RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2974
(186 letters)
>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human
(Homo sapiens) [TaxId: 9606]}
Length = 51
Score = 59.4 bits (144), Expect = 2e-13
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 41 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 77
C +NG C C S +CSC GYTL +NG C
Sbjct: 3 CSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACI 39
>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 50
Score = 58.3 bits (141), Expect = 6e-13
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 41 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78
C +NGGC H C +G CSC GY L ++ C
Sbjct: 2 CSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHP 39
>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos
taurus) [TaxId: 9913]}
Length = 51
Score = 57.9 bits (140), Expect = 1e-12
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 41 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78
C +NGGC CR CSC +GY L ++ C
Sbjct: 1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVS 38
>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 41
Score = 57.1 bits (138), Expect = 1e-12
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 39 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 77
DEC + C C N G Y C C G+ L + CK
Sbjct: 2 DEC-QDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK 39
>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 40
Score = 57.1 bits (138), Expect = 2e-12
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 39 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 77
+EC+ NNGGC H C + Y C C +G+ L+ C+
Sbjct: 3 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLV-AQRRCE 40
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 55.6 bits (134), Expect = 6e-12
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 36 QDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDC 76
+D DEC G CQ +C NT GS+ C C GY L E+ C
Sbjct: 1 EDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42
>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated
serine protease 2, MASP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 45
Score = 55.7 bits (134), Expect = 6e-12
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 39 DECMTNNG---GCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78
DEC G C H C N +G + CSC GY L N C E
Sbjct: 2 DECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 44
>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 55.6 bits (134), Expect = 7e-12
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 41 CMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDCKE 78
C+ NGGC+ C + G C CH GY+LL +G C
Sbjct: 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 40
>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated
serine protease 2, MASP2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 45
Score = 54.9 bits (132), Expect = 1e-11
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 39 DECMTNNGG---CQHECRNTIGSYICSCHNGYTLLENGHDCK 77
DEC T+ G C H C N +G Y CSC GY L +N H C
Sbjct: 2 DECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCS 43
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 42
Score = 54.1 bits (130), Expect = 2e-11
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 37 DKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTLLENGHDC 76
D DEC + C+ C NT GSY C C G+ L N C
Sbjct: 1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC 41
>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human
(Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 54.1 bits (130), Expect = 2e-11
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 39 DECMT-NNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 77
+EC + C H C N IG Y CSC Y L ++ +C
Sbjct: 1 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCG 40
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 54.1 bits (130), Expect = 2e-11
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 76
D +EC+ C NT GSYIC C + L C
Sbjct: 2 DVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGC 41
>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 57
Score = 54.4 bits (131), Expect = 2e-11
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 41 CMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDCKE 78
