BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2980
(92 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3VNG|A Chain A, Crystal Structure Of Keap1 In Complex With Synthetic Small
Molecular Based On A Co-crystallization
pdb|3VNH|A Chain A, Crystal Structure Of Keap1 Soaked With Synthetic Small
Molecular
Length = 309
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 4 GWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSI 63
G + + N VE Y + TW + +PMK +R GI V G+IYVLGG +G + DS+
Sbjct: 223 GGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHT-FLDSV 281
Query: 64 ECYDVDNDSWEIMSHLPSARSWLG 87
ECYD D D+W ++ + S RS +G
Sbjct: 282 ECYDPDTDTWSEVTRMTSGRSGVG 305
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 11 NTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDN 70
+++ ++CY+ N W +PM R R G+ VIDG IY +GG G +H+S+E Y+ +
Sbjct: 89 DSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCI-HHNSVERYEPER 147
Query: 71 DSWEIMSHLPSARSWLGCVPLQ 92
D W +++ + + R +G L
Sbjct: 148 DEWHLVAPMLTRRIGVGVAVLN 169
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 13 NRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDS 72
N VE Y + W +PM +R G+AV++ +Y +GG +G + +S ECY + +
Sbjct: 138 NSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRL-NSAECYYPERNE 196
Query: 73 WEIMSHLPSARSWLGCVPLQ 92
W +++ + + RS G L
Sbjct: 197 WRMITAMNTIRSGAGVCVLH 216
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 10 ENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGW-DGYHDS--IECY 66
++ + +E Y+ ++ TW + ++ R V+ G +Y +GG DG DS ++CY
Sbjct: 37 QSLSYLEAYNPSDGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCY 96
Query: 67 DVDNDSWEIMSHLPSARSWLG 87
+ + W + + R+ +G
Sbjct: 97 NPMTNQWSPCAPMSVPRNRIG 117
>pdb|1U6D|X Chain X, Crystal Structure Of The Kelch Domain Of Human Keap1
pdb|2FLU|X Chain X, Crystal Structure Of The Kelch-Neh2 Complex
Length = 308
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 4 GWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSI 63
G + + N VE Y + TW + +PMK +R GI V G+IYVLGG +G + DS+
Sbjct: 222 GGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHT-FLDSV 280
Query: 64 ECYDVDNDSWEIMSHLPSARSWLG 87
ECYD D D+W ++ + S RS +G
Sbjct: 281 ECYDPDTDTWSEVTRMTSGRSGVG 304
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 11 NTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDN 70
+++ ++CY+ N W +PM R R G+ VIDG IY +GG G +H+S+E Y+ +
Sbjct: 88 DSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCI-HHNSVERYEPER 146
Query: 71 DSWEIMSHLPSARSWLGCVPLQ 92
D W +++ + + R +G L
Sbjct: 147 DEWHLVAPMLTRRIGVGVAVLN 168
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 13 NRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDS 72
N VE Y + W +PM +R G+AV++ +Y +GG +G + +S ECY + +
Sbjct: 137 NSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRL-NSAECYYPERNE 195
Query: 73 WEIMSHLPSARSWLGCVPLQ 92
W +++ + + RS G L
Sbjct: 196 WRMITAMNTIRSGAGVCVLH 215
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 10 ENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGW-DGYHDS--IECY 66
++ + +E Y+ ++ TW + ++ R V+ G +Y +GG DG DS ++CY
Sbjct: 36 QSLSYLEAYNPSDGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCY 95
Query: 67 DVDNDSWEIMSHLPSARSWLG 87
+ + W + + R+ +G
Sbjct: 96 NPMTNQWSPCAPMSVPRNRIG 116
>pdb|2DYH|A Chain A, Crystal Structure Of The Keap1 Protein In Complexed With
The N-Terminal Region Of The Nrf2 Transcription Factor
pdb|2Z32|A Chain A, Crystal Structure Of Keap1 Complexed With Prothymosin
Alpha
pdb|3ADE|A Chain A, Crystal Structure Of Keap1 In Complex With Sequestosome-
1P62
Length = 318
Score = 69.3 bits (168), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 4 GWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSI 63
