=54.3
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHh-cCCceEe----C---hhHHHh-HHHh-hCC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADYVF----T---EEELRN-ISRD-ASI 78 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~-lg~~~v~----~---~~~~~~-~~~~-~~~ 78 (202)
-.|.+++|+|+++|+|..+++-+...|++|+..+++.+...+..+.+++ .....+. | .+.... ..+. ...
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 3567999999999999999999999999999999998654444444443 2233322 2 122222 1111 123
Q ss_pred CCCeEEEecCC
Q psy2961 79 PKPKLALNCVG 89 (202)
Q Consensus 79 ~~~d~vid~~g 89 (202)
.+.|+.|+.+|
T Consensus 113 ~~ldvLInNAG 123 (314)
T KOG1208|consen 113 GPLDVLINNAG 123 (314)
T ss_pred CCccEEEeCcc
Confidence 67899999887
No 343
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.37 E-value=0.0062 Score=43.97 Aligned_cols=93 Identities=11% Similarity=0.140 Sum_probs=55.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 89 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~g 89 (202)
.|.+|+|.|+| .+|...++.+...|++++++..... ++..+.+.. +.-.. ....+.. .. -.++|+||-+++
T Consensus 9 ~~k~vLVIGgG-~va~~ka~~Ll~~ga~V~VIs~~~~--~~l~~l~~~-~~i~~-~~~~~~~--~~--l~~adlViaaT~ 79 (202)
T PRK06718 9 SNKRVVIVGGG-KVAGRRAITLLKYGAHIVVISPELT--ENLVKLVEE-GKIRW-KQKEFEP--SD--IVDAFLVIAATN 79 (202)
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEcCCCC--HHHHHHHhC-CCEEE-EecCCCh--hh--cCCceEEEEcCC
Confidence 56899999998 8999999888889998877754322 111222222 21111 1111111 00 157899999999
Q ss_pred CchHHHHHHhcccCcEEEEEec
Q psy2961 90 GNSATNLLRTLVSKGVMVTYGG 111 (202)
Q Consensus 90 ~~~~~~~~~~l~~~G~~v~~g~ 111 (202)
.+.....+...+..+.++.+..
T Consensus 80 d~elN~~i~~~a~~~~lvn~~d 101 (202)
T PRK06718 80 DPRVNEQVKEDLPENALFNVIT 101 (202)
T ss_pred CHHHHHHHHHHHHhCCcEEECC
Confidence 9988764433334456666653
No 344
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=97.36 E-value=0.0022 Score=47.53 Aligned_cols=78 Identities=15% Similarity=0.180 Sum_probs=47.9
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc-cHHHHHHHHHhcCCceEe---C---hhHHHh-HHHhhC-CCCCe
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD-DIDKLKSYLKSLGADYVF---T---EEELRN-ISRDAS-IPKPK 82 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~-~~~~~~~~~~~lg~~~v~---~---~~~~~~-~~~~~~-~~~~d 82 (202)
.+|||.|+++++|..+++.+...|++++.+.+++. ...+..+.++..+..... | ..+... +.+... .+++|
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD 82 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence 58999999999999999999999999877654432 211122333334432211 2 233333 333211 24689
Q ss_pred EEEecCC
Q psy2961 83 LALNCVG 89 (202)
Q Consensus 83 ~vid~~g 89 (202)
++|.++|
T Consensus 83 ~li~~ag 89 (248)
T PRK06947 83 ALVNNAG 89 (248)
T ss_pred EEEECCc
Confidence 9999887
No 345
>PRK09135 pteridine reductase; Provisional
Probab=97.35 E-value=0.0016 Score=48.15 Aligned_cols=37 Identities=11% Similarity=0.167 Sum_probs=32.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 46 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~ 46 (202)
.+.+|||+|++|++|..+++.+...|++|+.+.++.+
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~ 41 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSA 41 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 4578999999999999999888889999999887643
No 346
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.35 E-value=0.0027 Score=47.24 Aligned_cols=79 Identities=15% Similarity=0.215 Sum_probs=49.1
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCccc-HHHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhhC-CCCCe
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-IDKLKSYLKSLGADY-VF--T---EEELRN-ISRDAS-IPKPK 82 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~-~~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~~-~~~~d 82 (202)
.+++|.|++|++|..+++.+...|++++.+.++... ..+..+.++..+... ++ | +.+... +.+... .+.+|
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID 82 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999999999999888866432 111122333333321 11 2 333333 332211 14689
Q ss_pred EEEecCCC
Q psy2961 83 LALNCVGG 90 (202)
Q Consensus 83 ~vid~~g~ 90 (202)
++|.+.|.
T Consensus 83 ~vi~~ag~ 90 (256)
T PRK12745 83 CLVNNAGV 90 (256)
T ss_pred EEEECCcc
Confidence 99999874
No 347
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.35 E-value=0.00068 Score=50.11 Aligned_cols=80 Identities=24% Similarity=0.339 Sum_probs=48.8
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEE-ecCcccHHHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhhC-CCCC
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINI-VRNRDDIDKLKSYLKSLGADY-VF--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~-~~~~~~~~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
+.++||.|++|++|..++..+...|++++.+ .++.+...+..+.+...+... ++ | .+++.. +.+... .+++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 5689999999999999998888889998888 655443222223333323221 11 2 233333 222211 1469
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (247)
T PRK05565 85 DILVNNAGI 93 (247)
T ss_pred CEEEECCCc
Confidence 999998874
No 348
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.35 E-value=0.0024 Score=51.14 Aligned_cols=78 Identities=14% Similarity=0.094 Sum_probs=51.6
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCV 88 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~ 88 (202)
-.+.+|+|.|+| ++|.+++.-+...|+..+.++++... ...+.+.+++...++..+++.+ .. ..+|+||.|+
T Consensus 179 l~~kkvlviGaG-~~a~~va~~L~~~g~~~I~V~nRt~~--ra~~La~~~~~~~~~~~~~l~~---~l--~~aDiVI~aT 250 (414)
T PRK13940 179 ISSKNVLIIGAG-QTGELLFRHVTALAPKQIMLANRTIE--KAQKITSAFRNASAHYLSELPQ---LI--KKADIIIAAV 250 (414)
T ss_pred ccCCEEEEEcCc-HHHHHHHHHHHHcCCCEEEEECCCHH--HHHHHHHHhcCCeEecHHHHHH---Hh--ccCCEEEECc
Confidence 357899999998 89999998888899866666655432 1234445565223344444333 11 4689999999
Q ss_pred CCchHH
Q psy2961 89 GGNSAT 94 (202)
Q Consensus 89 g~~~~~ 94 (202)
+.+...
T Consensus 251 ~a~~~v 256 (414)
T PRK13940 251 NVLEYI 256 (414)
T ss_pred CCCCee
Confidence 988753
No 349
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=97.33 E-value=0.003 Score=46.71 Aligned_cols=79 Identities=11% Similarity=0.139 Sum_probs=48.9
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCcEEEEe-cCcccHHHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhh-CCCCCe
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGLKTINIV-RNRDDIDKLKSYLKSLGADY-VF--T---EEELRN-ISRDA-SIPKPK 82 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~-~~~~~~~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~-~~~~~d 82 (202)
.+++|+|++|++|..+++.+...|++|+.+. ++.+...+....++..+... ++ | .++... +.+.. ...++|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 4799999999999999998888999987754 33332222223334444321 11 2 233333 33322 235789
Q ss_pred EEEecCCC
Q psy2961 83 LALNCVGG 90 (202)
Q Consensus 83 ~vid~~g~ 90 (202)
++|.++|.
T Consensus 82 ~vi~~ag~ 89 (247)
T PRK09730 82 ALVNNAGI 89 (247)
T ss_pred EEEECCCC
Confidence 99999884
No 350
>KOG1014|consensus
Probab=97.33 E-value=0.0023 Score=48.45 Aligned_cols=82 Identities=13% Similarity=0.197 Sum_probs=56.3
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHH-HHHHhcCCc---eEeCh----hHHHhHHHhhCCCC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLK-SYLKSLGAD---YVFTE----EELRNISRDASIPK 80 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~-~~~~~lg~~---~v~~~----~~~~~~~~~~~~~~ 80 (202)
+.|++.+|.|++.++|.+.+.-+...|.+|+.+.|+.++++.-. +..+..++. .++|. .+++.+++.+.+-.
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence 45789999999999999866555559999999999988544322 233344532 12231 12333777777778
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
+-+.++++|-
T Consensus 127 VgILVNNvG~ 136 (312)
T KOG1014|consen 127 VGILVNNVGM 136 (312)
T ss_pred eEEEEecccc
Confidence 8899999984
No 351
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.32 E-value=0.0022 Score=47.95 Aligned_cols=79 Identities=19% Similarity=0.255 Sum_probs=49.2
Q ss_pred CCCEEEEeCC--CcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcCCc--eE-eC---hhHHHh-HHHhhC-C
Q psy2961 10 PGDVVIQNGA--NSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGAD--YV-FT---EEELRN-ISRDAS-I 78 (202)
Q Consensus 10 ~g~~VlI~g~--~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~--~v-~~---~~~~~~-~~~~~~-~ 78 (202)
.+.+++|+|+ ++++|.++++.+...|++|+.+.++... +..+.+ .+++.. .+ .| +++... +.+... .
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRAL--RLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHV 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccch--hHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4689999999 7899999999888899998887754311 122222 334321 11 12 333333 333221 2
Q ss_pred CCCeEEEecCCC
Q psy2961 79 PKPKLALNCVGG 90 (202)
Q Consensus 79 ~~~d~vid~~g~ 90 (202)
+++|++|.++|.
T Consensus 84 g~iD~li~nAG~ 95 (256)
T PRK07889 84 DGLDGVVHSIGF 95 (256)
T ss_pred CCCcEEEEcccc
Confidence 579999998863
No 352
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=97.31 E-value=0.0062 Score=47.96 Aligned_cols=96 Identities=13% Similarity=0.311 Sum_probs=63.5
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCcEEEEecCcccHHHHHHHHHhcCCceEe--ChhHHHhHH--------------
Q psy2961 12 DVVIQNGANSACGQNVIQIARHW--GLKTINIVRNRDDIDKLKSYLKSLGADYVF--TEEELRNIS-------------- 73 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~--g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~--~~~~~~~~~-------------- 73 (202)
.+|.|+|++|++|..++...+.. .+++++++...+ .+...++++++++..++ +......++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n-~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKN-VELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCC-HHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 57999999999999999988765 578888874433 23456777888888766 322111122
Q ss_pred ----HhhCCCCCeEEEecCCCchH-HHHHHhcccCcEEEE
Q psy2961 74 ----RDASIPKPKLALNCVGGNSA-TNLLRTLVSKGVMVT 108 (202)
Q Consensus 74 ----~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~ 108 (202)
+......+|+|+.+++|... ...+.+++.|-++.+
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL 120 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL 120 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence 22223468999998877643 346677766655544
No 353
>KOG1199|consensus
Probab=97.30 E-value=0.0021 Score=44.54 Aligned_cols=80 Identities=20% Similarity=0.309 Sum_probs=59.6
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeCh------hHHHh-HHHhhC-CCC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTE------EELRN-ISRDAS-IPK 80 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~------~~~~~-~~~~~~-~~~ 80 (202)
-+|-.-||.|+.+++|.+++..+...|+.++...-+.++ -.+.++++|...++.+ +|... +...-. -+.
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~sk---g~~vakelg~~~vf~padvtsekdv~aala~ak~kfgr 83 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSK---GADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGR 83 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCccc---chHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccc
Confidence 456677999999999999999999999998887766654 4688899998877743 34433 332221 245
Q ss_pred CeEEEecCCCc
Q psy2961 81 PKLALNCVGGN 91 (202)
Q Consensus 81 ~d~vid~~g~~ 91 (202)
.|+.++|.|-.
T Consensus 84 ld~~vncagia 94 (260)
T KOG1199|consen 84 LDALVNCAGIA 94 (260)
T ss_pred eeeeeecccee
Confidence 89999999954
No 354
>PRK12827 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.0028 Score=46.88 Aligned_cols=81 Identities=11% Similarity=0.091 Sum_probs=48.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHH----HHHhcCCceE-e--C---hhHHHh-HHHhhC-
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKS----YLKSLGADYV-F--T---EEELRN-ISRDAS- 77 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~----~~~~lg~~~v-~--~---~~~~~~-~~~~~~- 77 (202)
.+.+++|.|++|++|..+++.+...|++++.+.+......+..+ .+...+.... + | ..+... +.+...
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 35789999999999999999888899998886543221111222 2233333321 1 2 233333 322211
Q ss_pred CCCCeEEEecCCC
Q psy2961 78 IPKPKLALNCVGG 90 (202)
Q Consensus 78 ~~~~d~vid~~g~ 90 (202)
..++|.+|.++|.
T Consensus 85 ~~~~d~vi~~ag~ 97 (249)
T PRK12827 85 FGRLDILVNNAGI 97 (249)
T ss_pred hCCCCEEEECCCC
Confidence 2468999999874
No 355
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.0025 Score=48.16 Aligned_cols=76 Identities=14% Similarity=0.202 Sum_probs=49.1
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHH-hcCCce-Ee--C---hhHHHh-HHHhhC-CCCC
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK-SLGADY-VF--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~-~lg~~~-v~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
+.+|||+|++|++|..+++.+...|++|+.+.++++. .+.+. .++... ++ | .++... +..... -.++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTAT----LADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999998888889999888877653 33332 222221 11 2 233333 322211 1478
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 79 d~vi~~ag~ 87 (275)
T PRK08263 79 DIVVNNAGY 87 (275)
T ss_pred CEEEECCCC
Confidence 999999874
No 356
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0022 Score=47.71 Aligned_cols=75 Identities=15% Similarity=0.213 Sum_probs=48.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE-eC---hhHHHh-HHHhhC-CCCCeE
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FT---EEELRN-ISRDAS-IPKPKL 83 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~~---~~~~~~-~~~~~~-~~~~d~ 83 (202)
.+.+++|+|+++++|..+++.+...|++|+.+.++.+ + .........+ .| +++... +..... .+.+|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~----~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAP----E--TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChh----h--hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4789999999999999999999889999988887653 1 1111111111 12 233333 332211 246899
Q ss_pred EEecCCC
Q psy2961 84 ALNCVGG 90 (202)
Q Consensus 84 vid~~g~ 90 (202)
+|.+.|.
T Consensus 79 vi~~ag~ 85 (252)
T PRK07856 79 LVNNAGG 85 (252)
T ss_pred EEECCCC
Confidence 9998873
No 357
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0026 Score=48.02 Aligned_cols=75 Identities=20% Similarity=0.284 Sum_probs=49.1
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHh-cCCce-E--eC---hhHHHh-HHHhh-CCCCCe
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS-LGADY-V--FT---EEELRN-ISRDA-SIPKPK 82 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~-lg~~~-v--~~---~~~~~~-~~~~~-~~~~~d 82 (202)
.++||+|++|++|..+++.+...|++|+.+.++++. .+.+++ .+... + .| .+.... +.+.. ...++|
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDA----LDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRID 78 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 579999999999999998888899999998887652 333332 22221 1 12 233333 33321 125689
Q ss_pred EEEecCCC
Q psy2961 83 LALNCVGG 90 (202)
Q Consensus 83 ~vid~~g~ 90 (202)
++|.++|.
T Consensus 79 ~vi~~ag~ 86 (276)
T PRK06482 79 VVVSNAGY 86 (276)
T ss_pred EEEECCCC
Confidence 99999874
No 358
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=97.28 E-value=0.0015 Score=49.45 Aligned_cols=101 Identities=22% Similarity=0.237 Sum_probs=68.1
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeC-hhHHHhHHHhhCCCCCeEEE
Q psy2961 7 SLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFT-EEELRNISRDASIPKPKLAL 85 (202)
Q Consensus 7 ~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~-~~~~~~~~~~~~~~~~d~vi 85 (202)
.+.+++ |.|+|+| .+|.-++++|.-+|++|.....+.+ |+.++..+-...+-. +.+...+.+.. .+.|++|
T Consensus 165 GV~~~k-v~iiGGG-vvgtnaAkiA~glgA~Vtild~n~~----rl~~ldd~f~~rv~~~~st~~~iee~v--~~aDlvI 236 (371)
T COG0686 165 GVLPAK-VVVLGGG-VVGTNAAKIAIGLGADVTILDLNID----RLRQLDDLFGGRVHTLYSTPSNIEEAV--KKADLVI 236 (371)
T ss_pred CCCCcc-EEEECCc-cccchHHHHHhccCCeeEEEecCHH----HHhhhhHhhCceeEEEEcCHHHHHHHh--hhccEEE
Confidence 344544 5566887 8999999999999999999988876 677776654333321 22222233332 4678998
Q ss_pred ecC--CCch-----HHHHHHhcccCcEEEEEeccCCC
Q psy2961 86 NCV--GGNS-----ATNLLRTLVSKGVMVTYGGMSRE 115 (202)
Q Consensus 86 d~~--g~~~-----~~~~~~~l~~~G~~v~~g~~~~~ 115 (202)
.++ .+.. +.+.++.|+||+.++.+....+.
T Consensus 237 gaVLIpgakaPkLvt~e~vk~MkpGsVivDVAiDqGG 273 (371)
T COG0686 237 GAVLIPGAKAPKLVTREMVKQMKPGSVIVDVAIDQGG 273 (371)
T ss_pred EEEEecCCCCceehhHHHHHhcCCCcEEEEEEEcCCC
Confidence 866 2222 33478899999999999865553
No 359
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.27 E-value=0.0026 Score=50.21 Aligned_cols=93 Identities=12% Similarity=0.048 Sum_probs=62.2
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-CcEEEEecCcccHHHHHHHHHhcC---Cc-eEeChhHHHhHHHhhCCCCCeEEEe
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWG-LKTINIVRNRDDIDKLKSYLKSLG---AD-YVFTEEELRNISRDASIPKPKLALN 86 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g-~~vi~~~~~~~~~~~~~~~~~~lg---~~-~v~~~~~~~~~~~~~~~~~~d~vid 86 (202)
.+|||+|+| .+|+.+++.+...| .+|+.++++.+ +.+.+.+.. .. ..+|-.+..++.+.. .++|+||+
T Consensus 2 ~~ilviGaG-~Vg~~va~~la~~~d~~V~iAdRs~~----~~~~i~~~~~~~v~~~~vD~~d~~al~~li--~~~d~VIn 74 (389)
T COG1748 2 MKILVIGAG-GVGSVVAHKLAQNGDGEVTIADRSKE----KCARIAELIGGKVEALQVDAADVDALVALI--KDFDLVIN 74 (389)
T ss_pred CcEEEECCc-hhHHHHHHHHHhCCCceEEEEeCCHH----HHHHHHhhccccceeEEecccChHHHHHHH--hcCCEEEE
Confidence 578999996 99999999988888 78888888876 355554442 22 223333332233333 34599999
Q ss_pred cCCCchHHHHH-HhcccCcEEEEEec
Q psy2961 87 CVGGNSATNLL-RTLVSKGVMVTYGG 111 (202)
Q Consensus 87 ~~g~~~~~~~~-~~l~~~G~~v~~g~ 111 (202)
|.+......++ .|++.+=.++.+..
T Consensus 75 ~~p~~~~~~i~ka~i~~gv~yvDts~ 100 (389)
T COG1748 75 AAPPFVDLTILKACIKTGVDYVDTSY 100 (389)
T ss_pred eCCchhhHHHHHHHHHhCCCEEEccc
Confidence 99988776666 46666666776653
No 360
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.27 E-value=0.0031 Score=46.54 Aligned_cols=78 Identities=15% Similarity=0.268 Sum_probs=48.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF--T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~~-~~~~ 81 (202)
++.+++|.|++|++|..+++.+...|+.|+...++.+. ..+....++... ++ | .+.... +.+... -.++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEK---LEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGV 81 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHH---HHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46799999999999999999988899977766655442 122223333321 11 2 233333 222211 1469
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 82 d~vi~~ag~ 90 (245)
T PRK12936 82 DILVNNAGI 90 (245)
T ss_pred CEEEECCCC
Confidence 999999874
No 361
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.26 E-value=0.0052 Score=43.27 Aligned_cols=100 Identities=22% Similarity=0.283 Sum_probs=63.4
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHC-CCcEEEEecCcccHHHHHHHHHhcCCceEeC-hhHHHh-HHHhhCCCCCe
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARHW-GLKTINIVRNRDDIDKLKSYLKSLGADYVFT-EEELRN-ISRDASIPKPK 82 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~~-g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~-~~~~~~-~~~~~~~~~~d 82 (202)
.++++|+.++=.|+| .|..++++++.. ..++|++-+.++..+--..-++++|.+.+.. ..+-.+ +... ..+|
T Consensus 30 L~~~~g~~l~DIGaG--tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~---~~~d 104 (187)
T COG2242 30 LRPRPGDRLWDIGAG--TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDL---PSPD 104 (187)
T ss_pred hCCCCCCEEEEeCCC--ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCC---CCCC
Confidence 467899988888886 588899999544 3578888877763222223335678764432 111111 2221 3689
Q ss_pred EEEecCCCch---HHHHHHhcccCcEEEEEe
Q psy2961 83 LALNCVGGNS---ATNLLRTLVSKGVMVTYG 110 (202)
Q Consensus 83 ~vid~~g~~~---~~~~~~~l~~~G~~v~~g 110 (202)
.+|--.|+.. +..++..|+++|++|.-.
T Consensus 105 aiFIGGg~~i~~ile~~~~~l~~ggrlV~na 135 (187)
T COG2242 105 AIFIGGGGNIEEILEAAWERLKPGGRLVANA 135 (187)
T ss_pred EEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence 9986655332 234789999999999744
No 362
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.26 E-value=0.011 Score=40.86 Aligned_cols=89 Identities=11% Similarity=0.049 Sum_probs=55.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 89 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~g 89 (202)
.|.+|+|.|+| .+|..-++.+...|++|+++. ++ ..+.+++++.-... ...+.+ .+-.++|+||-+++
T Consensus 12 ~~~~vlVvGGG-~va~rka~~Ll~~ga~V~VIs--p~----~~~~l~~l~~i~~~-~~~~~~----~dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGGG-KIAYRKASGLKDTGAFVTVVS--PE----ICKEMKELPYITWK-QKTFSN----DDIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECCC-HHHHHHHHHHHhCCCEEEEEc--Cc----cCHHHHhccCcEEE-ecccCh----hcCCCceEEEECCC
Confidence 57899999999 899999988888999988773 33 12344445422221 122111 01157899999999
Q ss_pred CchHHHHHHhcccCcEEEEEe
Q psy2961 90 GNSATNLLRTLVSKGVMVTYG 110 (202)
Q Consensus 90 ~~~~~~~~~~l~~~G~~v~~g 110 (202)
.+.....+...+..+.++.+.
