BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2967
(101 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VHV5|ARL8_DROME ADP-ribosylation factor-like protein 8 OS=Drosophila melanogaster
GN=Gie PE=1 SV=1
Length = 186
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 75/113 (66%), Gaps = 29/113 (25%)
Query: 1 MELTLSG-QFSQDMIPTVGFNMRKITKGNVTIWPVPLSGQFSQDMIPTVGFNMRKITKGN 59
MELTL G QFS G T V SGQF++DMIPTVGFNMRKIT+GN
Sbjct: 21 MELTLVGLQFS----------------GKTTFVNVIASGQFAEDMIPTVGFNMRKITRGN 64
Query: 60 VTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRNELHALIEK 100
VTIKVWDIGGQPRFRS +YMVDAAD DKLEASRNELH+L++K
Sbjct: 65 VTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDK 117
>sp|Q6NZW8|AR8BA_DANRE ADP-ribosylation factor-like protein 8B-A OS=Danio rerio GN=arl8ba
PE=2 SV=1
Length = 186
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 74/113 (65%), Gaps = 29/113 (25%)
Query: 1 MELTLSG-QFSQDMIPTVGFNMRKITKGNVTIWPVPLSGQFSQDMIPTVGFNMRKITKGN 59
MELTL G Q+S G T V SGQFS+DMIPTVGFNMRK+TKGN
Sbjct: 21 MELTLVGLQYS----------------GKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGN 64
Query: 60 VTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRNELHALIEK 100
VTIK+WDIGGQPRFRS +YMVDAAD +K+EASRNELH L++K
Sbjct: 65 VTIKIWDIGGQPRFRSMWERYCRGVNAIVYMVDAADREKVEASRNELHNLLDK 117
>sp|Q66HA6|ARL8B_RAT ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus
GN=Arl8b PE=2 SV=1
Length = 186
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 74/113 (65%), Gaps = 29/113 (25%)
Query: 1 MELTLSG-QFSQDMIPTVGFNMRKITKGNVTIWPVPLSGQFSQDMIPTVGFNMRKITKGN 59
MELTL G Q+S G T V SGQFS+DMIPTVGFNMRK+TKGN
Sbjct: 21 MELTLVGLQYS----------------GKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGN 64
Query: 60 VTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRNELHALIEK 100
VTIK+WDIGGQPRFRS +YM+DAAD +K+EASRNELH L++K
Sbjct: 65 VTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDK 117
>sp|Q9CQW2|ARL8B_MOUSE ADP-ribosylation factor-like protein 8B OS=Mus musculus GN=Arl8b
PE=2 SV=1
Length = 186
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 74/113 (65%), Gaps = 29/113 (25%)
Query: 1 MELTLSG-QFSQDMIPTVGFNMRKITKGNVTIWPVPLSGQFSQDMIPTVGFNMRKITKGN 59
MELTL G Q+S G T V SGQFS+DMIPTVGFNMRK+TKGN
Sbjct: 21 MELTLVGLQYS----------------GKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGN 64
Query: 60 VTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRNELHALIEK 100
VTIK+WDIGGQPRFRS +YM+DAAD +K+EASRNELH L++K
Sbjct: 65 VTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDK 117
>sp|Q9NVJ2|ARL8B_HUMAN ADP-ribosylation factor-like protein 8B OS=Homo sapiens GN=ARL8B
PE=1 SV=1
Length = 186
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 74/113 (65%), Gaps = 29/113 (25%)
Query: 1 MELTLSG-QFSQDMIPTVGFNMRKITKGNVTIWPVPLSGQFSQDMIPTVGFNMRKITKGN 59
MELTL G Q+S G T V SGQFS+DMIPTVGFNMRK+TKGN
Sbjct: 21 MELTLVGLQYS----------------GKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGN 64
Query: 60 VTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRNELHALIEK 100
VTIK+WDIGGQPRFRS +YM+DAAD +K+EASRNELH L++K
Sbjct: 65 VTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDK 117
>sp|Q6P8C8|ARL8A_XENTR ADP-ribosylation factor-like protein 8A OS=Xenopus tropicalis