G + + N VE Y + TW + +PM+ R GI V GKIYVLGG +G + DS+
Sbjct: 216 GGYDGQDQLNSVERYDVETETWTFVAPMRHHRSALGITVHQGKIYVLGGYDGHT-FLDSV 274
Query: 64 ECYDVDNDSWEIMSHLPSARSWLG 87
ECYD D+D+W ++ + S RS +G
Sbjct: 275 ECYDPDSDTWSEVTRMTSGRSGVG 298
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 4 GWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSI 63
G T N ECY+ N W +PM R G+ V+ IY GG +G D +S+
Sbjct: 169 GGFDGTNRLNSAECYYPERNEWRMITPMNTIRSGAGVCVLHNCIYAAGGYDGQDQL-NSV 227
Query: 64 ECYDVDNDSWEIMSHLPSARSWLG 87
E YDV+ ++W ++ + RS LG
Sbjct: 228 ERYDVETETWTFVAPMRHHRSALG 251
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 11 NTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDN 70
+++ ++CY+ N W + M R R G+ VIDG IY +GG G +H S+E Y+ +
Sbjct: 82 DSSALDCYNPMTNQWSPCASMSVPRNRIGVGVIDGHIYAVGGSHGCI-HHSSVERYEPER 140
Query: 71 DSWEIMSHLPSARSWLGCVPLQ 92
D W +++ + + R +G L
Sbjct: 141 DEWHLVAPMLTRRIGVGVAVLN 162
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 15 VECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWE 74
VE Y + W +PM +R G+AV++ +Y +GG +G + +S ECY + + W
Sbjct: 133 VERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRL-NSAECYYPERNEWR 191
Query: 75 IMSHLPSARSWLGCVPLQ 92
+++ + + RS G L
Sbjct: 192 MITPMNTIRSGAGVCVLH 209
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 10 ENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGW-DGYHDS--IECY 66
++ + +E Y+ + +W + ++ R V+ G +Y +GG DG DS ++CY
Sbjct: 30 QSLSYLEAYNPSNGSWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCY 89
Query: 67 DVDNDSWEIMSHLPSARSWLG 87
+ + W + + R+ +G
Sbjct: 90 NPMTNQWSPCASMSVPRNRIG 110
>pdb|1X2J|A Chain A, Structural Basis For The Defects Of Human Lung Cancer
Somatic Mutations In The Repression Activity Of Keap1 On
Nrf2
pdb|1X2R|A Chain A, Structural Basis For The Defects Of Human Lung Cancer
Somatic Mutations In The Repression Activity Of Keap1 On
Nrf2
Length = 316
Score = 69.3 bits (168), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 4 GWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSI 63
G + + N VE Y + TW + +PM+ R GI V GKIYVLGG +G + DS+
Sbjct: 215 GGYDGQDQLNSVERYDVETETWTFVAPMRHHRSALGITVHQGKIYVLGGYDGHT-FLDSV 273
Query: 64 ECYDVDNDSWEIMSHLPSARSWLG 87
ECYD D+D+W ++ + S RS +G
Sbjct: 274 ECYDPDSDTWSEVTRMTSGRSGVG 297
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 4 GWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSI 63
G T N ECY+ N W +PM R G+ V+ IY GG +G D +S+
Sbjct: 168 GGFDGTNRLNSAECYYPERNEWRMITPMNTIRSGAGVCVLHNCIYAAGGYDGQDQL-NSV 226
Query: 64 ECYDVDNDSWEIMSHLPSARSWLG 87
E YDV+ ++W ++ + RS LG
Sbjct: 227 ERYDVETETWTFVAPMRHHRSALG 250
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 11 NTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDN 70
+++ ++CY+ N W + M R R G+ VIDG IY +GG G +H S+E Y+ +
Sbjct: 81 DSSALDCYNPMTNQWSPCASMSVPRNRIGVGVIDGHIYAVGGSHGCI-HHSSVERYEPER 139
Query: 71 DSWEIMSHLPSARSWLGCVPLQ 92
D W +++ + + R +G L
Sbjct: 140 DEWHLVAPMLTRRIGVGVAVLN 161
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 15 VECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWE 74
VE Y + W +PM +R G+AV++ +Y +GG +G + +S ECY + + W
Sbjct: 132 VERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRL-NSAECYYPERNEWR 190
Query: 75 IMSHLPSARSWLGCVPLQ 92
+++ + + RS G L
Sbjct: 191 MITPMNTIRSGAGVCVLH 208
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 15 VECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGW-DGYHDS--IECYDVDND 71
+E Y+ + +W + ++ R V+ G +Y +GG DG DS ++CY+ +
Sbjct: 34 LEAYNPSNGSWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 93
Query: 72 SWEIMSHLPSARSWLG 87
W + + R+ +G
Sbjct: 94 QWSPCASMSVPRNRIG 109
>pdb|1ZGK|A Chain A, 1.35 Angstrom Structure Of The Kelch Domain Of Keap1
