Query psy2980
Match_columns 92
No_of_seqs 115 out of 1475
Neff 10.9
Searched_HMMs 29240
Date Fri Aug 16 22:29:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2980.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2980hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 99.9 1.7E-21 5.8E-26 116.0 11.7 92 1-92 103-196 (315)
2 4asc_A Kelch repeat and BTB do 99.9 1.8E-21 6.3E-26 115.8 11.1 91 1-92 153-243 (315)
3 3ii7_A Kelch-like protein 7; p 99.9 6.4E-21 2.2E-25 113.0 11.6 90 1-92 60-149 (306)
4 2woz_A Kelch repeat and BTB do 99.9 3.3E-21 1.1E-25 114.9 10.3 92 1-92 114-206 (318)
5 2woz_A Kelch repeat and BTB do 99.9 3.4E-21 1.2E-25 114.8 10.2 91 1-92 163-253 (318)
6 3ii7_A Kelch-like protein 7; p 99.9 7.2E-21 2.5E-25 112.8 11.3 92 1-92 106-200 (306)
7 1zgk_A Kelch-like ECH-associat 99.9 6.6E-21 2.3E-25 113.2 11.1 89 1-91 220-308 (308)
8 2xn4_A Kelch-like protein 2; s 99.9 1.7E-20 6E-25 110.9 11.9 89 1-92 20-108 (302)
9 2xn4_A Kelch-like protein 2; s 99.9 1.7E-20 5.6E-25 111.0 11.5 90 1-92 209-299 (302)
10 1zgk_A Kelch-like ECH-associat 99.8 3.1E-20 1E-24 110.4 11.7 90 1-92 173-262 (308)
11 2vpj_A Kelch-like protein 12; 99.8 5.9E-20 2E-24 108.6 11.9 90 1-92 164-253 (301)
12 2vpj_A Kelch-like protein 12; 99.8 4.4E-20 1.5E-24 109.1 10.5 91 1-92 19-112 (301)
13 2zwa_A Leucine carboxyl methyl 99.8 3.6E-19 1.2E-23 115.5 10.6 89 1-91 402-498 (695)
14 2uvk_A YJHT; unknown function, 99.8 1.2E-18 4E-23 105.1 10.1 86 1-91 24-117 (357)
15 2uvk_A YJHT; unknown function, 99.8 4E-19 1.4E-23 107.1 7.9 91 1-91 70-199 (357)
16 2zwa_A Leucine carboxyl methyl 99.8 1.3E-18 4.4E-23 112.9 8.8 87 1-91 456-546 (695)
17 1k3i_A Galactose oxidase precu 99.6 1.3E-15 4.4E-20 98.2 7.4 79 1-84 258-342 (656)
18 1k3i_A Galactose oxidase precu 99.6 2.2E-15 7.5E-20 97.2 8.1 78 14-91 433-518 (656)
19 3mbr_X Glutamine cyclotransfer 94.2 0.42 1.4E-05 27.8 7.5 54 13-72 43-96 (243)
20 3nol_A Glutamine cyclotransfer 93.5 0.64 2.2E-05 27.4 7.2 54 13-72 65-118 (262)
21 3mbr_X Glutamine cyclotransfer 89.5 2 6.9E-05 25.0 7.5 50 37-90 23-72 (243)
22 2iwa_A Glutamine cyclotransfer 88.9 2.3 7.9E-05 25.0 7.0 55 12-72 43-97 (266)
23 3nol_A Glutamine cyclotransfer 86.3 3 0.0001 24.6 5.6 61 25-89 31-93 (262)
24 3nok_A Glutaminyl cyclase; bet 84.0 2.4 8.3E-05 25.1 4.5 51 15-72 77-127 (268)
25 3nok_A Glutaminyl cyclase; bet 83.7 5.1 0.00017 23.8 6.2 52 12-73 115-167 (268)
26 3hfq_A Uncharacterized protein 75.0 8.6 0.00029 22.5 5.0 59 14-76 19-78 (347)
27 3dsm_A Uncharacterized protein 73.4 12 0.0004 22.1 7.4 56 12-73 16-76 (328)
28 3bws_A Protein LP49; two-domai 65.4 20 0.00067 21.6 5.8 56 14-75 102-158 (433)
29 3dsm_A Uncharacterized protein 63.4 20 0.00069 21.1 8.3 52 13-73 203-256 (328)
30 3jrp_A Fusion protein of prote 62.1 21 0.00071 20.8 5.3 57 14-76 34-94 (379)
31 2iwa_A Glutamine cyclotransfer 59.7 24 0.00082 20.7 6.3 51 26-80 10-63 (266)
32 1ri6_A Putative isomerase YBHE 58.6 23 0.0008 20.2 6.9 65 13-81 253-321 (343)
33 3pe7_A Oligogalacturonate lyas 55.6 29 0.001 20.4 5.1 57 13-73 320-387 (388)
34 3syx_A Sprouty-related, EVH1 d 54.4 10 0.00035 20.0 2.2 18 13-30 18-35 (130)
35 3scy_A Hypothetical bacterial 53.4 32 0.0011 20.2 5.8 59 15-77 31-93 (361)
36 1k8k_C P40, ARP2/3 complex 41 53.2 31 0.0011 20.0 5.5 58 13-76 30-89 (372)
37 3kvp_A Uncharacterized protein 52.8 17 0.00058 16.9 2.7 16 14-29 41-56 (72)
38 2lyd_A Decapping protein 1; DC 52.2 13 0.00045 19.6 2.5 17 60-76 37-53 (134)
39 3q7m_A Lipoprotein YFGL, BAMB; 52.1 35 0.0012 20.2 8.5 57 13-76 63-130 (376)
40 3jro_A Fusion protein of prote 49.3 56 0.0019 21.9 5.6 58 13-76 31-92 (753)
41 3odt_A Protein DOA1; ubiquitin 47.1 26 0.00089 19.7 3.5 56 14-77 247-303 (313)
42 3dwl_C Actin-related protein 2 46.8 35 0.0012 20.0 4.1 53 14-72 34-88 (377)
43 4gga_A P55CDC, cell division c 46.1 47 0.0016 20.1 6.2 53 14-72 126-180 (420)
44 1qc6_A EVH1 domain from ENA/VA 45.9 22 0.00075 18.5 2.7 17 13-29 11-27 (130)
45 1flg_A Protein (quinoprotein e 44.9 63 0.0022 21.1 6.6 55 13-76 466-524 (582)
46 3dqy_A Toluene 1,2-dioxygenase 44.5 28 0.00096 17.0 4.1 34 16-50 66-99 (106)
47 1evh_A WH1 domain, protein (ME 43.2 25 0.00084 17.8 2.6 17 13-29 11-27 (112)
48 1q67_A Decapping protein invol 43.1 21 0.00072 20.6 2.5 18 59-76 42-59 (231)
49 4ggc_A P55CDC, cell division c 40.3 49 0.0017 18.6 6.4 53 14-72 46-100 (318)
50 3azo_A Aminopeptidase; POP fam 40.0 74 0.0025 20.5 5.8 62 13-79 217-283 (662)
51 2w8x_A ION-channel modulator r 39.8 27 0.00093 15.5 2.5 19 10-28 26-44 (72)
52 4a2l_A BT_4663, two-component 39.3 86 0.0029 21.1 6.4 56 14-77 428-487 (795)
53 2hz6_A Endoplasmic reticulum t 39.0 63 0.0022 19.4 4.8 53 13-75 19-75 (369)
54 1l0q_A Surface layer protein; 38.9 59 0.002 19.1 5.6 55 13-75 96-152 (391)
55 2cn3_A Xyloglucanase, beta-1,4 38.5 89 0.0031 21.1 8.3 58 24-81 233-294 (737)
56 3gce_A Ferredoxin component of 38.0 41 0.0014 17.0 4.5 36 16-52 77-112 (121)
57 2jo6_A Nitrite reductase [NAD( 37.3 40 0.0014 16.6 3.7 33 16-50 78-110 (113)
58 1ddw_A GLGF-domain protein hom 37.1 32 0.0011 17.7 2.5 18 60-77 10-28 (120)
59 3c0d_A Putative nitrite reduct 36.8 29 0.00098 17.4 2.3 35 16-52 76-110 (119)
60 2qpz_A Naphthalene 1,2-dioxyge 36.5 39 0.0013 16.3 4.1 33 16-49 68-100 (103)
61 2hqs_A Protein TOLB; TOLB, PAL 35.8 75 0.0026 19.4 6.8 58 14-77 204-263 (415)
62 3vgz_A Uncharacterized protein 35.4 64 0.0022 18.5 5.3 54 12-73 68-123 (353)
63 2w2a_A P-coumaric acid decarbo 34.7 64 0.0022 18.2 5.1 60 15-76 44-107 (194)
64 2qkl_A DCP1 protein, SPBC3B9.2 34.6 8.2 0.00028 20.2 -0.0 17 60-76 32-48 (127)
65 1xod_A Spred1; sprouty, EVH1, 34.5 30 0.001 17.7 2.1 17 13-29 11-27 (118)
66 1w6s_A Methanol dehydrogenase 34.1 1E+02 0.0035 20.4 6.7 54 13-75 453-510 (599)
67 2mad_H Methylamine dehydrogena 34.1 80 0.0027 19.2 6.2 54 12-73 297-353 (373)
68 2i7f_A Ferredoxin component of 33.8 45 0.0015 16.2 3.0 8 42-49 94-101 (108)
69 2de6_D Ferredoxin component of 33.2 49 0.0017 16.4 3.7 35 16-51 70-104 (115)
70 3nf5_A Nucleoporin NUP116; nuc 32.3 41 0.0014 18.5 2.5 16 13-28 136-151 (164)
71 1vm9_A Toluene-4-monooxygenase 32.2 49 0.0017 16.2 3.0 9 16-24 68-76 (111)
72 3u4y_A Uncharacterized protein 31.8 74 0.0025 18.1 5.5 53 13-73 20-74 (331)
73 2jza_A Nitrite reductase [NAD( 31.3 49 0.0017 16.9 2.6 34 16-51 75-108 (130)
74 1fqt_A Rieske-type ferredoxin 30.5 54 0.0018 16.1 4.6 34 16-50 71-104 (112)
75 1jmx_B Amine dehydrogenase; ox 29.8 82 0.0028 18.0 6.0 56 13-74 21-78 (349)
76 3c75_H MADH, methylamine dehyd 29.6 1.1E+02 0.0036 19.4 4.3 55 12-74 349-406 (426)
77 3kep_A Nucleoporin NUP145; nuc 29.3 49 0.0017 18.4 2.5 16 13-28 147-162 (174)
78 3zx7_A Lysenin; toxin, pore fo 29.3 8 0.00027 22.1 -0.6 50 24-75 243-292 (309)
79 3pbp_B Nucleoporin NUP116/NSP1 28.6 41 0.0014 18.1 2.1 17 12-28 124-140 (148)
80 4aay_B AROB; oxidoreductase, r 28.3 79 0.0027 17.3 3.9 35 16-51 126-162 (175)
81 1qhu_A Protein (hemopexin); be 28.0 1.2E+02 0.0042 19.5 8.2 50 13-71 167-216 (460)
82 3sjl_D Methylamine dehydrogena 27.6 1.2E+02 0.0039 19.0 6.3 56 12-75 310-368 (386)
83 2q5x_A Nuclear pore complex pr 27.4 56 0.0019 17.7 2.5 16 13-28 129-144 (155)
84 2b4w_A Hypothetical protein, c 26.7 1.1E+02 0.0039 18.6 4.8 40 13-53 58-98 (315)
85 3q7m_A Lipoprotein YFGL, BAMB; 25.9 1.1E+02 0.0037 18.1 8.9 53 14-75 288-344 (376)
86 1g8k_B Arsenite oxidase; molyb 24.4 82 0.0028 16.2 4.4 35 16-51 83-120 (133)
87 3ott_A Two-component system se 24.2 1.6E+02 0.0056 19.6 7.7 54 14-76 83-136 (758)
88 2ad6_A Methanol dehydrogenase 24.1 1.5E+02 0.0053 19.3 7.4 55 13-76 444-502 (571)
89 3ijm_A Uncharacterized restric 23.6 85 0.0029 16.8 2.6 18 12-29 110-127 (151)
90 3nff_A RNA polymerase I subuni 23.5 88 0.003 16.3 2.7 16 15-30 76-91 (122)
91 3nfg_A DNA-directed RNA polyme 23.2 77 0.0026 15.9 2.4 16 15-30 76-91 (102)
92 2jp2_A Spred-2, sprouty-relate 22.7 49 0.0017 17.2 1.7 18 13-30 20-37 (126)
93 2crf_A RAN binding protein 3; 22.5 79 0.0027 16.9 2.5 17 60-76 33-49 (150)
94 3e5z_A Putative gluconolactona 22.2 1.2E+02 0.004 17.2 5.8 55 13-76 50-105 (296)
95 2pm7_B Protein transport prote 22.0 1.2E+02 0.0041 17.2 4.9 25 45-75 67-91 (297)
96 2dg1_A DRP35, lactonase; beta 21.6 1.3E+02 0.0043 17.3 7.1 59 13-74 66-125 (333)
97 3n7c_A ABR034WP; nuclear pore 21.2 65 0.0022 16.8 1.9 17 60-76 17-33 (130)
98 3v9f_A Two-component system se 21.0 2E+02 0.0067 19.3 8.6 56 14-76 138-198 (781)
99 1gxr_A ESG1, transducin-like e 20.8 1.2E+02 0.0043 17.0 5.2 52 14-72 164-216 (337)
100 4fmw_A RNA (guanine-9-)-methyl 20.6 32 0.0011 19.4 0.7 11 44-54 119-129 (197)
101 3bg1_A Protein SEC13 homolog; 20.5 1.3E+02 0.0046 17.2 4.4 24 45-74 71-94 (316)
102 1kv9_A Type II quinohemoprotei 20.3 2E+02 0.0069 19.1 8.9 63 13-76 127-195 (668)
103 1rrp_B Nuclear pore complex pr 20.1 80 0.0027 16.4 2.2 17 60-76 28-44 (134)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.88 E-value=1.7e-21 Score=115.98 Aligned_cols=92 Identities=20% Similarity=0.365 Sum_probs=80.9
Q ss_pred CccccCC--CCCCcceEEEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCceEEcCC
Q psy2980 1 MLRGWHA--STENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMSH 78 (92)
Q Consensus 1 v~GG~~~--~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~~~ 78 (92)
|+||.+. .....+++++||+.+++|..++++|.+|..+++++++++||++||........+++++||+.+++|+.+++
T Consensus 103 v~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~ 182 (315)
T 4asc_A 103 VVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAP 182 (315)
T ss_dssp EECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCC
T ss_pred EEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCC
Confidence 5788652 24455679999999999999999999999999999999999999985546779999999999999999999
Q ss_pred CCCCccceeeEEcC
Q psy2980 79 LPSARSWLGCVPLQ 92 (92)
Q Consensus 79 ~~~~~~~~~~~~~~ 92 (92)
+|.+|..|++++++
T Consensus 183 ~p~~r~~~~~~~~~ 196 (315)
T 4asc_A 183 MQTARSLFGATVHD 196 (315)
T ss_dssp CSSCCBSCEEEEET
T ss_pred CCCchhceEEEEEC
Confidence 99999999988753
No 2
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.87 E-value=1.8e-21 Score=115.84 Aligned_cols=91 Identities=27% Similarity=0.475 Sum_probs=80.8
Q ss_pred CccccCCCCCCcceEEEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCceEEcCCCC
Q psy2980 1 MLRGWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMSHLP 80 (92)
Q Consensus 1 v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~~ 80 (92)
|+||.+......+++++||+.+++|..++++|.+|..+++++++++||++||.+. ....+++++||+.+++|+.++++|
T Consensus 153 v~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~p 231 (315)
T 4asc_A 153 VIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTD-TGLTSSAEVYSITDNKWAPFEAFP 231 (315)
T ss_dssp EECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECS-SSEEEEEEEEETTTTEEEEECCCS
T ss_pred EEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCC-CCccceEEEEECCCCeEEECCCCC
Confidence 5799854445566799999999999999999999999999999999999999876 456889999999999999999999
Q ss_pred CCccceeeEEcC
Q psy2980 81 SARSWLGCVPLQ 92 (92)
Q Consensus 81 ~~~~~~~~~~~~ 92 (92)
.+|..|++++++
T Consensus 232 ~~r~~~~~~~~~ 243 (315)
T 4asc_A 232 QERSSLSLVSLV 243 (315)
T ss_dssp SCCBSCEEEEET
T ss_pred CcccceeEEEEC
Confidence 999999888763
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.86 E-value=6.4e-21 Score=112.98 Aligned_cols=90 Identities=27% Similarity=0.473 Sum_probs=80.4
Q ss_pred CccccCCCCCCcceEEEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCceEEcCCCC
Q psy2980 1 MLRGWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMSHLP 80 (92)
Q Consensus 1 v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~~ 80 (92)
|+||.+ ....+++++||+.+++|..++++|.+|..+++++++++||++||.+......+++++||+.+++|+.++++|
T Consensus 60 v~GG~~--~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p 137 (306)
T 3ii7_A 60 ILGGSQ--LFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSML 137 (306)
T ss_dssp EECCBS--SSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCS
T ss_pred EEeCCC--CCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCc
Confidence 578886 445567999999999999999999999999999999999999998744667899999999999999999999
Q ss_pred CCccceeeEEcC
Q psy2980 81 SARSWLGCVPLQ 92 (92)
Q Consensus 81 ~~~~~~~~~~~~ 92 (92)
.+|..|++++++
T Consensus 138 ~~r~~~~~~~~~ 149 (306)
T 3ii7_A 138 TQRCSHGMVEAN 149 (306)
T ss_dssp SCCBSCEEEEET
T ss_pred CCcceeEEEEEC
Confidence 999999888753
No 4
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.86 E-value=3.3e-21 Score=114.87 Aligned_cols=92 Identities=20% Similarity=0.407 Sum_probs=80.9
Q ss_pred CccccCC-CCCCcceEEEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCceEEcCCC
Q psy2980 1 MLRGWHA-STENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMSHL 79 (92)
Q Consensus 1 v~GG~~~-~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~ 79 (92)
|+||.+. .....+++++||+.+++|..++++|.+|..+++++.+++||++||........+++++||+.+++|+.++++
T Consensus 114 v~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~ 193 (318)
T 2woz_A 114 VVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPM 193 (318)
T ss_dssp EEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCC
T ss_pred EEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCC
Confidence 4788762 344567799999999999999999999999999999999999999865466789999999999999999999
Q ss_pred CCCccceeeEEcC
Q psy2980 80 PSARSWLGCVPLQ 92 (92)
