BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2972
(143 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|383858160|ref|XP_003704570.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Megachile rotundata]
Length = 182
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 93/142 (65%), Gaps = 2/142 (1%)
Query: 3 DLDQLLTETKEAIKNIRTQNTL-SHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFD 60
D ++L+ TKEAI NI + L S LP DVTVEE+KS++ + GQ+I + + + K
Sbjct: 37 DHNELVKLTKEAIDNIIESDPLFSGLPSDVTVEELKSQIAVAQGQAITLYLNRGELPKLG 96
Query: 61 IVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLS 120
IV+ P NT V +LK+ I+R + +KR+ + K+ISW+HVWK Y+L FD +KL N+ +
Sbjct: 97 IVVPPHNTSVLNLKKAIKRHTNLSLKRENVKKKISWKHVWKKYYLCFDNVKLVNDNENIK 156
Query: 121 ELGIESQCEITFVKRLKDKVRI 142
GI ++ E+ +VK+ ++K ++
Sbjct: 157 AYGITNKAELYYVKKRREKNKL 178
>gi|328782996|ref|XP_003250223.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Apis mellifera]
Length = 175
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 92/142 (64%), Gaps = 2/142 (1%)
Query: 3 DLDQLLTETKEAIKNI-RTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFD 60
D ++L+ TKEAI NI + LS LP DVT+EE+K+++ + GQ+I + + + K
Sbjct: 30 DHNELVKLTKEAIHNIIESDPLLSGLPTDVTIEELKAQIAVAQGQAITLYLNRGELPKLG 89
Query: 61 IVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLS 120
IV+ P NT V DLK+ I+R + +KR+ + K+ISW+H+WK Y L F+ IKL N+ +
Sbjct: 90 IVVPPHNTTVLDLKKAIKRHTNLALKREKIKKKISWKHIWKKYHLCFENIKLINDNENIK 149
Query: 121 ELGIESQCEITFVKRLKDKVRI 142
GI ++ E+ ++KR ++K ++
Sbjct: 150 TYGITNKAELYYLKRRREKNKL 171
>gi|346473065|gb|AEO36377.1| hypothetical protein [Amblyomma maculatum]
Length = 171
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 86/123 (69%), Gaps = 2/123 (1%)
Query: 18 IRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQ-ADNKKFDIVISPKNTRVSDLKRT 76
I + L++L +VT +E+KS + L HGQ++ + ADN + +V+ K T V DLK+
Sbjct: 50 ISSDPLLNNLHPEVTTDELKSYLALEHGQAMSLVVHKADNDYYTVVVEQKAT-VLDLKKA 108
Query: 77 IERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRL 136
+ R +T++M RKG+ + +SW++VWK+YWLSF+G L ++K+LL + GI + +++FVKRL
Sbjct: 109 LRRHVTLRMARKGVKRVLSWKYVWKTYWLSFEGELLRDDKALLRDFGIRNNSQLSFVKRL 168
Query: 137 KDK 139
+++
Sbjct: 169 RER 171
>gi|340722517|ref|XP_003399651.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Bombus terrestris]
Length = 180
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 92/142 (64%), Gaps = 2/142 (1%)
Query: 3 DLDQLLTETKEAIKNI-RTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFD 60
D D+L+ TK AI+NI + LS LP DVT+EE+K+++ + GQ+I + + + K
Sbjct: 35 DHDELVKLTKGAIRNIIESDPLLSGLPADVTIEELKAQIAVAQGQAITLYLNRGELPKLG 94
Query: 61 IVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLS 120
IV+ P +T V DLK+ I+R + +KR+ + K+ISW+H+WK Y L F+ ++L N+ +
Sbjct: 95 IVVPPHHTTVLDLKKAIKRHTNLSLKREKVKKKISWKHIWKKYHLCFENVRLINDNENIK 154
Query: 121 ELGIESQCEITFVKRLKDKVRI 142
GI ++ E+ +VKR ++K ++
Sbjct: 155 AYGITNKAELHYVKRRREKNKL 176
>gi|427786405|gb|JAA58654.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 168
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 77/116 (66%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITM 83
L++L +VT +E+K + L HGQ++ + N + V+ + V DLK+ I R +T+
Sbjct: 53 LNNLHPEVTTDELKLYLALEHGQAMSLVVHKANGDYYTVVVEQKATVLDLKKAIRRHVTL 112
Query: 84 QMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+M RKG+ + +SW++VWK+YWLSFDG L +K+LL + GI + ++TFVKRL ++
Sbjct: 113 RMARKGVKRVLSWKYVWKTYWLSFDGELLKEDKALLRDFGIRNNSQLTFVKRLHER 168
>gi|260814781|ref|XP_002602092.1| hypothetical protein BRAFLDRAFT_61248 [Branchiostoma floridae]
gi|229287398|gb|EEN58104.1| hypothetical protein BRAFLDRAFT_61248 [Branchiostoma floridae]
Length = 136
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 82/130 (63%)
Query: 11 TKEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRV 70
+E + + LS LP VT++E+KS++ L +GQ++ ++ + ++ P++ V
Sbjct: 4 VREGVAELVKDPLLSDLPAGVTLDEVKSQIALEYGQAMKVIVRKECGGIMPIVVPQDATV 63
Query: 71 SDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEI 130
DLK I R +T++ R+G + +ISWR+VW++YWL+FDG KL+ L + GI ++ E+
Sbjct: 64 VDLKHAISRYVTLKQTREGGTTKISWRYVWRTYWLTFDGEKLSQNNKKLKDYGIRNRAEL 123
Query: 131 TFVKRLKDKV 140
F+KRL+ KV
Sbjct: 124 RFIKRLRSKV 133
>gi|156545358|ref|XP_001606078.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Nasonia vitripennis]
Length = 171
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 91/141 (64%), Gaps = 2/141 (1%)
Query: 5 DQLLTETKEAIKNI-RTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADN-KKFDIV 62
++L+ TKEAI NI + S+LP D T++EI++++ + GQSI ++ IV
Sbjct: 31 EELVKLTKEAIANIIESDPIFSNLPLDPTIDEIRAQIAVARGQSIELFLERGPLPTLSIV 90
Query: 63 ISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSEL 122
+ KNT V +LK+ ++R + +KR+ ++K+ISW+HVWK Y+LSFD + L ++K +
Sbjct: 91 VPSKNTSVLELKKAVKRHTNLALKREKVTKKISWKHVWKKYYLSFDNVTLADDKEDIRNY 150
Query: 123 GIESQCEITFVKRLKDKVRIK 143
GI S+ + +VKR ++K R++
Sbjct: 151 GIRSKAVLKYVKRRREKNRVQ 171
>gi|350418490|ref|XP_003491874.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Bombus impatiens]
Length = 180
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 92/142 (64%), Gaps = 2/142 (1%)
Query: 3 DLDQLLTETKEAIKNI-RTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFD 60
D D+L+ TK AI+NI + LS LP DVT+EE+K+++ + GQ+I + + + K
Sbjct: 35 DHDELVKLTKGAIRNIIESDPLLSGLPADVTIEELKAQIAVAQGQAITLYLNRGELPKLG 94
Query: 61 IVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLS 120
IV+ P +T V DLK+ I+R + +KR+ + K+ISW+H+WK Y L F+ ++L ++ +
Sbjct: 95 IVVPPHHTTVLDLKKAIKRHTNLSLKREKVKKKISWKHIWKKYHLCFENVRLIDDNENIK 154
Query: 121 ELGIESQCEITFVKRLKDKVRI 142
GI ++ E+ +VKR ++K ++
Sbjct: 155 AYGITNKVELHYVKRRREKNKL 176
>gi|307182451|gb|EFN69686.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Camponotus
floridanus]
Length = 184
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 89/139 (64%), Gaps = 2/139 (1%)
Query: 6 QLLTETKEAIKN-IRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFDIVI 63
+L+ T+ I N I+ LS LP DVT+EEIKS++ + GQ+I + + + K +V+
Sbjct: 42 ELIKLTRMTIDNMIKNDPLLSGLPSDVTIEEIKSQIAVAQGQAITLFLNRGELPKLAVVV 101
Query: 64 SPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELG 123
P NT V DLK+ I+R + + +KR+ + K+ISW+HVWK Y L F+ I+L+N+ +
Sbjct: 102 PPHNTTVLDLKKAIKRHMNLSLKREDVKKKISWKHVWKKYHLCFEDIRLSNDNENIKAYN 161
Query: 124 IESQCEITFVKRLKDKVRI 142
I ++ E+ FVKR ++K ++
Sbjct: 162 ITNKAELHFVKRRREKNKV 180
>gi|442756633|gb|JAA70475.1| Putative cytochrome c oxidase subunit cox19 [Ixodes ricinus]
Length = 164
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 83/117 (70%), Gaps = 2/117 (1%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKNTRVSDLKRTIERQIT 82
LS+L +VTVEE++S + L HGQ++ + ++AD + +V+ K T V DLK+ ++R T
Sbjct: 49 LSNLHPEVTVEELRSYLALEHGQAMSLRVLRADGDPYTVVVEQKAT-VLDLKKALQRHAT 107
Query: 83 MQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
++M RKG+ + +SWR++W++YWLSF+G L +++LL + GI + E+ F+KR +++
Sbjct: 108 LRMARKGVKRVVSWRYIWRTYWLSFEGQPLNQDRTLLRDAGIRNNSELCFIKRRRER 164
>gi|307200838|gb|EFN80891.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Harpegnathos saltator]
Length = 177
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 90/139 (64%), Gaps = 2/139 (1%)
Query: 6 QLLTETKEAIKNI-RTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFDIVI 63
+L+ TK AI NI + LS LP DVT+EE+KS++ + GQ+I + + + K +V+
Sbjct: 36 ELIKLTKVAIDNIIESDPLLSGLPSDVTIEELKSQIAVAQGQAITLFLNRGELPKLAVVV 95
Query: 64 SPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELG 123
P +T V DLK+ I+R +++ +KR+ + K+ISW+H+WK Y L F+ IKL N + G
Sbjct: 96 PPHDTTVLDLKKAIKRHMSLSLKRENIKKKISWKHIWKKYHLCFEHIKLANNNENIKTYG 155
Query: 124 IESQCEITFVKRLKDKVRI 142
I ++ E+ F+K+ ++K ++
Sbjct: 156 IANKAELHFMKKRREKNKL 174
>gi|332021112|gb|EGI61499.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Acromyrmex
echinatior]
Length = 176
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 88/139 (63%), Gaps = 2/139 (1%)
Query: 6 QLLTETKEAIKN-IRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFDIVI 63
+L+ TK I N + + LS LP DVT+EE+KS++ + GQ+I + + + K +V+
Sbjct: 35 ELVKLTKATIDNLVEHEPLLSGLPSDVTIEELKSQIAVAQGQAITLFLNRGELPKLAVVV 94
Query: 64 SPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELG 123
P NT V DLK+ I+R + +KR+ + K+ISW+HVWK Y L F I+L+N+ + G
Sbjct: 95 PPHNTTVLDLKKAIKRHTNLSLKRENVKKKISWKHVWKKYHLCFGDIRLSNDNENIKAYG 154
Query: 124 IESQCEITFVKRLKDKVRI 142
I ++ E+ F+KR ++K ++
Sbjct: 155 ITNKIELHFIKRRREKNKL 173
>gi|241163699|ref|XP_002409330.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein, putative
[Ixodes scapularis]
gi|215494528|gb|EEC04169.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein, putative
[Ixodes scapularis]
Length = 136
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 83/117 (70%), Gaps = 2/117 (1%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKNTRVSDLKRTIERQIT 82
LS+L +VTVEE++S + L HGQ++ + ++AD + +V+ K T + DLK+ ++R T
Sbjct: 21 LSNLHPEVTVEELRSYLALEHGQAMSLRVLRADGDPYTVVVEQKAT-ILDLKKALQRHAT 79
Query: 83 MQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
++M RKG+ + +SWR++WK+YWLSF+G L +++LL + GI + E+ F+KR +++
Sbjct: 80 LRMARKGVKRVVSWRYIWKTYWLSFEGQPLNQDRTLLRDTGIRNNSELCFIKRRRER 136
>gi|196010539|ref|XP_002115134.1| hypothetical protein TRIADDRAFT_58967 [Trichoplax adhaerens]
gi|190582517|gb|EDV22590.1| hypothetical protein TRIADDRAFT_58967 [Trichoplax adhaerens]
Length = 154
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 87/145 (60%), Gaps = 6/145 (4%)
Query: 5 DQLLTET------KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKK 58
DQLLT + +I + + L+ LP DVT++E+ S + L +G ++ + D+++
Sbjct: 4 DQLLTHNHAMAIFRNSIAEMTKDSLLASLPNDVTIDEVNSLIALDYGLAMTVTVCKDSRE 63
Query: 59 FDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSL 118
VI P+ + K+ +RQ + +KRKG S++I+W++ WKSYWL ++GIKL + S
Sbjct: 64 RIAVIVPQTATIKQFKKAFQRQTLLHLKRKGESRRINWKYYWKSYWLIYEGIKLEKDDSN 123
Query: 119 LSELGIESQCEITFVKRLKDKVRIK 143
L + GI + +TF KRL+ K R+K
Sbjct: 124 LIDYGIGNGAMLTFAKRLQQKGRVK 148
>gi|156365484|ref|XP_001626675.1| predicted protein [Nematostella vectensis]
gi|156213561|gb|EDO34575.1| predicted protein [Nematostella vectensis]
Length = 154
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 78/118 (66%), Gaps = 2/118 (1%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDI--VISPKNTRVSDLKRTIERQI 81
L LP + TVEEI +++ L HG +IM ++ +K I V+ ++ V DLK+ I+R I
Sbjct: 37 LVGLPSEPTVEEITAQLALEHGLAIMVNVRQQDKMATILPVVVVQDATVLDLKKAIQRHI 96
Query: 82 TMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
T++ R+G + ISW++VW+++WL F+G KL+++ L E GI S+ E+TF KRLK K
Sbjct: 97 TLKQTREGGATYISWKYVWRTFWLMFEGQKLSDDHKSLKEYGISSRDEVTFAKRLKRK 154
>gi|443722217|gb|ELU11180.1| hypothetical protein CAPTEDRAFT_157309 [Capitella teleta]
Length = 174
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITM 83
L LP VTVEEI+S++ L HGQ++ ++ + K ++ +N V+DLK+ I +
Sbjct: 60 LQDLPSQVTVEEIRSQIALEHGQAMTVNVRRGDDKVLPIVVLQNATVADLKKAIRHYFHL 119
Query: 84 QMKRKG-LSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLK 137
+ R G + ISWR+VWK WL F+G KLT +K+LL + GI + E+TF+KRL+
Sbjct: 120 NLNRDGDGDRHISWRYVWKRNWLYFNGQKLTEDKTLLKDYGIFNSSEVTFIKRLR 174
>gi|291223915|ref|XP_002731950.1| PREDICTED: chromosome 16 open reading frame 33-like [Saccoglossus
kowalevskii]
Length = 162
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 77/125 (61%)
Query: 13 EAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSD 72
+ +K I LS LP DVT EEI ++ L +GQ++ ++ N + V+ + V D
Sbjct: 36 DGMKEILQDPLLSDLPLDVTEEEINHQIALEYGQALTVKVRKQNGEVIPVVVLQGATVRD 95
Query: 73 LKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITF 132
L+ I+R TM+++R+G +K ISWR++WK+YWL F+ KLT + + GI ++ E+TF
Sbjct: 96 LRNAIKRHFTMKLEREGGNKFISWRYIWKTYWLCFEEEKLTEINKKIKDYGIRNRDEVTF 155
Query: 133 VKRLK 137
VKR +
Sbjct: 156 VKRYR 160
>gi|198438499|ref|XP_002131302.1| PREDICTED: similar to U11/U12 snRNP 25K protein isoform 1 [Ciona
intestinalis]
Length = 143
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 79/117 (67%), Gaps = 2/117 (1%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQ-ADNKKFDIVISPKNTRVSDLKRTIERQIT 82
L+ LPQ+VT+EE+ +++ L GQ++ I+ AD + +++ ++ + +LK+ I R +
Sbjct: 28 LNDLPQEVTLEEVNAKIALEFGQAMTIRIRRADGFTYPVIVK-QDATIGELKKAITRHVQ 86
Query: 83 MQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
++ +R+G ++ ISWR VWKSYWL +DG KL + L + G+ + E+TF+KRLK+K
Sbjct: 87 LKQQREGGNQCISWRRVWKSYWLYYDGQKLKEDSHKLKDYGLRNHDEVTFIKRLKEK 143
>gi|148227336|ref|NP_001083423.1| uncharacterized protein LOC398918 [Xenopus laevis]
gi|38014507|gb|AAH60402.1| MGC68520 protein [Xenopus laevis]
Length = 168
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 82/128 (64%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVS 71
+E + I L LP VT+EEI S++ L +GQ++ + ++++ V+ +N V
Sbjct: 41 QEGLAMIVQDPLLCDLPIQVTLEEINSQIALEYGQAMTVRVCKEDEEIMPVVVVQNATVL 100
Query: 72 DLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEIT 131
DLKR I+R I ++ +R+G + ISW++VW++Y LS+ G KL +E L E GI+++ E+
Sbjct: 101 DLKRAIQRYIQLKHQREGGIQHISWKYVWRTYHLSYSGEKLDDEAKSLREYGIKNRDEVV 160
Query: 132 FVKRLKDK 139
FVK+LK+K
Sbjct: 161 FVKKLKNK 168
>gi|62859759|ref|NP_001016702.1| uncharacterized protein LOC549456 [Xenopus (Silurana) tropicalis]
gi|60550970|gb|AAH91616.1| hypothetical protein LOC549456 [Xenopus (Silurana) tropicalis]
Length = 167
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 82/129 (63%), Gaps = 2/129 (1%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFDIVISPKNTRV 70
+E + I L LP VT+EEI S++ L +GQ++ + +AD + +V+ +N V
Sbjct: 40 QEGLAMIVQDPLLCDLPIQVTLEEINSQIALEYGQAMTVRVCKADGEIMPVVVV-QNATV 98
Query: 71 SDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEI 130
DLKR I+R I ++ +R+G + ISW++VW++Y LSF G KL + L E GI+++ E+
Sbjct: 99 LDLKRAIQRYIQLKHQREGGIQHISWKYVWRTYHLSFSGEKLEEDSRSLREYGIKNRDEV 158
Query: 131 TFVKRLKDK 139
FVK+LK+K
Sbjct: 159 VFVKKLKNK 167
>gi|344292082|ref|XP_003417757.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Loxodonta africana]
Length = 171
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 81/128 (63%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVS 71
+E + + L LP VT+EE+ S++ L +GQ++ C+ + + V+ +N V
Sbjct: 44 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVCVCKMDGEVMPVVVVQNATVL 103
Query: 72 DLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEIT 131
DLK+ I+R + ++ +R+G + ISW +VW++Y+L+F G KLT ++ L + GI ++ E++
Sbjct: 104 DLKKAIQRYVQLRQEREGGIQHISWSYVWRTYYLTFVGEKLTEDRKKLRDYGIRNRDEVS 163
Query: 132 FVKRLKDK 139
F+K+L+ K
Sbjct: 164 FIKKLRQK 171
>gi|226372070|gb|ACO51660.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Rana
catesbeiana]
Length = 123
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 76/116 (65%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITM 83
L LP VT+EEI S++ L GQ++ + +K ++ +N V DLKR I+R I +
Sbjct: 8 LCDLPIQVTLEEINSQIALEFGQAMTVNVCKADKDIMPIVVVQNATVLDLKRAIQRYIQL 67
Query: 84 QMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+ +R+G + +SW++VW++Y+L+F G KL ++ L E GI+++ E+ FVKRL++K
Sbjct: 68 KHQREGGIQHVSWKYVWRTYYLAFAGEKLDRDEKSLREYGIKNRDEVCFVKRLRNK 123
>gi|89268289|emb|CAJ82445.1| novel protein [Xenopus (Silurana) tropicalis]
Length = 175
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 82/129 (63%), Gaps = 2/129 (1%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFDIVISPKNTRV 70
+E + I L LP VT+EEI S++ L +GQ++ + +AD + +V+ +N V
Sbjct: 48 QEGLAMIVQDPLLCDLPIQVTLEEINSQIALEYGQAMTVRVCKADGEIMPVVVV-QNATV 106