Length = 308
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 4 GWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSI 63
G + + N VE Y + TW + +P K +R GI V G+IYVLGG +G + DS+
Sbjct: 222 GGYDGQDQLNSVERYDVETETWTFVAPXKHRRSALGITVHQGRIYVLGGYDGHT-FLDSV 280
Query: 64 ECYDVDNDSWEIMSHLPSARSWLG 87
ECYD D D+W ++ S RS +G
Sbjct: 281 ECYDPDTDTWSEVTRXTSGRSGVG 304
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 11 NTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDN 70
+++ ++CY+ N W +P R R G+ VIDG IY +GG G +H+S+E Y+ +
Sbjct: 88 DSSALDCYNPXTNQWSPCAPXSVPRNRIGVGVIDGHIYAVGGSHGCI-HHNSVERYEPER 146
Query: 71 DSWEIMSHLPSARSWLGCVPLQ 92
D W +++ + R +G L
Sbjct: 147 DEWHLVAPXLTRRIGVGVAVLN 168
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 13 NRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDS 72
N VE Y + W +P +R G+AV++ +Y +GG +G + +S ECY + +
Sbjct: 137 NSVERYEPERDEWHLVAPXLTRRIGVGVAVLNRLLYAVGGFDGTNRL-NSAECYYPERNE 195
Query: 73 WEIMSHLPSARSWLGCVPLQ 92
W ++ + RS G L
Sbjct: 196 WRXITAXNTIRSGAGVCVLH 215
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 15 VECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGW-DGYHDS--IECYDVDND 71
+E Y+ + TW + ++ R V+ G +Y +GG DG DS ++CY+ +
Sbjct: 41 LEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPXTN 100
Query: 72 SWEIMSHLPSARSWLG 87
W + R+ +G
Sbjct: 101 QWSPCAPXSVPRNRIG 116
>pdb|2WOZ|A Chain A, The Novel Beta-Propeller Of The Btb-Kelch Protein Krp1
Provides The Binding Site For Lasp-1 That Is Necessary
For Pseudopodia Extension
Length = 318
Score = 57.8 bits (138), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 12 TNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDND 71
TNRV Y+ + W+ +PMK R G+A+ GKI + GG DG S+E +D+ +
Sbjct: 174 TNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTE-DGLSASVEAFDLKTN 232
Query: 72 SWEIMSHLPSARSWLGCVPL 91
WE+M+ P RS + V L
Sbjct: 233 KWEVMTEFPQERSSISLVSL 252
Score = 32.3 bits (72), Expect = 0.066, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 25 WEYKSPMKEKRYRPGIAVIDGKIYVLGGEE-GWDGYHDSIECYDVDNDSWEIMSHLP 80
W P+ R G+ +D KIYV+ G++ + DS+ CYD W + +LP
Sbjct: 90 WVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLP 146
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 15 VECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGG 52
VE + + N WE + ++R + + G +Y +GG
Sbjct: 224 VEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGG 261
>pdb|2VPJ|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl12
Length = 301
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 13 NRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDS 72
N VE Y W +PM KR G+A+++ IYV+GG +G + S+E Y++ DS
Sbjct: 175 NSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDG-TAHLSSVEAYNIRTDS 233
Query: 73 WEIMSHLPSARSWLGCVPLQ 92
W ++ + + R ++G L+
Sbjct: 234 WTTVTSMTTPRCYVGATVLR 253
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 4 GWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSI 63
G T + + VE Y+I ++W + M R G V+ G++Y + G +G + SI
Sbjct: 213 GGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDG-NSLLSSI 271
Query: 64 ECYDVDNDSWEIMSHLPSARSWLGCVPLQ 92
ECYD DSWE+++ + + R G L+
Sbjct: 272 ECYDPIIDSWEVVTSMGTQRCDAGVCVLR 300
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 15 VECYHIA---ENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDND 71
VEC + W +PM +R G + IYV GG +G H S+E YD + D
Sbjct: 80 VECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDG-SRRHTSMERYDPNID 138
Query: 72 SWEIMSHLPSARSWLGCV 89
W ++ + +AR G V
Sbjct: 139 QWSMLGDMQTAREGAGLV 156
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 4 GWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSI 63
