Query psy2974
Match_columns 186
No_of_seqs 243 out of 2059
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 22:20:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2974.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2974hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nt0_A MAsp2, mannose-binding 99.8 2.6E-20 8.8E-25 146.2 12.3 121 37-158 119-280 (286)
2 3dem_A Complement factor MAsp- 99.8 4.2E-20 1.4E-24 144.3 11.3 117 37-154 120-277 (278)
3 4aqb_A Mannan-binding lectin s 99.8 3E-18 1E-22 138.4 11.9 121 37-157 120-280 (361)
4 2wno_A Tumor necrosis factor-i 99.7 4.9E-16 1.7E-20 110.6 9.6 81 79-159 5-123 (149)
5 3poj_A Mannan-binding lectin s 99.6 5.8E-16 2E-20 105.4 7.7 75 80-154 3-115 (115)
6 1spp_A Major seminal plasma gl 99.5 7E-14 2.4E-18 94.3 8.6 73 79-157 4-108 (109)
7 1spp_B Major seminal plasma gl 99.5 1.2E-13 4.1E-18 94.1 8.9 75 79-158 7-113 (116)
8 1nzi_A Complement C1S componen 99.5 7.5E-14 2.6E-18 100.1 7.9 73 86-158 2-118 (159)
9 1sfp_A ASFP; spermadhesin, bov 99.5 2.9E-13 9.9E-18 91.9 9.3 75 78-157 7-113 (114)
10 4gz9_A Neuropilin-1, A5 protei 99.4 1.6E-13 5.4E-18 117.1 8.5 87 79-165 127-257 (577)
11 1szb_A Mannose binding lectin- 99.4 3.8E-13 1.3E-17 97.5 8.7 75 84-158 7-125 (170)
12 4aqb_A Mannan-binding lectin s 99.4 2E-13 6.9E-18 110.1 7.9 75 84-158 4-122 (361)
13 2qqm_A Neuropilin-1; VEGF rece 99.4 2.8E-13 9.7E-18 112.3 8.4 87 79-165 9-139 (450)
14 2qqo_A Neuropilin-2; VEGF rece 99.4 5.7E-13 1.9E-17 110.8 9.7 87 79-165 6-136 (460)
15 3kq4_B Cubilin; protein-protei 99.4 8.8E-13 3E-17 109.5 8.3 78 81-158 1-114 (457)
16 2qqk_A Neuropilin-2; VEGF rece 99.4 3.1E-12 1.1E-16 109.1 10.4 87 79-165 125-255 (579)
17 4gz9_A Neuropilin-1, A5 protei 99.3 2.6E-12 8.8E-17 109.6 9.5 79 79-157 7-125 (577)
18 3dem_A Complement factor MAsp- 99.3 1.9E-12 6.7E-17 100.7 8.0 76 83-158 3-122 (278)
19 1nt0_A MAsp2, mannose-binding 99.3 3.4E-12 1.1E-16 99.9 8.1 75 84-158 3-121 (286)
20 3kq4_B Cubilin; protein-protei 99.3 1.1E-11 3.8E-16 102.9 8.4 77 79-155 232-346 (457)
21 2qqk_A Neuropilin-2; VEGF rece 99.2 3.7E-11 1.3E-15 102.5 9.6 78 79-156 4-121 (579)
22 1lmj_A Fibrillin 1; EGF, calci 99.0 3.7E-10 1.3E-14 72.6 3.4 52 25-76 32-85 (86)
23 1kli_L Factor VIIA; extrinsic 98.8 1.4E-09 4.7E-14 66.8 2.9 44 35-78 2-46 (69)
24 1z6c_A Vitamin K-dependent pro 98.8 2.3E-09 7.7E-14 69.0 3.9 51 25-77 32-84 (87)
25 2w2n_E LDL receptor, low-densi 98.8 9.9E-10 3.4E-14 73.5 2.0 68 32-100 24-97 (107)
26 3v65_B Low-density lipoprotein 98.8 8.9E-10 3E-14 89.4 1.6 59 19-78 24-83 (386)
27 1x7a_L Coagulation factor IX, 98.8 6.8E-09 2.3E-13 73.2 5.8 70 4-78 48-126 (146)
28 2jkh_L Factor X light chain; p 98.8 3.2E-09 1.1E-13 62.3 2.6 41 38-78 1-41 (55)
29 3p5b_L Low density lipoprotein 98.8 3.8E-09 1.3E-13 86.1 3.9 52 25-78 28-79 (400)
30 1apq_A Complement protease C1R 98.8 5E-09 1.7E-13 60.9 3.1 42 36-77 2-51 (53)
31 1emn_A Fibrillin; extracellula 98.7 2E-08 7E-13 63.8 4.9 48 25-76 33-81 (82)
32 2wph_E Coagulation factor IXA 98.6 3.6E-08 1.2E-12 58.6 3.8 47 41-87 2-52 (59)
33 2w86_A Fibrillin-1, fibrillin1 98.6 1.8E-08 6.1E-13 71.0 2.6 53 24-77 94-147 (147)
34 2bou_A EGF-like module contain 98.6 8E-08 2.7E-12 67.3 5.6 94 8-102 5-129 (143)
35 1z6c_A Vitamin K-dependent pro 98.6 4.5E-08 1.5E-12 62.9 3.9 66 36-101 1-75 (87)
36 2w2n_E LDL receptor, low-densi 98.6 3E-08 1E-12 66.2 3.1 61 15-77 39-107 (107)
37 1uzk_A Fibrillin-1; glycoprote 98.6 3E-08 1E-12 71.0 3.3 53 25-77 109-162 (162)
38 1aut_L Activated protein C; se 98.5 1.2E-07 3.9E-12 64.0 5.3 59 16-78 25-94 (114)
39 1kig_L Factor XA; glycoprotein 98.5 3E-08 1E-12 57.1 1.7 38 41-78 1-38 (51)
40 1nfu_B Coagulation factor XA, 98.5 4.6E-08 1.6E-12 72.1 2.6 50 25-78 70-121 (195)
41 1dx5_I Thrombomodulin; serine 98.5 6.6E-08 2.2E-12 65.7 2.7 50 25-76 68-118 (118)
42 2vh0_B Activated factor XA lig 98.5 6.6E-08 2.3E-12 67.1 2.6 46 32-77 73-120 (134)
43 2bou_A EGF-like module contain 98.5 1E-07 3.4E-12 66.8 3.6 63 16-78 58-138 (143)
44 1emn_A Fibrillin; extracellula 98.4 2.2E-07 7.7E-12 58.9 4.7 66 34-102 1-75 (82)
45 2bz6_L Blood coagulation facto 98.4 9.5E-08 3.2E-12 55.5 2.5 38 41-78 2-40 (53)
46 3v65_B Low-density lipoprotein 98.4 4.4E-08 1.5E-12 79.4 0.8 73 36-108 1-82 (386)
47 3h5c_B Vitamin K-dependent pro 98.4 5.8E-07 2E-11 70.9 7.1 70 4-78 5-84 (317)
48 3m0c_C LDL receptor, low-densi 98.4 1.6E-07 5.4E-12 82.8 3.3 52 25-78 340-391 (791)
49 3p5b_L Low density lipoprotein 98.3 6.1E-07 2.1E-11 73.0 5.8 62 39-101 1-69 (400)
50 1n7d_A LDL receptor, low-densi 98.3 3.6E-07 1.2E-11 79.5 4.6 52 25-78 322-373 (699)
51 1lmj_A Fibrillin 1; EGF, calci 98.3 4.7E-07 1.6E-11 57.8 3.9 67 36-102 1-78 (86)
52 1yo8_A Thrombospondin-2; EGF, 98.3 6.8E-07 2.3E-11 76.5 5.9 82 25-108 33-145 (634)
53 2c4f_L Coagulation factor VII 98.3 6.6E-07 2.2E-11 62.6 4.2 69 4-77 47-128 (142)
54 1x7a_L Coagulation factor IX, 98.2 1.6E-06 5.4E-11 61.0 4.4 75 32-112 42-129 (146)
55 1szb_A Mannose binding lectin- 98.2 9E-07 3.1E-11 63.7 2.8 52 24-78 113-167 (170)
56 2vj3_A Neurogenic locus notch 98.1 4.2E-06 1.4E-10 57.9 6.0 94 4-102 5-114 (135)
57 1z1y_A Ookinete surface protei 98.1 5.9E-07 2E-11 65.6 1.6 83 25-108 32-135 (186)
58 3f1s_B Vitamin K-dependent pro 98.0 2.7E-06 9.1E-11 66.1 2.8 48 37-84 1-52 (283)
59 1aut_L Activated protein C; se 97.9 4.9E-06 1.7E-10 55.9 2.9 79 34-112 2-97 (114)
60 2kl7_A Fibulin-4; secreted, ca 97.9 7.8E-06 2.7E-10 50.2 3.5 41 36-76 1-44 (71)
61 1dx5_I Thrombomodulin; serine 97.9 7.1E-06 2.4E-10 55.5 3.6 89 3-101 3-109 (118)
62 3v64_C Agrin; beta propeller, 97.8 4.4E-06 1.5E-10 66.7 1.8 40 38-78 1-40 (349)
63 1nzi_A Complement C1S componen 97.8 6.9E-06 2.3E-10 58.2 2.6 51 24-77 106-157 (159)
64 4d90_A EGF-like repeat and dis 97.8 2E-05 6.8E-10 54.8 4.4 40 25-68 87-127 (143)
65 1nfu_B Coagulation factor XA, 97.8 2.5E-06 8.7E-11 62.7 -0.4 73 33-111 37-123 (195)
66 1edm_B Factor IX; epidermal gr 97.8 1.6E-05 5.3E-10 42.8 2.7 36 37-76 2-37 (39)
67 2c4f_L Coagulation factor VII 97.8 1.3E-05 4.5E-10 55.9 3.0 72 34-111 43-131 (142)
68 3m0c_C LDL receptor, low-densi 97.8 2.1E-05 7.2E-10 69.4 4.7 64 37-101 311-381 (791)
69 1n7d_A LDL receptor, low-densi 97.7 2.1E-05 7.1E-10 68.5 3.8 64 37-101 293-363 (699)
70 1uzk_A Fibrillin-1; glycoprote 97.7 3.3E-06 1.1E-10 60.2 -1.2 97 4-102 3-154 (162)
71 2vj3_A Neurogenic locus notch 97.6 0.0001 3.6E-09 50.7 5.4 64 5-77 46-118 (135)
72 1z1y_A Ookinete surface protei 97.6 4.2E-05 1.4E-09 55.6 3.2 46 25-73 123-174 (186)
73 3u7u_G Neuregulin 1; signaling 97.6 6.7E-05 2.3E-09 43.5 3.4 38 36-77 6-48 (55)
74 2vh0_B Activated factor XA lig 97.6 9.3E-06 3.2E-10 56.1 -0.4 77 32-110 36-122 (134)
75 1yo8_A Thrombospondin-2; EGF, 97.5 0.00012 3.9E-09 62.9 6.1 45 31-77 95-145 (634)
76 1ijq_A LDL receptor, low-densi 97.4 9.2E-05 3.1E-09 58.0 3.3 42 36-77 265-315 (316)
77 2k2s_B Micronemal protein 6; m 97.3 7.1E-05 2.4E-09 44.4 1.7 35 34-68 7-43 (61)
78 1gl4_A Nidogen-1, entactin; im 97.3 5.4E-05 1.8E-09 58.5 1.5 41 36-78 3-45 (285)
79 4d90_A EGF-like repeat and dis 97.3 0.00018 6.3E-09 49.8 4.0 66 37-106 51-132 (143)
80 4a0p_A LRP6, LRP-6, low-densit 97.3 0.00012 4.1E-09 63.0 2.8 42 37-78 264-306 (628)
81 3sov_A LRP-6, low-density lipo 97.2 0.0002 6.9E-09 56.3 3.2 43 37-79 266-310 (318)
82 1egf_A Epidermal growth factor 97.2 0.0003 1E-08 40.3 3.1 37 37-77 2-43 (53)
83 3s94_A LRP-6, low-density lipo 97.2 0.00016 5.6E-09 62.0 2.7 41 37-77 577-617 (619)
84 1tpg_A T-plasminogen activator 97.1 0.00021 7.1E-09 45.9 1.9 50 52-101 25-80 (91)
85 2w86_A Fibrillin-1, fibrillin1 97.1 0.00032 1.1E-08 48.9 2.9 40 36-77 2-42 (147)
86 1tpg_A T-plasminogen activator 96.9 0.00062 2.1E-08 43.6 3.0 40 34-77 42-85 (91)
87 3h5c_B Vitamin K-dependent pro 96.9 0.0005 1.7E-08 53.9 2.8 66 36-101 3-74 (317)
88 1k36_A Epiregulin; EGF-like fo 96.6 0.0014 4.9E-08 36.3 2.4 37 37-77 2-42 (46)
89 1a3p_A Epidermal growth factor 96.5 0.0027 9.2E-08 34.9 3.3 24 50-77 15-40 (45)
90 1kig_L Factor XA; glycoprotein 96.3 0.0036 1.2E-07 35.5 3.1 34 9-42 9-43 (51)
91 3v64_C Agrin; beta propeller, 95.9 0.0038 1.3E-07 49.5 2.9 41 37-78 303-343 (349)
92 2vj2_A Jagged-1; signalling, p 95.9 0.0052 1.8E-07 43.8 3.1 67 25-102 90-164 (169)
93 2jkh_L Factor X light chain; p 95.9 0.0026 9E-08 36.6 1.2 19 25-43 29-47 (55)
94 3s94_A LRP-6, low-density lipo 95.8 0.0047 1.6E-07 53.0 3.1 42 37-78 271-314 (619)
95 1hae_A Heregulin-alpha; growth 95.6 0.0051 1.7E-07 36.4 1.8 35 39-77 7-46 (63)
96 2wph_E Coagulation factor IXA 95.5 0.0086 2.9E-07 35.0 2.4 27 25-56 28-54 (59)
97 2bz6_L Blood coagulation facto 95.2 0.0062 2.1E-07 34.8 1.2 18 25-42 28-45 (53)
98 4a0p_A LRP6, LRP-6, low-densit 94.4 0.022 7.6E-07 48.9 3.1 41 37-77 578-619 (628)
99 1kli_L Factor VIIA; extrinsic 93.5 0.015 5E-07 35.1 0.2 19 25-43 34-52 (69)
100 1g1s_A P-selectin; selectin, l 93.5 0.05 1.7E-06 38.0 3.0 36 38-77 119-154 (162)
101 1n1i_A Merozoite surface prote 92.6 0.19 6.6E-06 32.6 4.5 59 7-68 13-84 (105)
102 1nql_B Epidermal growth factor 92.1 0.097 3.3E-06 29.6 2.3 24 50-77 18-43 (53)
103 1q4g_A Prostaglandin G/H synth 91.9 0.091 3.1E-06 44.4 3.0 36 38-77 2-39 (553)
104 3nt1_A Prostaglandin-endoperox 90.6 0.14 4.7E-06 43.6 2.8 36 38-77 1-38 (587)
105 1ob1_C Major merozoite surface 88.0 0.73 2.5E-05 29.6 4.1 42 25-68 33-83 (99)
106 3ca7_A Protein spitz; argos, E 87.9 0.25 8.6E-06 27.6 1.8 24 50-77 20-47 (52)
107 4fbr_A Lectin, myxobacterial h 87.7 0.055 1.9E-06 41.4 -1.5 38 31-68 92-129 (267)
108 3ltf_D Protein spitz; receptor 81.8 0.76 2.6E-05 26.4 1.9 24 50-77 20-47 (58)
109 1g1t_A E-selectin; EGF, adhesi 77.7 1.4 4.8E-05 30.1 2.5 24 50-77 131-154 (157)
110 2wg3_C Hedgehog-interacting pr 77.3 0.61 2.1E-05 38.5 0.7 56 33-102 388-450 (463)
111 3cfw_A L-selectin; EGF, cell a 73.6 2.2 7.5E-05 29.4 2.7 25 49-77 130-154 (164)
112 2ygq_A WIF-1, WNT inhibitory f 72.4 14 0.00049 28.7 7.4 42 25-81 172-215 (324)
113 4fbr_A Lectin, myxobacterial h 71.7 0.41 1.4E-05 36.5 -1.6 42 32-77 160-201 (267)
114 2rnl_A Amphiregulin; AR, color 68.6 7.8 0.00027 21.4 3.7 24 50-77 23-48 (50)
115 3asi_A Neurexin-1-alpha; beta- 66.4 4.3 0.00015 32.5 3.3 35 39-77 186-221 (410)
116 2gy5_A Angiopoietin-1 receptor 63.7 6.3 0.00022 32.0 3.8 14 55-68 259-272 (423)
117 1iox_A Betacellulin; EGF-like 63.7 3.9 0.00013 22.6 1.8 23 51-77 20-44 (50)
118 3f1s_B Vitamin K-dependent pro 63.5 7.6 0.00026 29.3 4.1 32 11-42 16-48 (283)
119 1b9w_A Protein (merozoite surf 62.3 7.9 0.00027 24.4 3.2 59 7-68 7-79 (95)
120 2ygo_A WIF-1, WNT inhibitory f 60.2 4.3 0.00015 29.1 1.9 27 47-77 150-179 (188)
121 3fcs_B Integrin beta-3; beta p 52.5 19 0.00064 31.3 5.0 42 25-78 552-600 (690)
122 1xdt_R Hbegf, heparin-binding 51.9 9.9 0.00034 23.2 2.3 23 51-77 52-76 (79)
123 3e50_C Protransforming growth 49.3 8.2 0.00028 21.3 1.5 23 51-77 20-44 (50)
124 2fd6_A Urokinase-type plasmino 47.2 12 0.00042 24.6 2.4 19 50-68 7-28 (122)
125 3fcs_B Integrin beta-3; beta p 44.3 12 0.00043 32.4 2.6 29 40-68 436-467 (690)
126 3ssb_I IMPI alpha, inducible m 43.8 12 0.00042 18.5 1.5 16 61-77 7-22 (32)
127 1e0f_I Haemadin, factor IIA; c 41.5 25 0.00086 18.9 2.6 32 52-85 10-41 (57)
128 1gl4_A Nidogen-1, entactin; im 40.6 4.4 0.00015 31.1 -0.7 32 16-49 18-57 (285)
129 3qcw_A Neurexin-1-alpha; synap 38.5 18 0.00062 33.5 2.9 36 39-78 1018-1054(1245)
130 4b2u_A S67; toxin, ICK; NMR {S 38.1 34 0.0012 16.6 2.6 29 33-61 2-33 (36)
131 3qcw_A Neurexin-1-alpha; synap 37.9 22 0.00075 32.9 3.3 36 38-77 619-655 (1245)
132 2ygq_A WIF-1, WNT inhibitory f 34.8 25 0.00086 27.3 2.8 11 58-68 164-174 (324)
133 2p28_B Integrin beta-2; hybrid 31.8 26 0.00089 25.6 2.3 38 32-77 170-213 (217)
134 2i9a_A Urokinase-type plasmino 28.7 33 0.0011 23.3 2.3 24 50-77 19-45 (145)
135 2p3f_N Anti-coagulant protein 26.4 31 0.0011 20.7 1.6 18 60-77 48-65 (78)
136 1ccv_A AMCI, chymotrypsin inhi 24.2 34 0.0012 18.9 1.4 25 47-77 27-51 (56)
137 3k6s_B Integrin beta-2; cell r 22.4 42 0.0014 29.1 2.2 41 25-77 545-591 (687)
138 4aqs_A Laminin subunit beta-1; 20.8 89 0.0031 25.8 3.9 12 57-68 458-469 (525)
139 3zyj_B Netrin-G1; cell adhesio 20.2 22 0.00074 28.9 0.0 25 51-82 378-402 (426)
No 1
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=99.84 E-value=2.6e-20 Score=146.21 Aligned_cols=121 Identities=30% Similarity=0.620 Sum_probs=103.9
Q ss_pred ccccccccc---cCcccccccCCCceEEEecCCeeeeccccccccCCccee-ecCCCCcccCCCCCCCCCCCCceEEEEE
Q psy2974 37 DKDECMTNN---GGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYE-ITAPNGVIKTPNHPDYYPSKRECIWHFT 112 (186)
Q Consensus 37 d~~eC~~~~---~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~~~C~~~-~~~~~G~i~sp~~p~~y~~~~~C~w~i~ 112 (186)
+.++|...+ ..|.+.|.|..|+|.|.|.+||.+..+...|. ..|++. ++...|.|.||+||+.|+++..|.|.|.
T Consensus 119 ~~~~C~~~~~~~~~c~~~C~n~~g~~~csC~~Gy~L~~d~~~C~-~~Cg~~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~ 197 (286)
T 1nt0_A 119 DVDECRTSLGDSVPCDHYCHXYLGGYYCSCRVGYILHQNKHTCS-ALCSGQVFTGRSGFLSSPEYPQPYPKLSSCAYNIR 197 (286)
T ss_dssp ECCTTC-------CCSSEEEEETTEEEEECCTTEEECTTSSCEE-ECCEEEEECSSSEEEECTTTTSCCCSSCEEEEEEE
T ss_pred cCCccCCCCCCcccCCCccccccCceEeecCCCceeccCCCCcc-ccccCceecCCceEEeCCCCCCCCCCCCEEEEEEE
Confidence 456676432 25899999999999999999999999999996 579887 7888999999999999999999999999
Q ss_pred cCCCCEEEeccC-------------------------------------ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEE
Q psy2974 113 TTPGHRIKLNPT-------------------------------------DIISISEGLLVRFRSDDTVVGKGFSASYIAI 155 (186)
Q Consensus 113 ~~~g~~i~l~~~-------------------------------------~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~ 155 (186)
+++|++|.|.|. .++|.++.|+|.|+||.++.++||+|.|++.
T Consensus 198 ~~~g~~I~l~f~~~f~le~~~~~~C~~D~l~i~dg~~~~~~~CG~~~p~~~~S~~n~l~i~F~sd~~~~~~GF~~~y~~~ 277 (286)
T 1nt0_A 198 LEEGFSITLDFVESFDVEMHPEAQCPYDSLKIQTDKREYGPFCGKTLPPRIETDSNKVTITFTTDESGNHTGWKIHYTST 277 (286)
T ss_dssp CCSSCEEEEEECSCCBBCCC----C--CEEEEECSSCEEEEECBSSCCCCEECSSSEEEEEEECCSCCCCCBCEEEEEEE
T ss_pred CCCceEEEEEEeceEEeccCCCCCCCCcEEEEEeCCcceEEEcCCCCCCCEEeeCCEEEEEEEeCCCCCCCCEEEEEEEe
Confidence 999999999873 1567889999999999999999999999987
Q ss_pred eCC
Q psy2974 156 DTQ 158 (186)
Q Consensus 156 ~~~ 158 (186)
..+
T Consensus 278 ~~~ 280 (286)
T 1nt0_A 278 AQP 280 (286)
T ss_dssp C--
T ss_pred cCc
Confidence 655
No 2
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=99.82 E-value=4.2e-20 Score=144.31 Aligned_cols=117 Identities=36% Similarity=0.739 Sum_probs=102.0
Q ss_pred ccccccccc---cCcccccccCCCceEEEecCCeeeeccccccccCCccee-ecCCCCcccCCCCCCCCCCCCceEEEEE
Q psy2974 37 DKDECMTNN---GGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYE-ITAPNGVIKTPNHPDYYPSKRECIWHFT 112 (186)
Q Consensus 37 d~~eC~~~~---~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~~~C~~~-~~~~~G~i~sp~~p~~y~~~~~C~w~i~ 112 (186)
+.++|.... ..|.+.|.+..+++.|.|.+||.+..+...|. ..|++. ++...|.|.||+||+.|+++..|.|.|.