GN=arl8a PE=2 SV=1
Length = 186
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 74/113 (65%), Gaps = 29/113 (25%)
Query: 1 MELTLSG-QFSQDMIPTVGFNMRKITKGNVTIWPVPLSGQFSQDMIPTVGFNMRKITKGN 59
MELTL G Q+S G T V SGQF++DMIPTVGFNMRKITKGN
Sbjct: 21 MELTLVGLQYS----------------GKTTFVNVIASGQFNEDMIPTVGFNMRKITKGN 64
Query: 60 VTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRNELHALIEK 100
VTIK+WDIGGQPRFRS +YMVDAAD DK+EAS+NELH L++K
Sbjct: 65 VTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQDKIEASKNELHNLLDK 117
>sp|Q4R4S4|ARL8B_MACFA ADP-ribosylation factor-like protein 8B OS=Macaca fascicularis
GN=ARL8B PE=2 SV=1
Length = 186
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 74/113 (65%), Gaps = 29/113 (25%)
Query: 1 MELTLSG-QFSQDMIPTVGFNMRKITKGNVTIWPVPLSGQFSQDMIPTVGFNMRKITKGN 59
MELTL G Q+S G T V SGQFS+DMIPTVGFNMRK+TKGN
Sbjct: 21 MELTLVGLQYS----------------GKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGN 64
Query: 60 VTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRNELHALIEK 100
VTIK+WDIGGQPR+RS +YM+DAAD +K+EASRNELH L++K
Sbjct: 65 VTIKIWDIGGQPRYRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDK 117
>sp|Q8VEH3|ARL8A_MOUSE ADP-ribosylation factor-like protein 8A OS=Mus musculus GN=Arl8a
PE=2 SV=1
Length = 186
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 74/113 (65%), Gaps = 29/113 (25%)
Query: 1 MELTLSG-QFSQDMIPTVGFNMRKITKGNVTIWPVPLSGQFSQDMIPTVGFNMRKITKGN 59
MELTL G Q+S G T V SGQF++DMIPTVGFNMRKITKGN
Sbjct: 21 MELTLVGLQYS----------------GKTTFVNVIASGQFNEDMIPTVGFNMRKITKGN 64
Query: 60 VTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRNELHALIEK 100
VTIK+WDIGGQPRFRS +YMVDAAD +K+EAS+NELH L++K
Sbjct: 65 VTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDK 117
>sp|Q2KI07|ARL8B_BOVIN ADP-ribosylation factor-like protein 8B OS=Bos taurus GN=ARL8B PE=2
SV=1
Length = 186
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 74/113 (65%), Gaps = 29/113 (25%)
Query: 1 MELTLSG-QFSQDMIPTVGFNMRKITKGNVTIWPVPLSGQFSQDMIPTVGFNMRKITKGN 59
MELTL G Q+S G T V SGQFS+DMIPTVGFNMRK+TKGN
Sbjct: 21 MELTLVGLQYS----------------GKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGN 64
Query: 60 VTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRNELHALIEK 100
VTIK+WDIGGQPRF+S +YM+DAAD +K+EASRNELH L++K
Sbjct: 65 VTIKIWDIGGQPRFQSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDK 117
>sp|Q5ZKQ8|ARL8A_CHICK ADP-ribosylation factor-like protein 8A OS=Gallus gallus GN=ARL8A
PE=2 SV=1
Length = 186
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 74/113 (65%), Gaps = 29/113 (25%)
Query: 1 MELTLSG-QFSQDMIPTVGFNMRKITKGNVTIWPVPLSGQFSQDMIPTVGFNMRKITKGN 59
MELTL G Q+S G T V SGQF++DMIPTVGFNMRKITKGN
Sbjct: 21 MELTLVGLQYS----------------GKTTFVNVIASGQFNEDMIPTVGFNMRKITKGN 64
Query: 60 VTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRNELHALIEK 100
VTIK+WDIGGQPRFRS +YMVDAAD +K+EAS+NELH L++K
Sbjct: 65 VTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDK 117
>sp|Q96BM9|ARL8A_HUMAN ADP-ribosylation factor-like protein 8A OS=Homo sapiens GN=ARL8A
PE=1 SV=1
Length = 186
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 74/113 (65%), Gaps = 29/113 (25%)
Query: 1 MELTLSG-QFSQDMIPTVGFNMRKITKGNVTIWPVPLSGQFSQDMIPTVGFNMRKITKGN 59
