BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2983
(370 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357612395|gb|EHJ67964.1| putative RNA-binding region-containing protein [Danaus plexippus]
Length = 536
Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/299 (78%), Positives = 260/299 (86%), Gaps = 7/299 (2%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
DDL PEERD RT+FCMQLSQRIR +DLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK
Sbjct: 172 DDLPPEERDLRTVFCMQLSQRIRAKDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 231
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D ESVPLA+GL GQKLLG+PIIVQ TQAEKNR GNTLPNL P+ + GP RLY+GSLHFNI
Sbjct: 232 DAESVPLALGLTGQKLLGVPIIVQHTQAEKNRVGNTLPNLAPKTSNGPTRLYVGSLHFNI 291
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKID+IQLM DPDTG+SKGYGF+TFH A DAKKA EQLNGFELAGRPM
Sbjct: 292 TEDMLRGIFEPFGKIDHIQLMTDPDTGKSKGYGFLTFHHATDAKKAMEQLNGFELAGRPM 351
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R + GG + D DE++RAGVDLGATGRLQLMFKLAEGTGL++PPAAAS L
Sbjct: 352 KVGNVTERAD--GGSSTRFDADELDRAGVDLGATGRLQLMFKLAEGTGLQIPPAAASVL- 408
Query: 247 LAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
+ + L + PQV APPIATQCF+L NMFDP++E+NP+WD+EIRDDVI ECNKHG
Sbjct: 409 MGAGSTLVAPQPQV----APPIATQCFMLNNMFDPSSESNPSWDIEIRDDVISECNKHG 463
>gi|215820610|ref|NP_001135964.1| RNA binding motif protein 39 [Nasonia vitripennis]
Length = 516
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/300 (77%), Positives = 266/300 (88%), Gaps = 5/300 (1%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
SD+L+PEERDARTIFCMQLSQRIR RDLEEFFSSVGKV+DVRLITCNKTRRFKGIAY+EF
Sbjct: 146 SDELTPEERDARTIFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEF 205
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
KDPESV LA+GL+GQKLLG+PI+VQ TQAEKNR GN++PNL P+G GPMRLY+GSL FN
Sbjct: 206 KDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTGPMRLYVGSLLFN 265
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITE+ML+GIFEPFGKI+NIQL++DP+TGRSKGYGF+TF +ADDAKKA EQLNGFELAGRP
Sbjct: 266 ITEEMLKGIFEPFGKIENIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRP 325
Query: 186 MKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL 245
MKVG VT+R + + GPS LDTDE++R+G+DLGATGRLQLMFKLAEGTGLE+PPAAA+AL
Sbjct: 326 MKVGNVTERTDLI-QGPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANAL 384
Query: 246 NLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
N+ + PQ++ TAPPIATQCF+L+NMFDP E N W EIRDDVIEECNKHG
Sbjct: 385 NMTPVV----TAPQINQQTAPPIATQCFMLSNMFDPQNENNSLWVKEIRDDVIEECNKHG 440
>gi|350410158|ref|XP_003488966.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus impatiens]
Length = 532
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 237/300 (79%), Positives = 268/300 (89%), Gaps = 5/300 (1%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
+D+L+PEERDART+FCMQLSQRIR RDLEEFFSSVGKV+DVRLITCNKTRRFKGIAY+EF
Sbjct: 162 NDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEF 221
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
KDPESV LA+GL+GQKLLG+PI+VQ TQAEKNR GN++PNL P+G GPMRLY+GSLHFN
Sbjct: 222 KDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTGPMRLYVGSLHFN 281
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITEDMLRGIFEPFGKIDNIQL++DP+TGRSKGYGF+TF +ADDAKKA EQLNGFELAGRP
Sbjct: 282 ITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRP 341
Query: 186 MKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL 245
MKVG VT+R + + GPS LDTDE++R+G+DLGATGRLQLMFKLAEGTGLE+PPAAA+AL
Sbjct: 342 MKVGNVTERTDLI-QGPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANAL 400
Query: 246 NLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
N+A STPQ APPIATQCF+L+NMFDP ETNP W EIRDDVIEECNKHG
Sbjct: 401 NMAPVM----STPQPPPQAAPPIATQCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHG 456
>gi|340718898|ref|XP_003397899.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus
terrestris]
Length = 520
Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust.
Identities = 237/300 (79%), Positives = 268/300 (89%), Gaps = 5/300 (1%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
+D+L+PEERDART+FCMQLSQRIR RDLEEFFSSVGKV+DVRLITCNKTRRFKGIAY+EF
Sbjct: 150 NDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEF 209
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
KDPESV LA+GL+GQKLLG+PI+VQ TQAEKNR GN++PNL P+G GPMRLY+GSLHFN
Sbjct: 210 KDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTGPMRLYVGSLHFN 269
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITEDMLRGIFEPFGKIDNIQL++DP+TGRSKGYGF+TF +ADDAKKA EQLNGFELAGRP
Sbjct: 270 ITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRP 329
Query: 186 MKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL 245
MKVG VT+R + + GPS LDTDE++R+G+DLGATGRLQLMFKLAEGTGLE+PPAAA+AL
Sbjct: 330 MKVGNVTERTDLI-QGPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANAL 388
Query: 246 NLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
N+A STPQ APPIATQCF+L+NMFDP ETNP W EIRDDVIEECNKHG
Sbjct: 389 NMAPVM----STPQPPPQAAPPIATQCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHG 444
>gi|350410161|ref|XP_003488967.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus impatiens]
Length = 508
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/300 (79%), Positives = 268/300 (89%), Gaps = 5/300 (1%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
+D+L+PEERDART+FCMQLSQRIR RDLEEFFSSVGKV+DVRLITCNKTRRFKGIAY+EF
Sbjct: 138 NDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEF 197
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
KDPESV LA+GL+GQKLLG+PI+VQ TQAEKNR GN++PNL P+G GPMRLY+GSLHFN
Sbjct: 198 KDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTGPMRLYVGSLHFN 257
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITEDMLRGIFEPFGKIDNIQL++DP+TGRSKGYGF+TF +ADDAKKA EQLNGFELAGRP
Sbjct: 258 ITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRP 317
Query: 186 MKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL 245
MKVG VT+R + + GPS LDTDE++R+G+DLGATGRLQLMFKLAEGTGLE+PPAAA+AL
Sbjct: 318 MKVGNVTERTDLI-QGPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANAL 376
Query: 246 NLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
N+A STPQ APPIATQCF+L+NMFDP ETNP W EIRDDVIEECNKHG
Sbjct: 377 NMAPVM----STPQPPPQAAPPIATQCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHG 432
>gi|340718900|ref|XP_003397900.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus
terrestris]
Length = 508
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/300 (79%), Positives = 268/300 (89%), Gaps = 5/300 (1%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
+D+L+PEERDART+FCMQLSQRIR RDLEEFFSSVGKV+DVRLITCNKTRRFKGIAY+EF
Sbjct: 138 NDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEF 197
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
KDPESV LA+GL+GQKLLG+PI+VQ TQAEKNR GN++PNL P+G GPMRLY+GSLHFN
Sbjct: 198 KDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTGPMRLYVGSLHFN 257
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITEDMLRGIFEPFGKIDNIQL++DP+TGRSKGYGF+TF +ADDAKKA EQLNGFELAGRP
Sbjct: 258 ITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRP 317
Query: 186 MKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL 245
MKVG VT+R + + GPS LDTDE++R+G+DLGATGRLQLMFKLAEGTGLE+PPAAA+AL
Sbjct: 318 MKVGNVTERTDLI-QGPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANAL 376
Query: 246 NLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
N+A STPQ APPIATQCF+L+NMFDP ETNP W EIRDDVIEECNKHG
Sbjct: 377 NMAPVM----STPQPPPQAAPPIATQCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHG 432
>gi|328781105|ref|XP_624668.3| PREDICTED: RNA-binding protein 39-like [Apis mellifera]
Length = 506
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/300 (78%), Positives = 268/300 (89%), Gaps = 5/300 (1%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
+D+L+PEERDART+FCMQLSQRIR RDLEEFFSSVGKV+DVRLITCNKTRRFKGIAY+EF
Sbjct: 136 NDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEF 195
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
KDPESV LA+GL+GQKLLG+PI+VQ TQAEKNR GN++PNL P+G GPMRLY+GSLHFN
Sbjct: 196 KDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTGPMRLYVGSLHFN 255
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITEDMLRGIFEPFGKIDNIQL++DP+TGRSKGYGF+TF +ADDAKKA EQLNGFELAGRP
Sbjct: 256 ITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRP 315
Query: 186 MKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL 245
MKVG VT+R + + GPS LDTDE++R+G++LGATGRLQLMFKLAEGTGLE+PPAAA+AL
Sbjct: 316 MKVGNVTERTDLI-QGPSLLDTDELDRSGIELGATGRLQLMFKLAEGTGLEIPPAAANAL 374
Query: 246 NLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
N+A STPQ APPIATQCF+L+NMFDP ETNP W EIRDDVIEECNKHG
Sbjct: 375 NMAPVM----STPQPPPQVAPPIATQCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHG 430
>gi|383864352|ref|XP_003707643.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Megachile
rotundata]
Length = 530
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/300 (78%), Positives = 268/300 (89%), Gaps = 5/300 (1%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
+D+L+PEERDART+FCMQLSQRIR RDLE+FFSSVGKV+DVRLITCNKTRRFKGIAY+EF
Sbjct: 160 NDELTPEERDARTVFCMQLSQRIRARDLEDFFSSVGKVQDVRLITCNKTRRFKGIAYVEF 219
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
KDPESV LA+GL+GQKLLG+PI+VQ TQAEKNR GN++PNL P+G GPMRLY+GSLHFN
Sbjct: 220 KDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTGPMRLYVGSLHFN 279
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITEDMLRGIFEPFGKIDNIQL++DP+TGRSKGYGF+TF +ADDAKKA EQLNGFELAGRP
Sbjct: 280 ITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRP 339
Query: 186 MKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL 245
MKVG VT+R + + GPS LDTDE++R+G+DLGATGRLQLMFKLAEGTGLE+PPAAA+AL
Sbjct: 340 MKVGNVTERTDLI-QGPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANAL 398
Query: 246 NLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
N+A STPQ APPIATQCF+L+NMFDP ETNP W EIRDDVIEECNKHG
Sbjct: 399 NMAPVM----STPQPPPQAAPPIATQCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHG 454
>gi|383864354|ref|XP_003707644.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Megachile
rotundata]
Length = 507
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/300 (78%), Positives = 268/300 (89%), Gaps = 5/300 (1%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
+D+L+PEERDART+FCMQLSQRIR RDLE+FFSSVGKV+DVRLITCNKTRRFKGIAY+EF
Sbjct: 137 NDELTPEERDARTVFCMQLSQRIRARDLEDFFSSVGKVQDVRLITCNKTRRFKGIAYVEF 196
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
KDPESV LA+GL+GQKLLG+PI+VQ TQAEKNR GN++PNL P+G GPMRLY+GSLHFN
Sbjct: 197 KDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTGPMRLYVGSLHFN 256
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITEDMLRGIFEPFGKIDNIQL++DP+TGRSKGYGF+TF +ADDAKKA EQLNGFELAGRP
Sbjct: 257 ITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRP 316
Query: 186 MKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL 245
MKVG VT+R + + GPS LDTDE++R+G+DLGATGRLQLMFKLAEGTGLE+PPAAA+AL
Sbjct: 317 MKVGNVTERTDLI-QGPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANAL 375
Query: 246 NLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
N+A STPQ APPIATQCF+L+NMFDP ETNP W EIRDDVIEECNKHG
Sbjct: 376 NMAPVM----STPQPPPQAAPPIATQCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHG 431
>gi|189237575|ref|XP_974855.2| PREDICTED: similar to splicing factor [Tribolium castaneum]
Length = 501
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/299 (76%), Positives = 262/299 (87%), Gaps = 3/299 (1%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
++LSPEERDART+F MQLSQRIR RDLEEFFSSVGKVRDVRLI CNKTRRFKGIAYIEFK
Sbjct: 133 EELSPEERDARTVFVMQLSQRIRARDLEEFFSSVGKVRDVRLIVCNKTRRFKGIAYIEFK 192
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
DPESV LA+GL+GQKLLG+PIIVQ TQAEKNR GN++PNL P+ GPMRLY+GSLHFNI
Sbjct: 193 DPESVTLALGLSGQKLLGVPIIVQHTQAEKNRMGNSMPNLMPKNMTGPMRLYVGSLHFNI 252
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLR IFEPFGKIDNIQL++DP+TGRSKGYGFI F + +DAKKA EQLNGFELAGRPM
Sbjct: 253 TEDMLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIAFRNCEDAKKALEQLNGFELAGRPM 312
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R + GPS LD+DE++R+G+DLGATGRLQLMFKLAEG G+++P AAA+AL+
Sbjct: 313 KVGNVTERLDLQQQGPSILDSDELDRSGIDLGATGRLQLMFKLAEGAGMQVPQAAANALS 372
Query: 247 LAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
+A PQV +++ PPIATQCF+L+NMFDPATE+ TWDVEIRDDVIEECNKHG
Sbjct: 373 IATG---QPVVPQVQTNSTPPIATQCFMLSNMFDPATESTQTWDVEIRDDVIEECNKHG 428
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/299 (76%), Positives = 263/299 (87%), Gaps = 3/299 (1%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
++LSPEERDART+F MQLSQRIR RDLEEFFSSVGKVRDVRLI CNKTRRFKGIAYIEFK
Sbjct: 154 EELSPEERDARTVFVMQLSQRIRARDLEEFFSSVGKVRDVRLIVCNKTRRFKGIAYIEFK 213
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
DPESV LA+GL+GQKLLG+PIIVQ TQAEKNR GN++PNL P+ GPMRLY+GSLHFNI
Sbjct: 214 DPESVTLALGLSGQKLLGVPIIVQHTQAEKNRMGNSMPNLMPKNMTGPMRLYVGSLHFNI 273
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLR IFEPFGKIDNIQL++DP+TGRSKGYGFI F + +DAKKA EQLNGFELAGRPM
Sbjct: 274 TEDMLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIAFRNCEDAKKALEQLNGFELAGRPM 333
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R + GPS LD+DE++R+G+DLGATGRLQLMFKLAEG G+++P AAA+AL+
Sbjct: 334 KVGNVTERLDLQQQGPSILDSDELDRSGIDLGATGRLQLMFKLAEGAGMQVPQAAANALS 393
Query: 247 LAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
+A + PQV +++ PPIATQCF+L+NMFDPATE+ TWDVEIRDDVIEECNKHG
Sbjct: 394 IATGQPV---VPQVQTNSTPPIATQCFMLSNMFDPATESTQTWDVEIRDDVIEECNKHG 449
>gi|380012525|ref|XP_003690330.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like [Apis
florea]
Length = 506
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/300 (78%), Positives = 267/300 (89%), Gaps = 5/300 (1%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
+D+L+PEERDART+FCMQLSQRIR RDLEEFFSSVGKV+DVRLITCNKTRRFKGIAY+EF
Sbjct: 136 NDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEF 195
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
KDPESV LA+GL+GQKLLG+PI+VQ TQAEKNR GN++PNL P+G GPMRLY+GSLHFN
Sbjct: 196 KDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTGPMRLYVGSLHFN 255
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITEDMLRGIFEPFGKIDNIQL++DP TGRSKGYGF+TF +ADDAKKA EQLNGFELAGRP
Sbjct: 256 ITEDMLRGIFEPFGKIDNIQLIMDPXTGRSKGYGFLTFRNADDAKKALEQLNGFELAGRP 315
Query: 186 MKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL 245
MKVG VT+R + + GPS LDTDE++R+G++LGATGRLQLMFKLAEGTGLE+PPAAA+AL
Sbjct: 316 MKVGNVTERTDLI-QGPSLLDTDELDRSGIELGATGRLQLMFKLAEGTGLEIPPAAANAL 374
Query: 246 NLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
N+A STPQ APPIATQCF+L+NMFDP ETNP W EIRDDVIEECNKHG
Sbjct: 375 NMAPVM----STPQPPPQVAPPIATQCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHG 430
>gi|307195359|gb|EFN77277.1| RNA-binding protein 39 [Harpegnathos saltator]
Length = 370
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/299 (78%), Positives = 266/299 (88%), Gaps = 5/299 (1%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQLSQRIR RDLEEFFSSVGKV+DVRLITCNKTRRFKGIAY+EFK
Sbjct: 1 DELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEFK 60
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
DPESV LA+GL+GQKLLG+PI+VQ TQAEKNR GN++PNL P+G GPMRLY+GSLHFNI
Sbjct: 61 DPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTGPMRLYVGSLHFNI 120
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNIQL++DP+TGRSKGYGF+TF +ADDAKKA EQLNGFELAGRPM
Sbjct: 121 TEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRPM 180
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R + + GPS LDTDE++R+G+DLGATGRLQLMFKLAEGTGLE+PPAAA+ALN
Sbjct: 181 KVGNVTERTDLI-QGPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANALN 239
Query: 247 LAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
+A + PQ APPIATQCF+L+NMFDP ETNP W EIRDDVIEECNKHG
Sbjct: 240 MAPVM----TAPQPPPQAAPPIATQCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHG 294
>gi|307180960|gb|EFN68748.1| RNA-binding protein 39 [Camponotus floridanus]
Length = 529
Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/300 (77%), Positives = 266/300 (88%), Gaps = 5/300 (1%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
+D+L+PEERDART+FCMQLSQRIR RDLEEFFSSVGKV+DVRLITCNKTRRFKGIAY+EF
Sbjct: 159 NDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEF 218
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
KDPESV LA+GL+GQKLLG+PI+VQ TQAEKNR GN++PNL P+G GPMRLY+GSLHFN
Sbjct: 219 KDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTGPMRLYVGSLHFN 278
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITEDMLRGIFEPFGKIDNIQL++DP+TGRSKGYGF+TF +ADDAKKA EQLNGFELAGRP
Sbjct: 279 ITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRP 338
Query: 186 MKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL 245
MKVG VT+R + + GPS LDTDE++R+G+DLGATGRLQLMFKLAEGTGLE+PPAAA+AL
Sbjct: 339 MKVGNVTERTDLI-QGPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANAL 397
Query: 246 NLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
N+A ++ P ++ IATQCF+L+NMFDP ETNP W EIRDDVIEECNKHG
Sbjct: 398 NMA--PVMTQPQPPPQAAPP--IATQCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHG 453
>gi|332019312|gb|EGI59819.1| RNA-binding protein 39 [Acromyrmex echinatior]
Length = 528
Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/300 (77%), Positives = 264/300 (88%), Gaps = 5/300 (1%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
+D+L+PEERDART+FCMQLSQRIR RDLEEFFSSVGKV+DVRLITCNKTRRFKGIAY+EF
Sbjct: 158 NDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEF 217
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
KDPESV LA+GL+GQKLLG+PI+VQ TQAEKNR GN++PNL P+G GPMRLY+GSLHFN
Sbjct: 218 KDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTGPMRLYVGSLHFN 277
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITEDMLRGIFEPFGKIDNIQL++DP+TGRSKGYGF+TF +ADDAKKA EQLNGFELAGRP
Sbjct: 278 ITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRP 337
Query: 186 MKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL 245
MKVG VT+R + + GPS LDTDE++R+G+DLGATGRLQLMFKLAEGTGLE+PPAAA+AL
Sbjct: 338 MKVGNVTERTDLI-QGPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANAL 396
Query: 246 NLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
N+A PQ + IATQCF+L+NMFDP ETNP W EIRDDVIEECNKHG
Sbjct: 397 NMAPVMAQPQPPPQAAPP----IATQCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHG 452
>gi|242015973|ref|XP_002428613.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
gi|212513276|gb|EEB15875.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
Length = 593
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/300 (80%), Positives = 268/300 (89%), Gaps = 9/300 (3%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
DDL+PEERD RT+FCMQLSQRIR RDLEEFFSSVGKVRDV+LITCNKTRRFKGIAY+EFK
Sbjct: 156 DDLTPEERDQRTVFCMQLSQRIRGRDLEEFFSSVGKVRDVKLITCNKTRRFKGIAYVEFK 215
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGN-TLPNLQPRGTGGPMRLYIGSLHFN 125
DPESVPLAMGL GQKLLGIPI VQPTQAEKNR GN T P + P GPMRLY+GSLHFN
Sbjct: 216 DPESVPLAMGLTGQKLLGIPISVQPTQAEKNRQGNSTAPMMMPSDMRGPMRLYVGSLHFN 275
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITEDMLRGIFEPFGKID+IQL++DP+TGRSKGYGFITFHSADDAKKA EQLNGFELAGRP
Sbjct: 276 ITEDMLRGIFEPFGKIDSIQLIMDPETGRSKGYGFITFHSADDAKKALEQLNGFELAGRP 335
Query: 186 MKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL 245
MKVG V +R +++ G S LDTDE++R+G+DLGATGRLQLM+KLAEGTG+++PPAAA+AL
Sbjct: 336 MKVGNVQERTDNIAGT-SILDTDELDRSGIDLGATGRLQLMYKLAEGTGMQIPPAAATAL 394
Query: 246 NLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
NLA ++ PQ + APPIATQCF+LANMFDPATETNPTWDVEIRDDVIEECNKHG
Sbjct: 395 NLA------NALPQ-AVQPAPPIATQCFMLANMFDPATETNPTWDVEIRDDVIEECNKHG 447
>gi|157108428|ref|XP_001650224.1| splicing factor [Aedes aegypti]
gi|108879330|gb|EAT43555.1| AAEL005046-PA [Aedes aegypti]
Length = 544
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/306 (74%), Positives = 252/306 (82%), Gaps = 11/306 (3%)
Query: 5 YSDD-----LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKG 59
Y DD LS E+RDART+FCMQLSQRIR RDLEEFFSSVGKVRDVRLITCNKT+RFKG
Sbjct: 172 YRDDSPREELSVEDRDARTVFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTKRFKG 231
Query: 60 IAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYI 119
IAYIEFKDPESV LA+GL+GQ+LLGIPI VQ TQAEKNR +T P P+ T GPMRLY+
Sbjct: 232 IAYIEFKDPESVALALGLSGQRLLGIPISVQHTQAEKNRMASTPPQPPPKVTSGPMRLYV 291
Query: 120 GSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGF 179
GSLHFNITEDMLRGIFEPFGKIDNIQL++D DTGRSKGYGFITFH+ADDAKKA EQLNGF
Sbjct: 292 GSLHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKALEQLNGF 351
Query: 180 ELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPP 239
ELAGRPMKVG VT+R + ++LDTDEM+R+G+DLGATGRLQLMFKLAEG GL +P
Sbjct: 352 ELAGRPMKVGNVTERLDVTTH--ASLDTDEMDRSGIDLGATGRLQLMFKLAEGAGLAVP- 408
Query: 240 AAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIE 299
A A A PQ + +PPIATQCFLL+NMFDP TETNPTWD EI DDVIE
Sbjct: 409 ---RAAADALLATAPQPAPQQPVAPSPPIATQCFLLSNMFDPTTETNPTWDTEIEDDVIE 465
Query: 300 ECNKHG 305
ECNKHG
Sbjct: 466 ECNKHG 471
>gi|215820612|ref|NP_001135965.1| RNA binding motif protein 39 [Acyrthosiphon pisum]
Length = 501
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/300 (72%), Positives = 250/300 (83%), Gaps = 7/300 (2%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+PEERDART+FCMQLS+ IR RDLEEFFSSVGKVRDVR+ITCNKTRRFKGIAYIEFKDP
Sbjct: 132 LTPEERDARTVFCMQLSKTIRARDLEEFFSSVGKVRDVRMITCNKTRRFKGIAYIEFKDP 191
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
ESVPLAMGLNGQKLLG+PI+VQPTQAEKNR N++PN+ R GPM+LY+GSLH+NITE
Sbjct: 192 ESVPLAMGLNGQKLLGVPIVVQPTQAEKNRMANSMPNMVQRTHYGPMKLYVGSLHYNITE 251
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+MLRGIFEPFG +DNIQLM+D +TGRSKGYGF+T+ +A+DAKKA E LNGFE+AGRPMKV
Sbjct: 252 EMLRGIFEPFGHVDNIQLMMDTETGRSKGYGFLTYRNAEDAKKALEHLNGFEIAGRPMKV 311
Query: 189 GTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLA 248
G VT+ N SV + + DE++RAG DLGATGRLQLM+KLAEGTG +P AAA+AL +A
Sbjct: 312 GHVTE-NHSVYDK-TAFEVDELDRAGYDLGATGRLQLMYKLAEGTGFPIPQAAANALQVA 369
Query: 249 QNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATE---TNPTWDVEIRDDVIEECNKHG 305
+ P V PPIATQCFLLANMFDP E +N TW+ EIRDDVIEECNKHG
Sbjct: 370 SGVQAAPAAPTV--QVTPPIATQCFLLANMFDPNKEDVDSNTTWETEIRDDVIEECNKHG 427
>gi|118788821|ref|XP_317010.3| AGAP008433-PA [Anopheles gambiae str. PEST]
gi|116122929|gb|EAA12873.4| AGAP008433-PA [Anopheles gambiae str. PEST]
Length = 526
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/299 (73%), Positives = 248/299 (82%), Gaps = 6/299 (2%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
+++S E+RDART+FCMQLSQRI RDLEEFFSSVGKVRDVRLITCNKT+RFKGIAYIEFK
Sbjct: 161 EEMSQEDRDARTVFCMQLSQRIHARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFK 220
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
DPESV LA+GL+GQKLLGIPI VQ TQAEKNR + P P+ GPMRLY+GSLHFNI
Sbjct: 221 DPESVALALGLSGQKLLGIPISVQHTQAEKNRMASQPPVAPPKNPSGPMRLYVGSLHFNI 280
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDML GIFEPFGKIDNIQL++D DTGRSKGYGFITFH+ADDAKKA EQLNGFELAGRPM
Sbjct: 281 TEDMLNGIFEPFGKIDNIQLIMDADTGRSKGYGFITFHNADDAKKALEQLNGFELAGRPM 340
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R + ++LDTDEM+R+G++LGATGRLQLMFKLAEG GL +P A
Sbjct: 341 KVGNVTERLDVTTH--ASLDTDEMDRSGIELGATGRLQLMFKLAEGAGLAVP----RAAA 394
Query: 247 LAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
A A PQ +PPIATQCFLL+NMFDPATETNP WD+EI+DDVIEECNKHG
Sbjct: 395 DALLATAPQPVPQQPIMQSPPIATQCFLLSNMFDPATETNPNWDLEIQDDVIEECNKHG 453
>gi|170058744|ref|XP_001865056.1| splicing factor [Culex quinquefasciatus]
gi|167877732|gb|EDS41115.1| splicing factor [Culex quinquefasciatus]
Length = 546
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/299 (74%), Positives = 248/299 (82%), Gaps = 6/299 (2%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
++LSPEERD RT+FCMQLSQRIR RDLEEFFSSVGKVRDVRLITCNKT+RFKGIAYIEF+
Sbjct: 181 EELSPEERDMRTVFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFR 240
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
DPESV LA+GL+GQ+LLGIPI VQ TQAEKNR N P P+ GPMRLY+GSLHFNI
Sbjct: 241 DPESVALALGLSGQRLLGIPISVQHTQAEKNRLANIPPPPPPKVIVGPMRLYVGSLHFNI 300
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNIQL++D DTGRSKGYGFITFH+ADDAKKA EQLNGFELAGRPM
Sbjct: 301 TEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKALEQLNGFELAGRPM 360
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R + ++LDTDEM+R+G+DLGATGRLQLMFKLAEG GL +P A
Sbjct: 361 KVGNVTERLDVTTH--ASLDTDEMDRSGIDLGATGRLQLMFKLAEGAGLAVP----RAAA 414
Query: 247 LAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
A A P +P IATQCFLL+NMFDPATETNP+WDVEI DDVIEECNKHG
Sbjct: 415 DALLATAPQPAPNQPVQDSPAIATQCFLLSNMFDPATETNPSWDVEIEDDVIEECNKHG 473
>gi|194862772|ref|XP_001970115.1| GG10454 [Drosophila erecta]
gi|190661982|gb|EDV59174.1| GG10454 [Drosophila erecta]
Length = 593
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/298 (73%), Positives = 249/298 (83%), Gaps = 7/298 (2%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+LSPEERDART+FC+QLSQR+R RDLEEFFSSVGKVRDVRLITCNKT+RFKGIAYIEF+D
Sbjct: 227 ELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFED 286
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
PESV LA+GL+GQ+LLG+PI+VQ TQAEKNR N P QP+ GPMRLY+GSLHFNIT
Sbjct: 287 PESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPMRLYVGSLHFNIT 346
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
EDMLRGIFEPFGKID IQL++D +TGRSKGYGFIT+H+ADDAKKA EQLNGFELAGR MK
Sbjct: 347 EDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLMK 406
Query: 188 VGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL 247
VG VT+R + ++LDTDEM+R G+DLGATGRLQLMFKLAEG GL +P AAA+AL
Sbjct: 407 VGNVTER---LDMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGAGLAVPQAAANALLA 463
Query: 248 AQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
P AP IATQCF+L+NMFDP TETNPTWDVEIRDDV+EEC KHG
Sbjct: 464 TA----PQPAPMQQQEAAPSIATQCFILSNMFDPRTETNPTWDVEIRDDVLEECAKHG 517
>gi|170071297|ref|XP_001869868.1| splicing factor [Culex quinquefasciatus]
gi|167867202|gb|EDS30585.1| splicing factor [Culex quinquefasciatus]
Length = 524
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/298 (75%), Positives = 247/298 (82%), Gaps = 6/298 (2%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+LSPEERD RT+FCMQLSQRIR RDLEEFFSSVGKVRDVRLITCNKT+RFKGIAYIEF+D
Sbjct: 160 ELSPEERDMRTVFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFRD 219
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
PESV LA+GL+GQ+LLGIPI VQ TQAEKNR N P P+ GPMRLY+GSLHFNIT
Sbjct: 220 PESVALALGLSGQRLLGIPISVQHTQAEKNRLANIPPPPPPKVIVGPMRLYVGSLHFNIT 279
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
EDMLRGIFEPFGKIDNIQL++D DTGRSKGYGFITFH+ADDAKKA EQLNGFELAGRPMK
Sbjct: 280 EDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKALEQLNGFELAGRPMK 339
Query: 188 VGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL 247
VG VT+R + ++LDTDEM+R+G+DLGATGRLQLMFKLAEG GL +P A
Sbjct: 340 VGNVTERLDVTTH--ASLDTDEMDRSGIDLGATGRLQLMFKLAEGAGLAVP----RAAAD 393
Query: 248 AQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
A A P +P IATQCFLL+NMFDPATETNP+WDVEI DDVIEECNKHG
Sbjct: 394 ALLATAPQPAPNQPVQDSPAIATQCFLLSNMFDPATETNPSWDVEIEDDVIEECNKHG 451
>gi|195577213|ref|XP_002078467.1| GD23448 [Drosophila simulans]
gi|194190476|gb|EDX04052.1| GD23448 [Drosophila simulans]
Length = 608
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/298 (73%), Positives = 248/298 (83%), Gaps = 7/298 (2%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+LSPEERDART+FC+QLSQR+R RDLEEFFSSVGKVRDVRLITCNKT+RFKGIAYIEF D
Sbjct: 242 ELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDD 301
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
PESV LA+GL+GQ+LLG+PI+VQ TQAEKNR N P QP+ GPMRLY+GSLHFNIT
Sbjct: 302 PESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKSHTGPMRLYVGSLHFNIT 361
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
EDMLRGIFEPFGKID IQL++D +TGRSKGYGFIT+H+ADDAKKA EQLNGFELAGR MK
Sbjct: 362 EDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLMK 421
Query: 188 VGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL 247
VG VT+R + ++LDTDEM+R G+DLGATGRLQLMFKLAEG GL +P AAA+AL
Sbjct: 422 VGNVTER---LDMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGAGLAVPQAAANALLA 478
Query: 248 AQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
P AP IATQCF+L+NMFDP TETNPTWDVEIRDDV+EEC KHG
Sbjct: 479 TA----PQPAPLQQQEVAPSIATQCFILSNMFDPRTETNPTWDVEIRDDVLEECAKHG 532
>gi|195338839|ref|XP_002036031.1| GM16278 [Drosophila sechellia]
gi|194129911|gb|EDW51954.1| GM16278 [Drosophila sechellia]
Length = 596
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/298 (73%), Positives = 248/298 (83%), Gaps = 7/298 (2%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+LSPEERDART+FC+QLSQR+R RDLEEFFSSVGKVRDVRLITCNKT+RFKGIAYIEF D
Sbjct: 230 ELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDD 289
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
PESV LA+GL+GQ+LLG+PI+VQ TQAEKNR N P QP+ GPMRLY+GSLHFNIT
Sbjct: 290 PESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKSHTGPMRLYVGSLHFNIT 349
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
EDMLRGIFEPFGKID IQL++D +TGRSKGYGFIT+H+ADDAKKA EQLNGFELAGR MK
Sbjct: 350 EDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLMK 409
Query: 188 VGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL 247
VG VT+R + ++LDTDEM+R G+DLGATGRLQLMFKLAEG GL +P AAA+AL
Sbjct: 410 VGNVTER---LDMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGAGLAVPQAAANALLA 466
Query: 248 AQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
P AP IATQCF+L+NMFDP TETNPTWDVEIRDDV+EEC KHG
Sbjct: 467 TA----PQPAPLQQQEVAPSIATQCFILSNMFDPRTETNPTWDVEIRDDVLEECAKHG 520
>gi|195050249|ref|XP_001992854.1| GH13506 [Drosophila grimshawi]
gi|193899913|gb|EDV98779.1| GH13506 [Drosophila grimshawi]
Length = 628
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/298 (72%), Positives = 246/298 (82%), Gaps = 7/298 (2%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+LSPEERDART+FC+QLSQR+R RDLEEFFSSVGKVRDVRLITCNKT+RFKGIAYIEF+D
Sbjct: 262 ELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFED 321
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
PESV LA+GL+GQ+LLG+PI+VQ TQAEKNR + P QP+ GPMRLY+GSLHFNIT
Sbjct: 322 PESVALALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKLHTGPMRLYVGSLHFNIT 381
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
EDMLRGIFEPFGKID IQL++D +TGRSKGYGFIT+H+ADDAKKA EQLNGFELAGRPMK
Sbjct: 382 EDMLRGIFEPFGKIDVIQLIMDNETGRSKGYGFITYHNADDAKKALEQLNGFELAGRPMK 441
Query: 188 VGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL 247
VG VT+R + S+LDTDEM+R+G+DLGATGRLQLMFKLAEG GL +P A
Sbjct: 442 VGNVTER---LDMNTSSLDTDEMDRSGIDLGATGRLQLMFKLAEGAGLAVP----QAAAN 494
Query: 248 AQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
A A P P IATQCF+L+NMFDP TETNPTWD E+RDDV+EEC KHG
Sbjct: 495 ALLATAPQPAPMQHEQQTPSIATQCFILSNMFDPRTETNPTWDTEVRDDVLEECTKHG 552
>gi|19920866|ref|NP_609095.1| CG11266, isoform B [Drosophila melanogaster]
gi|24582412|ref|NP_723243.1| CG11266, isoform A [Drosophila melanogaster]
gi|7297213|gb|AAF52478.1| CG11266, isoform A [Drosophila melanogaster]
gi|15292031|gb|AAK93284.1| LD35730p [Drosophila melanogaster]
gi|22945834|gb|AAN10614.1| CG11266, isoform B [Drosophila melanogaster]
gi|220946034|gb|ACL85560.1| CG11266-PA [synthetic construct]
gi|220955788|gb|ACL90437.1| CG11266-PA [synthetic construct]
Length = 594
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/298 (73%), Positives = 248/298 (83%), Gaps = 7/298 (2%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+LSPEERDART+FC+QLSQR+R RDLEEFFSSVGKVRDVRLITCNKT+RFKGIAYIEF D
Sbjct: 228 ELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDD 287
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
PESV LA+GL+GQ+LLG+PI+VQ TQAEKNR N P QP+ GPMRLY+GSLHFNIT
Sbjct: 288 PESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPMRLYVGSLHFNIT 347
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
EDMLRGIFEPFGKID IQL++D +TGRSKGYGFIT+H+ADDAKKA EQLNGFELAGR MK
Sbjct: 348 EDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLMK 407
Query: 188 VGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL 247
VG VT+R + ++LDTDEM+R G+DLGATGRLQLMFKLAEG GL +P AAA+AL
Sbjct: 408 VGNVTER---LDMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGAGLAVPQAAANALLA 464
Query: 248 AQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
P AP IATQCF+L+NMFDP TETNPTWDVEIRDDV+EEC KHG
Sbjct: 465 TA----PQPAPLQQQEVAPSIATQCFILSNMFDPRTETNPTWDVEIRDDVLEECAKHG 518
>gi|195471585|ref|XP_002088083.1| GE14328 [Drosophila yakuba]
gi|194174184|gb|EDW87795.1| GE14328 [Drosophila yakuba]
Length = 590
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/298 (73%), Positives = 249/298 (83%), Gaps = 7/298 (2%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+LSPEERDART+FC+QLSQR+R RDLEEFFSSVGKVRDVRLITCNKT+RFKGIAYIEF+D
Sbjct: 224 ELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFED 283
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
PESV LA+GL+GQ+LLG+PI+VQ TQAEKNR N P QP+ GPMRLY+GSLHFNIT
Sbjct: 284 PESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPMRLYVGSLHFNIT 343
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
EDMLRGIFEPFGKID IQL++D +TGRSKGYGFIT+H+ADDAKKA EQLNGFELAGR MK
Sbjct: 344 EDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLMK 403
Query: 188 VGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL 247
VG VT+R + ++LDTDEM+R G+DLGATGRLQLMFKLAEG GL +P AAA+AL
Sbjct: 404 VGNVTER---LDMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGAGLAVPQAAANALLA 460
Query: 248 AQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
P AP IATQCF+L+NMFDP TETNPTWDVEI+DDV+EEC KHG
Sbjct: 461 TA----PQPAPLQQQEAAPSIATQCFILSNMFDPRTETNPTWDVEIKDDVLEECAKHG 514
>gi|195434196|ref|XP_002065089.1| GK15272 [Drosophila willistoni]
gi|194161174|gb|EDW76075.1| GK15272 [Drosophila willistoni]
Length = 612
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/298 (73%), Positives = 249/298 (83%), Gaps = 7/298 (2%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+LSPEERDART+FC+QLSQR+R RDLEEFFSSVGKVRDVR+ITCNKT+RFKGIAYIEF+D
Sbjct: 246 ELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRMITCNKTKRFKGIAYIEFED 305
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
PESV LA+GL+GQ+LLG+PI+VQ TQAEKNR N P QP+ GPMRLY+GSLHFNIT
Sbjct: 306 PESVSLALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPMRLYVGSLHFNIT 365
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
EDMLRGIFEPFGKID IQL++D +TGRSKGYGFIT+H+ADDAKKA EQLNGFELAGRPMK
Sbjct: 366 EDMLRGIFEPFGKIDVIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRPMK 425
Query: 188 VGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL 247
VG VT+R + ++LDTDEM+R G+DLGATGRLQLMFKLAEG GL +P AAA+AL
Sbjct: 426 VGNVTER---LDMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGAGLAVPQAAANALLA 482
Query: 248 AQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
Q + S IATQCF+L+NMFDPATETN TWD EIRDDV+EEC KHG
Sbjct: 483 TAPQPAPVQQQQQTPS----IATQCFILSNMFDPATETNTTWDSEIRDDVLEECAKHG 536
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/298 (71%), Positives = 246/298 (82%), Gaps = 7/298 (2%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+LSPEERDART+FC+QLSQR+R RDLEEFFSSVGKVRDVRLITCNKT+RFKGIAYIEF+D
Sbjct: 251 ELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFED 310
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
PESV LA+GL+GQ+LLG+PI+VQ TQAEKNR + P QP+ GPMRLY+GSLHFNIT
Sbjct: 311 PESVALALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKAHTGPMRLYVGSLHFNIT 370
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
EDMLRGIFEPFGKID IQL++D +TGRSKGYGFIT+H+ADDAKKA EQLNGFELAGRPMK
Sbjct: 371 EDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRPMK 430
Query: 188 VGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL 247
VG VT+R + S+LDTDEM+R+G+DLGATGRLQLMFKLAEG GL +P A
Sbjct: 431 VGNVTER---LDMNTSSLDTDEMDRSGIDLGATGRLQLMFKLAEGAGLAVP----QAAAN 483
Query: 248 AQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
A A P + P IATQCF+L+NMFDP TETNPTW ++RDDV++EC KHG
Sbjct: 484 ALLATAPQPAPVLQQQQTPSIATQCFILSNMFDPRTETNPTWATDVRDDVLDECAKHG 541
>gi|194758325|ref|XP_001961412.1| GF14957 [Drosophila ananassae]
gi|190615109|gb|EDV30633.1| GF14957 [Drosophila ananassae]
Length = 594
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/298 (73%), Positives = 247/298 (82%), Gaps = 7/298 (2%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+LSPEERDART+FC+QLSQR+R RDLEEFFSSVGKVRDVRLI CNKT+RFKGIAYIEF+D
Sbjct: 228 ELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLILCNKTKRFKGIAYIEFED 287
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
PESV LA+GL+GQ+LLG+PI+VQ TQAEKNR N P QP+ GPMRLY+GSLHFNIT
Sbjct: 288 PESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPMRLYVGSLHFNIT 347
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
EDMLRGIFEPFGKID IQL++D +TGRSKGYGFIT+H+ADDAKKA EQLNGFELAGR MK
Sbjct: 348 EDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLMK 407
Query: 188 VGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL 247
VG VT+R + S+LDTDEM+R G+DLGATGRLQLMFKLAEG GL +P AAA+AL
Sbjct: 408 VGNVTER---LDMNTSSLDTDEMDRTGIDLGATGRLQLMFKLAEGAGLAVPQAAANALLA 464
Query: 248 AQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
Q + S IATQCF+L+NMFDP TETNPTWD EIRDDV+EEC KHG
Sbjct: 465 TAPQPAPVQQQQQAPS----IATQCFILSNMFDPRTETNPTWDAEIRDDVLEECAKHG 518
>gi|198476543|ref|XP_001357388.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
gi|198137744|gb|EAL34457.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
Length = 625
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/298 (72%), Positives = 247/298 (82%), Gaps = 7/298 (2%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+LSPEERDART+FC+QLSQR+R RDLEEFFSSVGKVRDVRLITCNKT+RFKGIAYIEF+D
Sbjct: 258 ELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFED 317
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
PESV LA+GL+GQ+LLG+PI+VQ TQAEKNR N P QP+ GPMRLY+GSLHF+IT
Sbjct: 318 PESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKSHVGPMRLYVGSLHFDIT 377
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E+MLRGIFEPFGKID IQL++D +T RSKGYGFIT+H+A+DAKKA EQLNGFELAGRPMK
Sbjct: 378 EEMLRGIFEPFGKIDAIQLIMDTETNRSKGYGFITYHNAEDAKKALEQLNGFELAGRPMK 437
Query: 188 VGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL 247
VG VT+R + ++LDTDEM+R G+DLGATGRLQLMFKLAEG GL +P AAA+AL
Sbjct: 438 VGNVTER---LDMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGAGLAVPQAAANALLA 494
Query: 248 AQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
P IATQCF+L+NMFDP TETNPTWDVEIRDDV+EEC KHG
Sbjct: 495 TAPQPAPVQ----QQQATPSIATQCFILSNMFDPRTETNPTWDVEIRDDVLEECAKHG 548
>gi|195397963|ref|XP_002057597.1| GJ18017 [Drosophila virilis]
gi|194141251|gb|EDW57670.1| GJ18017 [Drosophila virilis]
Length = 599
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/298 (72%), Positives = 250/298 (83%), Gaps = 7/298 (2%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+LSPEERDART+FC+QLSQR+R RDLEEFFSSVGKVRDVRLITCNKT+RFKGIAYIEF+D
Sbjct: 233 ELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFED 292
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
PESV LA+GL+GQ+LLG+PI+VQ TQAEKNR + P QP+ GPMRLY+GSLHFNIT
Sbjct: 293 PESVALALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKAHTGPMRLYVGSLHFNIT 352
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
EDMLRGIFEPFGKID IQL++D +TGRSKGYGFIT+H+ADDAKKA EQLNGFELAGRPMK
Sbjct: 353 EDMLRGIFEPFGKIDVIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRPMK 412
Query: 188 VGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL 247
VG VT+R + S+LDTDEM+R+G+DLGATGRLQLMFKLAEG GL +P AAA+AL
Sbjct: 413 VGNVTER---LDMNTSSLDTDEMDRSGIDLGATGRLQLMFKLAEGAGLAVPQAAANALLA 469
Query: 248 AQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
Q + S IATQCF+L+NMFDP TETNPTWD ++R+DV++EC KHG
Sbjct: 470 TAPQPAPLQQQQQTPS----IATQCFILSNMFDPRTETNPTWDTDVREDVLDECAKHG 523
>gi|321472566|gb|EFX83536.1| hypothetical protein DAPPUDRAFT_194972 [Daphnia pulex]
Length = 366
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/300 (69%), Positives = 247/300 (82%), Gaps = 6/300 (2%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
++ EERDART+FCMQLSQRIR RDLEEFFS+VGKVRDVRLITCNKTRRFKG+ Y+EF +P
Sbjct: 1 MTVEERDARTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLITCNKTRRFKGLCYVEFAEP 60
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNR-AGNTLPNLQP--RGTGGPMRLYIGSLHFN 125
ESVPLA+ L GQ+L G+PI+VQPTQAEKNR AG+ +P + +G GPMRLY+GSLHFN
Sbjct: 61 ESVPLAIALTGQRLCGVPIVVQPTQAEKNRLAGSNMPAMSSFNKGPNGPMRLYVGSLHFN 120
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITEDMLR IFEPFGKI+++QLM+D +TGRSKGYGFITF +A+DAKKA EQLNGFELAGRP
Sbjct: 121 ITEDMLRSIFEPFGKIEHMQLMIDTETGRSKGYGFITFRNAEDAKKAMEQLNGFELAGRP 180
Query: 186 MKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL 245
MK+ VT E G + LD+DEM+RAG+DLGATGRLQLM KLA+GTGLE+P AA SAL
Sbjct: 181 MKINHVT---EHFTGNHTYLDSDEMDRAGIDLGATGRLQLMAKLAQGTGLEIPAAAQSAL 237
Query: 246 NLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
NL + +S APPIATQCF+L+NMFD ++ET+P W EI DDV++ECNKHG
Sbjct: 238 NLQASIQAAQQQALPVASVAPPIATQCFMLSNMFDSSSETHPLWHQEICDDVMDECNKHG 297
>gi|427792527|gb|JAA61715.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 497
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/306 (70%), Positives = 252/306 (82%), Gaps = 10/306 (3%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
DD++PEERD RT+FCMQLSQRIR RDLEEFFS+VGKVRDVRLI NKTRR KGIAY+EF+
Sbjct: 128 DDITPEERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEFQ 187
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRA----GNTLPNLQPRGTGGPMRLYIGSL 122
D ESVPLAMGLNGQKL GIPI+VQPTQAE+NRA +T + RG GPMRLY+GSL
Sbjct: 188 DVESVPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQNASTSNSTLQRGNVGPMRLYVGSL 247
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
HFNITE+ML+GIFEPFGKID I+L+ D +T RSKGYGFITFH ++DAKKA EQLNGFELA
Sbjct: 248 HFNITEEMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNGFELA 307
Query: 183 GRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAA 242
GRPMKVG VT+R + V PS LD++E++R+G+DLGATGRLQLM KLAEGTG ++P AA
Sbjct: 308 GRPMKVGHVTERTD-VSQAPSFLDSEELDRSGIDLGATGRLQLMAKLAEGTGFQIPQAAV 366
Query: 243 SALNLAQNAILNSSTPQ---VSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIE 299
+AL + N + PQ V+++ AP IATQCFLL+NMFDP TETNP+WD EIR DVIE
Sbjct: 367 NALQM--NPAVLPGQPQAAAVAAAAAPTIATQCFLLSNMFDPLTETNPSWDEEIRRDVIE 424
Query: 300 ECNKHG 305
EC KHG
Sbjct: 425 ECRKHG 430
>gi|427794973|gb|JAA62938.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 509
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/306 (70%), Positives = 252/306 (82%), Gaps = 10/306 (3%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
DD++PEERD RT+FCMQLSQRIR RDLEEFFS+VGKVRDVRLI NKTRR KGIAY+EF+
Sbjct: 140 DDITPEERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEFQ 199
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRA----GNTLPNLQPRGTGGPMRLYIGSL 122
D ESVPLAMGLNGQKL GIPI+VQPTQAE+NRA +T + RG GPMRLY+GSL
Sbjct: 200 DVESVPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQNASTSNSTLQRGNVGPMRLYVGSL 259
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
HFNITE+ML+GIFEPFGKID I+L+ D +T RSKGYGFITFH ++DAKKA EQLNGFELA
Sbjct: 260 HFNITEEMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNGFELA 319
Query: 183 GRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAA 242
GRPMKVG VT+R + V PS LD++E++R+G+DLGATGRLQLM KLAEGTG ++P AA
Sbjct: 320 GRPMKVGHVTERTD-VSQAPSFLDSEELDRSGIDLGATGRLQLMAKLAEGTGFQIPQAAV 378
Query: 243 SALNLAQNAILNSSTPQ---VSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIE 299
+AL + N + PQ V+++ AP IATQCFLL+NMFDP TETNP+WD EIR DVIE
Sbjct: 379 NALQM--NPAVLPGQPQAAAVAAAAAPTIATQCFLLSNMFDPLTETNPSWDEEIRRDVIE 436
Query: 300 ECNKHG 305
EC KHG
Sbjct: 437 ECRKHG 442
>gi|346465875|gb|AEO32782.1| hypothetical protein [Amblyomma maculatum]
Length = 558
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/308 (69%), Positives = 249/308 (80%), Gaps = 12/308 (3%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
DD++PEERD RT+FCMQLSQRIR RDLEEFFS+VGKVRDVRLI NKTRR KGIAY+EF
Sbjct: 187 DDITPEERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEFL 246
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRA----GNTLPNLQPRGTGGPMRLYIGSL 122
D ESVPLAMGLNGQKL GIPI+VQPTQAE+NRA +T + RG GPMRLY+GSL
Sbjct: 247 DVESVPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQNASTSSSTLQRGNVGPMRLYVGSL 306
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
HFNITEDML+GIFEPFGKID I+L+ D +T RSKGYGFITFH ++DAKKA EQLNGFELA
Sbjct: 307 HFNITEDMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNGFELA 366
Query: 183 GRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAA 242
GRPMKVG VT+R + V PS LD++E++R+G+DLGATGRLQLM KLAEGTG ++P AA
Sbjct: 367 GRPMKVGHVTERTD-VSQAPSFLDSEELDRSGIDLGATGRLQLMAKLAEGTGFQIPQAAV 425
Query: 243 SALNLAQNAILNSSTPQ-----VSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDV 297
+AL + + PQ +++ AP IATQCFLL+NMFDP TETNP+WD EIR DV
Sbjct: 426 NALQMNTTGL--PGQPQAAAVAAAAAAAPTIATQCFLLSNMFDPLTETNPSWDEEIRRDV 483
Query: 298 IEECNKHG 305
IEEC KHG
Sbjct: 484 IEECRKHG 491
>gi|312374824|gb|EFR22303.1| hypothetical protein AND_15459 [Anopheles darlingi]
Length = 560
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/299 (74%), Positives = 250/299 (83%), Gaps = 6/299 (2%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D++S E+RDART+FCMQLSQRIR RDLEEFFSSVGKVRDVRLITCNKT+RFKGIAYIEFK
Sbjct: 195 DEVSQEDRDARTVFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFK 254
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
DPESV LA+GL+GQ+LLGIPI VQ TQAEKNR N P P+ GPMRLY+GSLHFNI
Sbjct: 255 DPESVALALGLSGQRLLGIPISVQHTQAEKNRMANQPPPAPPKNPAGPMRLYVGSLHFNI 314
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNIQL++D DTGRSKGYGFITFH+ADDAKKA EQLNGFELAGRPM
Sbjct: 315 TEDMLRGIFEPFGKIDNIQLIMDTDTGRSKGYGFITFHNADDAKKALEQLNGFELAGRPM 374
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R + ++LDTDEM+R+G++LGATGRLQLMFKLAEG GL +P AAA AL
Sbjct: 375 KVGNVTERLDVTTH--ASLDTDEMDRSGIELGATGRLQLMFKLAEGAGLAVPRAAADALL 432
Query: 247 LAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
+ Q S IATQCFLL+NMFDP+TETNP WDVEI+DDVIEECNKHG
Sbjct: 433 ATAPQPIPQQPLQQSPP----IATQCFLLSNMFDPSTETNPNWDVEIQDDVIEECNKHG 487
>gi|405963791|gb|EKC29337.1| RNA-binding protein 39 [Crassostrea gigas]
Length = 557
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/316 (67%), Positives = 248/316 (78%), Gaps = 21/316 (6%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+L+PEERDART+FCMQLS RIR RDLEEFFSSVGKVRDVRLI NKTRR KGI+Y+EF+D
Sbjct: 154 ELTPEERDARTVFCMQLSARIRPRDLEEFFSSVGKVRDVRLIMDNKTRRSKGISYVEFQD 213
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
+SVPLA+GL QKLLG+PIIVQ +QAEKNR GN L +G GPMRLY+GSLHFNIT
Sbjct: 214 TDSVPLAIGLTNQKLLGVPIIVQHSQAEKNRVGNPTSILT-KGNIGPMRLYVGSLHFNIT 272
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E+MLRGIFEPFGKID+I+L+ D +T RS+GYGFITFH ++DAKKA EQLNGFELAGRPMK
Sbjct: 273 EEMLRGIFEPFGKIDDIKLIRDHETNRSQGYGFITFHDSEDAKKALEQLNGFELAGRPMK 332
Query: 188 VGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL 247
VG VT+R + G S LD+DEM+RAG+DLGATGRLQLM KLAEGTG ++P A SALN+
Sbjct: 333 VGHVTERQGEIQGA-SMLDSDEMDRAGIDLGATGRLQLMAKLAEGTGFQIPEYAVSALNI 391
Query: 248 AQ------------------NAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTW 289
Q +AIL S +TAPPIATQCF+L+NMFDP E+ +W
Sbjct: 392 TQQAPGVASAAPPAGPAPNVSAILGSQAAG-QDNTAPPIATQCFMLSNMFDPNAESRSSW 450
Query: 290 DVEIRDDVIEECNKHG 305
D EIRDDVIEECNKHG
Sbjct: 451 DQEIRDDVIEECNKHG 466
>gi|118100450|ref|XP_425690.2| PREDICTED: RNA-binding protein 39 [Gallus gallus]
gi|363741409|ref|XP_003642487.1| PREDICTED: RNA-binding protein 39-like [Gallus gallus]
Length = 522
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/310 (64%), Positives = 244/310 (78%), Gaps = 13/310 (4%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 203 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 261
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 262 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 321
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 322 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 380
Query: 247 LA-----------QNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRD 295
++ Q + + ++++ P+ATQCF L+NMF+P TE WD EI+D
Sbjct: 381 MSGSLAFGAVADLQTRLSQQNEVLAAAASVQPLATQCFQLSNMFNPQTEEEAGWDTEIKD 440
Query: 296 DVIEECNKHG 305
DVIEECNKHG
Sbjct: 441 DVIEECNKHG 450
>gi|126291195|ref|XP_001371651.1| PREDICTED: RNA-binding protein 39 isoform 1 [Monodelphis domestica]
Length = 524
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/312 (65%), Positives = 245/312 (78%), Gaps = 15/312 (4%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 203 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 261
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 262 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 321
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 322 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 380
Query: 247 LAQN------AILNSSTPQVSSSTA-------PPIATQCFLLANMFDPATETNPTWDVEI 293
++ + A L + Q S TA P+ATQCF L+NMF+P TE WD EI
Sbjct: 381 MSGSLAFGAVADLQTRLSQQSEVTALAAAASVQPLATQCFQLSNMFNPQTEDELGWDTEI 440
Query: 294 RDDVIEECNKHG 305
+DDVIEECNKHG
Sbjct: 441 KDDVIEECNKHG 452
>gi|224077247|ref|XP_002192236.1| PREDICTED: RNA-binding protein 39 [Taeniopygia guttata]
Length = 522
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/310 (64%), Positives = 244/310 (78%), Gaps = 13/310 (4%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 203 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 261
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 262 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 321
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 322 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 380
Query: 247 LA-----------QNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRD 295
++ Q + + ++++ P+ATQCF L+NMF+P TE WD EI+D
Sbjct: 381 MSGSLAFGAVTDLQTRLSQQNEVLAAAASVQPLATQCFQLSNMFNPQTEEEAGWDTEIKD 440
Query: 296 DVIEECNKHG 305
DVIEECNKHG
Sbjct: 441 DVIEECNKHG 450
>gi|327271618|ref|XP_003220584.1| PREDICTED: RNA-binding protein 39-like [Anolis carolinensis]
Length = 578
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/310 (64%), Positives = 244/310 (78%), Gaps = 13/310 (4%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 199 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 258
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 259 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 317
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 318 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 377
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 378 KVGHVTERTDASSAS-SFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 436
Query: 247 LA-----------QNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRD 295
++ Q + S ++++ P+ATQCF L+NMF+P TE WD EI+D
Sbjct: 437 MSGSLAFSAVADLQTRLSQQSEVLAAAASVQPLATQCFQLSNMFNPQTEEEAGWDTEIKD 496
Query: 296 DVIEECNKHG 305
DVIEECNKHG
Sbjct: 497 DVIEECNKHG 506
>gi|449265754|gb|EMC76900.1| RNA-binding protein 39, partial [Columba livia]
Length = 423
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/310 (64%), Positives = 244/310 (78%), Gaps = 13/310 (4%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 44 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 103
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 104 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 162
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 163 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 222
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 223 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 281
Query: 247 LA-----------QNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRD 295
++ Q + + ++++ P+ATQCF L+NMF+P TE WD EI+D
Sbjct: 282 MSGSLAFGAVADLQTRLSQQNEVLAAAASVQPLATQCFQLSNMFNPQTEEEAGWDTEIKD 341
Query: 296 DVIEECNKHG 305
DVIEECNKHG
Sbjct: 342 DVIEECNKHG 351
>gi|326931688|ref|XP_003211958.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like
[Meleagris gallopavo]
Length = 571
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/310 (64%), Positives = 244/310 (78%), Gaps = 13/310 (4%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 192 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 251
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 252 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 310
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 311 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 370
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 371 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 429
Query: 247 LA-----------QNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRD 295
++ Q + + ++++ P+ATQCF L+NMF+P TE WD EI+D
Sbjct: 430 MSGSLAFGAVADLQTRLSQQNEVLAAAASVQPLATQCFQLSNMFNPQTEEEAGWDTEIKD 489
Query: 296 DVIEECNKHG 305
DVIEECNKHG
Sbjct: 490 DVIEECNKHG 499
>gi|395505312|ref|XP_003756986.1| PREDICTED: RNA-binding protein 39 [Sarcophilus harrisii]
Length = 557
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/312 (65%), Positives = 245/312 (78%), Gaps = 15/312 (4%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 176 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 235
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 236 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 294
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 295 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 354
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 355 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 413
Query: 247 LAQN------AILNSSTPQVSSSTA-------PPIATQCFLLANMFDPATETNPTWDVEI 293
++ + A L + Q S TA P+ATQCF L+NMF+P TE WD EI
Sbjct: 414 MSGSLAFGAVADLQTRLSQQSEVTALAAAASVQPLATQCFQLSNMFNPQTEDELGWDTEI 473
Query: 294 RDDVIEECNKHG 305
+DDVIEECNKHG
Sbjct: 474 KDDVIEECNKHG 485
>gi|432101442|gb|ELK29624.1| RNA-binding protein 39 [Myotis davidii]
Length = 491
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/301 (65%), Positives = 245/301 (81%), Gaps = 4/301 (1%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 121 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 180
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 181 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 239
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 240 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 299
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 300 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 358
Query: 247 LAQNAILN--SSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKH 304
++ + +++ ++++ P+ATQCF L+NMF+P TE WD EI+DDVIEECNKH
Sbjct: 359 MSGSLAFGAVAASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKH 418
Query: 305 G 305
G
Sbjct: 419 G 419
>gi|336176066|ref|NP_001229529.1| RNA-binding protein 39 isoform d [Homo sapiens]
gi|73991836|ref|XP_865202.1| PREDICTED: RNA-binding protein 39 isoform 16 [Canis lupus
familiaris]
gi|296199705|ref|XP_002747280.1| PREDICTED: RNA-binding protein 39 isoform 3 [Callithrix jacchus]
gi|332858230|ref|XP_003316933.1| PREDICTED: uncharacterized protein LOC458443 isoform 3 [Pan
troglodytes]
gi|335304749|ref|XP_003360015.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719245|ref|XP_003363967.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|426391513|ref|XP_004062117.1| PREDICTED: RNA-binding protein 39 isoform 4 [Gorilla gorilla
gorilla]
Length = 502
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/313 (65%), Positives = 246/313 (78%), Gaps = 17/313 (5%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 121 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 180
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 181 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 239
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 240 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 299
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 300 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 358
Query: 246 ---NLAQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVE 292
+LA A+ + T ++S T P+ATQCF L+NMF+P TE WD E
Sbjct: 359 MSGSLAFGAVADLQT-RLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTE 417
Query: 293 IRDDVIEECNKHG 305
I+DDVIEECNKHG
Sbjct: 418 IKDDVIEECNKHG 430
>gi|194386804|dbj|BAG61212.1| unnamed protein product [Homo sapiens]
Length = 502
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/313 (65%), Positives = 246/313 (78%), Gaps = 17/313 (5%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 121 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 180
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 181 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 239
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 240 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 299
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 300 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 358
Query: 246 ---NLAQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVE 292
+LA A+ + T ++S T P+ATQCF L+NMF+P TE WD E
Sbjct: 359 MSGSLAFGAVADLQT-RLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTE 417
Query: 293 IRDDVIEECNKHG 305
I+DDVIEECNKHG
Sbjct: 418 IKDDVIEECNKHG 430
>gi|330688445|ref|NP_001193433.1| RNA-binding protein 39 [Bos taurus]
Length = 530
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/313 (65%), Positives = 246/313 (78%), Gaps = 17/313 (5%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 149 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 208
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 209 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 267
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 268 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 327
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 328 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 386
Query: 246 ---NLAQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVE 292
+LA A+ + T ++S T P+ATQCF L+NMF+P TE WD E
Sbjct: 387 MSGSLAFGAVADLQT-RLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTE 445
Query: 293 IRDDVIEECNKHG 305
I+DDVIEECNKHG
Sbjct: 446 IKDDVIEECNKHG 458
>gi|417411155|gb|JAA52027.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 491
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/313 (65%), Positives = 246/313 (78%), Gaps = 17/313 (5%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 110 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 169
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 170 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 228
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 229 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 288
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 289 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 347
Query: 246 ---NLAQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVE 292
+LA A+ + T ++S T P+ATQCF L+NMF+P TE WD E
Sbjct: 348 MSGSLAFGAVADLQT-RLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTE 406
Query: 293 IRDDVIEECNKHG 305
I+DDVIEECNKHG
Sbjct: 407 IKDDVIEECNKHG 419
>gi|88682991|gb|AAI05542.1| RBM39 protein [Bos taurus]
Length = 528
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/313 (65%), Positives = 246/313 (78%), Gaps = 17/313 (5%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 147 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 206
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 207 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 265
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 266 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 325
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 326 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 384
Query: 246 ---NLAQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVE 292
+LA A+ + T ++S T P+ATQCF L+NMF+P TE WD E
Sbjct: 385 MSGSLAFGAVADLQT-RLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTE 443
Query: 293 IRDDVIEECNKHG 305
I+DDVIEECNKHG
Sbjct: 444 IKDDVIEECNKHG 456
>gi|4757926|ref|NP_004893.1| RNA-binding protein 39 isoform b [Homo sapiens]
gi|197097940|ref|NP_001125339.1| RNA-binding protein 39 [Pongo abelii]
gi|149733223|ref|XP_001501876.1| PREDICTED: RNA-binding protein 39 isoform 2 [Equus caballus]
gi|194044529|ref|XP_001925282.1| PREDICTED: RNA-binding protein 39 isoform 2 [Sus scrofa]
gi|296199701|ref|XP_002747278.1| PREDICTED: RNA-binding protein 39 isoform 1 [Callithrix jacchus]
gi|301762104|ref|XP_002916459.1| PREDICTED: RNA-binding protein 39-like [Ailuropoda melanoleuca]
gi|332858226|ref|XP_514808.3| PREDICTED: uncharacterized protein LOC458443 isoform 5 [Pan
troglodytes]
gi|344279921|ref|XP_003411734.1| PREDICTED: RNA-binding protein 39 isoform 2 [Loxodonta africana]
gi|345789988|ref|XP_865124.2| PREDICTED: RNA-binding protein 39 isoform 12 [Canis lupus
familiaris]
gi|354477984|ref|XP_003501197.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Cricetulus
griseus]
gi|426391509|ref|XP_004062115.1| PREDICTED: RNA-binding protein 39 isoform 2 [Gorilla gorilla
gorilla]
gi|75070825|sp|Q5RC80.1|RBM39_PONAB RecName: Full=RNA-binding protein 39; AltName: Full=RNA-binding
motif protein 39
gi|405192|gb|AAA16346.1| splicing factor [Homo sapiens]
gi|55727753|emb|CAH90627.1| hypothetical protein [Pongo abelii]
gi|119596568|gb|EAW76162.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|119596569|gb|EAW76163.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|296480931|tpg|DAA23046.1| TPA: RNA binding motif protein 39 [Bos taurus]
gi|307686241|dbj|BAJ21051.1| RNA binding motif protein 39 [synthetic construct]
gi|344246681|gb|EGW02785.1| RNA-binding protein 39 [Cricetulus griseus]
gi|380783275|gb|AFE63513.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|383408127|gb|AFH27277.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|384939256|gb|AFI33233.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|410218748|gb|JAA06593.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255438|gb|JAA15686.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292902|gb|JAA25051.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350855|gb|JAA42031.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350863|gb|JAA42035.1| RNA binding motif protein 39 [Pan troglodytes]
Length = 524
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/313 (65%), Positives = 246/313 (78%), Gaps = 17/313 (5%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 203 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 261
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 262 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 321
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 322 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 380
Query: 246 ---NLAQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVE 292
+LA A+ + T ++S T P+ATQCF L+NMF+P TE WD E
Sbjct: 381 MSGSLAFGAVADLQT-RLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTE 439
Query: 293 IRDDVIEECNKHG 305
I+DDVIEECNKHG
Sbjct: 440 IKDDVIEECNKHG 452
>gi|74179655|dbj|BAE22477.1| unnamed protein product [Mus musculus]
Length = 521
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/313 (65%), Positives = 246/313 (78%), Gaps = 17/313 (5%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 140 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 199
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 200 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 258
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 259 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 318
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 319 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 377
Query: 246 ---NLAQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVE 292
+LA A+ + T ++S T P+ATQCF L+NMF+P TE WD E
Sbjct: 378 MSGSLAFGAVADLQT-RLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTE 436
Query: 293 IRDDVIEECNKHG 305
I+DDVIEECNKHG
Sbjct: 437 IKDDVIEECNKHG 449
>gi|61557287|ref|NP_001013225.1| RNA-binding protein 39 [Rattus norvegicus]
gi|392346874|ref|XP_003749654.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Rattus
norvegicus]
gi|60552170|gb|AAH91394.1| RNA binding motif protein 39 [Rattus norvegicus]
gi|74196119|dbj|BAE32977.1| unnamed protein product [Mus musculus]
gi|149030834|gb|EDL85861.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Rattus
norvegicus]
Length = 524
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/313 (65%), Positives = 246/313 (78%), Gaps = 17/313 (5%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 203 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 261
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 262 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 321
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 322 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 380
Query: 246 ---NLAQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVE 292
+LA A+ + T ++S T P+ATQCF L+NMF+P TE WD E
Sbjct: 381 MSGSLAFGAVADLQT-RLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTE 439
Query: 293 IRDDVIEECNKHG 305
I+DDVIEECNKHG
Sbjct: 440 IKDDVIEECNKHG 452
>gi|148674239|gb|EDL06186.1| RNA binding motif protein 39, isoform CRA_d [Mus musculus]
Length = 507
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/313 (65%), Positives = 246/313 (78%), Gaps = 17/313 (5%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 126 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 185
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 186 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 244
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 245 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 304
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 305 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 363
Query: 246 ---NLAQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVE 292
+LA A+ + T ++S T P+ATQCF L+NMF+P TE WD E
Sbjct: 364 MSGSLAFGAVADLQT-RLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTE 422
Query: 293 IRDDVIEECNKHG 305
I+DDVIEECNKHG
Sbjct: 423 IKDDVIEECNKHG 435
>gi|59858555|ref|NP_001012304.1| RNA-binding protein 39 [Danio rerio]
gi|27882534|gb|AAH44487.1| RNA binding motif protein 39a [Danio rerio]
gi|182892014|gb|AAI65689.1| Rbm39a protein [Danio rerio]
Length = 523
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/315 (64%), Positives = 246/315 (78%), Gaps = 18/315 (5%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAYIEF
Sbjct: 139 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRIISDRNSRRSKGIAYIEFV 198
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL+GQ+LLG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 199 DSTSVPLAIGLSGQRLLGVPIIVQASQAEKNRAAALANNLQ-KGSAGPMRLYVGSLHFNI 257
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+ID+IQLM+D +TGRSKGYGFITF A+ AKKA EQLNGFELAGRPM
Sbjct: 258 TEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITFSDAECAKKALEQLNGFELAGRPM 317
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 318 KVGHVTERTDASTAS-SFLDNDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 376
Query: 247 LAQNAI----------------LNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWD 290
++ + + +N T Q + + PIAT CF L+NMF+P +E + W+
Sbjct: 377 MSGSMVAMAAATAAMNPGLSFNINVPTNQALNLPSQPIATHCFQLSNMFNPNSENDHGWE 436
Query: 291 VEIRDDVIEECNKHG 305
+EI+DDVIEECNKHG
Sbjct: 437 IEIQDDVIEECNKHG 451
>gi|426241406|ref|XP_004014582.1| PREDICTED: RNA-binding protein 39 isoform 3 [Ovis aries]
Length = 502
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/313 (64%), Positives = 245/313 (78%), Gaps = 17/313 (5%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 121 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 180
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 181 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 239
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFEL GRPM
Sbjct: 240 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPM 299
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 300 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 358
Query: 246 ---NLAQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVE 292
+LA A+ + T ++S T P+ATQCF L+NMF+P TE WD E
Sbjct: 359 MSGSLAFGAVADLQT-RLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTE 417
Query: 293 IRDDVIEECNKHG 305
I+DDVIEECNKHG
Sbjct: 418 IKDDVIEECNKHG 430
>gi|426241410|ref|XP_004014584.1| PREDICTED: RNA-binding protein 39 isoform 5 [Ovis aries]
Length = 530
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/313 (64%), Positives = 245/313 (78%), Gaps = 17/313 (5%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 149 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 208
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 209 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 267
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFEL GRPM
Sbjct: 268 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPM 327
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 328 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 386
Query: 246 ---NLAQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVE 292
+LA A+ + T ++S T P+ATQCF L+NMF+P TE WD E
Sbjct: 387 MSGSLAFGAVADLQT-RLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTE 445
Query: 293 IRDDVIEECNKHG 305
I+DDVIEECNKHG
Sbjct: 446 IKDDVIEECNKHG 458
>gi|431894348|gb|ELK04148.1| RNA-binding protein 39 [Pteropus alecto]
Length = 601
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/313 (65%), Positives = 246/313 (78%), Gaps = 17/313 (5%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 220 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 279
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 280 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 338
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 339 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 398
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 399 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 457
Query: 246 ---NLAQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVE 292
+LA A+ + T ++S T P+ATQCF L+NMF+P TE WD E
Sbjct: 458 MSGSLAFGAVADLQT-RLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTE 516
Query: 293 IRDDVIEECNKHG 305
I+DDVIEECNKHG
Sbjct: 517 IKDDVIEECNKHG 529
>gi|126291198|ref|XP_001371677.1| PREDICTED: RNA-binding protein 39 isoform 2 [Monodelphis domestica]
Length = 533
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/321 (64%), Positives = 246/321 (76%), Gaps = 24/321 (7%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 203 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 261
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 262 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 321
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 322 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 380
Query: 246 ---NLAQNAI-----------LNSSTPQVSSSTA-------PPIATQCFLLANMFDPATE 284
+LA A+ L + Q S TA P+ATQCF L+NMF+P TE
Sbjct: 381 MSGSLAFGAVAAKIFFPFFIDLQTRLSQQSEVTALAAAASVQPLATQCFQLSNMFNPQTE 440
Query: 285 TNPTWDVEIRDDVIEECNKHG 305
WD EI+DDVIEECNKHG
Sbjct: 441 DELGWDTEIKDDVIEECNKHG 461
>gi|426241404|ref|XP_004014581.1| PREDICTED: RNA-binding protein 39 isoform 2 [Ovis aries]
Length = 524
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/313 (64%), Positives = 245/313 (78%), Gaps = 17/313 (5%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 203 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 261
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFEL GRPM
Sbjct: 262 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPM 321
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 322 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 380
Query: 246 ---NLAQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVE 292
+LA A+ + T ++S T P+ATQCF L+NMF+P TE WD E
Sbjct: 381 MSGSLAFGAVADLQT-RLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTE 439
Query: 293 IRDDVIEECNKHG 305
I+DDVIEECNKHG
Sbjct: 440 IKDDVIEECNKHG 452
>gi|336176064|ref|NP_001229528.1| RNA-binding protein 39 isoform c [Homo sapiens]
gi|296199707|ref|XP_002747281.1| PREDICTED: RNA-binding protein 39 isoform 4 [Callithrix jacchus]
gi|332858228|ref|XP_003316932.1| PREDICTED: uncharacterized protein LOC458443 isoform 2 [Pan
troglodytes]
gi|335304745|ref|XP_003360013.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719242|ref|XP_003363966.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|345789990|ref|XP_003433300.1| PREDICTED: RNA-binding protein 39 [Canis lupus familiaris]
gi|426391511|ref|XP_004062116.1| PREDICTED: RNA-binding protein 39 isoform 3 [Gorilla gorilla
gorilla]
gi|124297482|gb|AAI31544.1| RBM39 protein [Homo sapiens]
gi|194389138|dbj|BAG61586.1| unnamed protein product [Homo sapiens]
Length = 508
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/318 (63%), Positives = 244/318 (76%), Gaps = 21/318 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 121 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 180
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 181 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 239
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 240 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 299
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 300 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 358
Query: 247 L---------AQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNP 287
+ A+ + + ++S T P+ATQCF L+NMF+P TE
Sbjct: 359 MSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEV 418
Query: 288 TWDVEIRDDVIEECNKHG 305
WD EI+DDVIEECNKHG
Sbjct: 419 GWDTEIKDDVIEECNKHG 436
>gi|417411216|gb|JAA52053.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 499
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/318 (64%), Positives = 245/318 (77%), Gaps = 21/318 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 112 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 171
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 172 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 230
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 231 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 290
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 291 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 349
Query: 246 ---NLAQNAILNSS-----TPQVSSST----------APPIATQCFLLANMFDPATETNP 287
+LA A+ S ++S T P+ATQCF L+NMF+P TE
Sbjct: 350 MSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEV 409
Query: 288 TWDVEIRDDVIEECNKHG 305
WD EI+DDVIEECNKHG
Sbjct: 410 GWDTEIKDDVIEECNKHG 427
>gi|296199709|ref|XP_002747282.1| PREDICTED: RNA-binding protein 39 isoform 5 [Callithrix jacchus]
Length = 504
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/318 (63%), Positives = 244/318 (76%), Gaps = 21/318 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 117 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 176
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 177 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 235
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 236 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 295
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 296 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 354
Query: 247 L---------AQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNP 287
+ A+ + + ++S T P+ATQCF L+NMF+P TE
Sbjct: 355 MSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEV 414
Query: 288 TWDVEIRDDVIEECNKHG 305
WD EI+DDVIEECNKHG
Sbjct: 415 GWDTEIKDDVIEECNKHG 432
