RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2979
(400 letters)
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1,
KEAP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 288
Score = 101 bits (250), Expect = 7e-25
Identities = 87/287 (30%), Positives = 131/287 (45%), Gaps = 14/287 (4%)
Query: 110 NVIIAVGGEDDKVVLRSVEGFCVKTKVWKTLSCLPFAISKHGLVVSG---------RNTI 160
+I GG + L +E + W L+ L S V G N+
Sbjct: 5 RLIYTAGGYFRQS-LSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSP 63
Query: 161 YCLDIVDIVYVAASMHKILHSLGSLKFDFDVSGIAMLDGFVYAVGGWDGSCRLDSVERYD 220
+ M + + G+ ++DG +YAVGG G +SVERY+
Sbjct: 64 DGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYE 123
Query: 221 PTKNEWSYIEPMKLAVTSPAVVAHEGMLYVTGGAILEDGDGIEQVQRYNPKVNQWQDLAP 280
P ++EW + PM V +LY GG + + + + Y P+ N+W+ +
Sbjct: 124 PERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGF--DGTNRLNSAECYYPERNEWRMITA 181
Query: 281 MLIPRSGAAICALDSCIYVLGGWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAV 340
M RSGA +C L +CIY GG+ + N VE Y + TW + +PMK +R GI V
Sbjct: 182 MNTIRSGAGVCVLHNCIYAAGGYDGQ-DQLNSVERYDVETETWTFVAPMKHRRSALGITV 240
Query: 341 IDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMSHLPSARSWLGCV 387
G+IYVLGG +G + DS+ECYD D D+W ++ + S RS +G
Sbjct: 241 HQGRIYVLGGYDGHT-FLDSVECYDPDTDTWSEVTRMTSGRSGVGVA 286
Score = 74.9 bits (182), Expect = 1e-15
Identities = 52/145 (35%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 196 MLDGFVYAVGGWDGSCRLDSVERYDPTKNEWSYIEPMKLAVTSPAVVAHEGMLYVTGGAI 255
+L+ +YAVGG+DG+ RL+S E Y P +NEW I M + V +Y GG
Sbjct: 146 VLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYD 205
Query: 256 LEDGDGIEQVQRYNPKVNQWQDLAPMLIPRSGAAICALDSCIYVLGGWHASTENTNRVEC 315
D + V+RY+ + W +APM RS I IYVLGG+ T + VEC
Sbjct: 206 --GQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHT-FLDSVEC 262
Query: 316 YHIAENTWEYKSPMKEKRYRPGIAV 340
Y +TW + M R G+AV
Sbjct: 263 YDPDTDTWSEVTRMTSGRSGVGVAV 287
Score = 68.4 bits (165), Expect = 2e-13
Identities = 40/197 (20%), Positives = 73/197 (37%), Gaps = 3/197 (1%)
Query: 197 LDGFVYAVGGWDGSCRLDSVERYDPTKNEWSYIEPMKLAVTSPAVVAHEGMLYVTGGAIL 256
+ +Y GG+ L +E Y+P+ W + +++ + A G+LY GG
Sbjct: 3 VGRLIYTAGGYF-RQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNN 61
Query: 257 -EDGDGIEQVQRYNPKVNQWQDLAPMLIPRSGAAICALDSCIYVLGGWHASTENTNRVEC 315
DG+ + + + G + N VE
Sbjct: 62 SPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVER 121
Query: 316 YHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMS 375
Y + W +PM +R G+AV++ +Y +GG +S ECY + + W +++
Sbjct: 122 YEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGG-FDGTNRLNSAECYYPERNEWRMIT 180
Query: 376 HLPSARSWLGCVPLQIH 392
+ + RS G L
Sbjct: 181 AMNTIRSGAGVCVLHNC 197
Score = 40.7 bits (93), Expect = 2e-04
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Query: 95 HITPRTKPRKSAGSI---NVIIAVGGEDDKVVLRSVEGFCVKTKVWKTLSCLPFAISKHG 151
+ P R + G I +GG D L SVE + T W ++ + S G
Sbjct: 225 FVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVG 284
Query: 152 LVVS 155
+ V+
Sbjct: 285 VAVT 288