Q Consensus 80 ~~~~~~~~~~~~~ 92 (92)
|.+|..|++++++
T Consensus 194 p~~r~~~~~~~~~ 206 (318)
T 2woz_A 194 KTPRSMFGVAIHK 206 (318)
T ss_dssp SSCCBSCEEEEET
T ss_pred CCCcccceEEEEC
Confidence 9999999888753
No 5
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.86 E-value=3.4e-21 Score=114.78 Aligned_cols=91 Identities=35% Similarity=0.617 Sum_probs=80.1
Q ss_pred CccccCCCCCCcceEEEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCceEEcCCCC
Q psy2980 1 MLRGWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMSHLP 80 (92)
Q Consensus 1 v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~~ 80 (92)
|+||.+......+++++||+.+++|..++++|.+|..+++++++++||++||... ....+++++||+.+++|+.++++|
T Consensus 163 v~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~p 241 (318)
T 2woz_A 163 CLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTE-DGLSASVEAFDLKTNKWEVMTEFP 241 (318)
T ss_dssp EECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEET-TEEEEEEEEEETTTCCEEECCCCS
T ss_pred EEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCC-CCccceEEEEECCCCeEEECCCCC
Confidence 5788764444566799999999999999999999999999999999999999865 456789999999999999999999
Q ss_pred CCccceeeEEcC
Q psy2980 81 SARSWLGCVPLQ 92 (92)
Q Consensus 81 ~~~~~~~~~~~~ 92 (92)
.+|..|++++++
T Consensus 242 ~~r~~~~~~~~~ 253 (318)
T 2woz_A 242 QERSSISLVSLA 253 (318)
T ss_dssp SCCBSCEEEEET
T ss_pred CcccceEEEEEC
Confidence 999999887753
No 6
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.86 E-value=7.2e-21 Score=112.77 Aligned_cols=92 Identities=27% Similarity=0.455 Sum_probs=79.9
Q ss_pred CccccCCCCCCcceEEEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEcCcCCCCC---ccceEEEEeCCCCceEEcC
Q psy2980 1 MLRGWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDG---YHDSIECYDVDNDSWEIMS 77 (92)
Q Consensus 1 v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~---~~~~~~~y~~~~~~W~~~~ 77 (92)
|+||.+......+++++||+.+++|..++++|.+|..++++.++++||++||...... ..+++++||+.+++|+.++
T Consensus 106 v~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 185 (306)
T 3ii7_A 106 TSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELC 185 (306)
T ss_dssp EECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEEC
T ss_pred EECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECC
Confidence 5789864444556799999999999999999999999999999999999999865222 2899999999999999999
Q ss_pred CCCCCccceeeEEcC
Q psy2980 78 HLPSARSWLGCVPLQ 92 (92)
Q Consensus 78 ~~~~~~~~~~~~~~~ 92 (92)
++|.+|..|++++++
T Consensus 186 ~~p~~r~~~~~~~~~ 200 (306)
T 3ii7_A 186 PMIEARKNHGLVFVK 200 (306)
T ss_dssp CCSSCCBSCEEEEET
T ss_pred CccchhhcceEEEEC
Confidence 999999999888753
No 7
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.86 E-value=6.6e-21 Score=113.21 Aligned_cols=89 Identities=39% Similarity=0.791 Sum_probs=79.3
Q ss_pred CccccCCCCCCcceEEEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCceEEcCCCC
Q psy2980 1 MLRGWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMSHLP 80 (92)
Q Consensus 1 v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~~ 80 (92)
|+||.+.. ...+++++||+.+++|..++++|.+|..+++++++++||++||.+. ....++++.||+.+++|+.+++||
T Consensus 220 v~GG~~~~-~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~-~~~~~~v~~yd~~~~~W~~~~~~p 297 (308)
T 1zgk_A 220 AAGGYDGQ-DQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDG-HTFLDSVECYDPDTDTWSEVTRMT 297 (308)
T ss_dssp EECCBCSS-SBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCS-SCBCCEEEEEETTTTEEEEEEECS
T ss_pred EEeCCCCC-CccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCC-CcccceEEEEcCCCCEEeecCCCC
Confidence 57888633 2356699999999999999999999999999999999999999876 566899999999999999999999
Q ss_pred CCccceeeEEc
Q psy2980 81 SARSWLGCVPL 91 (92)
Q Consensus 81 ~~~~~~~~~~~ 91 (92)
.+|..++++++
T Consensus 298 ~~r~~~~~~~l 308 (308)
T 1zgk_A 298 SGRSGVGVAVT 308 (308)
T ss_dssp SCCBSCEEEEC
T ss_pred CCcccceeEeC
Confidence 99999999875
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.85 E-value=1.7e-20 Score=110.93 Aligned_cols=89 Identities=26% Similarity=0.577 Sum_probs=78.8
Q ss_pred CccccCCCCCCcceEEEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCceEEcCCCC
Q psy2980 1 MLRGWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMSHLP 80 (92)
Q Consensus 1 v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~~ 80 (92)
|+||.+... .+++++||+.+++|..++++|.+|..++++.+++.||++||... ....++++.||+.+++|+.++++|
T Consensus 20 v~GG~~~~~--~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~~~p 96 (302)
T 2xn4_A 20 VVGGQAPKA--IRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNG-SLRVRTVDSYDPVKDQWTSVANMR 96 (302)
T ss_dssp EECCBSSSB--CCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCS-SSBCCCEEEEETTTTEEEEECCCS
T ss_pred EECCCCCCC--CCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCC-CccccceEEECCCCCceeeCCCCC
Confidence 478976543 34599999999999999999999999999999999999999865 456889999999999999999999
Q ss_pred CCccceeeEEcC
Q psy2980 81 SARSWLGCVPLQ 92 (92)
Q Consensus 81 ~~~~~~~~~~~~ 92 (92)
.+|..|++++++
T Consensus 97 ~~r~~~~~~~~~ 108 (302)
T 2xn4_A 97 DRRSTLGAAVLN 108 (302)
T ss_dssp SCCBSCEEEEET
T ss_pred ccccceEEEEEC
Confidence 999999988753
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.85 E-value=1.7e-20 Score=111.04 Aligned_cols=90 Identities=27% Similarity=0.581 Sum_probs=79.1
Q ss_pred CccccCCCCCCcceEEEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCceEEcC-CC
Q psy2980 1 MLRGWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMS-HL 79 (92)
Q Consensus 1 v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~~-~~ 79 (92)
|+||.+.. ...+++++||+.+++|..++++|.+|..++++.++++||++||.+. ....+++++||+.+++|+.++ +|
T Consensus 209 v~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~-~~~~~~v~~yd~~~~~W~~~~~~~ 286 (302)
T 2xn4_A 209 AVGGHDGP-LVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDG-SCNLASVEYYNPTTDKWTVVSSCM 286 (302)
T ss_dssp EECCBSSS-SBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCS-SSBCCCEEEEETTTTEEEECSSCC
T ss_pred EECCCCCC-cccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCC-CcccccEEEEcCCCCeEEECCccc
Confidence 57887643 3345699999999999999999999999999999999999999865 456889999999999999997 89
Q ss_pred CCCccceeeEEcC
Q psy2980 80 PSARSWLGCVPLQ 92 (92)
Q Consensus 80 ~~~~~~~~~~~~~ 92 (92)
+.+|..|++++++
T Consensus 287 ~~~r~~~~~~~~~ 299 (302)
T 2xn4_A 287 STGRSYAGVTVID 299 (302)
T ss_dssp SSCCBSCEEEEEE
T ss_pred CcccccceEEEec
Confidence 9999999998863
No 10
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.85 E-value=3.1e-20 Score=110.35 Aligned_cols=90 Identities=30% Similarity=0.599 Sum_probs=79.3
Q ss_pred CccccCCCCCCcceEEEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCceEEcCCCC
Q psy2980 1 MLRGWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMSHLP 80 (92)
Q Consensus 1 v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~~ 80 (92)
|+||.+... ..+++++||+.+++|..++++|.+|..+++++++++||++||.+. ....++++.||+.+++|+.++++|
T Consensus 173 v~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~v~~yd~~~~~W~~~~~~p 250 (308)
T 1zgk_A 173 AVGGFDGTN-RLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDG-QDQLNSVERYDVETETWTFVAPMK 250 (308)
T ss_dssp EECCBCSSC-BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCS-SSBCCCEEEEETTTTEEEECCCCS
T ss_pred EEeCCCCCC-cCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCC-CCccceEEEEeCCCCcEEECCCCC
Confidence 578886433 356699999999999999999999999999999999999999875 456899999999999999999999
Q ss_pred CCccceeeEEcC
Q psy2980 81 SARSWLGCVPLQ 92 (92)
Q Consensus 81 ~~~~~~~~~~~~ 92 (92)
.+|..+++++++
T Consensus 251 ~~r~~~~~~~~~ 262 (308)
T 1zgk_A 251 HRRSALGITVHQ 262 (308)
T ss_dssp SCCBSCEEEEET
T ss_pred CCccceEEEEEC
Confidence 999999887753
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.84 E-value=5.9e-20 Score=108.55 Aligned_cols=90 Identities=31% Similarity=0.645 Sum_probs=79.1
Q ss_pred CccccCCCCCCcceEEEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCceEEcCCCC
Q psy2980 1 MLRGWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMSHLP 80 (92)
Q Consensus 1 v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~~ 80 (92)
|+||.+... ..+++++||+.+++|..++++|.+|..++++.++++||++||.+. ....++++.||+.+++|+.++++|
T Consensus 164 v~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~-~~~~~~v~~yd~~~~~W~~~~~~p 241 (301)
T 2vpj_A 164 CLGGYDGLN-ILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDG-TAHLSSVEAYNIRTDSWTTVTSMT 241 (301)
T ss_dssp EECCBCSSC-BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCS-SSBCCCEEEEETTTTEEEEECCCS
T ss_pred EECCCCCCc-ccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCC-CcccceEEEEeCCCCcEEECCCCC
Confidence 478876432 456699999999999999999999999999999999999999875 445889999999999999999999
Q ss_pred CCccceeeEEcC
Q psy2980 81 SARSWLGCVPLQ 92 (92)
Q Consensus 81 ~~~~~~~~~~~~ 92 (92)
.+|..+++++++
T Consensus 242 ~~r~~~~~~~~~ 253 (301)
T 2vpj_A 242 TPRCYVGATVLR 253 (301)
T ss_dssp SCCBSCEEEEET
T ss_pred CcccceeEEEEC
Confidence 999999887753
No 12
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.84 E-value=4.4e-20 Score=109.10 Aligned_cols=91 Identities=24% Similarity=0.503 Sum_probs=79.5
Q ss_pred CccccCCCCCCcceEEEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCc---eEEcC
Q psy2980 1 MLRGWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDS---WEIMS 77 (92)
Q Consensus 1 v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~---W~~~~ 77 (92)
|+||........+++++||+.+++|..++++|.+|..++++..++.||++||..+ ....++++.||+.+++ |+.++
T Consensus 19 ~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~-~~~~~~~~~~d~~~~~~~~W~~~~ 97 (301)
T 2vpj_A 19 VVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDG-RSRLSSVECLDYTADEDGVWYSVA 97 (301)
T ss_dssp EECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCS-SCBCCCEEEEETTCCTTCCCEEEC
T ss_pred EEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCC-CccCceEEEEECCCCCCCeeEECC
Confidence 4788433334556799999999999999999999999999999999999999875 5678999999999999 99999
Q ss_pred CCCCCccceeeEEcC
Q psy2980 78 HLPSARSWLGCVPLQ 92 (92)
Q Consensus 78 ~~~~~~~~~~~~~~~ 92 (92)
++|.+|..|++++++
T Consensus 98 ~~p~~r~~~~~~~~~ 112 (301)
T 2vpj_A 98 PMNVRRGLAGATTLG 112 (301)
T ss_dssp CCSSCCBSCEEEEET
T ss_pred CCCCCccceeEEEEC
Confidence 999999999988753
No 13
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.81 E-value=3.6e-19 Score=115.50 Aligned_cols=89 Identities=15% Similarity=0.247 Sum_probs=79.4
Q ss_pred CccccCCCCCCcceEEEeeCCCCeEEeeC-C-----CCCCcccceEEEE--CCEEEEEcCcCCCCCccceEEEEeCCCCc
Q psy2980 1 MLRGWHASTENTNRVECYHIAENTWEYKS-P-----MKEKRYRPGIAVI--DGKIYVLGGEEGWDGYHDSIECYDVDNDS 72 (92)
Q Consensus 1 v~GG~~~~~~~~~~v~~yd~~~~~W~~~~-~-----~~~~~~~~~~~~~--~~~iy~~GG~~~~~~~~~~~~~y~~~~~~ 72 (92)
|+||.+. ...+++++||+.+++|..++ + +|.+|..|+++++ +++||++||.......++++++||+.+++
T Consensus 402 v~GG~~~--~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~ 479 (695)
T 2zwa_A 402 YMGGSNP--YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTRE 479 (695)
T ss_dssp EECCBSS--SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTE
T ss_pred EECCCCC--CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCc
Confidence 5799865 45567999999999999998 5 7899999999999 99999999997645578999999999999
Q ss_pred eEEcCCCCCCccceeeEEc
Q psy2980 73 WEIMSHLPSARSWLGCVPL 91 (92)
Q Consensus 73 W~~~~~~~~~~~~~~~~~~ 91 (92)
|+.+++||.+|..|+++++
T Consensus 480 W~~~~~~p~~R~~h~~~~~ 498 (695)
T 2zwa_A 480 WSMIKSLSHTRFRHSACSL 498 (695)
T ss_dssp EEECCCCSBCCBSCEEEEC
T ss_pred EEECCCCCCCcccceEEEE
Confidence 9999999999999999875
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.79 E-value=1.2e-18 Score=105.11 Aligned_cols=86 Identities=17% Similarity=0.263 Sum_probs=73.8
Q ss_pred CccccCCCCCCcceEEEeeCC--CCeEEeeCCCC-CCcccceEEEECCEEEEEcCc-C---CCCCccceEEEEeCCCCce
Q psy2980 1 MLRGWHASTENTNRVECYHIA--ENTWEYKSPMK-EKRYRPGIAVIDGKIYVLGGE-E---GWDGYHDSIECYDVDNDSW 73 (92)
Q Consensus 1 v~GG~~~~~~~~~~v~~yd~~--~~~W~~~~~~~-~~~~~~~~~~~~~~iy~~GG~-~---~~~~~~~~~~~y~~~~~~W 73 (92)
|+||.+. +++++||+. +++|..++++| .+|..+++++++++||++||. . .....++++++||+.+++|
T Consensus 24 v~GG~~~-----~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 24 IGLGSAG-----TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp EECGGGT-----TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred EEeCcCC-----CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 4788653 259999998 48999999999 899999999999999999998 3 2245689999999999999
Q ss_pred EEcCCCC-CCccceeeEEc
Q psy2980 74 EIMSHLP-SARSWLGCVPL 91 (92)
Q Consensus 74 ~~~~~~~-~~~~~~~~~~~ 91 (92)
+++++|+ .+|..|+++++
T Consensus 99 ~~~~~~~p~~r~~~~~~~~ 117 (357)
T 2uvk_A 99 VKLMSHAPMGMAGHVTFVH 117 (357)
T ss_dssp EECSCCCSSCCSSEEEEEE
T ss_pred EECCCCCCcccccceEEEE
Confidence 9999998 89999887765
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.79 E-value=4e-19 Score=107.11 Aligned_cols=91 Identities=20% Similarity=0.212 Sum_probs=73.8
Q ss_pred Ccccc-C---CCCCCcceEEEeeCCCCeEEeeCCCC-CCcccceEEEECCEEEEEcCcCCCC------------------
Q psy2980 1 MLRGW-H---ASTENTNRVECYHIAENTWEYKSPMK-EKRYRPGIAVIDGKIYVLGGEEGWD------------------ 57 (92)
Q Consensus 1 v~GG~-~---~~~~~~~~v~~yd~~~~~W~~~~~~~-~~~~~~~~~~~~~~iy~~GG~~~~~------------------ 57 (92)
|+||. + ......+++++||+.+++|..+++++ .+|..+++++.+++||++||.+...