MELTL G Q+S G T V SGQF++DMIPTVGFNMRKITKGN
Sbjct: 21 MELTLVGLQYS----------------GKTTFVNVIASGQFNEDMIPTVGFNMRKITKGN 64
Query: 60 VTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRNELHALIEK 100
VTIK+WDIGGQPRFRS +YMVDAAD +K+EAS+NELH L++K
Sbjct: 65 VTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDK 117
>sp|Q5R6E7|ARL8B_PONAB ADP-ribosylation factor-like protein 8B OS=Pongo abelii GN=ARL8B
PE=2 SV=1
Length = 186
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 73/113 (64%), Gaps = 29/113 (25%)
Query: 1 MELTLSG-QFSQDMIPTVGFNMRKITKGNVTIWPVPLSGQFSQDMIPTVGFNMRKITKGN 59
MELTL G Q+S G T V SGQFS+DMIPTVGFNMRK+TKGN
Sbjct: 21 MELTLVGLQYS----------------GKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGN 64
Query: 60 VTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRNELHALIEK 100
VTIK+WDIGGQPRFRS +YM+DAA +K+EASRNELH L++K
Sbjct: 65 VTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAAYREKIEASRNELHNLLDK 117
>sp|Q54R04|ARL8_DICDI ADP-ribosylation factor-like protein 8 OS=Dictyostelium discoideum
GN=arl8 PE=3 SV=1
Length = 185
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 57/86 (66%), Gaps = 12/86 (13%)
Query: 27 GNVTIWPVPLSGQFSQDMIPTVGFNMRKITKGNVTIKVWDIGGQPRFRS----------- 75
G T+ V +G F +D IPT+GFNM+K+TKGNVTIK+WDIGGQPRFRS
Sbjct: 31 GKTTLVNVISNGGFIEDTIPTIGFNMKKVTKGNVTIKLWDIGGQPRFRSMWERYCRGVNA 90
Query: 76 -IYMVDAADTDKLEASRNELHALIEK 100
+++VD+AD +K E S+ L LI K
Sbjct: 91 IVFVVDSADREKFEQSKQALQDLINK 116
>sp|P62332|ARF6_RAT ADP-ribosylation factor 6 OS=Rattus norvegicus GN=Arf6 PE=1 SV=2
Length = 175
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 12/66 (18%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPTVGFN+ +T NV VWD+GGQ + R I++VD AD D+++ +R
Sbjct: 42 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQ 101
Query: 93 ELHALI 98
ELH +I
Sbjct: 102 ELHRII 107
>sp|Q007T5|ARF6_PIG ADP-ribosylation factor 6 OS=Sus scrofa GN=ARF6 PE=2 SV=1
Length = 175
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 12/66 (18%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPTVGFN+ +T NV VWD+GGQ + R I++VD AD D+++ +R
Sbjct: 42 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQ 101
Query: 93 ELHALI 98
ELH +I
Sbjct: 102 ELHRII 107
>sp|P62331|ARF6_MOUSE ADP-ribosylation factor 6 OS=Mus musculus GN=Arf6 PE=1 SV=2
Length = 175
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 12/66 (18%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPTVGFN+ +T NV VWD+GGQ + R I++VD AD D+++ +R
Sbjct: 42 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQ 101
Query: 93 ELHALI 98
ELH +I
Sbjct: 102 ELHRII 107
>sp|P62330|ARF6_HUMAN ADP-ribosylation factor 6 OS=Homo sapiens GN=ARF6 PE=1 SV=2
Length = 175
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 12/66 (18%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPTVGFN+ +T NV VWD+GGQ + R I++VD AD D+++ +R
Sbjct: 42 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQ 101
Query: 93 ELHALI 98
ELH +I
Sbjct: 102 ELHRII 107
>sp|P26990|ARF6_CHICK ADP-ribosylation factor 6 OS=Gallus gallus GN=ARF6 PE=2 SV=3
Length = 175
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 12/66 (18%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPTVGFN+ +T NV VWD+GGQ + R I++VD AD D+++ +R