T Consensus 80 d~e~N~~i~~~a~~~~~vn~~ 100 (157)
T PRK06719 80 QHAVNMMVKQAAHDFQWVNVV 100 (157)
T ss_pred CHHHHHHHHHHHHHCCcEEEC
Confidence 888776444333333355543
No 363
>KOG1209|consensus
Probab=97.26 E-value=0.0037 Score=44.95 Aligned_cols=100 Identities=19% Similarity=0.265 Sum_probs=66.2
Q ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHH-hcCCc-eEeC---hhHHH---h-HHHhhCCC
Q psy2961 10 PGDVVIQNGA-NSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK-SLGAD-YVFT---EEELR---N-ISRDASIP 79 (202)
Q Consensus 10 ~g~~VlI~g~-~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~-~lg~~-~v~~---~~~~~---~-~~~~~~~~ 79 (202)
....|||.|+ .||+|.+++.-....|+.|++++++-+. ...+. +.|.. .-+| +++.. . +++. ..+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~----M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~-~~G 80 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEP----MAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRAN-PDG 80 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccch----HhhHHHhhCCeeEEeccCChHHHHHHHHHHhhC-CCC
Confidence 4467888874 5689999999999999999999998873 55553 56642 1222 33332 2 4443 336
Q ss_pred CCeEEEecCCCchH-------------------------HHHH--HhcccCcEEEEEeccCC
Q psy2961 80 KPKLALNCVGGNSA-------------------------TNLL--RTLVSKGVMVTYGGMSR 114 (202)
Q Consensus 80 ~~d~vid~~g~~~~-------------------------~~~~--~~l~~~G~~v~~g~~~~ 114 (202)
..|+.++.+|.+.. .+.+ .+.+..|++|.+|...+
T Consensus 81 kld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~ 142 (289)
T KOG1209|consen 81 KLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAG 142 (289)
T ss_pred ceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeE
Confidence 79999998885421 1111 13467899999987654
No 364
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.25 E-value=0.004 Score=45.90 Aligned_cols=80 Identities=16% Similarity=0.247 Sum_probs=49.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHH-HHHHhcCCc--eEe-C---hhHHHh-HHHhhC-CCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLK-SYLKSLGAD--YVF-T---EEELRN-ISRDAS-IPK 80 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~-~~~~~lg~~--~v~-~---~~~~~~-~~~~~~-~~~ 80 (202)
+..+|||+|++|++|..+++.+...|++++.++++.+...+.. ..+...+.. .+. | .+++.. +.+... ..+
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 3468999999999999999999999999888777665321111 122223322 111 2 233333 322211 257
Q ss_pred CeEEEecCC
Q psy2961 81 PKLALNCVG 89 (202)
Q Consensus 81 ~d~vid~~g 89 (202)
+|.+|.++|
T Consensus 85 id~vi~~ag 93 (249)
T PRK12825 85 IDILVNNAG 93 (249)
T ss_pred CCEEEECCc
Confidence 899999887
No 365
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=97.25 E-value=0.011 Score=44.80 Aligned_cols=150 Identities=15% Similarity=0.164 Sum_probs=93.6
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeC--------h-----hHHHh-
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFT--------E-----EELRN- 71 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~--------~-----~~~~~- 71 (202)
+.-.++..+++.|.| ..|++++-.++..|+-|...--.+. +.++.+.+|++.+.- | +++..
T Consensus 159 agtv~pA~vlv~G~G-vagl~aiata~~lG~iVt~rdlrm~----~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~ 233 (356)
T COG3288 159 AGTVSPAKVLVIGAG-VAGLAAIATAVRLGAIVTARDLRMF----KKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAK 233 (356)
T ss_pred cccccchhhhhhhHH-HHHHHHHHHHhhcceEEehhhhhhH----HhhhhhhcccccccccccccCCCccccCCHHHHHH
Confidence 344566788999998 9999999999999996555443433 456667777654431 1 12221
Q ss_pred ----HHHhhCCCCCeEEEecC---CCc--h--HHHHHHhcccCcEEEEEeccCCCCcCC--CcccccccCeeEEEEech-
Q psy2961 72 ----ISRDASIPKPKLALNCV---GGN--S--ATNLLRTLVSKGVMVTYGGMSREPVQI--PTSAFIFKDITLRGHWMT- 137 (202)
Q Consensus 72 ----~~~~~~~~~~d~vid~~---g~~--~--~~~~~~~l~~~G~~v~~g~~~~~~~~~--~~~~~~~~~~~~~g~~~~- 137 (202)
+.+.. .++|+||-+. |.+ . .......|+||..+|.+..-.+.+... +......++.++.|...-
T Consensus 234 q~~~~a~~~--~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nlp 311 (356)
T COG3288 234 QAELVAEQA--KEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNLP 311 (356)
T ss_pred HHHHHHHHh--cCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCcc
Confidence 22222 6799999877 222 1 223678999999999997666655433 223345677888886532
Q ss_pred hHhhhcccHHHHHHHHHHHHHHHHcC
Q psy2961 138 RWQKENKESAERKSMMNELTEMMRTG 163 (202)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~g 163 (202)
.....+. ...+...+-.+++++.+.
T Consensus 312 ~r~a~~a-S~LYa~Nl~~~l~ll~~~ 336 (356)
T COG3288 312 GRLAAQA-SQLYATNLVNLLKLLCKK 336 (356)
T ss_pred hhhhhhH-HHHHHHHHHHHHHHHhcc
Confidence 2222222 245666666777766543
No 366
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.24 E-value=0.0039 Score=46.26 Aligned_cols=76 Identities=13% Similarity=0.166 Sum_probs=47.6
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcCCce-Ee--C---hhHHHh-HHHhh--CCCC
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADY-VF--T---EEELRN-ISRDA--SIPK 80 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~-v~--~---~~~~~~-~~~~~--~~~~ 80 (202)
+.+++|+|++|++|..++..+...|++|+.+.++... +.+.+ .+++... ++ | ++++.. +.+.. .+.+
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSED---AAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKP 81 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHH---HHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999988999998877654432 22222 3343221 11 2 333333 33221 1234
Q ss_pred CeEEEecCC
Q psy2961 81 PKLALNCVG 89 (202)
Q Consensus 81 ~d~vid~~g 89 (202)
+|++|.+.|
T Consensus 82 id~li~~ag 90 (253)
T PRK08642 82 ITTVVNNAL 90 (253)
T ss_pred CeEEEECCC
Confidence 999999875
No 367
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=97.22 E-value=0.0039 Score=45.97 Aligned_cols=103 Identities=17% Similarity=0.203 Sum_probs=66.3
Q ss_pred ccccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC--cEEEEecCcccHHHHHHHHHhcCCceEeC--hhHHHhHHHhhCC
Q psy2961 3 KDYNSLSPGDVVIQNGANSACGQNVIQIARHWGL--KTINIVRNRDDIDKLKSYLKSLGADYVFT--EEELRNISRDASI 78 (202)
Q Consensus 3 ~~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~--~vi~~~~~~~~~~~~~~~~~~lg~~~v~~--~~~~~~~~~~~~~ 78 (202)
..+.++.||++|+=.|.| .|.+++.||+..|. +|+..-..++..+-.++-++++|....+. ..| +.+...+
T Consensus 87 ~~~~gi~pg~rVlEAGtG--SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~D---v~~~~~~ 161 (256)
T COG2519 87 VARLGISPGSRVLEAGTG--SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGD---VREGIDE 161 (256)
T ss_pred HHHcCCCCCCEEEEcccC--chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecc---ccccccc
Confidence 346788999999887776 58899999998875 67776666553333334445555433221 123 3333334
Q ss_pred CCCeEEEecCCCc-h-HHHHHHhcccCcEEEEEe
Q psy2961 79 PKPKLALNCVGGN-S-ATNLLRTLVSKGVMVTYG 110 (202)
Q Consensus 79 ~~~d~vid~~g~~-~-~~~~~~~l~~~G~~v~~g 110 (202)
..+|.+|=-...| . ...+.+.|++||+++.+.
T Consensus 162 ~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~ 195 (256)
T COG2519 162 EDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYS 195 (256)
T ss_pred cccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEc
Confidence 5788876444443 3 345889999999999986
No 368
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.22 E-value=0.0091 Score=41.21 Aligned_cols=89 Identities=13% Similarity=0.243 Sum_probs=56.9
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHh--cCCceEeChhHHHhHHHhhCCCCCeEEE
Q psy2961 8 LSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKS--LGADYVFTEEELRNISRDASIPKPKLAL 85 (202)
Q Consensus 8 ~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~--lg~~~v~~~~~~~~~~~~~~~~~~d~vi 85 (202)
+-.|.+++|.|=| -+|.-.++.++.+|++|+++-..+- ..+++ -|... .. +.+.. ...|++|
T Consensus 20 ~l~Gk~vvV~GYG-~vG~g~A~~lr~~Ga~V~V~e~DPi------~alqA~~dGf~v-~~------~~~a~--~~adi~v 83 (162)
T PF00670_consen 20 MLAGKRVVVIGYG-KVGKGIARALRGLGARVTVTEIDPI------RALQAAMDGFEV-MT------LEEAL--RDADIFV 83 (162)
T ss_dssp --TTSEEEEE--S-HHHHHHHHHHHHTT-EEEEE-SSHH------HHHHHHHTT-EE-E-------HHHHT--TT-SEEE
T ss_pred eeCCCEEEEeCCC-cccHHHHHHHhhCCCEEEEEECChH------HHHHhhhcCcEe-cC------HHHHH--hhCCEEE
Confidence 4579999999999 9999999999999999888775542 33333 34432 21 22222 4679999
Q ss_pred ecCCCchH--HHHHHhcccCcEEEEEecc
Q psy2961 86 NCVGGNSA--TNLLRTLVSKGVMVTYGGM 112 (202)
Q Consensus 86 d~~g~~~~--~~~~~~l~~~G~~v~~g~~ 112 (202)
.++|.... .+-++.|+++.-+..+|..
T Consensus 84 taTG~~~vi~~e~~~~mkdgail~n~Gh~ 112 (162)
T PF00670_consen 84 TATGNKDVITGEHFRQMKDGAILANAGHF 112 (162)
T ss_dssp E-SSSSSSB-HHHHHHS-TTEEEEESSSS
T ss_pred ECCCCccccCHHHHHHhcCCeEEeccCcC
Confidence 99998764 4578889998888887743
No 369
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.00075 Score=50.46 Aligned_cols=37 Identities=16% Similarity=0.319 Sum_probs=32.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 46 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~ 46 (202)
.|.+|||+|+++++|..+++.+...|++|+.+.++.+
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~ 44 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRP 44 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChh
Confidence 5789999999999999999998889999998887653
No 370
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0037 Score=46.20 Aligned_cols=35 Identities=26% Similarity=0.313 Sum_probs=30.6
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 46 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~ 46 (202)
.+++|+|++|++|..++..+...|++|+.+.++++
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~ 36 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQS 36 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 57999999999999988888889999988887654
No 371
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.19 E-value=0.0039 Score=43.56 Aligned_cols=77 Identities=12% Similarity=0.160 Sum_probs=53.2
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCV 88 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~ 88 (202)
-.|.+|+|.|+|..+|..+++.+...|++++.+.++.+ ++.+ .. ..+|+||-++
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~---------------------~l~~---~l--~~aDiVIsat 95 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK---------------------NLKE---HT--KQADIVIVAV 95 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch---------------------hHHH---HH--hhCCEEEEcC
Confidence 47899999999955799899999999997665554321 1111 11 4679999999
Q ss_pred CCchHHHHHHhcccCcEEEEEecc
Q psy2961 89 GGNSATNLLRTLVSKGVMVTYGGM 112 (202)
Q Consensus 89 g~~~~~~~~~~l~~~G~~v~~g~~ 112 (202)
+.+... ....++++-.++.++.+
T Consensus 96 ~~~~ii-~~~~~~~~~viIDla~p 118 (168)
T cd01080 96 GKPGLV-KGDMVKPGAVVIDVGIN 118 (168)
T ss_pred CCCcee-cHHHccCCeEEEEccCC
Confidence 987732 23456777677777643
No 372
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.16 E-value=0.0057 Score=45.62 Aligned_cols=35 Identities=14% Similarity=0.167 Sum_probs=30.0
Q ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCCcEEEEecC
Q psy2961 10 PGDVVIQNGANS--ACGQNVIQIARHWGLKTINIVRN 44 (202)
Q Consensus 10 ~g~~VlI~g~~~--~vG~~~i~la~~~g~~vi~~~~~ 44 (202)
.+.+|||+|+++ ++|..++..+...|++|+.+.++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 457899999984 89999998888889999988776
No 373
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.15 E-value=0.0038 Score=47.68 Aligned_cols=35 Identities=14% Similarity=0.044 Sum_probs=28.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCc
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNR 45 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~ 45 (202)
.+.+++|+|+| ++|.+++..+...|++ ++.+.++.
T Consensus 125 ~~k~vlI~GAG-GagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAG-GAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 46899999996 9999999888899997 55555554
No 374
>KOG1210|consensus
Probab=97.14 E-value=0.0039 Score=47.33 Aligned_cols=81 Identities=14% Similarity=0.104 Sum_probs=54.8
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce-----------EeChhHHHh-HHH
Q psy2961 7 SLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-----------VFTEEELRN-ISR 74 (202)
Q Consensus 7 ~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-----------v~~~~~~~~-~~~ 74 (202)
+.++.-.|+|.|+++++|++++..++..|+.|..++++.+++.+ ..+.++... +.+|+..+. +.+
T Consensus 29 ~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~---a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~ 105 (331)
T KOG1210|consen 29 KPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLE---AKAELELLTQVEDVSYKSVDVIDYDSVSKVIEE 105 (331)
T ss_pred ccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHH---HHhhhhhhhccceeeEeccccccHHHHHHHHhh
Confidence 34555789999999999999999999999999999998874322 223333211 123443333 333
Q ss_pred hh-CCCCCeEEEecCCC
Q psy2961 75 DA-SIPKPKLALNCVGG 90 (202)
Q Consensus 75 ~~-~~~~~d~vid~~g~ 90 (202)
.- ....+|.+|.|.|.
T Consensus 106 l~~~~~~~d~l~~cAG~ 122 (331)
T KOG1210|consen 106 LRDLEGPIDNLFCCAGV 122 (331)
T ss_pred hhhccCCcceEEEecCc
Confidence 21 12468999999985
No 375
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.13 E-value=0.0072 Score=39.55 Aligned_cols=102 Identities=23% Similarity=0.334 Sum_probs=61.0
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCC-CcEEEEecCcccHHHHHHHHHhcCCceEe-ChhHHHh-HHHhhCCCCC
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWG-LKTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRN-ISRDASIPKP 81 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g-~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~-~~~~~~~~~~ 81 (202)
...+.++++|+-.|+| .|..+..+++..+ .+++++..++...+...+.++.++...+. -..+... .... ...+
T Consensus 14 ~~~~~~~~~vldlG~G--~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 89 (124)
T TIGR02469 14 KLRLRPGDVLWDIGAG--SGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDS--LPEP 89 (124)
T ss_pred HcCCCCCCEEEEeCCC--CCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhh--cCCC
Confidence 3456778899999997 4899999999864 56777766655332222333444433221 0111111 1111 1479
Q ss_pred eEEEecCCCch----HHHHHHhcccCcEEEEEe
Q psy2961 82 KLALNCVGGNS----ATNLLRTLVSKGVMVTYG 110 (202)
Q Consensus 82 d~vid~~g~~~----~~~~~~~l~~~G~~v~~g 110 (202)
|+|+-..+... +..+.+.|+++|.++...
T Consensus 90 D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 90 DRVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred CEEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 99987554333 234778999999998754
No 376
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.12 E-value=0.0045 Score=46.88 Aligned_cols=77 Identities=12% Similarity=0.173 Sum_probs=58.4
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCV 88 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~ 88 (202)
-.|.+|+|.|.|.-+|.-+++++...|++|+++.+... ++ .+.+ ..+|+||-++
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~l---~~~~--~~ADIVIsAv 209 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------DM---ASYL--KDADVIVSAV 209 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hH---HHHH--hhCCEEEECC
Confidence 36899999999977999999999999998887664321 11 1111 5679999999
Q ss_pred CCchHHHHHHhcccCcEEEEEecc
Q psy2961 89 GGNSATNLLRTLVSKGVMVTYGGM 112 (202)
Q Consensus 89 g~~~~~~~~~~l~~~G~~v~~g~~ 112 (202)
|.+.+... +.++++..++.+|..
T Consensus 210 g~p~~i~~-~~vk~gavVIDvGi~ 232 (286)
T PRK14175 210 GKPGLVTK-DVVKEGAVIIDVGNT 232 (286)
T ss_pred CCCcccCH-HHcCCCcEEEEcCCC
Confidence 99875433 568999888898854
No 377
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=97.12 E-value=0.0038 Score=46.93 Aligned_cols=34 Identities=12% Similarity=0.193 Sum_probs=29.9
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCc
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 45 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~ 45 (202)
.+++|+|+++++|..+++.+...|++|+.++++.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~ 35 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRS 35 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCc
Confidence 4789999999999999999999999998877553
No 378
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=97.11 E-value=0.053 Score=39.67 Aligned_cols=113 Identities=7% Similarity=-0.120 Sum_probs=65.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 89 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~g 89 (202)
.|.+|||.||| .++.-=++.+...|++|.+++..-.. ....+.+.|.-..+. .++.. .. . .++++||-|++
T Consensus 24 ~~~~VLVVGGG-~VA~RK~~~Ll~~gA~VtVVap~i~~---el~~l~~~~~i~~~~-r~~~~-~d-l--~g~~LViaATd 94 (223)
T PRK05562 24 NKIKVLIIGGG-KAAFIKGKTFLKKGCYVYILSKKFSK---EFLDLKKYGNLKLIK-GNYDK-EF-I--KDKHLIVIATD 94 (223)
T ss_pred CCCEEEEECCC-HHHHHHHHHHHhCCCEEEEEcCCCCH---HHHHHHhCCCEEEEe-CCCCh-HH-h--CCCcEEEECCC
Confidence 46799999999 88888778888899998877644321 222232223222221 11111 00 1 57899999999
Q ss_pred CchHHH-HHHhcccCcEEEEEeccCCCCcCCCcccccccC-eeEE
Q psy2961 90 GNSATN-LLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKD-ITLR 132 (202)
Q Consensus 90 ~~~~~~-~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~-~~~~ 132 (202)
.+.... +....+..+.++.+...+. ...+-.+..+.++ +++.
T Consensus 95 D~~vN~~I~~~a~~~~~lvn~vd~p~-~~dFi~PAiv~rg~l~Ia 138 (223)
T PRK05562 95 DEKLNNKIRKHCDRLYKLYIDCSDYK-KGLCIIPYQRSTKNFVFA 138 (223)
T ss_pred CHHHHHHHHHHHHHcCCeEEEcCCcc-cCeEEeeeEEecCCEEEE
Confidence 888877 4455555577776653332 2333334444443 4443
No 379
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.10 E-value=0.0056 Score=45.73 Aligned_cols=82 Identities=12% Similarity=0.161 Sum_probs=49.9
Q ss_pred CCCCEEEEeCCC--cHHHHHHHHHHHHCCCcEEEEecCc-----------ccHHHHHHHHHhcCCceEe---C---hhHH
Q psy2961 9 SPGDVVIQNGAN--SACGQNVIQIARHWGLKTINIVRNR-----------DDIDKLKSYLKSLGADYVF---T---EEEL 69 (202)
Q Consensus 9 ~~g~~VlI~g~~--~~vG~~~i~la~~~g~~vi~~~~~~-----------~~~~~~~~~~~~lg~~~v~---~---~~~~ 69 (202)
-.|.+++|+|++ +++|..+++.+...|++|+.++++. ++..+..+.+++.|..... | .++.
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i 83 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP 83 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 357899999998 4899999999999999988875321 1101112333445543222 2 3444
Q ss_pred Hh-HHHhhC-CCCCeEEEecCCC
Q psy2961 70 RN-ISRDAS-IPKPKLALNCVGG 90 (202)
Q Consensus 70 ~~-~~~~~~-~~~~d~vid~~g~ 90 (202)
.+ +.+... -+.+|++|.++|.
T Consensus 84 ~~~~~~~~~~~g~id~li~~ag~ 106 (256)
T PRK12859 84 KELLNKVTEQLGYPHILVNNAAY 106 (256)
T ss_pred HHHHHHHHHHcCCCcEEEECCCC
Confidence 44 333321 1468999998873
No 380
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.06 E-value=0.0053 Score=46.64 Aligned_cols=78 Identities=13% Similarity=0.144 Sum_probs=55.9
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEec
Q psy2961 8 LSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNC 87 (202)
Q Consensus 8 ~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~ 87 (202)
.-.|.+|+|.|.|+-+|..+++++...|+.| .+|.+.. .+ +.+.+ ..+|++|.+
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatV-tv~~~~t-----~~------------------L~~~~--~~aDIvI~A 209 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATV-TICHSRT-----QN------------------LPELV--KQADIIVGA 209 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEE-EEEeCCc-----hh------------------HHHHh--ccCCEEEEc
Confidence 3578999999999669999999999999954 4443321 11 11111 468999999
Q ss_pred CCCchHHHHHHhcccCcEEEEEecc
Q psy2961 88 VGGNSATNLLRTLVSKGVMVTYGGM 112 (202)
Q Consensus 88 ~g~~~~~~~~~~l~~~G~~v~~g~~ 112 (202)
+|.+... ..+.++++..++.+|..
T Consensus 210 tG~~~~v-~~~~lk~gavViDvg~n 233 (283)
T PRK14192 210 VGKPELI-KKDWIKQGAVVVDAGFH 233 (283)
T ss_pred cCCCCcC-CHHHcCCCCEEEEEEEe
Confidence 9876632 24678999999998844
No 381
>PLN02240 UDP-glucose 4-epimerase
Probab=97.06 E-value=0.0062 Score=47.64 Aligned_cols=80 Identities=13% Similarity=0.150 Sum_probs=47.7
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhc----C--CceEe-ChhHHHhHHHhhCCCCCeE
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL----G--ADYVF-TEEELRNISRDASIPKPKL 83 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~l----g--~~~v~-~~~~~~~~~~~~~~~~~d~ 83 (202)
+.+|+|.|++|.+|..+++.+...|.+|+++.+...........+... + ...+. |-.+...+.+.....++|+
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~ 84 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDA 84 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCCE
Confidence 578999999999999999988888999888865432111111222211 1 22222 2222222333332247899
Q ss_pred EEecCCC
Q psy2961 84 ALNCVGG 90 (202)
Q Consensus 84 vid~~g~ 90 (202)
||++++.
T Consensus 85 vih~a~~ 91 (352)
T PLN02240 85 VIHFAGL 91 (352)
T ss_pred EEEcccc
Confidence 9999863
No 382
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=97.06 E-value=0.0048 Score=47.79 Aligned_cols=37 Identities=22% Similarity=0.290 Sum_probs=32.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 46 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~ 46 (202)
.+.+|||+|++|.+|..+++.+...|++|++++++.+
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~ 40 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPK 40 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCc
Confidence 4689999999999999999999999999888776654
No 383
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=97.05 E-value=0.0034 Score=47.06 Aligned_cols=74 Identities=18% Similarity=0.237 Sum_probs=48.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE-eC---hhHHHh-HHHhhC-CCCCeE
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FT---EEELRN-ISRDAS-IPKPKL 83 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~~---~~~~~~-~~~~~~-~~~~d~ 83 (202)
.+.+++|+|+++++|.++++.+...|++|+.+.++++. .+ ......+ .| +.+... +.+... -+++|+
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~----~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 80 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGD----GQ---HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDG 80 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccc----cc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999999999999888766542 11 1111111 12 334433 333211 146899
Q ss_pred EEecCCC
Q psy2961 84 ALNCVGG 90 (202)
Q Consensus 84 vid~~g~ 90 (202)
+|.+.|.