>gi|194386036|dbj|BAG59582.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/318 (63%), Positives = 244/318 (76%), Gaps = 21/318 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 116 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 175
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 176 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 234
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 235 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 294
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 295 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 353
Query: 247 L---------AQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNP 287
+ A+ + + ++S T P+ATQCF L+NMF+P TE
Sbjct: 354 MSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEV 413
Query: 288 TWDVEIRDDVIEECNKHG 305
WD EI+DDVIEECNKHG
Sbjct: 414 GWDTEIKDDVIEECNKHG 431
>gi|194384132|dbj|BAG64839.1| unnamed protein product [Homo sapiens]
Length = 521
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/318 (64%), Positives = 245/318 (77%), Gaps = 21/318 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 134 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 193
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 194 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 252
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 253 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 312
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 313 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 371
Query: 246 ---NLAQNAILNSS-----TPQVSSST----------APPIATQCFLLANMFDPATETNP 287
+LA A+ S ++S T P+ATQCF L+NMF+P TE
Sbjct: 372 MSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEV 431
Query: 288 TWDVEIRDDVIEECNKHG 305
WD EI+DDVIEECNKHG
Sbjct: 432 GWDTEIKDDVIEECNKHG 449
>gi|52545994|emb|CAH18281.2| hypothetical protein [Homo sapiens]
Length = 513
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/318 (64%), Positives = 245/318 (77%), Gaps = 21/318 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 126 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 185
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 186 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 244
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 245 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 304
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 305 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 363
Query: 246 ---NLAQNAILNSS-----TPQVSSST----------APPIATQCFLLANMFDPATETNP 287
+LA A+ S ++S T P+ATQCF L+NMF+P TE
Sbjct: 364 MSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEV 423
Query: 288 TWDVEIRDDVIEECNKHG 305
WD EI+DDVIEECNKHG
Sbjct: 424 GWDTEIKDDVIEECNKHG 441
>gi|193785136|dbj|BAG54289.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/318 (63%), Positives = 244/318 (76%), Gaps = 21/318 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 119 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 178
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 179 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 237
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 238 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 297
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 298 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 356
Query: 247 L---------AQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNP 287
+ A+ + + ++S T P+ATQCF L+NMF+P TE
Sbjct: 357 MSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEV 416
Query: 288 TWDVEIRDDVIEECNKHG 305
WD EI+DDVIEECNKHG
Sbjct: 417 GWDTEIKDDVIEECNKHG 434
>gi|62857615|ref|NP_001016788.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|62201342|gb|AAH93451.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|89273890|emb|CAJ83908.1| RNA-binding region (RNP1, RRM) containing 2 [Xenopus (Silurana)
tropicalis]
Length = 542
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/329 (62%), Positives = 245/329 (74%), Gaps = 32/329 (9%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 144 DNLSPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 203
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQK+LG+PIIVQ +QAEKNRA NLQ +GT GPMRLY+GSLHFNI
Sbjct: 204 DQSSVPLAIGLTGQKVLGVPIIVQASQAEKNRAAAMANNLQ-KGTAGPMRLYVGSLHFNI 262
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 263 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 322
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 323 KVGHVTERTDA-SNASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 381
Query: 247 LAQN------AILNSSTPQVSS------------------------STAPPIATQCFLLA 276
++ + A L + Q S +T PIATQCF L+
Sbjct: 382 MSGSLAFGAVADLQTRISQQSEALAAAAASAATISLAAASSTLPIPATTQPIATQCFQLS 441
Query: 277 NMFDPATETNPTWDVEIRDDVIEECNKHG 305
NMF+P TE WD EI++DVIEECNKHG
Sbjct: 442 NMFNPQTEDELGWDSEIKEDVIEECNKHG 470
>gi|281346065|gb|EFB21649.1| hypothetical protein PANDA_004543 [Ailuropoda melanoleuca]
Length = 497
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/318 (64%), Positives = 245/318 (77%), Gaps = 21/318 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 110 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 169
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 170 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 228
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 229 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 288
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 289 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 347
Query: 246 ---NLAQNAILNSS-----TPQVSSST----------APPIATQCFLLANMFDPATETNP 287
+LA A+ S ++S T P+ATQCF L+NMF+P TE
Sbjct: 348 MSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEV 407
Query: 288 TWDVEIRDDVIEECNKHG 305
WD EI+DDVIEECNKHG
Sbjct: 408 GWDTEIKDDVIEECNKHG 425
>gi|184185564|gb|ACC68962.1| RNA binding motif protein 39 isoform a (predicted) [Rhinolophus
ferrumequinum]
Length = 498
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/318 (64%), Positives = 245/318 (77%), Gaps = 21/318 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 203 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 261
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 262 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 321
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 322 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 380
Query: 246 ---NLAQNAILNSS-----TPQVSSST----------APPIATQCFLLANMFDPATETNP 287
+LA A+ S ++S T P+ATQCF L+NMF+P TE
Sbjct: 381 MSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEV 440
Query: 288 TWDVEIRDDVIEECNKHG 305
WD EI+DDVIEECNKHG
Sbjct: 441 GWDTEIKDDVIEECNKHG 458
>gi|35493811|ref|NP_909122.1| RNA-binding protein 39 isoform a [Homo sapiens]
gi|281182530|ref|NP_001162566.1| RNA-binding protein 39 [Papio anubis]
gi|284004921|ref|NP_001164806.1| RNA-binding protein 39 [Oryctolagus cuniculus]
gi|149733225|ref|XP_001501869.1| PREDICTED: RNA-binding protein 39 isoform 1 [Equus caballus]
gi|296199703|ref|XP_002747279.1| PREDICTED: RNA-binding protein 39 isoform 2 [Callithrix jacchus]
gi|332858224|ref|XP_003316931.1| PREDICTED: uncharacterized protein LOC458443 isoform 1 [Pan
troglodytes]
gi|335304742|ref|XP_003360012.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|344279919|ref|XP_003411733.1| PREDICTED: RNA-binding protein 39 isoform 1 [Loxodonta africana]
gi|345789986|ref|XP_864959.2| PREDICTED: RNA-binding protein 39 isoform 3 [Canis lupus
familiaris]
gi|354477982|ref|XP_003501196.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Cricetulus
griseus]
gi|397523808|ref|XP_003831910.1| PREDICTED: RNA-binding protein 39 [Pan paniscus]
gi|426391507|ref|XP_004062114.1| PREDICTED: RNA-binding protein 39 isoform 1 [Gorilla gorilla
gorilla]
gi|28201880|sp|Q14498.2|RBM39_HUMAN RecName: Full=RNA-binding protein 39; AltName: Full=Hepatocellular
carcinoma protein 1; AltName: Full=RNA-binding motif
protein 39; AltName: Full=RNA-binding region-containing
protein 2; AltName: Full=Splicing factor HCC1
gi|405194|gb|AAA16347.1| splicing factor [Homo sapiens]
gi|119596565|gb|EAW76159.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|119596567|gb|EAW76161.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|146327034|gb|AAI41836.1| RNA binding motif protein 39 [Homo sapiens]
gi|164623752|gb|ABY64678.1| RNA binding motif protein 39, isoform 1 (predicted) [Papio anubis]
gi|165971473|gb|AAI58173.1| RNA binding motif protein 39 [Homo sapiens]
gi|166831598|gb|ABY90123.1| RNA binding motif protein 39 isoform a (predicted) [Callithrix
jacchus]
gi|169731519|gb|ACA64891.1| RNA binding motif protein 39 isoform a (predicted) [Callicebus
moloch]
gi|197215647|gb|ACH53039.1| RNA binding motif protein 39 isoform a (predicted) [Otolemur
garnettii]
gi|217038339|gb|ACJ76632.1| RNA binding motif protein 39 isoform a (predicted) [Oryctolagus
cuniculus]
gi|229368730|gb|ACQ63013.1| RNA binding motif protein 39 isoform a (predicted) [Dasypus
novemcinctus]
gi|351702535|gb|EHB05454.1| RNA-binding protein 39 [Heterocephalus glaber]
gi|380783277|gb|AFE63514.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|383408125|gb|AFH27276.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|384939254|gb|AFI33232.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|410218746|gb|JAA06592.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255434|gb|JAA15684.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292900|gb|JAA25050.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292904|gb|JAA25052.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350859|gb|JAA42033.1| RNA binding motif protein 39 [Pan troglodytes]
gi|440902514|gb|ELR53299.1| RNA-binding protein 39 [Bos grunniens mutus]
Length = 530
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/318 (63%), Positives = 244/318 (76%), Gaps = 21/318 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 203 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 261
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 262 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 321
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 322 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 380
Query: 247 L---------AQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNP 287
+ A+ + + ++S T P+ATQCF L+NMF+P TE
Sbjct: 381 MSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEV 440
Query: 288 TWDVEIRDDVIEECNKHG 305
WD EI+DDVIEECNKHG
Sbjct: 441 GWDTEIKDDVIEECNKHG 458
>gi|118403314|ref|NP_573505.2| RNA-binding protein 39 [Mus musculus]
gi|392346872|ref|XP_003749653.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Rattus
norvegicus]
gi|341941811|sp|Q8VH51.2|RBM39_MOUSE RecName: Full=RNA-binding protein 39; AltName: Full=Coactivator of
activating protein 1 and estrogen receptors;
Short=Coactivator of AP-1 and ERs; AltName:
Full=RNA-binding motif protein 39; AltName:
Full=RNA-binding region-containing protein 2; AltName:
Full=Transcription coactivator CAPER
gi|55991480|gb|AAH86645.1| RNA binding motif protein 39 [Mus musculus]
gi|74151058|dbj|BAE27657.1| unnamed protein product [Mus musculus]
gi|148674237|gb|EDL06184.1| RNA binding motif protein 39, isoform CRA_b [Mus musculus]
Length = 530
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/318 (63%), Positives = 244/318 (76%), Gaps = 21/318 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 203 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 261
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 262 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 321
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 322 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 380
Query: 247 L---------AQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNP 287
+ A+ + + ++S T P+ATQCF L+NMF+P TE
Sbjct: 381 MSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEV 440
Query: 288 TWDVEIRDDVIEECNKHG 305
WD EI+DDVIEECNKHG
Sbjct: 441 GWDTEIKDDVIEECNKHG 458
>gi|13278367|gb|AAH04000.1| Rbm39 protein [Mus musculus]
Length = 429
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/318 (63%), Positives = 244/318 (76%), Gaps = 21/318 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 42 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 101
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 102 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 160
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 161 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 220
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 221 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 279
Query: 247 L---------AQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNP 287
+ A+ + + ++S T P+ATQCF L+NMF+P TE
Sbjct: 280 MSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEV 339
Query: 288 TWDVEIRDDVIEECNKHG 305
WD EI+DDVIEECNKHG
Sbjct: 340 GWDTEIKDDVIEECNKHG 357
>gi|426241408|ref|XP_004014583.1| PREDICTED: RNA-binding protein 39 isoform 4 [Ovis aries]
Length = 508
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/318 (62%), Positives = 243/318 (76%), Gaps = 21/318 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 121 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 180
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 181 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 239
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFEL GRPM
Sbjct: 240 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPM 299
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 300 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 358
Query: 247 L---------AQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNP 287
+ A+ + + ++S T P+ATQCF L+NMF+P TE
Sbjct: 359 MSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEV 418
Query: 288 TWDVEIRDDVIEECNKHG 305
WD EI+DDVIEECNKHG
Sbjct: 419 GWDTEIKDDVIEECNKHG 436
>gi|355784531|gb|EHH65382.1| RNA-binding motif protein 39 [Macaca fascicularis]
Length = 530
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/318 (64%), Positives = 245/318 (77%), Gaps = 21/318 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYMEFV 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 203 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 261
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 262 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 321
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 322 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 380
Query: 246 ---NLAQNAILNSS-----TPQVSSST----------APPIATQCFLLANMFDPATETNP 287
+LA A+ S ++S T P+ATQCF L+NMF+P TE
Sbjct: 381 MSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEV 440
Query: 288 TWDVEIRDDVIEECNKHG 305
WD EI+DDVIEECNKHG
Sbjct: 441 GWDTEIKDDVIEECNKHG 458
>gi|147900472|ref|NP_001086350.1| MGC81970 protein [Xenopus laevis]
gi|49522239|gb|AAH75146.1| MGC81970 protein [Xenopus laevis]
Length = 512
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/327 (62%), Positives = 245/327 (74%), Gaps = 30/327 (9%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERD+RT+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 116 DNLSPEERDSRTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 175
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +GT GPMRLY+GSLHFNI
Sbjct: 176 DQSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAALANNLQ-KGTAGPMRLYVGSLHFNI 234
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 235 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 294
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 295 KVGHVTERTDASNAS-SFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 353
Query: 247 LA-----------QNAILNSS-----------------TPQVSSSTAPPIATQCFLLANM 278
++ Q I S +P + +T PIATQCF L+NM
Sbjct: 354 MSGSLAFGAVADLQTRISQQSEALAAAAASAATISLAQSPLPTPATTQPIATQCFQLSNM 413
Query: 279 FDPATETNPTWDVEIRDDVIEECNKHG 305
F+P TE WD EI++DV+EECNKHG
Sbjct: 414 FNPQTEDELGWDSEIKEDVMEECNKHG 440
>gi|426241402|ref|XP_004014580.1| PREDICTED: RNA-binding protein 39 isoform 1 [Ovis aries]
Length = 530
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/318 (62%), Positives = 243/318 (76%), Gaps = 21/318 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 203 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 261
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFEL GRPM
Sbjct: 262 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPM 321
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 322 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 380
Query: 247 L---------AQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNP 287
+ A+ + + ++S T P+ATQCF L+NMF+P TE
Sbjct: 381 MSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEV 440
Query: 288 TWDVEIRDDVIEECNKHG 305
WD EI+DDVIEECNKHG
Sbjct: 441 GWDTEIKDDVIEECNKHG 458
>gi|148226721|ref|NP_001086950.1| RNA binding motif protein 39 [Xenopus laevis]
gi|50414893|gb|AAH77813.1| Rnpc2-prov protein [Xenopus laevis]
Length = 540
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/329 (62%), Positives = 245/329 (74%), Gaps = 32/329 (9%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERD+RT+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 142 DNLSPEERDSRTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFL 201
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQK+LG+PIIVQ +QAEKNRA NLQ +GT GPMRLY+GSLHFNI
Sbjct: 202 DQSSVPLAIGLTGQKVLGVPIIVQASQAEKNRAAALANNLQ-KGTAGPMRLYVGSLHFNI 260
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 261 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 320
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 321 KVGHVTERTDA-SNASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 379
Query: 247 LAQN------AILNSSTPQVSS------------------------STAPPIATQCFLLA 276
++ + A L + Q S +T PIATQCF L+
Sbjct: 380 MSGSLAFGAVADLQTRISQQSEALAAAAAAASAASITLASATLPIPATTQPIATQCFQLS 439
Query: 277 NMFDPATETNPTWDVEIRDDVIEECNKHG 305
NMF+P TE WD EI++DVIEECNKHG
Sbjct: 440 NMFNPQTEDELGWDSEIKEDVIEECNKHG 468
>gi|410953912|ref|XP_003983612.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39 [Felis
catus]
Length = 523
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/313 (64%), Positives = 245/313 (78%), Gaps = 18/313 (5%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEK RA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 203 DVSSVPLAIGLTGQRVLGVPIIVQASQAEK-RAAAMANNLQ-KGSAGPMRLYVGSLHFNI 260
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 261 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 320
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 321 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 379
Query: 246 ---NLAQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVE 292
+LA A+ + T ++S T P+ATQCF L+NMF+P TE WD E
Sbjct: 380 MSGSLAFGAVADLQT-RLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTE 438
Query: 293 IRDDVIEECNKHG 305
I+DDVIEECNKHG
Sbjct: 439 IKDDVIEECNKHG 451
>gi|410899827|ref|XP_003963398.1| PREDICTED: RNA-binding protein 39-like [Takifugu rubripes]
Length = 500
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/309 (64%), Positives = 242/309 (78%), Gaps = 12/309 (3%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAYIEF
Sbjct: 122 DNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEFV 181
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ SVPLA+GL GQ+LLG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 182 ESSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQ-KGSSGPMRLYVGSLHFNI 240
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE+MLRGIFEPFGKI+ IQLM+D +TGRSKGYGFI+F A+ AKKA EQLNGFELAGRPM
Sbjct: 241 TEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPM 300
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R++S S LD DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 301 KVGHVTERSDSSTAS-SILDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQ 359
Query: 247 LAQN----------AILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDD 296
+ + A+ S Q + A P+AT C L+N+F+P E +P+W VEI+DD
Sbjct: 360 MTGSMSFPTISGPPAVPTPSPSQALNLPAQPLATHCLQLSNLFNPQAENDPSWAVEIQDD 419
Query: 297 VIEECNKHG 305
VIEECNKHG
Sbjct: 420 VIEECNKHG 428
>gi|17063213|gb|AAL32373.1| transcription coactivator CAPER [Mus musculus]
Length = 530
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/318 (62%), Positives = 243/318 (76%), Gaps = 21/318 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR +GIAY+EF
Sbjct: 143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFV 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SV LA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 203 DVSSVRLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 261
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 262 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 321
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 322 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 380
Query: 247 L---------AQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNP 287
+ A+ + + ++S T P+ATQCF L+NMF+P TE
Sbjct: 381 MSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEV 440
Query: 288 TWDVEIRDDVIEECNKHG 305
WD EI+DDVIEECNKHG
Sbjct: 441 GWDTEIKDDVIEECNKHG 458
>gi|62122939|ref|NP_001014392.1| RNA binding motif protein 39b [Danio rerio]
gi|61402832|gb|AAH91794.1| RNA binding motif protein 39b [Danio rerio]
Length = 539
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/323 (62%), Positives = 241/323 (74%), Gaps = 20/323 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 157 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYVEFV 216
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA LQ RG GPMRLY+GSLHFNI
Sbjct: 217 DSTSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMASMLQ-RGGAGPMRLYVGSLHFNI 275
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKI+ IQLM+D +TGRSKGYGFI+F A+ AKKA EQLNGFELAGRPM
Sbjct: 276 TEDMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPM 335
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R+++ S LD DE+ER G+DLG TGRLQLM +LAEGTGL++P AA AL
Sbjct: 336 KVGHVTERSDASSAS-SFLDNDELERTGIDLGTTGRLQLMARLAEGTGLQIPAAAKQALQ 394
Query: 247 LAQNAILN-----SSTP---------QVSSSTAPPIATQCFLLANMFDPATETNPTWDVE 292
++ + S+TP Q + P+AT C L+NMF+P E P WD+E
Sbjct: 395 MSGSVSFGNMPNASATPPLIPNPGMNQAMNLPTQPLATHCLQLSNMFNPQMENEPGWDIE 454
Query: 293 IRDDVIEECNKHGVGASTVCFIY 315
IRDDVIEEC KHG V IY
Sbjct: 455 IRDDVIEECRKHG----GVIHIY 473
>gi|209155056|gb|ACI33760.1| RNA-binding protein 39 [Salmo salar]
Length = 535
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/320 (62%), Positives = 239/320 (74%), Gaps = 23/320 (7%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAYIEF
Sbjct: 146 DNLTPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYIEFL 205
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ SVPLA+GL GQ+LLG+PIIVQ +QAEKNRA NLQ +G GPMRLY+GSLHFNI
Sbjct: 206 EANSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAMANNLQ-KGNAGPMRLYVGSLHFNI 264
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +T RSKGYGFI+F A+ AKKA EQLNGFELAGRPM
Sbjct: 265 TEDMLRGIFEPFGRIESIQLMMDSETARSKGYGFISFADAECAKKALEQLNGFELAGRPM 324
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R +S S LD DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 325 KVGNVTERTDSSTAS-SFLDNDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 383
Query: 247 L---------------AQNAILN------SSTPQVSSSTAPPIATQCFLLANMFDPATET 285
+ A AI N S Q + P+AT C L+NMF P +E
Sbjct: 384 MSGSMHSSSIHFGNMAAGTAIANPALNLGPSMNQAMNLPTQPLATHCLQLSNMFSPQSEN 443
Query: 286 NPTWDVEIRDDVIEECNKHG 305
P WD+EI+DDV+EECNKHG
Sbjct: 444 EPGWDIEIQDDVMEECNKHG 463
>gi|47223170|emb|CAG11305.1| unnamed protein product [Tetraodon nigroviridis]
Length = 515
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/309 (64%), Positives = 242/309 (78%), Gaps = 12/309 (3%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAYIEF
Sbjct: 137 DNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEFV 196
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ SVPLA+GL GQ+LLG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 197 ESSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQ-KGSSGPMRLYVGSLHFNI 255
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE+MLRGIFEPFGKI+ IQLM+D +TGRSKGYGFI+F A+ AKKA EQLNGFELAGRPM
Sbjct: 256 TEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPM 315
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R++S S LD DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 316 KVGHVTERSDSSTAS-SILDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQ 374
Query: 247 LAQN----------AILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDD 296
+ + A+ S Q + A P+AT C L+N+F+P E +P+W VEI+DD
Sbjct: 375 MTGSMSFPTIGGPPAVPTPSPSQALNLPAQPLATHCLQLSNLFNPQAENDPSWAVEIQDD 434
Query: 297 VIEECNKHG 305
VIEECNKHG
Sbjct: 435 VIEECNKHG 443
>gi|432865706|ref|XP_004070573.1| PREDICTED: RNA-binding protein 39-like [Oryzias latipes]
Length = 516
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/308 (65%), Positives = 241/308 (78%), Gaps = 11/308 (3%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAYIEF
Sbjct: 139 DNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEFV 198
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ SVPLA+GL GQ+LLG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 199 ETSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQ-KGSAGPMRLYVGSLHFNI 257
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE+MLRGIFEPFGKI+ IQLM+D +TGRSKGYGFI+F A+ AKKA EQLNGFELAGRPM
Sbjct: 258 TEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPM 317
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R++S S LD DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 318 KVGHVTERSDS-STASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQ 376
Query: 246 --------NLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDV 297
N+A AI + Q + + P+AT C L+N+FDP E +P W EI+DDV
Sbjct: 377 MTGSIPFGNMAAPAIPTPAPSQALNLPSQPLATHCLQLSNLFDPQAENDPAWASEIQDDV 436
Query: 298 IEECNKHG 305
IEECNKHG
Sbjct: 437 IEECNKHG 444
>gi|432858814|ref|XP_004068952.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Oryzias latipes]
Length = 502
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/320 (63%), Positives = 244/320 (76%), Gaps = 25/320 (7%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
+D+L+PEERD RT+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAYIEF
Sbjct: 115 NDNLTPEERDGRTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEF 174
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLP--NLQPRGTGGPMRLYIGSLH 123
+ SVPLA+GL GQ+LLG+PIIVQ +QAEKNRA NLQ RG GPMRLY+GSLH
Sbjct: 175 VEASSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAANNLQ-RGLTGPMRLYVGSLH 233
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
FNITEDMLRGIFEPFG+I+NIQLM+D +TGRSKGYGFITF A+ AKKA EQLNGFELAG
Sbjct: 234 FNITEDMLRGIFEPFGRIENIQLMMDSETGRSKGYGFITFSDAECAKKALEQLNGFELAG 293
Query: 184 RPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAA-- 241
RPMKVG VT+R + PS LD DE+ER+G+DLG TGRLQLM +LAEGTGL++PPAA
Sbjct: 294 RPMKVGHVTERTDP-SSAPSILDNDELERSGIDLGTTGRLQLMARLAEGTGLQIPPAAQQ 352
Query: 242 ----------------ASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATET 285
++A+N + N +NS + S P+AT CF L+NMF+P++E
Sbjct: 353 ALQMSGAIAIGAMAAVSAAMNPSLNVNMNSGALNLPSQ---PLATHCFQLSNMFNPSSEN 409
Query: 286 NPTWDVEIRDDVIEECNKHG 305
W+V+I+ DVIEECNKHG
Sbjct: 410 TFGWEVDIQRDVIEECNKHG 429
>gi|260834973|ref|XP_002612484.1| hypothetical protein BRAFLDRAFT_214383 [Branchiostoma floridae]
gi|229297861|gb|EEN68493.1| hypothetical protein BRAFLDRAFT_214383 [Branchiostoma floridae]
Length = 466
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/319 (63%), Positives = 232/319 (72%), Gaps = 24/319 (7%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
LSPEERD RT+F MQLSQR+R +DLE+FFSSVGKVR+VRLI +RR KGIAY EF D
Sbjct: 39 LSPEERDQRTVFVMQLSQRVRPKDLEDFFSSVGKVREVRLIADRNSRRHKGIAYCEFTDA 98
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
VP+A+GL QKLLG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNITE
Sbjct: 99 SCVPMAIGLTNQKLLGVPIIVQASQAEKNRAAANSQNLQ-KGSSGPMRLYVGSLHFNITE 157
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
DMLRGIFEPFGKIDNIQLM D +TGRSKGYGFITFH A+ AKKA EQLNGFELAGRPMKV
Sbjct: 158 DMLRGIFEPFGKIDNIQLMKDSETGRSKGYGFITFHDAECAKKALEQLNGFELAGRPMKV 217
Query: 189 GTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLA 248
G VT+R+++ G S LD+DE+ER G++L TGRLQLM KLAEGTG E+P AA SALN+
Sbjct: 218 GHVTERSDA-GAATSFLDSDELERTGIELSTTGRLQLMAKLAEGTGFEMPAAAQSALNMP 276
Query: 249 QNAILNSST-PQVSSSTAPP---------------------IATQCFLLANMFDPATETN 286
++ T P A P AT CF L+NMFD E
Sbjct: 277 MASLTGLPTLPGAGPGVAAPAGVMPAAGQQQPPPPPVPIPAYATPCFQLSNMFDIKMENA 336
Query: 287 PTWDVEIRDDVIEECNKHG 305
P WD+EIR+DV+EEC KHG
Sbjct: 337 PNWDMEIRNDVVEECTKHG 355
>gi|209154564|gb|ACI33514.1| RNA-binding protein 39 [Salmo salar]
Length = 525
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/316 (62%), Positives = 244/316 (77%), Gaps = 20/316 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAYIEF
Sbjct: 140 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFV 199
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQ--AEKNRAGNTLPNLQPRGTGGPMRLYIGSLHF 124
+ SVPLA+GL+GQ+LLG+PIIVQ +Q AEKNRA NLQ +G GPMRLY+GSLHF
Sbjct: 200 EANSVPLAIGLSGQRLLGVPIIVQASQVMAEKNRAAAMANNLQ-KGNAGPMRLYVGSLHF 258
Query: 125 NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
NITE+MLRGIFEPFGKI++IQLM+D +TGRSKGYGFITF + AKKA +QLNGFELAGR
Sbjct: 259 NITEEMLRGIFEPFGKIESIQLMMDSETGRSKGYGFITFSDTECAKKALDQLNGFELAGR 318
Query: 185 PMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASA 244
PMKVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA A
Sbjct: 319 PMKVGHVTERTDASTAS-SFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQA 377
Query: 245 LNLAQNAILNSSTPQVSSST---------------APPIATQCFLLANMFDPATETNPTW 289
L ++ + + VS++ + P+AT CF L+NMF+P +E NP W
Sbjct: 378 LQMSGAIAIGAMA-AVSAAMNPAMNMNMNTAMNLPSQPLATHCFQLSNMFNPQSEDNPDW 436
Query: 290 DVEIRDDVIEECNKHG 305
DV+I+ DVIEECNKHG
Sbjct: 437 DVDIQHDVIEECNKHG 452
>gi|432858816|ref|XP_004068953.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Oryzias latipes]
Length = 529
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/320 (63%), Positives = 244/320 (76%), Gaps = 25/320 (7%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
+D+L+PEERD RT+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAYIEF
Sbjct: 142 NDNLTPEERDGRTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEF 201
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLP--NLQPRGTGGPMRLYIGSLH 123
+ SVPLA+GL GQ+LLG+PIIVQ +QAEKNRA NLQ RG GPMRLY+GSLH
Sbjct: 202 VEASSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAANNLQ-RGLTGPMRLYVGSLH 260
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
FNITEDMLRGIFEPFG+I+NIQLM+D +TGRSKGYGFITF A+ AKKA EQLNGFELAG
Sbjct: 261 FNITEDMLRGIFEPFGRIENIQLMMDSETGRSKGYGFITFSDAECAKKALEQLNGFELAG 320
Query: 184 RPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAA-- 241
RPMKVG VT+R + PS LD DE+ER+G+DLG TGRLQLM +LAEGTGL++PPAA
Sbjct: 321 RPMKVGHVTERTDP-SSAPSILDNDELERSGIDLGTTGRLQLMARLAEGTGLQIPPAAQQ 379
Query: 242 ----------------ASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATET 285
++A+N + N +NS + S P+AT CF L+NMF+P++E
Sbjct: 380 ALQMSGAIAIGAMAAVSAAMNPSLNVNMNSGALNLPSQ---PLATHCFQLSNMFNPSSEN 436
Query: 286 NPTWDVEIRDDVIEECNKHG 305
W+V+I+ DVIEECNKHG
Sbjct: 437 TFGWEVDIQRDVIEECNKHG 456
>gi|348503003|ref|XP_003439056.1| PREDICTED: RNA-binding protein 39-like [Oreochromis niloticus]
Length = 498
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/309 (63%), Positives = 241/309 (77%), Gaps = 12/309 (3%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAYIEF
Sbjct: 120 DNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEFV 179
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ SVPLA+GL GQ+LLG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 180 ESSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQ-KGSSGPMRLYVGSLHFNI 238
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE+MLRGIFEPFGKI+ IQLM+D +TGRSKGYGFI+F A+ AKKA EQLNGFELAGRPM
Sbjct: 239 TEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPM 298
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R++S S LD DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 299 KVGHVTERSDS-STASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQ 357
Query: 247 LAQN----------AILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDD 296
+ + A+ + Q + + P+AT C L+N+F+P E +P+W EI+DD
Sbjct: 358 MTGSIPFGGIGAPAAVPTPAPSQALNLPSQPLATHCLQLSNLFNPQAENDPSWAAEIQDD 417
Query: 297 VIEECNKHG 305
VIEECNKHG
Sbjct: 418 VIEECNKHG 426
>gi|291245050|ref|XP_002742404.1| PREDICTED: MGC81970 protein-like isoform 1 [Saccoglossus
kowalevskii]
Length = 556
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/338 (62%), Positives = 244/338 (72%), Gaps = 45/338 (13%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
DL PEERDART+FC QLSQ+IR RD+EEFFSSVG VRDVRLI+ +RR KGIAY+EF+D
Sbjct: 150 DLPPEERDARTVFCWQLSQKIRPRDMEEFFSSVGIVRDVRLISDRNSRRSKGIAYVEFQD 209
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
SVPLA+GL+GQKLL IPI+VQ +QAEKNRA NLQ +G GPMRLY+GSLHFNIT
Sbjct: 210 KNSVPLALGLSGQKLLSIPIMVQASQAEKNRAAQNSQNLQ-KGNSGPMRLYVGSLHFNIT 268
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E+MLRGIFEPFGKIDNIQLM D +TGRSKGYGFITFH A+DAKKA EQLNGFELAGRPMK
Sbjct: 269 EEMLRGIFEPFGKIDNIQLMKDNETGRSKGYGFITFHDAEDAKKALEQLNGFELAGRPMK 328
Query: 188 VGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL 247
VG VT+R+++ S LD+D++ER+G+DLG TGRLQLM KLAEGTG ++P AAA+ALN
Sbjct: 329 VGHVTERSDAATDA-SFLDSDDLERSGIDLGTTGRLQLMAKLAEGTGFQVPAAAAAALNP 387
Query: 248 AQN------AILNSST----------------------------------PQVSSSTAPP 267
+L +T P VS P
Sbjct: 388 LAGLPGIGLPVLPGTTPPQVMPPQPVNLQASLAAAQQQAQQQAAALHQPPPTVS---MPS 444
Query: 268 IATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
IAT CF+L+NMFDP ET+ WD EI+DDVIEECNKHG
Sbjct: 445 IATPCFMLSNMFDPTNETSSGWDREIQDDVIEECNKHG 482
>gi|291245052|ref|XP_002742405.1| PREDICTED: MGC81970 protein-like isoform 2 [Saccoglossus
kowalevskii]
Length = 444
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/338 (62%), Positives = 244/338 (72%), Gaps = 45/338 (13%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
DL PEERDART+FC QLSQ+IR RD+EEFFSSVG VRDVRLI+ +RR KGIAY+EF+D
Sbjct: 38 DLPPEERDARTVFCWQLSQKIRPRDMEEFFSSVGIVRDVRLISDRNSRRSKGIAYVEFQD 97
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
SVPLA+GL+GQKLL IPI+VQ +QAEKNRA NLQ +G GPMRLY+GSLHFNIT
Sbjct: 98 KNSVPLALGLSGQKLLSIPIMVQASQAEKNRAAQNSQNLQ-KGNSGPMRLYVGSLHFNIT 156
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E+MLRGIFEPFGKIDNIQLM D +TGRSKGYGFITFH A+DAKKA EQLNGFELAGRPMK
Sbjct: 157 EEMLRGIFEPFGKIDNIQLMKDNETGRSKGYGFITFHDAEDAKKALEQLNGFELAGRPMK 216
Query: 188 VGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL 247
VG VT+R+++ S LD+D++ER+G+DLG TGRLQLM KLAEGTG ++P AAA+ALN
Sbjct: 217 VGHVTERSDAATDA-SFLDSDDLERSGIDLGTTGRLQLMAKLAEGTGFQVPAAAAAALNP 275
Query: 248 AQN------AILNSST----------------------------------PQVSSSTAPP 267
+L +T P VS P
Sbjct: 276 LAGLPGIGLPVLPGTTPPQVMPPQPVNLQASLAAAQQQAQQQAAALHQPPPTVS---MPS 332
Query: 268 IATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
IAT CF+L+NMFDP ET+ WD EI+DDVIEECNKHG
Sbjct: 333 IATPCFMLSNMFDPTNETSSGWDREIQDDVIEECNKHG 370
>gi|391336770|ref|XP_003742751.1| PREDICTED: RNA-binding protein 39-like [Metaseiulus occidentalis]
Length = 520
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/309 (62%), Positives = 236/309 (76%), Gaps = 12/309 (3%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
+D+S EERD RT+FCMQLSQRIR RDLE+FFS+VGKVRDVR+I NKTR+ KGIAY+EF
Sbjct: 165 EDMSTEERDLRTVFCMQLSQRIRARDLEDFFSAVGKVRDVRMIVDNKTRKSKGIAYVEFF 224
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D ESVPLAMGLNGQKL G+PIIVQPTQAE+NR N T GPMRLY+GSLHF+I
Sbjct: 225 DLESVPLAMGLNGQKLFGVPIIVQPTQAERNRQANQTAA----STKGPMRLYVGSLHFDI 280
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
+E ML+ IFEPFG++D ++L + DTG+SKGYGF+TFH AD AKKA EQLNGFELAGRPM
Sbjct: 281 SEQMLKEIFEPFGRLDRVEL-IKEDTGKSKGYGFVTFHEADAAKKAMEQLNGFELAGRPM 339
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R G PS LD +E++R G++LGA GRL LM KLAEGTG++LP AA +AL
Sbjct: 340 KVGNVTERGMD-GSAPSILDNEELDRTGIELGAHGRLALMAKLAEGTGIQLPDAAKTALQ 398
Query: 247 LAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPA-TETNPTWDVEIRDDVIEECNKHG 305
Q+A S Q +++ IATQCFLL+NMFD A WD+E+R+DV++EC KH
Sbjct: 399 QMQSA---PSFGQTNNAQQESIATQCFLLSNMFDAAEAHQEKDWDLELREDVLQECRKH- 454
Query: 306 VGASTVCFI 314
G + CF+
Sbjct: 455 -GGAVHCFV 462
>gi|339237675|ref|XP_003380392.1| RNA-binding protein 39 [Trichinella spiralis]
gi|316976770|gb|EFV59992.1| RNA-binding protein 39 [Trichinella spiralis]
Length = 680
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/327 (59%), Positives = 240/327 (73%), Gaps = 38/327 (11%)
Query: 5 YSD-DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
Y D +LSPEERDART+FCMQL++ IR RDLEEFFS V KVRDVR+IT +KTRR KGIAY+
Sbjct: 216 YVDSELSPEERDARTVFCMQLARSIRPRDLEEFFSEVAKVRDVRIITDSKTRRSKGIAYV 275
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLH 123
EF D +SVPLA+ L+G++LLG PI+VQPTQ+EKNR + + GPM+LY+GSLH
Sbjct: 276 EFWDLDSVPLALSLHGKRLLGAPIVVQPTQSEKNRMASAMLATAFTQNRGPMKLYVGSLH 335
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
FNITE+MLRGIFEPFGKI++IQL+ DP+T RS+GYGFITF++++DAK+A EQLNGFELAG
Sbjct: 336 FNITEEMLRGIFEPFGKIESIQLLKDPETSRSRGYGFITFYNSEDAKRAMEQLNGFELAG 395
Query: 184 RPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAAS 243
RPMKVG VT+ ++ PS LD+DE++R+G+DLG TGRLQLM KLAEGTG+ELP A
Sbjct: 396 RPMKVGHVTEHQNTL-FQPS-LDSDELDRSGIDLGTTGRLQLMAKLAEGTGMELPQVAKQ 453
Query: 244 ALNLAQNAILNSSTPQVSSSTAPP--------------------------IATQCFLLAN 277
LN + PQ T PP IATQCF+L+N
Sbjct: 454 MLN---------AQPQQHQHTLPPAMQVQQQQQQQQQQHEQQQQLASQQLIATQCFVLSN 504
Query: 278 MFDPATETNPTWDVEIRDDVIEECNKH 304
MF+P E++P WD EIRDDVI+ECNKH
Sbjct: 505 MFNPMAESDPDWDREIRDDVIDECNKH 531
>gi|410055060|ref|XP_003953766.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391517|ref|XP_004062119.1| PREDICTED: RNA-binding protein 39 isoform 6 [Gorilla gorilla
gorilla]
gi|20988961|gb|AAH30493.1| Rbm39 protein [Mus musculus]
gi|34364789|emb|CAE45833.1| hypothetical protein [Homo sapiens]
gi|111598490|gb|AAH82607.1| Rbm39 protein [Mus musculus]
gi|119596570|gb|EAW76164.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_d [Homo
sapiens]
gi|149030835|gb|EDL85862.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_g [Rattus
norvegicus]
Length = 367
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/298 (64%), Positives = 231/298 (77%), Gaps = 17/298 (5%)
Query: 22 MQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQK 81
MQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF D SVPLA+GL GQ+
Sbjct: 1 MQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQR 60
Query: 82 LLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKI 141
+LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNITEDMLRGIFEPFG+I
Sbjct: 61 VLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRI 119
Query: 142 DNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGG 201
++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPMKVG VT+R ++
Sbjct: 120 ESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDA-SSA 178
Query: 202 PSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL----NLAQNAILNSST 257
S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL +LA A+ + T
Sbjct: 179 SSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQT 238
Query: 258 PQVSSST----------APPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
++S T P+ATQCF L+NMF+P TE WD EI+DDVIEECNKHG
Sbjct: 239 -RLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHG 295
>gi|221041852|dbj|BAH12603.1| unnamed protein product [Homo sapiens]
Length = 337
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/303 (63%), Positives = 230/303 (75%), Gaps = 21/303 (6%)
Query: 22 MQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQK 81
MQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF D SVPLA+GL GQ+
Sbjct: 1 MQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQR 60
Query: 82 LLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKI 141
+LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNITEDMLRGIFEPFG+I
Sbjct: 61 VLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRI 119
Query: 142 DNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGG 201
++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPMKVG VT+R ++
Sbjct: 120 ESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDA-SSA 178
Query: 202 PSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL----NLAQNAILNSS- 256
S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL +LA A+ S
Sbjct: 179 SSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSF 238
Query: 257 ----TPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECN 302
++S T P+ATQCF L+NMF+P TE WD EI+DDVIEECN
Sbjct: 239 VIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECN 298
Query: 303 KHG 305
KHG
Sbjct: 299 KHG 301
>gi|426241414|ref|XP_004014586.1| PREDICTED: RNA-binding protein 39 isoform 7 [Ovis aries]
Length = 367
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/298 (64%), Positives = 230/298 (77%), Gaps = 17/298 (5%)
Query: 22 MQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQK 81
MQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF D SVPLA+GL GQ+
Sbjct: 1 MQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQR 60
Query: 82 LLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKI 141
+LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNITEDMLRGIFEPFG+I
Sbjct: 61 VLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRI 119
Query: 142 DNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGG 201
++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFEL GRPMKVG VT+R ++
Sbjct: 120 ESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKVGHVTERTDA-SSA 178
Query: 202 PSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL----NLAQNAILNSST 257
S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL +LA A+ + T
Sbjct: 179 SSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQT 238
Query: 258 PQVSSST----------APPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
++S T P+ATQCF L+NMF+P TE WD EI+DDVIEECNKHG
Sbjct: 239 -RLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHG 295
>gi|410055058|ref|XP_003316934.2| PREDICTED: uncharacterized protein LOC458443 isoform 4 [Pan
troglodytes]
gi|410055062|ref|XP_003953767.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391515|ref|XP_004062118.1| PREDICTED: RNA-binding protein 39 isoform 5 [Gorilla gorilla
gorilla]
gi|426391519|ref|XP_004062120.1| PREDICTED: RNA-binding protein 39 isoform 7 [Gorilla gorilla
gorilla]
gi|119596566|gb|EAW76160.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
gi|119596571|gb|EAW76165.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
Length = 373
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/303 (62%), Positives = 229/303 (75%), Gaps = 21/303 (6%)
Query: 22 MQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQK 81
MQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF D SVPLA+GL GQ+
Sbjct: 1 MQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQR 60
Query: 82 LLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKI 141
+LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNITEDMLRGIFEPFG+I
Sbjct: 61 VLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRI 119
Query: 142 DNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGG 201
++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPMKVG VT+R ++
Sbjct: 120 ESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDA-SSA 178
Query: 202 PSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL---------AQNAI 252
S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL + A+ +
Sbjct: 179 SSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSF 238
Query: 253 LNSSTPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECN 302
+ ++S T P+ATQCF L+NMF+P TE WD EI+DDVIEECN
Sbjct: 239 VIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECN 298
Query: 303 KHG 305
KHG
Sbjct: 299 KHG 301
>gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/303 (63%), Positives = 230/303 (75%), Gaps = 21/303 (6%)
Query: 22 MQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQK 81
MQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF D SVPLA+GL GQ+
Sbjct: 1 MQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQR 60
Query: 82 LLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKI 141
+LG+PI+VQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNITEDMLRGIFEPFG+I
Sbjct: 61 VLGVPIVVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRI 119
Query: 142 DNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGG 201
++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPMKVG VT+R ++
Sbjct: 120 ESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDA-SSA 178
Query: 202 PSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL----NLAQNAILNSS- 256
S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL +LA A+ S
Sbjct: 179 SSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSF 238
Query: 257 ----TPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECN 302
++S T P+ATQCF L+NMF+P TE WD EI+DDVIEECN
Sbjct: 239 VIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECN 298
Query: 303 KHG 305
KHG
Sbjct: 299 KHG 301
>gi|198422099|ref|XP_002129220.1| PREDICTED: similar to RNA binding motif protein 39 [Ciona
intestinalis]
Length = 465
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/298 (61%), Positives = 230/298 (77%), Gaps = 7/298 (2%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
+RDARTIFCMQL+QRIR RDLEEFFSSVGKVR+V+LI ++R KGIAY+EFKD ES+P
Sbjct: 100 DRDARTIFCMQLAQRIRVRDLEEFFSSVGKVREVKLIQDKHSKRSKGIAYVEFKDLESIP 159
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
LA+GL+GQKLLG+PI+VQPTQ+EKN+ +LQ + GP +LY+GSLH NITE+M++
Sbjct: 160 LALGLSGQKLLGVPIVVQPTQSEKNKIAAAQLSLQ-KAALGPTKLYVGSLHENITEEMIK 218
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTV- 191
GIF PFG+++ +Q++ D D G S+GYGFITF A+ AK+A +QLNGFE+AG+P+K+ TV
Sbjct: 219 GIFSPFGRVEQVQIIKD-DAGASRGYGFITFAEAECAKRALDQLNGFEIAGKPIKLNTVS 277
Query: 192 --TDRN--ESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL 247
TD N + + GPS LD D +ERAG+DLG TGRLQLM KLAEGTGLE+P AA AL L
Sbjct: 278 YGTDMNAMQGLASGPSFLDNDAVERAGIDLGTTGRLQLMAKLAEGTGLEVPSAAQQALYL 337
Query: 248 AQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
Q+ L ++ APPIAT CF L+NMFDP ET +WD EIRDDVIEEC +HG
Sbjct: 338 GQSMGLGLPQSAAGTTGAPPIATTCFQLSNMFDPLNETGSSWDKEIRDDVIEECQRHG 395
>gi|426241412|ref|XP_004014585.1| PREDICTED: RNA-binding protein 39 isoform 6 [Ovis aries]
gi|426241416|ref|XP_004014587.1| PREDICTED: RNA-binding protein 39 isoform 8 [Ovis aries]
Length = 373
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/303 (63%), Positives = 229/303 (75%), Gaps = 21/303 (6%)
Query: 22 MQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQK 81
MQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF D SVPLA+GL GQ+
Sbjct: 1 MQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQR 60
Query: 82 LLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKI 141
+LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNITEDMLRGIFEPFG+I
Sbjct: 61 VLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRI 119
Query: 142 DNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGG 201
++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFEL GRPMKVG VT+R ++
Sbjct: 120 ESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKVGHVTERTDA-SSA 178
Query: 202 PSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL----NLAQNAILNSS- 256
S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL +LA A+ S
Sbjct: 179 SSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSF 238
Query: 257 ----TPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECN 302
++S T P+ATQCF L+NMF+P TE WD EI+DDVIEECN
Sbjct: 239 VIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECN 298
Query: 303 KHG 305
KHG
Sbjct: 299 KHG 301
>gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/303 (62%), Positives = 228/303 (75%), Gaps = 21/303 (6%)
Query: 22 MQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQK 81
MQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF D SVPLA+GL GQ+
Sbjct: 1 MQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQR 60
Query: 82 LLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKI 141
+LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNITEDMLRGIFEPFG+I
Sbjct: 61 VLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRI 119
Query: 142 DNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGG 201
++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPMKVG VT+R ++
Sbjct: 120 ESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDA-SSA 178
Query: 202 PSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL---------AQNAI 252
S LD+D +ER G+DLG TGRLQLM +LAEGTGL++PPAA AL + A+ +
Sbjct: 179 SSFLDSDGLERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSF 238
Query: 253 LNSSTPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECN 302
+ ++S T P+ATQCF L+NMF+P TE WD EI+DDVIEECN
Sbjct: 239 VIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECN 298
Query: 303 KHG 305
KHG
Sbjct: 299 KHG 301
>gi|403281374|ref|XP_003932163.1| PREDICTED: RNA-binding protein 39 [Saimiri boliviensis boliviensis]
Length = 502
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/294 (64%), Positives = 231/294 (78%), Gaps = 17/294 (5%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 203 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 261
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 262 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 321
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 322 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 380
Query: 246 ---NLAQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETN 286
+LA A+ + T ++S T P+ATQCF L+NMF+P T+ N
Sbjct: 381 MSGSLAFGAVADLQT-RLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTQWN 433
>gi|395863338|ref|XP_003803853.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Otolemur
garnettii]
gi|395863342|ref|XP_003803855.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Otolemur
garnettii]
Length = 487
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/318 (60%), Positives = 233/318 (73%), Gaps = 22/318 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLE FFS+VGKVRDVR+I+ RR KGIAY+EF
Sbjct: 101 DNLTPEERDARTVFCMQLAARIRPRDLEAFFSTVGKVRDVRMISDRNARRSKGIAYVEFV 160
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++ G+PI+V+ +QAEKNRA NLQ +G GPMRLY+GSLH NI
Sbjct: 161 DVSSVPLAIGLTGQRVFGVPILVRASQAEKNRAAAMANNLQ-KGRAGPMRLYVGSLHLNI 219
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE MLRGIFEPFG++++IQLM D +TGRSKGYGFITF ++ AKKA EQLNG ELAGRPM
Sbjct: 220 TEAMLRGIFEPFGRLESIQLMKDSETGRSKGYGFITFSDSECAKKALEQLNGLELAGRPM 279
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+ ++ S L++DE+ER G+DLG G LQ M +LAEGTGL++PPAA AL
Sbjct: 280 KVGHVTEGTDA-STASSFLNSDELERTGIDLGTAGGLQFMARLAEGTGLQIPPAAQQALQ 338
Query: 247 ----LAQNA---------ILNSSTPQVSSS------TAPPIATQCFLLANMFDPATETNP 287
LA A +L + Q +S + P+ATQCF L+NMF+P TE
Sbjct: 339 MNSPLAFGATAEFSFRLDLLTRLSQQTQASDLAAAASVQPLATQCFQLSNMFNPQTE-EV 397
Query: 288 TWDVEIRDDVIEECNKHG 305
WD EI+DDVIEECNKHG
Sbjct: 398 GWDTEIKDDVIEECNKHG 415
>gi|395863336|ref|XP_003803852.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Otolemur
garnettii]
gi|395863340|ref|XP_003803854.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Otolemur
garnettii]
Length = 514
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/318 (60%), Positives = 233/318 (73%), Gaps = 22/318 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLE FFS+VGKVRDVR+I+ RR KGIAY+EF
Sbjct: 128 DNLTPEERDARTVFCMQLAARIRPRDLEAFFSTVGKVRDVRMISDRNARRSKGIAYVEFV 187
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++ G+PI+V+ +QAEKNRA NLQ +G GPMRLY+GSLH NI
Sbjct: 188 DVSSVPLAIGLTGQRVFGVPILVRASQAEKNRAAAMANNLQ-KGRAGPMRLYVGSLHLNI 246
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE MLRGIFEPFG++++IQLM D +TGRSKGYGFITF ++ AKKA EQLNG ELAGRPM
Sbjct: 247 TEAMLRGIFEPFGRLESIQLMKDSETGRSKGYGFITFSDSECAKKALEQLNGLELAGRPM 306
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+ ++ S L++DE+ER G+DLG G LQ M +LAEGTGL++PPAA AL
Sbjct: 307 KVGHVTEGTDA-STASSFLNSDELERTGIDLGTAGGLQFMARLAEGTGLQIPPAAQQALQ 365
Query: 247 ----LAQNA---------ILNSSTPQVSSS------TAPPIATQCFLLANMFDPATETNP 287
LA A +L + Q +S + P+ATQCF L+NMF+P TE
Sbjct: 366 MNSPLAFGATAEFSFRLDLLTRLSQQTQASDLAAAASVQPLATQCFQLSNMFNPQTE-EV 424
Query: 288 TWDVEIRDDVIEECNKHG 305
WD EI+DDVIEECNKHG
Sbjct: 425 GWDTEIKDDVIEECNKHG 442
>gi|119596572|gb|EAW76166.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_e [Homo
sapiens]
Length = 445
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 189/302 (62%), Positives = 231/302 (76%), Gaps = 23/302 (7%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 203 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 261
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 262 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 321
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 322 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 380
Query: 246 ---NLAQNAILNSS-----TPQVSSST----------APPIATQCFLLANMFDPATETNP 287
+LA A+ S ++S T P+ATQCF L+NMF+P +T
Sbjct: 381 MSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNP--QTRR 438
Query: 288 TW 289
+W
Sbjct: 439 SW 440
>gi|226469236|emb|CAX70097.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 463
Score = 367 bits (943), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 190/309 (61%), Positives = 239/309 (77%), Gaps = 10/309 (3%)
Query: 2 RPAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIA 61
R S +LSPEERDART+F QLS RIR RDLE+FF+SVGK+RDVRLI NKT+R KGIA
Sbjct: 89 RRQKSPELSPEERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMDNKTKRSKGIA 148
Query: 62 YIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGT---GGPMRLY 118
Y+EF++ ES LA+GL G +LLG+PI +Q + AEKNR T P+L PR + GPM+LY
Sbjct: 149 YVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSAT-PSL-PRPSQQNKGPMKLY 206
Query: 119 IGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
IGSLH+NITE+ML+GIFEPFGKI++I+L+ DP T RS+GYGF+T+ ++DDAKKA +QLNG
Sbjct: 207 IGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFVTYVNSDDAKKALDQLNG 266
Query: 179 FELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELP 238
FELAGRPMKV VT+R+E S LD DE +R+GVDLG TGRL LM KLAEGTGLE+P
Sbjct: 267 FELAGRPMKVNHVTERSEY--ACLSALDNDEADRSGVDLGTTGRLALMAKLAEGTGLEIP 324
Query: 239 PAAASALNLAQN--AILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDD 296
AA + L++ QN + ++ + SS+ APP+ TQCF+L+NMFDP T+ ++ EIRDD
Sbjct: 325 KAALAQLHIGQNNPILGSAGSVSSSSAIAPPVCTQCFMLSNMFDPHVATHSVFE-EIRDD 383
Query: 297 VIEECNKHG 305
VIEEC K G
Sbjct: 384 VIEECTKAG 392
>gi|256082940|ref|XP_002577709.1| splicing factor [Schistosoma mansoni]
gi|360043602|emb|CCD81148.1| putative splicing factor [Schistosoma mansoni]
Length = 463
Score = 367 bits (941), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 190/309 (61%), Positives = 239/309 (77%), Gaps = 10/309 (3%)
Query: 2 RPAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIA 61
R S +LSPEERDART+F QLS RIR RDLE+FF+SVGK+RDVRLI NKT+R KGIA
Sbjct: 89 RRQKSPELSPEERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMDNKTKRSKGIA 148
Query: 62 YIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTG---GPMRLY 118
Y+EF++ ES LA+GL G +LLG+PI +Q + AEKNR T P+L PR + GPM+LY
Sbjct: 149 YVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSAT-PSL-PRPSQQNRGPMKLY 206
Query: 119 IGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
IGSLH+NITE+ML+GIFEPFGKI++I+L+ DP T RS+GYGF+T+ ++DDAKKA +QLNG
Sbjct: 207 IGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPTTNRSQGYGFVTYVNSDDAKKALDQLNG 266
Query: 179 FELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELP 238
FELAGRPMKV VT+R+E S LD DE +R+GVDLG TGRL LM KLAEGTGLE+P
Sbjct: 267 FELAGRPMKVNHVTERSEY--ACLSALDNDEADRSGVDLGTTGRLALMAKLAEGTGLEIP 324
Query: 239 PAAASALNLAQN--AILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDD 296
AA + L++ QN + ++ + SS+ APP+ TQCF+L+NMFDP T+ ++ EIRDD
Sbjct: 325 KAALAQLHIGQNNPILGSAGSVSSSSAIAPPVCTQCFMLSNMFDPHVATHSVFE-EIRDD 383
Query: 297 VIEECNKHG 305
VIEEC K G
Sbjct: 384 VIEECTKAG 392
>gi|301624539|ref|XP_002941556.1| PREDICTED: RNA-binding protein 39 [Xenopus (Silurana) tropicalis]
Length = 420
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 184/277 (66%), Positives = 221/277 (79%), Gaps = 7/277 (2%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
LSPEERDART+FCMQL+ RIR+RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF D
Sbjct: 142 LSPEERDARTVFCMQLAARIRSRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCDI 201
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
+SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ RG GPMRLY+GSLHFNITE
Sbjct: 202 QSVPLAIGLTGQRLLGVPIIVQVSQAEKNRLAAMSNNLQ-RGNPGPMRLYVGSLHFNITE 260
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
DMLRGIFEPFGKI+NIQL+ +PDTGRSKG+GFITF A+ A++A EQLNGFELAGRPMKV
Sbjct: 261 DMLRGIFEPFGKIENIQLLKEPDTGRSKGFGFITFTDAECARRALEQLNGFELAGRPMKV 320
Query: 189 GTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLA 248
G VTD E GG S LD+DE+ER G+DLGATGRLQLM KLAEGTGL++P AA +AL L
Sbjct: 321 GHVTDHLEG-GGEASFLDSDELERTGIDLGATGRLQLMAKLAEGTGLQIPLAAQAALQLG 379
Query: 249 QNAILNSSTPQVSS-----STAPPIATQCFLLANMFD 280
L + P +++ + A I+ Q F L+N+F+
Sbjct: 380 GAIPLTALNPTLTALSPALNLAQSISAQSFQLSNLFN 416
>gi|190402270|gb|ACE77680.1| RNA binding motif protein 39 isoform a (predicted) [Sorex araneus]
Length = 435
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 170/242 (70%), Positives = 205/242 (84%), Gaps = 2/242 (0%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 203 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 261
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 262 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 321
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 322 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 380
Query: 247 LA 248
++
Sbjct: 381 MS 382
>gi|119596573|gb|EAW76167.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Homo
sapiens]
Length = 423
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/242 (70%), Positives = 205/242 (84%), Gaps = 2/242 (0%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 203 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 261
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 262 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 321
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 322 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 380
Query: 247 LA 248
++
Sbjct: 381 MS 382
>gi|355715684|gb|AES05403.1| RNA binding motif protein 39 [Mustela putorius furo]
Length = 271
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/242 (70%), Positives = 205/242 (84%), Gaps = 2/242 (0%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 23 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 82
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 83 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 141
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 142 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 201
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 202 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 260
Query: 247 LA 248
++
Sbjct: 261 MS 262
>gi|349604477|gb|AEQ00017.1| RNA-binding protein 39-like protein, partial [Equus caballus]
Length = 374
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/242 (70%), Positives = 205/242 (84%), Gaps = 2/242 (0%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 126 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 185
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 186 DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNI 244
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 245 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 304
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 305 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 363
Query: 247 LA 248
++
Sbjct: 364 MS 365
>gi|47212427|emb|CAF93583.1| unnamed protein product [Tetraodon nigroviridis]
Length = 500
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 182/293 (62%), Positives = 222/293 (75%), Gaps = 19/293 (6%)
Query: 28 IRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPI 87
+R RDLE+FFS+VGKVRDVR+I+ +RR KGIAYIEF + SVPLA+GL GQ+LLG+PI
Sbjct: 139 LRPRDLEDFFSAVGKVRDVRMISDRSSRRSKGIAYIEFVEASSVPLAIGLTGQRLLGVPI 198
Query: 88 IVQPTQAEKNRAGNTLP------NLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKI 141
IVQ +QAEKNRA NLQ +G GP+RLY+GSLHFNITE+MLRGIFEPFG+I
Sbjct: 199 IVQASQAEKNRAAAAAAAAAAANNLQ-KGMMGPLRLYVGSLHFNITEEMLRGIFEPFGRI 257
Query: 142 DNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGG 201
+NIQLMVD DTGRSKGYGFITF A+ AKKA EQLNGFELAGRPMKVG VTDR+++V
Sbjct: 258 ENIQLMVDSDTGRSKGYGFITFADAECAKKALEQLNGFELAGRPMKVGHVTDRSDAV--A 315
Query: 202 PSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVS 261
P D +E ERAG DLG+TGRLQLM +L+EGTGL +PP+A AL ++ AI + VS
Sbjct: 316 PPFPDGEEQERAGADLGSTGRLQLMAQLSEGTGLPMPPSAQQALQMS-GAIALGAMAAVS 374
Query: 262 SSTAP---------PIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
++ P P+AT CF L+NMF P +E P W+++I+ +VIEECNKHG
Sbjct: 375 AAMNPGLNMSIPSQPLATHCFQLSNMFSPNSELPPGWELDIQHNVIEECNKHG 427
>gi|170284570|gb|AAI61141.1| rbm23 protein [Xenopus (Silurana) tropicalis]
Length = 272
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 177/270 (65%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 16 ARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM 75
ART+FCMQL+ RIR+RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF D +SVPLA+
Sbjct: 1 ARTVFCMQLAARIRSRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCDIQSVPLAI 60
Query: 76 GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIF 135
GL GQ+LLG+PIIVQ +QAEKNR NLQ RG GPMRLY+GSLHFNITEDMLRGIF
Sbjct: 61 GLTGQRLLGVPIIVQVSQAEKNRLAAMSNNLQ-RGNPGPMRLYVGSLHFNITEDMLRGIF 119
Query: 136 EPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRN 195
EPFGKI+NIQL+ +PDTGRSKG+GFITF A+ A++A EQLNGFELAGRPMKVG VTD
Sbjct: 120 EPFGKIENIQLLKEPDTGRSKGFGFITFTDAECARRALEQLNGFELAGRPMKVGHVTDHL 179
Query: 196 ESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNS 255
E GG S LD+DE+ER G+DLGATGRLQLM KLAEGTGL++P AA +AL L L +
Sbjct: 180 EG-GGEASFLDSDELERTGIDLGATGRLQLMAKLAEGTGLQIPLAAQAALQLGGAIPLTA 238
Query: 256 STPQVSS-----STAPPIATQCFLLANMFD 280
P +++ + A I+ Q F L+N+F+
Sbjct: 239 LNPTLTALSPALNLAQSISAQSFQLSNLFN 268
>gi|324507842|gb|ADY43315.1| RNA-binding protein 39 [Ascaris suum]
Length = 618
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/302 (59%), Positives = 219/302 (72%), Gaps = 8/302 (2%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
D++ EERD RT+F +Q++++ R RDLEEFFSSVG VRDVR+IT +KTRR KGI Y+EF +
Sbjct: 241 DMTSEERDQRTVFILQIARQTRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWE 300
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLP----NLQPRGTGGPMRLYIGSLH 123
ESV LA+ LNGQKLLG P+++QPT AE+NRA N P T GP++LYIG LH
Sbjct: 301 IESVNLALALNGQKLLGAPLVIQPTLAERNRAANNTVGGSLGFGPTNTTGPLKLYIGQLH 360
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+ITEDMLR IFEPFGKID +++ D +G SKGY ++TF ADDAK+A EQ+NGFELAG
Sbjct: 361 TSITEDMLRRIFEPFGKIDTLEIATDL-SGVSKGYAYVTFRHADDAKRAMEQMNGFELAG 419
Query: 184 RPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAAS 243
RPMKVGTV D +E LDTDE +R G+DLG +GRL LM KLAEG+GLELP +A
Sbjct: 420 RPMKVGTV-DGDEVPSQPQRTLDTDEADRRGIDLGTSGRLHLMAKLAEGSGLELPKSAKD 478
Query: 244 ALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNK 303
LAQN T + PPIATQCFLL+NMFDPA ET W E+RDDVIEEC K
Sbjct: 479 M--LAQNQQQQQQTDSSQNLAIPPIATQCFLLSNMFDPAQETGENWADEVRDDVIEECAK 536
Query: 304 HG 305
+G
Sbjct: 537 NG 538
>gi|324508128|gb|ADY43435.1| RNA-binding protein 39 [Ascaris suum]
Length = 535
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 181/302 (59%), Positives = 219/302 (72%), Gaps = 8/302 (2%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
D++ EERD RT+F +Q++++ R RDLEEFFSSVG VRDVR+IT +KTRR KGI Y+EF +
Sbjct: 158 DMTSEERDQRTVFILQIARQTRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWE 217
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLP----NLQPRGTGGPMRLYIGSLH 123
ESV LA+ LNGQKLLG P+++QPT AE+NRA N P T GP++LYIG LH
Sbjct: 218 IESVNLALALNGQKLLGAPLVIQPTLAERNRAANNTVGGSLGFGPTNTTGPLKLYIGQLH 277
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+ITEDMLR IFEPFGKID +++ D +G SKGY ++TF ADDAK+A EQ+NGFELAG
Sbjct: 278 TSITEDMLRRIFEPFGKIDTLEIATDL-SGVSKGYAYVTFRHADDAKRAMEQMNGFELAG 336
Query: 184 RPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAAS 243
RPMKVGTV D +E LDTDE +R G+DLG +GRL LM KLAEG+GLELP +A
Sbjct: 337 RPMKVGTV-DGDEVPSQPQRTLDTDEADRRGIDLGTSGRLHLMAKLAEGSGLELPKSAKD 395
Query: 244 ALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNK 303
LAQN T + PPIATQCFLL+NMFDPA ET W E+RDDVIEEC K
Sbjct: 396 M--LAQNQQQQQQTDSSQNLAIPPIATQCFLLSNMFDPAQETGENWADEVRDDVIEECAK 453
Query: 304 HG 305
+G
Sbjct: 454 NG 455
>gi|148231281|ref|NP_001085808.1| RNA binding motif protein 23 [Xenopus laevis]
gi|49118375|gb|AAH73374.1| MGC80803 protein [Xenopus laevis]
Length = 416
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 178/279 (63%), Positives = 217/279 (77%), Gaps = 18/279 (6%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
LSPEERDART+FCMQL+ RIR+RDLE+FFS+VGKVRDV++I+ +RR KGIAY+EF +
Sbjct: 145 LSPEERDARTVFCMQLAARIRSRDLEDFFSAVGKVRDVKIISDRNSRRSKGIAYVEFCEI 204
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ RG GPMRLY+GSLHFNITE
Sbjct: 205 HSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMSNNLQ-RGNFGPMRLYVGSLHFNITE 263
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+MLRGIFEPFGKI+NIQL+ +PDTGRSKG+GFITF A+ A++A EQLNGFELAG+PMKV
Sbjct: 264 EMLRGIFEPFGKIENIQLLKEPDTGRSKGFGFITFTDAECARRALEQLNGFELAGKPMKV 323
Query: 189 GTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL- 247
G VT GG S LD+DE+ER G+ LGATGRLQLM KLA+GTGL++P AA +AL L
Sbjct: 324 GHVTG-----GGDASFLDSDELERNGIGLGATGRLQLMAKLAQGTGLQIPLAAQAALQLN 378
Query: 248 ------AQNAILNSSTPQVSSSTAPPIATQCFLLANMFD 280
A N L + TP ++ +T Q F L+N+F+
Sbjct: 379 GAFPLTALNPALTALTPALNLAT-----QQGFQLSNIFN 412
>gi|170575391|ref|XP_001893221.1| splicing factor, CC1-like family protein [Brugia malayi]
gi|158600898|gb|EDP37951.1| splicing factor, CC1-like family protein [Brugia malayi]
Length = 640
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/303 (57%), Positives = 218/303 (71%), Gaps = 10/303 (3%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
D++ EERD RT+F +Q+++ R RDLEEFFSSVG VRDVR+IT +KTRR KGI Y+EF +
Sbjct: 258 DMTSEERDQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWE 317
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGN-----TLPNLQPRGTGGPMRLYIGSL 122
ESV LA+ LNGQKLLG P+++QPT AE+NRA N TL P T GP++LY+G L
Sbjct: 318 IESVNLALALNGQKLLGAPLVIQPTLAERNRAANNTVGGTL-GFGPTNTTGPLKLYVGQL 376
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
H +ITEDML IF+PFGKI+N+++ D +G SKGY ++TF ADD K+A EQ+NGFELA
Sbjct: 377 HTSITEDMLGRIFDPFGKIENLEIATDL-SGVSKGYAYVTFRHADDGKRAMEQMNGFELA 435
Query: 183 GRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAA 242
GRPMKV +V LDTD+ +R G+DLG +GRL LM KLAEG+GLELP +A
Sbjct: 436 GRPMKVCSVEGDEMPPPVPQRTLDTDDADRRGIDLGTSGRLHLMAKLAEGSGLELPKSAK 495
Query: 243 SALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECN 302
L Q L S+T V+ PPIATQCF+L+NMFDP+ ET TW E+RDDVIEEC
Sbjct: 496 EILAQNQQQ-LESAT--VTGPAIPPIATQCFMLSNMFDPSQETGETWADEVRDDVIEECA 552
Query: 303 KHG 305
K+G
Sbjct: 553 KNG 555
>gi|402588492|gb|EJW82425.1| splicing factor, partial [Wuchereria bancrofti]
Length = 471
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/303 (57%), Positives = 218/303 (71%), Gaps = 10/303 (3%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
D++ EERD RT+F +Q+++ R RDLEEFFSSVG VRDVR+IT +KTRR KGI Y+EF +
Sbjct: 89 DMTSEERDQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWE 148
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGN-----TLPNLQPRGTGGPMRLYIGSL 122
ESV LA+ LNGQKLLG P+++QPT AE+NRA N TL P T GP++LY+G L
Sbjct: 149 IESVNLALALNGQKLLGAPLVIQPTLAERNRAANNTVGGTL-GFGPTNTTGPLKLYVGQL 207
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
H +ITEDML IF+PFGKI+N+++ D +G SKGY ++TF ADD K+A EQ+NGFELA
Sbjct: 208 HTSITEDMLGRIFDPFGKIENLEIATD-LSGVSKGYAYVTFRHADDGKRAMEQMNGFELA 266
Query: 183 GRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAA 242
GRPMKV +V LDTD+ +R G+DLG +GRL LM KLAEG+GLELP +A
Sbjct: 267 GRPMKVCSVEGDELPPPVPQRTLDTDDADRRGIDLGTSGRLHLMAKLAEGSGLELPKSAK 326
Query: 243 SALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECN 302
L Q L S+T V+ PPIATQCF+L+NMFDP+ ET TW E+RDDVIEEC
Sbjct: 327 EILAQNQQQ-LESAT--VTGPAIPPIATQCFMLSNMFDPSQETGETWADEVRDDVIEECA 383
Query: 303 KHG 305
K+G
Sbjct: 384 KNG 386
>gi|393910287|gb|EFO25730.2| hypothetical protein LOAG_02757 [Loa loa]
Length = 526
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 174/308 (56%), Positives = 219/308 (71%), Gaps = 20/308 (6%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
D++ EERD RT+F +Q+++ R RDLEEFFSSVG VRDVR+IT +KTRR KGI Y+EF +
Sbjct: 144 DMTSEERDQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWE 203
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGN-----TLPNLQPRGTGGPMRLYIGSL 122
ESV LA+ LNGQKLLG P+++QPT AE+NRA N TL P T GP++LY+G L
Sbjct: 204 IESVNLALALNGQKLLGAPLVIQPTLAERNRAANNTVGGTL-GFGPTNTTGPLKLYVGQL 262
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
H +ITEDML IF+PFGKI+N+++ D +G SKGY ++TF ADD K+A EQ+NGFELA
Sbjct: 263 HTSITEDMLGRIFDPFGKIENLEIATD-LSGVSKGYAYVTFRHADDGKRAMEQMNGFELA 321
Query: 183 GRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAA 242
GRPMKV +V LDTD+ +R G+DLG +GRL LM KLAEG+GLELP +A
Sbjct: 322 GRPMKVCSVEGDELPPPVPQRTLDTDDADRRGIDLGTSGRLHLMAKLAEGSGLELPKSA- 380
Query: 243 SALNLAQNAILNSSTPQVSSSTA-----PPIATQCFLLANMFDPATETNPTWDVEIRDDV 297
IL + Q+ S+TA PPIATQCF+L+NMFDP+ ET TW E+RDDV
Sbjct: 381 -------KEILAQNQQQLESATATGPAIPPIATQCFMLSNMFDPSQETGETWADEVRDDV 433
Query: 298 IEECNKHG 305
IEEC K+G
Sbjct: 434 IEECAKNG 441
>gi|312070862|ref|XP_003138342.1| hypothetical protein LOAG_02757 [Loa loa]
Length = 648
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 175/313 (55%), Positives = 220/313 (70%), Gaps = 20/313 (6%)
Query: 3 PAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY 62
P D++ EERD RT+F +Q+++ R RDLEEFFSSVG VRDVR+IT +KTRR KGI Y
Sbjct: 261 PNAKMDMTSEERDQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICY 320
Query: 63 IEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGN-----TLPNLQPRGTGGPMRL 117
+EF + ESV LA+ LNGQKLLG P+++QPT AE+NRA N TL P T GP++L
Sbjct: 321 VEFWEIESVNLALALNGQKLLGAPLVIQPTLAERNRAANNTVGGTL-GFGPTNTTGPLKL 379
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
Y+G LH +ITEDML IF+PFGKI+N+++ D +G SKGY ++TF ADD K+A EQ+N
Sbjct: 380 YVGQLHTSITEDMLGRIFDPFGKIENLEIATDL-SGVSKGYAYVTFRHADDGKRAMEQMN 438
Query: 178 GFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLEL 237
GFELAGRPMKV +V LDTD+ +R G+DLG +GRL LM KLAEG+GLEL
Sbjct: 439 GFELAGRPMKVCSVEGDELPPPVPQRTLDTDDADRRGIDLGTSGRLHLMAKLAEGSGLEL 498
Query: 238 PPAAASALNLAQNAILNSSTPQVSSSTA-----PPIATQCFLLANMFDPATETNPTWDVE 292
P +A IL + Q+ S+TA PPIATQCF+L+NMFDP+ ET TW E
Sbjct: 499 PKSAKE--------ILAQNQQQLESATATGPAIPPIATQCFMLSNMFDPSQETGETWADE 550
Query: 293 IRDDVIEECNKHG 305
+RDDVIEEC K+G
Sbjct: 551 VRDDVIEECAKNG 563
>gi|431907193|gb|ELK11259.1| Putative RNA-binding protein 23 [Pteropus alecto]
Length = 914
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 178/289 (61%), Positives = 216/289 (74%), Gaps = 15/289 (5%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 136 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 195
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 196 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 254
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 255 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSESECARRALEQLNGFELAGRPM 314
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELP-PAAASA 244
+VG VT+R + GG + E +D G A GRLQLM KLAEG+G++LP AAA+A
Sbjct: 315 RVGHVTERLD--GGTDITFPDGDQE---LDPGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 369
Query: 245 LNLAQNAILNSSTPQVSSSTAP-------PIATQCFLLANMFDPATETN 286
L L L + P ++ +P IA+ CF L+N+F P T N
Sbjct: 370 LQLNGAVPLGALNPATLTALSPALNLASQAIASHCFQLSNLFSPQTIVN 418
>gi|335310533|ref|XP_003362077.1| PREDICTED: probable RNA-binding protein 23 [Sus scrofa]
Length = 443
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 173/291 (59%), Positives = 216/291 (74%), Gaps = 20/291 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 158 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 217
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +GTGGPMRLY+GSLHFNI
Sbjct: 218 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGTGGPMRLYVGSLHFNI 276
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 277 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 336
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
++G VT+R + G +++ + ++ +DLG A GRLQLM KLAEG+G++LP
Sbjct: 337 RIGHVTERLD----GSTDITFPDGDQE-LDLGSAGGRLQLMAKLAEGSGIQLPTTXXXXX 391
Query: 241 -AASALNLAQNAILNSSTPQVSSSTAP-------PIATQCFLLANMFDPAT 283
AL L L + P ++ +P IA+QCF L+++F P T
Sbjct: 392 XXXXALQLNGAVPLGALNPAALTALSPALNLASQAIASQCFQLSSLFTPQT 442
>gi|395503034|ref|XP_003755878.1| PREDICTED: probable RNA-binding protein 23 [Sarcophilus harrisii]
Length = 451
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/290 (60%), Positives = 215/290 (74%), Gaps = 20/290 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 168 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 227
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 228 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 286
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM DPDTGRSKG+GF+TF ++ A++A EQLNGFELAGRPM
Sbjct: 287 TEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECARRALEQLNGFELAGRPM 346
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + GG D E +DLG A GRLQLM KLAEG+G++LP
Sbjct: 347 RVGHVTER---LDGGTDITFPDGGEE--LDLGTAGGRLQLMAKLAEGSGIQLPTTAAAAQ 401
Query: 241 -------AASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
A L A L + +P ++ ++ IA+QCF L+++F P T
Sbjct: 402 AAALQLNGAVPLGALNPAALTALSPALNLASQ-AIASQCFQLSSLFTPQT 450
>gi|126277396|ref|XP_001369125.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Monodelphis
domestica]
Length = 449
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/290 (60%), Positives = 215/290 (74%), Gaps = 20/290 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 166 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 225
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 226 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 284
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM DPDTGRSKG+GF+TF ++ A++A EQLNGFELAGRPM
Sbjct: 285 TEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECARRALEQLNGFELAGRPM 344
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + GG D E +DLG A GRLQLM KLAEG+G++LP
Sbjct: 345 RVGHVTER---LDGGTDITFPDGGEE--LDLGTAGGRLQLMAKLAEGSGIQLPTTAAAAQ 399
Query: 241 -------AASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
A L A L + +P ++ ++ IA+QCF L+++F P T
Sbjct: 400 AAALQLNGAVPLGALNPAALTALSPALNLASQ-AIASQCFQLSSLFTPQT 448
>gi|126277401|ref|XP_001369188.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Monodelphis
domestica]
Length = 415
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/290 (60%), Positives = 215/290 (74%), Gaps = 20/290 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 132 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 191
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 192 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 250
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM DPDTGRSKG+GF+TF ++ A++A EQLNGFELAGRPM
Sbjct: 251 TEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECARRALEQLNGFELAGRPM 310