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain
{Fungi (Fusarium sp.) [TaxId: 29916]}
Length = 387
Score = 77.9 bits (190), Expect = 2e-16
Identities = 25/190 (13%), Positives = 50/190 (26%), Gaps = 20/190 (10%)
Query: 196 MLDGFVYAVGGWDGSCRLDSVERYDPTKNEWSYIEPMKLAV----TSPAVVAHEGMLYVT 251
G V+ G + D + A +G +
Sbjct: 190 WKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTF 249
Query: 252 GGAILEDGDGIEQVQRY------NPKVNQWQDLAPMLIPRSG-AAICALDSCIYVLGGWH 304
GG+ N + R+ ++ D ++ GG
Sbjct: 250 GGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQR 309
Query: 305 AST-----ENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVI--DGKIYVLGGEEGWDGY 357
E Y ++T+ ++P R I+++ DG+++ GG D
Sbjct: 310 RGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCT 369
Query: 358 --HDSIECYD 365
H + +
Sbjct: 370 TNHFDAQIFT 379
Score = 76.0 bits (185), Expect = 9e-16
Identities = 27/210 (12%), Positives = 56/210 (26%), Gaps = 18/210 (8%)
Query: 192 SGIAMLDGFVYAVGGWDGS------CRLDSVERYDPTKNEWSYIEPMKLAVTSPAVVAHE 245
+ I G V + + +DP+ S T +
Sbjct: 24 AAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTV---TKHDMFCPG 80
Query: 246 GMLYVTGGAILEDGDGIEQVQRYNPKVNQWQDLAPMLIPRSGAAICALDS-CIYVLGGWH 304
+ G ++ G+ ++ Y+ + W M + R + + ++ +GG
Sbjct: 81 ISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSW 140
Query: 305 ASTENTNRVECYHIAENTWEYKSPMKEKRYRP----GIAVIDGKIYVLGGEEGW----DG 356
+ E Y + TW K G+ D ++ G ++G
Sbjct: 141 SGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGP 200
Query: 357 YHDSIECYDVDNDSWEIMSHLPSARSWLGC 386
Y + + S R
Sbjct: 201 STAMNWYYTSGSGDVKSAGKRQSNRGVAPD 230
Score = 72.9 bits (177), Expect = 8e-15
Identities = 35/319 (10%), Positives = 82/319 (25%), Gaps = 41/319 (12%)
Query: 112 IIAVGGED------DKVVLRSVEGFCVKTKVWKTLSCLPFAISKH--GLVVSGRNTIYCL 163
++ + + T + + G+ + G I
Sbjct: 33 VLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVT 92
Query: 164 DIVDI----VYVAASMHKILHSLGSLKFDFDVSGIAMLDGFVYAVGGWDGSCRLDSVERY 219
D +Y ++S I + + S G W G + E Y
Sbjct: 93 GGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVY 152
Query: 220 DPTKNEWSYIEPMK----LAVTSPAVVAHEGMLYV---TGGAILEDGDGIEQVQRYNPKV 272
P+ W+ + K L + + ++ G++ + G Y
Sbjct: 153 SPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGS 212
Query: 273 NQWQDLAPMLIPRSGAAICALDSCIYVL----------------GGWHASTENTNRVECY 316
+ R A + + + + +
Sbjct: 213 GDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEP 272
Query: 317 HIAENTWEYKSPM-KEKRYRPGIAVIDGKIYVLGGEEGWDGYHD-----SIECYDVDNDS 370
+ NT + + + + + + DG ++ GG+ + D + E Y + D+
Sbjct: 273 GTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 332
Query: 371 WEIMSHLPSARSWLGCVPL 389
+ + R + L
Sbjct: 333 FYKQNPNSIVRVYHSISLL 351
Score = 66.8 bits (161), Expect = 8e-13
Identities = 25/172 (14%), Positives = 51/172 (29%), Gaps = 13/172 (7%)
Query: 221 PTKNEWSYIEPMKLAVTSPAVVAHEGMLYVTGG----AILEDGDGIEQVQRYNPKVNQWQ 276
P W + + + A+ G + + A GI ++P
Sbjct: 6 PGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVS 65
Query: 277 DLAPMLIPRSGAAICAL---DSCIYVLGGWHASTENTNRVECYHIAENTWEYKSPMKEKR 333
D + + I V GG + + Y + ++W M+ R