T Consensus 81 li~~Ag~ 87 (266)
T PRK06171 81 LVNNAGI 87 (266)
T ss_pred EEECCcc
Confidence 9998873
No 384
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=97.03 E-value=0.006 Score=52.16 Aligned_cols=81 Identities=14% Similarity=0.178 Sum_probs=51.6
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHH-hcCCceE----eC---hhHHHh-HHHhhC-CC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK-SLGADYV----FT---EEELRN-ISRDAS-IP 79 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~-~lg~~~v----~~---~~~~~~-~~~~~~-~~ 79 (202)
.+.+|||+|++|++|.++++.+...|++|+.+.++.+...+..+.+. ..+...+ .| ..+... +.+... -+
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 47899999999999999999888899999988877653222222222 1232111 12 333333 333211 24
Q ss_pred CCeEEEecCCC
Q psy2961 80 KPKLALNCVGG 90 (202)
Q Consensus 80 ~~d~vid~~g~ 90 (202)
++|++|.++|.
T Consensus 493 ~iDilV~nAG~ 503 (676)
T TIGR02632 493 GVDIVVNNAGI 503 (676)
T ss_pred CCcEEEECCCC
Confidence 79999999874
No 385
>PRK07069 short chain dehydrogenase; Validated
Probab=97.02 E-value=0.0066 Score=44.98 Aligned_cols=78 Identities=15% Similarity=0.207 Sum_probs=47.4
Q ss_pred EEEEeCCCcHHHHHHHHHHHHCCCcEEEEecC-cccHHHHHHHHHhc-CCceE----eC---hhHHHh-HHHhhC-CCCC
Q psy2961 13 VVIQNGANSACGQNVIQIARHWGLKTINIVRN-RDDIDKLKSYLKSL-GADYV----FT---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~-~~~~~~~~~~~~~l-g~~~v----~~---~~~~~~-~~~~~~-~~~~ 81 (202)
+++|+|+++++|..+++.+...|++|+.+.++ .+..++..+.+++. +...+ .| .+.+.. +.+... -+++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 37999999999999999988899999888876 33221122222222 22111 12 233333 332211 2468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.++|.
T Consensus 81 d~vi~~ag~ 89 (251)
T PRK07069 81 SVLVNNAGV 89 (251)
T ss_pred cEEEECCCc
Confidence 999999873
No 386
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=97.01 E-value=0.0063 Score=44.79 Aligned_cols=76 Identities=13% Similarity=0.150 Sum_probs=47.1
Q ss_pred EEEeCCCcHHHHHHHHHHHHCCCcEEEEecCccc-HHHHHHHHHhcCCce-Ee--C---hhHHHh-HHHhh-CCCCCeEE
Q psy2961 14 VIQNGANSACGQNVIQIARHWGLKTINIVRNRDD-IDKLKSYLKSLGADY-VF--T---EEELRN-ISRDA-SIPKPKLA 84 (202)
Q Consensus 14 VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~-~~~~~~~~~~lg~~~-v~--~---~~~~~~-~~~~~-~~~~~d~v 84 (202)
|+|+|+++++|..+++.+...|++++.++++++. ..+..+.+++.+... ++ | .++... +.+.. ..+.+|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5899999999999999999999998888766432 112223334444321 11 2 333333 33321 12468999
Q ss_pred EecCC
Q psy2961 85 LNCVG 89 (202)
Q Consensus 85 id~~g 89 (202)
+.+.|
T Consensus 81 i~~ag 85 (239)
T TIGR01831 81 VLNAG 85 (239)
T ss_pred EECCC
Confidence 88876
No 387
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=97.01 E-value=0.0053 Score=44.60 Aligned_cols=101 Identities=22% Similarity=0.217 Sum_probs=59.4
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-ChhHHHh-HHHhhCCCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRN-ISRDASIPKP 81 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~-~~~~~~~~~~ 81 (202)
+..+++++++||-.|+|+ |..+..+++.. .+++++..+++......+.++.++...+. ...+..+ .. ....+
T Consensus 72 ~~l~~~~~~~VLeiG~Gs--G~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---~~~~f 145 (212)
T PRK00312 72 ELLELKPGDRVLEIGTGS--GYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWP---AYAPF 145 (212)
T ss_pred HhcCCCCCCEEEEECCCc--cHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCCC---cCCCc
Confidence 345678999999999874 55666666654 47777766654322223344445543221 1112111 11 12568
Q ss_pred eEEEecCCCchHH-HHHHhcccCcEEEEEe
Q psy2961 82 KLALNCVGGNSAT-NLLRTLVSKGVMVTYG 110 (202)
Q Consensus 82 d~vid~~g~~~~~-~~~~~l~~~G~~v~~g 110 (202)
|+|+-...-.... .+.+.|+++|+++..-
T Consensus 146 D~I~~~~~~~~~~~~l~~~L~~gG~lv~~~ 175 (212)
T PRK00312 146 DRILVTAAAPEIPRALLEQLKEGGILVAPV 175 (212)
T ss_pred CEEEEccCchhhhHHHHHhcCCCcEEEEEE
Confidence 9987655444433 3778999999998764
No 388
>PLN00016 RNA-binding protein; Provisional
Probab=97.01 E-value=0.0086 Score=47.53 Aligned_cols=98 Identities=13% Similarity=0.091 Sum_probs=62.5
Q ss_pred CCEEEEe----CCCcHHHHHHHHHHHHCCCcEEEEecCcccHHH-------HHHHHHhcCCceEe-ChhHHHhHHHhhCC
Q psy2961 11 GDVVIQN----GANSACGQNVIQIARHWGLKTINIVRNRDDIDK-------LKSYLKSLGADYVF-TEEELRNISRDASI 78 (202)
Q Consensus 11 g~~VlI~----g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~-------~~~~~~~lg~~~v~-~~~~~~~~~~~~~~ 78 (202)
..+|||+ |++|.+|..+++.+...|.+|++++++...... ....+...+...+. |..++..+ ...
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~---~~~ 128 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSK---VAG 128 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhh---hcc
Confidence 4579999 999999999999988899999999987652100 01122233455443 44443331 223
Q ss_pred CCCeEEEecCCCch--HHHHHHhcccC--cEEEEEec
Q psy2961 79 PKPKLALNCVGGNS--ATNLLRTLVSK--GVMVTYGG 111 (202)
Q Consensus 79 ~~~d~vid~~g~~~--~~~~~~~l~~~--G~~v~~g~ 111 (202)
.++|+||++.+... ...+++.++.. .++|.++.
T Consensus 129 ~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 129 AGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred CCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 57999999987543 22356655433 37887664
No 389
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=97.00 E-value=0.0065 Score=43.69 Aligned_cols=100 Identities=16% Similarity=0.119 Sum_probs=57.6
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-ChhHHHhHHHhhCCCCCeE
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRNISRDASIPKPKL 83 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~d~ 83 (202)
..+..++.+||-.|+| .|..+..+++. |.+|+++..+++..+...+.+...+...+. ...|+.. ..-...+|+
T Consensus 25 ~l~~~~~~~vLDiGcG--~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~---~~~~~~fD~ 98 (197)
T PRK11207 25 AVKVVKPGKTLDLGCG--NGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNN---LTFDGEYDF 98 (197)
T ss_pred hcccCCCCcEEEECCC--CCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhh---CCcCCCcCE
Confidence 3455677899999997 47788888875 888888877765322222222333332211 0112211 111246999
Q ss_pred EEecCCC----c-----hHHHHHHhcccCcEEEEEe
Q psy2961 84 ALNCVGG----N-----SATNLLRTLVSKGVMVTYG 110 (202)
Q Consensus 84 vid~~g~----~-----~~~~~~~~l~~~G~~v~~g 110 (202)
|+.+..- + .+..+.++|+|+|.++.+.
T Consensus 99 I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~ 134 (197)
T PRK11207 99 ILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 134 (197)
T ss_pred EEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 9876431 1 1223667899999976544
No 390
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=96.98 E-value=0.0078 Score=47.25 Aligned_cols=40 Identities=15% Similarity=0.182 Sum_probs=34.1
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc
Q psy2961 7 SLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 46 (202)
Q Consensus 7 ~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~ 46 (202)
+-..+.+|||+|++|.+|..+++.+...|.+|+++.++.+
T Consensus 6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~ 45 (353)
T PLN02896 6 RESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPA 45 (353)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChH
Confidence 3456789999999999999999998889999998876654
No 391
>PRK04148 hypothetical protein; Provisional
Probab=96.96 E-value=0.0061 Score=40.72 Aligned_cols=83 Identities=17% Similarity=0.137 Sum_probs=54.4
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHh--HHHhhCCCCCeEEEe
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN--ISRDASIPKPKLALN 86 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~--~~~~~~~~~~d~vid 86 (202)
..+.++++.|.| .|...+..+...|.+|+++..+++ ..+.+++.+.+.+.+. +.+ +... .++|+++.
T Consensus 15 ~~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~----aV~~a~~~~~~~v~dD--lf~p~~~~y---~~a~liys 83 (134)
T PRK04148 15 GKNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEK----AVEKAKKLGLNAFVDD--LFNPNLEIY---KNAKLIYS 83 (134)
T ss_pred ccCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHH----HHHHHHHhCCeEEECc--CCCCCHHHH---hcCCEEEE
Confidence 356789999998 576555566678999999988776 5777888877666532 111 1111 46788887
Q ss_pred cCCCchHHH-HHHhccc
Q psy2961 87 CVGGNSATN-LLRTLVS 102 (202)
Q Consensus 87 ~~g~~~~~~-~~~~l~~ 102 (202)
.-..+..+. ++++.+.
T Consensus 84 irpp~el~~~~~~la~~ 100 (134)
T PRK04148 84 IRPPRDLQPFILELAKK 100 (134)
T ss_pred eCCCHHHHHHHHHHHHH
Confidence 777666655 4444433
No 392
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.95 E-value=0.0032 Score=46.93 Aligned_cols=98 Identities=13% Similarity=0.111 Sum_probs=59.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-Hh-cCCceEe-ChhH-HHhHHHhhCCCCCeEEE
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KS-LGADYVF-TEEE-LRNISRDASIPKPKLAL 85 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~-lg~~~v~-~~~~-~~~~~~~~~~~~~d~vi 85 (202)
.+.+|+|+|++|.+|..+++.+...|.+|++++++.+. .... .. .++..+. |..+ ...+.+.. +.++|+||
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~----~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~-~~~~d~vi 90 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDK----AKTSLPQDPSLQIVRADVTEGSDKLVEAI-GDDSDAVI 90 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHH----HHHhcccCCceEEEEeeCCCCHHHHHHHh-hcCCCEEE
Confidence 46799999999999999998888889999988877652 2222 11 1232222 3222 12232322 13689999
Q ss_pred ecCCCch--------------HHHHHHhccc--CcEEEEEecc
Q psy2961 86 NCVGGNS--------------ATNLLRTLVS--KGVMVTYGGM 112 (202)
Q Consensus 86 d~~g~~~--------------~~~~~~~l~~--~G~~v~~g~~ 112 (202)
.+.|... ...+++.+.. .++++.++..
T Consensus 91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred ECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 8876421 1224444433 3688887754
No 393
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.94 E-value=0.0056 Score=47.38 Aligned_cols=37 Identities=19% Similarity=0.255 Sum_probs=32.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 46 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~ 46 (202)
.|.+|||+|++|.+|..+++.+...|.+|++++++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 40 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLT 40 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 4789999999999999999988888999988888765
No 394
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.94 E-value=0.0086 Score=43.57 Aligned_cols=103 Identities=17% Similarity=0.156 Sum_probs=64.5
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCC--CcEEEEecCcccHHHHHHHHHhcCCceEeC--h-hHHHh-HHHhhC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWG--LKTINIVRNRDDIDKLKSYLKSLGADYVFT--E-EELRN-ISRDAS 77 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g--~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~--~-~~~~~-~~~~~~ 77 (202)
..++.+...+||=.|.+ +|..++.+|..+. .+++++-.+++..+..++.+++.|.+..+. . .+..+ +.+ ..
T Consensus 53 ~L~~~~~~k~iLEiGT~--~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~-~~ 129 (219)
T COG4122 53 LLARLSGPKRILEIGTA--IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSR-LL 129 (219)
T ss_pred HHHHhcCCceEEEeecc--cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHh-cc
Confidence 34556778899888875 7999999999886 344444444443333344456667765331 2 24444 544 22
Q ss_pred CCCCeEEE-ecCCCc--hH-HHHHHhcccCcEEEEE
Q psy2961 78 IPKPKLAL-NCVGGN--SA-TNLLRTLVSKGVMVTY 109 (202)
Q Consensus 78 ~~~~d~vi-d~~g~~--~~-~~~~~~l~~~G~~v~~ 109 (202)
.+.||+|| |+.-.. .+ ..++++|++||.++.=
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~D 165 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVAD 165 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence 36799975 444322 23 3478999999998874
No 395
>PLN00015 protochlorophyllide reductase
Probab=96.94 E-value=0.0061 Score=46.96 Aligned_cols=73 Identities=18% Similarity=0.164 Sum_probs=45.3
Q ss_pred EEeCCCcHHHHHHHHHHHHCC-CcEEEEecCcccHHHHHHHHHhcC---Cce-E--eC---hhHHHh-HHHhhC-CCCCe
Q psy2961 15 IQNGANSACGQNVIQIARHWG-LKTINIVRNRDDIDKLKSYLKSLG---ADY-V--FT---EEELRN-ISRDAS-IPKPK 82 (202)
Q Consensus 15 lI~g~~~~vG~~~i~la~~~g-~~vi~~~~~~~~~~~~~~~~~~lg---~~~-v--~~---~~~~~~-~~~~~~-~~~~d 82 (202)
+|+|+++++|..+++.+...| ++|+.++++.+.. .+.+.+++ ... + .| .++... +.+... ..++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~---~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD 77 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKA---ERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLD 77 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHH---HHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCC
Confidence 589999999999998888889 8888888766532 12223332 111 1 13 233333 333221 24689
Q ss_pred EEEecCCC
Q psy2961 83 LALNCVGG 90 (202)
Q Consensus 83 ~vid~~g~ 90 (202)
++|+++|.
T Consensus 78 ~lInnAG~ 85 (308)
T PLN00015 78 VLVCNAAV 85 (308)
T ss_pred EEEECCCc
Confidence 99998873
No 396
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=96.94 E-value=0.089 Score=38.45 Aligned_cols=107 Identities=16% Similarity=0.189 Sum_probs=72.0
Q ss_pred CCCCCEEEEeCCCc--HHHHHHHHHHHHCCCcEEEEecCcccHHHHH-HHHHhcCCceEe--C---hhHH---Hh-HHHh
Q psy2961 8 LSPGDVVIQNGANS--ACGQNVIQIARHWGLKTINIVRNRDDIDKLK-SYLKSLGADYVF--T---EEEL---RN-ISRD 75 (202)
Q Consensus 8 ~~~g~~VlI~g~~~--~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~-~~~~~lg~~~v~--~---~~~~---~~-~~~~ 75 (202)
+-.|++.||.|-+. +++--.++.++..|++...+...+ .+.++. +.++++|.+.++ | .++. .+ +++.
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~ 81 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK 81 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence 34689999998654 667778999999999998888776 344443 445778887666 2 2222 22 4444
Q ss_pred hCCCCCeEEEecCCCch------------------------------HHHHHHhcccCcEEEEEeccCCCCc
Q psy2961 76 ASIPKPKLALNCVGGNS------------------------------ATNLLRTLVSKGVMVTYGGMSREPV 117 (202)
Q Consensus 76 ~~~~~~d~vid~~g~~~------------------------------~~~~~~~l~~~G~~v~~g~~~~~~~ 117 (202)
. +++|.++.+.+... ...+..+|..||.++.+........
T Consensus 82 ~--g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~ 151 (259)
T COG0623 82 W--GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERV 151 (259)
T ss_pred h--CcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceee
Confidence 4 57899998887321 1124557889999999876655443
No 397
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=96.93 E-value=0.0034 Score=46.12 Aligned_cols=77 Identities=17% Similarity=0.267 Sum_probs=47.7
Q ss_pred EEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc-cHHHHHHHHHhcCCceE-e--C---hhHHHh-HHHhhC-CCCCeEE
Q psy2961 14 VIQNGANSACGQNVIQIARHWGLKTINIVRNRD-DIDKLKSYLKSLGADYV-F--T---EEELRN-ISRDAS-IPKPKLA 84 (202)
Q Consensus 14 VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~-~~~~~~~~~~~lg~~~v-~--~---~~~~~~-~~~~~~-~~~~d~v 84 (202)
|||+|++|++|..+++.+...|++++.+.++.. ...+..+.++..+.... + | ..++.+ +..... -.++|.+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 589999999999999999889999988877652 21112233344453221 1 2 223333 222111 1468999
Q ss_pred EecCCC
Q psy2961 85 LNCVGG 90 (202)
Q Consensus 85 id~~g~ 90 (202)
|.+.|.
T Consensus 81 i~~ag~ 86 (239)
T TIGR01830 81 VNNAGI 86 (239)
T ss_pred EECCCC
Confidence 998874
No 398
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=96.93 E-value=0.016 Score=41.04 Aligned_cols=78 Identities=15% Similarity=0.188 Sum_probs=43.4
Q ss_pred EEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcc---cHHHHHHHHHhcCCceEe------ChhHHHh-HHHhhC-CCC
Q psy2961 13 VVIQNGANSACGQNVIQIARHWGLK-TINIVRNRD---DIDKLKSYLKSLGADYVF------TEEELRN-ISRDAS-IPK 80 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~---~~~~~~~~~~~lg~~~v~------~~~~~~~-~~~~~~-~~~ 80 (202)
++||+|+.|++|...++.+...++. ++.+.++.. ...+..+.+++.|....+ |++++.. +..... .+.
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 6899999999999999888888774 555555511 222244555666665333 2334444 333322 246
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
++.||.+.|.
T Consensus 82 i~gVih~ag~ 91 (181)
T PF08659_consen 82 IDGVIHAAGV 91 (181)
T ss_dssp EEEEEE----
T ss_pred cceeeeeeee
Confidence 7888887764
No 399
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=96.92 E-value=0.0077 Score=46.85 Aligned_cols=78 Identities=10% Similarity=0.057 Sum_probs=46.2
Q ss_pred EEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCC---ceE-eChhHHHhHHHhhCCCCCeEEEecC
Q psy2961 13 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA---DYV-FTEEELRNISRDASIPKPKLALNCV 88 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~---~~v-~~~~~~~~~~~~~~~~~~d~vid~~ 88 (202)
+|||+|++|.+|..+++.+...|.+|+++.+...........+.+++. ..+ .|-.+...+.+.....++|+||+++
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~a 81 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHFA 81 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEECC
Confidence 689999999999999988888899998876543221111222233322 111 1322222233333234799999987
Q ss_pred CC
Q psy2961 89 GG 90 (202)
Q Consensus 89 g~ 90 (202)
+.
T Consensus 82 ~~ 83 (338)
T PRK10675 82 GL 83 (338)
T ss_pred cc
Confidence 63
No 400
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.92 E-value=0.019 Score=40.87 Aligned_cols=96 Identities=22% Similarity=0.224 Sum_probs=56.3
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHC-C-CcEEEEecCcccHHHHHHHHHhcCCceEe-Ch--hHHHh-HHHhhCC
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHW-G-LKTINIVRNRDDIDKLKSYLKSLGADYVF-TE--EELRN-ISRDASI 78 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~-g-~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~~--~~~~~-~~~~~~~ 78 (202)
...+++|++||..|+|+ |..+..+++.. + .+++++..++. + ...+...+. |. .+..+ +.+.+..
T Consensus 27 ~~~i~~g~~VLDiG~Gt--G~~~~~l~~~~~~~~~v~~vDis~~-----~---~~~~i~~~~~d~~~~~~~~~l~~~~~~ 96 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAP--GGWSQVAVEQVGGKGRVIAVDLQPM-----K---PIENVDFIRGDFTDEEVLNKIRERVGD 96 (188)
T ss_pred hcccCCCCEEEEecCCC--CHHHHHHHHHhCCCceEEEEecccc-----c---cCCCceEEEeeCCChhHHHHHHHHhCC
Confidence 45578999999999984 45566666654 3 35666655543 1 112333222 22 12223 4555555
Q ss_pred CCCeEEEe-cC----CCc-------------hHHHHHHhcccCcEEEEEe
Q psy2961 79 PKPKLALN-CV----GGN-------------SATNLLRTLVSKGVMVTYG 110 (202)
Q Consensus 79 ~~~d~vid-~~----g~~-------------~~~~~~~~l~~~G~~v~~g 110 (202)
.++|+|+. .. |.. .+..+.++|+++|+++...
T Consensus 97 ~~~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 97 DKVDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred CCccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 67999995 22 211 1223678999999999854
No 401
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.92 E-value=0.013 Score=45.52 Aligned_cols=101 Identities=5% Similarity=0.120 Sum_probs=63.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHH-HHHCCCcEEEEecCcccHHHHHHHHHh----cCCceEeChhHHHh-HHHhhCCCCCeE
Q psy2961 10 PGDVVIQNGANSACGQNVIQI-ARHWGLKTINIVRNRDDIDKLKSYLKS----LGADYVFTEEELRN-ISRDASIPKPKL 83 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~l-a~~~g~~vi~~~~~~~~~~~~~~~~~~----lg~~~v~~~~~~~~-~~~~~~~~~~d~ 83 (202)
...+++|+|+| ..|.+.+.. +...+++.+.++++..+. ..+.+++ ++.+.. ...+..+ + .+.|+
T Consensus 126 ~~~~v~iiGaG-~~a~~~~~al~~~~~~~~v~v~~r~~~~--a~~~~~~~~~~~~~~~~-~~~~~~~~~------~~aDi 195 (325)
T PRK08618 126 DAKTLCLIGTG-GQAKGQLEAVLAVRDIERVRVYSRTFEK--AYAFAQEIQSKFNTEIY-VVNSADEAI------EEADI 195 (325)
T ss_pred CCcEEEEECCc-HHHHHHHHHHHhcCCccEEEEECCCHHH--HHHHHHHHHHhcCCcEE-EeCCHHHHH------hcCCE
Confidence 45689999999 788776654 446688777777655421 1222222 343321 1233333 3 46799
Q ss_pred EEecCCCchHHHHHHhcccCcEEEEEeccCCCCcCCCc
Q psy2961 84 ALNCVGGNSATNLLRTLVSKGVMVTYGGMSREPVQIPT 121 (202)
Q Consensus 84 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 121 (202)
|+.|++.....-. .++++|-+++.+|........++.
T Consensus 196 Vi~aT~s~~p~i~-~~l~~G~hV~~iGs~~p~~~E~~~ 232 (325)
T PRK08618 196 IVTVTNAKTPVFS-EKLKKGVHINAVGSFMPDMQELPS 232 (325)
T ss_pred EEEccCCCCcchH-HhcCCCcEEEecCCCCcccccCCH
Confidence 9999987754445 899999999999866544434444
No 402
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.91 E-value=0.011 Score=43.64 Aligned_cols=105 Identities=15% Similarity=0.187 Sum_probs=67.3
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCC-CcEEEEecCcccHHHHHHHHHhcCCceEe-ChhHHHhHHHhhCCCCCe
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWG-LKTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRNISRDASIPKPK 82 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g-~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~d 82 (202)
...+.+|++||=.++| +|-.+..+++..| ++|+++.-+++-+...++.+++.|...+- ...|.+.+. .+...||
T Consensus 46 ~~~~~~g~~vLDva~G--TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LP--f~D~sFD 121 (238)
T COG2226 46 LLGIKPGDKVLDVACG--TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLP--FPDNSFD 121 (238)
T ss_pred hhCCCCCCEEEEecCC--ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCC--CCCCccC
Confidence 3455689999888775 6999999999887 46777777766443344444454433211 112222211 3346789
Q ss_pred EEEecCCCc-------hHHHHHHhcccCcEEEEEeccC
Q psy2961 83 LALNCVGGN-------SATNLLRTLVSKGVMVTYGGMS 113 (202)
Q Consensus 83 ~vid~~g~~-------~~~~~~~~l~~~G~~v~~g~~~ 113 (202)
+|.-+.|-. .+.+..+.|+|+|+++.+-...