T Consensus 70 v~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
T 2uvk_A 70 VFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAI 149 (357)
T ss_dssp EECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred EEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccch
Confidence 57887 2 12234566999999999999999887 8999999999999999999975311
Q ss_pred ---------------CccceEEEEeCCCCceEEcCCCCCCccc-eeeEEc
Q psy2980 58 ---------------GYHDSIECYDVDNDSWEIMSHLPSARSW-LGCVPL 91 (92)
Q Consensus 58 ---------------~~~~~~~~y~~~~~~W~~~~~~~~~~~~-~~~~~~ 91 (92)
..++++++||+.+++|+.++++|.++.. ++++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~ 199 (357)
T 2uvk_A 150 DKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK 199 (357)
T ss_dssp HHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEE
T ss_pred hhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEE
Confidence 2468999999999999999999987665 777664
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.77 E-value=1.3e-18 Score=112.92 Aligned_cols=87 Identities=14% Similarity=0.323 Sum_probs=75.5
Q ss_pred CccccCCCCCCcceEEEeeCCCCeEEeeCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccceEEEEeCCCCceEEcCC-
Q psy2980 1 MLRGWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVI-DGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMSH- 78 (92)
Q Consensus 1 v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~~~- 78 (92)
|+||.+......+++++||+.+++|..++++|.+|..|+++++ +++||++||..... ++++||+.+++|+.+.+
T Consensus 456 v~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~~W~~~~~~ 531 (695)
T 2zwa_A 456 LIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEEIFKDVTPK 531 (695)
T ss_dssp EECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTTEEEECCCS
T ss_pred EEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCCceEEccCC
Confidence 5899875444556699999999999999999999999999996 99999999986522 89999999999999986
Q ss_pred --CCCCccceeeEEc
Q psy2980 79 --LPSARSWLGCVPL 91 (92)
Q Consensus 79 --~~~~~~~~~~~~~ 91 (92)
+|.+|..|+++++
T Consensus 532 g~~p~~r~~~~a~v~ 546 (695)
T 2zwa_A 532 DEFFQNSLVSAGLEF 546 (695)
T ss_dssp SGGGGSCCBSCEEEE
T ss_pred CCCCCcccceeEEEE
Confidence 8999999886653
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.62 E-value=1.3e-15 Score=98.21 Aligned_cols=79 Identities=19% Similarity=0.394 Sum_probs=65.3
Q ss_pred CccccCCCCCCcceEEEeeCCCCeEEeeCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccceEEEEeCCCCceEEc---
Q psy2980 1 MLRGWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVI-DGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIM--- 76 (92)
Q Consensus 1 v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~--- 76 (92)
++||.+.. ++++||+.+++|..+++|+.+|..++++++ +++||++||........+++++||+.+++|+.+
T Consensus 258 v~GG~~~~-----~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~ 332 (656)
T 1k3i_A 258 VTGGNDAK-----KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNA 332 (656)
T ss_dssp EECSSSTT-----CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTS
T ss_pred EeCCCCCC-----ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCc
Confidence 46776432 499999999999999999999999999999 999999999533355789999999999999997
Q ss_pred --CCCCCCcc
Q psy2980 77 --SHLPSARS 84 (92)
Q Consensus 77 --~~~~~~~~ 84 (92)
.+|+..+.
T Consensus 333 ~~~p~~~~~~ 342 (656)
T 1k3i_A 333 KVNPMLTADK 342 (656)
T ss_dssp CSGGGCCCCT
T ss_pred cccccccccc
Confidence 45555543
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.61 E-value=2.2e-15 Score=97.17 Aligned_cols=78 Identities=14% Similarity=0.062 Sum_probs=68.8
Q ss_pred eEEEeeCCCCeEEeeC--CCCCCcccceEEEE-CCEEEEEcCcCC-----CCCccceEEEEeCCCCceEEcCCCCCCccc
Q psy2980 14 RVECYHIAENTWEYKS--PMKEKRYRPGIAVI-DGKIYVLGGEEG-----WDGYHDSIECYDVDNDSWEIMSHLPSARSW 85 (92)
Q Consensus 14 ~v~~yd~~~~~W~~~~--~~~~~~~~~~~~~~-~~~iy~~GG~~~-----~~~~~~~~~~y~~~~~~W~~~~~~~~~~~~ 85 (92)
.+++||+.+++|..+. .||.+|..++++++ +++||++||.+. ......+++.|||.+++|+.+.+++.+|..
T Consensus 433 ~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~ 512 (656)
T 1k3i_A 433 IITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVY 512 (656)
T ss_dssp EEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCT
T ss_pred EEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCcccc
Confidence 6899999999999986 89999999988888 999999999752 134678999999999999999999999999
Q ss_pred eeeEEc
Q psy2980 86 LGCVPL 91 (92)
Q Consensus 86 ~~~~~~ 91 (92)
|+++++
T Consensus 513 hs~a~l 518 (656)
T 1k3i_A 513 HSISLL 518 (656)
T ss_dssp TEEEEE
T ss_pred ccHhhc
Confidence 987665
No 19
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=94.25 E-value=0.42 Score=27.84 Aligned_cols=54 Identities=11% Similarity=0.127 Sum_probs=39.6
Q ss_pred ceEEEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCc
Q psy2980 13 NRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDS 72 (92)
Q Consensus 13 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~ 72 (92)
+.+..+|+.+.+-..--.++..-.+.+++..+++||+.... .+.++.||+.+-+
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~------~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR------NHEGFVYDLATLT 96 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS------SSEEEEEETTTTE
T ss_pred ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee------CCEEEEEECCcCc
Confidence 45999999998865544555545556778889999998643 4578888887654
No 20
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=93.53 E-value=0.64 Score=27.43 Aligned_cols=54 Identities=13% Similarity=0.089 Sum_probs=37.6
Q ss_pred ceEEEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCc
Q psy2980 13 NRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDS 72 (92)
Q Consensus 13 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~ 72 (92)
+.+..+|+.+.+-..--.++..-.+.+++..+++||+.... .+.+..||+.+.+
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~------~~~v~v~D~~t~~ 118 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK------NGLGFVWNIRNLR 118 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS------SSEEEEEETTTCC
T ss_pred ceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee------CCEEEEEECccCc
Confidence 45899999998754443444333445677889999998643 3578888887654
No 21
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=89.46 E-value=2 Score=25.00 Aligned_cols=50 Identities=22% Similarity=0.351 Sum_probs=36.1
Q ss_pred cceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCceEEcCCCCCCccceeeEE
Q psy2980 37 RPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMSHLPSARSWLGCVP 90 (92)
Q Consensus 37 ~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~~~~~~~~ 90 (92)
-.++...++.+|.-.|..+ .+.+..+|+.+.+-....+++...+..+.+.
T Consensus 23 tqGL~~~~~~LyestG~~g----~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~ 72 (243)
T 3mbr_X 23 TEGLFYLRGHLYESTGETG----RSSVRKVDLETGRILQRAEVPPPYFGAGIVA 72 (243)
T ss_dssp EEEEEEETTEEEEEECCTT----SCEEEEEETTTCCEEEEEECCTTCCEEEEEE
T ss_pred cccEEEECCEEEEECCCCC----CceEEEEECCCCCEEEEEeCCCCcceeEEEE
Confidence 3477778899999888644 5789999999987766666665555555443
No 22
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=88.94 E-value=2.3 Score=25.01 Aligned_cols=55 Identities=16% Similarity=0.181 Sum_probs=36.9
Q ss_pred cceEEEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCc
Q psy2980 12 TNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDS 72 (92)
Q Consensus 12 ~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~ 72 (92)
.+.+..+|+.+++-..--+++......+++..++.||+.... .+.+..||+.+.+
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~------~~~v~viD~~t~~ 97 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL------KNIGFIYDRRTLS 97 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT------CSEEEEEETTTTE
T ss_pred CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec------CCEEEEEECCCCc
Confidence 356999999988754432333323344567778899998543 4678899987654
No 23
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=86.35 E-value=3 Score=24.61 Aligned_cols=61 Identities=16% Similarity=0.131 Sum_probs=37.5
Q ss_pred EEeeCCCCCCccc--ceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCceEEcCCCCCCccceeeE
Q psy2980 25 WEYKSPMKEKRYR--PGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMSHLPSARSWLGCV 89 (92)
Q Consensus 25 W~~~~~~~~~~~~--~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~~~~~~~ 89 (92)
++-+...|..... .++...++.||.-.|..+ .+.+..+|+.+.+-...-+++...+..+.+
T Consensus 31 ~~vv~~~phd~~~ftqGL~~~~~~LyestG~~g----~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit 93 (262)
T 3nol_A 31 YQIVHSYPHDTKAFTEGFFYRNGYFYESTGLNG----RSSIRKVDIESGKTLQQIELGKRYFGEGIS 93 (262)
T ss_dssp EEEEEEEECCTTCEEEEEEEETTEEEEEEEETT----EEEEEEECTTTCCEEEEEECCTTCCEEEEE
T ss_pred eEEEEEecCCCCcccceEEEECCEEEEECCCCC----CceEEEEECCCCcEEEEEecCCccceeEEE
Confidence 3334334443333 456666889999887643 578999999988765555555444444443
No 24
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=84.00 E-value=2.4 Score=25.10 Aligned_cols=51 Identities=8% Similarity=0.046 Sum_probs=33.3
Q ss_pred EEEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCc
Q psy2980 15 VECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDS 72 (92)
Q Consensus 15 v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~ 72 (92)
+..+|+.+.+-..-- ++..-.+.+++..++.||+.... .+.++.||+.+.+
T Consensus 77 v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~------~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 77 LRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT------EGLLFTWSGMPPQ 127 (268)
T ss_dssp EEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS------SCEEEEEETTTTE
T ss_pred EEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc------CCEEEEEECCcCc
Confidence 888888887643322 44333445577778889998543 3578888887654
No 25
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=83.65 E-value=5.1 Score=23.77 Aligned_cols=52 Identities=10% Similarity=-0.001 Sum_probs=35.3
Q ss_pred cceEEEeeCCCCeE-EeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCce
Q psy2980 12 TNRVECYHIAENTW-EYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSW 73 (92)
Q Consensus 12 ~~~v~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W 73 (92)
.+.+++||+.+.+- ..++ .+..+.+++.-+..||+.-| .+.++.+||.+.+-
T Consensus 115 ~~~v~V~D~~Tl~~~~ti~---~~~eGwGLt~Dg~~L~vSdG-------s~~l~~iDp~T~~v 167 (268)
T 3nok_A 115 EGLLFTWSGMPPQRERTTR---YSGEGWGLCYWNGKLVRSDG-------GTMLTFHEPDGFAL 167 (268)
T ss_dssp SCEEEEEETTTTEEEEEEE---CSSCCCCEEEETTEEEEECS-------SSEEEEECTTTCCE
T ss_pred CCEEEEEECCcCcEEEEEe---CCCceeEEecCCCEEEEECC-------CCEEEEEcCCCCeE
Confidence 45689999987653 3333 23345667777888888754 45789999987643
No 26
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=74.95 E-value=8.6 Score=22.46 Aligned_cols=59 Identities=10% Similarity=0.170 Sum_probs=31.7
Q ss_pred eEEEeeCCCCeEEeeCCCCCCcccceEEE-ECCEEEEEcCcCCCCCccceEEEEeCCCCceEEc
Q psy2980 14 RVECYHIAENTWEYKSPMKEKRYRPGIAV-IDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIM 76 (92)
Q Consensus 14 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~ 76 (92)
.++.+|..+.++..+........-..++. -++++|+.+... ....+..||....+++.+
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~----~~~~v~~~~~~~g~~~~~ 78 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED----DEGGIAAWQIDGQTAHKL 78 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEET----TEEEEEEEEEETTEEEEE
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecC----CCceEEEEEecCCcEEEe
Confidence 47777888888766532221111122333 256677665321 135677888766665544
No 27
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=73.41 E-value=12 Score=22.11 Aligned_cols=56 Identities=14% Similarity=0.125 Sum_probs=37.9
Q ss_pred cceEEEeeCCCCeEEeeC-----CCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCce
Q psy2980 12 TNRVECYHIAENTWEYKS-----PMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSW 73 (92)
Q Consensus 12 ~~~v~~yd~~~~~W~~~~-----~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W 73 (92)
...+..||+.++++..-- ..+.+.....++..++++|+.... .+.+..+|+.+.+-
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~------~~~v~viD~~t~~~ 76 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN------SHVIFAIDINTFKE 76 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG------GTEEEEEETTTCCE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC------CCEEEEEECcccEE
Confidence 445999999998875421 112333334566788999998642 46789999987765
No 28
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=65.39 E-value=20 Score=21.57 Aligned_cols=56 Identities=11% Similarity=0.133 Sum_probs=33.2
Q ss_pred eEEEeeCCCCeEEeeCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccceEEEEeCCCCceEE
Q psy2980 14 RVECYHIAENTWEYKSPMKEKRYRPGIAVI-DGKIYVLGGEEGWDGYHDSIECYDVDNDSWEI 75 (92)
Q Consensus 14 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~ 75 (92)
.++.+|+.+.++..+..++.+....+++.. ++.+++.++.+ ..+..||+.+.+...