Sbjct: 66 DRTVTVTKHDMFCPGISMDGNGQIVVTGGN-----DAKKTSLYDSSSDSWIPGPDMQVAR 120
Query: 334 YRPGIAV-IDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMSHLPSARSWL 384
A DG+++ +GG + + E Y + +W + +
Sbjct: 121 GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLT 172
Score = 64.5 bits (155), Expect = 6e-12
Identities = 22/132 (16%), Positives = 44/132 (33%), Gaps = 13/132 (9%)
Query: 270 PKVNQWQDLAPMLIPRSGAAICALDSCIYVLGGWHASTENTNR-----VECYHIAENTWE 324
P + +W + I + AAI + + + + + +
Sbjct: 6 PGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVS 65
Query: 325 YKSPMKEKRYR--PGIAVI-DGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMSHLPSAR 381
++ K PGI++ +G+I V GG + YD +DSW + AR
Sbjct: 66 DRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA-----KKTSLYDSSSDSWIPGPDMQVAR 120
Query: 382 SWLGCVPLQIHK 393
+ + +
Sbjct: 121 GYQSSATMSDGR 132
Score = 56.7 bits (135), Expect = 2e-09
Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 9/86 (10%)
Query: 194 IAMLDGFVYAVGG------WDGSCRLDSVERYDPTKNEWSYIEPMKLAVT--SPAVVAHE 245
+ + DG + GG ++ S + + E Y P ++ + P + S +++ +
Sbjct: 295 VVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPD 354
Query: 246 GMLYVTGGAILEDGDGIEQ-VQRYNP 270
G ++ GG + D Q + P
Sbjct: 355 GRVFNGGGGLCGDCTTNHFDAQIFTP 380
Score = 33.3 bits (74), Expect = 0.048
Identities = 12/119 (10%), Positives = 26/119 (21%), Gaps = 49/119 (41%)
Query: 112 IIAVGGE------DDKVVLRSVEGFCVKTKVWKTLSCLPFAISKHGLVVSGRNTIYCLDI 165
GG+ +D + + E + + + + H
Sbjct: 302 TFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHS-------------- 347
Query: 166 VDIVYVAASMHKILHSLGSLKFDFDVSGIAMLDGFVYAVGG---WDGSCRLDSVERYDP 221
+ + DG V+ GG D + + + P
Sbjct: 348 --------------------------ISLLLPDGRVFNGGGGLCGDCTTNHFDAQIFTP 380
>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF)
protein BTB domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 121
Score = 62.4 bits (151), Expect = 1e-12
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 4 VLTGFNEARKNNEFCDVTLCVDGSKFPAHRVVLAASSPYFK-----VLETIRLPQLSPYF 58
+L N+ R CDV + VD +F AHR VLA +S F+ + L LSP
Sbjct: 15 LLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRNSQHYTLDFLSPKT 74
Query: 59 LHDCVE--QCAIIKNNPQCAQ-LVEEAKLFHL 87
+E A ++ + L+ A++ +
Sbjct: 75 FQQILEYAYTATLQAKAEDLDDLLYAAEILEI 106
>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 122
Score = 57.8 bits (139), Expect = 3e-11
Identities = 18/97 (18%), Positives = 33/97 (34%), Gaps = 13/97 (13%)
Query: 4 VLTGFNEARKNNEFCDVTLCVDGSKFPAHRVVLAASSPYFK----------VLETIRLPQ 53
VL N R + DV + V +F AH+ VL A S F + P+
Sbjct: 12 VLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPE 71
Query: 54 LSPYFLHDCVE---QCAIIKNNPQCAQLVEEAKLFHL 87
++P + ++ + ++ A +
Sbjct: 72 INPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQM 108
>d1p49a_ c.76.1.2 (A:) Steryl-sulfatase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 553
Score = 27.9 bits (60), Expect = 2.6
Identities = 10/57 (17%), Positives = 21/57 (36%)
Query: 316 YHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWE 372