T Consensus 120 ~~~~C~~~~~~~~~c~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~-~~Cgg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~i~ 198 (278)
T 3dem_A 120 DVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCR-VECSDNLFTQRTGVITSPDFPNPYPKSSECLYTIE 198 (278)
T ss_dssp ECCTTTC-----CCCSSEEEEETTEEEEECCTTCEECTTSSCEE-CCCCCCCBCSSEEEEESTTTTSCCCSSCEEEEEEE
T ss_pred ccccCCCCCCCcccCCcCcCCccCCcEEEeCCcceeccCCCCCc-ccCCCceecCCccceeCCCCCCCCCCcCeEEEEEE
Confidence 556676432 37889999999999999999999999999997 578865 5778899999999999999999999999
Q ss_pred cCCCCEEEeccCc-------------------------------------eeeeCCeEEEEEEeCCCCCCCCcEEEEEE
Q psy2974 113 TTPGHRIKLNPTD-------------------------------------IISISEGLLVRFRSDDTVVGKGFSASYIA 154 (186)
Q Consensus 113 ~~~g~~i~l~~~~-------------------------------------~~s~~~~l~i~f~sd~~~~~~GF~~~y~~ 154 (186)
++++++|.|.|.+ ++|.++.|+|.|+||.+...+||+|+|++
T Consensus 199 ~~~g~~i~l~f~~~f~le~~~~~~C~~D~l~i~dg~~~~~~~CG~~~p~~~~s~~~~l~v~F~sd~~~~~~GF~~~y~~ 277 (278)
T 3dem_A 199 LEEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPKVLGPFCGEKAPEPISTQSHSVLILFHSDNSGENRGWRLSYRA 277 (278)
T ss_dssp CCTTCCEEEEECSCCBBCCCSSSSSSSCEEEEEETTEEEEEECBSSCCCCEECSCSEEEEEEECCSSCCCCBCEEEEEE
T ss_pred eCCCcEEEEEEccccccccCCCCCCCCCEEEEecCCcccccccCCCCCCCEEEcCCEEEEEEEECCCCCcCCEEEEEEE
Confidence 9999999987642 46778999999999999999999999986
No 3
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=99.77 E-value=3e-18 Score=138.45 Aligned_cols=121 Identities=33% Similarity=0.663 Sum_probs=106.6
Q ss_pred ccccccc---cccCcccccccCCCceEEEecCCeeeeccccccccCCcceeecCCCCcccCCCCCCCCCCCCceEEEEEc
Q psy2974 37 DKDECMT---NNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTT 113 (186)
Q Consensus 37 d~~eC~~---~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~ 113 (186)
+.++|.. ....|.+.|.+..+++.|.|..||.+..+...|....|+..++...|.|.||+||..|+++..|.|.|.+
T Consensus 120 ~~~~c~~~~~~~~~~~~~c~n~~g~~~csC~~g~~l~~~~~~~~~~~c~~~~~~~~G~i~SP~yP~~Yp~~~~C~w~i~~ 199 (361)
T 4aqb_A 120 DVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSDNLFTQRTGVITSPDFPNPYPKSSECLYTIEL 199 (361)
T ss_dssp ECCGGGTGGGSSSCCSSEEEEETTEEEEECCTTCEECTTSSCEECCCCCCCBCSSEEEEESTTTTSCCCSSCEEEEEEEC
T ss_pred cccccccccccCCCCCccCCccCCCceeccCCCeEEeccccccccccccceEeCCCcEEecCCCCCCCCCCceeeEEeee
Confidence 3455543 2346889999999999999999999999988888777888889999999999999999999999999999
Q ss_pred CCCCEEEeccC-------------------------------------ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEEe
Q psy2974 114 TPGHRIKLNPT-------------------------------------DIISISEGLLVRFRSDDTVVGKGFSASYIAID 156 (186)
Q Consensus 114 ~~g~~i~l~~~-------------------------------------~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~ 156 (186)
++|++|.|.|. .+.|.++.|+|+|+||.+..++||+|+|+++.
T Consensus 200 ~~g~~i~l~f~~~~~~e~~~~~~C~~D~l~i~dg~~~~~~~cG~~~p~~~~s~~n~~~i~F~SD~~~~~~GF~~~y~~~~ 279 (361)
T 4aqb_A 200 EEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPKVLGPFCGEKAPEPISTQSHSVLILFHSDNSGENRGWRLSYRAAG 279 (361)
T ss_dssp CTTCEEEEEECSCCBBCCCSSSSSSSSEEEEEETTEEEEEECBSSCCCCEECSCSEEEEEEECCSCCCCCBCEEEEEEEC
T ss_pred ccCcEEEEEEeecccccCCccCccCCCeEEEeeCCeeEEeeCCCCCCCCEeecCCeEEEEEEeCCCCCccceEEEEEEcc
Confidence 99999999853 25778899999999999999999999999875
Q ss_pred C
Q psy2974 157 T 157 (186)
Q Consensus 157 ~ 157 (186)
.
T Consensus 280 ~ 280 (361)
T 4aqb_A 280 N 280 (361)
T ss_dssp C
T ss_pred C
Confidence 3
No 4
>2wno_A Tumor necrosis factor-inducible gene 6 protein; glycoprotein, cell adhesion, extracellular matrix; 2.30A {Homo sapiens}
Probab=99.66 E-value=4.9e-16 Score=110.62 Aligned_cols=81 Identities=33% Similarity=0.640 Sum_probs=72.7
Q ss_pred CCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC----------------------------------
Q psy2974 79 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT---------------------------------- 124 (186)
Q Consensus 79 ~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~---------------------------------- 124 (186)
..|++.++...|.|.||+||+.|+++..|.|.|.++++++|+|.|.
T Consensus 5 ~~Cgg~l~~~~G~i~SP~yP~~Yp~n~~C~W~I~~~~g~~I~L~F~~f~le~~~~C~~D~l~I~dg~~~~~~~~~~~CG~ 84 (149)
T 2wno_A 5 KECGGVFTDPKQIFKSPGFPNEYEDNQICYWHIRLKYGQRIHLSFLDFDLEDDPGCLADYVEIYDSYDDVHGFVGRYCGD 84 (149)
T ss_dssp SCCCEEECSSEEEEECTTTTSCCCTTCEEEEEEECCTTCEEEEEEEEEECCCCTTCCSSEEEEESSSSSSSSEEEEECSS
T ss_pred CCCCCEEECCceEEECCCCCcCCCCCCEEEEEEEECCCCEEEEEEEEEEecCCCCCCCCEEEEecCCCCCcceeeeEcCC
Confidence 4689999988999999999999999999999999999999999853
Q ss_pred ----ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEEeCCC
Q psy2974 125 ----DIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQG 159 (186)
Q Consensus 125 ----~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~~~ 159 (186)
.++|.++.|+|.|+||.+...+||+|.|+++....
T Consensus 85 ~~p~~~~S~~n~l~v~F~Sd~~~~~~GF~a~y~~~~~~~ 123 (149)
T 2wno_A 85 ELPDDIISTGNVMTLKFLSDASVTAGGFQIKYVAMDPVS 123 (149)
T ss_dssp SCCCCEECSSSEEEEEEECCSSCCCCEEEEEEEEECC--
T ss_pred CCCCCEEEeCCEEEEEEEECCCCCCCCEEEEEEEECCCc
Confidence 26788999999999999999999999999987663
No 5
>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding site, complex with ethylamine, COMP protein, lectin pathway of complement; 1.45A {Rattus norvegicus} PDB: 3pob_A 3pof_A 3pog_A 3poi_A 3poe_A
Probab=99.64 E-value=5.8e-16 Score=105.43 Aligned_cols=75 Identities=31% Similarity=0.578 Sum_probs=67.3
Q ss_pred Ccceee-cCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccCc---------------------------------
Q psy2974 80 GCKYEI-TAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPTD--------------------------------- 125 (186)
Q Consensus 80 ~C~~~~-~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~~--------------------------------- 125 (186)
.|++.+ +...|.|.||+||..|+++..|.|.|.++++++|+|.|.+
T Consensus 3 ~Cgg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~i~l~f~d~f~le~~~~~~C~~D~l~i~dg~~~~~~~CG~~ 82 (115)
T 3poj_A 3 ECSGNLFTQRTGTITSPDYPNPYPKSSECSYTIDLEEGFMVTLQFEDIFDIEDHPEVPCPYDYIKIKAGSKVWGPFCGEK 82 (115)
T ss_dssp CEEEEEECSSEEEEECTTTTSCCCTTCEEEEEEECCTTCCCEEEECSCCBBCCCSSSSSCSCEEEEEETTEEEEEECBSS
T ss_pred ECCCceEcCCCEEEcCCCCCcCCcCCCeEEEEEEcCCCCEEEEEEecceecccCCCCCCCCeEEEEEcCCcccccCcCCC
Confidence 587774 7788999999999999999999999999999999888651
Q ss_pred ----eeeeCCeEEEEEEeCCCCCCCCcEEEEEE
Q psy2974 126 ----IISISEGLLVRFRSDDTVVGKGFSASYIA 154 (186)
Q Consensus 126 ----~~s~~~~l~i~f~sd~~~~~~GF~~~y~~ 154 (186)
++|.++.|+|.|+||.+..++||+|+|++
T Consensus 83 ~p~~~~s~~~~l~i~F~Sd~~~~~~GF~~~y~a 115 (115)
T 3poj_A 83 SPEPISTQSHSIQILFRSDNSGENRGWRLSYRA 115 (115)
T ss_dssp CCCCEECCCSEEEEEEECCSSCCCCBCEEEEEC
T ss_pred CCCCEEecCCEEEEEEEcCCCCCCCCEEEEEEC
Confidence 46778999999999999999999999974
No 6
>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1
Probab=99.51 E-value=7e-14 Score=94.26 Aligned_cols=73 Identities=19% Similarity=0.360 Sum_probs=65.0
Q ss_pred CCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC--------------------------------ce
Q psy2974 79 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT--------------------------------DI 126 (186)
Q Consensus 79 ~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~--------------------------------~~ 126 (186)
..|++.++...|.|.|| |+++..|.|.|.+++|++|.|.|. .+
T Consensus 4 ~~Cgg~l~~~~G~i~SP-----Yp~~~~C~w~I~~~~g~~I~l~f~~f~l~C~~D~l~I~dg~~~~~~~~~~CG~~p~~~ 78 (109)
T 1spp_A 4 HACGGRLTDDYGTIFTY-----KGPKTECVWTLQVDPKYKLLVSIPTLNLTCGKEYVEVLEGAPGSKSLGKFCEGLSILN 78 (109)
T ss_dssp CSSCEEEECSEEEEECC-----CSSCSEEEEEEECCTTSEEEEEEEEEECCTTTEEEEEESSSTTSCEEEEESEEEEEEE
T ss_pred cCCCCEEeCCcEEEeCC-----CCCCCcEEEEEEcCCCCEEEEEEeeeeccCCCCEEEEEeCCCCCchhhhhhCCCCCCE
Confidence 46999999889999997 788999999999999999999854 24
Q ss_pred eeeCCeEEEEEEeCCCCCCCCcEEEEEEEeC
Q psy2974 127 ISISEGLLVRFRSDDTVVGKGFSASYIAIDT 157 (186)
Q Consensus 127 ~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~ 157 (186)
+| ++.|+|.|+||.+...+||+|.|++.+.
T Consensus 79 ~S-~n~l~v~F~Sd~~~~~~GF~~~y~~~~~ 108 (109)
T 1spp_A 79 RG-SSGMTVKYKRDSGHPASPYEIIFLRDSQ 108 (109)
T ss_dssp EE-CTTCEEEEEECTTCCCCCCEEEEEEECC
T ss_pred EE-CCEEEEEEEeCCCCCCCCEEEEEEEeCC
Confidence 67 9999999999999999999999998754
No 7
>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1
Probab=99.49 E-value=1.2e-13 Score=94.14 Aligned_cols=75 Identities=13% Similarity=0.321 Sum_probs=66.4
Q ss_pred CCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC--------------------------------ce
Q psy2974 79 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT--------------------------------DI 126 (186)
Q Consensus 79 ~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~--------------------------------~~ 126 (186)
..|++.++...|.|.|| |+++..|.|.|.+++|++|.|.|. .+
T Consensus 7 ~~Cgg~l~~~~G~i~SP-----Yp~~~~C~w~I~~~~g~~I~l~f~~f~l~C~~D~l~i~dg~~~~~~~~~~CG~~p~~~ 81 (116)
T 1spp_B 7 DECGRVIKDTSGSISNT-----DRQKNLCTWTILMKPDQKVRMAIPYLNLACGKEYVEVFDGLLSGPSYGKLCAGAAIVF 81 (116)
T ss_dssp GGTTEEECCSEEEEECC-----SSCCSEEEEEEECCTTCEEEEEEEEEECCBTTEEEEEESSSTTSCEEEEESEEEEEEE
T ss_pred CCCCCEEeCCceEEeCC-----CcCCCCEEEEEEeCCCCEEEEEEeeCcccCCCCEEEEEcCCCCCcccccccCcCCCCE
Confidence 45899998888999998 778999999999999999999853 25
Q ss_pred eeeCCeEEEEEEeCCCCCCCCcEEEEEEEeCC
Q psy2974 127 ISISEGLLVRFRSDDTVVGKGFSASYIAIDTQ 158 (186)
Q Consensus 127 ~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~~ 158 (186)
+|.++.|+|.|+||.+..++||+|.|++++..
T Consensus 82 ~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~~~~ 113 (116)
T 1spp_B 82 LSTANTMTIKYNRISGNSSSPFLIYFYGSSPG 113 (116)
T ss_dssp ECSSSEEEEEEEESSCSCCCCCEEEEEEECC-
T ss_pred EecCCEEEEEEEECCCCCCCCEEEEEEEeCCC
Confidence 67899999999999999999999999998754
No 8
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=99.49 E-value=7.5e-14 Score=100.09 Aligned_cols=73 Identities=34% Similarity=0.465 Sum_probs=64.7
Q ss_pred cCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC-----------------------------------------
Q psy2974 86 TAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT----------------------------------------- 124 (186)
Q Consensus 86 ~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~----------------------------------------- 124 (186)
+...|.|.||+||+.|+++..|.|.|.++++++|.|.|.
T Consensus 2 ~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~~C~~D~l~i~dg~~~~~~~CG~~~~~~~~~P~~ 81 (159)
T 1nzi_A 2 PTMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEEGRLCGQRSSNNPHSPIV 81 (159)
T ss_dssp CCSEEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCGGGCSSEEEEEC---CCEEECSEECCCCSSCCCS
T ss_pred CCCCEEEECCCCccCCCCCCCEEEEEEeCCCCEEEEEEeEEEecCCCCCCCCEEEEEeCCchhcccCCCCCCCcccCCcc
Confidence 456799999999999999999999999999999998742
Q ss_pred -ceeeeCCeEEEEEEeCCCCCC--CCcEEEEEEEeCC
Q psy2974 125 -DIISISEGLLVRFRSDDTVVG--KGFSASYIAIDTQ 158 (186)
Q Consensus 125 -~~~s~~~~l~i~f~sd~~~~~--~GF~~~y~~~~~~ 158 (186)
.++|.++.|+|.|+||.+... +||+|.|.+++.+
T Consensus 82 ~~~~S~~n~l~v~F~Sd~~~~~~~~GF~~~y~~~d~~ 118 (159)
T 1nzi_A 82 EEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATDIN 118 (159)
T ss_dssp EEEEESSSEEEEEEEECSCCTTCCCEEEEEEEEEECC
T ss_pred eeEEecCCeEEEEEEecCccCcccccceeeeecccCc
Confidence 256889999999999999876 9999999998764
No 9
>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1
Probab=99.47 E-value=2.9e-13 Score=91.90 Aligned_cols=75 Identities=19% Similarity=0.356 Sum_probs=66.3
Q ss_pred cCCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC--------------------------------c
Q psy2974 78 EGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT--------------------------------D 125 (186)
Q Consensus 78 ~~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~--------------------------------~ 125 (186)
+..|++.++...|.|.|| |+++..|.|.|.+++|++|.|.|. .
T Consensus 7 ~~~Cgg~l~~~~G~i~Sp-----y~~~~~C~w~I~~~~g~~I~l~f~~f~l~C~~D~l~i~dg~~~~~~~~~~CG~~p~~ 81 (114)
T 1sfp_A 7 NTNCGGILKEESGVIATY-----YGPKTNCVWTIQMPPEYHVRVSIQYLQLNCNKESLEIIDGLPGSPVLGKICEGSLMD 81 (114)
T ss_dssp ECSSCEEECCSEEEEECC-----CSSCSEEEEEEECCTTCEEEEEEEEEECCTTTEEEEEESSSTTSCEEEEESEEEEEE
T ss_pred CCCCCCeEECCcEEEeCC-----CcCCCCEEEEEEeCCCCEEEEEEeeeeeecCCCEEEEEcCCCCCcceeEecCcCCCC
Confidence 356999999889999997 778999999999999999999853 2
Q ss_pred eeeeCCeEEEEEEeCCCCCCCCcEEEEEEEeC
Q psy2974 126 IISISEGLLVRFRSDDTVVGKGFSASYIAIDT 157 (186)
Q Consensus 126 ~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~ 157 (186)
++|.++.|+|.|+||.+...+||+|.|++.+.
T Consensus 82 ~~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~p~ 113 (114)
T 1sfp_A 82 YRSSGSIMTVKYIREPEHPASFYEVLYFQDPQ 113 (114)
T ss_dssp EECSSSEEEEEEEECTTSCCCCCEEEEEEESC
T ss_pred EEecCCeEEEEEEECCCCCCCCEEEEEEEEcC
Confidence 56789999999999999999999999998754
No 10
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=99.45 E-value=1.6e-13 Score=117.08 Aligned_cols=87 Identities=33% Similarity=0.529 Sum_probs=78.4
Q ss_pred CCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC----------------------------------
Q psy2974 79 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT---------------------------------- 124 (186)
Q Consensus 79 ~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~---------------------------------- 124 (186)
..|+..++...|.|.||+||..|+++..|.|.|.+++|++|.|.|.
T Consensus 127 ~~C~~~~~~~~G~i~SPnyP~~Yp~n~~C~W~I~~p~g~~I~L~F~~F~lE~~~~~~~~~~C~~D~l~I~dG~~~~~~~l 206 (577)
T 4gz9_A 127 PECSQNYTAPTGVIKSPGFPEKYPNSLECTYIIFAPKMSEIILEFESFDLEQDSNPPGGMFCRYDRLEIWDGFPEVGPHI 206 (577)
T ss_dssp CEEEEEECSSEEEEECTTTTSCCCSSCEEEEEEECGGGCCEEEEEEEEECCCCCSCSTTCCCCSSEEEEESSSTTTSCEE
T ss_pred cccceeecCCCccccCCCCCCCCCCCceEEEEEEECCCCEEEEEEEEEEeeecCCCCCCCccCccEEEEEcCCCCCCcee
Confidence 3588889999999999999999999999999999999999988742
Q ss_pred ----------ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEEeCCCCceeee
Q psy2974 125 ----------DIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQGSKEFSE 165 (186)
Q Consensus 125 ----------~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~~~~~~~~~ 165 (186)
.++|.++.|+|+|+||.++.++||+|.|++++...+..+.|
T Consensus 207 g~~CG~~~P~~i~S~~n~l~i~F~SD~s~~~~GF~a~y~~v~~~~s~~~~c 257 (577)
T 4gz9_A 207 GRYCGQKTPGRIRSSSGVLSMVFYTDSAIAKEGFSANYSVLQSSISEDFKC 257 (577)
T ss_dssp EEECSSSCCCCEEECSSEEEEEEECCSSCCCCEEEEEEEECCCCCCTTCCS
T ss_pred EEEeCCCCCCCcceeCCEEEEEEEECCCCCCceEEEEEEEEcccccccccc
Confidence 36788999999999999999999999999999887766666
No 11
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=99.44 E-value=3.8e-13 Score=97.54 Aligned_cols=75 Identities=32% Similarity=0.485 Sum_probs=66.1
Q ss_pred eecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC---------------------------------------
Q psy2974 84 EITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT--------------------------------------- 124 (186)
Q Consensus 84 ~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~--------------------------------------- 124 (186)
.++...|.|.||+||..|+++..|.|.|.++++++|.|.|.
T Consensus 7 ~l~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~~C~~D~l~i~dg~~~~~~~CG~~~~~~~~~P 86 (170)
T 1szb_A 7 WPEPVFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSHLCEYDFVKLSSGAKVLATLCGQESTDTERAP 86 (170)
T ss_dssp CCCCCEEEEECTTTTSCCCSSCEEEEEEECCTTEEEEEEEEEEECCCCTTSCSSEEEEESSSSEEEEECSBTTTTCSSSC
T ss_pred eEcCCCeEEECCCCCcCCcCCCcEEEEEEcCCCCEEEEEEEEEEccCCCCCCCCEEEEEeCCccccccCCCCCCccccCC
Confidence 46678899999999999999999999999999999988742
Q ss_pred ---ceeeeCCeEEEEEEeCCCCCC--CCcEEEEEEEeCC
Q psy2974 125 ---DIISISEGLLVRFRSDDTVVG--KGFSASYIAIDTQ 158 (186)
Q Consensus 125 ---~~~s~~~~l~i~f~sd~~~~~--~GF~~~y~~~~~~ 158 (186)
.++|.++.|+|.|+||.+... .||.+.|.+++.+
T Consensus 87 ~~~~~~S~~n~l~v~F~Sd~~~~~~~~Gf~~~~~~~di~ 125 (170)
T 1szb_A 87 GKDTFYSLGSSLDITFRSDYSNEKPFTGFEAFYAAEDID 125 (170)
T ss_dssp TTCCEECSSSEEEEEEECCSCCSSCCCEEEEEEEEEECC
T ss_pred CCceEEeeCCeEEEEEeccccccCcCcCceeeeeccccC
Confidence 356778999999999999886 9999999987654
No 12
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=99.44 E-value=2e-13 Score=110.07 Aligned_cols=75 Identities=37% Similarity=0.613 Sum_probs=66.8
Q ss_pred eecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC---------------------------------------
Q psy2974 84 EITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT--------------------------------------- 124 (186)
Q Consensus 84 ~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~--------------------------------------- 124 (186)
.++...|.|+||+||+.|+++..|.|.|.+++|++|+|.|.
T Consensus 4 ~lt~~~G~i~SP~yP~~Yp~n~~C~W~I~~~~g~~I~l~F~~f~lE~~~~C~~D~l~i~dg~~~~~~~cG~~~~~~~~~~ 83 (361)
T 4aqb_A 4 ELNNMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSYLCEYDYVKVETEDQVLATFCGRETTDTEQTP 83 (361)
T ss_dssp EEESSEEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCGGGCSSEEEEECSSCEEEEECSBSSSSSSCCC
T ss_pred EEeCCeEEEeCCCCCCCCCCCCeEEEEEEECCCCEEEEEEeEEEecCCCCCCceEEEEccCCcccceeeccccCCCccCC
Confidence 46778899999999999999999999999999999999853
Q ss_pred ---ceeeeCCeEEEEEEeCCCCCCC--CcEEEEEEEeCC
Q psy2974 125 ---DIISISEGLLVRFRSDDTVVGK--GFSASYIAIDTQ 158 (186)
Q Consensus 125 ---~~~s~~~~l~i~f~sd~~~~~~--GF~~~y~~~~~~ 158 (186)
.++|.++.|+|.|+||.++.++ ||+|+|+++...