Sbjct: 42 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQ 101
Query: 93 ELHALI 98
ELH +I
Sbjct: 102 ELHRII 107
>sp|P40946|ARF3_DROME ADP-ribosylation factor 3 OS=Drosophila melanogaster GN=Arf51F PE=2
SV=3
Length = 175
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 12/66 (18%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPTVGFN+ +T NV VWD+GGQ + R I++VD AD D+++ +R
Sbjct: 42 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEART 101
Query: 93 ELHALI 98
ELH +I
Sbjct: 102 ELHRII 107
>sp|Q96361|ARF1_BRARP ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis
GN=ARF1 PE=2 SV=3
Length = 182
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQ----PRFRS--------IYMVDAADTDKLEASRN 92
IPT+GFN+ + N+ +VWD+GGQ P +R IY+VD++DTD++ ++
Sbjct: 46 IPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKE 105
Query: 93 ELHALIEK 100
E HA++E+
Sbjct: 106 EFHAILEE 113
>sp|P40940|ARF3_ARATH ADP-ribosylation factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2
Length = 182
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQ----PRFRS--------IYMVDAADTDKLEASRN 92
IPT+GFN+ + N+ +VWD+GGQ P +R IY+VD++DTD++ ++
Sbjct: 46 IPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKE 105
Query: 93 ELHALIEK 100
E HA++E+
Sbjct: 106 EFHAILEE 113
>sp|Q9Y7Z2|ARF6_SCHPO ADP-ribosylation factor 6 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=arf6 PE=3 SV=1
Length = 184
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 12/67 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPTVGFN+ +T N+ VWD+GGQ + R I++VD+AD++++ +R
Sbjct: 50 IPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQ 109
Query: 93 ELHALIE 99
ELH +I
Sbjct: 110 ELHRIIS 116
>sp|P51645|ARF6_XENLA ADP-ribosylation factor 6 OS=Xenopus laevis GN=arf6 PE=2 SV=2
Length = 175
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 12/66 (18%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPTVGFN+ +T NV VWD+GGQ + R I++VD D D+++ +R
Sbjct: 42 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCPDRDRIDEARQ 101
Query: 93 ELHALI 98
ELH +I
Sbjct: 102 ELHRII 107
>sp|P40616|ARL1_HUMAN ADP-ribosylation factor-like protein 1 OS=Homo sapiens GN=ARL1 PE=1
SV=1
Length = 181
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQ----PRFRS--------IYMVDAADTDKLEASRN 92
IPT+GFN+ +T N+ +VWD+GGQ P +R IY+VD+ D D++ S++
Sbjct: 46 IPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKS 105
Query: 93 ELHALIEK 100
EL A++E+
Sbjct: 106 ELVAMLEE 113
>sp|Q2YDM1|ARL1_BOVIN ADP-ribosylation factor-like protein 1 OS=Bos taurus GN=ARL1 PE=2
SV=1
Length = 181
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQ----PRFRS--------IYMVDAADTDKLEASRN 92
IPT+GFN+ +T N+ +VWD+GGQ P +R IY+VD+ D D++ S++
Sbjct: 46 IPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKS 105
Query: 93 ELHALIEK 100
EL A++E+
Sbjct: 106 ELVAMLEE 113
>sp|P61212|ARL1_RAT ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus GN=Arl1
PE=1 SV=1
Length = 181
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQ----PRFRS--------IYMVDAADTDKLEASRN 92
IPT+GFN+ +T N+ +VWD+GGQ P +R IY+VD+ D D++ S++
Sbjct: 46 IPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKS 105
Query: 93 ELHALIEK 100
EL A++E+
Sbjct: 106 ELVAMLEE 113