C NG C+ C+N+ +CSC GY L EN C+
Sbjct: 3 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEP 41
>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 53.4 bits (128), Expect = 4e-11
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Query: 37 DKDECMTNNGGC--------QHECRNTIGSYICSCHNGYTLLENGHDCK 77
D DEC + + QH C N +G Y CSC GY L E+ H C+
Sbjct: 3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ 51
>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 50
Score = 52.3 bits (125), Expect = 1e-10
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 6/44 (13%)
Query: 39 DECMTNNGGCQHEC------RNTIGSYICSCHNGYTLLENGHDC 76
+ +NGGCQ+ C + C+C +G L + C
Sbjct: 5 ERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSC 48
>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 40
Score = 50.9 bits (122), Expect = 3e-10
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLL-ENGHDC 76
D DEC N G C C N G++ C C L + G DC
Sbjct: 1 DIDEC-ENGGFCSGVCHNLPGTFECICGPDSALAGQIGTDC 40
>d1nt0a2 b.23.1.1 (A:165-278) Mannose-binding protein associated
serine protease 2, MASP2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 114
Score = 51.9 bits (123), Expect = 9e-10
Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 37/106 (34%)
Query: 86 TAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN----------------------- 122
T +G + +P +P YP C ++ G I L+
Sbjct: 7 TGRSGFLSSPEYPQPYPKLSSCAYNIRLEEGFSITLDFVESFDVEMHPEAQCPYDSLKIQ 66
Query: 123 --------------PTDIISISEGLLVRFRSDDTVVGKGFSASYIA 154
P I + S + + F +D++ G+ Y +
Sbjct: 67 TDKREYGPFCGKTLPPRIETDSNKVTITFTTDESGNHTGWKIHYTS 112
>d1szba1 b.23.1.1 (A:3-123) Mannose-binding protein associated
serine protease 2, MASP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 121
Score = 51.8 bits (123), Expect = 1e-09
Identities = 23/113 (20%), Positives = 33/113 (29%), Gaps = 44/113 (38%)
Query: 88 PNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN------------------------- 122
G + +P P Y + +E W T PG+R++L
Sbjct: 9 VFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSHLCEYDFVKLSSGAKV 68
Query: 123 -----------------PTDIISISEGLLVRFRSDDTV--VGKGFSASYIAID 156
S+ L + FRSD + GF A Y A D
Sbjct: 69 LATLCGQESTDTERAPGKDTFYSLGSSLDITFRSDYSNEKPFTGFEAFYAAED 121
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 49.0 bits (117), Expect = 2e-09
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 76
D DEC + +C NT GSY C C GY L G++C
Sbjct: 4 DMDECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNEC 41
>d1nzia1 b.23.1.1 (A:1-117) Complement C1S component {Human (Homo
sapiens) [TaxId: 9606]}
Length = 117
Score = 51.0 bits (121), Expect = 2e-09
Identities = 24/111 (21%), Positives = 34/111 (30%), Gaps = 44/111 (39%)
Query: 90 GVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN--------------------------- 122
G I +PN+P YPS+ E W G+ I L
Sbjct: 6 GEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEEG 65
Query: 123 ---------------PTDIISISEGLLVRFRSDDTVVGK--GFSASYIAID 156
+ L V F+SD + + GF+A Y+A D
Sbjct: 66 RLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATD 116
>d2qqma3 b.23.1.1 (A:156-263) Mannose-binding protein associated
serine protease 2, MASP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 108
Score = 50.7 bits (120), Expect = 2e-09
Identities = 24/107 (22%), Positives = 33/107 (30%), Gaps = 44/107 (41%)
Query: 90 GVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN--------------------------- 122
GVIK+P P+ YP+ EC + I L
Sbjct: 1 GVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWD 60
Query: 123 -----------------PTDIISISEGLLVRFRSDDTVVGKGFSASY 152
P I S S L + F +D + +GFSA+Y
Sbjct: 61 GFPDVGPHIGRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGFSANY 107
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 44
Score = 46.4 bits (110), Expect = 2e-08
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 37 DKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTL-LENGHDC 76
D DEC + C +C NT G + C C GY +C
Sbjct: 2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC 43
>d1sfpa_ b.23.1.1 (A:) Acidic seminal fluid protein (ASFP) {Cow (Bos
taurus) [TaxId: 9913]}
Length = 111
Score = 44.6 bits (104), Expect = 4e-07
Identities = 14/111 (12%), Positives = 28/111 (25%), Gaps = 37/111 (33%)
Query: 77 KEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT------------ 124