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + GG D E +DLG A GRLQLM KLAEG+G++LP
Sbjct: 311 RVGHVTER---LDGGTDITFPDGGEE--LDLGTAGGRLQLMAKLAEGSGIQLPTTAAAAQ 365
Query: 241 -------AASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
A L A L + +P ++ ++ IA+QCF L+++F P T
Sbjct: 366 AAALQLNGAVPLGALNPAALTALSPALNLASQ-AIASQCFQLSSLFTPQT 414
>gi|410931844|ref|XP_003979305.1| PREDICTED: RNA-binding protein 39-like, partial [Takifugu rubripes]
Length = 324
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 198/244 (81%), Gaps = 8/244 (3%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAYIEF
Sbjct: 29 DNLTPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRMISDRSSRRSKGIAYIEFV 88
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLP------NLQPRGTGGPMRLYIG 120
+ SVPLA+GL GQ+LLG+PIIVQ +QAEKNRA NLQ +G GP+RLY+G
Sbjct: 89 EASSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAAAAAANNLQ-KGMMGPLRLYVG 147
Query: 121 SLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFE 180
SLHFNITE+MLRGIFEPFG+I+NIQLM+D DTGRSKGYGFITF A+ AKKA EQLNGFE
Sbjct: 148 SLHFNITEEMLRGIFEPFGRIENIQLMMDTDTGRSKGYGFITFADAECAKKALEQLNGFE 207
Query: 181 LAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPA 240
LAGRPMKVG VT+R++S G P+ LD +++ER+G+DLG GRLQLM +L+EG +EL A
Sbjct: 208 LAGRPMKVGHVTERSDS-SGAPAFLDGEDLERSGIDLGNPGRLQLMAQLSEGEKVELGSA 266
Query: 241 AASA 244
A
Sbjct: 267 EVKA 270
>gi|126277398|ref|XP_001369153.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Monodelphis
domestica]
Length = 433
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 174/290 (60%), Positives = 215/290 (74%), Gaps = 20/290 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 150 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 209
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 210 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 268
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM DPDTGRSKG+GF+TF ++ A++A EQLNGFELAGRPM
Sbjct: 269 TEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECARRALEQLNGFELAGRPM 328
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + GG D E +DLG A GRLQLM KLAEG+G++LP
Sbjct: 329 RVGHVTER---LDGGTDITFPDGGEE--LDLGTAGGRLQLMAKLAEGSGIQLPTTAAAAQ 383
Query: 241 -------AASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
A L A L + +P ++ ++ IA+QCF L+++F P T
Sbjct: 384 AAALQLNGAVPLGALNPAALTALSPALNLASQ-AIASQCFQLSSLFTPQT 432
>gi|358342556|dbj|GAA49996.1| RNA-binding protein 39 [Clonorchis sinensis]
Length = 730
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/266 (63%), Positives = 212/266 (79%), Gaps = 9/266 (3%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+L+PEERDART+F QLS RIR RDLE+FF+SVGK+RDVRLI NKT+R KGIAY+EF++
Sbjct: 70 ELTPEERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMDNKTKRSKGIAYVEFRE 129
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTG---GPMRLYIGSLHF 124
ES LA+GL G +LLG+PI +Q + AEKNR N +P++ P+ T GPM+LYIGSLH+
Sbjct: 130 VESAQLALGLTGTRLLGVPIQIQQSHAEKNRM-NAIPSV-PKPTQQNRGPMKLYIGSLHY 187
Query: 125 NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
NITE+ML+GIFEPFGKID+I+L+ DP TGRS+GYGF+T+ ++DDAKKA +QLNGFELAGR
Sbjct: 188 NITEEMLKGIFEPFGKIDDIKLIKDPATGRSQGYGFVTYANSDDAKKALDQLNGFELAGR 247
Query: 185 PMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASA 244
PMKV VT+R E S LD D+ +RAGVDLG TGRL LM KLAEGTGLE+P AA +
Sbjct: 248 PMKVNHVTERGEY--AALSALDNDDADRAGVDLGTTGRLALMAKLAEGTGLEIPKAALAQ 305
Query: 245 LNLAQN--AILNSSTPQVSSSTAPPI 268
L++AQN A+ ++S SS+ APP+
Sbjct: 306 LHIAQNNPALGSASGISSSSAVAPPV 331
>gi|390342940|ref|XP_001198098.2| PREDICTED: RNA-binding protein 39-like [Strongylocentrotus
purpuratus]
Length = 666
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 157/240 (65%), Positives = 190/240 (79%), Gaps = 1/240 (0%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
DD + RDART+F MQLSQR + R+L+EFFSSVGKVR V++IT +RR KG+ Y+E+
Sbjct: 198 DDPDADTRDARTVFVMQLSQRAKERELKEFFSSVGKVRTVKIITDRNSRRSKGVGYVEYD 257
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+SVPLA+GLN QKLLG+PIIVQP+ AEKNR+ LQ + GPMRLY+GSLH+NI
Sbjct: 258 VADSVPLALGLNNQKLLGVPIIVQPSHAEKNRSAGQNVTLQ-KVNSGPMRLYVGSLHYNI 316
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE MLRGIFEPFGKIDNIQLM+D D RSKGYGFITFH A+DAK+A +QLNGFELAGRPM
Sbjct: 317 TEAMLRGIFEPFGKIDNIQLMMDTDANRSKGYGFITFHDAEDAKRALDQLNGFELAGRPM 376
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KV VT+RNE PS LD++E+++ G+ L TGRLQLM KLAEGTG ++P AAA AL+
Sbjct: 377 KVNHVTERNEQGQQAPSFLDSEELDKRGITLNTTGRLQLMAKLAEGTGFQIPAAAAEALH 436
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 269 ATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
+T CF+L+NMFDP ET W+ +IRDDVIEECNKHG
Sbjct: 555 STACFMLSNMFDPQAETMLGWETDIRDDVIEECNKHG 591
>gi|332222976|ref|XP_003260645.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Nomascus
leucogenys]
Length = 442
Score = 323 bits (828), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 176/292 (60%), Positives = 216/292 (73%), Gaps = 21/292 (7%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 156 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 215
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 216 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 274
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 275 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 334
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELP------- 238
+VG VT+R + GG + E +DLG A GRLQLM KLAEG+G++LP
Sbjct: 335 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRLQLMAKLAEGSGIQLPTTATAAA 389
Query: 239 -----PAAASALNLAQNAILNSSTPQVSSSTAPPI--ATQCFLLANMFDPAT 283
A A+AL L L + P ++ +P + A+QCF L+++F P T
Sbjct: 390 AAAAAAAQAAALQLNGAVPLGALNPAALTALSPALNFASQCFQLSSLFTPQT 441
>gi|10880789|gb|AAG24388.1|AF275678_1 PP239 protein [Homo sapiens]
Length = 418
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 174/290 (60%), Positives = 212/290 (73%), Gaps = 19/290 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 134 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 193
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 194 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 252
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 253 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 312
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + GG + E +DLG A GR QLM KLAEG G++LP
Sbjct: 313 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLMAKLAEGAGIQLPSTAAAAA 367
Query: 241 -----AASALNLAQNAILNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A+AL L L + P ++ +P +A+QCF L+++F P T
Sbjct: 368 AAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 417
>gi|332222974|ref|XP_003260644.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Nomascus
leucogenys]
Length = 426
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 176/292 (60%), Positives = 216/292 (73%), Gaps = 21/292 (7%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 140 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 199
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 200 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 258
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 259 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 318
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELP------- 238
+VG VT+R + GG + E +DLG A GRLQLM KLAEG+G++LP
Sbjct: 319 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRLQLMAKLAEGSGIQLPTTATAAA 373
Query: 239 -----PAAASALNLAQNAILNSSTPQVSSSTAPPI--ATQCFLLANMFDPAT 283
A A+AL L L + P ++ +P + A+QCF L+++F P T
Sbjct: 374 AAAAAAAQAAALQLNGAVPLGALNPAALTALSPALNFASQCFQLSSLFTPQT 425
>gi|387539272|gb|AFJ70263.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 439
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/289 (60%), Positives = 214/289 (74%), Gaps = 18/289 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 156 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 215
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 216 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 274
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 275 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 334
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + GG + E +D G A GRLQLM KLAEG+G++LP
Sbjct: 335 RVGHVTERLD--GGTDITFPDGDQE---LDPGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 389
Query: 241 ----AASALNLAQNAILNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A+AL L L + P ++ +P +A+QCF L+++F P T
Sbjct: 390 AAAAHAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 438
>gi|410961880|ref|XP_003987506.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Felis catus]
Length = 445
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 175/295 (59%), Positives = 216/295 (73%), Gaps = 25/295 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 157 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 216
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 217 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 275
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 276 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 335
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASA- 244
+VG VT+R + GG + E +DLG A GRLQLM KLAEG+G++LP A+A
Sbjct: 336 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRLQLMAKLAEGSGMQLPTTTAAAA 390
Query: 245 ----------------LNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
L A L + +P ++ ++ IA+QCF L+++F P T
Sbjct: 391 AAAQAAAALQLNGTVPLGALNPAALTALSPALNLASQ-AIASQCFQLSSLFTPQT 444
>gi|410961884|ref|XP_003987508.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Felis catus]
Length = 411
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 175/295 (59%), Positives = 216/295 (73%), Gaps = 25/295 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 123 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 182
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 183 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 241
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 242 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 301
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASA- 244
+VG VT+R + GG + E +DLG A GRLQLM KLAEG+G++LP A+A
Sbjct: 302 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRLQLMAKLAEGSGMQLPTTTAAAA 356
Query: 245 ----------------LNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
L A L + +P ++ ++ IA+QCF L+++F P T
Sbjct: 357 AAAQAAAALQLNGTVPLGALNPAALTALSPALNLASQ-AIASQCFQLSSLFTPQT 410
>gi|12803481|gb|AAH02566.1| RNA binding motif protein 23 [Homo sapiens]
gi|189055004|dbj|BAG37988.1| unnamed protein product [Homo sapiens]
gi|312151810|gb|ADQ32417.1| RNA binding motif protein 23 [synthetic construct]
Length = 424
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 174/290 (60%), Positives = 212/290 (73%), Gaps = 19/290 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 140 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 199
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 200 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 258
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 259 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 318
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + GG + E +DLG A GR QLM KLAEG G++LP
Sbjct: 319 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLMAKLAEGAGIQLPSTAAAAA 373
Query: 241 -----AASALNLAQNAILNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A+AL L L + P ++ +P +A+QCF L+++F P T
Sbjct: 374 AAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 423
>gi|7022544|dbj|BAA91638.1| unnamed protein product [Homo sapiens]
Length = 406
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 174/290 (60%), Positives = 212/290 (73%), Gaps = 19/290 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 122 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 181
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 182 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 240
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 241 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 300
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + GG + E +DLG A GR QLM KLAEG G++LP
Sbjct: 301 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLMAKLAEGAGIQLPSTAAAAA 355
Query: 241 -----AASALNLAQNAILNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A+AL L L + P ++ +P +A+QCF L+++F P T
Sbjct: 356 AAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 405
>gi|383419607|gb|AFH33017.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 441
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 174/291 (59%), Positives = 214/291 (73%), Gaps = 20/291 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 156 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 215
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 216 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 274
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 275 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 334
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + GG + E +D G A GRLQLM KLAEG+G++LP
Sbjct: 335 RVGHVTERLD--GGTDITFPDGDQE---LDPGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 389
Query: 241 ------AASALNLAQNAILNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A+AL L L + P ++ +P +A+QCF L+++F P T
Sbjct: 390 AAAAAAHAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 440
>gi|410961882|ref|XP_003987507.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Felis catus]
Length = 429
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 175/295 (59%), Positives = 216/295 (73%), Gaps = 25/295 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 141 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 200
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 201 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 259
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 260 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 319
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASA- 244
+VG VT+R + GG + E +DLG A GRLQLM KLAEG+G++LP A+A
Sbjct: 320 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRLQLMAKLAEGSGMQLPTTTAAAA 374
Query: 245 ----------------LNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
L A L + +P ++ ++ IA+QCF L+++F P T
Sbjct: 375 AAAQAAAALQLNGTVPLGALNPAALTALSPALNLASQ-AIASQCFQLSSLFTPQT 428
>gi|355693134|gb|EHH27737.1| hypothetical protein EGK_18008 [Macaca mulatta]
Length = 441
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 174/291 (59%), Positives = 214/291 (73%), Gaps = 20/291 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 156 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 215
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 216 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 274
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 275 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 334
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + GG + E +D G A GRLQLM KLAEG+G++LP
Sbjct: 335 RVGHVTERLD--GGTDITFPDGDQE---LDPGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 389
Query: 241 ------AASALNLAQNAILNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A+AL L L + P ++ +P +A+QCF L+++F P T
Sbjct: 390 AAAAAAHAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 440
>gi|387539270|gb|AFJ70262.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 423
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/289 (60%), Positives = 214/289 (74%), Gaps = 18/289 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 140 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 199
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 200 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 258
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 259 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 318
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + GG + E +D G A GRLQLM KLAEG+G++LP
Sbjct: 319 RVGHVTERLD--GGTDITFPDGDQE---LDPGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 373
Query: 241 ----AASALNLAQNAILNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A+AL L L + P ++ +P +A+QCF L+++F P T
Sbjct: 374 AAAAHAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 422
>gi|388490330|ref|NP_001253303.1| probable RNA-binding protein 23 [Macaca mulatta]
gi|380814244|gb|AFE78996.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
gi|384947950|gb|AFI37580.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 441
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/291 (59%), Positives = 214/291 (73%), Gaps = 20/291 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 156 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 215
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 216 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 274
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 275 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 334
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + GG + E +D G A GRLQLM KLAEG+G++LP
Sbjct: 335 RVGHVTERLD--GGTDITFPDGDQE---LDPGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 389
Query: 241 ------AASALNLAQNAILNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A+AL L L + P ++ +P +A+QCF L+++F P T
Sbjct: 390 AAAAAAHAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 440
>gi|384947948|gb|AFI37579.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 425
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/291 (59%), Positives = 214/291 (73%), Gaps = 20/291 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 140 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 199
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 200 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 258
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 259 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 318
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + GG + E +D G A GRLQLM KLAEG+G++LP
Sbjct: 319 RVGHVTERLD--GGTDITFPDGDQE---LDPGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 373
Query: 241 ------AASALNLAQNAILNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A+AL L L + P ++ +P +A+QCF L+++F P T
Sbjct: 374 AAAAAAHAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 424
>gi|197102126|ref|NP_001124751.1| probable RNA-binding protein 23 [Pongo abelii]
gi|55725769|emb|CAH89665.1| hypothetical protein [Pongo abelii]
Length = 423
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/289 (60%), Positives = 216/289 (74%), Gaps = 18/289 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 140 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 199
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 200 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRPAAMANNLQ-KGSGGPMRLYVGSLHFNI 258
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 259 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 318
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GRLQLM KLAEG+G++LP AA+A
Sbjct: 319 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 373
Query: 246 NLAQNAI---------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A A L + P ++ +P +A+QCF L+++F P T
Sbjct: 374 AAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 422
>gi|380814242|gb|AFE78995.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
gi|383419605|gb|AFH33016.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 425
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/291 (59%), Positives = 214/291 (73%), Gaps = 20/291 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 140 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 199
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 200 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 258
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 259 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 318
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + GG + E +D G A GRLQLM KLAEG+G++LP
Sbjct: 319 RVGHVTERLD--GGTDITFPDGDQE---LDPGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 373
Query: 241 ------AASALNLAQNAILNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A+AL L L + P ++ +P +A+QCF L+++F P T
Sbjct: 374 AAAAAAHAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 424
>gi|296214508|ref|XP_002753659.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Callithrix
jacchus]
Length = 439
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 175/290 (60%), Positives = 216/290 (74%), Gaps = 19/290 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 155 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 214
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +GTGGPMRLY+GSLHFNI
Sbjct: 215 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGTGGPMRLYVGSLHFNI 273
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A +QLNGFELAGRPM
Sbjct: 274 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAMDQLNGFELAGRPM 333
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPP------ 239
+VG VT++ + GG + E +DLG A G LQLM KLAEG+G++LP
Sbjct: 334 RVGHVTEQLD--GGTDITFPDGDQE---LDLGSAGGCLQLMAKLAEGSGIQLPSTTATAA 388
Query: 240 ----AAASALNLAQNAILNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A A+AL L L + P V ++ +P +A+QCF L+++F P T
Sbjct: 389 AAAAAQAAALQLNGAVPLGALNPAVLTALSPALNLASQCFQLSSLFTPQT 438
>gi|355778434|gb|EHH63470.1| hypothetical protein EGM_16442, partial [Macaca fascicularis]
Length = 366
Score = 320 bits (820), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 174/291 (59%), Positives = 214/291 (73%), Gaps = 20/291 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 81 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 140
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 141 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 199
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 200 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 259
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + GG + E +D G A GRLQLM KLAEG+G++LP
Sbjct: 260 RVGHVTERLD--GGTDITFPDGDQE---LDPGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 314
Query: 241 ------AASALNLAQNAILNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A+AL L L + P ++ +P +A+QCF L+++F P T
Sbjct: 315 AAAAAAHAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 365
>gi|73962357|ref|XP_537365.2| PREDICTED: probable RNA-binding protein 23 isoform 1 [Canis lupus
familiaris]
Length = 445
Score = 320 bits (819), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 176/295 (59%), Positives = 216/295 (73%), Gaps = 25/295 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 157 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 216
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 217 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSSGPMRLYVGSLHFNI 275
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 276 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 335
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASA- 244
+VG VT+R + GG E E +DLG A GRLQLM KLAEG+G++LP AA+A
Sbjct: 336 RVGHVTERLD--GGTDITFPDGEQE---LDLGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 390
Query: 245 ----------------LNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
L A L + +P ++ ++ IA+QCF L+++F P T
Sbjct: 391 AAAQAAAALQLNGTVPLGGLNPAALTALSPALNLASQ-AIASQCFQLSSLFTPQT 444
>gi|301781268|ref|XP_002926045.1| PREDICTED: probable RNA-binding protein 23-like isoform 1
[Ailuropoda melanoleuca]
Length = 446
Score = 320 bits (819), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 175/295 (59%), Positives = 216/295 (73%), Gaps = 25/295 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 158 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 217
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 218 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSSGPMRLYVGSLHFNI 276
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 277 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 336
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASA- 244
+VG VT+R + GG + E +DLG A GRLQLM KLAEG+G++LP AA+A
Sbjct: 337 RVGQVTERLD--GGIDITFPDGDQE---LDLGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 391
Query: 245 ----------------LNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
L A L + +P ++ ++ IA+QCF L+++F P T
Sbjct: 392 AAAQAAAALQLNGTVPLGALNPAALTALSPALNLASQ-AIASQCFQLSSLFTPQT 445
>gi|116734696|ref|NP_001070819.1| probable RNA-binding protein 23 isoform 1 [Homo sapiens]
gi|34925229|sp|Q86U06.1|RBM23_HUMAN RecName: Full=Probable RNA-binding protein 23; AltName:
Full=RNA-binding motif protein 23; AltName:
Full=RNA-binding region-containing protein 4; AltName:
Full=Splicing factor SF2
gi|28071058|emb|CAD61910.1| unnamed protein product [Homo sapiens]
gi|119586629|gb|EAW66225.1| RNA binding motif protein 23, isoform CRA_d [Homo sapiens]
Length = 439
Score = 320 bits (819), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 175/289 (60%), Positives = 213/289 (73%), Gaps = 18/289 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 156 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 215
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 216 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 274
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 275 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 334
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GR QLM KLAEG G++LP AA+A
Sbjct: 335 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLMAKLAEGAGIQLPSTAAAAA 389
Query: 246 NLAQNAI---------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A A L + P ++ +P +A+QCF L+++F P T
Sbjct: 390 AAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 438
>gi|73962355|ref|XP_848788.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Canis lupus
familiaris]
Length = 429
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 176/295 (59%), Positives = 216/295 (73%), Gaps = 25/295 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 141 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 200
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 201 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSSGPMRLYVGSLHFNI 259
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 260 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 319
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASA- 244
+VG VT+R + GG E E +DLG A GRLQLM KLAEG+G++LP AA+A
Sbjct: 320 RVGHVTERLD--GGTDITFPDGEQE---LDLGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 374
Query: 245 ----------------LNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
L A L + +P ++ ++ IA+QCF L+++F P T
Sbjct: 375 AAAQAAAALQLNGTVPLGGLNPAALTALSPALNLASQ-AIASQCFQLSSLFTPQT 428
>gi|345804022|ref|XP_003435135.1| PREDICTED: probable RNA-binding protein 23 [Canis lupus familiaris]
Length = 411
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 176/295 (59%), Positives = 216/295 (73%), Gaps = 25/295 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 123 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 182
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 183 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSSGPMRLYVGSLHFNI 241
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 242 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 301
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASA- 244
+VG VT+R + GG E E +DLG A GRLQLM KLAEG+G++LP AA+A
Sbjct: 302 RVGHVTERLD--GGTDITFPDGEQE---LDLGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 356
Query: 245 ----------------LNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
L A L + +P ++ ++ IA+QCF L+++F P T
Sbjct: 357 AAAQAAAALQLNGTVPLGGLNPAALTALSPALNLASQ-AIASQCFQLSSLFTPQT 410
>gi|261858408|dbj|BAI45726.1| RNA binding motif protein 23 [synthetic construct]
Length = 406
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 173/290 (59%), Positives = 211/290 (72%), Gaps = 19/290 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 122 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 181
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 182 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 240
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 241 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 300
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + GG + E +DLG A GR QLM KLAEG G++LP
Sbjct: 301 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLMAKLAEGAGIQLPSTAAAAA 355
Query: 241 -----AASALNLAQNAILNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A+AL L L + P ++ +P +A+QC L+++F P T
Sbjct: 356 AAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCLQLSSLFTPQT 405
>gi|301781270|ref|XP_002926046.1| PREDICTED: probable RNA-binding protein 23-like isoform 2
[Ailuropoda melanoleuca]
Length = 430
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 175/295 (59%), Positives = 216/295 (73%), Gaps = 25/295 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 142 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 201
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 202 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSSGPMRLYVGSLHFNI 260
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 261 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 320
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASA- 244
+VG VT+R + GG + E +DLG A GRLQLM KLAEG+G++LP AA+A
Sbjct: 321 RVGQVTERLD--GGIDITFPDGDQE---LDLGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 375
Query: 245 ----------------LNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
L A L + +P ++ ++ IA+QCF L+++F P T
Sbjct: 376 AAAQAAAALQLNGTVPLGALNPAALTALSPALNLASQ-AIASQCFQLSSLFTPQT 429
>gi|116734694|ref|NP_060577.3| probable RNA-binding protein 23 isoform 2 [Homo sapiens]
gi|18848317|gb|AAH24208.1| RNA binding motif protein 23 [Homo sapiens]
gi|119586627|gb|EAW66223.1| RNA binding motif protein 23, isoform CRA_b [Homo sapiens]
gi|119586633|gb|EAW66229.1| RNA binding motif protein 23, isoform CRA_b [Homo sapiens]
Length = 423
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 175/289 (60%), Positives = 213/289 (73%), Gaps = 18/289 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 140 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 199
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 200 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 258
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 259 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 318
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GR QLM KLAEG G++LP AA+A
Sbjct: 319 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLMAKLAEGAGIQLPSTAAAAA 373
Query: 246 NLAQNAI---------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A A L + P ++ +P +A+QCF L+++F P T
Sbjct: 374 AAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 422
>gi|116734698|ref|NP_001070820.1| probable RNA-binding protein 23 isoform 3 [Homo sapiens]
gi|119586628|gb|EAW66224.1| RNA binding motif protein 23, isoform CRA_c [Homo sapiens]
Length = 405
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 175/289 (60%), Positives = 213/289 (73%), Gaps = 18/289 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 122 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 181
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 182 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 240
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 241 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 300
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GR QLM KLAEG G++LP AA+A
Sbjct: 301 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLMAKLAEGAGIQLPSTAAAAA 355
Query: 246 NLAQNAI---------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A A L + P ++ +P +A+QCF L+++F P T
Sbjct: 356 AAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 404
>gi|301781272|ref|XP_002926047.1| PREDICTED: probable RNA-binding protein 23-like isoform 3
[Ailuropoda melanoleuca]
Length = 412
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 175/295 (59%), Positives = 216/295 (73%), Gaps = 25/295 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 124 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 183
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 184 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSSGPMRLYVGSLHFNI 242
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 243 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 302
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASA- 244
+VG VT+R + GG + E +DLG A GRLQLM KLAEG+G++LP AA+A
Sbjct: 303 RVGQVTERLD--GGIDITFPDGDQE---LDLGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 357
Query: 245 ----------------LNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
L A L + +P ++ ++ IA+QCF L+++F P T
Sbjct: 358 AAAQAAAALQLNGTVPLGALNPAALTALSPALNLASQ-AIASQCFQLSSLFTPQT 411
>gi|395859409|ref|XP_003802032.1| PREDICTED: probable RNA-binding protein 23 [Otolemur garnettii]
Length = 449
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/295 (58%), Positives = 214/295 (72%), Gaps = 25/295 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 161 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 220
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+ GPM L++GSLHFNI
Sbjct: 221 EIQSVPLAIGLTGQQLLGVPIIVQASQAEKNRLAAMANNLQ-KGSSGPMHLFVGSLHFNI 279
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 280 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 339
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGAT-GRLQLMFKLAEGTGLELPPA----- 240
KVG VT+R + GG + E +DLG+T GRLQLM KLAEG+G++LP A
Sbjct: 340 KVGQVTERLD--GGTDITFPDGDQE---LDLGSTGGRLQLMAKLAEGSGIQLPTAAATAA 394
Query: 241 ------------AASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
A L A L + +P ++ ++ IA+QCF L+++F P T
Sbjct: 395 AAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQ-AIASQCFQLSSLFTPQT 448
>gi|281343373|gb|EFB18957.1| hypothetical protein PANDA_015655 [Ailuropoda melanoleuca]
Length = 369
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 175/295 (59%), Positives = 216/295 (73%), Gaps = 25/295 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 81 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 140
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+ GPMRLY+GSLHFNI
Sbjct: 141 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSSGPMRLYVGSLHFNI 199
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 200 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 259
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASA- 244
+VG VT+R + GG + E +DLG A GRLQLM KLAEG+G++LP AA+A
Sbjct: 260 RVGQVTERLD--GGIDITFPDGDQE---LDLGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 314
Query: 245 ----------------LNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
L A L + +P ++ ++ IA+QCF L+++F P T
Sbjct: 315 AAAQAAAALQLNGTVPLGALNPAALTALSPALNLASQ-AIASQCFQLSSLFTPQT 368
>gi|119586626|gb|EAW66222.1| RNA binding motif protein 23, isoform CRA_a [Homo sapiens]
Length = 483
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 175/289 (60%), Positives = 213/289 (73%), Gaps = 18/289 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 200 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 259
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 260 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 318
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 319 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 378
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GR QLM KLAEG G++LP AA+A
Sbjct: 379 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLMAKLAEGAGIQLPSTAAAAA 433
Query: 246 NLAQNAI---------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A A L + P ++ +P +A+QCF L+++F P T
Sbjct: 434 AAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 482
>gi|397473313|ref|XP_003808159.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Pan paniscus]
Length = 442
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/292 (59%), Positives = 212/292 (72%), Gaps = 21/292 (7%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 156 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 215
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 216 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 274
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 275 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 334
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GR QLM KLAEG G++LP A +A
Sbjct: 335 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLMAKLAEGAGIQLPSTATAAA 389
Query: 246 NLAQNAI------------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A A L + P ++ +P +A+QCF L+++F P T
Sbjct: 390 AAAAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 441
>gi|156363387|ref|XP_001626026.1| predicted protein [Nematostella vectensis]
gi|156212886|gb|EDO33926.1| predicted protein [Nematostella vectensis]
Length = 468
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 161/299 (53%), Positives = 209/299 (69%), Gaps = 17/299 (5%)
Query: 10 SPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPE 69
S EE+D RT+FCMQL++ IR RDLEEFFS VG+V DVR+I+ +RR KGIAYIEF D
Sbjct: 112 SAEEKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKS 171
Query: 70 SVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNL-QPRGTGGPMRLYIGSLHFNITE 128
+VPLA+GL+GQKLLG PI+V TQAEKNR L QP G P RLY+GSLHFNITE
Sbjct: 172 AVPLAIGLSGQKLLGAPIMVMLTQAEKNRLAAEAERLKQPLG---PTRLYVGSLHFNITE 228
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
M++ +FEPFG +D++QL+ D +T RSKGYGF+ F A+ AK+A EQ+NGFELAGRP+K+
Sbjct: 229 AMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQMNGFELAGRPLKI 288
Query: 189 GTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEG--TGLELPPAAASALN 246
G VT+R +S S LD +E E+ GV+L ++ R LM KL++G GL +P A
Sbjct: 289 GPVTERGDS--SAYSFLDDEEYEKGGVELNSSARAALMAKLSQGHSAGLSVPGAP----- 341
Query: 247 LAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
I++ +++ A + T CF+L NMFDP E + WD++IRDDV+EECNK G
Sbjct: 342 ----PIVSGVQQALATPVAVSLPTPCFMLTNMFDPTKERDAGWDLDIRDDVLEECNKFG 396
>gi|119586630|gb|EAW66226.1| RNA binding motif protein 23, isoform CRA_e [Homo sapiens]
Length = 449
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 175/289 (60%), Positives = 213/289 (73%), Gaps = 18/289 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 166 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 225
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 226 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 284
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 285 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 344
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GR QLM KLAEG G++LP AA+A
Sbjct: 345 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLMAKLAEGAGIQLPSTAAAAA 399
Query: 246 NLAQNAI---------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A A L + P ++ +P +A+QCF L+++F P T
Sbjct: 400 AAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 448
>gi|119586634|gb|EAW66230.1| RNA binding motif protein 23, isoform CRA_h [Homo sapiens]
Length = 467
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 175/289 (60%), Positives = 213/289 (73%), Gaps = 18/289 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 184 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 243
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 244 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 302
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 303 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 362
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GR QLM KLAEG G++LP AA+A
Sbjct: 363 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLMAKLAEGAGIQLPSTAAAAA 417
Query: 246 NLAQNAI---------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A A L + P ++ +P +A+QCF L+++F P T
Sbjct: 418 AAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 466
>gi|397473311|ref|XP_003808158.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Pan paniscus]
Length = 426
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 174/292 (59%), Positives = 212/292 (72%), Gaps = 21/292 (7%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 140 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 199
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 200 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 258
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 259 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 318
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GR QLM KLAEG G++LP A +A
Sbjct: 319 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLMAKLAEGAGIQLPSTATAAA 373
Query: 246 NLAQNAI------------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A A L + P ++ +P +A+QCF L+++F P T
Sbjct: 374 AAAAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 425
>gi|397473315|ref|XP_003808160.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Pan paniscus]
Length = 408
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 174/292 (59%), Positives = 212/292 (72%), Gaps = 21/292 (7%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 122 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 181
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 182 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 240
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 241 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 300
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GR QLM KLAEG G++LP A +A
Sbjct: 301 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLMAKLAEGAGIQLPSTATAAA 355
Query: 246 NLAQNAI------------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A A L + P ++ +P +A+QCF L+++F P T
Sbjct: 356 AAAAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 407
>gi|149756182|ref|XP_001494921.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Equus
caballus]
Length = 412
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 169/294 (57%), Positives = 215/294 (73%), Gaps = 24/294 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 125 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 184
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 185 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 243
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 244 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 303
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATG-RLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + G +++ + ++ +DLG+ G RLQLM KLAEG+G++LP
Sbjct: 304 RVGHVTERLD----GSTDITFPDGDQE-LDLGSAGSRLQLMAKLAEGSGIQLPTTAAAAA 358
Query: 241 -----------AASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
A L L + +P ++ ++ IA+QCF L+++F T
Sbjct: 359 AAAQAAALQLNGAVPLGALNPTALTALSPALNLASQ-AIASQCFQLSSLFTSQT 411
>gi|402875680|ref|XP_003901625.1| PREDICTED: probable RNA-binding protein 23 [Papio anubis]
Length = 497
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 173/292 (59%), Positives = 213/292 (72%), Gaps = 21/292 (7%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 211 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 270
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 271 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 329
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTG SKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 330 TEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAGRPM 389
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + GG + E +D G A GRLQLM KLAEG+G++LP
Sbjct: 390 RVGHVTERLD--GGTDITFPDGDQE---LDPGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 444
Query: 241 -------AASALNLAQNAILNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A+AL L L + P ++ +P +A+QCF L+++F P T
Sbjct: 445 AAAAAAAHAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 496
>gi|426232774|ref|XP_004010395.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Ovis aries]
Length = 463
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 172/298 (57%), Positives = 216/298 (72%), Gaps = 27/298 (9%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 171 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 230
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR T NLQ +G+GGP+RLY+GSLHFNI
Sbjct: 231 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAATASNLQ-KGSGGPVRLYVGSLHFNI 289
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D +TG SKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 290 TEDMLRGIFEPFGKIDNIVLMKDSETGCSKGYGFITFSDSECARRALEQLNGFELAGRPM 349
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAA---- 241
++G VT+R + GG + E +DLG A GRLQL+ KLAEG+G++LP +
Sbjct: 350 RIGHVTERPD--GGTDITFPDGDQE---LDLGSAGGRLQLVAKLAEGSGIQLPTSTAAAA 404
Query: 242 ---------ASALNLAQNAILNSSTPQVSSSTAP-------PIATQCFLLANMFDPAT 283
A+AL L L + P ++ +P IA+QCF L+++F P T
Sbjct: 405 AVAQAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQAIASQCFQLSSLFTPQT 462
>gi|149756178|ref|XP_001494868.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Equus
caballus]
Length = 446
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 169/294 (57%), Positives = 215/294 (73%), Gaps = 24/294 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 159 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 218
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 219 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 277
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 278 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 337
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATG-RLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + G +++ + ++ +DLG+ G RLQLM KLAEG+G++LP
Sbjct: 338 RVGHVTERLD----GSTDITFPDGDQE-LDLGSAGSRLQLMAKLAEGSGIQLPTTAAAAA 392
Query: 241 -----------AASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
A L L + +P ++ ++ IA+QCF L+++F T
Sbjct: 393 AAAQAAALQLNGAVPLGALNPTALTALSPALNLASQ-AIASQCFQLSSLFTSQT 445
>gi|149756180|ref|XP_001494897.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Equus
caballus]
Length = 430
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 169/294 (57%), Positives = 215/294 (73%), Gaps = 24/294 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 143 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 203 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 261
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 262 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 321
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATG-RLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + G +++ + ++ +DLG+ G RLQLM KLAEG+G++LP
Sbjct: 322 RVGHVTERLD----GSTDITFPDGDQE-LDLGSAGSRLQLMAKLAEGSGIQLPTTAAAAA 376
Query: 241 -----------AASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
A L L + +P ++ ++ IA+QCF L+++F T
Sbjct: 377 AAAQAAALQLNGAVPLGALNPTALTALSPALNLASQ-AIASQCFQLSSLFTSQT 429
>gi|426232776|ref|XP_004010396.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Ovis aries]
Length = 447
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 172/298 (57%), Positives = 216/298 (72%), Gaps = 27/298 (9%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 155 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 214
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR T NLQ +G+GGP+RLY+GSLHFNI
Sbjct: 215 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAATASNLQ-KGSGGPVRLYVGSLHFNI 273
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D +TG SKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 274 TEDMLRGIFEPFGKIDNIVLMKDSETGCSKGYGFITFSDSECARRALEQLNGFELAGRPM 333
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAA---- 241
++G VT+R + GG + E +DLG A GRLQL+ KLAEG+G++LP +
Sbjct: 334 RIGHVTERPD--GGTDITFPDGDQE---LDLGSAGGRLQLVAKLAEGSGIQLPTSTAAAA 388
Query: 242 ---------ASALNLAQNAILNSSTPQVSSSTAP-------PIATQCFLLANMFDPAT 283
A+AL L L + P ++ +P IA+QCF L+++F P T
Sbjct: 389 AVAQAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQAIASQCFQLSSLFTPQT 446
>gi|48146631|emb|CAG33538.1| RNPC4 [Homo sapiens]
Length = 423
Score = 317 bits (811), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 174/289 (60%), Positives = 212/289 (73%), Gaps = 18/289 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 140 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 199
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 200 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 258
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYG ITF ++ A++A EQLNGFELAGRPM
Sbjct: 259 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGLITFSDSECARRALEQLNGFELAGRPM 318
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GR QLM KLAEG G++LP AA+A
Sbjct: 319 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLMAKLAEGAGIQLPSTAAAAA 373
Query: 246 NLAQNAI---------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A A L + P ++ +P +A+QCF L+++F P T
Sbjct: 374 AAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 422
>gi|444728803|gb|ELW69245.1| putative RNA-binding protein 23 [Tupaia chinensis]
Length = 450
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 171/287 (59%), Positives = 210/287 (73%), Gaps = 31/287 (10%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 144 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 203
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 204 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 262
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 263 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 322
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + G +++ + ++ +DLG A GRLQLM KLAE A + AL
Sbjct: 323 RVGHVTERAD----GSTDITFPDGDQE-LDLGSAGGRLQLMAKLAE--------ALSPAL 369
Query: 246 NLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVE 292
NLA A IA+QCF L+++F P T D++
Sbjct: 370 NLASQA----------------IASQCFQLSSLFTPQTIHPEDMDID 400
>gi|291403539|ref|XP_002718108.1| PREDICTED: RNA binding motif protein 23 isoform 1 [Oryctolagus
cuniculus]
Length = 410
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 169/292 (57%), Positives = 216/292 (73%), Gaps = 21/292 (7%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+ CMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 124 DNLSPEERDARTVLCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 183
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D ++VPLA+GL GQ+LLG+PI+VQ +QAEKNR NLQ +G+GGP+RLY+GSLHFNI
Sbjct: 184 DIQAVPLAIGLTGQRLLGVPIMVQASQAEKNRLAAMANNLQ-KGSGGPLRLYVGSLHFNI 242
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ ++A EQLNGFELAGRPM
Sbjct: 243 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECGRRALEQLNGFELAGRPM 302
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGAT-GRLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + G +++ + ++ +DLG+ GRLQLM KLAEG+G++LP
Sbjct: 303 RVGHVTERPD----GTTDITFPDGDQE-LDLGSPGGRLQLMAKLAEGSGIQLPTTAVAAA 357
Query: 241 --AASALNLAQNAILNSSTPQVSSSTAP-------PIATQCFLLANMFDPAT 283
A+AL L L + P ++ +P IA+QCF L+++F P T
Sbjct: 358 AAQAAALQLNGAVPLGALNPAALTALSPALNLASQAIASQCFQLSSLFTPQT 409
>gi|291403543|ref|XP_002718110.1| PREDICTED: RNA binding motif protein 23 isoform 3 [Oryctolagus
cuniculus]
Length = 428
Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 169/292 (57%), Positives = 216/292 (73%), Gaps = 21/292 (7%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+ CMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 142 DNLSPEERDARTVLCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 201
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D ++VPLA+GL GQ+LLG+PI+VQ +QAEKNR NLQ +G+GGP+RLY+GSLHFNI
Sbjct: 202 DIQAVPLAIGLTGQRLLGVPIMVQASQAEKNRLAAMANNLQ-KGSGGPLRLYVGSLHFNI 260
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ ++A EQLNGFELAGRPM
Sbjct: 261 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECGRRALEQLNGFELAGRPM 320
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGAT-GRLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + G +++ + ++ +DLG+ GRLQLM KLAEG+G++LP
Sbjct: 321 RVGHVTERPD----GTTDITFPDGDQE-LDLGSPGGRLQLMAKLAEGSGIQLPTTAVAAA 375
Query: 241 --AASALNLAQNAILNSSTPQVSSSTAP-------PIATQCFLLANMFDPAT 283
A+AL L L + P ++ +P IA+QCF L+++F P T
Sbjct: 376 AAQAAALQLNGAVPLGALNPAALTALSPALNLASQAIASQCFQLSSLFTPQT 427
>gi|291403541|ref|XP_002718109.1| PREDICTED: RNA binding motif protein 23 isoform 2 [Oryctolagus
cuniculus]
Length = 444
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 169/292 (57%), Positives = 216/292 (73%), Gaps = 21/292 (7%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+ CMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 158 DNLSPEERDARTVLCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 217
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D ++VPLA+GL GQ+LLG+PI+VQ +QAEKNR NLQ +G+GGP+RLY+GSLHFNI
Sbjct: 218 DIQAVPLAIGLTGQRLLGVPIMVQASQAEKNRLAAMANNLQ-KGSGGPLRLYVGSLHFNI 276
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ ++A EQLNGFELAGRPM
Sbjct: 277 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECGRRALEQLNGFELAGRPM 336
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGAT-GRLQLMFKLAEGTGLELPPA----- 240
+VG VT+R + G +++ + ++ +DLG+ GRLQLM KLAEG+G++LP
Sbjct: 337 RVGHVTERPD----GTTDITFPDGDQE-LDLGSPGGRLQLMAKLAEGSGIQLPTTAVAAA 391
Query: 241 --AASALNLAQNAILNSSTPQVSSSTAP-------PIATQCFLLANMFDPAT 283
A+AL L L + P ++ +P IA+QCF L+++F P T
Sbjct: 392 AAQAAALQLNGAVPLGALNPAALTALSPALNLASQAIASQCFQLSSLFTPQT 443
>gi|410218752|gb|JAA06595.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307724|gb|JAA32462.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307728|gb|JAA32464.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 442
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/292 (59%), Positives = 211/292 (72%), Gaps = 21/292 (7%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 156 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 215
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 216 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 274
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTG SKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 275 TEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAGRPM 334
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GR QLM KLAEG G++LP A +A
Sbjct: 335 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLMAKLAEGAGIQLPSTATAAA 389
Query: 246 NLAQNAI------------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A A L + P ++ +P +A+QCF L+++F P T
Sbjct: 390 AAAAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 441
>gi|410218750|gb|JAA06594.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307726|gb|JAA32463.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 426
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/292 (59%), Positives = 211/292 (72%), Gaps = 21/292 (7%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 140 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 199
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 200 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 258
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTG SKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 259 TEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAGRPM 318
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GR QLM KLAEG G++LP A +A
Sbjct: 319 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLMAKLAEGAGIQLPSTATAAA 373
Query: 246 NLAQNAI------------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A A L + P ++ +P +A+QCF L+++F P T
Sbjct: 374 AAAAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 425
>gi|426376372|ref|XP_004054975.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Gorilla
gorilla gorilla]
Length = 437
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 174/287 (60%), Positives = 213/287 (74%), Gaps = 16/287 (5%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 156 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 215
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 216 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 274
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 275 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 334
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GRLQLM KLAEG G++LP A +A
Sbjct: 335 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRLQLMAKLAEGAGIQLPTTATAAA 389
Query: 246 NLAQNAI-------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A+ L + P ++ +P +A+QCF L+++F P T
Sbjct: 390 AAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 436
>gi|327289313|ref|XP_003229369.1| PREDICTED: probable RNA-binding protein 23-like [Anolis
carolinensis]
Length = 445
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 170/285 (59%), Positives = 212/285 (74%), Gaps = 11/285 (3%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF +
Sbjct: 161 LSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEI 220
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
+SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLH NIT+
Sbjct: 221 QSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHCNITK 279
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+MLRGIFEPFGKID+I LM D DTG+SKGYGFITF A+ A++A EQLNGFELAGRPM+V
Sbjct: 280 EMLRGIFEPFGKIDSIVLMRDQDTGQSKGYGFITFSEAECARRALEQLNGFELAGRPMRV 339
Query: 189 GTVTDRNESVGGGPSNLDTDEMERAGVDLGATG-RLQLMFKLAEGTGLELPPAAASALNL 247
G VT+R + DE +R+G++LGATG +LQLM KLAEG+GL L AA+ L
Sbjct: 340 GQVTERLDGTTDITFPDGNDEPDRSGLNLGATGSQLQLMAKLAEGSGLPLSTTAAAQAAL 399
Query: 248 AQNAI--LNSSTPQVSSSTAPP-------IATQCFLLANMFDPAT 283
N L + P ++ +P +A+QCF L+ +F P T
Sbjct: 400 QLNGAIPLGALNPAALTALSPALNLASQTLASQCFQLSGLFTPQT 444
>gi|114652057|ref|XP_001159475.1| PREDICTED: probable RNA-binding protein 23 isoform 10 [Pan
troglodytes]
Length = 442
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 172/292 (58%), Positives = 211/292 (72%), Gaps = 21/292 (7%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 156 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 215
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 216 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 274
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTG SKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 275 TEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAGRPM 334
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GR QL+ KLAEG G++LP A +A
Sbjct: 335 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLIAKLAEGAGIQLPSTATAAA 389
Query: 246 NLAQNAI------------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A A L + P ++ +P +A+QCF L+++F P T
Sbjct: 390 AAAAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 441
>gi|410261842|gb|JAA18887.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349771|gb|JAA41489.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 442
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 172/292 (58%), Positives = 211/292 (72%), Gaps = 21/292 (7%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 156 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 215
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 216 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 274
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTG SKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 275 TEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAGRPM 334
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GR QL+ KLAEG G++LP A +A
Sbjct: 335 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLIAKLAEGAGIQLPSTATAAA 389
Query: 246 NLAQNAI------------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A A L + P ++ +P +A+QCF L+++F P T
Sbjct: 390 AAAAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 441
>gi|426376374|ref|XP_004054976.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Gorilla
gorilla gorilla]
Length = 403
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 174/287 (60%), Positives = 213/287 (74%), Gaps = 16/287 (5%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 122 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 181
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 182 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 240
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 241 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 300
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GRLQLM KLAEG G++LP A +A
Sbjct: 301 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRLQLMAKLAEGAGIQLPTTATAAA 355
Query: 246 NLAQNAI-------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A+ L + P ++ +P +A+QCF L+++F P T
Sbjct: 356 AAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 402
>gi|426376370|ref|XP_004054974.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Gorilla
gorilla gorilla]
Length = 421
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 174/287 (60%), Positives = 213/287 (74%), Gaps = 16/287 (5%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 140 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 199
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 200 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 258
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 259 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 318
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GRLQLM KLAEG G++LP A +A
Sbjct: 319 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRLQLMAKLAEGAGIQLPTTATAAA 373
Query: 246 NLAQNAI-------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A+ L + P ++ +P +A+QCF L+++F P T
Sbjct: 374 AAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 420
>gi|114652071|ref|XP_522797.2| PREDICTED: probable RNA-binding protein 23 isoform 12 [Pan
troglodytes]
Length = 408
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 172/292 (58%), Positives = 211/292 (72%), Gaps = 21/292 (7%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 122 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 181
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 182 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 240
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTG SKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 241 TEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAGRPM 300
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GR QL+ KLAEG G++LP A +A
Sbjct: 301 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLIAKLAEGAGIQLPSTATAAA 355
Query: 246 NLAQNAI------------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A A L + P ++ +P +A+QCF L+++F P T
Sbjct: 356 AAAAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 407
>gi|114652069|ref|XP_001159523.1| PREDICTED: probable RNA-binding protein 23 isoform 11 [Pan
troglodytes]
Length = 426
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 172/292 (58%), Positives = 211/292 (72%), Gaps = 21/292 (7%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 140 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 199
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 200 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 258
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTG SKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 259 TEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAGRPM 318
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GR QL+ KLAEG G++LP A +A
Sbjct: 319 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLIAKLAEGAGIQLPSTATAAA 373
Query: 246 NLAQNAI------------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A A L + P ++ +P +A+QCF L+++F P T
Sbjct: 374 AAAAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 425
>gi|410261840|gb|JAA18886.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349769|gb|JAA41488.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349773|gb|JAA41490.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 426
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 172/292 (58%), Positives = 211/292 (72%), Gaps = 21/292 (7%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 140 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 199
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 200 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 258
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTG SKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 259 TEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAGRPM 318
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASAL 245
+VG VT+R + GG + E +DLG A GR QL+ KLAEG G++LP A +A
Sbjct: 319 RVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLIAKLAEGAGIQLPSTATAAA 373
Query: 246 NLAQNAI------------LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A A L + P ++ +P +A+QCF L+++F P T
Sbjct: 374 AAAAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 425
>gi|444729178|gb|ELW69605.1| RNA-binding protein 39 [Tupaia chinensis]
Length = 467
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 162/301 (53%), Positives = 205/301 (68%), Gaps = 50/301 (16%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +Q
Sbjct: 203 DVSSVPLAIGLTGQRVLGVPIIVQASQ--------------------------------- 229
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 230 --------------IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 275
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 276 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 334
Query: 247 LAQNAILN--SSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKH 304
++ + +++ ++++ P+ATQCF L+NMF+P TE WD EI+DDVIEECNKH
Sbjct: 335 MSGSLAFGAVAASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKH 394
Query: 305 G 305
G
Sbjct: 395 G 395
>gi|395830356|ref|XP_003788297.1| PREDICTED: RNA-binding protein 39 [Otolemur garnettii]
Length = 453
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/313 (53%), Positives = 206/313 (65%), Gaps = 63/313 (20%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 118 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 177
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SVPLA+GL GQ++LG+PIIVQ +Q
Sbjct: 178 DVSSVPLAIGLTGQRVLGVPIIVQASQ--------------------------------- 204
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
I++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPM
Sbjct: 205 --------------IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPM 250
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL- 245
KVG VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL
Sbjct: 251 KVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 309
Query: 246 ---NLAQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVE 292
+LA A+ + T ++S T P+ATQCF L+NMF+P TE WD E
Sbjct: 310 MSGSLAFGAVADLQT-RLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTE 368
Query: 293 IRDDVIEECNKHG 305
I+DDVIEECNKHG
Sbjct: 369 IKDDVIEECNKHG 381
>gi|115497272|ref|NP_001069104.1| probable RNA-binding protein 23 [Bos taurus]
gi|113911797|gb|AAI22594.1| RNA binding motif protein 23 [Bos taurus]
Length = 463
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/298 (57%), Positives = 212/298 (71%), Gaps = 27/298 (9%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 171 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 230
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGP+RLY+GSLH NI
Sbjct: 231 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPVRLYVGSLHCNI 289
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGI EPFGKIDNI LM D +TGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 290 TEDMLRGILEPFGKIDNIVLMKDSETGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 349
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAA---- 241
++G VT+R + GG + E +DLG A G LQLM KLAEG+G++LP
Sbjct: 350 RIGHVTERPD--GGTDITFPDGDQE---LDLGSAGGHLQLMAKLAEGSGIQLPTTTAAAA 404
Query: 242 ---------ASALNLAQNAILNSSTPQVSSSTAP-------PIATQCFLLANMFDPAT 283
A+AL L L + P ++ +P IA+QCF L+++F P T
Sbjct: 405 AVAQAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQAIASQCFQLSSLFTPQT 462
>gi|440906315|gb|ELR56591.1| Putative RNA-binding protein 23 [Bos grunniens mutus]
Length = 463
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/298 (56%), Positives = 211/298 (70%), Gaps = 27/298 (9%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 171 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 230
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGP+RLY+GSLH NI
Sbjct: 231 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPVRLYVGSLHCNI 289
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGI EPFGKIDNI LM D +TGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 290 TEDMLRGILEPFGKIDNIVLMKDSETGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 349
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAA---- 241
++G VT+R + GG + E +DLG A G LQLM KLAEG+G++LP
Sbjct: 350 RIGHVTERPD--GGTDITFPDGDQE---LDLGSAAGHLQLMAKLAEGSGIQLPTTTAAAA 404
Query: 242 ---------ASALNLAQNAILNSSTPQVSSSTAP-------PIATQCFLLANMFDPAT 283
A+AL L L + P ++ +P +A+QCF L+++F P T
Sbjct: 405 AVAQAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQAVASQCFQLSSLFTPQT 462
>gi|296483628|tpg|DAA25743.1| TPA: RNA binding motif protein 23 [Bos taurus]
Length = 463
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 168/299 (56%), Positives = 211/299 (70%), Gaps = 29/299 (9%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 171 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 230
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGP+RLY+GSLH NI
Sbjct: 231 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPVRLYVGSLHCNI 289
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGI EPFGKIDNI LM D +TGRSKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 290 TEDMLRGILEPFGKIDNIVLMKDSETGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 349
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
++G VT+R + GG + E +DLG A G LQLM KLAEG+G++LP
Sbjct: 350 RIGHVTERPD--GGTDITFPDGDQE---LDLGSAGGHLQLMAKLAEGSGIQLPTTTAAAA 404
Query: 241 ----------------AASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
A L A L + +P ++ ++ IA+QCF L+++F P T
Sbjct: 405 AVAQAAAAQAAALQLNGADPLGALNPAALTALSPALNLASQ-AIASQCFQLSSLFTPQT 462
>gi|344298617|ref|XP_003420988.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Loxodonta
africana]
Length = 416
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 171/297 (57%), Positives = 211/297 (71%), Gaps = 26/297 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 125 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 184
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 185 EIQSVPLAIGLTGQWLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 243
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKID+I L D DTG SKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 244 TEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAGRPM 303
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
+VG T+R + GG + E +DLG A GRLQLM KLAEG+G++LP
Sbjct: 304 RVGHATERPD--GGTDITFPDGDRE---LDLGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 358
Query: 241 -------AASALNLAQNAILNSSTPQVSSSTAP-------PIATQCFLLANMFDPAT 283
AA+AL L L + P ++ +P +A+QC L+++F P T
Sbjct: 359 AAAAAAAAAAALQLNGAVPLGALNPAALTALSPALNLASQAVASQCLQLSSLFTPKT 415
>gi|344298613|ref|XP_003420986.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Loxodonta
africana]
Length = 434
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 171/297 (57%), Positives = 211/297 (71%), Gaps = 26/297 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 143 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 202
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 203 EIQSVPLAIGLTGQWLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 261
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKID+I L D DTG SKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 262 TEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAGRPM 321
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
+VG T+R + GG + E +DLG A GRLQLM KLAEG+G++LP
Sbjct: 322 RVGHATERPD--GGTDITFPDGDRE---LDLGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 376
Query: 241 -------AASALNLAQNAILNSSTPQVSSSTAP-------PIATQCFLLANMFDPAT 283
AA+AL L L + P ++ +P +A+QC L+++F P T
Sbjct: 377 AAAAAAAAAAALQLNGAVPLGALNPAALTALSPALNLASQAVASQCLQLSSLFTPKT 433
>gi|344298615|ref|XP_003420987.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Loxodonta
africana]
Length = 450
Score = 310 bits (795), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 171/297 (57%), Positives = 211/297 (71%), Gaps = 26/297 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 159 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 218
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 219 EIQSVPLAIGLTGQWLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 277
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKID+I L D DTG SKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 278 TEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFITFSDSECARRALEQLNGFELAGRPM 337
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----- 240
+VG T+R + GG + E +DLG A GRLQLM KLAEG+G++LP
Sbjct: 338 RVGHATERPD--GGTDITFPDGDRE---LDLGSAGGRLQLMAKLAEGSGIQLPTTAAAAA 392
Query: 241 -------AASALNLAQNAILNSSTPQVSSSTAP-------PIATQCFLLANMFDPAT 283
AA+AL L L + P ++ +P +A+QC L+++F P T
Sbjct: 393 AAAAAAAAAAALQLNGAVPLGALNPAALTALSPALNLASQAVASQCLQLSSLFTPKT 449
>gi|442761059|gb|JAA72688.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Ixodes ricinus]
Length = 235
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 151/201 (75%), Positives = 169/201 (84%), Gaps = 6/201 (2%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
DD++PEERD RT+FCMQLSQRIR RDLEEFFS+VGKVRDVRLI NKTRR KGIAY+EF+
Sbjct: 33 DDITPEERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEFQ 92
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNR-----AGNTLPNLQPRGTGGPMRLYIGS 121
D ESVPLAMGLNGQKL GIPI+VQPTQAE+NR A + LQ RG GPMRLY+GS
Sbjct: 93 DVESVPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQSASTSSSTLQ-RGNIGPMRLYVGS 151
Query: 122 LHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFEL 181
LHFNITEDML+GIFEPFGKID I+L+ D +T RSKGYGFITFH ++DAKKA EQLNGFEL
Sbjct: 152 LHFNITEDMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNGFEL 211
Query: 182 AGRPMKVGTVTDRNESVGGGP 202
AGRPMKVG VT+R + V P
Sbjct: 212 AGRPMKVGHVTERTDVVPKAP 232
>gi|33150650|gb|AAP97203.1|AF087905_1 splicing factor SF2 [Homo sapiens]
Length = 425
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 206/291 (70%), Gaps = 20/291 (6%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 140 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 199
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 200 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 258
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN-GFELAGRP 185
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A++A + G L GRP
Sbjct: 259 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRACGTVEWGLSLLGRP 318
Query: 186 MKVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA---- 240
M+VG VT+R + GG + E +DLG A GR QLM KLAEG G++LP
Sbjct: 319 MRVGHVTERLD--GGTDITFPDGDQE---LDLGSAGGRFQLMAKLAEGAGIQLPSTAAAA 373
Query: 241 ------AASALNLAQNAILNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A+AL L L + P ++ +P +A+QCF L+++F P T
Sbjct: 374 AAAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 424
>gi|226469234|emb|CAX70096.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 327
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/259 (59%), Positives = 199/259 (76%), Gaps = 10/259 (3%)
Query: 52 NKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGT 111
NKT+R KGIAY+EF++ ES LA+GL G +LLG+PI +Q + AEKNR T P+L PR +
Sbjct: 3 NKTKRSKGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSAT-PSL-PRPS 60
Query: 112 ---GGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADD 168
GPM+LYIGSLH+NITE+ML+GIFEPFGKI++I+L+ DP T RS+GYGF+T+ ++DD
Sbjct: 61 QQNKGPMKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFVTYVNSDD 120
Query: 169 AKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFK 228
AKKA +QLNGFELAGRPMKV VT+R+E S LD DE +R+GVDLG TGRL LM K