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~------~~i~~~d~~~g~~~~ 158 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLED------EGMDVLDINSGQTVR 158 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTS------SSEEEEETTTCCEEE
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCC------CeEEEEECCCCeEee
Confidence 478888877666555443333322233333 56777776543 358889988776554
No 29
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=63.43 E-value=20 Score=21.06 Aligned_cols=52 Identities=13% Similarity=0.083 Sum_probs=33.0
Q ss_pred ceEEEeeCCCCeEEeeCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccceEEEEeCCCCce
Q psy2980 13 NRVECYHIAENTWEYKSPMKEKRYRPGIAVI--DGKIYVLGGEEGWDGYHDSIECYDVDNDSW 73 (92)
Q Consensus 13 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W 73 (92)
..+.++|+.+.+....-.++.+.....++.. ++.+|+..+ .++.+|+.+.+.
T Consensus 203 ~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---------~v~~~d~~t~~~ 256 (328)
T 3dsm_A 203 PSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN---------DIWRMPVEADRV 256 (328)
T ss_dssp CEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS---------SEEEEETTCSSC
T ss_pred ceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc---------EEEEEECCCCce
Confidence 5699999998876533233333333445554 466787632 688899987654
No 30
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=62.12 E-value=21 Score=20.76 Aligned_cols=57 Identities=9% Similarity=0.170 Sum_probs=30.5
Q ss_pred eEEEeeCCCCeEEeeCCCCCCcccceEEEEC----CEEEEEcCcCCCCCccceEEEEeCCCCceEEc
Q psy2980 14 RVECYHIAENTWEYKSPMKEKRYRPGIAVID----GKIYVLGGEEGWDGYHDSIECYDVDNDSWEIM 76 (92)
Q Consensus 14 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~----~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~ 76 (92)
.+..||....++..+..+........+..+. +.+++.|+.+ ..+..||..+.+|..+
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~~~ 94 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEENGRWSQI 94 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------SCEEEEEEETTEEEEE
T ss_pred cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC------CEEEEEEcCCCceeEe
Confidence 3777777666665554332222222233332 4566666543 3577788877766554
No 31
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=59.70 E-value=24 Score=20.71 Aligned_cols=51 Identities=14% Similarity=0.262 Sum_probs=30.6
Q ss_pred EeeCCCCCCcc--cceEEEEC-CEEEEEcCcCCCCCccceEEEEeCCCCceEEcCCCC
Q psy2980 26 EYKSPMKEKRY--RPGIAVID-GKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMSHLP 80 (92)
Q Consensus 26 ~~~~~~~~~~~--~~~~~~~~-~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~~ 80 (92)
+.+...|.+.. -++++..+ +.+|+..|..+ .+.+..+|+.+.+-...-+++
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~~tg~v~~~i~l~ 63 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAENDTLFESTGLYG----RSSVRQVALQTGKVENIHKMD 63 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTTEEEEEECSTT----TCEEEEEETTTCCEEEEEECC
T ss_pred eEEEEEECCCCCCcccEEEeCCCeEEEECCCCC----CCEEEEEECCCCCEEEEEecC
Confidence 33444444432 24566655 78999866322 478999999988755443343
No 32
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=58.65 E-value=23 Score=20.23 Aligned_cols=65 Identities=8% Similarity=0.026 Sum_probs=32.1
Q ss_pred ceEEEeeCC--CCeEEeeCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccceEEEEeCCCCceEEcCCCCC
Q psy2980 13 NRVECYHIA--ENTWEYKSPMKEKRYRPGIAVI--DGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMSHLPS 81 (92)
Q Consensus 13 ~~v~~yd~~--~~~W~~~~~~~~~~~~~~~~~~--~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~~~ 81 (92)
..+..||.. +.++..+..++....-..++.. +..+|+.+..++ .-.++..|+.+.+++.+..++.
T Consensus 253 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~----~v~v~~~d~~~g~~~~~~~~~~ 321 (343)
T 1ri6_A 253 SLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSH----HISVYEIVGEQGLLHEKGRYAV 321 (343)
T ss_dssp TEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTC----EEEEEEEETTTTEEEEEEEEEC
T ss_pred CEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCC----eEEEEEEcCCCceeeEcccccc
Confidence 357777776 4455555433322222223332 234666543222 2234444877888887765543
No 33
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=55.55 E-value=29 Score=20.42 Aligned_cols=57 Identities=11% Similarity=0.165 Sum_probs=31.2
Q ss_pred ceEEEeeCCCCeEEeeCCCCCCc---------ccceEEE-ECC-EEEEEcCcCCCCCccceEEEEeCCCCce
Q psy2980 13 NRVECYHIAENTWEYKSPMKEKR---------YRPGIAV-IDG-KIYVLGGEEGWDGYHDSIECYDVDNDSW 73 (92)
Q Consensus 13 ~~v~~yd~~~~~W~~~~~~~~~~---------~~~~~~~-~~~-~iy~~GG~~~~~~~~~~~~~y~~~~~~W 73 (92)
..++.+|+.+++...+...+..- .....+. -++ .|++.....+ ...++.++.....|
T Consensus 320 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g----~~~l~~~~l~~~~~ 387 (388)
T 3pe7_A 320 PFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHG----KPALYLATLPESVW 387 (388)
T ss_dssp CEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTS----SCEEEEEECCGGGG
T ss_pred CEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCC----ceeEEEEECChhcc
Confidence 36999999988876665322200 1122222 234 4555443322 45688888876655
No 34
>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens}
Probab=54.39 E-value=10 Score=19.97 Aligned_cols=18 Identities=11% Similarity=-0.016 Sum_probs=15.4
Q ss_pred ceEEEeeCCCCeEEeeCC
Q psy2980 13 NRVECYHIAENTWEYKSP 30 (92)
Q Consensus 13 ~~v~~yd~~~~~W~~~~~ 30 (92)
+.|..||+.+++|.....
T Consensus 18 A~Vm~~Dd~tk~WlP~gg 35 (130)
T 3syx_A 18 AVVMTRDDSSGGWLPLGG 35 (130)
T ss_dssp EEEEEECSSSSCEEESSS
T ss_pred EEeeeEcCCCCceEeCCC
Confidence 468999999999998864
No 35
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=53.39 E-value=32 Score=20.17 Aligned_cols=59 Identities=8% Similarity=0.037 Sum_probs=27.6
Q ss_pred EEEeeCCCCeEEeeCCCCCCcccceEEEE-C-CEEEEEcCcCCCCCccceE--EEEeCCCCceEEcC
Q psy2980 15 VECYHIAENTWEYKSPMKEKRYRPGIAVI-D-GKIYVLGGEEGWDGYHDSI--ECYDVDNDSWEIMS 77 (92)
Q Consensus 15 v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~-~~iy~~GG~~~~~~~~~~~--~~y~~~~~~W~~~~ 77 (92)
++.+|+.+.++..+... ....-..++.. + ..||+...... ....+ +.++..+.+.+.+.
T Consensus 31 ~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~---~~~~v~~~~~~~~~g~~~~~~ 93 (361)
T 3scy_A 31 TFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSK---DQAAVSAFAFDKEKGTLHLLN 93 (361)
T ss_dssp EEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSS---TTCEEEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCC---CCCcEEEEEEeCCCCcEEEee
Confidence 56667788877666543 11111223332 2 34666653211 12344 44455445555543
No 36
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=53.18 E-value=31 Score=20.01 Aligned_cols=58 Identities=19% Similarity=0.382 Sum_probs=31.6
Q ss_pred ceEEEeeCCCCeEEeeCCCCCCccc-ceEEEE-CCEEEEEcCcCCCCCccceEEEEeCCCCceEEc
Q psy2980 13 NRVECYHIAENTWEYKSPMKEKRYR-PGIAVI-DGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIM 76 (92)
Q Consensus 13 ~~v~~yd~~~~~W~~~~~~~~~~~~-~~~~~~-~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~ 76 (92)
..+..||..+.++..+..+...... ..++.. ++.+++.|+.+ ..+..||..+.++...
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~~~ 89 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD------RNAYVWTLKGRTWKPT 89 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT------SCEEEEEEETTEEEEE
T ss_pred CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC------CeEEEEECCCCeeeee
Confidence 4588899888876555443322222 122222 34555665543 3577777766665443
No 37
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=52.78 E-value=17 Score=16.88 Aligned_cols=16 Identities=19% Similarity=0.283 Sum_probs=12.9
Q ss_pred eEEEeeCCCCeEEeeC
Q psy2980 14 RVECYHIAENTWEYKS 29 (92)
Q Consensus 14 ~v~~yd~~~~~W~~~~ 29 (92)
++++||+++|.-..+.
T Consensus 41 KIykyde~tNeI~LkK 56 (72)
T 3kvp_A 41 KIYEYNESRNEVKLKK 56 (72)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCCeEEEEE
Confidence 5899999999876553
No 38
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=52.21 E-value=13 Score=19.60 Aligned_cols=17 Identities=18% Similarity=0.530 Sum_probs=14.4
Q ss_pred cceEEEEeCCCCceEEc
Q psy2980 60 HDSIECYDVDNDSWEIM 76 (92)
Q Consensus 60 ~~~~~~y~~~~~~W~~~ 76 (92)
.-.+|.||+.+++|.+.
T Consensus 37 ~v~vY~f~~~~~~W~K~ 53 (134)
T 2lyd_A 37 HVAFYTFNSSQNEWEKT 53 (134)
T ss_dssp EEEEEEEETTTTEEEEE
T ss_pred eEEEEEecCCcCceeEc
Confidence 56789999999999875
No 39
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=52.07 E-value=35 Score=20.24 Aligned_cols=57 Identities=14% Similarity=0.373 Sum_probs=34.3
Q ss_pred ceEEEeeCCCC--eEEeeCCCC-------CCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCC--ceEEc
Q psy2980 13 NRVECYHIAEN--TWEYKSPMK-------EKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDND--SWEIM 76 (92)
Q Consensus 13 ~~v~~yd~~~~--~W~~~~~~~-------~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~--~W~~~ 76 (92)
..+.+||..+. .|..-.... ........+..++.+|+... ...++++|..+. .|+.-
T Consensus 63 g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 63 GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE-------KAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET-------TSEEEEEETTTCCEEEEEE
T ss_pred CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC-------CCEEEEEECCCCCEEEEEe
Confidence 36899998766 476553211 12223445567888887542 246888888754 47654
No 40
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=49.30 E-value=56 Score=21.87 Aligned_cols=58 Identities=9% Similarity=0.170 Sum_probs=32.5
Q ss_pred ceEEEeeCCCCeEEeeCCCCCCcccceEEEE--C--CEEEEEcCcCCCCCccceEEEEeCCCCceEEc
Q psy2980 13 NRVECYHIAENTWEYKSPMKEKRYRPGIAVI--D--GKIYVLGGEEGWDGYHDSIECYDVDNDSWEIM 76 (92)
Q Consensus 13 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~--~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~ 76 (92)
..+..||...+++..+..+........++.+ + +.+++.|+.+ ..+..||..+.+|..+
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D------g~I~vwd~~~~~~~~~ 92 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEENGRWSQI 92 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT------SCEEEEEEETTEEEEE
T ss_pred CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC------CeEEEEECCCCccccc
Confidence 3478888776666665443322222223333 2 4566666654 3577788777766544
No 41
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=47.14 E-value=26 Score=19.69 Aligned_cols=56 Identities=7% Similarity=0.282 Sum_probs=27.3
Q ss_pred eEEEeeCCCCeEEeeCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccceEEEEeCCCCceEEcC
Q psy2980 14 RVECYHIAENTWEYKSPMKEKRYRPGIAVI-DGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMS 77 (92)
Q Consensus 14 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~~ 77 (92)
.+..||..+.+....-..+.... ..++.. ++. ++.++.+ ..+..||..+.++....
T Consensus 247 ~v~iwd~~~~~~~~~~~~~~~~i-~~~~~~~~~~-~~~~~~d------g~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 247 TVRIWSKENGSLKQVITLPAISI-WSVDCMSNGD-IIVGSSD------NLVRIFSQEKSRWASED 303 (313)
T ss_dssp EEEEECTTTCCEEEEEECSSSCE-EEEEECTTSC-EEEEETT------SCEEEEESCGGGCCC--
T ss_pred EEEEEECCCCceeEEEeccCceE-EEEEEccCCC-EEEEeCC------CcEEEEeCCCCceeehh
Confidence 47778877665433222221111 112222 344 4445443 36888888877665443
No 42
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=46.85 E-value=35 Score=20.00 Aligned_cols=53 Identities=15% Similarity=0.206 Sum_probs=26.0
Q ss_pred eEEEeeCCCCeEEeeCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccceEEEEeCCCCc
Q psy2980 14 RVECYHIAENTWEYKSPMKEKRYRPGIAVI--DGKIYVLGGEEGWDGYHDSIECYDVDNDS 72 (92)
Q Consensus 14 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~iy~~GG~~~~~~~~~~~~~y~~~~~~ 72 (92)
.+..||..++.|..+..+.........+.+ ++.+++.|+.+ ..+..||..+..