+H +T +K+ + P + +V + +HD +D+ D E
Sbjct: 433 WHPQNSTSIWKAFFFTPNFNPVGSNGCFATHVCFCFGSYVTHHDPPLLFDISKDPRE 489
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 27.1 bits (58), Expect = 3.9
Identities = 26/210 (12%), Positives = 50/210 (23%), Gaps = 14/210 (6%)
Query: 198 DGFVYAVGGWDGSCRLDSVERYDPTKNEWSYIEPMK---LAVTSPAVVAHEGMLYVTGG- 253
D A+ + + Y+ + N+W + +K VT A + VT G
Sbjct: 18 DRTQIAICPNNHEVHI-----YEKSGNKWVQVHELKEHNGQVTGVD-WAPDSNRIVTCGT 71
Query: 254 ---AILEDGDGIEQVQRYNPKVNQWQDLAPMLIPRSGAAICALDSCIYVLGGWHASTENT 310
A + G P S + + + +
Sbjct: 72 DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW 131
Query: 311 NRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDS 370
+T + D K + + +
Sbjct: 132 VCKHIKKPIRSTVLSLDWHPNSVLLAAGSC-DFKCRIFSAYIKEVEERPAPTPWGSKMPF 190
Query: 371 WEIMSHLPSARSWLGCVPLQIHKSQFVDKS 400
E+M S+ W+ V + S+ S
Sbjct: 191 GELMFESSSSCGWVHGVCFSANGSRVAWVS 220
>d1rjuv_ g.46.1.1 (V:) Metallothionein {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 36
Score = 24.3 bits (52), Expect = 4.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 60 HDCVEQCAIIKNNPQCAQ 77
H+C QC KNN QC +
Sbjct: 1 HECQCQCGSCKNNEQCQK 18
>d1gena_ b.66.1.1 (A:) Gelatinase A (MMP-2), C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 200
Score = 26.2 bits (57), Expect = 6.3
Identities = 26/223 (11%), Positives = 55/223 (24%), Gaps = 52/223 (23%)
Query: 183 GSLKFDFDVSGIAMLDGFVYAVGGWDGSCRLDSVERYDPTKNEWSYIEPMKLAVTSPAVV 242
+ FD GIA + G ++ + R +++ +
Sbjct: 11 QDIVFD----GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPEK 59
Query: 243 AHEGMLYVTGGAILEDGDGIEQVQRYNPKVNQWQDLAPML---IPRSGAAICAL-----D 294
+ + Y+ + P+ +P + A +
Sbjct: 60 IDAVYEAPQEEKAVFFAG--NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKN 117
Query: 295 SCIYVLGG--WHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGI-----AVI----DG 343
Y+ G + E +++ + + I AV+ G
Sbjct: 118 KKTYIFAGDKFWRYNEVKKKMD--------PGFPKLIA--DAWNAIPDNLDAVVDLQGGG 167
Query: 344 KIYVLGGEEGWDGYHDSIECYDVDNDSWEIMSHLPSARSWLGC 386
Y G ++N S + + WLGC
Sbjct: 168 HSYFFKGAY----------YLKLENQSLKSVKFGSIKSDWLGC 200
>d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas)
[TaxId: 4120]}
Length = 498
Score = 25.9 bits (57), Expect = 9.7
Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 7/57 (12%)
Query: 146 AISKHGLVVSGRNTIYCLDIVDIVYVAASMHKILHSLGSLKFDFDVSGIAMLDGFVY 202
+ K + V+G N + D A + +++L L + + + G Y
Sbjct: 371 SGWKEYIDVAGENALPRYD-------ATAYNQMLLKLRPNGVNLNGPPKLKMSGLTY 420
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.137 0.434
Gapped
Lambda K H
0.267 0.0484 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,577,625
Number of extensions: 75159
Number of successful extensions: 228
Number of sequences better than 10.0: 1
Number of HSP's gapped: 201
Number of HSP's successfully gapped: 27
Length of query: 400
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 313
Effective length of database: 1,213,086
Effective search space: 379695918
Effective search space used: 379695918
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.2 bits)