T Consensus 84 ~~~~~~S~~n~l~v~F~SD~s~~~~~~GF~a~y~~~~~~ 122 (361)
T 4aqb_A 84 GQEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDVD 122 (361)
T ss_dssp TTCCEECSSSEEEEEEEECSCCCSCCCEEEEEEEEEECC
T ss_pred CccceeccCCEeEEEEEeCCcccccccccccceeecccc
Confidence 1578899999999999998774 999999998765
No 13
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=99.43 E-value=2.8e-13 Score=112.33 Aligned_cols=87 Identities=32% Similarity=0.521 Sum_probs=74.7
Q ss_pred CCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC----------------------------------
Q psy2974 79 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT---------------------------------- 124 (186)
Q Consensus 79 ~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~---------------------------------- 124 (186)
..|++.++...|.|.||+||+.|+++..|.|.|.++++++|.|.|.
T Consensus 9 ~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~~~~~~~~C~~D~l~i~dg~~~~~~~~ 88 (450)
T 2qqm_A 9 PECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHI 88 (450)
T ss_dssp CTTCEEECSSEEEEECTTTTSCCCSSCEEEEEEECGGGCCEEEEEEEEECCCC----CCCSSCSSEEEEESSSTTTSCEE
T ss_pred CCCCCeEeCCcEEEeCCCCCcCCCCCCeEEEEEEeCCCCEEEEEEEEEEeEeccCCCCCCCCCCcEEEEecCCCCCCccc
Confidence 4699999888999999999999999999999999999999988742
Q ss_pred ----------ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEEeCCCCceeee
Q psy2974 125 ----------DIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQGSKEFSE 165 (186)
Q Consensus 125 ----------~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~~~~~~~~~ 165 (186)
.++|.++.|+|.|+||.+...+||+|.|+++.......+.|
T Consensus 89 ~~~CG~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~~~~~~~~~~C 139 (450)
T 2qqm_A 89 GRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKC 139 (450)
T ss_dssp EEECTTCCCCEEEECSSEEEEEEECCSSCCCCEEEEEEEECCCCCC--CCS
T ss_pred eeecCCcCCCcEEEcCCEEEEEEEeCCccccCCeEEEEecccccccCCCcc
Confidence 25788999999999999999999999999987554444444
No 14
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=99.42 E-value=5.7e-13 Score=110.81 Aligned_cols=87 Identities=29% Similarity=0.547 Sum_probs=71.9
Q ss_pred CCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC----------------------------------
Q psy2974 79 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT---------------------------------- 124 (186)
Q Consensus 79 ~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~---------------------------------- 124 (186)
..|++.++...|.|.||+||+.|+++..|.|.|.+++|++|.|.|.
T Consensus 6 ~~Cg~~l~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~L~F~~f~le~~~~~~~~~~C~~D~l~i~dg~~~~~~~~ 85 (460)
T 2qqo_A 6 EDCSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVGEGDCKYDWLDIWDGIPHVGPLI 85 (460)
T ss_dssp -CCCEEECSSEEEEECTTTTSCCCSSCEEEEEEECCTTCEEEEEEEEEECCCC--------CCSSEEEEESSSTTTSCEE
T ss_pred CCCCCEEeCCceEEeCCCCCCCCCCCCEEEEEEEcCCCCEEEEEEEEEEcccccccccCCCCCCCEEEEEcCCCCCCccc
Confidence 3589999888999999999999999999999999999999988742
Q ss_pred ----------ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEEeCCCCceeee
Q psy2974 125 ----------DIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQGSKEFSE 165 (186)
Q Consensus 125 ----------~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~~~~~~~~~ 165 (186)
.++|.++.|+|.|+||.+...+||+|.|++++...+..+.|
T Consensus 86 ~~~CG~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~~~~~~~~~~C 136 (460)
T 2qqo_A 86 GKYCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSARYYLVHQEPLENFQC 136 (460)
T ss_dssp EEECTTCCCCCEEECSSEEEEEEECCSSCCCCEEEEEEEEECC-------C
T ss_pred ceEeCCcCCcCEEeeCCEEEEEEeccceeecCcEEEEEEEEecccccceec
Confidence 25788999999999999999999999999987644333434
No 15
>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens}
Probab=99.38 E-value=8.8e-13 Score=109.50 Aligned_cols=78 Identities=32% Similarity=0.647 Sum_probs=71.5
Q ss_pred cceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC------------------------------------
Q psy2974 81 CKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT------------------------------------ 124 (186)
Q Consensus 81 C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~------------------------------------ 124 (186)
|++.++...|.|.||+||+.|+++..|.|.|.+++|++|+|.|.
T Consensus 1 CGg~l~~~~G~i~SP~yP~~Y~~~~~C~w~I~~~~g~~i~L~f~~f~le~~~~C~~D~l~i~d~~~~~~l~~~CG~~~p~ 80 (457)
T 3kq4_B 1 CGEILTESTGTIQSPGHPNVYPHGINCTWHILVQPNHLIHLMFETFHLEFHYNCTNDYLEVYDTDSETSLGRYCGKSIPP 80 (457)
T ss_dssp CCCEECSSEEECCCSSTTSCCCSSCCCEEEEECCSSEEEEECCSCCCCCCCSSCCSSEEEEECTTSSSEEEEECSSCCCS
T ss_pred CCCeEecCCEEEeCCCCCCCCCCCCcEEEEEEcCCCCEEEEEEEeeecccCCCCCccEEEEEcCCCCcccceeCCCCCCC
Confidence 78888889999999999999999999999999999999999853
Q ss_pred ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEEeCC
Q psy2974 125 DIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQ 158 (186)
Q Consensus 125 ~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~~ 158 (186)
.++|.++.|+|.|+||.+...+||+|.|.+++..
T Consensus 81 ~~~S~~n~l~v~F~sd~~~~~~GF~~~y~~~~~~ 114 (457)
T 3kq4_B 81 SLTSSGNSLMLVFVTDSDLAYEGFLINYEAISAA 114 (457)
T ss_dssp CEECSSSEEEEEEECCSSCCCSCCCCEEEEEESS
T ss_pred cEEEeCCEEEEEEEecCccccCceeEeeeccccc
Confidence 2678899999999999999999999999998653
No 16
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=99.36 E-value=3.1e-12 Score=109.12 Aligned_cols=87 Identities=29% Similarity=0.547 Sum_probs=75.8
Q ss_pred CCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC----------------------------------
Q psy2974 79 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT---------------------------------- 124 (186)
Q Consensus 79 ~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~---------------------------------- 124 (186)
..|++.++...|.|.||+||..|+++..|.|.|.++++++|.|.|.
T Consensus 125 ~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~F~~f~le~~~~~~~~~~C~~D~l~I~dg~~~~~~~~ 204 (579)
T 2qqk_A 125 EDCSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVGEGDCKYDWLDIWDGIPHVGPLI 204 (579)
T ss_dssp CCCCCEECCSEEEEECTTTTSCCCSSCEEEEEEECCTTEEEEEEEEEEEC-------------CCEEEEESSSTTTSCEE
T ss_pred ccccceeccCCceecCCCCcccCCCCCeEEEEEEcCCCCEEEEEEEEEEeecccccccCCCCCCEEEEEEeCCCCCCcee
Confidence 3599999989999999999999999999999999999999987642
Q ss_pred ----------ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEEeCCCCceeee
Q psy2974 125 ----------DIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQGSKEFSE 165 (186)
Q Consensus 125 ----------~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~~~~~~~~~ 165 (186)
.++|.++.|+|.|+||.++..+||+|.|+++....+..+.|
T Consensus 205 ~~~CG~~~p~~i~S~~n~l~i~F~sd~~~~~~GF~~~y~~~~~~~~~~~~C 255 (579)
T 2qqk_A 205 GKYCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSARYYLVHQEPLENFQC 255 (579)
T ss_dssp EEECSSSCCCCEEECSSEEEEEEECCSSCCCCEEEEEEEEEECCCCSSCCS
T ss_pred EEeCCCCCCCcEEeeCCeEEEEEeccccccccceEEEEEEEecccccCCeE
Confidence 25788999999999999999999999999987765544545
No 17
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=99.35 E-value=2.6e-12 Score=109.59 Aligned_cols=79 Identities=27% Similarity=0.492 Sum_probs=68.4
Q ss_pred CCcceeecCC-CCcccCCCCCCCCCCCCceEEEEEcCCC-CEEEeccC--------------------------------
Q psy2974 79 GGCKYEITAP-NGVIKTPNHPDYYPSKRECIWHFTTTPG-HRIKLNPT-------------------------------- 124 (186)
Q Consensus 79 ~~C~~~~~~~-~G~i~sp~~p~~y~~~~~C~w~i~~~~g-~~i~l~~~-------------------------------- 124 (186)
..||+.++.. .|.|+||+||..|+++..|.|.|.++.+ .+|.|.|.
T Consensus 7 ~~CGg~l~~~~~G~i~SPnyP~~Yp~n~~C~W~I~~p~~~~~I~L~F~~~f~le~~~C~~Dyl~I~dG~~~~~~~lg~~C 86 (577)
T 4gz9_A 7 DKCGGTIKIENPGYLTSPGYPHSYHPSEKCEWLIQAPEPYQRIMINFNPHFDLEDRDCKYDYVEVIDGENEGGRLWGKFC 86 (577)
T ss_dssp CCSSEEEECSSCEEEECTTTTTCCCSSCEEEEEEECSSTTCCEEEEECSCCBCCCGGGTSSEEEEEESSSTTSEEEEEEC
T ss_pred CCCCCEEEcCCCEEEeCCCCCCCCCCCCeEEEEEEECCCCcEEEEEEEeeeeecCCCCCccEEEEEeCCCCCCcEEEEec
Confidence 3699988754 5999999999999999999999999865 67888753
Q ss_pred ------ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEEeC
Q psy2974 125 ------DIISISEGLLVRFRSDDTVVGKGFSASYIAIDT 157 (186)
Q Consensus 125 ------~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~ 157 (186)
.++|.++.|+|+|+||.++.++||+|.|+++..
T Consensus 87 G~~~p~~i~S~~n~l~v~F~SD~s~~~~GF~a~y~~~~~ 125 (577)
T 4gz9_A 87 GKIAPSPVVSSGPFLFIKFVSDYETHGAGFSIRYEIFKR 125 (577)
T ss_dssp SSSCCCCEECSSSEEEEEEECCSSCCCCBCEEEEEECCC
T ss_pred CCCCCCCEEEeCCeEEEEEEECCCCCCCCeEEEEEEeec
Confidence 267889999999999999999999999998643
No 18
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=99.35 E-value=1.9e-12 Score=100.75 Aligned_cols=76 Identities=37% Similarity=0.589 Sum_probs=64.6
Q ss_pred eeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC--------------------------------------
Q psy2974 83 YEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT-------------------------------------- 124 (186)
Q Consensus 83 ~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~-------------------------------------- 124 (186)
..++...|.|.||+||+.|+++..|.|.|.++++++|+|.|.
T Consensus 3 ~~lt~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~L~F~~f~le~~~~C~~D~l~v~dg~~~~~~~CG~~~~~~~~~ 82 (278)
T 3dem_A 3 VELNNMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSYLCEYDYVKVETEDQVLATFCGRETTDTEQT 82 (278)
T ss_dssp ----CCEEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCGGGCSSEEEEECSSCEEEEECSBSSSSSSCC
T ss_pred ceeccCCceEeCCCCCCCCcCCCcEEEEEEECCCCEEEEEEEEEEeCCCCCCCCcEEEEecCCcccceEcCCcCCCcccC
Confidence 356778899999999999999999999999999999999742
Q ss_pred ----ceeeeCCeEEEEEEeCCCCCC--CCcEEEEEEEeCC
Q psy2974 125 ----DIISISEGLLVRFRSDDTVVG--KGFSASYIAIDTQ 158 (186)
Q Consensus 125 ----~~~s~~~~l~i~f~sd~~~~~--~GF~~~y~~~~~~ 158 (186)
.++|.++.|+|.|+||.+... .||+|.|++++.+
T Consensus 83 ~~~~~~~S~~n~l~v~F~Sd~~~~~~~~GF~~~y~~~~~~ 122 (278)
T 3dem_A 83 PGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDVD 122 (278)
T ss_dssp CTTCCEECSSSEEEEEEEECSCCCSCCCEEEEEEEEEECC
T ss_pred CCCccEEecCCeEEEEEecCcccccccceeEEEEEEeccc
Confidence 367889999999999998875 7999999998765
No 19
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=99.32 E-value=3.4e-12 Score=99.90 Aligned_cols=75 Identities=31% Similarity=0.484 Sum_probs=61.8
Q ss_pred eecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC---------------------------------------
Q psy2974 84 EITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT--------------------------------------- 124 (186)
Q Consensus 84 ~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~--------------------------------------- 124 (186)
.++...|.|.||+||+.|+++..|.|.|.+++|++|+|.|.
T Consensus 3 ~l~~~~G~i~SP~yP~~Yp~~~~C~w~I~~p~g~~I~L~F~~f~le~~~~C~~D~l~I~dg~~~~~~~CG~~~~~~~~~P 82 (286)
T 1nt0_A 3 WPEPVFGRLVSPGFPEKYGNHQDRSWTLTAPPGFRLRLYFTHFNLELSYRCEYDFVKLTSGTKVLATLCGQESTDTERAP 82 (286)
T ss_dssp --CCCEEEEECTTTTSCCCSSCCEEEEEECCTTEEEEEEEEEEECCCCGGGCSSEEEEEETTEEEEEECSSSCCSSCBCC
T ss_pred cccCCCceEeCCCCCccCcCCCcEEEEEEcCCCCEEEEEEEEEEecCCCCCCCcEEEEECCCeEeceECCCcCCCcccCC
Confidence 45677899999999999999999999999999999998742
Q ss_pred ---ceeeeCCeEEEEEEeCCCCCC--CCcEEEEEEEeCC
Q psy2974 125 ---DIISISEGLLVRFRSDDTVVG--KGFSASYIAIDTQ 158 (186)
Q Consensus 125 ---~~~s~~~~l~i~f~sd~~~~~--~GF~~~y~~~~~~ 158 (186)
.++|.++.|+|.|+||.+... +||+|.|++++.+
T Consensus 83 ~~~~~~S~~n~l~v~F~Sd~s~~~~~~GF~a~y~~~~~~ 121 (286)
T 1nt0_A 83 GNDTFYSLGPSLKVTFHSDYSNEKPFTGFEAFYAAEDVD 121 (286)
T ss_dssp TTCEEECSSSEEEEEEECCC----CCCEEEEEEEEEECC
T ss_pred CCceEEeCCCEEEEEEEeCCcCCcCcccEEEEEEeccCC
Confidence 246778999999999999876 9999999998654
No 20
>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens}
Probab=99.26 E-value=1.1e-11 Score=102.88 Aligned_cols=77 Identities=29% Similarity=0.593 Sum_probs=70.5
Q ss_pred CCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC----------------------------------
Q psy2974 79 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT---------------------------------- 124 (186)
Q Consensus 79 ~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~---------------------------------- 124 (186)
..|++.++...|.|.||+||..|+++..|.|.|.++++++|.|.|.
T Consensus 232 ~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~~~~i~l~f~~f~le~~~~C~~D~l~i~dg~~~~~~~l~~~CG~ 311 (457)
T 3kq4_B 232 TGCGGNLTTSSGTFISPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHHPNCTLDYLAVYDGPSSNSHLLTQLCGD 311 (457)
T ss_dssp CCCEECCCSSEEEEECTTTTSCCCSSCEEEEEECCSTTCCEEEEEEECCCCCCTTCCSSEEEEEESSSTTSEEEEEECSS
T ss_pred CCCCCeEccCcceeccCCCCCCCCCCCEEEEEEEeCCCCEEEEEEEeeeecCCCCcCCCEEEEEeCCCCCchhhhhhcCC
Confidence 5699999889999999999999999999999999999999999743
Q ss_pred ----ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEE
Q psy2974 125 ----DIISISEGLLVRFRSDDTVVGKGFSASYIAI 155 (186)
Q Consensus 125 ----~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~ 155 (186)
.++|+++.|+|+|++|.+...+||+|.|++.
T Consensus 312 ~~p~~i~S~~n~l~v~f~sd~~~~~~GF~a~y~~~ 346 (457)
T 3kq4_B 312 EKPPLIRSSGDSMFIKLRTDEGQQGRGFKAEYRQT 346 (457)
T ss_dssp CCCCCEECSSSCEEEEEECCSSCCCCCCEEEEEEC
T ss_pred cCCCCEEecCCEEEEEEEeCCcccCCeEEEEEEee
Confidence 2678899999999999999999999999974
No 21
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=99.22 E-value=3.7e-11 Score=102.50 Aligned_cols=78 Identities=32% Similarity=0.557 Sum_probs=65.0
Q ss_pred CCcceeecC-CCCcccCCCCCCCCCCCCceEEEEEcCC-CCEEEeccC--------------------------------
Q psy2974 79 GGCKYEITA-PNGVIKTPNHPDYYPSKRECIWHFTTTP-GHRIKLNPT-------------------------------- 124 (186)
Q Consensus 79 ~~C~~~~~~-~~G~i~sp~~p~~y~~~~~C~w~i~~~~-g~~i~l~~~-------------------------------- 124 (186)
..|++.+.. ..|.|.||+||..|+++..|.|.|.++. +++|.|.|.
T Consensus 4 ~~Cgg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~p~~~~~I~l~F~~~f~le~~~C~~D~l~i~dg~~~~~~~l~~~C 83 (579)
T 2qqk_A 4 PPCGGRLNSKDAGYITSPGYPQDYPSHQNCEWIVYAPEPNQKIVLNFNPHFEIEKHDCKYDFIEIRDGDSESADLLGKHC 83 (579)
T ss_dssp -CCCEEEETTSCEEEECTTTTSCCCSSCCEEEEEECSSTTSEEEEEECSCCBCCCTTSSSSEEEEEESSSTTSEEEEEEC
T ss_pred CCCCCEEEeCCCeEEeCCCCCCCCcCCCEEEEEEEECCCCcEEEEEEecccccccCCCCeeEEEEEeCCCCCcceeeeEC
Confidence 468988875 6799999999999999999999999985 578888654
Q ss_pred ------ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEEe
Q psy2974 125 ------DIISISEGLLVRFRSDDTVVGKGFSASYIAID 156 (186)
Q Consensus 125 ------~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~ 156 (186)
.++|.++.|+|.|+||.+..++||+|.|+++.
T Consensus 84 G~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~~ 121 (579)
T 2qqk_A 84 GNIAPPTIISSGSMLYIKFTSDYARQGAGFSLRYEIFK 121 (579)
T ss_dssp TTSCCCCEECSSSEEEEEEECC---CCCBCEEEEEEEC
T ss_pred CCCCCCCEEecCCEEEEEEEECCCCCCCceEEEEEEcc
Confidence 25678999999999999999999999999874
No 22
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.95 E-value=3.7e-10 Score=72.57 Aligned_cols=52 Identities=33% Similarity=0.483 Sum_probs=44.9
Q ss_pred cEEEcC-CCCCccccccccccccCcc-cccccCCCceEEEecCCeeeecccccc
Q psy2974 25 VFSKIG-DSFKSQDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDC 76 (186)
Q Consensus 25 Gy~~~~-d~~~C~d~~eC~~~~~~C~-~~C~n~~g~~~C~C~~G~~l~~~~~~C 76 (186)
||.+.. ++..|+|++||...+..|. +.|+|+.|+|.|.|++||.+..++++|
T Consensus 32 Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~~~~C 85 (86)
T 1lmj_A 32 GYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC 85 (86)
T ss_dssp SEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred CcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCCCCCcc
Confidence 887763 5789999999998766676 699999999999999999998888776
No 23
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.84 E-value=1.4e-09 Score=66.84 Aligned_cols=44 Identities=39% Similarity=0.995 Sum_probs=40.4
Q ss_pred ccccccccccccCcccccccCCC-ceEEEecCCeeeecccccccc
Q psy2974 35 SQDKDECMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDCKE 78 (186)
Q Consensus 35 C~d~~eC~~~~~~C~~~C~n~~g-~~~C~C~~G~~l~~~~~~C~~ 78 (186)
..|++||...++.|++.|.|++| +|.|.|++||.|..++++|.+
T Consensus 2 ~~d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d 46 (69)
T 1kli_L 2 KDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 46 (69)
T ss_dssp CSCCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred CcccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccC
Confidence 46899999888899999999999 899999999999999999974
No 24
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.84 E-value=2.3e-09 Score=69.03 Aligned_cols=51 Identities=29% Similarity=0.640 Sum_probs=45.1
Q ss_pred cEEEcCCCCCccccccccccccCcccccccCCCceEEEe--cCCeeeeccccccc
Q psy2974 25 VFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSC--HNGYTLLENGHDCK 77 (186)
Q Consensus 25 Gy~~~~d~~~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C--~~G~~l~~~~~~C~ 77 (186)
||.+.++++.|++++||.. ..|.+.|+|++++|.|.| ..||.+..+++.|.
T Consensus 32 G~~~~~~g~~C~dideC~~--~~C~~~C~n~~g~y~C~C~g~~G~~~~~~~~~C~ 84 (87)
T 1z6c_A 32 GYRYNLKSKSCEDIDECSE--NMCAQLCVNYPGGYTCYCDGKKGFKLAQDQKSCE 84 (87)
T ss_dssp TCEEETTTTEEECCCHHHH--SCCSSEECCCSSSCCEECCSSSCCBCCTTSSSCB
T ss_pred CceECCCCCcCCCcCeeCC--CCCCCEEEccCCCEEEECCCCcCCcccCCCCcce
Confidence 9999999999999999975 468899999999999999 58888887777775
No 25
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.83 E-value=9.9e-10 Score=73.50 Aligned_cols=68 Identities=25% Similarity=0.595 Sum_probs=20.8
Q ss_pred CCCccccccccccccCcccccccCCCceEEEecCCeeeec-----ccccccc-CCcceeecCCCCcccCCCCCCC
Q psy2974 32 SFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLE-----NGHDCKE-GGCKYEITAPNGVIKTPNHPDY 100 (186)
Q Consensus 32 ~~~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~-----~~~~C~~-~~C~~~~~~~~G~i~sp~~p~~ 100 (186)
+..| +++||...++.|.+.|+++.++|.|.|++||.+.. +...|.. ..|.+.+.+..|.+.+.+.+++
T Consensus 24 ~~~C-d~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~~~~C~~~C~n~~gsy~C~C~~Gy 97 (107)
T 2w2n_E 24 QGAM-GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGF 97 (107)
T ss_dssp SCCB-SCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEETTTEEEC-----------------------------
T ss_pred CCCC-cCccCcCCCCCCCCEeEeCCCCeEEECCCCccccCCCccccccccCCCCCcCCeeecCCCCEEEECCCCc
Confidence 3345 45555554445555555555555566665555421 1122321 3344445555555555555444
No 26
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.81 E-value=8.9e-10 Score=89.43 Aligned_cols=59 Identities=31% Similarity=0.639 Sum_probs=24.9
Q ss_pred CCCCCC-cEEEcCCCCCccccccccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974 19 PHDTLT-VFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78 (186)
Q Consensus 19 ~~~~~~-Gy~~~~d~~~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~ 78 (186)
+.+.+. ||.+.+|++.|+|++||. .+..|.+.|.|+.|+|.|.|++||.+..+++.|..