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d------~~v~vwd~~~~~ 88 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD------RNAYVYEKRPDG 88 (377)
T ss_dssp CBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT------SSEEEC------
T ss_pred EEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC------CeEEEEEcCCCC
Confidence 477788888877776655432222222333 34555666543 246667766554
No 43
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=46.10 E-value=47 Score=20.05 Aligned_cols=53 Identities=11% Similarity=0.157 Sum_probs=29.0
Q ss_pred eEEEeeCCCCeEEeeCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccceEEEEeCCCCc
Q psy2980 14 RVECYHIAENTWEYKSPMKEKRYRPGIAVI--DGKIYVLGGEEGWDGYHDSIECYDVDNDS 72 (92)
Q Consensus 14 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~iy~~GG~~~~~~~~~~~~~y~~~~~~ 72 (92)
.|..+|..+.+...+-.+........++.+ ++.+++.|+.++ .+..||..+.+
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg------~v~iWd~~~~~ 180 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA------EVQLWDVQQQK 180 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS------CEEEEETTTTE
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC------eEEEEEcCCCc
Confidence 488889888876554333222222222332 455666665543 56677776554
No 44
>1qc6_A EVH1 domain from ENA/VAsp-like protein; AN incomplete seven stranded anti-parallel beta barrel closed by AN alpha helix, EVH1 domain; 2.60A {Mus musculus} SCOP: b.55.1.4
Probab=45.94 E-value=22 Score=18.47 Aligned_cols=17 Identities=18% Similarity=0.280 Sum_probs=14.5
Q ss_pred ceEEEeeCCCCeEEeeC
Q psy2980 13 NRVECYHIAENTWEYKS 29 (92)
Q Consensus 13 ~~v~~yd~~~~~W~~~~ 29 (92)
..|+.||+.+++|....
T Consensus 11 A~V~~~d~~~~~W~~~g 27 (130)
T 1qc6_A 11 ASVMVYDDTSKKWVPIK 27 (130)
T ss_dssp EEEEEEETTTTEEEECC
T ss_pred EEEEEECCCCCceeECC
Confidence 46899999999998765
No 45
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=44.92 E-value=63 Score=21.14 Aligned_cols=55 Identities=13% Similarity=0.375 Sum_probs=35.1
Q ss_pred ceEEEeeCCCCe--EEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCc--eEEc
Q psy2980 13 NRVECYHIAENT--WEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDS--WEIM 76 (92)
Q Consensus 13 ~~v~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~--W~~~ 76 (92)
..+..+|+.+.+ |+.-... +.....+++.++.+|+ |.. -..+++||..+.+ |+..
T Consensus 466 G~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagglvf~-g~~------dg~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 466 GSLRAMDPVSGKVVWEHKEHL--PLWAGVLATAGNLVFT-GTG------DGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp EEEEEECTTTCCEEEEEEESS--CCCSCCEEETTTEEEE-ECT------TSEEEEEETTTCCEEEEEE
T ss_pred ceEEEEECCCCCEEEEecCCC--CCcccceEeCCCEEEE-ECC------CCcEEEEECCCCCEEEEec
Confidence 468999998775 8764332 3344445566777776 432 2478999987654 8754
No 46
>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B*
Probab=44.53 E-value=28 Score=16.96 Aligned_cols=34 Identities=9% Similarity=-0.095 Sum_probs=16.4
Q ss_pred EEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEE
Q psy2980 16 ECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVL 50 (92)
Q Consensus 16 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~ 50 (92)
+.||+.+.+....|. +.+...+.+.+.++.||+.
T Consensus 66 ~~Fdl~~G~~~~~P~-~~~L~~~~v~~~~g~v~v~ 99 (106)
T 3dqy_A 66 GKFCVRTGKVKALPA-CKPIKVFPIKVEGDEVHVD 99 (106)
T ss_dssp CEEETTTCCEEETTC-CSCCCEECEEEETTEEEEC
T ss_pred CEEeCCCCCEeCCCC-CCCccEEEEEEECCEEEEE
Confidence 556666665555443 1222233344456666553
No 47
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=43.22 E-value=25 Score=17.83 Aligned_cols=17 Identities=24% Similarity=0.360 Sum_probs=14.3
Q ss_pred ceEEEeeCCCCeEEeeC
Q psy2980 13 NRVECYHIAENTWEYKS 29 (92)
Q Consensus 13 ~~v~~yd~~~~~W~~~~ 29 (92)
..|+.||+.+++|.+..
T Consensus 11 A~V~~~d~~~~~W~p~~ 27 (112)
T 1evh_A 11 AAVMVYDDANKKWVPAG 27 (112)
T ss_dssp EEEEEEETTTTEEEEGG
T ss_pred EEEEEEcCCCCceEECC
Confidence 45899999999998765
No 48
>1q67_A Decapping protein involved in mRNA degradation- DCP1P; beta sandwich, transcription; 2.30A {Saccharomyces cerevisiae} SCOP: b.55.1.7
Probab=43.14 E-value=21 Score=20.62 Aligned_cols=18 Identities=28% Similarity=0.612 Sum_probs=15.2
Q ss_pred ccceEEEEeCCCCceEEc
Q psy2980 59 YHDSIECYDVDNDSWEIM 76 (92)
Q Consensus 59 ~~~~~~~y~~~~~~W~~~ 76 (92)
+...+|.||+.+++|.+.
T Consensus 42 ~hasvYkfd~~~~eW~K~ 59 (231)
T 1q67_A 42 PHASLYKWDFKKDEWNKL 59 (231)
T ss_dssp EEEEEEEEETTTTEEEEE
T ss_pred CeEEEEEecCCCCceEec
Confidence 356799999999999875
No 49
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=40.33 E-value=49 Score=18.61 Aligned_cols=53 Identities=11% Similarity=0.157 Sum_probs=27.4
Q ss_pred eEEEeeCCCCeEEeeCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccceEEEEeCCCCc
Q psy2980 14 RVECYHIAENTWEYKSPMKEKRYRPGIAVI--DGKIYVLGGEEGWDGYHDSIECYDVDNDS 72 (92)
Q Consensus 14 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~iy~~GG~~~~~~~~~~~~~y~~~~~~ 72 (92)
.|..+|..+.+..+.-.+........++.+ ++..++.|+.++ .+..||..+.+
T Consensus 46 tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg------~v~iw~~~~~~ 100 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA------EVQLWDVQQQK 100 (318)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS------EEEEEETTTTE
T ss_pred EEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC------cEEEeecCCce
Confidence 478889888776544322222211122222 445666665542 56666666554
No 50
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=40.02 E-value=74 Score=20.55 Aligned_cols=62 Identities=8% Similarity=0.014 Sum_probs=34.3
Q ss_pred ceEEEeeCC-CC---eEEeeCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccceEEEEeCCCCceEEcCCC
Q psy2980 13 NRVECYHIA-EN---TWEYKSPMKEKRYRPGIAVI-DGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMSHL 79 (92)
Q Consensus 13 ~~v~~yd~~-~~---~W~~~~~~~~~~~~~~~~~~-~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~~~~ 79 (92)
.+++.+|.. +. +...+..-. .......+.. ++++|+.+..++ ...++.+|+.+.+++.+.+.
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~-~~~~~~~~~spdg~l~~~~~~~~----~~~l~~~~~~~~~~~~l~~~ 283 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGP-EEAIAQAEWAPDGSLIVATDRTG----WWNLHRVDPATGAATQLCRR 283 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEET-TBCEEEEEECTTSCEEEEECTTS----SCEEEEECTTTCCEEESSCC
T ss_pred cEEEEEEECCCCcccccEEeCCCC-CceEcceEECCCCeEEEEECCCC----CeEEEEEECCCCceeecccc
Confidence 468888887 45 333332210 1111222222 566766654332 34799999888888877543
No 51
>2w8x_A ION-channel modulator raklp; salivary gland, kunitz domains, maxik channel activation, sulphur SAD, membrane protein; 1.60A {Rhipicephalus appendiculatus}
Probab=39.84 E-value=27 Score=15.46 Aligned_cols=19 Identities=16% Similarity=0.307 Sum_probs=15.4
Q ss_pred CCcceEEEeeCCCCeEEee
Q psy2980 10 ENTNRVECYHIAENTWEYK 28 (92)
Q Consensus 10 ~~~~~v~~yd~~~~~W~~~ 28 (92)
..++.+|-|+..+++...-
T Consensus 26 rhsdqlwhynlrtnrcerg 44 (72)
T 2w8x_A 26 RHSDQLWHYNLRTNRCERG 44 (72)
T ss_dssp CEEEEEEEEETTTTEEEEE
T ss_pred ccchhhhhhhcccchhccC
Confidence 3567899999999988765
No 52
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=39.28 E-value=86 Score=21.08 Aligned_cols=56 Identities=9% Similarity=0.105 Sum_probs=31.9
Q ss_pred eEEEeeCCCCeEEeeCCCCCCc--cc-ceEEEE-CCEEEEEcCcCCCCCccceEEEEeCCCCceEEcC
Q psy2980 14 RVECYHIAENTWEYKSPMKEKR--YR-PGIAVI-DGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMS 77 (92)
Q Consensus 14 ~v~~yd~~~~~W~~~~~~~~~~--~~-~~~~~~-~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~~ 77 (92)
-+.+||+.++++.......... .. .+++.- ++.|++-.. ..+.+||+.+.+|+...
T Consensus 428 Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~ 487 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--------SALVRFNPEQRSFTTIE 487 (795)
T ss_dssp EEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--------SCEEEEETTTTEEEECC
T ss_pred ceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--------CceeEEeCCCCeEEEcc
Confidence 4778888887776664311111 11 112221 355666431 35888999988888764
No 53
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=38.98 E-value=63 Score=19.45 Aligned_cols=53 Identities=8% Similarity=0.119 Sum_probs=25.5
Q ss_pred ceEEEeeCCCC--eEEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCC--CceEE
Q psy2980 13 NRVECYHIAEN--TWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDN--DSWEI 75 (92)
Q Consensus 13 ~~v~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~--~~W~~ 75 (92)
..+.++|..+. .|..-.. ......+..++.+|+.+..+ ..++++|..+ ..|+.
T Consensus 19 g~v~a~d~~tG~~~W~~~~~----~~~s~p~~~~g~~~v~~s~d------g~l~a~d~~tG~~~w~~ 75 (369)
T 2hz6_A 19 GSLHAVSKRTGSIKWTLKED----PVLQVPTHVEEPAFLPDPND------GSLYTLGSKNNEGLTKL 75 (369)
T ss_dssp SEEEEEETTTCCEEEEEECC----CSCCCC-----CCEEECTTT------CCEEEC-----CCSEEC
T ss_pred CEEEEEECCCCCEEEEecCC----CceecceEcCCCEEEEeCCC------CEEEEEECCCCceeeee
Confidence 35899998766 4765431 11122334456677775432 3588888754 35654
No 54
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=38.94 E-value=59 Score=19.12 Aligned_cols=55 Identities=13% Similarity=0.148 Sum_probs=30.2
Q ss_pred ceEEEeeCCCCeEEeeCCCCCCcccceEEEE--CCEEEEEcCcCCCCCccceEEEEeCCCCceEE
Q psy2980 13 NRVECYHIAENTWEYKSPMKEKRYRPGIAVI--DGKIYVLGGEEGWDGYHDSIECYDVDNDSWEI 75 (92)
Q Consensus 13 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~ 75 (92)
..+..||+.+++....-... .....++.. +..+|+.++.+ ..+..||..+.+...
T Consensus 96 ~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~------~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 96 STLSVIDTTSNTVAGTVKTG--KSPLGLALSPDGKKLYVTNNGD------KTVSVINTVTKAVIN 152 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEE
T ss_pred CEEEEEECCCCeEEEEEeCC--CCcceEEECCCCCEEEEEeCCC------CEEEEEECCCCcEEE
Confidence 45899999887654332211 111223332 23566665432 478888887765443
No 55
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=38.53 E-value=89 Score=21.06 Aligned_cols=58 Identities=12% Similarity=0.287 Sum_probs=36.0
Q ss_pred eEEeeCCCCCCcccceEEEE-CCEEEEEcCcCC--C-CCccceEEEEeCCCCceEEcCCCCC
Q psy2980 24 TWEYKSPMKEKRYRPGIAVI-DGKIYVLGGEEG--W-DGYHDSIECYDVDNDSWEIMSHLPS 81 (92)
Q Consensus 24 ~W~~~~~~~~~~~~~~~~~~-~~~iy~~GG~~~--~-~~~~~~~~~y~~~~~~W~~~~~~~~ 81 (92)
+|..+..+|.....+..+.. ++.+|+..+-.. . ......+++++-...+|+.+.+.+.
T Consensus 233 tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~ 294 (737)
T 2cn3_A 233 TWKAVPGQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPY 294 (737)
T ss_dssp CCEECTTCCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCT
T ss_pred ceEECCCCCCcccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCC
Confidence 69988866654332333322 678887643210 0 1134678899999999999977654
No 56
>3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans}
Probab=37.97 E-value=41 Score=16.95 Aligned_cols=36 Identities=8% Similarity=-0.080 Sum_probs=24.0
Q ss_pred EEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEcC
Q psy2980 16 ECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGG 52 (92)
Q Consensus 16 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG 52 (92)
+.||+.+.+-...|.. .+...+.+.+.++.||+.-.
T Consensus 77 ~~Fdl~tG~~~~~P~~-~~L~~~~v~v~~g~V~v~~~ 112 (121)
T 3gce_A 77 GRFDVRTGAPTALPCV-LPVRAYDVVVDGTEILVAPK 112 (121)
T ss_dssp CEEETTTCCEEETTCC-SCCCBCCEEEETTEEEECCC
T ss_pred CEEcCCCccEeCCCCc-CCcceEEEEEECCEEEEEEC
Confidence 7888888877666542 23344556677888888643
No 57
>2jo6_A Nitrite reductase [NAD(P)H] small subunit; all beta, ISP domain, rieske iron-sulfur protein, 3-layer sandwich, structural genomics, PSI-2; NMR {Escherichia coli} SCOP: b.33.1.3
Probab=37.26 E-value=40 Score=16.62 Aligned_cols=33 Identities=9% Similarity=0.053 Sum_probs=17.6
Q ss_pred EEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEE
Q psy2980 16 ECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVL 50 (92)
Q Consensus 16 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~ 50 (92)
+.||..+.+-...|. .+...+.+.+.++.||+.
T Consensus 78 ~~Fd~~tG~~~~~P~--~~l~~~~v~v~~g~V~v~ 110 (113)
T 2jo6_A 78 QRFRLSDGLCMEDEQ--FSVKHYEARVKDGVVQLR 110 (113)
T ss_dssp EEEETTTTEETTTTT--TCCCEEEEEEETTEEEEE
T ss_pred CEEeCCCccCCCCCc--ccccEEeEEEECCEEEEE
Confidence 567776666544433 222334455556777664
No 58
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=37.07 E-value=32 Score=17.72 Aligned_cols=18 Identities=17% Similarity=0.270 Sum_probs=14.5
Q ss_pred cceEEEEeCCCC-ceEEcC
Q psy2980 60 HDSIECYDVDND-SWEIMS 77 (92)
Q Consensus 60 ~~~~~~y~~~~~-~W~~~~ 77 (92)
...++.||+.++ .|....