T Consensus 122 ~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~ 159 (238)
T COG2226 122 AVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK 159 (238)
T ss_pred EEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence 998777632 2344788999999999886443
No 403
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.91 E-value=0.0075 Score=46.30 Aligned_cols=33 Identities=12% Similarity=0.193 Sum_probs=29.9
Q ss_pred CCCEEEEeCCC--cHHHHHHHHHHHHCCCcEEEEe
Q psy2961 10 PGDVVIQNGAN--SACGQNVIQIARHWGLKTINIV 42 (202)
Q Consensus 10 ~g~~VlI~g~~--~~vG~~~i~la~~~g~~vi~~~ 42 (202)
.|++++|+|++ +++|.++++.+...|++|+...
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~ 41 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGT 41 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEe
Confidence 58899999996 8999999999999999998854
No 404
>PRK08309 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.061 Score=37.97 Aligned_cols=87 Identities=11% Similarity=0.048 Sum_probs=50.7
Q ss_pred EEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcCC--c-eE--eC---hhHHHh-HHHhhC-CCCC
Q psy2961 13 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGA--D-YV--FT---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~--~-~v--~~---~~~~~~-~~~~~~-~~~~ 81 (202)
+++|+|++ ++|..+++.+...|++|+++.++++. .+.+ ..++. . .. .| +.+... +..... .+++
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~----~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~i 76 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVK----LENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPF 76 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHH----HHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 58999998 56666777777789999888876643 2222 22321 1 11 13 344444 443322 2568
Q ss_pred eEEEecCCCchHHHHHHhcccCc
Q psy2961 82 KLALNCVGGNSATNLLRTLVSKG 104 (202)
Q Consensus 82 d~vid~~g~~~~~~~~~~l~~~G 104 (202)
|++|+.+-......+....+..|
T Consensus 77 d~lv~~vh~~~~~~~~~~~~~~g 99 (177)
T PRK08309 77 DLAVAWIHSSAKDALSVVCRELD 99 (177)
T ss_pred eEEEEeccccchhhHHHHHHHHc
Confidence 99999887665444444444444
No 405
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=96.90 E-value=0.0066 Score=47.14 Aligned_cols=75 Identities=9% Similarity=0.107 Sum_probs=44.9
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC--CcEEEEecCcccHHHHHHHH-HhcC---CceEe-ChhHHHhHHHhhCCCCCe
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWG--LKTINIVRNRDDIDKLKSYL-KSLG---ADYVF-TEEELRNISRDASIPKPK 82 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g--~~vi~~~~~~~~~~~~~~~~-~~lg---~~~v~-~~~~~~~~~~~~~~~~~d 82 (202)
.|.+|||+|++|.+|..+++.+...| .+|+++.++... ...+ ..+. ...+. |-.+...+.+.. .++|
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~----~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~--~~iD 76 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELK----QWEMQQKFPAPCLRFFIGDVRDKERLTRAL--RGVD 76 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhH----HHHHHHHhCCCcEEEEEccCCCHHHHHHHH--hcCC
Confidence 36799999999999999888777665 567766655432 2222 2222 11221 222222233333 3589
Q ss_pred EEEecCCC
Q psy2961 83 LALNCVGG 90 (202)
Q Consensus 83 ~vid~~g~ 90 (202)
+||.++|.
T Consensus 77 ~Vih~Ag~ 84 (324)
T TIGR03589 77 YVVHAAAL 84 (324)
T ss_pred EEEECccc
Confidence 99998873
No 406
>PRK07041 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.0079 Score=44.01 Aligned_cols=72 Identities=17% Similarity=0.128 Sum_probs=45.2
Q ss_pred EEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCc-eEe--C---hhHHHh-HHHhhCCCCCeEEEec
Q psy2961 15 IQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD-YVF--T---EEELRN-ISRDASIPKPKLALNC 87 (202)
Q Consensus 15 lI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~-~v~--~---~~~~~~-~~~~~~~~~~d~vid~ 87 (202)
||+|+++++|..+++.+...|++|+.+.++++...+..+.++ .+.. .++ | ..+... +.+ . +.+|++|.+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~-~--~~id~li~~ 76 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALG-GGAPVRTAALDITDEAAVDAFFAE-A--GPFDHVVIT 76 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHh-c--CCCCEEEEC
Confidence 589999999999999988999999998877553211111121 1222 122 3 233333 332 2 468999998
Q ss_pred CCC
Q psy2961 88 VGG 90 (202)
Q Consensus 88 ~g~ 90 (202)
+|.
T Consensus 77 ag~ 79 (230)
T PRK07041 77 AAD 79 (230)
T ss_pred CCC
Confidence 874
No 407
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.88 E-value=0.011 Score=44.85 Aligned_cols=92 Identities=18% Similarity=0.133 Sum_probs=55.0
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHH-HhcCCceEeCh-hHHHhHHHhhCCCCCeEEE
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYL-KSLGADYVFTE-EELRNISRDASIPKPKLAL 85 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~-~~lg~~~v~~~-~~~~~~~~~~~~~~~d~vi 85 (202)
..+.+|+|+|+| ++|.+++..+...|+ +++++.++.+ +.+.+ +.++....+.. .+..+ .. .++|+||
T Consensus 121 ~~~k~vlVlGaG-g~a~ai~~aL~~~g~~~V~v~~R~~~----~a~~l~~~~~~~~~~~~~~~~~~---~~--~~~DivI 190 (278)
T PRK00258 121 LKGKRILILGAG-GAARAVILPLLDLGVAEITIVNRTVE----RAEELAKLFGALGKAELDLELQE---EL--ADFDLII 190 (278)
T ss_pred CCCCEEEEEcCc-HHHHHHHHHHHHcCCCEEEEEeCCHH----HHHHHHHHhhhccceeecccchh---cc--ccCCEEE
Confidence 356789999996 999999999999995 6666666554 23333 33322110100 01111 11 4689999
Q ss_pred ecCCCchHH------HHHHhcccCcEEEEEe
Q psy2961 86 NCVGGNSAT------NLLRTLVSKGVMVTYG 110 (202)
Q Consensus 86 d~~g~~~~~------~~~~~l~~~G~~v~~g 110 (202)
+|++..... .....+.+...++.+.
T Consensus 191 naTp~g~~~~~~~~~~~~~~l~~~~~v~Div 221 (278)
T PRK00258 191 NATSAGMSGELPLPPLPLSLLRPGTIVYDMI 221 (278)
T ss_pred ECCcCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence 998644311 1245677777777765
No 408
>PRK07023 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.0033 Score=46.49 Aligned_cols=34 Identities=18% Similarity=0.319 Sum_probs=30.4
Q ss_pred EEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc
Q psy2961 13 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 46 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~ 46 (202)
++||+|++|++|..+++.+...|++++.++++.+
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~ 36 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRH 36 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcc
Confidence 7999999999999999988889999998887654
No 409
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=96.86 E-value=0.014 Score=43.55 Aligned_cols=35 Identities=23% Similarity=0.285 Sum_probs=27.9
Q ss_pred EEEEeCCCcHHHHHHHHHHHH----CCCcEEEEecCccc
Q psy2961 13 VVIQNGANSACGQNVIQIARH----WGLKTINIVRNRDD 47 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~----~g~~vi~~~~~~~~ 47 (202)
.++|+|+++++|..+++.+.. .|++|+.+.++.+.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~ 40 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEA 40 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHH
Confidence 589999999999987754443 79999988887664
No 410
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.86 E-value=0.017 Score=41.76 Aligned_cols=35 Identities=26% Similarity=0.223 Sum_probs=29.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCc
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 45 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~ 45 (202)
...+|+|.|+| ++|..+++.+...|...+.+++.+
T Consensus 20 ~~~~VlviG~G-glGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAG-GLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCC-HHHHHHHHHHHHcCCCeEEEecCC
Confidence 45789999999 999999999999999777777655
No 411
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=96.86 E-value=0.0029 Score=47.34 Aligned_cols=72 Identities=10% Similarity=0.044 Sum_probs=49.3
Q ss_pred EEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-ChhHHHhHHHhhCCCCCeEEEecCC
Q psy2961 13 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRNISRDASIPKPKLALNCVG 89 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~d~vid~~g 89 (202)
+|||+||+| -|..++..+...|.+|++.+.++.. .+.+...|...+. +.-+..++.+.....++|+|||++.
T Consensus 2 ~ILvlGGT~-egr~la~~L~~~g~~v~~s~~t~~~----~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtH 74 (256)
T TIGR00715 2 TVLLMGGTV-DSRAIAKGLIAQGIEILVTVTTSEG----KHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATH 74 (256)
T ss_pred eEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCc----cccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCC
Confidence 799999995 5999998888889999998888763 4555566555444 2111111333334468999999886
No 412
>PLN02214 cinnamoyl-CoA reductase
Probab=96.85 E-value=0.0077 Score=47.15 Aligned_cols=38 Identities=26% Similarity=0.352 Sum_probs=33.5
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 46 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~ 46 (202)
.++.+|||+|++|.+|..+++.+...|.+|++++++.+
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~ 45 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPD 45 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCch
Confidence 35789999999999999999999999999999887654
No 413
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.012 Score=42.82 Aligned_cols=75 Identities=13% Similarity=0.067 Sum_probs=45.9
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHH-hc-CCceEe-ChhHHHhHHHhhCC-CCCeEEEe
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK-SL-GADYVF-TEEELRNISRDASI-PKPKLALN 86 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~-~l-g~~~v~-~~~~~~~~~~~~~~-~~~d~vid 86 (202)
..++||+|++|++|..++..+... .+|+.+.++.++ .+.+. .. +...+. |-.+...+.+.... .++|.+|.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 77 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAER----LDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVH 77 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHH----HHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEE
Confidence 358999999999999988777666 889988877653 22222 22 222221 22222222222221 36999999
Q ss_pred cCCC
Q psy2961 87 CVGG 90 (202)
Q Consensus 87 ~~g~ 90 (202)
++|.
T Consensus 78 ~ag~ 81 (227)
T PRK08219 78 NAGV 81 (227)
T ss_pred CCCc
Confidence 9874
No 414
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=96.84 E-value=0.014 Score=43.08 Aligned_cols=77 Identities=14% Similarity=0.181 Sum_probs=47.7
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhc---CCc-eEe--C---hhHHHh-HHHhhC-CCC
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL---GAD-YVF--T---EEELRN-ISRDAS-IPK 80 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~l---g~~-~v~--~---~~~~~~-~~~~~~-~~~ 80 (202)
.+|+|+|++|++|..+++.+...|++|+.+.++++. ...+....+ +.. .++ | .+.... +..... ..+
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 80 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGND--CAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGP 80 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHH--HHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 479999999999999999888889999988877431 112222222 221 111 2 233333 332211 246
Q ss_pred CeEEEecCCC
Q psy2961 81 PKLALNCVGG 90 (202)
Q Consensus 81 ~d~vid~~g~ 90 (202)
+|++|.+.|.
T Consensus 81 id~vi~~ag~ 90 (245)
T PRK12824 81 VDILVNNAGI 90 (245)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 415
>PRK14967 putative methyltransferase; Provisional
Probab=96.84 E-value=0.022 Score=41.74 Aligned_cols=99 Identities=13% Similarity=0.110 Sum_probs=56.6
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEE
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLA 84 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~v 84 (202)
..++++++||-.|+|+ |..++.+++. ++ +++++..+++......+.++..+....+...|+.+ ......+|+|
T Consensus 32 ~~~~~~~~vLDlGcG~--G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~---~~~~~~fD~V 105 (223)
T PRK14967 32 EGLGPGRRVLDLCTGS--GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWAR---AVEFRPFDVV 105 (223)
T ss_pred cccCCCCeEEEecCCH--HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhh---hccCCCeeEE
Confidence 3467899999999973 8888888875 55 66666655542211122223344332222233322 1223578998
Q ss_pred EecCCCc----------------------------hHHHHHHhcccCcEEEEEe
Q psy2961 85 LNCVGGN----------------------------SATNLLRTLVSKGVMVTYG 110 (202)
Q Consensus 85 id~~g~~----------------------------~~~~~~~~l~~~G~~v~~g 110 (202)
+...... .+..+.+.|+++|+++.+.
T Consensus 106 i~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~ 159 (223)
T PRK14967 106 VSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ 159 (223)
T ss_pred EECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 8642100 0123567899999998754
No 416
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=96.83 E-value=0.011 Score=43.83 Aligned_cols=72 Identities=18% Similarity=0.121 Sum_probs=47.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCc--eEe-C---hhHHHh-HHHhhC-CCCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGAD--YVF-T---EEELRN-ISRDAS-IPKP 81 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~--~v~-~---~~~~~~-~~~~~~-~~~~ 81 (202)
.+.++||+|+++++|..+++.+...|++|+.+.++. +...+.. .+. | .+++.. +.+... .+++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPL 77 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999888999998887654 1111211 111 2 333333 333211 2468
Q ss_pred eEEEecCCC
Q psy2961 82 KLALNCVGG 90 (202)
Q Consensus 82 d~vid~~g~ 90 (202)
|++|.+.|.
T Consensus 78 d~vi~~ag~ 86 (252)
T PRK08220 78 DVLVNAAGI 86 (252)
T ss_pred CEEEECCCc
Confidence 999999874
No 417
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.82 E-value=0.0063 Score=46.12 Aligned_cols=94 Identities=19% Similarity=0.156 Sum_probs=53.5
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHhcCC-ceEeChhHHHhHHHhhCCC-CCeEEE
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKSLGA-DYVFTEEELRNISRDASIP-KPKLAL 85 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~~~-~~d~vi 85 (202)
.+|++|+|.|+| |.+.+++.-++..|++ ++++.++.++.++..+...+.+. .......++. .. .+|++|
T Consensus 124 ~~~~~vlilGAG-GAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~-------~~~~~dliI 195 (283)
T COG0169 124 VTGKRVLILGAG-GAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLE-------GLEEADLLI 195 (283)
T ss_pred cCCCEEEEECCc-HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccccc-------cccccCEEE
Confidence 358999999999 8899999999999975 45555555432111222222222 1111111111 12 589999
Q ss_pred ecCCCchHH------HHHHhcccCcEEEEEe
Q psy2961 86 NCVGGNSAT------NLLRTLVSKGVMVTYG 110 (202)
Q Consensus 86 d~~g~~~~~------~~~~~l~~~G~~v~~g 110 (202)
+|++-.... -...++++.-.+..+.
T Consensus 196 NaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~v 226 (283)
T COG0169 196 NATPVGMAGPEGDSPVPAELLPKGAIVYDVV 226 (283)
T ss_pred ECCCCCCCCCCCCCCCcHHhcCcCCEEEEec
Confidence 998632211 0145666666666664
No 418
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.81 E-value=0.013 Score=45.35 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=31.2
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCc
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 45 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~ 45 (202)
.|.+|.|+|.| .+|...++.++.+|++|++..++.
T Consensus 135 ~g~tvgIvG~G-~IG~~vA~~l~afG~~V~~~~~~~ 169 (312)
T PRK15469 135 EDFTIGILGAG-VLGSKVAQSLQTWGFPLRCWSRSR 169 (312)
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 67899999999 999999999999999998876544
No 419
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=96.79 E-value=0.0034 Score=45.98 Aligned_cols=70 Identities=16% Similarity=0.354 Sum_probs=47.8
Q ss_pred EEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHH-hcCCceEe-C---hhHHHh-HHHhhCCCCCeEEEec
Q psy2961 14 VIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK-SLGADYVF-T---EEELRN-ISRDASIPKPKLALNC 87 (202)
Q Consensus 14 VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~-~lg~~~v~-~---~~~~~~-~~~~~~~~~~d~vid~ 87 (202)
|||+||+|-+|..++..+...|..|+.+.++... ..... ......+. | .+.+.+ +.. .++|.||.+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~~~~~~dl~~~~~~~~~~~~----~~~d~vi~~ 72 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNS----ESFEEKKLNVEFVIGDLTDKEQLEKLLEK----ANIDVVIHL 72 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTG----GHHHHHHTTEEEEESETTSHHHHHHHHHH----HTESEEEEE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccc----cccccccceEEEEEeeccccccccccccc----cCceEEEEe
Confidence 7999999999999999999999999988887764 22221 12322222 2 233333 333 378999999
Q ss_pred CCCc
Q psy2961 88 VGGN 91 (202)
Q Consensus 88 ~g~~ 91 (202)
++..
T Consensus 73 a~~~ 76 (236)
T PF01370_consen 73 AAFS 76 (236)
T ss_dssp BSSS
T ss_pred eccc
Confidence 8863
No 420
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=96.75 E-value=0.0078 Score=46.34 Aligned_cols=78 Identities=9% Similarity=0.060 Sum_probs=44.6
Q ss_pred EEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhc-CCceEe-ChhHHHhHHHhhCCCCCeEEEecCCC
Q psy2961 13 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL-GADYVF-TEEELRNISRDASIPKPKLALNCVGG 90 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~l-g~~~v~-~~~~~~~~~~~~~~~~~d~vid~~g~ 90 (202)
+|||+|++|.+|..+++.+...|.+|+.+.+......++.....+. +...+. |..+...+.+.....++|+||+++|.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 4899999999999999999889999887654322111111111111 111211 22222212222222579999999874
No 421
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=96.75 E-value=0.0094 Score=46.58 Aligned_cols=35 Identities=11% Similarity=0.270 Sum_probs=31.1
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 46 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~ 46 (202)
++|||+||+|.+|..+++.+...|.+|+++.++.+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence 47999999999999999999999999998887653
No 422
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.75 E-value=0.012 Score=44.79 Aligned_cols=76 Identities=14% Similarity=0.088 Sum_probs=43.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEe-cCcccHHHHHHHHHhcCCce-EeChhHHHhHHHhhCCCCCeEEEec
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIV-RNRDDIDKLKSYLKSLGADY-VFTEEELRNISRDASIPKPKLALNC 87 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~-~~~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~~~~~d~vid~ 87 (202)
.+.+|+|+|+| +.|.+++.-+...|++.+.++ ++.++ ..+.++.++... +.......++.... ..+|+||+|
T Consensus 124 ~~k~vlvlGaG-Gaarai~~aL~~~G~~~i~I~nRt~~k---a~~La~~~~~~~~~~~~~~~~~~~~~~--~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGAG-GTSRAAVYALASLGVTDITVINRNPDK---LSRLVDLGVQVGVITRLEGDSGGLAIE--KAAEVLVST 197 (282)
T ss_pred CCceEEEEcCc-HHHHHHHHHHHHcCCCeEEEEeCCHHH---HHHHHHHhhhcCcceeccchhhhhhcc--cCCCEEEEC
Confidence 57899999998 889999988889998655444 44432 223333343211 11101001111111 468999999
Q ss_pred CCCc
Q psy2961 88 VGGN 91 (202)
Q Consensus 88 ~g~~ 91 (202)
++..
T Consensus 198 Tp~g 201 (282)
T TIGR01809 198 VPAD 201 (282)
T ss_pred CCCC
Confidence 8654
No 423
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=96.74 E-value=0.012 Score=45.34 Aligned_cols=37 Identities=22% Similarity=0.327 Sum_probs=32.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 46 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~ 46 (202)
.+.+|||+|++|.+|..++..+...|.+|++++++.+
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~ 39 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPN 39 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCC
Confidence 3578999999999999999999999999988887655
No 424
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=96.74 E-value=0.0046 Score=47.76 Aligned_cols=71 Identities=17% Similarity=0.256 Sum_probs=47.7
Q ss_pred EEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-ChhHHHhHHHhhCCCCCeEEEecCC
Q psy2961 13 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRNISRDASIPKPKLALNCVG 89 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~d~vid~~g 89 (202)
+|+|.|++|.+|..+++.+...|.+|+++.++++. ...+...+...+. |..+...+.+.. .++|+||++++
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~~~~~~~~~D~~~~~~l~~~~--~~~d~vi~~a~ 73 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSD----RRNLEGLDVEIVEGDLRDPASLRKAV--AGCRALFHVAA 73 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcc----ccccccCCceEEEeeCCCHHHHHHHH--hCCCEEEEece
Confidence 68999999999999999999999999999887652 2223333444333 222222233333 36799999875
No 425
>PRK07574 formate dehydrogenase; Provisional
Probab=96.74 E-value=0.024 Score=45.09 Aligned_cols=35 Identities=26% Similarity=0.258 Sum_probs=31.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCc
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 45 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~ 45 (202)
.|.+|.|.|.| .+|..+++.++.+|.+|++..++.
T Consensus 191 ~gktVGIvG~G-~IG~~vA~~l~~fG~~V~~~dr~~ 225 (385)
T PRK07574 191 EGMTVGIVGAG-RIGLAVLRRLKPFDVKLHYTDRHR 225 (385)
T ss_pred CCCEEEEECCC-HHHHHHHHHHHhCCCEEEEECCCC
Confidence 67899999999 899999999999999998887654
No 426
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.74 E-value=0.018 Score=41.03 Aligned_cols=98 Identities=18% Similarity=0.152 Sum_probs=58.3
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCcEEEEecCcccHHHHHHHHHhcCCceEe-ChhHHHhHHHhhCCCCCeEEE
Q psy2961 8 LSPGDVVIQNGANSACGQNVIQIARHW-GLKTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRNISRDASIPKPKLAL 85 (202)
Q Consensus 8 ~~~g~~VlI~g~~~~vG~~~i~la~~~-g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~d~vi 85 (202)
++++.+||-.|+|+ |..++.+++.. +++|+++..+++......+.++..+.+.+- -..+..++ .....+|+|+
T Consensus 43 l~~g~~VLDiGcGt--G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~---~~~~~fDlV~ 117 (187)
T PRK00107 43 LPGGERVLDVGSGA--GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEF---GQEEKFDVVT 117 (187)
T ss_pred cCCCCeEEEEcCCC--CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhC---CCCCCccEEE
Confidence 45689999999874 66666666644 567777776665332233444455554321 11222221 1135799998
Q ss_pred ecCCCc--hH-HHHHHhcccCcEEEEEe
Q psy2961 86 NCVGGN--SA-TNLLRTLVSKGVMVTYG 110 (202)
Q Consensus 86 d~~g~~--~~-~~~~~~l~~~G~~v~~g 110 (202)
-..... .+ ..+.++|+|+|+++.+-
T Consensus 118 ~~~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 118 SRAVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred EccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 643322 22 23678999999999874
No 427
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=96.72 E-value=0.016 Score=44.00 Aligned_cols=92 Identities=8% Similarity=0.039 Sum_probs=56.0
Q ss_pred EEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-ChhHHHhHHHhh----CCCC-CeEEEe
Q psy2961 13 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRNISRDA----SIPK-PKLALN 86 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~----~~~~-~d~vid 86 (202)
+|+|+|++|.+|..+++.+...|.+|.+++++++. .. ..+...+. |..|...+.+.. .-.+ +|.++-
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~----~~---~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~ 73 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSS----SA---GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYL 73 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcc----cc---CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEE
Confidence 48999999999999999988899999999988763 11 12333222 333322222222 1135 898887
Q ss_pred cCCCc-----hHHHHHHhcccCc--EEEEEec
Q psy2961 87 CVGGN-----SATNLLRTLVSKG--VMVTYGG 111 (202)
Q Consensus 87 ~~g~~-----~~~~~~~~l~~~G--~~v~~g~ 111 (202)
+.+.. ....+++.++..| ++|.++.