Query: 71 SDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEI 130
DLKR I+R I ++ +R+G + ISW++VW++Y LSF G KL + L E GI+++ E+
Sbjct: 107 LDLKRAIQRYIQLKHQREGGIQHISWKYVWRTYHLSFSGEKLEEDSRSLREYGIKNRDEV 166
Query: 131 TFVKRLKDK 139
FVK+LK+K
Sbjct: 167 VFVKKLKNK 175
>gi|348509153|ref|XP_003442116.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Oreochromis niloticus]
Length = 187
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 82/129 (63%), Gaps = 2/129 (1%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMC-CIQADNKKFDIVISPKNTRV 70
+E + + L LP VT+EE+ S++ L +GQ++ ++AD++ IV+ +N V
Sbjct: 60 EEGLARLVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVLKADSEVMPIVVV-QNATV 118
Query: 71 SDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEI 130
DLK+ I R + ++ +R+G K ISWR+VW++Y L F G KL ++K L + GI ++ E+
Sbjct: 119 LDLKKAICRFMELKQQREGGVKHISWRYVWRTYHLVFQGEKLEDDKMRLKDYGIRNRDEV 178
Query: 131 TFVKRLKDK 139
TF+KRL+ K
Sbjct: 179 TFMKRLRKK 187
>gi|327289177|ref|XP_003229301.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Anolis carolinensis]
Length = 151
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 81/128 (63%), Gaps = 2/128 (1%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQ-ADNKKFDI-VISPKNTR 69
+E + + L LP VT EEI S++ L +GQ++ ++ AD + + V+ +N
Sbjct: 23 QEGLARLVRDPLLCDLPAQVTPEEISSQVALEYGQAMTVRVRRADAPEAPLPVVVVQNAS 82
Query: 70 VSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCE 129
V DLKR + R + ++ +R+G + ISWR++W++Y L+F G KLT+++ L E GI ++ E
Sbjct: 83 VLDLKRALRRFVQLRQEREGGIQHISWRYLWRTYCLTFGGEKLTDDRKKLREYGIRNRDE 142
Query: 130 ITFVKRLK 137
+TFVK+++
Sbjct: 143 VTFVKKIR 150
>gi|390333381|ref|XP_794255.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Strongylocentrotus purpuratus]
Length = 167
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 69/116 (59%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITM 83
L LP DV EE+ ++ L +GQ++ ++ V+ + V DLK I+R +
Sbjct: 48 LEDLPPDVCAEEVNLQIALEYGQAMTVIVRRAEGDVMPVVVMQTATVQDLKSAIKRYFEL 107
Query: 84 QMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+ R+ + K+ISWR+VW+SY+L F+G KLT++ + + GI ++ E+TF KRL K
Sbjct: 108 KQDREEIKKKISWRYVWRSYYLCFEGEKLTDDYKKIRDFGIRNRAEVTFAKRLHSK 163
>gi|390337966|ref|XP_001199326.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Strongylocentrotus purpuratus]
Length = 167
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 69/116 (59%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITM 83
L LP DV EE+ ++ L +GQ++ ++ V+ + V DLK I+R +
Sbjct: 48 LKDLPPDVCAEEVNLQIALEYGQAMTVIVRRAEGDVMPVVVMQTATVQDLKSAIKRYFEL 107
Query: 84 QMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+ R+ + K+ISWR+VW+SY+L F+G KLT++ + + GI ++ E+TF KRL K
Sbjct: 108 KQDREEIKKKISWRYVWRSYYLCFEGEKLTDDYKKIRDFGIRNRAEVTFAKRLHSK 163
>gi|47220063|emb|CAG12211.1| unnamed protein product [Tetraodon nigroviridis]
Length = 188
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Query: 6 QLLTETKEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMC-CIQADNKKFDIVIS 64
++L +E + + L LP VT+EE+ S++ L +GQ++ ++AD + IV+
Sbjct: 55 EILDIFEEGLAQLVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVLKADGEVMPIVVV 114
Query: 65 PKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGI 124
+N V DLK+ I R + ++ +R+G K +SWR+VW++Y L F G KL +++ L + GI
Sbjct: 115 -QNATVLDLKKAIRRFMELKQQREGGVKYVSWRYVWRTYHLVFQGEKLEDDRMRLKDYGI 173
Query: 125 ESQCEITFVKRLKDK 139
+++ E+TF+K+L+ K
Sbjct: 174 KNRDEVTFMKKLRKK 188
>gi|213510978|ref|NP_001134941.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Salmo
salar]
gi|209737428|gb|ACI69583.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Salmo
salar]
Length = 188
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFDIVISPKNTRV 70
+E + + L LP VT+EE+ S++ L +GQ++ + +AD + IV+ +N V
Sbjct: 61 EEGLARLVQDPLLCDLPIQVTLEEVNSQVALEYGQAMTVRVCKADGEVMPIVVV-QNAMV 119
Query: 71 SDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEI 130
DLK+ I+R + ++ +R G K +SWR+VW+++ L F G KL ++K L + GI ++ E+
Sbjct: 120 LDLKKAIQRFMELKQQRVGGVKHVSWRYVWRTFHLVFQGEKLDDDKMKLKDYGIRNRDEV 179
Query: 131 TFVKRLKDK 139
TF+KRL+ K
Sbjct: 180 TFMKRLRKK 188
>gi|357604352|gb|EHJ64146.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Danaus
plexippus]
Length = 150
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 5 DQLLTETKEAIKNI-RTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVI 63
D++L TK + + ++ + LS LP D+ +EEI S+ + HGQSI + ++++ VI
Sbjct: 14 DEVLEITKSLLSTLFKSDSLLSDLPSDIILEEILSQTAVEHGQSITVIVSREDEQPLKVI 73
Query: 64 SPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELG 123
P+N+ V +LK+ + R + +R G +ISWR++WK+Y L++D + L + S +++ G
Sbjct: 74 VPQNSTVRELKKAVARHFELYQQRMGNRVKISWRYIWKTYSLNYDSLTLDKDDSKITDYG 133
Query: 124 IESQCEITFVKRLKDKVR 141
+ ++ +TF K+++ K R
Sbjct: 134 VTNKVILTF-KKIRRKPR 150
>gi|363739485|ref|XP_423619.3| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Gallus gallus]
Length = 200
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 78/125 (62%), Gaps = 2/125 (1%)
Query: 14 AIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFDIVISPKNTRVSD 72
A+ + L LP VT EEI S++ L +GQ++ + +AD + +V+ +N V D
Sbjct: 76 ALARLVQDPLLCDLPPQVTPEEIGSQVALEYGQAMTVRVCKADGESMPVVVV-QNASVLD 134
Query: 73 LKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITF 132
LK+ + R + ++ R+G + +SW+++W++Y L++ G KL +++ L E GI ++ E++F
Sbjct: 135 LKKALRRHVQLRQARRGGVQHLSWKYIWRTYHLTYAGEKLADDRKKLREYGIRNRDEVSF 194
Query: 133 VKRLK 137
+K+L+
Sbjct: 195 IKKLR 199
>gi|405977277|gb|EKC41736.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Crassostrea
gigas]
Length = 171
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 18 IRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQ-ADNKKFDIVISPKNTRVSDLKRT 76
+ T + L LP +VT+EE+ S + L HGQ+++ +Q AD + +V+ +N V DLK
Sbjct: 68 VSTDSLLYDLPPEVTLEEVNSFIALEHGQAMLVNVQRADGEVLSVVVV-QNGTVLDLKHA 126
Query: 77 IERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSE 121
I+R +T+++ R K ISW+++WK YWL F+G KLT +K L E
Sbjct: 127 IKRHMTLKLSRSKGKKHISWKYIWKRYWLYFEGQKLTEDKKQLKE 171
>gi|126335357|ref|XP_001371960.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Monodelphis domestica]
Length = 175
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 78/128 (60%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVS 71
+E + I L LP VT+EEI S++ L +GQ++ + + + V+ +N
Sbjct: 48 QEGLAMIVQDPLLCDLPIQVTLEEINSQIALEYGQAMTVRVCKVDGEVMPVVVVQNATTL 107
Query: 72 DLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEIT 131
DLK+ I+R + ++ +R+G + ISW ++W++Y L+F G KLT + L E GI ++ E++
Sbjct: 108 DLKKAIQRYVQLKQEREGGIQHISWSYIWRTYHLTFAGEKLTEDGKKLREYGIRNRDEVS 167
Query: 132 FVKRLKDK 139
F+K+L++K
Sbjct: 168 FIKKLRNK 175
>gi|432868044|ref|XP_004071383.1| PREDICTED: LOW QUALITY PROTEIN: U11/U12 small nuclear
ribonucleoprotein 25 kDa protein-like [Oryzias latipes]
Length = 180
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 83/136 (61%), Gaps = 4/136 (2%)
Query: 6 QLLTETKEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMC--CIQADNKKFDIVI 63
++L +E + + L LP VT+EE+ S++ L +GQ++ C +AD + IV+
Sbjct: 47 EILDIFEEGLARLVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVKXC-KADGEIMPIVV 105
Query: 64 SPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELG 123
+N V DLK+ I R + ++ +R+G K +SWR+VW++Y+L F G KL ++ L + G
Sbjct: 106 V-QNATVLDLKKAIRRFMELKQQREGGVKHVSWRYVWRTYYLVFQGEKLEDDSIRLKDYG 164
Query: 124 IESQCEITFVKRLKDK 139
I ++ E+ F+K+L+ K
Sbjct: 165 IRNRDEVMFMKKLRKK 180
>gi|410902817|ref|XP_003964890.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Takifugu rubripes]
Length = 183
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Query: 6 QLLTETKEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMC-CIQADNKKFDIVIS 64
++L +E + + L LP VT+EE+ S++ L +GQ++ ++AD + IV+
Sbjct: 50 EILDIFEEGLAQLVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVKVLKADGEVMPIVVV 109
Query: 65 PKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGI 124
+N V DLK+ I R + ++ +R+G K +SWR+VW+++ L F G KL +++ L + GI
Sbjct: 110 -QNATVLDLKKAIRRFMELKQQREGGVKCVSWRYVWRTFNLVFQGEKLEDDRMRLRDYGI 168
Query: 125 ESQCEITFVKRLKDK 139
+++ E+TF+K+L+ K
Sbjct: 169 KNRDEVTFMKKLRKK 183
>gi|410985647|ref|XP_003999130.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Felis catus]
Length = 180
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 79/128 (61%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVS 71
+E + + L LP VT+EE+ S++ L +GQ++ + + + V+ +N V
Sbjct: 53 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEIMPVVVVQNATVL 112
Query: 72 DLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEIT 131
DLK+ I+R + ++ +R+G + ISW +VW++Y+L+ G KLT ++ L + GI ++ E++
Sbjct: 113 DLKKAIQRYVQLRQEREGGIQHISWSYVWRTYYLTSAGEKLTEDRKKLRDYGIRNRDEVS 172
Query: 132 FVKRLKDK 139
F+K+L+ K
Sbjct: 173 FIKKLRQK 180
>gi|301769555|ref|XP_002920234.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Ailuropoda melanoleuca]
Length = 204
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 79/128 (61%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVS 71
+E + + L LP VT+EE+ S++ L +GQ++ + + + V+ +N V
Sbjct: 77 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEIMPVVVVQNATVL 136
Query: 72 DLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEIT 131
DLK+ I+R + ++ +R+G + ISW +VW++Y+L+ G KLT ++ L + GI ++ E++
Sbjct: 137 DLKKAIQRYVQLRQEREGGIQHISWSYVWRTYYLTSAGEKLTEDRKKLRDYGIRNRDEVS 196
Query: 132 FVKRLKDK 139
F+K+L+ K
Sbjct: 197 FIKKLRQK 204
>gi|355721010|gb|AES07123.1| small nuclear ribonucleoprotein 25kDa [Mustela putorius furo]
Length = 157
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 79/126 (62%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVS 71
+E + + L LP VT+EE+ S++ L +GQ++ + + + V+ +N V
Sbjct: 31 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEIMPVVVVQNATVL 90
Query: 72 DLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEIT 131
DLK+ I+R + ++ +R+G + ISW +VW++Y+L+ G KLT+++ L + GI ++ E++
Sbjct: 91 DLKKAIQRYVQLRQEREGGIQHISWSYVWRTYYLTSAGEKLTDDRKKLRDYGIRNRDEVS 150
Query: 132 FVKRLK 137
F+K+L+
Sbjct: 151 FIKKLR 156
>gi|73959877|ref|XP_854401.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Canis lupus familiaris]
Length = 213
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 79/128 (61%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVS 71
+E + + L LP VT+EE+ S++ L +GQ++ + + + V+ +N V
Sbjct: 86 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEIMPVVVVQNATVL 145
Query: 72 DLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEIT 131
DLK+ I+R + ++ +R+G + ISW +VW++Y+L+ G KLT ++ L + GI ++ E++
Sbjct: 146 DLKKAIQRYVQLRQEREGGIQHISWSYVWRTYYLTSAGEKLTEDRKKLRDYGIRNRDEVS 205
Query: 132 FVKRLKDK 139
F+K+L+ K
Sbjct: 206 FIKKLRQK 213
>gi|291415424|ref|XP_002723952.1| PREDICTED: chromosome 16 open reading frame 33-like, partial
[Oryctolagus cuniculus]
Length = 174
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 78/128 (60%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVS 71
+E + + L LP VT+EEI S++ L +GQ++ + + + V+ +N V
Sbjct: 47 QEGLAMVVQDPLLCDLPIQVTLEEINSQIALEYGQAMTVRVSKMDGEVMPVVVVQNATVL 106
Query: 72 DLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEIT 131
DLK+ I+R + ++ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E++
Sbjct: 107 DLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVS 166
Query: 132 FVKRLKDK 139
F+K+L+ K
Sbjct: 167 FIKKLRQK 174
>gi|18463966|gb|AAL73047.1| C16ORF33 [Sphoeroides nephelus]
Length = 109
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 74/110 (67%), Gaps = 2/110 (1%)
Query: 31 VTVEEIKSEMELLHGQSIMC-CIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKG 89
VT+EE+ S++ L +GQ++ ++AD + IV+ +N V DLK+ I R + ++ +R+G
Sbjct: 1 VTLEEVNSQIALEYGQAMTVRVLKADGEVMPIVVV-QNATVLDLKKAIRRFMELKQQREG 59
Query: 90 LSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
K +SWR+VW++Y L F G KL ++ L + GI+++ E+TF+K+L+ K
Sbjct: 60 GVKYVSWRYVWRTYHLVFQGEKLEGDRMRLKDYGIKNRDEVTFMKKLRKK 109
>gi|148691819|gb|EDL23766.1| RIKEN cDNA 3300001G02, isoform CRA_c [Mus musculus]
Length = 123
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 74/116 (63%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITM 83
L LP VT+EE+ S++ L +GQ++ + + + V+ +N V DLK+ I+R + +
Sbjct: 8 LCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVTAVVVVQNATVLDLKKAIQRYVQL 67
Query: 84 QMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E++F+K+L+ K
Sbjct: 68 KQEREGGVQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFIKKLRQK 123
>gi|149496551|ref|XP_001514542.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like, partial [Ornithorhynchus anatinus]
Length = 109
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%)
Query: 31 VTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGL 90
VT+EEI S++ L +GQ++ + +++ V+ +N V DLK+ I+R + ++ +R+G
Sbjct: 1 VTLEEINSQIALEYGQAMTVRVCKVDEEVIPVVVVQNATVLDLKKAIQRSVQLRQEREGG 60
Query: 91 SKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
++ ISW +VW++Y L+F G KLT + L E GI ++ ++TF K+L++K
Sbjct: 61 TQHISWSYVWRTYHLTFAGEKLTEDGKKLREYGIRNRDQVTFSKKLRNK 109
>gi|62955357|ref|NP_001017690.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Danio
rerio]
gi|62204893|gb|AAH93151.1| Zgc:112000 [Danio rerio]
Length = 173
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Query: 6 QLLTETKEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFDIVIS 64
++L +E + I L LP VT+EE+ S++ L +GQ++ + +AD + IV+
Sbjct: 40 EILDIFEEGLALIVQDPLLCDLPIQVTLEEVNSQVALEYGQAMTVRVCKADGEVMPIVVV 99
Query: 65 PKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGI 124
T V DLK+ I R + ++ +R+G K +SW++VW+++ L F+G KL +++ L + G+
Sbjct: 100 QSAT-VLDLKKAIRRYMELKQQREGGVKHVSWKYVWRTFHLVFNGEKLEDDRRKLKDYGV 158
Query: 125 ESQCEITFVKRLKDK 139
++ E+TF K+L+ K
Sbjct: 159 RNRDEVTFSKKLRKK 173
>gi|335284777|ref|XP_003124710.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like, partial [Sus scrofa]
Length = 134
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 77/130 (59%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTR 69
E E + + L LP VT+EE+ S++ L +GQ++ + + + V+ +N
Sbjct: 5 EFSEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKTDGEVMPVVVVQNAT 64
Query: 70 VSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCE 129
V DLK+ I+R + ++ +R+G + ISW +VW++Y L G KLT ++ L + GI ++ E
Sbjct: 65 VLDLKKAIQRYVQLRQEREGGVQHISWSYVWRTYHLMAAGEKLTEDRKKLRDYGIRNRDE 124
Query: 130 ITFVKRLKDK 139
++F+K+L+ K
Sbjct: 125 VSFIKKLRQK 134
>gi|321459551|gb|EFX70603.1| hypothetical protein DAPPUDRAFT_231603 [Daphnia pulex]
Length = 207
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Query: 18 IRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTI 77
+ T L+ LP VT++E++S + L HGQ+I I ++ VI +N V LKR +
Sbjct: 84 LATDPILNDLPSAVTLDEVQSLIALEHGQAIHVEIHREDGTSLPVIIRQNATVGQLKRAV 143
Query: 78 ERQITMQMKRKGLSKQ--ISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKR 135
ER + + R +Q I+W++VWK+YWL G KL ++ + + + + + ++F+KR
Sbjct: 144 ERATELSLSRDANQRQRRINWKYVWKTYWLYAHGAKLKDDMATIKDCALSNGDGVSFIKR 203
Query: 136 LKDK 139
LK+K
Sbjct: 204 LKEK 207
>gi|432098907|gb|ELK28397.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Myotis
davidii]
Length = 123
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 75/116 (64%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITM 83
L LP VT+EE+ S++ L +GQ++ + + + V+ +N V DLK+ I+R + +
Sbjct: 8 LCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQL 67
Query: 84 QMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+ +R+G + ISW +VW++Y L+ G KLT+++ L + GI ++ E++F+K+L+ K
