BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2982
(443 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q91VC9|GHITM_MOUSE Growth hormone-inducible transmembrane protein OS=Mus musculus
GN=Ghitm PE=2 SV=1
Length = 346
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/146 (57%), Positives = 110/146 (75%)
Query: 1 LWPQYVRDRITSTYAYFGGSIVLSAASAYAVFTSPTMLRLVSGNSMLAMFGSIALLMGSG 60
+WPQYV+DRI STY Y GSI L+A SA AV +P ++ + S + + + A ++G+G
Sbjct: 116 IWPQYVKDRIHSTYMYLAGSIGLTALSALAVARTPALMNFMMTGSWVTIGATFAAMIGAG 175
Query: 61 MLVQSLEYKPGFGAKQIAWALHSALVGAVVAPICFIGGPVLIRAAWYTAGIVGGLSTVAA 120
MLV S+ Y+ G K +AW LHS ++GAVVAP+ +GGP+L+RAAWYTAGIVGGLSTVA
Sbjct: 176 MLVHSISYEQSPGPKHLAWMLHSGVMGAVVAPLTILGGPLLLRAAWYTAGIVGGLSTVAM 235
Query: 121 CAPSDKFLTMGGPLAIGLGVVFASSI 146
CAPS+KFL MG PL +GLG+VFASS+
Sbjct: 236 CAPSEKFLNMGAPLGVGLGLVFASSL 261
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 105/186 (56%), Gaps = 30/186 (16%)
Query: 260 LTMFGSIALLMGSGMLVQSLEYKPGFGAKQIAWALHSALVGAVVAPICFIGGPVLIRAAW 319
+T+ + A ++G+GMLV S+ Y+ G K +AW LHS ++GAVVAP+ +GGP+L+RAAW
Sbjct: 162 VTIGATFAAMIGAGMLVHSISYEQSPGPKHLAWMLHSGVMGAVVAPLTILGGPLLLRAAW 221
Query: 320 YTAGIVGAFKIGQGAVAGGAVLGLGALCYYGLGLSSERGAQEVQYWDWVHYVTMDWDYLV 379
YTAGIVG L +GA GLGL
Sbjct: 222 YTAGIVGGLSTVAMCAPSEKFLNMGAPLGVGLGLVFASS--------------------- 260
Query: 380 NEELWIMLRSAFLPPTTALGAGLYSITLYGGLLLFSGFLLYDTQKIITRAERTPPY--VT 437
L S FLPPT+ GA LYS+ +YGGL+LFS FLLYDTQK+I RAE TP Y
Sbjct: 261 -------LGSMFLPPTSVAGATLYSVAMYGGLVLFSMFLLYDTQKVIKRAEITPMYGAQK 313
Query: 438 YDPVNA 443
YDP+N+
Sbjct: 314 YDPINS 319
>sp|Q9H3K2|GHITM_HUMAN Growth hormone-inducible transmembrane protein OS=Homo sapiens
GN=GHITM PE=1 SV=2
Length = 345
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/146 (56%), Positives = 109/146 (74%)
Query: 1 LWPQYVRDRITSTYAYFGGSIVLSAASAYAVFTSPTMLRLVSGNSMLAMFGSIALLMGSG 60
+WPQYV+DRI STY Y GSI L+A SA A+ +P ++ + S + + + A ++G+G
Sbjct: 115 IWPQYVKDRIHSTYMYLAGSIGLTALSAIAISRTPVLMNFMMRGSWVTIGVTFAAMVGAG 174
Query: 61 MLVQSLEYKPGFGAKQIAWALHSALVGAVVAPICFIGGPVLIRAAWYTAGIVGGLSTVAA 120
MLV+S+ Y G K +AW LHS ++GAVVAP+ +GGP+LIRAAWYTAGIVGGLSTVA
Sbjct: 175 MLVRSIPYDQSPGPKHLAWLLHSGVMGAVVAPLTILGGPLLIRAAWYTAGIVGGLSTVAM 234
Query: 121 CAPSDKFLTMGGPLAIGLGVVFASSI 146
CAPS+KFL MG PL +GLG+VF SS+
Sbjct: 235 CAPSEKFLNMGAPLGVGLGLVFVSSL 260