T Consensus 10 rA~V~~~D~~tk~~W~p~g 28 (120)
T 1ddw_A 10 RAHVFQIDPNTKKNWVPTS 28 (120)
T ss_dssp EEEEEEECTTTSCSEEESC
T ss_pred EEEEEEEcCCCCCceEeCC
Confidence 567899999885 998854
No 59
>3c0d_A Putative nitrite reductase NADPH (small subunit) oxidoreductase protein; NESG, VPR162, Q87HB1, XRAY, structure; 2.40A {Vibrio parahaemolyticus rimd 2210633} SCOP: b.33.1.3
Probab=36.75 E-value=29 Score=17.44 Aligned_cols=35 Identities=9% Similarity=0.047 Sum_probs=20.3
Q ss_pred EEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEcC
Q psy2980 16 ECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGG 52 (92)
Q Consensus 16 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG 52 (92)
+.||+.+.+-...|. .+...+.+.+.++.||+.-+
T Consensus 76 ~~Fdl~tG~~~~~P~--~~l~~~~v~v~~g~V~v~~~ 110 (119)
T 3c0d_A 76 QHFSLKSGQCLEDEA--HCLKTWRVTVDDNQVCYLAK 110 (119)
T ss_dssp CEEETTTCBBSSCTT--CBCCEECEEESSSEEEEECC
T ss_pred CEEECCCCcCCCCCC--ceeeEEEEEEECCEEEEEeC
Confidence 677877776544443 22333445556777877643
No 60
>2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida}
Probab=36.45 E-value=39 Score=16.29 Aligned_cols=33 Identities=0% Similarity=0.001 Sum_probs=14.5
Q ss_pred EEeeCCCCeEEeeCCCCCCcccceEEEECCEEEE
Q psy2980 16 ECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYV 49 (92)
Q Consensus 16 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~ 49 (92)
+.||+.+.+....|.. .+...+.+.+.++.||+
T Consensus 68 ~~Fd~~~G~~~~~P~~-~~L~~~~v~~~~g~v~v 100 (103)
T 2qpz_A 68 GRFDVCTGKALCAPVT-QNIKTYPVKIENLRVMI 100 (103)
T ss_dssp CEEETTTCCEEETTCC-SCCCEECEEEETTEEEE
T ss_pred CEEeCCCCCEeCCCCC-CCCCEEeEEEECCEEEE
Confidence 4566555555444331 11222334444555554
No 61
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=35.78 E-value=75 Score=19.38 Aligned_cols=58 Identities=12% Similarity=0.101 Sum_probs=32.6
Q ss_pred eEEEeeCCCCeEEeeCCCCCCcccceEEEE-CC-EEEEEcCcCCCCCccceEEEEeCCCCceEEcC
Q psy2980 14 RVECYHIAENTWEYKSPMKEKRYRPGIAVI-DG-KIYVLGGEEGWDGYHDSIECYDVDNDSWEIMS 77 (92)
Q Consensus 14 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~-~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~~ 77 (92)
.++.+|+.+.+...+...+. ....++.. ++ .|++.+..++ ...++.+|..+.+...+.
T Consensus 204 ~i~~~d~~tg~~~~l~~~~~--~~~~~~~spdg~~la~~~~~~g----~~~i~~~d~~~~~~~~l~ 263 (415)
T 2hqs_A 204 ALVIQTLANGAVRQVASFPR--HNGAPAFSPDGSKLAFALSKTG----SLNLYVMDLASGQIRQVT 263 (415)
T ss_dssp EEEEEETTTCCEEEEECCSS--CEEEEEECTTSSEEEEEECTTS----SCEEEEEETTTCCEEECC
T ss_pred EEEEEECCCCcEEEeecCCC--cccCEEEcCCCCEEEEEEecCC----CceEEEEECCCCCEEeCc
Confidence 58899998887766554322 11122222 33 3554443322 356888888877666554
No 62
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=35.44 E-value=64 Score=18.51 Aligned_cols=54 Identities=6% Similarity=-0.077 Sum_probs=29.9
Q ss_pred cceEEEeeCCCCeEEeeCCCCCCcccceEEEE-C-CEEEEEcCcCCCCCccceEEEEeCCCCce
Q psy2980 12 TNRVECYHIAENTWEYKSPMKEKRYRPGIAVI-D-GKIYVLGGEEGWDGYHDSIECYDVDNDSW 73 (92)
Q Consensus 12 ~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~-~~iy~~GG~~~~~~~~~~~~~y~~~~~~W 73 (92)
...+..+|+.+.+....-.. +.....++.. + +.+|+.+.. ...+..+|+.+.+-
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~ 123 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHN--DLKPFGATINNTTQTLWFGNTV------NSAVTAIDAKTGEV 123 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEE--SSCCCSEEEETTTTEEEEEETT------TTEEEEEETTTCCE
T ss_pred CccEEEEcCCCCeEEEEEec--CCCcceEEECCCCCEEEEEecC------CCEEEEEeCCCCee
Confidence 34689999887764322111 1112334443 3 457776543 24788899877653
No 63
>2w2a_A P-coumaric acid decarboxylase; lyase, active site, coumaric acids, decarboxylation, catalyt mechanism; 1.38A {Lactobacillus plantarum} PDB: 2w2b_A 2w2f_A 2gc9_A* 2wsj_A
Probab=34.66 E-value=64 Score=18.22 Aligned_cols=60 Identities=13% Similarity=0.101 Sum_probs=39.4
Q ss_pred EEEeeCCCCeEEeeCCCCCCc----ccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCceEEc
Q psy2980 15 VECYHIAENTWEYKSPMKEKR----YRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIM 76 (92)
Q Consensus 15 v~~yd~~~~~W~~~~~~~~~~----~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~ 76 (92)
.+..|..+-.|.....+..+| ....++.+...||.+-=... .. .+.-..+|+.+..|..+
T Consensus 44 ~~f~ne~tLdyrIh~G~vgGRwv~~Q~~r~t~lR~gIY~VdWlEp-TG-TsVSLV~Dl~~~~~t~V 107 (194)
T 2w2a_A 44 WYAKNDHTVDYRIHGGMVAGRWVTDQKADIVMLTEGIYKISWTEP-TG-TDVALDFMPNEKKLHGT 107 (194)
T ss_dssp EEEEETTEEEEEECSSTTTTCEEEEEECEEEEEETTEEEEEEECT-TS-CEEEEEEEGGGTEEEEE
T ss_pred EEEcCCCeEEEEEecCccCCcccccceEEEEEecCCcEEEEeecC-CC-CEEEEEEECCCCeEEEE
Confidence 455556666788877777778 55667777778888843322 11 44555688888877654
No 64
>2qkl_A DCP1 protein, SPBC3B9.21 protein; protein-protein complex, hydrolase; 2.33A {Schizosaccharomyces pombe} PDB: 2qkm_A*
Probab=34.58 E-value=8.2 Score=20.19 Aligned_cols=17 Identities=24% Similarity=0.513 Sum_probs=8.2
Q ss_pred cceEEEEeCCCCceEEc
Q psy2980 60 HDSIECYDVDNDSWEIM 76 (92)
Q Consensus 60 ~~~~~~y~~~~~~W~~~ 76 (92)
.-.+|.||+.+++|.+.
T Consensus 32 ~v~vY~f~~~~~~W~K~ 48 (127)
T 2qkl_A 32 HVAVYQFDVGSQKWLKT 48 (127)
T ss_dssp EEEEECC------CCEE
T ss_pred eEEEEEecCCCCceEEc
Confidence 45688889999999865
No 65
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=34.47 E-value=30 Score=17.71 Aligned_cols=17 Identities=12% Similarity=0.042 Sum_probs=14.4
Q ss_pred ceEEEeeCCCCeEEeeC
Q psy2980 13 NRVECYHIAENTWEYKS 29 (92)
Q Consensus 13 ~~v~~yd~~~~~W~~~~ 29 (92)
..|+.||+.++.|.+..
T Consensus 11 A~V~~~d~~~~~W~p~~ 27 (118)
T 1xod_A 11 AVVMTRDDSSGGWLQLG 27 (118)
T ss_dssp EEEEEECSSSSCEEEGG
T ss_pred EEEeeEcCCCCCEeeCC
Confidence 46899999999998775
No 66
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=34.14 E-value=1e+02 Score=20.40 Aligned_cols=54 Identities=15% Similarity=0.414 Sum_probs=34.4
Q ss_pred ceEEEeeCCCCe--EEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCc--eEE
Q psy2980 13 NRVECYHIAENT--WEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDS--WEI 75 (92)
Q Consensus 13 ~~v~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~--W~~ 75 (92)
..+..+|+.+.+ |+.-...| .....+++.++.+|+ |.. -..+++||..+.+ |+.
T Consensus 453 G~l~A~D~~tG~~~W~~~~~~~--~~~g~~~tagg~vf~-gt~------dg~l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMERFA--VWGGTMATAGDLVFY-GTL------DGYLKARDSDTGDLLWKF 510 (599)
T ss_dssp EEEEEECTTTCCEEEEEEESSC--CCSBCEEETTTEEEE-ECT------TSEEEEEETTTCCEEEEE
T ss_pred CeEEEEECCCCCEEeEecCCCC--ccCcceEecCCEEEE-ECC------CCeEEEEECCCCCEEEEe
Confidence 468999998774 87643322 223335556777777 432 2468899987764 775
No 67
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=34.09 E-value=80 Score=19.18 Aligned_cols=54 Identities=19% Similarity=0.204 Sum_probs=30.7
Q ss_pred cceEEEeeCCCCeEEeeCCCCCCcccceEEEE-CCE--EEEEcCcCCCCCccceEEEEeCCCCce
Q psy2980 12 TNRVECYHIAENTWEYKSPMKEKRYRPGIAVI-DGK--IYVLGGEEGWDGYHDSIECYDVDNDSW 73 (92)
Q Consensus 12 ~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~--iy~~GG~~~~~~~~~~~~~y~~~~~~W 73 (92)
.++++.+|..+.+- +..++.+....+++.- +++ +|+... ..+++..+|..+.+-
T Consensus 297 ~~~V~VID~~t~~v--v~~i~~g~~p~~i~~s~Dg~~~l~v~~~------~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 297 AKEVTSVTGLVGQT--SSQISLGHDVDAISVAQDGGPDLYALSA------GTEVLHIYDAGAGDQ 353 (373)
T ss_pred CCeEEEEECCCCEE--EEEEECCCCcCeEEECCCCCeEEEEEcC------CCCeEEEEECCCCCE
Confidence 35699999987654 2223333333444443 343 455431 146899999877643
No 68
>2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae}
Probab=33.79 E-value=45 Score=16.24 Aligned_cols=8 Identities=25% Similarity=0.580 Sum_probs=3.4
Q ss_pred EECCEEEE
Q psy2980 42 VIDGKIYV 49 (92)
Q Consensus 42 ~~~~~iy~ 49 (92)
+.++.||+
T Consensus 94 ~~~g~v~v 101 (108)
T 2i7f_A 94 IEDGWVCI 101 (108)
T ss_dssp EETTEEEE
T ss_pred EECCEEEE
Confidence 33444444
No 69
>2de6_D Ferredoxin component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Pseudomonas resinovorans} PDB: 2de5_D 1vck_A 2de7_D*
Probab=33.19 E-value=49 Score=16.45 Aligned_cols=35 Identities=14% Similarity=0.178 Sum_probs=17.0
Q ss_pred EEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEc
Q psy2980 16 ECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLG 51 (92)
Q Consensus 16 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~G 51 (92)
+.||+.+.+-...|.. .+...+.+.+.++.||+..
T Consensus 70 ~~Fdl~tG~~~~~P~~-~~L~~~~v~~~~g~V~v~~ 104 (115)
T 2de6_D 70 GAFNVCTGMPASSPCT-VPLGVFEVEVKEGEVYVAG 104 (115)
T ss_dssp CEEETTTCCEEETTCC-SCCCEEEEEESSSEEEEEE
T ss_pred CEEcCCCcCEeCCCCc-CCCCEEEEEEECCEEEEec
Confidence 5666666665544431 1222233444556666553
No 70
>3nf5_A Nucleoporin NUP116; nuclear pore complex, glebs domain, structural genom 2, protein structure initiative; 1.94A {Candida glabrata}
Probab=32.30 E-value=41 Score=18.46 Aligned_cols=16 Identities=25% Similarity=0.466 Sum_probs=13.5
Q ss_pred ceEEEeeCCCCeEEee
Q psy2980 13 NRVECYHIAENTWEYK 28 (92)
Q Consensus 13 ~~v~~yd~~~~~W~~~ 28 (92)
.++..||+.+..|.-.
T Consensus 136 ~~FvsYd~~tG~W~F~ 151 (164)
T 3nf5_A 136 THFESYDPASGTYCFT 151 (164)
T ss_dssp CEEEEEETTTTEEEEE
T ss_pred CEEEEEeCCCcEEEEE
Confidence 5689999999999554
No 71
>1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A
Probab=32.20 E-value=49 Score=16.20 Aligned_cols=9 Identities=0% Similarity=-0.063 Sum_probs=3.7
Q ss_pred EEeeCCCCe
Q psy2980 16 ECYHIAENT 24 (92)
Q Consensus 16 ~~yd~~~~~ 24 (92)
+.||..|.+
T Consensus 68 ~~Fd~~tG~ 76 (111)
T 1vm9_A 68 WTFNDGTGH 76 (111)
T ss_dssp CEEETTTCB
T ss_pred CEEeCCCcc
Confidence 344444433
No 72
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=31.80 E-value=74 Score=18.14 Aligned_cols=53 Identities=8% Similarity=-0.001 Sum_probs=30.9
Q ss_pred ceEEEeeCCCCeEEeeCCCCCCcccceEEEE-CC-EEEEEcCcCCCCCccceEEEEeCCCCce
Q psy2980 13 NRVECYHIAENTWEYKSPMKEKRYRPGIAVI-DG-KIYVLGGEEGWDGYHDSIECYDVDNDSW 73 (92)
Q Consensus 13 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~-~iy~~GG~~~~~~~~~~~~~y~~~~~~W 73 (92)
..+..||+.+.+....-..+. ....++.. ++ .+|+.+.. ...++.+|+.+.+.
T Consensus 20 ~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~ 74 (331)
T 3u4y_A 20 RRISFFSTDTLEILNQITLGY--DFVDTAITSDCSNVVVTSDF------CQTLVQIETQLEPP 74 (331)
T ss_dssp TEEEEEETTTCCEEEEEECCC--CEEEEEECSSSCEEEEEEST------TCEEEEEECSSSSC
T ss_pred CeEEEEeCcccceeeeEEccC--CcceEEEcCCCCEEEEEeCC------CCeEEEEECCCCce
Confidence 468999999887754433221 11233332 33 47776542 23788888877653
No 73
>2jza_A Nitrite reductase [NAD(P)H] small subunit; ISP domain, rieske iron-sulfur protein, 3-layer beta- sandwich; NMR {Pectobacterium atrosepticum SCRI1043} SCOP: b.33.1.3
Probab=31.30 E-value=49 Score=16.92 Aligned_cols=34 Identities=6% Similarity=0.016 Sum_probs=20.8
Q ss_pred EEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEc
Q psy2980 16 ECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLG 51 (92)
Q Consensus 16 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~G 51 (92)
+.||..+++-...|. .+...+.+.+.++.||+.-
T Consensus 75 ~~Fdl~tG~~~~~P~--~~L~~~~v~v~~g~V~V~~ 108 (130)
T 2jza_A 75 QHFRLYDGFCLEDGA--YSVAAYDTQVTNGNVQISI 108 (130)
T ss_dssp CEEETTTCCBSSCCS--SCCBCCCEEESSSEEEEEC
T ss_pred CEEeCCCcCCCCCCc--CcceEEEEEEECCEEEEEe
Confidence 678887776554443 2233344666678888764
No 74
>1fqt_A Rieske-type ferredoxin of biphenyl dioxygenase; 2Fe-2S cluster, beta sandwich, oxido; 1.60A {Burkholderia xenovorans} SCOP: b.33.1.1 PDB: 2e4q_A 2e4p_A 2yvj_B*
Probab=30.46 E-value=54 Score=16.11 Aligned_cols=34 Identities=15% Similarity=0.093 Sum_probs=20.3
Q ss_pred EEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEE
Q psy2980 16 ECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVL 50 (92)
Q Consensus 16 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~ 50 (92)
+.||+.+.+-...|.. .+...+.+.+.++.||+.
