BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2971
(134 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O75751|S22A3_HUMAN Solute carrier family 22 member 3 OS=Homo sapiens GN=SLC22A3 PE=1
SV=1
Length = 556
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 60 FDDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
FD+ L +GEFGR+Q+ +F + + AF++ +F+ P+ YWC+ P + L
Sbjct: 4 FDEALQRVGEFGRFQRRVFLLLCLTGVTFAFLFVGVVFLGTQPDHYWCRGPSAAAL 59
>sp|Q9WTW5|S22A3_MOUSE Solute carrier family 22 member 3 OS=Mus musculus GN=Slc22a3 PE=2
SV=1
Length = 551
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 60 FDDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
FD L GEFGR+Q+ +F + + AF++ +F+ P+ YWC+ P + L
Sbjct: 4 FDQALRKAGEFGRFQRRVFLLLCLTGVTFAFLFVGVVFLGSQPDYYWCRGPRATAL 59
>sp|O88446|S22A3_RAT Solute carrier family 22 member 3 OS=Rattus norvegicus GN=Slc22a3
PE=2 SV=1
Length = 551
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 60 FDDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
FD L GEFGR+Q+ +F + + AF++ +F+ P+ YWC+ P + L
Sbjct: 4 FDQALRKAGEFGRFQRRVFLLLCLTGVTFAFLFVGVVFLGSQPDYYWCRGPRATAL 59
>sp|Q95R48|OCTL_DROME Organic cation transporter-like protein OS=Drosophila melanogaster
GN=Orct2 PE=2 SV=2
Length = 567
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 58 LDFDDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVP------- 110
+ +D+ + HLG+FGRYQKI++F + + VAF A +F+ P+ + C +P
Sbjct: 1 MGYDEAIIHLGDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPD-FRCALPFENGSSY 59
Query: 111 -------ELSHLDPEQSQFYGIKF 127
LS+ + E+ +Y + +
Sbjct: 60 DLPTHLWNLSYPENERCSYYDVDY 83
>sp|Q9WTN6|S22AL_MOUSE Solute carrier family 22 member 21 OS=Mus musculus GN=Slc22a21 PE=2
SV=1
Length = 564
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 58 LDFDDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
LD+D++ LGE+G +Q+++FF + F + +F+T IPE + C++P+ +L
Sbjct: 2 LDYDEVTAFLGEWGTFQRLIFFLLSASIIPNGFTGLSAVFLTAIPE-HRCRIPDTVNL 58
>sp|O08966|S22A1_MOUSE Solute carrier family 22 member 1 OS=Mus musculus GN=Slc22a1 PE=2
SV=2
Length = 556
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 61 DDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
DD+L H+GEFG +QK F + + S+A +Y +F+ P+ + C+ P ++ L
Sbjct: 5 DDVLEHVGEFGWFQKQAFLLLCLISASLAPIYVGIVFLGFTPDHH-CRSPGVAEL 58
>sp|Q9VCA2|ORCT_DROME Organic cation transporter protein OS=Drosophila melanogaster
GN=Orct PE=1 SV=1
Length = 548
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 58 LDFDDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVP 110
+ +DD++ HLGEFG YQK +++ + A AF A +F+ P+ + C +P
Sbjct: 1 MGYDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPD-FRCALP 52
>sp|Q63089|S22A1_RAT Solute carrier family 22 member 1 OS=Rattus norvegicus GN=Slc22a1
PE=1 SV=1
Length = 556
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 61 DDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
DD+L +GEFG +QK F + + S+A +Y +F+ P Y CQ P ++ L
Sbjct: 5 DDVLEQVGEFGWFQKQAFLLLCLISASLAPIYVGIVFLGFTPGHY-CQNPGVAEL 58
>sp|O76082|S22A5_HUMAN Solute carrier family 22 member 5 OS=Homo sapiens GN=SLC22A5 PE=1
SV=1
Length = 557
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 59 DFDDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
D+D++ LGE+G +Q+++FF + F + +F+ PE + C+VP+ ++L
Sbjct: 3 DYDEVTAFLGEWGPFQRLIFFLLSASIIPNGFTGLSSVFLIATPE-HRCRVPDAANL 58