G+ S +T+ +E Y + W M+ R G+ V G IY LGG +G + +S+
Sbjct: 120 GFDGSRRHTS-MERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLN-ILNSV 177
Query: 64 ECYDVDNDSWEIMSHLPSARSWLGCVPLQ 92
E YD W ++ + + RS G L
Sbjct: 178 EKYDPHTGHWTNVTPMATKRSGAGVALLN 206
Score = 28.9 bits (63), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 1 MLRGWHASTENTNRVECYHIAENTWEY-KSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGY 59
++ G+ + + VE Y W + S +++RY +++ D +IYV+GG +G
Sbjct: 19 VVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHD-RIYVIGGYDGRSRL 77
Query: 60 HDSIECYDVDNDS---WEIMSHLPSARSWLGCVPL 91
S+EC D D W ++ + R G L
Sbjct: 78 -SSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL 111
>pdb|3II7|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl7
Length = 306
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 4 GWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSI 63
G + S N E Y A TW PM E R G+ + KI+ +GG+ G G D++
Sbjct: 160 GNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGL-DNV 218
Query: 64 ECYDVDNDSWEIMSHLP 80
E YD+ + W+++S +P
Sbjct: 219 EYYDIKLNEWKMVSPMP 235
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 14 RVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSW 73
R++CY++ +++W K R +GKIY GG E + ECYD +SW
Sbjct: 71 RMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESW 130
Query: 74 EIMSHLPSARSWLGCV 89
+ + R G V
Sbjct: 131 HTKPSMLTQRCSHGMV 146
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 16 ECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWD---GYHDSIECYDVDNDS 72
ECY +W K M +R G+ +G IYV GG G + +S E YD ++
Sbjct: 121 ECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET 180
Query: 73 WEIMSHLPSARSWLGCVPLQ 92
W + + AR G V ++
Sbjct: 181 WTELCPMIEARKNHGLVFVK 200
Score = 32.3 bits (72), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 13 NRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDS 72
+ VE Y I N W+ SPM K A + +YVL G +G +E Y+ + D
Sbjct: 216 DNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILE-YNTETDK 274
Query: 73 WEIMSHLPS--ARSWLGCV 89
W S + + S L CV
Sbjct: 275 WVANSKVRAFPVTSCLICV 293
>pdb|2XN4|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl2
(mayven)
pdb|2XN4|B Chain B, Crystal Structure Of The Kelch Domain Of Human Klhl2
(mayven)
Length = 302
Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 7 ASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECY 66
AS + + VECY+ N W Y + M +R G+ V++ +Y +GG +G S+E Y
Sbjct: 167 ASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDG-PLVRKSVEVY 225
Query: 67 DVDNDSWEIMSHLPSAR 83
D ++W ++ + R
Sbjct: 226 DPTTNAWRQVADMNMCR 242
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 15 VECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWE 74
VE Y N W + M R G+ ++G +YV+GG++G S+E Y+ D W
Sbjct: 222 VEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLA-SVEYYNPTTDKWT 280
Query: 75 IMSH-LPSARSWLG 87
++S + + RS+ G
Sbjct: 281 VVSSCMSTGRSYAG 294
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 15 VECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWE 74
VECY E W + + +R R G+ + G ++ +GG G +++ YD D W
Sbjct: 32 VECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVR-TVDSYDPVKDQWT 90
Query: 75 IMSHLPSARSWLGCVPL 91
++++ RS LG L
Sbjct: 91 SVANMRDRRSTLGAAVL 107
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 15 VECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWE 74
V+ Y ++ W + M+++R G AV++G +Y +GG +G G S+E Y++ ++ W
Sbjct: 79 VDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGL-SSVEAYNIKSNEWF 137
Query: 75 IMSHLPSARS 84
++ + + RS
Sbjct: 138 HVAPMNTRRS 147
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 4 GWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEE-GWDGYHDS 62