T Consensus 74 ~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 74 VAPPIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred eCCCCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 76532 1223445444443 6777764
No 428
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=96.72 E-value=0.0078 Score=43.52 Aligned_cols=101 Identities=16% Similarity=0.163 Sum_probs=60.2
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCcEEEEecCcccHHHHHHHHHhcCCceEeC--hhHHHh-HHHhhC---C
Q psy2961 7 SLSPGDVVIQNGANSACGQNVIQIARHW--GLKTINIVRNRDDIDKLKSYLKSLGADYVFT--EEELRN-ISRDAS---I 78 (202)
Q Consensus 7 ~~~~g~~VlI~g~~~~vG~~~i~la~~~--g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~--~~~~~~-~~~~~~---~ 78 (202)
+.....+||-.|.+ +|+.++.+|+.+ +.+++++-.+++..+...+.++..|...-+. ..+..+ +.+... .
T Consensus 42 ~~~~~k~vLEIGt~--~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gda~~~l~~l~~~~~~ 119 (205)
T PF01596_consen 42 RLTRPKRVLEIGTF--TGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGDALEVLPELANDGEE 119 (205)
T ss_dssp HHHT-SEEEEESTT--TSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES-HHHHHHHHHHTTTT
T ss_pred HhcCCceEEEeccc--cccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEeccHhhHHHHHhccCC
Confidence 33456789999886 789999999876 4677777766654333344555556532221 122223 333221 2
Q ss_pred CCCeEEE-ecCCCch---HHHHHHhcccCcEEEEE
Q psy2961 79 PKPKLAL-NCVGGNS---ATNLLRTLVSKGVMVTY 109 (202)
Q Consensus 79 ~~~d~vi-d~~g~~~---~~~~~~~l~~~G~~v~~ 109 (202)
+.||+|| |+.-..+ +..++++|++||.++.=
T Consensus 120 ~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~D 154 (205)
T PF01596_consen 120 GQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIAD 154 (205)
T ss_dssp TSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred CceeEEEEcccccchhhHHHHHhhhccCCeEEEEc
Confidence 4699975 5543332 23367899999998874
No 429
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.71 E-value=0.032 Score=41.03 Aligned_cols=94 Identities=12% Similarity=0.200 Sum_probs=57.3
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCc--EEEEecCc----ccH----HH-HHHHHHhcCCceEeChhHHHhHHHhhC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLK--TINIVRNR----DDI----DK-LKSYLKSLGADYVFTEEELRNISRDAS 77 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~--vi~~~~~~----~~~----~~-~~~~~~~lg~~~v~~~~~~~~~~~~~~ 77 (202)
-.+.+|+|+|+| +.|..++..+...|++ .+.++++. ... .+ +.+.++.++... .+ .++.+ ..
T Consensus 23 l~~~rvlvlGAG-gAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~-~~l~~---~l- 95 (226)
T cd05311 23 IEEVKIVINGAG-AAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG-GTLKE---AL- 95 (226)
T ss_pred ccCCEEEEECch-HHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc-CCHHH---HH-
Confidence 356899999998 8999999888888987 66666555 211 11 133344443221 11 12322 12
Q ss_pred CCCCeEEEecCCCchH-HHHHHhcccCcEEEEEe
Q psy2961 78 IPKPKLALNCVGGNSA-TNLLRTLVSKGVMVTYG 110 (202)
Q Consensus 78 ~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g 110 (202)
.++|++|.+++...+ ...++.|.++..+..+.
T Consensus 96 -~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 96 -KGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred -hcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 347999999973333 24677777776666554
No 430
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.70 E-value=0.014 Score=40.03 Aligned_cols=95 Identities=17% Similarity=0.131 Sum_probs=56.3
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC-CcEEEEecCcccHHHHHHHHHhcCCceE-eChhHHHhHHHhhCCCCCeEEEe
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWG-LKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEELRNISRDASIPKPKLALN 86 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g-~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~~~~~d~vid 86 (202)
..+.+|+|.|+| .+|...++.+...| .++++..++.+. ..+..++++...+ ....+..+ . -.++|+|+.
T Consensus 17 ~~~~~i~iiG~G-~~g~~~a~~l~~~g~~~v~v~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~---~--~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAG-GAARAVAYALAELGAAKIVIVNRTLEK---AKALAERFGELGIAIAYLDLEE---L--LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECCc-HHHHHHHHHHHHCCCCEEEEEcCCHHH---HHHHHHHHhhcccceeecchhh---c--cccCCEEEe
Confidence 456889999996 89999998888886 455555544432 2233444543210 11122211 1 157899999
Q ss_pred cCCCchH---H--HHHHhcccCcEEEEEecc
Q psy2961 87 CVGGNSA---T--NLLRTLVSKGVMVTYGGM 112 (202)
Q Consensus 87 ~~g~~~~---~--~~~~~l~~~G~~v~~g~~ 112 (202)
|++.... . .....++++..++.++..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~ 118 (155)
T cd01065 88 TTPVGMKPGDELPLPPSLLKPGGVVYDVVYN 118 (155)
T ss_pred CcCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence 9976653 1 123456777777777543
No 431
>PLN02244 tocopherol O-methyltransferase
Probab=96.70 E-value=0.0096 Score=46.61 Aligned_cols=100 Identities=14% Similarity=0.124 Sum_probs=61.1
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCce-Ee-ChhHHHhHHHhhCCCCCeEEEe
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADY-VF-TEEELRNISRDASIPKPKLALN 86 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-v~-~~~~~~~~~~~~~~~~~d~vid 86 (202)
+++++||=.|+| .|..+..+++..|++|+++.-++.......+.+++.+... +. -..|..++ ......||+|+-
T Consensus 117 ~~~~~VLDiGCG--~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~--~~~~~~FD~V~s 192 (340)
T PLN02244 117 KRPKRIVDVGCG--IGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQ--PFEDGQFDLVWS 192 (340)
T ss_pred CCCCeEEEecCC--CCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccC--CCCCCCccEEEE
Confidence 688999988886 5778888998889999999877764322223333333321 11 01111110 112357999986
Q ss_pred cCCCc-------hHHHHHHhcccCcEEEEEecc
Q psy2961 87 CVGGN-------SATNLLRTLVSKGVMVTYGGM 112 (202)
Q Consensus 87 ~~g~~-------~~~~~~~~l~~~G~~v~~g~~ 112 (202)
..... .+.++.+.|+|||+++.+...
T Consensus 193 ~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~~ 225 (340)
T PLN02244 193 MESGEHMPDKRKFVQELARVAAPGGRIIIVTWC 225 (340)
T ss_pred CCchhccCCHHHHHHHHHHHcCCCcEEEEEEec
Confidence 44322 223467899999999987543
No 432
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.70 E-value=0.018 Score=43.86 Aligned_cols=92 Identities=14% Similarity=0.072 Sum_probs=52.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcC----CceEeChhHHHhHHHhhCCCCCeEE
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLG----ADYVFTEEELRNISRDASIPKPKLA 84 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg----~~~v~~~~~~~~~~~~~~~~~~d~v 84 (202)
.+.+|+|.|+| ++|.+++..+...|++.+.++++... +.+.+ +.++ ...+...++..+ .. .++|+|
T Consensus 126 ~~k~vlIlGaG-Gaaraia~aL~~~G~~~I~I~nR~~~---ka~~la~~l~~~~~~~~~~~~~~~~~---~~--~~aDiV 196 (284)
T PRK12549 126 SLERVVQLGAG-GAGAAVAHALLTLGVERLTIFDVDPA---RAAALADELNARFPAARATAGSDLAA---AL--AAADGL 196 (284)
T ss_pred cCCEEEEECCc-HHHHHHHHHHHHcCCCEEEEECCCHH---HHHHHHHHHHhhCCCeEEEeccchHh---hh--CCCCEE
Confidence 46799999999 89999999999999965555554432 22222 3332 112222222211 11 468999
Q ss_pred EecCCCc-----hHHHHHHhcccCcEEEEEe
Q psy2961 85 LNCVGGN-----SATNLLRTLVSKGVMVTYG 110 (202)
Q Consensus 85 id~~g~~-----~~~~~~~~l~~~G~~v~~g 110 (202)
|+|+... ...-....+++...++.+.
T Consensus 197 InaTp~Gm~~~~~~~~~~~~l~~~~~v~Div 227 (284)
T PRK12549 197 VHATPTGMAKHPGLPLPAELLRPGLWVADIV 227 (284)
T ss_pred EECCcCCCCCCCCCCCCHHHcCCCcEEEEee
Confidence 9996421 1100134566666665554
No 433
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=96.69 E-value=0.0036 Score=48.87 Aligned_cols=37 Identities=19% Similarity=0.325 Sum_probs=32.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 46 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~ 46 (202)
++.+|||+|++|.+|..+++.+...|.+|+++.++.+
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~ 41 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS 41 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence 4678999999999999999999999999998877543
No 434
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=96.68 E-value=0.018 Score=42.63 Aligned_cols=102 Identities=12% Similarity=0.147 Sum_probs=58.8
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCC--CcEEEEecCcccHHHHHHHHHhcCCceEeC--hhHHHh-HHHhhC--
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWG--LKTINIVRNRDDIDKLKSYLKSLGADYVFT--EEELRN-ISRDAS-- 77 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g--~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~--~~~~~~-~~~~~~-- 77 (202)
..+..+.++||-.|.+ .|..++.+++..+ .+++++-.+++......+.++..|...-+. ..+..+ +.+...
T Consensus 63 l~~~~~~~~vLEiGt~--~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L~~l~~~~ 140 (234)
T PLN02781 63 LVKIMNAKNTLEIGVF--TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQLLNND 140 (234)
T ss_pred HHHHhCCCEEEEecCc--ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHHhCC
Confidence 3455678899998886 5666677777653 467776666553322334445556432121 123333 333321
Q ss_pred -CCCCeEEEecCCCc----hHHHHHHhcccCcEEEE
Q psy2961 78 -IPKPKLALNCVGGN----SATNLLRTLVSKGVMVT 108 (202)
Q Consensus 78 -~~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~ 108 (202)
...||+||--...+ .+..+++++++||.++.
T Consensus 141 ~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~ 176 (234)
T PLN02781 141 PKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAF 176 (234)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 25799987543322 22336889999998775
No 435
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.67 E-value=0.0073 Score=40.00 Aligned_cols=96 Identities=15% Similarity=0.139 Sum_probs=53.3
Q ss_pred EEEEeCCCcHHHHHHHHHHHH-CCCcEEEEecCcccHHHHHHHHHhcCC--ceEeChhHHHhHHHhhCCCCCeEEEecCC
Q psy2961 13 VVIQNGANSACGQNVIQIARH-WGLKTINIVRNRDDIDKLKSYLKSLGA--DYVFTEEELRNISRDASIPKPKLALNCVG 89 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~-~g~~vi~~~~~~~~~~~~~~~~~~lg~--~~v~~~~~~~~~~~~~~~~~~d~vid~~g 89 (202)
+|.|+|++|-+|..+++.+.. .+.++.+++.+........+.-.-.|. ..+..+.++.+ .. ..+|++||++.
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~---~~--~~~DVvIDfT~ 76 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEE---LL--EEADVVIDFTN 76 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHH---HT--TH-SEEEEES-
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHH---hc--ccCCEEEEcCC
Confidence 689999977999999999987 678877777665410000011111111 11111233333 22 22799999996
Q ss_pred CchHHHHHHhcccCcEEEEEeccC
Q psy2961 90 GNSATNLLRTLVSKGVMVTYGGMS 113 (202)
Q Consensus 90 ~~~~~~~~~~l~~~G~~v~~g~~~ 113 (202)
.+.....++.+...|.-+.+|...
T Consensus 77 p~~~~~~~~~~~~~g~~~ViGTTG 100 (124)
T PF01113_consen 77 PDAVYDNLEYALKHGVPLVIGTTG 100 (124)
T ss_dssp HHHHHHHHHHHHHHT-EEEEE-SS
T ss_pred hHHhHHHHHHHHhCCCCEEEECCC
Confidence 555556666555557777777443
No 436
>PLN02928 oxidoreductase family protein
Probab=96.67 E-value=0.018 Score=45.13 Aligned_cols=35 Identities=26% Similarity=0.328 Sum_probs=31.2
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRN 44 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~ 44 (202)
-.|.+|.|+|.| .+|..+++.++.+|++|++..++
T Consensus 157 l~gktvGIiG~G-~IG~~vA~~l~afG~~V~~~dr~ 191 (347)
T PLN02928 157 LFGKTVFILGYG-AIGIELAKRLRPFGVKLLATRRS 191 (347)
T ss_pred CCCCEEEEECCC-HHHHHHHHHHhhCCCEEEEECCC
Confidence 358899999999 99999999999999999887655
No 437
>PLN02476 O-methyltransferase
Probab=96.66 E-value=0.027 Score=42.62 Aligned_cols=102 Identities=14% Similarity=0.107 Sum_probs=61.6
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCC--CcEEEEecCcccHHHHHHHHHhcCCceEeC--hhHHHh-HHHhh---
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWG--LKTINIVRNRDDIDKLKSYLKSLGADYVFT--EEELRN-ISRDA--- 76 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g--~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~--~~~~~~-~~~~~--- 76 (202)
..+..+.++||-.|.+ +|..++.+|+.++ .+++++-.+++..+...+.+++.|...-+. ..+..+ +.+..
T Consensus 113 L~~~~~ak~VLEIGT~--tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L~~l~~~~ 190 (278)
T PLN02476 113 LVQILGAERCIEVGVY--TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGLAAESLKSMIQNG 190 (278)
T ss_pred HHHhcCCCeEEEecCC--CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcc
Confidence 3456678899999886 6888888888763 456666666553333445556667653221 233333 43321
Q ss_pred CCCCCeEEEecCCCch----HHHHHHhcccCcEEEE
Q psy2961 77 SIPKPKLALNCVGGNS----ATNLLRTLVSKGVMVT 108 (202)
Q Consensus 77 ~~~~~d~vid~~g~~~----~~~~~~~l~~~G~~v~ 108 (202)
....||.||--..... +..+++.|++||.++.
T Consensus 191 ~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~ 226 (278)
T PLN02476 191 EGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVM 226 (278)
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 1246999754443322 2336889999999876
No 438
>PLN03139 formate dehydrogenase; Provisional
Probab=96.66 E-value=0.023 Score=45.17 Aligned_cols=35 Identities=20% Similarity=0.186 Sum_probs=30.7
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRN 44 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~ 44 (202)
-.|.+|.|.|.| .+|...++.++.+|+++++..++
T Consensus 197 L~gktVGIVG~G-~IG~~vA~~L~afG~~V~~~d~~ 231 (386)
T PLN03139 197 LEGKTVGTVGAG-RIGRLLLQRLKPFNCNLLYHDRL 231 (386)
T ss_pred CCCCEEEEEeec-HHHHHHHHHHHHCCCEEEEECCC
Confidence 368899999998 89999999999999998876554
No 439
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=96.66 E-value=0.01 Score=44.17 Aligned_cols=103 Identities=16% Similarity=0.213 Sum_probs=60.5
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC--cEEEEecCcccHHHHHHHHHhcCCceEe--ChhHHH-h-HHHhhCC
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGL--KTINIVRNRDDIDKLKSYLKSLGADYVF--TEEELR-N-ISRDASI 78 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~--~vi~~~~~~~~~~~~~~~~~~lg~~~v~--~~~~~~-~-~~~~~~~ 78 (202)
..++.||++|+=.|.|| |.++..+++..|. +|+..-.+++..+...+.++.+|....+ ...|.. + ..+.. .
T Consensus 35 ~l~i~pG~~VlEaGtGS--G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~~~-~ 111 (247)
T PF08704_consen 35 RLDIRPGSRVLEAGTGS--GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDEEL-E 111 (247)
T ss_dssp HTT--TT-EEEEE--TT--SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--STT--T
T ss_pred HcCCCCCCEEEEecCCc--HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccccccc-c
Confidence 46789999999988764 8888888887763 6777776665433334444566664222 123332 1 21111 2
Q ss_pred CCCeEEEecCCCc--hHHHHHHhc-ccCcEEEEEe
Q psy2961 79 PKPKLALNCVGGN--SATNLLRTL-VSKGVMVTYG 110 (202)
Q Consensus 79 ~~~d~vid~~g~~--~~~~~~~~l-~~~G~~v~~g 110 (202)
..+|.||=-...| ....+.+.| ++||+++.+.
T Consensus 112 ~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fs 146 (247)
T PF08704_consen 112 SDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFS 146 (247)
T ss_dssp TSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEE
T ss_pred CcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEEC
Confidence 4688876544444 344588999 8999999986
No 440
>PLN02686 cinnamoyl-CoA reductase
Probab=96.66 E-value=0.0092 Score=47.21 Aligned_cols=38 Identities=16% Similarity=0.191 Sum_probs=33.4
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 46 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~ 46 (202)
..+++|||+|++|.+|..+++.+...|++|++++++.+
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~ 88 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQE 88 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45789999999999999999999999999988777654
No 441
>KOG1203|consensus
Probab=96.64 E-value=0.03 Score=44.55 Aligned_cols=108 Identities=19% Similarity=0.318 Sum_probs=65.9
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHH----hcCCceEeC----hhHHHh-HHHhhCCC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLK----SLGADYVFT----EEELRN-ISRDASIP 79 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~----~lg~~~v~~----~~~~~~-~~~~~~~~ 79 (202)
..-..|+|.||+|.+|+.+++.++..|..|.+.++..++ ..+.++ .++...+.. ..|... +.+.. ..
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~---a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~-~~ 152 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQK---AEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAV-PK 152 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhh---hhhhhcccccccccceeeeccccccchhhhhhhhc-cc
Confidence 345689999999999999999999999999999988764 344444 333333322 122222 22221 12
Q ss_pred CCeEEEecCCCch---------------HHHHHHhcccCc--EEEEEeccCCCCcCCC
Q psy2961 80 KPKLALNCVGGNS---------------ATNLLRTLVSKG--VMVTYGGMSREPVQIP 120 (202)
Q Consensus 80 ~~d~vid~~g~~~---------------~~~~~~~l~~~G--~~v~~g~~~~~~~~~~ 120 (202)
+..+++.|.|+.. ...+++++...| +++++|.........+
T Consensus 153 ~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~ 210 (411)
T KOG1203|consen 153 GVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQP 210 (411)
T ss_pred cceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCC
Confidence 4556666665321 122445544444 8888887766544333
No 442
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.64 E-value=0.0084 Score=38.29 Aligned_cols=87 Identities=14% Similarity=0.227 Sum_probs=56.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 89 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~g 89 (202)
.|.+|||.|+| .+|..-++.+...|+++++++...+ ..+ +.-... ...+.+ . -.++|+||-+++
T Consensus 6 ~~~~vlVvGgG-~va~~k~~~Ll~~gA~v~vis~~~~-------~~~--~~i~~~-~~~~~~---~--l~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGGG-PVAARKARLLLEAGAKVTVISPEIE-------FSE--GLIQLI-RREFEE---D--LDGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEES-HHHHHHHHHHCCCTBEEEEEESSEH-------HHH--TSCEEE-ESS-GG---G--CTTESEEEE-SS
T ss_pred CCCEEEEECCC-HHHHHHHHHHHhCCCEEEEECCchh-------hhh--hHHHHH-hhhHHH---H--HhhheEEEecCC
Confidence 57899999998 9999999999999999888875531 111 111111 112211 1 157899999999
Q ss_pred CchHHH-HHHhcccCcEEEEEecc
Q psy2961 90 GNSATN-LLRTLVSKGVMVTYGGM 112 (202)
Q Consensus 90 ~~~~~~-~~~~l~~~G~~v~~g~~ 112 (202)
.+.... +....+..|.++.+...
T Consensus 70 d~~~n~~i~~~a~~~~i~vn~~D~ 93 (103)
T PF13241_consen 70 DPELNEAIYADARARGILVNVVDD 93 (103)
T ss_dssp -HHHHHHHHHHHHHTTSEEEETT-
T ss_pred CHHHHHHHHHHHhhCCEEEEECCC
Confidence 888776 55666778888887643
No 443
>PLN02427 UDP-apiose/xylose synthase
Probab=96.62 E-value=0.016 Score=46.06 Aligned_cols=75 Identities=11% Similarity=-0.013 Sum_probs=46.9
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCcEEEEecCcccHHHHHHHHHhcC-------CceEe-ChhHHHhHHHhhCCC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHW-GLKTINIVRNRDDIDKLKSYLKSLG-------ADYVF-TEEELRNISRDASIP 79 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~-g~~vi~~~~~~~~~~~~~~~~~~lg-------~~~v~-~~~~~~~~~~~~~~~ 79 (202)
-+..+|||+|++|.+|..+++.+... |.+|+++.++.+ +...+...+ .+.+. |-.+...+.+.. .
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~----~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~--~ 85 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYND----KIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLI--K 85 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCch----hhhhhhccccccCCCCeEEEEcCCCChHHHHHHh--h
Confidence 34468999999999999999888877 588888876554 233333222 12221 212222233333 3
Q ss_pred CCeEEEecCC
Q psy2961 80 KPKLALNCVG 89 (202)
Q Consensus 80 ~~d~vid~~g 89 (202)
++|+||.+++
T Consensus 86 ~~d~ViHlAa 95 (386)
T PLN02427 86 MADLTINLAA 95 (386)
T ss_pred cCCEEEEccc
Confidence 5899999886
No 444
>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase
Probab=96.62 E-value=0.067 Score=43.12 Aligned_cols=96 Identities=14% Similarity=0.219 Sum_probs=62.8
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCcEEEEecCcccHHHHHHHHHhcCCceEeC--hh---HHH--------------
Q psy2961 12 DVVIQNGANSACGQNVIQIARHW--GLKTINIVRNRDDIDKLKSYLKSLGADYVFT--EE---ELR-------------- 70 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~--g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~--~~---~~~-------------- 70 (202)
.+|.|+|++|++|..++.+.+.. .++|++.+...+ .+...++++++.+..+.- .. .+.