+ C + +GVI T Y K C+W P + ++++
Sbjct: 3 RNTNCGGILKEESGVIATY-----YGPKTNCVWTIQMPPEYHVRVSIQYLQLNCNKESLE 57
Query: 125 --------------------DIISISEGLLVRFRSDDTVVGKGFSASYIAI 155
D S + V++ + + Y
Sbjct: 58 IIDGLPGSPVLGKICEGSLMDYRSSGSIMTVKYIREPEHPASFYEVLYFQD 108
>d1sppa_ b.23.1.1 (A:) Major seminal plasma glycoprotein PSP-I {Pig
(Sus scrofa) [TaxId: 9823]}
Length = 109
Score = 44.2 bits (103), Expect = 5e-07
Identities = 14/105 (13%), Positives = 30/105 (28%), Gaps = 36/105 (34%)
Query: 81 CKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNP----------------- 123
C +T G I T P EC+W P +++ ++
Sbjct: 6 CGGRLTDDYGTIFTYKGPK-----TECVWTLQVDPKYKLLVSIPTLNLTCGKEYVEVLEG 60
Query: 124 --------------TDIISISEGLLVRFRSDDTVVGKGFSASYIA 154
+ + S G+ V+++ D + ++
Sbjct: 61 APGSKSLGKFCEGLSILNRGSSGMTVKYKRDSGHPASPYEIIFLR 105
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog
protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 39.7 bits (93), Expect = 6e-06
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Query: 36 QDKDECMTNNGGCQH--ECRNTIGSYICSCHNGYTLLENGHDC 76
QD DEC C+H +C NT+GS+ C C GYT G C
Sbjct: 1 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRC 39
>d1sppb_ b.23.1.1 (B:) Major seminal plasma glycoprotein PSP-II {Pig
(Sus scrofa) [TaxId: 9823]}
Length = 112
Score = 40.8 bits (94), Expect = 9e-06
Identities = 9/107 (8%), Positives = 22/107 (20%), Gaps = 37/107 (34%)
Query: 80 GCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPTDII------------ 127
C I +G I + C W P ++++ +
Sbjct: 8 ECGRVIKDTSGSISNTDRQKNL-----CTWTILMKPDQKVRMAIPYLNLACGKEYVEVFD 62
Query: 128 --------------------SISEGLLVRFRSDDTVVGKGFSASYIA 154
S + + +++ F +
Sbjct: 63 GLLSGPSYGKLCAGAAIVFLSTANTMTIKYNRISGNSSSPFLIYFYG 109
>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 40
Score = 34.4 bits (79), Expect = 5e-04
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 4/38 (10%)
Query: 41 CMTNNGGC--QHECRNTIGSYICSCHNGYTLLENGHDC 76
C N C ECR+ + C C YT NG C
Sbjct: 2 CANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQC 37
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 39
Score = 33.1 bits (76), Expect = 0.001
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 6/35 (17%)
Query: 37 DKDECMTN---NGGCQHECRNTIGSYICSCHNGYT 68
D D+C +N NGG C++ I SY C C G+
Sbjct: 2 DGDQCESNPCLNGGS---CKDDINSYECWCPFGFE 33
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 37
Score = 32.4 bits (74), Expect = 0.003
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 6/35 (17%)
Query: 37 DKDECMTN---NGGCQHECRNTIGSYICSCHNGYT 68
D D+C ++ NGG C++ + SYIC C +
Sbjct: 1 DGDQCASSPCQNGGS---CKDQLQSYICFCLPAFE 32
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human
(Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 30.8 bits (70), Expect = 0.008
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 6/33 (18%)
Query: 39 DECMTN---NGGCQHECRNTIGSYICSCHNGYT 68
D+C T+ N G C++ +G Y C+C G+
Sbjct: 1 DQCETSPCQNQGK---CKDGLGEYTCTCLEGFE 30
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog
protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 30.0 bits (68), Expect = 0.018
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Query: 39 DECMTNNGGCQH--ECRNTIGSYICSCHNGYT 68
+EC++N CQ+ C + IG + C C GY
Sbjct: 2 NECVSNP--CQNDATCLDQIGEFQCICMPGYE 31
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog
protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 35
Score = 29.6 bits (67), Expect = 0.022
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
Query: 39 DECMTNNGGCQH--ECRNTIGSYICSCHNGYT 68
DEC ++ C H C + I + C C G+T
Sbjct: 1 DECASSP--CLHNGRCLDKINEFQCECPTGFT 30
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 28.6 bits (64), Expect = 0.056
Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 10/43 (23%)
Query: 39 DECMTN---NGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78
C G C TI +Y C C G++ G C++
Sbjct: 2 AACTNTSCSGHGE---CVETINNYTCKCDPGFS----GLKCEQ 37
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 40
Score = 27.8 bits (62), Expect = 0.12
Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 6/33 (18%)
Query: 39 DECMTN---NGGCQHECRNTIGSYICSCHNGYT 68
C G C TIG+Y CSC+ G+
Sbjct: 2 ASCQDMSCSKQGE---CLETIGNYTCSCYPGFY 31
>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 39
Score = 27.2 bits (60), Expect = 0.15