Sbjct: 68 RQEREGGIQHISWSYVWRTYHLTSAGEKLTDDRKKLRDYGIRNRDEVSFIKKLRQK 123
>gi|392351107|ref|XP_213260.4| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Rattus norvegicus]
Length = 182
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 78/128 (60%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVS 71
+E + + L LP VT+EE+ S++ L +GQ++ + + + V+ +N V
Sbjct: 55 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVL 114
Query: 72 DLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEIT 131
DLK+ I+R + ++ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E++
Sbjct: 115 DLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVS 174
Query: 132 FVKRLKDK 139
F+K+L+ K
Sbjct: 175 FIKKLRQK 182
>gi|348584706|ref|XP_003478113.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Cavia porcellus]
Length = 156
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 78/128 (60%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVS 71
+E + + L LP VT+EE+ S++ L +GQ++ + + + V+ +N V
Sbjct: 29 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVL 88
Query: 72 DLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEIT 131
DLK+ I+R + ++ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E++
Sbjct: 89 DLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVS 148
Query: 132 FVKRLKDK 139
F+K+L+ K
Sbjct: 149 FIKKLRQK 156
>gi|417408430|gb|JAA50766.1| Hypothetical protein, partial [Desmodus rotundus]
Length = 183
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 78/128 (60%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVS 71
+E + + L LP VT+EE+ S++ L +GQ++ + + + V+ +N V
Sbjct: 56 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVL 115
Query: 72 DLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEIT 131
DLK+ I+R + ++ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E++
Sbjct: 116 DLKKAIQRYVQLRQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVS 175
Query: 132 FVKRLKDK 139
F+K+L+ K
Sbjct: 176 FIKKLRQK 183
>gi|392332036|ref|XP_001062061.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Rattus norvegicus]
Length = 237
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 78/128 (60%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVS 71
+E + + L LP VT+EE+ S++ L +GQ++ + + + V+ +N V
Sbjct: 110 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVL 169
Query: 72 DLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEIT 131
DLK+ I+R + ++ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E++
Sbjct: 170 DLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVS 229
Query: 132 FVKRLKDK 139
F+K+L+ K
Sbjct: 230 FIKKLRQK 237
>gi|355756392|gb|EHH60000.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Macaca
fascicularis]
Length = 132
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 79/129 (61%), Gaps = 2/129 (1%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFDIVISPKNTRV 70
+E + + L LP VT+EE+ S++ L +GQ++ + + D + +V+ T V
Sbjct: 5 QEGLAMVVQDPLLGDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSAT-V 63
Query: 71 SDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEI 130
DLK+ I+R + ++ +R+G + ISW +VW++Y L+ G KLT +K L + GI ++ E+
Sbjct: 64 LDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDKKKLRDYGIRNRDEV 123
Query: 131 TFVKRLKDK 139
+F+K+L+ K
Sbjct: 124 SFIKKLRQK 132
>gi|351711231|gb|EHB14150.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Heterocephalus glaber]
Length = 169
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 78/128 (60%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVS 71
+E + + L LP VT+EE+ S++ L +GQ++ + + + V+ +N V
Sbjct: 42 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVL 101
Query: 72 DLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEIT 131
DLK+ I+R + ++ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E++
Sbjct: 102 DLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVS 161
Query: 132 FVKRLKDK 139
F+K+L+ K
Sbjct: 162 FIKKLRQK 169
>gi|262118251|ref|NP_084369.2| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Mus
musculus]
gi|395835627|ref|XP_003790778.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Otolemur garnettii]
gi|68052366|sp|Q8VIK1.1|CP033_MOUSE RecName: Full=U11/U12 small nuclear ribonucleoprotein 25 kDa
protein; Short=U11/U12 snRNP 25 kDa protein
gi|16973675|gb|AAL32366.1| C16ORF33 [Mus musculus]
gi|20380350|gb|AAH28766.1| Small nuclear ribonucleoprotein 25 (U11/U12) [Mus musculus]
gi|148691820|gb|EDL23767.1| RIKEN cDNA 3300001G02, isoform CRA_d [Mus musculus]
gi|149052203|gb|EDM04020.1| similar to chromosome 16 open reading frame 33; minus -99 protein
(predicted), isoform CRA_b [Rattus norvegicus]
gi|195977134|gb|ACG63681.1| U11/U12 small nuclear ribonucleoprotein protein (predicted)
[Otolemur garnettii]
Length = 123
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 74/116 (63%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITM 83
L LP VT+EE+ S++ L +GQ++ + + + V+ +N V DLK+ I+R + +
Sbjct: 8 LCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQL 67
Query: 84 QMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E++F+K+L+ K
Sbjct: 68 KQEREGGVQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFIKKLRQK 123
>gi|73586763|gb|AAI03172.1| SNRNP25 protein [Bos taurus]
Length = 166
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 80/129 (62%), Gaps = 2/129 (1%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFDIVISPKNTRV 70
+E + + L LP VT+EE+ S++ L +GQ++ + + D + +V+ +N V
Sbjct: 39 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVV-QNATV 97
Query: 71 SDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEI 130
DLK+ I+R + ++ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E+
Sbjct: 98 LDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEV 157
Query: 131 TFVKRLKDK 139
+F+K+L+ K
Sbjct: 158 SFIKKLRQK 166
>gi|338713072|ref|XP_001496673.3| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Equus caballus]
Length = 208
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 78/128 (60%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVS 71
+E + + L LP VT+EE+ S++ L +GQ++ + + + V+ +N V
Sbjct: 81 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVL 140
Query: 72 DLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEIT 131
DLK+ I+R + ++ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E++
Sbjct: 141 DLKKAIQRYVQLRQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVS 200
Query: 132 FVKRLKDK 139
F+K+L+ K
Sbjct: 201 FIKKLRQK 208
>gi|395853139|ref|XP_003799074.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Otolemur garnettii]
Length = 194
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 77/128 (60%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVS 71
+E + + L LP VT+EE+ S++ L +GQ++ + + + V+ +N V
Sbjct: 67 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVL 126
Query: 72 DLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEIT 131
DLK+ I+R + ++ +R+G + ISW +VW++Y L+ G LT ++ L + GI ++ E++
Sbjct: 127 DLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHLTSAGEMLTEDRKKLRDYGIRNRAEVS 186
Query: 132 FVKRLKDK 139
F+K+L+ K
Sbjct: 187 FIKKLRQK 194
>gi|226822865|gb|ACO83097.1| U11/U12 snRNP 25K protein (predicted) [Dasypus novemcinctus]
Length = 123
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 74/116 (63%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITM 83
L LP VT+EE+ S++ L +GQ++ + + + V+ +N V DLK+ I+R + +
Sbjct: 8 LCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQL 67
Query: 84 QMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E++F+K+L+ K
Sbjct: 68 KQEREGGIQHISWAYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFIKKLRQK 123
>gi|262205517|ref|NP_001160084.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Bos taurus]
gi|160017307|sp|Q3ZBQ4.2|CP033_BOVIN RecName: Full=U11/U12 small nuclear ribonucleoprotein 25 kDa
protein; Short=U11/U12 snRNP 25 kDa protein
gi|296473635|tpg|DAA15750.1| TPA: U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Bos
taurus]
gi|431906773|gb|ELK10894.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Pteropus
alecto]
Length = 123
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 74/116 (63%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITM 83
L LP VT+EE+ S++ L +GQ++ + + + V+ +N V DLK+ I+R + +
Sbjct: 8 LCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQL 67
Query: 84 QMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E++F+K+L+ K
Sbjct: 68 RQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFIKKLRQK 123
>gi|183396439|gb|ACC62114.1| U11/U12 snRNP protein (predicted) [Rhinolophus ferrumequinum]
Length = 123
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 74/116 (63%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITM 83
L LP VT+EE+ S++ L +GQ++ + + + V+ +N V DLK+ I+R + +
Sbjct: 8 LCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQL 67
Query: 84 QMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E++F+K+L+ K
Sbjct: 68 RQEREGGIQHISWPYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFIKKLRQK 123
>gi|440913470|gb|ELR62920.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein, partial
[Bos grunniens mutus]
Length = 199
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 80/129 (62%), Gaps = 2/129 (1%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFDIVISPKNTRV 70
+E + + L LP VT+EE+ S++ L +GQ++ + + D + +V+ +N V
Sbjct: 72 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVV-QNATV 130
Query: 71 SDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEI 130
DLK+ I+R + ++ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E+
Sbjct: 131 LDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEV 190
Query: 131 TFVKRLKDK 139
+F+K+L+ K
Sbjct: 191 SFIKKLRQK 199
>gi|339522115|gb|AEJ84222.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Capra
hircus]
Length = 123
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 74/116 (63%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITM 83
L LP VT+EE+ S++ L +GQ++ + + + V+ +N V DLK+ I+R + +
Sbjct: 8 LCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQL 67
Query: 84 QMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E++F+K+L+ K
Sbjct: 68 RREREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFIKKLRQK 123
>gi|354499600|ref|XP_003511896.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Cricetulus griseus]
Length = 169
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 78/128 (60%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVS 71
+E + + L LP VT+EE+ S++ L +GQ++ + + + V+ +N V
Sbjct: 42 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVL 101
Query: 72 DLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEIT 131
DLK+ I+R + ++ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E++
Sbjct: 102 DLKKAIQRYMQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVS 161
Query: 132 FVKRLKDK 139
F+K+L+ K
Sbjct: 162 FIKKLRQK 169
>gi|426254135|ref|XP_004020740.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Ovis aries]
Length = 123
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 74/116 (63%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITM 83
L LP VT+EE+ S++ L +GQ++ + + + V+ +N V DLK+ I+R + +
Sbjct: 8 LCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQL 67
Query: 84 QMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E++F+K+L+ K
Sbjct: 68 RQEREGGIQHISWSYVWRTYHLTSAGEKLTEDQKKLRDYGIRNRDEVSFIKKLRQK 123
>gi|12859665|dbj|BAB31728.1| unnamed protein product [Mus musculus]
Length = 123
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 73/116 (62%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITM 83
L LP VT+EE+ S++ L +GQ++ + + + V+ +N V DLK+ I+R + +
Sbjct: 8 LCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQL 67
Query: 84 QMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E++F+K+L K
Sbjct: 68 KQEREGGVQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFIKKLGQK 123
>gi|281183133|ref|NP_001162284.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Papio
anubis]
gi|160904111|gb|ABX52098.1| chromosome 16 open reading frame 33 (predicted) [Papio anubis]
gi|355709782|gb|EHH31246.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Macaca
mulatta]
gi|380787573|gb|AFE65662.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Macaca
mulatta]
gi|383421593|gb|AFH34010.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Macaca
mulatta]
gi|384949440|gb|AFI38325.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Macaca
mulatta]
Length = 132
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 78/128 (60%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVS 71
+E + + L LP VT+EE+ S++ L +GQ++ + + + V+ ++ V
Sbjct: 5 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSATVL 64
Query: 72 DLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEIT 131
DLK+ I+R + ++ +R+G + ISW +VW++Y L+ G KLT +K L + GI ++ E++
Sbjct: 65 DLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDKKKLRDYGIRNRDEVS 124
Query: 132 FVKRLKDK 139
F+K+L+ K
Sbjct: 125 FIKKLRQK 132
>gi|344254276|gb|EGW10380.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Cricetulus
griseus]
Length = 123
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 74/116 (63%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITM 83
L LP VT+EE+ S++ L +GQ++ + + + V+ +N V DLK+ I+R + +
Sbjct: 8 LCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYMQL 67
Query: 84 QMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E++F+K+L+ K
Sbjct: 68 KQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFIKKLRQK 123
>gi|395515604|ref|XP_003761991.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Sarcophilus harrisii]
Length = 168
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 71/109 (65%)
Query: 31 VTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGL 90
VT+EEI S++ L +GQ++ + + + V+ +N DLK+ I+R + ++ +R+G
Sbjct: 60 VTLEEINSQIALEYGQAMTVRVCKVDGEVMPVVVVQNATTLDLKKAIQRYVQLKQEREGG 119
Query: 91 SKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+ ISW ++W++Y L+F G KLT + L E GI ++ E++F+K+L++K
Sbjct: 120 IQHISWSYIWRTYHLTFAGEKLTEDAKKLREYGIRNRDEVSFIKKLRNK 168
>gi|13443018|ref|NP_078847.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Homo
sapiens]
gi|114660086|ref|XP_523242.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
isoform 3 [Pan troglodytes]
gi|395747207|ref|XP_003778569.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
isoform 1 [Pongo abelii]
gi|395747209|ref|XP_003778570.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
isoform 2 [Pongo abelii]
gi|397476070|ref|XP_003809434.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Pan paniscus]
gi|426380497|ref|XP_004056899.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Gorilla gorilla gorilla]
gi|426380503|ref|XP_004056902.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like isoform 1 [Gorilla gorilla gorilla]
gi|426380505|ref|XP_004056903.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like isoform 2 [Gorilla gorilla gorilla]
gi|68052377|sp|Q9BV90.1|CP033_HUMAN RecName: Full=U11/U12 small nuclear ribonucleoprotein 25 kDa
protein; Short=U11/U12 snRNP 25 kDa protein;
Short=U11/U12-25K; AltName: Full=Minus-99 protein
gi|14336677|gb|AAK61211.1|AE006462_3 Minus -99 protein [Homo sapiens]
gi|12655063|gb|AAH01381.1| Small nuclear ribonucleoprotein 25kDa (U11/U12) [Homo sapiens]