Sbjct: 121 AKKALDQLNGFELAGRPMKVNHVTERSEY--ACLSALDNDEADRSGVDLGTTGRLALMAK 178
Query: 229 LAEGTGLELPPAAASALNLAQN--AILNSSTPQVSSSTAPPIATQCFLLANMFDPATETN 286
LAEGTGLE+P AA + L++ QN + ++ + SS+ APP+ TQCF+L+NMFDP T+
Sbjct: 179 LAEGTGLEIPKAALAQLHIGQNNPILGSAGSVSSSSAIAPPVCTQCFMLSNMFDPHVATH 238
Query: 287 PTWDVEIRDDVIEECNKHG 305
++ EIRDDVIEEC K G
Sbjct: 239 SVFE-EIRDDVIEECTKAG 256
>gi|256082942|ref|XP_002577710.1| splicing factor [Schistosoma mansoni]
gi|360043601|emb|CCD81147.1| putative splicing factor [Schistosoma mansoni]
Length = 327
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/259 (59%), Positives = 199/259 (76%), Gaps = 10/259 (3%)
Query: 52 NKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGT 111
NKT+R KGIAY+EF++ ES LA+GL G +LLG+PI +Q + AEKNR T P+L PR +
Sbjct: 3 NKTKRSKGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSAT-PSL-PRPS 60
Query: 112 G---GPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADD 168
GPM+LYIGSLH+NITE+ML+GIFEPFGKI++I+L+ DP T RS+GYGF+T+ ++DD
Sbjct: 61 QQNRGPMKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPTTNRSQGYGFVTYVNSDD 120
Query: 169 AKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFK 228
AKKA +QLNGFELAGRPMKV VT+R+E S LD DE +R+GVDLG TGRL LM K
Sbjct: 121 AKKALDQLNGFELAGRPMKVNHVTERSEY--ACLSALDNDEADRSGVDLGTTGRLALMAK 178
Query: 229 LAEGTGLELPPAAASALNLAQN--AILNSSTPQVSSSTAPPIATQCFLLANMFDPATETN 286
LAEGTGLE+P AA + L++ QN + ++ + SS+ APP+ TQCF+L+NMFDP T+
Sbjct: 179 LAEGTGLEIPKAALAQLHIGQNNPILGSAGSVSSSSAIAPPVCTQCFMLSNMFDPHVATH 238
Query: 287 PTWDVEIRDDVIEECNKHG 305
++ EIRDDVIEEC K G
Sbjct: 239 SVFE-EIRDDVIEECTKAG 256
>gi|24582417|ref|NP_723245.1| CG11266, isoform C [Drosophila melanogaster]
gi|24582419|ref|NP_723246.1| CG11266, isoform D [Drosophila melanogaster]
gi|24582421|ref|NP_723247.1| CG11266, isoform F [Drosophila melanogaster]
gi|24582423|ref|NP_723248.1| CG11266, isoform G [Drosophila melanogaster]
gi|45550943|ref|NP_723244.2| CG11266, isoform E [Drosophila melanogaster]
gi|22945836|gb|AAN10616.1| CG11266, isoform C [Drosophila melanogaster]
gi|22945837|gb|AAN10617.1| CG11266, isoform D [Drosophila melanogaster]
gi|22945838|gb|AAN10618.1| CG11266, isoform F [Drosophila melanogaster]
gi|22945839|gb|AAN10619.1| CG11266, isoform G [Drosophila melanogaster]
gi|45445036|gb|AAN10615.2| CG11266, isoform E [Drosophila melanogaster]
Length = 287
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/218 (69%), Positives = 171/218 (78%), Gaps = 7/218 (3%)
Query: 88 IVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLM 147
+VQ TQAEKNR N P QP+ GPMRLY+GSLHFNITEDMLRGIFEPFGKID IQL+
Sbjct: 1 MVQHTQAEKNRLQNAAPAFQPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLI 60
Query: 148 VDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDT 207
+D +TGRSKGYGFIT+H+ADDAKKA EQLNGFELAGR MKVG VT+R + ++LDT
Sbjct: 61 MDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLMKVGNVTER---LDMNTTSLDT 117
Query: 208 DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPP 267
DEM+R G+DLGATGRLQLMFKLAEG GL +P AAA+AL P AP
Sbjct: 118 DEMDRTGIDLGATGRLQLMFKLAEGAGLAVPQAAANALLATA----PQPAPLQQQEVAPS 173
Query: 268 IATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
IATQCF+L+NMFDP TETNPTWDVEIRDDV+EEC KHG
Sbjct: 174 IATQCFILSNMFDPRTETNPTWDVEIRDDVLEECAKHG 211
>gi|351697087|gb|EHB00006.1| Putative RNA-binding protein 23 [Heterocephalus glaber]
Length = 436
Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 209/293 (71%), Gaps = 29/293 (9%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS++GKV DVR+I+ +RR KGIAY+EF
Sbjct: 156 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAIGKVHDVRIISDRNSRRSKGIAYVEFC 215
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D +SVPLA+GL GQ+LLG+PI+VQ +QAEKNR NLQ +G+GGP RLY+G LHFNI
Sbjct: 216 DIQSVPLAIGLTGQRLLGVPIVVQASQAEKNRLAAMANNLQ-KGSGGPKRLYVGCLHFNI 274
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKI+NI LM D +TG SKGYGFITF ++ A++A EQLNGFELAGRPM
Sbjct: 275 TEDMLRGIFEPFGKIENIVLMKDSETGHSKGYGFITFSESECARRAVEQLNGFELAGRPM 334
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAA--- 242
+VG +T+R + G + D D++ VDLG A G LQLM A+G+G+ LP AA
Sbjct: 335 RVGHLTERADG-GTDITFPDGDQV----VDLGSAGGHLQLM---AKGSGIHLPITAAAAQ 386
Query: 243 ------------SALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
SALN A L + +P + T+ +A+QCF ++F P T
Sbjct: 387 AAALQLNGVVPLSALN---PAALTALSPAL-KLTSQAVASQCFQHPSLFTPQT 435
>gi|221111756|ref|XP_002159647.1| PREDICTED: RNA-binding protein 39-like [Hydra magnipapillata]
Length = 528
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 151/301 (50%), Positives = 209/301 (69%), Gaps = 22/301 (7%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
+S EERD+RT+F MQL++++ RD+++FFS VG+VRDVRLI+ +RR KGI Y+EF D
Sbjct: 176 VSQEERDSRTVFIMQLAKQVTIRDIQDFFSKVGQVRDVRLISDRNSRRSKGIGYVEFTDA 235
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNR-AGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
+V LA+ L+GQKLLG+PI+V PT AEKNR A ++P+G PM+LY+GSLH+NIT
Sbjct: 236 SAVTLAIKLSGQKLLGVPIMVSPTMAEKNRYAAAQAALVKPQG---PMKLYVGSLHYNIT 292
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E MLR IFEPFG ++++QL D +T RSKG+GF+ F A AK+A EQ+NGFELAGRPMK
Sbjct: 293 EPMLRAIFEPFGTVESVQLQYDSETNRSKGFGFVNFREAGAAKRAMEQMNGFELAGRPMK 352
Query: 188 VGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAE--GTGLELPPAAASAL 245
V TV++R + G S LD +E E+ G+++ A R LM KLA+ G+GL++P A
Sbjct: 353 VNTVSERTD---GSMSFLDDEETEKGGIEMNAQSRASLMQKLAQTHGSGLQVPTAPIIP- 408
Query: 246 NLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
A+L + V+ ST C +L+N+FDP ET W+++IR+DV+EE K G
Sbjct: 409 -----AMLPTPMMNVAGST-------CLILSNLFDPRKETESDWELDIRNDVLEEVTKMG 456
Query: 306 V 306
+
Sbjct: 457 I 457
>gi|119586631|gb|EAW66227.1| RNA binding motif protein 23, isoform CRA_f [Homo sapiens]
Length = 269
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/274 (59%), Positives = 198/274 (72%), Gaps = 18/274 (6%)
Query: 22 MQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQK 81
MQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF + +SVPLA+GL GQ+
Sbjct: 1 MQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQR 60
Query: 82 LLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKI 141
LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNITEDMLRGIFEPFGKI
Sbjct: 61 LLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKI 119
Query: 142 DNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGG 201
DNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM+VG VT+R + GG
Sbjct: 120 DNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHVTERLD--GGT 177
Query: 202 PSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPAAASALNLAQNAI-------- 252
+ E +DLG A GR QLM KLAEG G++LP AA+A A A
Sbjct: 178 DITFPDGDQE---LDLGSAGGRFQLMAKLAEGAGIQLPSTAAAAAAAAAQAAALQLNGAV 234
Query: 253 -LNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
L + P ++ +P +A+QCF L+++F P T
Sbjct: 235 PLGALNPAALTALSPALNLASQCFQLSSLFTPQT 268
>gi|221044666|dbj|BAH14010.1| unnamed protein product [Homo sapiens]
Length = 270
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/275 (58%), Positives = 196/275 (71%), Gaps = 19/275 (6%)
Query: 22 MQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQK 81
MQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF + +SVPLA+GL GQ+
Sbjct: 1 MQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQR 60
Query: 82 LLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKI 141
LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNITEDMLRGIFEPFGKI
Sbjct: 61 LLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKI 119
Query: 142 DNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGG 201
DNI LM D DTGRSKGYGFITF ++ A++A EQLNGFELAGRPM+VG VT+R + GG
Sbjct: 120 DNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHVTERLD--GGT 177
Query: 202 PSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLELPPA----------AASALNLAQN 250
+ E +DLG A GR QLM KLAEG G++LP A+AL L
Sbjct: 178 DITFPDGDQE---LDLGSAGGRFQLMAKLAEGAGIQLPSTAAAAAAAAAAQAAALQLNGA 234
Query: 251 AILNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
L + P ++ +P +A+QC L+++F P T
Sbjct: 235 VPLGALNPAALTALSPALNLASQCLQLSSLFTPQT 269
>gi|332249061|ref|XP_003273679.1| PREDICTED: RNA-binding protein 39 [Nomascus leucogenys]
Length = 432
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 143/234 (61%), Positives = 172/234 (73%), Gaps = 17/234 (7%)
Query: 86 PIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQ 145
P + AEKNRA NLQ +G+ GPMRLY+GSLHFNITEDMLRGIFEPFG+I++IQ
Sbjct: 130 PFRKDKSPAEKNRAAAMANNLQ-KGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQ 188
Query: 146 LMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNL 205
LM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPMKVG VT+R ++ S L
Sbjct: 189 LMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDA-SSASSFL 247
Query: 206 DTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL----NLAQNAILNSSTPQVS 261
D+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL +LA A+ + T ++S
Sbjct: 248 DSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQT-RLS 306
Query: 262 SST----------APPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
T P+ATQCF L+NMF+P TE WD EI+DDVIEECNKHG
Sbjct: 307 QQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHG 360
>gi|195155759|ref|XP_002018768.1| GL25979 [Drosophila persimilis]
gi|194114921|gb|EDW36964.1| GL25979 [Drosophila persimilis]
Length = 289
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/219 (65%), Positives = 165/219 (75%), Gaps = 8/219 (3%)
Query: 88 IVQPTQAEKNRAGNTLP-NLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQL 146
+VQ TQAEK QP+ GPMRLY+GSLHF+ITE+MLRGIFEPFGKID IQL
Sbjct: 1 MVQHTQAEKESPYRMQRLAFQPKSHVGPMRLYVGSLHFDITEEMLRGIFEPFGKIDAIQL 60
Query: 147 MVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLD 206
++D +T RSKGYGFIT+H+A+DAKKA EQLNGFELAGRPMKVG VT+R + ++LD
Sbjct: 61 IMDTETNRSKGYGFITYHNAEDAKKALEQLNGFELAGRPMKVGNVTER---LDMNTTSLD 117
Query: 207 TDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAP 266
TDEM+R G+DLGATGRLQLMFKLAEG GL +P AAA+AL P
Sbjct: 118 TDEMDRTGIDLGATGRLQLMFKLAEGAGLAVPQAAANALLATAPQPAPVQ----QQQATP 173
Query: 267 PIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
IATQCF+L+NMFDP TETNPTWDVEIRDDV+EEC KHG
Sbjct: 174 SIATQCFILSNMFDPRTETNPTWDVEIRDDVLEECAKHG 212
>gi|195996811|ref|XP_002108274.1| hypothetical protein TRIADDRAFT_37071 [Trichoplax adhaerens]
gi|190589050|gb|EDV29072.1| hypothetical protein TRIADDRAFT_37071 [Trichoplax adhaerens]
Length = 351
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 187/286 (65%), Gaps = 9/286 (3%)
Query: 22 MQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQK 81
MQL+ R R LEE FS VG++RD+R+I +RR KGIAY+EF+ +SV A+ LNG K
Sbjct: 1 MQLAGRTGRRQLEELFSPVGEMRDIRVIADRNSRRSKGIAYVEFRLVDSVDKALKLNGTK 60
Query: 82 LLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKI 141
+ GIPI++Q TQ+EKN+ + GP RLYIGSLH+NI EDMLR IFEPFG +
Sbjct: 61 VEGIPIMIQRTQSEKNKIAALQAQQK--AQQGPTRLYIGSLHYNINEDMLRAIFEPFGLV 118
Query: 142 DNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGG 201
+N+ ++ D DT SKGYGFI + D A++A EQLNG E+AGRP+KVGTVTDR+ +
Sbjct: 119 ENVNIIRDSDTNVSKGYGFIQYKEPDSARRALEQLNGLEVAGRPIKVGTVTDRSADL-SA 177
Query: 202 PSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSS--TPQ 259
S LD D+ ER G+++ + R+ LM KL++ P + L ++ P
Sbjct: 178 MSALDDDDTERGGIEMNSLSRVALMAKLSQTHNATTVPVSVPVPVPVPGPTLPATGLIPA 237
Query: 260 VSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
++ A P CFL++NMFDPA ET+ WD++IRDD+IEECNKHG
Sbjct: 238 ANTVQASP----CFLISNMFDPAKETDQDWDLDIRDDIIEECNKHG 279
>gi|308473560|ref|XP_003099004.1| hypothetical protein CRE_26746 [Caenorhabditis remanei]
gi|308267807|gb|EFP11760.1| hypothetical protein CRE_26746 [Caenorhabditis remanei]
Length = 651
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 200/312 (64%), Gaps = 28/312 (8%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+LSPEERD RT+ MQ+++ R RDLEEFFSSVG VRDVR+IT ++T R KGI Y+EF D
Sbjct: 232 ELSPEERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRDVRIITDSRTGRSKGICYVEFWD 291
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGN-----TLPNLQPRGTGGPMRLYIGSL 122
ESVPL + LNGQ+L+G P+ +Q T AE+NRA N TL + P GP + + +L
Sbjct: 292 EESVPLGLALNGQRLMGAPLQIQRTCAERNRAANSSMASTLGFVAPGAAKGPAHVLVENL 351
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
H ITE+M+R IFE FG+I+ ++ M G ++ I F +AD+A+K+ EQLN FELA
Sbjct: 352 HPKITENMIREIFESFGRIEKLE-MEKLSNGDNRETAVIVFRNADEAQKSIEQLNNFELA 410
Query: 183 GRPMKVGTVTD-------RNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGT-- 233
GR +++ D + E +LD D +R G LGA GR QLM KLA+GT
Sbjct: 411 GRQIRLSIKQDAPPPPQIKKEEASIHQRSLD-DVGDRQGFSLGAGGRQQLMAKLAQGTGS 469
Query: 234 GLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEI 293
G+EL ASA AQ+A +S P IATQCFLL+NMFDP+ ET P WD +I
Sbjct: 470 GMEL---TASAQMAAQHA---------GNSQIPSIATQCFLLSNMFDPSKETEPAWDHDI 517
Query: 294 RDDVIEECNKHG 305
R+DVIE+C +HG
Sbjct: 518 REDVIEQCAQHG 529
>gi|25148310|ref|NP_741301.1| Protein Y55F3AM.3, isoform c [Caenorhabditis elegans]
gi|373220574|emb|CCD74061.1| Protein Y55F3AM.3, isoform c [Caenorhabditis elegans]
Length = 435
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 154/311 (49%), Positives = 200/311 (64%), Gaps = 28/311 (9%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+L+ EERD RT+ MQ+++ R RDLEEFFS+VG VRDVR+IT ++T R KGI Y+EF D
Sbjct: 16 ELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWD 75
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGN-----TLPNLQPRGTGGPMRLYIGSL 122
ESVPL + LNGQ+L+G P+ +Q T AE+NRA N TL + P G GP + + +L
Sbjct: 76 EESVPLGLALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAP-GNKGPTHVLVENL 134
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
H I E M+R IFE FG+I+ I L VD + ++G+ ITF +ADDA+K+ EQLN FELA
Sbjct: 135 HPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNADDAQKSCEQLNNFELA 193
Query: 183 GRPMKVGTVTD------RNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGT--G 234
GR +++ + + E +LD D +R G LGA GR QLM KLA+GT G
Sbjct: 194 GRCIRLSIKQESQAPAVKKEEASIHQRSLD-DVGDRQGFSLGAGGRQQLMAKLAQGTGSG 252
Query: 235 LELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIR 294
+EL ASA AQ+A S P IATQCFLL+NMFDP+ ET P WD +IR
Sbjct: 253 MEL---TASAQMAAQHA---------GHSQIPSIATQCFLLSNMFDPSKETEPAWDHDIR 300
Query: 295 DDVIEECNKHG 305
+DVIE+C HG
Sbjct: 301 EDVIEQCLAHG 311
>gi|17543644|ref|NP_500025.1| Protein Y55F3AM.3, isoform a [Caenorhabditis elegans]
gi|373220572|emb|CCD74059.1| Protein Y55F3AM.3, isoform a [Caenorhabditis elegans]
Length = 580
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 154/311 (49%), Positives = 200/311 (64%), Gaps = 28/311 (9%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+L+ EERD RT+ MQ+++ R RDLEEFFS+VG VRDVR+IT ++T R KGI Y+EF D
Sbjct: 161 ELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWD 220
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGN-----TLPNLQPRGTGGPMRLYIGSL 122
ESVPL + LNGQ+L+G P+ +Q T AE+NRA N TL + P G GP + + +L
Sbjct: 221 EESVPLGLALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAP-GNKGPTHVLVENL 279
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
H I E M+R IFE FG+I+ I L VD + ++G+ ITF +ADDA+K+ EQLN FELA
Sbjct: 280 HPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNADDAQKSCEQLNNFELA 338
Query: 183 GRPMKVGTVTD------RNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGT--G 234
GR +++ + + E +LD D +R G LGA GR QLM KLA+GT G
Sbjct: 339 GRCIRLSIKQESQAPAVKKEEASIHQRSLD-DVGDRQGFSLGAGGRQQLMAKLAQGTGSG 397
Query: 235 LELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIR 294
+EL ASA AQ+A S P IATQCFLL+NMFDP+ ET P WD +IR
Sbjct: 398 MEL---TASAQMAAQHA---------GHSQIPSIATQCFLLSNMFDPSKETEPAWDHDIR 445
Query: 295 DDVIEECNKHG 305
+DVIE+C HG
Sbjct: 446 EDVIEQCLAHG 456
>gi|341877935|gb|EGT33870.1| hypothetical protein CAEBREN_20987 [Caenorhabditis brenneri]
Length = 528
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 150/310 (48%), Positives = 202/310 (65%), Gaps = 26/310 (8%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+LS EERD RT+ MQ+++ R RDLEEFFSSVG VRDVR+IT ++T R KGI Y+EF D
Sbjct: 111 ELSAEERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRDVRIITDSRTGRSKGICYVEFWD 170
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGN-----TLPNLQPRGTGGPMRLYIGSL 122
ESVPL + LNGQ+L+G P+ +Q T AE+NRA N TL + P GP + + +L
Sbjct: 171 EESVPLGLALNGQRLMGAPLQIQRTCAERNRAANSSMASTLGFVAPGAAKGPAHVVVENL 230
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
H I ML+GIF+ FG+I+ +++ + G ++G+ I+F ++++A+KA EQLN FELA
Sbjct: 231 HPKIDAKMLQGIFDAFGRIEKLEMETE-HNGDNRGFAVISFKNSEEAQKACEQLNNFELA 289
Query: 183 GRPMKVGTVTD-----RNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGT--GL 235
GR +++ D + E +LD D +R G LGA GR QLM KLA+GT G+
Sbjct: 290 GRNIRLSIKQDAVPQHKKEEASIHQRSLD-DIGDRQGFSLGAGGRQQLMAKLAQGTGSGM 348
Query: 236 ELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRD 295
EL ASA AQ+A +S P IATQCFLL+NMFDP+ ET P WDV+IR+
Sbjct: 349 EL---TASAQMAAQHA---------GNSQIPSIATQCFLLSNMFDPSKETEPNWDVDIRE 396
Query: 296 DVIEECNKHG 305
DVIE+C +HG
Sbjct: 397 DVIEQCLQHG 406
>gi|443695245|gb|ELT96187.1| hypothetical protein CAPTEDRAFT_148377 [Capitella teleta]
Length = 277
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 137/199 (68%), Positives = 165/199 (82%), Gaps = 12/199 (6%)
Query: 115 MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQE 174
MRLY+GSLHFNITE+MLRGIF+PFGKID+I+LM + +TGRS+GYGFITFH+A+DAKKA E
Sbjct: 1 MRLYVGSLHFNITEEMLRGIFDPFGKIDDIKLMKNHETGRSQGYGFITFHTAEDAKKALE 60
Query: 175 QLNGFELAGRPMKVGTVTDR-NESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGT 233
QLNGFELAGRPMKVG VT+R E+ GPS LDTD+M+RAG+DLGATGRLQLM KLAEGT
Sbjct: 61 QLNGFELAGRPMKVGHVTERLGETT--GPSALDTDDMDRAGIDLGATGRLQLMAKLAEGT 118
Query: 234 GLELPPAAASALNLAQNAILNS-------STPQVSSSTAPPIATQCFLLANMFDPATETN 286
G E+P AA+ALN+ N I +S + +++APPIATQCF+L+NMFDP TE
Sbjct: 119 GFEIPQVAANALNM--NGIPHSIQVESAAACAAAIAASAPPIATQCFMLSNMFDPITEAT 176
Query: 287 PTWDVEIRDDVIEECNKHG 305
TW++EI+DDVIEECNKHG
Sbjct: 177 TTWEIEIQDDVIEECNKHG 195
>gi|268553731|ref|XP_002634852.1| Hypothetical protein CBG13969 [Caenorhabditis briggsae]
Length = 545
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 200/312 (64%), Gaps = 29/312 (9%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+LS EERD RT+ MQ+++ R RDLEEFFSSVG VRDVR+IT ++T R KGI Y+EF D
Sbjct: 158 ELSAEERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRDVRIITDSRTGRSKGICYVEFWD 217
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGN-----TLPNLQPRGTGGPMRLYIGSL 122
ESVPL + LNGQ+L+G P+ +Q T AE+NR N TL + P G GP ++ + +L
Sbjct: 218 EESVPLGLALNGQRLMGAPLQIQRTCAERNRIANSSVASTLGFVAP-GGKGPAQVLVENL 276
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
H I + ML +F+ FG+ID + + D + G +KG+ ITF +AD+A+KA EQLN FE+A
Sbjct: 277 HPKIDDKMLGEVFDSFGRIDKLDVEKDMN-GENKGFAVITFRNADEAQKACEQLNDFEVA 335
Query: 183 GRPMKVGTVTD-------RNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGT-- 233
GR M++ + + E +LD D +R G LGA GR QLM KLA+GT
Sbjct: 336 GRKMRLTIKQEPTPQQSIKKEEASIHQRSLD-DVGDRQGFSLGAGGRQQLMAKLAQGTGS 394
Query: 234 GLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEI 293
G+EL ASA AQ+A +S P IATQCFLL+NMFDPA ET P WD +I
Sbjct: 395 GMEL---TASAQMAAQHA---------GNSQIPSIATQCFLLSNMFDPAKETEPQWDHDI 442
Query: 294 RDDVIEECNKHG 305
R+DVIE+C HG
Sbjct: 443 REDVIEQCACHG 454
>gi|340370502|ref|XP_003383785.1| PREDICTED: RNA-binding protein 39-like [Amphimedon queenslandica]
Length = 497
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 143/312 (45%), Positives = 190/312 (60%), Gaps = 37/312 (11%)
Query: 6 SDDLSPE--ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
S DL P +RD RTI CMQLS ++ RDLE+FF G VRDV +I ++RR KGIAY+
Sbjct: 141 SPDLEPPSVDRDNRTIMCMQLSAKVTNRDLEDFFMRAGVVRDVHIIADRQSRRSKGIAYV 200
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLH 123
EF++ SV A+ +GQK+ GIPI++QPT AEKNR NL + GP +LY+GSLH
Sbjct: 201 EFQEESSVFTALSFSGQKVHGIPIMIQPTMAEKNRLAAAAENL--KKAEGPKKLYVGSLH 258
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+NITEDML+GIF PFG ++ + +M D T S+GY F+ F +D A++A LNGFELAG
Sbjct: 259 YNITEDMLQGIFSPFGNVERVSIMRDTATNVSRGYAFVEFRDSDSAERAMANLNGFELAG 318
Query: 184 RPMKV--GTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEG-------TG 234
RPMKV GTV ++ +LD ++M+ GV + R+ LM KLA G G
Sbjct: 319 RPMKVNYGTVDTSLVNI----DSLDGEDMD-VGVGMTPQSRVALMHKLAAGHNADMSIPG 373
Query: 235 LELPPAAASALNLAQNAILNSSTPQVSSSTAPP-IATQCFLLANMFDPATETNPTWDVEI 293
+++PP P + T P I + CF++ NMFDP+ ET WD EI
Sbjct: 374 VQVPP------------------PPFAVPTMPTCITSCCFVIGNMFDPSKETGSDWDKEI 415
Query: 294 RDDVIEECNKHG 305
R+DV+EEC K G
Sbjct: 416 REDVLEECVKFG 427
>gi|403264879|ref|XP_003924694.1| PREDICTED: probable RNA-binding protein 23 [Saimiri boliviensis
boliviensis]
Length = 394
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 145/288 (50%), Positives = 179/288 (62%), Gaps = 60/288 (20%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 155 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 214
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +GTGGPMRLY+GSLHFNI
Sbjct: 215 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGTGGPMRLYVGSLHFNI 273
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFIT
Sbjct: 274 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITV----------------------- 310
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELP-------- 238
+NLDT R G+ + K+ G+G++LP
Sbjct: 311 ----------------NNLDTYTNSRLGI---------VYTKVLLGSGIQLPTTTAAAAA 345
Query: 239 -PAAASALNLAQNAILNSSTPQVSSSTAPP--IATQCFLLANMFDPAT 283
A A+ L L L + P ++ +P +A+QCF L+++F P T
Sbjct: 346 AAAQAATLQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQT 393
>gi|441667161|ref|XP_004091953.1| PREDICTED: probable RNA-binding protein 23 [Nomascus leucogenys]
Length = 319
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 119/158 (75%), Positives = 137/158 (86%), Gaps = 1/158 (0%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 156 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 215
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G+GGPMRLY+GSLHFNI
Sbjct: 216 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNI 274
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFH 164
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFIT H
Sbjct: 275 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITLH 312
>gi|21739702|emb|CAD38887.1| hypothetical protein [Homo sapiens]
gi|119586632|gb|EAW66228.1| RNA binding motif protein 23, isoform CRA_g [Homo sapiens]
Length = 319
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/158 (75%), Positives = 136/158 (86%), Gaps = 1/158 (0%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 156 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 215
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR NLQ +G GGPMRLY+GSLHFNI
Sbjct: 216 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQ-KGNGGPMRLYVGSLHFNI 274
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFH 164
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFIT H
Sbjct: 275 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITLH 312
>gi|193785067|dbj|BAG54220.1| unnamed protein product [Homo sapiens]
Length = 319
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 117/158 (74%), Positives = 135/158 (85%), Gaps = 1/158 (0%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDV +I+ +RR KGIAY+EF
Sbjct: 156 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVCIISDRNSRRSKGIAYVEFC 215
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR +LQ +G GGPMRLY+GSLHFNI
Sbjct: 216 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANDLQ-KGNGGPMRLYVGSLHFNI 274
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFH 164
TEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFIT H
Sbjct: 275 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITLH 312
>gi|356516321|ref|XP_003526844.1| PREDICTED: uncharacterized protein LOC100802446 [Glycine max]
Length = 549
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 143/335 (42%), Positives = 192/335 (57%), Gaps = 39/335 (11%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F Q+ + RD EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 178 ERDQRTVFAYQMPLKASERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVP 237
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-----RLYIGSLHFNIT 127
+A+ L+GQ LLG P++V+P++AEKN + + G GP +LY+G+LHFN+T
Sbjct: 238 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNATS-GAAGVVGPYGAVDRKLYVGNLHFNMT 296
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPM 186
E LR IFEPFG ++ +QL +D +TG KG+GF+ F + AK AQ LNG E+AGR +
Sbjct: 297 ESQLREIFEPFGPVEIVQLPLDLETGHCKGFGFVQFAHLEHAKAAQ-SLNGKLEIAGRTI 355
Query: 187 KVGTVTDR--NESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAE---GTGLELPPAA 241
KV +VTD N+ ++ D DE G+ L A R LM KL + LP A
Sbjct: 356 KVSSVTDHVGNQDTTAKSADFDDDE---GGLSLNAQSRALLMQKLDRSGIAASIGLPIAN 412
Query: 242 ASALNLAQNAILNSSTPQVSSSTAPPIATQ---------------CFLLANMFDPATETN 286
S+ AQ AI+ P + + AP + TQ C LL NMFDP TET
Sbjct: 413 GSS--PAQQAIMPIGNPGIVPAVAPAVPTQIMPIPVTEPVGNPSECLLLKNMFDPNTETE 470
Query: 287 PTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
P +D++I++DV EEC+K+G V + F+Y
Sbjct: 471 PDFDLDIKEDVEEECSKYGRVKHIYVDKRSAGFVY 505
>gi|194704666|gb|ACF86417.1| unknown [Zea mays]
gi|414871304|tpg|DAA49861.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
Length = 537
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/337 (43%), Positives = 194/337 (57%), Gaps = 40/337 (11%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F QLS + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 164 ERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 223
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
+A+ L+GQ LLG ++V+P++AEKN + + +GG +LY+G+LH NITED LR
Sbjct: 224 MAIALSGQPLLGQAVMVKPSEAEKNLVQSNATS-GGAASGGARKLYVGNLHSNITEDQLR 282
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKVGTV 191
+FEPFG+++ +QL VDP TG KGYGFI F +DAK AQ LNG ++AGR +KV V
Sbjct: 283 QVFEPFGQVELVQLPVDPMTGLCKGYGFIQFARLEDAKAAQ-SLNGQLDIAGRVIKVSAV 341
Query: 192 TDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL---------------------- 229
TD G + D D+ E G+ L A+ R LM KL
Sbjct: 342 TDHVGMQASGATTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSLTRGIGAAGVAVPA 401
Query: 230 -----AEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATE 284
A G LPP A+ ++ +L +T V+ ST T+ LL NMFDPA E
Sbjct: 402 TSVIGAPGAASLLPPTVAAVGSVPGAPVLPVTTQNVTMST----PTEFLLLKNMFDPALE 457
Query: 285 TNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
T+P +D++IRDDV +EC+K G V +T F+Y
Sbjct: 458 TDPDFDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVY 494
>gi|302790311|ref|XP_002976923.1| hypothetical protein SELMODRAFT_151471 [Selaginella moellendorffii]
gi|302797811|ref|XP_002980666.1| hypothetical protein SELMODRAFT_178258 [Selaginella moellendorffii]
gi|300151672|gb|EFJ18317.1| hypothetical protein SELMODRAFT_178258 [Selaginella moellendorffii]
gi|300155401|gb|EFJ22033.1| hypothetical protein SELMODRAFT_151471 [Selaginella moellendorffii]
Length = 532
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/336 (41%), Positives = 193/336 (57%), Gaps = 27/336 (8%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F Q+ + + + +FFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 165 ERDQRTVFAWQICLKADEKHVYDFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVP 224
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRG-----TGGPMRLYIGSLHFNIT 127
LA+ LN Q LLG ++V+P++AEKN + +GG RLY+G+LH NIT
Sbjct: 225 LALQLNNQPLLGQNVMVKPSEAEKNLVHSASGGSAAGAFNGPYSGGARRLYVGNLHVNIT 284
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPM 186
ED LR +FEPFG I+ +QL +D +TG KGYGF+ + +DA+ AQ+ LNG ELAGR +
Sbjct: 285 EDQLRQVFEPFGVIELVQLPLDQETGLCKGYGFVQYSKLEDARAAQQGLNGILELAGRAI 344
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELP----PAAA 242
KV VTD+ G + D D+ E G+ L A R LM KL G+ P P A
Sbjct: 345 KVSAVTDQQTGQDIGTTQNDLDDDEGGGLALNARSRALLMQKLDRSGGVGAPASLQPQAP 404
Query: 243 SALNLAQNAILNSSTPQVSS-----STAPPIATQCFLLANMFDPATETNPTWDVEIRDDV 297
A+ I ++ + Q S PP ++C LL NMFDPATET+P +D++I++DV
Sbjct: 405 MAVPPVYGGIGSALSMQNGSVLPEEPIGPP--SECLLLKNMFDPATETDPEFDIDIKNDV 462
Query: 298 IEECNKHGVGASTVCFIYSVIFLKLWSYVQVNLWCR 333
+EC+K G V + + Y Q +++ R
Sbjct: 463 QDECSKFG----------PVKHISVDKYSQGHVYVR 488
>gi|384498450|gb|EIE88941.1| hypothetical protein RO3G_13652 [Rhizopus delemar RA 99-880]
Length = 454
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 183/296 (61%), Gaps = 18/296 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
E+RD RT+F QL+ R+ TR+ + FFS G+VR+ ++IT +R+ KG Y+EF D SV
Sbjct: 119 EDRDRRTVFVTQLAARLTTREFDAFFSQAGRVREAKIITDRNSRKSKGCGYVEFYDETSV 178
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM--RLYIGSLHFNITED 129
A+ L+GQKLLGIP++VQ ++AEKNR T P+ RLYIGSLHF++TE+
Sbjct: 179 QNALALSGQKLLGIPVLVQLSEAEKNRLAMAAQRNAMGVTTEPLYQRLYIGSLHFSLTEN 238
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
+R IFEPFG +D + L DP+TGRSKG+GFI + +A+DAK+A E++NGFELAGR +KVG
Sbjct: 239 DVRQIFEPFGPLDFVNLHKDPETGRSKGFGFIQYKNANDAKQALEKMNGFELAGRNLKVG 298
Query: 190 TVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQ 249
V++++ G S D+ E G+ L + R +LM KLA PP+ A
Sbjct: 299 LVSEKS---GTTMSTFGLDDEETEGLALNSLSRAELMAKLAARDPQNSPPS-----RHAP 350
Query: 250 NAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
+L + P S T+ +L NMF+P ET+P W ++ D+ EC K+G
Sbjct: 351 APVLKPNIPTAS--------TRYVMLNNMFNPNEETDPDWVSDLEADIKIECEKYG 398
>gi|452820290|gb|EME27334.1| RNA-binding protein [Galdieria sulphuraria]
Length = 596
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 136/347 (39%), Positives = 194/347 (55%), Gaps = 61/347 (17%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RTIF QL+Q++ +D+ FFS+ GKVRD+R+I ++ R KG AY+EF E++P
Sbjct: 182 ERDLRTIFVWQLAQKVTEKDVYNFFSAAGKVRDIRMIIDKRSGRHKGAAYVEFYYKEAIP 241
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKN-------------------------RAGNTLPNLQ 107
AM L GQ+L G P+ ++P++AEKN G+T PN
Sbjct: 242 SAMRLAGQQLCGYPVAIKPSEAEKNIAAEMAAREAAAAQQARLAELEEWSGGGDTSPNSN 301
Query: 108 PRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSAD 167
P +LY+GS+HF+I+ED LR IFEPFG++ ++QL DP+TGRS+G+GF+ + + +
Sbjct: 302 PLTF---TKLYVGSIHFSISEDDLRTIFEPFGEVISLQLHKDPETGRSRGFGFVQYKNHE 358
Query: 168 DAKKAQEQLNGFELAGRPMKVGTVT---DRNESVGGGPSNL------------------- 205
DAKKA EQLNG +LAGRP+KVG T + + +G PS +
Sbjct: 359 DAKKAFEQLNGLDLAGRPLKVGLATAEAQKLQVLGAIPSGVPGTIAAQSLSSKNYAYSAY 418
Query: 206 --DTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAA----SALNLAQNAILNSSTPQ 259
+ DE +G+ L AT R QLM +LA G L + A S L+ A S T
Sbjct: 419 ISELDEGGDSGMALSATQRTQLMQRLARGEALASKSSPALGGKSPGLLSSEASPQSGTVP 478
Query: 260 VSSSTAPPIA-----TQCFLLANMFDPATETNPTWDVEIRDDVIEEC 301
PP+ + C +L NMFDPA ET+P + +E+++DV +EC
Sbjct: 479 TRQGYNPPLVHSISPSTCLMLRNMFDPAQETDPNFHLEVQEDVRDEC 525
>gi|357113992|ref|XP_003558785.1| PREDICTED: RNA-binding protein 39-like [Brachypodium distachyon]
Length = 551
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 152/347 (43%), Positives = 199/347 (57%), Gaps = 42/347 (12%)
Query: 7 DDLSPE---ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
D PE ERD RT+F QLS + RD+ EFFS GKVRDVRLI +RR KG+ YI
Sbjct: 167 DGAEPEADPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYI 226
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLH 123
EF D SVP+A+ L+GQ LLG P++V+P++AEKN + +GG +LY+G+LH
Sbjct: 227 EFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLV-QSSATSSVAASGGARKLYVGNLH 285
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELA 182
NITED LR +FEPFG ++ +QL VDP TG KG+GF+ F +DAK AQ LNG ++A
Sbjct: 286 ANITEDQLRQVFEPFGLVELVQLPVDPLTGLCKGFGFVQFARLEDAKAAQ-SLNGQLDIA 344
Query: 183 GRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL------------- 229
GR +KV VTD+ G + D D+ E G+ L A+ R LM KL
Sbjct: 345 GRVIKVSAVTDQAGVQVSGATTGDLDDDEGGGLALNASSRALLMQKLDRSGVTTSLTSGM 404
Query: 230 -AEGTGLELPPAAASALNLAQNA------------ILNSSTPQVSS--STAPPIATQCFL 274
A G + A S L A I +S P +S +TAPP ++C L
Sbjct: 405 GAAGLNTSVTLPAVSVLGAPPAAPALQPTLTGLGLIPGASVPVISQPIATAPP--SECLL 462
Query: 275 LANMFDPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
L NMFDPA ET+P +D++I+DDV EEC+K G V +T F+Y
Sbjct: 463 LKNMFDPAVETDPDFDLDIKDDVREECSKFGQIRHIFVDKNTAGFVY 509
>gi|222612890|gb|EEE51022.1| hypothetical protein OsJ_31660 [Oryza sativa Japonica Group]
Length = 548
Score = 233 bits (595), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 149/349 (42%), Positives = 201/349 (57%), Gaps = 46/349 (13%)
Query: 7 DDLSPE---ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
D PE ERD RT+F QLS + RD+ EFFS GKVRDVRLI +RR KG+ YI
Sbjct: 164 DGAEPEADPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYI 223
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRG--TGGPMRLYIGS 121
EF D SVP+A+ L GQ LLG ++V+P++AEKN + N+ G +GG +LY+G+
Sbjct: 224 EFYDAMSVPMAIALTGQVLLGQQVMVKPSEAEKNLVQS---NVASGGIASGGARKLYVGN 280
Query: 122 LHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FE 180
LH NITED LR +FEPFG+++ +QL VDP TG KG+GFI F +DAK AQ LNG +
Sbjct: 281 LHSNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGFIQFARLEDAKAAQ-SLNGQLD 339
Query: 181 LAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEG-------- 232
+AGR +KV VT++ GG + D D+ E G+ L A+ R LM KL
Sbjct: 340 IAGRVIKVSAVTEQAGLQVGGATTGDLDDDEGGGLALNASSRAMLMRKLDRSGTATSITG 399
Query: 233 --------TGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIA------------TQC 272
T +ELP A+ + L +++ + P + T P I T+
Sbjct: 400 GIGIPGVNTSVELPSASVTGAPLPTTSLIQPTIPAI--GTVPGIQIPGTQSADIGSPTEF 457
Query: 273 FLLANMFDPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
LL NMFDPA ET+P +D++I+DDV +EC+K G V +T F+Y
Sbjct: 458 LLLKNMFDPAVETDPDFDLDIKDDVQDECSKFGAVNHIFVDKNTAGFVY 506
>gi|414871305|tpg|DAA49862.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
Length = 487
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 143/322 (44%), Positives = 188/322 (58%), Gaps = 34/322 (10%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F QLS + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 164 ERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 223
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
+A+ L+GQ LLG ++V+P++AEKN + + +GG +LY+G+LH NITED LR
Sbjct: 224 MAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGA-ASGGARKLYVGNLHSNITEDQLR 282
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKVGTV 191
+FEPFG+++ +QL VDP TG KGYGFI F +DAK AQ LNG ++AGR +KV V
Sbjct: 283 QVFEPFGQVELVQLPVDPMTGLCKGYGFIQFARLEDAKAAQ-SLNGQLDIAGRVIKVSAV 341
Query: 192 TDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL---------------------- 229
TD G + D D+ E G+ L A+ R LM KL
Sbjct: 342 TDHVGMQASGATTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSLTRGIGAAGVAVPA 401
Query: 230 -----AEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATE 284
A G LPP A+ ++ +L +T V+ ST T+ LL NMFDPA E
Sbjct: 402 TSVIGAPGAASLLPPTVAAVGSVPGAPVLPVTTQNVTMST----PTEFLLLKNMFDPALE 457
Query: 285 TNPTWDVEIRDDVIEECNKHGV 306
T+P +D++IRDDV +EC+K G
Sbjct: 458 TDPDFDLDIRDDVQDECSKFGA 479
>gi|242039571|ref|XP_002467180.1| hypothetical protein SORBIDRAFT_01g021020 [Sorghum bicolor]
gi|241921034|gb|EER94178.1| hypothetical protein SORBIDRAFT_01g021020 [Sorghum bicolor]
Length = 535
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 153/352 (43%), Positives = 200/352 (56%), Gaps = 43/352 (12%)
Query: 1 MRPAYSDDLSPE---ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRF 57
+R D PE ERD RT+F QLS + RD+ EFFS GKVRDVRLI +RR
Sbjct: 147 VRRRKDDGAEPEVDPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRS 206
Query: 58 KGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
KG+ YIEF D SVP+A+ L+GQ LLG ++V+P++AEKN + + +GG +L
Sbjct: 207 KGVGYIEFYDVMSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATS-GGAASGGARKL 265
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
Y+G+LH NITED LR +FEPFG+++ +QL +DP TG KGYGFI F +DAK AQ LN
Sbjct: 266 YVGNLHSNITEDQLRQVFEPFGQVELVQLPLDPMTGLCKGYGFIQFARLEDAKAAQ-SLN 324
Query: 178 G-FELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAE----- 231
G ++AGR +KV VTD G + D D+ E G+ L A+ R LM KL
Sbjct: 325 GQLDIAGRVIKVSAVTDHVGVQASGATTGDLDDDEGGGLALNASSRAALMLKLDRSGTAT 384
Query: 232 -------GTGLELP-------PAAASALNLAQNA--------ILNSSTPQVSSSTAPPIA 269
G+ LP P AAS L+ A +L +T V ST
Sbjct: 385 SLTGGIGAAGVSLPATSVIGAPGAASLLSPTVAAVGSVPGAPVLPVTTQNVIMST----P 440
Query: 270 TQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
T+ LL NMFDPA ET+P +D++IRDDV +EC+K G V +T F+Y
Sbjct: 441 TEFLLLKNMFDPALETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVY 492
>gi|9758966|dbj|BAB09409.1| splicing factor-like protein [Arabidopsis thaliana]
Length = 604
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/328 (43%), Positives = 195/328 (59%), Gaps = 31/328 (9%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 164 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 223
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM--RLYIGSLHFNITEDM 130
+A+ L+GQ LG P++V+P++AEKN A + N G GP +LY+G+LHFN++E
Sbjct: 224 MAIALSGQLFLGQPVMVKPSEAEKNLAQS---NSTTVGGTGPADRKLYVGNLHFNMSELQ 280
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKVG 189
LR IFE FG ++ +QL +DP+TG+ KG+GFI F + +K AQ LNG E+AGR +KV
Sbjct: 281 LRQIFEAFGPVELVQLPLDPETGQCKGFGFIQFVQLEHSKAAQIALNGKLEIAGRTIKVS 340
Query: 190 TVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEG-------TGLELPPAAA 242
+V+D + P + D D+ + G+ L A R LM KL L +P
Sbjct: 341 SVSDHIGTQDSAPKSADFDDDDGGGLALNAQSRAMLMQKLDRSGIATSIVGSLGVPGLNG 400
Query: 243 SALNLAQNAILNSSTP-QVSSSTAPP--------IATQCFLLANMFDPATETNPTWDVEI 293
+A N +N S P V +TA P + ++C LL NMFDPATET P +D+EI
Sbjct: 401 AAFN---QPGMNPSFPTSVLPTTAIPSFVNEHVGLPSECLLLKNMFDPATETEPNFDLEI 457
Query: 294 RDDVIEECNKHG------VGASTVCFIY 315
RDDV +EC+K+G V ++ F+Y
Sbjct: 458 RDDVADECSKYGPVNHIYVDKNSAGFVY 485
>gi|227206234|dbj|BAH57172.1| AT5G09880 [Arabidopsis thaliana]
Length = 505
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/328 (43%), Positives = 195/328 (59%), Gaps = 31/328 (9%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 142 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 201
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM--RLYIGSLHFNITEDM 130
+A+ L+GQ LG P++V+P++AEKN A + N G GP +LY+G+LHFN++E
Sbjct: 202 MAIALSGQLFLGQPVMVKPSEAEKNLAQS---NSTTVGGTGPADRKLYVGNLHFNMSELQ 258
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKVG 189
LR IFE FG ++ +QL +DP+TG+ KG+GFI F + +K AQ LNG E+AGR +KV
Sbjct: 259 LRQIFEAFGPVELVQLPLDPETGQCKGFGFIQFVQLEHSKAAQIALNGKLEIAGRTIKVS 318
Query: 190 TVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEG-------TGLELPPAAA 242
+V+D + P + D D+ + G+ L A R LM KL L +P
Sbjct: 319 SVSDHIGTQDSAPKSADFDDDDGGGLALNAQSRAMLMQKLDRSGIATSIVGSLGVPGLNG 378
Query: 243 SALNLAQNAILNSSTP-QVSSSTAPP--------IATQCFLLANMFDPATETNPTWDVEI 293
+A N +N S P V +TA P + ++C LL NMFDPATET P +D+EI
Sbjct: 379 AAFN---QPGMNPSFPTSVLPTTAIPSFVNEHVGLPSECLLLKNMFDPATETEPNFDLEI 435
Query: 294 RDDVIEECNKHG------VGASTVCFIY 315
RDDV +EC+K+G V ++ F+Y
Sbjct: 436 RDDVADECSKYGPVNHIYVDKNSAGFVY 463
>gi|326504734|dbj|BAK06658.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 152/343 (44%), Positives = 196/343 (57%), Gaps = 37/343 (10%)
Query: 7 DDLSPE---ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
D PE ERD RT+F QLS + RD+ EFFS GKVRDVRLI +RR KG+ YI
Sbjct: 206 DGTEPEVDPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYI 265
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLH 123
EF D SVP+A+ L GQ LLG ++V+P++AEKN A + + +GG +LY+G+LH
Sbjct: 266 EFYDVMSVPMAIALTGQPLLGQAVMVKPSEAEKNLAQSNATSGGA-ASGGARKLYVGNLH 324
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELA 182
NITED LR +FEPFG+++ +QL VDP TG KG+GFI F +DAK AQ LNG ++A
Sbjct: 325 SNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGFIQFARLEDAKAAQ-SLNGQLDIA 383
Query: 183 GRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL-AEGTGLEL---- 237
GR +KV VTD+ V G + D D+ E G+ L A+ R LM KL GT L
Sbjct: 384 GRVIKVSAVTDQG-GVQLGTTTGDLDDDEGGGLALNASSRALLMRKLDRSGTATSLTGGI 442
Query: 238 -------------------PPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANM 278
P AAS L A+ + P +S S T+ LL NM
Sbjct: 443 GAPGLNSSVGLPAASVLGAPLTAASLLVQPVGAVPGAPLPIISQSADIGTPTEFLLLKNM 502
Query: 279 FDPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
FDP+ ET+P +D++IRDDV EEC+K G V T F+Y
Sbjct: 503 FDPSVETDPDFDLDIRDDVQEECSKFGVVKHIFVDKHTAGFVY 545
>gi|326523595|dbj|BAJ92968.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 152/343 (44%), Positives = 196/343 (57%), Gaps = 37/343 (10%)
Query: 7 DDLSPE---ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
D PE ERD RT+F QLS + RD+ EFFS GKVRDVRLI +RR KG+ YI
Sbjct: 206 DGTEPEVDPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYI 265
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLH 123
EF D SVP+A+ L GQ LLG ++V+P++AEKN A + + +GG +LY+G+LH
Sbjct: 266 EFYDVMSVPMAIALTGQPLLGQAVMVKPSEAEKNLAQSNATSGGA-ASGGARKLYVGNLH 324
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELA 182
NITED LR +FEPFG+++ +QL VDP TG KG+GFI F +DAK AQ LNG ++A
Sbjct: 325 SNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGFIQFARLEDAKAAQ-SLNGQLDIA 383
Query: 183 GRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL-AEGTGLEL---- 237
GR +KV VTD+ V G + D D+ E G+ L A+ R LM KL GT L
Sbjct: 384 GRVIKVSAVTDQG-GVQLGTTTGDLDDDEGGGLALNASSRALLMRKLDRSGTATSLTGGI 442
Query: 238 -------------------PPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANM 278
P AAS L A+ + P +S S T+ LL NM
Sbjct: 443 GAPGLNSSVGLPAASALGAPLTAASLLVQPVGAVPGAPLPIISQSADIGTPTEFLLLKNM 502
Query: 279 FDPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
FDP+ ET+P +D++IRDDV EEC+K G V T F+Y
Sbjct: 503 FDPSVETDPDFDLDIRDDVQEECSKFGVVKHIFVDKHTAGFVY 545
>gi|28059803|gb|AAO30095.1| splicing factor-like protein [Arabidopsis thaliana]
Length = 527
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 141/328 (42%), Positives = 195/328 (59%), Gaps = 31/328 (9%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 164 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 223
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM--RLYIGSLHFNITEDM 130
+A+ L+GQ LG P++V+P++AEKN A + + G GP +LY+G+LHFN++E
Sbjct: 224 MAIALSGQLFLGQPVMVKPSEAEKNLAQSNSTTV---GGTGPADRKLYVGNLHFNMSELQ 280
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKVG 189
LR IFE FG ++ +QL +DP+TG+ KG+GFI F + +K AQ LNG E+AGR +KV
Sbjct: 281 LRQIFEAFGPVELVQLPLDPETGQCKGFGFIQFVQLEHSKAAQIALNGKLEIAGRTIKVS 340
Query: 190 TVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEG-------TGLELPPAAA 242
+V+D + P + D D+ + G+ L A R LM KL L +P
Sbjct: 341 SVSDHIGTQDSAPKSADFDDDDGGGLALNAQSRAMLMQKLDRSGIATSIVGSLGVPGLNG 400
Query: 243 SALNLAQNAILNSSTP-QVSSSTAPP--------IATQCFLLANMFDPATETNPTWDVEI 293
+A N +N S P V +TA P + ++C LL NMFDPATET P +D+EI
Sbjct: 401 AAFN---QPGMNPSFPTSVLPTTAIPSFVNEHVGLPSECLLLKNMFDPATETEPNFDLEI 457
Query: 294 RDDVIEECNKHG------VGASTVCFIY 315
RDDV +EC+K+G V ++ F+Y
Sbjct: 458 RDDVADECSKYGPVNHIYVDKNSAGFVY 485
>gi|18416114|ref|NP_568220.1| RNA-binding protein 39 [Arabidopsis thaliana]
gi|15451046|gb|AAK96794.1| splicing factor-like protein [Arabidopsis thaliana]
gi|332004077|gb|AED91460.1| RNA-binding protein 39 [Arabidopsis thaliana]
Length = 527
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 142/328 (43%), Positives = 195/328 (59%), Gaps = 31/328 (9%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 164 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 223
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM--RLYIGSLHFNITEDM 130
+A+ L+GQ LG P++V+P++AEKN A + N G GP +LY+G+LHFN++E
Sbjct: 224 MAIALSGQLFLGQPVMVKPSEAEKNLAQS---NSTTVGGTGPADRKLYVGNLHFNMSELQ 280
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKVG 189
LR IFE FG ++ +QL +DP+TG+ KG+GFI F + +K AQ LNG E+AGR +KV
Sbjct: 281 LRQIFEAFGPVELVQLPLDPETGQCKGFGFIQFVQLEHSKAAQIALNGKLEIAGRTIKVS 340
Query: 190 TVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEG-------TGLELPPAAA 242
+V+D + P + D D+ + G+ L A R LM KL L +P
Sbjct: 341 SVSDHIGTQDSAPKSADFDDDDGGGLALNAQSRAMLMQKLDRSGIATSIVGSLGVPGLNG 400
Query: 243 SALNLAQNAILNSSTP-QVSSSTAPP--------IATQCFLLANMFDPATETNPTWDVEI 293
+A N +N S P V +TA P + ++C LL NMFDPATET P +D+EI
Sbjct: 401 AAFN---QPGMNPSFPTSVLPTTAIPSFVNEHVGLPSECLLLKNMFDPATETEPNFDLEI 457
Query: 294 RDDVIEECNKHG------VGASTVCFIY 315
RDDV +EC+K+G V ++ F+Y
Sbjct: 458 RDDVADECSKYGPVNHIYVDKNSAGFVY 485
>gi|326494786|dbj|BAJ94512.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 152/343 (44%), Positives = 195/343 (56%), Gaps = 37/343 (10%)
Query: 7 DDLSPE---ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
D PE ERD RT+F QLS + RD EFFS GKVRDVRLI +RR KG+ YI
Sbjct: 206 DGTEPEVDPERDQRTVFAFQLSLKADERDAYEFFSRAGKVRDVRLIMDRNSRRSKGVGYI 265
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLH 123
EF D SVP+A+ L GQ LLG ++V+P++AEKN A + + +GG +LY+G+LH
Sbjct: 266 EFYDVMSVPMAIALTGQPLLGQAVMVKPSEAEKNLAQSNATSGGA-ASGGARKLYVGNLH 324
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELA 182
NITED LR +FEPFG+++ +QL VDP TG KG+GFI F +DAK AQ LNG ++A
Sbjct: 325 SNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGFIQFARLEDAKAAQ-SLNGQLDIA 383
Query: 183 GRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL-AEGTGLEL---- 237
GR +KV VTD+ V G + D D+ E G+ L A+ R LM KL GT L
Sbjct: 384 GRVIKVSAVTDQG-GVQLGTTTGDLDDDEGGGLALNASSRALLMRKLDRSGTATSLTGGI 442
Query: 238 -------------------PPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANM 278
P AAS L A+ + P +S S T+ LL NM
Sbjct: 443 GAPGLNSSVGLPAASVLGAPLTAASLLVQPVGAVPGAPLPIISQSADIGTPTEFLLLKNM 502
Query: 279 FDPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
FDP+ ET+P +D++IRDDV EEC+K G V T F+Y
Sbjct: 503 FDPSVETDPDFDLDIRDDVQEECSKFGVVKHIFVDKHTAGFVY 545
>gi|356525566|ref|XP_003531395.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 550
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 137/325 (42%), Positives = 187/325 (57%), Gaps = 27/325 (8%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 187 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVP 246
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-----RLYIGSLHFNIT 127
+A+ L+GQ LLG P++V+P++AEKN + G GP +LY+G+LHFN+T
Sbjct: 247 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNASG-GAAGVTGPYGAVDRKLYVGNLHFNMT 305
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPM 186
E LR IFEPFG ++ +QL +D +TG KG+GF+ F + AK AQ LNG E+AGR +
Sbjct: 306 ESQLREIFEPFGPVEIVQLPLDLETGHCKGFGFVQFTHLEHAKAAQ-SLNGKLEIAGRTI 364
Query: 187 KVGTVTDR--NESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELP-PAAAS 243
KV VTD ++ ++LD DE G+ L A R LM +LA L P
Sbjct: 365 KVSCVTDHVASQDTTAKSADLDDDE---GGLTLNAHSRALLMQRLAGADPASLGLPVVNG 421
Query: 244 ALNLAQNAILNSSTPQVSSSTAPPIATQ-------CFLLANMFDPATETNPTWDVEIRDD 296
++ Q L P + + P A + C LL NMFDP+TET P +D++I++D
Sbjct: 422 SVPAQQTISLPIGAPVLPTQVMPNPAVEPVGNPSDCLLLKNMFDPSTETEPDFDIDIKED 481
Query: 297 VIEECNKHG------VGASTVCFIY 315
V EEC+K+G V + F+Y
Sbjct: 482 VEEECSKYGRVKHIFVDKKSSGFVY 506
>gi|313213471|emb|CBY37276.1| unnamed protein product [Oikopleura dioica]
gi|313236201|emb|CBY11524.1| unnamed protein product [Oikopleura dioica]
Length = 497
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/310 (43%), Positives = 182/310 (58%), Gaps = 44/310 (14%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK--GIAYIEFKDPE 69
E+RD+RT+ MQLSQ+ + +DL+EFFS VG VR V++I +RR K GIAYIEFK +
Sbjct: 146 EDRDSRTVLAMQLSQKTKEKDLKEFFSVVGDVRSVKMIQDRHSRRSKAIGIAYIEFKYSQ 205
Query: 70 SVPLAMGLNGQKLLGIPIIVQPTQAEKNR-------AGNTLPNLQPRGTGGPMRLYIGSL 122
SVPLA+GLNGQ + GIPIIVQ +QAEKNR A TL L GP++L I +L
Sbjct: 206 SVPLALGLNGQPVNGIPIIVQQSQAEKNRHAQMVESAKQTLSKL----GNGPIKLKITNL 261
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
I+E+M R IFEPFG++D+++L+ DP TG+S G GF+TF +D K A ++L+ F+L
Sbjct: 262 IDEISEEMFRQIFEPFGRLDSVELIDDPITGKSAGSGFVTFSDSDAGKTALKELDRFDLG 321
Query: 183 GRPMKVGTVT-------DRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGL 235
G+ ++V V D E V N D G+ GR+ LM KLA T L
Sbjct: 322 GKRIRVSVVDKVISRNRDAKEDVKALEDNFD-----------GSVGRIALMNKLAARTDL 370
Query: 236 ELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRD 295
LN + A P+ + I T+CF L+NMF+P+ E W+ +IRD
Sbjct: 371 ---------LNQKEEA----PVPKPVAKPVQAIETRCFQLSNMFNPSKEKTGGWENDIRD 417
Query: 296 DVIEECNKHG 305
DVI E + HG
Sbjct: 418 DVILELSDHG 427
>gi|297811089|ref|XP_002873428.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319265|gb|EFH49687.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 520
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/329 (43%), Positives = 196/329 (59%), Gaps = 34/329 (10%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 158 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 217
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRA-GNTLPNLQPRGTGGPM--RLYIGSLHFNITED 129
+A+ L+GQ LG P++V+P++AEKN A NT P G GP+ +LY+G+LHFN+TE
Sbjct: 218 MAIALSGQPFLGQPVMVKPSEAEKNLAQSNTTP-----GGTGPVDRKLYVGNLHFNMTEL 272
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKV 188
LR IFE FG ++ +QL +DP+TG+ KG+GFI F + +K AQ LNG E+AGR +KV
Sbjct: 273 QLRQIFEAFGPVELVQLPLDPETGQCKGFGFIQFAQLEHSKAAQISLNGKLEIAGRTIKV 332
Query: 189 GTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEG-------TGLELPPAA 241
+V+D + P + D D+ + G+ L A R LM KL L +P
Sbjct: 333 SSVSDHIGTQDAAPKSADFDDDDGGGLALNAQSRALLMQKLDRSGIATSIVGSLGVPGLN 392
Query: 242 ASALNLAQNAILNSS--TPQVSSSTAP-----PIA--TQCFLLANMFDPATETNPTWDVE 292
+A N +N S TP + ++ P P+ ++C LL NMFDPATET +D E
Sbjct: 393 GAAFN---QPGMNPSFPTPVLPTTAIPSFVNEPVGQPSECLLLKNMFDPATETERDFDFE 449
Query: 293 IRDDVIEECNKHG------VGASTVCFIY 315
IR+DV +EC+K+G V ++ F+Y
Sbjct: 450 IREDVADECSKYGEVNHIYVDKNSAGFVY 478
>gi|224034337|gb|ACN36244.1| unknown [Zea mays]
Length = 410
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/333 (42%), Positives = 196/333 (58%), Gaps = 32/333 (9%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F QLS + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 37 ERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 96
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
+A+ L+GQ LLG ++V+P++AEKN + + +GG +LY+G+LH NITED LR
Sbjct: 97 MAIALSGQPLLGQAVMVKPSEAEKNLVQSNATS-GGAASGGARKLYVGNLHSNITEDQLR 155
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKVGTV 191
+FEPFG+++ +QL +D TG KGYGFI F +DAK AQ LNG ++AGR +KV V
Sbjct: 156 QVFEPFGQVELVQLPLDAMTGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGRVIKVSAV 214
Query: 192 TDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL-AEGTGLELPPA-AASALNLAQ 249
TD G + D D+ E G+ L A+ R LM KL GT L A+ + +
Sbjct: 215 TDHVGVQASGATTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSLTGGIGAAGVAVPA 274
Query: 250 NAILNSS------TPQVSSSTAPPIA---------------TQCFLLANMFDPATETNPT 288
+++ ++ +P VS+ + P A T+ LL NMFDP+ ET+P
Sbjct: 275 TSVIGAAGAASLLSPTVSAVGSVPGAPVLPITAQNVIMSTPTEFLLLKNMFDPSLETDPD 334
Query: 289 WDVEIRDDVIEECNKHG------VGASTVCFIY 315
+D++IRDDV +EC+K G V +T F+Y
Sbjct: 335 FDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVY 367
>gi|357519763|ref|XP_003630170.1| RNA-binding protein [Medicago truncatula]
gi|355524192|gb|AET04646.1| RNA-binding protein [Medicago truncatula]
Length = 567
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 200/339 (58%), Gaps = 34/339 (10%)
Query: 7 DDLSPE---ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
+++ PE ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+ YI
Sbjct: 189 ENVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYI 248
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKN----RAGNTLPNLQPRGTGGPMRLYI 119
EF D SVP+A+ L+GQ LLG P++V+P++AEKN A + + P G +LY+
Sbjct: 249 EFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASSGAAVVGPYGAVD-RKLYV 307
Query: 120 GSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG- 178
G+LHFN+TE LR IFEPFG+I+ +QL +D +TG KG+GF+ F + AK AQ LNG
Sbjct: 308 GNLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEHAKAAQ-SLNGK 366
Query: 179 FELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGL--- 235
E+AGR +KV +VTD S + D D+ E G+ L A R LM +LA GT +
Sbjct: 367 LEIAGRTIKVSSVTDHVGSQDTTTKSADFDDDE-GGLTLNAHSRALLMQRLA-GTDITTS 424
Query: 236 --------ELPPAAASALNLAQNAILNSS---TPQVSSSTAPP--IATQCFLLANMFDPA 282
+P A ++ ++ +S T + + A P I ++C LL NMFDP+
Sbjct: 425 IGVPTVNGSVPVQQAFSMPFGNPGVIPASVLPTQVMPTPVAEPVGIPSECLLLKNMFDPS 484
Query: 283 TETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
TE P +D++I++DV EEC+K+G V + F+Y
Sbjct: 485 TEIEPDFDIDIKEDVEEECSKYGRVMHIYVDKRSAGFVY 523
>gi|413934153|gb|AFW68704.1| hypothetical protein ZEAMMB73_109361 [Zea mays]
gi|413934154|gb|AFW68705.1| hypothetical protein ZEAMMB73_109361 [Zea mays]
Length = 536
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 142/333 (42%), Positives = 196/333 (58%), Gaps = 32/333 (9%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F QLS + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 163 ERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 222
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
+A+ L+GQ LLG ++V+P++AEKN + + +GG +LY+G+LH NITED LR
Sbjct: 223 MAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGA-ASGGARKLYVGNLHSNITEDQLR 281
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKVGTV 191
+FEPFG+++ +QL +D TG KGYGFI F +DAK AQ LNG ++AGR +KV V
Sbjct: 282 QVFEPFGQVELVQLPLDAMTGLCKGYGFIQFARLEDAKAAQ-SLNGQLDIAGRVIKVSAV 340
Query: 192 TDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL-AEGTGLELPPA-AASALNLAQ 249
TD G + D D+ E G+ L A+ R LM KL GT L A+ + +
Sbjct: 341 TDHVGVQASGATTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSLTGGIGAAGVAVPA 400
Query: 250 NAILNSS------TPQVSSSTAPPIA---------------TQCFLLANMFDPATETNPT 288
+++ ++ +P VS+ + P A T+ LL NMFDP+ ET+P
Sbjct: 401 TSVIGAAGAASLLSPTVSAVGSVPGAPVLPITAQNVIMSTPTEFLLLKNMFDPSLETDPD 460
Query: 289 WDVEIRDDVIEECNKHG------VGASTVCFIY 315
+D++IRDDV +EC+K G V +T F+Y
Sbjct: 461 FDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVY 493
>gi|356512787|ref|XP_003525097.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 554
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/324 (42%), Positives = 189/324 (58%), Gaps = 25/324 (7%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 191 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVP 250
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM----RLYIGSLHFNITE 128
+A+ L+GQ LLG P++V+P++AEKN + G +LY+G+LHFN+TE
Sbjct: 251 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNASGGAAGVAGPYGAVDRKLYVGNLHFNMTE 310
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMK 187
LR IFEPFG ++ +QL +D +TG KG+GF+ F + AK AQ LNG E+AGR +K
Sbjct: 311 SQLREIFEPFGPVEVVQLPLDLETGHCKGFGFVQFTHLEHAKAAQ-SLNGKLEIAGRTIK 369
Query: 188 VGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL--AEGTGLELPPAAASAL 245
V VTD S + D D+ E G+ L A R LM +L A+ + LP S
Sbjct: 370 VSCVTDHVASQDATAKSADLDDDE-GGLTLNAHSRALLMQRLAGADPASIGLPVVNGSV- 427
Query: 246 NLAQNAI-LNSSTPQVSSSTAP-----PIA--TQCFLLANMFDPATETNPTWDVEIRDDV 297
AQ AI L P + + P P+ ++C LL NMFDP+TET P +D++I++DV
Sbjct: 428 -PAQQAISLPIGAPVLPTLVMPNPVVEPVGNPSECLLLKNMFDPSTETEPDFDIDIKEDV 486
Query: 298 IEECNKHG------VGASTVCFIY 315
EEC+K+G V + F+Y
Sbjct: 487 EEECSKYGRVKHIFVDKKSAGFVY 510
>gi|449448446|ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/332 (42%), Positives = 192/332 (57%), Gaps = 43/332 (12%)
Query: 7 DDLSPE---ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
D PE ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+ Y+
Sbjct: 218 DTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYV 277
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM--RLYIGS 121
EF D SVP+A+ L+GQ LLG P++V+P++AEKN + G G + +LY+G+
Sbjct: 278 EFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGN 337
Query: 122 LHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FE 180
LHFN+TE LR IFE FG ++ +QL +D ++G KG+GF+ F + AK AQ LNG E
Sbjct: 338 LHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQ-SLNGKLE 396
Query: 181 LAGRPMKVGTVTDR---NESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLEL 237
+AGR +KV +VTD ESV SN D D+ E G+ L A R LM KL + TG+
Sbjct: 397 IAGRTIKVSSVTDHIGAQESV--AKSN-DLDDDEGGGLALNAQSRALLMQKL-DRTGI-- 450
Query: 238 PPAAASALNLAQNAILNSSTPQVSSST------------------APPI------ATQCF 273
A S +LN S P S++ PP+ ++C
Sbjct: 451 ---ATSIAGSLGAPVLNGSAPNQRSTSLPVNGQAAVAAPVLPANFTPPVLQSVGSPSECL 507
Query: 274 LLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
LL NMFDP+TET P +D+EI++DV EEC+K+G
Sbjct: 508 LLKNMFDPSTETAPDFDMEIKEDVEEECSKYG 539
>gi|449497695|ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/323 (43%), Positives = 189/323 (58%), Gaps = 40/323 (12%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+ Y+EF D SVP
Sbjct: 227 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVP 286
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM--RLYIGSLHFNITEDM 130
+A+ L+GQ LLG P++V+P++AEKN + G G + +LY+G+LHFN+TE
Sbjct: 287 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETH 346
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKVG 189
LR IFE FG ++ +QL +D ++G KG+GF+ F + AK AQ LNG E+AGR +KV
Sbjct: 347 LREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQ-SLNGKLEIAGRTIKVS 405
Query: 190 TVTDR---NESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
+VTD ESV SN D D+ E G+ L A R LM KL + TG+ A S
Sbjct: 406 SVTDHIGAQESV--AKSN-DLDDDEGGGLALNAQSRALLMQKL-DRTGI-----ATSIAG 456
Query: 247 LAQNAILNSSTPQVSSST------------------APPI------ATQCFLLANMFDPA 282
+LN S P S++ PP+ ++C LL NMFDP+
Sbjct: 457 SLGAPVLNGSAPNQRSTSLPVNGQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPS 516
Query: 283 TETNPTWDVEIRDDVIEECNKHG 305
TET P +D+EI++DV EEC+K+G
Sbjct: 517 TETAPDFDMEIKEDVEEECSKYG 539
>gi|449454219|ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
gi|449506986|ref|XP_004162902.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 562
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 143/348 (41%), Positives = 198/348 (56%), Gaps = 48/348 (13%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F Q+S + RD+ EFFS GKVRDVRLI +RR KG+ Y+EF D SVP
Sbjct: 174 ERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVP 233
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRG-----TGGPMRLYIGSLHFNIT 127
+A+ L+GQ LL P++V+P++AEKN+ +T P G +GG RLY+G+LH NIT
Sbjct: 234 MAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGNLHPNIT 293
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPM 186
ED LR +F FG ++ +Q+ VD ++G KG+GFI F +DA+ A LNG E+AGR +
Sbjct: 294 EDNLRQVFGAFGTVELVQMPVD-ESGHCKGFGFIQFTRLEDARNAL-SLNGQLEIAGRTI 351
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KV TVTD+ G S D DE + G+ L A+ R LM KL + TG A + +
Sbjct: 352 KVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKL-DRTGAASSIAGSLGTH 410
Query: 247 LAQNA-------ILNSST-PQVSSSTA----------------PPIA---------TQCF 273
+ N IL +T P +S T+ PP+ ++C
Sbjct: 411 VVNNTGATMPAPILGGATIPSLSVGTSLAAFPAFPGLGAGVQVPPVTANLLGVGTPSECL 470
Query: 274 LLANMFDPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
LL NMFDP E+ PT+D++IRDDV EEC++ G V ++ F+Y
Sbjct: 471 LLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDRNSAGFVY 518
>gi|357146380|ref|XP_003573971.1| PREDICTED: RNA-binding protein 39-like [Brachypodium distachyon]
Length = 597
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 151/345 (43%), Positives = 196/345 (56%), Gaps = 38/345 (11%)
Query: 7 DDLSPE---ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
D PE ERD RT+F QLS + RD+ EFFS GKVRDVRLI +RR KG+ YI
Sbjct: 209 DGTEPEVDPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYI 268
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLH 123
EF D SVP+A+ L GQ LLG ++V+P++AEKN A + + +GG +LY+G+LH
Sbjct: 269 EFYDVMSVPMAIALTGQPLLGQAVMVKPSEAEKNLAQSNAASGGA-ASGGARKLYVGNLH 327
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELA 182
NITED LR +FEPFG+++ +QL VDP TG KG+GFI F +DAK AQ LNG ++A
Sbjct: 328 SNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGFIQFARLEDAKAAQ-SLNGQLDIA 386
Query: 183 GRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEG---------- 232
GR +KV VTD+ GG + D D+ E G+ L A+ R LM KL
Sbjct: 387 GRVIKVSAVTDQGGVQLGGTTTGDLDDDEGGGLALNASSRALLMRKLDRSGTATSLTGGI 446
Query: 233 ------TGLELPPAAASALNLAQ----------NAILNSSTPQVSSSTAPPIATQCFLLA 276
T + LP A+ LA A+ + P +S S T+ LL
Sbjct: 447 GAPGLNTSVGLPAASVFGAPLAAASLAPTIPTVGAVPGAPLPVISQSADIGTPTEFLLLK 506
Query: 277 NMFDPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
NMFDPA ET+P +D++IRDDV EEC+K G V T F+Y
Sbjct: 507 NMFDPAVETDPDFDLDIRDDVQEECSKFGVVKHIFVDKHTAGFVY 551
>gi|224094981|ref|XP_002310314.1| predicted protein [Populus trichocarpa]
gi|222853217|gb|EEE90764.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 133/318 (41%), Positives = 187/318 (58%), Gaps = 25/318 (7%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+ Y+EF D SVP
Sbjct: 17 ERDQRTVFVYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVP 76
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-----RLYIGSLHFNIT 127
+A+ L+GQ LLG P++V+P++AEKN + G GP +LY+G+LHFN+T
Sbjct: 77 MAITLSGQLLLGQPVMVKPSEAEKNLVQPSASGGGTGGVTGPFGAVDRKLYVGNLHFNMT 136
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPM 186
E LR +FEPFG ++ +QL +D +TG+ KG+GF+ F ++AK AQ LNG E+AGR +
Sbjct: 137 EMQLRQLFEPFGIVELVQLPLDLETGQCKGFGFVQFTQLENAKAAQSALNGKLEIAGRTI 196
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL---------AEGTGLEL 237
KV +VT+ G + D D+ + G+ L A R LM KL A G+ L
Sbjct: 197 KVSSVTEHGGQQDSGVKSADFDDDDGGGLALNAQSRALLMQKLDRTGTATSIAGSLGVPL 256
Query: 238 PPAAA---SALNLAQNAILNSSTPQVSSSTAPPIA-------TQCFLLANMFDPATETNP 287
+A A++L N N + P A ++C LL NMFDPATET P
Sbjct: 257 LNGSAPNQQAISLPVNGQTNIGAAAFPALVLPSPAYESIGQPSECLLLKNMFDPATETEP 316
Query: 288 TWDVEIRDDVIEECNKHG 305
+D++I++DV EEC+++G
Sbjct: 317 DFDLDIKEDVEEECSRYG 334
>gi|147856399|emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]
Length = 461
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 134/311 (43%), Positives = 184/311 (59%), Gaps = 19/311 (6%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 92 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVP 151
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-----RLYIGSLHFNIT 127
+A+ L+G L G P++V+P++AEKN + G GP +LY+G+LHFN+T
Sbjct: 152 MAIALSGHLLHGQPVMVKPSEAEKNLVQSNASGAVSGGIAGPYGAVDRKLYVGNLHFNMT 211
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPM 186
E LR IFEPFG+++ +QL +D +TG+ KG+GF+ F + AK AQ LNG ++AGR +
Sbjct: 212 ELQLRQIFEPFGRVELVQLPLDLETGQCKGFGFVQFAELEHAKAAQ-NLNGKLDIAGRII 270
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
KV +VTD G D D+ + G+ L A R LM KL L +P SA N
Sbjct: 271 KVSSVTDHIGVQDAGAKAADFDDDDGGGLSLNAQSRALLMQKLDRTGSLGVPMLNGSAPN 330
Query: 247 -----LAQNAILNSSTPQ-----VSSSTAPPIA--TQCFLLANMFDPATETNPTWDVEIR 294
L+ N S P V+S + P+ T+C LL NMFDPATE +P +D++I+
Sbjct: 331 QQAISLSINGQAAVSAPALPTQVVTSPASEPVGTPTECLLLKNMFDPATEIDPDFDLDIK 390
Query: 295 DDVIEECNKHG 305
++V EEC+ G
Sbjct: 391 EEVQEECSNFG 401
>gi|452845447|gb|EME47380.1| hypothetical protein DOTSEDRAFT_69347 [Dothistroma septosporum
NZE10]
Length = 607
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 131/333 (39%), Positives = 187/333 (56%), Gaps = 48/333 (14%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+ERD RT+F QL+ R+R+R+L+EFF G V D +++ + R KG+ Y+EFK+ ESV
Sbjct: 216 DERDRRTVFVQQLAARLRSRELKEFFEQAGPVVDAQIVKDRVSGRSKGVGYVEFKEEESV 275
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNITEDM 130
A+ L GQKLLGIPII Q T+AEKNR + G P RLY+G++HF+ITED
Sbjct: 276 QKAIALTGQKLLGIPIIAQLTEAEKNRQARNTEGTATQSNGIPFHRLYVGNIHFSITEDD 335
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
L+ +FEPFG+++ +QL + + GRSKGYGF+ F AK+A E++NGFELAGRP++VG
Sbjct: 336 LKNVFEPFGELEFVQLQKE-EAGRSKGYGFVQFIDPTQAKEALEKMNGFELAGRPIRVGL 394
Query: 191 VTDRN---------ESVGGGPSNLDTD-----EMERAGVDLGATGRL-QLMFKLAEGTGL 235
D+ + GGG +N M G G TG + + + TG
Sbjct: 395 GNDKFTPESTQSLLQRFGGGQANAHAQGSSFSGMGGRGAHAGGTGNFDRTTARDVDKTG- 453
Query: 236 ELPPAAASAL-----------NLAQNAILN--SSTPQVSSSTAP------------PIAT 270
ASAL N +++A++ + T + AP P AT
Sbjct: 454 -----GASALDDTDVGGVNFSNYSRDALMRKLARTDEPEQKMAPKTQQVKKPVVEQPTAT 508
Query: 271 QCFLLANMFDPATETNPTWDVEIRDDVIEECNK 303
+C LL NM+D TE++P W E++DDV EC++
Sbjct: 509 RCVLLKNMYDQNTESDPNWQDELKDDVKSECDE 541
>gi|359475014|ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
Length = 609
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/346 (41%), Positives = 194/346 (56%), Gaps = 48/346 (13%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 215 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVP 274
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRG------TGGPMRLYIGSLHFNI 126
+A+ L+GQ LLG P++V+P++AEKN +T G +GG RLY+G+LHFNI
Sbjct: 275 MAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGLIGPYSGGARRLYVGNLHFNI 334
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRP 185
TED LR +FEPFG ++ +QL D +TG KG+GF+ F +DA+ AQ LNG ++AGR
Sbjct: 335 TEDQLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARLEDARAAQ-SLNGQLDIAGRT 393
Query: 186 MKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL-AEGT----------- 233
+KV VTD+ G + D D+ E G+ L A R LM KL GT
Sbjct: 394 IKVSVVTDQAGLQDIGANAGDFDDDEGGGLSLNARSRAILMQKLDRSGTTPGIAGSLGSP 453
Query: 234 -----GLELPPA----AASALNLAQNAILNSSTP----------QVSSSTAPPIAT---- 270
GL L A AA ++ ++ + P QV + T P I T
Sbjct: 454 VLNNPGLPLSTAPILGAAPVVSPLVAPLVQAPVPGLAGLPGAGLQVPAVTVPSIDTIGVP 513
Query: 271 -QCFLLANMFDPATETNPTWDVEIRDDVIEECNKHGVGASTVCFIY 315
+C +L NMFDP ET P +D++I++DV +EC+K G TV IY
Sbjct: 514 SECLMLKNMFDPKLETEPDFDLDIKEDVQDECSKFG----TVKHIY 555
>gi|297744588|emb|CBI37850.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/346 (41%), Positives = 194/346 (56%), Gaps = 48/346 (13%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 33 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVP 92
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRG------TGGPMRLYIGSLHFNI 126
+A+ L+GQ LLG P++V+P++AEKN +T G +GG RLY+G+LHFNI
Sbjct: 93 MAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGLIGPYSGGARRLYVGNLHFNI 152
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRP 185
TED LR +FEPFG ++ +QL D +TG KG+GF+ F +DA+ AQ LNG ++AGR
Sbjct: 153 TEDQLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARLEDARAAQS-LNGQLDIAGRT 211
Query: 186 MKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL-AEGT----------- 233
+KV VTD+ G + D D+ E G+ L A R LM KL GT
Sbjct: 212 IKVSVVTDQAGLQDIGANAGDFDDDEGGGLSLNARSRAILMQKLDRSGTTPGIAGSLGSP 271
Query: 234 -----GLELPPA----AASALNLAQNAILNSSTP----------QVSSSTAPPIAT---- 270
GL L A AA ++ ++ + P QV + T P I T
Sbjct: 272 VLNNPGLPLSTAPILGAAPVVSPLVAPLVQAPVPGLAGLPGAGLQVPAVTVPSIDTIGVP 331
Query: 271 -QCFLLANMFDPATETNPTWDVEIRDDVIEECNKHGVGASTVCFIY 315
+C +L NMFDP ET P +D++I++DV +EC+K G TV IY
Sbjct: 332 SECLMLKNMFDPKLETEPDFDLDIKEDVQDECSKFG----TVKHIY 373
>gi|222624209|gb|EEE58341.1| hypothetical protein OsJ_09449 [Oryza sativa Japonica Group]
Length = 565
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 149/342 (43%), Positives = 201/342 (58%), Gaps = 43/342 (12%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F QLS + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 186 ERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 245
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
+A+ L+GQ LLG ++V+P++AEKN + + +GG +LY+G+LH NITED LR
Sbjct: 246 MAIALSGQLLLGQQVMVKPSEAEKNLVQSNA-SSSGAASGGARKLYVGNLHSNITEDQLR 304
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFI--TFHSADDAKKAQEQLNG-FELAGRPMK-- 187
+FEPFG+++ +QL +DP TG KG+GF+ +F +DAK AQ LNG ++AGR +K
Sbjct: 305 QVFEPFGQVELVQLPLDPLTGLCKGFGFVQASFARLEDAKAAQS-LNGQLDIAGRVIKAS 363
Query: 188 VGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL------------AEGTGL 235
V VTD+ G + D D+ E G+ L A+ R LM KL GTGL
Sbjct: 364 VSAVTDQAGVQVSGVTTGDLDDDEGGGLALNASSRALLMQKLDRSGVTTSLTAGIAGTGL 423
Query: 236 E----LPPAAASALNLAQNAILNS-----STPQVS-------SSTAPPIATQCFLLANMF 279
LPPA+ ++L + S P VS TAPP ++C LL NMF
Sbjct: 424 NTSVGLPPASVLGAPPVAASVLPTVPGLGSVPGVSLPITTQAIETAPP--SECLLLKNMF 481
Query: 280 DPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
DP+ ET+P +D++I+DDV EEC+K G V +T F+Y
Sbjct: 482 DPSVETDPDFDLDIKDDVQEECSKFGQVKHIFVDKNTSGFVY 523
>gi|218192112|gb|EEC74539.1| hypothetical protein OsI_10059 [Oryza sativa Indica Group]
Length = 567
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 149/342 (43%), Positives = 201/342 (58%), Gaps = 43/342 (12%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F QLS + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 188 ERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 247
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
+A+ L+GQ LLG ++V+P++AEKN + + +GG +LY+G+LH NITED LR
Sbjct: 248 MAIALSGQLLLGQQVMVKPSEAEKNLVQSNA-SSSGAASGGARKLYVGNLHSNITEDQLR 306
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFI--TFHSADDAKKAQEQLNG-FELAGRPMK-- 187
+FEPFG+++ +QL +DP TG KG+GF+ +F +DAK AQ LNG ++AGR +K
Sbjct: 307 QVFEPFGQVELVQLPLDPLTGLCKGFGFVQASFARLEDAKAAQS-LNGQLDIAGRVIKAS 365
Query: 188 VGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL------------AEGTGL 235
V VTD+ G + D D+ E G+ L A+ R LM KL GTGL
Sbjct: 366 VSAVTDQAGVQVSGVTTGDLDDDEGGGLALNASSRALLMQKLDRSGVTTSLTAGIAGTGL 425
Query: 236 E----LPPAAASALNLAQNAILNS-----STPQVS-------SSTAPPIATQCFLLANMF 279
LPPA+ ++L + S P VS TAPP ++C LL NMF
Sbjct: 426 NTSVGLPPASVLGAPPVAASVLPTVPGLGSVPGVSLPITTQAIETAPP--SECLLLKNMF 483
Query: 280 DPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
DP+ ET+P +D++I+DDV EEC+K G V +T F+Y
Sbjct: 484 DPSVETDPDFDLDIKDDVQEECSKFGQVKHIFVDKNTSGFVY 525
>gi|255550678|ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
gi|223544486|gb|EEF46005.1| splicing factor, putative [Ricinus communis]
Length = 609
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/345 (41%), Positives = 194/345 (56%), Gaps = 45/345 (13%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPL 73
RD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP+
Sbjct: 223 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPM 282
Query: 74 AMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRG--TGGPMRLYIGSLHFNITEDML 131
A+ L+GQ LLG P++V+P++AEKN +T G +GG RLY+G+LHFNITED L
Sbjct: 283 AIALSGQPLLGQPVMVKPSEAEKNLVQSTTTVNAGSGPYSGGARRLYVGNLHFNITEDQL 342
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKVGT 190
R +FEPFG ++ +QL +D +TG KG+GF+ F +DAK A LNG E+AGRP+KV T
Sbjct: 343 RQVFEPFGIVELVQLPLD-ETGHCKGFGFVQFARLEDAKNAL-NLNGQVEIAGRPIKVST 400
Query: 191 VTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL----------------AEGTG 234
VTD+ + D D+ E G+ L A R LM KL A TG
Sbjct: 401 VTDQTGMQDSTTNAGDFDDDEGGGLALNARSRAILMQKLDRSGTASSIAGSLGTSAASTG 460
Query: 235 LELPPA----AASALNLAQNAILNSSTP--------------QVSSSTAPPIATQCFLLA 276
L +P A AA + +++ S P + S + ++C LL
Sbjct: 461 LAVPTAPILGAAPVIPPIVAPLISGSAPAFPGLPGASVQLPGAIPSVDTIGVPSECLLLK 520
Query: 277 NMFDPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
NMFDP+ ET P +D++I++DV EC+K G V ++ F+Y
Sbjct: 521 NMFDPSIETEPDFDLDIKEDVQLECSKFGNLQHIYVDKNSAGFVY 565
>gi|340522099|gb|EGR52332.1| predicted protein [Trichoderma reesei QM6a]
Length = 569
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 190/366 (51%), Gaps = 66/366 (18%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTR+L+EFF VG V + +++ + R KG+ Y+EFK
Sbjct: 175 LTEDERDRRTVFVQQLAARLRTRELKEFFEKVGAVNEAQIVKDRISGRSKGVGYVEFKSE 234
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNR------AGNTLPNLQPRGTGGPMRLYIGSL 122
+SVPLA+ L GQKLLGIP+IVQ T+AEKNR + N PN P RLY+G++
Sbjct: 235 DSVPLALQLTGQKLLGIPVIVQHTEAEKNRQARNPDSSNAHPNSVPF-----HRLYVGNI 289
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
HFN+TE L+ +FEPFG+++ +QL D D GRS+GYGF+ F A A++A E++NGF+LA
Sbjct: 290 HFNVTEQDLQAVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKMNGFDLA 348
Query: 183 GRPMKVGTVTD-------------------------------------------RNESVG 199
GRP++VG D R+
Sbjct: 349 GRPIRVGLGNDKFTPESTANLMHKFSGNNQGFQGSAFSGAGGRGQQSTFDRAGGRDSEKT 408
Query: 200 GGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQ 259
GG S LD ++ AGV+ R LM KLA A + N + IL T
Sbjct: 409 GGASALDDTDV--AGVNFNNYSRDALMRKLAR------TDEAPTNGNDERQQILKPKTET 460
Query: 260 VSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNK---HGVGASTVCFIYS 316
+A++C +L NMFDPA E W E+ D+V +E + H V S
Sbjct: 461 KPLPVNVNMASRCVVLHNMFDPAEEEGDDWVKELEDEVRQEAEEKYGHVVHISVDPNSKG 520
Query: 317 VIFLKL 322
I+LK
Sbjct: 521 DIYLKF 526
>gi|212531765|ref|XP_002146039.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
gi|210071403|gb|EEA25492.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
Length = 562
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 197/386 (51%), Gaps = 75/386 (19%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
++L+ +ERD RT+F QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFK
Sbjct: 159 EELNEDERDKRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFK 218
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFN 125
D SVPLA+ L GQKLLGIPII Q T+AEKNR + P RLY+G++HF+
Sbjct: 219 DESSVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGQSASAPFHRLYVGNIHFS 278
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITE+ ++ +FEPFG+++ +QL D +TGRS+GYGF+ F + A++A E++NGF+LAGRP
Sbjct: 279 ITENDIQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRP 337
Query: 186 MKVGTVTD---------------------------------RNESVGGGPSNLDT----- 207
++VG D R GG PSN D
Sbjct: 338 IRVGLGNDKFTPESTANLLQRFQGREQNQQFQGSLFSGHGGRGAQAGGTPSNFDRAGGRD 397
Query: 208 -----------DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSS 256
D+ + AGV+ R LM KLA T P A + L
Sbjct: 398 TDKGTGGASALDDTDVAGVNFNNYSRDALMRKLAR-TDEPEPSADEKSQPL--------- 447
Query: 257 TPQVSSSTAP---PIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVC 312
P+ P +A++C LL NMFDPA E W E+ DDV EC K+G
Sbjct: 448 RPKTEPKPLPVNVNMASRCVLLRNMFDPAEEEGEAWIKELEDDVRAECEEKYG------- 500
Query: 313 FIYSVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 501 ---HVVHISLDPNSQGDIYLKFDRVQ 523
>gi|390604396|gb|EIN13787.1| splicing factor CC1-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 433
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 184/320 (57%), Gaps = 38/320 (11%)
Query: 3 PAYS---DDLSPEE-----RDARTIFCMQLSQRIRTRDLEEFFSSV---GKVRDVRLITC 51
P Y +D +PEE +AR++F QL+ R+ RDL FF G V D R++T
Sbjct: 81 PTYEAPPEDYNPEEPKEDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDARIVTD 140
Query: 52 NKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNR--AGNTLPNLQP- 108
+RR KGI Y+E K E V A+ L+G ++G+PI VQ T+AE+NR AG+ NL P
Sbjct: 141 RLSRRSKGIGYVELKTIELVDQAINLSGTVVMGLPIKVQHTEAERNRTHAGDGSLNLPPG 200
Query: 109 -RGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSAD 167
GT GP +LY+GSLHFN+TE ++ +FEPFG+++ + L DP TGRSKGY FI + A+
Sbjct: 201 VSGTHGPRQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYCFIQYKRAE 260
Query: 168 DAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMF 227
DAK A EQ+ GFELAGR ++V TV ++ G + +E G +L A R LM
Sbjct: 261 DAKMALEQMEGFELAGRTLRVNTVHEK-----GTVKYTQQESLEENGGNLNAASRQALMQ 315
Query: 228 KLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNP 287
KLA + PA A +++ I + + ++ LL NMFDPA ET
Sbjct: 316 KLA-----RIEPARAPVETVSKPVITQT------------LQSKSVLLKNMFDPAEETEK 358
Query: 288 TWDVEIRDDVIEEC-NKHGV 306
WD ++ DDV EC NK+G+
Sbjct: 359 DWDKDLADDVKVECENKYGM 378
>gi|224081877|ref|XP_002306512.1| predicted protein [Populus trichocarpa]
gi|222855961|gb|EEE93508.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 186/305 (60%), Gaps = 27/305 (8%)
Query: 27 RIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIP 86
++ RD+ EFFS GKVRDVRLI +RR KG+ Y+EF D SVP+A+ L+GQ L G P
Sbjct: 4 KVTERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLFGQP 63
Query: 87 IIVQPTQAEKNRAGNTLPNLQPRGTGGPM-----RLYIGSLHFNITEDMLRGIFEPFGKI 141
++V+P++AEKN ++ + G GP +LY+G+LHFN+TE LR +FEPFG +
Sbjct: 64 VMVKPSEAEKNLVQSSASSGGTSGVAGPFGPVDRKLYVGNLHFNMTEMQLRQLFEPFGTV 123
Query: 142 DNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKVGTVTDRNESVGG 200
+ +QL +D +TG+ KG+GF+ F ++AK AQ LNG E+AGR +KV +VT+
Sbjct: 124 ELVQLPLDLETGQCKGFGFVQFTQLENAKAAQSALNGKLEIAGRTIKVSSVTEHGGQQDT 183
Query: 201 GPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTG--------LELPPAAASALN------ 246
G + D D+ + G+ L A R LM KL + TG L +P SA N
Sbjct: 184 GAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVPLLNGSASNQQAISL 242
Query: 247 --LAQNAILNSSTPQ--VSSSTAPPIA--TQCFLLANMFDPATETNPTWDVEIRDDVIEE 300