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 39 DECMTNNGGCQHECRNTIGSYICSCHNGY 67
DEC N C+N IG + C+C G+
Sbjct: 2 DECSVGNPCGNGTCKNVIGGFECTCEEGF 30
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 48
Score = 27.1 bits (60), Expect = 0.21
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Query: 37 DKDECMTNNGGCQH-ECRNTIGSYICSCHNGYT 68
+ C + C H C + IGS+ C C +G+
Sbjct: 7 LEHPCASLC--CGHGTCIDGIGSFSCDCRSGWE 37
>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 46
Score = 26.3 bits (58), Expect = 0.49
Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 4/35 (11%)
Query: 34 KSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYT 68
S C+ +G C + + C C GYT
Sbjct: 7 SSDMNGYCL--HGQCIYL--VDMSQNYCRCEVGYT 37
>d1wlna1 b.26.1.2 (A:8-114) Afadin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 107
Score = 27.0 bits (59), Expect = 0.75
Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Query: 117 HRIKLNPTDIISISEGLLVRFRSDDTVVGKGFSAS-YIAIDTQG-SKEFSEIDDDDEDED 174
+ ++L+P S + L R + T VG I + G ++ + D
Sbjct: 6 YLVELSPDGSDSRDKPKLYRLQLSVTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMDGVVT 65
Query: 175 NTDLNSRRGNY 185
T + Y
Sbjct: 66 VTPRSMDAETY 76
>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 63
Score = 25.3 bits (55), Expect = 1.4
Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 5/35 (14%)
Query: 39 DECMTN---NGGC--QHECRNTIGSYICSCHNGYT 68
E NGG + + Y+C C G+T
Sbjct: 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFT 41
>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human
(Homo sapiens) [TaxId: 9606]}
Length = 49
Score = 24.0 bits (52), Expect = 3.0
Identities = 8/35 (22%), Positives = 11/35 (31%), Gaps = 4/35 (11%)
Query: 34 KSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYT 68
C +G C+ C CH+GY
Sbjct: 8 PDSHTQFCF--HGTCRF--LVQEDKPACVCHSGYV 38
>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 50
Score = 23.6 bits (51), Expect = 4.2
Identities = 9/35 (25%), Positives = 12/35 (34%), Gaps = 4/35 (11%)
Query: 34 KSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYT 68
Q K C+ G C+ + C C GY
Sbjct: 9 PKQYKHYCI--KGRCRF--VVAEQTPSCVCDEGYI 39
>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 53
Score = 23.3 bits (50), Expect = 5.2
Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Query: 44 NNGGCQHECRNTIGSYICSCHNGYT 68
N G C H ++ SY C+C GY+
Sbjct: 16 NGGVCMH--IESLDSYTCNCVIGYS 38
>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo
sapiens) [TaxId: 9606]}
Length = 48
Score = 22.9 bits (49), Expect = 8.3
Identities = 7/25 (28%), Positives = 12/25 (48%), Gaps = 2/25 (8%)
Query: 44 NNGGCQHECRNTIGSYICSCHNGYT 68
++G C + + Y C+C GY
Sbjct: 14 HDGVCMY--IEALDKYACNCVVGYI 36
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 24.3 bits (52), Expect = 8.8
Identities = 13/74 (17%), Positives = 17/74 (22%), Gaps = 4/74 (5%)
Query: 44 NNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK-EGGCKYEITAPNGVIKTP---NHPD 99
N E S I + D E G +T I+
Sbjct: 122 NKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTA 181
Query: 100 YYPSKRECIWHFTT 113
+ C HFT
Sbjct: 182 SGDGRHYCYPHFTC 195
>d1wdva_ d.116.1.1 (A:) Hypothetical protein APE2540 {Aeropyrum
pernix [TaxId: 56636]}
Length = 150
Score = 24.2 bits (52), Expect = 9.7
Identities = 10/129 (7%), Positives = 29/129 (22%), Gaps = 9/129 (6%)
Query: 8 IEDKCNNCNESPHDTLTVFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGY 67
+ + S + + + R I S
Sbjct: 26 VAEAAALLGVSESEIVKTLI-----VLDNAGGVYAV---VIPGDKRLNINSMKELAGKPV 77
Query: 68 TLLENGHDCKEGGCKYEITAPNGVIK-TPNHPDYYPSKRECIWHFTTTPGHRIKLNPTDI 126
L + G P + D R+ ++ ++ +P ++
Sbjct: 78 RLARANEVVELTGYPVGGVPPVALPPNIVLVVDRILLSRKKVYGGGGRENALLEFSPREL 137
Query: 127 ISISEGLLV 135
+ + ++
Sbjct: 138 VEATGAVVA 146
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.136 0.427
Gapped
Lambda K H
0.267 0.0607 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 743,342
Number of extensions: 35327
Number of successful extensions: 169
Number of sequences better than 10.0: 1
Number of HSP's gapped: 152
Number of HSP's successfully gapped: 84
Length of query: 186
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 106
Effective length of database: 1,309,196
Effective search space: 138774776
Effective search space used: 138774776
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 50 (23.3 bits)