gi|14327922|gb|AAH09179.1| Small nuclear ribonucleoprotein 25kDa (U11/U12) [Homo sapiens]
gi|90653003|gb|ABD95904.1| U11/U12 snRNP 25 kDa protein [Homo sapiens]
gi|123982628|gb|ABM83055.1| chromosome 16 open reading frame 33 [synthetic construct]
gi|123983044|gb|ABM83263.1| chromosome 16 open reading frame 33 [synthetic construct]
gi|123997293|gb|ABM86248.1| chromosome 16 open reading frame 33 [synthetic construct]
gi|410222032|gb|JAA08235.1| small nuclear ribonucleoprotein 25kDa (U11/U12) [Pan troglodytes]
gi|410248962|gb|JAA12448.1| small nuclear ribonucleoprotein 25kDa (U11/U12) [Pan troglodytes]
gi|410304654|gb|JAA30927.1| small nuclear ribonucleoprotein 25kDa (U11/U12) [Pan troglodytes]
Length = 132
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 78/128 (60%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVS 71
+E + + L LP VT+EE+ S++ L +GQ++ + + + V+ ++ V
Sbjct: 5 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSATVL 64
Query: 72 DLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEIT 131
DLK+ I+R + ++ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E++
Sbjct: 65 DLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVS 124
Query: 132 FVKRLKDK 139
F+K+L+ K
Sbjct: 125 FIKKLRQK 132
>gi|390471020|ref|XP_003734415.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Callithrix jacchus]
Length = 182
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 79/129 (61%), Gaps = 2/129 (1%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFDIVISPKNTRV 70
+E + + L LP VT+EE+ S++ L +GQ++ + + D + +V+ T V
Sbjct: 55 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSAT-V 113
Query: 71 SDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEI 130
DLK+ I+R + ++ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E+
Sbjct: 114 LDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEV 173
Query: 131 TFVKRLKDK 139
+F+K+L+ K
Sbjct: 174 SFIKKLRQK 182
>gi|297283095|ref|XP_001082002.2| PREDICTED: hypothetical protein LOC693295 [Macaca mulatta]
Length = 266
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 80/129 (62%), Gaps = 2/129 (1%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFDIVISPKNTRV 70
+E + + L LP VT+EE+ S++ L +GQ++ + + D + +V+ ++ V
Sbjct: 139 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVV-QSATV 197
Query: 71 SDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEI 130
DLK+ I+R + ++ +R+G + ISW +VW++Y L+ G KLT +K L + GI ++ E+
Sbjct: 198 LDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDKKKLRDYGIRNRDEV 257
Query: 131 TFVKRLKDK 139
+F+K+L+ K
Sbjct: 258 SFIKKLRQK 266
>gi|48427640|tpg|DAA05499.1| TPA_exp: U11/U12 snRNP 25K [Homo sapiens]
gi|123237049|emb|CAI95606.2| chromosome 16 open reading frame 33 [Homo sapiens]
gi|167427356|gb|ABZ80331.1| U11/U12 snRNP 25K protein (predicted) [Callithrix jacchus]
gi|169246091|gb|ACA51067.1| U11/U12 snRNP protein (predicted) [Callicebus moloch]
Length = 123
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 74/116 (63%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITM 83
L LP VT+EE+ S++ L +GQ++ + + + V+ ++ V DLK+ I+R + +
Sbjct: 8 LCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSATVLDLKKAIQRYVQL 67
Query: 84 QMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E++F+K+L+ K
Sbjct: 68 KQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFIKKLRQK 123
>gi|403273560|ref|XP_003928576.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein,
partial [Saimiri boliviensis boliviensis]
Length = 200
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 80/129 (62%), Gaps = 2/129 (1%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFDIVISPKNTRV 70
+E + + L LP VT+EE+ S++ L +GQ++ + + D + +V+ ++ V
Sbjct: 73 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVV-QSATV 131
Query: 71 SDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEI 130
DLK+ I+R + ++ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E+
Sbjct: 132 LDLKKAIQRYMQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEV 191
Query: 131 TFVKRLKDK 139
+F+K+L+ K
Sbjct: 192 SFIKKLRQK 200
>gi|10439480|dbj|BAB15505.1| unnamed protein product [Homo sapiens]
Length = 132
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 77/128 (60%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVS 71
+E + + L LP VT+EE+ S++ L +GQ++ + + + V+ ++ V
Sbjct: 5 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSATVL 64
Query: 72 DLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEIT 131
DLK+ I+R + ++ +R+G + ISW +VW++Y L+ G KL ++ L + GI ++ E++
Sbjct: 65 DLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLAEDRKKLRDYGIRNRDEVS 124
Query: 132 FVKRLKDK 139
F+K+L+ K
Sbjct: 125 FIKKLRQK 132
>gi|119606283|gb|EAW85877.1| chromosome 16 open reading frame 33, isoform CRA_a [Homo sapiens]
Length = 267
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 80/129 (62%), Gaps = 2/129 (1%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFDIVISPKNTRV 70
+E + + L LP VT+EE+ S++ L +GQ++ + + D + +V+ ++ V
Sbjct: 140 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVV-QSATV 198
Query: 71 SDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEI 130
DLK+ I+R + ++ +R+G + ISW +VW++Y L+ G KLT ++ L + GI ++ E+
Sbjct: 199 LDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEV 258
Query: 131 TFVKRLKDK 139
+F+K+L+ K
Sbjct: 259 SFIKKLRQK 267
>gi|335308396|ref|XP_003361215.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like, partial [Sus scrofa]
Length = 109
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 70/109 (64%)
Query: 31 VTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGL 90
VT+EE+ S++ L +GQ++ + + + V+ +N V DLK+ I+R + ++ +R+G
Sbjct: 1 VTLEEVNSQIALEYGQAMTVRVCKTDGEVMPVVVVQNATVLDLKKAIQRYVQLRQEREGG 60
Query: 91 SKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+ ISW +VW++Y L G KLT ++ L + GI ++ E++F+K+L+ K
Sbjct: 61 VQHISWSYVWRTYHLMAAGEKLTEDRKKLRDYGIRNRDEVSFIKKLRQK 109
>gi|242004550|ref|XP_002423145.1| U11/U12 snRNP 25 kDa protein, putative [Pediculus humanus corporis]
gi|212506102|gb|EEB10407.1| U11/U12 snRNP 25 kDa protein, putative [Pediculus humanus corporis]
Length = 152
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 80/129 (62%), Gaps = 6/129 (4%)
Query: 5 DQLLTETKEAIKNIRTQNT-LSHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFDIV 62
+QL+ T A+ + TQ++ L+ LP VT+EE+ +++ L HG+SI I + D +K I+
Sbjct: 17 EQLMQITNTALNELLTQDSFLNDLPNGVTLEEVNNQIALQHGKSITINILREDKEKMPII 76
Query: 63 ISPKNTRVSDLKRTIERQITMQMKR----KGLSKQISWRHVWKSYWLSFDGIKLTNEKSL 118
+S V+DLK++I + IT+++KR K K ISW+++WK+Y+L L +
Sbjct: 77 VSQAEGTVADLKKSIRKYITLKLKRSKKTKMRHKLISWKYIWKTYFLKHSDKILKDNNVK 136
Query: 119 LSELGIESQ 127
L ++GI+++
Sbjct: 137 LKDIGIKNK 145
>gi|449674293|ref|XP_002156888.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Hydra magnipapillata]
Length = 154
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 74/130 (56%), Gaps = 3/130 (2%)
Query: 11 TKEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQ-ADNKKFDIV--ISPKN 67
T E ++ + L LP DVT +++K+++ L G++ + ++ A F+ + I
Sbjct: 23 TNELLQKLLNDALLKDLPNDVTSKDLKAKIALEKGRAFIVYLKRATETGFEDIPLIVDHK 82
Query: 68 TRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQ 127
T++ DLK ++R ++ ++K + + +SW++ WK+YWL + KLT+ + GI+
Sbjct: 83 TKLIDLKLNVQRTLSRKIKEEKGTSCLSWKYFWKTYWLVHNNEKLTDGSKTMKAYGIKEN 142
Query: 128 CEITFVKRLK 137
EI FVKRL+
Sbjct: 143 AEIMFVKRLR 152
>gi|284444059|gb|ADB85768.1| hypothetical protein [Wolffia arrhiza]
Length = 164
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 9/140 (6%)
Query: 8 LTETKEA-----IKNIRTQNTLSHLPQDVTVEEIKSEMEL-LHGQSIMCCIQADNKKFDI 61
L+E K A +K + + LS +P T+ ++ + + L G + ++ D FD+
Sbjct: 3 LSEGKRAGLESMVKALLSDPLLSDVPARPTLSDVDTLLRFELGGAMKISVLKLDGSSFDV 62
Query: 62 VISPKNTRVSDLKRTIERQI-TMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLS 120
V+S + V DLK I ++I MQ + G + ISWRHVW ++ LS D KL + S L
Sbjct: 63 VVS-NSASVKDLKLAIRKKIEAMQEGQMG-HRHISWRHVWANFCLSHDNEKLIEDDSSLQ 120
Query: 121 ELGIESQCEITFVKRLKDKV 140
+ GI S ++ FV ++ +V
Sbjct: 121 KFGIHSNSQVRFVAYVQSRV 140
>gi|444727238|gb|ELW67739.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Tupaia
chinensis]
Length = 131
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 61/98 (62%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITM 83
L LP VT+EE+ S++ L +GQ++ + + + V+ +N V DLK+ I+R + +
Sbjct: 8 LCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRHVQL 67
Query: 84 QMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSE 121
+ +R+G ++ ISW +VW++Y L+ G KLT ++ L E
Sbjct: 68 KQEREGGTQHISWSYVWRTYHLTSAGEKLTEDRKKLRE 105
>gi|340371622|ref|XP_003384344.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Amphimedon queenslandica]
Length = 143
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
Query: 7 LLTETKEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQA-DNKKFDIVISP 65
++ + KE I+NI L L +++++E++S + L G+++ +Q DN F +++
Sbjct: 9 VMKDVKELIQNILKDPFLKDLSPEISLDEVQSRLALEQGRAMTLNVQKLDNTSFPVIVLQ 68
Query: 66 KNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIE 125
T V +L++++E + ++K++G + +SW +VWK+Y L + +L+ L+ GI
Sbjct: 69 GAT-VHELRKSVENETVRRLKKEGRTTFVSWGYVWKTYSLFYGQHRLSKLDDKLANYGIS 127
Query: 126 SQCEITFVK 134
+ C+I + K
Sbjct: 128 NNCDIHWKK 136
>gi|339238065|ref|XP_003380587.1| putative STAS domain protein [Trichinella spiralis]
gi|316976515|gb|EFV59800.1| putative STAS domain protein [Trichinella spiralis]
Length = 900
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Query: 1 MKDLDQLLTETKEAIKNIRTQNTLSH-LPQDVTVEEIKSEMELLHGQSIMCCIQA-DNKK 58
+ +++Q L I+ ++ L + L VT++E++ E+ +L S+ I+ D K
Sbjct: 646 LDEVEQTLLSASRDIQMLKNDPFLKNSLSSKVTIDELRQEIAILQNGSLKIFIRRFDGKT 705
Query: 59 FDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSL 118
+I I KN V +LK+ I+R + ++ + K I+W +VW++YWL F+ KLT+ ++
Sbjct: 706 IEIDID-KNATVKELKKVIQRTFSRKLYNESSIKHINWAYVWRTYWLRFNQQKLTDNRAH 764
Query: 119 LSELG 123
+ G
Sbjct: 765 IYRTG 769
>gi|357473839|ref|XP_003607204.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
gi|355508259|gb|AES89401.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
Length = 162
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKNTRVSDLKRTIERQIT 82
L+ +P++ T+E++++ + L G ++ + ++ D FD+++ T + DLK I++++
Sbjct: 26 LADVPKNPTLEDVETLIGLELGSAMRITVLKLDTTSFDVILMNTAT-LKDLKLAIKKKVN 84
Query: 83 MQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+ + ISWR VW +Y LSFD KL N+ +L LG+ + +I FV + K
Sbjct: 85 YMEQSSMGHRHISWRSVWANYCLSFDNNKLLNDDDVLQNLGVRNNSQIHFVPYVMTK 141
>gi|159163176|pdb|1V2Y|A Chain A, Solution Structure Of Mouse Hypothetical Gene (Riken Cdna
3300001g02) Product Homologous To Ubiquitin Fold
Length = 105
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
Query: 45 GQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYW 104
G ++ C + D + +V+ +N V DLK+ I+R + ++ +R+G + ISW +VW++Y
Sbjct: 7 GMTVRVC-KMDGEVMPVVVV-QNATVLDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYH 64
Query: 105 LSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
L+ G KLT ++ L + GI ++ E++F+K+L K
Sbjct: 65 LTSAGEKLTEDRKKLRDYGIRNRDEVSFIKKLGQK 99
>gi|225459779|ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Vitis vinifera]
gi|302141700|emb|CBI18903.3| unnamed protein product [Vitis vinifera]
Length = 176
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKNTRVSDLKRTIERQIT 82
L+ +P++ T+ ++ + + L G ++ + I+ D+ FD+ + T V DLK I+++I
Sbjct: 40 LADVPKEPTLSDVDTLINLELGSAMRISVIKLDSTSFDVAVLNSAT-VKDLKLAIKKKIN 98
Query: 83 MQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFV 133
+ K + ISW+HVW ++ LS+ KL N+ S L + GI + ++ FV
Sbjct: 99 DMEQSKMGHRHISWKHVWANFCLSYYNDKLINDGSALQDFGIHNNSQVHFV 149
>gi|357473841|ref|XP_003607205.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
gi|355508260|gb|AES89402.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
Length = 146
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKNTRVSDLKRTIERQIT 82
L+ +P++ T+E++++ + L G ++ + ++ D FD+++ T + DLK I++++
Sbjct: 26 LADVPKNPTLEDVETLIGLELGSAMRITVLKLDTTSFDVILMNTAT-LKDLKLAIKKKVN 84
Query: 83 MQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEIT 131
+ + ISWR VW +Y LSFD KL N+ +L LG+ + +++
Sbjct: 85 YMEQSSMGHRHISWRSVWANYCLSFDNNKLLNDDDVLQNLGVRNNSQVS 133
>gi|168056786|ref|XP_001780399.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668159|gb|EDQ54772.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 166
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Query: 9 TETKEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKN 67
++ + + + +++L H+P++ TV + + + G +I + ++ D F++ + P N
Sbjct: 16 SQFEPLVSTLPYEHSLDHVPKNETVVGTDTLIGVKLGSAIRLSILKLDGIHFEVTV-PNN 74
Query: 68 TRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQ 127
+V DLK++I + + + + ISW+HVW ++ LSF KL ++ + L + GI +
Sbjct: 75 GKVRDLKQSIMMYVDSDEQSQLGHRHISWKHVWNNFCLSFGKEKLVDDDARLHDFGIRNN 134
Query: 128 CEITF 132
E+ F
Sbjct: 135 DELRF 139
>gi|116779533|gb|ABK21326.1| unknown [Picea sitchensis]
Length = 186
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 39 EMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRH 98
E E G +C + DN FD+ + P V +LK+ IE + +G +ISW H
Sbjct: 21 EEECNPGSIRLCIFRMDNTSFDVSV-PGTASVLELKKAIEDKFGNSQMEEG---KISWCH 76
Query: 99 VWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRL 136
VW ++ L+++ +L N+ SLLS GI+ E+ FV+ +
Sbjct: 77 VWGNFCLTYEDRELVNDGSLLSSFGIKDSDELFFVRHM 114
>gi|116784054|gb|ABK23196.1| unknown [Picea sitchensis]
Length = 186
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 36 IKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQIS 95
+ E E G +C + DN FD+ + P V +LK+ IE + +G +IS
Sbjct: 18 LSKEEECNPGSIRLCIFRMDNTSFDVSV-PGTASVLELKKAIEDKFGNSQMEEG---KIS 73
Query: 96 WRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRL 136
W HVW ++ L+++ +L N+ SLLS GI+ E+ FV+ +
Sbjct: 74 WCHVWGNFCLTYEDRELVNDGSLLSSFGIKDSDELFFVRHM 114
>gi|357477471|ref|XP_003609021.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
gi|355510076|gb|AES91218.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
Length = 441
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Query: 15 IKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKNTRVSDL 73
+K + L+ +P++ T+E++++ + L G ++ + ++ D FD+++ T + DL
Sbjct: 286 LKALLEDPILADVPKNPTLEDVETLIGLELGSAMRITVLKLDTTSFDVILMNTAT-LKDL 344
Query: 74 KRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGI 124
K I++++ + + ISWR VW +Y LSFD KL N+ +L LG+
Sbjct: 345 KLAIKKKVNYMEQSSMGHRHISWRSVWANYCLSFDNNKLLNDDDVLQNLGV 395
>gi|449475763|ref|XP_004176691.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Taeniopygia guttata]
Length = 76
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 50/75 (66%)
Query: 63 ISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSEL 122
++ ++ V+ LK+ R I + +G + +SWR++W++Y L+++G KL +++ L E
Sbjct: 1 MADHHSAVTVLKKAFRRHIHLSQAWQGGLQHLSWRYIWRTYHLTYNGEKLADDRKKLREY 60
Query: 123 GIESQCEITFVKRLK 137
GI ++ E++F+K+L+
Sbjct: 61 GIRNRDEVSFIKKLR 75
>gi|220897509|emb|CAX15111.1| chromosome 16 open reading frame 33 [Homo sapiens]
Length = 96
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITM 83
L LP VT+EE+ S++ L +GQ++ + K D ++ V DLK+ I+R + +
Sbjct: 8 LCDLPIQVTLEEVNSQIALEYGQAMTVRV----CKMD----GESATVLDLKKAIQRYVQL 59
Query: 84 QMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEK 116
+ +R+G + ISW +VW++Y L+ G KLT ++
Sbjct: 60 KQEREGGIQHISWSYVWRTYHLTSAGEKLTEDR 92
>gi|388519459|gb|AFK47791.1| unknown [Lotus japonicus]
Length = 269