G+ ST + VE Y+I N W + +PM +R G+ V+ G +Y +GG + +
Sbjct: 116 GFDGST-GLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLST 174
Query: 63 IECYDVDNDSWEIMSHLPSARSWLG 87
+ECY+ + W ++ + + RS G
Sbjct: 175 VECYNATTNEWTYIAEMSTRRSGAG 199
Score = 29.6 bits (65), Expect = 0.40, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 62 SIECYDVDNDSWEIMSHLPSARSWLGCV 89
S+ECYD + W ++ LPS R G V
Sbjct: 31 SVECYDFKEERWHQVAELPSRRCRAGMV 58
>pdb|4ASC|A Chain A, Crystal Structure Of The Kelch Domain Of Human Kbtbd5
Length = 315
Score = 37.0 bits (84), Expect = 0.002, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 13 NRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDS 72
N++ Y + W+ +PM+ R G V DG+I V G G S E Y + ++
Sbjct: 165 NKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTD-TGLTSSAEVYSITDNK 223
Query: 73 WEIMSHLPSARSWLGCVPL 91
W P RS L V L
Sbjct: 224 WAPFEAFPQERSSLSLVSL 242
Score = 30.0 bits (66), Expect = 0.30, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 22 ENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYH--DSIECYDVDNDSWEIMSHL 79
++ W P+ R G+ IYV+GG E DG DS+ CYD + W L
Sbjct: 76 DSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPL 135
Query: 80 P 80
P
Sbjct: 136 P 136
Score = 25.8 bits (55), Expect = 6.5, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 12 TNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGG 52
T+ E Y I +N W ++R + + G +Y +GG
Sbjct: 211 TSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVGTLYAIGG 251
>pdb|2W61|A Chain A, Saccharomyces Cerevisiae Gas2p Apostructure (E176q Mutant)
Length = 555
Score = 28.1 bits (61), Expect = 1.5, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Query: 15 VECYHIAENTWEYKSPMKEKRYRPGIAVIDG----KIYVLGGEEGWDGYHDSIECYDVD 69
VEC HIA WE + E R A +D +I G E G + S C VD
Sbjct: 365 VECPHIAVGVWEANEKLPETPDRSKCACLDEILPCEIVPFGAESGKYEEYFSYLCSKVD 423
>pdb|2W62|A Chain A, Saccharomyces Cerevisiae Gas2p In Complex With
Laminaripentaose
pdb|2W63|A Chain A, Saccharomyces Cerevisiae Gas2p In Complex With
Laminaritriose And Laminaritetraose
Length = 555
Score = 27.7 bits (60), Expect = 1.5, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Query: 15 VECYHIAENTWEYKSPMKEKRYRPGIAVIDG----KIYVLGGEEGWDGYHDSIECYDVD 69
VEC HIA WE + E R A +D +I G E G + S C VD
Sbjct: 365 VECPHIAVGVWEANEKLPETPDRSKCACLDEILPCEIVPFGAESGKYEEYFSYLCSKVD 423
>pdb|2UVK|A Chain A, Structure Of Yjht
pdb|2UVK|B Chain B, Structure Of Yjht
Length = 357
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 41 AVIDGKIYVLGG----EEGWDGYHDSIECYDVDNDSW-EIMSHLP 80
A IDG +YV GG EG + + Y+ +SW ++ SH P
Sbjct: 62 AFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLXSHAP 106
>pdb|2EIB|A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant
Length = 639
Score = 27.7 bits (60), Expect = 1.9, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 11 NTNRVECYHIAENTWEYKSPMKEKR-YRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVD 69
+ + Y + ++W M+ R Y+ + DG+++ +GG + + E Y
Sbjct: 246 DAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSHSGGVFEKNGEVYSPS 305
Query: 70 NDSWEIMSHLPSAR 83
+ +W + LP+A+
Sbjct: 306 SKTW---TSLPNAK 316
>pdb|1K3I|A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase
Length = 656
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 11 NTNRVECYHIAENTWEYKSPMKEKR-YRPGIAVIDGKIYVLGGEEGWDG--YHDSIECYD 67
+ + Y + ++W M+ R Y+ + DG+++ +GG W G + + E Y
Sbjct: 263 DAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGS--WSGGVFEKNGEVYS 320
Query: 68 VDNDSWEIMSHLPSAR 83
+ +W + LP+A+
Sbjct: 321 PSSKTW---TSLPNAK 333
>pdb|2EID|A Chain A, Galactose Oxidase W290g Mutant
Length = 639
Score = 26.9 bits (58), Expect = 3.3, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 11 NTNRVECYHIAENTWEYKSPMKEKR-YRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVD 69