>sp|Q86VW1|S22AG_HUMAN Solute carrier family 22 member 16 OS=Homo sapiens GN=SLC22A16 PE=1
SV=1
Length = 577
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 60 FDDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVP 110
F+ I H+G FGR+Q++L+F S Y A +F+ V P + C+ P
Sbjct: 6 FEGIYDHVGHFGRFQRVLYFICAFQNISCGIHYLASVFMGVTPH-HVCRPP 55
>sp|O02713|S22A2_PIG Solute carrier family 22 member 2 OS=Sus scrofa GN=SLC22A2 PE=2
SV=1
Length = 554
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 58 LDFDDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
L DDIL H GEF +QK FF + + + +Y +F+ IP+ + C+ P ++ L
Sbjct: 2 LTVDDILEHTGEFNFFQKQTFFLLALLSAAFTPIYVGIVFLGFIPD-HRCRSPGVAEL 58
>sp|Q497L8|S22AG_MOUSE Solute carrier family 22 member 16 OS=Mus musculus GN=Slc22a16 PE=2
SV=1
Length = 649
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 63 ILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVP 110
I H+G FGR+Q +L+ + S Y + +F+++IPE + C+ P
Sbjct: 9 IFDHIGHFGRFQIVLYLICAYQSLSCGIHYLSSVFLSIIPE-HACKPP 55
>sp|Q9H015|S22A4_HUMAN Solute carrier family 22 member 4 OS=Homo sapiens GN=SLC22A4 PE=1
SV=3
Length = 551
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 59 DFDDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
D+D+++ LGE+G +Q+++FF + F + +F+ PE + C+VP+ ++L
Sbjct: 3 DYDEVIAFLGEWGPFQRLIFFLLSASIIPNGFNGMSVVFLAGTPE-HRCRVPDAANL 58
>sp|Q66KG0|S22AG_XENLA Solute carrier family 22 member 16 OS=Xenopus laevis GN=slc22a16
PE=2 SV=2
Length = 566
Score = 37.7 bits (86), Expect = 0.018, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 61 DDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVP 110
+ + ++G FGR+Q L+FA S Y A +FI V P ++ C+ P
Sbjct: 2 EHLFDYVGHFGRFQAYLYFASAFQTISCGIHYLASVFIAVTP-KFICRAP 50
>sp|A7MBE0|S22A1_BOVIN Solute carrier family 22 member 1 OS=Bos taurus GN=SLC22A1 PE=2
SV=1
Length = 563
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 58 LDFDDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
L DD+L +GEFG +QK F + + + A +Y +F+ P+ + C+ P ++ L
Sbjct: 2 LTVDDVLEQVGEFGWFQKQTFLILCLLSAAFAPIYVGIVFLAFTPD-HRCRSPGVAEL 58
>sp|O70577|S22A2_MOUSE Solute carrier family 22 member 2 OS=Mus musculus GN=Slc22a2 PE=2
SV=1
Length = 553
Score = 37.4 bits (85), Expect = 0.024, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 61 DDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
DDIL H+GEF +QK FF + + + +Y +F+ P + C+ P ++ L
Sbjct: 5 DDILEHIGEFHLFQKQTFFLLALLSGAFTPIYVGIVFLGFTPNHH-CRSPGVAEL 58
>sp|O15244|S22A2_HUMAN Solute carrier family 22 member 2 OS=Homo sapiens GN=SLC22A2 PE=1
SV=2
Length = 555
Score = 37.4 bits (85), Expect = 0.025, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 61 DDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
DD+L H GEF +QK +FF + + + A +Y +F+ P+ + C+ P ++ L
Sbjct: 6 DDVLEHGGEFHFFQKQMFFLLALLSATFAPIYVGIVFLGFTPD-HRCRSPGVAEL 59
>sp|A9CB25|S22A4_PAPAN Solute carrier family 22 member 4 OS=Papio anubis GN=SLC22A4 PE=3
SV=1
Length = 551
Score = 36.6 bits (83), Expect = 0.043, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 59 DFDDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
D+D+ + LGE+G +Q+++FF + F + +F+ PE + C+VP+ ++L
Sbjct: 3 DYDEAIAFLGEWGPFQRLIFFLLSASIIPNGFNGMSVVFLAGTPE-HRCRVPDAANL 58
>sp|Q9R0W2|S22A2_RAT Solute carrier family 22 member 2 OS=Rattus norvegicus GN=Slc22a2
PE=1 SV=1
Length = 555
Score = 36.6 bits (83), Expect = 0.044, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 61 DDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERY--------------W 106