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 1 MKDLDQLLTETKEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSI-----MCCIQAD 55
M + +LT T E IK+ + L ++ I ++ L+G+ + ++ D
Sbjct: 1 MAETSLILTTTTEKIKSRK----LLQFSTISIIDTIFAKKSFLYGKLPSQPFRLSVLKLD 56
Query: 56 NKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNE 115
FDI +S K +++LK +E + M KG +K ISW HVW + L +DG KL E
Sbjct: 57 GSSFDIQVS-KTASIAELKDAVE-AVFSHMPEKGPAK-ISWPHVWGQFCLCYDGQKLVTE 113
Query: 116 KSLLSELGIESQCEITFVKRLKDKVRIK 143
+ L GI+ E+ F++ + + ++
Sbjct: 114 EDYLRNYGIKDGDELHFMRHVSNNCTVR 141
>gi|242074686|ref|XP_002447279.1| hypothetical protein SORBIDRAFT_06g031870 [Sorghum bicolor]
gi|241938462|gb|EES11607.1| hypothetical protein SORBIDRAFT_06g031870 [Sorghum bicolor]
Length = 183
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKNTRVSDLKRTIERQIT 82
L+ +P+ ++ ++ + + L G ++ + ++ DN F++ + T V DLK I ++I
Sbjct: 47 LADVPRKPSLADVDTLINLELGSAMRLSVVKLDNTSFEVAVLNSAT-VKDLKLAIRKKIN 105
Query: 83 MQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDKV 140
+ + + ISW+HVW +Y L+ KL N+ S LS G+ + ++ F + +V
Sbjct: 106 EIEQEQMGHRHISWKHVWDNYCLTHHNEKLINDNSALSAYGVRNNSKVCFSPHVMSRV 163
>gi|224065725|ref|XP_002301940.1| predicted protein [Populus trichocarpa]
gi|222843666|gb|EEE81213.1| predicted protein [Populus trichocarpa]
Length = 173
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSIMCCIQA-DNKKFDIVISPKNTRVSDLKRTIERQIT 82
LS +P+ T+ ++ + + L G ++ +Q D FD+ + T V DLK I+R++
Sbjct: 37 LSDVPKKPTLSDVDTLISLEMGSAMRISVQKLDGTSFDVALMNSAT-VKDLKLAIKRKLI 95
Query: 83 MQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFV 133
+ K + ISW+ VW ++ LS+ KL ++ S L + GI + ++ F
Sbjct: 96 EMEQSKMGHRHISWKKVWANFALSYHNQKLLDDNSALQDSGIRNNSQVHFA 146
>gi|449455569|ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Cucumis sativus]
Length = 181
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 1 MKDLDQLLTETKEAIKNIRTQNTLSHL---------PQDVTVEEIKSEMELLHGQSI-MC 50
+KD + + +K +R +TL+ L P++ T+ + + + L G ++ +
Sbjct: 13 IKDEENAVGYHSNNVKKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAMRIS 72
Query: 51 CIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGI 110
++ D D+VI T + DLK I++++ + K + ISW+HVW ++ L+
Sbjct: 73 VLKLDGTAIDVVIMNSAT-LKDLKLAIKKKVNEMEQSKMGHRHISWKHVWANFCLAHLNE 131
Query: 111 KLTNEKSLLSELGIESQCEITFVKRLKDK 139
KL ++ S+L + GI + ++ F+ + K
Sbjct: 132 KLLDDSSVLQDFGIRNNSQVRFIPYVMSK 160
>gi|297743473|emb|CBI36340.3| unnamed protein product [Vitis vinifera]
Length = 630
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Query: 25 SHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQ 84
S LP D + K ++L + ++ D FD+ ++ +N +V++LK+ IE ++
Sbjct: 31 SLLPIDGNLSYRKLSLDLYK----LSILKLDGTSFDVQVA-RNAKVAELKQAIEEVFSLS 85
Query: 85 MKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRL 136
+ ISW HVW + L ++G KL N+K+ + ++GI+ ++ F++ +
Sbjct: 86 TNED--EENISWSHVWGHFCLCYEGQKLVNDKAHIRDVGIQDGDQLQFIQHI 135
>gi|388501394|gb|AFK38763.1| unknown [Medicago truncatula]
Length = 226
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 52 IQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIK 111
++ D FD+ +S KN +++LK +E + M + G +K ISW HVW + L +DG K
Sbjct: 53 LKLDGTSFDVHVS-KNATIAELKDAVE-GVFSYMPQHGPAK-ISWPHVWGQFCLCYDGQK 109
Query: 112 LTNEKSLLSELGIESQCEITFVKRLKD 138
L EK L G++ ++ F++ +
Sbjct: 110 LVTEKDYLKNYGVKDSDQLHFIRHASN 136
>gi|388521043|gb|AFK48583.1| unknown [Lotus japonicus]
Length = 220
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 52 IQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIK 111
++ D FDI +S K +++LK +E + M KG +K ISW HVW + L +DG K
Sbjct: 53 LKLDGSSFDIQVS-KTASIAELKDAVE-AVFSHMPEKGPAK-ISWPHVWGQFCLCYDGQK 109
Query: 112 LTNEKSLLSELGIESQCEITFVKRLKDKVRIK 143
L E+ L GI+ E+ F+ + + ++
Sbjct: 110 LVTEEDYLRNYGIKDGDELHFMCHVSNNCTVR 141
>gi|388501190|gb|AFK38661.1| unknown [Lotus japonicus]
Length = 163
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKNTRVSDLKRTIERQIT 82
LS +P++ T+ ++ + + L G ++ + I+ D FD+ + T V DLK I++++
Sbjct: 27 LSDVPKNPTLYDVDTLIGLELGSAMRISIIKLDATSFDVTVMNSAT-VKDLKLAIKKKVN 85
Query: 83 -MQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFV 133
M+ G +QISWR VW LS++ KL N+ L G+ + ++ FV
Sbjct: 86 DMEQSNMG-HRQISWRGVWAKCCLSYNNHKLLNDDDALQNFGVRNNSQVHFV 136
>gi|357437001|ref|XP_003588776.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
gi|355477824|gb|AES59027.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
Length = 266
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 52 IQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIK 111
++ D FD+ +S KN +++LK +E + M + G +K ISW HVW + L +DG K
Sbjct: 53 LKLDGTSFDVHVS-KNATIAELKDAVE-GVFSYMPQHGPAK-ISWPHVWGQFCLCYDGQK 109
Query: 112 LTNEKSLLSELGIESQCEITFVKRLKD 138
L EK L G++ ++ F++ +
Sbjct: 110 LVTEKDYLKNYGVKDSDQLHFIRHASN 136
>gi|449519748|ref|XP_004166896.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Cucumis sativus]
Length = 209
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKNTRVSDLKRTIERQIT 82
L+ +P++ T+ + + + L G ++ + ++ D D+VI T + DLK I++++
Sbjct: 73 LADVPKNPTLSHVDTLISLELGSAMRISVLKLDGTAIDVVIMNSAT-LKDLKLAIKKKVN 131
Query: 83 MQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+ K + ISW+HVW ++ L+ KL ++ S+L + GI + +I F+ + K
Sbjct: 132 EMEQSKMGHRHISWKHVWANFCLAHLNEKLLDDSSVLQDFGIRNNSQIRFIPYVMSK 188
>gi|225442930|ref|XP_002265295.1| PREDICTED: uncharacterized protein LOC100262712 [Vitis vinifera]
Length = 232
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Query: 25 SHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQ 84
S LP D + K ++L + ++ D FD+ ++ +N +V++LK+ IE ++
Sbjct: 31 SLLPIDGNLSYRKLSLDLYK----LSILKLDGTSFDVQVA-RNAKVAELKQAIEEVFSLS 85
Query: 85 MKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRL 136
+ ISW HVW + L ++G KL N+K+ + ++GI+ ++ F++ +
Sbjct: 86 TNED--EENISWSHVWGHFCLCYEGQKLVNDKAHIRDVGIQDGDQLQFIQHI 135
>gi|307136304|gb|ADN34128.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 181
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 75/148 (50%), Gaps = 11/148 (7%)
Query: 2 KDLDQLLTETKEAIKNIRTQNTLSHL---------PQDVTVEEIKSEMELLHGQSI-MCC 51
KD + ++ +K +R +TL+ L P++ T+ + + + L G ++ +
Sbjct: 14 KDEENVVGYHSNNVKKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAMRISV 73
Query: 52 IQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIK 111
++ D D++I T + DLK I++++ + K + ISW+HVW ++ L+ K
Sbjct: 74 LKLDGTAIDVLIMNSAT-LKDLKLAIKQKVNETEQSKMGHRHISWKHVWANFCLAHHNEK 132
Query: 112 LTNEKSLLSELGIESQCEITFVKRLKDK 139
+ ++ S+L + GI + ++ F+ + K
Sbjct: 133 ILDDSSVLQDFGIRNNSQVRFIPYVMSK 160
>gi|414584945|tpg|DAA35516.1| TPA: hypothetical protein ZEAMMB73_975050 [Zea mays]
Length = 177
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSI----------MCCIQADNKKF 59
++KEA K R Q+ L+ L D + ++ + L ++ + ++ DN F
Sbjct: 15 QSKEA-KQARLQSMLAALLDDPILADVTRKPSLADVDTLINLELGSAMRLTVVKLDNTSF 73
Query: 60 DIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLL 119
D+ + T V DLK I ++I + K + ISW+HVW +Y L+ KL + S L
Sbjct: 74 DVAVLNSAT-VKDLKLAIRKKINEIEQEKMGHRHISWKHVWDNYCLTHHNEKLIEDNSTL 132
Query: 120 SELGIESQCEITFVKRLKDKV 140
S G+ + ++ F + +V
Sbjct: 133 SSYGVRNNSKVCFSPHVMSRV 153
>gi|356538589|ref|XP_003537785.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like isoform 1 [Glycine max]
Length = 163
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKNTRVSDLKRTIERQIT 82
LS +P++ T ++ + + L G ++ + ++ D D+++ T V DLK I++++
Sbjct: 27 LSDVPKNPTFADVDTLINLELGSAMRISVLKLDGTTLDVIVMNSAT-VKDLKLAIKKKVN 85
Query: 83 -MQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
M+ G + ISW+HVW +Y LS KL ++ L G+ + ++ FV + K
Sbjct: 86 DMEQSSMG-HRHISWKHVWANYCLSCHNNKLLDDNEALQNFGVRNNSQVQFVSYVMTK 142
>gi|356541000|ref|XP_003538972.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Glycine max]
Length = 187
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKNTRVSDLKRTIERQIT 82
LS +P++ T ++ + + L G ++ + ++ D D+++ T V DLK I++++
Sbjct: 51 LSDVPKNPTFADVDTLINLELGSAMRISVLKLDGTTLDVIVMNSAT-VKDLKLAIKKKVN 109
Query: 83 -MQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
M+ G + ISW+HVW +Y LS KL ++ L G+ + ++ FV + K
Sbjct: 110 DMEQSSMG-HRHISWKHVWANYCLSCHNNKLLDDNEALQNFGVRNNSQVQFVSYVMTK 166
>gi|255548890|ref|XP_002515501.1| hypothetical protein RCOM_0923760 [Ricinus communis]
gi|223545445|gb|EEF46950.1| hypothetical protein RCOM_0923760 [Ricinus communis]
Length = 571
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 49 MCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFD 108
+ ++ D FD+ + K+ V++L++ IE + M RKG K ISW HVW + L F+
Sbjct: 58 LSILKLDGSCFDVEVM-KSATVAELRQAIE-AVFSHMPRKGPGK-ISWPHVWSHFCLMFE 114
Query: 109 GIKLTNEKSLLSELGIESQCEITFVKRLKDKVRIK 143
G KL E + GI ++ F++ + I+
Sbjct: 115 GQKLVRETDYIGYYGIRDGDQLQFIRHISTSYSIR 149
>gi|356538591|ref|XP_003537786.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like isoform 2 [Glycine max]
Length = 190
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKNTRVSDLKRTIERQIT 82
LS +P++ T ++ + + L G ++ + ++ D D+++ T V DLK I++++
Sbjct: 54 LSDVPKNPTFADVDTLINLELGSAMRISVLKLDGTTLDVIVMNSAT-VKDLKLAIKKKVN 112
Query: 83 MQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+ + ISW+HVW +Y LS KL ++ L G+ + ++ FV + K
Sbjct: 113 DMEQSSMGHRHISWKHVWANYCLSCHNNKLLDDNEALQNFGVRNNSQVQFVSYVMTK 169
>gi|167999003|ref|XP_001752207.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696602|gb|EDQ82940.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKNTRVSDLKRTIERQIT 82
L+ +P++ TV +I + + + G ++ + ++ D ++ + N +V DLK+ + + +
Sbjct: 27 LADVPKNATVADIDTLIGVELGSAMKLSILKLDGSHLEVAVL-NNAKVRDLKQAVMKYVD 85
Query: 83 MQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITF 132
Q + + ISW HVW + LS+ KL ++ + L + GI E+ F
Sbjct: 86 FQEQSHLGQRHISWSHVWDHFCLSYGKEKLLDDDARLHDFGIRKNDELRF 135
>gi|255638264|gb|ACU19445.1| unknown [Glycine max]
Length = 190
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKNTRVSDLKRTIERQIT 82
L +P++ T ++ + + L G ++ + ++ D D+++ T V DLK I++++
Sbjct: 54 LFDVPKNPTFADVDTFINLELGSAMRISVLKLDGTTLDVIVMNSAT-VKDLKLAIKKKVN 112
Query: 83 MQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDK 139
+ + ISW+HVW +Y LS KL ++ L G+ + ++ FV + K
Sbjct: 113 DMEQSSMGHRHISWKHVWANYCLSCHNNKLLDDNEALQNFGVRNNFQVQFVSYVMTK 169
>gi|6648198|gb|AAF21196.1|AC013483_20 unknown protein [Arabidopsis thaliana]
Length = 232
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 74/146 (50%), Gaps = 6/146 (4%)
Query: 1 MKDLDQLLTETKEAIKNIRTQ----NTLSHLPQDVTVEEIKSEMELLHGQSI-MCCIQAD 55
M+ D + +E +K++ +Q L+ +P++ T+ ++ + + L G ++ + ++ D
Sbjct: 1 MESGDYDVETKREKLKSVLSQLLADPILADVPRNPTLSDVVTLVSLEKGSAMRLSVVKLD 60
Query: 56 NKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNE 115
D+ + T ++ M+ G + ISW+HVW ++ LS + KL ++
Sbjct: 61 GSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMG-HRHISWKHVWSNFCLSCNNEKLLDD 119
Query: 116 KSLLSELGIESQCEITFVKRLKDKVR 141
++L ++GI + ++TF+ + K R
Sbjct: 120 NAVLQDVGIRNNSQVTFMPYVMKKGR 145
>gi|30680468|ref|NP_187443.2| U11/U12 small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|27754393|gb|AAO22645.1| unknown protein [Arabidopsis thaliana]
gi|48310596|gb|AAT41846.1| At3g07860 [Arabidopsis thaliana]
gi|332641091|gb|AEE74612.1| U11/U12 small nuclear ribonucleoprotein [Arabidopsis thaliana]
Length = 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 74/146 (50%), Gaps = 6/146 (4%)
Query: 1 MKDLDQLLTETKEAIKNIRTQ----NTLSHLPQDVTVEEIKSEMELLHGQSI-MCCIQAD 55
M+ D + +E +K++ +Q L+ +P++ T+ ++ + + L G ++ + ++ D
Sbjct: 1 MESGDYDVETKREKLKSVLSQLLADPILADVPRNPTLSDVVTLVSLEKGSAMRLSVVKLD 60
Query: 56 NKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNE 115
D+ + T ++ M+ G + ISW+HVW ++ LS + KL ++
Sbjct: 61 GSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMG-HRHISWKHVWSNFCLSCNNEKLLDD 119
Query: 116 KSLLSELGIESQCEITFVKRLKDKVR 141
++L ++GI + ++TF+ + K R
Sbjct: 120 NAVLQDVGIRNNSQVTFMPYVMKKGR 145
>gi|357117689|ref|XP_003560596.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Brachypodium distachyon]
Length = 150
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKNTRVSDLKRTIERQIT 82
L+ +P+ ++ ++ + + L G ++ + ++ D+ FD+ + T V DLK I+++I+
Sbjct: 38 LADVPRKPSLGDVDTLINLELGSAMRVIVVKLDDTSFDVPVLNTAT-VKDLKLAIKKKIS 96
Query: 83 MQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEI 130
+ + + ISW+++W++Y L++ KLT++ S LS G+ + ++
Sbjct: 97 EIEQGQMGYRHISWKYIWENYCLTYQNEKLTDDNSALSSHGVRNNSKV 144
>gi|388495574|gb|AFK35853.1| unknown [Lotus japonicus]
Length = 162
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKNTRVSDLKRTIERQIT 82
LS +P++ T+ ++ + L G ++ + I+ D FD+ + T V DLK I++++
Sbjct: 27 LSDVPKNPTLYDVDILIGLELGSAMRISIIKLDATSFDVTVMNSAT-VKDLKLAIKKKVN 85
Query: 83 -MQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFV 133
M+ G +QISWR VW LS++ KL N+ + L G+ + ++ FV
Sbjct: 86 DMEQSNMG-HRQISWRGVWAKCCLSYNNHKLLNDDA-LQNFGVRNNSQVHFV 135
>gi|116309855|emb|CAH66890.1| OSIGBa0099L20.5 [Oryza sativa Indica Group]
gi|218195764|gb|EEC78191.1| hypothetical protein OsI_17798 [Oryza sativa Indica Group]
Length = 187
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKNTRVSDLKRTIERQIT 82
L+ +P+ ++ ++ + + L G ++ + ++ D FD+ + T V DLK I ++
Sbjct: 51 LADVPRKPSLADVDTLINLELGSAMRLTVVKLDGTSFDVAMLNTAT-VKDLKMAIRKKTD 109
Query: 83 MQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDKV 140
+ K + ISW+H+W +Y L+ KL ++ S+LS GI + ++ F + +V
Sbjct: 110 EIEQEKMGHRHISWKHIWDNYCLTHQNEKLIDDNSVLSSNGICNNSKVYFSPHVMSRV 167
>gi|38346077|emb|CAE04845.2| OSJNBa0084K01.17 [Oryza sativa Japonica Group]
gi|222629718|gb|EEE61850.1| hypothetical protein OsJ_16518 [Oryza sativa Japonica Group]
Length = 187
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKNTRVSDLKRTIERQIT 82
L+ +P+ ++ ++ + + L G ++ + ++ D FD+ + T V DLK I ++
Sbjct: 51 LADVPRKPSLADVDTLINLELGSAMRLTVVKLDGTSFDVAMLNTAT-VKDLKMAIRKKTD 109
Query: 83 MQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDKV 140
+ K + ISW+H+W +Y L+ KL ++ S+LS GI + ++ F + +V
Sbjct: 110 EIEQEKMGHRHISWKHIWDNYCLTHQNEKLIDDNSVLSSNGICNNSKVYFSPHVMSRV 167
>gi|356563874|ref|XP_003550182.1| PREDICTED: uncharacterized protein LOC100820296 [Glycine max]
Length = 275
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 52 IQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIK 111
++ D F I +S K V++LK +E + + KG +K ISW HVW + L +DG K
Sbjct: 57 LKLDGSCFHIQVS-KTATVAELKDAVE-AVFSHVPHKGPAK-ISWAHVWGQFCLCYDGQK 113
Query: 112 LTNEKSLLSELGIESQCEITFVKRLKD 138
L EK L GI+ ++ F++ + +
Sbjct: 114 LVTEKDNLRNYGIKDGDQLRFIRHVTN 140
>gi|222622336|gb|EEE56468.1| hypothetical protein OsJ_05682 [Oryza sativa Japonica Group]
Length = 370
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 55 DNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTN 114
D+ FD+ I+ ++ V +LK IE + + + +K ISW+HVW + L F KLT+
Sbjct: 56 DDSYFDVQIA-RSAAVWELKAAIE-DVFAALYDETDNKAISWQHVWSHFCLCFKDEKLTD 113
Query: 115 EKSLLSELGIESQCEITFVKRL 136
+K+ L GI E+ F + L
Sbjct: 114 DKATLRAFGIRDGDEVHFAQHL 135
>gi|218190221|gb|EEC72648.1| hypothetical protein OsI_06171 [Oryza sativa Indica Group]
Length = 360
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 55 DNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTN 114
D+ FD+ I+ ++ V +LK IE + + + +K ISW+HVW + L F KLT+
Sbjct: 56 DDSYFDVQIA-RSAAVWELKAAIE-DVFAALYDETDNKAISWQHVWSHFCLCFKDEKLTD 113
Query: 115 EKSLLSELGIESQCEITFVKRL 136
+K+ L GI E+ F + L
Sbjct: 114 DKATLRAFGIRDGDELHFAQHL 135
>gi|297829342|ref|XP_002882553.1| hypothetical protein ARALYDRAFT_478124 [Arabidopsis lyrata subsp.
lyrata]
gi|297328393|gb|EFH58812.1| hypothetical protein ARALYDRAFT_478124 [Arabidopsis lyrata subsp.