+ + Y + ++W M+ R Y+ + DG+++ +GG + + E Y
Sbjct: 246 DAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSGSGGVFEKNGEVYSPS 305
Query: 70 NDSWEIMSHLPSAR 83
+ +W + LP+A+
Sbjct: 306 SKTW---TSLPNAK 316
>pdb|1T2X|A Chain A, Glactose Oxidase C383s Mutant Identified By Directed
Evolution
Length = 639
Score = 26.6 bits (57), Expect = 3.6, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 11 NTNRVECYHIAENTWEYKSPMKEKR-YRPGIAVIDGKIYVLGGEEGWDG--YHDSIECYD 67
+ + Y + ++W M+ R Y+ + DG+++ +GG W G + + E Y
Sbjct: 246 DAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGS--WSGGVFEKNGEVYS 303
Query: 68 VDNDSWEIMSHLPSAR 83
+ +W + LP+A+
Sbjct: 304 PSSKTW---TSLPNAK 316
>pdb|2EIE|A Chain A, Crystal Structure Of Galactose Oxidase Complexed With
Azide
pdb|1GOF|A Chain A, Novel Thioether Bond Revealed By A 1.7 Angstroms Crystal
Structure Of Galactose Oxidase
pdb|1GOG|A Chain A, Novel Thioether Bond Revealed By A 1.7 Angstroms Crystal
Structure Of Galactose Oxidase
pdb|1GOH|A Chain A, Novel Thioether Bond Revealed By A 1.7 Angstroms Crystal
Structure Of Galactose Oxidase
pdb|2JKX|A Chain A, Galactose Oxidase. Matgo. Copper Free, Expressed In Pichia
Pastoris.
pdb|2VZ1|A Chain A, Premat-Galactose Oxidase
pdb|2VZ3|A Chain A, Bleached Galactose Oxidase
Length = 639
Score = 26.6 bits (57), Expect = 3.6, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 11 NTNRVECYHIAENTWEYKSPMKEKR-YRPGIAVIDGKIYVLGGEEGWDG--YHDSIECYD 67
+ + Y + ++W M+ R Y+ + DG+++ +GG W G + + E Y
Sbjct: 246 DAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGS--WSGGVFEKNGEVYS 303
Query: 68 VDNDSWEIMSHLPSAR 83
+ +W + LP+A+
Sbjct: 304 PSSKTW---TSLPNAK 316
>pdb|2WQ8|A Chain A, Glycan Labelling Using Engineered Variants Of Galactose
Oxidase Obtained By Directed Evolution
Length = 661
Score = 26.6 bits (57), Expect = 4.3, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 11 NTNRVECYHIAENTWEYKSPMKEKR-YRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVD 69
+ + Y + ++W M+ R Y+ + DG+++ +GG + + E Y
Sbjct: 268 DAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSFSGGVFEKNGEVYSPS 327
Query: 70 NDSWEIMSHLPSAR 83
+ +W + LP+A+
Sbjct: 328 SKTW---TSLPNAK 338
>pdb|2EIC|A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f
Length = 639
Score = 26.6 bits (57), Expect = 4.3, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 11 NTNRVECYHIAENTWEYKSPMKEKR-YRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVD 69
+ + Y + ++W M+ R Y+ + DG+++ +GG + + E Y
Sbjct: 246 DAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSFSGGVFEKNGEVYSPS 305
Query: 70 NDSWEIMSHLPSAR 83
+ +W + LP+A+
Sbjct: 306 SKTW---TSLPNAK 316
>pdb|3P71|C Chain C, Crystal Structure Of The Complex Of Lcmt-1 And Pp2a
Length = 304
Score = 25.4 bits (54), Expect = 7.9, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 1 MLRGWHASTENTNRVECY------HIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEE 54
+LRG H S + T Y + N W+Y + + + Y P A++DG+I+ L G
Sbjct: 113 ILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFD--YLPLTALVDGQIFCLHG-- 168
Query: 55 GWDGYHDSIECYD 67
G SI+ D
Sbjct: 169 ---GLSPSIDTLD 178
>pdb|3FGA|C Chain C, Structural Basis Of Pp2a And Sgo Interaction
Length = 309
Score = 25.4 bits (54), Expect = 8.0, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 1 MLRGWHASTENTNRVECY------HIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEE 54
+LRG H S + T Y + N W+Y + + + Y P A++DG+I+ L G
Sbjct: 113 ILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFD--YLPLTALVDGQIFCLHG-- 168
Query: 55 GWDGYHDSIECYD 67
G SI+ D
Sbjct: 169 ---GLSPSIDTLD 178
>pdb|2IE4|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound