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 109/195 (55%), Gaps = 37/195 (18%)
Query: 258 LNLTMFGS-------IALLMGSGMLVQSLEYKPGFGAKQIAWALHSALVGAVVAPICFIG 310
+N M GS A ++G+GMLV+S+ Y G K +AW LHS ++GAVVAP+ +G
Sbjct: 152 MNFMMRGSWVTIGVTFAAMVGAGMLVRSIPYDQSPGPKHLAWLLHSGVMGAVVAPLTILG 211
Query: 311 GPVLIRAAWYTAGIVGAFKIGQGAVAGGAVLGLGALCYYGLGLSSERGAQEVQYWDWVHY 370
GP+LIRAAWYTAGIVG L +GA GLGL +
Sbjct: 212 GPLLIRAAWYTAGIVGGLSTVAMCAPSEKFLNMGAPLGVGLGLV---------------F 256
Query: 371 VTMDWDYLVNEELWIMLRSAFLPPTTALGAGLYSITLYGGLLLFSGFLLYDTQKIITRAE 430
V+ L S FLPPTT GA LYS+ +YGGL+LFS FLLYDTQK+I RAE
Sbjct: 257 VS-------------SLGSMFLPPTTVAGATLYSVAMYGGLVLFSMFLLYDTQKVIKRAE 303
Query: 431 RTPPY--VTYDPVNA 443
+P Y YDP+N+
Sbjct: 304 VSPMYGVQKYDPINS 318
>sp|Q5XIA8|GHITM_RAT Growth hormone-inducible transmembrane protein OS=Rattus norvegicus
GN=Ghitm PE=2 SV=1
Length = 346
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/146 (58%), Positives = 111/146 (76%)
Query: 1 LWPQYVRDRITSTYAYFGGSIVLSAASAYAVFTSPTMLRLVSGNSMLAMFGSIALLMGSG 60
+WPQYV+DRI STY Y GSI L+A SA A+ SP ++ + S + + + A ++G+G
Sbjct: 116 IWPQYVKDRIHSTYMYLAGSIGLTALSALALARSPALMNFMMTGSWMTIGATFAAMIGAG 175
Query: 61 MLVQSLEYKPGFGAKQIAWALHSALVGAVVAPICFIGGPVLIRAAWYTAGIVGGLSTVAA 120
MLVQS+ Y+ G K +AW LHS ++GAVVAP+ +GGP+L+RAAWYTAGIVGGLSTVA
Sbjct: 176 MLVQSISYEQSPGPKHLAWMLHSGVMGAVVAPLTILGGPLLLRAAWYTAGIVGGLSTVAM 235
Query: 121 CAPSDKFLTMGGPLAIGLGVVFASSI 146
CAPS+KFL MG PL +GLG+VFASS+
Sbjct: 236 CAPSEKFLNMGAPLGVGLGLVFASSL 261
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 106/186 (56%), Gaps = 30/186 (16%)
Query: 260 LTMFGSIALLMGSGMLVQSLEYKPGFGAKQIAWALHSALVGAVVAPICFIGGPVLIRAAW 319
+T+ + A ++G+GMLVQS+ Y+ G K +AW LHS ++GAVVAP+ +GGP+L+RAAW
Sbjct: 162 MTIGATFAAMIGAGMLVQSISYEQSPGPKHLAWMLHSGVMGAVVAPLTILGGPLLLRAAW 221
Query: 320 YTAGIVGAFKIGQGAVAGGAVLGLGALCYYGLGLSSERGAQEVQYWDWVHYVTMDWDYLV 379
YTAGIVG L +GA GLGL
Sbjct: 222 YTAGIVGGLSTVAMCAPSEKFLNMGAPLGVGLGLVFASS--------------------- 260
Query: 380 NEELWIMLRSAFLPPTTALGAGLYSITLYGGLLLFSGFLLYDTQKIITRAERTPPY--VT 437
L S FLPPT+ GA LYS+ +YGGL+LFS FLLYDTQK++ RAE TP Y
Sbjct: 261 -------LGSMFLPPTSVAGATLYSVAMYGGLVLFSMFLLYDTQKVVKRAEITPAYGAQK 313
Query: 438 YDPVNA 443
YDP+N+
Sbjct: 314 YDPINS 319
>sp|Q9DAJ5|DLRB2_MOUSE Dynein light chain roadblock-type 2 OS=Mus musculus GN=Dynlrb2 PE=1
SV=1
Length = 96
Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats.