>sp|P61211|ARL1_MOUSE ADP-ribosylation factor-like protein 1 OS=Mus musculus GN=Arl1 PE=2
SV=1
Length = 181
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQ----PRFRS--------IYMVDAADTDKLEASRN 92
IPT+GFN+ +T N+ +VWD+GGQ P +R IY+VD+ D D++ S++
Sbjct: 46 IPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKS 105
Query: 93 ELHALIEK 100
EL A++E+
Sbjct: 106 ELVAMLEE 113
>sp|Q9SHU5|ARF4_ARATH Probable ADP-ribosylation factor At2g15310 OS=Arabidopsis thaliana
GN=At2g15310 PE=2 SV=3
Length = 205
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 12/66 (18%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
+PT+GFN+ + + VWDIGGQ + R I++VD++D+++L +RN
Sbjct: 46 VPTIGFNLETVEYKGINFTVWDIGGQEKIRKLWRHYFQNAQGLIFVVDSSDSERLSEARN 105
Query: 93 ELHALI 98
ELH ++
Sbjct: 106 ELHRIL 111
>sp|Q20758|ARL1_CAEEL ADP-ribosylation factor-like protein 1 OS=Caenorhabditis elegans
GN=arl-1 PE=3 SV=2
Length = 180
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQ----PRFRS--------IYMVDAADTDKLEASRN 92
IPT+GFN+ ++ N+ +VWD+GGQ P +R IY+VD+AD D++ SR
Sbjct: 45 IPTIGFNVEQVEYKNLKFQVWDLGGQTSIRPYWRCYYANTDAIIYVVDSADRDRVGISRQ 104
Query: 93 ELHALIEK 100
EL ++++
Sbjct: 105 ELATMLQE 112
>sp|P25160|ARL1_DROME ADP-ribosylation factor-like protein 1 OS=Drosophila melanogaster
GN=Arf72A PE=2 SV=5
Length = 180
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQ----PRFRS--------IYMVDAADTDKLEASRN 92
IPT+GFN+ ++T N+ +VWD+GGQ P +R IY+VD+AD D++ S++
Sbjct: 45 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKD 104
Query: 93 ELHALIEK 100
EL ++ +
Sbjct: 105 ELLYMLRE 112
>sp|O48649|ARF1_SALBA ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3
Length = 181
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPT+GFN+ + N++ VWD+GGQ + R I++VD+ D D++ +R+
Sbjct: 46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVGEARD 105
Query: 93 ELHALIEK 100
ELH ++ +
Sbjct: 106 ELHRMLNE 113
>sp|P49076|ARF_MAIZE ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2
Length = 181
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPT+GFN+ + N++ VWD+GGQ + R I++VD+ D D++ +R+
Sbjct: 46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARD 105
Query: 93 ELHALIEK 100
ELH ++ +
Sbjct: 106 ELHRMLNE 113
>sp|P51822|ARF1_DAUCA ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2
Length = 181
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPT+GFN+ + N++ VWD+GGQ + R I++VD+ D D++ +R+
Sbjct: 46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARD 105
Query: 93 ELHALIEK 100
ELH ++ +
Sbjct: 106 ELHRMLNE 113
>sp|O48920|ARF_VIGUN ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3
Length = 181
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPT+GFN+ + N++ VWD+GGQ + R I++VD+ D D++ +R+
Sbjct: 46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARD 105
Query: 93 ELHALIEK 100
ELH ++ +
Sbjct: 106 ELHRMLNE 113
>sp|P36397|ARF1_ARATH ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2
Length = 181
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPT+GFN+ + N++ VWD+GGQ + R I++VD+ D D++ +R+
Sbjct: 46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARD 105
Query: 93 ELHALIEK 100
ELH ++ +
Sbjct: 106 ELHRMLNE 113
>sp|P0DH91|ARF2B_ARATH ADP-ribosylation factor 2-B OS=Arabidopsis thaliana GN=ARF2-B PE=2