To Okadaic Acid
pdb|2NPP|C Chain C, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|2NPP|F Chain F, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|3DW8|C Chain C, Structure Of A Protein Phosphatase 2a Holoenzyme With B55
Subunit
pdb|3DW8|F Chain F, Structure Of A Protein Phosphatase 2a Holoenzyme With B55
Subunit
pdb|3K7V|C Chain C, Protein Phosphatase 2a Core Complex Bound To
Dinophysistoxin-1
pdb|3K7W|C Chain C, Protein Phosphatase 2a Core Complex Bound To
Dinophysistoxin-2
Length = 309
Score = 25.4 bits (54), Expect = 8.1, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 1 MLRGWHASTENTNRVECY------HIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEE 54
+LRG H S + T Y + N W+Y + + + Y P A++DG+I+ L G
Sbjct: 113 ILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFD--YLPLTALVDGQIFCLHG-- 168
Query: 55 GWDGYHDSIECYD 67
G SI+ D
Sbjct: 169 ---GLSPSIDTLD 178
>pdb|2IE3|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound
To Tumor- Inducing Toxins
Length = 309
Score = 25.4 bits (54), Expect = 8.1, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 1 MLRGWHASTENTNRVECY------HIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEE 54
+LRG H S + T Y + N W+Y + + + Y P A++DG+I+ L G
Sbjct: 113 ILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFD--YLPLTALVDGQIFCLHG-- 168
Query: 55 GWDGYHDSIECYD 67
G SI+ D
Sbjct: 169 ---GLSPSIDTLD 178
>pdb|3C5W|C Chain C, Complex Between Pp2a-Specific Methylesterase Pme-1 And
Pp2a Core Enzyme
Length = 310
Score = 25.4 bits (54), Expect = 8.1, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 1 MLRGWHASTENTNRVECY------HIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEE 54
+LRG H S + T Y + N W+Y + + + Y P A++DG+I+ L G
Sbjct: 114 ILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFD--YLPLTALVDGQIFCLHG-- 169
Query: 55 GWDGYHDSIECYD 67
G SI+ D
Sbjct: 170 ---GLSPSIDTLD 179
>pdb|2NYL|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYL|F Chain F, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYM|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
pdb|2NYM|F Chain F, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
Length = 293
Score = 25.4 bits (54), Expect = 8.1, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 1 MLRGWHASTENTNRVECY------HIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEE 54
+LRG H S + T Y + N W+Y + + + Y P A++DG+I+ L G
Sbjct: 112 ILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFD--YLPLTALVDGQIFCLHG-- 167
Query: 55 GWDGYHDSIECYD 67
G SI+ D
Sbjct: 168 ---GLSPSIDTLD 177
>pdb|2IAE|C Chain C, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme.
pdb|2IAE|F Chain F, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme
Length = 309
Score = 25.4 bits (54), Expect = 8.3, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 1 MLRGWHASTENTNRVECY------HIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEE 54
+LRG H S + T Y + N W+Y + + + Y P A++DG+I+ L G
Sbjct: 113 ILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFD--YLPLTALVDGQIFCLHG-- 168
Query: 55 GWDGYHDSIECYD 67
G SI+ D
Sbjct: 169 ---GLSPSIDTLD 178
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.465
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,416,968
Number of Sequences: 62578
Number of extensions: 138983
Number of successful extensions: 376
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 289
Number of HSP's gapped (non-prelim): 75
length of query: 92
length of database: 14,973,337
effective HSP length: 59
effective length of query: 33
effective length of database: 11,281,235
effective search space: 372280755
effective search space used: 372280755
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 45 (21.9 bits)