Identities = 65/92 (70%), Positives = 80/92 (86%)
Query: 158 TEIEETLKRIQSHRGVAGVIVINGDGIPIKTTLDNQTTVQYAGLVSQLVDKAKSVVREID 217
TE+EETLKRIQSH+GV G +V+N +GIPI+TTLDN TTVQYAGL+ QL KAKS VR+ID
Sbjct: 2 TEVEETLKRIQSHKGVIGTMVVNAEGIPIRTTLDNSTTVQYAGLLHQLTMKAKSTVRDID 61
Query: 218 ATNDLTFLRLRSKKNEIMIAPDKQFILIITTN 249
NDLTFLR+RSKK+EIM+APDK+++LI+ N
Sbjct: 62 PQNDLTFLRIRSKKHEIMVAPDKEYLLIVIQN 93
>sp|Q32P85|DLRB2_BOVIN Dynein light chain roadblock-type 2 OS=Bos taurus GN=DYNLRB2 PE=3
SV=1
Length = 96
Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats.
Identities = 64/91 (70%), Positives = 79/91 (86%)
Query: 159 EIEETLKRIQSHRGVAGVIVINGDGIPIKTTLDNQTTVQYAGLVSQLVDKAKSVVREIDA 218
E+EETLKRIQSH+GV G +V+N +GIPI+TTLDN TTVQYAGL+ QL KAKS VR+ID
Sbjct: 3 EVEETLKRIQSHKGVIGTMVVNAEGIPIRTTLDNSTTVQYAGLLHQLTMKAKSTVRDIDP 62
Query: 219 TNDLTFLRLRSKKNEIMIAPDKQFILIITTN 249
NDLTFLR+RSKK+EIM+APDK+++LI+ N
Sbjct: 63 QNDLTFLRIRSKKHEIMVAPDKEYLLIVIQN 93
>sp|Q8TF09|DLRB2_HUMAN Dynein light chain roadblock-type 2 OS=Homo sapiens GN=DYNLRB2 PE=1
SV=1
Length = 96
Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats.
Identities = 63/91 (69%), Positives = 78/91 (85%)
Query: 159 EIEETLKRIQSHRGVAGVIVINGDGIPIKTTLDNQTTVQYAGLVSQLVDKAKSVVREIDA 218
E+EETLKRIQSH+GV G +V+N +GIPI+TTLDN TTVQYAGL+ L KAKS VR+ID
Sbjct: 3 EVEETLKRIQSHKGVIGTMVVNAEGIPIRTTLDNSTTVQYAGLLHHLTMKAKSTVRDIDP 62
Query: 219 TNDLTFLRLRSKKNEIMIAPDKQFILIITTN 249
NDLTFLR+RSKK+EIM+APDK+++LI+ N
Sbjct: 63 QNDLTFLRIRSKKHEIMVAPDKEYLLIVIQN 93
>sp|P62628|DLRB1_RAT Dynein light chain roadblock-type 1 OS=Rattus norvegicus GN=Dynlrb1
PE=1 SV=3
Length = 96
Score = 132 bits (333), Expect = 4e-30, Method: Composition-based stats.