T Consensus 24 ~~C~C~~G~~l~~~~~~C~d~~eC~-~~~~C~~~C~~~~g~~~C~C~~g~~l~~d~~~C~~ 83 (386)
T 3v65_B 24 VQCTCHTGYRLTEDGRTCQDVNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKA 83 (386)
T ss_dssp -----------------------------CCTTEEC-----CCEECCTTEEECTTSSCEEE
T ss_pred cEeECCCCceECCCCCccCccceeC-CcCcccCcCCCCCCCCeEEECCCceEcCCCCeECC
Confidence 444443 999999999999999998 34689999999999999999999999998999973
No 27
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.80 E-value=6.8e-09 Score=73.24 Aligned_cols=70 Identities=26% Similarity=0.523 Sum_probs=50.4
Q ss_pred CCCccCcCCCCCCCCCCCCCC--------cEEEcCCCCCccccccccccccCccccc-ccCCCceEEEecCCeeeecccc
Q psy2974 4 LDPRIEDKCNNCNESPHDTLT--------VFSKIGDSFKSQDKDECMTNNGGCQHEC-RNTIGSYICSCHNGYTLLENGH 74 (186)
Q Consensus 4 ~~~~~~~~C~~c~~~~~~~~~--------Gy~~~~d~~~C~d~~eC~~~~~~C~~~C-~n~~g~~~C~C~~G~~l~~~~~ 74 (186)
+|++...-|.+ .+.|+++.+ ||. |..|+++++|...++.|.+.| +++.++|.|.|++||.+..+++
T Consensus 48 ideC~~~pC~n-~g~C~~~~~~y~C~C~~G~~----G~~C~~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~dG~ 122 (146)
T 1x7a_L 48 GDQCEPNPCLN-GGLCKDDINSYECWCQVGFE----GKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQK 122 (146)
T ss_dssp --CCSSCSSCT-TCEEEECSSCEEEECCSSEE----STTTCEECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEECTTSS
T ss_pred cCcCCCCCCCC-CCEeECCCCCEEEecCCCCc----CCcCCCCccccCCCCCCcCCCCCCCCCCEEeEcCCCcEeCCCCC
Confidence 34544445543 345555544 666 778988899987667788899 8999999999999998888888
Q ss_pred cccc
Q psy2974 75 DCKE 78 (186)
Q Consensus 75 ~C~~ 78 (186)
.|.+
T Consensus 123 ~C~~ 126 (146)
T 1x7a_L 123 SCKP 126 (146)
T ss_dssp SEEE
T ss_pred cCCC
Confidence 8763
No 28
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.77 E-value=3.2e-09 Score=62.34 Aligned_cols=41 Identities=39% Similarity=0.925 Sum_probs=36.6
Q ss_pred cccccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974 38 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78 (186)
Q Consensus 38 ~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~ 78 (186)
.+||...++.|.+.|+|++|+|.|.|++||.|..++++|.+
T Consensus 1 ~dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~d 41 (55)
T 2jkh_L 1 RKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP 41 (55)
T ss_dssp -CCTTTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred CccccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeecc
Confidence 37888777889999999999999999999999999999974
No 29
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.76 E-value=3.8e-09 Score=86.14 Aligned_cols=52 Identities=31% Similarity=0.655 Sum_probs=46.7
Q ss_pred cEEEcCCCCCccccccccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974 25 VFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78 (186)
Q Consensus 25 Gy~~~~d~~~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~ 78 (186)
||.+ .++..|+|++||.. +..|.+.|.|+.|+|.|.|++||.+..+++.|..
T Consensus 28 G~~~-~~~~~C~dideC~~-~~~C~~~C~n~~g~~~C~C~~g~~~~~~~~~C~~ 79 (400)
T 3p5b_L 28 GFQL-VAQRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKA 79 (400)
T ss_dssp TEEE-CSSSCEEECCCCST-TSSCSSCCBCCSSSCBCCCCTTCCCCTTTSSCCC
T ss_pred CCCc-CCCCcccCchhhhc-cCCCCCccCCCccceeeeccccccccccccceee
Confidence 8888 68899999999984 4689999999999999999999999988888864
No 30
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=98.75 E-value=5e-09 Score=60.92 Aligned_cols=42 Identities=48% Similarity=1.081 Sum_probs=36.7
Q ss_pred ccccccccc--------ccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974 36 QDKDECMTN--------NGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 36 ~d~~eC~~~--------~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
.||+||... ...|.+.|+|++|+|.|.|++||.+..++++|.
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~ 51 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ 51 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred CccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECCCCCccC
Confidence 578999864 367999999999999999999999988888885
No 31
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.69 E-value=2e-08 Score=63.77 Aligned_cols=48 Identities=27% Similarity=0.665 Sum_probs=36.1
Q ss_pred cEEEcCCCCCccccccccccccCcc-cccccCCCceEEEecCCeeeecccccc
Q psy2974 25 VFSKIGDSFKSQDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDC 76 (186)
Q Consensus 25 Gy~~~~d~~~C~d~~eC~~~~~~C~-~~C~n~~g~~~C~C~~G~~l~~~~~~C 76 (186)
||.+ ++..|++++||... ..|. +.|+|+.++|.|.|++||.+..+ +.|
T Consensus 33 Gy~~--~g~~C~dideC~~~-~~C~~~~C~n~~g~y~C~C~~G~~g~~~-~~C 81 (82)
T 1emn_A 33 GYIL--AGNECVDTDECSVG-NPCGNGTCKNVIGGFECTCEEGFEPGPM-MTC 81 (82)
T ss_dssp TEEE--ETTEEEECCGGGTC-CTTSSSCEEECSSSEEECCSSSSCCCSS-SCC
T ss_pred CeEC--CCCccCCcccccCC-CCCCCCEeECCCCCEEeECCCCeEeCCC-Ccc
Confidence 7766 47788889998742 3564 68999999999999999887655 444
No 32
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=98.60 E-value=3.6e-08 Score=58.57 Aligned_cols=47 Identities=34% Similarity=0.796 Sum_probs=37.9
Q ss_pred ccccccCcccccccCC-CceEEEecCCeeeecccccccc---CCcceeecC
Q psy2974 41 CMTNNGGCQHECRNTI-GSYICSCHNGYTLLENGHDCKE---GGCKYEITA 87 (186)
Q Consensus 41 C~~~~~~C~~~C~n~~-g~~~C~C~~G~~l~~~~~~C~~---~~C~~~~~~ 87 (186)
|...++.|+|.|.|++ |+|.|.|++||.|..++++|.+ ..|+..+.+
T Consensus 2 C~~~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~~pC~~~c~n 52 (59)
T 2wph_E 2 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPFPCGRVSVS 52 (59)
T ss_dssp TTTGGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEESSSSCTTCCCSC
T ss_pred CcCCCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccCCCCCCCCCcccc
Confidence 5556678999999999 6999999999999999999974 345554433
No 33
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.59 E-value=1.8e-08 Score=71.05 Aligned_cols=53 Identities=36% Similarity=0.666 Sum_probs=45.6
Q ss_pred CcEEEcCCCCCccccccccccccCccc-ccccCCCceEEEecCCeeeeccccccc
Q psy2974 24 TVFSKIGDSFKSQDKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 24 ~Gy~~~~d~~~C~d~~eC~~~~~~C~~-~C~n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
.||.+ .++..|+||+||...+..|.+ .|+|+.++|.|.|++||.+..++++|+
T Consensus 94 ~Gy~~-~~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~C~ 147 (147)
T 2w86_A 94 KGYSR-IKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRICL 147 (147)
T ss_dssp TTEEE-EETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSSCBC
T ss_pred Ccccc-CCCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCCeeC
Confidence 49976 368899999999977777864 899999999999999999988888773
No 34
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.57 E-value=8e-08 Score=67.31 Aligned_cols=94 Identities=26% Similarity=0.467 Sum_probs=63.0
Q ss_pred cCcCCCCCCCCCCCC-----CCcEEEc-----CCCCCccccccccccc-cCcc--cccccCCCceEEEecCCeeeecc--
Q psy2974 8 IEDKCNNCNESPHDT-----LTVFSKI-----GDSFKSQDKDECMTNN-GGCQ--HECRNTIGSYICSCHNGYTLLEN-- 72 (186)
Q Consensus 8 ~~~~C~~c~~~~~~~-----~~Gy~~~-----~d~~~C~d~~eC~~~~-~~C~--~~C~n~~g~~~C~C~~G~~l~~~-- 72 (186)
.+..|.+ +..|+++ ..||... .++..|++++||.... ..|. +.|+++.++|.|.|++||.+...
T Consensus 5 C~~~C~~-~~~C~~~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~ 83 (143)
T 2bou_A 5 CARWCPQ-DSSCVNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAK 83 (143)
T ss_dssp CCTTCCT-TEEESSSSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCS
T ss_pred CcCcCCC-CCEEcCCCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCcc
Confidence 3445543 4444443 2289754 4567899999998753 2575 79999999999999999987532
Q ss_pred ------ccccc------c--CCcc--eeecCCCCcccCCCCCCCCC
Q psy2974 73 ------GHDCK------E--GGCK--YEITAPNGVIKTPNHPDYYP 102 (186)
Q Consensus 73 ------~~~C~------~--~~C~--~~~~~~~G~i~sp~~p~~y~ 102 (186)
+..|. . ..|. +.+.+..|.+.+.+.+++..
T Consensus 84 ~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g 129 (143)
T 2bou_A 84 TFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKP 129 (143)
T ss_dssp CBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCB
T ss_pred ccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCccc
Confidence 22443 1 4464 56777888888888777654
No 35
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.57 E-value=4.5e-08 Score=62.86 Aligned_cols=66 Identities=24% Similarity=0.501 Sum_probs=52.2
Q ss_pred cccccccccccCc-ccccccCCCceEEEecCCeeeeccccccc------cCCcceeecCCCCcccCCC--CCCCC
Q psy2974 36 QDKDECMTNNGGC-QHECRNTIGSYICSCHNGYTLLENGHDCK------EGGCKYEITAPNGVIKTPN--HPDYY 101 (186)
Q Consensus 36 ~d~~eC~~~~~~C-~~~C~n~~g~~~C~C~~G~~l~~~~~~C~------~~~C~~~~~~~~G~i~sp~--~p~~y 101 (186)
+|++||...+..| .+.|+++.++|.|.|++||.+..+++.|+ ...|.+.+.+..|.+.+.+ ++++.
T Consensus 1 ~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~C~~~C~n~~g~y~C~C~g~~G~~ 75 (87)
T 1z6c_A 1 KDVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENMCAQLCVNYPGGYTCYCDGKKGFK 75 (87)
T ss_dssp CCSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSCCSSEECCCSSSCCEECCSSSCCB
T ss_pred CccccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCCCCCCEEEccCCCEEEECCCCcCCc
Confidence 3789999877667 57899999999999999999877666664 3567777888888887766 66653
No 36
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.57 E-value=3e-08 Score=66.21 Aligned_cols=61 Identities=30% Similarity=0.634 Sum_probs=14.6
Q ss_pred CCCCCCCCCC--------cEEEcCCCCCccccccccccccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974 15 CNESPHDTLT--------VFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 15 c~~~~~~~~~--------Gy~~~~d~~~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
|...|+++.+ ||.+. ++..|+|++||.. +..|.+.|+|+.++|.|.|++||.+..++++|+
T Consensus 39 C~~~C~n~~g~y~C~C~~Gy~g~-~g~~C~dideC~~-~~~C~~~C~n~~gsy~C~C~~Gy~~~~d~~~C~ 107 (107)
T 2w2n_E 39 CSYVCNDLKIGYECLCPDGFQLV-AQRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK 107 (107)
T ss_dssp CSSEEECCSBSCEEECCTTCEEE-TTTEEEC----------------------------------------
T ss_pred CCCEeEeCCCCeEEECCCCcccc-CCCccccccccCC-CCCcCCeeecCCCCEEEECCCCceECCCCCccC
Confidence 3345666544 78764 6789999999984 357889999999999999999999988887773
No 37
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.56 E-value=3e-08 Score=70.99 Aligned_cols=53 Identities=38% Similarity=0.666 Sum_probs=47.3
Q ss_pred cEEEcCCCCCccccccccccccCcc-cccccCCCceEEEecCCeeeeccccccc
Q psy2974 25 VFSKIGDSFKSQDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 25 Gy~~~~d~~~C~d~~eC~~~~~~C~-~~C~n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
||...+++..|+||+||...+..|. +.|+|+.++|.|.|++||.+..++++|+
T Consensus 109 G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~d~~~C~ 162 (162)
T 1uzk_A 109 GFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD 162 (162)
T ss_dssp TEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBBC
T ss_pred CcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCCCCCCccC
Confidence 8998888889999999987666787 5999999999999999999988888873
No 38
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.53 E-value=1.2e-07 Score=64.03 Aligned_cols=59 Identities=29% Similarity=0.569 Sum_probs=47.3
Q ss_pred CCCCCCCCC--------cEEEcCCCCCcccc---ccccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974 16 NESPHDTLT--------VFSKIGDSFKSQDK---DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78 (186)
Q Consensus 16 ~~~~~~~~~--------Gy~~~~d~~~C~d~---~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~ 78 (186)
++.|+++.+ ||. +..|+++ ++|...++.|.+.|+++.++|.|.|++||.+..+++.|.+
T Consensus 25 ~g~C~~~~~~y~C~C~~G~~----G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~ 94 (114)
T 1aut_L 25 HGTCIDGIGSFSCDCRSGWE----GRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHP 94 (114)
T ss_dssp SEEECCCSSCCCEEECTTEE----STTSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEE
T ss_pred cCCCCCCCCCcEeeCCCCCc----CCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCCccCc
Confidence 445655544 776 6679875 4698767789999999999999999999999888888863
No 39
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=98.51 E-value=3e-08 Score=57.12 Aligned_cols=38 Identities=37% Similarity=0.924 Sum_probs=33.5
Q ss_pred ccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974 41 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78 (186)
Q Consensus 41 C~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~ 78 (186)
|...++.|++.|+|++|+|.|.|++||.|..++++|.+
T Consensus 1 C~~~ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~d 38 (51)
T 1kig_L 1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVS 38 (51)
T ss_dssp CCTTTTSSSSCCCEETTEECCCCCTTEEECTTSSCEEE
T ss_pred CCCCCCCcCCEeEcCCCCeEEeCCCCcEECCCCCcccc
Confidence 44556789999999999999999999999999999974
No 40
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.49 E-value=4.6e-08 Score=72.06 Aligned_cols=50 Identities=34% Similarity=0.739 Sum_probs=35.1
Q ss_pred cEEEcCCCCCccc-c-ccccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974 25 VFSKIGDSFKSQD-K-DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78 (186)
Q Consensus 25 Gy~~~~d~~~C~d-~-~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~ 78 (186)
||. |..|++ + ++|...++.|.+.|++..++|.|.|++||.+..++..|..
T Consensus 70 Gf~----G~~Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~~C~~ 121 (195)
T 1nfu_B 70 GFE----GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP 121 (195)
T ss_dssp ---------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred Cce----eccccccccccccCCCCCCCCEeECCCCCeEEECCCCceeCCCCCcccc
Confidence 676 778986 5 8898877788889999999999999999998888888863
No 41
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.46 E-value=6.6e-08 Score=65.66 Aligned_cols=50 Identities=32% Similarity=0.641 Sum_probs=35.8
Q ss_pred cEEEcCCCCCccccccccccccCcccccccCCCceEEEecCCeeeecc-cccc
Q psy2974 25 VFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLEN-GHDC 76 (186)
Q Consensus 25 Gy~~~~d~~~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~-~~~C 76 (186)
||.+.. +..|++++||... ..|.+.|+|+.++|.|.|++||.+..+ ++.|
T Consensus 68 Gy~~~~-g~~C~dideC~~~-~~C~~~C~n~~g~y~C~C~~G~~g~~~~g~~C 118 (118)
T 1dx5_I 68 GYILDD-GFICTDIDECENG-GFCSGVCHNLPGTFECICGPDSALAGQIGTDC 118 (118)
T ss_dssp TEEEET-TTEEEECCHHHHC-SSCSSEEEECSSSEEEEECSSSSCEEEESCCC
T ss_pred CccCCC-CCccccccccCCC-CCCcCeEEeCCCCEEEECCCCCccCCCCCCCC
Confidence 777665 6778888888762 456777888888888888888876655 4443
No 42
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.46 E-value=6.6e-08 Score=67.14 Aligned_cols=46 Identities=35% Similarity=0.779 Sum_probs=32.1
Q ss_pred CCCccc-c-ccccccccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974 32 SFKSQD-K-DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 32 ~~~C~d-~-~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
|..|++ + ++|...++.|.+.|+++.++|.|.|++||.+..+++.|.
T Consensus 73 G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g~~C~ 120 (134)
T 2vh0_B 73 GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACI 120 (134)
T ss_dssp --------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred CCccccCCCCccccCCCCCCCEeECCCCCEEEECCCCcEECCCCCccC
Confidence 677877 5 788876667888888888888899999988887777775
No 43
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.46 E-value=1e-07 Score=66.81 Aligned_cols=63 Identities=25% Similarity=0.482 Sum_probs=49.6
Q ss_pred CCCCCCCCC--------cEEEcCC--------CCCccccccccccccCcc--cccccCCCceEEEecCCeeeeccccccc
Q psy2974 16 NESPHDTLT--------VFSKIGD--------SFKSQDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 16 ~~~~~~~~~--------Gy~~~~d--------~~~C~d~~eC~~~~~~C~--~~C~n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
+..|+++.+ ||.+... +..|++++||......|. +.|+|+.++|.|.|++||.+..+.+.|.
T Consensus 58 ~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~ 137 (143)
T 2bou_A 58 FSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQ 137 (143)
T ss_dssp TEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSB
T ss_pred CCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCc
Confidence 355665544 8887643 458999999987556786 7999999999999999999888777776
Q ss_pred c
Q psy2974 78 E 78 (186)
Q Consensus 78 ~ 78 (186)
+
T Consensus 138 ~ 138 (143)
T 2bou_A 138 K 138 (143)
T ss_dssp T
T ss_pred c
Confidence 4
No 44
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.45 E-value=2.2e-07 Score=58.85 Aligned_cols=66 Identities=32% Similarity=0.626 Sum_probs=48.9
Q ss_pred CccccccccccccCcc-cccccCCCceEEEecCCeeeeccccccc-------cCCcc-eeecCCCCcccCCCCCCCCC
Q psy2974 34 KSQDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDCK-------EGGCK-YEITAPNGVIKTPNHPDYYP 102 (186)
Q Consensus 34 ~C~d~~eC~~~~~~C~-~~C~n~~g~~~C~C~~G~~l~~~~~~C~-------~~~C~-~~~~~~~G~i~sp~~p~~y~ 102 (186)
+|.|++||.. +..|. +.|+++.++|.|.|++||.+. +..|. ...|. +.+.+..|.+.+.+.+++..
T Consensus 1 sC~dideC~~-~~~C~~g~C~n~~g~y~C~C~~Gy~~~--g~~C~dideC~~~~~C~~~~C~n~~g~y~C~C~~G~~g 75 (82)
T 1emn_A 1 SAVDMDECKE-PDVCKHGQCINTDGSYRCECPFGYILA--GNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEP 75 (82)
T ss_dssp CCCCCCSSSS-TTSCSSSEECCCSSCCCEECCTTEEEE--TTEEEECCGGGTCCTTSSSCEEECSSSEEECCSSSSCC
T ss_pred CCCccccCCC-CCCcCCCEEEecCCCEEEECCCCeECC--CCccCCcccccCCCCCCCCEeECCCCCEEeECCCCeEe
Confidence 4889999987 45675 489999999999999999863 44443 23453 45677778888887777654
No 45
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=98.43 E-value=9.5e-08 Score=55.46 Aligned_cols=38 Identities=42% Similarity=1.147 Sum_probs=33.8
Q ss_pred ccccccCcccccccCCC-ceEEEecCCeeeecccccccc
Q psy2974 41 CMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDCKE 78 (186)
Q Consensus 41 C~~~~~~C~~~C~n~~g-~~~C~C~~G~~l~~~~~~C~~ 78 (186)
|...++.|+|.|.|+++ +|.|.|++||.|..++++|.+
T Consensus 2 C~~~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d 40 (53)
T 2bz6_L 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 40 (53)
T ss_dssp TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred CcCCCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccC
Confidence 55566789999999999 799999999999999999974
No 46
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.41 E-value=4.4e-08 Score=79.41 Aligned_cols=73 Identities=34% Similarity=0.844 Sum_probs=16.5
Q ss_pred cccccccccccCcccccccCCCceEEEecCCeeeecccccccc-------CCcceeecCCCCcccCCCCCCCC--CCCCc
Q psy2974 36 QDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE-------GGCKYEITAPNGVIKTPNHPDYY--PSKRE 106 (186)
Q Consensus 36 ~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~-------~~C~~~~~~~~G~i~sp~~p~~y--~~~~~ 106 (186)
.|++||...++.|.+.|.+..|+|.|.|++||.+..+++.|.+ ..|.+.+.+..|.+.|.+.+++. +....
T Consensus 1 ~~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~C~~~~g~~~C~C~~g~~l~~d~~~ 80 (386)
T 3v65_B 1 TGEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRS 80 (386)
T ss_dssp ---------------------------------------------------CCTTEEC-----CCEECCTTEEECTTSSC
T ss_pred CCcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccCccceeCCcCcccCcCCCCCCCCeEEECCCceEcCCCCe
Confidence 3689999888899999999999999999999998888888853 45666788888999998888764 33455
Q ss_pred eE
Q psy2974 107 CI 108 (186)
Q Consensus 107 C~ 108 (186)
|.
T Consensus 81 C~ 82 (386)
T 3v65_B 81 CK 82 (386)
T ss_dssp EE
T ss_pred EC
Confidence 64
No 47
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.40 E-value=5.8e-07 Score=70.87 Aligned_cols=70 Identities=34% Similarity=0.658 Sum_probs=53.2
Q ss_pred CCCccCcCCCCCCCCCCCCCC--------cEEEcCCCCCcc-cccccccc-ccCcccccccCCCceEEEecCCeeeeccc
Q psy2974 4 LDPRIEDKCNNCNESPHDTLT--------VFSKIGDSFKSQ-DKDECMTN-NGGCQHECRNTIGSYICSCHNGYTLLENG 73 (186)
Q Consensus 4 ~~~~~~~~C~~c~~~~~~~~~--------Gy~~~~d~~~C~-d~~eC~~~-~~~C~~~C~n~~g~~~C~C~~G~~l~~~~ 73 (186)
+|++...-|.+ .+.|.++.+ ||. |..|+ |++||... +..|.+.|.|..++|.|.|++||.+..+.
T Consensus 5 ~~~C~~~pC~~-~g~C~~~~~~~~C~C~~g~~----g~~C~~~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~~ 79 (317)
T 3h5c_B 5 GSPCISQPCLH-NGSCQDSIWGYTCTCSPGYE----GSNCELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDH 79 (317)
T ss_dssp -CCTTSCCCTT-TCCCCCCSSSCCCCCSSSCC----SSSSCCCSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTTS
T ss_pred CCcCCCCCCCC-CCEeECCCCCeEEECCCCCc----CCccccCcccCCCCCCCCCcCccccCCCeeEEeccccccccccc
Confidence 45666566644 444544433 775 78898 99999863 36798899999999999999999998888
Q ss_pred ccccc
Q psy2974 74 HDCKE 78 (186)
Q Consensus 74 ~~C~~ 78 (186)
..|.+
T Consensus 80 ~~C~~ 84 (317)
T 3h5c_B 80 KQCVP 84 (317)
T ss_dssp SCCEE
T ss_pred ccccc
Confidence 88874
No 48
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.36 E-value=1.6e-07 Score=82.80 Aligned_cols=52 Identities=31% Similarity=0.669 Sum_probs=46.4
Q ss_pred cEEEcCCCCCccccccccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974 25 VFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78 (186)
Q Consensus 25 Gy~~~~d~~~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~ 78 (186)
||.+ .+++.|+|++||. .+..|.+.|+|+.|+|.|.|++||.+..++++|..