lyrata]
Length = 165
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKNTRV 70
K + ++ L+ +P++ T+ ++ + + L G ++ + ++ D D+ + T
Sbjct: 16 KSVLSHLLADPILADVPRNPTLSDVVTLVSLEKGSAMRLSVVKLDGSSLDVAVMNSATLK 75
Query: 71 SDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEI 130
++ + G + ISW+HVW ++ LS + KL ++ +LL ++GI + ++
Sbjct: 76 DLKLLIKKKVNETEQANMG-HRHISWKHVWSNFCLSCNNEKLLDDNALLQDVGIRNNSQV 134
Query: 131 TFVKRLKDKVR 141
TF+ + K R
Sbjct: 135 TFMPYVMKKGR 145
>gi|115444711|ref|NP_001046135.1| Os02g0188500 [Oryza sativa Japonica Group]
gi|46389904|dbj|BAD15525.1| unknown protein [Oryza sativa Japonica Group]
gi|113535666|dbj|BAF08049.1| Os02g0188500 [Oryza sativa Japonica Group]
gi|215678897|dbj|BAG95334.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 324
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 55 DNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTN 114
D+ FD+ I+ ++ V +LK IE + + + +K ISW+HVW + L F KLT+
Sbjct: 122 DDSYFDVQIA-RSAAVWELKAAIE-DVFAALYDETDNKAISWQHVWSHFCLCFKDEKLTD 179
Query: 115 EKSLLSELGIESQCEITFVKRLKDKVR 141
+K+ L GI E+ F + L + R
Sbjct: 180 DKATLRAFGIRDGDEVHFAQHLSVEYR 206
>gi|297808549|ref|XP_002872158.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317995|gb|EFH48417.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 208
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 52 IQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIK 111
++ D FD+ + T V DLK IE + + +KG SK ISW HVW + L F G K
Sbjct: 24 LKLDGSSFDVYVLTSAT-VGDLKVAIETAFS-HVPKKGPSK-ISWSHVWGHFCLCFGGQK 80
Query: 112 LTNEKSLLSELGIESQCEITF 132
L + + G++ E+ F
Sbjct: 81 LITDTDCIGSYGLKDGDEVRF 101
>gi|449437400|ref|XP_004136480.1| PREDICTED: uncharacterized protein LOC101219460 [Cucumis sativus]
Length = 277
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 41 ELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVW 100
+L H ++ ++ D FDI + ++ V++LK +E + M + G K ISW HVW
Sbjct: 51 QLPHQPLMLSVLKLDGSSFDIQVR-RSATVAELKGAVELVFS-HMPQHGPGK-ISWLHVW 107
Query: 101 KSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRL 136
+ L + G KL ++ ++ GI+ ++ FV+ +
Sbjct: 108 WHFCLCYAGQKLVDDADYIASFGIKDGDQLQFVRHV 143
>gi|15239396|ref|NP_197916.1| ubiquitin-like domain-containing protein-like protein [Arabidopsis
thaliana]
gi|26451503|dbj|BAC42849.1| unknown protein [Arabidopsis thaliana]
gi|28973251|gb|AAO63950.1| unknown protein [Arabidopsis thaliana]
gi|332006045|gb|AED93428.1| ubiquitin-like domain-containing protein-like protein [Arabidopsis
thaliana]
Length = 208
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 52 IQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIK 111
++ D FD+ + T V DLK IE + + +KG SK ISW HVW + L F G K
Sbjct: 24 LKLDGSSFDVYVLTSAT-VGDLKVAIETAFS-HVPKKGPSK-ISWSHVWGHFCLCFGGQK 80
Query: 112 LTNEKSLLSELGIESQCEITF 132
L + + G++ E+ F
Sbjct: 81 LITDTDCIGNYGMKDGDEVRF 101
>gi|168033033|ref|XP_001769021.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679655|gb|EDQ66099.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 175
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 32 TVEEIKSEMELLHGQSI-MCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGL 90
TV ++ S + + G S+ + ++ D FD+V+ N+RV DLK+ + + + + +
Sbjct: 36 TVAKVDSLIGVELGTSMKLSILKLDGSHFDVVV-LTNSRVRDLKQAVVKYVDHLEQSELG 94
Query: 91 SKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITF 132
K+ISW+HVW + L KL ++ + L+ GI + ++ F
Sbjct: 95 HKRISWQHVWGHFCLCHGTEKLVDDDARLAGFGIRNNDQLRF 136
>gi|449520183|ref|XP_004167113.1| PREDICTED: uncharacterized LOC101219460 [Cucumis sativus]
Length = 277
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 41 ELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVW 100
+L H ++ ++ D FDI + ++ V++LK +E + M + G K ISW HVW
Sbjct: 51 QLPHQPLMLSVLKLDGSSFDIQVR-RSATVAELKGAVE-LVFSHMPQHGPGK-ISWLHVW 107
Query: 101 KSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRL 136
+ L + G KL ++ ++ GI+ ++ FV+ +
Sbjct: 108 WHFCLCYAGQKLVDDADYIASFGIKDGDQLQFVRHV 143
>gi|21554720|gb|AAM63670.1| unknown [Arabidopsis thaliana]
Length = 208
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 52 IQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIK 111
++ D FD+ + T V DLK IE + + +KG SK ISW HVW + L F G K
Sbjct: 24 LKLDGSSFDVYVLTSAT-VGDLKVAIETAFS-HVPKKGPSK-ISWSHVWGHFCLCFGGQK 80
Query: 112 LTNEKSLLSELGIESQCEITF 132
L + + G++ E+ F
Sbjct: 81 LITDTDCIGNYGMKDGDEVRF 101
>gi|356509914|ref|XP_003523687.1| PREDICTED: uncharacterized protein LOC100781177 [Glycine max]
Length = 259
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 48 IMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSF 107
I+ ++ D F + ++ T V++LK+ +E + ++ +KG K I W VW+ + LS+
Sbjct: 38 ILSILKLDASSFHVEVANAAT-VAELKQAVE-AVFCRVPQKGPGK-ILWPLVWRQFCLSY 94
Query: 108 DGIKLTNEKSLLSELGIESQCEITFVKRLKD 138
G KL +E + + GIE ++ FV + D
Sbjct: 95 QGQKLVSESDYIRDFGIEDGDQLHFVHHVSD 125
>gi|15220048|ref|NP_178123.1| ubiquitin-like domain-containing protein kinase [Arabidopsis
thaliana]
gi|54261721|gb|AAV31164.1| At1g80060 [Arabidopsis thaliana]
gi|58331795|gb|AAW70395.1| At1g80060 [Arabidopsis thaliana]
gi|332198231|gb|AEE36352.1| ubiquitin-like domain-containing protein kinase [Arabidopsis
thaliana]
Length = 243
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 45 GQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQ-MKRKGLSKQISWRHVWKSY 103
G+ + ++ + FD+ ++ K+ V++LKR +E+ T+ ++ G+ ISW HVW +
Sbjct: 51 GRIKLSVVKLNGSLFDVEVA-KDCSVAELKRAVEQVFTISPLEGHGM---ISWSHVWGHF 106
Query: 104 WLSFDGIKLTNEKSLLSELGIESQCEITFVKRL 136
L + +L N+K+ + LG+ ++ FV+ L
Sbjct: 107 CLCYRDQRLVNDKTSIRYLGLNDGDQLHFVRHL 139
>gi|145351239|ref|NP_194954.2| ubiquitin-like family protein [Arabidopsis thaliana]
gi|26450559|dbj|BAC42392.1| unknown protein [Arabidopsis thaliana]
gi|332660628|gb|AEE86028.1| ubiquitin-like family protein [Arabidopsis thaliana]
Length = 239
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 49 MCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFD 108
+ ++ D F I + K V +LK +E + + G K ISW HVW + LS++
Sbjct: 40 LTVLKLDGSSFGIQVL-KTATVGELKMAVEAAFS-HLPISGPGK-ISWPHVWGQFCLSYE 96
Query: 109 GIKLTNEKSLLSELGIESQCEITFVKRLKD 138
+L NE L+E GI+ ++ F++ + +
Sbjct: 97 DKRLINESEYLTEFGIKDGDQLRFIRHISN 126
>gi|297839931|ref|XP_002887847.1| hypothetical protein ARALYDRAFT_895992 [Arabidopsis lyrata subsp.
lyrata]
gi|297333688|gb|EFH64106.1| hypothetical protein ARALYDRAFT_895992 [Arabidopsis lyrata subsp.
lyrata]
Length = 243
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 45 GQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQ-MKRKGLSKQISWRHVWKSY 103
G+ + ++ + FD+ ++ K+ V++LKR +E+ T+ ++ G+ ISW HVW +
Sbjct: 51 GRIKLSVVKLNGSLFDVEVA-KDCSVAELKRAVEQVFTISPLEAHGM---ISWSHVWGHF 106
Query: 104 WLSFDGIKLTNEKSLLSELGIESQCEITFVKRL 136
LS+ +L N+K+ + L + ++ FV+ L
Sbjct: 107 CLSYRDQRLVNDKTSIRYLALSDGDQLRFVRHL 139
>gi|149392044|gb|ABR25901.1| conserved hypothetical protein [Oryza sativa Indica Group]
Length = 95
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 52 IQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIK 111
++ D FD+ + T V DLK I ++ K + ISW+H+W +Y L+ K
Sbjct: 7 VKLDGTSFDVAMLNTAT-VKDLKMAIRKKTDEIEPEKMGHRHISWKHIWDNYCLTHQNEK 65
Query: 112 LTNEKSLLSELGIESQCEITFVKRLKDKV 140
L ++ S+LS GI + ++ F + +V
Sbjct: 66 LIDDNSVLSSNGICNNSKVYFSPHVMSRV 94
>gi|255553225|ref|XP_002517655.1| conserved hypothetical protein [Ricinus communis]
gi|223543287|gb|EEF44819.1| conserved hypothetical protein [Ricinus communis]
Length = 274
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 52 IQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIK 111
++ D FD+ I +N V++LK+ +E +I +G K ISW VW + LS++ K
Sbjct: 79 LKLDGSSFDVNIG-RNATVAELKQAVE-EIFSSSPEEGHDK-ISWSLVWGHFCLSYENQK 135
Query: 112 LTNEKSLLSELGIESQCEITFVKRL 136
L N+K + GI+ ++ F++ +
Sbjct: 136 LINDKVCIRNFGIKDGDQLQFIRHM 160
>gi|145334195|ref|NP_001078478.1| ubiquitin-like family protein [Arabidopsis thaliana]
gi|332660629|gb|AEE86029.1| ubiquitin-like family protein [Arabidopsis thaliana]
Length = 204
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 66 KNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIE 125
K V +LK +E + + G K ISW HVW + LS++ +L NE L+E GI+
Sbjct: 21 KTATVGELKMAVEAAFS-HLPISGPGK-ISWPHVWGQFCLSYEDKRLINESEYLTEFGIK 78
Query: 126 SQCEITFVKRLKD 138
++ F++ + +
Sbjct: 79 DGDQLRFIRHISN 91
>gi|297798732|ref|XP_002867250.1| hypothetical protein ARALYDRAFT_491506 [Arabidopsis lyrata subsp.
lyrata]
gi|297313086|gb|EFH43509.1| hypothetical protein ARALYDRAFT_491506 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 49 MCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFD 108
+ ++ D F I + K V +LK +E + + G K ISW HVW + LS++
Sbjct: 39 LTVLKLDGSSFGIQVL-KTATVGELKMAVEAAFS-HLPISGPGK-ISWPHVWGQFCLSYE 95
Query: 109 GIKLTNEKSLLSELGIESQCEITFVKRLKD 138
+L NE L E GI+ ++ F++ + +
Sbjct: 96 DKRLINESEYLLEFGIKDGDQLRFIRHISN 125
>gi|149052202|gb|EDM04019.1| similar to chromosome 16 open reading frame 33; minus -99 protein
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 95
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSI---MCCIQADNKKFDIVISPKNTRVSDLKRTIERQ 80
L LP VT+EE+ S++ L +GQ++ +C + D + +V+ +N V DLK+ I+R
Sbjct: 8 LCDLPIQVTLEEVNSQIALEYGQAMTVRVC--KMDGEVMPVVVV-QNATVLDLKKAIQRY 64
Query: 81 ITMQMKRKGLSKQISWRHVW 100
+ ++ +R+G + IS +V
Sbjct: 65 VQLKQEREGGVQHISCTYVL 84
>gi|441659753|ref|XP_003269146.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein,
partial [Nomascus leucogenys]
Length = 157
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 12 KEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCI-QADNKKFDIVISPKNTRV 70
+E + + L LP VT+EE+ S++ L +GQ++ + + D + +V+ T V
Sbjct: 73 QEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSAT-V 131
Query: 71 SDLKRTIERQITMQMKRKGLSKQISW 96
DLK+ I+R + ++ +R+G + ISW
Sbjct: 132 LDLKKAIQRYVQLKQEREGGIQHISW 157
>gi|440795556|gb|ELR16676.1| hypothetical protein ACA1_089240 [Acanthamoeba castellanii str.
Neff]
Length = 185
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 52 IQADNKKFDIVISPKNTRVSDLKRTIERQITMQ-MKRKGLSKQISWRHVWKSYWLSFDGI 110
++ D K+ +V++ T + +LKR ++ + Q +R G +++I+W+HVW L ++G
Sbjct: 80 LKHDGKRIPLVVT-YTTMLDELKRQLQLVVDHQTAERLGPTRRINWKHVWDRQCLMYEGR 138
Query: 111 KLTNEKSLLSELGI 124
+L + K LL + G+
Sbjct: 139 RLLDGKQLLCDAGL 152
>gi|449469242|ref|XP_004152330.1| PREDICTED: uncharacterized protein LOC101206096 [Cucumis sativus]
Length = 243
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 52 IQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIK 111
++ D F I +S +N+ V+DLKR IE+ +I+W +W + L ++G K
Sbjct: 61 LKLDGSVFGIRVS-RNSTVADLKRAIEK--VFDSPGGSEHYKITWSLIWGHFCLCYEGEK 117
Query: 112 LTNEKSLLSELGIESQCEITFVKRL 136
L ++K+ + GI+ ++ F++ +
Sbjct: 118 LIDDKTCIKGYGIKDGDQLQFIRHM 142
>gi|259490128|ref|NP_001159154.1| hypothetical protein [Zea mays]
gi|223942319|gb|ACN25243.1| unknown [Zea mays]
gi|413935984|gb|AFW70535.1| hypothetical protein ZEAMMB73_861622 [Zea mays]
Length = 266
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 55 DNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTN 114
D+ FDI I+ ++ V +LK TIE + K ISW HVW + L F +LT+
Sbjct: 64 DDSFFDIEIA-RSATVWELKVTIENLFSALYD--DTQKTISWNHVWSHFCLCFKDERLTD 120
Query: 115 EKSLLSELGIESQCEITFVKRL 136
+K+ L GI + F + L
Sbjct: 121 DKATLRGFGIRDGDVLHFAQHL 142
>gi|357138938|ref|XP_003571043.1| PREDICTED: uncharacterized protein LOC100841643 [Brachypodium
distachyon]
Length = 320
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 55 DNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTN 114
D+ FD+ I+ ++ V +LK IE + I+W+HVW + L F KLT+
Sbjct: 113 DDSYFDVQIA-RSAAVWELKAAIEAVFIALFY--DMDNAITWQHVWSHFCLCFKDEKLTD 169
Query: 115 EKSLLSELGIESQCEITFVKRL 136
+++ L GI+ E+ F + L
Sbjct: 170 DRATLRAFGIKDGDELHFSQHL 191
>gi|148691818|gb|EDL23765.1| RIKEN cDNA 3300001G02, isoform CRA_b [Mus musculus]
Length = 119
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
Query: 24 LSHLPQDVTVEEIKSEMELLHGQSI---MCCIQADNKKFDIVISPKNTRVSDLKRTIERQ 80
L LP VT+EE+ S++ L +GQ++ +C + D + +V+ +N V DLK+ I+R
Sbjct: 8 LCDLPIQVTLEEVNSQIALEYGQAMTVRVC--KMDGEVMPVVVV-QNATVLDLKKAIQRY 64
Query: 81 ITMQMKRKGLSKQIS 95
+ ++ +R+G + IS
Sbjct: 65 VQLKQEREGGVQHIS 79
>gi|356518246|ref|XP_003527790.1| PREDICTED: uncharacterized protein LOC100790105 [Glycine max]
Length = 258
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 48 IMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSF 107
I+ ++ D F + ++ T V++LK+ +E + + +KG K I W VW+ + L +
Sbjct: 41 ILSILKLDASSFHVEVANAAT-VAELKQAVE-AVFSHVPQKGPGK-ILWPLVWRQFCLCY 97
Query: 108 DGIKLTNEKSLLSELGIESQCEITFVKRLKD 138
G KL +E + + GI+ ++ FV + D
Sbjct: 98 QGQKLVSEMDYIRDYGIKDGDQLHFVYHVSD 128
>gi|195579688|ref|XP_002079693.1| GD24091 [Drosophila simulans]
gi|194191702|gb|EDX05278.1| GD24091 [Drosophila simulans]
Length = 281
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 53/183 (28%)
Query: 7 LLTETKEAIKNI-RTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISP 65
+L T E ++ I + TLS +P D+T E++ E+ + G++ +Q D V+ P
Sbjct: 92 MLASTSEELRRILQDVETLSDIPHDITNTELRGEIAIAEGRATTIYVQRDGLSTLTVVLP 151
Query: 66 KN-TRVSDLKRTI------------ERQITMQMKRKGLSKQ------------------- 93
++ ++ LKR I + ++ R+G++
Sbjct: 152 QHEPTIAPLKRAIALISRAQHKRSQRERCEKRLPRRGIADDSDERRQPVAVASSTGELVH 211
Query: 94 ------------ISWRHVWKSYWL-------SFDGIKLTNEKSLLSELGIESQCEITFVK 134
+SWR +W+ + L D + + ++ L ELGIE+ + FV
Sbjct: 212 SAQRNGHDHRAFVSWRFLWRCFGLLNVDTNQPIDDQRCSG-RATLKELGIENAATLKFVH 270
Query: 135 RLK 137
R+K
Sbjct: 271 RVK 273
>gi|431922629|gb|ELK19549.1| Ubiquitin cross-reactive protein [Pteropus alecto]
Length = 156
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 45 GQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKS-- 102
G +++ +Q + + DI++S + R S E Q+T ++ L +Q+S R +
Sbjct: 59 GSTVLLVVQNCDARLDILVSNERGRTS----VYEVQLTQKVAE--LQQQVSRRESTPADQ 112
Query: 103 YWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDKV 140
+WLSF GI + E L + G+ S C + RL+
Sbjct: 113 FWLSFQGIPMEGEHQ-LGDYGLTSLCTVHMNLRLRGGA 149
>gi|296082049|emb|CBI21054.3| unnamed protein product [Vitis vinifera]
Length = 251
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 49 MCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFD 108
+ ++ D F I ++ K + V++LK+ +E + + +KG K ISW HVW + L ++
Sbjct: 47 LSVLKLDGSCFQIEVT-KTSTVAELKQAVEDAFS-HLPKKGPGK-ISWLHVWGHFCLCYN 103
Query: 109 GIKLTNEKSLLSELGIE--SQCEITFVK 134
KL E + GI+ Q ++ FV+
Sbjct: 104 DQKLVTETEYIKNYGIKDGDQVQLHFVR 131
>gi|326500444|dbj|BAK06311.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 304
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 55 DNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTN 114
D+ FD+ I+ ++ V +LK I Q + ++W+HVW + L F K+ +
Sbjct: 96 DDSYFDVRIA-RSAAVWELKAAI--QGVFVALYHDMENAVTWQHVWSHFCLCFKDEKMMD 152
Query: 115 EKSLLSELGIESQCEITFVKRL 136
+K+ L GI+ E+ F + L
Sbjct: 153 DKATLRAFGIKDGDELHFAQHL 174
>gi|194758994|ref|XP_001961741.1| GF14776 [Drosophila ananassae]
gi|190615438|gb|EDV30962.1| GF14776 [Drosophila ananassae]
Length = 238
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 75/189 (39%), Gaps = 54/189 (28%)
Query: 3 DLDQ-----LLTETKEAIKNI-RTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADN 56
D DQ +L T +++I +TLS +P D+T E+ E+ + GQ+ +Q D
Sbjct: 42 DFDQSEHNAMLASTSRELRHILENFSTLSDIPHDITSTELLGEIAIAEGQATTIHVQRDG 101
Query: 57 -KKFDIVISPKNTRVSDLKRTIERQITMQMKRK------------GLSKQ---------- 93
+V+ ++ LKR I Q +RK G+++
Sbjct: 102 LSTLTVVLHQPEPTIAHLKRAIANISLAQHRRKHRERHEERLRRRGITEDAKHEEHVSTS 161
Query: 94 -------------------ISWRHVWKSYWL-SFDGIKLTNE-----KSLLSELGIESQC 128
+SWR +W+ + L + D + ++ ++ L ELGIE+
Sbjct: 162 STGELVHSARRNGHDHRAFVSWRFLWRCFCLFNVDKSQPIDDRGSKGRTTLRELGIENAT 221
Query: 129 EITFVKRLK 137
+ F R+K
Sbjct: 222 TLKFAHRVK 230
>gi|242064292|ref|XP_002453435.1| hypothetical protein SORBIDRAFT_04g006000 [Sorghum bicolor]
gi|241933266|gb|EES06411.1| hypothetical protein SORBIDRAFT_04g006000 [Sorghum bicolor]
Length = 274
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 55 DNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIKLTN 114
D+ FDI I+ ++ V +LK IE + K ISW HVW + L F ++T+
Sbjct: 67 DDSFFDIEIA-RSATVWELKVAIENLFSDLYD--DAQKTISWNHVWSHFCLCFKDERMTD 123
Query: 115 EKSLLSELGIESQCEITFVKRL 136
+K+ L GI + F + L
Sbjct: 124 DKATLRGFGIRDGDVLHFAQHL 145
>gi|255572471|ref|XP_002527170.1| conserved hypothetical protein [Ricinus communis]
gi|223533435|gb|EEF35183.1| conserved hypothetical protein [Ricinus communis]