Identities = 59/91 (64%), Positives = 74/91 (81%)
Query: 159 EIEETLKRIQSHRGVAGVIVINGDGIPIKTTLDNQTTVQYAGLVSQLVDKAKSVVREIDA 218
E+EETLKR+QS +GV G+IV+N +GIPIK+T+DN TT QYA L+ + KA+S VREID
Sbjct: 3 EVEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYANLMHNFILKARSTVREIDP 62
Query: 219 TNDLTFLRLRSKKNEIMIAPDKQFILIITTN 249
NDLTFLR+RSKKNEIM+APDK + LI+ N
Sbjct: 63 QNDLTFLRIRSKKNEIMVAPDKDYFLIVIQN 93
>sp|P62627|DLRB1_MOUSE Dynein light chain roadblock-type 1 OS=Mus musculus GN=Dynlrb1 PE=1
SV=3
Length = 96
Score = 132 bits (333), Expect = 4e-30, Method: Composition-based stats.
Identities = 59/91 (64%), Positives = 74/91 (81%)
Query: 159 EIEETLKRIQSHRGVAGVIVINGDGIPIKTTLDNQTTVQYAGLVSQLVDKAKSVVREIDA 218
E+EETLKR+QS +GV G+IV+N +GIPIK+T+DN TT QYA L+ + KA+S VREID
Sbjct: 3 EVEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYANLMHNFILKARSTVREIDP 62
Query: 219 TNDLTFLRLRSKKNEIMIAPDKQFILIITTN 249
NDLTFLR+RSKKNEIM+APDK + LI+ N
Sbjct: 63 QNDLTFLRIRSKKNEIMVAPDKDYFLIVIQN 93
>sp|Q3T140|DLRB1_BOVIN Dynein light chain roadblock-type 1 OS=Bos taurus GN=DYNLRB1 PE=3
SV=1
Length = 96
Score = 132 bits (333), Expect = 4e-30, Method: Composition-based stats.
Identities = 59/91 (64%), Positives = 74/91 (81%)
Query: 159 EIEETLKRIQSHRGVAGVIVINGDGIPIKTTLDNQTTVQYAGLVSQLVDKAKSVVREIDA 218
E+EETLKR+QS +GV G+IV+N +GIPIK+T+DN TT QYA L+ + KA+S VREID
Sbjct: 3 EVEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYANLMHNFILKARSTVREIDP 62
Query: 219 TNDLTFLRLRSKKNEIMIAPDKQFILIITTN 249
NDLTFLR+RSKKNEIM+APDK + LI+ N
Sbjct: 63 QNDLTFLRIRSKKNEIMVAPDKDYFLIVIQN 93
>sp|Q9NP97|DLRB1_HUMAN Dynein light chain roadblock-type 1 OS=Homo sapiens GN=DYNLRB1 PE=1
SV=3
Length = 96
Score = 131 bits (330), Expect = 1e-29, Method: Composition-based stats.