T Consensus 340 Gy~l-~~g~~C~dideC~-~~~~C~~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~ 391 (791)
T 3m0c_C 340 GFQL-VAQRRCEDIDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKA 391 (791)
T ss_dssp TCEE-ETTTEEECCCCCS-SSSSCTTTCCBCSSCBCCCCCSSEECCSSCCCCEE
T ss_pred CCcc-CCCCccccCcccC-CCCCCCCeeecCCCCceeecCCCCEeCCCCceeee
Confidence 7877 7889999999998 45689999999999999999999999888888864
No 49
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.33 E-value=6.1e-07 Score=73.03 Aligned_cols=62 Identities=29% Similarity=0.691 Sum_probs=52.1
Q ss_pred ccccccccCcccccccCCCceEEEecCCeeeecccccccc-------CCcceeecCCCCcccCCCCCCCC
Q psy2974 39 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE-------GGCKYEITAPNGVIKTPNHPDYY 101 (186)
Q Consensus 39 ~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~-------~~C~~~~~~~~G~i~sp~~p~~y 101 (186)
+||...+..|.+.|.|++++|.|.|++||.+ .+++.|.+ ..|.+.+.+..|.+.|.+.+++.
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~-~~~~~C~dideC~~~~~C~~~C~n~~g~~~C~C~~g~~ 69 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQ 69 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEE-CSSSCEEECCCCSTTSSCSSCCBCCSSSCBCCCCTTCC
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCc-CCCCcccCchhhhccCCCCCccCCCccceeeecccccc
Confidence 5888877889999999999999999999997 45666652 45777788899999999988875
No 50
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.32 E-value=3.6e-07 Score=79.51 Aligned_cols=52 Identities=31% Similarity=0.655 Sum_probs=46.3
Q ss_pred cEEEcCCCCCccccccccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974 25 VFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78 (186)
Q Consensus 25 Gy~~~~d~~~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~ 78 (186)
||.+ .+++.|++++||.. +..|.+.|+|+.|+|.|.|++||.+..++++|..
T Consensus 322 G~~~-~~~~~C~dideC~~-~~~C~~~C~n~~g~y~C~C~~G~~~~~~~~~C~~ 373 (699)
T 1n7d_A 322 GFQL-VAQRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKA 373 (699)
T ss_dssp SSCC-CSSSCCCCCCCCSS-SSSCTTTCCBCSSCBCCCCCSSCBCCSSCCCCBC
T ss_pred CeEc-CCCCcccCccccCC-CCccccccccCCCCeeeeeecccccCCCCCcccc
Confidence 8887 78899999999974 3579999999999999999999999888888863
No 51
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.32 E-value=4.7e-07 Score=57.85 Aligned_cols=67 Identities=25% Similarity=0.455 Sum_probs=49.8
Q ss_pred cccccccccccCccc-ccccCCCceEEEecCCeeeec-cccccc------c--CCcc-eeecCCCCcccCCCCCCCCC
Q psy2974 36 QDKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTLLE-NGHDCK------E--GGCK-YEITAPNGVIKTPNHPDYYP 102 (186)
Q Consensus 36 ~d~~eC~~~~~~C~~-~C~n~~g~~~C~C~~G~~l~~-~~~~C~------~--~~C~-~~~~~~~G~i~sp~~p~~y~ 102 (186)
+|++||...+..|.+ .|+++.++|.|.|++||.+.. +++.|. . ..|. +.+.+..|.+.+.+.+++..
T Consensus 1 ~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~ 78 (86)
T 1lmj_A 1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQL 78 (86)
T ss_dssp CCCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCC
T ss_pred CccccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCccc
Confidence 378999987777864 899999999999999998642 244553 2 2354 56777888888888777653
No 52
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.31 E-value=6.8e-07 Score=76.51 Aligned_cols=82 Identities=23% Similarity=0.388 Sum_probs=60.1
Q ss_pred cEEEcCCCCCccccccccccccCccc-----ccccCCCceEEE-ecCCeeeec-----------cccccc------c--C
Q psy2974 25 VFSKIGDSFKSQDKDECMTNNGGCQH-----ECRNTIGSYICS-CHNGYTLLE-----------NGHDCK------E--G 79 (186)
Q Consensus 25 Gy~~~~d~~~C~d~~eC~~~~~~C~~-----~C~n~~g~~~C~-C~~G~~l~~-----------~~~~C~------~--~ 79 (186)
||. ++++.|++++||...++.|.+ .|+++.++|.|. |++||.... .+..|. . .
T Consensus 33 Gyt--Gdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~ 110 (634)
T 1yo8_A 33 GFL--GNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTH 110 (634)
T ss_dssp TBC--SCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCC
T ss_pred ccC--CCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcccccccccCCCc
Confidence 775 556899999999987777864 899999999998 999998543 122343 2 3
Q ss_pred Ccc--eeecCCC----CcccCCCCCCCCCCCCceE
Q psy2974 80 GCK--YEITAPN----GVIKTPNHPDYYPSKRECI 108 (186)
Q Consensus 80 ~C~--~~~~~~~----G~i~sp~~p~~y~~~~~C~ 108 (186)
.|. +.+.+.. |.+.|.+.+++......|.
T Consensus 111 pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce 145 (634)
T 1yo8_A 111 NCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICG 145 (634)
T ss_dssp CCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEE
T ss_pred ccccCccccccccccccceeeeccCCccccCcccc
Confidence 564 4566666 8888888888776556665
No 53
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.27 E-value=6.6e-07 Score=62.64 Aligned_cols=69 Identities=35% Similarity=0.756 Sum_probs=51.2
Q ss_pred CCCccCcCCCCCCCCCCCCCC--------cEEEcCCCCCccc-cccc---cccccCcccccccCCC-ceEEEecCCeeee
Q psy2974 4 LDPRIEDKCNNCNESPHDTLT--------VFSKIGDSFKSQD-KDEC---MTNNGGCQHECRNTIG-SYICSCHNGYTLL 70 (186)
Q Consensus 4 ~~~~~~~~C~~c~~~~~~~~~--------Gy~~~~d~~~C~d-~~eC---~~~~~~C~~~C~n~~g-~~~C~C~~G~~l~ 70 (186)
+|++...-|.+ .+.|+++.+ ||. |..|++ +++| ...++.|.+.|+++.+ +|.|.|++||.+.
T Consensus 47 id~C~~~pC~n-~g~C~~~~g~y~C~C~~G~~----G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~ 121 (142)
T 2c4f_L 47 GDQCASSPCQN-GGSCKDQLQSYICFCLPAFE----GRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLL 121 (142)
T ss_dssp CCGGGGCCCCT-TCEEEEETTEEEEECCTTEE----STTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEEC
T ss_pred cCcCcCCCcCC-CCEEeCCCCCEEeeCCCCcc----CCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceEC
Confidence 45555555644 445655544 776 788986 6774 4445678889999999 9999999999999
Q ss_pred ccccccc
Q psy2974 71 ENGHDCK 77 (186)
Q Consensus 71 ~~~~~C~ 77 (186)
.+++.|.
T Consensus 122 ~dG~~C~ 128 (142)
T 2c4f_L 122 ADGVSCT 128 (142)
T ss_dssp TTSSCEE
T ss_pred CCCCCCC
Confidence 8888886
No 54
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.18 E-value=1.6e-06 Score=60.98 Aligned_cols=75 Identities=28% Similarity=0.604 Sum_probs=49.5
Q ss_pred CCCccccccccccccCcc--cccccCCCceEEEecCCeeeecccccccc--------CCcceee-cCCCCcccCCCCCCC
Q psy2974 32 SFKSQDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLENGHDCKE--------GGCKYEI-TAPNGVIKTPNHPDY 100 (186)
Q Consensus 32 ~~~C~d~~eC~~~~~~C~--~~C~n~~g~~~C~C~~G~~l~~~~~~C~~--------~~C~~~~-~~~~G~i~sp~~p~~ 100 (186)
...|.|+++|... +|. +.|++..++|.|.|++||. +..|.. ..|...+ .+..|.+.+.+.+++
T Consensus 42 ~~~c~dideC~~~--pC~n~g~C~~~~~~y~C~C~~G~~----G~~C~~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy 115 (146)
T 1x7a_L 42 WKQYVDGDQCEPN--PCLNGGLCKDDINSYECWCQVGFE----GKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGY 115 (146)
T ss_dssp --------CCSSC--SSCTTCEEEECSSCEEEECCSSEE----STTTCEECCTTSGGGSCSSBCCCCSSSCCCCBCCTTE
T ss_pred hccCCCcCcCCCC--CCCCCCEeECCCCCEEEecCCCCc----CCcCCCCccccCCCCCCcCCCCCCCCCCEEeEcCCCc
Confidence 3479999999864 464 5999999999999999997 445531 3466677 778888988888887
Q ss_pred C--CCCCceEEEEE
Q psy2974 101 Y--PSKRECIWHFT 112 (186)
Q Consensus 101 y--~~~~~C~w~i~ 112 (186)
. .....|...+.
T Consensus 116 ~l~~dG~~C~~~~~ 129 (146)
T 1x7a_L 116 RLAPDQKSCKPAVP 129 (146)
T ss_dssp EECTTSSSEEECSS
T ss_pred EeCCCCCcCCCCCC
Confidence 5 44566765443
No 55
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=98.15 E-value=9e-07 Score=63.68 Aligned_cols=52 Identities=40% Similarity=0.961 Sum_probs=42.8
Q ss_pred CcEEEcCCCCCccccccccccccC---cccccccCCCceEEEecCCeeeecccccccc
Q psy2974 24 TVFSKIGDSFKSQDKDECMTNNGG---CQHECRNTIGSYICSCHNGYTLLENGHDCKE 78 (186)
Q Consensus 24 ~Gy~~~~d~~~C~d~~eC~~~~~~---C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~ 78 (186)
.||.+. ..+.+++||...++. |.+.|.|..|+|.|.|++||.+..++++|.+
T Consensus 113 ~Gf~~~---~~~~di~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~ 167 (170)
T 1szb_A 113 TGFEAF---YAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 167 (170)
T ss_dssp CEEEEE---EEEEECCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred cCceee---eeccccCcccCCCCCCCccCCccccCCCCEEEeCCCCcEECCCCCcccc
Confidence 466542 246789999876554 9999999999999999999999999988863
No 56
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.14 E-value=4.2e-06 Score=57.89 Aligned_cols=94 Identities=19% Similarity=0.411 Sum_probs=60.9
Q ss_pred CCCcc--CcCCCCCCCCCCCCCC--------cEEEcCCCCCcc-ccccccccccCcccccccCCCceEEEecCCeeeec-
Q psy2974 4 LDPRI--EDKCNNCNESPHDTLT--------VFSKIGDSFKSQ-DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLE- 71 (186)
Q Consensus 4 ~~~~~--~~~C~~c~~~~~~~~~--------Gy~~~~d~~~C~-d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~- 71 (186)
+|+.. ...|.+ ++.|+++.+ ||. +..|+ ++++|...+....+.|++..++|.|.|++||....
T Consensus 5 ideC~~~~~~C~~-~g~C~~~~g~~~C~C~~Gy~----G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C 79 (135)
T 2vj3_A 5 VDECSLGANPCEH-AGKCINTLGSFECQCLQGYT----GPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHC 79 (135)
T ss_dssp CCTTTSSSCSSST-TCEEEECSSSEEEECCTTEE----STTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSS
T ss_pred cccccCCCCCCCC-CCEeECCCCCEEEECCCCCc----CCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcc
Confidence 55544 345644 456666544 776 67885 89999875433347899999999999999997321
Q ss_pred --cccccccCCcc--eeecCCCCcccCCCCCCCCC
Q psy2974 72 --NGHDCKEGGCK--YEITAPNGVIKTPNHPDYYP 102 (186)
Q Consensus 72 --~~~~C~~~~C~--~~~~~~~G~i~sp~~p~~y~ 102 (186)
+...|....|. +.+.+..|.+.+.+.+++..
T Consensus 80 ~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G 114 (135)
T 2vj3_A 80 EVNTDECASSPCLHNGRCLDKINEFQCECPTGFTG 114 (135)
T ss_dssp CEECCTTTTCCSTTTCEEEECSSCEEEECCTTEES
T ss_pred eecCCcccCCCcCCCCEeECCCCCeEEECCCCCcC
Confidence 11223334443 45666677777777777653
No 57
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.14 E-value=5.9e-07 Score=65.59 Aligned_cols=83 Identities=20% Similarity=0.444 Sum_probs=57.7
Q ss_pred cEEEcCCCCCcccccccccc--ccCcc--cccccCC-----CceEEEecCCeeeeccc---cccccCCcc--eeec----
Q psy2974 25 VFSKIGDSFKSQDKDECMTN--NGGCQ--HECRNTI-----GSYICSCHNGYTLLENG---HDCKEGGCK--YEIT---- 86 (186)
Q Consensus 25 Gy~~~~d~~~C~d~~eC~~~--~~~C~--~~C~n~~-----g~~~C~C~~G~~l~~~~---~~C~~~~C~--~~~~---- 86 (186)
||... ++..|+++++|... ...|. +.|+++. ++|.|.|++||...... ..|....|. +.+.
T Consensus 32 G~~g~-~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~d~C~~~~C~~~g~C~~~~~ 110 (186)
T 1z1y_A 32 GLVHL-SENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYL 110 (186)
T ss_dssp TEEEE-ETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEEGGGTTCCCCTTEEEEEEEE
T ss_pred CCccC-CCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCCCcCcCCCCCCCCEEeeCCc
Confidence 88765 56789999999854 45675 6899999 89999999999865321 345444453 4454
Q ss_pred CCCCcccCCCCCCCCC---CCCceE
Q psy2974 87 APNGVIKTPNHPDYYP---SKRECI 108 (186)
Q Consensus 87 ~~~G~i~sp~~p~~y~---~~~~C~ 108 (186)
+..|.+.+.+.+++.. ....|.
T Consensus 111 ~~~g~~~C~C~~Gy~g~~~~~~~C~ 135 (186)
T 1z1y_A 111 SEIQSAGCSCAIGXVPNPEDEXXCT 135 (186)
T ss_dssp TTEEEEEEEECTEEEEETTTTTEEE
T ss_pred CCCCCceEECCCCCcccCCCCCcce
Confidence 6667777777776654 335554
No 58
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=97.99 E-value=2.7e-06 Score=66.08 Aligned_cols=48 Identities=40% Similarity=0.809 Sum_probs=40.4
Q ss_pred cccccccc-ccCcccccccCCCceEEEecCCeeeecccccccc---CCccee
Q psy2974 37 DKDECMTN-NGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE---GGCKYE 84 (186)
Q Consensus 37 d~~eC~~~-~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~---~~C~~~ 84 (186)
+.|||... ++.|.|.|.++.++|.|.|+.||.+..+.++|.+ ..|+..
T Consensus 1 ~~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~CG~~ 52 (283)
T 3f1s_B 1 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCACGVL 52 (283)
T ss_dssp --CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTTCTTCC
T ss_pred CCCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCccccccccccCcc
Confidence 46899987 7899999999999999999999999999999975 356643
No 59
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.93 E-value=4.9e-06 Score=55.91 Aligned_cols=79 Identities=25% Similarity=0.512 Sum_probs=48.7
Q ss_pred Cccccccccccc------cCc--ccccccCCCceEEEecCCeeeeccc-----cccc--cCCcceeecCCCCcccCCCCC
Q psy2974 34 KSQDKDECMTNN------GGC--QHECRNTIGSYICSCHNGYTLLENG-----HDCK--EGGCKYEITAPNGVIKTPNHP 98 (186)
Q Consensus 34 ~C~d~~eC~~~~------~~C--~~~C~n~~g~~~C~C~~G~~l~~~~-----~~C~--~~~C~~~~~~~~G~i~sp~~p 98 (186)
.+.|++||...+ ..| .+.|++..++|.|.|++||....-. ..|. ...|...+.+..|.+.+.+.+
T Consensus 2 ~~~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~ 81 (114)
T 1aut_L 2 KHVDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAP 81 (114)
T ss_dssp ------CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCT
T ss_pred cceecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCC
Confidence 467889998865 224 3589999999999999999732100 1232 233555777888889988888
Q ss_pred CCC--CCCCceEEEEE
Q psy2974 99 DYY--PSKRECIWHFT 112 (186)
Q Consensus 99 ~~y--~~~~~C~w~i~ 112 (186)
++. .....|...+.
T Consensus 82 G~~~~~~g~~C~~~~~ 97 (114)
T 1aut_L 82 GYKLGDDLLQCHPAVK 97 (114)
T ss_dssp TEEECTTSSCEEECSS
T ss_pred CeeECCCCCccCcCcc
Confidence 875 34566765443
No 60
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.93 E-value=7.8e-06 Score=50.21 Aligned_cols=41 Identities=27% Similarity=0.523 Sum_probs=30.6
Q ss_pred cccccccccccCcc--cccccCCCceEEEe-cCCeeeecccccc
Q psy2974 36 QDKDECMTNNGGCQ--HECRNTIGSYICSC-HNGYTLLENGHDC 76 (186)
Q Consensus 36 ~d~~eC~~~~~~C~--~~C~n~~g~~~C~C-~~G~~l~~~~~~C 76 (186)
+||+||......|. +.|+|++|+|.|.+ ..||....++..+
T Consensus 1 ~DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~~~ 44 (71)
T 2kl7_A 1 SDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGEGP 44 (71)
T ss_dssp CCSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCSSC
T ss_pred CccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCCcc
Confidence 37899987666785 58999999999984 5677765555443
No 61
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=97.92 E-value=7.1e-06 Score=55.47 Aligned_cols=89 Identities=25% Similarity=0.476 Sum_probs=57.3
Q ss_pred CCCCccCcCCCCCCCCCCCC-CC--------cEEEcCCCCCccccccccc--cccCcccccccCCCceEEEecCCeeeec
Q psy2974 3 RLDPRIEDKCNNCNESPHDT-LT--------VFSKIGDSFKSQDKDECMT--NNGGCQHECRNTIGSYICSCHNGYTLLE 71 (186)
Q Consensus 3 ~~~~~~~~~C~~c~~~~~~~-~~--------Gy~~~~d~~~C~d~~eC~~--~~~~C~~~C~n~~g~~~C~C~~G~~l~~ 71 (186)
-+|+....-|. ..|+++ .+ ||.+... ++++|.. .+..|.+.|++ .++|.|.|++||.+..
T Consensus 3 dideC~~~pC~---~~C~~~~~g~y~C~C~~Gy~g~~~-----~~~~C~~~C~~~~C~~~C~~-~~~y~C~C~~Gy~~~~ 73 (118)
T 1dx5_I 3 PVDPCFRANCE---YQCQPLDQTSYLCVCAEGFAPIPH-----EPHRCQMFCNQTACPADCDP-NTQASCECPEGYILDD 73 (118)
T ss_dssp CCCGGGGCCCS---SEEEECSSSCEEEECCTTEEEETT-----EEEEEEECCCSSEEECEECT-TSTTCEECCTTEEEET
T ss_pred ccccCCCCCCC---CCCCCCCCCCEEeECCCCccccCC-----CCCccccccCCCCCCCcccC-CCCeEeECCCCccCCC
Confidence 35665444452 356666 43 7765532 3445543 23567788988 5899999999998764
Q ss_pred cccccc------c-CCcceeecCCCCcccCCCCCCCC
Q psy2974 72 NGHDCK------E-GGCKYEITAPNGVIKTPNHPDYY 101 (186)
Q Consensus 72 ~~~~C~------~-~~C~~~~~~~~G~i~sp~~p~~y 101 (186)
++.|. . ..|++.+.+..|.+.+.+.+++.
T Consensus 74 -g~~C~dideC~~~~~C~~~C~n~~g~y~C~C~~G~~ 109 (118)
T 1dx5_I 74 -GFICTDIDECENGGFCSGVCHNLPGTFECICGPDSA 109 (118)
T ss_dssp -TTEEEECCHHHHCSSCSSEEEECSSSEEEEECSSSS
T ss_pred -CCccccccccCCCCCCcCeEEeCCCCEEEECCCCCc
Confidence 55553 3 56767777778888877776654
No 62
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.85 E-value=4.4e-06 Score=66.66 Aligned_cols=40 Identities=35% Similarity=0.904 Sum_probs=27.4
Q ss_pred cccccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974 38 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78 (186)
Q Consensus 38 ~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~ 78 (186)
++||. .++.|+|.|.|++|+|.|.|++||.+..++++|..
T Consensus 1 i~ec~-~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~ 40 (349)
T 3v64_C 1 VNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKA 40 (349)
T ss_dssp ---------CCSSEECCC---CCEECCTTEEECTTSSCEEE
T ss_pred CcccC-CCCCCcCeeecCCCCeEEECCCCccCCCCCCcccc
Confidence 57898 56789999999999999999999999999999964
No 63
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=97.84 E-value=6.9e-06 Score=58.21 Aligned_cols=51 Identities=35% Similarity=0.757 Sum_probs=41.0
Q ss_pred CcEEEcCCCCCcccccccccc-ccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974 24 TVFSKIGDSFKSQDKDECMTN-NGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 24 ~Gy~~~~d~~~C~d~~eC~~~-~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
.||.+. ..+.+++||... ...|.+.|.|..++|.|.|.+||.+..++++|.
T Consensus 106 ~GF~~~---y~~~d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~~~~~C~ 157 (159)
T 1nzi_A 106 TGFAAY---YVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCG 157 (159)
T ss_dssp CEEEEE---EEEEECCTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred ccceee---eecccCcccCCCCCCCCCCcccCcCCCEEEecCCCcEECCCCCccc
Confidence 366542 246789999864 357999999999999999999999999988885
No 64
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=97.80 E-value=2e-05 Score=54.79 Aligned_cols=40 Identities=20% Similarity=0.532 Sum_probs=33.2
Q ss_pred cEEEcCCCCCcc-ccccccccccCcccccccCCCceEEEecCCee
Q psy2974 25 VFSKIGDSFKSQ-DKDECMTNNGGCQHECRNTIGSYICSCHNGYT 68 (186)
Q Consensus 25 Gy~~~~d~~~C~-d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~ 68 (186)
||. +..|+ ++++|...+....+.|+++.++|.|.|++||.