+ Q AI ++ P +SS PI ++C +L NMFDPATET P +D++I++DV EE
Sbjct: 243 PIIGQTAIGAAALPAPVLSSPAYEPIGQPSECLMLKNMFDPATETEPDFDLDIKEDVEEE 302
Query: 301 CNKHG 305
C+K+G
Sbjct: 303 CSKYG 307
>gi|327293227|ref|XP_003231310.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
gi|326466426|gb|EGD91879.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
Length = 592
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/387 (36%), Positives = 201/387 (51%), Gaps = 81/387 (20%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFK+
Sbjct: 191 LTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNE 250
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM---RLYIGSLHFN 125
ESVPLA+ L GQKLLGIPII Q T+AEKNR P+ + RLY+G++HF+
Sbjct: 251 ESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARN-PDAHSNNNQQSIPFHRLYVGNIHFS 309
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITE L+ +FEPFG++D +QL + +TGRSKGYGF+ F + A++A E++NGF+LAGRP
Sbjct: 310 ITESDLQNVFEPFGELDFVQLQRE-ETGRSKGYGFVQFRDPNQAREALEKMNGFDLAGRP 368
Query: 186 MKVGTVTDR------------------------------------------------NES 197
++VG D+ N+
Sbjct: 369 IRVGLGNDKFSHDPAQLMQRLQQQGHNQGSSYSHHGGRGANVGGSSGGNFDRAGGRDNDK 428
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSST 257
GG S LD ++ AGV+ R LM KLA PAA A + + A
Sbjct: 429 GAGGASALDDTDV--AGVNFNNYSRDALMRKLARTD----EPAAEPAPDEKRKA------ 476
Query: 258 PQVSSSTAP-PI----ATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTV 311
P+ + P P+ A++C LL NMFDPA E +W E+ DDV EC K+G
Sbjct: 477 PKARTEAKPLPVTVNMASRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYG------ 530
Query: 312 CFIYSVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 531 ----HVVHISLDPNTQGDIYLKFDRVQ 553
>gi|296082546|emb|CBI21551.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 187/319 (58%), Gaps = 28/319 (8%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 128 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVP 187
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-----RLYIGSLHFNIT 127
+A+ L+G L G P++V+P++AEKN + G GP +LY+G+LHFN+T
Sbjct: 188 MAIALSGHLLHGQPVMVKPSEAEKNLVQSNASGAVSGGIAGPYGAVDRKLYVGNLHFNMT 247
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPM 186
E LR IFEPFG+++ +QL +D +TG+ KG+GF+ F + AK AQ LNG ++AGR +
Sbjct: 248 ELQLRQIFEPFGRVELVQLPLDLETGQCKGFGFVQFAELEHAKAAQ-NLNGKLDIAGRII 306
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAA---- 242
KV +VTD G D D+ + G+ L A R LM KL + TG+ A +
Sbjct: 307 KVSSVTDHIGVQDAGAKAADFDDDDGGGLSLNAQSRALLMQKL-DRTGIASSIAGSLGVP 365
Query: 243 ---------SALNLAQNAILNSSTPQ-----VSSSTAPPIA--TQCFLLANMFDPATETN 286
A++L+ N S P V+S + P+ T+C LL NMFDPATE +
Sbjct: 366 MLNGSAPNQQAISLSINGQAAVSAPALPTQVVTSPASEPVGTPTECLLLKNMFDPATEID 425
Query: 287 PTWDVEIRDDVIEECNKHG 305
P +D++I+++V EEC+ G
Sbjct: 426 PDFDLDIKEEVQEECSNFG 444
>gi|261191422|ref|XP_002622119.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239589885|gb|EEQ72528.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239612708|gb|EEQ89695.1| RNA splicing factor [Ajellomyces dermatitidis ER-3]
gi|327351781|gb|EGE80638.1| RNA splicing factor [Ajellomyces dermatitidis ATCC 18188]
Length = 583
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 200/386 (51%), Gaps = 77/386 (19%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFKD
Sbjct: 180 LTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKDE 239
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNR-AGNTLPNLQPRGTGGPM-RLYIGSLHFNI 126
ESVPLA+ L GQKLLGIPII Q T+AEKNR A N N P RLY+G++HF+I
Sbjct: 240 ESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANASGNQNSIPFHRLYVGNIHFSI 299
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE L+ +FEPFG++D +QL + + GRS+GYGF+ F + A++A E++NGF+LAGRP+
Sbjct: 300 TESDLQKVFEPFGELDFVQLQKE-EGGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPI 358
Query: 187 KVGTVTDR--------------------------------------------------NE 196
+VG D+ N+
Sbjct: 359 RVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGRGAQAGGSGHFDRAGGRDND 418
Query: 197 SVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSS 256
GG S LD ++ AGV+ R LM KLA + P + +
Sbjct: 419 KAAGGASALDDTDV--AGVNFNNYSRDALMRKLARTDEPAVEPTPDEKRKVPK------- 469
Query: 257 TPQVSSSTAP---PIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVC 312
PQ+++ P +A++C LL NMFDPA E +W E+ DDV EC +K+G
Sbjct: 470 -PQINAKPLPVSVNMASRCVLLRNMFDPAEEEGESWVKELEDDVRAECEDKYG------- 521
Query: 313 FIYSVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 522 ---HVVHIALDPNTQGDIYLKFDRVQ 544
>gi|225438475|ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Vitis vinifera]
Length = 542
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 187/319 (58%), Gaps = 28/319 (8%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 166 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVP 225
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-----RLYIGSLHFNIT 127
+A+ L+G L G P++V+P++AEKN + G GP +LY+G+LHFN+T
Sbjct: 226 MAIALSGHLLHGQPVMVKPSEAEKNLVQSNASGAVSGGIAGPYGAVDRKLYVGNLHFNMT 285
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPM 186
E LR IFEPFG+++ +QL +D +TG+ KG+GF+ F + AK AQ LNG ++AGR +
Sbjct: 286 ELQLRQIFEPFGRVELVQLPLDLETGQCKGFGFVQFAELEHAKAAQ-NLNGKLDIAGRII 344
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAA---- 242
KV +VTD G D D+ + G+ L A R LM KL + TG+ A +
Sbjct: 345 KVSSVTDHIGVQDAGAKAADFDDDDGGGLSLNAQSRALLMQKL-DRTGIASSIAGSLGVP 403
Query: 243 ---------SALNLAQNAILNSSTPQ-----VSSSTAPPIA--TQCFLLANMFDPATETN 286
A++L+ N S P V+S + P+ T+C LL NMFDPATE +
Sbjct: 404 MLNGSAPNQQAISLSINGQAAVSAPALPTQVVTSPASEPVGTPTECLLLKNMFDPATEID 463
Query: 287 PTWDVEIRDDVIEECNKHG 305
P +D++I+++V EEC+ G
Sbjct: 464 PDFDLDIKEEVQEECSNFG 482
>gi|225561416|gb|EEH09696.1| RNA splicing factor Pad-1 [Ajellomyces capsulatus G186AR]
Length = 584
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 201/386 (52%), Gaps = 77/386 (19%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFK+
Sbjct: 181 LTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNE 240
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNR-AGNTLPNLQPRGTGGPM-RLYIGSLHFNI 126
ESVPLA+ L GQKLLGIPII Q T+AEKNR A N N+ P RLY+G++HF+I
Sbjct: 241 ESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNSIPFHRLYVGNIHFSI 300
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE L+ +FEPFG++D +QL + + GRS+GYGF+ F + A++A E++NGF+LAGRP+
Sbjct: 301 TESDLQKVFEPFGELDFVQLQKE-EGGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPI 359
Query: 187 KVGTVTDR--------------------------------------------------NE 196
+VG D+ N+
Sbjct: 360 RVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGRGAQAGGSGHFDRAGGRDND 419
Query: 197 SVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSS 256
GG S LD ++ AGV+ R LM KLA + P + +
Sbjct: 420 KAAGGASALDDTDV--AGVNFNNYSRDALMRKLARTDEPAVEPTPDEKRKVPK------- 470
Query: 257 TPQVSSSTAP---PIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVC 312
PQV++ P +A++C LL NMFDPA E +W E+ DDV EC +K+G
Sbjct: 471 -PQVNAKPLPVSVNMASRCVLLRNMFDPAEEEGESWIKELEDDVRAECEDKYG------- 522
Query: 313 FIYSVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 523 ---HVVHIALDPNTQGDIYLKFDRVQ 545
>gi|154282581|ref|XP_001542086.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
gi|150410266|gb|EDN05654.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
Length = 585
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 201/386 (52%), Gaps = 77/386 (19%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFK+
Sbjct: 182 LTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNE 241
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNR-AGNTLPNLQPRGTGGPM-RLYIGSLHFNI 126
ESVPLA+ L GQKLLGIPII Q T+AEKNR A N N+ P RLY+G++HF+I
Sbjct: 242 ESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNSIPFHRLYVGNIHFSI 301
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE L+ +FEPFG++D +QL + + GRS+GYGF+ F + A++A E++NGF+LAGRP+
Sbjct: 302 TESDLQKVFEPFGELDFVQLQKE-EGGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPI 360
Query: 187 KVGTVTDR--------------------------------------------------NE 196
+VG D+ N+
Sbjct: 361 RVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGRGAQAGGSGHFDRAGGRDND 420
Query: 197 SVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSS 256
GG S LD ++ AGV+ R LM KLA + P + +
Sbjct: 421 KAAGGASALDDTDV--AGVNFNNYSRDALMRKLARTDEPAVEPTPDEKRKVPK------- 471
Query: 257 TPQVSSSTAP---PIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVC 312
PQV++ P +A++C LL NMFDPA E +W E+ DDV EC +K+G
Sbjct: 472 -PQVNAKPLPVSVNMASRCVLLRNMFDPAEEEGESWIKELEDDVRAECEDKYG------- 523
Query: 313 FIYSVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 524 ---HVVHIALDPNTQGDIYLKFDRVQ 546
>gi|325090859|gb|EGC44169.1| RNA splicing factor [Ajellomyces capsulatus H88]
Length = 585
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 201/386 (52%), Gaps = 77/386 (19%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFK+
Sbjct: 182 LTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNE 241
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNR-AGNTLPNLQPRGTGGPM-RLYIGSLHFNI 126
ESVPLA+ L GQKLLGIPII Q T+AEKNR A N N+ P RLY+G++HF+I
Sbjct: 242 ESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNSIPFHRLYVGNIHFSI 301
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE L+ +FEPFG++D +QL + + GRS+GYGF+ F + A++A E++NGF+LAGRP+
Sbjct: 302 TESDLQKVFEPFGELDFVQLQKE-EGGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPI 360
Query: 187 KVGTVTDR--------------------------------------------------NE 196
+VG D+ N+
Sbjct: 361 RVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGRGAQAGGSGHFDRAGGRDND 420
Query: 197 SVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSS 256
GG S LD ++ AGV+ R LM KLA + P + +
Sbjct: 421 KAAGGASALDDTDV--AGVNFNNYSRDALMRKLARTDEPAVEPTPDEKRKVPK------- 471
Query: 257 TPQVSSSTAP---PIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVC 312
PQV++ P +A++C LL NMFDPA E +W E+ DDV EC +K+G
Sbjct: 472 -PQVNAKPLPVSVNMASRCVLLRNMFDPAEEEGESWIKELEDDVRAECEDKYG------- 523
Query: 313 FIYSVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 524 ---HVVHIALDPNTQGDIYLKFDRVQ 546
>gi|349804535|gb|AEQ17740.1| putative rna-binding region containing protein 2 isoform b isoform
15 [Hymenochirus curtipes]
Length = 258
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 121/140 (86%), Gaps = 1/140 (0%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERD+RT+FCMQL+ RIR RDLEEFFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 1 DNLSPEERDSRTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV 60
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
D SV LA+GL GQ++LG+PI+VQ +QAEKNRA NLQ +GT GPMRLY+GSLHFNI
Sbjct: 61 DVSSVALAIGLTGQRVLGVPIVVQASQAEKNRAAALANNLQ-KGTAGPMRLYVGSLHFNI 119
Query: 127 TEDMLRGIFEPFGKIDNIQL 146
TEDMLRGIFEPFG+I++IQL
Sbjct: 120 TEDMLRGIFEPFGRIESIQL 139
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 109/213 (51%), Gaps = 41/213 (19%)
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV-G 189
L F GK+ +++++ D ++ RSKG ++ F A L G + G P+ V
Sbjct: 27 LEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVALAI-GLTGQRVLGVPIVVQA 85
Query: 190 TVTDRNESVG---------GGPSNL------------------------DTDEMERAGVD 216
+ ++N + GP L ++ ++ER G+D
Sbjct: 86 SQAEKNRAAALANNLQKGTAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLERTGID 145
Query: 217 LGATGRLQLMFKLAEGTGLELPPAAASAL----NLAQNAILNSSTPQVSSSTAPPIATQC 272
LG TGRLQLM +LAEGTGL++PPAA AL ++A A+ T S + PIATQC
Sbjct: 146 LGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSIAFGAVAGLQTRISQQSESQPIATQC 205
Query: 273 FLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
F L+NM +P E P WD EI+DDVIEECNKHG
Sbjct: 206 FQLSNM-NP-QEDEPGWDTEIKDDVIEECNKHG 236
>gi|242036887|ref|XP_002465838.1| hypothetical protein SORBIDRAFT_01g046740 [Sorghum bicolor]
gi|241919692|gb|EER92836.1| hypothetical protein SORBIDRAFT_01g046740 [Sorghum bicolor]
Length = 541
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 190/341 (55%), Gaps = 45/341 (13%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F QLS + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 166 ERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVP 225
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
+A+ L+GQ LLG ++V+P++AEKN + + +GG +LY+G+LH NI ED LR
Sbjct: 226 MAIALSGQLLLGQQVMVKPSEAEKNLVQSNA-SSSGAASGGARKLYVGNLHSNINEDQLR 284
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKVGTV 191
+FEPFG+++ +QL +DP TG KG+GF+ F +DAK AQ LNG E+AGR +KV V
Sbjct: 285 QVFEPFGQVELVQLPLDPLTGLCKGFGFVQFVRLEDAKAAQ-SLNGQLEIAGRVIKVSAV 343
Query: 192 TDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAE-----------GT-GLELPP 239
TD+ G + D+ L A+ R LM KL GT GL P
Sbjct: 344 TDQAGVQVSGATGDLDDDEGGGLA-LNASSRALLMQKLDRSGITTSLTGGMGTAGLSTPV 402
Query: 240 AAASALNLAQ-------------------NAILNSSTPQVSSSTAPPIATQCFLLANMFD 280
+ L A L +TP + APP ++C LL NMFD
Sbjct: 403 VIPTVSVLGAAPAAAPLLHPTVPGLGSIPGATLPITTPSI--DLAPP--SECLLLKNMFD 458
Query: 281 PATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
PA ET+P +D++IRDDV EEC+K G V +T F+Y
Sbjct: 459 PALETDPDFDLDIRDDVQEECSKFGQLKHIFVDKNTAGFVY 499
>gi|297836410|ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
gi|297331927|gb|EFH62346.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
Length = 557
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/346 (40%), Positives = 199/346 (57%), Gaps = 40/346 (11%)
Query: 7 DDLSPE---ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
D + PE ERD RT+F Q++ R RD+ EFFS GKVRDVR+I +RR +GI Y+
Sbjct: 169 DKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYV 228
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPN------LQPRGTGGPMRL 117
EF D SVP+A+ L+GQ LLG P++V+P++AEKN +T L P +GG RL
Sbjct: 229 EFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPY-SGGARRL 287
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
Y+G+LH N++ED LR +FEPFG ++ +Q+ D +TG KG+GF+ F +DA+ A LN
Sbjct: 288 YVGNLHINMSEDDLRKVFEPFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNAL-NLN 345
Query: 178 G-FELAGRPMKVGTVTDRNE--SVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL----- 229
G E+AGR +KV VTD+ E G + D D+ + G+ L A R LM KL
Sbjct: 346 GQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGT 405
Query: 230 AEGTGL----ELPPAAASALNLAQNAILNSSTPQVSSSTAPPIA----------TQCFLL 275
A TGL + ++ +LA A++ S P V+ I ++C LL
Sbjct: 406 ASSTGLTTAASIHGGVSTISSLAAPALVQGSFPAVAGLAGAGIIPGVIDPVGVPSECLLL 465
Query: 276 ANMFDPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
NMFDP+T+T +D +I +DV EEC+K G V ++V F+Y
Sbjct: 466 KNMFDPSTQTEDDFDKDIEEDVKEECSKFGNLNHIYVDKNSVGFVY 511
>gi|336468898|gb|EGO57061.1| hypothetical protein NEUTE1DRAFT_66048 [Neurospora tetrasperma FGSC
2508]
gi|350288804|gb|EGZ70029.1| RNA splicing factor Pad-1 [Neurospora tetrasperma FGSC 2509]
Length = 571
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 187/343 (54%), Gaps = 54/343 (15%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTR+L+EFF VG V + +++ + R KG+ Y+EFK+
Sbjct: 175 LTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNE 234
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNIT 127
+SV A+ L GQKLLGIP+IVQ T+AEKNR T P RLY+G++HF+IT
Sbjct: 235 DSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIPFHRLYVGNIHFSIT 294
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E L+ +FEPFG+++ +QL D D GRS+GYGF+ F A A++A E++NGF+LAGRP++
Sbjct: 295 EQDLQNVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIR 353
Query: 188 VGTVTDR---------------------------NESVGGGP--SNLDT----------- 207
VG D+ + + G GP SN D
Sbjct: 354 VGLGNDKFTPESTANLLQRFQGQNHHQQFQGSAFSGAGGRGPTTSNFDRAGARDNEKGTG 413
Query: 208 ----DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSS 263
D+ + AGV+ R LM KLA + PPA+ + + IL T
Sbjct: 414 ASALDDTDVAGVNFNNYSRDALMRKLAR---TDEPPASV----IPERQILKPKTETKPLP 466
Query: 264 TAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECN-KHG 305
+A++C +L NMFDPA E W E+ DDV EE K+G
Sbjct: 467 VNVNMASRCVVLHNMFDPAEEEGENWIKELEDDVREEAEAKYG 509
>gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa]
Length = 571
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 187/343 (54%), Gaps = 54/343 (15%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTR+L+EFF VG V + +++ + R KG+ Y+EFK+
Sbjct: 175 LTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNE 234
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNIT 127
+SV A+ L GQKLLGIP+IVQ T+AEKNR T P RLY+G++HF+IT
Sbjct: 235 DSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIPFHRLYVGNIHFSIT 294
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E L+ +FEPFG+++ +QL D D GRS+GYGF+ F A A++A E++NGF+LAGRP++
Sbjct: 295 EQDLQNVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIR 353
Query: 188 VGTVTDR---------------------------NESVGGGP--SNLDT----------- 207
VG D+ + + G GP SN D
Sbjct: 354 VGLGNDKFTPESTANLLQRFQGQNHHQQFQGSAFSGAGGRGPATSNFDRAGARDNEKGTG 413
Query: 208 ----DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSS 263
D+ + AGV+ R LM KLA + PPA+ + + IL T
Sbjct: 414 ASALDDTDVAGVNFNNYSRDALMRKLAR---TDEPPASV----IPERQILKPKTETKPLP 466
Query: 264 TAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECN-KHG 305
+A++C +L NMFDPA E W E+ DDV EE K+G
Sbjct: 467 VNVNMASRCVVLHNMFDPAEEEGENWIKELEDDVREEAEAKYG 509
>gi|119186105|ref|XP_001243659.1| hypothetical protein CIMG_03100 [Coccidioides immitis RS]
gi|392870366|gb|EAS32162.2| CC1-like family splicing factor [Coccidioides immitis RS]
Length = 595
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/382 (36%), Positives = 200/382 (52%), Gaps = 75/382 (19%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF G V+D +++ + R KG+ Y+EFK+
Sbjct: 198 LTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSKGVGYVEFKNE 257
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAG-NTLPNLQPRGTGGPM-RLYIGSLHFNI 126
ESVPLA+ L GQKLLGIPII Q T+AEKN+A NT ++ P RLY+G++HF+I
Sbjct: 258 ESVPLAIQLTGQKLLGIPIIAQFTEAEKNKAARNTEGHVSGNQNSIPFHRLYVGNIHFSI 317
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE L+ +FEPFG++D +QL D + GRS+GYGF+ F + A++A E++NGF+LAGRP+
Sbjct: 318 TESDLQNVFEPFGELDFVQLQKD-ENGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPI 376
Query: 187 KVGTVTDR--------------------------------------------NESVGGGP 202
+VG D+ N+ GG
Sbjct: 377 RVGLGNDKFSSDPATNLMRLQAQGQQNSLYGQGGRGAATALGGNFDRAGGRDNDKGVGGA 436
Query: 203 SNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSS 262
S LD ++ AGV+ R LM KLA PAA + + + A P+
Sbjct: 437 SALDDTDV--AGVNFNNYSRDALMRKLARTD----EPAADTTADDKRKA------PKARP 484
Query: 263 STAP-PI----ATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVCFIYS 316
P P+ A++C LL NMFDP E +W E+ DDV EC K+G
Sbjct: 485 EAKPLPVSVNMASRCVLLRNMFDPTEEEGDSWVKELEDDVRAECEEKYG----------H 534
Query: 317 VIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 535 VVHIALDPNAQGDIYLKFDRVQ 556
>gi|85076094|ref|XP_955878.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
gi|28916904|gb|EAA26642.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
Length = 576
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/338 (38%), Positives = 184/338 (54%), Gaps = 53/338 (15%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTR+L+EFF VG V + +++ + R KG+ Y+EFK+
Sbjct: 175 LTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNE 234
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNIT 127
+SV A+ L GQKLLGIP+IVQ T+AEKNR T P RLY+G++HF+IT
Sbjct: 235 DSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIPFHRLYVGNIHFSIT 294
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E L+ +FEPFG+++ +QL D D GRS+GYGF+ F A A++A E++NGF+LAGRP++
Sbjct: 295 EQDLQNVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIR 353
Query: 188 VGTVTDR---------------------------NESVGGGP--SNLDT----------- 207
VG D+ + + G GP SN D
Sbjct: 354 VGLGNDKFTPESTANLLQRFQGQNHHQQFQGSAFSGAGGRGPATSNFDRAGARDNEKGTG 413
Query: 208 ----DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSS 263
D+ + AGV+ R LM KLA + PPA+ + + IL T
Sbjct: 414 ASALDDTDVAGVNFNNYSRDALMRKLAR---TDEPPASV----IPERQILKPKTETKPLP 466
Query: 264 TAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC 301
+A++C +L NMFDPA E W E+ DDV EE
Sbjct: 467 VNVNMASRCVVLHNMFDPAEEEGENWIKELEDDVREEA 504
>gi|303318024|ref|XP_003069014.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108695|gb|EER26869.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320036831|gb|EFW18769.1| RNA splicing factor [Coccidioides posadasii str. Silveira]
Length = 593
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/382 (36%), Positives = 200/382 (52%), Gaps = 75/382 (19%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF G V+D +++ + R KG+ Y+EFK+
Sbjct: 196 LTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSKGVGYVEFKNE 255
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAG-NTLPNLQPRGTGGPM-RLYIGSLHFNI 126
ESVPLA+ L GQKLLGIPII Q T+AEKN+A NT ++ P RLY+G++HF+I
Sbjct: 256 ESVPLAIQLTGQKLLGIPIIAQFTEAEKNKAARNTEGHVSGNQNSIPFHRLYVGNIHFSI 315
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE L+ +FEPFG++D +QL D + GRS+GYGF+ F + A++A E++NGF+LAGRP+
Sbjct: 316 TESDLQNVFEPFGELDFVQLQKD-ENGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPI 374
Query: 187 KVGTVTDR--------------------------------------------NESVGGGP 202
+VG D+ N+ GG
Sbjct: 375 RVGLGNDKFSSDPATNLMRLQAQGQQNSLYGQGGRGAATALGGNFDRAGGRDNDKGVGGA 434
Query: 203 SNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSS 262
S LD ++ AGV+ R LM KLA PAA + + + A P+
Sbjct: 435 SALDDTDV--AGVNFNNYSRDALMRKLARTD----EPAADTTADDKRKA------PKARP 482
Query: 263 STAP-PI----ATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVCFIYS 316
P P+ A++C LL NMFDP E +W E+ DDV EC K+G
Sbjct: 483 EAKPLPVSVNMASRCVLLRNMFDPTEEEGDSWVKELEDDVRAECEEKYG----------H 532
Query: 317 VIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 533 VVHIALDPNAQGDIYLKFDRVQ 554
>gi|346972403|gb|EGY15855.1| RNA-binding protein rsd1 [Verticillium dahliae VdLs.17]
Length = 570
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 131/348 (37%), Positives = 187/348 (53%), Gaps = 67/348 (19%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTR+L+EFF VG V + +++ ++R KG+ Y+EFK
Sbjct: 177 LTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQRSKGVGYVEFKSE 236
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNIT 127
++V A+ L GQKLLGIPIIVQ T+AEKNR T + P RLY+G++HFN+T
Sbjct: 237 DTVTQALQLTGQKLLGIPIIVQLTEAEKNRQVRTTEAAGTQSNSIPFHRLYVGNIHFNVT 296
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E L+ +FEPFG+++ +QL D DTGRS+GYGF+ + A A++A E++NGF+LAGRP++
Sbjct: 297 EQDLQAVFEPFGELEFVQLQKD-DTGRSRGYGFVQYRDAGQAREALEKMNGFDLAGRPIR 355
Query: 188 VGTVTD--------------------------------------------RNESVGGGPS 203
VG D R+ GG S
Sbjct: 356 VGLGNDKFTPESTANLLQRFSGREQPFQGSAFSGAGGRGPQNSTFDRAGGRDSEKSGGAS 415
Query: 204 NLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSS 263
LD ++ AGV+ R LM KLA + A NA+ T + +
Sbjct: 416 ALDDTDV--AGVNFNNYSRDALMRKLAR-------------TDDASNAVDERQTLKPKTE 460
Query: 264 TAP-PI----ATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHG 305
T P P+ A++C +L NMFDP E W E+ DDV +E +K+G
Sbjct: 461 TKPLPVNVNMASRCVVLHNMFDPEEEEGEDWAKELEDDVRQEAESKYG 508
>gi|296820488|ref|XP_002849949.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
gi|238837503|gb|EEQ27165.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
Length = 595
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 201/386 (52%), Gaps = 79/386 (20%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF +G V++ +++ + R KG+ Y+EFK+
Sbjct: 194 LTEDERDRRTVFVQQLAARLRTKELIAFFEKIGPVKEAQIVKDRVSGRSKGVGYVEFKNE 253
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNR-AGNTLPNLQPRGTGGPM-RLYIGSLHFNI 126
ESVPLA+ L GQKLLGIPII Q T+AEKNR A N + P RLY+G++HF+I
Sbjct: 254 ESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDSHANSNHQAIPFHRLYVGNIHFSI 313
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE L+ +FEPFG++D +QL + + GRSKGYGF+ F + A++A E++NGF+LAGRP+
Sbjct: 314 TESDLQNVFEPFGELDFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEKMNGFDLAGRPI 372
Query: 187 KVGTVTDR------------------------------------------------NESV 198
+VG D+ N+
Sbjct: 373 RVGLGNDKFSHDPAQLMQRLQQQGHNQGSSYSHHGGRGANSGGSSGGNFDRAGGRDNDKG 432
Query: 199 GGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTP 258
GG S LD ++ AGV+ R LM KLA PAA A + + A P
Sbjct: 433 AGGASALDDTDV--AGVNFNNYSRDALMRKLARTD----EPAAEPAPDEKRKA------P 480
Query: 259 QVSSSTAP-PI----ATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVC 312
+ + P P+ A++C LL NMFDPA E +W E+ DDV EC K+G
Sbjct: 481 KARTEAKPLPVTVNMASRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYG------- 533
Query: 313 FIYSVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 534 ---HVVHISLDPNTQGDIYLKFDRVQ 556
>gi|295664082|ref|XP_002792593.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278707|gb|EEH34273.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 596
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 199/386 (51%), Gaps = 77/386 (19%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFKD
Sbjct: 193 LTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKDE 252
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNR-AGNTLPNLQPRGTGGPM-RLYIGSLHFNI 126
ESVPLA+ L GQKLLGIPII Q T+AEKNR A N N+ P RLY+G++HF+I
Sbjct: 253 ESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNSIPFHRLYVGNIHFSI 312
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE L+ +FEPFG++D +QL + + GRS+GYGF+ F + A++A E++NGF+LAGRP+
Sbjct: 313 TESDLQKVFEPFGELDFVQLQKE-EGGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPI 371
Query: 187 KVGTVTDR--------------------------------------------------NE 196
+VG D+ N+
Sbjct: 372 RVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGRGAQAGGSGNFDRAGGRDND 431
Query: 197 SVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSS 256
GG S LD ++ AGV+ R LM KLA + P + +
Sbjct: 432 KAAGGASALDDTDV--AGVNFNNYSRDALMRKLARTDEPAVEPKPDEKRKVPK------- 482
Query: 257 TPQVSSSTAP---PIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVC 312
PQ+++ P +A++C LL NMFDPA E W E+ DDV EC K+G
Sbjct: 483 -PQLNAKPLPVTVNMASRCVLLRNMFDPAEEEGDGWIKELEDDVRAECEEKYG------- 534
Query: 313 FIYSVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 535 ---HVVHIALDPNTQGDIYLKFDRVQ 557
>gi|20466772|gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana]
Length = 420
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 144/350 (41%), Positives = 202/350 (57%), Gaps = 44/350 (12%)
Query: 7 DDLSPE---ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
D + PE ERD RT+F Q++ R RD+ EFFS GKVRDVR+I +RR +GI Y+
Sbjct: 28 DKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYV 87
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPN------LQPRGTGGPMRL 117
EF D SVP+A+ L+GQ LLG P++V+P++AEKN +T L P +GG RL
Sbjct: 88 EFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPY-SGGARRL 146
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
Y+G+LH N++ED LR +FE FG ++ +Q+ D +TG KG+GF+ F +DA+ A LN
Sbjct: 147 YVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNAL-NLN 204
Query: 178 G-FELAGRPMKVGTVTDRNE--SVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL----- 229
G E+AGR +KV VTD+ E G + D D+ + G+ L A R LM KL
Sbjct: 205 GQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGT 264
Query: 230 AEGTGLELPPA----AASALNLAQNAILNSSTPQVS----SSTAP--------PIA--TQ 271
A TGL + ++ +LA A++ S P V+ S P PI ++
Sbjct: 265 ASSTGLTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGVIPAGFDPIGVPSE 324
Query: 272 CFLLANMFDPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
C LL NMFDP+TET +D +I++DV EEC+K G V ++V F+Y
Sbjct: 325 CLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVY 374
>gi|358386930|gb|EHK24525.1| hypothetical protein TRIVIDRAFT_71881 [Trichoderma virens Gv29-8]
Length = 571
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 136/366 (37%), Positives = 189/366 (51%), Gaps = 66/366 (18%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTR+L+EFF VG V + +++ + R KG+ Y+EFK+
Sbjct: 177 LTEDERDRRTVFVQQLAARLRTRELKEFFEKVGAVNEAQIVKDRISGRSKGVGYVEFKNE 236
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNR------AGNTLPNLQPRGTGGPMRLYIGSL 122
+SV LA+ L GQKLLGIP+IVQ T+AEKNR A N PN P RLY+G++
Sbjct: 237 DSVQLALQLTGQKLLGIPVIVQHTEAEKNRQARNPDASNGHPNSIP-----FHRLYVGNI 291
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
HFN+TE L+ +FEPFG+++ +QL D D GRS+GYGF+ F A A++A E++NGF+LA
Sbjct: 292 HFNVTEQDLQAVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKMNGFDLA 350
Query: 183 GRPMKVGTVTD-------------------------------------------RNESVG 199
GRP++VG D R+
Sbjct: 351 GRPIRVGLGNDKFTPESTANLMHKFSGNNQGFQGSAFSGAGGRGQQSAFDRAGGRDSEKT 410
Query: 200 GGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQ 259
GG S LD ++ AGV+ R LM KLA A + N + IL T
Sbjct: 411 GGASALDDTDV--AGVNFNNYSRDALMRKLAR------TDEAPTNGNDERQQILKPKTET 462
Query: 260 VSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNK---HGVGASTVCFIYS 316
+A++C +L NMFDP E W E+ D+V +E + H V S
Sbjct: 463 KPLPVNVNMASRCVVLHNMFDPTEEEGDDWVKELEDEVRQEAEERYGHVVHISVDPNSKG 522
Query: 317 VIFLKL 322
I+LK
Sbjct: 523 DIYLKF 528
>gi|225677677|gb|EEH15961.1| RNA-binding protein rsd1 [Paracoccidioides brasiliensis Pb03]
Length = 600
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 199/386 (51%), Gaps = 77/386 (19%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFKD
Sbjct: 197 LTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKDE 256
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNR-AGNTLPNLQPRGTGGPM-RLYIGSLHFNI 126
ESVPLA+ L GQKLLGIPII Q T+AEKNR A N N+ P RLY+G++HF+I
Sbjct: 257 ESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNSIPFHRLYVGNIHFSI 316
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE L+ +FEPFG++D +QL + + GRS+GYGF+ F + A++A E++NGF+LAGRP+
Sbjct: 317 TESDLQKVFEPFGELDFVQLQKE-EGGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPI 375
Query: 187 KVGTVTDR--------------------------------------------------NE 196
+VG D+ N+
Sbjct: 376 RVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGRGAQAGGSGNFDRAGGRDND 435
Query: 197 SVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSS 256
GG S LD ++ AGV+ R LM KLA + P + +
Sbjct: 436 KAAGGASALDDTDV--AGVNFNNYSRDALMRKLARTDEPAVEPKPDEKRKVPK------- 486
Query: 257 TPQVSSSTAP---PIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVC 312
PQ+++ P +A++C LL NMFDPA E W E+ DDV EC K+G
Sbjct: 487 -PQLNAKPLPVTVNMASRCVLLRNMFDPAEEEGDGWIKELEDDVRAECEEKYG------- 538
Query: 313 FIYSVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 539 ---HVVHIALDPNTQGDIYLKFDRVQ 561
>gi|315043566|ref|XP_003171159.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
gi|311344948|gb|EFR04151.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
Length = 589
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 200/387 (51%), Gaps = 81/387 (20%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFK+
Sbjct: 188 LTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNE 247
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM---RLYIGSLHFN 125
ESVPLA+ L GQKLLGIPII Q T+AEKNR P+ + RLY+G++HF+
Sbjct: 248 ESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARN-PDAHSSNNQQSIPFHRLYVGNIHFS 306
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITE L+ +FEPFG++D +QL + + GRSKGYGF+ F + A++A E++NGF+LAGRP
Sbjct: 307 ITESDLQNVFEPFGELDFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEKMNGFDLAGRP 365
Query: 186 MKVGTVTDR------------------------------------------------NES 197
++VG D+ N+
Sbjct: 366 IRVGLGNDKFSHDPAQLMQRLQQQGHNQGSSYSHHGGRGANAGGSSGGNFDRAGGRDNDK 425
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSST 257
GG S LD ++ AGV+ R LM KLA PAA A + + A
Sbjct: 426 GAGGASALDDTDV--AGVNFNNYSRDALMRKLARTD----EPAAEPAPDEKRKA------ 473
Query: 258 PQVSSSTAP-PI----ATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTV 311
P+ + P P+ A++C LL NMFDPA E +W E+ DDV EC K+G
Sbjct: 474 PKARTEAKPLPVTVNMASRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYG------ 527
Query: 312 CFIYSVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 528 ----HVVHISLDPNTQGDIYLKFDRVQ 550
>gi|302499164|ref|XP_003011578.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
gi|291175130|gb|EFE30938.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
Length = 594
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 200/387 (51%), Gaps = 81/387 (20%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFK+
Sbjct: 193 LTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNE 252
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM---RLYIGSLHFN 125
ESVPLA+ L GQKLLGIPII Q T+AEKNR P+ + RLY+G++HF+
Sbjct: 253 ESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARN-PDAHSNNNQQSIPFHRLYVGNIHFS 311
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITE L+ +FEPFG++D +QL + + GRSKGYGF+ F + A++A E++NGF+LAGRP
Sbjct: 312 ITESDLQNVFEPFGELDFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEKMNGFDLAGRP 370
Query: 186 MKVGTVTDR------------------------------------------------NES 197
++VG D+ N+
Sbjct: 371 IRVGLGNDKFSHDPAQLMQRLQQQGHNQGSSYSHHGGRGANAGGSSGGNFDRAGGRDNDK 430
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSST 257
GG S LD ++ AGV+ R LM KLA PAA A + + A
Sbjct: 431 GAGGASALDDTDV--AGVNFNNYSRDALMRKLARTD----EPAAEPAPDEKRKA------ 478
Query: 258 PQVSSSTAP-PI----ATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTV 311
P+ + P P+ A++C LL NMFDPA E +W E+ DDV EC K+G
Sbjct: 479 PKARTEAKPLPVTVNMASRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYG------ 532
Query: 312 CFIYSVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 533 ----HVVHISLDPNTQGDIYLKFDRVQ 555
>gi|326471726|gb|EGD95735.1| RNA splicing factor [Trichophyton tonsurans CBS 112818]
Length = 592
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 200/387 (51%), Gaps = 81/387 (20%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFK+
Sbjct: 191 LTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNE 250
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM---RLYIGSLHFN 125
ESVPLA+ L GQKLLGIPII Q T+AEKNR P+ + RLY+G++HF+
Sbjct: 251 ESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARN-PDAHSNNNQQSIPFHRLYVGNIHFS 309
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITE L+ +FEPFG++D +QL + + GRSKGYGF+ F + A++A E++NGF+LAGRP
Sbjct: 310 ITESDLQNVFEPFGELDFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEKMNGFDLAGRP 368
Query: 186 MKVGTVTDR------------------------------------------------NES 197
++VG D+ N+
Sbjct: 369 IRVGLGNDKFSHDPAQLMQRLQQQGHNQGSPYSHHGGRGANAGGSSGGNFDRAGGRDNDK 428
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSST 257
GG S LD ++ AGV+ R LM KLA PAA A + + A
Sbjct: 429 GAGGASALDDTDV--AGVNFNNYSRDALMRKLARTD----EPAAEPAPDEKRKA------ 476
Query: 258 PQVSSSTAP-PI----ATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTV 311
P+ + P P+ A++C LL NMFDPA E +W E+ DDV EC K+G
Sbjct: 477 PKARTEAKPLPVTVNMASRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYG------ 530
Query: 312 CFIYSVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 531 ----HVVHISLDPNTQGDIYLKFDRVQ 553
>gi|326485177|gb|EGE09187.1| RNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 560
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 200/387 (51%), Gaps = 81/387 (20%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFK+
Sbjct: 159 LTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNE 218
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM---RLYIGSLHFN 125
ESVPLA+ L GQKLLGIPII Q T+AEKNR P+ + RLY+G++HF+
Sbjct: 219 ESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARN-PDAHSNNNQQSIPFHRLYVGNIHFS 277
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITE L+ +FEPFG++D +QL + + GRSKGYGF+ F + A++A E++NGF+LAGRP
Sbjct: 278 ITESDLQNVFEPFGELDFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEKMNGFDLAGRP 336
Query: 186 MKVGTVTDR------------------------------------------------NES 197
++VG D+ N+
Sbjct: 337 IRVGLGNDKFSHDPAQLMQRLQQQGHNQGSPYSHHGGRGANAGGSSGGNFDRAGGRDNDK 396
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSST 257
GG S LD ++ AGV+ R LM KLA PAA A + + A
Sbjct: 397 GAGGASALDDTDV--AGVNFNNYSRDALMRKLARTD----EPAAEPAPDEKRKA------ 444
Query: 258 PQVSSSTAP-PI----ATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTV 311
P+ + P P+ A++C LL NMFDPA E +W E+ DDV EC K+G
Sbjct: 445 PKARTEAKPLPVTVNMASRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYG------ 498
Query: 312 CFIYSVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 499 ----HVVHISLDPNTQGDIYLKFDRVQ 521
>gi|226295167|gb|EEH50587.1| RNA splicing factor Pad-1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 199/386 (51%), Gaps = 77/386 (19%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFKD
Sbjct: 197 LTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKDE 256
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNR-AGNTLPNLQPRGTGGPM-RLYIGSLHFNI 126
ESVPLA+ L GQKLLGIPII Q T+AEKNR A N N+ P RLY+G++HF+I
Sbjct: 257 ESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNSIPFHRLYVGNIHFSI 316
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE L+ +FEPFG++D +QL + + GRS+GYGF+ F + A++A E++NGF+LAGRP+
Sbjct: 317 TESDLQKVFEPFGELDFVQLQKE-EGGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPI 375
Query: 187 KVGTVTDR--------------------------------------------------NE 196
+VG D+ N+
Sbjct: 376 RVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGRGAQAGGSGNFDRAGGRDND 435
Query: 197 SVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSS 256
GG S LD ++ AGV+ R LM KLA + P + +
Sbjct: 436 KAAGGASALDDTDV--AGVNFNNYSRDALMRKLARTDEPAVEPKPDEKRKVPK------- 486
Query: 257 TPQVSSSTAP---PIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVC 312
PQ+++ P +A++C LL NMFDPA E W E+ DDV EC K+G
Sbjct: 487 -PQLNAKPLPVTVNMASRCVLLRNMFDPAEEEGDGWIKELEDDVRAECEEKYG------- 538
Query: 313 FIYSVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 539 ---HVVHIALDPNTQGDIYLKFDRVQ 561
>gi|393218616|gb|EJD04104.1| splicing factor, CC1-like protein [Fomitiporia mediterranea MF3/22]
Length = 464
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 178/307 (57%), Gaps = 27/307 (8%)
Query: 5 YSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSV---GKVRDVRLITCNKTRRFKGIA 61
Y D+ ++ +AR++F QL+ R+ RDL FF V DVR++T +RR KGIA
Sbjct: 123 YMDEPKEDDSEARSVFVSQLAARMTARDLGYFFEDKLGDNSVLDVRIVTDRISRRSKGIA 182
Query: 62 YIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNR--AGNTLPNLQPRGTGGPMRLYI 119
Y+EF E V A+ L G ++G+PI++Q T+AE+N+ AG+ NL P +G LY+
Sbjct: 183 YVEFGSIELVDKAISLTGTIVMGLPIMIQHTEAERNKTHAGDGSINLPPGASGRGATLYV 242
Query: 120 GSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGF 179
GSLHFN+TE ++ +FEPFG++D + L D TGRSKGY FI + A+DAK A EQ+ GF
Sbjct: 243 GSLHFNLTESDIKQVFEPFGELDFVDLHKDSATGRSKGYAFIHYKRAEDAKMALEQMEGF 302
Query: 180 ELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPP 239
ELAGR ++V TV ++ ++ +LD E G +L A R LM KLA ++ P
Sbjct: 303 ELAGRTLRVNTVHEKGQTRISTQDSLD----ESGGGNLNAASRQALMQKLAR---IDSAP 355
Query: 240 AAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIE 299
+ P + + A P+ ++ L+ NMFDP ET P WD ++ +DV
Sbjct: 356 V--------------TQQPIMKPTVAQPMTSKSVLMRNMFDPEEETEPAWDKDLAEDVKT 401
Query: 300 ECN-KHG 305
EC K+G
Sbjct: 402 ECQAKYG 408
>gi|302664299|ref|XP_003023781.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
gi|291187796|gb|EFE43163.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
Length = 592
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 200/387 (51%), Gaps = 81/387 (20%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFK+
Sbjct: 191 LTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNE 250
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM---RLYIGSLHFN 125
ESVPLA+ L GQKLLGIPII Q T+AEKNR P+ + RLY+G++HF+
Sbjct: 251 ESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARN-PDAHSNNNQQSIPFHRLYVGNIHFS 309
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITE L+ +FEPFG++D +QL + + GRSKGYGF+ F + A++A E++NGF+LAGRP
Sbjct: 310 ITESDLQNVFEPFGELDFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEKMNGFDLAGRP 368
Query: 186 MKVGTVTDR------------------------------------------------NES 197
++VG D+ N+
Sbjct: 369 IRVGLGNDKFSHDPAQLMQRLQQQGHNQGSSYSHHGGRGANTGGSSGGNFDRAGGRDNDK 428
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSST 257
GG S LD ++ AGV+ R LM KLA PAA A + + A
Sbjct: 429 GAGGASALDDTDV--AGVNFNNYSRDALMRKLARTD----EPAAEPAPDEKRKA------ 476
Query: 258 PQVSSSTAP-PI----ATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTV 311
P+ + P P+ A++C LL NMFDPA E +W E+ DDV EC K+G
Sbjct: 477 PKARTEAKPLPVTVNMASRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYG------ 530
Query: 312 CFIYSVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 531 ----HVVHISLDPNTQGDIYLKFDRVQ 553
>gi|334184263|ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 610
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 144/350 (41%), Positives = 202/350 (57%), Gaps = 44/350 (12%)
Query: 7 DDLSPE---ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
D + PE ERD RT+F Q++ R RD+ EFFS GKVRDVR+I +RR +GI Y+
Sbjct: 218 DKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYV 277
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPN------LQPRGTGGPMRL 117
EF D SVP+A+ L+GQ LLG P++V+P++AEKN +T L P +GG RL
Sbjct: 278 EFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPY-SGGARRL 336
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
Y+G+LH N++ED LR +FE FG ++ +Q+ D +TG KG+GF+ F +DA+ A LN
Sbjct: 337 YVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNAL-NLN 394
Query: 178 G-FELAGRPMKVGTVTDRNE--SVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL----- 229
G E+AGR +KV VTD+ E G + D D+ + G+ L A R LM KL
Sbjct: 395 GQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGT 454
Query: 230 AEGTGLELPPA----AASALNLAQNAILNSSTPQVS----SSTAP--------PIA--TQ 271
A TGL + ++ +LA A++ S P V+ S P PI ++
Sbjct: 455 ASSTGLTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGVIPAGFDPIGVPSE 514
Query: 272 CFLLANMFDPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
C LL NMFDP+TET +D +I++DV EEC+K G V ++V F+Y
Sbjct: 515 CLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVY 564
>gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa]
Length = 575
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 130/338 (38%), Positives = 183/338 (54%), Gaps = 53/338 (15%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTR+L+EFF VG V + +++ + R KG+ Y+EFK+
Sbjct: 174 LTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNE 233
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNIT 127
+SV A+ L GQKLLGIP+IVQ T+AEKNR T P RLY+G++HF+IT
Sbjct: 234 DSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIPFHRLYVGNIHFSIT 293
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E L+ +FEPFG+++ +QL D D GRS+GYGF+ F A A++A E++NGF+LAGRP++
Sbjct: 294 EQDLQNVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIR 352
Query: 188 VGTVTDR---------------------------NESVGGGP--SNLDT----------- 207
VG D+ + + G GP SN D
Sbjct: 353 VGLGNDKFTPESTANLLQRFQGQNHHQQFQGSAFSGAGGRGPATSNFDRAGARDNEKGTG 412
Query: 208 ----DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSS 263
D+ + GV+ R LM KLA + PPA+ + + IL T
Sbjct: 413 ASALDDTDVGGVNFNNYSRDALMRKLAR---TDEPPASV----IPERQILKPKTETKPLP 465
Query: 264 TAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC 301
+A++C +L NMFDPA E W E+ DDV EE
Sbjct: 466 VNVNMASRCVVLHNMFDPAEEEGENWIKELEDDVREEA 503
>gi|443921112|gb|ELU40879.1| splicing factor, CC1-like family protein [Rhizoctonia solani AG-1
IA]
Length = 399
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 132/319 (41%), Positives = 185/319 (57%), Gaps = 37/319 (11%)
Query: 3 PAYSD----DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSV---GKVRDVRLITCNKTR 55
P Y D +++ E+ +AR++F QL+ R+ RDL FF G VRD R++T +R
Sbjct: 47 PIYDDPVIEEINDEDSEARSVFVSQLAARLTARDLGYFFEDKLGEGAVRDARIVTDRLSR 106
Query: 56 RFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGP- 114
R KGI Y+EFK+ + V A+ L+G ++G+PI++Q T++E+N+ G + P G P
Sbjct: 107 RSKGIGYVEFKNIDLVNKAIALSGTIVMGLPIMIQLTESERNKIGPSSSLHLPPGVSHPH 166
Query: 115 ---MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKK 171
M+LY+GSLHFN+TE +R +FEPFG++D + L DP TG+SKGY FI + +DA+
Sbjct: 167 AGSMQLYVGSLHFNLTESDIRQVFEPFGELDFVDLHRDPATGKSKGYCFIQYKRPEDARM 226
Query: 172 AQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDT---DEMERAGVDL-GATGRLQLMF 227
A EQ+ GFELAGR ++V TV D+ G G + T D +E G L +T R QLM
Sbjct: 227 ALEQMEGFELAGRQLRVNTVHDK----GQGTVRISTAPQDSLEDTGGVLNNSTSRHQLMQ 282
Query: 228 KLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNP 287
KLA E P + L + S+ PQ SS +C LL NMFDP ET
Sbjct: 283 KLAR---TEQPSKNNTML-------MKSNIPQTLSS-------RCVLLRNMFDPDEETER 325
Query: 288 TWDVEIRDDVIEEC-NKHG 305
WD ++ DDV EC K+G
Sbjct: 326 DWDKDLADDVRGECEEKYG 344
>gi|18398260|ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor [Arabidopsis thaliana]
gi|133778824|gb|ABO38752.1| At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 561
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 144/350 (41%), Positives = 202/350 (57%), Gaps = 44/350 (12%)
Query: 7 DDLSPE---ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
D + PE ERD RT+F Q++ R RD+ EFFS GKVRDVR+I +RR +GI Y+
Sbjct: 169 DKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYV 228
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPN------LQPRGTGGPMRL 117
EF D SVP+A+ L+GQ LLG P++V+P++AEKN +T L P +GG RL
Sbjct: 229 EFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPY-SGGARRL 287
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
Y+G+LH N++ED LR +FE FG ++ +Q+ D +TG KG+GF+ F +DA+ A LN
Sbjct: 288 YVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNAL-NLN 345
Query: 178 G-FELAGRPMKVGTVTDRNE--SVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL----- 229
G E+AGR +KV VTD+ E G + D D+ + G+ L A R LM KL
Sbjct: 346 GQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGT 405
Query: 230 AEGTGLELPPA----AASALNLAQNAILNSSTPQVS----SSTAP--------PIA--TQ 271
A TGL + ++ +LA A++ S P V+ S P PI ++
Sbjct: 406 ASSTGLTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGVIPAGFDPIGVPSE 465
Query: 272 CFLLANMFDPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
C LL NMFDP+TET +D +I++DV EEC+K G V ++V F+Y
Sbjct: 466 CLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVY 515
>gi|21553746|gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 199/353 (56%), Gaps = 51/353 (14%)
Query: 7 DDLSPE---ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
D + PE ERD RT+F Q++ R RD+ EFFS GKVRDVR+I +RR +GI Y+
Sbjct: 169 DKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYV 228
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPN------LQPRGTGGPMRL 117
EF D SVP+A+ L+GQ LLG P++V+P++AEKN +T L P +GG RL
Sbjct: 229 EFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPY-SGGARRL 287
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
Y+G+LH N++ED LR +FE FG ++ +Q+ D +TG KG+GF+ F +DA+ A LN
Sbjct: 288 YVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNAL-NLN 345
Query: 178 G-FELAGRPMKVGTVTDRNE--SVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL----- 229
G E+AGR +KV VTD+ E G + D D+ + G+ L A R LM KL
Sbjct: 346 GQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGT 405
Query: 230 AEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIA-------------------- 269
A TGL A++ N + I + + P + + P +A
Sbjct: 406 ASSTGL----TTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGGIIPGVIPAGFDPIGV 461
Query: 270 -TQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
++C LL NMFDP+TET +D +I++DV EEC+K G V ++V F+Y
Sbjct: 462 PSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVY 514
>gi|258578315|ref|XP_002543339.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
gi|237903605|gb|EEP78006.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
Length = 582
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 201/380 (52%), Gaps = 73/380 (19%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF G V+D +++ + R KG+ Y+EFK+
Sbjct: 187 LTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSKGVGYVEFKNE 246
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAG-NTLPNLQPRGTGGPM-RLYIGSLHFNI 126
ESVP+A+ L GQKLLGIPII Q T+AEKN+A N ++ P RLY+G++HF+I
Sbjct: 247 ESVPVAIQLTGQKLLGIPIIAQFTEAEKNKAARNAEGHVSGNQNSIPFHRLYVGNIHFSI 306
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE L+ +FEPFG++D +QL D + GRS+GYGF+ F + A++A E++NGF+LAGRP+
Sbjct: 307 TESDLQNVFEPFGELDFVQLQKD-ENGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPI 365
Query: 187 KVGTVTDR------------------------------------------NESVGGGPSN 204
+VG D+ N+ GG S
Sbjct: 366 RVGLGNDKFSSDSATNLMRLQSQGQQGSLYGQGGRGTQAASNFDRAGGRDNDKGIGGASA 425
Query: 205 LDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSST 264
LD ++ AGV+ R LM KLA PAA ++ + + A P+ +
Sbjct: 426 LDDTDV--AGVNFNNYSRDALMRKLARTD----EPAADTSTDDKRKA------PKARTEA 473
Query: 265 AP-PI----ATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVCFIYSVI 318
P P+ A++C LL NMFDP E +W E+ DDV EC K+G V+
Sbjct: 474 KPLPVSVNMASRCVLLRNMFDPTEEEGDSWVKELEDDVRAECEEKYG----------HVV 523
Query: 319 FLKLWSYVQVNLWCRHARKQ 338
+ L Q +++ + R Q
Sbjct: 524 HIALDPNTQGDIYLKFDRVQ 543
>gi|430811054|emb|CCJ31450.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 484
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/349 (39%), Positives = 185/349 (53%), Gaps = 68/349 (19%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
S L+ +ERD RT+F QL+ R+RTR+L FF VG VRD +++ + R KG+ Y+EF
Sbjct: 101 SPKLTEDERDRRTVFVQQLAARLRTRELIAFFEKVGPVRDAQVVKDRVSGRSKGVGYVEF 160
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQP--RGTGGPM-RLYIGSL 122
+D ESV A+ + GQ+LLGIPIIVQ T+AEKNR L R + P RLY+G++
Sbjct: 161 RDEESVHKAINMTGQRLLGIPIIVQLTEAEKNRQAKAEAMLSSGGRQSDAPFHRLYVGNI 220
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
HFN+TED LR IFEPFG+++ +QL +PDTGRS+GYGF+ A+ A E++NGFELA
Sbjct: 221 HFNLTEDDLRQIFEPFGELEFVQLQKEPDTGRSRGYGFV--QDPAQARDALEKMNGFELA 278
Query: 183 GRPMKVGTVTDR----------------------------NESVGG---GPSNLDTDEME 211
GR ++VG D+ E +GG G S++ D+ E
Sbjct: 279 GRAIRVGLGNDKFTPESTSAVLARFSGFTGSAFENKNRGGTERIGGPRDGSSSVSLDDNE 338
Query: 212 RAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQ 271
GV R LM KLA G E ++ LA TP V + ++
Sbjct: 339 AGGVSFNNISRDALMRKLAREEGKE-------SIGLAP----PKPTPAVQ------MTSR 381
Query: 272 CFLLANMFDPAT--------------ETNPTWDVEIRDDVIEEC-NKHG 305
C LL NMF+P E+ W E+ DDV EC NK+G
Sbjct: 382 CVLLKNMFNPQEYVFVLVFKFLIFFRESGDNWIRELEDDVKAECENKYG 430
>gi|356536386|ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 597
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 194/340 (57%), Gaps = 42/340 (12%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F Q+S + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 219 ERDQRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 278
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKN------RAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+A+ L+GQ LLG P++V+P++AEKN N L L +GG +LY+G+LH +I
Sbjct: 279 MAIALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYSGGARKLYVGNLHVSI 338
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRP 185
TE +R +FE FG+++ +QL +D ++G KG+GF+ F +DA+ AQ LNG E+ GR
Sbjct: 339 TEADIRRVFEAFGQVELVQLPLD-ESGHCKGFGFVQFARLEDARNAQ-SLNGQLEIGGRT 396
Query: 186 MKVGTVTDRN--ESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL-------------- 229
+KV VTD++ + VGG + D D+ E G+ L A R LM KL
Sbjct: 397 IKVSAVTDQSGMQEVGG--NTGDFDDDEGGGLSLNACSRAILMQKLDRSGTASSMVGSIG 454
Query: 230 ---AEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIA-----TQCFLLANMFDP 281
TGL L PA + L A L Q+ ++T P I ++C +L NMFDP
Sbjct: 455 NSGVNNTGLNL-PATGNILAAAPVGGLAGGGLQIPTATIPSIDPIGVPSECLMLKNMFDP 513
Query: 282 ATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
ET P +D++I++DV EC+K G V + F+Y
Sbjct: 514 KDETEPDFDLDIKEDVEAECSKFGALKHIYVDKKSAGFVY 553
>gi|296411655|ref|XP_002835545.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629331|emb|CAZ79702.1| unnamed protein product [Tuber melanosporum]
Length = 533
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/347 (37%), Positives = 189/347 (54%), Gaps = 57/347 (16%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFKD
Sbjct: 130 LTEDERDRRTVFVQQLAARLRTKELITFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKDE 189
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNIT 127
SVP A+ L GQKLLGIPII Q T+AEKNR P RLY+G++HF+IT
Sbjct: 190 ASVPKAIQLTGQKLLGIPIIAQLTEAEKNRQARVSAAEATTTNQIPFHRLYVGNIHFSIT 249
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E L+ +FEPFG+++ +QL + + GRS+GYGF+ + + A++A E++NGF+LAGRP++
Sbjct: 250 ESDLQNVFEPFGELEFVQLQKE-EGGRSRGYGFVQYRDPNQAREALEKMNGFDLAGRPIR 308
Query: 188 VGTVTDR---------------------------------------NESVGGGPSNLDTD 208
VG D+ +++ G G S LD
Sbjct: 309 VGLGNDKFTPESTAQMLQRFSGYQGFQGSAFDSRGRGGNDRVGRADDKASGAGASALDDT 368
Query: 209 EMERAGVDLGATGRLQLMFKLAE------GTGLELPPAAASALNLAQNAILNSSTPQVSS 262
++ AGV+ R LM KLA PAA++ +L L P+ +
Sbjct: 369 DV--AGVNFNNYSRDLLMRKLARQDEPAPTDKKTKSPAASNGKDLP----LRQKLPEKVT 422
Query: 263 STAP---PIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHG 305
T P P+A++C +L NMFDPA ET W ++ DDV EC NK+G
Sbjct: 423 KTLPLDVPMASRCVVLKNMFDPAEETGDAWIKDLEDDVKTECENKYG 469
>gi|393247915|gb|EJD55422.1| splicing factor, CC1-like protein [Auricularia delicata TFB-10046
SS5]
Length = 581
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/300 (42%), Positives = 179/300 (59%), Gaps = 30/300 (10%)
Query: 15 DARTIFCMQLSQRIRTRDLEEFFSSV---GKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+AR++F QL+ R+ RDL FF G VRD R++T +RR KGI Y+E + + V
Sbjct: 247 EARSVFVSQLAARLTARDLGYFFEDKLGEGAVRDARIVTDRISRRSKGIGYVELRSIDLV 306
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNR--AGNTLPNLQPRGT---GGPMRLYIGSLHFNI 126
A+ L+G ++G+PI+VQ T+AE+NR AG L NL P + GG M+LY+GSLHFN+
Sbjct: 307 TKALDLSGTIVMGLPIMVQLTEAERNRVHAGENL-NLPPGVSAPQGGAMQLYVGSLHFNL 365
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE ++ +FEPFG++D + L DP TGRSKGY F+ + A+DAK A EQ++GFELAGR +
Sbjct: 366 TEQDIKQVFEPFGELDFVDLHRDPGTGRSKGYAFVQYKRAEDAKMALEQMDGFELAGRTL 425
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
+V +V ++ +V + +D+ E + G +L A R LM KLA PP
Sbjct: 426 RVNSVNEKGVAV-RNTTTIDSLE-DSGGGNLNAASRQALMQKLARID----PP------- 472
Query: 247 LAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHG 305
SS P+ +T+ LL NMFDP ET P WD ++ DDV EC +K+G
Sbjct: 473 -------KSSQPEARKHIPQNQSTRSVLLLNMFDPDEETEPDWDKDLADDVKGECASKYG 525
>gi|358058197|dbj|GAA95989.1| hypothetical protein E5Q_02647 [Mixia osmundae IAM 14324]
Length = 959
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 187/334 (55%), Gaps = 46/334 (13%)
Query: 15 DARTIFCMQLSQRIRTRDLEEFFSS-VGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPL 73
+ R++F QL+ RI + L FF + G VR+ ++I +RR KG+ Y+EF + E+V
Sbjct: 271 EMRSVFVSQLAARIGDQQLHAFFENQAGPVREAKVIVDRISRRSKGVGYVEFMELETVQR 330
Query: 74 AMGLNGQKLLGIPIIVQPTQAEKNR--------------AGNTLP---NLQPRGTGGPMR 116
A+ L+G K+LG+PI VQ T+AEKNR AG T+P + P G
Sbjct: 331 ALALSGMKVLGVPIQVQYTEAEKNRQASTAQSSYGALMDAGFTIPAGSDATPSGAVPYNV 390
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+GSL++++T D +R +F PFG + ++ L DP +G+SKGY ++ F+ DA A+E++
Sbjct: 391 LYVGSLNYSLTADDMREVFTPFGAVASVDLQTDPGSGKSKGYCYVQFYKHVDAIHAREKM 450
Query: 177 NGFELAGRPMKVGTVTDRNESV----GGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEG 232
NGF+LAGR +++ T+++RN + GP L E+ G +L GR++LM KLA
Sbjct: 451 NGFQLAGRQLRISTISERNAILPPMSRSGPVALGDGEI---GPNLNNIGRIELMQKLAR- 506
Query: 233 TGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVE 292
+A N P V P A++C LL NMFDPA ET PTWD +
Sbjct: 507 ----------------TDAASNQPPPTVMRPNIPTAASRCILLKNMFDPAEETEPTWDTD 550
Query: 293 IRDDVIEEC-NKHGVGASTVCFIYSV---IFLKL 322
+RDDV EE +K+G A V S I+LK+
Sbjct: 551 LRDDVKEEIQSKYGAVAELVVQRDSTEGAIYLKM 584
>gi|353238006|emb|CCA69965.1| related to splicing factor HCC1 [Piriformospora indica DSM 11827]
Length = 543
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/320 (39%), Positives = 182/320 (56%), Gaps = 40/320 (12%)
Query: 3 PAY---SDDLSPEE---RDARTIFCMQLSQRIRTRDLEEFFSSV---GKVRDVRLITCNK 53
P Y ++D + EE + R++F QL+ R+ RDL FF G VRD R++T
Sbjct: 180 PKYVPPTEDFNEEEAGDSEQRSVFVTQLAARLTARDLGYFFEEKLGDGAVRDARIVTDRL 239
Query: 54 TRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNR--AGNTLPNLQPRGT 111
+RR KGI Y+E + + V A+ L G ++G+PI VQ T+AE+NR +G+ L NL P T
Sbjct: 240 SRRSKGIGYVELRSLDLVSKAIALTGTVVMGLPIKVQLTEAERNRIHSGDLL-NLPPGVT 298
Query: 112 G---GPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADD 168
GPM+LY+GSLHF +TE+ ++ +FEPFG+++ + L DP TGRSKGY FI + +D
Sbjct: 299 ATSHGPMQLYVGSLHFQLTEEEIKQVFEPFGELEFVDLHRDPATGRSKGYCFIQYRRPED 358
Query: 169 AKKAQEQLNGFELAGRPMKVGTVTDRNESVGGG------PSNLDTDEMERAGVDLGATGR 222
AK A EQ++GFELAGR ++V TV ++ + GG + ++ G +L A R
Sbjct: 359 AKMALEQMDGFELAGRQLRVNTVHEKGVAAPGGVGMSLRAMGNTAESLDEGGGNLNAVSR 418
Query: 223 LQLMFKLAEGTGLELP-PAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDP 281
LM KLA ++P P + +N+ T+C LL N FDP
Sbjct: 419 QALMQKLARTNEPQIPLPVSGPKINIKSQ------------------ETRCILLKNAFDP 460
Query: 282 ATETNPTWDVEIRDDVIEEC 301
A ET+P WD +++DV+ EC
Sbjct: 461 AEETDPDWDKNLQEDVVAEC 480
>gi|407918973|gb|EKG12232.1| hypothetical protein MPH_10639 [Macrophomina phaseolina MS6]
Length = 602
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/370 (36%), Positives = 196/370 (52%), Gaps = 56/370 (15%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT+DL FF VG V++ +++ + R KG+ Y+EFK+
Sbjct: 202 LTEDERDRRTVFVQQLAARLRTKDLIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNE 261
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNIT 127
ESVP A+ L GQKL+GIPII Q T+AEKNR T G P RLY+G++HF+IT
Sbjct: 262 ESVPAAIQLTGQKLMGIPIIAQLTEAEKNRQARTGDGNNGNNNGVPFHRLYVGNIHFSIT 321
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E L+ +FEPFG+++ +QL + + GRS+GYGF+ F AK+A E++NGF+LAGRP++
Sbjct: 322 ESDLQNVFEPFGELEFVQLQKE-EGGRSRGYGFVQFRDPAQAKEALEKMNGFDLAGRPIR 380
Query: 188 VGTVTDR--NESV--------GGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLEL 237
VG D+ ES G GP N +G G F A G +
Sbjct: 381 VGLGNDKFTPESTANLLQRFNGQGPPNFQGSAFSGSGGRGAHAGGSGGTFDRAGGRDNDK 440
Query: 238 PPAAASAL-----------NLAQNAILNSST------------------PQVSSSTAPPI 268
ASAL N +++A++ P V ++ P+
Sbjct: 441 GAGGASALDDTDVAGVNFNNYSRDALMRKLARTDEPADTNGADKQKIIKPAVQAARTLPV 500
Query: 269 ----ATQCFLLANMFDPATETNPTWDVEIRDDVIEECN-KHGVGASTVCFIYSVIFLKLW 323
A++C +L NMFDPA E +W E+ DDV EEC K+G +V+ + L
Sbjct: 501 SVNQASRCVVLKNMFDPAEEEGESWMKELEDDVKEECQAKYG----------TVVHIALD 550
Query: 324 SYVQVNLWCR 333
Q +++ +
Sbjct: 551 PNTQGDIYVK 560
>gi|356575464|ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 600
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/338 (40%), Positives = 190/338 (56%), Gaps = 38/338 (11%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD R +F Q+S + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 222 ERDQRAVFAYQISLKADERDVFEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 281
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKN------RAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+A+ L+GQ LLG P++V+P++AEKN N L L +GG +LY+G+LH +I
Sbjct: 282 MAIALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYSGGARKLYVGNLHISI 341
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRP 185
TE +R +FE FG+++ +QL +D ++G KG+GF+ F +DA+ AQ LNG E+ GR
Sbjct: 342 TEADIRRVFEAFGQVELVQLPLD-ESGHCKGFGFVQFARLEDARNAQ-SLNGQLEIGGRT 399
Query: 186 MKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL---------------- 229
+KV VTD++ G + D D+ E G+ L A R LM KL
Sbjct: 400 IKVSAVTDQSGMQEFGGNTGDFDDDEGGGMSLNACSRAMLMQKLDRSGTASSMVGSLGNS 459
Query: 230 -AEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPI-----ATQCFLLANMFDPAT 283
TGL L PA + L A L Q+ ++T P I A++C +L NMFDP
Sbjct: 460 VVNNTGLNL-PATGNILAAAPVGELAGGGLQIPTATIPSIDTIGVASECLMLKNMFDPKD 518
Query: 284 ETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
E P +D++I++DV EC+K G V + F+Y
Sbjct: 519 EIEPDFDLDIKEDVEAECSKLGTLKHIYVDKKSAGFVY 556
>gi|452986581|gb|EME86337.1| hypothetical protein MYCFIDRAFT_97432, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 540
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/341 (37%), Positives = 175/341 (51%), Gaps = 64/341 (18%)
Query: 10 SPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPE 69
+ +ERD RT+F QL+ R+R+R+L+EFF VG V D +++ + R KG+ Y+EFK+ E
Sbjct: 151 TDDERDRRTVFVQQLAARLRSRELKEFFQQVGDVVDAQIVKDRVSGRSKGVGYVEFKEEE 210
Query: 70 SVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNITE 128
SV A+ L GQKLLGIPII Q T+AEKNR + G P RLY+G++HF+ITE
Sbjct: 211 SVQKAIQLTGQKLLGIPIIAQLTEAEKNRQARNTEGTATQSNGIPFHRLYVGNIHFSITE 270
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
D L+ +FEPFG+++ +QL + + GRSKGYGF+ F AK+A E++NGFELAGRP++V
Sbjct: 271 DDLKNVFEPFGELEFVQLQKE-EAGRSKGYGFVQFIDPAQAKEALEKMNGFELAGRPIRV 329
Query: 189 GTVTDR---------------------------------NESVGGGPSNLDT-------- 207
G D+ + GG N D
Sbjct: 330 GLGNDKFTPESTNSLLQRFGAQAQQAHNFQGSQFSGMGGRGAHAGGTGNFDRPAARDVDK 389
Query: 208 -------DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQV 260
D+ + GV+ R LM KLA E A T Q
Sbjct: 390 TGGASALDDTDVGGVNFSNYSRDALMRKLARTDEPEQKMAP--------------KTQQK 435
Query: 261 SSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC 301
AT+C L+ NM+D TET+P W E+++DV EC
Sbjct: 436 KPVVEQAAATRCVLIKNMYDQNTETDPNWQKELKEDVKGEC 476
>gi|242773880|ref|XP_002478329.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
gi|218721948|gb|EED21366.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
Length = 562
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 136/386 (35%), Positives = 198/386 (51%), Gaps = 75/386 (19%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
++L+ +ERD RT+F QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFK
Sbjct: 159 EELNEDERDKRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFK 218
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFN 125
D SVPLA+ L GQKLLGIPII Q T+AEKNR + P RLY+G++HF+
Sbjct: 219 DEASVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGQSASAPFHRLYVGNIHFS 278
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITE+ ++ +FEPFG+++ +QL D +TGRS+GYGF+ F + A++A E++NGF+LAGRP
Sbjct: 279 ITENDIQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRP 337
Query: 186 MKVGTVTDR--NESVGG-------------------------------GPSNLDT----- 207
++VG D+ ES PSN D
Sbjct: 338 IRVGLGNDKFTPESTANLLQRFQGQGHHQQYQGSAFSGNGGRGAQAGGAPSNFDRAGGRD 397
Query: 208 -----------DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSS 256
D+ + AGV+ R LM KLA E P+A L +
Sbjct: 398 TDKGTGGASALDDTDVAGVNFNNYSRDALMRKLARTD--EPEPSADEKLQPLR------- 448
Query: 257 TPQVSSSTAP---PIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVC 312
P+ P +A++C LL NMFDP E +W E+ DDV EC K+G
Sbjct: 449 -PKTEPKPLPVNVNMASRCVLLRNMFDPTEEEGESWIKELEDDVRAECEEKYG------- 500
Query: 313 FIYSVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 501 ---HVVHISLDPNSQGDIYLKFDRVQ 523
>gi|70996384|ref|XP_752947.1| RNA splicing factor (Pad-1) [Aspergillus fumigatus Af293]
gi|66850582|gb|EAL90909.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus Af293]
gi|159131701|gb|EDP56814.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus A1163]
Length = 566
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 196/380 (51%), Gaps = 64/380 (16%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
S +L+ +ERD RTIF QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EF
Sbjct: 165 SPELNEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 224
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHF 124
K ESV A+ L GQKLLGIPII Q T+AEKNR P RLY+G++HF
Sbjct: 225 KSEESVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGHNHAAPFHRLYVGNIHF 284
Query: 125 NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
+ITE+ L+ +FEPFG+++ +QL D + GRSKGYGF+ F + A++A E++NGF+LAGR
Sbjct: 285 SITENDLQNVFEPFGELEFVQLQKD-EAGRSKGYGFVQFRDPNQAREALEKMNGFDLAGR 343
Query: 185 PMKVGTVTD---------RNESVG---------------------GGPSNLDT------- 207
++VG D R++S G GG SN D
Sbjct: 344 AIRVGLGNDKFTPDSSAQRSQSHGANQPNFQGSSFSGQGGRGIQAGGTSNFDRAGGRDSE 403
Query: 208 --------DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQ 259
D+ + AGV+ R LM KLA T PAA + +L T
Sbjct: 404 KGAGASALDDTDVAGVNFNNYSRDALMRKLAR-TDEPAEPAADD-----KQKVLRPKTET 457
Query: 260 VSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVCFIYSVI 318
+A++C LL NMFDPA E W E+ DDV EC +K+G V+
Sbjct: 458 KPLPVNVNMASRCVLLRNMFDPAEEEGEAWIKELEDDVRAECEDKYG----------HVV 507
Query: 319 FLKLWSYVQVNLWCRHARKQ 338
+ L Q +++ + R Q
Sbjct: 508 HIALDPNSQGDIYLKFDRVQ 527
>gi|453087053|gb|EMF15094.1| splicing factor, CC1-like protein [Mycosphaerella populorum SO2202]
Length = 622
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 125/340 (36%), Positives = 178/340 (52%), Gaps = 62/340 (18%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+ERD RT+F QL+ R+R+R+L +FF VG V D +++ + R KG+ Y+EFKD ESV
Sbjct: 231 DERDRRTVFVQQLAARLRSRELRDFFEQVGPVVDAQIVKDRVSGRSKGVGYVEFKDEESV 290
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNITEDM 130
A+GL GQKLLGIPII Q T+AEKNR T + G P RLY+G++HF+ITE
Sbjct: 291 QKAIGLTGQKLLGIPIIAQLTEAEKNRQARTTEGTATQSNGVPFHRLYVGNIHFSITEAD 350
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
L+ +FEPFG+++ QL + + GRSKGYGF+ F AK+A E++NGFELAGRP++VG
Sbjct: 351 LKNVFEPFGELEFAQLQKE-ENGRSKGYGFVQFIDPAQAKEALEKMNGFELAGRPIRVGL 409
Query: 191 VTDR--NESV-----------------------------GGGPSNLDT------------ 207
D+ ES GG N D
Sbjct: 410 GNDKFTTESTQTLLVKFGSHTPSAQKGSQFSGLGGRGAHAGGTGNFDRPAAARDVDKTGG 469
Query: 208 ----DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSS 263
D+ + GVD R +LM +LA + + I + + ++
Sbjct: 470 ASALDDTDVGGVDFHNYSREKLMKQLAR-------------TDEPEQKIAPKTQVKKPAT 516
Query: 264 TAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNK 303
P A++C L+ NM++ E+ P W E++DDV EC +
Sbjct: 517 FEQPSASRCVLIKNMYNQNEESEPGWQKELKDDVKSECEE 556
>gi|119494703|ref|XP_001264168.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
gi|119412330|gb|EAW22271.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
Length = 566
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 196/380 (51%), Gaps = 64/380 (16%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
S +L+ +ERD RTIF QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EF
Sbjct: 165 SPELNEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 224
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHF 124
K ESV A+ L GQKLLGIPII Q T+AEKNR P RLY+G++HF
Sbjct: 225 KSEESVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGHNHAAPFHRLYVGNIHF 284
Query: 125 NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
+ITE+ L+ +FEPFG+++ +QL D + GRSKGYGF+ F + A++A E++NGF+LAGR
Sbjct: 285 SITENDLQNVFEPFGELEFVQLQKD-EAGRSKGYGFVQFRDPNQAREALEKMNGFDLAGR 343
Query: 185 PMKVGTVTD---------RNESVG---------------------GGPSNLDT------- 207
++VG D R++S G GG SN D
Sbjct: 344 AIRVGLGNDKFTPDSSAQRSQSHGANQPNFQGSSFSGQGGRGIQAGGTSNFDRAGGRDSE 403
Query: 208 --------DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQ 259
D+ + AGV+ R LM KLA T PAA + +L T
Sbjct: 404 KGAGASALDDTDVAGVNFNNYSRDALMRKLAR-TDEPAEPAADD-----KQKVLRPKTET 457
Query: 260 VSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVCFIYSVI 318
+A++C LL NMFDPA E W E+ DDV EC +K+G V+
Sbjct: 458 KPLPVNVNMASRCVLLRNMFDPAEEEGEAWIKELEDDVRAECEDKYG----------HVV 507
Query: 319 FLKLWSYVQVNLWCRHARKQ 338
+ L Q +++ + R Q
Sbjct: 508 HIALDPNSQGDIYLKFDRVQ 527
>gi|342884065|gb|EGU84408.1| hypothetical protein FOXB_05073 [Fusarium oxysporum Fo5176]
Length = 566
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 130/347 (37%), Positives = 182/347 (52%), Gaps = 62/347 (17%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTR+L+EFF VG V + +++ ++R KG+ Y+EFK+
Sbjct: 170 LTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQRSKGVGYVEFKNE 229
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNIT 127
ESV A+ L GQKLLGIP+IVQ T+AEKNR P P RLY+G++HFN+T
Sbjct: 230 ESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPHPNSIPFHRLYVGNIHFNVT 289
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E L+ +FEPFG+++ +QL D + GRS+GYGF+ F A A++A E++NGF+LAGRP++
Sbjct: 290 EQDLQAVFEPFGELEFVQLQKD-ENGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIR 348
Query: 188 VGTVTDR-----------------------------------------------NESVGG 200
VG D+ NE GG
Sbjct: 349 VGLGNDKFTPESTANMLQRFSGQNQNQNFQGSAFSGSGGRGPQSSTFDRAGGRDNEKTGG 408
Query: 201 GPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN-LAQNAILNSSTPQ 259
+ DTD AGV+ R LM KLA SA N + +L T
Sbjct: 409 ASALDDTDV---AGVNFNNYSRDALMRKLAR--------TDDSATNGHDERQVLKPKTET 457
Query: 260 VSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHG 305
+A++C +L NMFDP E W E+ DDV +E +K+G
Sbjct: 458 KPLPVNVNMASRCVVLHNMFDPEEEEGTDWVKELEDDVRQEAESKYG 504
>gi|429860108|gb|ELA34858.1| RNA splicing factor (pad-1) [Colletotrichum gloeosporioides Nara
gc5]
Length = 628
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 131/347 (37%), Positives = 180/347 (51%), Gaps = 69/347 (19%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTRDL+ FF VG V + +++ ++R KG+ Y+EFK+
Sbjct: 177 LTEDERDRRTVFVQQLAARLRTRDLKAFFEKVGPVNEAQIVKDRISQRSKGVGYVEFKNE 236
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNR-------AGNTLPNLQPRGTGGPMRLYIGS 121
ESV A+ L GQKLLGIPIIVQ T+AEKNR A PN P RLY+G+
Sbjct: 237 ESVTQALQLTGQKLLGIPIIVQLTEAEKNRQVRNSETATGAHPNSIPF-----HRLYVGN 291
Query: 122 LHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFEL 181
+HFN+TE L+ +FEPFG+++ +QL D D GRS+GYGF+ + A A++A E++NGF+L
Sbjct: 292 IHFNVTEQDLQAVFEPFGELEFVQLQKD-DNGRSRGYGFVQYREASQAREALEKMNGFDL 350
Query: 182 AGRPMKVGTVTD--------------------------------------------RNES 197
AGRP++VG D R+
Sbjct: 351 AGRPIRVGLGNDKFTPESTANMLQRFPGQNQAYQGSAFSGAGGRGPQTSAFDRAGGRDSE 410
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLA-QNAILNSS 256
GG S LD ++ AGV+ R LM KLA A N A + +L
Sbjct: 411 KSGGASALDDTDV--AGVNFNNYSRDALMRKLAR---------TDEASNGADERQVLKPK 459
Query: 257 TPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNK 303
T +A++C +L NMFDP E W E+ DDV +E K
Sbjct: 460 TEIKPLPVNVSMASRCVVLHNMFDPEEEDGDDWAKELEDDVRQEAEK 506
>gi|302695543|ref|XP_003037450.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
gi|300111147|gb|EFJ02548.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
Length = 409
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 127/313 (40%), Positives = 184/313 (58%), Gaps = 31/313 (9%)
Query: 3 PAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFS-SVGK--VRDVRLITCNKTRRFKG 59
P D +P++ +AR++F QL+ R+ RDL FF +G+ V D R++T +RR KG
Sbjct: 62 PFDEDAPNPQDSEARSVFVSQLAARLTARDLGYFFEDKLGENTVMDARIVTDRISRRSKG 121
Query: 60 IAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNR--AGNTLPNLQPRGT---GGP 114
I Y+EF+ + V A+ L+G ++G+PI+VQ T+AE+NR AG+ NL P + GG
Sbjct: 122 IGYVEFRTVDLVDKALDLSGTVVMGLPIMVQLTEAERNRLHAGDGNLNLPPGVSAPHGGA 181
Query: 115 MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQE 174
M+LY+GSLHFN+TE ++ +FEPFG+++ + L DP TGRSKGY F+ + A+DA+ A E
Sbjct: 182 MQLYVGSLHFNLTEADIKQVFEPFGELEFVDLHRDPTTGRSKGYAFVQYKRAEDARMAME 241
Query: 175 QLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERA-GVDLGATGRLQLMFKLAEGT 233
Q+ GFELAGR +KV TV D+ GG T+ ++ + G +L A R LM KLA
Sbjct: 242 QMEGFELAGRQLKVNTVHDK----GGVVRYAQTESLDDSGGGNLNAASRQALMQKLARTD 297
Query: 234 GLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEI 293
L P + N+ Q + ++ LL NMFDP E+ WD E+
Sbjct: 298 SAPLLPEPVARPNIPQT-----------------MESRSVLLKNMFDPEEESGDDWDKEL 340
Query: 294 RDDVIEEC-NKHG 305
DDV EC +K+G
Sbjct: 341 ADDVKGECESKYG 353
>gi|380478594|emb|CCF43506.1| CC1-like family splicing factor [Colletotrichum higginsianum]
Length = 565
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 129/348 (37%), Positives = 182/348 (52%), Gaps = 67/348 (19%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTRDL+ FF VG V + +++ ++R KG+ Y+EFK+
Sbjct: 172 LTEDERDRRTVFVQQLAARLRTRDLKAFFEKVGPVTEAQIVKDRISQRSKGVGYVEFKNE 231
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNIT 127
+SV A+ L GQKLLGIPIIVQ T+AEKNR T P RLY+G++HFN+T
Sbjct: 232 DSVTQALQLTGQKLLGIPIIVQMTEAEKNRQVRTTETTSAHPNSIPFHRLYVGNIHFNVT 291
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E L+ +FEPFG+++ +QL D D GRS+GYGF+ + A A++A E++NGF+LAGRP++
Sbjct: 292 EQDLQAVFEPFGELEFVQLQKD-DNGRSRGYGFVQYREASQAREALEKMNGFDLAGRPIR 350
Query: 188 VGTVTD--------------------------------------------RNESVGGGPS 203
VG D R+ GG S
Sbjct: 351 VGLGNDKFTPESTANILQRFPGQNPQFQGSAFSGAGGRGPQTSAFDRAGGRDSEKSGGAS 410
Query: 204 NLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSS 263
LD ++ AGV+ R LM KLA + A N + + +
Sbjct: 411 ALDDTDV--AGVNFNNYSRDALMRKLAR-------------TDDASNGVDERQVLKPKTE 455
Query: 264 TAP-PI----ATQCFLLANMFDPATETNPTWDVEIRDDVIEECN-KHG 305
T P P+ A++C +L NMFDP E W E+ DDV +E K+G
Sbjct: 456 TKPLPVNVNMASRCVVLHNMFDPEEEEGDEWVKELEDDVRQEAETKYG 503
>gi|320593519|gb|EFX05928.1| RNA splicing factor [Grosmannia clavigera kw1407]
Length = 610
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 132/347 (38%), Positives = 184/347 (53%), Gaps = 58/347 (16%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTR+L++FF G V + +++ + R KG+ Y+EF+
Sbjct: 201 LTEDERDRRTVFVQQLAARLRTRELKDFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFRSE 260
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRG--TGGPM-RLYIGSLHFN 125
ESV A+ L GQKLLGIP+IVQ T+AEKNR + G TG P RLY+G++HF+
Sbjct: 261 ESVTAALQLTGQKLLGIPVIVQMTEAEKNRQVRSTAEATSNGNSTGVPFHRLYVGNIHFS 320
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
ITE LR +FEPFG+++ +QL D DTGRS+GYGF+ F +D A++A E++NGF+LAGRP
Sbjct: 321 ITESDLRNVFEPFGELEFVQLQKD-DTGRSRGYGFVQFRDSDQAREALEKMNGFDLAGRP 379
Query: 186 MKVGTVTDR-----------------------------NESVGGGPSNLDT--------- 207
++VG D+ + G SN D
Sbjct: 380 IRVGLGNDKFTPESTANLMKGFQGRDQQQQHQGSAFSGSGGRGQNASNFDRAGGRDNDKG 439
Query: 208 ------DEMERAGVDLGATGRLQLMFKLAE-------GTGLELPPAAASALNLAQNAILN 254
D+ + AGV+ R LM KLA GTG AAA + Q IL
Sbjct: 440 SGAGALDDTDVAGVNFNNYSRDALMRKLARADDSSANGTGGGSTSAAA---DEQQRPILK 496
Query: 255 SSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC 301
T +A++C +L NMFD + E W E+ DDV +E
Sbjct: 497 PRTEAKPLPVNVNMASRCVVLHNMFDTSEEEGEEWIKELEDDVRQEA 543
>gi|302915553|ref|XP_003051587.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
gi|256732526|gb|EEU45874.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/363 (36%), Positives = 188/363 (51%), Gaps = 60/363 (16%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTR+L+EFF VG V + +++ ++R KG+ Y+EFK+
Sbjct: 170 LTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQRSKGVGYVEFKNE 229
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNIT 127
ESV A+ L GQKLLGIP+IVQ T+AEKNR P P RLY+G++HFN+T
Sbjct: 230 ESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPHPNSIPFHRLYVGNIHFNVT 289
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E L+ +FEPFG+++ +QL D + GRS+GYGF+ F A A++A E++NGF+LAGRP++
Sbjct: 290 EQDLQAVFEPFGELEFVQLQKD-ENGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIR 348
Query: 188 VGTVTDR----------------NESVGG---------GP--SNLDT------------- 207
VG D+ N+S G GP S D
Sbjct: 349 VGLGNDKFTPESTANMLQRFSGQNQSFQGSAFSGAGGRGPQSSTFDRAGGRDSEKTGGSS 408
Query: 208 --DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTA 265
D+ + AGV+ R LM KLA N N P++ +
Sbjct: 409 ALDDTDVAGVNFNNYSRDALMRKLAR----------TDDTNTNGNDERQVLKPKMETKPL 458
Query: 266 P---PIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNK---HGVGASTVCFIYSVIF 319
P +A++C +L NMFDP E W E+ DDV +E H V S I+
Sbjct: 459 PMNVNMASRCVVLHNMFDPEEEEGDDWVKELEDDVRQEAESRYGHVVHISVDPNSKGDIY 518
Query: 320 LKL 322
LK
Sbjct: 519 LKF 521
>gi|310798506|gb|EFQ33399.1| CC1-like family splicing factor [Glomerella graminicola M1.001]
Length = 565
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/348 (37%), Positives = 182/348 (52%), Gaps = 67/348 (19%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTRDL+ FF VG V + +++ ++R KG+ Y+EFK+
Sbjct: 172 LTEDERDRRTVFVQQLAARLRTRDLKAFFEKVGPVTEAQIVKDRISQRSKGVGYVEFKNE 231
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNIT 127
+SV A+ L GQKLLGIPIIVQ T+AEKNR T P RLY+G++HFN+T
Sbjct: 232 DSVTQALQLTGQKLLGIPIIVQMTEAEKNRQVRTTETTAAHPNSIPFHRLYVGNIHFNVT 291
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E L+ +FEPFG+++ +QL D D GRS+GYGF+ + A A++A E++NGF+LAGRP++
Sbjct: 292 EQDLQAVFEPFGELEFVQLQKD-DNGRSRGYGFVQYREASQAREALEKMNGFDLAGRPIR 350
Query: 188 VGTVTD--------------------------------------------RNESVGGGPS 203
VG D R+ GG S