T Consensus 58 KkI~ILGSTGSIGtqtLdVI~~~pd~f~vvaLaag~N-i~lL~~q~~~f~p~~v~v~d~~~~~~l~~~l~~~~~~~~vl~ 136 (454)
T PLN02696 58 KPISLLGSTGSIGTQTLDIVAENPDKFKVVALAAGSN-VTLLADQVRKFKPKLVAVRNESLVDELKEALADLDDKPEIIP 136 (454)
T ss_pred cEEEEecCCcHhhHHHHHHHHhCccccEEEEEECCCC-HHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhcCCCCCcEEEE
Confidence 48999999999999999998865 466777766553 344567777888876662 21 111
Q ss_pred --h-HHHhhCCCCCeEEEecCCCchHH-HHHHhcccCcEEEE
Q psy2961 71 --N-ISRDASIPKPKLALNCVGGNSAT-NLLRTLVSKGVMVT 108 (202)
Q Consensus 71 --~-~~~~~~~~~~d~vid~~g~~~~~-~~~~~l~~~G~~v~ 108 (202)
+ +.+......+|+|+.+.+|-... ..+..++.|=++.+
T Consensus 137 G~egl~~la~~~evDiVV~AIvG~aGL~pTl~AIkaGK~VAL 178 (454)
T PLN02696 137 GEEGIVEVARHPEAVTVVTGIVGCAGLKPTVAAIEAGKDIAL 178 (454)
T ss_pred CHHHHHHHHcCCCCCEEEEeCccccchHHHHHHHHCCCcEEE
Confidence 1 22333335689999988775433 35666666655443
No 445
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.60 E-value=0.016 Score=43.95 Aligned_cols=77 Identities=10% Similarity=0.154 Sum_probs=58.2
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCV 88 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~ 88 (202)
-.|.+|+|.|.+..+|.-++.++...|+.|+.+.+... ++.+ .+ ...|+|+-++
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~---------------------~l~~---~~--~~ADIVV~av 209 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR---------------------DLAA---HT--RQADIVVAAV 209 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC---------------------CHHH---Hh--hhCCEEEEcC
Confidence 37899999999988899999999999998876532211 1111 11 4679999999
Q ss_pred CCchHHHHHHhcccCcEEEEEecc
Q psy2961 89 GGNSATNLLRTLVSKGVMVTYGGM 112 (202)
Q Consensus 89 g~~~~~~~~~~l~~~G~~v~~g~~ 112 (202)
|.+.+.. -++++++..++.+|..
T Consensus 210 G~~~~i~-~~~ik~gavVIDVGin 232 (285)
T PRK14189 210 GKRNVLT-ADMVKPGATVIDVGMN 232 (285)
T ss_pred CCcCccC-HHHcCCCCEEEEcccc
Confidence 9887644 3889999999999843
No 446
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.60 E-value=0.013 Score=46.59 Aligned_cols=89 Identities=16% Similarity=0.189 Sum_probs=50.6
Q ss_pred EEEeCCCcHHHHHHHHHHHHCCC--cEEEEecCcccHHHHHHHHH-h-cCC--ceE-eChhHHHhHHHhhCCCCCeEEEe
Q psy2961 14 VIQNGANSACGQNVIQIARHWGL--KTINIVRNRDDIDKLKSYLK-S-LGA--DYV-FTEEELRNISRDASIPKPKLALN 86 (202)
Q Consensus 14 VlI~g~~~~vG~~~i~la~~~g~--~vi~~~~~~~~~~~~~~~~~-~-lg~--~~v-~~~~~~~~~~~~~~~~~~d~vid 86 (202)
|+|+|+ |.+|..+++.+...+- ++++..++.+ +.+.+. + .+. ..+ +|-.+..++.+.. .+.|+||+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~----~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~--~~~dvVin 73 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPE----KAERLAEKLLGDRVEAVQVDVNDPESLAELL--RGCDVVIN 73 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHH----HHHHHHT--TTTTEEEEE--TTTHHHHHHHH--TTSSEEEE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHH----HHHHHHhhccccceeEEEEecCCHHHHHHHH--hcCCEEEE
Confidence 789999 6999999998887764 5555555544 333442 2 222 211 1322322244444 45699999
Q ss_pred cCCCchHHH-HHHhcccCcEEEEE
Q psy2961 87 CVGGNSATN-LLRTLVSKGVMVTY 109 (202)
Q Consensus 87 ~~g~~~~~~-~~~~l~~~G~~v~~ 109 (202)
|+|...... +..|+..+-+++..
T Consensus 74 ~~gp~~~~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 74 CAGPFFGEPVARACIEAGVHYVDT 97 (386)
T ss_dssp -SSGGGHHHHHHHHHHHT-EEEES
T ss_pred CCccchhHHHHHHHHHhCCCeecc
Confidence 999775444 44577778888883
No 447
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=96.60 E-value=0.0064 Score=40.04 Aligned_cols=95 Identities=13% Similarity=0.138 Sum_probs=55.7
Q ss_pred EEEEeCCCcHHHHHHHHHHHH-CCCcEEEEecCcccHHHHHHHHHh-c-CC-ceEeChhHHHhHHHhhCCCCCeEEEecC
Q psy2961 13 VVIQNGANSACGQNVIQIARH-WGLKTINIVRNRDDIDKLKSYLKS-L-GA-DYVFTEEELRNISRDASIPKPKLALNCV 88 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~-~g~~vi~~~~~~~~~~~~~~~~~~-l-g~-~~v~~~~~~~~~~~~~~~~~~d~vid~~ 88 (202)
+|.|.|++|-+|..+++++.. -.++++.++++............. + +. +..+...+ .... .++|+||.|+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~Dvvf~a~ 74 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDAD---PEEL---SDVDVVFLAL 74 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETS---GHHH---TTESEEEE-S
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecc---hhHh---hcCCEEEecC
Confidence 589999999999998888775 456777766665411001222211 0 11 11111101 1111 6789999999
Q ss_pred CCchHHHHH-HhcccCcEEEEEeccC
Q psy2961 89 GGNSATNLL-RTLVSKGVMVTYGGMS 113 (202)
Q Consensus 89 g~~~~~~~~-~~l~~~G~~v~~g~~~ 113 (202)
+.....+.. .++..|-+++..+...
T Consensus 75 ~~~~~~~~~~~~~~~g~~ViD~s~~~ 100 (121)
T PF01118_consen 75 PHGASKELAPKLLKAGIKVIDLSGDF 100 (121)
T ss_dssp CHHHHHHHHHHHHHTTSEEEESSSTT
T ss_pred chhHHHHHHHHHhhCCcEEEeCCHHH
Confidence 988777755 4556777888766433
No 448
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.60 E-value=0.035 Score=40.73 Aligned_cols=95 Identities=14% Similarity=0.103 Sum_probs=56.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhC-CCCCeEEEec-
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDAS-IPKPKLALNC- 87 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~-~~~~d~vid~- 87 (202)
+|.+||=.|+||| + +.+-+...|+.|+++.-+++..+.....+.+-|.. ++|.... +.+... ++.||+|+.-
T Consensus 59 ~g~~vLDvGCGgG--~-Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~-~edl~~~~~~FDvV~cmE 132 (243)
T COG2227 59 PGLRVLDVGCGGG--I-LSEPLARLGASVTGIDASEKPIEVAKLHALESGVN--IDYRQAT-VEDLASAGGQFDVVTCME 132 (243)
T ss_pred CCCeEEEecCCcc--H-hhHHHHHCCCeeEEecCChHHHHHHHHhhhhcccc--ccchhhh-HHHHHhcCCCccEEEEhh
Confidence 7889999999864 4 44445567899999988876433222233333333 3443211 222222 2679999752
Q ss_pred ----CCCch--HHHHHHhcccCcEEEEEe
Q psy2961 88 ----VGGNS--ATNLLRTLVSKGVMVTYG 110 (202)
Q Consensus 88 ----~g~~~--~~~~~~~l~~~G~~v~~g 110 (202)
+..+. ...+.++++|+|.++...
T Consensus 133 VlEHv~dp~~~~~~c~~lvkP~G~lf~ST 161 (243)
T COG2227 133 VLEHVPDPESFLRACAKLVKPGGILFLST 161 (243)
T ss_pred HHHccCCHHHHHHHHHHHcCCCcEEEEec
Confidence 23333 233778999999987743
No 449
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.58 E-value=0.011 Score=48.38 Aligned_cols=80 Identities=16% Similarity=0.240 Sum_probs=54.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc-----------------cHHHHHHHHHhcCCceEeChhHHHh-
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD-----------------DIDKLKSYLKSLGADYVFTEEELRN- 71 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~-----------------~~~~~~~~~~~lg~~~v~~~~~~~~- 71 (202)
.+++|+|.|+| +.|+.++..++..|++|+.+-..+. -.....++++++|.+..++..-...
T Consensus 140 ~~~~V~IIG~G-paGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 218 (467)
T TIGR01318 140 TGKRVAVIGAG-PAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDI 218 (467)
T ss_pred CCCeEEEECCC-HHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCcc
Confidence 67899999999 9999999999999999777654431 0112356778888876665311001
Q ss_pred -HHHhhCCCCCeEEEecCCCch
Q psy2961 72 -ISRDASIPKPKLALNCVGGNS 92 (202)
Q Consensus 72 -~~~~~~~~~~d~vid~~g~~~ 92 (202)
+.... .++|.||.++|...
T Consensus 219 ~~~~~~--~~~D~vilAtGa~~ 238 (467)
T TIGR01318 219 SLDDLL--EDYDAVFLGVGTYR 238 (467)
T ss_pred CHHHHH--hcCCEEEEEeCCCC
Confidence 22222 36899999998753
No 450
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=96.58 E-value=0.024 Score=43.95 Aligned_cols=86 Identities=14% Similarity=0.174 Sum_probs=55.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHh-HHHhhCCCCCeEEEecC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKLALNCV 88 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~d~vid~~ 88 (202)
.|.+|.|.|.| .+|..+++.++.+|.+|++...... .+.....+...+ .++.+ + ...|++.-.+
T Consensus 141 ~gkTvGIiG~G-~IG~~va~~l~afgm~v~~~d~~~~-----~~~~~~~~~~~~---~~Ld~lL------~~sDiv~lh~ 205 (324)
T COG0111 141 AGKTVGIIGLG-RIGRAVAKRLKAFGMKVIGYDPYSP-----RERAGVDGVVGV---DSLDELL------AEADILTLHL 205 (324)
T ss_pred cCCEEEEECCC-HHHHHHHHHHHhCCCeEEEECCCCc-----hhhhccccceec---ccHHHHH------hhCCEEEEcC
Confidence 48899999999 9999999999999999999876332 122222222221 23333 3 2346766544
Q ss_pred C-CchHH-----HHHHhcccCcEEEEEe
Q psy2961 89 G-GNSAT-----NLLRTLVSKGVMVTYG 110 (202)
Q Consensus 89 g-~~~~~-----~~~~~l~~~G~~v~~g 110 (202)
. ++.+. ..+..|+++..++.++
T Consensus 206 PlT~eT~g~i~~~~~a~MK~gailIN~a 233 (324)
T COG0111 206 PLTPETRGLINAEELAKMKPGAILINAA 233 (324)
T ss_pred CCCcchhcccCHHHHhhCCCCeEEEECC
Confidence 3 22221 2577888888777765
No 451
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.57 E-value=0.024 Score=46.13 Aligned_cols=74 Identities=20% Similarity=0.285 Sum_probs=49.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc-cHHHHHHHHHhcCCceEeC-hhHHHhHHHhhCCCCCeEEEec
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD-DIDKLKSYLKSLGADYVFT-EEELRNISRDASIPKPKLALNC 87 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~-~~~~~~~~~~~lg~~~v~~-~~~~~~~~~~~~~~~~d~vid~ 87 (202)
.+.+|+|.|+| .+|+.+++.+...|++|+++..... ...+..+.+.++|...+.. ..+ .. ..++|+||.+
T Consensus 4 ~~k~v~iiG~g-~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~-----~~~~d~vv~~ 75 (450)
T PRK14106 4 KGKKVLVVGAG-VSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE--EF-----LEGVDLVVVS 75 (450)
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch--hH-----hhcCCEEEEC
Confidence 46899999999 5999999999999999888776542 2222234455566553332 111 11 1468999998
Q ss_pred CCCc
Q psy2961 88 VGGN 91 (202)
Q Consensus 88 ~g~~ 91 (202)
+|-.
T Consensus 76 ~g~~ 79 (450)
T PRK14106 76 PGVP 79 (450)
T ss_pred CCCC
Confidence 8853
No 452
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=96.57 E-value=0.028 Score=43.04 Aligned_cols=95 Identities=12% Similarity=0.070 Sum_probs=59.3
Q ss_pred CEEEEeCCCcHHHHH-HHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecCCC
Q psy2961 12 DVVIQNGANSACGQN-VIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVGG 90 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~-~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~g~ 90 (202)
-+|.|.|.| .+|.. +..+.+..+.++.++++.+.+. +.+..++++|..... .+++.+.+..+-.++|+||++++.
T Consensus 5 lrVAIIGtG-~IGt~hm~~l~~~~~velvAVvdid~es-~gla~A~~~Gi~~~~--~~ie~LL~~~~~~dIDiVf~AT~a 80 (302)
T PRK08300 5 LKVAIIGSG-NIGTDLMIKILRSEHLEPGAMVGIDPES-DGLARARRLGVATSA--EGIDGLLAMPEFDDIDIVFDATSA 80 (302)
T ss_pred CeEEEEcCc-HHHHHHHHHHhcCCCcEEEEEEeCChhh-HHHHHHHHcCCCccc--CCHHHHHhCcCCCCCCEEEECCCH
Confidence 478999966 88986 5556656678999998776431 134567778866533 333332221111579999999998
Q ss_pred chHHHHH-HhcccCcEEEEEe
Q psy2961 91 NSATNLL-RTLVSKGVMVTYG 110 (202)
Q Consensus 91 ~~~~~~~-~~l~~~G~~v~~g 110 (202)
..-.+.. .++..|-+++...
T Consensus 81 ~~H~e~a~~a~eaGk~VID~s 101 (302)
T PRK08300 81 GAHVRHAAKLREAGIRAIDLT 101 (302)
T ss_pred HHHHHHHHHHHHcCCeEEECC
Confidence 7665544 4445555555543
No 453
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=96.56 E-value=0.036 Score=41.11 Aligned_cols=37 Identities=22% Similarity=0.410 Sum_probs=32.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 46 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~ 46 (202)
.+.+++|+|+++++|.+++..+...|++++.+.++.+
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~ 40 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSE 40 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCc
Confidence 5689999999999999998888899999888888765
No 454
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.55 E-value=0.036 Score=43.28 Aligned_cols=37 Identities=24% Similarity=0.357 Sum_probs=32.0
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 46 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~ 46 (202)
-.|.+|.|.|.| .+|..+++.++.+|++|++..++.+
T Consensus 148 L~gktvgIiG~G-~IG~~vA~~l~~~G~~V~~~d~~~~ 184 (333)
T PRK13243 148 VYGKTIGIIGFG-RIGQAVARRAKGFGMRILYYSRTRK 184 (333)
T ss_pred CCCCEEEEECcC-HHHHHHHHHHHHCCCEEEEECCCCC
Confidence 368999999998 9999999999999999887766543
No 455
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.55 E-value=0.048 Score=39.08 Aligned_cols=103 Identities=17% Similarity=0.235 Sum_probs=56.9
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHC-CCcEEEEecCcccHHHHHHHHHhcCCceEeC-hhHHHh-HHHhhCCCC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHW-GLKTINIVRNRDDIDKLKSYLKSLGADYVFT-EEELRN-ISRDASIPK 80 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~-g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~-~~~~~~-~~~~~~~~~ 80 (202)
...+++++++||=.|+| .|..++.+++.. +.+++++-.+++......+.+++++...+.- ..+..+ +.... ..
T Consensus 34 ~~l~~~~~~~VLDiG~G--~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~--~~ 109 (196)
T PRK07402 34 SQLRLEPDSVLWDIGAG--TGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLA--PA 109 (196)
T ss_pred HhcCCCCCCEEEEeCCC--CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCC--CC
Confidence 34467789999888886 466777777654 5678888777653322233334455432211 122222 22211 12
Q ss_pred Ce-EEEecCCC--chHHHHHHhcccCcEEEEEe
Q psy2961 81 PK-LALNCVGG--NSATNLLRTLVSKGVMVTYG 110 (202)
Q Consensus 81 ~d-~vid~~g~--~~~~~~~~~l~~~G~~v~~g 110 (202)
+| ++++.... ..+..+.+.|+++|+++...
T Consensus 110 ~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 110 PDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred CCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 34 44543221 12234678999999998875
No 456
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=96.55 E-value=0.0092 Score=50.97 Aligned_cols=77 Identities=16% Similarity=0.053 Sum_probs=48.5
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHC-CCcEEEEecCcccHHHHHHHHHhc-CCceEe-ChhHHHh-HHHhhCCCCCe
Q psy2961 7 SLSPGDVVIQNGANSACGQNVIQIARHW-GLKTINIVRNRDDIDKLKSYLKSL-GADYVF-TEEELRN-ISRDASIPKPK 82 (202)
Q Consensus 7 ~~~~g~~VlI~g~~~~vG~~~i~la~~~-g~~vi~~~~~~~~~~~~~~~~~~l-g~~~v~-~~~~~~~-~~~~~~~~~~d 82 (202)
..+++.+|||+||+|-+|..+++.+... |.+|+++.+.... ....... +.+.+. |-.+... +.+.. .++|
T Consensus 311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~----~~~~~~~~~~~~~~gDl~d~~~~l~~~l--~~~D 384 (660)
T PRK08125 311 SAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDA----ISRFLGHPRFHFVEGDISIHSEWIEYHI--KKCD 384 (660)
T ss_pred hhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchh----hhhhcCCCceEEEeccccCcHHHHHHHh--cCCC
Confidence 3467889999999999999999877764 7899998876542 1211111 222222 2122222 33333 3689
Q ss_pred EEEecCC
Q psy2961 83 LALNCVG 89 (202)
Q Consensus 83 ~vid~~g 89 (202)
+||.+++
T Consensus 385 ~ViHlAa 391 (660)
T PRK08125 385 VVLPLVA 391 (660)
T ss_pred EEEECcc
Confidence 9999775
No 457
>PRK14982 acyl-ACP reductase; Provisional
Probab=96.55 E-value=0.24 Score=38.79 Aligned_cols=160 Identities=13% Similarity=0.077 Sum_probs=83.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHH-HCCC-cEEEEecCcccHHHHHHHH-HhcCCceEeChhHHHhHHHhhCCCCCeEEEe
Q psy2961 10 PGDVVIQNGANSACGQNVIQIAR-HWGL-KTINIVRNRDDIDKLKSYL-KSLGADYVFTEEELRNISRDASIPKPKLALN 86 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~-~~g~-~vi~~~~~~~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid 86 (202)
.+.+|+|+||+|.+|..+++.+. ..|. +++.+.++.+ +...+ .+++...+ .++.+ .. .+.|+|+.
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~----rl~~La~el~~~~i---~~l~~---~l--~~aDiVv~ 221 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQE----RLQELQAELGGGKI---LSLEE---AL--PEADIVVW 221 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHH----HHHHHHHHhccccH---HhHHH---HH--ccCCEEEE
Confidence 56899999999899999887775 4566 4455444433 33333 33432111 12222 22 46899999
Q ss_pred cCCCchHH-HHHHhcccCcEEEEEeccCCCCcCCCcccccccCeeEEE-------Eech-hH---hhhcccHHHHHHHHH
Q psy2961 87 CVGGNSAT-NLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKDITLRG-------HWMT-RW---QKENKESAERKSMMN 154 (202)
Q Consensus 87 ~~g~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g-------~~~~-~~---~~~~~~~~~~~~~~~ 154 (202)
+++.+... ---..+++.-.++.++.+..-.... -..++.++- .... .. ......+.....++.
T Consensus 222 ~ts~~~~~~I~~~~l~~~~~viDiAvPRDVd~~v-----~~~~V~v~~gG~V~~p~~vd~~l~~~v~~~~~~r~~~Ac~A 296 (340)
T PRK14982 222 VASMPKGVEIDPETLKKPCLMIDGGYPKNLDTKV-----QGPGIHVLKGGIVEHSLDIDWKIMEIAEMDNPQRQMFACFA 296 (340)
T ss_pred CCcCCcCCcCCHHHhCCCeEEEEecCCCCCCccc-----CCCCEEEEeCCccccCCCcCccHHHHHhccchhhHHHHHHH
Confidence 99875542 2224557777777877443221111 123333322 1111 00 011111112233344
Q ss_pred HHHHHHHcCCCCCC-ccee-echhhHHHHHHHHh
Q psy2961 155 ELTEMMRTGKLAAP-AHKF-VTLKNFQEALMNTM 186 (202)
Q Consensus 155 ~~~~~~~~g~~~~~-~~~~-~~~~~~~~a~~~~~ 186 (202)
+.+=+--+|..... .-+. .+++++++-.+...
T Consensus 297 EtiiL~leg~~~~fS~Gr~~i~~~~v~~i~~~a~ 330 (340)
T PRK14982 297 EAMLLEFEGCHTNFSWGRNQITLEKMEFIGEASV 330 (340)
T ss_pred HHHHHHhcCCccCCCcCccccCHHHHHHHHHHHH
Confidence 44444456666653 3344 78889888877765
No 458
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.54 E-value=0.14 Score=37.78 Aligned_cols=34 Identities=12% Similarity=0.150 Sum_probs=29.3
Q ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCc
Q psy2961 11 GDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 45 (202)
Q Consensus 11 g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~ 45 (202)
..+|+|.|.| ++|..++..+...|..-+.+++.+
T Consensus 11 ~~~VlVvG~G-GvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 11 NAHVAVVGLG-GVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred CCCEEEECCC-HHHHHHHHHHHHcCCCEEEEECCC
Confidence 4689999999 999999999999999878777654
No 459
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=96.53 E-value=0.011 Score=46.93 Aligned_cols=75 Identities=11% Similarity=0.053 Sum_probs=47.7
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-ChhHHHhHHHhhCCCCCeEEEec
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRNISRDASIPKPKLALNC 87 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~d~vid~ 87 (202)
..+++|||+|++|-+|..++..+...|.+|+++.+.... .... ..++...+. |-.+...+.... .++|+||.+
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~---~~~~-~~~~~~~~~~Dl~d~~~~~~~~--~~~D~Vih~ 92 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNE---HMSE-DMFCHEFHLVDLRVMENCLKVT--KGVDHVFNL 92 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccc---cccc-ccccceEEECCCCCHHHHHHHH--hCCCEEEEc
Confidence 467899999999999999999999999999988865431 0110 011222222 222222233322 368999998
Q ss_pred CC
Q psy2961 88 VG 89 (202)
Q Consensus 88 ~g 89 (202)
++
T Consensus 93 Aa 94 (370)
T PLN02695 93 AA 94 (370)
T ss_pred cc
Confidence 85
No 460
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=96.53 E-value=0.0081 Score=44.37 Aligned_cols=105 Identities=17% Similarity=0.196 Sum_probs=57.1
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCC--CcEEEEecCcccHHHHHHHHHhcCCceEe-ChhHHHhHHHhhCCCCC
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWG--LKTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRNISRDASIPKP 81 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g--~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~ 81 (202)
....++|++||=.|+| .|..+..+++..+ .+|+++.-+++-++...+.++..+...|. -..|.+++. .....+
T Consensus 42 ~~~~~~g~~vLDv~~G--tG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp--~~d~sf 117 (233)
T PF01209_consen 42 LLGLRPGDRVLDVACG--TGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLP--FPDNSF 117 (233)
T ss_dssp HHT--S--EEEEET-T--TSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB----S-TT-E
T ss_pred ccCCCCCCEEEEeCCC--hHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhc--CCCCce
Confidence 3467889999888886 5788889998876 47788777776433333444444433221 011111110 123579
Q ss_pred eEEEecCCCch-------HHHHHHhcccCcEEEEEeccC
Q psy2961 82 KLALNCVGGNS-------ATNLLRTLVSKGVMVTYGGMS 113 (202)
Q Consensus 82 d~vid~~g~~~-------~~~~~~~l~~~G~~v~~g~~~ 113 (202)
|+|..+.|-.. +.+..+.|+|||+++.+....