Length = 114
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 52 IQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFDGIK 111
++ + F++ +S T V +LK+ +E T + ISW HVW + L + G K
Sbjct: 28 LKLNGSFFEVQVSRMAT-VGELKQAVENVFT-HSPEDDMHMNISWWHVWSHFCLCYKGQK 85
Query: 112 LTNEKSLLSELGIE 125
L ++K+ + GI+
Sbjct: 86 LIHDKAYIQSFGIK 99
>gi|195344616|ref|XP_002038877.1| GM17216 [Drosophila sechellia]
gi|194134007|gb|EDW55523.1| GM17216 [Drosophila sechellia]
Length = 190
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 53/183 (28%)
Query: 7 LLTETKEAIKNI-RTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADN-KKFDIVIS 64
+L T E ++ I + TLS +P D+T E++ E+ + G++ +Q D +V+
Sbjct: 1 MLASTSEELRRILQDIETLSDIPHDITNIELRGEIAIAEGRATTIYVQRDGLSTLTVVLH 60
Query: 65 PKNTRVSDLKRTIERQITMQMKRK------------GLSKQ------------------- 93
++ LKR I Q KR G++
Sbjct: 61 QHEPTIAQLKRAIALISRAQHKRSQRERCEERLRRRGIADDSDERRQPVPVASSTGELVH 120
Query: 94 ------------ISWRHVWKSYWL-------SFDGIKLTNEKSLLSELGIESQCEITFVK 134
+SWR +W+ + L D + ++ ++ L ELGIE+ + FV
Sbjct: 121 SAHRNGHDHRAFVSWRFLWRCFGLLNVDTNQPIDDQR-SSGRATLKELGIENAATLKFVH 179
Query: 135 RLK 137
R+K
Sbjct: 180 RVK 182
>gi|161076935|ref|NP_001097169.1| CG34313 [Drosophila melanogaster]
gi|157400172|gb|ABV53687.1| CG34313 [Drosophila melanogaster]
Length = 281
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 73/183 (39%), Gaps = 53/183 (28%)
Query: 7 LLTETKEAIKNI-RTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADN-KKFDIVIS 64
+L T E ++ I + TLS +P D+T E++ E+ + G++ +Q D +V+
Sbjct: 92 MLASTSEELRRILQDVETLSDIPHDITNVELQGEIAIAEGRATTIYVQRDGLSTLTVVLH 151
Query: 65 PKNTRVSDLKRTI------------------------------ER-----------QITM 83
++ LKR I ER ++
Sbjct: 152 QHEPTIAQLKRAIALISRAQHKRSQRERCEERLRRRGIADDSDERRQPVAVASSTGELVH 211
Query: 84 QMKRKGLSKQ--ISWRHVWKSYWL-------SFDGIKLTNEKSLLSELGIESQCEITFVK 134
+R G + +SWR +W+ + L D + ++ ++ L ELGIE+ + FV
Sbjct: 212 SAQRNGHDHRAFVSWRFLWRCFGLLNVDTNQPIDDQR-SSGRATLKELGIENAATLKFVH 270
Query: 135 RLK 137
R+K
Sbjct: 271 RVK 273
>gi|332226318|ref|XP_003262335.1| PREDICTED: glutamate dehydrogenase 2, mitochondrial-like [Nomascus
leucogenys]
Length = 555
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 13 EAIKNIRTQNTLSHLP--------QDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVIS 64
E I+ RTQ++ P DV+V+E+K+ L+ + + + K + I+
Sbjct: 127 EVIEGYRTQHSQHRTPCKGGIRYSADVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKIN 186
Query: 65 PKNTRVSDLKRTIERQITMQMKRKGL 90
PKN ++L++ I R+ TM++ +KG
Sbjct: 187 PKNYTENELEK-ITRRFTMELAKKGF 211
>gi|426251065|ref|XP_004019252.1| PREDICTED: dynein heavy chain 8, axonemal [Ovis aries]
Length = 4735
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSE-MELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+K+ M++ H S+ ++ + + VIS +
Sbjct: 4460 ETREAIVYRLSEDMLSKLPPDYIPHEVKARLMKMGHLNSMNIFLRQEIDRMQKVISILRS 4519
Query: 69 RVSDLKRTIERQITMQMK-RKGLS-----------KQISWRHVWKSYWLS 106
+SDLK IE I M R L K++SW +W +
Sbjct: 4520 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQIWKRVSWDSSTLGFWFT 4569
>gi|327286228|ref|XP_003227833.1| PREDICTED: glutamate dehydrogenase 2, mitochondrial-like [Anolis
carolinensis]
Length = 573
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 13 EAIKNIRTQNTLSHLP--------QDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVIS 64
E IK R Q++ LP Q V+V E+K+ L+ + + + K + I
Sbjct: 146 EVIKGYRVQHSQHRLPCKGGIRYSQSVSVNEVKALAALMTYKCAVVDVPFGGAKAGVAID 205
Query: 65 PKNTRVSDLKRTIERQITMQMKRKGL 90
P+N ++L++ I R T++M +KG
Sbjct: 206 PRNYSENELEK-ITRSFTIEMAKKGF 230
>gi|14335444|gb|AAK60620.1|AF356519_1 axonemal dynein heavy chain 8 [Homo sapiens]
Length = 4490
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+KS + ++ H S+ ++ + + VIS +
Sbjct: 4215 ETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISVLRS 4274
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 4275 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4324
>gi|355561663|gb|EHH18295.1| hypothetical protein EGK_14863, partial [Macaca mulatta]
Length = 3623
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+KS + ++ H S+ ++ + + VIS +
Sbjct: 3348 ETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRS 3407
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 3408 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 3457
>gi|119574899|gb|EAW54514.1| hCG2040250 [Homo sapiens]
Length = 187
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 30 DVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKG 89
DV+V+E+K+ L+ + + + K + I+PKN ++L++ I R+ TM++ +KG
Sbjct: 106 DVSVDEVKTLASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEK-ITRRFTMELAKKG 164
Query: 90 LSKQISWRH 98
I W H
Sbjct: 165 F---IVWPH 170
>gi|332688227|ref|NP_001193856.1| dynein heavy chain 8, axonemal [Homo sapiens]
Length = 4707
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+KS + ++ H S+ ++ + + VIS +
Sbjct: 4432 ETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRS 4491
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 4492 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4541
>gi|13096305|pdb|1HWY|A Chain A, Bovine Glutamate Dehydrogenase Complexed With Nad And
2-Oxoglutarate
gi|13096306|pdb|1HWY|B Chain B, Bovine Glutamate Dehydrogenase Complexed With Nad And
2-Oxoglutarate
gi|13096307|pdb|1HWY|C Chain C, Bovine Glutamate Dehydrogenase Complexed With Nad And
2-Oxoglutarate
gi|13096308|pdb|1HWY|D Chain D, Bovine Glutamate Dehydrogenase Complexed With Nad And
2-Oxoglutarate
gi|13096309|pdb|1HWY|E Chain E, Bovine Glutamate Dehydrogenase Complexed With Nad And
2-Oxoglutarate
gi|13096310|pdb|1HWY|F Chain F, Bovine Glutamate Dehydrogenase Complexed With Nad And
2-Oxoglutarate
gi|13096311|pdb|1HWZ|A Chain A, Bovine Glutamate Dehydrogenase Complexed With Nadph,
Glutamate, And Gtp
gi|13096312|pdb|1HWZ|B Chain B, Bovine Glutamate Dehydrogenase Complexed With Nadph,
Glutamate, And Gtp
gi|13096313|pdb|1HWZ|C Chain C, Bovine Glutamate Dehydrogenase Complexed With Nadph,
Glutamate, And Gtp
gi|13096314|pdb|1HWZ|D Chain D, Bovine Glutamate Dehydrogenase Complexed With Nadph,
Glutamate, And Gtp
gi|13096315|pdb|1HWZ|E Chain E, Bovine Glutamate Dehydrogenase Complexed With Nadph,
Glutamate, And Gtp
gi|13096316|pdb|1HWZ|F Chain F, Bovine Glutamate Dehydrogenase Complexed With Nadph,
Glutamate, And Gtp
Length = 501
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 13 EAIKNIRTQNTLSHLP--------QDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVIS 64
E I+ R Q++ P DV+V+E+K+ L+ + + + K + I+
Sbjct: 73 EVIEGYRAQHSHQRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKIN 132
Query: 65 PKNTRVSDLKRTIERQITMQMKRKGL 90
PKN DL++ I R+ TM++ +KG
Sbjct: 133 PKNYTDEDLEK-ITRRFTMELAKKGF 157
>gi|351697401|gb|EHB00320.1| Glutamate dehydrogenase 1, mitochondrial [Heterocephalus glaber]
Length = 550
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 13 EAIKNIRTQNTLSHLP--------QDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVIS 64
E I+ R Q++ P DV+V+E+K+ L+ + + + K + I+
Sbjct: 122 EVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKIN 181
Query: 65 PKNTRVSDLKRTIERQITMQMKRKGL 90
PKN S+L++ I R+ TM++ +KG
Sbjct: 182 PKNYSDSELEK-ITRRFTMELAKKGF 206
>gi|410040760|ref|XP_003950888.1| PREDICTED: dynein heavy chain 8, axonemal [Pan troglodytes]
Length = 4707
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+KS + ++ H S+ ++ + + VIS +
Sbjct: 4432 ETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRS 4491
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 4492 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4541
>gi|355748527|gb|EHH53010.1| hypothetical protein EGM_13563, partial [Macaca fascicularis]
Length = 4612
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+KS + ++ H S+ ++ + + VIS +
Sbjct: 4337 ETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRS 4396
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 4397 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4446
>gi|297678028|ref|XP_002816892.1| PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain 8, axonemal [Pongo
abelii]
Length = 4548
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+KS + ++ H S+ ++ + + VIS +
Sbjct: 4273 ETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRS 4332
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 4333 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4382
>gi|119624371|gb|EAX03966.1| dynein, axonemal, heavy polypeptide 8, isoform CRA_a [Homo sapiens]
Length = 4358
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+KS + ++ H S+ ++ + + VIS +
Sbjct: 4215 ETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRS 4274
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 4275 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4324
>gi|397496193|ref|XP_003818927.1| PREDICTED: dynein heavy chain 8, axonemal isoform 2 [Pan paniscus]
Length = 4490
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+KS + ++ H S+ ++ + + VIS +
Sbjct: 4215 ETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRS 4274
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 4275 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4324
>gi|397496191|ref|XP_003818926.1| PREDICTED: dynein heavy chain 8, axonemal isoform 1 [Pan paniscus]
Length = 4707
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+KS + ++ H S+ ++ + + VIS +
Sbjct: 4432 ETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRS 4491
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 4492 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4541
>gi|119624372|gb|EAX03967.1| dynein, axonemal, heavy polypeptide 8, isoform CRA_b [Homo sapiens]
Length = 2542
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+KS + ++ H S+ ++ + + VIS +
Sbjct: 2267 ETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRS 2326
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 2327 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 2376
>gi|332823965|ref|XP_001173806.2| PREDICTED: dynein heavy chain 8, axonemal isoform 4 [Pan troglodytes]
Length = 4490
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+KS + ++ H S+ ++ + + VIS +
Sbjct: 4215 ETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRS 4274
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 4275 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4324
>gi|332255719|ref|XP_003276979.1| PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain 8, axonemal
[Nomascus leucogenys]
Length = 4601
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+KS + ++ H S+ ++ + + VIS +
Sbjct: 4326 ETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRS 4385
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 4386 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4435
>gi|403261992|ref|XP_003923382.1| PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain 8, axonemal
[Saimiri boliviensis boliviensis]
Length = 4560
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+KS + ++ H S+ ++ + + VIS +
Sbjct: 4285 ETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRS 4344
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 4345 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4394
>gi|297290762|ref|XP_002803779.1| PREDICTED: dynein heavy chain 8, axonemal-like [Macaca mulatta]
Length = 4664
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+KS + ++ H S+ ++ + + VIS +
Sbjct: 4389 ETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRS 4448
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 4449 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4498
>gi|124007137|sp|Q96JB1.2|DYH8_HUMAN RecName: Full=Dynein heavy chain 8, axonemal; AltName: Full=Axonemal
beta dynein heavy chain 8; AltName: Full=Ciliary dynein
heavy chain 8
Length = 4490
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+KS + ++ H S+ ++ + + VIS +
Sbjct: 4215 ETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRS 4274
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 4275 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4324
>gi|344293883|ref|XP_003418649.1| PREDICTED: glutamate dehydrogenase 1, mitochondrial [Loxodonta
africana]
Length = 558
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 13 EAIKNIRTQNTLSHLP--------QDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVIS 64
E I+ R Q++ P DV+V+E+K+ L+ + + + K + I+
Sbjct: 130 EVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKIN 189
Query: 65 PKNTRVSDLKRTIERQITMQMKRKGL 90
PKN S+L++ I R+ TM++ +KG
Sbjct: 190 PKNYTDSELEK-ITRRFTMELAKKGF 214
>gi|426353030|ref|XP_004044003.1| PREDICTED: dynein heavy chain 8, axonemal-like [Gorilla gorilla
gorilla]
Length = 551
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+KS + ++ H S+ ++ + + VIS +
Sbjct: 276 ETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISVLRS 335
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 336 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 385
>gi|296198082|ref|XP_002746559.1| PREDICTED: dynein heavy chain 8, axonemal [Callithrix jacchus]
Length = 4687
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+KS + ++ H S+ ++ + + VIS +
Sbjct: 4412 ETREAIVYRLSEDMLSKLPPDYVPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRS 4471
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK +E I M + L K++SW +W +
Sbjct: 4472 SLSDLKLAVEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4521
>gi|402866904|ref|XP_003897611.1| PREDICTED: dynein heavy chain 8, axonemal-like [Papio anubis]
Length = 350
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+KS + ++ H S+ ++ + + VIS +
Sbjct: 75 ETREAIVYRLSEDMLSKLPSDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRS 134
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 135 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 184
>gi|224089270|ref|XP_002308669.1| predicted protein [Populus trichocarpa]
gi|222854645|gb|EEE92192.1| predicted protein [Populus trichocarpa]
Length = 292
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 49 MCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRKGLSKQISWRHVWKSYWLSFD 108
+ ++ D F+I + K+ V +L++ +E + M ++G K ISW H+W + L +
Sbjct: 81 LSVLKLDASSFEIEVM-KSATVEELRQAVEAAFSY-MPQEGPGK-ISWPHLWGHFCLCYG 137
Query: 109 GIKLTNEKSLLSELGIESQCEITFVKRL 136
KL E + GI+ ++ F++ +
Sbjct: 138 DQKLLMETDYIKNYGIKDGDQLQFIRHV 165
>gi|431838407|gb|ELK00339.1| Dynein heavy chain 8, axonemal [Pteropus alecto]
Length = 4051
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSE-MELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+K+ M++ H S+ ++ + + VIS +
Sbjct: 3776 ETREAIVYRLSEDMLSKLPLDYIPHEVKARLMKMGHLNSMNIFLRQEIDRMQKVISILRS 3835
Query: 69 RVSDLKRTIERQITMQMK-RKGLS-----------KQISWRHVWKSYWLS 106
+SDLK IE I M R L K++SW +W +
Sbjct: 3836 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQIWKRVSWDSSTLGFWFT 3885
>gi|118534|sp|P00368.1|DHE3_CHICK RecName: Full=Glutamate dehydrogenase 1, mitochondrial; Short=GDH 1
Length = 503
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 13 EAIKNIRTQNTLSHLP--------QDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVIS 64
E I+ R Q++ P DV+V+E+K+ L+ + + + K + I+
Sbjct: 76 EVIEGYRAQHSHQRTPCKGGIRYSLDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKIN 135
Query: 65 PKNTRVSDLKRTIERQITMQMKRKGL 90
PKN DL++ I R+ TM++ +KG
Sbjct: 136 PKNYTDEDLEK-ITRRFTMELAKKGF 160
>gi|340370252|ref|XP_003383660.1| PREDICTED: glutamate dehydrogenase 1, mitochondrial [Amphimedon
queenslandica]
Length = 533
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 11 TKEAIKNIRTQNTLSHLP--------QDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIV 62
T E IK R Q++ P +VT +E+K+ L+ + M + K I
Sbjct: 105 TMEIIKAWRAQHSQHRTPCKGGIRFSDEVTEDEVKALATLMTFKCAMVDVPFGGAKGGIK 164
Query: 63 ISPKNTRVSDLKRTIERQITMQMKRKGL 90
I+P+ V +L+R I R+ TM++ +KG
Sbjct: 165 INPRKYSVKELER-ITRRFTMELAKKGF 191
>gi|355690386|gb|AER99136.1| glutamate dehydrogenase 1 [Mustela putorius furo]
Length = 427
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 13 EAIKNIRTQNTLSHLP--------QDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVIS 64
E I+ R Q++ P DV+V+E+K+ L+ + + + K + I+
Sbjct: 61 EVIEGYRAQHSQHRTPCKGGIRYSMDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKIN 120
Query: 65 PKNTRVSDLKRTIERQITMQMKRKGL 90
PKN ++L++ I R+ TM++ +KG
Sbjct: 121 PKNYTDNELEK-ITRRFTMELAKKGF 145
>gi|354484645|ref|XP_003504497.1| PREDICTED: dynein heavy chain 8, axonemal [Cricetulus griseus]
