RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy2971
         (134 letters)



>d2a6ta2 d.113.1.7 (A:95-245) mRNA decapping enzyme Dcp2p catalytic
           domain {Schizosaccharomyces pombe [TaxId: 4896]}
          Length = 151

 Score = 24.4 bits (52), Expect = 5.1
 Identities = 10/85 (11%), Positives = 28/85 (32%), Gaps = 1/85 (1%)

Query: 1   MHETVEDASLNMENMIPEPPVKMTYILPKEIPIFKLDEKENGGPLANGSNANPIETD-LD 59
           + E  E+   +  + I         I  + + ++ +          + +     + +  +
Sbjct: 47  IREVYEETGFDCSSRINPNEFIDMTIRGQNVRLYIIPGISLDTRFESRTRKEISKIEWHN 106

Query: 60  FDDILPHLGEFGRYQKILFFAMIPF 84
             D+        +  K  F+ +IPF
Sbjct: 107 LMDLPTFKKNKPQTMKNKFYMVIPF 131


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.325    0.144    0.447 

Gapped
Lambda     K      H
   0.267   0.0501    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 542,909
Number of extensions: 25219
Number of successful extensions: 61
Number of sequences better than 10.0: 1
Number of HSP's gapped: 61
Number of HSP's successfully gapped: 2
Length of query: 134
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 58
Effective length of database: 1,364,116
Effective search space: 79118728
Effective search space used: 79118728
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 48 (22.8 bits)