T Consensus 118 D~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~ 156 (233)
T PF01209_consen 118 DAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSK 156 (233)
T ss_dssp EEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred eEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccC
Confidence 99998776322 334788999999998876433
No 461
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.53 E-value=0.064 Score=40.80 Aligned_cols=76 Identities=11% Similarity=0.024 Sum_probs=48.8
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-ChhHHHhHHHhhCCCCCeEEEecCCC
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-TEEELRNISRDASIPKPKLALNCVGG 90 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~d~vid~~g~ 90 (202)
.+|||+|+.|-+|.-++..+...|.+|+++..-.... .+.+...-...+. |-.|-..+.+.+....+|.||.+++.
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~---~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~ 77 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGH---KIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAAS 77 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCC---HHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECccc
Confidence 3799999999999998888888999998887655542 2333222123222 21221114444444689999998874
No 462
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.52 E-value=0.03 Score=37.91 Aligned_cols=76 Identities=8% Similarity=0.044 Sum_probs=57.0
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCV 88 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~ 88 (202)
-.|.+|+|+|.+..+|.-++.++...|+.|+.+.+...+ +. +.. ...|+|+-++
T Consensus 26 ~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~---------------------l~---~~v--~~ADIVvsAt 79 (140)
T cd05212 26 LDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQ---------------------LQ---SKV--HDADVVVVGS 79 (140)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcC---------------------HH---HHH--hhCCEEEEec
Confidence 478999999999999999999999999987776533211 11 111 5679999999
Q ss_pred CCchHHHHHHhcccCcEEEEEec
Q psy2961 89 GGNSATNLLRTLVSKGVMVTYGG 111 (202)
Q Consensus 89 g~~~~~~~~~~l~~~G~~v~~g~ 111 (202)
|.+... --+++++|..++.+|.
T Consensus 80 g~~~~i-~~~~ikpGa~Vidvg~ 101 (140)
T cd05212 80 PKPEKV-PTEWIKPGATVINCSP 101 (140)
T ss_pred CCCCcc-CHHHcCCCCEEEEcCC
Confidence 988542 3568999999998873
No 463
>PRK07578 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.055 Score=38.68 Aligned_cols=63 Identities=17% Similarity=0.272 Sum_probs=40.4
Q ss_pred EEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHh-HHHhhCCCCCeEEEecCCC
Q psy2961 13 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRN-ISRDASIPKPKLALNCVGG 90 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~d~vid~~g~ 90 (202)
+++|.|+++++|..++..+... .+|+.+.++.+. +-++ +-+.++... +.+. +++|++|.++|.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~----------~~~D-~~~~~~~~~~~~~~---~~id~lv~~ag~ 65 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSGD----------VQVD-ITDPASIRALFEKV---GKVDAVVSAAGK 65 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCc----------eEec-CCChHHHHHHHHhc---CCCCEEEECCCC
Confidence 6899999999999988776666 888887765420 0011 112333333 3322 468999988873
No 464
>PLN02650 dihydroflavonol-4-reductase
Probab=96.51 E-value=0.016 Score=45.51 Aligned_cols=37 Identities=19% Similarity=0.202 Sum_probs=32.4
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 46 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~ 46 (202)
...+|||+|++|.+|..++..+...|.+|++++++.+
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~ 40 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPA 40 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 3468999999999999999999889999998887665
No 465
>PRK06924 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.032 Score=41.40 Aligned_cols=34 Identities=24% Similarity=0.334 Sum_probs=30.5
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCc
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 45 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~ 45 (202)
++++|+|++|++|..+++.+...|++|+.+.+++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~ 35 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTE 35 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCc
Confidence 4799999999999999998888999999888766
No 466
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=96.51 E-value=0.049 Score=40.70 Aligned_cols=89 Identities=20% Similarity=0.272 Sum_probs=53.7
Q ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCc-EEEEecCcccHHHHHHHHHh----cCCceEeChhHHHhHHHhhCCCCCe
Q psy2961 8 LSPGDVVIQNGANSACGQNVIQIARHWGLK-TINIVRNRDDIDKLKSYLKS----LGADYVFTEEELRNISRDASIPKPK 82 (202)
Q Consensus 8 ~~~g~~VlI~g~~~~vG~~~i~la~~~g~~-vi~~~~~~~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~d 82 (202)
+.++++||-.|+|+ |..++.+++ .|+. ++++..++. ..+.+++ .+....+. +. .+...+|
T Consensus 117 ~~~~~~VLDiGcGs--G~l~i~~~~-~g~~~v~giDis~~----~l~~A~~n~~~~~~~~~~~------~~--~~~~~fD 181 (250)
T PRK00517 117 VLPGKTVLDVGCGS--GILAIAAAK-LGAKKVLAVDIDPQ----AVEAARENAELNGVELNVY------LP--QGDLKAD 181 (250)
T ss_pred cCCCCEEEEeCCcH--HHHHHHHHH-cCCCeEEEEECCHH----HHHHHHHHHHHcCCCceEE------Ec--cCCCCcC
Confidence 46889999999984 777776554 5765 666665554 3344332 23211010 00 0012589
Q ss_pred EEEecCCCchH----HHHHHhcccCcEEEEEec
Q psy2961 83 LALNCVGGNSA----TNLLRTLVSKGVMVTYGG 111 (202)
Q Consensus 83 ~vid~~g~~~~----~~~~~~l~~~G~~v~~g~ 111 (202)
+|+........ ..+.+.|+++|.++..+.
T Consensus 182 ~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi 214 (250)
T PRK00517 182 VIVANILANPLLELAPDLARLLKPGGRLILSGI 214 (250)
T ss_pred EEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 99876654432 236788999999998763
No 467
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=96.51 E-value=0.026 Score=54.76 Aligned_cols=38 Identities=18% Similarity=0.254 Sum_probs=30.2
Q ss_pred CCCCCCEEEEeCCCcHHHHHHH-HHHHHCCCcEEEEecC
Q psy2961 7 SLSPGDVVIQNGANSACGQNVI-QIARHWGLKTINIVRN 44 (202)
Q Consensus 7 ~~~~g~~VlI~g~~~~vG~~~i-~la~~~g~~vi~~~~~ 44 (202)
.+.+|+++||+|+++|+|..++ .|++..|++++.+.++
T Consensus 1993 ~l~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813 1993 ALNSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 3567899999999999998765 4555668998887766
No 468
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.50 E-value=0.035 Score=45.04 Aligned_cols=45 Identities=20% Similarity=0.240 Sum_probs=33.0
Q ss_pred EEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCC
Q psy2961 13 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGA 60 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~ 60 (202)
+|.|.|+.|.+|.+++..++..|.+|++..++++. ..+.+.++|.
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~---~~~~a~~~gv 46 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKK---GKEVAKELGV 46 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHH---HHHHHHHcCC
Confidence 68899976699999999999999988877766542 1244445554
No 469
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=96.50 E-value=0.0085 Score=47.00 Aligned_cols=78 Identities=8% Similarity=0.072 Sum_probs=45.4
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhc--CC--ceEe-ChhHHHhHHHhhCCCCCeEEEe
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSL--GA--DYVF-TEEELRNISRDASIPKPKLALN 86 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~l--g~--~~v~-~~~~~~~~~~~~~~~~~d~vid 86 (202)
.+|||+|++|.+|..+++.+...|.+++++.++..... ....+..+ +. ..+. |-.+...+.+...+.++|+||+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAG-NLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCcccc-chhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 37999999999999999999999988766655432100 11111111 11 1111 2222212333333346899999
Q ss_pred cCCC
Q psy2961 87 CVGG 90 (202)
Q Consensus 87 ~~g~ 90 (202)
+++.
T Consensus 81 ~A~~ 84 (355)
T PRK10217 81 LAAE 84 (355)
T ss_pred CCcc
Confidence 9864
No 470
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=96.49 E-value=0.019 Score=43.71 Aligned_cols=60 Identities=20% Similarity=0.369 Sum_probs=48.4
Q ss_pred cccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeC
Q psy2961 4 DYNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFT 65 (202)
Q Consensus 4 ~~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~ 65 (202)
+.+.++||.+| |-+.+|.+|...+.+|+.+|++++.+.... ...|+++.++.+|++.+..
T Consensus 55 ~~G~l~pG~tI-VE~TSGNTGI~LA~vaa~~Gy~~iivmP~~-~S~er~~~l~a~GAevi~t 114 (300)
T COG0031 55 KRGLLKPGGTI-VEATSGNTGIALAMVAAAKGYRLIIVMPET-MSQERRKLLRALGAEVILT 114 (300)
T ss_pred HcCCCCCCCEE-EEcCCChHHHHHHHHHHHcCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEc
Confidence 45668999965 668888999999999999999988877543 3467889999999887763
No 471
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.48 E-value=0.14 Score=37.73 Aligned_cols=103 Identities=13% Similarity=0.125 Sum_probs=61.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccH----------------HHHH----HHHHhcCCc-eEeChhH
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDI----------------DKLK----SYLKSLGAD-YVFTEEE 68 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~----------------~~~~----~~~~~lg~~-~v~~~~~ 68 (202)
..++|+|.|.| |+|.+++..+...|...+.+.+-++-. ..+. +.++...+. .|....+
T Consensus 29 ~~~~V~VvGiG-GVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~ 107 (263)
T COG1179 29 KQAHVCVVGIG-GVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND 107 (263)
T ss_pred hhCcEEEEecC-chhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence 35789999999 899999999999999877776544300 0001 111111111 1111122
Q ss_pred H--Hh-HHHhhCCCCCeEEEecCCCchHHH-HHH-hcccCcEEEEEeccCC
Q psy2961 69 L--RN-ISRDASIPKPKLALNCVGGNSATN-LLR-TLVSKGVMVTYGGMSR 114 (202)
Q Consensus 69 ~--~~-~~~~~~~~~~d~vid~~g~~~~~~-~~~-~l~~~G~~v~~g~~~~ 114 (202)
+ ++ +.+.+. .++|+|+||.-.-.... ++. |.+.+=.++..++..+
T Consensus 108 f~t~en~~~~~~-~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~ 157 (263)
T COG1179 108 FITEENLEDLLS-KGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG 157 (263)
T ss_pred hhCHhHHHHHhc-CCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence 1 12 444444 48999999998776654 444 5555566777665544
No 472
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=96.48 E-value=0.0087 Score=45.39 Aligned_cols=60 Identities=18% Similarity=0.241 Sum_probs=41.4
Q ss_pred EEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecCCC
Q psy2961 13 VVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVGG 90 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~g~ 90 (202)
+|||+|++|.+|..+++.+...|.+|+++.++.- + +.+.+++.+ ...+..+|+||++++.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~~--------------d-~~~~~~~~~---~~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQL--------------D-LTDPEALER---LLRAIRPDAVVNTAAY 60 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCccc--------------C-CCCHHHHHH---HHHhCCCCEEEECCcc
Confidence 4899999999999999999989999888775411 1 112233333 2222457999998864
No 473
>PRK06849 hypothetical protein; Provisional
Probab=96.48 E-value=0.031 Score=44.55 Aligned_cols=79 Identities=9% Similarity=0.091 Sum_probs=51.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEe-----ChhHHHh-HHHhhCCCCCeE
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVF-----TEEELRN-ISRDASIPKPKL 83 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~-----~~~~~~~-~~~~~~~~~~d~ 83 (202)
...+|||+|++.+.|+.+++.++..|.+|+++...+.........+.. -..+ +..++.+ +.+.....++|+
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~---~~~~p~p~~d~~~~~~~L~~i~~~~~id~ 79 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVDG---FYTIPSPRWDPDAYIQALLSIVQRENIDL 79 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhh---eEEeCCCCCCHHHHHHHHHHHHHHcCCCE
Confidence 457999999998899999999999999999987765421111111111 1122 2233445 555555567999
Q ss_pred EEecCCCc
Q psy2961 84 ALNCVGGN 91 (202)
Q Consensus 84 vid~~g~~ 91 (202)
+|-+....
T Consensus 80 vIP~~e~~ 87 (389)
T PRK06849 80 LIPTCEEV 87 (389)
T ss_pred EEECChHH
Confidence 99777643
No 474
>PLN00198 anthocyanidin reductase; Provisional
Probab=96.46 E-value=0.024 Score=44.22 Aligned_cols=37 Identities=14% Similarity=0.130 Sum_probs=32.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD 46 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~ 46 (202)
.+.+|||+|++|.+|..+++.+...|++|+++++..+
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~ 44 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPE 44 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 4789999999999999999999989999988876654
No 475
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.46 E-value=0.015 Score=42.75 Aligned_cols=71 Identities=17% Similarity=0.196 Sum_probs=46.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceE-eChhH-HHhHHHhhCCCCCeEEEec
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYV-FTEEE-LRNISRDASIPKPKLALNC 87 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v-~~~~~-~~~~~~~~~~~~~d~vid~ 87 (202)
.+.+++|+|+++++|..+++.+...|++|+.+.++... . . .-....+ .|-.+ +..+.+.. +++|++|.+
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~-~-~~~~~~~~~D~~~~~~~~~~~~--~~id~lv~~ 74 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKP-----D-L-SGNFHFLQLDLSDDLEPLFDWV--PSVDILCNT 74 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccc-----c-c-CCcEEEEECChHHHHHHHHHhh--CCCCEEEEC
Confidence 46799999999999999999888889998888766431 1 1 0011111 12222 23333322 478999998
Q ss_pred CC
Q psy2961 88 VG 89 (202)
Q Consensus 88 ~g 89 (202)
.|
T Consensus 75 ag 76 (235)
T PRK06550 75 AG 76 (235)
T ss_pred CC
Confidence 87
No 476
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=96.45 E-value=0.039 Score=39.58 Aligned_cols=99 Identities=9% Similarity=-0.006 Sum_probs=54.7
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEE
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLAL 85 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vi 85 (202)
....++.+||-.|+| .|..+..+++ .|.+|+++.-+++..+...+.+...+........+.... .. ...+|+|+
T Consensus 26 ~~~~~~~~vLDiGcG--~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~--~~-~~~fD~I~ 99 (195)
T TIGR00477 26 VKTVAPCKTLDLGCG--QGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLPLRTDAYDINAA--AL-NEDYDFIF 99 (195)
T ss_pred hccCCCCcEEEeCCC--CCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCCceeEeccchhc--cc-cCCCCEEE
Confidence 344556789999986 5778888877 588888887776532211222223333211111111110 01 24689998
Q ss_pred ecCCC-----c----hHHHHHHhcccCcEEEEEe
Q psy2961 86 NCVGG-----N----SATNLLRTLVSKGVMVTYG 110 (202)
Q Consensus 86 d~~g~-----~----~~~~~~~~l~~~G~~v~~g 110 (202)
.+..- + .+..+.+.|+|||.++.+.
T Consensus 100 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~ 133 (195)
T TIGR00477 100 STVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVA 133 (195)
T ss_pred EecccccCCHHHHHHHHHHHHHHhCCCcEEEEEE
Confidence 65321 1 1223567899999966554
No 477
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.45 E-value=0.032 Score=44.51 Aligned_cols=75 Identities=21% Similarity=0.283 Sum_probs=53.3
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 89 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~g 89 (202)
.+.+|||.|+| -+|..+++-+...|.+.+.++.+.-. ...+.++++|+.. +..++..+ .. ..+|+||-++|
T Consensus 177 ~~~~vlvIGAG-em~~lva~~L~~~g~~~i~IaNRT~e--rA~~La~~~~~~~-~~l~el~~---~l--~~~DvVissTs 247 (414)
T COG0373 177 KDKKVLVIGAG-EMGELVAKHLAEKGVKKITIANRTLE--RAEELAKKLGAEA-VALEELLE---AL--AEADVVISSTS 247 (414)
T ss_pred ccCeEEEEccc-HHHHHHHHHHHhCCCCEEEEEcCCHH--HHHHHHHHhCCee-ecHHHHHH---hh--hhCCEEEEecC
Confidence 57889999999 89999999999999877766655431 2445667888543 33344333 11 46799999999
Q ss_pred CchH
Q psy2961 90 GNSA 93 (202)
Q Consensus 90 ~~~~ 93 (202)
.+..
T Consensus 248 a~~~ 251 (414)
T COG0373 248 APHP 251 (414)
T ss_pred CCcc
Confidence 8764
No 478
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.44 E-value=0.045 Score=39.49 Aligned_cols=80 Identities=19% Similarity=0.192 Sum_probs=50.2
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcCCceEeChhHHHhHHHhhCCCCCeEEEec
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYVFTEEELRNISRDASIPKPKLALNC 87 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~ 87 (202)
-.|.+|+|.|.| .+|..+++.+...|++|++...+++ +.+.+ ..+|+.. ++.+++. ...+|+++-|
T Consensus 26 l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~----~~~~~~~~~g~~~-v~~~~l~-------~~~~Dv~vp~ 92 (200)
T cd01075 26 LEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEE----AVARAAELFGATV-VAPEEIY-------SVDADVFAPC 92 (200)
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHH----HHHHHHHHcCCEE-Ecchhhc-------cccCCEEEec
Confidence 367899999998 8999999999999999886554433 34444 3446543 3332211 1357888866
Q ss_pred CCCchH-HHHHHhcc
Q psy2961 88 VGGNSA-TNLLRTLV 101 (202)
Q Consensus 88 ~g~~~~-~~~~~~l~ 101 (202)
..+... ...++.|+
T Consensus 93 A~~~~I~~~~~~~l~ 107 (200)
T cd01075 93 ALGGVINDDTIPQLK 107 (200)
T ss_pred ccccccCHHHHHHcC
Confidence 544332 33455554
No 479
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=96.43 E-value=0.017 Score=44.40 Aligned_cols=33 Identities=24% Similarity=0.427 Sum_probs=28.9
Q ss_pred EEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc
Q psy2961 14 VIQNGANSACGQNVIQIARHWGLKTINIVRNRD 46 (202)
Q Consensus 14 VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~ 46 (202)
|||+||+|.+|..+++.+...|.+++.++++.+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~ 34 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLK 34 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCC
Confidence 799999999999999988888998888877654
No 480
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=96.41 E-value=0.037 Score=41.23 Aligned_cols=101 Identities=13% Similarity=0.082 Sum_probs=60.2
Q ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCcEEEEecCcccHHHHHHHHHhcCCceEeC--hhHHHh-HHHhhC---
Q psy2961 6 NSLSPGDVVIQNGANSACGQNVIQIARHW--GLKTINIVRNRDDIDKLKSYLKSLGADYVFT--EEELRN-ISRDAS--- 77 (202)
Q Consensus 6 ~~~~~g~~VlI~g~~~~vG~~~i~la~~~--g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~--~~~~~~-~~~~~~--- 77 (202)
.+....++||-.|.+ +|..++.+|+.+ +.+++++-..++.....++.++..|...-+. ..+..+ +.+...
T Consensus 75 ~~~~~ak~iLEiGT~--~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~a~e~L~~l~~~~~ 152 (247)
T PLN02589 75 LKLINAKNTMEIGVY--TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDQMIEDGK 152 (247)
T ss_pred HHHhCCCEEEEEeCh--hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeccHHHHHHHHHhccc
Confidence 344556788888875 788999998876 4577777766653333344455566432222 123333 444322
Q ss_pred -CCCCeEEEe-cCCCch---HHHHHHhcccCcEEEE
Q psy2961 78 -IPKPKLALN-CVGGNS---ATNLLRTLVSKGVMVT 108 (202)
Q Consensus 78 -~~~~d~vid-~~g~~~---~~~~~~~l~~~G~~v~ 108 (202)
...||+||- +--..+ +..++++|++||.++.
T Consensus 153 ~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~ 188 (247)
T PLN02589 153 YHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY 188 (247)
T ss_pred cCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence 247999754 432222 2336789999998775
No 481
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.41 E-value=0.025 Score=41.24 Aligned_cols=95 Identities=9% Similarity=0.021 Sum_probs=58.0
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcCCceEe--------------C--hhHHHh
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYVF--------------T--EEELRN 71 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~v~--------------~--~~~~~~ 71 (202)
.++.+||+.|+| .|.-++-+|. .|.+|+++--++.. .+.+ ++.+..... + -.|+.+
T Consensus 33 ~~~~rvLd~GCG--~G~da~~LA~-~G~~V~gvD~S~~A----i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 105 (213)
T TIGR03840 33 PAGARVFVPLCG--KSLDLAWLAE-QGHRVLGVELSEIA----VEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFA 105 (213)
T ss_pred CCCCeEEEeCCC--chhHHHHHHh-CCCeEEEEeCCHHH----HHHHHHHcCCCcceeccccceeeecCceEEEEccCCC
Confidence 577899999997 5888888875 79999999888763 4443 222221100 0 011111
Q ss_pred HHHhhCCCCCeEEEecCCC---------chHHHHHHhcccCcEEEEEec
Q psy2961 72 ISRDASIPKPKLALNCVGG---------NSATNLLRTLVSKGVMVTYGG 111 (202)
Q Consensus 72 ~~~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~ 111 (202)
.... ....+|.|+|+..- ..+..+.++|+|+|+++.++.
T Consensus 106 ~~~~-~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 106 LTAA-DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred CCcc-cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 0000 01458999997642 123347789999999777764
No 482
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.41 E-value=0.039 Score=43.15 Aligned_cols=35 Identities=20% Similarity=0.216 Sum_probs=29.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCc
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 45 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~ 45 (202)
.+.+|+|.|+| ++|..+++.+...|...+.+++.+
T Consensus 23 ~~~~VlIiG~G-glGs~va~~La~aGvg~i~lvD~D 57 (338)
T PRK12475 23 REKHVLIVGAG-ALGAANAEALVRAGIGKLTIADRD 57 (338)
T ss_pred cCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCC
Confidence 35689999998 899999999999999777777665
No 483
>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase. 1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.
Probab=96.39 E-value=0.089 Score=41.52 Aligned_cols=95 Identities=12% Similarity=0.301 Sum_probs=62.1
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCcEEEEecCcccHHHHHHHHHhcCCceEe--Chh---HHHh-H-----------
Q psy2961 12 DVVIQNGANSACGQNVIQIARHW--GLKTINIVRNRDDIDKLKSYLKSLGADYVF--TEE---ELRN-I----------- 72 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~--g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~--~~~---~~~~-~----------- 72 (202)
++|.|+|++|++|..+..+.+.. ..+|++.+...+ .+...++++++.+..+. +.. .+.. +
T Consensus 2 k~i~IlGsTGSIG~qtL~Vi~~~~~~f~v~~Laa~~n-~~~L~~q~~~f~p~~v~i~d~~~~~~l~~~l~~~~~~~~v~~ 80 (389)
T TIGR00243 2 KQIVILGSTGSIGKSTLDVVRHNPDHFQVVALSAGKN-VALMVEQILEFRPKFVAIDDEASLKDLKTMLQQQGSRTEVLV 80 (389)
T ss_pred ceEEEEecChHHHHHHHHHHHhCccccEEEEEEcCCC-HHHHHHHHHHcCCCEEEEcCHHHHHHHHHHhhcCCCCcEEEE
Confidence 47999999999999999998865 378888876654 34456777888887766 221 1111 1
Q ss_pred -----HHhhCCCCCeEEEecCCCchHHH-HHHhcccCcEEE
Q psy2961 73 -----SRDASIPKPKLALNCVGGNSATN-LLRTLVSKGVMV 107 (202)
Q Consensus 73 -----~~~~~~~~~d~vid~~g~~~~~~-~~~~l~~~G~~v 107 (202)
.+......+|+|+.+..|-.... .+..++.|-++.