Identities = 58/91 (63%), Positives = 74/91 (81%)
Query: 159 EIEETLKRIQSHRGVAGVIVINGDGIPIKTTLDNQTTVQYAGLVSQLVDKAKSVVREIDA 218
E+EETLKR+QS +GV G+IV+N +GIPIK+T+DN TT QYA L+ + KA+S VR+ID
Sbjct: 3 EVEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDIDP 62
Query: 219 TNDLTFLRLRSKKNEIMIAPDKQFILIITTN 249
NDLTFLR+RSKKNEIM+APDK + LI+ N
Sbjct: 63 QNDLTFLRIRSKKNEIMVAPDKDYFLIVIQN 93
>sp|Q9MBD8|BI1_ORYSJ Bax inhibitor 1 OS=Oryza sativa subsp. japonica GN=BI1 PE=2 SV=1
Length = 249
Score = 36.2 bits (82), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 401 GLYSITLYGGLLLFSGFLLYDTQKIITRAER 431
G + +Y GLL+F G+++YDTQ+II RA
Sbjct: 175 GSFMFEVYFGLLIFLGYMVYDTQEIIERAHH 205
>sp|P55062|BI1_RAT Bax inhibitor 1 OS=Rattus norvegicus GN=Tmbim6 PE=2 SV=2
Length = 237
Score = 35.8 bits (81), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 402 LYSITLYGGLLLFSGFLLYDTQKIITRAER 431
L+ LY GLL+ GF+L+DTQ II +AE
Sbjct: 169 LFQANLYMGLLVMCGFVLFDTQLIIEKAEH 198
>sp|Q9D2C7|BI1_MOUSE Bax inhibitor 1 OS=Mus musculus GN=Tmbim6 PE=2 SV=1
Length = 237
Score = 35.4 bits (80), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 402 LYSITLYGGLLLFSGFLLYDTQKIITRAER 431
L+ LY GLL+ GF+L+DTQ II +AE
Sbjct: 169 LFQANLYLGLLVMCGFVLFDTQLIIEKAEH 198
>sp|Q9LD45|BI1_ARATH Bax inhibitor 1 OS=Arabidopsis thaliana GN=BI-1 PE=1 SV=1
Length = 247
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 399 GAGLYSITLYGGLLLFSGFLLYDTQKIITRAE 430
A ++ LY GLL+F G+++ DTQ+II +A
Sbjct: 172 SASIFKFELYFGLLIFVGYMVVDTQEIIEKAH 203
>sp|P55061|BI1_HUMAN Bax inhibitor 1 OS=Homo sapiens GN=TMBIM6 PE=1 SV=2
Length = 237
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 402 LYSITLYGGLLLFSGFLLYDTQKIITRAER 431
L+ LY GL++ GF+L+DTQ II +AE
Sbjct: 169 LFQANLYVGLVVMCGFVLFDTQLIIEKAEH 198
>sp|Q0V882|BI1_BOVIN Bax inhibitor 1 OS=Bos taurus GN=TMBIM6 PE=2 SV=1
Length = 236
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 402 LYSITLYGGLLLFSGFLLYDTQKIITRAER 431
L+ LY GL++ GF+L+DTQ II +AE
Sbjct: 169 LFQANLYMGLVVMCGFVLFDTQLIIEKAEN 198
>sp|Q5R7R1|BI1_PONAB Bax inhibitor 1 OS=Pongo abelii GN=TMBIM6 PE=2 SV=2
Length = 237
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 402 LYSITLYGGLLLFSGFLLYDTQKIITRAER 431
L+ LY GL++ GF+L+DTQ II +AE
Sbjct: 169 LFQANLYVGLVVMCGFVLFDTQLIIEKAEH 198
>sp|Q66RM2|BI1_PIG Bax inhibitor 1 OS=Sus scrofa GN=TMBIM6 PE=2 SV=1
Length = 237
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 402 LYSITLYGGLLLFSGFLLYDTQKIITRAER 431
L+ LY GL++ GF+L+DTQ II +AE
Sbjct: 169 LFQANLYVGLVVMCGFVLFDTQLIIEKAEN 198
>sp|Q9IA79|BI1_PAROL Probable Bax inhibitor 1 OS=Paralichthys olivaceus GN=tmbim6 PE=2
SV=1
Length = 237
Score = 32.7 bits (73), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 402 LYSITLYGGLLLFSGFLLYDTQKIITRAER 431
L+ +Y GLL+ GF+L DTQ II +AE
Sbjct: 169 LFKAHMYLGLLIMCGFVLXDTQLIIEKAEN 198
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 160,339,011
Number of Sequences: 539616
Number of extensions: 6797385
Number of successful extensions: 18022
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 17984
Number of HSP's gapped (non-prelim): 50
length of query: 443
length of database: 191,569,459
effective HSP length: 121
effective length of query: 322
effective length of database: 126,275,923
effective search space: 40660847206
effective search space used: 40660847206
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)