Sbjct: 351 VGLGNDKFTPESTANILQRFPGQNPQYQGSAFSGAGGRGPQTSAFDRAGGRDSEKSGGAS 410
Query: 204 NLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSS 263
LD ++ AGV+ R LM KLA + A N + + +
Sbjct: 411 ALDDTDV--AGVNFNNYSRDALMRKLAR-------------TDDASNGVDERQLLKPKTE 455
Query: 264 TAP-PI----ATQCFLLANMFDPATETNPTWDVEIRDDVIEECN-KHG 305
T P P+ A++C +L NMFDP E W E+ DDV +E K+G
Sbjct: 456 TKPLPVNVNMASRCVVLHNMFDPEEEEGDDWVKELEDDVRQEAETKYG 503
>gi|408394044|gb|EKJ73300.1| hypothetical protein FPSE_06565 [Fusarium pseudograminearum CS3096]
Length = 568
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 181/347 (52%), Gaps = 60/347 (17%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTR+L+EFF VG V + +++ ++R KG+ Y+EFK+
Sbjct: 170 LTEDERDRRTVFVQQLAARLRTRELKEFFERVGPVNEAQIVKDRISQRSKGVGYVEFKNE 229
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNIT 127
ESV A+ L GQKLLGIP+IVQ T+AEKNR P P RLY+G++HFN+T
Sbjct: 230 ESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPHPNSIPFHRLYVGNIHFNVT 289
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E L+ +FEPFG+++ +QL D + GRS+GYGF+ F A A++A E++NGF+LAGRP++
Sbjct: 290 EQDLQAVFEPFGELEFVQLQKD-ENGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIR 348
Query: 188 VGTVTDR------------------------------------------------NESVG 199
VG D+ NE G
Sbjct: 349 VGLGNDKFTPESTANMLQRFSGQNQQNPNFQGSAFSGSGGRGPQNSTFDRAGGRDNEKTG 408
Query: 200 GGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQ 259
G + DTD AGV+ R LM KLA +A + +L T
Sbjct: 409 GASALDDTDV---AGVNFNNYSRDALMRKLAR------TDDSAPTNGHEERQVLKPKTET 459
Query: 260 VSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHG 305
+A++C +L NMFDP E W E+ DDV +E +K+G
Sbjct: 460 KPLPVNVNMASRCVVLHNMFDPEEEEGTDWVKELEDDVRQEAESKYG 506
>gi|10334491|emb|CAC10207.1| putative splicing factor [Cicer arietinum]
Length = 392
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/341 (39%), Positives = 187/341 (54%), Gaps = 37/341 (10%)
Query: 7 DDLSPE---ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
D++ PE ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+ YI
Sbjct: 13 DNVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYI 72
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-----RLY 118
EF D SVP+A+ L+GQ LLG P++V+P++AEKN + + G GP +LY
Sbjct: 73 EFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNATS-GAAGVTGPYGAVDRKLY 131
Query: 119 IGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
+G+LHFN+TE LR IFEPFG+I+ +QL +D +TG KG+GF+ F + AK + E
Sbjct: 132 VGNLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEHAKASSEFKWK 191
Query: 179 FELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELP 238
K +VTD S + D D+ E G+ L A R LM +LA G ++P
Sbjct: 192 IGDCWPNNKGSSVTDHVGSQDTTAKSADFDDDE-GGLTLNAHSRALLMQRLA---GADIP 247
Query: 239 -----PAAASALNLAQNAILNSSTPQVSSSTAPP-------------IATQCFLLANMFD 280
P + + Q L P V + P + ++C LL NMFD
Sbjct: 248 TSIGVPMVNGPVPVQQAFSLPIGNPGVIPAQVLPAQVMPTPVVEPVGVPSECLLLKNMFD 307
Query: 281 PATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
P+TET P +D++I++DV EEC+K+G V + F+Y
Sbjct: 308 PSTETEPDFDLDIKEDVEEECSKYGRVKHIYVDKRSAGFVY 348
>gi|46121573|ref|XP_385341.1| hypothetical protein FG05165.1 [Gibberella zeae PH-1]
Length = 568
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/350 (36%), Positives = 185/350 (52%), Gaps = 66/350 (18%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTR+L+EFF VG V + +++ ++R KG+ Y+EFK+
Sbjct: 170 LTEDERDRRTVFVQQLAARLRTRELKEFFERVGPVNEAQIVKDRISQRSKGVGYVEFKNE 229
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNIT 127
ESV A+ L GQKLLGIP+IVQ T+AEKNR P P RLY+G++HFN+T
Sbjct: 230 ESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPHPNSIPFHRLYVGNIHFNVT 289
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E L+ +FEPFG+++ +QL D + GRS+GYGF+ F A A++A E++NGF+LAGRP++
Sbjct: 290 EQDLQAVFEPFGELEFVQLQKD-ENGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIR 348
Query: 188 VGTVTDR------------------------------------------------NESVG 199
VG D+ NE G
Sbjct: 349 VGLGNDKFTPESTANMLQRFSGQNQQNPNFQGSAFSGSGGRGPQNSTFDRAGGRDNEKTG 408
Query: 200 GGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQ 259
G + DTD AGV+ R LM KLA +A + +L P+
Sbjct: 409 GASALDDTDV---AGVNFNNYSRDALMRKLAR------TDDSAPTNGHEERQVL---KPK 456
Query: 260 VSSSTAP---PIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHG 305
+ + P +A++C +L NMFDP E W E+ DDV +E +K+G
Sbjct: 457 METKPLPVNVNMASRCVVLHNMFDPEEEEGTDWVKELEDDVRQEAESKYG 506
>gi|378731264|gb|EHY57723.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 562
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/372 (36%), Positives = 189/372 (50%), Gaps = 71/372 (19%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L +FF G V++ +++ + R KG+ Y+EFK+
Sbjct: 161 LTEDERDRRTVFVQQLAARLRTKELIQFFEKAGPVKEAQIVKDRVSGRSKGVGYVEFKNE 220
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNIT 127
ESVPLA+ + GQKLLGIPII Q T+AEKNR P RLY+G++HF+IT
Sbjct: 221 ESVPLAIQMTGQKLLGIPIIAQLTEAEKNRQARNPEASTSHHNSVPFHRLYVGNIHFSIT 280
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E L+ +FEPFG+++ +QL D +TGRS+GYGF+ F + A++A E++NGF+LAGRP++
Sbjct: 281 EQDLQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPIR 339
Query: 188 VGTVTDR---------------------------------------------------NE 196
VG D+ N+
Sbjct: 340 VGLGNDKFTPESTANLLQRFQGQNHSGGSQGSAFSGLGGRGAHAGGSGGAFDRAGGRDND 399
Query: 197 SVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSS 256
G S LD ++ AGV+ R LM KLA PA + A A+L
Sbjct: 400 KGAGNASALDDTDV--AGVNFNNYSRDALMRKLARTD----EPAHEAETKRA--AVL--- 448
Query: 257 TPQVSSSTAP---PIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNK---HGVGAST 310
P+ S P A++C LL NMFDPA E W E+ DDV EC + H V S
Sbjct: 449 -PKKESKPLPVNVSQASRCVLLRNMFDPAEEEGENWVKELEDDVRAECEEKYGHVVHISV 507
Query: 311 VCFIYSVIFLKL 322
I+LK
Sbjct: 508 DPNTQGDIYLKF 519
>gi|115397599|ref|XP_001214391.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
gi|114192582|gb|EAU34282.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
Length = 568
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/380 (36%), Positives = 198/380 (52%), Gaps = 64/380 (16%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
S +L+ +ERD RTIF QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EF
Sbjct: 167 SPELNEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 226
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHF 124
K+ ESV A+ L GQKLLGIPII Q T+AEKNR P RLY+G++HF
Sbjct: 227 KNEESVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGSNHAAPFHRLYVGNIHF 286
Query: 125 NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
+ITE L+ +FEPFG+++ +QL D +TGRS+GYGF+ F + A++A E++NGF+LAGR
Sbjct: 287 SITESDLQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKMNGFDLAGR 345
Query: 185 PMKVGTVTD---------RNESVG---------------------GGPSNLDT------- 207
++VG D R +S G GG +N D
Sbjct: 346 AIRVGLGNDKFTPESNAQRMQSQGASQQNFQGSMFSGQGGRGVQAGGTNNFDRAGGRESE 405
Query: 208 --------DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQ 259
D+ + AGV+ R LM KLA P+ SA + + IL T
Sbjct: 406 KGAGASALDDTDVAGVNFNNYSRDALMRKLARTD----EPSEPSADD--KQKILRPKTET 459
Query: 260 VSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVCFIYSVI 318
+A++C LL NMFDPA E +W E+ DDV EC +K+G V+
Sbjct: 460 KPLPVNVNMASRCVLLRNMFDPAEEEGESWIKELEDDVRAECEDKYG----------HVV 509
Query: 319 FLKLWSYVQVNLWCRHARKQ 338
+ L Q +++ + R Q
Sbjct: 510 HIALDPNSQGDIYLKFDRVQ 529
>gi|402084391|gb|EJT79409.1| RNA splicing factor Pad-1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 601
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/367 (36%), Positives = 186/367 (50%), Gaps = 63/367 (17%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L EFF G V +++ + R KG+ Y+EFK
Sbjct: 202 LTEDERDRRTVFVQQLAARLRTKELHEFFEQAGPVAAAQIVKDRVSNRSKGVGYVEFKSE 261
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGP----MRLYIGSLHF 124
ES+P A+ L GQKL GIP+IVQPT+AEKNR T N G RLY+G++HF
Sbjct: 262 ESLPAALQLTGQKLAGIPVIVQPTEAEKNRQVRTTENSNANGAQQNSVLFHRLYVGNIHF 321
Query: 125 NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
+ITE LR +F PFG++ +QL + D GRS+GYGF+ ++ +A++A E++NGF+LAGR
Sbjct: 322 SITEPDLRTVFGPFGELRFVQLQKE-DNGRSRGYGFVEYNDPANAREALEKMNGFDLAGR 380
Query: 185 PMKVGTVTD----------------------------------------------RNESV 198
P++VG D R+
Sbjct: 381 PIRVGLGNDKFTPESTANIMQRYPGTNGGNQGQGYPGRNGQANGPQSSNFDRAGGRDNDK 440
Query: 199 GGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTP 258
GGG S LD ++ AGV+ + R LM KLA AS+ + IL T
Sbjct: 441 GGGASALDDTDV--AGVNFNSYSRDALMRKLARTD-------EASSAPPERQQILKPKTE 491
Query: 259 QVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNK---HGVGASTVCFIY 315
+A++C LL NMFDPA E+ W ++ +DV EE K H V S
Sbjct: 492 IKPLPVNVNMASRCVLLKNMFDPAEESGEDWIKDLENDVREEAEKKYGHVVHISVDPNSN 551
Query: 316 SVIFLKL 322
I+LK
Sbjct: 552 GDIYLKF 558
>gi|297259926|ref|XP_002798213.1| PREDICTED: RNA-binding protein 39-like [Macaca mulatta]
Length = 427
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 110/189 (58%), Positives = 134/189 (70%), Gaps = 16/189 (8%)
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
L F GKI++IQLM+D +TGRSKGYGFITF ++ AKKA EQLNGFELAGRPMKVG
Sbjct: 169 LEEFFSTVGKIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 228
Query: 191 VTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL----N 246
VT+R ++ S LD+DE+ER G+DLG TGRLQLM +LAEGTGL++PPAA AL +
Sbjct: 229 VTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGS 287
Query: 247 LAQNAILNSSTPQVSSST----------APPIATQCFLLANMFDPATETNPTWDVEIRDD 296
LA A+ + T ++S T P+ATQCF L+NMF+P TE WD EI+DD
Sbjct: 288 LAFGAVADLQT-RLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDD 346
Query: 297 VIEECNKHG 305
VIEECNKHG
Sbjct: 347 VIEECNKHG 355
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+L+PEERDART+FCMQL+ RIR RDLEEFFS+VGK+ ++L+ ++T R KG +I F
Sbjct: 143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKIESIQLMMDSETGRSKGYGFITFS 202
Query: 67 DPESVPLAM-GLNGQKLLGIPIIV 89
D E A+ LNG +L G P+ V
Sbjct: 203 DSECAKKALEQLNGFELAGRPMKV 226
>gi|392571432|gb|EIW64604.1| splicing factor CC1-like protein [Trametes versicolor FP-101664
SS1]
Length = 344
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 126/310 (40%), Positives = 177/310 (57%), Gaps = 33/310 (10%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSV---GKVRDVRLITCNKTRRFKGIAY 62
+D+ SP++ +AR++F QL+ R+ RDL FF G V D R++T +RR KGI Y
Sbjct: 2 NDEPSPDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGSVMDSRIVTDRISRRSKGIGY 61
Query: 63 IEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQ-PRGTGGP---MRLY 118
+EF+ E V A+GL+G ++G+PI +Q T+AE+NR NL P G P M+LY
Sbjct: 62 VEFRTVELVDRAIGLSGTVVMGLPIQIQHTEAERNRLHPGDGNLNLPPGVSAPHGGMQLY 121
Query: 119 IGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
+GSLHFN+TE ++ +FEPFG+++ + L DP TGRSKGY F+ + A+DAK A EQ+ G
Sbjct: 122 VGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDAKMALEQMEG 181
Query: 179 FELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLA--EGTGLE 236
FELAGR ++V TV ++ + LD E G +L A R LM KLA + ++
Sbjct: 182 FELAGRTLRVNTVHEKGSTRYTQQDTLD----EAGGGNLNAASRQALMQKLARTDSAPVK 237
Query: 237 LPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDD 296
L P A + PQ S + LL NMF+P ET WD ++ DD
Sbjct: 238 LEPVARPHI------------PQTMQS-------RSVLLKNMFNPEEETERDWDKDLADD 278
Query: 297 VIEEC-NKHG 305
V EC K+G
Sbjct: 279 VKSECATKYG 288
>gi|389644626|ref|XP_003719945.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
gi|351639714|gb|EHA47578.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
Length = 564
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 195/383 (50%), Gaps = 77/383 (20%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTR+L+EFF G V + +++ + R KG+ Y+EFK
Sbjct: 167 LTEDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTE 226
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
ESV A+ L GQKLLGIP+IVQPT+AEKNRA T + + RLY+G++HF+ITE
Sbjct: 227 ESVAAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVPFHRLYVGNIHFSITE 286
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
L+ +FEPFG+++ +QL D D+GRS+GYGF+ F A A++A E++NGF+LAGRP++V
Sbjct: 287 QDLQNVFEPFGELEFVQLQKD-DSGRSRGYGFVQFRDATQAREALEKMNGFDLAGRPIRV 345
Query: 189 GTVTDR------------------NESVGGG-------------PSNLDT---------- 207
G D+ + G PSN D
Sbjct: 346 GLGNDKFTPESTANLLRGFQGPNGQQQYQGSAFSGSGGRGAAGQPSNFDRAGGRDNDKGS 405
Query: 208 -----DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSS 262
D+ + AGV+ R LM KLA + + IL T
Sbjct: 406 GASALDDTDVAGVNFNNFSRDALMRKLAR--------TDEPSTTQPERQILKPRT----- 452
Query: 263 STAP-PI-----ATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVCFIY 315
P PI A++C +L NMFDPA E W E+ +DV +E K+G
Sbjct: 453 EVKPLPINNVNQASRCVVLHNMFDPAEEEGDDWVKELEEDVRQEAEEKYG---------- 502
Query: 316 SVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 503 HVVHISLDPNSQGDIYLKFDRVQ 525
>gi|406866575|gb|EKD19615.1| RNA splicing factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 587
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 133/387 (34%), Positives = 197/387 (50%), Gaps = 79/387 (20%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFK+
Sbjct: 184 LTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNE 243
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNR------AGNTLPNLQPRGTGGPMRLYIGSL 122
ESVP A+ L GQKLLGIPII Q T+AEKNR A ++ PN P RLY+G++
Sbjct: 244 ESVPAAIQLTGQKLLGIPIIAQLTEAEKNRQVRNPEATSSNPNQIPF-----HRLYVGNI 298
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
HF+ITE L+ +FEPFG+++ +QL + + GRS+GYGF+ F A++A E++NGF+LA
Sbjct: 299 HFSITESDLQNVFEPFGELEFVQLQKE-EQGRSRGYGFVQFRDPSQAREALEKMNGFDLA 357
Query: 183 GRPMKVGTVTDR------------------------------------------------ 194
GRP++VG D+
Sbjct: 358 GRPIRVGLGNDKFTPESTASLLQRFQGQSHQQQFQGSAFSGAGGRGPQAANGGNFDRAGG 417
Query: 195 --NESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAI 252
NE GG S LD ++ GV+ R LM KLA PA A+ + +
Sbjct: 418 RDNEKSSGGASALDDTDV--GGVNFNNYSRDALMRKLARTD----EPAPATKGRDERREV 471
Query: 253 LNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTV 311
+ T + +A++C +L NMFDPA E +W+ E+ DDV E K+G
Sbjct: 472 VKPKTEAKALPVNVNMASRCVVLKNMFDPAEEEGDSWEKELEDDVRAEAEEKYG------ 525
Query: 312 CFIYSVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 526 ----HVVHISLDPNSQGDIYLKFDRVQ 548
>gi|400598297|gb|EJP66014.1| CC1-like family splicing factor [Beauveria bassiana ARSEF 2860]
Length = 556
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 182/349 (52%), Gaps = 68/349 (19%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTR+L+EFF VG V + +++ + R KG+ Y+EFKD
Sbjct: 162 LTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVTEAQIVKDRISGRSKGVGYVEFKDE 221
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNR------AGNTLPNLQPRGTGGPMRLYIGSL 122
+SV A+ L GQKLLGIP+IVQ T+AEKNR AG PN P RLY+G++
Sbjct: 222 DSVATALQLTGQKLLGIPVIVQVTEAEKNRQARNTEAGGPHPNHVPF-----HRLYVGNI 276
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
HFN+TE+ LR +FEPFG+++ +QL D ++ RS+GYGF+ F A A++A E++NGF+LA
Sbjct: 277 HFNVTEEDLRAVFEPFGELEFVQLQKD-ESDRSRGYGFVQFRDATQAREALEKMNGFDLA 335
Query: 183 GRPMKVGTVTD---------------------------------------------RNES 197
GRP++VG D R+
Sbjct: 336 GRPIRVGLGNDKFTPESTANMLQRFSGQNSSNQQGSSFSGSGGRGGQNSNFDRAGARDSE 395
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSST 257
GG S LD ++ GV+ R LM KLA S + +L T
Sbjct: 396 KTGGASALDDTDV--GGVNFNNYSRDALMRKLAR--------TDESNKGSEERPVLKPRT 445
Query: 258 PQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHG 305
+ A++C +L NMF+P E W E+ DDV +E +K+G
Sbjct: 446 EKKPLPVNVNTASRCVVLHNMFNPDEEEGDDWVKELEDDVRQEAEDKYG 494
>gi|440470687|gb|ELQ39749.1| RNA-binding protein rsd1 [Magnaporthe oryzae Y34]
Length = 566
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 195/383 (50%), Gaps = 77/383 (20%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTR+L+EFF G V + +++ + R KG+ Y+EFK
Sbjct: 167 LTEDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTE 226
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
ESV A+ L GQKLLGIP+IVQPT+AEKNRA T + + RLY+G++HF+ITE
Sbjct: 227 ESVAAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVPFHRLYVGNIHFSITE 286
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
L+ +FEPFG+++ +QL D D+GRS+GYGF+ F A A++A E++NGF+LAGRP++V
Sbjct: 287 QDLQNVFEPFGELEFVQLQKD-DSGRSRGYGFVQFRDATQAREALEKMNGFDLAGRPIRV 345
Query: 189 GTVTDR------------------NESVGGG-------------PSNLDT---------- 207
G D+ + G PSN D
Sbjct: 346 GLGNDKFTPESTANLLRGFQGPNGQQQYQGSAFSGSGGRGAAGQPSNFDRAGGRDNDKGS 405
Query: 208 -----DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSS 262
D+ + AGV+ R LM KLA + + IL T
Sbjct: 406 GASALDDTDVAGVNFNNFSRDALMRKLAR--------TDEPSTTQPERQILKPRT----- 452
Query: 263 STAP-PI-----ATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVCFIY 315
P PI A++C +L NMFDPA E W E+ +DV +E K+G
Sbjct: 453 EVKPLPINNVNQASRCVVLHNMFDPAEEEGDDWVKELEEDVRQEAEEKYG---------- 502
Query: 316 SVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 503 HVVHISLDPNSQGDIYLKFDRVQ 525
>gi|255941952|ref|XP_002561745.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586368|emb|CAP94118.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 562
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/360 (39%), Positives = 194/360 (53%), Gaps = 45/360 (12%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
S +L+ +ERD RTIF QL+ R+R +DL FF G V+D +++ + R KG+ Y+EF
Sbjct: 162 SPELNEDERDRRTIFVQQLAARLRIKDLFTFFEKAGPVKDAQIVKDRVSGRSKGVGYVEF 221
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNR-AGNTLPNLQPRGTGGPMRLYIGSLHF 124
K+ ESV A+ L GQ LLGIPII Q T+AEKNR A NT T RLY+G++HF
Sbjct: 222 KNEESVAAAIRLTGQMLLGIPIIAQLTEAEKNRQARNTESTSGHHHTAPFHRLYVGNVHF 281
Query: 125 NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
+ITE+ L +FEPFG+++ +QL D +TGRSKGY F+ F + + A+ A E++NGFELAGR
Sbjct: 282 SITEEDLTNVFEPFGELEFVQLQKD-ETGRSKGYAFVQFANPEQARDALEKMNGFELAGR 340
Query: 185 PMKVGTVTDR--NESVGGGPSNLDTDEMERAGVDLGATGRLQLM------FKLAEGTGLE 236
++VG D+ ++ PS T++ G G + F A G E
Sbjct: 341 AIRVGLGNDKFTPDTHANRPSGASTNQPNFQGSSFSGQGGRGVQAGGSNSFDRAGGREPE 400
Query: 237 LPPAAASAL-----------NLAQNAIL----NSSTPQVS-----------SSTAP-PI- 268
A ASAL N +++A++ + PQ S + T P PI
Sbjct: 401 -KGAGASALDDTDVAGVNFNNYSRDALMRKLARTDDPQPSVDDRQKFLRPKTETKPLPIN 459
Query: 269 ---ATQCFLLANMFDPATETNPTWDVEIRDDVIEECNK---HGVGASTVCFIYSVIFLKL 322
A++C LL NMFDPA ET W E+ +DV EC K H V S I+LK
Sbjct: 460 VNMASRCVLLRNMFDPAEETGENWVKELEEDVRSECEKKYGHVVHISLDASSQGDIYLKF 519
>gi|449296279|gb|EMC92299.1| hypothetical protein BAUCODRAFT_38330 [Baudoinia compniacensis UAMH
10762]
Length = 634
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 183/349 (52%), Gaps = 66/349 (18%)
Query: 10 SPE----ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
SPE ERD RT+F QL+ R+RT++L+ FF +VG V + +++ + R KG+ Y+EF
Sbjct: 236 SPEPTDDERDRRTVFVQQLAARLRTKELQAFFEAVGPVVEAQIVKDRVSGRSKGVGYVEF 295
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHF 124
KD ESV A+ L GQKLLGIPII Q T+AEKNR + G P RLY+G++HF
Sbjct: 296 KDEESVQKAIQLTGQKLLGIPIIAQLTEAEKNRQARHTEGTATQSNGIPFHRLYVGNIHF 355
Query: 125 NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
+ITED L+ +FEPFG+++ +QL + + GRSKGYGF+ F AK+A E++NGFELAGR
Sbjct: 356 SITEDDLKNVFEPFGELEFVQLQKE-EQGRSKGYGFVQFIDPAQAKEALEKMNGFELAGR 414
Query: 185 PMKVGTVTD------------RNESVG--------------------GGPSNLDT----- 207
P++VG D R S G GG +N D
Sbjct: 415 PIRVGLGNDKFTPESTQSLLQRFASQGQAAAFQGSSFSGMGGRGAHAGGQANFDRASGRD 474
Query: 208 ----------DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSST 257
D+ + AGV+ R LM KLA S +A + T
Sbjct: 475 ADKTGGASALDDTDVAGVNFSNYSRDALMRKLAR--------TDDSEEKVAPKTMQKKPT 526
Query: 258 PQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECN-KHG 305
V P ++C LL N+++ A ET P W E+ +DV EC+ K+G
Sbjct: 527 GPVDQ----PAPSRCVLLKNVYNQAEETEPGWQKELEEDVKVECDEKYG 571
>gi|169767236|ref|XP_001818089.1| RNA-binding protein rsd1 [Aspergillus oryzae RIB40]
gi|238484073|ref|XP_002373275.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|83765944|dbj|BAE56087.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701325|gb|EED57663.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|391870727|gb|EIT79903.1| transcriptional coactivator CAPER [Aspergillus oryzae 3.042]
Length = 568
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 197/378 (52%), Gaps = 64/378 (16%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+L+ +ERD RTIF QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFK+
Sbjct: 169 ELNEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKN 228
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNI 126
+SV A+ L GQKLLGIPII Q T+AEKNR P RLY+G++HF+I
Sbjct: 229 EDSVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDASSGNNHAAPFHRLYVGNIHFSI 288
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE+ L+ +FEPFG+++ +QL D +TGRS+GYGF+ F + A++A E++NGF+LAGR +
Sbjct: 289 TENDLQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRAI 347
Query: 187 KVGTVTD---------RNESVG---------------------GGPSNLDT--------- 207
+VG D R +S G GG SN D
Sbjct: 348 RVGLGNDKFTPDSSAQRLQSQGANQQNFQGSSFSGHGGRGIQAGGTSNFDRAGGRDSEKG 407
Query: 208 ------DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVS 261
D+ + AGV+ R LM KLA P+ +SA + + +L T
Sbjct: 408 AGASALDDTDVAGVNFNNYSRDALMRKLARTD----EPSESSADD--KQKVLRPKTETKP 461
Query: 262 SSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVCFIYSVIFL 320
+A++C +L NMFDP E +W E+ DDV EC K+G V+ +
Sbjct: 462 LPVNVNMASRCVMLRNMFDPGEEEGESWIKELEDDVRAECEEKYG----------HVVHI 511
Query: 321 KLWSYVQVNLWCRHARKQ 338
L Q +++ + R Q
Sbjct: 512 ALDPNSQGDIYLKFDRVQ 529
>gi|125532099|gb|EAY78664.1| hypothetical protein OsI_33765 [Oryza sativa Indica Group]
Length = 549
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 187/340 (55%), Gaps = 58/340 (17%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F QLS + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 189 ERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVP 248
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRG--TGGPMRLYIGSLHFNITEDM 130
+A+ L GQ LLG ++V+P++AEKN + N+ G +GG +LY+G+LH NITED
Sbjct: 249 MAIALTGQVLLGQQVMVKPSEAEKNLVQS---NVASGGIASGGARKLYVGNLHSNITEDQ 305
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKVG 189
LR +FEPFG+++ +QL F +DAK AQ LNG ++AGR +KV
Sbjct: 306 LRQVFEPFGQVELVQL---------------PFARLEDAKAAQ-SLNGQLDIAGRVIKVS 349
Query: 190 TVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEG----------------T 233
VT++ GG + D D+ E G+ L A+ R LM KL T
Sbjct: 350 AVTEQAGLQVGGATTGDLDDDEGGGLALNASSRAMLMRKLDRSGTATSITGGIGIPGVNT 409
Query: 234 GLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIA------------TQCFLLANMFDP 281
+ELP A+ + L +++ + P + T P I T+ LL NMFDP
Sbjct: 410 SVELPSASVTGAPLPTTSLIQPTIPAI--GTVPGIQIPGTQSADIGSPTEFLLLKNMFDP 467
Query: 282 ATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
A ET+P +D++I+DDV +EC+K G V +T F+Y
Sbjct: 468 AVETDPDFDLDIKDDVQDECSKFGAVNHIFVDKNTAGFVY 507
>gi|334184261|ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251465|gb|AEC06559.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 599
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 202/359 (56%), Gaps = 53/359 (14%)
Query: 7 DDLSPE---ERDARTIFCMQLSQRIRTRDLEEFFSSVGKV---------RDVRLITCNKT 54
D + PE ERD RT+F Q++ R RD+ EFFS GKV RDVR+I +
Sbjct: 198 DKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVCPFLCRFHVRDVRIIMDRIS 257
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPN------LQP 108
RR +GI Y+EF D SVP+A+ L+GQ LLG P++V+P++AEKN +T L P
Sbjct: 258 RRSRGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGP 317
Query: 109 RGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADD 168
+GG RLY+G+LH N++ED LR +FE FG ++ +Q+ D +TG KG+GF+ F +D
Sbjct: 318 Y-SGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLED 375
Query: 169 AKKAQEQLNG-FELAGRPMKVGTVTDRNE--SVGGGPSNLDTDEMERAGVDLGATGRLQL 225
A+ A LNG E+AGR +KV VTD+ E G + D D+ + G+ L A R L
Sbjct: 376 ARNAL-NLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALL 434
Query: 226 MFKL-----AEGTGLELPPA----AASALNLAQNAILNSSTPQVS----SSTAP------ 266
M KL A TGL + ++ +LA A++ S P V+ S P
Sbjct: 435 MQKLDRSGTASSTGLTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGVIPAG 494
Query: 267 --PIA--TQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
PI ++C LL NMFDP+TET +D +I++DV EEC+K G V ++V F+Y
Sbjct: 495 FDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVY 553
>gi|425770690|gb|EKV09156.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum Pd1]
gi|425772037|gb|EKV10463.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum PHI26]
Length = 556
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 137/375 (36%), Positives = 190/375 (50%), Gaps = 74/375 (19%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
S +L+ +ERD RTIF QL+ R+R +DL FF G V+D +++ + R KG+ Y+EF
Sbjct: 155 SPELNEDERDRRTIFVQQLAARLRIKDLFTFFEKAGPVKDAQIVKDRVSGRSKGVGYVEF 214
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM------RLYI 119
K+ ESV A+ L GQ LLGIPII Q T+AEKNR P T G RLY+
Sbjct: 215 KNEESVAAAIRLTGQMLLGIPIIAQLTEAEKNRQARN-----PEATAGNQHTAPFHRLYV 269
Query: 120 GSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGF 179
G++HF+ITED L +FEPFG+++ +QL D +TGRSKGY F+ F + + A+ A E++NGF
Sbjct: 270 GNVHFSITEDDLTNVFEPFGELEFVQLQKD-ETGRSKGYAFVQFANPEQARDALEKMNGF 328
Query: 180 ELAGRPMKVGTVTDR----------------NES---------------VGGGPSNLDT- 207
ELAGR ++VG D+ N+S GG +N D
Sbjct: 329 ELAGRAIRVGLGNDKFTPDAHANRPSGASSTNQSNFQGSSFSGQGGRGVQAGGSNNFDRA 388
Query: 208 --------------DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAIL 253
D+ + AGV+ R LM KLA A +++ Q +
Sbjct: 389 GGRETEKGAGASALDDTDVAGVNFNNYSRDALMRKLAR------TDDAQPSVDDRQKFL- 441
Query: 254 NSSTPQVSSSTAP---PIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNK---HGVG 307
P+ + P +A++C LL NMFDPA ET W E+ +DV EC + H V
Sbjct: 442 ---RPKTETKPLPINVNMASRCVLLRNMFDPAEETGEAWIKELEEDVRSECEEKYGHVVH 498
Query: 308 ASTVCFIYSVIFLKL 322
S I+LK
Sbjct: 499 ISLDVSSQGDIYLKF 513
>gi|367054118|ref|XP_003657437.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
gi|347004703|gb|AEO71101.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
Length = 573
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 178/326 (54%), Gaps = 55/326 (16%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+ERD RT+F QL+ R+RTR+L+EFF VG V + +++ + R KG+ Y+EFK+ ESV
Sbjct: 184 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEESV 243
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNR-AGNTLPNLQPRGTGGPM-RLYIGSLHFNITED 129
A+ L GQKLLGIP+IVQPT+AEKNR NT + P P RLY+G++HF+ITE
Sbjct: 244 AAALQLTGQKLLGIPVIVQPTEAEKNRQVRNTESSGHPNSV--PFHRLYVGNIHFSITET 301
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
L+ +FEPFG+++ +QL D D+GRS+GYGF+ F A A++A E++NGF+LAGRP++VG
Sbjct: 302 DLQNVFEPFGELEFVQLQKD-DSGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIRVG 360
Query: 190 TVTDR----------------NESVGG---------GP--SNLDT--------------- 207
D+ N+ G GP SN D
Sbjct: 361 LGNDKFTPESTANLLRGFQGQNQQYQGSAFSGAGGRGPQVSNFDRAGGRDSDKGTGASAL 420
Query: 208 DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPP 267
D+ + AGV+ R LM KLA + P + IL T
Sbjct: 421 DDTDVAGVNFNNYSRDALMRKLAR---TDEPTNGQ-----PERQILKPKTETKPMPVNVS 472
Query: 268 IATQCFLLANMFDPATETNPTWDVEI 293
+A++C +L NMFDPA + W E+
Sbjct: 473 MASRCVVLHNMFDPAEQEGEDWAKEL 498
>gi|358399615|gb|EHK48952.1| hypothetical protein TRIATDRAFT_164478, partial [Trichoderma
atroviride IMI 206040]
Length = 571
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 129/362 (35%), Positives = 183/362 (50%), Gaps = 57/362 (15%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTR+L+EFF VG V + +++ + R KG+ Y+EFK
Sbjct: 176 LTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISGRSKGVGYVEFKSE 235
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNIT 127
++V A+ L GQKLLGIP+IVQ T+AEKNR + P RLY+G++HFN+T
Sbjct: 236 DAVQQALQLTGQKLLGIPVIVQHTEAEKNRQARNPDSTSGHPNSIPFHRLYVGNIHFNVT 295
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E L+ +FEPFG+++ +QL D D GRS+GYGF+ F A A++A E++NGF+LAGRP++
Sbjct: 296 EQDLQAVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIR 354
Query: 188 VGTVTD--------------------------------------------RNESVGGGPS 203
VG D R+ GG S
Sbjct: 355 VGLGNDKFTPESTANLMHKFSGNNQGGFQGSAFSGAGGRGQQSTFDRAGGRDSEKTGGAS 414
Query: 204 NLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSS 263
LD ++ AGV+ R LM KLA A + N + IL T
Sbjct: 415 ALDDTDV--AGVNFNNYSRDALMRKLAR------TDEAPTNGNEERQQILKPKTETKPLP 466
Query: 264 TAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNK---HGVGASTVCFIYSVIFL 320
+A++C +L NMFD E W E+ D+V +E + H V S I+L
Sbjct: 467 VNVNMASRCVVLHNMFDATEEEGDDWVKELEDEVRQEAEQRYGHVVHISVDPNSKGDIYL 526
Query: 321 KL 322
K
Sbjct: 527 KF 528
>gi|121700823|ref|XP_001268676.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
gi|119396819|gb|EAW07250.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
Length = 566
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 196/383 (51%), Gaps = 70/383 (18%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
S +L+ +ERD RTIF QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EF
Sbjct: 165 SPELNEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 224
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHF 124
K ESV A+ L GQKLLGIPII Q T+AEKNR P RLY+G++HF
Sbjct: 225 KSEESVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGHNHAAPFHRLYVGNIHF 284
Query: 125 NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
+ITE+ L+ +FEPFG+++ +QL D +TGRS+GYGF+ F + A++A E++NGF+LAGR
Sbjct: 285 SITENDLQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKMNGFDLAGR 343
Query: 185 PMKVGTVTD---------RNESVG---------------------GGPSNLDT------- 207
++VG D R++ G GG S+ D
Sbjct: 344 AIRVGLGNDKFTPDSSAQRSQGHGANQQNFQGSSFSGQGGRGIQAGGTSSFDRAGGRDSE 403
Query: 208 --------DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQ 259
D+ + AGV+ R LM KLA T PAA L + P+
Sbjct: 404 KGAGASALDDTDVAGVNFNNYSRDALMRKLAR-TDEPAEPAADDKQKLLR--------PK 454
Query: 260 VSSSTAP---PIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVCFIY 315
P +A++C LL NMFDP+ E W ++ DDV EC K+G
Sbjct: 455 TEVKPLPVNVNMASRCVLLRNMFDPSEEEGEAWIKDLEDDVRAECEEKYG---------- 504
Query: 316 SVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 505 HVVHIALDPNSQGDIYLKFDRVQ 527
>gi|145231104|ref|XP_001389816.1| RNA-binding protein rsd1 [Aspergillus niger CBS 513.88]
gi|134055944|emb|CAK37421.1| unnamed protein product [Aspergillus niger]
gi|350638781|gb|EHA27137.1| hypothetical protein ASPNIDRAFT_46267 [Aspergillus niger ATCC 1015]
Length = 570
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 135/374 (36%), Positives = 190/374 (50%), Gaps = 64/374 (17%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+ERD RTIF QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFK +SV
Sbjct: 175 DERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKSEDSV 234
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNITEDM 130
A+ L GQKLLGIPII Q T+AEKNR P RLY+G++HF+ITE
Sbjct: 235 APAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGNNHAAPFHRLYVGNIHFSITESD 294
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
L+ +FEPFG+++ +QL D +TGRS+GYGF+ F + A++A E++NGF+LAGR ++VG
Sbjct: 295 LQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRAIRVGL 353
Query: 191 VTD---------RNESVG---------------------GGPSNLDT------------- 207
D R +S G GG SN D
Sbjct: 354 GNDKFTPDSNAQRMQSQGANQHNFQGSLFSGHGGRGVQAGGTSNFDRAGGRDSEKGAGAS 413
Query: 208 --DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTA 265
D+ + AGV+ R LM KLA T PAA Q +L T
Sbjct: 414 ALDDTDVAGVNFNNYSRDALMRKLAR-TDEPSEPAADD-----QQKVLRPKTEAKPLPVN 467
Query: 266 PPIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVCFIYSVIFLKLWS 324
+A++C +L NMFDP E W E+ DDV EC +K+G V+ + L
Sbjct: 468 VNMASRCVMLRNMFDPNEEEGEAWIKELEDDVRAECEDKYG----------HVVHIALDP 517
Query: 325 YVQVNLWCRHARKQ 338
Q +++ + R Q
Sbjct: 518 NSQGDIYLKFDRVQ 531
>gi|403412344|emb|CCL99044.1| predicted protein [Fibroporia radiculosa]
Length = 599
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/351 (37%), Positives = 194/351 (55%), Gaps = 54/351 (15%)
Query: 3 PAYS----DDLSPEE-----RDARTIFCMQLSQRIRTRDLEEFFSSV---GKVRDVRLIT 50
P+Y D L+P+E +AR++F QL+ R+ RDL FF G V D R++T
Sbjct: 245 PSYEAPLDDMLNPDEPREDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGSVMDSRIVT 304
Query: 51 CNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNR--AGNTLPNLQP 108
+RR KGI Y+EF+ E V A+GL+G ++G+PI +Q T+AE+NR G+ NL P
Sbjct: 305 DRISRRSKGIGYVEFRSVELVDKALGLSGTVVMGLPIQIQHTEAERNRLHPGDGNLNLPP 364
Query: 109 RGTGGP---MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHS 165
G P M+LY+GSLHFN+TE ++ +FEPFG+++ + L DP TGRSKGY F+ +
Sbjct: 365 -GVSAPHGGMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKR 423
Query: 166 ADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQL 225
A+DA+ A EQ+ GFELAGR ++V TV ++ + +LD E G +L A R L
Sbjct: 424 AEDARMALEQMEGFELAGRTLRVNTVHEKGTTKYAQQDSLD----EAGGGNLNAASRQAL 479
Query: 226 MFKLA--EGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT 283
M KLA + ++LPP + P + S + ++ LL NMF+P
Sbjct: 480 MQKLARTDQPAVKLPPV---------------TKPNIPQS----MQSRSVLLKNMFNPEE 520
Query: 284 ETNPTWDVEIRDDVIEEC-NKHGVGASTVCFIYSVIFLKLWSYVQVNLWCR 333
ET WD ++ +DV EC +K+G V F+K+ Q ++ +
Sbjct: 521 ETERDWDKDLAEDVKGECEDKYG----------KVEFIKVERESQGEIYVK 561
>gi|358370208|dbj|GAA86820.1| RNA splicing factor (Pad-1) [Aspergillus kawachii IFO 4308]
Length = 571
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 190/374 (50%), Gaps = 64/374 (17%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+ERD RTIF QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFK ++V
Sbjct: 176 DERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKSEDAV 235
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNITEDM 130
A+ L GQKLLGIPII Q T+AEKNR P RLY+G++HF+ITE
Sbjct: 236 APAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGNNHAAPFHRLYVGNIHFSITESD 295
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
L+ +FEPFG+++ +QL D +TGRS+GYGF+ F + A++A E++NGF+LAGR ++VG
Sbjct: 296 LQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRAIRVGL 354
Query: 191 VTD---------RNESVG---------------------GGPSNLDT------------- 207
D R +S G GG SN D
Sbjct: 355 GNDKFTPDSNAQRMQSQGANQHNFQGSLFSGHGGRGVQAGGTSNFDRAGGRDSEKGAGAS 414
Query: 208 --DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTA 265
D+ + AGV+ R LM KLA T PAA Q +L T
Sbjct: 415 ALDDTDVAGVNFNNYSRDALMRKLAR-TDEPAEPAADD-----QQKVLRPKTEAKPLPVN 468
Query: 266 PPIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVCFIYSVIFLKLWS 324
+A++C +L NMFDP E W E+ DDV EC +K+G V+ + L
Sbjct: 469 VNMASRCVMLRNMFDPNEEEGEAWIKELEDDVRAECEDKYG----------HVVHIALDP 518
Query: 325 YVQVNLWCRHARKQ 338
Q +++ + R Q
Sbjct: 519 NSQGDIYLKFDRVQ 532
>gi|367034680|ref|XP_003666622.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
gi|347013895|gb|AEO61377.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
Length = 575
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/329 (38%), Positives = 180/329 (54%), Gaps = 54/329 (16%)
Query: 8 DLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
D SP +ERD RT+F QL+ R+RTR+L+EFF VG V + +++ + R KG+ Y+EF
Sbjct: 183 DPSPTGDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEF 242
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNR-AGNTLPNLQPRGTGGPM-RLYIGSLH 123
K+ ESV A+ L GQKLLGIP+IVQPT+AEKNR A N+ + P P RLY+G++H
Sbjct: 243 KNEESVAAALQLTGQKLLGIPVIVQPTEAEKNRQARNSESSGHPNSI--PFHRLYVGNIH 300
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
F+ITE L+ +FEPFG+++ +QL D D+GRS+GYGF+ F A A++A E++NGF+LAG
Sbjct: 301 FSITETDLQNVFEPFGELEFVQLQKD-DSGRSRGYGFVQFRDASQAREALEKMNGFDLAG 359
Query: 184 RPMKVGTVTDR----------------NE----SVGGG----PSNLDT------------ 207
RP++VG D+ N+ S GG SN D
Sbjct: 360 RPIRVGLGNDKFTPESTANLLRGFQGQNQGSAFSGAGGRGLQASNFDRAGGRDSDKGTAA 419
Query: 208 ---DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSST 264
D+ + AGV+ R LM KLA + + IL T
Sbjct: 420 SALDDTDVAGVNFNNYSRDALMRKLAR--------TDEPSTGQPERQILKPKTETQPLPV 471
Query: 265 APPIATQCFLLANMFDPATETNPTWDVEI 293
+A++C +L NMFDP + W E+
Sbjct: 472 NVSMASRCVVLHNMFDPTEQEGEGWIKEL 500
>gi|171690010|ref|XP_001909937.1| hypothetical protein [Podospora anserina S mat+]
gi|170944960|emb|CAP71071.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 183/337 (54%), Gaps = 69/337 (20%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L+EFF VG V + +++ + R KG+ Y+EFK+
Sbjct: 171 LTEDERDRRTVFVQQLAARLRTKELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNE 230
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNR------AGNTLPNLQPRGTGGPMRLYIGSL 122
+SV A+ L GQKLLGIP+IVQ T+AEKNR A PN P RLY+G++
Sbjct: 231 DSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRNPDATGNHPNSIPF-----HRLYVGNI 285
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
HF+ITE L+ +FEPFG+++ +QL D DTGRS+GYGF+ F A A++A E++NGF+LA
Sbjct: 286 HFSITEQDLQNVFEPFGELEFVQLQKD-DTGRSRGYGFVQFRDATQAREALEKMNGFDLA 344
Query: 183 GRPMKVGTVTDR-------------------------NESVGGGP--SNLDT-------- 207
GRP++VG D+ + + G GP SN D
Sbjct: 345 GRPIRVGLGNDKFTPESTANLLQRFQGQNQQFQGSSFSGAGGRGPPTSNFDRAGARDNEK 404
Query: 208 -------DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQV 260
D+ + AGV+ R LM KLA + P +A S +A+ P+
Sbjct: 405 GTGASALDDTDVAGVNFNNYSRDALMRKLAR---TDEPISAPSDRQVAK--------PKT 453
Query: 261 SSSTAPPI----ATQCFLLANMFDPATETNPTWDVEI 293
PI A++C +L NMFDPA + W E+
Sbjct: 454 EIKPNLPINVNMASRCVVLRNMFDPAEQEGEDWAKEL 490
>gi|345563952|gb|EGX46935.1| hypothetical protein AOL_s00097g361 [Arthrobotrys oligospora ATCC
24927]
Length = 546
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/350 (36%), Positives = 183/350 (52%), Gaps = 74/350 (21%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFK+
Sbjct: 156 LTEDERDRRTVFVQQLAARLRTKELIAFFEKVGGVKEAQIVKDRVSGRSKGVGYVEFKEA 215
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGP-------------M 115
ESVP A+ L GQ+LLGIPIIVQ T+AEKNR Q R GG
Sbjct: 216 ESVPKAIALTGQRLLGIPIIVQLTEAEKNR--------QARAEGGQHNRDEDHRRTIPFH 267
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
RLY+G++HF+ITE+ L+ +F PFG ++ +QL + ++GRS+GYGF+ + ++AK+A E+
Sbjct: 268 RLYVGNIHFSITENELQQVFAPFGDLEFVQLQKE-ESGRSRGYGFVQYRDPNNAKEALER 326
Query: 176 LNGFELAGRPMKVGTVTDR------------------------------NESVGGGPSNL 205
+NGF+L GR ++VG D+ N + G S L
Sbjct: 327 MNGFDLGGRLIRVGLGNDKFTPESTAQMLQRFSNGQQAYEGRQRHNQIQNINTSGAASAL 386
Query: 206 DTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTA 265
D ++ AGV+ R LM KLA +E P QN N Q
Sbjct: 387 DDADV--AGVNFNNFSRDALMRKLAR---VEEPVH-------EQNGETNGEQKQRRQIAP 434
Query: 266 PP---------IATQCFLLANMFDPATETNPTWDVEIRDDVIEECN-KHG 305
PP +A++C ++ NMFDP E W ++ DDV EC K+G
Sbjct: 435 PPKPPVATNSTVASRCVVVKNMFDPTQEEGDAWVKDLEDDVKAECEAKYG 484
>gi|154322639|ref|XP_001560634.1| hypothetical protein BC1G_00662 [Botryotinia fuckeliana B05.10]
gi|347837181|emb|CCD51753.1| hypothetical protein [Botryotinia fuckeliana]
Length = 570
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 196/390 (50%), Gaps = 87/390 (22%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
LS +ERD RT+F QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFK+
Sbjct: 169 LSEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNE 228
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNR------AGNTLPNLQPRGTGGPMRLYIGSL 122
ESVP A+ L GQ+LLGIPII Q T+AEKNR A + PN P RLY+G++
Sbjct: 229 ESVPAAIQLTGQRLLGIPIIAQLTEAEKNRQVRNPEATTSNPNQIPF-----HRLYVGNI 283
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
HF+ITE L+ +FEPFG+++ +QL + + GRS+GYGF+ F + A++A E++NGF+LA
Sbjct: 284 HFSITESDLQNVFEPFGELEFVQLQKE-EQGRSRGYGFVQFRDPNQAREALEKMNGFDLA 342
Query: 183 GRPMKVGTVTDR------------------------------------------------ 194
GRP++VG D+
Sbjct: 343 GRPIRVGLGNDKFTPESTASLLQRFHGQSHQQQFQGSAFSGAGGRGPTAAGGSNFDRAGG 402
Query: 195 --NESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAI 252
N+ GG S LD ++ GV+ R LM KLA + A N + +
Sbjct: 403 RDNDKGAGGASALDDTDV--GGVNFNNYSRDALMRKLARTDDTTV------AANHERREV 454
Query: 253 LNSSTPQVSSSTAP---PIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGA 308
S P+ + P +A++C +L NMFDP E W+ E+ DDV E K+G
Sbjct: 455 ---SKPKTETKALPVNVNMASRCVVLKNMFDPTEEDGENWEKELEDDVRAEAEEKYG--- 508
Query: 309 STVCFIYSVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 509 -------HVVHIALDPNSQGDIYLKFDRVQ 531
>gi|403175151|ref|XP_003889057.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171476|gb|EHS64385.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/352 (37%), Positives = 183/352 (51%), Gaps = 67/352 (19%)
Query: 2 RPAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSS-VGKVRDVRLITCNKTRRFKGI 60
R + S L+ EE + R++F QLS R+ R+L +FF GKVRD RLIT +RR KG+
Sbjct: 309 RRSSSPHLTEEEHEMRSVFVSQLSARVGDRELFQFFEQQAGKVRDARLITDRISRRSKGV 368
Query: 61 AYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAG--NTLPNLQP---------- 108
Y+EF++ ESV A+ L G KLLG+P++VQ T+AEKNR NT PN+ P
Sbjct: 369 GYVEFRELESVQKALALTGTKLLGLPVMVQYTEAEKNRQAMANTQPNVPPGFVATAPPPP 428
Query: 109 ----------RGTG-----GPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTG 153
RG G RLY+GSL+FN+T+D +R +F+PFG I+ + L D TG
Sbjct: 429 VPRPYVAPKARGPGPNDPNSYARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITG 488
Query: 154 RSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV----------------GTVTDRNES 197
+SKGY F+ F + DAK A E++NGF+LAGR ++V G +
Sbjct: 489 KSKGYAFVQFKNMHDAKNAMEKMNGFQLAGRALRVEIKAQPPAALLNATAPGVANPVIVT 548
Query: 198 VGGG------PSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNA 251
GG PS + + G +L R++LM KLA E P N+
Sbjct: 549 PSGGNFTAPAPSTFEERLEDPIGGNLNQISRVELMHKLAR---TEQP------TNVPVTD 599
Query: 252 ILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNK 303
+ + P +S + LL NMF+P ET WD+E+RDDV EC +
Sbjct: 600 MFRPNIPTATS--------RSVLLKNMFNPEEETEQGWDIELRDDVKGECEE 643
>gi|388852481|emb|CCF53883.1| related to RNA-binding region containing protein 2 [Ustilago
hordei]
Length = 678
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 187/367 (50%), Gaps = 79/367 (21%)
Query: 10 SPE--ERDARTIFCMQLSQRIRTRDLEEFFS---SVGKVRDVRLITCNKTRRFKGIAYIE 64
SPE + + R++FC QLS R+ RDL EFF G V+DVR++ TRR KG+ Y+E
Sbjct: 265 SPEIDDYEERSVFCAQLSARLSQRDLGEFFEDHLGEGAVQDVRIVMDRLTRRSKGVGYVE 324
Query: 65 FKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKN------------RAGNT----LPNLQP 108
F E VP A+ L+G+ L GIPIIVQ T A +N R G T +P L P
Sbjct: 325 FAARELVPKAIELSGKDLFGIPIIVQRTDAPRNGPAYAGPGDASARNGLTPHPAVPQLDP 384
Query: 109 R------------GTGGPM------------------------RLYIGSLHFNITEDMLR 132
R G P+ RLY+GSLHF++T++ ++
Sbjct: 385 RVLANAPLPMQYHTAGAPIHMNVAPPQAPRAPRPGPNMPNTEARLYVGSLHFSLTDENVK 444
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
+FEPFG+I+ + L +P TG+SKG+ FI F A+DAKKA EQ+NGFELAGR ++VG V
Sbjct: 445 AVFEPFGEIEYVDLHREPGTGKSKGFCFIQFKHAEDAKKALEQMNGFELAGRAIRVGNVN 504
Query: 193 DRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL--NLAQN 250
+ G SN E G QL +G G L P +AL LA+N
Sbjct: 505 AKGTGSAGSYSNGSCPGSE------GGGHLPQLTSAFDDGGGAGLNPERRAALMEKLARN 558
Query: 251 AILNSSTPQVSSSTA----------PPIATQCFLLANMFDPATETNPTWDVEIRDDVIEE 300
N +P +S +T+ P + LL NMF+PA ET WD ++ +DV +E
Sbjct: 559 ---NDPSPTISEATSAMIQERPAGIPESTSTSLLLKNMFNPAEETEQGWDKDLAEDVKDE 615
Query: 301 CN-KHGV 306
C+ K+G
Sbjct: 616 CHAKYGA 622
>gi|384252120|gb|EIE25597.1| splicing factor, CC1-like protein [Coccomyxa subellipsoidea C-169]
Length = 497
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/341 (38%), Positives = 178/341 (52%), Gaps = 35/341 (10%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+L +RD RT+F L + RDL EFFS G + DV++I TR+ KG AYIE+ +
Sbjct: 117 ELKELDRDIRTVFAYNLPLKAEERDLFEFFSKAGPIEDVKIIMDRNTRKSKGFAYIEYTN 176
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRA-----GNTLPNLQPRGTG----GPMRLY 118
+ AM L GQ L+G ++V+ ++AEKN A LQ G GP +LY
Sbjct: 177 KADIVTAMALTGQILMGQAVMVKSSEAEKNLAWEAAQAQNASMLQMSTIGNAGTGPCKLY 236
Query: 119 IGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
IG+LH NI E L+ +FE FG ++ I L DP TGRS+GYGF+ + + DA KA +QL+G
Sbjct: 237 IGNLHPNIQEQDLKQVFEAFGAVEYITLQKDP-TGRSQGYGFVQYQTTPDATKAMQQLDG 295
Query: 179 FELAGRPMKVGTV------TDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEG 232
++AG + V T + G +LD E E G+ L A R LM +L+
Sbjct: 296 LDIAGSQISVKIAPLTPAETAAAAAAAAG-LDLDDAEGEHGGLKLTANARAALMQRLSGP 354
Query: 233 TGLEL-----------PPAAASALNLAQNAILNS-STPQVSSSTAPPIATQCFLLANMFD 280
T L + PPA A + +A + + Q + PI TQC LL NMFD
Sbjct: 355 TDLGVLIADALGPLPGPPAMVPAGTVVMSAGAQALAMEQGILGPSSPIPTQCLLLKNMFD 414
Query: 281 PATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
P ET P WD EI DV EEC+K+G V ++ F+Y
Sbjct: 415 PKEETEPDWDQEIATDVTEECSKYGPVSHTHVDKNSKGFVY 455
>gi|168061001|ref|XP_001782480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666033|gb|EDQ52699.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 363
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/301 (40%), Positives = 167/301 (55%), Gaps = 51/301 (16%)
Query: 54 TRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRG--- 110
+RR KG+ YIEF D SVP+A+ L+GQ LL P++V+P++AEKN +T G
Sbjct: 5 SRRSKGVGYIEFYDAMSVPMAIALSGQLLLNQPVMVKPSEAEKNLVQSTTAVPGVTGGFI 64
Query: 111 ---TGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSAD 167
+GG RLY+G+LHFN+TED LR +FEPFG ++ +QL D +TG+SKGYGF+ + +
Sbjct: 65 GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPSDIETGQSKGYGFVQYARLE 124
Query: 168 DAKKAQEQLNGFELAGRPMKVGTVTDR--NESVGGGPSNLDTDEMERAGVDLGATGRLQL 225
DA+ AQ+ LNG ELAGRP+KV V+D+ E +G P LD D E G+ L A R L
Sbjct: 125 DARAAQQNLNGLELAGRPIKVSAVSDQIGMEDMGVHPGELDDD--EGGGLSLNARSRALL 182
Query: 226 MFKL------AEGTGLELPPAAASALNLAQNAILNSSTPQVSSS---------------- 263
M KL TG LP A AL L A+ TP V
Sbjct: 183 MQKLDRSGSGTSNTGATLPAAPVPALGLLGTAVPTGVTPLVRPPFFVQNPLVLAGAATGL 242
Query: 264 ----------TAPPIA---------TQCFLLANMFDPATETNPTWDVEIRDDVIEECNKH 304
PP+ ++ LL NMFDP+TE++P +D++I++DV +EC+K
Sbjct: 243 GAAALGTPGLVMPPVVGAVDAIGQPSEYLLLKNMFDPSTESDPEFDLDIKEDVQDECSKF 302
Query: 305 G 305
G
Sbjct: 303 G 303
>gi|403178034|ref|XP_003336468.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173310|gb|EFP92049.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/352 (37%), Positives = 183/352 (51%), Gaps = 67/352 (19%)
Query: 2 RPAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSS-VGKVRDVRLITCNKTRRFKGI 60
R + S L+ EE + R++F QLS R+ R+L +FF GKVRD RLIT +RR KG+
Sbjct: 309 RRSSSPHLTEEEHEMRSVFVSQLSARVGDRELFQFFEQQAGKVRDARLITDRISRRSKGV 368
Query: 61 AYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAG--NTLPNLQP---------- 108
Y+EF++ ESV A+ L G KLLG+P++VQ T+AEKNR NT PN+ P
Sbjct: 369 GYVEFRELESVQKALALTGTKLLGLPVMVQYTEAEKNRQAMANTQPNVPPGFVATAPPPP 428
Query: 109 ----------RGTG-----GPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTG 153
RG G RLY+GSL+FN+T+D +R +F+PFG I+ + L D TG
Sbjct: 429 VPRPYVTPKARGPGPNDPNSYARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITG 488
Query: 154 RSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV----------------GTVTDRNES 197
+SKGY F+ F + DAK A E++NGF+LAGR ++V G +
Sbjct: 489 KSKGYAFVQFKNMHDAKNAMEKMNGFQLAGRALRVEIKAQPPAALLNATAPGVANPVIVT 548
Query: 198 VGGG------PSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNA 251
GG PS + + G +L R++LM KLA E P N+
Sbjct: 549 PSGGNFTAPAPSTFEERLEDPIGGNLNQISRVELMHKLAR---TEQP------TNVPVTD 599
Query: 252 ILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNK 303
+ + P +S + LL NMF+P ET WD+E+RDDV EC +
Sbjct: 600 MFRPNIPTATS--------RSVLLKNMFNPEEETEQGWDIELRDDVKGECEE 643
>gi|168048203|ref|XP_001776557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672148|gb|EDQ58690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 372
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 126/306 (41%), Positives = 169/306 (55%), Gaps = 59/306 (19%)
Query: 54 TRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNT--LPNLQPR-- 109
+RR KG+ YIEF D SVP+A+ L+GQ LL P++V+P++AEKN +T +P +
Sbjct: 5 SRRSKGVGYIEFYDAMSVPMAIALSGQLLLNQPVMVKPSEAEKNLVQSTTVVPGVAGSFI 64
Query: 110 --GTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSAD 167
+GG RLY+G+LHFN+TED LR +FEPFG ++ +QL D +TG+SKGYGF+ + +
Sbjct: 65 GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPSDIETGQSKGYGFVQYARLE 124
Query: 168 DAKKAQEQLNGFELAGRPMKVGTVTDR--NESVGGGPSNLDTDEMERAGVDLGATGRLQL 225
DA+ AQ+ LNG ELAGRP+KV V+D+ E +G P LD DE G+ L A R L
Sbjct: 125 DARAAQQNLNGLELAGRPIKVSAVSDQIGMEDMGVHPGELDDDE--GGGLSLNARSRALL 182
Query: 226 MFKL-AEGTGLE----LPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQ--------- 271
M KL GTG LP A A L L A+ P V+ PP Q
Sbjct: 183 MQKLDRSGTGTSVASTLPAAPAPTLGLLGTAV----PPTVTPLARPPFFVQNPLVLAGAA 238
Query: 272 -------------------------------CFLLANMFDPATETNPTWDVEIRDDVIEE 300
LL NMFDP+TE++P +D++I+DDV EE
Sbjct: 239 PGLGAAAALSSPALAMPSLTGAVDAIGQPSEYLLLKNMFDPSTESDPDFDMDIKDDVQEE 298
Query: 301 CNKHGV 306
C+K GV
Sbjct: 299 CSKFGV 304
>gi|336389603|gb|EGO30746.1| hypothetical protein SERLADRAFT_455043 [Serpula lacrymans var.
lacrymans S7.9]
Length = 583
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 124/319 (38%), Positives = 179/319 (56%), Gaps = 39/319 (12%)
Query: 3 PAYS--DDLSPEE-----RDARTIFCMQLSQRIRTRDLEEFFSSV---GKVRDVRLITCN 52
P Y DD +PEE +AR++F QL+ R+ RDL FF G V D R++T
Sbjct: 232 PTYDTPDDYNPEEPKEDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDSRIVTDR 291
Query: 53 KTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNR--AGNTLPNLQPRG 110
+RR KGI Y+EF+ + V A+ L+G ++G+P++VQ T++E+N+ G+ NL P G
Sbjct: 292 LSRRSKGIGYVEFRSIDMVEKAISLSGTVVMGLPVMVQLTESERNKLHPGDGNLNLPP-G 350
Query: 111 TGGP---MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSAD 167
P M+LY+GSLHFN+TE ++ +FEPFG+++ + L DP TGRSKGY F+ + A+
Sbjct: 351 VSAPHGAMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAE 410
Query: 168 DAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMF 227
DA+ A EQ+ GFELAGR ++V TV ++ + LD E G +L A R LM
Sbjct: 411 DARMALEQMEGFELAGRTLRVNTVHEKGTARYAQQDTLD----EAGGGNLNAASRQALMQ 466
Query: 228 KLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNP 287
KLA + PP + PQ + ++ LL NMFDP ET
Sbjct: 467 KLARIEPIPKPPTNNKP-----------TIPQA-------MQSRSVLLKNMFDPEEETER 508
Query: 288 TWDVEIRDDVIEEC-NKHG 305
WD ++ +DV EC +K+G
Sbjct: 509 DWDKDLAEDVKGECEDKYG 527
>gi|156064869|ref|XP_001598356.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980]
gi|154691304|gb|EDN91042.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 570
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 196/390 (50%), Gaps = 87/390 (22%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EFK+
Sbjct: 169 LTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNE 228
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNR------AGNTLPNLQPRGTGGPMRLYIGSL 122
ESVP A+ L GQ+LLGIPII Q T+AEKNR A + PN P RLY+G++
Sbjct: 229 ESVPAAIQLTGQRLLGIPIIAQLTEAEKNRQVRNPEATTSNPNQIPF-----HRLYVGNI 283
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
HF+ITE L+ +FEPFG+++ +QL + + GRS+GYGF+ F + A++A E++NGF+LA
Sbjct: 284 HFSITEADLQNVFEPFGELEFVQLQKE-EQGRSRGYGFVQFRDPNQAREALEKMNGFDLA 342
Query: 183 GRPMKVGTVTDR------------------------------------------------ 194
GRP++VG D+
Sbjct: 343 GRPIRVGLGNDKFTPESTASLLQRFHGQSHQQQFQGSAFSGAGGRGPTAAGGSNFDRAGG 402
Query: 195 --NESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAI 252
N+ GG S LD ++ GV+ R LM KLA +A N + +
Sbjct: 403 RDNDKGAGGASALDDTDV--GGVNFNNYSRDALMRKLAR------TDDTTTAANHERREV 454
Query: 253 LNSSTPQVSSSTAP---PIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGA 308
S P+ + P +A++C +L NMFDP E W+ E+ DDV E K+G
Sbjct: 455 ---SKPKTETKALPVNVNMASRCVVLKNMFDPTEEDGENWEKELEDDVRAEAEEKYG--- 508
Query: 309 STVCFIYSVIFLKLWSYVQVNLWCRHARKQ 338
V+ + L Q +++ + R Q
Sbjct: 509 -------HVVHIALDPNSQGDIYLKFDRVQ 531
>gi|336376609|gb|EGO04944.1| hypothetical protein SERLA73DRAFT_174031 [Serpula lacrymans var.
lacrymans S7.3]
Length = 583
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 124/319 (38%), Positives = 179/319 (56%), Gaps = 39/319 (12%)
Query: 3 PAYS--DDLSPEE-----RDARTIFCMQLSQRIRTRDLEEFFSSV---GKVRDVRLITCN 52
P Y DD +PEE +AR++F QL+ R+ RDL FF G V D R++T
Sbjct: 232 PTYDTPDDYNPEEPKEDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDSRIVTDR 291
Query: 53 KTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNR--AGNTLPNLQPRG 110
+RR KGI Y+EF+ + V A+ L+G ++G+P++VQ T++E+N+ G+ NL P G
Sbjct: 292 LSRRSKGIGYVEFRSIDMVEKAISLSGTVVMGLPVMVQLTESERNKLHPGDGNLNLPP-G 350
Query: 111 TGGP---MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSAD 167
P M+LY+GSLHFN+TE ++ +FEPFG+++ + L DP TGRSKGY F+ + A+
Sbjct: 351 VSAPHGAMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAE 410
Query: 168 DAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMF 227
DA+ A EQ+ GFELAGR ++V TV ++ + LD E G +L A R LM
Sbjct: 411 DARMALEQMEGFELAGRTLRVNTVHEKGTARYAQQDTLD----EAGGGNLNAASRQALMQ 466
Query: 228 KLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNP 287
KLA + PP + PQ + ++ LL NMFDP ET
Sbjct: 467 KLARIEPIPKPPTNNKP-----------TIPQA-------MQSRSVLLKNMFDPEEETER 508
Query: 288 TWDVEIRDDVIEEC-NKHG 305
WD ++ +DV EC +K+G
Sbjct: 509 DWDKDLAEDVKGECEDKYG 527
>gi|440632886|gb|ELR02805.1| hypothetical protein GMDG_05742 [Geomyces destructans 20631-21]
Length = 575
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/379 (35%), Positives = 188/379 (49%), Gaps = 81/379 (21%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+R+++L FF VG V++ +++ + R KG+ Y+EFK+
Sbjct: 170 LTEDERDKRTVFVQQLAARLRSKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNE 229
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTL------PNLQPRGTGGPMRLYIGSL 122
ESV A+ L GQKLLGIPII Q T+AEKNR T PN P RLY+G++
Sbjct: 230 ESVAAAIQLTGQKLLGIPIIAQLTEAEKNRQVRTAEPASNNPNQIPF-----HRLYVGNI 284
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
HF+ITE L+ +FEPFG+++ +QL + D GRS+GYGF+ F A++A E++NGF+LA
Sbjct: 285 HFSITEGDLQNVFEPFGELEFVQLQKE-DQGRSRGYGFVQFRDPHQAREALEKMNGFDLA 343
Query: 183 GRPMKVGTVTDR------------------------------------------------ 194
GRP++VG D+
Sbjct: 344 GRPIRVGLGNDKFTPESTASLLQRFQGQSHQQQFQGSAFSGAGGRGPQASGGGGGAFDRA 403
Query: 195 ----NESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQN 250
N+ GG S LD ++ GV+ R LM KLA PA A+ +
Sbjct: 404 GGRDNDKGAGGASALDDTDV--GGVNFNNYSRDALMRKLARTD----EPAPATNGRDDRR 457
Query: 251 AILNSSTPQVSSSTAPPI----ATQCFLLANMFDPATETNPTWDVEIRDDV---IEECNK 303
+ T PPI A++C +L NMFDPA ET W+ E+ DDV EE
Sbjct: 458 EVAKPRT----EVKPPPINVNTASRCVVLRNMFDPAEETGENWEKELEDDVRAEAEEKYG 513
Query: 304 HGVGASTVCFIYSVIFLKL 322
H V S I+LK
Sbjct: 514 HVVHISLDPNSQGDIYLKF 532
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/309 (39%), Positives = 184/309 (59%), Gaps = 31/309 (10%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFS-SVGK--VRDVRLITCNKTRRFKGIAY 62
+D+ SP++ +AR++F QL+ R+ RDL FF +G+ V D R++T +RR KGI Y
Sbjct: 282 NDEPSPDDSEARSVFVSQLAARLTARDLGYFFEDKLGENTVMDSRIVTDRISRRSKGIGY 341
Query: 63 IEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNR--AGNTLPNLQPRGTGGP---MRL 117
+EF+ E V A+ L+G ++G+PI +Q T+AE+NR G+ NL P G P M+L
Sbjct: 342 VEFRSVELVDKAIALSGTVVMGLPIQIQHTEAERNRLHPGDGNLNLPP-GVSAPHGGMQL 400
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
Y+GSLHFN++E ++ +FEPFG+++ + L DP TGRSKGY F+ + A+DAK A EQ++
Sbjct: 401 YVGSLHFNLSESDIKQVFEPFGELEFVDLHRDPVTGRSKGYAFVQYKRAEDAKMALEQMD 460
Query: 178 GFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLEL 237
GFELAGR ++V TV ++ + +LD E G +L A R LM KLA +
Sbjct: 461 GFELAGRTLRVNTVHEKGSARYTQQDSLD----EAGGGNLNAASRQALMQKLA-----RI 511
Query: 238 PPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDV 297
P A +A+ I PQ + ++ L+ NMF+P ET WD ++ +DV
Sbjct: 512 DPTPAKMEPIARPNI-----PQT-------MQSRSVLMKNMFNPEEETERDWDKDLAEDV 559
Query: 298 IEEC-NKHG 305
EC +K+G
Sbjct: 560 KGECESKYG 568
>gi|409051610|gb|EKM61086.1| hypothetical protein PHACADRAFT_247456 [Phanerochaete carnosa
HHB-10118-sp]
Length = 584
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/333 (39%), Positives = 184/333 (55%), Gaps = 42/333 (12%)
Query: 11 PEERD--ARTIFCMQLSQRIRTRDLEEFFSSV---GKVRDVRLITCNKTRRFKGIAYIEF 65
P E D AR++F QL+ R+ RDL FF G V D R++T +RR KGI Y+EF
Sbjct: 246 PREDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGAVMDSRIVTDRISRRSKGIGYVEF 305
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNR--AGNTLPNLQP--RGTGGPMRLYIGS 121
+ E V A+GL+G ++G+PI VQ T+AE+NR AG++L +L P G M+LY+GS
Sbjct: 306 RTIELVEKAIGLSGTIVMGLPIQVQHTEAERNRTHAGDSL-HLPPGVSSHHGGMQLYVGS 364
Query: 122 LHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFEL 181
LHFN+TE +R +FEPFG+++ + L DP TGRSKGY F+ + +DAK A EQ+ GFEL
Sbjct: 365 LHFNLTESDIRQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRGEDAKMALEQMEGFEL 424
Query: 182 AGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAA 241
AGR ++V TV ++ +LD + G +L A R LM KLA PAA
Sbjct: 425 AGRTLRVNTVHEKGNVRYTPQESLD----DTGGGNLNAASRQALMQKLARTD----QPAA 476
Query: 242 ASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC 301
I+ + PQ + ++ LL NMF+P ET WD E+ DDV E
Sbjct: 477 RP------QPIMKPNIPQS-------MQSKSVLLKNMFNPEEETERDWDKELADDVKNEV 523
Query: 302 -NKHGVGASTVCFIYSVIFLKLWSYVQVNLWCR 333
+K+G V F+K+ Q ++ +
Sbjct: 524 EDKYG----------DVNFIKVERESQGEIYVK 546
>gi|336259709|ref|XP_003344654.1| hypothetical protein SMAC_07222 [Sordaria macrospora k-hell]
Length = 631
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/338 (37%), Positives = 178/338 (52%), Gaps = 59/338 (17%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTR+L+EFF VG V + +++ + R KG+ Y+EFK
Sbjct: 177 LTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKSE 236
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNIT 127
E V A+ L GQKLLGIP+IVQ T+AEKNR T + P RLY+G++HF+IT
Sbjct: 237 EHVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTESTGHHPNSIPFHRLYVGNIHFSIT 296
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E L+ +FEPFG+++ +QL D D GRS+GYGF+ ++ +++NGF+LAGRP++
Sbjct: 297 EQDLQNVFEPFGELEFVQLQKD-DNGRSRGYGFVQ------PERPSKKMNGFDLAGRPIR 349
Query: 188 VGTVTDR---------------------------NESVGGGP--SNLDT----------- 207
VG D+ + + G GP SN D
Sbjct: 350 VGLGNDKFTPESTANLLQRFQGQNHHQQFQGSAFSGAGGRGPATSNFDRAGARDNEKGTG 409
Query: 208 ----DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSS 263
D+ + AGV+ R LM KLA + PPA+ + IL T
Sbjct: 410 ASALDDTDVAGVNFNNYSRDALMRKLAR---TDEPPASV----VPDRQILKPKTETKPLP 462
Query: 264 TAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC 301
+A++C +L NMFDPA E W E+ DDV EE
Sbjct: 463 VNVNMASRCVVLHNMFDPAEEEGEDWIKELEDDVREEA 500
>gi|392597434|gb|EIW86756.1| splicing factor CC1-like protein [Coniophora puteana RWD-64-598
SS2]
Length = 360
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/319 (38%), Positives = 180/319 (56%), Gaps = 38/319 (11%)
Query: 3 PAY---SDDLSPEE-----RDARTIFCMQLSQRIRTRDLEEFFSSV---GKVRDVRLITC 51
P+Y +D +P+E +AR++F QL+ R+ RDL FF G V D R++T
Sbjct: 8 PSYDQQQEDYNPDEPKEDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVLDSRIVTD 67
Query: 52 NKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNR--AGNTLPNLQP- 108
+RR KGI Y+EF+ + V A+GL+G ++G+PI+VQ T++E+NR G+ NL P
Sbjct: 68 RISRRSKGIGYVEFRSIDLVEKALGLSGTVVMGLPIMVQLTESERNRLHPGDGNLNLPPG 127
Query: 109 -RGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSAD 167
G M+LY+GSLHFN+TE ++ +FEPFG ++ + L D TGRSKGY F+ + +
Sbjct: 128 VHAPHGAMQLYVGSLHFNLTEADIKQVFEPFGDLEFVDLHRDSTTGRSKGYAFVQYKRPE 187
Query: 168 DAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMF 227
DAK A EQ++GFELAGR ++V TV ++ + +L+ E G +L A R LM
Sbjct: 188 DAKMALEQMDGFELAGRTLRVNTVHEKGTARYTQQDSLE----ETGGGNLNAASRQALMQ 243
Query: 228 KLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNP 287
KLA +E P A + S PQ + ++ L+ NMFDP ET
Sbjct: 244 KLAR---IETPTPA--------EPVSRPSIPQA-------MQSRSVLMKNMFDPEEETER 285
Query: 288 TWDVEIRDDVIEECN-KHG 305
WD E+ +DV EC K+G
Sbjct: 286 DWDKELAEDVKGECQEKYG 304
>gi|328859425|gb|EGG08534.1| hypothetical protein MELLADRAFT_84729 [Melampsora larici-populina
98AG31]
Length = 649
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/353 (37%), Positives = 184/353 (52%), Gaps = 68/353 (19%)
Query: 2 RPAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSS-VGKVRDVRLITCNKTRRFKGI 60
R + S L+ EE + R++F QLS R+ R+L +FF GKVRD R+IT +RR KG+
Sbjct: 291 RRSSSPHLTEEEHEMRSVFVSQLSARVGDRELSQFFEQQAGKVRDARVITDRISRRSKGV 350
Query: 61 AYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAG--NTLPN------------- 105
Y+EF++ +SV A+ L G KLLG+P++VQ T+AEKNR NT PN
Sbjct: 351 GYVEFRELDSVQKALALTGTKLLGLPVMVQYTEAEKNRQAMANTQPNNVAAGLVTVAPPP 410
Query: 106 --------LQPRGTG-----GPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDT 152
+PRG G RLY+GSL+FN+T+D LR +F+PFG I+ + L D T
Sbjct: 411 PVQRSYVAPKPRGPGPNDPNSYARLYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRDQIT 470
Query: 153 GRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV----------------GTVTDRNE 196
G+SKGY F+ F + DAK A E++NGF+LAGR ++V G +
Sbjct: 471 GKSKGYAFVQFKNMHDAKNAMEKMNGFQLAGRALRVEIKAQPPAALLNATAPGVINPVIV 530
Query: 197 SVGGG-----PSNLDTDEMER-AGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQN 250
+ GG SN + +E G + R++LM KLA E P N+
Sbjct: 531 TPTGGNFAMTNSNSFEERLEEPVGSGMNQISRVELMHKLAR---TEQP------TNVPVT 581
Query: 251 AILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNK 303
+ + P +S + LL NMF+P ET WD+E+RDDV EC +
Sbjct: 582 DMFRPNIPTATS--------RSVLLKNMFNPEEETERGWDMELRDDVKGECEE 626
>gi|170083917|ref|XP_001873182.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650734|gb|EDR14974.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 448
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 177/311 (56%), Gaps = 30/311 (9%)
Query: 3 PAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSV---GKVRDVRLITCNKTRRFKG 59
P D+ ++ +AR++F QL+ R+ RDL FF G V D R++T +RR KG
Sbjct: 104 PYNPDEPKEDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDSRIVTDRLSRRSKG 163
Query: 60 IAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNR--AGNTLPNLQPRGTG--GPM 115
I Y+EF+ + V A+ L+G ++G+PI+VQ T++E+N+ G+ NL P T G +
Sbjct: 164 IGYVEFRTIDHVEKALALSGTVVMGLPIMVQLTESERNKLHPGDGSLNLPPGVTASHGAI 223
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
LY+GSLHFN+TE ++ +FEPFG+++ + L DP TGRSKGY F+ + ++DA+ A EQ
Sbjct: 224 -LYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRSEDARMALEQ 282
Query: 176 LNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGL 235
+ GFELAGR ++V TV ++ + +LD E G +L A R LM KLA
Sbjct: 283 MEGFELAGRTLRVNTVHEKGTARYTQQDSLD----EAGGGNLNAASRQALMQKLAR---T 335
Query: 236 ELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRD 295
E PP + + PQ + ++ LL NMFDP ET WD E+ D
Sbjct: 336 EAPPTFT-------EPVARPNIPQA-------MQSRSVLLKNMFDPEEETERDWDKELAD 381
Query: 296 DVIEEC-NKHG 305
DV EC NK+G
Sbjct: 382 DVKVECENKYG 392
>gi|116200107|ref|XP_001225865.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
gi|88179488|gb|EAQ86956.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 133/367 (36%), Positives = 187/367 (50%), Gaps = 83/367 (22%)
Query: 8 DLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
D SP +ERD RT+F QL+ R+RTR+L+EFF VG V + +++ + R KG+ Y+EF
Sbjct: 172 DTSPTGDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEF 231
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNR-----AGNTLPNLQPRGTGGPMRLYIG 120
K ESV A+ L GQKLLGIP+IVQPT+AEKNR + PN P RLY+G
Sbjct: 232 KGEESVAAALQLTGQKLLGIPVIVQPTEAEKNRQVRNSESSGHPNSVPF-----HRLYVG 286
Query: 121 SLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFE 180
++HF+ITE L+ +FEPFG+++ +QL D D+GRS+GYGF+ F A A++A E++NGF+
Sbjct: 287 NIHFSITETDLQNVFEPFGELEFVQLQKD-DSGRSRGYGFVQFRDAGQAREALEKMNGFD 345
Query: 181 LAGRPMKVGTVTDR---------------------------NESVGGGP--SNLDT---- 207
LAGRP++VG D+ + + G GP SN D
Sbjct: 346 LAGRPIRVGLGNDKFTPESTANLLRGFQGQNQNQQFQGSSFSGAGGRGPQASNFDRAGGR 405
Query: 208 -----------DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSS 256
D+ + AGV+ R LM KLA + P + IL
Sbjct: 406 DNEKGTGASALDDTDVAGVNFNNYSRDALMRKLAR---TDEPTNGQ-----PERQILKPK 457
Query: 257 TPQVSSSTAPPIATQCFLLANMFDPAT-----------------ETNPTWDVEIRDDVIE 299
T +A++C +L NMFDPA + W E+ D+V +
Sbjct: 458 TETKPLPVNVSMASRCVVLRNMFDPAEYVFYSPPSEAGSLTSARQVGDDWAKELEDEVRQ 517
Query: 300 EC-NKHG 305
E K+G
Sbjct: 518 EAEEKYG 524
>gi|428174818|gb|EKX43711.1| hypothetical protein GUITHDRAFT_163728 [Guillardia theta CCMP2712]
Length = 501
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 167/295 (56%), Gaps = 13/295 (4%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
+RD RTIF Q++++ RDL +FFS GKV DVR+I +TRR KGIAY+EF+ E
Sbjct: 150 DRDMRTIFVAQVARKADERDLFQFFSEAGKVVDVRIIKDTQTRRSKGIAYVEFEKQEQCV 209
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
A+ +GQ L G P++VQ +QAEKN+A + P +L + +LH +I ED L+
Sbjct: 210 AAVQKSGQLLCGFPVVVQASQAEKNQAARLAAQVAGE-LDLPAKLQVDNLHMDIAEDDLQ 268
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV---- 188
+F PFGK+ + + ++ + GRS G G + F + DA+KA LNGF+LAG+ + V
Sbjct: 269 TLFSPFGKV--LSVRINKEHGRSTGKGVVEFKTLQDAQKAVAHLNGFDLAGKALNVRIIQ 326
Query: 189 --GTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
G+ + S GGP+ D+ E GV + A R LM KLA G +L A ++L
Sbjct: 327 SAGSGYTGSMSSSGGPATEMLDDNEIGGVHVSAQSRHSLMQKLARGDA-QLTSAVPNSL- 384
Query: 247 LAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC 301
+ L S P + + +L NMFDPA ET P + VEI+DDV EEC
Sbjct: 385 --MSGALQPSKPANAIPNGQSQPSVFMVLVNMFDPAKETEPDFHVEIQDDVKEEC 437
>gi|299755304|ref|XP_002912089.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
gi|298411164|gb|EFI28595.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
Length = 580
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 122/316 (38%), Positives = 174/316 (55%), Gaps = 45/316 (14%)
Query: 7 DDLSPEE-----RDARTIFCMQLSQRIRTRDLEEFFSSV---GKVRDVRLITCNKTRRFK 58
DD +P+E +AR++F QL+ R+ RDL FF G V D R++T +RR K
Sbjct: 237 DDYNPDEPKDDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDARIVTDRLSRRSK 296
Query: 59 GIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNR--AGNTLPNLQPRGTGGPMR 116
GI Y+EF+ + V A+ L+G ++G+PI VQ T++E+N+ AG+ +L P T
Sbjct: 297 GIGYVEFRSIDLVEKAIALSGTIVMGLPINVQLTESERNKSHAGDGSLHLPPGVTASGAI 356
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+GSLHFN+TE ++ +FEPFG+++ + L DP TGRSKGY F+ + A+DA+ A EQ+
Sbjct: 357 LYVGSLHFNLTESDIKQVFEPFGELEFVDLHKDPMTGRSKGYAFVQYKRAEDARMALEQM 416
Query: 177 NGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERA-GVDLGATGRLQLMFKLAEGTGL 235
GFELAGR ++V TV ++ G TD ++ + G +L A R LM KLA
Sbjct: 417 EGFELAGRTLRVNTVHEK-----GSVRYTQTDSLDDSGGANLNAASRQALMQKLA----- 466
Query: 236 ELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCF-----LLANMFDPATETNPTWD 290
+ P V + PI Q LL NMF+P ET WD
Sbjct: 467 ------------------RTEQPVVPAEPVKPIIPQAMQSRSVLLKNMFNPEEETEQNWD 508
Query: 291 VEIRDDVIEEC-NKHG 305
++ DDV EC NK+G
Sbjct: 509 KDLADDVKGECENKYG 524
>gi|71003261|ref|XP_756311.1| hypothetical protein UM00164.1 [Ustilago maydis 521]
gi|46096316|gb|EAK81549.1| hypothetical protein UM00164.1 [Ustilago maydis 521]
Length = 640
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 183/366 (50%), Gaps = 78/366 (21%)
Query: 10 SPE--ERDARTIFCMQLSQRIRTRDLEEFFSS---VGKVRDVRLITCNKTRRFKGIAYIE 64
SPE + + R++FC QLS R+ RDL EFF G V+DVR++ T R KG+ Y+E
Sbjct: 238 SPEIDDYEERSVFCSQLSARLGQRDLGEFFEDHLGEGAVQDVRIVMDRVTHRSKGVGYVE 297
Query: 65 FKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAG--------NTLPNLQPRGT----- 111
F E VP A+ L G+ + GIPI+VQ T A ++ G + P + P
Sbjct: 298 FAARELVPKAIELTGKIVFGIPIVVQRTDAARSNGGAPRGPGDVSNHPGMAPHPAVAATQ 357
Query: 112 ------------------GGPM-----------------------RLYIGSLHFNITEDM 130
G P+ RLY+GSLHF++T++
Sbjct: 358 LDARVLANAPLPMQYHMAGAPIHLEAALRPPRALRPGPNMPNTEARLYVGSLHFSLTDEA 417
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ +FEPFG+I+ + L +P+TG+SKG+ FI F A+DAKKA EQ+NGF LA R ++VG
Sbjct: 418 VKTVFEPFGEIEYVDLHREPETGKSKGFCFIQFKKAEDAKKALEQMNGFVLADRAIRVGN 477
Query: 191 VTDRNESVGGGPSNLDTDEMERAGVDLGATGRL-QLMFKLAEGTGLELPPAAASALNLAQ 249
V + GGG S+ + + D G L QL +G G L P +AL + +
Sbjct: 478 VNAKGS--GGGSSHTNG-----SAQDFQGGGHLPQLTSSFDDGGGAGLNPERRAAL-MEK 529
Query: 250 NAILNSSTPQVSSSTA---------PPIATQCFLLANMFDPATETNPTWDVEIRDDVIEE 300
A N +P S +T P + LL NMFDPA ET P WD ++ +DV EE
Sbjct: 530 LARHNEPSPAASEATTTVQERPAGIPESTSTSLLLKNMFDPAEETEPNWDTDLAEDVKEE 589
Query: 301 CN-KHG 305
C K+G
Sbjct: 590 CQAKYG 595
>gi|440487895|gb|ELQ67659.1| RNA-binding protein rsd1 [Magnaporthe oryzae P131]
Length = 570
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 133/186 (71%), Gaps = 1/186 (0%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTR+L+EFF G V + +++ + R KG+ Y+EFK
Sbjct: 167 LTEDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTE 226
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
ESV A+ L GQKLLGIP+IVQPT+AEKNRA T + + RLY+G++HF+ITE
Sbjct: 227 ESVAAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVPFHRLYVGNIHFSITE 286
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
L+ +FEPFG+++ +QL D D+GRS+GYGF+ F A A++A E++NGF+LAGRP++V
Sbjct: 287 QDLQNVFEPFGELEFVQLQKD-DSGRSRGYGFVQFRDATQAREALEKMNGFDLAGRPIRV 345
Query: 189 GTVTDR 194
G D+
Sbjct: 346 GLGNDK 351
>gi|346327401|gb|EGX96997.1| RNA splicing factor (Pad-1), putative [Cordyceps militaris CM01]
Length = 545
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 183/368 (49%), Gaps = 70/368 (19%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+R+R+L+ FF VG V + +++ + R KG+ Y+EFK+
Sbjct: 151 LNEDERDRRTVFVQQLAARLRSRELKAFFEKVGPVTEAQIVKDRISGRSKGVGYVEFKNE 210
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRA------GNTLPNLQPRGTGGPMRLYIGSL 122
+SV A+ L GQKLLGIP+IVQ T+AEKNR G + PN P RLY+G++
Sbjct: 211 DSVAPALQLTGQKLLGIPVIVQVTEAEKNRQARTTEPGGSHPNHVPF-----HRLYVGNI 265
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
HFN+TE L+ +F+PFG+++ +QL D +T RS+GYGF+ F A A++A E++NGF+LA
Sbjct: 266 HFNVTEQDLQAVFDPFGELEFVQLQKD-ETNRSRGYGFVQFRDAGQAREALEKMNGFDLA 324
Query: 183 GRPMKVGTVTD---------------------------------------------RNES 197
GRP++VG D R+
Sbjct: 325 GRPIRVGLGNDKFTPESTANMLQRFSGQNASNQQGSSFSGSGGRGGQNSNFDRAGARDSE 384
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSST 257
GG S LD ++ GV+ R LM KLA S + +L T
Sbjct: 385 KTGGASALDDTDV--GGVNFNNYSRDALMRKLAR--------TDESNKGSDERPVLKPRT 434
Query: 258 PQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNK---HGVGASTVCFI 314
A++C +L NMF+P E W E+ DDV +E + H V S
Sbjct: 435 ETKPLPMNVNTASRCVVLHNMFEPDEEEGDDWVKELEDDVRQEAEEKYGHVVHISVDPNS 494
Query: 315 YSVIFLKL 322
I+LK
Sbjct: 495 KGDIYLKF 502
>gi|328770116|gb|EGF80158.1| hypothetical protein BATDEDRAFT_11758 [Batrachochytrium
dendrobatidis JAM81]
Length = 389
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 118/307 (38%), Positives = 171/307 (55%), Gaps = 26/307 (8%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+FCMQL+ R+R+ +L +FF + GKVRD L+ T R KG+AY+EF + E+V
Sbjct: 36 ERDKRTVFCMQLAARLRSHELVKFFEACGKVRDASLVIDKHTGRSKGVAYVEFYEVEAVS 95
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
A+ + GQKLLGIPIIVQ T+AE+NR L R+Y+GSL +++TE +
Sbjct: 96 KALEMTGQKLLGIPIIVQLTEAERNRVA--LQAASKTVDTAASRIYVGSLDYSLTEQDVA 153
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
F+ FG I+ I + +D +TG SKGY F+ + K LN F L + ++V ++
Sbjct: 154 NAFQGFGPIEFINIHMDKETGHSKGYAFVQY------VKDAWFLNIFILKLQ-IRVNLIS 206
Query: 193 DRNES--------VGGGPSNLDT---DEMERAGVDLGATGRLQLMFKLA--EGTGLELPP 239
++++S VG N+ T D+ E G + + R +LM KLA E T +
Sbjct: 207 EKSQSAPVTNASNVGIASENIATFNMDDGEMEGFQMNSLSRAELMAKLARTEPTLSKTSA 266
Query: 240 AAASALNLAQNAILNSST-PQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVI 298
+ A+ + + +SST P V P + T+C LL NMF+P E W EI +DV
Sbjct: 267 SVAAIIFTNTYFVFDSSTKPAV---VVPTMETRCVLLKNMFNPENEVESNWVQEIEEDVK 323
Query: 299 EECNKHG 305
EEC K G
Sbjct: 324 EECTKFG 330
>gi|430811846|emb|CCJ30702.1| unnamed protein product [Pneumocystis jirovecii]
Length = 486
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 168/336 (50%), Gaps = 79/336 (23%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTR+L FF VG VRD +++ + R KG
Sbjct: 136 LTEDERDRRTVFVQQLAARLRTRELIAFFEKVGPVRDAQVVKDRVSGRSKG--------- 186
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQP--RGTGGPM-RLYIGSLHFN 125
++LLGIPIIVQ T+AEKNR L R + P RLY+G++HFN
Sbjct: 187 ----------AKRLLGIPIIVQLTEAEKNRQAKAEAMLSSGGRQSDAPFHRLYVGNIHFN 236
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
+TED LR IFEPFG+++ +QL +PDTGRS+GYGF+ + A+ A E++NGFELAGR
Sbjct: 237 LTEDDLRQIFEPFGELEFVQLQKEPDTGRSRGYGFVQYRDPAQARDALEKMNGFELAGRA 296
Query: 186 MKVGTVTDR----------------------------NESVGG---GPSNLDTDEMERAG 214
++VG D+ E +GG G S++ D+ E G
Sbjct: 297 IRVGLGNDKFTPESTSAVLARFSGFTGSAFENKNRGGTERIGGPRDGSSSVSLDDNEAGG 356
Query: 215 VDLGATGRLQLMFKLAEGTGLE----LPPAAASALNLAQNAILNSSTPQVSSSTAPPIAT 270
V R LM KLA G E PP A+ + +
Sbjct: 357 VSFNNISRDALMRKLAREEGKESIGLAPPKPTPAVQM---------------------TS 395
Query: 271 QCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHG 305
+C LL NMF+P E+ W E+ DDV EC NK+G
Sbjct: 396 RCVLLKNMFNPQEESGDNWIRELEDDVKAECENKYG 431
>gi|341038993|gb|EGS23985.1| RNA splicing factor (pad-1)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 594
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 93/184 (50%), Positives = 130/184 (70%), Gaps = 4/184 (2%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+ERD RT+F QL+ R+RTR+L+EFF G V + +++ + R KG+ Y+EFK ESV
Sbjct: 225 DERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKSEESV 284
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNITEDM 130
A+ L GQKLLGIPIIVQPT+AEKNR T P P RLY+G++HF+ITE
Sbjct: 285 AAALQLTGQKLLGIPIIVQPTEAEKNRQARTTSGHHPNSV--PFHRLYVGNIHFSITETD 342
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
L+ +FEPFG+++ +QL D + GRS+GYGF+ F A +A++A E++NGF+LAGRP++VG
Sbjct: 343 LQHVFEPFGELEFVQLQKD-ENGRSRGYGFVQFRDAANAREALEKMNGFDLAGRPIRVGL 401
Query: 191 VTDR 194
D+
Sbjct: 402 GNDK 405
>gi|213410431|ref|XP_002175985.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
gi|212004032|gb|EEB09692.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
Length = 540
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 186/338 (55%), Gaps = 39/338 (11%)
Query: 3 PAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY 62
P YS+ EERD RT+F QL+ R+ T +L EFF G VRD +++ T R KG+AY
Sbjct: 207 PHYSE----EERDRRTVFVTQLANRLTTHELREFFEQAGAVRDAQIVRDRVTGRSKGVAY 262
Query: 63 IEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM---RLYI 119
+EF+ +SV +A+ L+G+++LGIP+IVQ T+AEKNR L Q R + RL +
Sbjct: 263 VEFRREDSVQVALTLSGKRILGIPVIVQLTEAEKNRKARELSE-QNRALSAELPFHRLCV 321
Query: 120 GSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGF 179
G++HFNIT++ L+ IFEPFG+++ ++L D D RSKG+GFI F A+ A E++NGF
Sbjct: 322 GNIHFNITDEDLKAIFEPFGELEYVRLQRD-DQNRSKGFGFIQFRDPLCARIALEKMNGF 380
Query: 180 ELAGRPMKVGTVTDR--NESVGGGPSNLDTDEME-------------RAGVDLGATGRL- 223
+LAGR ++VG TD+ E+ D+ A D + RL
Sbjct: 381 DLAGRQLRVGLGTDKFATETTASMLRRFDSSYSRYKHEHVSQPTPSISASSDEASHQRLV 440
Query: 224 QLMFKLAEGTGLELPPAAASALNLAQNAILN--SSTPQVSSS----TAPPIATQCFLLAN 277
+ L EG L P+ S ++++ ++ + Q+ S+ + PP T+C LL N
Sbjct: 441 KSSDNLDEGN---LSPSEDSRPAISRDELMKKLARNEQIVSTDDSLSKPP--TRCVLLQN 495
Query: 278 MFDPATETNPTWDVEIRDDVIEECNK---HGVGASTVC 312
MF+P ET W E+ V EEC + H V S V
Sbjct: 496 MFNPEEETGDHWMEELALHVREECEEKYGHPVEDSGVS 533
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 179/351 (50%), Gaps = 62/351 (17%)
Query: 2 RPAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFS-SVGKVRDVRLITCNKTRRFKGI 60
R + S L+ +ERD+RT+F QL+ R+R+ L+ FF + G V + +++ + R KG+
Sbjct: 162 RRSRSPQLNEDERDSRTVFVQQLAARLRSDKLKRFFEENAGPVNEAQIVKDRISGRSKGV 221
Query: 61 AYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYI 119
Y+EFKD E+V A+ L G+ L GIPIIV+ T+AEKNR + P RLY+
Sbjct: 222 GYVEFKDEETVQKALQLTGKPLAGIPIIVKLTEAEKNRQARNTESTSGNPNSVPFHRLYV 281
Query: 120 GSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGF 179
G++HFN+TE L+ +FEPFG+++ +QL D D GRS+GYGF+ F A A++A E++NGF
Sbjct: 282 GNIHFNVTEQDLQAVFEPFGELEYVQLQKD-DNGRSRGYGFVQFRDATQAREALEKMNGF 340
Query: 180 ELAGRPMKVGTVTD-------------------------------------------RNE 196
+LAGRP++VG D R+
Sbjct: 341 DLAGRPIRVGLGNDKFTPESTANLMHRFSGQNNFQGSAFSGAGGRGGQASTFDRAGGRDS 400
Query: 197 SVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSS 256
GG S LD ++ AGV+ R LM KLA A N ++ ++
Sbjct: 401 DKAGGASALDDTDV--AGVNFNNYSRDALMRKLAR---------TDEASNGREDQVV--V 447
Query: 257 TPQVSSSTAP---PIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKH 304
P+ + P +A++C +L NMFDP E W E+ DD+ E +
Sbjct: 448 KPKTEAKPLPVNVNMASRCVVLHNMFDPEEEEGDDWVKELEDDIRAEAERQ 498
>gi|426201409|gb|EKV51332.1| hypothetical protein AGABI2DRAFT_189584 [Agaricus bisporus var.