T Consensus 81 G~~~l~~l~~~~~~D~vv~AivG~aGL~pt~~Ai~~gk~ia 121 (389)
T TIGR00243 81 GEEGICEMAALEDVDQVMNAIVGAAGLLPTLAAIRAGKTIA 121 (389)
T ss_pred CHHHHHHHHcCCCCCEEEEhhhcHhhHHHHHHHHHCCCcEE
Confidence 11222246899999886655443 566665554443
No 484
>KOG1252|consensus
Probab=96.39 E-value=0.018 Score=44.19 Aligned_cols=60 Identities=20% Similarity=0.340 Sum_probs=51.0
Q ss_pred ccCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeC
Q psy2961 5 YNSLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFT 65 (202)
Q Consensus 5 ~~~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~ 65 (202)
.+.+.||.++||-..+|.+|...+.+++..|+++|.+.... -..||+..++++|++-|..
T Consensus 97 ~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~-ms~Ek~~~l~a~Gaeii~t 156 (362)
T KOG1252|consen 97 KGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEK-MSKEKRILLRALGAEIILT 156 (362)
T ss_pred cCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechh-hhHHHHHHHHHcCCEEEec
Confidence 45689999999999999999999999999999988887433 3467889999999987763
No 485
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.38 E-value=0.021 Score=48.68 Aligned_cols=79 Identities=16% Similarity=0.180 Sum_probs=54.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcc-----------------cHHHHHHHHHhcCCceEeChhH-HHh
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRD-----------------DIDKLKSYLKSLGADYVFTEEE-LRN 71 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~-----------------~~~~~~~~~~~lg~~~v~~~~~-~~~ 71 (202)
.+++|+|+|+| +.|+.++..++..|++|+++-..+. -...+.+.++++|.+..++..- ..-
T Consensus 309 ~~kkVaIIG~G-paGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAG-PAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcC-HHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999 9999999999999999877765542 0112356677888877665321 011
Q ss_pred -HHHhhCCCCCeEEEecCCCc
Q psy2961 72 -ISRDASIPKPKLALNCVGGN 91 (202)
Q Consensus 72 -~~~~~~~~~~d~vid~~g~~ 91 (202)
+.+.. .++|.||.++|..
T Consensus 388 ~~~~l~--~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFSDLT--SEYDAVFIGVGTY 406 (639)
T ss_pred CHHHHH--hcCCEEEEeCCCC
Confidence 22222 4689999999864
No 486
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.38 E-value=0.033 Score=42.25 Aligned_cols=75 Identities=13% Similarity=0.077 Sum_probs=57.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 89 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~g 89 (202)
.|.+|+|.|-+.-+|.-+++++...|+.|+.+.+.-. + +.+.+ ..+|++|.++|
T Consensus 158 ~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~---------------------~---l~~~~--~~ADIvi~avG 211 (285)
T PRK10792 158 YGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK---------------------N---LRHHV--RNADLLVVAVG 211 (285)
T ss_pred CCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC---------------------C---HHHHH--hhCCEEEEcCC
Confidence 5899999999988999999999999998766543221 1 11111 56799999999
Q ss_pred CchHHHHHHhcccCcEEEEEec
Q psy2961 90 GNSATNLLRTLVSKGVMVTYGG 111 (202)
Q Consensus 90 ~~~~~~~~~~l~~~G~~v~~g~ 111 (202)
.+.+.. -++++++..++.+|.
T Consensus 212 ~p~~v~-~~~vk~gavVIDvGi 232 (285)
T PRK10792 212 KPGFIP-GEWIKPGAIVIDVGI 232 (285)
T ss_pred Cccccc-HHHcCCCcEEEEccc
Confidence 888643 378899999999983
No 487
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.36 E-value=0.05 Score=41.94 Aligned_cols=90 Identities=18% Similarity=0.277 Sum_probs=56.1
Q ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC--cEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecCC
Q psy2961 12 DVVIQNGANSACGQNVIQIARHWGL--KTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 89 (202)
Q Consensus 12 ~~VlI~g~~~~vG~~~i~la~~~g~--~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~g 89 (202)
.+|.|+|+| .+|...++.++..|. +|++..++++ +.+.+++.|...... .+..+ .. .+.|+||.|+.
T Consensus 7 ~~I~IIG~G-~mG~sla~~l~~~g~~~~V~~~dr~~~----~~~~a~~~g~~~~~~-~~~~~---~~--~~aDvViiavp 75 (307)
T PRK07502 7 DRVALIGIG-LIGSSLARAIRRLGLAGEIVGADRSAE----TRARARELGLGDRVT-TSAAE---AV--KGADLVILCVP 75 (307)
T ss_pred cEEEEEeeC-HHHHHHHHHHHhcCCCcEEEEEECCHH----HHHHHHhCCCCceec-CCHHH---Hh--cCCCEEEECCC
Confidence 679999988 999999998888885 5665555543 456666676532111 11111 11 45789998887
Q ss_pred CchHHH----HHHhcccCcEEEEEecc
Q psy2961 90 GNSATN----LLRTLVSKGVMVTYGGM 112 (202)
Q Consensus 90 ~~~~~~----~~~~l~~~G~~v~~g~~ 112 (202)
...... +...++++..++.++..
T Consensus 76 ~~~~~~v~~~l~~~l~~~~iv~dvgs~ 102 (307)
T PRK07502 76 VGASGAVAAEIAPHLKPGAIVTDVGSV 102 (307)
T ss_pred HHHHHHHHHHHHhhCCCCCEEEeCccc
Confidence 654332 33456677766666643
No 488
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=96.35 E-value=0.0047 Score=46.87 Aligned_cols=67 Identities=15% Similarity=0.093 Sum_probs=44.0
Q ss_pred EEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecCCC
Q psy2961 14 VIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVGG 90 (202)
Q Consensus 14 VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~g~ 90 (202)
|||+|++|.+|..+++.+...|.+|+++.++++. .+.....+ +.+... ....+.. .++|+||.+++.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~~~---~~~~~~-~~~~~~~--~~~D~Vvh~a~~ 67 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPA----GANTKWEG---YKPWAP-LAESEAL--EGADAVINLAGE 67 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCC----CCccccee---eecccc-cchhhhc--CCCCEEEECCCC
Confidence 6899999999999999888899999999987763 11111111 111111 1122222 468999999974
No 489
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=96.33 E-value=0.051 Score=45.18 Aligned_cols=35 Identities=23% Similarity=0.249 Sum_probs=31.1
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCc
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 45 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~ 45 (202)
.|.+|.|+|.| .+|...++.++.+|++|++..+..
T Consensus 139 ~gktvgIiG~G-~IG~~vA~~l~~fG~~V~~~d~~~ 173 (526)
T PRK13581 139 YGKTLGIIGLG-RIGSEVAKRAKAFGMKVIAYDPYI 173 (526)
T ss_pred CCCEEEEECCC-HHHHHHHHHHHhCCCEEEEECCCC
Confidence 58899999999 899999999999999988877543
No 490
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=96.31 E-value=0.045 Score=39.83 Aligned_cols=35 Identities=20% Similarity=0.206 Sum_probs=29.5
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCc
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNR 45 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~ 45 (202)
...+|+|.|+| ++|..+++.+...|...+.+++.+
T Consensus 27 ~~~~V~ViG~G-glGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAG-GLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcC-HHHHHHHHHHHHcCCCeEEEEeCC
Confidence 35689999998 999999999999999877777665
No 491
>PRK14968 putative methyltransferase; Provisional
Probab=96.30 E-value=0.038 Score=39.06 Aligned_cols=38 Identities=26% Similarity=0.323 Sum_probs=29.4
Q ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCccc
Q psy2961 7 SLSPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDD 47 (202)
Q Consensus 7 ~~~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~ 47 (202)
...++++||..|+| .|..+..+++. +.+++++..+++.
T Consensus 20 ~~~~~~~vLd~G~G--~G~~~~~l~~~-~~~v~~~D~s~~~ 57 (188)
T PRK14968 20 VDKKGDRVLEVGTG--SGIVAIVAAKN-GKKVVGVDINPYA 57 (188)
T ss_pred hccCCCEEEEEccc--cCHHHHHHHhh-cceEEEEECCHHH
Confidence 34688899999986 47788888877 8888888777653
No 492
>PLN02256 arogenate dehydrogenase
Probab=96.29 E-value=0.088 Score=40.57 Aligned_cols=90 Identities=18% Similarity=0.197 Sum_probs=52.5
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecC
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCV 88 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~ 88 (202)
-.+.+|.|.|.| .+|...+..++..|.+++++.+++. .+.+.++|.... .+..++ .. ...|+||-|+
T Consensus 34 ~~~~kI~IIG~G-~mG~slA~~L~~~G~~V~~~d~~~~-----~~~a~~~gv~~~---~~~~e~---~~-~~aDvVilav 100 (304)
T PLN02256 34 SRKLKIGIVGFG-NFGQFLAKTFVKQGHTVLATSRSDY-----SDIAAELGVSFF---RDPDDF---CE-EHPDVVLLCT 100 (304)
T ss_pred CCCCEEEEEeeC-HHHHHHHHHHHhCCCEEEEEECccH-----HHHHHHcCCeee---CCHHHH---hh-CCCCEEEEec
Confidence 355689999987 8999988888888888887766542 244455665321 111111 00 2356777666
Q ss_pred CCchHHHHHH-----hcccCcEEEEEec
Q psy2961 89 GGNSATNLLR-----TLVSKGVMVTYGG 111 (202)
Q Consensus 89 g~~~~~~~~~-----~l~~~G~~v~~g~ 111 (202)
........+. .++++..++.++.
T Consensus 101 p~~~~~~vl~~l~~~~l~~~~iviDv~S 128 (304)
T PLN02256 101 SILSTEAVLRSLPLQRLKRSTLFVDVLS 128 (304)
T ss_pred CHHHHHHHHHhhhhhccCCCCEEEecCC
Confidence 6544333222 2345555556554
No 493
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.26 E-value=0.035 Score=45.57 Aligned_cols=74 Identities=18% Similarity=0.186 Sum_probs=49.4
Q ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccH-HHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEec
Q psy2961 9 SPGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDI-DKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNC 87 (202)
Q Consensus 9 ~~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~ 87 (202)
-.+.+|+|.|+| ++|+.++..++..|++|+++...+... ....+.+++.|......... . ...++|+||-+
T Consensus 14 ~~~~~v~viG~G-~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~----~---~~~~~D~Vv~s 85 (480)
T PRK01438 14 WQGLRVVVAGLG-VSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGP----T---LPEDTDLVVTS 85 (480)
T ss_pred cCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc----c---ccCCCCEEEEC
Confidence 357799999998 899999999999999987776554321 11235566777765543211 0 01357888887
Q ss_pred CCC
Q psy2961 88 VGG 90 (202)
Q Consensus 88 ~g~ 90 (202)
.|-
T Consensus 86 ~Gi 88 (480)
T PRK01438 86 PGW 88 (480)
T ss_pred CCc
Confidence 774
No 494
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=96.26 E-value=0.18 Score=36.64 Aligned_cols=96 Identities=10% Similarity=0.180 Sum_probs=63.8
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 89 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~g 89 (202)
.|..|+|.|+| .+|.-=+.+....|+++++++..-. ++-..+..+.+...+ . ..+.. +.. .++++||-+++
T Consensus 11 ~~k~VlvvGgG-~va~rKa~~ll~~ga~v~Vvs~~~~--~el~~~~~~~~i~~~-~-~~~~~--~~~--~~~~lviaAt~ 81 (210)
T COG1648 11 EGKKVLVVGGG-SVALRKARLLLKAGADVTVVSPEFE--PELKALIEEGKIKWI-E-REFDA--EDL--DDAFLVIAATD 81 (210)
T ss_pred CCCEEEEECCC-HHHHHHHHHHHhcCCEEEEEcCCcc--HHHHHHHHhcCcchh-h-cccCh--hhh--cCceEEEEeCC
Confidence 57899999999 8999999999999999888875542 222233333332211 1 11111 111 34899999999
Q ss_pred CchHHH-HHHhcccCcEEEEEeccCC
Q psy2961 90 GNSATN-LLRTLVSKGVMVTYGGMSR 114 (202)
Q Consensus 90 ~~~~~~-~~~~l~~~G~~v~~g~~~~ 114 (202)
.+...+ .....+..+.+|.+...+.
T Consensus 82 d~~ln~~i~~~a~~~~i~vNv~D~p~ 107 (210)
T COG1648 82 DEELNERIAKAARERRILVNVVDDPE 107 (210)
T ss_pred CHHHHHHHHHHHHHhCCceeccCCcc
Confidence 988876 6677778888888775544
No 495
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=96.26 E-value=0.013 Score=44.96 Aligned_cols=70 Identities=14% Similarity=0.254 Sum_probs=41.6
Q ss_pred EEEeCCCcHHHHHHHHHHHHCCC-cEEEEecCcccHHHHHHHHHhcCCceEeC---hhHHHh-HHHhhCCCCCeEEEecC
Q psy2961 14 VIQNGANSACGQNVIQIARHWGL-KTINIVRNRDDIDKLKSYLKSLGADYVFT---EEELRN-ISRDASIPKPKLALNCV 88 (202)
Q Consensus 14 VlI~g~~~~vG~~~i~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~v~~---~~~~~~-~~~~~~~~~~d~vid~~ 88 (202)
|||+|++|.+|..+++.+...|. .|+++.++... ..+.+++...+.+ ..+..+ +.+. ...++|+||.++
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~-----~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~D~vvh~A 74 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDG-----HKFLNLADLVIADYIDKEDFLDRLEKG-AFGKIEAIFHQG 74 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCc-----hhhhhhhheeeeccCcchhHHHHHHhh-ccCCCCEEEECc
Confidence 68999999999999999999998 56655444321 1222222222222 122222 2221 114799999988
Q ss_pred C
Q psy2961 89 G 89 (202)
Q Consensus 89 g 89 (202)
+
T Consensus 75 ~ 75 (314)
T TIGR02197 75 A 75 (314)
T ss_pred c
Confidence 6
No 496
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.25 E-value=0.041 Score=41.75 Aligned_cols=75 Identities=16% Similarity=0.133 Sum_probs=56.7
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecCC
Q psy2961 10 PGDVVIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVG 89 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~g 89 (202)
.|.+|+|.|.+..+|.-++.++...|+.|.... +.. .++.+ .+ ..+|+|+-++|
T Consensus 156 ~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~h-s~t--------------------~~l~~---~~--~~ADIvV~AvG 209 (285)
T PRK14191 156 KGKDVVIIGASNIVGKPLAMLMLNAGASVSVCH-ILT--------------------KDLSF---YT--QNADIVCVGVG 209 (285)
T ss_pred CCCEEEEECCCchhHHHHHHHHHHCCCEEEEEe-CCc--------------------HHHHH---HH--HhCCEEEEecC
Confidence 699999999999999999999999999876643 221 11111 11 45799999999
Q ss_pred CchHHHHHHhcccCcEEEEEec
Q psy2961 90 GNSATNLLRTLVSKGVMVTYGG 111 (202)
Q Consensus 90 ~~~~~~~~~~l~~~G~~v~~g~ 111 (202)
.+.+.. -+++++|..++.+|.
T Consensus 210 ~p~~i~-~~~vk~GavVIDvGi 230 (285)
T PRK14191 210 KPDLIK-ASMVKKGAVVVDIGI 230 (285)
T ss_pred CCCcCC-HHHcCCCcEEEEeec
Confidence 887643 457799999999984
No 497
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=96.24 E-value=0.09 Score=40.04 Aligned_cols=89 Identities=10% Similarity=0.131 Sum_probs=57.0
Q ss_pred EEEEeCCCcHHHHHH-HHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeChhHHHhHHHhhCCCCCeEEEecCCCc
Q psy2961 13 VVIQNGANSACGQNV-IQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFTEEELRNISRDASIPKPKLALNCVGGN 91 (202)
Q Consensus 13 ~VlI~g~~~~vG~~~-i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~d~vid~~g~~ 91 (202)
+|.|.|+| .+|... ..+.+..+.++.++++.+.+. +.++..+++|.....+ +.+.+. ...++|+|+++++..
T Consensus 3 rVAIIG~G-~IG~~h~~~ll~~~~~elvaV~d~d~es-~~la~A~~~Gi~~~~~--~~e~ll---~~~dIDaV~iaTp~~ 75 (285)
T TIGR03215 3 KVAIIGSG-NIGTDLMYKLLRSEHLEMVAMVGIDPES-DGLARARELGVKTSAE--GVDGLL---ANPDIDIVFDATSAK 75 (285)
T ss_pred EEEEEeCc-HHHHHHHHHHHhCCCcEEEEEEeCCccc-HHHHHHHHCCCCEEEC--CHHHHh---cCCCCCEEEECCCcH
Confidence 68899985 899854 566666678899888765431 1245677788776542 222211 125799999999987
Q ss_pred hHHHH-HHhcccCcEEEE
Q psy2961 92 SATNL-LRTLVSKGVMVT 108 (202)
Q Consensus 92 ~~~~~-~~~l~~~G~~v~ 108 (202)
.-... ..++..|-+++.
T Consensus 76 ~H~e~a~~al~aGk~VId 93 (285)
T TIGR03215 76 AHARHARLLAELGKIVID 93 (285)
T ss_pred HHHHHHHHHHHcCCEEEE
Confidence 65554 445555444444
No 498
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.23 E-value=0.12 Score=33.53 Aligned_cols=91 Identities=15% Similarity=0.231 Sum_probs=58.8
Q ss_pred EEEeCCCcHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHHHhcCCceEeC-hhHHHhHHHhhCCCCCeEEEecCCCch
Q psy2961 14 VIQNGANSACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYLKSLGADYVFT-EEELRNISRDASIPKPKLALNCVGGNS 92 (202)
Q Consensus 14 VlI~g~~~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~v~~-~~~~~~~~~~~~~~~~d~vid~~g~~~ 92 (202)
|+|+|.+ .+|..+++.++..+.+++.+...++ +.+.+++.|...+.. ..+...+++. +-..++.++-+++.+.
T Consensus 1 vvI~G~g-~~~~~i~~~L~~~~~~vvvid~d~~----~~~~~~~~~~~~i~gd~~~~~~l~~a-~i~~a~~vv~~~~~d~ 74 (116)
T PF02254_consen 1 VVIIGYG-RIGREIAEQLKEGGIDVVVIDRDPE----RVEELREEGVEVIYGDATDPEVLERA-GIEKADAVVILTDDDE 74 (116)
T ss_dssp EEEES-S-HHHHHHHHHHHHTTSEEEEEESSHH----HHHHHHHTTSEEEES-TTSHHHHHHT-TGGCESEEEEESSSHH
T ss_pred eEEEcCC-HHHHHHHHHHHhCCCEEEEEECCcH----HHHHHHhcccccccccchhhhHHhhc-CccccCEEEEccCCHH
Confidence 6788998 8999999999996667777776665 578888888665552 2222212222 2256788888887765
Q ss_pred HHH----HHHhcccCcEEEEEe
Q psy2961 93 ATN----LLRTLVSKGVMVTYG 110 (202)
Q Consensus 93 ~~~----~~~~l~~~G~~v~~g 110 (202)
... .++-+.+..+++...
T Consensus 75 ~n~~~~~~~r~~~~~~~ii~~~ 96 (116)
T PF02254_consen 75 ENLLIALLARELNPDIRIIARV 96 (116)
T ss_dssp HHHHHHHHHHHHTTTSEEEEEE
T ss_pred HHHHHHHHHHHHCCCCeEEEEE
Confidence 442 234455666776654
No 499
>PRK09620 hypothetical protein; Provisional
Probab=96.23 E-value=0.023 Score=41.90 Aligned_cols=81 Identities=11% Similarity=0.078 Sum_probs=52.3
Q ss_pred CCCEEEEeCCC----------------cHHHHHHHHHHHHCCCcEEEEecCcccHHHHHHHH-HhcCCceEeChhHHHh-
Q psy2961 10 PGDVVIQNGAN----------------SACGQNVIQIARHWGLKTINIVRNRDDIDKLKSYL-KSLGADYVFTEEELRN- 71 (202)
Q Consensus 10 ~g~~VlI~g~~----------------~~vG~~~i~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~v~~~~~~~~- 71 (202)
.|.+|||++|+ |-+|..+++.+...|++|+.+.+.... ..... .......+....+..+
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~---~~~~~~~~~~~~~V~s~~d~~~~ 78 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAE---KPNDINNQLELHPFEGIIDLQDK 78 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcC---CCcccCCceeEEEEecHHHHHHH
Confidence 47889999886 799999999999999999988754321 00101 0111122223345555
Q ss_pred HHHhhCCCCCeEEEecCCCchH
Q psy2961 72 ISRDASIPKPKLALNCVGGNSA 93 (202)
Q Consensus 72 ~~~~~~~~~~d~vid~~g~~~~ 93 (202)
+.+.....++|+||.++.-..+
T Consensus 79 l~~~~~~~~~D~VIH~AAvsD~ 100 (229)
T PRK09620 79 MKSIITHEKVDAVIMAAAGSDW 100 (229)
T ss_pred HHHHhcccCCCEEEECccccce
Confidence 6666554578999998876554
No 500
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.23 E-value=0.054 Score=41.76 Aligned_cols=106 Identities=6% Similarity=0.056 Sum_probs=64.0
Q ss_pred CCCEEEEeCCCcHHHHHHHHHHH-HCCCcEEEEecCcccHHHHHHHHHhc---CCceEeChhHHHhHHHhhCCCCCeEEE
Q psy2961 10 PGDVVIQNGANSACGQNVIQIAR-HWGLKTINIVRNRDDIDKLKSYLKSL---GADYVFTEEELRNISRDASIPKPKLAL 85 (202)
Q Consensus 10 ~g~~VlI~g~~~~vG~~~i~la~-~~g~~vi~~~~~~~~~~~~~~~~~~l---g~~~v~~~~~~~~~~~~~~~~~~d~vi 85 (202)
...+++|+|+| ..|.+.++.+. ..+.+.+.++++.... ...++.++ +.... ..+..+ .. .+.|+|+
T Consensus 124 ~~~~v~IiGaG-~qa~~~~~al~~~~~~~~v~v~~r~~~~--a~~~a~~~~~~~~~~~--~~~~~~---av--~~aDiVi 193 (304)
T PRK07340 124 PPGDLLLIGTG-VQARAHLEAFAAGLPVRRVWVRGRTAAS--AAAFCAHARALGPTAE--PLDGEA---IP--EAVDLVV 193 (304)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHhCCCCEEEEEcCCHHH--HHHHHHHHHhcCCeeE--ECCHHH---Hh--hcCCEEE
Confidence 45789999998 88988777765 4677666666554321 22333333 22222 122222 22 4789999
Q ss_pred ecCCCchH-HHHHHhcccCcEEEEEeccCCCCcCCCcccccccC
Q psy2961 86 NCVGGNSA-TNLLRTLVSKGVMVTYGGMSREPVQIPTSAFIFKD 128 (202)
Q Consensus 86 d~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 128 (202)
.|+.+... ... .++||-++..+|........++. .++.+.
T Consensus 194 taT~s~~Pl~~~--~~~~g~hi~~iGs~~p~~~El~~-~~~~~a 234 (304)
T PRK07340 194 TATTSRTPVYPE--AARAGRLVVAVGAFTPDMAELAP-RTVRGS 234 (304)
T ss_pred EccCCCCceeCc--cCCCCCEEEecCCCCCCcccCCH-HHHhhC
Confidence 98876542 223 47999999999976655445554 344443
Done!