T Consensus 71 ~~Fd~~tG~~~~~P~~-~~L~~~~v~~~~g~v~v~ 104 (112)
T 1fqt_A 71 GKFCVRTGKVKSPPPC-EALKIFPIRIEDNDVLVD 104 (112)
T ss_dssp CEEETTTCCEEESSCC-SCCCBCCEEEETTEEEEC
T ss_pred CEEeCCCCcEeCCCCC-CCccEEEEEEECCEEEEE
Confidence 6788877776665541 223334455667777764
No 75
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=29.76 E-value=82 Score=17.98 Aligned_cols=56 Identities=21% Similarity=0.159 Sum_probs=31.1
Q ss_pred ceEEEeeCCCCeEEeeCCCCCCcccceEEEE-C-CEEEEEcCcCCCCCccceEEEEeCCCCceE
Q psy2980 13 NRVECYHIAENTWEYKSPMKEKRYRPGIAVI-D-GKIYVLGGEEGWDGYHDSIECYDVDNDSWE 74 (92)
Q Consensus 13 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~-~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~ 74 (92)
..+..+|+.+.+....-..+.......++.. + ..+|+.+.. ...+..||+.+.+-.
T Consensus 21 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~------~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 21 NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH------YGDIYGIDLDTCKNT 78 (349)
T ss_dssp TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT------TTEEEEEETTTTEEE
T ss_pred CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC------CCcEEEEeCCCCcEE
Confidence 4689999988875433222221012233333 3 357776532 346888998776543
No 76
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=29.58 E-value=1.1e+02 Score=19.38 Aligned_cols=55 Identities=13% Similarity=0.119 Sum_probs=33.3
Q ss_pred cceEEEeeCCCCeEEeeCCCCCCcccceEEEE--CC-EEEEEcCcCCCCCccceEEEEeCCCCceE
Q psy2980 12 TNRVECYHIAENTWEYKSPMKEKRYRPGIAVI--DG-KIYVLGGEEGWDGYHDSIECYDVDNDSWE 74 (92)
Q Consensus 12 ~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~-~iy~~GG~~~~~~~~~~~~~y~~~~~~W~ 74 (92)
+++|.++|..+.+ .+..++.+....+++.- +. .+|+.... .+++..+|..+.+-.
T Consensus 349 s~~VsVID~~T~k--vv~~I~vg~~P~gia~spDg~~~lyv~n~~------s~~VsVID~~t~kvv 406 (426)
T 3c75_H 349 SRFVVVLNAETGE--RINKIELGHEIDSINVSQDAEPLLYALSAG------TQTLHIYDAATGEEL 406 (426)
T ss_dssp EEEEEEEETTTCC--EEEEEEEEEEECEEEECCSSSCEEEEEETT------TTEEEEEETTTCCEE
T ss_pred CCEEEEEECCCCe--EEEEEECCCCcCeEEEccCCCEEEEEEcCC------CCeEEEEECCCCCEE
Confidence 4569999988765 33344444444444443 33 56766432 568999998776543
No 77
>3kep_A Nucleoporin NUP145; nuclear pore complex, NUP145-N,yeast, autoproteolysi protein maturation, post-translational modification; 1.82A {Saccharomyces cerevisiae} PDB: 3kes_A*
Probab=29.31 E-value=49 Score=18.35 Aligned_cols=16 Identities=25% Similarity=0.480 Sum_probs=13.5
Q ss_pred ceEEEeeCCCCeEEee
Q psy2980 13 NRVECYHIAENTWEYK 28 (92)
Q Consensus 13 ~~v~~yd~~~~~W~~~ 28 (92)
.++..||+.+..|.-.
T Consensus 147 ~~FisYd~~tG~W~F~ 162 (174)
T 3kep_A 147 MNYISYNPFGGTWTFK 162 (174)
T ss_dssp SEEEEEETTTTEEEEE
T ss_pred CEEEEEeCCCcEEEEE
Confidence 5689999999999654
No 78
>3zx7_A Lysenin; toxin, pore forming toxin; HET: PC; 2.84A {Eisenia fetida} PDB: 3zxd_A* 3zxg_A*
Probab=29.26 E-value=8 Score=22.08 Aligned_cols=50 Identities=18% Similarity=0.367 Sum_probs=27.9
Q ss_pred eEEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCceEE
Q psy2980 24 TWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEI 75 (92)
Q Consensus 24 ~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~ 75 (92)
+|..-..||..... ++.+.++.|.-.|..-+..+...+++.|-.+++|-.
T Consensus 243 rwal~kalplrhgd--vvtf~n~~ft~sglcyddgpatnvycldkredkwil 292 (309)
T 3zx7_A 243 RWAINKSLPLRHGD--VVTFMNKYFTRSGLCYDDGPATNVYCLDKREDKWIL 292 (309)
T ss_dssp CEEESSCSSCBTTC--EECEEESSSTTEEEEECCCSSCCEEEEETCCCCEEE
T ss_pred hhhhcccCccccCc--EEEEehhhcccCceeccCCCcceeEeecccCcceEE
Confidence 57666666543322 333333333333322224456778999999999964
No 79
>3pbp_B Nucleoporin NUP116/NSP116; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 2aiv_A
Probab=28.65 E-value=41 Score=18.06 Aligned_cols=17 Identities=18% Similarity=0.458 Sum_probs=13.8
Q ss_pred cceEEEeeCCCCeEEee
Q psy2980 12 TNRVECYHIAENTWEYK 28 (92)
Q Consensus 12 ~~~v~~yd~~~~~W~~~ 28 (92)
-.++.-||+.+..|.-.
T Consensus 124 g~~FvsYd~~tG~W~F~ 140 (148)
T 3pbp_B 124 NSKFESYDADSGTYVFI 140 (148)
T ss_dssp SSEEEEECTTTCCEEEE
T ss_pred CCEEEEEeCCCcEEEEE
Confidence 35689999999999654
No 80
>4aay_B AROB; oxidoreductase, rieske, iron sulfur, molybdopterin; HET: MGD; 2.70A {Rhizobium species}
Probab=28.26 E-value=79 Score=17.33 Aligned_cols=35 Identities=11% Similarity=0.174 Sum_probs=19.6
Q ss_pred EEeeCC-CCeEEeeCCCCCCcccceEEE-ECCEEEEEc
Q psy2980 16 ECYHIA-ENTWEYKSPMKEKRYRPGIAV-IDGKIYVLG 51 (92)
Q Consensus 16 ~~yd~~-~~~W~~~~~~~~~~~~~~~~~-~~~~iy~~G 51 (92)
+.||+. +.+-...|. +.+...+.+.+ -++.||+.|
T Consensus 126 ~~Fd~~~tG~~~~gPa-~~~L~~y~v~vd~dG~V~avg 162 (175)
T 4aay_B 126 SVFDPEKGGQQVWGQA-TQNLPQYVLRVADNGDIFAEG 162 (175)
T ss_dssp CEEEGGGTTEEEECSC-SSCCCBEEEEECTTSEEEEEE
T ss_pred CEECCCCCceEecCCC-CCCcCEEEEEEEcCCEEEEEE
Confidence 667776 676665554 22233333444 367788776
No 81
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=27.98 E-value=1.2e+02 Score=19.46 Aligned_cols=50 Identities=14% Similarity=0.114 Sum_probs=29.3
Q ss_pred ceEEEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCC
Q psy2980 13 NRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDND 71 (92)
Q Consensus 13 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~ 71 (92)
+..|+||..+++.....=...+.. -++....+.+|+|-|. ..++||+.+.
T Consensus 167 ~~yw~yd~~~~~~~~~~w~gi~~i-DAA~~~~g~~YfFkG~--------~y~rfd~~~~ 216 (460)
T 1qhu_A 167 NRKWFWDLTTGTKKERSWPAVGNC-TSALRWLGRYYCFQGN--------QFLRFNPVSG 216 (460)
T ss_dssp TEEEEEETTTTEEEEECCTTSCCC-SEEEEETTEEEEEETT--------EEEEECTTTC
T ss_pred ccEEEEecccceeecccCCCCCcc-chheeeCCceEEEECC--------EEEEEcCccC
Confidence 357889988776543211111222 3344457899999753 4677877554
No 82
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=27.62 E-value=1.2e+02 Score=18.99 Aligned_cols=56 Identities=13% Similarity=0.061 Sum_probs=34.0
Q ss_pred cceEEEeeCCCCeEEeeCCCCCCcccceEEE-ECC--EEEEEcCcCCCCCccceEEEEeCCCCceEE
Q psy2980 12 TNRVECYHIAENTWEYKSPMKEKRYRPGIAV-IDG--KIYVLGGEEGWDGYHDSIECYDVDNDSWEI 75 (92)
Q Consensus 12 ~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~--~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~ 75 (92)
.++|+.+|+.+.+- +..++.+....+++. -++ .+|+..+. .+++..+|..+.+-..
T Consensus 310 ~~~V~viD~~t~kv--~~~i~vg~~~~~lavs~D~~~~ly~tn~~------~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 310 SRFVVVLDAKTGER--LAKFEMGHEIDSINVSQDEKPLLYALSTG------DKTLYIHDAESGEELR 368 (386)
T ss_dssp EEEEEEEETTTCCE--EEEEEEEEEECEEEECSSSSCEEEEEETT------TTEEEEEETTTCCEEE
T ss_pred CCEEEEEECCCCeE--EEEEECCCCcceEEECCCCCeEEEEEcCC------CCeEEEEECCCCcEEE
Confidence 46799999998764 223333333334444 343 46775432 4688999998876543
No 83
>2q5x_A Nuclear pore complex protein NUP98; nucleoporin, autoproteolysis, precursor, protein transport; 1.90A {Homo sapiens} PDB: 2q5y_A 3tkn_C
Probab=27.40 E-value=56 Score=17.68 Aligned_cols=16 Identities=19% Similarity=0.578 Sum_probs=13.3
Q ss_pred ceEEEeeCCCCeEEee
Q psy2980 13 NRVECYHIAENTWEYK 28 (92)
Q Consensus 13 ~~v~~yd~~~~~W~~~ 28 (92)
.++.-||+.+.+|.-.
T Consensus 129 ~~FvsYd~~tG~W~F~ 144 (155)
T 2q5x_A 129 AQFKEYRPETGSWVFK 144 (155)
T ss_dssp CEEEEEETTTTEEEEE
T ss_pred CEEEEEeCCCcEEEEE
Confidence 4688999999999654
No 84
>2b4w_A Hypothetical protein, conserved; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.98A {Leishmania major} SCOP: b.67.2.5
Probab=26.75 E-value=1.1e+02 Score=18.63 Aligned_cols=40 Identities=18% Similarity=0.314 Sum_probs=29.1
Q ss_pred ceEEEeeC-CCCeEEeeCCCCCCcccceEEEECCEEEEEcCc
Q psy2980 13 NRVECYHI-AENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGE 53 (92)
Q Consensus 13 ~~v~~yd~-~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~ 53 (92)
+.|..|.- ..++|..++.+.......-.+.+++.++ +||.
T Consensus 58 S~V~fFeet~~d~w~~v~~~~~~LqDPF~t~I~gEli-~GGv 98 (315)
T 2b4w_A 58 SHVRLFEETGKDEFTAVPELSWELEDPYIAKINNEMI-FGGT 98 (315)
T ss_dssp CEEEEEEEEETTEEEECTTCCBSCEEEEEEEETTEEE-EEEE
T ss_pred cEEEEEEEcCCCceEECCCCEEEecCccEEEECCEEE-eeeE
Confidence 56777765 7889999988444556666788899884 4553
No 85
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=25.89 E-value=1.1e+02 Score=18.09 Aligned_cols=53 Identities=15% Similarity=0.272 Sum_probs=31.8
Q ss_pred eEEEeeCCCCe--EEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCc--eEE
Q psy2980 14 RVECYHIAENT--WEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDS--WEI 75 (92)
Q Consensus 14 ~v~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~--W~~ 75 (92)
.+.+||+.+.+ |..-. ++ .......+..++.||+... ...++++|+.+.+ |+.
T Consensus 288 ~l~~~d~~tG~~~w~~~~-~~-~~~~~~~~~~~~~l~v~~~-------~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 288 RVMALTIDGGVTLWTQSD-LL-HRLLTSPVLYNGNLVVGDS-------EGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp CEEEEETTTCCEEEEECT-TT-TSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEE
T ss_pred eEEEEECCCCcEEEeecc-cC-CCcccCCEEECCEEEEEeC-------CCeEEEEECCCCcEEEEE
Confidence 48888887764 65431 11 1222334556788877631 2468899987764 654
No 86
>1g8k_B Arsenite oxidase; molybdopterin, [3Fe-4S] cluster, [2Fe-2S] rieske, oxidoreductase; HET: MGD; 1.64A {Alcaligenes faecalis} SCOP: b.33.1.1 PDB: 1g8j_B*
Probab=24.41 E-value=82 Score=16.19 Aligned_cols=35 Identities=6% Similarity=-0.017 Sum_probs=16.8
Q ss_pred EEeeCC-CCeEEeeCCCCCCcccceEEEE--CCEEEEEc
Q psy2980 16 ECYHIA-ENTWEYKSPMKEKRYRPGIAVI--DGKIYVLG 51 (92)
Q Consensus 16 ~~yd~~-~~~W~~~~~~~~~~~~~~~~~~--~~~iy~~G 51 (92)
+.||+. +.+-...|. +.+...+.+.+. ++.||+.|
T Consensus 83 ~~Fd~~~~G~~~~gP~-~~~L~~~~v~v~~~g~~V~v~g 120 (133)
T 1g8k_B 83 TEFDAEKAGQMICGEA-TADLPRVLLRYDAASDALTAVG 120 (133)
T ss_dssp CEEEGGGTTEEEESSC-SSCCCEEEEEEETTTTEEEEEE
T ss_pred CEECCCCCCCEEcCCC-CCCCCEEEEEEECCCCEEEEEe
Confidence 566665 565544432 122223334444 45677765
No 87
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=24.15 E-value=1.6e+02 Score=19.61 Aligned_cols=54 Identities=7% Similarity=0.139 Sum_probs=30.8
Q ss_pred eEEEeeCCCCeEEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCCceEEc
Q psy2980 14 RVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIM 76 (92)
Q Consensus 14 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~ 76 (92)
-+.+||+.++++....... ...-..++..++.|++.. .+.+++||+.+++.+..