bisporus H97]
Length = 563
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/320 (38%), Positives = 177/320 (55%), Gaps = 37/320 (11%)
Query: 1 MRPAYS--DDLSPEE-----RDARTIFCMQLSQRIRTRDLEEFFSSV---GKVRDVRLIT 50
+ P+Y +D +P+E +AR++F QL+ R+ RDL FF G V D R++T
Sbjct: 210 LSPSYDAGEDYNPDEPKEDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDARIVT 269
Query: 51 CNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNR--AGNTLPNLQP 108
+RR KGI Y+EF+ E V A+GL+G ++G+PI+VQ T+AE+N+ AG+ NL P
Sbjct: 270 DRLSRRSKGIGYVEFRTIELVEKAIGLSGTVVMGLPIMVQLTEAERNKTHAGDGSINLPP 329
Query: 109 RGTGGPMR--LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSA 166
G P LY+GSLHFN+TE ++ +FE FG+++ + L D TGRSKGY F+ + A
Sbjct: 330 -GVSAPHGAILYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRA 388
Query: 167 DDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLM 226
+DA+ A +Q+ GFELAGR ++V TV ++ + +LD E G +L A R LM
Sbjct: 389 EDARMALQQMEGFELAGRTLRVNTVHEKGTTKYTQQDSLD----ESGGGNLNAASRQALM 444
Query: 227 FKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETN 286
KLA P N+ Q + ++ LL NMFDP ET
Sbjct: 445 QKLARTDQPAPRPEPVQRPNIPQ-----------------AMQSRSVLLKNMFDPDEETE 487
Query: 287 PTWDVEIRDDVIEEC-NKHG 305
WD E+ DV EC +K+G
Sbjct: 488 KDWDRELAQDVKGECESKYG 507
>gi|409083550|gb|EKM83907.1| hypothetical protein AGABI1DRAFT_110515 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 563
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/320 (38%), Positives = 177/320 (55%), Gaps = 37/320 (11%)
Query: 1 MRPAYS--DDLSPEE-----RDARTIFCMQLSQRIRTRDLEEFFSSV---GKVRDVRLIT 50
+ P+Y +D +P+E +AR++F QL+ R+ RDL FF G V D R++T
Sbjct: 210 LSPSYDAGEDYNPDEPKEDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDARIVT 269
Query: 51 CNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNR--AGNTLPNLQP 108
+RR KGI Y+EF+ E V A+GL+G ++G+PI+VQ T+AE+N+ AG+ NL P
Sbjct: 270 DRLSRRSKGIGYVEFRTIELVEKAIGLSGTVVMGLPIMVQLTEAERNKTHAGDGSINLPP 329
Query: 109 RGTGGPMR--LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSA 166
G P LY+GSLHFN+TE ++ +FE FG+++ + L D TGRSKGY F+ + A
Sbjct: 330 -GVSAPHGAILYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRA 388
Query: 167 DDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLM 226
+DA+ A +Q+ GFELAGR ++V TV ++ + +LD E G +L A R LM
Sbjct: 389 EDARMALQQMEGFELAGRTLRVNTVHEKGTTKYTQQDSLD----ESGGGNLNAASRQALM 444
Query: 227 FKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETN 286
KLA P N+ Q + ++ LL NMFDP ET
Sbjct: 445 QKLARTDQPAPRPEPVQRPNIPQ-----------------AMQSRSVLLKNMFDPDEETE 487
Query: 287 PTWDVEIRDDVIEEC-NKHG 305
WD E+ DV EC +K+G
Sbjct: 488 KDWDRELAQDVKGECESKYG 507
>gi|328848768|gb|EGF97966.1| hypothetical protein MELLADRAFT_84111 [Melampsora larici-populina
98AG31]
Length = 695
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/360 (36%), Positives = 184/360 (51%), Gaps = 75/360 (20%)
Query: 2 RPAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSS-VGKVRDVRLITCNKTRRFKGI 60
R + S L+ EE + R++F QLS R+ R+L +FF GKVRD R+IT +RR KG+
Sbjct: 291 RRSSSPHLTEEEHEMRSVFVSQLSARVGDRELSQFFEQQAGKVRDARVITDRISRRSKGV 350
Query: 61 AYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRA--GNTLPN------------- 105
Y+EF++ +SV A+ L G KLLG+P++VQ T+AEKNR NT PN
Sbjct: 351 GYVEFRELDSVQKALALTGTKLLGLPVMVQYTEAEKNRQAMANTQPNNVAAGLVTVPPAP 410
Query: 106 --------LQPRGTG-----GPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDT 152
+PRG G RLY+GSL+FN+T+D LR +F+PFG I+ + L D T
Sbjct: 411 PVQRSYVAPKPRGPGPNDPNSYARLYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRDQIT 470
Query: 153 GRSKGYGF-------ITFHSADDAKKAQEQLNGFELAGRPMKV----------------G 189
G+SKGY F I F + DAK A E++NGF+LAGR ++V G
Sbjct: 471 GKSKGYAFTLLTCVNIRFKNMHDAKNAMEKMNGFQLAGRALRVEIKAQPPAALLNATAPG 530
Query: 190 TVTDRNESVGGG-----PSNLDTDEMER-AGVDLGATGRLQLMFKLAEGTGLELPPAAAS 243
+ + GG SN + +E G + R++LM KLA E P
Sbjct: 531 VINPVIVTPTGGNFAMTNSNSFEERLEEPVGSGMNQISRVELMHKLAR---TEQP----- 582
Query: 244 ALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNK 303
N+ + + P +S + LL NMF+P ET WD+E+RDDV EC +
Sbjct: 583 -TNVPVTDMFRPNIPTATS--------RSVLLKNMFNPEEETERGWDMELRDDVKGECEE 633
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/344 (34%), Positives = 176/344 (51%), Gaps = 62/344 (18%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFS-SVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
L+ +ERD+RT+F QL+ R+R+ L+ FF + G V + +++ + R KG+ Y+EFKD
Sbjct: 165 LNEDERDSRTVFVQQLAARLRSDKLKRFFEENAGPVNEAQIVKDRISGRSKGVGYVEFKD 224
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNI 126
E+V A+ L G+ L GIPIIV+ T+AEKNR + P RLY+G++HFN+
Sbjct: 225 EETVQKALQLTGKPLAGIPIIVKLTEAEKNRQARNTESTSGNPNSVPFHRLYVGNIHFNV 284
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE L+ +FEPFG+++ +QL D D GRS+GYGF+ F A A++A E++NGF+LAGRP+
Sbjct: 285 TEQDLQAVFEPFGELEYVQLQKD-DNGRSRGYGFVQFRDATQAREALEKMNGFDLAGRPI 343
Query: 187 KVGTVTD-------------------------------------------RNESVGGGPS 203
+VG D R+ GG S
Sbjct: 344 RVGLGNDKFTPESTANLMHRFSGQNNFQGSAFSGAGGRGGQASTFDRAGGRDSDKAGGAS 403
Query: 204 NLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSS 263
LD ++ AGV+ R LM KLA A N ++ ++ P+ +
Sbjct: 404 ALDDTDV--AGVNFNNYSRDALMRKLAR---------TDEASNGREDQVV--VKPKTEAK 450
Query: 264 TAP---PIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKH 304
P +A++C +L NMFDP E W E+ DD+ E +
Sbjct: 451 PLPVNVNMASRCVVLHNMFDPEEEEGDDWVKELEDDIRAEAERQ 494
>gi|380088391|emb|CCC13655.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 606
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 168/309 (54%), Gaps = 26/309 (8%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTR+L+EFF VG V + +++ + R KG+ Y+EFK
Sbjct: 177 LTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKSE 236
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNIT 127
E V A+ L GQKLLGIP+IVQ T+AEKNR T + P RLY+G++HF+IT
Sbjct: 237 EHVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTESTGHHPNSIPFHRLYVGNIHFSIT 296
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSAD---------DAKKAQEQLNG 178
E L+ +FEPFG+++ +QL D D GRS+GYGF+ + + + + +Q G
Sbjct: 297 EQDLQNVFEPFGELEFVQLQKD-DNGRSRGYGFVQYFTPESTANLLQRFQGQNHHQQFQG 355
Query: 179 FELAGRPMKVGTVTD------RNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEG 232
+G + ++ R+ G G S LD ++ AGV+ R LM KLA
Sbjct: 356 SAFSGAGGRGPATSNFDRAGARDNEKGTGASALDDTDV--AGVNFNNYSRDALMRKLAR- 412
Query: 233 TGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVE 292
+ PPA+ + IL T +A++C +L NMFDPA E W E
Sbjct: 413 --TDEPPASV----VPDRQILKPKTETKPLPVNVNMASRCVVLHNMFDPAEEEGEDWIKE 466
Query: 293 IRDDVIEEC 301
+ DDV EE
Sbjct: 467 LEDDVREEA 475
>gi|398407631|ref|XP_003855281.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
gi|339475165|gb|EGP90257.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
Length = 598
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 175/347 (50%), Gaps = 68/347 (19%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+L EERD RT+F QL+ +RT+ L+ FF G V + +++ + R KG+ Y+EF D
Sbjct: 203 ELDQEERDKRTVFVQQLAAALRTKQLKAFFEQSGPVVEAQIVKDRVSGRSKGVGYVEFAD 262
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNI 126
ESV A+ L GQKL+ IPIIVQ T+AEKNR T + G P RLY+G++HF+I
Sbjct: 263 EESVQKALELTGQKLMNIPIIVQLTEAEKNRQARTSEGQPTQSNGIPFHRLYVGNIHFSI 322
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
E LR +FEPFG+++ +QL + DTGRSKGYGF+ F +D+AK A E++NGFE+AGRP+
Sbjct: 323 EESDLRDVFEPFGELEFVQLQKE-DTGRSKGYGFVQFAKSDEAKIALEKMNGFEVAGRPI 381
Query: 187 KVGTVTD--------------------------------------------------RNE 196
+VG +D R
Sbjct: 382 RVGLGSDKFTPETTSALLQRFGSQAHHAQMQGSSFSGAGGRGAHAGGQNNFDRSTNAREH 441
Query: 197 SVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSS 256
G LD ++ GV R LM KLA E P + + L Q +++
Sbjct: 442 DKSGASGALDDTDV--GGVAFNNYSRHALMSKLARTD--EPQPVVETKVALPQRVVVDEP 497
Query: 257 TPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNK 303
P ++C L+ N+++ + ET + +++ D+ EEC+K
Sbjct: 498 NP-----------SRCVLIKNVYNHSKETEESL-ADLKVDMREECDK 532
>gi|429243189|ref|NP_594422.2| RNA-binding protein Rsd1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|380865416|sp|O13845.2|RSD1_SCHPO RecName: Full=RNA-binding protein rsd1
gi|347834186|emb|CAB10118.2| RNA-binding protein Rsd1 (predicted) [Schizosaccharomyces pombe]
Length = 603
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 185/350 (52%), Gaps = 57/350 (16%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
LS EERD RT+F QL+ R+ +R+L +FF G VRD +++ + R KG+AY+EF
Sbjct: 232 LSEEERDRRTVFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHE 291
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGG-PM-RLYIGSLHFNI 126
+SV A+ L+G++LLG+P+IVQ T+AEKNR L + P RL + ++HFN+
Sbjct: 292 DSVQAAIALSGKRLLGLPVIVQLTEAEKNRKAREAAELARAASAEIPFHRLCVSNIHFNL 351
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
T++ ++ IFEPFG I+ + L D D RSKG+G+I + + A+ A E++NGF+LAGR M
Sbjct: 352 TDEDVKAIFEPFGDIEFVHLQRD-DQNRSKGFGYIQYRNPISARNALEKMNGFDLAGRNM 410
Query: 187 KVGTVTDR-------------NESVG-----------GGPSNLDTDEMERAGVDLGAT-- 220
+V D+ +E++ GG S ++ + R L T
Sbjct: 411 RVCLGNDKFTTETTSSMLKRFDETLARQERSQPSQRNGGSSTYESQDY-REAAPLSPTEE 469
Query: 221 -----GRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLL 275
R +LM KLA + S ++ S PPI ++C LL
Sbjct: 470 ESRPITRDELMKKLARSEDI-------------------SDNSKLVSEPEPPIRSRCALL 510
Query: 276 ANMFDPATETNPTWDVEIRDDVIEECN-KHG--VGASTVCFIYSVIFLKL 322
NMF+PA ET+P W E+ DV EEC+ K+G V + V IF+K
Sbjct: 511 ENMFNPAEETSPNWVQELEQDVKEECDEKYGKVVHIAVVPNELGQIFVKF 560
>gi|78708720|gb|ABB47695.1| splicing factor, CC1-like family protein, expressed [Oryza sativa
Japonica Group]
gi|215765085|dbj|BAG86782.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 339
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 171/299 (57%), Gaps = 43/299 (14%)
Query: 54 TRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRG--T 111
+RR KG+ YIEF D SVP+A+ L GQ LLG ++V+P++AEKN + N+ G +
Sbjct: 5 SRRSKGVGYIEFYDAMSVPMAIALTGQVLLGQQVMVKPSEAEKNLVQS---NVASGGIAS 61
Query: 112 GGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKK 171
GG +LY+G+LH NITED LR +FEPFG+++ +QL VDP TG KG+GFI F +DAK
Sbjct: 62 GGARKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGFIQFARLEDAKA 121
Query: 172 AQEQLNG-FELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL- 229
AQ LNG ++AGR +KV VT++ GG + D D+ E G+ L A+ R LM KL
Sbjct: 122 AQS-LNGQLDIAGRVIKVSAVTEQAGLQVGGATTGDLDDDEGGGLALNASSRAMLMRKLD 180
Query: 230 ---------------AEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIA----- 269
T +ELP A+ + L +++ + P + T P I
Sbjct: 181 RSGTATSITGGIGIPGVNTSVELPSASVTGAPLPTTSLIQPTIPAI--GTVPGIQIPGTQ 238
Query: 270 -------TQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
T+ LL NMFDPA ET+P +D++I+DDV +EC+K G V +T F+Y
Sbjct: 239 SADIGSPTEFLLLKNMFDPAVETDPDFDLDIKDDVQDECSKFGAVNHIFVDKNTAGFVY 297
>gi|402217675|gb|EJT97754.1| splicing factor CC1-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 640
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/335 (35%), Positives = 187/335 (55%), Gaps = 43/335 (12%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSV---GKVRDVRLITCNKTRRFKGIAYIEFKDP 68
E+ + R++F QL+ R+ RDL FF G VRDVR++T +RR KGIAY+E
Sbjct: 298 EDSELRSVFVSQLAARLTARDLGYFFEEKLGEGSVRDVRIVTDRVSRRSKGIAYVELSSI 357
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQ-PRGTGGP----MRLYIGSLH 123
+ V A+ L G ++G+PI+VQ T++E+N+ + ++ P G P M+LY+GSLH
Sbjct: 358 DMVSRAIALTGTIVMGLPIMVQLTESERNKVAASGSSMHLPPGVTAPPPGSMQLYVGSLH 417
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
FN+TE ++ +FEPFG+++ + L DP TGRSKG+ F+ + ++DA+ A + ++GF+LAG
Sbjct: 418 FNLTESDVKQVFEPFGELEFVDLHRDPLTGRSKGFAFVQYKRSEDARMALQSMDGFDLAG 477
Query: 184 RPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAAS 243
R +KV TV ++ ++ + DE G +L A R LM KLA +E P A S
Sbjct: 478 RQLKVNTVHEKGGAIRYQSQSDSLDES--GGGNLNAASRQALMQKLAR---IEPPKPAIS 532
Query: 244 ALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMF-DP---ATETNPTWDVEIRDDVIE 299
+ +S P+ + + ++ LL NMF +P E P W E+ DDV +
Sbjct: 533 PM---------ASLPKAA------MQSRSVLLRNMFKEPELEEKENGPNWAKELTDDVKQ 577
Query: 300 EC-NKHGVGASTVCFIYSVIFLKLWSYVQVNLWCR 333
EC +K+G+ V F+KL Q ++ +
Sbjct: 578 ECEDKYGL----------VDFIKLEPDSQGEMYLK 602
>gi|449551106|gb|EMD42070.1| hypothetical protein CERSUDRAFT_90674 [Ceriporiopsis subvermispora
B]
Length = 623
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 187/366 (51%), Gaps = 66/366 (18%)
Query: 3 PAYS-----DDLSPEE-----RDARTIFCMQLSQRIRTRDLEEFFSSV---GKVRDVRLI 49
P+Y D ++PEE +AR++F QL+ R+ RDL FF G V D R++
Sbjct: 251 PSYEPIVDVDPMNPEEPREDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGSVMDSRIV 310
Query: 50 TCNKTRRFKG-----------------IAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPT 92
T +RR KG I Y+EF+ E V A+ L+G ++G+PI +Q T
Sbjct: 311 TDRISRRSKGLLLIISRINTSLTFCLRIGYVEFRTVELVDKAIALSGTVVMGLPIQIQHT 370
Query: 93 QAEKNR--AGNTLPNLQP--RGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMV 148
+AE+NR G+ NL P + G M+LY+GSLHFN+TE ++ +FEPFG+++ + L
Sbjct: 371 EAERNRLHPGDGNLNLPPGVSASHGGMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHR 430
Query: 149 DPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTD 208
DP TGRSKGY F+ + ++DA+ A EQ+ GFELAGR ++V TV ++ +LD
Sbjct: 431 DPMTGRSKGYAFVQYKRSEDARMALEQMEGFELAGRTLRVNTVHEKGTIRYTQQDSLD-- 488
Query: 209 EMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPI 268
E G +L A R LM KLA + P N+ Q +
Sbjct: 489 --EAGGGNLNAASRQALMQKLARTDQTVITPPPVVRPNIPQT-----------------M 529
Query: 269 ATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVCFIYSVIFLKLWSYVQ 327
++ LL NMF+P ET WD ++ +DV EC +K+G V F+K+ Q
Sbjct: 530 QSRSVLLKNMFNPENETERDWDKDLAEDVKYECEDKYG----------KVEFIKVEKDSQ 579
Query: 328 VNLWCR 333
++ +
Sbjct: 580 GEIYVK 585
>gi|323507689|emb|CBQ67560.1| related to RNA-binding region containing protein 2 [Sporisorium
reilianum SRZ2]
Length = 659
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/364 (36%), Positives = 182/364 (50%), Gaps = 75/364 (20%)
Query: 10 SPE--ERDARTIFCMQLSQRIRTRDLEEFFSS---VGKVRDVRLITCNKTRRFKGIAYIE 64
SPE + + R++FC QLS R+ RDL EFF G V+DVR++ TRR KG+ Y+E
Sbjct: 246 SPEIDDYEERSVFCSQLSARLGQRDLGEFFEDHLGEGAVQDVRIVMDRVTRRSKGVGYVE 305
Query: 65 FKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKN------------RAGNT------LPNL 106
F E VP A+ L G L GIPI+VQ T A N R G+ P L
Sbjct: 306 FAARELVPKAIELTGTILFGIPIVVQRTDAAHNGGVYQGSGDAGARHGSAPHPAVAAPQL 365
Query: 107 QPR------------GTGGPM-----------------------RLYIGSLHFNITEDML 131
PR G P+ RLY+GSLHF++T++ +
Sbjct: 366 DPRVLANAPLPMQYHTAGAPIHLGAAPQAPRAPRPGPNMPNTEARLYVGSLHFSLTDENV 425
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTV 191
+ +FEPFG+I+ + L +P TG+SKG+ FI F +DAKKA EQ+NGF LA R ++VG V
Sbjct: 426 KAVFEPFGEIEYVDLHREPGTGKSKGFCFIQFKYPEDAKKALEQMNGFVLAERAIRVGNV 485
Query: 192 TDRNESVGGGPSNLDTDEMERAGVDLGATGRL-QLMFKLAEGTGLELPPAAASAL--NLA 248
+ S + +G D G L QL +G G L P +AL LA
Sbjct: 486 NAKG-------SGGGSSYSSGSGQDSQGDGHLPQLTSAFDDGGGAGLNPERRAALMEKLA 538
Query: 249 QNAILNSSTPQVSS------STAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECN 302
+N ++S +V++ + P + LL NMF+PA ET P WD ++ +DV EEC
Sbjct: 539 RNNEPSASASEVTTVAQERPAGIPESTSTSLLLKNMFNPAEETEPDWDTDLAEDVKEECQ 598
Query: 303 -KHG 305
K+G
Sbjct: 599 AKYG 602
>gi|67517282|ref|XP_658521.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|40746790|gb|EAA65946.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|259488796|tpe|CBF88530.1| TPA: RNA splicing factor (Pad-1), putative (AFU_orthologue;
AFUA_1G15810) [Aspergillus nidulans FGSC A4]
Length = 552
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 193/379 (50%), Gaps = 74/379 (19%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
S +L+ +ERD RTIF QL+ R+RT++L FF VG V++ +++ + R KG+ Y+EF
Sbjct: 163 SPELNEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 222
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNR-AGNTLPNLQPRGTGGPMRLYIGSLHF 124
KD SV A+ L GQKLLGIPII Q T+AEKNR A N+ + + + RLY+G++HF
Sbjct: 223 KDESSVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNSEASSGNKHSAPFHRLYVGNIHF 282
Query: 125 NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
+I E+ L+ +FEPFG+++ +QL D +TGRS+GYGF+ F + A++A E++NG++L GR
Sbjct: 283 SIDENDLQSVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKMNGYDLGGR 341
Query: 185 PMKVGTVTDR--------------NES---------------VGGGPSNLDT-------- 207
++VG D+ N+S GG SN D
Sbjct: 342 AIRVGLGNDKFTPENTQRTQSQSANQSNFQGSMFSGSGGRGVQAGGTSNFDRAGGREPEK 401
Query: 208 -------DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQV 260
D+ + AGV+ R LM KLA PA SA + Q +L + P+
Sbjct: 402 GTAASALDDTDVAGVNFNNFSRDALMRKLARTD----EPAEPSADDKQQKILLPKTEPKP 457
Query: 261 SSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHGVGASTVCFIYSVIF 319
L N+ + E +W E+ DDV EC K+G V+
Sbjct: 458 -------------LPVNVNMASREEGESWVKELEDDVRAECEEKYG----------HVVH 494
Query: 320 LKLWSYVQVNLWCRHARKQ 338
+ L Q +++ + R Q
Sbjct: 495 IALDPNSQGDIYLKFDRVQ 513
>gi|223949785|gb|ACN28976.1| unknown [Zea mays]
gi|413957028|gb|AFW89677.1| hypothetical protein ZEAMMB73_900995 [Zea mays]
Length = 411
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 141/219 (64%), Gaps = 7/219 (3%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F QLS + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 161 ERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVP 220
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
+A+ L+GQ LLG ++V+P++AEKN + + G +LY+G+LH NI ED LR
Sbjct: 221 MAIALSGQLLLGQQVMVKPSEAEKNLVQSNASSGAASGG--ARKLYVGNLHSNINEDQLR 278
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKVGTV 191
+FEPFG+++ +QL +DP +G KG+GF+ F +DAK AQ LNG E+AGR +KV V
Sbjct: 279 QVFEPFGQVELVQLPLDPLSGLCKGFGFVQFARLEDAKAAQ-SLNGQLEIAGRVIKVSAV 337
Query: 192 TDR-NESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL 229
TD+ V G +LD +E G+ L A+ R LM KL
Sbjct: 338 TDQAGMQVSGATGDLDDEEA--GGLALNASSRALLMQKL 374
>gi|413957027|gb|AFW89676.1| hypothetical protein ZEAMMB73_900995 [Zea mays]
Length = 396
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 141/219 (64%), Gaps = 7/219 (3%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F QLS + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 161 ERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVP 220
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
+A+ L+GQ LLG ++V+P++AEKN + + G +LY+G+LH NI ED LR
Sbjct: 221 MAIALSGQLLLGQQVMVKPSEAEKNLVQSNASSGAASGG--ARKLYVGNLHSNINEDQLR 278
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKVGTV 191
+FEPFG+++ +QL +DP +G KG+GF+ F +DAK AQ LNG E+AGR +KV V
Sbjct: 279 QVFEPFGQVELVQLPLDPLSGLCKGFGFVQFARLEDAKAAQ-SLNGQLEIAGRVIKVSAV 337
Query: 192 TDR-NESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL 229
TD+ V G +LD +E G+ L A+ R LM KL
Sbjct: 338 TDQAGMQVSGATGDLDDEEA--GGLALNASSRALLMQKL 374
>gi|255082273|ref|XP_002508355.1| predicted protein [Micromonas sp. RCC299]
gi|226523631|gb|ACO69613.1| predicted protein [Micromonas sp. RCC299]
Length = 518
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 175/354 (49%), Gaps = 50/354 (14%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+L +RD RT+F LS + RD+ +FFS G V DVR+I T R KG+AYIEF D
Sbjct: 127 ELEKLDRDTRTVFAYNLSTKADERDIYQFFSKAGTVNDVRIIYDRNTPRSKGMAYIEFAD 186
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKN---RAGNTLPNLQPRGTG------------ 112
++ A+ L GQ L ++V+ ++AEKN A L+ + G
Sbjct: 187 KANITDALALTGQMLRNQVVMVKASEAEKNIAWEAEQAQKKLEMKALGATDPASAAAAVN 246
Query: 113 ------GPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSA 166
GP +L + L NI E L+ +FEPFG+ D I + D TGRS+G GF+ +
Sbjct: 247 AQAHGNGPCKLQVHGLDVNIGETDLKAVFEPFGETDFISIQRDS-TGRSRGVGFVQYKQT 305
Query: 167 DDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGG-PSNLDTDEM-ERAGVDLGATGRLQ 224
A A QLNG EL G+ +KV ++ +++ TD++ E+ GV L + R
Sbjct: 306 QHAVLAISQLNGLELVGQSLKVTMAPIAASTLNAAQAASMVTDKIDEQEGVRLDSRSRAA 365
Query: 225 LMFKLA-----EG----------TGLELPPAAASALNLAQNAILNSSTPQVSSSTAP--P 267
LM KLA +G TGL P +A + AQ A + P P
Sbjct: 366 LMAKLAGQDETQGALYSGGIDPKTGL---PVSAEEMAAAQRAAHMTEVEFAQGVLGPASP 422
Query: 268 IATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
I TQC LL NMFDPA ET P W ++I +DV +EC+KHG V + F+Y
Sbjct: 423 IPTQCLLLKNMFDPAEETEPEWWIDIGEDVKDECSKHGPVSHIHVDKESRGFVY 476
>gi|452002199|gb|EMD94657.1| hypothetical protein COCHEDRAFT_1092247 [Cochliobolus
heterostrophus C5]
Length = 572
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 127/351 (36%), Positives = 171/351 (48%), Gaps = 68/351 (19%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+++ ++RD RTIF Q+SQR TR L FF VG V + +++ T R KG+ Y+EFKD
Sbjct: 169 EITEDDRDKRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVKDRVTGRSKGVGYVEFKD 228
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGN-TLPNLQPRGTGGPM-RLYIGSLHFN 125
ESVP A+ L GQKL G+PII Q T+AEKNRA + P G P RLY+G++HF+
Sbjct: 229 EESVPQALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGTAPGANGAPFHRLYVGNIHFS 288
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDP-DTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
+TE L+ IFEPFG+++ + L D + GRSKGYGF+ F AK A ++NGFELAGR
Sbjct: 289 VTEKDLQEIFEPFGELEQVILQRDEMNPGRSKGYGFVQFVDPSHAKNALAEMNGFELAGR 348
Query: 185 PMKVG--------------------------------------------TVTDRNES--- 197
++VG V DR S
Sbjct: 349 QIRVGLGNDKFTPESTANLLRTFSQQAQSYQGSAFSGAGGRGAYAGGSGGVFDRTHSKDD 408
Query: 198 --VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNS 255
V G + DTD AGV+ R +LM LA E AQ +
Sbjct: 409 RGVSGASALDDTD---VAGVNFKTYDRSKLMDALARRDNPEPTKQG------AQPVVSKP 459
Query: 256 STPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRD---DVIEECNK 303
P V P+A++C + N FDP E D ++D +V EC+K
Sbjct: 460 RVPVVDK----PMASKCIKIENAFDPDEEQRNWGDNWVKDLELEVKSECDK 506
>gi|334362319|gb|AEG78359.1| RNA binding motif protein 39 [Epinephelus coioides]
Length = 238
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 117/165 (70%), Gaps = 11/165 (6%)
Query: 151 DTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEM 210
+TGRSKGYGFI+F A+ AKKA EQLNGFELAGRPMKVG VT+R++S S LD DE+
Sbjct: 3 ETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKVGHVTERSDS-STASSFLDNDEL 61
Query: 211 ERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNS----------STPQV 260
ER G+DLG TGRLQLM +LAEGTGL++PPAA AL + + + + Q
Sbjct: 62 ERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQMTGSIPFGNIAAPPAVPTPAPSQA 121
Query: 261 SSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
+ + P+AT C L+N+F+P E +P+W +EI+DDVIEECNKHG
Sbjct: 122 LNLPSQPLATHCLQLSNLFNPQAENDPSWAIEIQDDVIEECNKHG 166
>gi|325187692|emb|CCA22234.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 423
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 178/346 (51%), Gaps = 56/346 (16%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPL 73
RD RT+F QL+Q++R RDLE++F+ VGK V LI T R KG AY+E + E VP
Sbjct: 5 RDHRTVFIGQLTQKVRERDLEKYFNKVGKTEHVLLIRDKFTNRSKGFAYVEMSNLEDVPK 64
Query: 74 AMGLNGQ--KLLGIPIIVQPTQAEKNRAG-------NTLPN---LQPRGTGGP------- 114
+ LNGQ + P++++ ++AEKN A +T+ + L + GP
Sbjct: 65 VLLLNGQIPEFQIFPVMIKASEAEKNFAAKKDTVMSSTMRSSDWLNSSESNGPNSALAAA 124
Query: 115 --------------MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGF 160
R+Y G+LH N+TED LR +F FG++ ++ + D + GRSKGYGF
Sbjct: 125 IASSMSSGGSLSAASRIYCGNLHTNVTEDHLRVVFHSFGEVVSVNINRD-EMGRSKGYGF 183
Query: 161 ITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGG----------GPSNLDTDEM 210
I F + +A A + NG EL G +++G V + N +GG G D+
Sbjct: 184 IQFGTPQEANLALSKGNGLELHGNFLRLGPVNE-NAGLGGMGMGSFSTMDGSHMWKLDDD 242
Query: 211 ERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL--NLAQNAILNSSTPQ------VSS 262
E AG+ L + R LM KLA G + PA+ S++ N+ N+ S Q ++S
Sbjct: 243 EGAGMALNSQSRTALMAKLAGGKDIFPNPASGSSMYTNVGSNSYGKSEISQTERAAALAS 302
Query: 263 STAPPIATQCFLLANMFDPATET---NPTWDVEIRDDVIEECNKHG 305
+ + CF++ NMFD E NP W +EI++DV+EEC G
Sbjct: 303 EKIEGVPSFCFVVKNMFDAQAEKRTGNPDWHLEIQEDVVEECESFG 348
>gi|224080644|ref|XP_002306193.1| predicted protein [Populus trichocarpa]
gi|222849157|gb|EEE86704.1| predicted protein [Populus trichocarpa]
Length = 348
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/303 (39%), Positives = 168/303 (55%), Gaps = 44/303 (14%)
Query: 54 TRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLP----NLQPR 109
+RR KG+ YIEF D SVP+A+ L+GQ LLG P++V+P++AEKN +T L
Sbjct: 5 SRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSTTAVTSGGLTGP 64
Query: 110 GTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDA 169
+GG RLY+G+LHFNITED LR +FEPFG ++ +QL D ++G KG+GF+ F +DA
Sbjct: 65 YSGGARRLYVGNLHFNITEDQLRQVFEPFGAVELVQLPHD-ESGHCKGFGFVQFARLEDA 123
Query: 170 KKAQEQLNG-FELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFK 228
+ A LNG E+AGRP+KV VTD+ + GG + D D+ E G+ L A R LM K
Sbjct: 124 RNAL-NLNGQVEIAGRPIKVSAVTDQTGTQDGGTNVGDFDDDEGGGLALNARSRALLMQK 182
Query: 229 LAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIA------------------- 269
L + TG A + A + +TP VS + AP ++
Sbjct: 183 L-DRTGTASSIAGSLGTPTLPTAPILGATPVVSPAVAPLLSGSVPAIPGLPVPGLQLPAT 241
Query: 270 -----------TQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG------VGASTVC 312
+ C L NMFDP TET P +D++I++DV EEC++ G V ++
Sbjct: 242 AIPTMDTIGVPSDCLFLKNMFDPKTETEPDFDLDIKEDVQEECSRFGNVKHIYVDKNSAG 301
Query: 313 FIY 315
F+Y
Sbjct: 302 FVY 304
>gi|443896055|dbj|GAC73399.1| transcriptional coactivator CAPER [Pseudozyma antarctica T-34]
Length = 662
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/374 (34%), Positives = 176/374 (47%), Gaps = 99/374 (26%)
Query: 10 SPEERDA--RTIFCMQLSQRIRTRDLEEFFSS---VGKVRDVRLITCNKTRRFKGIAYIE 64
SPE D R++FC QLS R+ RDL EFF G V+DVR++ TRR KG+ Y+E
Sbjct: 253 SPEINDYEDRSVFCSQLSARLGQRDLGEFFEEHLGEGAVQDVRIVMDRVTRRSKGVGYVE 312
Query: 65 FKDPESVPLAMGLNGQKLLG---------------------------------------- 84
F E VP A+ L G+ L G
Sbjct: 313 FAARELVPKAIELTGKVLFGIPIVVQRTDAGRNGPPPISAVAPHGVASHPALGGPHLDAR 372
Query: 85 ----IPIIVQPTQA--------------EKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+P+ +Q QA R G +PN + RLY+GSLHF++
Sbjct: 373 ALANVPMPMQYHQAGVPIHLNVNAPPGPRAMRPGPNMPNTE-------ARLYVGSLHFSL 425
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
T++ ++ +FEPFG+I+ + L +P TG+SKG+ FI F ADDA+KA E +NGFELAGR +
Sbjct: 426 TDENVKAVFEPFGEIEYVDLHREPGTGKSKGFCFIQFKHADDARKAHEAMNGFELAGRAI 485
Query: 187 KVGTVTDR--NESVGGGPSNLDTDEMERAGVDLGATGRL-QLMFKLAEGTGLELPPAAAS 243
+VG V + S GGP G + + G L QL +G G L P +
Sbjct: 486 RVGNVNAKGSGSSYMGGP-----------GPNSQSGGHLPQLTSAFDDGGGAGLNPERRA 534
Query: 244 AL--NLAQNAILNSSTPQVSSSTA---------PPIATQCFLLANMFDPATETNPTWDVE 292
AL LA+N N +P S + P + LL NMFDPA ET WD +
Sbjct: 535 ALMQKLARN---NEPSPAASDANTATQERPAGIPEATSTSLLLKNMFDPAEETEADWDKD 591
Query: 293 IRDDVIEECN-KHG 305
+ +DV +EC K+G
Sbjct: 592 LAEDVKDECQAKYG 605
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 117/185 (63%), Gaps = 4/185 (2%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
+RD RT+F L R +L EFF GKV D+RLIT +R+ KG YIE+ D SVP
Sbjct: 165 DRDERTVFASNLPIRASESELFEFFGKAGKVHDIRLITDRNSRKSKGFGYIEYLDKSSVP 224
Query: 73 LAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQ---PRGTGGPMRLYIGSLHFNITE 128
LA+ LNG + G ++VQ TQAEKNRA P P RLY+G+LH ++ E
Sbjct: 225 LALHQLNGTQCKGQTVLVQITQAEKNRAAAAAAAAAANAPPSLSAPTRLYVGNLHTDLAE 284
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
D LR +FEPFG I I L +DP+TGRSKG+ F+ + S +DAKKA + NG ELAGR +KV
Sbjct: 285 DDLRTVFEPFGDIQQINLHIDPETGRSKGFAFVQYKSPEDAKKALQHCNGMELAGRQLKV 344
Query: 189 GTVTD 193
G V+D
Sbjct: 345 GIVSD 349
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 266 PPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
P +A+ LL NMFDPA ET P + ++I++DV EEC+K+G
Sbjct: 496 PVVASAFMLLKNMFDPAQETEPNFHLDIQEDVTEECSKYG 535
>gi|451845251|gb|EMD58564.1| hypothetical protein COCSADRAFT_103344 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 168/351 (47%), Gaps = 68/351 (19%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+++ ++RD RTIF Q+SQR TR L FF VG V + +++ T R KG+ Y+EFKD
Sbjct: 166 EVTEDDRDKRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVKDRVTGRSKGVGYVEFKD 225
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAG--NTLPNLQPRGTGGPMRLYIGSLHFN 125
ESVP A+ L GQKL G+PII Q T+AEKNRA + RLY+G++HF+
Sbjct: 226 EESVPQALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGAAPGANGAPFHRLYVGNIHFS 285
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDP-DTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
+TE L+ IFEPFG+++ + L D + GRSKGYGF+ F AK A ++NGFELAGR
Sbjct: 286 VTEKDLQEIFEPFGELEQVILQRDEMNPGRSKGYGFVQFVDPSHAKNALAEMNGFELAGR 345
Query: 185 PMKVG--------------------------------------------TVTDRNES--- 197
++VG V DR S
Sbjct: 346 QIRVGLGNDKFTPESTANLLRTFSQQAQSYQGSAFSGAGGRGAYAGGSGGVFDRTHSKDD 405
Query: 198 --VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNS 255
V G + DTD AGV+ R +LM LA E AQ +
Sbjct: 406 RGVSGASALDDTDV---AGVNFKTYDRSKLMDALARRDNPEPTKQG------AQPVVSKP 456
Query: 256 STPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRD---DVIEECNK 303
P V P+A++C + N FDP E D ++D +V EC+K
Sbjct: 457 RVPVVDK----PMASKCIKIENAFDPDEEQRNWGDNWVKDLELEVKSECDK 503
>gi|331242735|ref|XP_003334013.1| RNA-binding protein rsd1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 546
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 135/222 (60%), Gaps = 38/222 (17%)
Query: 3 PAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSS-VGKVRDVRLITCNKTRRFKGIA 61
P +S L+ EE + R++F QLS R+ R+L +FF GKVRD RLIT +RR KG+
Sbjct: 278 PQFS--LTEEEHEMRSVFVSQLSARVGDRELFQFFEQQAGKVRDARLITDRISRRSKGVG 335
Query: 62 YIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAG--NTLPNLQP----------- 108
Y+EF++ ESV A+ L G KLLG+P++VQ T+AEKNR NT PN+ P
Sbjct: 336 YVEFRELESVQKALALTGTKLLGLPVMVQYTEAEKNRQAMANTQPNVPPGFVATAPPPPV 395
Query: 109 ---------RGTG-------GP------MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQL 146
RG+ GP RLY+GSL+FN+T+D +R +F+PFG I+ + L
Sbjct: 396 PRPYVAPKARGSAYELNRGPGPNDPNSYARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDL 455
Query: 147 MVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
D TG+SKGY F+ F + DAK A E++NGF+LAGR ++V
Sbjct: 456 HRDQITGKSKGYAFVQFKNMHDAKNAMEKMNGFQLAGRALRV 497
>gi|357464471|ref|XP_003602517.1| Splicing factor-like protein [Medicago truncatula]
gi|355491565|gb|AES72768.1| Splicing factor-like protein [Medicago truncatula]
Length = 731
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 160/293 (54%), Gaps = 38/293 (12%)
Query: 57 FKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRA-GNTLPNLQPRGTGGPM 115
F YIEF D SVP+A+ L+GQ LLG P++V+P++AEKN NT G GP
Sbjct: 399 FDCCRYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTTG--AAGVVGPY 456
Query: 116 -----RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAK 170
+LY+G+LHFN+TE LR IFEPFG ++ +QL +D +TG KG+GFI F + AK
Sbjct: 457 GAVDRKLYVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHIEHAK 516
Query: 171 KAQEQLNG-FELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL 229
AQ LNG E+AGR +KV +V D S + D D+ E G+ L A R LM KL
Sbjct: 517 AAQ-SLNGKLEIAGRTIKVSSVADHIGSQDTTTKSADFDDDE-GGLALNAQSRALLMQKL 574
Query: 230 -----AEGTGLEL----PPAAASALNLAQNAILNSS----------TPQVSSSTAPPIAT 270
GL + P A +L + +++ T + + A P+ T
Sbjct: 575 DRSGITASIGLPMNGLAPAQPAISLPIGNTGLIHPGLIPAPGLALPTQIMPTQVAEPVGT 634
Query: 271 --QCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
C LL NMFDP TET P +D++I++DV EEC+K+G V ++ F+Y
Sbjct: 635 PSNCLLLKNMFDPTTETEPDFDLDIKEDVEEECSKYGRVKHIYVDKNSAGFVY 687
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 32/48 (66%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGI 60
ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+
Sbjct: 211 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGV 258
>gi|169599154|ref|XP_001793000.1| hypothetical protein SNOG_02393 [Phaeosphaeria nodorum SN15]
gi|160704547|gb|EAT90605.2| hypothetical protein SNOG_02393 [Phaeosphaeria nodorum SN15]
Length = 544
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/359 (34%), Positives = 172/359 (47%), Gaps = 70/359 (19%)
Query: 3 PAYSDDLSPE----ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
P + +SPE +RD RTIF Q+SQR T L FF +VG V + +++ T R K
Sbjct: 132 PRHGKTVSPEVTEDDRDKRTIFVQQISQRALTHHLLAFFETVGPVIEAQIVKDRVTGRSK 191
Query: 59 GIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAG--NTLPNLQPRGTGGPMR 116
G+ Y+EFKD ESV A+ L GQKL G+PII Q T+AEKNRA + R
Sbjct: 192 GVGYVEFKDEESVAKALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGAAPGANGAPFHR 251
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDP-DTGRSKGYGFITFHSADDAKKAQEQ 175
LY+G++HF++TE L IF PFG+++ + L D + RSKGYGF+ F AK+A +
Sbjct: 252 LYVGNIHFSVTEQDLHTIFAPFGELEQVTLQRDETNPARSKGYGFVQFVDPTKAKEALAE 311
Query: 176 LNGFELAGRPMKVG--------------------------------------------TV 191
+NGFELAGR ++VG V
Sbjct: 312 MNGFELAGRQIRVGLGNDKFTPESTASLLRTFNQQAQSYQGSAFSGAGGRGAYAGGTGGV 371
Query: 192 TDRNESVG----GGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL 247
DR S G S LD ++ AGV+ R +LM LA G P AAA +
Sbjct: 372 FDRTHSKDDRGVSGASALDDSDV--AGVNFKTYDRSKLMNALARRDG---PEAAA---QI 423
Query: 248 AQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETN---PTWDVEIRDDVIEECNK 303
A+ + P V P+A++C + N FD E P+W ++ +V EC+K
Sbjct: 424 ARPVVSKPRDPIVDK----PMASKCIKIENAFDADQELQQFGPSWVKDLEGEVKLECDK 478
>gi|224103159|ref|XP_002312948.1| predicted protein [Populus trichocarpa]
gi|222849356|gb|EEE86903.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/213 (49%), Positives = 136/213 (63%), Gaps = 7/213 (3%)
Query: 22 MQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQK 81
M L + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP+A+ L+GQ
Sbjct: 1 MALGLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQP 60
Query: 82 LLGIPIIVQPTQAEKNRAGNTLP----NLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
LLG P++V+P++AEKN +T L TGG RLYIG+LHFNITED LR +FEP
Sbjct: 61 LLGQPVMVKPSEAEKNLVQSTTAVASGGLIGPYTGGARRLYIGNLHFNITEDQLRQVFEP 120
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKVGTVTDRNE 196
FG ++ +QL D + G KG+GF+ F +DA+ A LNG E+AGRP+KV VTD+
Sbjct: 121 FGAVELVQLPHD-EGGHCKGFGFVQFARLEDARNALN-LNGQVEIAGRPIKVSAVTDQAG 178
Query: 197 SVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL 229
+ GG + D D+ E G+ L A R LM KL
Sbjct: 179 AQDGGTNVGDFDDDEGGGLALNARSRALLMQKL 211
>gi|226509668|ref|NP_001142242.1| uncharacterized protein LOC100274411 [Zea mays]
gi|194690874|gb|ACF79521.1| unknown [Zea mays]
gi|194707772|gb|ACF87970.1| unknown [Zea mays]
gi|414871307|tpg|DAA49864.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
gi|414871308|tpg|DAA49865.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
Length = 318
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 156/280 (55%), Gaps = 40/280 (14%)
Query: 70 SVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITED 129
SVP+A+ L+GQ LLG ++V+P++AEKN + + +GG +LY+G+LH NITED
Sbjct: 2 SVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATS-GGAASGGARKLYVGNLHSNITED 60
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKV 188
LR +FEPFG+++ +QL VDP TG KGYGFI F +DAK AQ LNG ++AGR +KV
Sbjct: 61 QLRQVFEPFGQVELVQLPVDPMTGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGRVIKV 119
Query: 189 GTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL------------------- 229
VTD G + D D+ E G+ L A+ R LM KL
Sbjct: 120 SAVTDHVGMQASGATTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSLTRGIGAAGVA 179
Query: 230 --------AEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDP 281
A G LPP A+ ++ +L +T V+ ST T+ LL NMFDP
Sbjct: 180 VPATSVIGAPGAASLLPPTVAAVGSVPGAPVLPVTTQNVTMST----PTEFLLLKNMFDP 235
Query: 282 ATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
A ET+P +D++IRDDV +EC+K G V +T F+Y
Sbjct: 236 ALETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVY 275
>gi|361128675|gb|EHL00605.1| putative RNA-binding protein rsd1 [Glarea lozoyensis 74030]
Length = 694
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 165/320 (51%), Gaps = 55/320 (17%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +ERD RT+F QL+ R+RTRDL FF VG V++ +++ + R KG+ Y+EFK+
Sbjct: 341 LTEDERDRRTVFVQQLAARLRTRDLIGFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNE 400
Query: 69 ESVPLAMGLNGQKLLGIPIIVQPTQAEKNR------AGNTLPNLQPRGTGGPMRLYIGSL 122
ESVP A+ L GQKLLGIPII Q T+AEKNR A + PN P RLY
Sbjct: 401 ESVPAAIQLTGQKLLGIPIIAQLTEAEKNRQVRNPEAAGSNPNSIPF-----HRLY---- 451
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
+FEPFG+++ +QL + + GRS+GYGF+ F + A++A E++NGF+LA
Sbjct: 452 ----------NVFEPFGELEFVQLQKE-EQGRSRGYGFVQFRDPNQAREALEKMNGFDLA 500
Query: 183 GRPMKVGTVTDR--NESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPA 240
GRP++VG D+ ES ++R F A G G P
Sbjct: 501 GRPIRVGLGNDKFTPESTAS--------LLQRFQGQSHQQQFQGSAFSGAGGRG----PQ 548
Query: 241 AASALNL-----------AQNAILNSSTPQVSSSTAPP---IATQCFLLANMFDPATETN 286
AA+ N A A T S PP +A++C +L +MFDP + N
Sbjct: 549 AANGSNFDRAGGRDNDKSAGGASALDDTDVGESKPLPPGVNMASRCVVLKHMFDPTGQDN 608
Query: 287 PTWDVEIRDDVIEECN-KHG 305
W E+ D+V E K+G
Sbjct: 609 DDWIKELEDEVRAEAEAKYG 628
>gi|414871306|tpg|DAA49863.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
Length = 357
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 157/286 (54%), Gaps = 34/286 (11%)
Query: 70 SVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITED 129
SVP+A+ L+GQ LLG ++V+P++AEKN + + +GG +LY+G+LH NITED
Sbjct: 2 SVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATS-GGAASGGARKLYVGNLHSNITED 60
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKV 188
LR +FEPFG+++ +QL VDP TG KGYGFI F +DAK AQ LNG ++AGR +KV
Sbjct: 61 QLRQVFEPFGQVELVQLPVDPMTGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGRVIKV 119
Query: 189 GTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL------------------- 229
VTD G + D D+ E G+ L A+ R LM KL
Sbjct: 120 SAVTDHVGMQASGATTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSLTRGIGAAGVA 179
Query: 230 --------AEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDP 281
A G LPP A+ ++ +L +T V+ ST T+ LL NMFDP
Sbjct: 180 VPATSVIGAPGAASLLPPTVAAVGSVPGAPVLPVTTQNVTMST----PTEFLLLKNMFDP 235
Query: 282 ATETNPTWDVEIRDDVIEECNKHGVGASTVCFIYSVIFLKLWSYVQ 327
A ET+P +D++IRDDV +EC+K G IFLK S ++
Sbjct: 236 ALETDPDFDLDIRDDVQDECSKFGAVKHIFVDKCYYIFLKTGSTLE 281
>gi|62320860|dbj|BAD93824.1| splicing factor-like protein [Arabidopsis thaliana]
Length = 308
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/271 (40%), Positives = 158/271 (58%), Gaps = 31/271 (11%)
Query: 70 SVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM--RLYIGSLHFNIT 127
SVP+A+ L+GQ LG P++V+P++AEKN A + N G GP +LY+G+LHFN++
Sbjct: 2 SVPMAIALSGQLFLGQPVMVKPSEAEKNLAQS---NSTTVGGTGPADRKLYVGNLHFNMS 58
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPM 186
E LR IFE FG ++ +QL +DP+TG+ KG+GFI F + +K AQ LNG E+AGR +
Sbjct: 59 ELQLRQIFEAFGPVELVQLPLDPETGQCKGFGFIQFVQLEHSKAAQIALNGKLEIAGRTI 118
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEG-------TGLELPP 239
KV +V+D + P + D D+ + G+ L A R LM KL L +P
Sbjct: 119 KVSSVSDHIGTQDSAPKSADFDDDDGGGLALNAQSRAMLMQKLDRSGIATSIVGSLGVPG 178
Query: 240 AAASALNLAQNAILNSSTP-QVSSSTAPP--------IATQCFLLANMFDPATETNPTWD 290
+A N +N S P V +TA P + ++C LL NMFDPATET P +D
Sbjct: 179 LNGAAFN---QPGMNPSFPTSVLPTTAIPSFVNEHVGLPSECLLLKNMFDPATETEPNFD 235
Query: 291 VEIRDDVIEECNKHG------VGASTVCFIY 315
+EIRDDV +EC+K+G V ++ F+Y
Sbjct: 236 LEIRDDVADECSKYGPVNHIYVDKNSAGFVY 266
>gi|348674007|gb|EGZ13826.1| hypothetical protein PHYSODRAFT_249442 [Phytophthora sojae]
Length = 413
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 169/340 (49%), Gaps = 52/340 (15%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPL 73
RD RT+F QL+Q++R +DLE F S GKV +V LI T R KG AY+E + E VP
Sbjct: 5 RDHRTVFVGQLTQKVREKDLERFLSKTGKVENVLLIRDKFTNRSKGFAYVELSNLEDVPK 64
Query: 74 AMGLNGQ--KLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM---------------- 115
+ LNGQ PI+++ ++AEKN A + + P+
Sbjct: 65 VLLLNGQVPDFQVFPIMIKASEAEKNFAAKKDSVMNAAASTAPLTADAPGMSASALSAAS 124
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y G+LH NITED LR +F+ FG++ ++ + D + GRSKG+ FI F S +A A +
Sbjct: 125 RIYCGNLHTNITEDDLRIVFQSFGEVLSVTINRD-EMGRSKGFSFIQFSSPQEANFALSK 183
Query: 176 LNGFELAGRPMKVGTVTDRNESVG-----------------GGPSNLDTDEMERAGVDLG 218
NG ELAG +++G V + + G GG L+ D E G+ +
Sbjct: 184 GNGLELAGNYLRLGPVNENAMNGGNRGMAGAGGSGADNGASGGRWKLEDD--EGTGLSMN 241
Query: 219 ATGRLQLMFKLAEGTGLEL----PPAAASALNLAQNAILNSSTPQ------VSSSTAPPI 268
A R LM KLA G + L PAAAS + ++ +SS+
Sbjct: 242 AQSRSALMAKLA-GNDVNLFPTRYPAAASTTDYTNTMAATAAQRAEQAAALMSSTEIEGS 300
Query: 269 ATQCFLLANMFDPATET---NPTWDVEIRDDVIEECNKHG 305
+ CF++ NMFD E NP W VEI+ DV EEC ++G
Sbjct: 301 ESFCFVVKNMFDVYQEQKSGNPEWAVEIQQDVEEECGQYG 340
>gi|302852020|ref|XP_002957532.1| hypothetical protein VOLCADRAFT_84128 [Volvox carteri f.
nagariensis]
gi|300257174|gb|EFJ41426.1| hypothetical protein VOLCADRAFT_84128 [Volvox carteri f.
