RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy2980
         (92 letters)



>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1,
           KEAP1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 288

 Score = 58.0 bits (138), Expect = 3e-12
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 1/86 (1%)

Query: 4   GWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSI 63
           G +   +  N VE Y +   TW + +PMK +R   GI V  G+IYVLGG +G   + DS+
Sbjct: 202 GGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHT-FLDSV 260

Query: 64  ECYDVDNDSWEIMSHLPSARSWLGCV 89
           ECYD D D+W  ++ + S RS +G  
Sbjct: 261 ECYDPDTDTWSEVTRMTSGRSGVGVA 286



 Score = 40.7 bits (93), Expect = 5e-06
 Identities = 13/69 (18%), Positives = 26/69 (37%)

Query: 10 ENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVD 69
          ++ + +E Y+ +  TW   + ++  R      V+ G +Y +GG       +      D  
Sbjct: 16 QSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCY 75

Query: 70 NDSWEIMSH 78
          N      S 
Sbjct: 76 NPMTNQWSP 84



 Score = 33.0 bits (73), Expect = 0.003
 Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 2/50 (4%)

Query: 43 IDGKIYVLGGEEGWDGYHDSIECYDVDNDSWEIMSHLPSARSWLGCVPLQ 92
          +   IY  GG          +E Y+  N +W  ++ L   RS L    + 
Sbjct: 3  VGRLIYTAGGYFR--QSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVG 50



 Score = 30.6 bits (67), Expect = 0.016
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 4   GWHASTENTNRVECYHIAENTWEYKSPMKEKRYRPGIAV 42
           G +      + VECY    +TW   + M   R   G+AV
Sbjct: 249 GGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAV 287


>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain
           {Fungi (Fusarium sp.) [TaxId: 29916]}
          Length = 387

 Score = 47.9 bits (112), Expect = 2e-08
 Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 4/64 (6%)

Query: 8   STENTNRVECYHIAENTWEYKSPMKEKRYRPGIAVI--DGKIYVLGGEEGWDGY--HDSI 63
            +      E Y   ++T+  ++P    R    I+++  DG+++  GG    D    H   
Sbjct: 316 DSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTNHFDA 375

Query: 64  ECYD 67
           + + 
Sbjct: 376 QIFT 379



 Score = 38.3 bits (87), Expect = 4e-05
 Identities = 12/94 (12%), Positives = 32/94 (34%), Gaps = 6/94 (6%)

Query: 4   GWHASTENTNRVECYHIAENTWEYKSPM-KEKRYRPGIAVIDGKIYVLGGEEGWDGYHD- 61
               +  +   +     + NT    + +   + +   + + DG  ++ GG+     + D 
Sbjct: 258 SDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDS 317

Query: 62  ----SIECYDVDNDSWEIMSHLPSARSWLGCVPL 91
               + E Y  + D++   +     R +     L
Sbjct: 318 TPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLL 351



 Score = 37.9 bits (86), Expect = 4e-05
 Identities = 6/69 (8%), Positives = 13/69 (18%), Gaps = 5/69 (7%)

Query: 21 AENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGE-----EGWDGYHDSIECYDVDNDSWEI 75
              W     +        I    G++ +          G  G       +D        
Sbjct: 7  GLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSD 66

Query: 76 MSHLPSARS 84
           +   +   
Sbjct: 67 RTVTVTKHD 75



 Score = 32.1 bits (71), Expect = 0.005
 Identities = 14/90 (15%), Positives = 25/90 (27%), Gaps = 8/90 (8%)

Query: 4   GWHASTENTNRVECYHIAENTWEYKSPMKEKRYRP---GIAVIDGKIYVLGGEEGWDGYH 60
            +  S         +  +      ++    K            +G+I V GG +      
Sbjct: 43  AFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA----- 97

Query: 61  DSIECYDVDNDSWEIMSHLPSARSWLGCVP 90
                YD  +DSW     +  AR +     
Sbjct: 98  KKTSLYDSSSDSWIPGPDMQVARGYQSSAT 127



 Score = 27.5 bits (59), Expect = 0.23
 Identities = 12/92 (13%), Positives = 21/92 (22%), Gaps = 8/92 (8%)

Query: 5   WHASTENTNRVECYHIAENTWEYKSPMKEKRYRP----GIAVIDGKIYVLGGEEGW---- 56
             +        E Y  +  TW      K          G+   D   ++ G ++G     
Sbjct: 139 SWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQA 198

Query: 57  DGYHDSIECYDVDNDSWEIMSHLPSARSWLGC 88
                    Y   +   +      S R     
Sbjct: 199 GPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPD 230


>d1v0wa1 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces sp.
           [TaxId: 1931]}
          Length = 258

 Score = 24.3 bits (52), Expect = 2.4
 Identities = 7/23 (30%), Positives = 11/23 (47%)

Query: 40  IAVIDGKIYVLGGEEGWDGYHDS 62
           I V+DG+  + GG   W   +  
Sbjct: 168 ILVVDGQSALTGGINSWKDDYLD 190


>d1p49a_ c.76.1.2 (A:) Steryl-sulfatase {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 553

 Score = 23.6 bits (49), Expect = 5.6
 Identities = 10/57 (17%), Positives = 21/57 (36%)

Query: 18  YHIAENTWEYKSPMKEKRYRPGIAVIDGKIYVLGGEEGWDGYHDSIECYDVDNDSWE 74
           +H   +T  +K+      + P  +      +V      +  +HD    +D+  D  E
Sbjct: 433 WHPQNSTSIWKAFFFTPNFNPVGSNGCFATHVCFCFGSYVTHHDPPLLFDISKDPRE 489


>d1gena_ b.66.1.1 (A:) Gelatinase A (MMP-2), C-terminal domain
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 200

 Score = 22.8 bits (48), Expect = 9.8
 Identities = 6/23 (26%), Positives = 10/23 (43%)

Query: 66  YDVDNDSWEIMSHLPSARSWLGC 88
             ++N S + +        WLGC
Sbjct: 178 LKLENQSLKSVKFGSIKSDWLGC 200


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.136    0.465 

Gapped
Lambda     K      H
   0.267   0.0484    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 405,071
Number of extensions: 17202
Number of successful extensions: 65
Number of sequences better than 10.0: 1
Number of HSP's gapped: 61
Number of HSP's successfully gapped: 22
Length of query: 92
Length of database: 2,407,596
Length adjustment: 56
Effective length of query: 36
Effective length of database: 1,638,716
Effective search space: 58993776
Effective search space used: 58993776
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.5 bits)