Length = 4730
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 8 LTETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPK 66
+ ET+EAI +++ LS LP D E+K+ + ++ H S+ ++ + + VIS
Sbjct: 4453 MGETREAIVYRLSEDMLSKLPPDYVPHEVKARLVKMGHLNSMNIFLRQEIDRMQRVISIL 4512
Query: 67 NTRVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 4513 RNSLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4564
>gi|325192079|emb|CCA26543.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 454
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 29 QDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKNTRVSDLKRTIERQITMQMKRK 88
+D+ +EI+ + ++ + MC +A +FD+ + + D K + T +
Sbjct: 233 EDILYKEIRHDDFRVNCLACMCPPKAFISEFDVTL----LKFGDHKPLLH---TDECTLC 285
Query: 89 GLSKQISWRHVWKSYWLSFDGIKLTNEKSLLSELGIESQCEITFVKRLKDKVR 141
G+S IS + +W+ Y L + + KSL+ + ++ QC +TF + L +K R
Sbjct: 286 GVSSAISHKSLWQRYGLVCEAN--SKSKSLVKQFHVKPQCRVTFSRNLDEKQR 336
>gi|14335450|gb|AAK60623.1|AF356522_1 axonemal dynein heavy chain 8 long form [Mus musculus]
Length = 4731
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSE-MELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP + E+K+ M++ H S+ ++ + + VIS +
Sbjct: 4456 ETREAIVYRLSEDMLSKLPPNYVPHEVKARLMKMGHLNSMNIFLRQEIDRMQKVISILRS 4515
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 4516 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4565
>gi|74223388|dbj|BAE21572.1| unnamed protein product [Mus musculus]
Length = 1060
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSE-MELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP + E+K+ M++ H S+ ++ + + VIS +
Sbjct: 785 ETREAIVYRLSEDMLSKLPPNYVPHEVKARLMKMGHLNSMNIFLRQEIDRMQKVISILRS 844
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 845 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 894
>gi|14335446|gb|AAK60621.1|AF356520_1 axonemal dynein heavy chain 8 long form [Mus musculus]
Length = 4731
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSE-MELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP + E+K+ M++ H S+ ++ + + VIS +
Sbjct: 4456 ETREAIVYRLSEDMLSKLPPNYVPHEVKARLMKMGHLNSMNIFLRQEIDRMQKVISILRS 4515
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 4516 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4565
>gi|153792273|ref|NP_038839.2| dynein heavy chain 8, axonemal [Mus musculus]
gi|341940471|sp|Q91XQ0.2|DYH8_MOUSE RecName: Full=Dynein heavy chain 8, axonemal; AltName: Full=Axonemal
beta dynein heavy chain 8; AltName: Full=Ciliary dynein
heavy chain 8
Length = 4731
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSE-MELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP + E+K+ M++ H S+ ++ + + VIS +
Sbjct: 4456 ETREAIVYRLSEDMLSKLPPNYVPHEVKARLMKMGHLNSMNIFLRQEIDRMQKVISILRS 4515
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 4516 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4565
>gi|395832640|ref|XP_003789366.1| PREDICTED: dynein heavy chain 8, axonemal [Otolemur garnettii]
Length = 4657
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+K+ + ++ H S+ ++ + + VIS +
Sbjct: 4382 ETREAIVYRLSEDMLSKLPPDYIPHEVKARLIKMGHLNSMNIFLRQEIDRMQKVISILRS 4441
Query: 69 RVSDLKRTIERQITMQMK-RKGLS-----------KQISWRHVWKSYWLS 106
+SDLK IE I M R L K++SW +W +
Sbjct: 4442 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQMWKRVSWDSSTLGFWFT 4491
>gi|359320913|ref|XP_532130.3| PREDICTED: dynein heavy chain 8, axonemal [Canis lupus familiaris]
Length = 4680
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+K+ + ++ H S+ ++ + + VIS +
Sbjct: 4405 ETREAIVYRLSEDMLSKLPPDYIPHEVKARLIKMGHLNSMNIFLRQEIDRMQKVISILRS 4464
Query: 69 RVSDLKRTIERQITMQMK-RKGLS-----------KQISWRHVWKSYWLS 106
+SDLK IE I M R L K++SW +W +
Sbjct: 4465 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQIWKRVSWDSSTLGFWFT 4514
>gi|281341844|gb|EFB17428.1| hypothetical protein PANDA_016218 [Ailuropoda melanoleuca]
Length = 4516
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+K+ + ++ H S+ ++ + + VIS +
Sbjct: 4241 ETREAIVYRLSEDMLSKLPPDYIPHEVKARLIKMGHLNSMNIFLRQEIDRMQKVISILRS 4300
Query: 69 RVSDLKRTIERQITMQMK-RKGLS-----------KQISWRHVWKSYWLS 106
+SDLK IE I M R L K++SW +W +
Sbjct: 4301 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQIWKRVSWDSSTLGFWFT 4350
>gi|37728244|gb|AAO45819.1| glutamate dehydrogenase 2 [synthetic construct]
Length = 510
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 13 EAIKNIRTQNTLSHLP--------QDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVIS 64
E I+ R Q++ P DV+V+E+K+ L+ + + + K + I+
Sbjct: 82 EVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKIN 141
Query: 65 PKNTRVSDLKRTIERQITMQMKRKGL 90
PKN ++L++ I R+ TM++ +KG
Sbjct: 142 PKNYTENELEK-ITRRFTMELAKKGF 166
>gi|297710934|ref|XP_002832115.1| PREDICTED: glutamate dehydrogenase 2, mitochondrial-like [Pongo
abelii]
gi|55976360|sp|Q64I00.1|DHE4_PONPY RecName: Full=Glutamate dehydrogenase 2, mitochondrial; Short=GDH
2; Flags: Precursor
gi|51451835|gb|AAU03134.1| glutamate dehydrogenase [Pongo pygmaeus]
Length = 558
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 13 EAIKNIRTQNTLSHLP--------QDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVIS 64
E I+ R Q++ P DV+V+E+K+ L+ + + + K + I+
Sbjct: 130 EVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKIN 189
Query: 65 PKNTRVSDLKRTIERQITMQMKRKGL 90
PKN ++L++ I R+ TM++ +KG
Sbjct: 190 PKNYTENELEK-ITRRFTMELAKKGF 214
>gi|57113899|ref|NP_001009004.1| glutamate dehydrogenase 2, mitochondrial precursor [Pan
troglodytes]
gi|55976358|sp|Q64HZ8.1|DHE4_PANTR RecName: Full=Glutamate dehydrogenase 2, mitochondrial; Short=GDH
2; Flags: Precursor
gi|51451840|gb|AAU03136.1| glutamate dehydrogenase [Pan troglodytes]
Length = 558
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 13 EAIKNIRTQNTLSHLP--------QDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVIS 64
E I+ R Q++ P DV+V+E+K+ L+ + + + K + I+
Sbjct: 130 EVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKIN 189
Query: 65 PKNTRVSDLKRTIERQITMQMKRKGL 90
PKN ++L++ I R+ TM++ +KG
Sbjct: 190 PKNYTENELEK-ITRRFTMELAKKGF 214
>gi|55976361|sp|Q64I01.1|DHE4_GORGO RecName: Full=Glutamate dehydrogenase 2, mitochondrial; Short=GDH
2; Flags: Precursor
gi|51451833|gb|AAU03133.1| glutamate dehydrogenase [Gorilla gorilla]
Length = 558
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 13 EAIKNIRTQNTLSHLP--------QDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVIS 64
E I+ R Q++ P DV+V+E+K+ L+ + + + K + I+
Sbjct: 130 EVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKIN 189
Query: 65 PKNTRVSDLKRTIERQITMQMKRKGL 90
PKN ++L++ I R+ TM++ +KG
Sbjct: 190 PKNYTENELEK-ITRRFTMELAKKGF 214
>gi|397505244|ref|XP_003823179.1| PREDICTED: glutamate dehydrogenase 2, mitochondrial-like [Pan
paniscus]
Length = 558
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 13 EAIKNIRTQNTLSHLP--------QDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVIS 64
E I+ R Q++ P DV+V+E+K+ L+ + + + K + I+
Sbjct: 130 EVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKIN 189
Query: 65 PKNTRVSDLKRTIERQITMQMKRKGL 90
PKN ++L++ I R+ TM++ +KG
Sbjct: 190 PKNYTENELEK-ITRRFTMELAKKGF 214
>gi|301782285|ref|XP_002926555.1| PREDICTED: dynein heavy chain 8, axonemal-like [Ailuropoda
melanoleuca]
Length = 4493
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+K+ + ++ H S+ ++ + + VIS +
Sbjct: 4218 ETREAIVYRLSEDMLSKLPPDYIPHEVKARLIKMGHLNSMNIFLRQEIDRMQKVISILRS 4277
Query: 69 RVSDLKRTIERQITMQMK-RKGLS-----------KQISWRHVWKSYWLS 106
+SDLK IE I M R L K++SW +W +
Sbjct: 4278 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQIWKRVSWDSSTLGFWFT 4327
>gi|291396152|ref|XP_002714707.1| PREDICTED: dynein, axonemal, heavy polypeptide 8 [Oryctolagus
cuniculus]
Length = 4755
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+K+ + ++ H S+ ++ + + VIS
Sbjct: 4480 ETREAIVYRLSEDMLSKLPPDYVPHEVKARLIKMGHLNSMNIFLRQEIDRMQKVISILRN 4539
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K++SW +W +
Sbjct: 4540 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4589
>gi|31377775|ref|NP_036216.2| glutamate dehydrogenase 2, mitochondrial precursor [Homo sapiens]
gi|13432152|sp|P49448.2|DHE4_HUMAN RecName: Full=Glutamate dehydrogenase 2, mitochondrial; Short=GDH
2; Flags: Precursor
gi|4156204|gb|AAD05030.1| glutamate dehydrogenase 2 precursor [Homo sapiens]
gi|29791811|gb|AAH50732.1| Glutamate dehydrogenase 2 [Homo sapiens]
gi|189066595|dbj|BAG36157.1| unnamed protein product [Homo sapiens]
Length = 558
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 13 EAIKNIRTQNTLSHLP--------QDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVIS 64
E I+ R Q++ P DV+V+E+K+ L+ + + + K + I+
Sbjct: 130 EVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKIN 189
Query: 65 PKNTRVSDLKRTIERQITMQMKRKGL 90
PKN ++L++ I R+ TM++ +KG
Sbjct: 190 PKNYTENELEK-ITRRFTMELAKKGF 214
>gi|31815|emb|CAA46995.1| glutamate dehydrogenase (NAD(P)+) [Homo sapiens]
gi|478988|gb|AAA20969.1| glutamate dehydrogenase [Homo sapiens]
Length = 558
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 13 EAIKNIRTQNTLSHLP--------QDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVIS 64
E I+ R Q++ P DV+V+E+K+ L+ + + + K + I+
Sbjct: 130 EVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKIN 189
Query: 65 PKNTRVSDLKRTIERQITMQMKRKGL 90
PKN ++L++ I R+ TM++ +KG
Sbjct: 190 PKNYTENELEK-ITRRFTMELAKKGF 214
>gi|410959128|ref|XP_003986164.1| PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain 8, axonemal [Felis
catus]
Length = 4721
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+K+ + ++ H S+ ++ + + VIS +
Sbjct: 4446 ETREAIVYRLSEDMLSKLPPDYIPHEVKARLIKMGHLNSMNIFLRQEIDRMQRVISILRS 4505
Query: 69 RVSDLKRTIERQITMQMK-RKGLS-----------KQISWRHVWKSYWLS 106
+SDLK IE I M R L K++SW +W +
Sbjct: 4506 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQIWKRVSWDSSTLGFWFT 4555
>gi|55976359|sp|Q64HZ9.1|DHE4_HYLLA RecName: Full=Glutamate dehydrogenase 2, mitochondrial; Short=GDH
2; Flags: Precursor
gi|51451837|gb|AAU03135.1| glutamate dehydrogenase [Hylobates lar]
Length = 555
Score = 36.2 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 13 EAIKNIRTQNTLSHLP--------QDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVIS 64
E I+ R Q++ P DV+V+E+K+ L+ + + + K + I+
Sbjct: 127 EVIEGYRAQHSQHRTPCKGGIRYSADVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKIN 186
Query: 65 PKNTRVSDLKRTIERQITMQMKRKGL 90
PKN ++L++ I R+ TM++ +KG
Sbjct: 187 PKNYTENELEK-ITRRFTMELAKKGF 211
>gi|395534078|ref|XP_003769075.1| PREDICTED: dynein heavy chain 8, axonemal, partial [Sarcophilus
harrisii]
Length = 2796
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI ++ LS LP D E+K+ + ++ H S+ ++ + + VI+
Sbjct: 2521 ETREAIVYRLAEDMLSKLPPDYIPHEVKARLIKMGHLNSMNIFLRQEIDRMQRVITRLRL 2580
Query: 69 RVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
+SDLK IE I M + L K+ISW +W +
Sbjct: 2581 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPALWKRISWDSSTLGFWFT 2630
>gi|291404111|ref|XP_002718403.1| PREDICTED: glutamate dehydrogenase 1-like [Oryctolagus cuniculus]
Length = 605
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 13 EAIKNIRTQNTLSHLP--------QDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVIS 64
E I+ R Q++ P DV+V+E+K+ L+ + + + K + I+
Sbjct: 177 EVIEGYRAQHSQHRTPCKGGIRYSMDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKIN 236
Query: 65 PKNTRVSDLKRTIERQITMQMKRKGL 90
PKN ++L++ I R+ TM++ +KG
Sbjct: 237 PKNYTDNELEK-ITRRFTMELAKKGF 261
>gi|432331556|ref|YP_007249699.1| Response regulator receiver domain protein,histidine kinase
[Methanoregula formicicum SMSP]
gi|432138265|gb|AGB03192.1| Response regulator receiver domain protein,histidine kinase
[Methanoregula formicicum SMSP]
Length = 473
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 8 LTETKEAIKNIRTQNTLSHLPQDVTVEEIKSEMELLHGQSIMCCIQADNKKFDIVISPKN 67
+TE K A + +R N +L +T +I+++++ L+G + I+ + + I K
Sbjct: 249 VTELKMAAEALRLSNHKLNLLSSITRHDIRNQIQALYGYFGILMIKLEGTPWLEYIL-KG 307
Query: 68 TRVSDLKRTIERQITMQMKRKGLSKQ-ISWRHVWKSYWLSFDGIKLTNEKSLLSELGIES 126
+V D TIERQI+ + +GL +Q +W+ V +S + + + + L G+E
Sbjct: 308 AQVVD---TIERQISFTKEYEGLGRQNPAWQSVARSIEGTVGSLPMREIQVTLKTGGLE- 363
Query: 127 QCEITFVKRLKDKV 140
F L DKV
Sbjct: 364 ----IFTDPLFDKV 373
>gi|338718422|ref|XP_001918195.2| PREDICTED: dynein heavy chain 8, axonemal [Equus caballus]
Length = 4722
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+K+ + ++ H S+ ++ + + VIS
Sbjct: 4447 ETREAIVYRLSEDMLSKLPPDYIPHEVKARLVKMGHLNSMNIFLRQEIDRMQKVISVLRN 4506
Query: 69 RVSDLKRTIERQITMQMK-RKGLS-----------KQISWRHVWKSYWLS 106
+SDLK IE I M R L K++SW +W +
Sbjct: 4507 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQIWKRVSWDSSTLGFWFT 4556
>gi|293344873|ref|XP_001079004.2| PREDICTED: dynein heavy chain 8, axonemal [Rattus norvegicus]
Length = 4690
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 8 LTETKEAIKNIRTQNTLSHLPQDVTVEEIKSE-MELLHGQSIMCCIQADNKKFDIVISPK 66
+ ET+EAI +++ LS LP + E+K+ M++ H S+ ++ + + VIS
Sbjct: 4413 MGETREAIVYRLSEDMLSKLPPNYVAHEVKARLMKMGHLNSMNIFLRQEIDRMQRVISLL 4472
Query: 67 NTRVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
++DLK IE I M + L K++SW +W +
Sbjct: 4473 RNSLNDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4524
>gi|149043539|gb|EDL96990.1| dynein, axonemal, heavy polypeptide 8 [Rattus norvegicus]
Length = 3046
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 8 LTETKEAIKNIRTQNTLSHLPQDVTVEEIKSE-MELLHGQSIMCCIQADNKKFDIVISPK 66
+ ET+EAI +++ LS LP + E+K+ M++ H S+ ++ + + VIS
Sbjct: 2769 MGETREAIVYRLSEDMLSKLPPNYVAHEVKARLMKMGHLNSMNIFLRQEIDRMQRVISLL 2828
Query: 67 NTRVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
++DLK IE I M + L K++SW +W +
Sbjct: 2829 RNSLNDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 2880
>gi|392355252|ref|XP_228058.6| PREDICTED: dynein heavy chain 8, axonemal [Rattus norvegicus]
Length = 4476
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 8 LTETKEAIKNIRTQNTLSHLPQDVTVEEIKSE-MELLHGQSIMCCIQADNKKFDIVISPK 66
+ ET+EAI +++ LS LP + E+K+ M++ H S+ ++ + + VIS
Sbjct: 4199 MGETREAIVYRLSEDMLSKLPPNYVAHEVKARLMKMGHLNSMNIFLRQEIDRMQRVISLL 4258
Query: 67 NTRVSDLKRTIERQITMQ------------MKRKGLSKQISWRHVWKSYWLS 106
++DLK IE I M + L K++SW +W +
Sbjct: 4259 RNSLNDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT 4310
>gi|311260358|ref|XP_001924974.2| PREDICTED: dynein heavy chain 8, axonemal [Sus scrofa]
Length = 4729
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+K+ + ++ H S+ ++ + + VIS
Sbjct: 4454 ETREAIVYRLSEDMLSKLPPDYIPHEVKARLIKMGHLNSMNIFLRQEIDRMQKVISILRG 4513
Query: 69 RVSDLKRTIERQITMQMK-RKGLS-----------KQISWRHVWKSYWLS 106
+SDLK IE I M R L K++SW +W +
Sbjct: 4514 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQIWKRVSWDSSTLGFWFT 4563
>gi|344264349|ref|XP_003404255.1| PREDICTED: dynein heavy chain 8, axonemal-like [Loxodonta africana]
Length = 4690
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+K+ + ++ H S+ ++ + + VI+ +
Sbjct: 4415 ETREAIVYRLSEDMLSKLPPDYVPHEVKARLIKMGHLNSMNIFLRQEIDRMQKVITILRS 4474
Query: 69 RVSDLKRTIERQITMQMK-RKGLS-----------KQISWRHVWKSYWLS 106
+SDLK IE I M R L K++SW +W +
Sbjct: 4475 SLSDLKLAIEGTIIMSENLRDALDNMYDARIPQIWKRVSWDSSTLGFWFT 4524
>gi|359078569|ref|XP_003587725.1| PREDICTED: dynein heavy chain 8, axonemal-like [Bos taurus]
Length = 4735
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 ETKEAIKNIRTQNTLSHLPQDVTVEEIKSEM-ELLHGQSIMCCIQADNKKFDIVISPKNT 68
ET+EAI +++ LS LP D E+K+ + ++ H S+ ++ + + VIS +
Sbjct: 4460 ETREAIVYRLSEDMLSKLPPDYVPHEVKARLIKMGHLNSMNIFLRQEIDRMQKVISILRS 4519
Query: 69 RVSDLKRTIERQITMQMK-RKGLS-----------KQISWRHVWKSYWLS 106
++DLK IE I M R L K++SW +W +
Sbjct: 4520 SLNDLKLAIEGTIIMSENLRDALDNMYDARIPQIWKRVSWDSSTLGFWFT 4569
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.131 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,929,095,953
Number of Sequences: 23463169
Number of extensions: 65999859
Number of successful extensions: 213836
Number of sequences better than 100.0: 230
Number of HSP's better than 100.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 213595
Number of HSP's gapped (non-prelim): 234
length of query: 143
length of database: 8,064,228,071
effective HSP length: 107
effective length of query: 36
effective length of database: 9,848,636,284
effective search space: 354550906224
effective search space used: 354550906224
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)