T Consensus 87 G~~----G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~ 127 (143)
T 4d90_A 87 GFN----GIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFM 127 (143)
T ss_dssp TEE----STTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCB
T ss_pred CCc----CCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCc
Confidence 785 88897 99999865433457999999999999999997
No 65
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.79 E-value=2.5e-06 Score=62.72 Aligned_cols=73 Identities=27% Similarity=0.655 Sum_probs=24.3
Q ss_pred CCccccccccccccCcc--cccccCCCceEEEecCCeeeeccccccc--------c--CCcceeecCCCCcccCCCCCCC
Q psy2974 33 FKSQDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLENGHDCK--------E--GGCKYEITAPNGVIKTPNHPDY 100 (186)
Q Consensus 33 ~~C~d~~eC~~~~~~C~--~~C~n~~g~~~C~C~~G~~l~~~~~~C~--------~--~~C~~~~~~~~G~i~sp~~p~~ 100 (186)
..|.|+++|... +|. +.|++..++|.|.|++||. +..|. . ..|...+.+..|.+.+.+.+++
T Consensus 37 ~~c~dideC~~~--pC~ngg~C~n~~g~y~C~C~~Gf~----G~~Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy 110 (195)
T 1nfu_B 37 NKYKDGDQCETS--PCQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGY 110 (195)
T ss_dssp --------------------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTE
T ss_pred ccCCCCcccCCC--CCCCCCEeECCCCCeeEeCCCCce----eccccccccccccCCCCCCCCEeECCCCCeEEECCCCc
Confidence 469999999864 465 5999999999999999997 33443 2 3466677788899999998887
Q ss_pred C--CCCCceEEEE
Q psy2974 101 Y--PSKRECIWHF 111 (186)
Q Consensus 101 y--~~~~~C~w~i 111 (186)
. .....|...+
T Consensus 111 ~l~~dG~~C~~~~ 123 (195)
T 1nfu_B 111 TLADNGKACIPTG 123 (195)
T ss_dssp EECTTSSCEEESS
T ss_pred eeCCCCCccccCC
Confidence 6 4566787654
No 66
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.77 E-value=1.6e-05 Score=42.76 Aligned_cols=36 Identities=36% Similarity=0.829 Sum_probs=27.7
Q ss_pred ccccccccccCcccccccCCCceEEEecCCeeeecccccc
Q psy2974 37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 76 (186)
Q Consensus 37 d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C 76 (186)
|+++|...+....+.|++..++|.|.|++||. +..|
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~----G~~C 37 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFE----GKNC 37 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECCTTCC----STTS
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECCCCCc----CCcc
Confidence 67888764433346899999999999999996 5555
No 67
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.76 E-value=1.3e-05 Score=55.91 Aligned_cols=72 Identities=28% Similarity=0.679 Sum_probs=51.8
Q ss_pred CccccccccccccCcc--cccccCCCceEEEecCCeeeeccccccc------------cCCcceeecCCCC-cccCCCCC
Q psy2974 34 KSQDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLENGHDCK------------EGGCKYEITAPNG-VIKTPNHP 98 (186)
Q Consensus 34 ~C~d~~eC~~~~~~C~--~~C~n~~g~~~C~C~~G~~l~~~~~~C~------------~~~C~~~~~~~~G-~i~sp~~p 98 (186)
.|.|+++|... +|. +.|+++.++|.|.|++||. +..|. .+.|.+.+.+..| .+.+.+.+
T Consensus 43 ~c~did~C~~~--pC~n~g~C~~~~g~y~C~C~~G~~----G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~ 116 (142)
T 2c4f_L 43 SYSDGDQCASS--PCQNGGSCKDQLQSYICFCLPAFE----GRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHE 116 (142)
T ss_dssp HHTTCCGGGGC--CCCTTCEEEEETTEEEEECCTTEE----STTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCT
T ss_pred cCCccCcCcCC--CcCCCCEEeCCCCCEEeeCCCCcc----CCccccCccccccccCCCCCccCEeECCCCCCEEEECCC
Confidence 57899999864 465 4899999999999999996 44443 2334446777777 88888888
Q ss_pred CCC--CCCCceEEEE
Q psy2974 99 DYY--PSKRECIWHF 111 (186)
Q Consensus 99 ~~y--~~~~~C~w~i 111 (186)
++. .....|...+
T Consensus 117 Gy~l~~dG~~C~~~~ 131 (142)
T 2c4f_L 117 GYSLLADGVSCTPTV 131 (142)
T ss_dssp TEEECTTSSCEEESS
T ss_pred CceECCCCCCCCCCC
Confidence 765 3455666433
No 68
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.75 E-value=2.1e-05 Score=69.37 Aligned_cols=64 Identities=28% Similarity=0.654 Sum_probs=53.3
Q ss_pred ccccccccccCcccccccCCCceEEEecCCeeeeccccccc-------cCCcceeecCCCCcccCCCCCCCC
Q psy2974 37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK-------EGGCKYEITAPNGVIKTPNHPDYY 101 (186)
Q Consensus 37 d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~-------~~~C~~~~~~~~G~i~sp~~p~~y 101 (186)
+++||...++.|.+.|.+++++|.|.|++||.+ .+++.|. +..|.+.+.+..|.+.+.+.+++.
T Consensus 311 ~~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l-~~g~~C~dideC~~~~~C~~~C~n~~gsy~C~C~~Gy~ 381 (791)
T 3m0c_C 311 GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQ 381 (791)
T ss_dssp SCCSTTTGGGGCSSEEEECSBSEEEECCTTCEE-ETTTEEECCCCCSSSSSCTTTCCBCSSCBCCCCCSSEE
T ss_pred ccccccccccCccccccCCCCCcccCCCCCCcc-CCCCccccCcccCCCCCCCCeeecCCCCceeecCCCCE
Confidence 467888777789999999999999999999988 5566775 245777788899999999998875
No 69
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.70 E-value=2.1e-05 Score=68.50 Aligned_cols=64 Identities=28% Similarity=0.654 Sum_probs=53.4
Q ss_pred ccccccccccCcccccccCCCceEEEecCCeeeeccccccc-------cCCcceeecCCCCcccCCCCCCCC
Q psy2974 37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK-------EGGCKYEITAPNGVIKTPNHPDYY 101 (186)
Q Consensus 37 d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~-------~~~C~~~~~~~~G~i~sp~~p~~y 101 (186)
+++||...++.|.+.|.+++++|.|.|++||.+ .+++.|. ...|.+.+.+..|.+.+.+.+++.
T Consensus 293 ~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~-~~~~~C~dideC~~~~~C~~~C~n~~g~y~C~C~~G~~ 363 (699)
T 1n7d_A 293 GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQ 363 (699)
T ss_dssp CCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCC-CSSSCCCCCCCCSSSSSCTTTCCBCSSCBCCCCCSSCB
T ss_pred ccccccccccCcCCCcccCCCCcEEeCCCCeEc-CCCCcccCccccCCCCccccccccCCCCeeeeeecccc
Confidence 578898877789999999999999999999998 4566664 245777788889999999888875
No 70
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=97.68 E-value=3.3e-06 Score=60.23 Aligned_cols=97 Identities=20% Similarity=0.301 Sum_probs=58.4
Q ss_pred CCCcc-CcCCCCCCCCCCCCCC--------cEEEcCCCCCcccccc--ccccccCc----ccccccCCC----ceEEEec
Q psy2974 4 LDPRI-EDKCNNCNESPHDTLT--------VFSKIGDSFKSQDKDE--CMTNNGGC----QHECRNTIG----SYICSCH 64 (186)
Q Consensus 4 ~~~~~-~~~C~~c~~~~~~~~~--------Gy~~~~d~~~C~d~~e--C~~~~~~C----~~~C~n~~g----~~~C~C~ 64 (186)
+|++. ...| . ++.|+++.+ ||.+.++++.|+++++ |......| .+.|++..+ +|.|.|+
T Consensus 3 ideC~~~~~C-~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~ 80 (162)
T 1uzk_A 3 VNECLDPTTC-I-SGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCS 80 (162)
T ss_dssp CCGGGSTTSS-B-TSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTT
T ss_pred cccCCCCCCC-C-CCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCC
Confidence 56643 3456 2 566666654 8999999999999988 87644333 457777666 5666666
Q ss_pred CCee---------------------------eeccccc------ccc--CCcc-eeecCCCCcccCCCCCCCCC
Q psy2974 65 NGYT---------------------------LLENGHD------CKE--GGCK-YEITAPNGVIKTPNHPDYYP 102 (186)
Q Consensus 65 ~G~~---------------------------l~~~~~~------C~~--~~C~-~~~~~~~G~i~sp~~p~~y~ 102 (186)
+||. ....+.. |.. ..|. +.+++..|.+.+.+.+++..
T Consensus 81 ~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g 154 (162)
T 1uzk_A 81 LGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYL 154 (162)
T ss_dssp TCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCB
T ss_pred CCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccC
Confidence 6554 3322222 321 2364 36777888888888777754
No 71
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=97.59 E-value=0.0001 Score=50.74 Aligned_cols=64 Identities=23% Similarity=0.642 Sum_probs=43.8
Q ss_pred CCccCcCCCCCCCCCCCCCC--------cEEEcCCCCCcc-ccccccccccCcccccccCCCceEEEecCCeeeeccccc
Q psy2974 5 DPRIEDKCNNCNESPHDTLT--------VFSKIGDSFKSQ-DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHD 75 (186)
Q Consensus 5 ~~~~~~~C~~c~~~~~~~~~--------Gy~~~~d~~~C~-d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~ 75 (186)
|+.....|.+ .+.|+++.+ ||. +..|+ ++++|...+....+.|++..++|.|.|++||. +..
T Consensus 46 ~~C~~~~C~~-~~~C~~~~g~~~C~C~~G~~----G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~----G~~ 116 (135)
T 2vj3_A 46 NECVSNPCQN-DATCLDQIGEFQCICMPGYE----GVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFT----GHL 116 (135)
T ss_dssp CTTTTCCCCS-SCEEEECSSCEEEECCTTEE----SSSSCEECCTTTTCCSTTTCEEEECSSCEEEECCTTEE----SSS
T ss_pred ccCCCCCCCC-CCEEeCCCCCceeeCCCCCc----CCcceecCCcccCCCcCCCCEeECCCCCeEEECCCCCc----CCc
Confidence 4444444532 455555543 776 77885 78999864322346899999999999999997 556
Q ss_pred cc
Q psy2974 76 CK 77 (186)
Q Consensus 76 C~ 77 (186)
|.
T Consensus 117 C~ 118 (135)
T 2vj3_A 117 CQ 118 (135)
T ss_dssp SC
T ss_pred cC
Confidence 64
No 72
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=97.56 E-value=4.2e-05 Score=55.63 Aligned_cols=46 Identities=24% Similarity=0.547 Sum_probs=37.7
Q ss_pred cEEEcC-CCCCcccc--ccccccccCc---ccccccCCCceEEEecCCeeeeccc
Q psy2974 25 VFSKIG-DSFKSQDK--DECMTNNGGC---QHECRNTIGSYICSCHNGYTLLENG 73 (186)
Q Consensus 25 Gy~~~~-d~~~C~d~--~eC~~~~~~C---~~~C~n~~g~~~C~C~~G~~l~~~~ 73 (186)
||.+.+ ++..|+++ ++|.. .| .+.|+++.++|.|.|++||......
T Consensus 123 Gy~g~~~~~~~C~~~~~~~C~~---~C~~~~~~C~n~~g~y~C~C~~G~~g~~~~ 174 (186)
T 1z1y_A 123 GXVPNPEDEXXCTXTGETACQL---XCNTDNEVCXNVEGVYXCQCMEGFTFDXEX 174 (186)
T ss_dssp EEEEETTTTTEEEEEECCCCCC---CCCTTTEEEEEETTEEEEEECTTCEEETTT
T ss_pred CCcccCCCCCcceEcCCCcccc---cccccCcceecCCCCeeeECCCCCccCccc
Confidence 888766 77899986 78974 56 5799999999999999999865443
No 73
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.55 E-value=6.7e-05 Score=43.52 Aligned_cols=38 Identities=26% Similarity=0.505 Sum_probs=28.6
Q ss_pred cccccccccccCccccc-----ccCCCceEEEecCCeeeeccccccc
Q psy2974 36 QDKDECMTNNGGCQHEC-----RNTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 36 ~d~~eC~~~~~~C~~~C-----~n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
.+++||...+....++| .+..++|.|.|++||. +..|+
T Consensus 6 ~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE 48 (55)
T 3u7u_G 6 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQ 48 (55)
T ss_dssp EECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEE----STTSC
T ss_pred ccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcC
Confidence 57899988654456799 4567899999999997 76775
No 74
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.55 E-value=9.3e-06 Score=56.14 Aligned_cols=77 Identities=25% Similarity=0.528 Sum_probs=22.6
Q ss_pred CCCccccccccccccCcc--cccccCCCceEEEecCCeeeec--c-c-ccccc--CCcceeecCCCCcccCCCCCCCC--
Q psy2974 32 SFKSQDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLE--N-G-HDCKE--GGCKYEITAPNGVIKTPNHPDYY-- 101 (186)
Q Consensus 32 ~~~C~d~~eC~~~~~~C~--~~C~n~~g~~~C~C~~G~~l~~--~-~-~~C~~--~~C~~~~~~~~G~i~sp~~p~~y-- 101 (186)
...|.++++|... .|. +.|++..++|.|.|++||.... + . ..|.. ..|...+.+..|.+.+.+.+++.
T Consensus 36 ~~~c~d~d~C~~~--pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~ 113 (134)
T 2vh0_B 36 WNKYKDGDQCETS--PCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLA 113 (134)
T ss_dssp -----------------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEEC
T ss_pred cccCCCcCcCCCC--CCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCCEeECCCCCEEEECCCCcEEC
Confidence 3469999999864 465 5899999999999999997221 0 0 12432 23555677777888888888875
Q ss_pred CCCCceEEE
Q psy2974 102 PSKRECIWH 110 (186)
Q Consensus 102 ~~~~~C~w~ 110 (186)
.....|...
T Consensus 114 ~~g~~C~~~ 122 (134)
T 2vh0_B 114 DNGKACIPT 122 (134)
T ss_dssp TTSSCEEES
T ss_pred CCCCccCcC
Confidence 345566543
No 75
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=97.55 E-value=0.00012 Score=62.85 Aligned_cols=45 Identities=24% Similarity=0.608 Sum_probs=36.8
Q ss_pred CCCCccccccccccccCcc--cccccCC----CceEEEecCCeeeeccccccc
Q psy2974 31 DSFKSQDKDECMTNNGGCQ--HECRNTI----GSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 31 d~~~C~d~~eC~~~~~~C~--~~C~n~~----g~~~C~C~~G~~l~~~~~~C~ 77 (186)
+++.|++++||...+..|. +.|+++. ++|.|.|++||.. ++..|.
T Consensus 95 dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~G--dG~~Ce 145 (634)
T 1yo8_A 95 EKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAG--DGLICG 145 (634)
T ss_dssp CCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEE--SSSSEE
T ss_pred CCCcccccccccCCCcccccCccccccccccccceeeeccCCccc--cCcccc
Confidence 4567999999997666786 6899998 9999999999973 345664
No 76
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.38 E-value=9.2e-05 Score=58.03 Aligned_cols=42 Identities=29% Similarity=0.682 Sum_probs=36.7
Q ss_pred ccccccccc---ccCcccccccCC------CceEEEecCCeeeeccccccc
Q psy2974 36 QDKDECMTN---NGGCQHECRNTI------GSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 36 ~d~~eC~~~---~~~C~~~C~n~~------g~~~C~C~~G~~l~~~~~~C~ 77 (186)
.+.++|... ++.|+|.|.+.+ ++|.|.|+.||.|..++++|.
T Consensus 265 ~~~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~ 315 (316)
T 1ijq_A 265 RGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 315 (316)
T ss_dssp CCCCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred cccccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence 367889876 788999999875 689999999999999999985
No 77
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.35 E-value=7.1e-05 Score=44.39 Aligned_cols=35 Identities=34% Similarity=0.794 Sum_probs=27.8
Q ss_pred CccccccccccccCcc--cccccCCCceEEEecCCee
Q psy2974 34 KSQDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYT 68 (186)
Q Consensus 34 ~C~d~~eC~~~~~~C~--~~C~n~~g~~~C~C~~G~~ 68 (186)
.|+++++|...+.... ++|++..++|.|.|++||.
T Consensus 7 ~~~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~ 43 (61)
T 2k2s_B 7 LSETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYR 43 (61)
T ss_dssp CTTSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEE
T ss_pred hcCCCCcCcCCCCcCCCccccccCCCceEeECCCCCc
Confidence 4778899986542223 5899999999999999996
No 78
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=97.34 E-value=5.4e-05 Score=58.48 Aligned_cols=41 Identities=32% Similarity=0.805 Sum_probs=31.2
Q ss_pred cccccccccccCcc--cccccCCCceEEEecCCeeeecccccccc
Q psy2974 36 QDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLENGHDCKE 78 (186)
Q Consensus 36 ~d~~eC~~~~~~C~--~~C~n~~g~~~C~C~~G~~l~~~~~~C~~ 78 (186)
+|+|||....+.|. ..|.|+.|+|.|.|.+||. .++..|.+
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~--GnG~~C~d 45 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQCVA 45 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEE--ECSSSEEE
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCC--CCCCcCCC
Confidence 47899987667886 5799999999999999997 45778863
No 79
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=97.33 E-value=0.00018 Score=49.77 Aligned_cols=66 Identities=20% Similarity=0.411 Sum_probs=43.1
Q ss_pred ccccccccccCcccccc-------cCCCceEEEecCCeeeeccccccc-------cCCcc--eeecCCCCcccCCCCCCC
Q psy2974 37 DKDECMTNNGGCQHECR-------NTIGSYICSCHNGYTLLENGHDCK-------EGGCK--YEITAPNGVIKTPNHPDY 100 (186)
Q Consensus 37 d~~eC~~~~~~C~~~C~-------n~~g~~~C~C~~G~~l~~~~~~C~-------~~~C~--~~~~~~~G~i~sp~~p~~ 100 (186)
++++|...+....+.|+ ++.++|.|.|++||. +..|. ...|. +.+.+..|.+.+.+.+++
T Consensus 51 ~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~----G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~ 126 (143)
T 4d90_A 51 SAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFN----GIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEF 126 (143)
T ss_dssp CCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEE----STTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTC
T ss_pred cCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCc----CCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCC
Confidence 45666553322235888 778899999999996 44453 23342 456667788888888877
Q ss_pred CCCCCc
Q psy2974 101 YPSKRE 106 (186)
Q Consensus 101 y~~~~~ 106 (186)
...+..
T Consensus 127 ~G~~c~ 132 (143)
T 4d90_A 127 MGRNCQ 132 (143)
T ss_dssp BSTTSC
T ss_pred ccCCce
Confidence 665443
No 80
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.25 E-value=0.00012 Score=62.99 Aligned_cols=42 Identities=31% Similarity=0.847 Sum_probs=38.9
Q ss_pred ccccccccccCcccccccCC-CceEEEecCCeeeecccccccc
Q psy2974 37 DKDECMTNNGGCQHECRNTI-GSYICSCHNGYTLLENGHDCKE 78 (186)
Q Consensus 37 d~~eC~~~~~~C~~~C~n~~-g~~~C~C~~G~~l~~~~~~C~~ 78 (186)
++++|...++.|+|.|.+.+ ++|.|.|+.||.+..++++|.+
T Consensus 264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~ 306 (628)
T 4a0p_A 264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA 306 (628)
T ss_dssp CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEEC
T ss_pred cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCcc
Confidence 68999988889999999999 9999999999999999999974
No 81
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.18 E-value=0.0002 Score=56.34 Aligned_cols=43 Identities=44% Similarity=0.964 Sum_probs=37.2
Q ss_pred ccccccccccCcccccccCCC--ceEEEecCCeeeeccccccccC
Q psy2974 37 DKDECMTNNGGCQHECRNTIG--SYICSCHNGYTLLENGHDCKEG 79 (186)
Q Consensus 37 d~~eC~~~~~~C~~~C~n~~g--~~~C~C~~G~~l~~~~~~C~~~ 79 (186)
..+.|...++.|+|.|...++ +|.|.|+.||.|..++++|.++
T Consensus 266 ~~n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~ 310 (318)
T 3sov_A 266 ATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDG 310 (318)
T ss_dssp CCCTTTTTGGGCSSEEEECSSTTSEEEECSTTCCBCTTSSCBCC-
T ss_pred cccccccCCCCcceEEecCCCCCCeEEECCCCCEECCCCCCCCCC
Confidence 368898878899999998876 7999999999999999999754
No 82
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.18 E-value=0.0003 Score=40.34 Aligned_cols=37 Identities=32% Similarity=0.891 Sum_probs=28.3
Q ss_pred cccccccc-ccCcc--cccc--cCCCceEEEecCCeeeeccccccc
Q psy2974 37 DKDECMTN-NGGCQ--HECR--NTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 37 d~~eC~~~-~~~C~--~~C~--n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
++++|... ..+|. ++|+ +..++|.|.|++||. +..|+
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce 43 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQ 43 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCC----SSSSC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc----CCcCC
Confidence 57888763 12464 6898 889999999999996 66664
No 83
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.16 E-value=0.00016 Score=62.03 Aligned_cols=41 Identities=29% Similarity=0.772 Sum_probs=38.1
Q ss_pred ccccccccccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974 37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 37 d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
..++|...++.|+|.|.+.+++|.|.|+.||.|..++++|.
T Consensus 577 ~~~~C~~~ng~C~~~C~~~~~~~~C~C~~g~~l~~d~~~C~ 617 (619)
T 3s94_A 577 GSNPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCI 617 (619)
T ss_dssp CCCGGGSGGGGCSSEEEEETTEEEEECCTTCEECSSTTCEE
T ss_pred ccccCCCCCCChhHhhccCCCCeEEECCCCCEECCCCCcCC
Confidence 57899988889999999999999999999999999999986
No 84
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=97.07 E-value=0.00021 Score=45.88 Aligned_cols=50 Identities=12% Similarity=0.143 Sum_probs=25.0
Q ss_pred cccCCCceEEEecCCeeeec--cccccccCCcc--eeecCCC--CcccCCCCCCCC
Q psy2974 52 CRNTIGSYICSCHNGYTLLE--NGHDCKEGGCK--YEITAPN--GVIKTPNHPDYY 101 (186)
Q Consensus 52 C~n~~g~~~C~C~~G~~l~~--~~~~C~~~~C~--~~~~~~~--G~i~sp~~p~~y 101 (186)
|.+..++|.|.|++||..-. +...|....|. +.+.+.. +.+.+.+.+++.
T Consensus 25 C~n~~~~y~C~C~~G~~~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~ 80 (91)
T 1tpg_A 25 VLRSNRVEYCWCNSGRAQCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFA 80 (91)
T ss_dssp CSSSSCEEEEECSSSCCBCCEECEEECSSCCSCTTCEEEEESSSSCEEEECCTTCB
T ss_pred cccCCCCcEeECCCCCcccccCcCCcccCCCCCCCCEeecCCCCCCeEeECCCCCc
Confidence 55666666777777765221 22345444442 3344333 555555555543
No 85
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=97.06 E-value=0.00032 Score=48.90 Aligned_cols=40 Identities=38% Similarity=0.750 Sum_probs=33.1
Q ss_pred cccccccccccCcc-cccccCCCceEEEecCCeeeeccccccc
Q psy2974 36 QDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 36 ~d~~eC~~~~~~C~-~~C~n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
.|++||... +|. +.|++++++|.|.|++||.+...+..|.
T Consensus 2 ~dideC~~~--pC~ng~C~n~~g~y~C~C~~G~~g~~~~~~C~ 42 (147)
T 2w86_A 2 ADIDECESS--PCINGVCKNSPGSFICECSSESTLDPTKTICI 42 (147)
T ss_dssp CCCCGGGGC--CSBTSEEEEETTEEEEECCTTEEECTTSSBEE
T ss_pred CcCccCcCC--CCCCCEeECCCCCEEeECCCCcccCCCCCeec
Confidence 478999864 475 5999999999999999999876666665
No 86
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=96.90 E-value=0.00062 Score=43.61 Aligned_cols=40 Identities=18% Similarity=0.674 Sum_probs=31.0
Q ss_pred Ccc--ccccccccccCcccccccCC--CceEEEecCCeeeeccccccc
Q psy2974 34 KSQ--DKDECMTNNGGCQHECRNTI--GSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 34 ~C~--d~~eC~~~~~~C~~~C~n~~--g~~~C~C~~G~~l~~~~~~C~ 77 (186)
.|+ ++++|...+....+.|++.. ++|.|.|++||. +..|.
T Consensus 42 ~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce 85 (91)
T 1tpg_A 42 QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFA----GKSCE 85 (91)
T ss_dssp BCCEECEEECSSCCSCTTCEEEEESSSSCEEEECCTTCB----SSSCC
T ss_pred ccccCcCCcccCCCCCCCCEeecCCCCCCeEeECCCCCc----CCcCC
Confidence 685 78999875422246899987 999999999996 66674
No 87
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=96.87 E-value=0.0005 Score=53.92 Aligned_cols=66 Identities=18% Similarity=0.434 Sum_probs=44.2
Q ss_pred cccccccccccCcccccccCCCceEEEecCCeeee---cccccccc---CCcceeecCCCCcccCCCCCCCC
Q psy2974 36 QDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLL---ENGHDCKE---GGCKYEITAPNGVIKTPNHPDYY 101 (186)
Q Consensus 36 ~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~---~~~~~C~~---~~C~~~~~~~~G~i~sp~~p~~y 101 (186)
.|+++|...+....+.|.+..++|.|.|++||... .+...|.. ..|...+.+..|.+.+.+.+++.