SV=1
Length = 181
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPT+GFN+ + N++ VWD+GGQ + R I++VD+ D D++ +R+
Sbjct: 46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARD 105
Query: 93 ELHALIEK 100
ELH ++ +
Sbjct: 106 ELHRMLNE 113
>sp|Q9LQC8|ARF2A_ARATH ADP-ribosylation factor 2-A OS=Arabidopsis thaliana GN=ARF2-A PE=2
SV=2
Length = 181
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPT+GFN+ + N++ VWD+GGQ + R I++VD+ D D++ +R+
Sbjct: 46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARD 105
Query: 93 ELHALIEK 100
ELH ++ +
Sbjct: 106 ELHRMLNE 113
>sp|P61208|ARL4C_MOUSE ADP-ribosylation factor-like protein 4C OS=Mus musculus GN=Arl4c
PE=2 SV=1
Length = 192
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 17/70 (24%)
Query: 43 DMIPTVGFNMRKITKGNVTIK-----VWDIGGQPRFRS------------IYMVDAADTD 85
+ +PT+GFN KI N T K WD+GGQ + R IY+VD+ D D
Sbjct: 40 NTVPTIGFNTEKIKLSNGTAKGISCHFWDVGGQEKLRPLWKSYSRCTDGIIYVVDSVDVD 99
Query: 86 KLEASRNELH 95
+LE ++ ELH
Sbjct: 100 RLEEAKTELH 109
>sp|P56559|ARL4C_HUMAN ADP-ribosylation factor-like protein 4C OS=Homo sapiens GN=ARL4C
PE=1 SV=1
Length = 192
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 17/70 (24%)
Query: 43 DMIPTVGFNMRKITKGNVTIK-----VWDIGGQPRFRS------------IYMVDAADTD 85
+ +PT+GFN KI N T K WD+GGQ + R IY+VD+ D D
Sbjct: 40 NTVPTIGFNTEKIKLSNGTAKGISCHFWDVGGQEKLRPLWKSYSRCTDGIIYVVDSVDVD 99
Query: 86 KLEASRNELH 95
+LE ++ ELH
Sbjct: 100 RLEEAKTELH 109
>sp|Q94650|ARF1_PLAFA ADP-ribosylation factor 1 OS=Plasmodium falciparum GN=ARF1 PE=1
SV=3
Length = 181
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPT+GFN+ + N++ VWD+GGQ + R I++VD+ D ++++ +R
Sbjct: 46 IPTIGFNVETVEFRNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDARE 105
Query: 93 ELHALIEK 100
ELH +I +
Sbjct: 106 ELHRMINE 113
>sp|Q7KQL3|ARF1_PLAF7 ADP-ribosylation factor 1 OS=Plasmodium falciparum (isolate 3D7)
GN=ARF1 PE=1 SV=1
Length = 181
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPT+GFN+ + N++ VWD+GGQ + R I++VD+ D ++++ +R
Sbjct: 46 IPTIGFNVETVEFRNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDARE 105
Query: 93 ELHALIEK 100
ELH +I +
Sbjct: 106 ELHRMINE 113
>sp|P26991|ARF_GIAIN ADP-ribosylation factor OS=Giardia intestinalis PE=3 SV=3
Length = 191
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 14/68 (20%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTD--KLEAS 90
+PT+GFN+ + N+ VWD+GGQ R IY++D+AD + ++E +
Sbjct: 46 VPTIGFNVETVEYKNINFTVWDVGGQDSIRPLWRHYYQNTDALIYVIDSADLEPKRIEDA 105
Query: 91 RNELHALI 98
+NELH L+
Sbjct: 106 KNELHTLL 113
>sp|Q94231|ARF11_CAEEL ADP-ribosylation factor 1-like 1 OS=Caenorhabditis elegans
GN=arf-1.1 PE=3 SV=3
Length = 179
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 43/70 (61%), Gaps = 12/70 (17%)
Query: 43 DMIPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEAS 90
+ IPT+GFN+ +T +T+ VWD+GGQ + R+ +++VD++D +++ +
Sbjct: 44 NTIPTIGFNVETVTFQKITLTVWDVGGQKKIRALWKYYFPNTTTLVFVVDSSDIERIPEA 103
Query: 91 RNELHALIEK 100
+ EL +L+ +
Sbjct: 104 KEELFSLLAE 113
>sp|P22274|ARF_CANAL ADP-ribosylation factor OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=ARF1 PE=3 SV=4
Length = 179
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPT+GFN+ + N++ VWD+GGQ + R I++VD+ D D++ +R