DDIL H+GEF +QK FF + + + +Y +F+ P+ + W
Sbjct: 5 DDILEHIGEFHLFQKQTFFLLALLSGAFTPIYVGIVFLGFTPDHHCWSPGAAKLSQRCGW 64
Query: 107 CQVPELSHLDP 117
Q EL++ P
Sbjct: 65 SQAEELNYTVP 75
>sp|Q9Z306|S22A4_MOUSE Solute carrier family 22 member 4 OS=Mus musculus GN=Slc22a4 PE=1
SV=1
Length = 553
Score = 35.8 bits (81), Expect = 0.076, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 59 DFDDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
D+D+++ LGE+G +Q+++FF + F + +F+ PE + C VP+ +L
Sbjct: 3 DYDEVIAFLGEWGPFQRLIFFLLSASIIPNGFNGMSVVFLAGTPE-HRCLVPDTVNL 58
>sp|Q5R5H7|S22A2_PONAB Solute carrier family 22 member 2 OS=Pongo abelii GN=SLC22A2 PE=2
SV=1
Length = 555
Score = 35.8 bits (81), Expect = 0.081, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 61 DDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
DD+L H GEF +QK +FF + + + +Y +F+ P+ + C+ P ++ L
Sbjct: 6 DDVLEHGGEFHFFQKQMFFLLALLSATFTPIYVGIVFLGFTPD-HRCRSPGVAEL 59
>sp|Q863T6|S22A1_PIG Solute carrier family 22 member 1 OS=Sus scrofa GN=SLC22A1 PE=2
SV=1
Length = 554
Score = 35.8 bits (81), Expect = 0.089, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 61 DDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
DD+L +GEFG +QK F + + + A +Y +F+ P+ + C+ P ++ L
Sbjct: 5 DDVLEQVGEFGWFQKQAFLNLCLTSVAFAPIYVGIVFLGFTPD-HRCRSPGVAEL 58
>sp|O77504|S22A1_RABIT Solute carrier family 22 member 1 OS=Oryctolagus cuniculus
GN=SLC22A1 PE=1 SV=1
Length = 554
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 61 DDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL----- 115
DD+L +GEFG +QK F + + +A +Y +F+ P+ + C+ P + L
Sbjct: 5 DDVLEQVGEFGWFQKRTFLFLCLISAILAPIYLGIVFLGFTPD-HRCRSPGVDELSQRCG 63
Query: 116 -DPEQSQFYGI 125
PE+ Y +
Sbjct: 64 WSPEEELNYTV 74
>sp|Q17QN9|S22AG_BOVIN Solute carrier family 22 member 16 OS=Bos taurus GN=SLC22A16 PE=2
SV=2
Length = 572
Score = 33.9 bits (76), Expect = 0.27, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 63 ILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVP 110
I +G FGRYQ L+F S Y A +F++V P+ + C+ P
Sbjct: 9 IFDSVGHFGRYQIFLYFICAFQNISCGIHYLASVFLSVSPQ-HTCRPP 55
>sp|O70594|S22A5_RAT Solute carrier family 22 member 5 OS=Rattus norvegicus GN=Slc22a5
PE=1 SV=1
Length = 557
Score = 33.9 bits (76), Expect = 0.28, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 59 DFDDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
D+D++ LGE+G +Q+++FF + F + +F+ PE + C VP +L
Sbjct: 3 DYDEVTAFLGEWGPFQRLIFFLLSASIIPNGFNGMSIVFLAGTPE-HRCLVPHTVNL 58
>sp|Q9Z0E8|S22A5_MOUSE Solute carrier family 22 member 5 OS=Mus musculus GN=Slc22a5 PE=1
SV=1
Length = 557
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 59 DFDDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
D+D++ LGE+G +Q+++FF + F + +F+ PE + C VP +L
Sbjct: 3 DYDEVTAFLGEWGPFQRLIFFLLSASIIPNGFNGMSIVFLAGTPE-HRCLVPHTVNL 58
>sp|Q9R141|S22A4_RAT Solute carrier family 22 member 4 OS=Rattus norvegicus GN=Slc22a4
PE=1 SV=1
Length = 553
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 59 DFDDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
D+D+++ LG++G +Q+++FF + F + +F+ PE + C VP +L
Sbjct: 3 DYDEVIAFLGDWGPFQRLIFFLLSASIIPNGFNGMSVVFLAGTPE-HRCLVPHTVNL 58
>sp|Q9Y226|S22AD_HUMAN Solute carrier family 22 member 13 OS=Homo sapiens GN=SLC22A13 PE=2
SV=2
Length = 551
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 60 FDDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQV 109