T Consensus 3 ~d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~ 74 (317)
T 3h5c_B 3 KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYR 74 (317)
T ss_dssp ---CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSSEEECCSSSCEEECCTTEE
T ss_pred ccCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcCccccCCCeeEEecccccc
Confidence 46788987553234689999999999999999721 02233433 45777788888888887776654
No 88
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=96.55 E-value=0.0014 Score=36.33 Aligned_cols=37 Identities=32% Similarity=0.837 Sum_probs=25.5
Q ss_pred cccccccc-ccCcc-cccccCC--CceEEEecCCeeeeccccccc
Q psy2974 37 DKDECMTN-NGGCQ-HECRNTI--GSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 37 d~~eC~~~-~~~C~-~~C~n~~--g~~~C~C~~G~~l~~~~~~C~ 77 (186)
++++|... ..+|. ++|.... ++|.|.|++||. +..|+
T Consensus 2 ~i~~C~~~~~~pC~nG~C~~~~~~~~~~C~C~~Gyt----G~~Ce 42 (46)
T 1k36_A 2 SITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYT----GVRCE 42 (46)
T ss_dssp CEECCCTTCCSSCSSEEEEEETTTTEEEEEECTTCS----STTSC
T ss_pred ccccCCCCCCCCCCCCEeeccCCCCCEEEECCCCCc----cCCCC
Confidence 46777651 12353 5888654 689999999997 66664
No 89
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=96.47 E-value=0.0027 Score=34.91 Aligned_cols=24 Identities=33% Similarity=0.891 Sum_probs=19.8
Q ss_pred cccc--cCCCceEEEecCCeeeeccccccc
Q psy2974 50 HECR--NTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 50 ~~C~--n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
+.|+ +..++|.|.|++||. +..|.
T Consensus 15 g~C~~~~~~~~~~C~C~~G~~----G~~Ce 40 (45)
T 1a3p_A 15 GVXMHIESLDSYTCNCVIGYS----GDRCQ 40 (45)
T ss_dssp CEEEECTTTSSEEEECCTTEE----TTTTC
T ss_pred CEEEeecCCCCEEEEcCCCCc----CCcCC
Confidence 5787 788999999999997 66664
No 90
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=96.28 E-value=0.0036 Score=35.46 Aligned_cols=34 Identities=9% Similarity=0.042 Sum_probs=25.5
Q ss_pred CcCCCCCCCCCCCCCC-cEEEcCCCCCcccccccc
Q psy2974 9 EDKCNNCNESPHDTLT-VFSKIGDSFKSQDKDECM 42 (186)
Q Consensus 9 ~~~C~~c~~~~~~~~~-Gy~~~~d~~~C~d~~eC~ 42 (186)
...|.+..+++.+.+. ||.|.+|+++|.+++||.
T Consensus 9 ~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~p 43 (51)
T 1kig_L 9 DQFCREERSEVRCSCAHGYVLGDDSKSCVSTERFP 43 (51)
T ss_dssp SSCCCEETTEECCCCCTTEEECTTSSCEEECSSSC
T ss_pred CCEeEcCCCCeEEeCCCCcEECCCCCccccCCccc
Confidence 3456555555666544 999999999999999974
No 91
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.94 E-value=0.0038 Score=49.51 Aligned_cols=41 Identities=39% Similarity=0.896 Sum_probs=36.0
Q ss_pred ccccccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974 37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78 (186)
Q Consensus 37 d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~ 78 (186)
..+.|...++.|+|.|...++++.|.|+.||. ..++++|.+
T Consensus 303 ~~n~C~~~~g~C~~lCl~~~~~~~C~C~~g~~-~~d~~~C~~ 343 (349)
T 3v64_C 303 GKNRCGDNNGGCTHLCLPSGQNYTCACPTGFR-KINSHACAL 343 (349)
T ss_dssp CCCTTTTGGGGCSSEEECCTTSCEEECCTTEE-EETTTEEEE
T ss_pred ccCcccCCCCCcccEeecCCCCCeeECCCCCc-CCCCCcccc
Confidence 35778887789999999999999999999999 888999963
No 92
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=95.89 E-value=0.0052 Score=43.81 Aligned_cols=67 Identities=13% Similarity=0.342 Sum_probs=32.9
Q ss_pred cEEEcCCCCCccccccccccccCcc-cccccCCCceEEEecCCeeeec---ccccccc-CCcc--eeecCC-CCcccCCC
Q psy2974 25 VFSKIGDSFKSQDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLE---NGHDCKE-GGCK--YEITAP-NGVIKTPN 96 (186)
Q Consensus 25 Gy~~~~d~~~C~d~~eC~~~~~~C~-~~C~n~~g~~~C~C~~G~~l~~---~~~~C~~-~~C~--~~~~~~-~G~i~sp~ 96 (186)
||. +..|+ +|...+ .|. +.|+ ++|.|.|++||.... +...|.. ..|. +.+.+. .+.+.+.+
T Consensus 90 G~~----G~~C~---~C~~~~-~C~~g~C~---~~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C 158 (169)
T 2vj2_A 90 GWQ----GLYCD---KCIPHP-GCVHGICN---EPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSC 158 (169)
T ss_dssp TEE----SSSSC---EECCCT-TCSSEECS---STTCCEECTTEETTTTCEESCHHHHTCCCCTTCEEEECSTTCEEEEC
T ss_pred CCC----CCCcc---cCCCCC-CCCCCCcC---CCCEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEEcCCCCCCcEeEC
Confidence 776 55563 344322 243 2554 567777777776221 1122322 3343 344443 45566666
Q ss_pred CCCCCC
Q psy2974 97 HPDYYP 102 (186)
Q Consensus 97 ~p~~y~ 102 (186)
.+++..
T Consensus 159 ~~G~~G 164 (169)
T 2vj2_A 159 PEGYSG 164 (169)
T ss_dssp CTTCCS
T ss_pred CCCCcC
Confidence 666543
No 93
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=95.86 E-value=0.0026 Score=36.59 Aligned_cols=19 Identities=0% Similarity=-0.116 Sum_probs=17.4
Q ss_pred cEEEcCCCCCccccccccc
Q psy2974 25 VFSKIGDSFKSQDKDECMT 43 (186)
Q Consensus 25 Gy~~~~d~~~C~d~~eC~~ 43 (186)
||.|..|++.|.+++||.-
T Consensus 29 Gy~L~~d~~~C~didec~c 47 (55)
T 2jkh_L 29 GYTLADNGKACIPTGPYPC 47 (55)
T ss_dssp TEEECTTSSCEEESSSSCT
T ss_pred CCEECCCCCeeccCccccC
Confidence 9999999999999999864
No 94
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.83 E-value=0.0047 Score=52.95 Aligned_cols=42 Identities=43% Similarity=0.949 Sum_probs=37.0
Q ss_pred ccccccccccCcccccccCC--CceEEEecCCeeeecccccccc
Q psy2974 37 DKDECMTNNGGCQHECRNTI--GSYICSCHNGYTLLENGHDCKE 78 (186)
Q Consensus 37 d~~eC~~~~~~C~~~C~n~~--g~~~C~C~~G~~l~~~~~~C~~ 78 (186)
..++|...++.|+|.|...+ ++|.|.|+.||.+..++++|..
T Consensus 271 ~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~ 314 (619)
T 3s94_A 271 ATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKD 314 (619)
T ss_dssp CCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCS
T ss_pred ccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCC
Confidence 46889888889999999876 4799999999999999999975
No 95
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=95.62 E-value=0.0051 Score=36.37 Aligned_cols=35 Identities=29% Similarity=0.568 Sum_probs=24.5
Q ss_pred ccccccccCccccccc-----CCCceEEEecCCeeeeccccccc
Q psy2974 39 DECMTNNGGCQHECRN-----TIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 39 ~eC~~~~~~C~~~C~n-----~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
++|...+....++|++ ..++|.|.|++||. +..|.
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce 46 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCT 46 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEE----STTSC
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCc----CCccC
Confidence 5565443222468886 67899999999997 66774
No 96
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=95.45 E-value=0.0086 Score=34.97 Aligned_cols=27 Identities=4% Similarity=-0.057 Sum_probs=22.3
Q ss_pred cEEEcCCCCCccccccccccccCcccccccCC
Q psy2974 25 VFSKIGDSFKSQDKDECMTNNGGCQHECRNTI 56 (186)
Q Consensus 25 Gy~~~~d~~~C~d~~eC~~~~~~C~~~C~n~~ 56 (186)
||.|.+|++.|.|+++ .+|.+.|+|..
T Consensus 28 Gy~L~~D~~tC~d~~~-----~pC~~~c~n~~ 54 (59)
T 2wph_E 28 GYRLAENQKSCEPAVP-----FPCGRVSVSQT 54 (59)
T ss_dssp TEEECTTSSCEEESSS-----SCTTCCCSCCC
T ss_pred CcEECCCCCcccCCCC-----CCCCCcccccc
Confidence 9999999999998764 46888888754
No 97
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=95.22 E-value=0.0062 Score=34.75 Aligned_cols=18 Identities=17% Similarity=0.146 Sum_probs=16.9
Q ss_pred cEEEcCCCCCcccccccc
Q psy2974 25 VFSKIGDSFKSQDKDECM 42 (186)
Q Consensus 25 Gy~~~~d~~~C~d~~eC~ 42 (186)
||.|.+|+++|.+++||.
T Consensus 28 Gy~L~~Dg~tC~d~dec~ 45 (53)
T 2bz6_L 28 GYSLLADGVSCTPTVEYP 45 (53)
T ss_dssp TEEECTTSSCEEECSSSC
T ss_pred CCEECCCCCcccCCcccc
Confidence 999999999999999985
No 98
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.40 E-value=0.022 Score=48.86 Aligned_cols=41 Identities=34% Similarity=0.758 Sum_probs=34.3
Q ss_pred ccccccccccCcccccccCC-CceEEEecCCeeeeccccccc
Q psy2974 37 DKDECMTNNGGCQHECRNTI-GSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 37 d~~eC~~~~~~C~~~C~n~~-g~~~C~C~~G~~l~~~~~~C~ 77 (186)
..+.|...++.|+|.|...+ +.+.|.|+.||.|..++++|.
T Consensus 578 ~~n~c~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~~~ 619 (628)
T 4a0p_A 578 RQHPCAQDNGGCSHICLVKGDGTTRCSCPMHLVLLQDELSCG 619 (628)
T ss_dssp HHSTTTTGGGGCSSEEEECTTSCEEEECCTTEEECTTSSCEE
T ss_pred ccccCCCCCCCcchhcccCCCCCeeeeCCCCCEECCCCCcCC
Confidence 34678877889999998765 468999999999999998874
No 99
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=93.54 E-value=0.015 Score=35.11 Aligned_cols=19 Identities=16% Similarity=0.130 Sum_probs=17.4
Q ss_pred cEEEcCCCCCccccccccc
Q psy2974 25 VFSKIGDSFKSQDKDECMT 43 (186)
Q Consensus 25 Gy~~~~d~~~C~d~~eC~~ 43 (186)
||.|.+|+++|.+++||.-
T Consensus 34 Gy~L~~D~~tC~d~dec~C 52 (69)
T 1kli_L 34 GYSLLADGVSCTPTVEYPC 52 (69)
T ss_dssp TEEECTTSSCEEECSSSCT
T ss_pred CCeECCCCCcccCcccccC
Confidence 9999999999999999864
No 100
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=93.45 E-value=0.05 Score=37.97 Aligned_cols=36 Identities=39% Similarity=0.869 Sum_probs=26.1
Q ss_pred cccccccccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974 38 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 38 ~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
+++|...+....+.|.+..++|.|.|++||. +..|.
T Consensus 119 ~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~----G~~Ce 154 (162)
T 1g1s_A 119 TASCQDMSCSKQGECLETIGNYTCSCYPGFY----GPECE 154 (162)
T ss_dssp ECCCCTTGGGGSEEEEECSSSEEEEECTTEE----STTSC
T ss_pred eCCCcCCCCCCCCEEecCCCCceEeCCCCCc----Ccccc
Confidence 4556653322246899999999999999998 56675
No 101
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=92.63 E-value=0.19 Score=32.56 Aligned_cols=59 Identities=25% Similarity=0.384 Sum_probs=43.9
Q ss_pred ccCcCCCCCCCCCCCCCC---------cEEEcCCCCCcccccc-ccccccCcc--cccccCC-CceEEEecCCee
Q psy2974 7 RIEDKCNNCNESPHDTLT---------VFSKIGDSFKSQDKDE-CMTNNGGCQ--HECRNTI-GSYICSCHNGYT 68 (186)
Q Consensus 7 ~~~~~C~~c~~~~~~~~~---------Gy~~~~d~~~C~d~~e-C~~~~~~C~--~~C~n~~-g~~~C~C~~G~~ 68 (186)
+....|+. +..|+.+.. ||.. |+..|..++. |..+++.|. ..|..+. ....|.|..+|.
T Consensus 13 C~~t~Cp~-NA~C~r~~~G~e~CrCl~gY~~--dg~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 13 CIDTNVPE-NAACYRYLDGTEEWRCLLGFKE--VGGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGS 84 (105)
T ss_dssp CCSSCCCT-TEEEEECTTSCEEEEECTTEEE--CSSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred ecCCCCCC-CCCeEECCCCCEeEEEECCeec--cCCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence 44445654 667776433 7875 6888988888 888888995 6888774 788999999964
No 102
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=92.08 E-value=0.097 Score=29.65 Aligned_cols=24 Identities=33% Similarity=0.988 Sum_probs=19.7
Q ss_pred cccc--cCCCceEEEecCCeeeeccccccc
Q psy2974 50 HECR--NTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 50 ~~C~--n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
++|. +..++|.|.|++||. +..|+
T Consensus 18 G~C~~~~~~~~~~C~C~~Gyt----G~~Ce 43 (53)
T 1nql_B 18 GVCMYIEALDKYACNCVVGYI----GERCQ 43 (53)
T ss_dssp CEEEEETTTTEEEEEECTTEE----STTSC
T ss_pred eEEeeecCCCCEEEecCCCCc----CCCCC
Confidence 5787 677899999999997 66664
No 103
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=91.89 E-value=0.091 Score=44.42 Aligned_cols=36 Identities=28% Similarity=0.712 Sum_probs=28.3
Q ss_pred cccccccccCccccccc-CCCceEEEec-CCeeeeccccccc
Q psy2974 38 KDECMTNNGGCQHECRN-TIGSYICSCH-NGYTLLENGHDCK 77 (186)
Q Consensus 38 ~~eC~~~~~~C~~~C~n-~~g~~~C~C~-~G~~l~~~~~~C~ 77 (186)
+++|...+....+.|.+ ..++|.|.|+ +||. |..|+
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce 39 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYS----GPNCT 39 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEE----TTTTC
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcC----CCCCC
Confidence 57788755333579999 8999999999 9997 66774
No 104
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=90.64 E-value=0.14 Score=43.62 Aligned_cols=36 Identities=28% Similarity=0.797 Sum_probs=27.0
Q ss_pred cccccccccCccccccc-CCCceEEEec-CCeeeeccccccc
Q psy2974 38 KDECMTNNGGCQHECRN-TIGSYICSCH-NGYTLLENGHDCK 77 (186)
Q Consensus 38 ~~eC~~~~~~C~~~C~n-~~g~~~C~C~-~G~~l~~~~~~C~ 77 (186)
+++|...+....+.|.+ ..++|.|.|+ +||. +..|+
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce 38 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFY----GENCT 38 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEE----TTTTC
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCcc----CCCCC
Confidence 46788765444579995 5589999999 9997 66674
No 105
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=88.04 E-value=0.73 Score=29.58 Aligned_cols=42 Identities=24% Similarity=0.613 Sum_probs=33.2
Q ss_pred cEEEcCCCCCcccc--ccccccccCcc--cccccCC-----CceEEEecCCee
Q psy2974 25 VFSKIGDSFKSQDK--DECMTNNGGCQ--HECRNTI-----GSYICSCHNGYT 68 (186)
Q Consensus 25 Gy~~~~d~~~C~d~--~eC~~~~~~C~--~~C~n~~-----g~~~C~C~~G~~ 68 (186)
||.. |+..|..+ +.|..+++.|. ..|.... +...|.|.+||.
T Consensus 33 gy~g--dg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 33 NYKQ--EGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp TEEE--ETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred Ceec--CCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 8875 67889887 57998888895 5888664 578999999975
No 106
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=87.95 E-value=0.25 Score=27.65 Aligned_cols=24 Identities=29% Similarity=0.898 Sum_probs=18.2
Q ss_pred ccccc----CCCceEEEecCCeeeeccccccc
Q psy2974 50 HECRN----TIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 50 ~~C~n----~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
+.|++ ..++|.|.|++||. +..|+
T Consensus 20 GtC~~~~~~~~~~y~C~C~~Gf~----G~~Ce 47 (52)
T 3ca7_A 20 AHCFAVKIADLPVYSCECAIGFM----GQRCE 47 (52)
T ss_dssp CEEEEEEETTEEEEEEECCTTEE----STTSC
T ss_pred CEEecCccCCCCCEEEECCCCCc----CCCCc
Confidence 56775 35689999999997 65664
No 107
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=87.68 E-value=0.055 Score=41.37 Aligned_cols=38 Identities=5% Similarity=-0.011 Sum_probs=30.9
Q ss_pred CCCCccccccccccccCcccccccCCCceEEEecCCee
Q psy2974 31 DSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYT 68 (186)
Q Consensus 31 d~~~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~ 68 (186)
.+..|.+.+||...+..-..+|++...+|.|.|++||.
T Consensus 92 ~G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~ 129 (267)
T 4fbr_A 92 LGARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFK 129 (267)
T ss_dssp CCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEE
T ss_pred ccCccccccccCCCCCCCCCEEecCCccEEeeCCCCcc
Confidence 36678778888876544457999999999999999998
No 108
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=81.80 E-value=0.76 Score=26.37 Aligned_cols=24 Identities=29% Similarity=0.898 Sum_probs=18.0
Q ss_pred ccccc----CCCceEEEecCCeeeeccccccc
Q psy2974 50 HECRN----TIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 50 ~~C~n----~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
++|.. ..++|.|.|++||. +..|+
T Consensus 20 GtC~~~~~~~~~~~~C~C~~Gf~----G~~Ce 47 (58)
T 3ltf_D 20 AHCFAVKIADLPVYSCECAIGFM----GQRCE 47 (58)
T ss_dssp CEEEEEEETTEEEEEEEECTTEE----SSSSC
T ss_pred CEEeCCccCCCCCEEeECCCCCc----cCCCc
Confidence 56762 45678999999997 66674
No 109
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=77.71 E-value=1.4 Score=30.11 Aligned_cols=24 Identities=42% Similarity=1.128 Sum_probs=19.7
Q ss_pred cccccCCCceEEEecCCeeeeccccccc
Q psy2974 50 HECRNTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 50 ~~C~n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
..|.+..++|.|.|.+||. +..|.
T Consensus 131 g~C~~~~~~~~c~C~~g~~----g~~Ce 154 (157)
T 1g1t_A 131 GECVETINNYTCKCDPGFS----GLKCE 154 (157)
T ss_dssp EEEEEETTEEEEEECTTEE----STTSC
T ss_pred CEeecCCCCeeEECCCCcc----Ccccc
Confidence 5888889999999999997 55553
No 110
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=77.34 E-value=0.61 Score=38.46 Aligned_cols=56 Identities=25% Similarity=0.542 Sum_probs=19.8
Q ss_pred CCccccccccccccCcc-cccccCCCceEEEecCCeeeeccccccccC----Ccc--eeecCCCCcccCCCCCCCCC
Q psy2974 33 FKSQDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDCKEG----GCK--YEITAPNGVIKTPNHPDYYP 102 (186)
Q Consensus 33 ~~C~d~~eC~~~~~~C~-~~C~n~~g~~~C~C~~G~~l~~~~~~C~~~----~C~--~~~~~~~G~i~sp~~p~~y~ 102 (186)
..|. +++|.. .|. +.|.+. +.|.|++||. +..|... .|. +.|... ..|.|.+++..
T Consensus 388 ~~c~-~~~C~~---~C~nG~C~~~---~~C~C~~G~~----G~~C~~~~C~~~C~~~g~C~~~---~~C~C~~G~~G 450 (463)
T 2wg3_C 388 AQTL-TSECSR---LCRNGYCTPT---GKCCCSPGWE----GDFCRTAKCEPACRHGGVCVRP---NKCLCKKGYLG 450 (463)
T ss_dssp CCCC-CCHHHH---HCCSEEECTT---SCEEECTTEE----STTSCEECC---------------------------
T ss_pred CCCc-cccccC---CCCCCccCCC---CeECCCCCcC----CCcCCcCcCCCCCCCCCEECCC---CEEECCCCccc
Confidence 3454 355653 243 466542 3799999986 4444432 332 233332 46777776653
No 111
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=73.60 E-value=2.2 Score=29.38 Aligned_cols=25 Identities=40% Similarity=1.062 Sum_probs=20.8
Q ss_pred ccccccCCCceEEEecCCeeeeccccccc
Q psy2974 49 QHECRNTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 49 ~~~C~n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
.+.|.+..++|.|.|++||. +..|.
T Consensus 130 ~g~C~~~~~~~~c~C~~g~~----g~~C~ 154 (164)
T 3cfw_A 130 HGECVEIINNYTCNCDVGYY----GPQCQ 154 (164)
T ss_dssp SEEEEEETTEEEEEECTTCB----SSSSC
T ss_pred CCeecccCCCceeeeCCCcc----ccccc
Confidence 46899989999999999987 55675
No 112
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=72.36 E-value=14 Score=28.68 Aligned_cols=42 Identities=24% Similarity=0.675 Sum_probs=26.5
Q ss_pred cEEEcCCCCCccccccccccccCcc--cccccCCCceEEEecCCeeeeccccccccCCc
Q psy2974 25 VFSKIGDSFKSQDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLENGHDCKEGGC 81 (186)
Q Consensus 25 Gy~~~~d~~~C~d~~eC~~~~~~C~--~~C~n~~g~~~C~C~~G~~l~~~~~~C~~~~C 81 (186)
||. |..|+. +.|.. .|. +.|.+ .+.|.|++||. +..|....|
T Consensus 172 G~~----G~~C~~-~~C~~---~C~~~G~C~~---~~~C~C~~G~~----G~~C~~~~C 215 (324)
T 2ygq_A 172 GFH----GPHCEK-ALCTP---RCMNGGLCVT---PGFCICPPGFY----GVNCDKANC 215 (324)
T ss_dssp TEE----SSSSCE-ESSSS---CCCTTCEECS---SCCEECCTTCB----TTTTCBCCC
T ss_pred CCc----CCCCCC-CCCCC---CCCCCCEEcC---CCEEeCCCCcc----CCCcccCcC
Confidence 887 667864 44642 343 46654 47899999997 555654333
No 113
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=71.69 E-value=0.41 Score=36.55 Aligned_cols=42 Identities=7% Similarity=0.009 Sum_probs=27.1
Q ss_pred CCCccccccccccccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974 32 SFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 32 ~~~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
+..|.....|...+..-..+|++...+|+|.|++||. ++.|.