T Consensus 83 Gl~~yd~~~~~f~~~~~~~-~~~i~~i~~~~g~lWigt--------~~Gl~~~~~~~~~~~~~ 136 (758)
T 3ott_A 83 GILVYNYRADRYEQPETDF-PTDVRTMALQGDTLWLGA--------LNGLYTYQLQSRKLTSF 136 (758)
T ss_dssp EEEEEETTTTEECCCSCCC-CSCEEEEEEETTEEEEEE--------TTEEEEEETTTCCEEEE
T ss_pred CeEEEeCCCCEEECcccCC-CceEEEEEecCCcEEEEc--------CCcceeEeCCCCeEEEe
Confidence 3688999988876521111 111112333467777742 22578888877776654
No 88
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=24.13 E-value=1.5e+02 Score=19.26 Aligned_cols=55 Identities=7% Similarity=0.311 Sum_probs=33.2
Q ss_pred ceEEEeeCCCCe--EEeeCCCCCCcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCC--ceEEc
Q psy2980 13 NRVECYHIAENT--WEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDND--SWEIM 76 (92)
Q Consensus 13 ~~v~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~--~W~~~ 76 (92)
..+.++|+.+.+ |+.-... +.....+++.++.+|+ |.. -..++++|..+. .|+.-
T Consensus 444 g~l~a~D~~tG~~~W~~~~~~--~~~~~~~~t~gg~v~~-g~~------dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 444 GQIRAFDLTTGKAKWTKWEKF--AAWGGTLYTKGGLVWY-ATL------DGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp EEEEEECTTTCCEEEEEEESS--CCCSBCEEETTTEEEE-ECT------TSEEEEEETTTCCEEEEEE
T ss_pred CeEEEEECCCCCEEEEecCCC--CccceeEEECCCEEEE-EcC------CCeEEEEECCCCCEEEEEe
Confidence 579999998764 8654322 1222234445777777 432 247889998765 47653
No 89
>3ijm_A Uncharacterized restriction endonuclease-like FOL superfamily protein; DUF820, cyanobacteria, PD(D/E)XK superfamily, structural GEN PSI-2; 1.70A {Spirosoma linguale}
Probab=23.65 E-value=85 Score=16.78 Aligned_cols=18 Identities=6% Similarity=0.052 Sum_probs=14.3
Q ss_pred cceEEEeeCCCCeEEeeC
Q psy2980 12 TNRVECYHIAENTWEYKS 29 (92)
Q Consensus 12 ~~~v~~yd~~~~~W~~~~ 29 (92)
.-+-++||-+++.|.+-.
T Consensus 110 I~EGFVynYkt~~W~rYr 127 (151)
T 3ijm_A 110 ILEGFVFNYKTQQWLRYR 127 (151)
T ss_dssp CCEEEEEETTTTEEEEEE
T ss_pred ceeeeeEeeccCceeEEE
Confidence 346789999999997763
No 90
>3nff_A RNA polymerase I subunit A49; tripple barrel, transcription, dimerization; 3.24A {Candida glabrata}
Probab=23.52 E-value=88 Score=16.27 Aligned_cols=16 Identities=13% Similarity=0.102 Sum_probs=13.6
Q ss_pred EEEeeCCCCeEEeeCC
Q psy2980 15 VECYHIAENTWEYKSP 30 (92)
Q Consensus 15 v~~yd~~~~~W~~~~~ 30 (92)
|-.||+.+++|+-.+.
T Consensus 76 VgVyDP~T~~leL~~A 91 (122)
T 3nff_A 76 VGLYDKQSGKINLYRA 91 (122)
T ss_dssp EEEEETTTTEEEEEEC
T ss_pred EEEEcCCCCeEEEEEc
Confidence 6789999999988865
No 91
>3nfg_A DNA-directed RNA polymerase I subunit RPA49; triple barrel, transcription, dimerization; 2.51A {Candida glabrata}
Probab=23.25 E-value=77 Score=15.89 Aligned_cols=16 Identities=13% Similarity=0.102 Sum_probs=13.3
Q ss_pred EEEeeCCCCeEEeeCC
Q psy2980 15 VECYHIAENTWEYKSP 30 (92)
Q Consensus 15 v~~yd~~~~~W~~~~~ 30 (92)
|-.||+.+++|+-.+.
T Consensus 76 VgVyDp~t~~lel~~A 91 (102)
T 3nfg_A 76 VGLYDKQSGKINLYRA 91 (102)
T ss_dssp EEEEETTTTEEEEEEE
T ss_pred EEEEcCCCCeEEEEEe
Confidence 6789999999988764
No 92
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=22.72 E-value=49 Score=17.19 Aligned_cols=18 Identities=11% Similarity=0.027 Sum_probs=14.5
Q ss_pred ceEEEeeCCCCeEEeeCC
Q psy2980 13 NRVECYHIAENTWEYKSP 30 (92)
Q Consensus 13 ~~v~~yd~~~~~W~~~~~ 30 (92)
..|+.||+.++.|.+...
T Consensus 20 A~Vm~~D~~~~~W~p~~~ 37 (126)
T 2jp2_A 20 AVVMTRDDSSGGWFPQEG 37 (126)
T ss_dssp EEEEEECTTSSSSEECSC
T ss_pred EEEeeEcCCCCCEeeCCC
Confidence 468999999999987653
No 93
>2crf_A RAN binding protein 3; RAN_BP1 domain, ranbp3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=22.53 E-value=79 Score=16.88 Aligned_cols=17 Identities=18% Similarity=0.335 Sum_probs=12.9
Q ss_pred cceEEEEeCCCCceEEc
Q psy2980 60 HDSIECYDVDNDSWEIM 76 (92)
Q Consensus 60 ~~~~~~y~~~~~~W~~~ 76 (92)
...+++||..++.|+..
T Consensus 33 raKL~~fd~~~~~WkER 49 (150)
T 2crf_A 33 QCKLFVFDKTSQSWVER 49 (150)
T ss_dssp EEEEEEEETTTTEEEEE
T ss_pred EeEEEEEcCCCCCcccc
Confidence 34677888888899865
No 94
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=22.16 E-value=1.2e+02 Score=17.15 Aligned_cols=55 Identities=13% Similarity=0.177 Sum_probs=29.4
Q ss_pred ceEEEeeCCCCeEEeeCCCCCCcccceEEE-ECCEEEEEcCcCCCCCccceEEEEeCCCCceEEc
Q psy2980 13 NRVECYHIAENTWEYKSPMKEKRYRPGIAV-IDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIM 76 (92)
Q Consensus 13 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~ 76 (92)
..+.+||+.+. ...... +... -.+++. -++.+|+.... ...+..||+.+.+.+.+
T Consensus 50 ~~i~~~~~~~~-~~~~~~-~~~~-~~~l~~~~dg~l~v~~~~------~~~i~~~d~~~g~~~~~ 105 (296)
T 3e5z_A 50 NRTWAWSDDGQ-LSPEMH-PSHH-QNGHCLNKQGHLIACSHG------LRRLERQREPGGEWESI 105 (296)
T ss_dssp TEEEEEETTSC-EEEEES-SCSS-EEEEEECTTCCEEEEETT------TTEEEEECSTTCCEEEE
T ss_pred CEEEEEECCCC-eEEEEC-CCCC-cceeeECCCCcEEEEecC------CCeEEEEcCCCCcEEEE
Confidence 35788888776 544432 1111 122333 24567665421 24678888877666544
No 95
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=21.99 E-value=1.2e+02 Score=17.22 Aligned_cols=25 Identities=16% Similarity=0.387 Sum_probs=14.7
Q ss_pred CEEEEEcCcCCCCCccceEEEEeCCCCceEE
Q psy2980 45 GKIYVLGGEEGWDGYHDSIECYDVDNDSWEI 75 (92)
Q Consensus 45 ~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~ 75 (92)
+.+++.|+.+ ..+..||..+..|..
T Consensus 67 g~~l~s~s~D------~~v~iWd~~~~~~~~ 91 (297)
T 2pm7_B 67 GTILASCSYD------GKVMIWKEENGRWSQ 91 (297)
T ss_dssp CSEEEEEETT------TEEEEEEBSSSCBCC
T ss_pred CCEEEEEcCC------CEEEEEEcCCCceEE
Confidence 4455666543 356777776665543
No 96
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=21.56 E-value=1.3e+02 Score=17.29 Aligned_cols=59 Identities=12% Similarity=0.050 Sum_probs=30.9
Q ss_pred ceEEEeeCCCCeEEeeCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccceEEEEeCCCCceE
Q psy2980 13 NRVECYHIAENTWEYKSPMKEKRYRPGIAVI-DGKIYVLGGEEGWDGYHDSIECYDVDNDSWE 74 (92)
Q Consensus 13 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~ 74 (92)
..+.+||+.+.+...+...+ ...-.+++.- ++.+|+..... ......++.||+.+....
T Consensus 66 ~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~--~~~~~~i~~~d~~~~~~~ 125 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGD--FKSTGGIFAATENGDNLQ 125 (333)
T ss_dssp CEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTT--SSSCCEEEEECTTSCSCE
T ss_pred CEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCC--CCCCceEEEEeCCCCEEE
Confidence 35888888877766543111 1111223332 45677764321 011246888888776554
No 97
>3n7c_A ABR034WP; nuclear pore complex, NUP2, RAN-binding domain, nucleoporin, structural genomics, PSI-2, protein structure initiative; 2.26A {Ashbya gossypii} PDB: 3oan_A
Probab=21.21 E-value=65 Score=16.76 Aligned_cols=17 Identities=12% Similarity=0.290 Sum_probs=10.4
Q ss_pred cceEEEEeCCCCceEEc
Q psy2980 60 HDSIECYDVDNDSWEIM 76 (92)
Q Consensus 60 ~~~~~~y~~~~~~W~~~ 76 (92)
...++.||..++.|+..
T Consensus 17 raKL~~f~~~~~~Wker 33 (130)
T 3n7c_A 17 KAKLLIFDSDTKGYTSR 33 (130)
T ss_dssp EEEEEEECC---CEEEE
T ss_pred EEEEEEEeCCCCCchhc
Confidence 45678888888889865
No 98
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=21.02 E-value=2e+02 Score=19.34 Aligned_cols=56 Identities=14% Similarity=0.160 Sum_probs=33.0
Q ss_pred eEEEeeCCCCeEEeeCCCCC---Cccc-ceEEE-ECCEEEEEcCcCCCCCccceEEEEeCCCCceEEc
Q psy2980 14 RVECYHIAENTWEYKSPMKE---KRYR-PGIAV-IDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIM 76 (92)
Q Consensus 14 ~v~~yd~~~~~W~~~~~~~~---~~~~-~~~~~-~~~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~~~ 76 (92)
-+.+||+.++++......+. +... .+++. .++.||+.. . ...+.+||+.+.+++..
T Consensus 138 gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt-~------~~Gl~~~~~~~~~~~~~ 198 (781)
T 3v9f_A 138 GIEYLDIATGKFTHYNKSTVPALPSEQTWTATEAEDGKLYIGH-V------EGGLSILSLNDKSVKHF 198 (781)
T ss_dssp CEEEEETTTTEEEEESTTTCTTCSCCCEEEEEEEETTEEEEEE-T------TTEEEEEETTTTEEEEE
T ss_pred CeeEEECCCCeEEeeccCcccCCCccceEEEEECCCCCEEEEe-c------CCCeEEEcCCCCceEee
Confidence 47889998888877753211 1111 12222 367788742 1 12578888888777654
No 99
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=20.83 E-value=1.2e+02 Score=17.00 Aligned_cols=52 Identities=13% Similarity=0.275 Sum_probs=24.1
Q ss_pred eEEEeeCCCCeEEeeCCCCCCcccceEEEE-CCEEEEEcCcCCCCCccceEEEEeCCCCc
Q psy2980 14 RVECYHIAENTWEYKSPMKEKRYRPGIAVI-DGKIYVLGGEEGWDGYHDSIECYDVDNDS 72 (92)
Q Consensus 14 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~iy~~GG~~~~~~~~~~~~~y~~~~~~ 72 (92)
.+..||..+.+....-....... ..++.. ++..++.++.+ ..+..||..+.+
T Consensus 164 ~v~~~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~ 216 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQGHTDGA-SCIDISNDGTKLWTGGLD------NTVRSWDLREGR 216 (337)
T ss_dssp CEEEEETTTTEEEEEECCCSSCE-EEEEECTTSSEEEEEETT------SEEEEEETTTTE
T ss_pred cEEEEeCCCCceeeeeecccCce-EEEEECCCCCEEEEEecC------CcEEEEECCCCc
Confidence 47788877765432211111111 112222 34455555432 357777776554
No 100
>4fmw_A RNA (guanine-9-)-methyltransferase domain-contain protein 2; structural genomics, structural genomics consortium, SGC, RN modification; HET: SAH; 2.00A {Homo sapiens}
Probab=20.60 E-value=32 Score=19.36 Aligned_cols=11 Identities=45% Similarity=0.848 Sum_probs=8.9
Q ss_pred CCEEEEEcCcC
Q psy2980 44 DGKIYVLGGEE 54 (92)
Q Consensus 44 ~~~iy~~GG~~ 54 (92)
.+.+|++||.=
T Consensus 119 ~~~vYIIGGiV 129 (197)
T 4fmw_A 119 ESKAYVIGGLV 129 (197)
T ss_dssp TTSEEEEECCC
T ss_pred CCCEEEEEEEE
Confidence 46799999973
No 101
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=20.45 E-value=1.3e+02 Score=17.22 Aligned_cols=24 Identities=21% Similarity=0.483 Sum_probs=13.4
Q ss_pred CEEEEEcCcCCCCCccceEEEEeCCCCceE
Q psy2980 45 GKIYVLGGEEGWDGYHDSIECYDVDNDSWE 74 (92)
Q Consensus 45 ~~iy~~GG~~~~~~~~~~~~~y~~~~~~W~ 74 (92)
+.+++.|+.+ ..+..||..+..|+
T Consensus 71 ~~~l~s~s~D------~~v~iWd~~~~~~~ 94 (316)
T 3bg1_A 71 GNILASCSYD------RKVIIWREENGTWE 94 (316)
T ss_dssp SSCEEEEETT------SCEEEECCSSSCCC
T ss_pred CCEEEEEECC------CEEEEEECCCCcce
Confidence 3455555543 25666777665554
No 102
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=20.27 E-value=2e+02 Score=19.15 Aligned_cols=63 Identities=17% Similarity=0.377 Sum_probs=37.7
Q ss_pred ceEEEeeCCCCe--EEeeCCCCC--CcccceEEEECCEEEEEcCcCCCCCccceEEEEeCCCC--ceEEc
Q psy2980 13 NRVECYHIAENT--WEYKSPMKE--KRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDND--SWEIM 76 (92)
Q Consensus 13 ~~v~~yd~~~~~--W~~~~~~~~--~~~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~y~~~~~--~W~~~ 76 (92)
..+.++|..+.+ |+.-..-+. .....+.++.++.+|+..+... ......++.||..+. .|+.-
T Consensus 127 g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~-~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 127 GRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAE-YGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp SEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCC-cCCCCEEEEEECCCCcEEEEec
Confidence 468999988774 876542111 1223345567888877433211 223568999999765 48754
No 103
>1rrp_B Nuclear pore complex protein NUP358; complex (small GTPase/nuclear protein), small GTPase, nuclear transport; HET: GNP; 2.96A {Homo sapiens} SCOP: b.55.1.3
Probab=20.12 E-value=80 Score=16.38 Aligned_cols=17 Identities=18% Similarity=0.503 Sum_probs=12.0
Q ss_pred cceEEEEeCCCCceEEc
Q psy2980 60 HDSIECYDVDNDSWEIM 76 (92)
Q Consensus 60 ~~~~~~y~~~~~~W~~~ 76 (92)
...+++||..++.|+..
T Consensus 28 raKL~~~~~~~~~Wker 44 (134)
T 1rrp_B 28 RAKLFRFDVESKEWKER 44 (134)
T ss_dssp EEEEEEECSSSSCEEEE
T ss_pred EEEEEEEcccCCCcccC
Confidence 34677777777888764
Done!