Sbjct: 46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRYYFQNTQGIIFVVDSNDRDRINEARE 105
Query: 93 ELHALIEK 100
EL +++ +
Sbjct: 106 ELQSMLNE 113
>sp|P40994|ARF3_YEAST ADP-ribosylation factor 3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ARF3 PE=1 SV=2
Length = 183
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 12/65 (18%)
Query: 46 PTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRNE 93
PTVGFN+ +T NV +WD+GGQ R R I+++D++ +++E ++ E
Sbjct: 47 PTVGFNVETVTYKNVKFNMWDVGGQQRLRPLWRHYFPATTALIFVIDSSARNRMEEAKEE 106
Query: 94 LHALI 98
L+++I
Sbjct: 107 LYSII 111
>sp|P51823|ARF2_ORYSJ ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF
PE=2 SV=2
Length = 181
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPT+GFN+ + N++ VWD+GGQ + R I++VD+ D +++ +R+
Sbjct: 46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARD 105
Query: 93 ELHALIEK 100
ELH ++ +
Sbjct: 106 ELHRMLNE 113
>sp|Q06396|ARF1_ORYSJ ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica
GN=Os01g0813400 PE=2 SV=3
Length = 181
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPT+GFN+ + N++ VWD+GGQ + R I++VD+ D +++ +R+
Sbjct: 46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARD 105
Query: 93 ELHALIEK 100
ELH ++ +
Sbjct: 106 ELHRMLNE 113
>sp|P51821|ARF1_CHLRE ADP-ribosylation factor 1 OS=Chlamydomonas reinhardtii GN=ARF1 PE=2
SV=2
Length = 181
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 12/68 (17%)
Query: 45 IPTVGFNMRKITKGNVTIKVWDIGGQPRFRS------------IYMVDAADTDKLEASRN 92
IPT+GFN+ + N++ VWD+GGQ + R I++VD+ D +++ +R+
Sbjct: 46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARD 105
Query: 93 ELHALIEK 100
ELH ++ +
Sbjct: 106 ELHRMLNE 113
>sp|P38116|ARL1_YEAST ADP-ribosylation factor-like protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ARL1 PE=1 SV=4
Length = 183
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 12/67 (17%)
Query: 46 PTVGFNMRKITKGNVTIKVWDIGGQ----PRFRS--------IYMVDAADTDKLEASRNE 93
PT+GFN+ ++ N+ + VWD+GGQ P +R I++VD+ D D++ + E
Sbjct: 48 PTIGFNVETLSYKNLKLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKE 107
Query: 94 LHALIEK 100
LH ++++
Sbjct: 108 LHLMLQE 114
>sp|Q99PE9|ARL4D_MOUSE ADP-ribosylation factor-like protein 4D OS=Mus musculus GN=Arl4d
PE=2 SV=2
Length = 201
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 20/75 (26%)
Query: 39 QFSQDMIPTVGFNMRKI------TKGNVTIKVWDIGGQPRFRS------------IYMVD 80
+F Q +PT GFN KI ++G +T +VWD+GGQ + R +++VD
Sbjct: 45 EFVQS-VPTKGFNTEKIRVPLGGSRG-ITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVD 102
Query: 81 AADTDKLEASRNELH 95
+A+T++LE +R ELH
Sbjct: 103 SAETERLEEARMELH 117
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,039,860
Number of Sequences: 539616
Number of extensions: 1327192
Number of successful extensions: 3849
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 248
Number of HSP's that attempted gapping in prelim test: 3454
Number of HSP's gapped (non-prelim): 527
length of query: 101
length of database: 191,569,459
effective HSP length: 70
effective length of query: 31
effective length of database: 153,796,339
effective search space: 4767686509
effective search space used: 4767686509
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)