T Consensus 160 G~~c~~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~----G~~c~ 201 (267)
T 4fbr_A 160 GTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGFR----GTLTS 201 (267)
T ss_dssp CSSTTSCEEEEEEECSSTTSEEEEEEEETTSCCEEEE----EEEEE
T ss_pred ccccccccccCCCCCCCCCEeeCCCCCeEEeCCCCcc----ccccc
Confidence 4455433334333222246899999999999999997 44554
No 114
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=68.56 E-value=7.8 Score=21.35 Aligned_cols=24 Identities=29% Similarity=0.906 Sum_probs=17.4
Q ss_pred cccc--cCCCceEEEecCCeeeeccccccc
Q psy2974 50 HECR--NTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 50 ~~C~--n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
++|. ...+.+.|.|+.||. +..|+
T Consensus 23 G~C~~i~~~~~~~C~C~~gy~----G~RCe 48 (50)
T 2rnl_A 23 GECKYIEHLEAVTCKCQQEYF----GERCG 48 (50)
T ss_dssp SEEEEETTTTEEEEECCSSCC----SSSCC
T ss_pred CEEEEecCCCCeeEECCCCcc----ccccc
Confidence 3665 455678999999997 65564
No 115
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=66.43 E-value=4.3 Score=32.52 Aligned_cols=35 Identities=20% Similarity=0.603 Sum_probs=25.6
Q ss_pred ccccccccCcccccccCCCceEEEecC-Ceeeeccccccc
Q psy2974 39 DECMTNNGGCQHECRNTIGSYICSCHN-GYTLLENGHDCK 77 (186)
Q Consensus 39 ~eC~~~~~~C~~~C~n~~g~~~C~C~~-G~~l~~~~~~C~ 77 (186)
+.|...+....+.|.....+|.|.|+. ||. +..|.
T Consensus 186 ~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~----G~~C~ 221 (410)
T 3asi_A 186 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFS----GPLCN 221 (410)
T ss_dssp SCCCTTSSSTTCEEEECSSSEEEECTTTSEE----STTSC
T ss_pred CCcccccCCCCCEecCCCCCceEeccCCccc----CCCCC
Confidence 456654333346899999999999996 886 66775
No 116
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=63.75 E-value=6.3 Score=31.99 Aligned_cols=14 Identities=36% Similarity=0.847 Sum_probs=12.0
Q ss_pred CCCceEEEecCCee
Q psy2974 55 TIGSYICSCHNGYT 68 (186)
Q Consensus 55 ~~g~~~C~C~~G~~ 68 (186)
..+++.|.|++||.
T Consensus 259 ~~~~~~C~C~~G~~ 272 (423)
T 2gy5_A 259 LPDPYGCSCATGWK 272 (423)
T ss_dssp ETTTTEEECCBTCB
T ss_pred CCCCCeEEeCCCcc
Confidence 45789999999997
No 117
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=63.74 E-value=3.9 Score=22.56 Aligned_cols=23 Identities=35% Similarity=0.915 Sum_probs=16.8
Q ss_pred ccc--cCCCceEEEecCCeeeeccccccc
Q psy2974 51 ECR--NTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 51 ~C~--n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
.|. ...+.+.|.|++||. +..|+
T Consensus 20 ~C~~~~~~~~~~C~C~~gy~----G~RCe 44 (50)
T 1iox_A 20 RCRFVVAEQTPSCVCDEGYI----GARCE 44 (50)
T ss_dssp CEEEETTTTEEEECCCTTEE----TTTTC
T ss_pred EEEeEcCCCCeEEECCCCcc----cCCCC
Confidence 453 455678999999997 66664
No 118
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=63.49 E-value=7.6 Score=29.30 Aligned_cols=32 Identities=19% Similarity=0.156 Sum_probs=23.0
Q ss_pred CCCCCCCCCCCCC-CcEEEcCCCCCcccccccc
Q psy2974 11 KCNNCNESPHDTL-TVFSKIGDSFKSQDKDECM 42 (186)
Q Consensus 11 ~C~~c~~~~~~~~-~Gy~~~~d~~~C~d~~eC~ 42 (186)
.|.+-.+++.+.+ .||.+..|++.|...++|.
T Consensus 16 ~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~ 48 (283)
T 3f1s_B 16 FCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCA 48 (283)
T ss_dssp BCCCCTTSCCCBCCTTEEECTTSSCEEECSTTC
T ss_pred EeeCCCCCeEecCCCCcccCCCCCccccccccc
Confidence 3444445555553 3999999999999988865
No 119
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=62.34 E-value=7.9 Score=24.41 Aligned_cols=59 Identities=25% Similarity=0.500 Sum_probs=41.6
Q ss_pred ccCcCCCCCCCCCCCCCC---------cEEEcCCCCCccccc--cccccccCcc--cccccCC-CceEEEecCCee
Q psy2974 7 RIEDKCNNCNESPHDTLT---------VFSKIGDSFKSQDKD--ECMTNNGGCQ--HECRNTI-GSYICSCHNGYT 68 (186)
Q Consensus 7 ~~~~~C~~c~~~~~~~~~---------Gy~~~~d~~~C~d~~--eC~~~~~~C~--~~C~n~~-g~~~C~C~~G~~ 68 (186)
+....||. +..|+...- ||.. ++..|...+ .|..+++.|. ..|.... ....|.|...+.
T Consensus 7 C~~tkcp~-NA~Cyr~~dg~EecRCllnykk--~~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~~ 79 (95)
T 1b9w_A 7 CIDTNVPE-NAACYRYLDGTEEWRCLLYFKE--DAGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEGS 79 (95)
T ss_dssp CSSCCCCT-TEEEEECTTSCEEEEECTTEEE--ETTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTTE
T ss_pred cccCCCCC-CcCeEEEcCCCEEEEEECCeEe--cCCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCCC
Confidence 44456666 677776532 8876 466787655 5888888995 6888776 688999987754
No 120
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=60.17 E-value=4.3 Score=29.15 Aligned_cols=27 Identities=37% Similarity=0.986 Sum_probs=18.6
Q ss_pred CcccccccC---CCceEEEecCCeeeeccccccc
Q psy2974 47 GCQHECRNT---IGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 47 ~C~~~C~n~---~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
.|...|.|. .+...|.|++||. |..|+
T Consensus 150 ~C~~~C~ngG~Cv~P~~C~C~~Gw~----G~~C~ 179 (188)
T 2ygo_A 150 ECPGGCRNGGFCNERRICECPDGFH----GPHCE 179 (188)
T ss_dssp CCTTCCCTTCEECTTSCEECCTTCB----TTTTC
T ss_pred ccCCCCCCCCEeCCCCcccCcCCCC----CCCCc
Confidence 455566553 2456799999997 77775
No 121
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=52.51 E-value=19 Score=31.28 Aligned_cols=42 Identities=26% Similarity=0.681 Sum_probs=28.0
Q ss_pred cEEEcCCCCCcc---ccccccccc-cCcc--cccccCCCceEEEe-cCCeeeecccccccc
Q psy2974 25 VFSKIGDSFKSQ---DKDECMTNN-GGCQ--HECRNTIGSYICSC-HNGYTLLENGHDCKE 78 (186)
Q Consensus 25 Gy~~~~d~~~C~---d~~eC~~~~-~~C~--~~C~n~~g~~~C~C-~~G~~l~~~~~~C~~ 78 (186)
||. |..|+ ++++|...+ ..|. +.|.+ ..|.| ++||. +..|..
T Consensus 552 Gy~----G~~CeC~~~~~~C~~~~g~~C~~~G~C~~----g~C~C~~~Gy~----G~~Ce~ 600 (690)
T 3fcs_B 552 DWT----GYYCNCTTRTDTCMSSNGLLCSGRGKCEC----GSCVCIQPGSY----GDTCEK 600 (690)
T ss_dssp TEE----SSSSCEECCCTTTBCTTSSBTSSSCEEET----TEEECCSTTCB----STTSCB
T ss_pred CCc----CCCCccCCCCCcccCCCCCCCCCCCEEeC----CEEECCCCCcc----CCCcCc
Confidence 887 77776 567787532 3463 46755 28999 89986 556653
No 122
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=51.94 E-value=9.9 Score=23.20 Aligned_cols=23 Identities=39% Similarity=1.096 Sum_probs=16.3
Q ss_pred ccc--cCCCceEEEecCCeeeeccccccc
Q psy2974 51 ECR--NTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 51 ~C~--n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
.|. ...+.+.|.|++||. +..|+
T Consensus 52 ~C~~i~~~~~~~C~C~~GYt----G~RCE 76 (79)
T 1xdt_R 52 ECKYVKELRAPSCICHPGYH----GERCH 76 (79)
T ss_dssp EECCBGGGTBCCEEECTTEE----STTCC
T ss_pred EeeeecCCCCeEEEcCCCcc----ccccc
Confidence 563 333678999999997 65553
No 123
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=49.34 E-value=8.2 Score=21.29 Aligned_cols=23 Identities=39% Similarity=0.986 Sum_probs=16.6
Q ss_pred cccc--CCCceEEEecCCeeeeccccccc
Q psy2974 51 ECRN--TIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 51 ~C~n--~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
+|.- ....+.|.|++||. |..|.
T Consensus 20 ~C~~~~~~~~~~C~C~~gy~----G~RCe 44 (50)
T 3e50_C 20 TCRFLVQEDKPACVCHSGYV----GARCE 44 (50)
T ss_pred EEeeccCCCCeEEECCCCCc----ccCCC
Confidence 5653 33678999999997 66664
No 124
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=47.24 E-value=12 Score=24.58 Aligned_cols=19 Identities=16% Similarity=0.572 Sum_probs=14.5
Q ss_pred cccccCC--Cce-EEEecCCee
Q psy2974 50 HECRNTI--GSY-ICSCHNGYT 68 (186)
Q Consensus 50 ~~C~n~~--g~~-~C~C~~G~~ 68 (186)
++|.+.. .+| .|.|++||.
T Consensus 7 gtC~~~~~~~~~~~C~Cp~g~~ 28 (122)
T 2fd6_A 7 GTCVSNKYFSNIHWCNCPKKFG 28 (122)
T ss_dssp CEEEECTTTTTCEEEECCTTEE
T ss_pred CCcCCCcccCCCCCccCCCCCC
Confidence 4677763 556 899999996
No 125
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=44.27 E-value=12 Score=32.37 Aligned_cols=29 Identities=28% Similarity=0.759 Sum_probs=20.9
Q ss_pred cccccccCcccccccCCCceE---EEecCCee
Q psy2974 40 ECMTNNGGCQHECRNTIGSYI---CSCHNGYT 68 (186)
Q Consensus 40 eC~~~~~~C~~~C~n~~g~~~---C~C~~G~~ 68 (186)
+|...+......|.+..|.+. |.|++||.
T Consensus 436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~ 467 (690)
T 3fcs_B 436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWL 467 (690)
T ss_dssp GGGTTCCTTCTTTTTTSEEEETTEEEECTTCC
T ss_pred CCcCCCCCCCCcccCCCCeEeCCceEeCCCcc
Confidence 454433233468988889998 99999997
No 126
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=43.84 E-value=12 Score=18.47 Aligned_cols=16 Identities=44% Similarity=1.059 Sum_probs=11.3
Q ss_pred EEecCCeeeeccccccc
Q psy2974 61 CSCHNGYTLLENGHDCK 77 (186)
Q Consensus 61 C~C~~G~~l~~~~~~C~ 77 (186)
|.|++||.....+ .|.
T Consensus 7 C~C~~G~vrn~~G-~CV 22 (32)
T 3ssb_I 7 CYCEDGYARDVNG-KCI 22 (32)
T ss_dssp EEECTTEEECTTS-CEE
T ss_pred CCcCCCcEECCCC-CEE
Confidence 8999999876533 353
No 127
>1e0f_I Haemadin, factor IIA; coagulation//heparin-B, coagulation/crystal structure/heparin-binding site/ hirudin/thrombin inhibitor; 3.1A {Haemadipsa sylvestris} SCOP: g.3.15.2
Probab=41.49 E-value=25 Score=18.86 Aligned_cols=32 Identities=28% Similarity=0.777 Sum_probs=20.6
Q ss_pred cccCCCceEEEecCCeeeeccccccccCCcceee
Q psy2974 52 CRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEI 85 (186)
Q Consensus 52 C~n~~g~~~C~C~~G~~l~~~~~~C~~~~C~~~~ 85 (186)
|....-+|.|.|....-+. +.+|.++.|.+.-
T Consensus 10 cpdgevgytcdcgekicly--gqscndgqcsgdp 41 (57)
T 1e0f_I 10 CPDGEVGYTCDCGEKICLY--GQSCNDGQCSGDP 41 (57)
T ss_dssp CCSSSCSSCEECSSSEECT--TCCBSSSCBCSCC
T ss_pred CCCCceeeeccCCceeeEe--cccccCCcccCCC
Confidence 4445557788887765544 5678777776553
No 128
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=40.59 E-value=4.4 Score=31.14 Aligned_cols=32 Identities=16% Similarity=0.200 Sum_probs=21.1
Q ss_pred CCCCCCCCC--------cEEEcCCCCCccccccccccccCcc
Q psy2974 16 NESPHDTLT--------VFSKIGDSFKSQDKDECMTNNGGCQ 49 (186)
Q Consensus 16 ~~~~~~~~~--------Gy~~~~d~~~C~d~~eC~~~~~~C~ 49 (186)
+..|+|+.+ ||. ++|..|.++++....++.|.
T Consensus 18 ~a~C~Nt~Gsy~C~C~~Gy~--GnG~~C~d~d~PqRvnGs~s 57 (285)
T 1gl4_A 18 HAECRDYATGFCCRCVANYT--GNGRQCVAEGSPQRVNGKVK 57 (285)
T ss_dssp TEEEEECSSCEEEEECTTEE--ECSSSEEETTCEEEEEEEEE
T ss_pred CCEeEcCCCCeEEEcCCCCC--CCCCcCCCCCCCceeceeEe
Confidence 345777766 665 57889999988554444443
No 129
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=38.45 E-value=18 Score=33.47 Aligned_cols=36 Identities=19% Similarity=0.637 Sum_probs=26.4
Q ss_pred ccccccccCcccccccCCCceEEEec-CCeeeecccccccc
Q psy2974 39 DECMTNNGGCQHECRNTIGSYICSCH-NGYTLLENGHDCKE 78 (186)
Q Consensus 39 ~eC~~~~~~C~~~C~n~~g~~~C~C~-~G~~l~~~~~~C~~ 78 (186)
+.|...+....+.|.....+|.|.|+ +||. +..|..
T Consensus 1018 ~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~----G~~C~~ 1054 (1245)
T 3qcw_A 1018 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFS----GPLCND 1054 (1245)
T ss_dssp CCCCTTSSSSSCEEEEETTEEEEECTTSSCB----STTSCB
T ss_pred CceECCcCCCCCEeCCCCCCCEEECCCCCCC----CCCccC
Confidence 45665443334689999999999999 5986 777853
No 130
>4b2u_A S67; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=38.14 E-value=34 Score=16.59 Aligned_cols=29 Identities=21% Similarity=0.441 Sum_probs=17.1
Q ss_pred CCcccccc-cccc--ccCcccccccCCCceEE
Q psy2974 33 FKSQDKDE-CMTN--NGGCQHECRNTIGSYIC 61 (186)
Q Consensus 33 ~~C~d~~e-C~~~--~~~C~~~C~n~~g~~~C 61 (186)
.+|.+..| |..+ ...|-|.|+.....|+|
T Consensus 2 tycielgercpnpregdwcchkcvpegkrfyc 33 (36)
T 4b2u_A 2 TYCIELGERCPNPREGDWCCHKCVPEGKRFYC 33 (36)
T ss_dssp CSSCCTTSBCCCGGGCCSSSSEEEEETTEEEE
T ss_pred ceeeeccccCcCCCccCeeeecccccCceeee
Confidence 45666655 5432 23577788766666666
No 131
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=37.88 E-value=22 Score=32.94 Aligned_cols=36 Identities=31% Similarity=0.876 Sum_probs=25.9
Q ss_pred cccccccccCcccccccCCCceEEEec-CCeeeeccccccc
Q psy2974 38 KDECMTNNGGCQHECRNTIGSYICSCH-NGYTLLENGHDCK 77 (186)
Q Consensus 38 ~~eC~~~~~~C~~~C~n~~g~~~C~C~-~G~~l~~~~~~C~ 77 (186)
.+.|...+....+.|.+...+|.|.|+ .||. +..|.
T Consensus 619 ~~~C~~~pC~ngg~C~~~~~~~~C~C~~~g~~----G~~C~ 655 (1245)
T 3qcw_A 619 AKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYL----GRSCE 655 (1245)
T ss_dssp SCGGGSCCCCTTCEEEECSSSEEEECTTTTEE----STTSC
T ss_pred CCCCCccCCCCCCEEeCCCCCeEEECCCCCcc----cccCc
Confidence 355665433334689999999999999 7987 66664
No 132
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=34.84 E-value=25 Score=27.25 Aligned_cols=11 Identities=36% Similarity=1.141 Sum_probs=9.9
Q ss_pred ceEEEecCCee
Q psy2974 58 SYICSCHNGYT 68 (186)
Q Consensus 58 ~~~C~C~~G~~ 68 (186)
.+.|.|++||.
T Consensus 164 ~~~C~C~~G~~ 174 (324)
T 2ygq_A 164 RRICECPDGFH 174 (324)
T ss_dssp TSCEECCTTEE
T ss_pred CCeEECCCCCc
Confidence 58899999997
No 133
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=31.78 E-value=26 Score=25.58 Aligned_cols=38 Identities=29% Similarity=0.633 Sum_probs=24.4
Q ss_pred CCCcc-ccccccccc-cCcc----cccccCCCceEEEecCCeeeeccccccc
Q psy2974 32 SFKSQ-DKDECMTNN-GGCQ----HECRNTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 32 ~~~C~-d~~eC~~~~-~~C~----~~C~n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
|..|+ ++++|.... ..|. +.|.. ..|.|.+||. +..|.
T Consensus 170 G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~~----G~~C~ 213 (217)
T 2p28_B 170 GQYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFE----GSACQ 213 (217)
T ss_dssp STTSCEESSCSCEETTEETTCTTTEEEET----TEEEECTTEE----STTSC
T ss_pred CCCcccCCccCCCCCCCCCCCCCCcEEeC----CeeECCCCCc----cCCcC
Confidence 77886 456776532 1353 45764 3799999997 55553
No 134
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=28.70 E-value=33 Score=23.29 Aligned_cols=24 Identities=21% Similarity=0.786 Sum_probs=16.7
Q ss_pred cccccC--CCce-EEEecCCeeeeccccccc
Q psy2974 50 HECRNT--IGSY-ICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 50 ~~C~n~--~g~~-~C~C~~G~~l~~~~~~C~ 77 (186)
+.|... ...+ .|.|++||. +..|.
T Consensus 19 GtC~~~~~~s~~~~C~Cp~g~~----G~~Ce 45 (145)
T 2i9a_A 19 GTCVSNKYFSNIHWCNCPKKFG----GQHCE 45 (145)
T ss_dssp CEEEECSSSTTCEEEECCTTEE----STTSC
T ss_pred CCcCCCccccCCccccCCCCCC----CCcee
Confidence 567654 3556 899999997 55553
No 135
>2p3f_N Anti-coagulant protein 5; factor XA, hydrolase; 3.10A {Ancylostoma caninum}
Probab=26.36 E-value=31 Score=20.73 Aligned_cols=18 Identities=28% Similarity=0.628 Sum_probs=13.7
Q ss_pred EEEecCCeeeeccccccc
Q psy2974 60 ICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 60 ~C~C~~G~~l~~~~~~C~ 77 (186)
-|.|++||.+..+...|.
T Consensus 48 GC~C~~G~vr~~~~g~CV 65 (78)
T 2p3f_N 48 ACVCKDGFYRDTVIGDCV 65 (78)
T ss_dssp EEEECSSCEEETTTTEEE
T ss_pred CcCcCCCEeEcCCCCceE
Confidence 499999999876534675
No 136
>1ccv_A AMCI, chymotrypsin inhibitor; protein inhibitor, hemolymph, canonical inhibitor, hydrolase inhibitor; NMR {Apis mellifera} SCOP: g.22.1.1
Probab=24.24 E-value=34 Score=18.86 Aligned_cols=25 Identities=28% Similarity=0.733 Sum_probs=16.0
Q ss_pred CcccccccCCCceEEEecCCeeeeccccccc
Q psy2974 47 GCQHECRNTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 47 ~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
.|...|+. -|.|++||.+..+ ..|.
T Consensus 27 ~C~~~C~~-----GC~C~~G~v~~~~-g~CV 51 (56)
T 1ccv_A 27 ICTMQCRI-----GCQCQEGFLRNGE-GACV 51 (56)
T ss_dssp CSSSSCEE-----EEEECTTCEEETT-TEEE
T ss_pred CCcCcCCC-----CCcCCCCeeECCC-Cccc
Confidence 45555542 2999999998653 3554
No 137
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=22.45 E-value=42 Score=29.08 Aligned_cols=41 Identities=29% Similarity=0.738 Sum_probs=23.8
Q ss_pred cEEEcCCCCCcc---ccccccccc-cCcc--cccccCCCceEEEecCCeeeeccccccc
Q psy2974 25 VFSKIGDSFKSQ---DKDECMTNN-GGCQ--HECRNTIGSYICSCHNGYTLLENGHDCK 77 (186)
Q Consensus 25 Gy~~~~d~~~C~---d~~eC~~~~-~~C~--~~C~n~~g~~~C~C~~G~~l~~~~~~C~ 77 (186)
||. |..|+ ++++|.... ..|. +.|.. ..|.|.+||. +..|.
T Consensus 545 G~~----G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~----g~C~C~~Gy~----G~~Ce 591 (687)
T 3k6s_B 545 GFE----GSACQCERTTEGCLNPRRVECSGRGRCRC----NVCECHSGYQ----LPLCQ 591 (687)
T ss_dssp TCC----STTSCSCCSSCTTBCTTCSBTSSSCCBCS----SCBCCSTTCC----TTTTC
T ss_pred CCc----CCCCccCCCCCCCCCCCCCCCCCCCcCCC----CEEECCCCCc----CCCCC
Confidence 665 66665 245565421 2453 45654 4688888886 55664
No 138
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=20.79 E-value=89 Score=25.75 Aligned_cols=12 Identities=25% Similarity=0.418 Sum_probs=8.6
Q ss_pred CceEEEecCCee
Q psy2974 57 GSYICSCHNGYT 68 (186)
Q Consensus 57 g~~~C~C~~G~~ 68 (186)
..+.|.|++||.
T Consensus 458 ~tg~C~C~~g~~ 469 (525)
T 4aqs_A 458 ETGYCYCKRLVT 469 (525)
T ss_dssp TTCCBCBCTTCC
T ss_pred CCCEEECCCCCc
Confidence 345688888885
No 139
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=20.18 E-value=22 Score=28.94 Aligned_cols=25 Identities=36% Similarity=0.918 Sum_probs=0.0
Q ss_pred ccccCCCceEEEecCCeeeeccccccccCCcc
Q psy2974 51 ECRNTIGSYICSCHNGYTLLENGHDCKEGGCK 82 (186)
Q Consensus 51 ~C~n~~g~~~C~C~~G~~l~~~~~~C~~~~C~ 82 (186)
.|.+.. .|.|++||. +..|+...|.
T Consensus 378 ~C~~~~---~C~C~~G~~----G~~Ce~c~C~ 402 (426)
T 3zyj_B 378 TCHNNV---RCLCPAAYT----GILCEKLRCE 402 (426)
T ss_dssp --------------------------------
T ss_pred CcCCCC---CCcCCCCCc----CCCCcCCCCC
Confidence 465544 899999997 5567655553
Done!