F +L +G+FGR+Q L + F F +FA +F+ V+ E + C V
Sbjct: 4 FVQVLAEIGDFGRFQIQLLILLCVLNFLSPFYFFAHVFM-VLDEPHHCAV 52
>sp|Q6A4L0|S22AD_MOUSE Solute carrier family 22 member 13 OS=Mus musculus GN=Slc22a13 PE=2
SV=3
Length = 551
Score = 33.1 bits (74), Expect = 0.52, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 60 FDDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQV 109
F ++ +G+FGR+Q L M F AF F Q+F+ V+ E + C V
Sbjct: 4 FAQVMAEVGDFGRFQVRLTILMGIPNFLAAFFIFGQVFM-VLDEAHHCSV 52
>sp|O15245|S22A1_HUMAN Solute carrier family 22 member 1 OS=Homo sapiens GN=SLC22A1 PE=1
SV=2
Length = 554
Score = 32.7 bits (73), Expect = 0.69, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 61 DDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
DDIL +GE G +QK F + + + A + +F+ P+ + CQ P ++ L
Sbjct: 5 DDILEQVGESGWFQKQAFLILCLLSAAFAPICVGIVFLGFTPDHH-CQSPGVAEL 58
>sp|Q8MJI6|S22A2_RABIT Solute carrier family 22 member 2 OS=Oryctolagus cuniculus
GN=SLC22A2 PE=1 SV=1
Length = 554
Score = 32.3 bits (72), Expect = 0.87, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 61 DDILPHLGEFGRYQKILFF--AMIPFAFSVAFVYFAQIFITVIPERYWCQVPELSHL 115
DDIL +G F +QK FF A+I AF+ +Y +F+ P+ + C+ P ++ L
Sbjct: 5 DDILEQVGHFHFFQKQTFFLLALISAAFTP--IYVGIVFLGFTPD-HRCRSPGVAEL 58
>sp|Q9U539|OCT1_CAEEL Organic cation transporter 1 OS=Caenorhabditis elegans GN=oct-1
PE=1 SV=3
Length = 585
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 59 DFDDILPHLGEFGRYQKILFFAM-IPFAFSVAFVYFAQIFITVIPERYWCQVPE 111
DFD +L +G +G YQ + FF + +P + AF F F+ P + C +PE
Sbjct: 25 DFDFVLEQVGNYGTYQIVFFFIICLPTSLPSAFSAFNIPFVVGNPP-HTCHIPE 77
>sp|Q7NV72|DDLA_CHRVO D-alanine--D-alanine ligase A OS=Chromobacterium violaceum (strain
ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB
9131 / NCTC 9757) GN=ddlA PE=3 SV=1
Length = 366
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 40 ENGGPLANGSNANPI-ETDLDFDDILPHLGEFGRYQKILFFAMIPF 84
E G L +NA+P+ + D+ F + LGE G Q +L A IPF
Sbjct: 82 ECSGQLQTAANAHPLAQIDVAFPIVHGTLGEDGSLQGLLRMANIPF 127
>sp|Q6P4M0|DHCR7_XENTR 7-dehydrocholesterol reductase OS=Xenopus tropicalis GN=dhcr7 PE=2
SV=1
Length = 473
Score = 28.9 bits (63), Expect = 8.6, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 24/43 (55%)
Query: 65 PHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPERYWC 107
PH+G++GR ++ +F++ F +AF + + ++Y C
Sbjct: 22 PHVGQWGRAWEVDYFSLAAVLFLLAFAPLIVYYFVMSCDQYQC 64
>sp|P12019|PDE1_DICDI cAMP/cGMP-dependent 3',5'-cAMP/cGMP phosphodiesterase A
OS=Dictyostelium discoideum GN=pdsA PE=1 SV=2
Length = 452
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 49 SNANPIETDLDFDDILPHLGEFGRYQKILFFAMIPFAFSVAFVYFAQIFITVIPE 103
S N I T+L + + P+L FGRYQ + I + F+ Y A V E
Sbjct: 233 STINSISTNLFNNQVWPNLPSFGRYQYFSLASGIEYPFTELVPYNATTMSLVANE 287
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.144 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,560,195
Number of Sequences: 539616
Number of extensions: 2348832
Number of successful extensions: 5249
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 5209
Number of HSP's gapped (non-prelim): 48
length of query: 134
length of database: 191,569,459
effective HSP length: 100
effective length of query: 34
effective length of database: 137,607,859
effective search space: 4678667206
effective search space used: 4678667206
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)