nagariensis]
Length = 386
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 173/332 (52%), Gaps = 44/332 (13%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ER RT F L+ + RD+ + FS VGKV D++LIT T+R KG AYIEF E V
Sbjct: 2 ERSTRTAFAYNLNLKADERDIYQLFSKVGKVVDIKLITDKTTKRSKGFAYIEFSKVEEVI 61
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKN-------------RAGNTLPN-LQPRGTGGPMRLY 118
A+ L G +G I+V+ ++ EKN AG T PN P GP +LY
Sbjct: 62 AAVALTGTVFMGQAIMVKSSEHEKNLAWVSTYLASLLGAAGVTGPNDTLPV---GPCKLY 118
Query: 119 IGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
+ +L+ I E ++ +F PFG+IDN+QL+ D TGRS+GYG++T+ + DA KA E NG
Sbjct: 119 VANLNAAIAEADVQQLFAPFGQIDNVQLVRDA-TGRSQGYGYVTYANVLDATKAVEHWNG 177
Query: 179 FELAGRPMKVGTVTDRNESV---GGGPSNL-------DTDEME-RAGVDLGATGRLQLMF 227
+AG +KV +V+ + + G + L + DE E R G+ L + R LM
Sbjct: 178 RVVAGSALKV-SVSSKGSCIRFFGITRTVLLLRCRVGELDEEEARGGLKLTSDRRQALMA 236
Query: 228 KLAEGTGLE-LPPA--------AASALNLAQNAILNSSTPQVSSSTAP--PIATQCFLLA 276
+LA GL+ + PA A A + L+ S + S P PI T C L+
Sbjct: 237 RLASSAGLQPVAPALPVPSVPALAVAPAVLAGPKLDPSLGLIQSVLGPASPIPTPCLLIK 296
Query: 277 NMFDPAT---ETNPTWDVEIRDDVIEECNKHG 305
NMFDPA E W EI DV +EC+K+G
Sbjct: 297 NMFDPAAAQEEMGQDWAEEIAQDVQDECSKYG 328
>gi|396488840|ref|XP_003842956.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
gi|312219534|emb|CBX99477.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
Length = 590
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 162/324 (50%), Gaps = 64/324 (19%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+++ ++RD RTIF Q+SQR TR L FF +VG V + +++ T R KG+ Y+EFK+
Sbjct: 171 EVTEDDRDKRTIFVQQISQRAETRHLRSFFETVGPVVEAQIVKDRVTGRSKGVGYVEFKE 230
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAG--NTLPNLQPRGTGGPMRLYIGSLHFN 125
ESVP A+ L GQKL G+PII Q T+AEKNRA + RLY+G++HF+
Sbjct: 231 EESVPKALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGAAPGANGAPFHRLYVGNIHFS 290
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDP-DTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
+TE L+ IFEP+G+++ + L D + GRSKGYGF+ F AK A ++NGFELAGR
Sbjct: 291 VTEKDLQEIFEPYGELEQVILQRDELNPGRSKGYGFVQFVDPTHAKDALAEMNGFELAGR 350
Query: 185 PMKVG----------------TVTDRNESVGG---------------------------- 200
++VG T T + +S G
Sbjct: 351 QIRVGLGNDKFTPESTANLLRTFTQQAQSYQGSAFSGAGGRGAYAGGSGGIFDRTHSKDD 410
Query: 201 ----GPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSS 256
G S LD ++ AGV+ R +LM LA G E+ A + AQ +
Sbjct: 411 RGVSGASALDDTDV--AGVNFKTYDRSKLMDALARRDGPEV------AKHGAQPVVSKPR 462
Query: 257 TPQVSSSTAPPIATQCFLLANMFD 280
P V +A++C + N FD
Sbjct: 463 VPVVDR-----MASKCIKIENAFD 481
>gi|313230893|emb|CBY18890.1| unnamed protein product [Oikopleura dioica]
Length = 492
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 164/317 (51%), Gaps = 32/317 (10%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+LS ERDART+ MQL+ IR DL++FFSSVG VR V+LI ++ + +G+AYIEFK
Sbjct: 121 ELSARERDARTVIAMQLAHAIREFDLKDFFSSVGDVRAVKLIK-DERHKTQGLAYIEFKH 179
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTL----PNLQPRGTGGPMRLYIGSLH 123
+SVPLAMGL GQ++LG I+V QA+KNR L NL GTG P ++ + LH
Sbjct: 180 VQSVPLAMGLTGQRVLGRAIVVHHAQADKNRHSEKLEQAKKNLMKAGTG-PYKIRVDKLH 238
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+TE+ L+ I EPFG+++ +Q++ D TG S G F+TF + + A L+ F+L G
Sbjct: 239 KTVTEEQLKMIMEPFGRVEKVQIIKDGFTGGSSGTAFVTFVDCEGGEDAIRHLHNFDLGG 298
Query: 184 RPMKVGTVTDRNESVGGGPSNLDTDEMERA-GVDLGATGRLQLMFKLAEGTGLELPPAAA 242
+ + V G ++ A LG T Q K E G++ P +
Sbjct: 299 LNLILRLVAK-----GKAAREVENSHNPNAMKAMLGVTAAPQK--KAIE--GVQYTPVKS 349
Query: 243 SALN--LAQNAILNSSTPQ------------VSSSTAPPIATQCFLLANMFDPATETNPT 288
+ + N N ST ++ A PI+TQCF + N FD
Sbjct: 350 EGMQFFIVMNHDHNFSTAGSGYGNSKAALRLMARRQAAPISTQCFQIVNAFD--VNEKGK 407
Query: 289 WDVEIRDDVIEECNKHG 305
W +++ DVI+ + G
Sbjct: 408 WQDKVKKDVIQRVSNFG 424
>gi|330920965|ref|XP_003299224.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
gi|311327182|gb|EFQ92678.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
Length = 570
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/348 (34%), Positives = 165/348 (47%), Gaps = 63/348 (18%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+++ ++RD RTIF Q+SQR T L FF VG V + +++ T R KG+ Y+EFKD
Sbjct: 168 EVTEDDRDKRTIFVQQISQRAETHHLRTFFERVGPVIEAQIVKDRVTLRSKGVGYVEFKD 227
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM--RLYIGSLHFN 125
ESV A+ L GQKL G+PII Q +AEKNRA G G RLY+G++HF+
Sbjct: 228 EESVAKALELTGQKLKGVPIIAQLAEAEKNRAARPSEGGAAPGANGAPFHRLYVGNIHFS 287
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVD-PDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
+TE LR IFEPFG ++ + L D + GRSKGYGF+ F AK A ++NGFELAGR
Sbjct: 288 VTEGDLRDIFEPFGALEQVILQRDEANPGRSKGYGFVQFVDPAHAKNALAEMNGFELAGR 347
Query: 185 PMKVG----------------TVTDRNESVGGGP---------------SNLDT------ 207
++VG T + + +S G N D
Sbjct: 348 QIRVGLGNDKFTPESTANLLRTFSQQAQSYQGSAFSGAGGRGAYAGGSGGNFDRTHAKDD 407
Query: 208 ---------DEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTP 258
D+ + AGV+ R +LM LA E A +N + I++
Sbjct: 408 RGVSGASALDDTDVAGVNYKTYDRSKLMDALARRDNGEPARGAQPVINKPRAPIVDK--- 464
Query: 259 QVSSSTAPPIATQCFLLANMFDPATETN---PTWDVEIRDDVIEECNK 303
P+A++C + N FD E W E+ +V EC K
Sbjct: 465 --------PMASKCVKIENAFDADEEQRMIGNNWVKELEVEVKAECEK 504
>gi|78708721|gb|ABB47696.1| splicing factor, CC1-like family protein, expressed [Oryza sativa
Japonica Group]
gi|215695222|dbj|BAG90413.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 320
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 160/283 (56%), Gaps = 43/283 (15%)
Query: 70 SVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRG--TGGPMRLYIGSLHFNIT 127
SVP+A+ L GQ LLG ++V+P++AEKN + N+ G +GG +LY+G+LH NIT
Sbjct: 2 SVPMAIALTGQVLLGQQVMVKPSEAEKNLVQS---NVASGGIASGGARKLYVGNLHSNIT 58
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPM 186
ED LR +FEPFG+++ +QL VDP TG KG+GFI F +DAK AQ LNG ++AGR +
Sbjct: 59 EDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGFIQFARLEDAKAAQS-LNGQLDIAGRVI 117
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL----------------A 230
KV VT++ GG + D D+ E G+ L A+ R LM KL
Sbjct: 118 KVSAVTEQAGLQVGGATTGDLDDDEGGGLALNASSRAMLMRKLDRSGTATSITGGIGIPG 177
Query: 231 EGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIA------------TQCFLLANM 278
T +ELP A+ + L +++ + P + T P I T+ LL NM
Sbjct: 178 VNTSVELPSASVTGAPLPTTSLIQPTIPAI--GTVPGIQIPGTQSADIGSPTEFLLLKNM 235
Query: 279 FDPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
FDPA ET+P +D++I+DDV +EC+K G V +T F+Y
Sbjct: 236 FDPAVETDPDFDLDIKDDVQDECSKFGAVNHIFVDKNTAGFVY 278
>gi|145349966|ref|XP_001419396.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579627|gb|ABO97689.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 516
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 110/334 (32%), Positives = 167/334 (50%), Gaps = 39/334 (11%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+L +RD RT+F LS ++ R + +FFS VGKV DVR+I T + KG+AY+EF D
Sbjct: 126 ELEKLDRDTRTVFVTNLSTKLDERGIFKFFSKVGKVTDVRIIYDRNTPKSKGMAYVEFAD 185
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRA---------------GNTLPNLQPRGTG 112
+ + A+ L GQ+L G I V+ ++AEKN A G +P + +
Sbjct: 186 KKFIHPALELTGQELNGQAIAVKTSEAEKNIAWEAEQAQKKKLGASYGQGVPYI---ASA 242
Query: 113 GPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGY--GFITFHSADDAK 170
GP +L +G LH ++ED ++ +FEPFG++D I ++ D D G + + F+ F A
Sbjct: 243 GPCKLRVGGLHLGLSEDDVKAVFEPFGELDFISMIKDDDPGAAGKFASAFVQFKLTQHAM 302
Query: 171 KAQEQLNGFELAGRPMKVGT----VTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLM 226
A QLNG EL G P++V V ++ +L + G+ + + GR LM
Sbjct: 303 LALSQLNGLELVGIPIRVSIASQGVQAAASTMAAPVESLGELDEGSGGLRMDSRGRAALM 362
Query: 227 FKLA-------------EGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAP--PIATQ 271
+LA TGL A +++ A+ ++ P P PI T
Sbjct: 363 ARLAGQDKEIEKGFTIDPSTGLPTTADAVKPIDVPGEALPLAAQPITQGVLGPGSPIPTP 422
Query: 272 CFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
C LL N+F+ A ET+P W ++I +DV EC K G
Sbjct: 423 CILLKNLFNAAEETDPEWWLDIAEDVKGECEKFG 456
>gi|399218373|emb|CCF75260.1| unnamed protein product [Babesia microti strain RI]
Length = 485
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 169/310 (54%), Gaps = 28/310 (9%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSS-VGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG 76
T+ L +I R++ E FS GK+RD++L+ +T R KG+AY+EF +SV A+
Sbjct: 121 TVLVANLHMKITEREIYELFSDGAGKIRDIQLVRDQRTGRPKGVAYVEFYTNDSVIKALS 180
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSL---HFNITEDMLRG 133
++G LL PI V +QAEKNRA Q + P+RLY+G L NI+E+ LR
Sbjct: 181 MSGHFLLNQPIRVTASQAEKNRAAKASKEFQTNESEMPLRLYVGGLVDSLVNISENELRQ 240
Query: 134 IFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTD 193
+F PFG+I +++L DP TG+ KG+ FI + A +A++A ++GFE++GR +KV +D
Sbjct: 241 LFVPFGEILSVELHRDPFTGKPKGFAFIEYKRASEAREAMLAMDGFEISGRNIKVNLTSD 300
Query: 194 RN-------------ESVGGGPSNLDTDEMERAGVDL--GATGRLQLMFKLAEGTGLELP 238
+ + L+ ++ME DL GA +++LM +L +LP
Sbjct: 301 NRPNAYTALNGLNNAQKITNDLDRLEKEKMEEYDSDLMPGAVSKIELMKRLNRDG--DLP 358
Query: 239 PAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMF---DPATETNPTWDVEIRD 295
+ ++L+ A+ I S P S++ T+ +L+NMF DP +P + ++ +
Sbjct: 359 TSNKTSLDAAK-VIPGVSAPGNSATVG---VTENIVLSNMFSATDPQIMEDPEFFTDLVE 414
Query: 296 DVIEECNKHG 305
DV EC K+G
Sbjct: 415 DVKSECKKYG 424
>gi|82595543|ref|XP_725893.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23481068|gb|EAA17458.1| putative splicing factor [Plasmodium yoelii yoelii]
Length = 698
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 174/334 (52%), Gaps = 48/334 (14%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSV-GKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+RD T+ + L + RD+ EFFS V GKVRD++ I ++ + KG+AY+EF +SV
Sbjct: 314 KRDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQDSV 373
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLH---FNITE 128
A+ +NG L PI VQ +QAEKNRA + P++LYIG L NITE
Sbjct: 374 IKALSVNGYMLKNRPIKVQSSQAEKNRAAKATKHHPIDPNDIPLKLYIGGLLGPLSNITE 433
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
L+ +F PFG I ++++ DP TG+SKG+GFI FH A +A +A +NG E+AGR +KV
Sbjct: 434 QELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAIEAMTVMNGMEVAGREIKV 493
Query: 189 GTVTD---------------------RNESVGGGPSNLDTDEMERAGVD----------L 217
D + + GG S +E + +D
Sbjct: 494 SYAQDSKYLLASDALKDLNIPNLNQIKAATQGGQKSTNKEEEQDNEKIDNDDDDGGGLIT 553
Query: 218 GATGRLQLMFKLAEGTGLE--LPPAAASALN-LAQNAILNSSTPQVSSSTAPPIATQCFL 274
GA+ ++ LM KL T ++ +P A+ N +A+N++ N S P ++ P I +
Sbjct: 554 GASSKIALMQKLQRDTIIDASIPNTYATGTNAMARNSLNNVSNPL--NNITPNI-----V 606
Query: 275 LANMFDPATE---TNPTWDVEIRDDVIEECNKHG 305
L NMF P ++P + +I +DV EEC+K+G
Sbjct: 607 LCNMFSPNDSSIGSDPDFFSDIIEDVREECSKYG 640
>gi|217074842|gb|ACJ85781.1| unknown [Medicago truncatula]
Length = 346
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 168/306 (54%), Gaps = 52/306 (16%)
Query: 54 TRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLP-------NL 106
+RR KG+ YIEF D SVP+A+ L+GQ LLG P++V+P++AEKN +T NL
Sbjct: 5 SRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTASVVNGPSGNL 64
Query: 107 QPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSA 166
P +GG RLY+G+LH +ITE LR +FE FG+++ +Q+ +D D G KG+GF+ F
Sbjct: 65 GPY-SGGARRLYVGNLHSSITEADLRRVFEAFGQVELVQMPLD-DIGHCKGFGFVQFARL 122
Query: 167 DDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLM 226
+DAK AQ + E+ GR +KV VTD++ G + D D+ E G+ L A+ R LM
Sbjct: 123 EDAKNAQSLNSQLEIGGRTIKVSAVTDQSGMQEFGGNTGDIDDDEGGGLSLNASSRALLM 182
Query: 227 FKLAEGTGLELPPAAASALNLAQNAILNS---------STPQVSSSTAPPIA-------- 269
KL + +G+ A+S + L N+++N+ S P V+ AP +
Sbjct: 183 QKL-DRSGI-----ASSMVGLLGNSVVNNTGLNLQAMGSIPAVALIPAPGVGMPGGGLQI 236
Query: 270 --------------TQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG------VGAS 309
++C LL NMFDP E P +D+++++DV EC+K G V
Sbjct: 237 PMLTSPTIDTIGTPSECLLLKNMFDPEDEKEPDFDLDVKEDVEAECSKFGNLKHIYVDKR 296
Query: 310 TVCFIY 315
+ F+Y
Sbjct: 297 SAGFVY 302
>gi|68073969|ref|XP_678899.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56499509|emb|CAH94054.1| splicing factor, putative [Plasmodium berghei]
Length = 535
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 169/334 (50%), Gaps = 48/334 (14%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSV-GKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+RD T+ + L + RD+ EFFS V GKVRD++ I ++ + KG+AY+EF ESV
Sbjct: 151 KRDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQESV 210
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLH---FNITE 128
A+ +NG L PI VQ +QAEKNRA + P++LYIG L NITE
Sbjct: 211 IKALSVNGYMLKNRPIKVQSSQAEKNRAAKATKHHPIDPNDIPLKLYIGGLLGPLSNITE 270
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
L+ +F PFG I ++++ DP TG+SKG+GFI FH A +A +A +NG E+AGR +KV
Sbjct: 271 QELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAIEAMTVMNGMEVAGREIKV 330
Query: 189 GTVTDRN-------------------ESVGGGPSNLDTDEMERAGVDL------------ 217
D ++ G E E+ +
Sbjct: 331 SYAQDSKYLLATDALKDLNIPNLNQIKAAAQGVQKSANKEEEQDNEKIDNDDDDGGGLIT 390
Query: 218 GATGRLQLMFKLAEGTGLE--LPPAAASALN-LAQNAILNSSTPQVSSSTAPPIATQCFL 274
GA+ ++ LM KL T ++ +P A N +A+N++ N S+P + T +
Sbjct: 391 GASSKIALMQKLQRDTIIDASIPNTYAIGTNAIARNSLNNVSSPLNN-------VTSNIV 443
Query: 275 LANMFDPATE---TNPTWDVEIRDDVIEECNKHG 305
L NMF P ++P + +I +DV EEC+K+G
Sbjct: 444 LCNMFSPNDSNIGSDPDFFSDIIEDVREECSKYG 477
>gi|301108451|ref|XP_002903307.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097679|gb|EEY55731.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 556
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 172/348 (49%), Gaps = 59/348 (16%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPL 73
RD RT+F QL+Q++R +DLE F + GKV +V LI T R KG AY+E + E VP
Sbjct: 141 RDHRTVFVGQLTQKVREKDLERFLTKTGKVENVLLIRDKFTNRSKGFAYVELSNLEDVPK 200
Query: 74 AMGLNGQ--KLLGIPIIVQPTQAEKNRAGNTLPNLQ-PRGTGGPM--------------- 115
+ LNGQ PI+++ ++AEKN A + +GGP+
Sbjct: 201 VLLLNGQVPDFQVFPIMIKVSEAEKNFAAKKDSVMNGTAASGGPLSADGSGAGLAGAISG 260
Query: 116 ------------RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITF 163
R+Y G+LH NITED LR +F+ FG++ ++ + D + GRSKG+ FI F
Sbjct: 261 GGMSASALSAASRIYCGNLHTNITEDDLRIVFQSFGEVLSVTINRD-EMGRSKGFSFIQF 319
Query: 164 HSADDAKKAQEQLNGFELAGRPMKVGTVTDR-----------NESVGGGPSNLDTDEMER 212
S +A A + NG ELAG +++G V + + + GG L+ +E E
Sbjct: 320 SSPQEANFALSKGNGLELAGSFLRLGPVNENAVGNRTGVSSVDNNATGGRWKLEDEEGE- 378
Query: 213 AGVDLGATGRLQLMFKLA----------EGTGLELPPAAASALNLAQNAILNS--STPQV 260
G+ + A R LM KLA G G AA ++A A + +T +
Sbjct: 379 -GLSMNAQSRSALMAKLAGNDVNLFPSMSGVGGYTASTAAYTNSMAATAAQRAEQATALM 437
Query: 261 SSSTAPPIATQCFLLANMFDPATET---NPTWDVEIRDDVIEECNKHG 305
SSS + CF++ NMFD E NP W VEI+ DV EEC ++G
Sbjct: 438 SSSEIEGSESFCFVVKNMFDVYQEQKSGNPEWGVEIQQDVEEECGQYG 485
>gi|388496342|gb|AFK36237.1| unknown [Medicago truncatula]
Length = 202
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 119/180 (66%), Gaps = 9/180 (5%)
Query: 6 SDDLSPE---ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY 62
+++ PE ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+ Y
Sbjct: 25 KENVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGY 84
Query: 63 IEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKN----RAGNTLPNLQPRGTGGPMRLY 118
IEF D SVP+A+ L+GQ LLG P++V+P++AEKN A + + P G +LY
Sbjct: 85 IEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASSGAAVVGPYGAVD-RKLY 143
Query: 119 IGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
+G+LHFN+TE LR IFEPFG+I+ +QL +D +TG KG+GF+ F + AK AQ LNG
Sbjct: 144 VGNLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEHAKAAQ-SLNG 202
>gi|303279518|ref|XP_003059052.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460212|gb|EEH57507.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 515
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 163/337 (48%), Gaps = 44/337 (13%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+L +RD RT+F LS + R++ +FFS+ G V DVR+I T R KG+AY+EFKD
Sbjct: 132 ELEKLDRDTRTVFAYNLSTKADEREIYKFFSAAGIVSDVRIIYDRNTPRSKGMAYVEFKD 191
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTL-------------------PNLQP 108
S+ A+ L GQ L ++V+ ++AEKN A PNL P
Sbjct: 192 KASIENALSLTGQTLRNQVVMVKSSEAEKNIAWEAEQATKREEQKLATTVDPAINPNLNP 251
Query: 109 RGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADD 168
T GP +L + +H N+ E+ L+ +FEPFG+ D I +D D G + +
Sbjct: 252 --TAGPCKLRVEGVHPNVREEDLKAVFEPFGETDFI--TIDKD---QSGGAHVQYKLTQQ 304
Query: 169 AKKAQEQLNGFELAGRPMKVGTV-----TDRNESVGGGPSNLDTDEMERAGVDLGATGRL 223
A A QLNG EL G+ +KV ++ +N + + GV + + GR
Sbjct: 305 AMLAVSQLNGLELVGKTLKVFVAPVVVNPATAAAIAYTQANAVSLSEDAEGVRMDSRGRA 364
Query: 224 QLMFKLAEGT--GLELPPAAASALNLAQNAILNSSTPQVSSSTAP----------PIATQ 271
LM +LA GT G + AS + +TPQ+ ++ P PI TQ
Sbjct: 365 ALMARLA-GTSDGGDFAGVDASGRVITAQEAAKLATPQMPAAALPTAQGVLGPGSPIPTQ 423
Query: 272 CFLLANMFDPATETNPTWDVEIRDDVIEECNKHGVGA 308
LL N+FDP ET P W +I +DV +EC KHG A
Sbjct: 424 TLLLKNLFDPKEETEPEWWNDIAEDVKDECGKHGAVA 460
>gi|293336330|ref|NP_001169267.1| uncharacterized protein LOC100383130 [Zea mays]
gi|223975957|gb|ACN32166.1| unknown [Zea mays]
gi|413934151|gb|AFW68702.1| hypothetical protein ZEAMMB73_109361 [Zea mays]
Length = 318
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 158/276 (57%), Gaps = 32/276 (11%)
Query: 70 SVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITED 129
SVP+A+ L+GQ LLG ++V+P++AEKN + + +GG +LY+G+LH NITED
Sbjct: 2 SVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATS-GGAASGGARKLYVGNLHSNITED 60
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKV 188
LR +FEPFG+++ +QL +D TG KGYGFI F +DAK AQ LNG ++AGR +KV
Sbjct: 61 QLRQVFEPFGQVELVQLPLDAMTGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGRVIKV 119
Query: 189 GTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL-AEGTGLELPPA-AASALN 246
VTD G + D D+ E G+ L A+ R LM KL GT L A+ +
Sbjct: 120 SAVTDHVGVQASGATTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSLTGGIGAAGVA 179
Query: 247 LAQNAILNSS------TPQVSSSTAPPIA---------------TQCFLLANMFDPATET 285
+ +++ ++ +P VS+ + P A T+ LL NMFDP+ ET
Sbjct: 180 VPATSVIGAAGAASLLSPTVSAVGSVPGAPVLPITAQNVIMSTPTEFLLLKNMFDPSLET 239
Query: 286 NPTWDVEIRDDVIEECNKHG------VGASTVCFIY 315
+P +D++IRDDV +EC+K G V +T F+Y
Sbjct: 240 DPDFDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVY 275
>gi|217074578|gb|ACJ85649.1| unknown [Medicago truncatula]
gi|388499396|gb|AFK37764.1| unknown [Medicago truncatula]
Length = 365
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 119/179 (66%), Gaps = 9/179 (5%)
Query: 7 DDLSPE---ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
+++ PE ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+ YI
Sbjct: 189 ENVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYI 248
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKN----RAGNTLPNLQPRGTGGPMRLYI 119
EF D SVP+A+ L+GQ LLG P++V+P++AEKN A + + P G +LY+
Sbjct: 249 EFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASSGAAVVGPYGA-VDRKLYV 307
Query: 120 GSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
G+LHFN+TE LR IFEPFG+I+ +QL +D +TG KG+GF+ F + AK AQ LNG
Sbjct: 308 GNLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEHAKAAQ-SLNG 365
>gi|413934152|gb|AFW68703.1| hypothetical protein ZEAMMB73_109361 [Zea mays]
Length = 300
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 103/258 (39%), Positives = 148/258 (57%), Gaps = 14/258 (5%)
Query: 70 SVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITED 129
SVP+A+ L+GQ LLG ++V+P++AEKN + + +GG +LY+G+LH NITED
Sbjct: 2 SVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATS-GGAASGGARKLYVGNLHSNITED 60
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMKV 188
LR +FEPFG+++ +QL +D TG KGYGFI F +DAK AQ LNG ++AGR +KV
Sbjct: 61 QLRQVFEPFGQVELVQLPLDAMTGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGRVIKV 119
Query: 189 GTVTDR-NESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL 247
VTD GG +++R+G TG + T + AAS L+
Sbjct: 120 SAVTDHVGVQASGGSRAALMLKLDRSGTATSLTGGIGAAGVAVPATSVIGAAGAASLLSP 179
Query: 248 AQNAILNSSTPQVSSSTAPPIA----TQCFLLANMFDPATETNPTWDVEIRDDVIEECNK 303
+A+ + V TA + T+ LL NMFDP+ ET+P +D++IRDDV +EC+K
Sbjct: 180 TVSAVGSVPGAPVLPITAQNVIMSTPTEFLLLKNMFDPSLETDPDFDLDIRDDVQDECSK 239
Query: 304 HG------VGASTVCFIY 315
G V +T F+Y
Sbjct: 240 FGAVKHIFVDKNTAGFVY 257
>gi|108706237|gb|ABF94032.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
Length = 566
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 177/372 (47%), Gaps = 102/372 (27%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
ERD RT+F QLS + RD+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP
Sbjct: 186 ERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 245
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
+A+ L+GQ LLG ++V+P++AEKN + + +GG +LY+G+LH NITED LR
Sbjct: 246 MAIALSGQLLLGQQVMVKPSEAEKNLVQSNA-SSSGAASGGARKLYVGNLHSNITEDQLR 304
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG-FELAGRPMK---- 187
F +DAK AQ LNG ++AGR +K
Sbjct: 305 -----------------------------QFARLEDAKAAQS-LNGQLDIAGRVIKASVF 334
Query: 188 ------------------------------VGTVTDRNESVGGGPSNLDTDEMERAGVDL 217
V VTD+ G + D D+ E G+ L
Sbjct: 335 FRFTRIHVVFKLYISNIRVLPDTMLNCCNQVSAVTDQAGVQVSGVTTGDLDDDEGGGLAL 394
Query: 218 GATGRLQLMFKL------------AEGTGLE----LPPAAASALNLAQNAILNS-----S 256
A+ R LM KL GTGL LPPA+ ++L + S
Sbjct: 395 NASSRALLMQKLDRSGVTTSLTAGIAGTGLNTSVGLPPASVLGAPPVAASVLPTVPGLGS 454
Query: 257 TPQVS-------SSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG---- 305
P VS TAPP ++C LL NMFDP+ ET+P +D++I+DDV EEC+K G
Sbjct: 455 VPGVSLPITTQAIETAPP--SECLLLKNMFDPSVETDPDFDLDIKDDVQEECSKFGQVKH 512
Query: 306 --VGASTVCFIY 315
V +T F+Y
Sbjct: 513 IFVDKNTSGFVY 524
>gi|124513200|ref|XP_001349956.1| splicing factor, putative [Plasmodium falciparum 3D7]
gi|23615373|emb|CAD52364.1| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 864
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 172/332 (51%), Gaps = 37/332 (11%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSV-GKVRDVRLITCNKTRRFKGIAYIEF 65
+++ +RD T+ + L + RD+ EFFS V GKVRD++ I ++ + KG+AY+EF
Sbjct: 477 EEMEEAKRDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEF 536
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLH-- 123
E+V A+ NG L PI +Q +QAEKNRA + P++LYIG L
Sbjct: 537 YTQEAVIKALAANGMMLKNRPIKIQSSQAEKNRAAKAAKHQPIDPNDIPLKLYIGGLLGP 596
Query: 124 -FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
NITE L+ +F PFG I ++++ DP TG+SKG+GFI FH A +A +A +NG E+A
Sbjct: 597 LSNITEQELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAIEALTVMNGMEVA 656
Query: 183 GRPMKVGTVTDRNESVGGGPS------------NLDTDEMERAGVDL------------G 218
GR +KVG D + + N++T+E E+ + G
Sbjct: 657 GREIKVGYAQDSKYLLACDNTQENILKQQQMAKNINTEEEEQDNEKIDNDDGDGGGLIAG 716
Query: 219 ATGRLQLMFKLAEGTGLELPPAAASALNLAQNAIL--NSSTPQVSSSTAPPIATQCFLLA 276
++ LM KL + ++ P S NAI+ NS P S++ T +L+
Sbjct: 717 TGSKIALMQKLQRDSIID--PNIPSRYATGANAIMARNSFVP--STNNINNNVTTNLVLS 772
Query: 277 NMFDPATE---TNPTWDVEIRDDVIEECNKHG 305
NMF E ++P + +I +DV EEC+K+G
Sbjct: 773 NMFSSNDENIGSDPDFFNDILEDVKEECSKYG 804
>gi|357464473|ref|XP_003602518.1| Splicing factor-like protein [Medicago truncatula]
gi|355491566|gb|AES72769.1| Splicing factor-like protein [Medicago truncatula]
Length = 766
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/330 (35%), Positives = 163/330 (49%), Gaps = 77/330 (23%)
Query: 57 FKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRA-GNTLPNLQPRGTGGPM 115
F YIEF D SVP+A+ L+GQ LLG P++V+P++AEKN NT G GP
Sbjct: 399 FDCCRYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTTG--AAGVVGPY 456
Query: 116 -----RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAK 170
+LY+G+LHFN+TE LR IFEPFG ++ +QL +D +TG KG+GFI F + AK
Sbjct: 457 GAVDRKLYVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHIEHAK 516
Query: 171 KAQEQLNG-FELAGRPMKVGTVTDR--NESVGGGPSNLDTDE------------------ 209
AQ LNG E+AGR +KV +V D ++ ++ D DE
Sbjct: 517 AAQ-SLNGKLEIAGRTIKVSSVADHIGSQDTTTKSADFDDDEGGLSETSIFAPTISLSQF 575
Query: 210 -----------------MERAGVDLGATGRLQLMFKL-----AEGTGLEL----PPAAAS 243
M++A L A R LM KL GL + P A
Sbjct: 576 FPSYEFLAHLLCLFVTFMQQA---LNAQSRALLMQKLDRSGITASIGLPMNGLAPAQPAI 632
Query: 244 ALNLAQNAILNSS----------TPQVSSSTAPPIAT--QCFLLANMFDPATETNPTWDV 291
+L + +++ T + + A P+ T C LL NMFDP TET P +D+
Sbjct: 633 SLPIGNTGLIHPGLIPAPGLALPTQIMPTQVAEPVGTPSNCLLLKNMFDPTTETEPDFDL 692
Query: 292 EIRDDVIEECNKHG------VGASTVCFIY 315
+I++DV EEC+K+G V ++ F+Y
Sbjct: 693 DIKEDVEEECSKYGRVKHIYVDKNSAGFVY 722
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 32/48 (66%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGI 60
ERD RT+F Q+ + RD+ EFFS GKVRDVRLI +RR KG+
Sbjct: 211 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGV 258
>gi|387193898|gb|AFJ68729.1| rna binding motif protein 39b, partial [Nannochloropsis gaditana
CCMP526]
Length = 456
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 165/316 (52%), Gaps = 29/316 (9%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPL 73
+D RT+F QL + R + FF + GKVR V ++ T + KG AY+E D E++P
Sbjct: 80 KDQRTVFISQLVMKADERAVRAFFENFGKVRSVVMLRDRSTGKHKGFAYVEMADLETIPN 139
Query: 74 AMGLNGQ--KLLGIPIIVQPTQAEKNR--------AGNTLPN-LQPRGTGGPMRLYIGSL 122
+ +N Q PI V+ ++AEKN G P+ + R G P ++++G+L
Sbjct: 140 VLLMNDQVPDFQKFPIAVKASEAEKNYLAKQEAIAKGTVRPDGGRKRNVGQPNKVFLGNL 199
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
H NITE+ L + +PFG++ + L + + G SKG+ F TF ++A+ QL G LA
Sbjct: 200 HPNITEEDLMDLLKPFGEVQGLALAKN-EEGVSKGFAFATFSKVEEAQTVMTQLGGVPLA 258
Query: 183 GRPMKVGTVTDRN-ESV-------GGGPSNLDTDEMERAGV-DLGATGRLQLMFKLAEGT 233
RP+KVG V DR E+V GP+ + ++ AGV + A R +LM KL
Sbjct: 259 DRPIKVGPVNDRGVEAVAMASSVPASGPATGNW-RLDDAGVLPMDAAARAELMSKLGAAA 317
Query: 234 GLELPPAAASALNLAQNAILNSSTPQVSSSTAPP----IATQCFLLANMFDPATETNPTW 289
G+++P +A AQ L Q PP I ++ LL NMFDPA E + W
Sbjct: 318 GIQVPVSAGPG---AQQLQLQQLQQQQLLQQQPPPIVGIPSRALLLKNMFDPAEEKDDGW 374
Query: 290 DVEIRDDVIEECNKHG 305
+++I+DDV +E K G
Sbjct: 375 ELDIQDDVEDEGRKFG 390
>gi|388583572|gb|EIM23873.1| splicing factor, CC1-like protein [Wallemia sebi CBS 633.66]
Length = 459
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 48/329 (14%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSS-VGK--VRDVRLITCNKTRRFKGIAYI 63
D++ E + R++F QLS R + DL FF +G+ + D R++ +RR KGI Y+
Sbjct: 88 DNVDSLESEQRSVFVSQLSTRTNSSDLRRFFQDRLGERSIVDARIVMDKNSRRSKGIGYV 147
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGP--------- 114
E K + A+ L G+ L GIP+IV ++A+KNR +LQ +
Sbjct: 148 EVKTASLIDKALELTGELLNGIPMIVTQSEADKNRQAKASSSLQTQSVQAEEVRRSTKSR 207
Query: 115 -----------------MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKG 157
++Y+GSL + + E +R +FEPFG+I++++L VD D RSKG
Sbjct: 208 DYDNRSSTINPANDPTLYKVYVGSLSYTLKEYDVRSVFEPFGEIEDVELSVD-DQNRSKG 266
Query: 158 YGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDL 217
Y ++ + +D++ A EQ+N FELAGR +KV V + G P + +E G++L
Sbjct: 267 YAYVKYKRMEDSRMACEQMNRFELAGRTLKVQLV-----NYYGDPVRMPEQSIENEGLNL 321
Query: 218 GATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLAN 277
+ R +LM L P A LA + + T+ LL
Sbjct: 322 NSVSRHELMKTLMRSHD----PNAQFEQELA--------AREKEKKVQERMKTKGVLLKY 369
Query: 278 MFDPATETNPTWDVEIRDDVIEEC-NKHG 305
MF + ET W+ E+ +DV EC NK+G
Sbjct: 370 MFKASEETEAGWEKELAEDVKTECENKYG 398
>gi|351705238|gb|EHB08157.1| RNA-binding protein 39 [Heterocephalus glaber]
Length = 131
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/119 (63%), Positives = 94/119 (78%), Gaps = 1/119 (0%)
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
MLRGIFEP G+I++ QLM+D +TGRSKGYGFITF + AKKA EQLNGFELAGRPMKVG
Sbjct: 1 MLRGIFEPSGRIESSQLMMDSETGRSKGYGFITFSDSKRAKKALEQLNGFELAGRPMKVG 60
Query: 190 TVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLA 248
V +R ++ S LD+DE+ER G+DL TG LQLM +L+EGTGL++PPAA AL ++
Sbjct: 61 HVIERTDAT-SASSFLDSDELERTGIDLETTGCLQLMSRLSEGTGLQIPPAAQQALQMS 118
>gi|403359392|gb|EJY79355.1| Splicing factor, putative [Oxytricha trifallax]
Length = 508
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 177/365 (48%), Gaps = 54/365 (14%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSS---VGKVRDVRLITCNKTRRFKGIAYIEFKDPE 69
+RD T+ +++ RD+ FFS VGK+RDVRLI ++ + KGIAY+EF PE
Sbjct: 138 QRDDCTVLVNRIALHANERDMYNFFSKEKGVGKIRDVRLIRDQRSGKSKGIAYVEFYTPE 197
Query: 70 SVPLAMGLNGQKLLGIPIIVQPTQAEKNRA----------------GNTLPNLQPRGTGG 113
SV LAM L+G + +G I++Q +QAEKNRA GN P Q +
Sbjct: 198 SVLLAMALSGTQFMGQTIMIQASQAEKNRAAAASKYKKEQDRFGNLGNPKPQPQKK-VDL 256
Query: 114 PMRLYIGSL---HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAK 170
++++G L + E +RG F PFG I+ I+L D TGR+KG+ IT+ A+
Sbjct: 257 ENQVFVGGLIDVLNQVNEQDIRGWFTPFGDIETIELPKDHITGRNKGHAIITYRKHKYAR 316
Query: 171 KAQEQLNGFELAGRPMKVGTVTDRNESV----GGGPSNLDTDEMERAGVDLGATGRLQLM 226
A +++NGF++ GR +KV +T+ N + G G +L+ D + A R LM
Sbjct: 317 TAVKEMNGFDINGRKLKVQIMTEANSKLMNQRGAGDYDLEDDSANQ--YIHSAQSRALLM 374
Query: 227 FKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPA---T 283
KL+ + + + A N +A + A + + C LL NMFDP
Sbjct: 375 QKLSRESNKQDSGQSIMAQNYNNHAAV--------QQYAQAMPSNCVLLNNMFDPTGVDL 426
Query: 284 ETNPTWDVEIRDDVIEECNKHGVGASTVCFIYSVIFLKLW-SYVQVNLWCRHARKQDNPG 342
+ +P + +++++ V + C++ G K+W N W + K D G
Sbjct: 427 KKDPAYFIDVKEQVEDVCSEFGK------------VEKVWVEQAAGNCWVKF-NKNDIQG 473
Query: 343 HQRRQ 347
QR Q
Sbjct: 474 AQRSQ 478
>gi|428672327|gb|EKX73241.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 511
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 162/328 (49%), Gaps = 43/328 (13%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSS-VGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG 76
T+ + LS RD+ E FS GKVRD++ + ++ + KGIAY+EF ESV A+
Sbjct: 172 TVLVINLSLSADERDIYELFSEHAGKVRDIQCVRDLRSGKSKGIAYVEFYTQESVIKALS 231
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRG---TGGPMRLYIGSLHFNIT---EDM 130
+ G L G I +Q +QAEKNRA LQ + P +Y+G L ++ E
Sbjct: 232 MTGLDLKGQRIKIQSSQAEKNRAAKAAKMLQQTAMDASDSPFTIYVGGLIGALSALNEVE 291
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
L+ +F PFG I ++++ DP+TG SKGY F+ F + +AK+A +NGF++ G+ +KVG
Sbjct: 292 LKQLFSPFGTIIDVEIFRDPETGESKGYAFLKFRRSSEAKEAMNTMNGFDIGGQQIKVGY 351
Query: 191 VTDRNESVGGGPSNLDTDEMER-----AGVDLGATGRLQLMFKLAEGTGLELPPAAASAL 245
S+L ++ER G+ GAT ++ LM KL T +
Sbjct: 352 ANLNTTDSKSRLSSLGDVDIERLDDDGGGLISGATNKIALMEKLQRTTAAPI-------- 403
Query: 246 NLAQNAILNSSTPQVSSSTAPPIATQCFLLANMF---DPATETNPTWDVEIRDDVIEECN 302
S+T ++ P T +L+NMF DP + P + VEI +DV EEC
Sbjct: 404 ---------SATFSSGKASGP---TSNIILSNMFTANDPGAD-EPNFFVEIEEDVKEECE 450
Query: 303 KHGVGASTVCFIY---SVIFLKLWSYVQ 327
K+G V +Y I K+W Q
Sbjct: 451 KYG----KVVAVYLNKKTIDGKVWVKFQ 474
>gi|307109776|gb|EFN58013.1| hypothetical protein CHLNCDRAFT_57088 [Chlorella variabilis]
Length = 546
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 158/369 (42%), Gaps = 91/369 (24%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
+RD RT+F L R +++ +FF G + D+++IT T R KG AYIEF+ E V
Sbjct: 135 DRDTRTVFAYNLPLRAEEKEIFQFFIKAGPLNDIKVITDKTTGRSKGFAYIEFQRKEDVI 194
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRA--------------------------------- 99
A+ L GQ L+G ++V+ ++AEKN A
Sbjct: 195 NALALTGQVLMGQAVMVKMSEAEKNLAWEAAEQAKRQQKELERELGPGAMAAPLLPPPMP 254
Query: 100 -------GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDT 152
G +P + P GP RL + +L +ITE LR IFEPFG +D + L D
Sbjct: 255 PGMPGMVGLAMP-MAPMVAAGPARLALSNLPTSITETDLRPIFEPFGALDFLTLQRD-TA 312
Query: 153 GRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG---------------------TV 191
R G GF+ + DA KA+E L+G ++ G + VG
Sbjct: 313 ARPTGNGFVQYRLLSDATKAKENLSGLDIVGHQLGVGWANVETPVEAVAIAPPPPPLPVA 372
Query: 192 TDRNESVGGGPSNLDTD-EMERAGVDLGATGRLQLMFKLAEGTGLE--------LP---- 238
E V LD E G+ L R LM KLA GL+ LP
Sbjct: 373 MAAAEQVA---DQLDEPAEGTGGGLKLTGQSRAALMSKLAANAGLDVSNVPQIPLPQVAP 429
Query: 239 --PAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDD 296
P SAL L Q + A PI TQC LL NMFDPA ET WD EI +D
Sbjct: 430 QQPLVPSALALEQGLL----------GPASPIPTQCLLLKNMFDPAEETADNWDAEIAED 479
Query: 297 VIEECNKHG 305
V EC K+G
Sbjct: 480 VGSECQKYG 488
>gi|158429066|pdb|2JRS|A Chain A, Solution Nmr Structure Of Caper Rrm2 Domain. Northeast
Structural Genomics Target Hr4730a
Length = 108
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/92 (77%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Query: 105 NLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFH 164
NLQ +G+ GPMRLY+GSLHFNITEDMLRGIFEPFG+I++IQLM+D +TGRSKGYGFITF
Sbjct: 18 NLQ-KGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFS 76
Query: 165 SADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
++ AKKA EQLNGFELAGRPMKVG VT+R +
Sbjct: 77 DSECAKKALEQLNGFELAGRPMKVGHVTERTD 108
>gi|164659450|ref|XP_001730849.1| hypothetical protein MGL_1848 [Malassezia globosa CBS 7966]
gi|159104747|gb|EDP43635.1| hypothetical protein MGL_1848 [Malassezia globosa CBS 7966]
Length = 549
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 164/370 (44%), Gaps = 96/370 (25%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSS---VGKVRDVRLITCNKTRRFKGIAYIEFKDPE 69
E + +++FC +L R+ DL +FF S G V D +L + ++T GI Y+E E
Sbjct: 151 EYEVKSVFCSELDSRVGQFDLGDFFESNLGPGTVVDAQLGSDDRTGTSLGIGYVELASAE 210
Query: 70 SVPLAMGLNGQKLLG---------------------------------IPIIVQPTQAE- 95
VP A+ L+G+++ G IP P+ +E
Sbjct: 211 LVPRALELSGKRMFGWPIAVQPADAARKNPIVTMYEPPRSTGPTSTAAIPSTSSPSLSET 270
Query: 96 ------KNRAGNTLPNLQPRGTGGPM------------------RLYIGSLHFNITEDML 131
+ + T P + P G RLY+G+LH++IT +
Sbjct: 271 AFVSSSSSVSAPTGPIMPPSAHSGATVSGGDAMGASAVTADPEARLYVGNLHYDITSQHV 330
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTV 191
R +FEPFG +D +++ + TG+SKG+ F+ F + +AK+A EQLNGFELAGR M+VG V
Sbjct: 331 RVVFEPFGHLDEVEVCYNHMTGKSKGFAFVQFRNVHEAKQAMEQLNGFELAGRAMRVGPV 390
Query: 192 TDRNE--SVGGGPSNLDTDEMERAGVDL-------------GATGRLQLMFKLAEGTGLE 236
R + S G D + + V + + R LM KLA
Sbjct: 391 NARGQGSSERSGSGRYDVPDSDHDAVPMPPPTGGSGESSGSASDKRFALMEKLAR----- 445
Query: 237 LPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDD 296
N AQ +S P+ +S+ LL +MFDPA ET P W V++R+D
Sbjct: 446 -----TDPENHAQR--RPASIPEATSA--------AILLRHMFDPAEETEPHWHVDLRED 490
Query: 297 VIEECNKHGV 306
V EC +HG
Sbjct: 491 VRAECERHGT 500
>gi|412993528|emb|CCO14039.1| predicted protein [Bathycoccus prasinos]
Length = 641
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 159/346 (45%), Gaps = 62/346 (17%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
+RD RT F LS + RD+ +FF G+V DVR+I KG+AY+EF+D S+P
Sbjct: 246 DRDTRTCFAYNLSTKSDERDIFKFFMKAGEVTDVRIIYDRNRPISKGMAYVEFQDKSSIP 305
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKN------RAGNTLPNLQPRGTG------GPMRLYIG 120
A+ L G+ L G ++V+ ++AEKN +A + RG G GP L++
Sbjct: 306 KALELTGETLRGQKVMVKHSEAEKNIAWEAEQAAKGVTGKGKRGNGDGTQQSGPCALFVA 365
Query: 121 SLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFE 180
LH + E+ ++ +FEPFG +D I++ D + G+S G+G + + A A QLNG E
Sbjct: 366 GLHEGLAEEDVKAVFEPFGALDAIEISRDGN-GQSNGHGIVQYREWSHAMLAVSQLNGLE 424
Query: 181 LAGRPMKVGTVTDRNES-------------------------------VGGGPSNLDTDE 209
L G+ +K+ + + VGG + T
Sbjct: 425 LVGQALKISVAAGQGGAKNDNKNRNNDRSGGGDVGGGGGGGEEDDDDRVGGQMDDTAT-- 482
Query: 210 MERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSST----- 264
+ A R +LM KLA G + A L NA+ + +
Sbjct: 483 ----YAKMDAAKRAELMQKLAGGDATTI--GAIPTATLTHNAVKIKTKEEEKRELIMMTQ 536
Query: 265 -----APPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
+ PI T+C LL N+FDPA ET+ W ++I +DV E +K+G
Sbjct: 537 GFFGPSSPIPTKCVLLKNLFDPAEETDEEWWLDIEEDVKGEVSKYG 582
>gi|221058957|ref|XP_002260124.1| splicing factor [Plasmodium knowlesi strain H]
gi|193810197|emb|CAQ41391.1| splicing factor, putative [Plasmodium knowlesi strain H]
Length = 970
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 164/328 (50%), Gaps = 39/328 (11%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSV-GKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+RD T+ + L + RD+ EFFS V GKVRD++ I ++ + KG+AY+EF E+V
Sbjct: 589 KRDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQEAV 648
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPN--LQPRGTGGPMRLYIGSL---HFNI 126
A+ NG L PI +Q +QAEKNRA + + P P++LYIG L NI
Sbjct: 649 VKALSANGYMLKNRPIKIQSSQAEKNRAAKAAKHQPIDPNDI--PIKLYIGGLVGPLGNI 706
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
+E L+ +F PFG+I +++ DP TG+ KG+GFI F A +A +A LNG E+AGR +
Sbjct: 707 SEQELKQLFNPFGEILEVEIHRDPYTGKCKGFGFIQFFRASEAIEAMGVLNGMEIAGREL 766
Query: 187 KVGTVTDRN------------------------ESVGGGPSNLDTDEMERAGVDL--GAT 220
KV D E P N D + G L GA
Sbjct: 767 KVSFAQDSKYILASEKEAKEKVLAKLMAKKAKAEEKVEEPDNEKIDNDDDDGGGLIAGAG 826
Query: 221 GRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFD 280
++ LM KL T L+ +S NAI+ +++ + S T +L NMF
Sbjct: 827 SKIALMQKLQRDTILD--SGISSQFTTGANAIMQTTSLGAAQSNTLNNITPNLVLCNMFS 884
Query: 281 PATE---TNPTWDVEIRDDVIEECNKHG 305
P E ++P + +I +DV EEC+K+G
Sbjct: 885 PNDENIGSDPDFFSDIIEDVKEECSKYG 912
>gi|308807104|ref|XP_003080863.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116059324|emb|CAL55031.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 387
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 159/332 (47%), Gaps = 48/332 (14%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
+RD RT+F LS ++ R + +FFS VGKV DVR+I + KG+AY+EF D + +
Sbjct: 5 DRDTRTVFVTNLSTKLDERGIFKFFSKVGKVTDVRIIYDRNSTTSKGMAYVEFSDRKFIH 64
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPR-------------GTGGPMRLYI 119
A+ G +L G I V+ ++AEKN A + + G GP +L +
Sbjct: 65 PALECTGMELHGNAISVKTSEAEKNIAWEAEQAQKKKLGAAYGAAVYGAGGGAGPCKLRV 124
Query: 120 GSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGF 179
G LH ++ED ++ +FEPFG++D I ++ + D + F+ F A A QLNG
Sbjct: 125 GGLHLALSEDDIKAVFEPFGQLDFISMLKEDDGKYAS--AFVQFRQTSQAMLALSQLNGL 182
Query: 180 ELAGRPMKV-----------GTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFK 228
EL G P++V T+ ES+G LD D G+ + + GR LM +
Sbjct: 183 ELVGIPIRVSIASQGATAAASTMVAPTESLG----ELDED---GGGLKMDSRGRAALMAR 235
Query: 229 LA-------------EGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAP--PIATQCF 273
LA TGL A ++ + ++ P P PI T C
Sbjct: 236 LAGQDKEIEKGFTIDPATGLPTTVDAIKPIDAPGEDLPLAAQPITQGVLGPGSPIPTPCL 295
Query: 274 LLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
LL N+F+ A ET+P W ++I +DV EC K G
Sbjct: 296 LLKNLFNAAEETDPEWWLDIAEDVKGECEKFG 327
>gi|281205731|gb|EFA79920.1| putative RNA splicing factor [Polysphondylium pallidum PN500]
Length = 606
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/346 (32%), Positives = 167/346 (48%), Gaps = 55/346 (15%)
Query: 8 DLSPEER---DARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIE 64
++SPEE+ D+RT+F +LS +I DL EFF+ GKV V L+ T+R KG+ Y+E
Sbjct: 206 EISPEEQEESDSRTVFVSKLSPKITENDLYEFFAQAGKVLKVSLVIDKITKRLKGVGYVE 265
Query: 65 FKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHF 124
F + E V A+ L GQK+L I+V +EK T + + RLY+G L+
Sbjct: 266 FSEREMVEKAVLLTGQKVLNQSILVHGIHSEKKATPVTKIPVHTNNS----RLYVGYLNL 321
Query: 125 NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
+ITED +R IF G ++ ++L V P + Y F+ F +++ A+KA + LNG E+ G+
Sbjct: 322 SITEDQIRTIFSQHGDLEFVKLHVKPGLYK---YAFVQFKASESAQKALDALNGVEVMGK 378
Query: 185 PMKV------GTVTDRNESVGGGPS----------------NLDTDEMERAGVDLGATGR 222
+KV GT D ++S P+ + + R
Sbjct: 379 NLKVVFVNENGTNKDLSQSNMNNPNNIHNNNNHHHQRNMHFQQNNQNNLNNQNNQNNIAR 438
Query: 223 L------QLMFKLAEGTG-LELPPAAASALN-------LAQNAILNSSTPQVSSST---- 264
+ Q M L E G + L P A S L+ +A N N + V ++T
Sbjct: 439 VMQQVYHQPMGSLDEEDGSIPLTPQAQSILSAKLMGIPIASNGAHNVAAANVLANTVYNQ 498
Query: 265 ---APP--IATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
APP I + C +L NMFDP TET WD EI DV EC+ +G
Sbjct: 499 IPPAPPVTITSTCIVLKNMFDPDTETGDDWDKEIERDVELECSTYG 544
>gi|442759379|gb|JAA71848.1| Putative rna-binding protein 39 [Ixodes ricinus]
Length = 158
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 105/159 (66%), Gaps = 20/159 (12%)
Query: 147 MVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLD 206
M+D +TGRSKGY FITF ++ AKKA EQLNGFELAGRPMKVG VT+R ++ S LD
Sbjct: 1 MMDSETGRSKGYRFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDA-SSASSFLD 59
Query: 207 TDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASAL----NLAQNAILNSS-----T 257
+DE+ER G+DLG TGRLQLM + AEGTGL++PPAA AL +LA A+ S
Sbjct: 60 SDELERTGIDLGTTGRLQLMARPAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIGLQ 119
Query: 258 PQVSSST----------APPIATQCFLLANMFDPATETN 286
++S T P+ATQCF L+NMF+P T +
Sbjct: 120 TRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTHST 158
>gi|70938791|ref|XP_740024.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56517446|emb|CAH81784.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 412
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 110/185 (59%), Gaps = 4/185 (2%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSV-GKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+RD T+ + L + RD+ EFFS V GKVRD++ I ++ + KG+AY+EF ESV
Sbjct: 143 KRDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQESV 202
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLH---FNITE 128
A+ NG L PI VQ +QAEKNRA + P++LYIG L NITE
Sbjct: 203 IKALAANGYMLKNRPIKVQSSQAEKNRAAKASKHHPIDPNDIPLKLYIGGLLGPLSNITE 262
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
L+ +F PFG I +++ DP TG+SKG+GFI FH A +A +A +NG E+AGR +KV
Sbjct: 263 QELKQLFNPFGDILEVEIHRDPYTGKSKGFGFIQFHKASEAIEAMTVMNGMEVAGREIKV 322
Query: 189 GTVTD 193
D
Sbjct: 323 SYAQD 327
>gi|390363097|ref|XP_003730296.1| PREDICTED: uncharacterized protein LOC753008, partial
[Strongylocentrotus purpuratus]
Length = 239
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/106 (66%), Positives = 85/106 (80%)
Query: 141 IDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGG 200
IDNIQLM+D D RSKGYGFITFH A+DAK+A +QLNGFELAGRPMKV VT+RNE
Sbjct: 1 IDNIQLMMDTDANRSKGYGFITFHDAEDAKRALDQLNGFELAGRPMKVNHVTERNEQGQQ 60
Query: 201 GPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALN 246
PS LD++E+++ G+ L TGRLQLM KLAEGTG ++P AAA AL+
Sbjct: 61 APSFLDSEELDKRGITLNTTGRLQLMAKLAEGTGFQIPAAAAEALH 106
>gi|156099298|ref|XP_001615651.1| splicing factor [Plasmodium vivax Sal-1]
gi|148804525|gb|EDL45924.1| splicing factor, putative [Plasmodium vivax]
Length = 1016
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/341 (34%), Positives = 168/341 (49%), Gaps = 53/341 (15%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSV-GKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
RD T+ + L + RD+ EFFS V GKVRD++ I ++ + KG+AY+EF +SV
Sbjct: 622 RDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQDSVV 681
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPN--LQPRGTGGPMRLYIGSL---HFNIT 127
A+ NG L PI +Q +QAEKNRA + + P P++LYIG L NIT
Sbjct: 682 KALSANGYMLKNRPIKIQSSQAEKNRAAKAAKHQPIDPNDI--PIKLYIGGLVGPLGNIT 739
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E L+ +F PFG+I +++ DP TG+ KG+GFI F A +A +A LNG E+AGR +K
Sbjct: 740 EVELKQLFNPFGEILEVEIHRDPYTGKCKGFGFIQFFRASEAIEAMGVLNGMEIAGRELK 799
Query: 188 VGTVTD------------------------RNESVGGGPSNLDTDEMERAGVDL--GATG 221
V D + E P N D + G L GA
Sbjct: 800 VSFAQDSKYILASEKEAKEKILAQLLAKKAKAEEKVEEPDNEKIDNDDDDGGGLIAGAGS 859
Query: 222 RLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTA----PPIA-------- 269
++ LM KL T L+ +S NAI++++ + S A P+A
Sbjct: 860 KIALMQKLQRDTVLD--SGISSQFATGANAIMHAAPLAAAQSNAIMHGAPLAAAQPSALN 917
Query: 270 --TQCFLLANMFDPATE---TNPTWDVEIRDDVIEECNKHG 305
T +L NMF P E ++P + +I +DV EEC+K+G
Sbjct: 918 NITPNLVLCNMFSPNDESIGSDPDFFTDIIEDVKEECSKYG 958
>gi|146197845|dbj|BAF57634.1| rnpc2 protein [Dugesia japonica]
Length = 278
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 123/232 (53%), Gaps = 29/232 (12%)
Query: 74 AMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRG 133
A+ LNGQKL+G+PI ++ +EK RA N GP +L + +LH I E M+
Sbjct: 5 ALDLNGQKLMGVPIQIRTVSSEKCRAAEGTMNSSYIYFRGPTKLCVSNLHPQINEQMIEE 64
Query: 134 IFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTD 193
IF P+GKID ++LM D G S G FI F ++AK EQ+N F LAG+ +K+ V +
Sbjct: 65 IFSPYGKIDELRLMKDI-RGTSLGTAFILFRKGENAKNVVEQMNDFNLAGQLLKIAPVVE 123
Query: 194 RNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAIL 253
GG + E GV + A RL LM KLA GTGL++ P A
Sbjct: 124 E-----GGLNEFG----ENQGVSMTAADRLGLMAKLAVGTGLQVVPKA------------ 162
Query: 254 NSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
+S AP I +QCF+L+NMFD + + E++DDV+ ECN+ G
Sbjct: 163 -------NSVQAPIINSQCFVLSNMFDVKDAHDDKFCKEVQDDVVGECNQFG 207
>gi|159163856|pdb|2CQ4|A Chain A, Solution Structure Of Rna Binding Domain In Rna Binding
Motif Protein 23
Length = 114
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 67/92 (72%), Positives = 82/92 (89%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+LSPEERDART+FCMQL+ RIR RDLE+FFS+VGKVRDVR+I+ +RR KGIAY+EF
Sbjct: 16 DNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFC 75
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNR 98
+ +SVPLA+GL GQ+LLG+PIIVQ +QAEKNR
Sbjct: 76 EIQSVPLAIGLTGQRLLGVPIIVQASQAEKNR 107
>gi|308473552|ref|XP_003099000.1| hypothetical protein CRE_26714 [Caenorhabditis remanei]
gi|308267803|gb|EFP11756.1| hypothetical protein CRE_26714 [Caenorhabditis remanei]
Length = 294
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 99/144 (68%), Gaps = 11/144 (7%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+LSPEERD RT+ MQ+++ R RDLEEFFSSVG VRDVR+IT ++T R KGI Y
Sbjct: 133 ELSPEERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRDVRIITDSRTGRSKGICY----- 187
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGN-----TLPNLQPRGTGGPMRLYIGSL 122
ESVPL + LNGQ+L+G P+ +Q T AE+NRA N TL + P GP + + +L
Sbjct: 188 -ESVPLGLALNGQRLMGAPLQIQRTCAERNRAANSSMASTLGFVAPGAAKGPAHVLVENL 246
Query: 123 HFNITEDMLRGIFEPFGKIDNIQL 146
H ITE+M+R IFE FG+I+ +++
Sbjct: 247 HPKITENMIREIFESFGRIEKLEM 270
>gi|392574247|gb|EIW67384.1| hypothetical protein TREMEDRAFT_33681 [Tremella mesenterica DSM
1558]
Length = 619
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 165/335 (49%), Gaps = 59/335 (17%)
Query: 15 DARTIFCMQLSQRIRTRDLEEFFSSV---GKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+AR++F Q+S R+ + DL FF G VRD R++T ++R KGI Y+E V
Sbjct: 244 EARSVFVSQISSRMTSSDLGLFFEDKLGRGAVRDARVVTDRGSKRSKGIGYVELDAVALV 303
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTL-------------PNLQPRGTGGPM--- 115
A+ L+G ++G+PI V T++E+NR G L P + + P+
Sbjct: 304 NRALALSGTIVMGMPIQVTLTESERNREGMDLAATIAKLSASKARPQVTYQTRFPPLSNG 363
Query: 116 --------------------RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS 155
RL++ L +++ D ++ +F+PFG+ID + L D TG+S
Sbjct: 364 LYIPPGVDVDANRDASVPYHRLFVSGLAYSLAADDIKQVFDPFGQIDFVDLHHDV-TGQS 422
Query: 156 KGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGV 215
KG ++ FH A+ A + +NGFE+AGRP++V T+ +R ++ +E AG
Sbjct: 423 KGTAYVQFHDLKSAQTALDAMNGFEIAGRPIRVQTIQERAHI---------SETLEDAGY 473
Query: 216 DLGA----TGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQ 271
G + R+ LM KLA G + + + I+++ST + AP T
Sbjct: 474 SQGRKMDNSTRMSLMQKLARNDGPGSAHNSPLQFSCHKMHIIDNST-----NNAPVAPTP 528
Query: 272 CFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHG 305
L+ NMF+P ET WD+++ +DV E +K+G
Sbjct: 529 FILVNNMFNPEEETERNWDLDLAEDVKGEIESKYG 563
>gi|219120589|ref|XP_002181030.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407746|gb|EEC47682.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 687
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 175/350 (50%), Gaps = 59/350 (16%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVG-KVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
+D RT+F QL QR + RDL++FF+ G KV +V L+ +T + KG AY+E K E V
Sbjct: 284 KDQRTVFVTQLVQRTQERDLKKFFTRKGCKVNEVILLRDKRTGKHKGCAYVEMKRMEDVS 343
Query: 73 LAMGLNGQ--KLLGIPIIVQPTQAEKNRAGN----------------TLPNLQPRGTG-G 113
+A+GL+ + P++V+ ++AEKN N + P L P G
Sbjct: 344 IAVGLSAEVPDFQRFPVLVKASEAEKNYLANASTATSTAAQMGVPIKSAPLLGPDGKMLE 403
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
++YIGSL +++++ L +F FG+++ + L +D +TG SKG+ F+TFH +A A
Sbjct: 404 AQKVYIGSLDPSVSQEHLFALFSQFGQLEKVTLQMDSNTGLSKGFAFLTFHDPKEANLAI 463
Query: 174 EQLNGFELAGRPMKVGTVTDRNESVGGG--------PSNLDTDEMERA---------GVD 216
+ + LAGRPMK G + + S+ G P++ T +RA GV
Sbjct: 464 QTMANQALAGRPMKTGWAS-QGSSIPGVEVVTSDEFPADAST-RAQRAYQVLAQLTMGVP 521
Query: 217 LGATGRLQLMFKLAE-----GTGLELPPAAASALNLAQNAILNSSTPQV---SSSTAP-- 266
+ + G+ A G +P A + +LA + +TP V + + AP
Sbjct: 522 VASVGQAPGTSSFAAAAAVPGGASRIPTVAEARASLAGAVAMAPATPAVLVPTPAVAPLG 581
Query: 267 -PIA---------TQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHGV 306
P A T+ L+ NMFD ET+P W+ +I+++ +EC+K+G
Sbjct: 582 SPDAKIVGNADTPTKNVLIRNMFDKDKETDPGWEKDIKEEFEDECSKYGT 631
>gi|345314908|ref|XP_003429563.1| PREDICTED: RNA-binding protein 39-like, partial [Ornithorhynchus
anatinus]
Length = 399
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 87/115 (75%), Gaps = 2/115 (1%)
Query: 46 VRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPN 105
+R+I+ +RR KG AY+EF D SVPLA+GL GQ++LG+PIIVQ +QAEKNRA N
Sbjct: 147 LRMISDRNSRRSKGFAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANN 206
Query: 106 LQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGF 160
LQ +G+ GPMRLY+GSLHFNITEDMLRGIFEPFG++ ++ D G + +GF
Sbjct: 207 LQ-KGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRVRRAGGILG-DLGGEESFGF 259
>gi|321259451|ref|XP_003194446.1| hypothetical protein CGB_E5340C [Cryptococcus gattii WM276]
gi|317460917|gb|ADV22659.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 615
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 165/340 (48%), Gaps = 69/340 (20%)
Query: 15 DARTIFCMQLSQRIRTRDLEEFFSSV---GKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+AR+IF QLS R+ ++ L FF G VRD R++T RR KGI Y+E + V
Sbjct: 240 EARSIFVSQLSARMTSQVLGLFFEDKLGRGAVRDARVVTDKVARRSKGIGYVELDSVDLV 299
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTL-------------------------PNL 106
A+ L+G ++GIPI + T+AE+N +G L N
Sbjct: 300 NKALALSGTVVMGIPINIMLTEAERNHSGTELITATALASNARSHGGGGGRSSVPFTQNY 359
Query: 107 QPRGTGGPM-----------------RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVD 149
P TG + RL++ +L F++T D +R +FEPFG+I+ + L +D
Sbjct: 360 PPLSTGLALPLGLDPDAHKDAAIPYHRLFVSNLAFSLTADDVRQVFEPFGEIEFVDLHMD 419
Query: 150 PDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDE 209
P +G KG ++ F A+ A + + GF+LAGR +KV T+ +R G + ++
Sbjct: 420 P-SGLRKGTAYVQFKDVKSAQMALDAMAGFDLAGRLIKVQTIQER----GTYQTPDLIED 474
Query: 210 MERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIA 269
G L A R QLMFKLA ++NL+ +A P++S S + A
Sbjct: 475 SGNYGTRLDANQRQQLMFKLAR---------TEPSVNLSLSA------PKISGSQSKVPA 519
Query: 270 ---TQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHG 305
T ++ NMF+P ET WD+++ +DV E +K+G
Sbjct: 520 MDPTPRIVVHNMFNPEEETERNWDLDLAEDVKGEVESKYG 559
>gi|403222792|dbj|BAM40923.1| RNA splicing factor [Theileria orientalis strain Shintoku]
Length = 649
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 51/312 (16%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSS-VGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+ +RD T+ +S + RD+ E FS GKVRD++L+ +++ R KGIAY+EF
Sbjct: 316 DIEEAQRDDLTVLVFNMSLSVDERDIYELFSEHAGKVRDIQLVRDSRSGRSKGIAYVEFY 375
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQP---RGTGGPMRLYIGSL- 122
ESV A+ +NG L G I VQ +QAEKNRA LQ + P + + +L
Sbjct: 376 TQESVIKALSMNGMSLKGQGIRVQSSQAEKNRAARAAKQLQENALKEADNPTTVMVSNLV 435
Query: 123 --HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFE 180
N++E L+ +F PFG + + + + D G SKGY ++ F +A++A +NGF+
Sbjct: 436 GVLSNLSEGDLQQLFAPFGNVAEVAVARN-DLGLSKGYAYVRFKRWTEAREALNVMNGFD 494
Query: 181 LAGRPMKVGTVTDRNESVGGGPSNLDTDEMER-----AGVDLGATGRLQLMFKLAEGTGL 235
++G+P+KV VT G + L ++ER AG+ G++ ++ LM KL +
Sbjct: 495 ISGQPIKVSYVTSNKRGRGSRLNELGDLDIERLDDEEAGLISGSSNKIALMKKLQQ---- 550
Query: 236 ELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMF--DPATETNPTWDVEI 293
+A N+ +L+NM+ + + N +D EI
Sbjct: 551 -----RVNAANI--------------------------VLSNMYTSEDYADNNDFFD-EI 578
Query: 294 RDDVIEECNKHG 305
DDV EEC K+G
Sbjct: 579 EDDVREECKKYG 590
>gi|66810518|ref|XP_638966.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
gi|60467589|gb|EAL65610.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
Length = 727
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 109/188 (57%), Gaps = 7/188 (3%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
EE D RT+F +LSQ I +DL + FS G V +VRLIT T+R KG+ Y+EF E V
Sbjct: 261 EESDQRTVFVSKLSQNIVEKDLSDLFSQAGTVLNVRLITDKVTKRMKGVGYVEFSQKEMV 320
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDML 131
A+ L+G L G I+V Q EK + + +GG R+Y+G +H ++ E+ +
Sbjct: 321 DKAIALSGSVLDGQQILVHSIQPEK----KVIKSNSTGSSGGESRIYVGYIHLSVAEEQI 376
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTV 191
R IF+P+G ID I + P G SK Y FI F + + AK+A +LNG+EL G+ +K+ V
Sbjct: 377 RVIFQPYGDIDFINIHTKP--GISK-YAFIQFKTQESAKRAITELNGYELMGKNLKLNMV 433
Query: 192 TDRNESVG 199
+ S G
Sbjct: 434 SQEKNSNG 441
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 23/121 (19%)
Query: 203 SNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNL------------AQN 250
S+LD D+ G+ L A GR L KL +G L PP+ N+ + +
Sbjct: 554 SSLDEDD---GGIPLTAHGRALLTAKL-QGKTL-TPPSNNLNNNINNNNNNINNLNNSTH 608
Query: 251 AILN---SSTPQVSSSTAPP---IATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKH 304
++N +ST ++ T P + C +L NMFDP TET WD +I + EC+
Sbjct: 609 TVINPSLASTGIITPYTQLPHFAFVSTCLILRNMFDPETETEENWDQDILSETHAECSTF 668
Query: 305 G 305
G
Sbjct: 669 G 669
>gi|159164266|pdb|2DNZ|A Chain A, Solution Structure Of The Second Rna Binding Domain Of Rna
Binding Motif Protein 23
Length = 95
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 79/95 (83%), Gaps = 1/95 (1%)
Query: 110 GTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDA 169
G+ G LY+GSLHFNITEDMLRGIFEPFGKIDNI LM D DTGRSKGYGFITF ++ A
Sbjct: 1 GSSGSSGLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECA 60
Query: 170 KKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSN 204
++A EQLNGFELAGRPM+VG VT+R + G GPS+
Sbjct: 61 RRALEQLNGFELAGRPMRVGHVTERLDG-GSGPSS 94
>gi|389585114|dbj|GAB67845.1| splicing factor [Plasmodium cynomolgi strain B]
Length = 877
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 158/313 (50%), Gaps = 45/313 (14%)
Query: 31 RDLEEFFSSV-GKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIV 89
RD+ EFFS V GKVRD++ I ++ + KG+AY+EF E+V A+ NG L PI +
Sbjct: 514 RDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQEAVVKALSANGYMLKNRPIKI 573
Query: 90 QPTQAEKNRAGNTLPN--LQPRGTGGPMRLYIGSL---HFNITEDMLRGIFEPFGKIDNI 144
Q +QAEKNRA + + P P++LYIG L NI+E L+ +F PFG+I +
Sbjct: 574 QSSQAEKNRAAKAAKHQPIDPNDI--PIKLYIGGLVGPLGNISEQELKQLFNPFGEILEV 631
Query: 145 QLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTD----------- 193
++ DP TG+ KG+GFI F A +A +A LNG E+AGR +KV D
Sbjct: 632 EIHRDPYTGKCKGFGFIQFFRASEAIEAMGVLNGMEIAGRELKVSFAQDSKYILASEKEA 691
Query: 194 -------------RNESVGGGPSNLDTDEMERAGVDL--GATGRLQLMFKLAEGTGLELP 238
+ E P N D + G L GA ++ LM KL L+
Sbjct: 692 KDKLIAQLLAKKAKAEEKVEEPDNEKIDNDDDDGGGLIAGAGSKIALMQKLQRDPILDSG 751
Query: 239 PA---AASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATE---TNPTWDVE 292
+ A A + Q A L ++ P ++ P + +L NMF P E ++P + +
Sbjct: 752 ISSQFATGANTIMQTAPLATAQPNTLNNITPNL-----VLCNMFSPNDESIGSDPDFFTD 806
Query: 293 IRDDVIEECNKHG 305
I +DV EEC+K+G
Sbjct: 807 IIEDVKEECSKYG 819
>gi|209878175|ref|XP_002140529.1| splicing factor, CC1-like family domain-containing protein
[Cryptosporidium muris RN66]
gi|209556135|gb|EEA06180.1| splicing factor, CC1-like family domain-containing protein
[Cryptosporidium muris RN66]
Length = 555
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 152/306 (49%), Gaps = 54/306 (17%)
Query: 32 DLEEFFSS-VGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQ 90
D+ EFF++ G VRD+R+I ++ R KG+ Y+EF ESV A+ L+GQ ++ P+ +Q
Sbjct: 216 DVYEFFAAHAGNVRDIRIIRDQRSGRSKGVCYVEFYTAESVIKALKLSGQSIMNSPVTIQ 275
Query: 91 PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSL--HFN-ITEDMLRGIFEPFGKIDNIQLM 147
+QAEKNRA + P++LY+G L H + +TED + +F FG I ++++
Sbjct: 276 ASQAEKNRAAKLAKLQELEAEIVPLKLYVGGLVDHLSKLTEDEINKLFRTFGPIKSVEIP 335
Query: 148 VDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTD--RNESVGGGPS-N 204
DP T + +G+ ++TF D +A LN +E+AG+ + V D N S+G S N
Sbjct: 336 RDPHTDKHQGFAYVTFQKTIDGHEAMRALNNYEIAGQRITVALSVDTPTNNSIGSTSSIN 395
Query: 205 L-------------DTDEME--RAGVDLGATGRLQLMFKLAE----GTGLELPPAAASAL 245
+ DT+++E G+ GA+ R LM KL E T +L P
Sbjct: 396 VMSYAPSISIDLYGDTEKLEDVDGGLLSGASSRSILMKKLQEREFGRTETQLIP------ 449
Query: 246 NLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDV------EIRDDVIE 299
Q+ IL +S ++C +L NMF + D+ EI DV
Sbjct: 450 ---QDEILKTS-------------SRCLVLGNMFTREEILDSKGDIDIITLEEIEKDVES 493
Query: 300 ECNKHG 305
EC K+G
Sbjct: 494 ECKKYG 499
>gi|50553814|ref|XP_504318.1| YALI0E23628p [Yarrowia lipolytica]
gi|49650187|emb|CAG79917.1| YALI0E23628p [Yarrowia lipolytica CLIB122]
Length = 621
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 122/201 (60%), Gaps = 21/201 (10%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+LS E+RD RT++ Q++ +++ +L +FF+ G V DV L+ +++ R +G+A++EF+D
Sbjct: 321 ELSAEDRDKRTVYVQQVAPHVQSTELFDFFAEAGPVHDVSLVK-DRSSRCRGVAFVEFED 379
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNR-------------AGNTLPNLQPRGTGGP 114
ESV A+GL G+ L G ++++ T + +NR AG+T +
Sbjct: 380 VESVSRAIGLTGRSLHGQALLIRCTDSARNREEQQSEASFNSSGAGSTHAVANVNASTSA 439
Query: 115 M------RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADD 168
+ RLY+G+++F +TE + IFE FG I+ L + TG+SKGY FI + + DD
Sbjct: 440 IDSVRFHRLYVGNIYFGVTEGEIIQIFEAFGPIEFADLQKEK-TGKSKGYCFIQYVNPDD 498
Query: 169 AKKAQEQLNGFELAGRPMKVG 189
AK A E++NGFELAGR ++VG
Sbjct: 499 AKTALEKMNGFELAGRKLRVG 519
>gi|58267808|ref|XP_571060.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112313|ref|XP_775132.1| hypothetical protein CNBE4060 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257784|gb|EAL20485.1| hypothetical protein CNBE4060 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227294|gb|AAW43753.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 615
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 160/340 (47%), Gaps = 69/340 (20%)
Query: 15 DARTIFCMQLSQRIRTRDLEEFFSSV---GKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+AR+IF QLS R+ ++ L FF G VRD R++T RR KGI Y+E + V
Sbjct: 240 EARSIFVSQLSARMTSQVLGLFFEDKLGRGAVRDARVVTDKVARRSKGIGYVELDSVDLV 299
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTL-------------------------PNL 106
A+ L+G ++GIPI + T+AE+N +G L N
Sbjct: 300 NKALALSGTVVMGIPINIMLTEAERNHSGTELITATALASNARSHGGGGGRSSVPFTQNY 359
Query: 107 QPRGTGGPM-----------------RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVD 149
P TG + RL++ +L F++T D +R +FEPFG+I+ + L D
Sbjct: 360 PPLSTGLALPPGLDPDAHKDAAIPYHRLFVSNLAFSLTADDVRQVFEPFGEIEFVDLHTD 419
Query: 150 PDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDE 209
+G KG ++ F A+ A + + GF+LAGR +KV T+ +R G + ++
Sbjct: 420 L-SGLRKGTAYVQFKDVKSAQMALDAMAGFDLAGRLIKVQTIQER----GTYQTPDLIED 474
Query: 210 MERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQV--SSSTAPP 267
G L A R QLMFKLA N L+ S P++ S S P
Sbjct: 475 SGNYGTRLDANQRQQLMFKLA---------------RTEPNVNLSLSAPKINGSQSKIPA 519
Query: 268 I-ATQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHG 305
+ T ++ NMF+P ET WD+++ +DV E +K+G
Sbjct: 520 MDPTPRIVVHNMFNPEEETERNWDLDLAEDVKGEVESKYG 559
>gi|221487552|gb|EEE25784.1| splicing factor protein, putative [Toxoplasma gondii GT1]
Length = 633
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 111/191 (58%), Gaps = 11/191 (5%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSS-VGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
RD T+ + L + + + EFFS+ GK+RD++LI ++ KG+AY+EF ESV
Sbjct: 215 RDDLTVLVLNLCLKAEEKHIYEFFSANAGKIRDIQLIRDQRSGTSKGVAYVEFYTQESVI 274
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGG-------PMRLYIGSLHFN 125
AM LNG G P+ VQ + AEKNRA Q G PMR+Y+G L N
Sbjct: 275 KAMALNGIAFKGQPLRVQASMAEKNRAARAAKQQQQGGAAAESAVVSIPMRVYVGGLVDN 334
Query: 126 ---ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
I E+ LR +F PFG+I+ +++ D +TG +GYGF+T+ SA DA +A + +N FEL
Sbjct: 335 LAKIQEEDLRVLFGPFGRINEVEIPKDANTGGLRGYGFVTYASAADAHEAMQHMNNFELL 394
Query: 183 GRPMKVGTVTD 193
G+ ++VG D
Sbjct: 395 GQQLRVGYAAD 405
>gi|237830355|ref|XP_002364475.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|211962139|gb|EEA97334.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|221507345|gb|EEE32949.1| splicing factor protein, putative [Toxoplasma gondii VEG]
Length = 633
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 111/191 (58%), Gaps = 11/191 (5%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSS-VGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
RD T+ + L + + + EFFS+ GK+RD++LI ++ KG+AY+EF ESV
Sbjct: 215 RDDLTVLVLNLCLKAEEKHIYEFFSANAGKIRDIQLIRDQRSGTSKGVAYVEFYTQESVI 274
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGG-------PMRLYIGSLHFN 125
AM LNG G P+ VQ + AEKNRA Q G PMR+Y+G L N
Sbjct: 275 KAMALNGIAFKGQPLRVQASMAEKNRAARAAKQQQQGGAAAESAVVSIPMRVYVGGLVDN 334
Query: 126 ---ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
I E+ LR +F PFG+I+ +++ D +TG +GYGF+T+ SA DA +A + +N FEL
Sbjct: 335 LAKIQEEDLRVLFGPFGRINEVEIPKDANTGGLRGYGFVTYASAADAHEAMQHMNNFELL 394
Query: 183 GRPMKVGTVTD 193
G+ ++VG D
Sbjct: 395 GQQLRVGYAAD 405
>gi|401411525|ref|XP_003885210.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
gi|325119629|emb|CBZ55182.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
Length = 642
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 110/191 (57%), Gaps = 11/191 (5%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSS-VGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
RD T+ + L + + + EFFS+ GK+RD++LI ++ KG+AY+EF ESV
Sbjct: 220 RDDLTVLVLNLCLKAEEKHIYEFFSANAGKIRDIQLIRDQRSGTSKGVAYVEFYTQESVI 279
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGG-------PMRLYIGSL--- 122
AM LNG G P+ VQ + AEKNRA Q G PMR+Y+G L
Sbjct: 280 KAMALNGIAFKGQPLRVQASMAEKNRAARAAKQQQQGGGAAESAVVSIPMRVYVGGLVDS 339
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
I E+ LR +F PFG+I+ +++ D +TG +GYGF+T+ SA DA +A + +N FEL
Sbjct: 340 LAKIQEEDLRVLFGPFGRINEVEIPKDANTGGLRGYGFVTYASAADAHEAMQHMNNFELL 399
Query: 183 GRPMKVGTVTD 193
G+ ++VG D
Sbjct: 400 GQQLRVGYAAD 410
>gi|326438129|gb|EGD83699.1| hypothetical protein PTSG_04304 [Salpingoeca sp. ATCC 50818]
Length = 541
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 150/325 (46%), Gaps = 40/325 (12%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFS-SVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+RDART+ C+QL + DL +F GK+ R++ T R KGIAY EF+D SV
Sbjct: 147 DRDARTVTCLQLHRTCTAEDLGQFLEEKAGKLVSCRIVRDRNTGRSKGIAYAEFEDESSV 206
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNR-AGNTLPNLQPRGTGGPMRLYIGSLHFNIT-ED 129
+A+ L GQ+L G P++V PT AE+NR A Q T R+ + +L I E+
Sbjct: 207 TVALSLTGQRLKGAPLVVMPTMAERNRQAAEKAKQEQLART----RVIVENLPEKIEDEE 262
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
L +F FG++ L D GR GYG++ F A DAK+A +NG + + +KV
Sbjct: 263 ALEKLFARFGRVKKGVLTKD-QFGRPLGYGYVVFGFAKDAKEAVTGMNGQAIDDKVLKVT 321
Query: 190 TVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTG-----------LELP 238
D + + S ++ D + + L R ++ G + P
Sbjct: 322 LAVDASPQLA---SQVNLDTQPKPNLPLPQPNRPNFRPNMSMPLGQAPAVPAVVPPISRP 378
Query: 239 PAAASALNLAQNAILNSSTP-QVSSSTAPPIA-----------------TQCFLLANMFD 280
P A + + P QV + T P++ T L+NMFD
Sbjct: 379 PLPMMAPLMPAPPMRPPGVPGQVPAITPMPMSQPTQPQPSLPGGVSQMPTNFLKLSNMFD 438
Query: 281 PATETNPTWDVEIRDDVIEECNKHG 305
PA ET+P W ++RD+V+E K+G
Sbjct: 439 PAAETDPDWHEDVRDEVLEASTKYG 463
>gi|145494510|ref|XP_001433249.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400366|emb|CAK65852.1| unnamed protein product [Paramecium tetraurelia]
Length = 535
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 161/339 (47%), Gaps = 52/339 (15%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSS--VGKVRDVRLITCNKTRRFKGIAYIEF 65
+L R T+ L + + + + +FF + GK+RD+R+I K+ R +G+AY+EF
Sbjct: 151 ELEEAHRQDLTVLMYCLPLKAKEKHIYQFFQTFNCGKIRDIRIIRDQKSGRSRGVAYVEF 210
Query: 66 KDPESVPLAMGLN-------GQKLLGIPIIVQPTQAEKNRAGNTLPNLQPR--------- 109
ES+P+A+ LN GQ++ IP+ +Q +QAEKNRA N+Q +
Sbjct: 211 YQEESIPMALALNDRLFIMDGQQVGTIPVKIQLSQAEKNRAARDQKNMQIKQNKLQSIQD 270
Query: 110 --GTGGPMRLYIGSLHFN---ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFH 164
GP R+ I + I E+ +R F PFG ID +++ D + GR G ++T+
Sbjct: 271 LQNMNGPARVQITGMAEQLQKINEEDIREAFVPFGTIDTVEIPKD-EQGRMTGVLYVTYE 329
Query: 165 SADDAKKAQEQLNG--FELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGR 222
A+ A+ E +N F L G+P+KV V+ N + LD D ++ R
Sbjct: 330 KAESARNMIEVINNQQFLLNGKPIKVQLVSGANNYMD---LQLDDDLVQ------NPVMR 380
Query: 223 LQLMFKLAEGT---GLELPPAAASALNLAQNAILN---SSTPQVSSST----------AP 266
+ LM KL + + LPP S L L ILN S P + + A
Sbjct: 381 ITLMKKLMDDNLIDNINLPP-LMSQLGLTVQRILNIIQSPNPSLGCISGWMPLKHNPPAC 439
Query: 267 PIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
P T+ +L NM+ +N VE++++V EC K+G
Sbjct: 440 PCITKVIVLTNMWTDLEISNQAAIVELKEEVENECKKYG 478
>gi|71026268|ref|XP_762815.1| splicing factor [Theileria parva strain Muguga]
gi|68349767|gb|EAN30532.1| splicing factor, putative [Theileria parva]
Length = 644
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 146/314 (46%), Gaps = 52/314 (16%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSS-VGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+ +RD T+ + + RD+ E FS GKVRD++ + ++ R KGIAY+EF
Sbjct: 309 DIEEAQRDDLTVLVSNMHLSVDERDIYELFSEHAGKVRDIQCVRDLRSGRSKGIAYVEFY 368
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQP---RGTGGPMRLYIGSL- 122
ESV A+ + G + G I V +QAEKNRA LQ + + P + + +L
Sbjct: 369 TQESVIKALSMTGMSMKGQGIRVHSSQAEKNRAAKAQKQLQDNALKESDNPTTIVVSNLL 428
Query: 123 ----HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
+ N E L +F PFG I ++ L D G SKGY +I F ++AK+A +NG
Sbjct: 429 GVLSYLNEIE--LNQLFSPFGNIIDVAL-ARTDDGNSKGYAYIRFKRWNEAKEALNVMNG 485
Query: 179 FELAGRPMKVGTVTDRNESVGGGPSNLDTDEMER-----AGVDLGATGRLQLMFKLAEGT 233
F++ G+ +KV R +S S D D MER AG+ G+ ++ LM KL +
Sbjct: 486 FDINGQQIKVAYANTRKDSKSRLHSLGDVD-MERLDDDDAGLISGSNIKIALMKKLQQ-- 542
Query: 234 GLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPAT-ETNPTWDVE 292
P+ + +L+NM+ A E N + E
Sbjct: 543 -------------------------------RQPLNSSNLVLSNMYTSADYEDNREFFDE 571
Query: 293 IRDDVIEECNKHGV 306
I +DV EEC K+G
Sbjct: 572 IEEDVKEECGKYGT 585
>gi|66363398|ref|XP_628665.1| splicing factor with 3 RRM domains [Cryptosporidium parvum Iowa II]
gi|46229660|gb|EAK90478.1| splicing factor with 3 RRM domains [Cryptosporidium parvum Iowa II]
Length = 563
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 177/415 (42%), Gaps = 93/415 (22%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSS-VGKVRDVRLITCNKTRRFKGIAYIEFK 66
DL RD T+ M L+ R ++ EFF++ G VRD+R+I ++T R KG+ Y+EF
Sbjct: 125 DLEYSSRDDLTVLVMNLNLDAREFEVYEFFTTYAGNVRDIRIIRDHRTGRSKGVCYVEFY 184
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIG---SLH 123
ESV A+ L+GQK++ PI VQ +QAEKNRA + + P+ L + L
Sbjct: 185 SVESVLKALKLSGQKIMNTPITVQASQAEKNRAAKLAKLEEIKAETTPLLLRVDGLVGLL 244
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
I D + +F FGK++ I + +D T R G+ I F A + A + LN FE+AG
Sbjct: 245 ARIRRDEIESLFSTFGKVNKIDIEIDKKTQRCLGFAHILFEKAIEGHDAIKALNNFEIAG 304
Query: 184 RPMKVGTVTDRNESV------------------------------GGGPSNLDT------ 207
+ + V + N S+ NL+
Sbjct: 305 QKITVTISQECNSSIKVSNCLASSTFNSYLSPSAVSNSQNEPSKGNSSAHNLERVSELDK 364
Query: 208 -DEMERAGVDLGATGRLQLMFKLAEGTGLEL---PPAAASALNLAQNAILNSS------- 256
DE E A V LGA R L KL ++ PP ++ + + + ILN+S
Sbjct: 365 LDESEEA-VLLGADSRNFLTKKLLARAQSQIDNPPPIQETSNDTSSSTILNTSLPSPSSS 423
Query: 257 -----------------TPQVSSSTA-------PPIATQCFLLANMF-----DPATETNP 287
T S S++ I +C LL+NMF + E +
Sbjct: 424 IPSLNQLSNTNQNLPVLTEAYSQSSSNNIEFNNSEIHLRCLLLSNMFTEQSIKESMEEDE 483
Query: 288 TWDV---EIRDDVIEECNKHGVGASTVCFIYSVIFLKLWSYVQVNLWCRHARKQD 339
T + EI+ DV EEC K+G CF+ + N+W +++R ++
Sbjct: 484 TIEQILEEIQADVEEECGKYGTLLE--CFLDK-------EKMDGNVWVKYSRPEE 529
>gi|145513991|ref|XP_001442906.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410267|emb|CAK75509.1| unnamed protein product [Paramecium tetraurelia]
Length = 545
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 165/339 (48%), Gaps = 52/339 (15%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSS--VGKVRDVRLITCNKTRRFKGIAYIEF 65
+L R T+ L + + + + +FF + GK+RD+R+I K+ R +G+AY+EF
Sbjct: 161 ELEEAHRQDLTVLMYCLPLKAKEKHIYQFFQTFNCGKIRDIRIIRDQKSGRSRGVAYVEF 220
Query: 66 KDPESVPLAMGLN-------GQKLLGIPIIVQPTQAEKNRAG----------NTLPNLQP 108
ES+P+A+ LN GQ++ IP+ +Q +QAEKNRA N L N+Q
Sbjct: 221 YQEESIPMALALNDRLFIMDGQQVGTIPVKIQLSQAEKNRAARDQKNMQIKQNKLQNIQD 280
Query: 109 -RGTGGPMRLYIGSLHFN---ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFH 164
+ GP R+ I + I E+ +R F PFG I+ +++ D ++GR G ++T+
Sbjct: 281 LQNMNGPARVQITGMAEQLQRINEEDIREAFVPFGTIETVEIPKD-ESGRMTGVLYVTYE 339
Query: 165 SADDAKKAQEQLNG--FELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGR 222
A+ A+ E +N F L G+P+KV V+ N + LD D ++ R
Sbjct: 340 KAESARNMIEVINNQPFLLNGKPIKVQLVSGANNYMD---LQLDDDLVQ------NPVMR 390
Query: 223 LQLMFKLAEGT---GLELPPAAASALNLAQNAILN---SSTPQVSSST----------AP 266
+ LM KL + + + LPP + L L ILN S P + + A
Sbjct: 391 ITLMKKLMDDSLIDNINLPP-LMTQLGLTVQRILNIIQSPNPTLGCISGWMPLKHNPPAC 449
Query: 267 PIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
P T+ +L NM+ +N VE++++V EC K+G
Sbjct: 450 PCTTKVIVLTNMWTDLEISNQAAIVELKEEVENECKKYG 488
>gi|145509627|ref|XP_001440752.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407980|emb|CAK73355.1| unnamed protein product [Paramecium tetraurelia]
Length = 533
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 161/339 (47%), Gaps = 52/339 (15%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSS--VGKVRDVRLITCNKTRRFKGIAYIEF 65
+L R T+ L + + + + +FF + GK+RD+R+I K+ R +G+AY+EF
Sbjct: 149 ELEEAHRQDLTVLMYCLPLKAKEKHIYQFFQTFNCGKIRDIRIIRDQKSGRSRGVAYVEF 208
Query: 66 KDPESVPLAMGLN-------GQKLLGIPIIVQPTQAEKNRAGNTLPNLQPR--------- 109
ES+P+A+ LN GQ++ IP+ +Q +QAEKNRA N+Q +
Sbjct: 209 YQEESIPMALALNDRLFIMDGQQVGTIPVKIQLSQAEKNRAARDQKNMQIKQNKLQSIQD 268
Query: 110 --GTGGPMRLYIGSLHF---NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFH 164
GP R+ I + I E+ +R F PFG ID +++ D + GR G ++T+
Sbjct: 269 LQNMNGPARVQITGMAEQLQKINEEDIREAFVPFGTIDTVEIPKD-EQGRMTGVLYVTYE 327
Query: 165 SADDAKKAQEQLNG--FELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGR 222
A+ A+ E +N F L G+P+KV V+ N + LD D ++ R
Sbjct: 328 KAESARNMIEVINNQQFLLNGKPIKVQLVSGANNYMD---LQLDDDLVQ------NPVMR 378
Query: 223 LQLMFKLAEGT---GLELPPAAASALNLAQNAILN---SSTPQVSSST----------AP 266
+ LM KL + + LPP + L L ILN S P + + A
Sbjct: 379 ITLMKKLMDDNLIDNINLPP-LMTQLGLTVQRILNIIQSPNPSLGCISGWMPLKHNPPAC 437
Query: 267 PIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
P T+ +L NM+ +N VE++++V EC K+G
Sbjct: 438 PCITKVIVLTNMWTELEISNQAAIVELKEEVENECKKYG 476
>gi|294882869|ref|XP_002769861.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
gi|239873674|gb|EER02579.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
Length = 364
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 106/181 (58%), Gaps = 4/181 (2%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFS-SVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
RD T+ M + + +++ F S + GKVRDV++I +T R KG+AY+EF P+S+
Sbjct: 151 HRDDCTVMVMGIHPKCTEKEVYVFMSQNAGKVRDVQVIRDPRTNRSKGVAYVEFYTPDSI 210
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLH---FNITE 128
A+ NGQ L+G PI +Q +QAEKNRA +Q + PMR+Y+G L ++ E
Sbjct: 211 LKALACNGQALMGHPIRIQASQAEKNRAAEAARVVQNQQQDLPMRVYVGGLTGVLIHLQE 270
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+R +F PFG I I++ P TGR +G+ F+ + A DA+ A ++ + +A ++V
Sbjct: 271 SEIRKLFAPFGDIQCIEIAKSPYTGRPRGFAFVIYSRACDARVAIAAMHKYRIADTTLEV 330
Query: 189 G 189
G
Sbjct: 331 G 331
>gi|330791359|ref|XP_003283761.1| hypothetical protein DICPUDRAFT_74732 [Dictyostelium purpureum]
gi|325086384|gb|EGC39775.1| hypothetical protein DICPUDRAFT_74732 [Dictyostelium purpureum]
Length = 630
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 106/189 (56%), Gaps = 11/189 (5%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
EE D RT+F ++SQ + +DL + FS GKV V+LI T++ KG+ Y+EF + V
Sbjct: 203 EESDQRTVFVSKISQNVVDKDLYDLFSKAGKVLGVQLIVDKVTKKNKGVGYVEFAEKVMV 262
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-RLYIGSLHFNITEDM 130
A+ L+G L G I V Q EK +P G R+Y+G +H ++TE+
Sbjct: 263 ERAVALSGSYLDGQAITVHAIQPEKK-------TTKPTGISAEQSRIYVGYIHLSVTEEQ 315
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
+R IF+P+G I+ I + P G SK + FI F + + AK+A +LNG+EL G+ +K+
Sbjct: 316 IRVIFQPYGDIEFINIHTKP--GISK-FAFIQFRTQESAKRAISELNGYELMGKNLKLNM 372
Query: 191 VTDRNESVG 199
V+ + G
Sbjct: 373 VSQEKNANG 381
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 15/114 (13%)
Query: 203 SNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPP---AAASALNLAQNAILNSSTPQ 259
S+LD D+ G+ L A GR L KL +G L P A A A+ Q P
Sbjct: 463 SSLDEDD---GGIPLTAHGRALLTAKL-QGKVLPTPQQQMAKAPAIQQQQQQQQQQQQPN 518
Query: 260 VSSSTAPP--------IATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
+ +S P ++ C +L NMFDP TET WD +I + EC++ G
Sbjct: 519 MQTSVIQPYTSLPQFGFSSTCLILRNMFDPDTETEEDWDQDITTETHSECSQFG 572
>gi|401888136|gb|EJT52101.1| hypothetical protein A1Q1_06639 [Trichosporon asahii var. asahii
CBS 2479]
gi|406699204|gb|EKD02415.1| hypothetical protein A1Q2_03307 [Trichosporon asahii var. asahii
CBS 8904]
Length = 612
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 160/348 (45%), Gaps = 65/348 (18%)
Query: 2 RPAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFS-SVG--KVRDVRLITCNKTRRFK 58
R +D L+ + +AR++F QL+ +++ DL FF +G VRD R+I +RR +
Sbjct: 229 RDEAADLLNEVDSEARSVFVSQLAASLKSSDLGLFFEDKLGPRTVRDARIINDRHSRRSR 288
Query: 59 GIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTL--------------- 103
GI Y+E + V A+ L+G ++GIPI+V T A N G L
Sbjct: 289 GIGYVELASTDLVSKALALSGTIVMGIPILVTLTDASSNPDGMNLGAILATLKAERRERR 348
Query: 104 ------------PNLQPR---------GTGGPM-RLYIGSLHFNITEDMLRGIFEPFGKI 141
P LQ R P RL+I L + + +R +FEPFG+I
Sbjct: 349 ERIQQRRFPPLSPGLQHRLGVDVNAHAEAALPYHRLFIADLAEVLNAEDIRQVFEPFGEI 408
Query: 142 DNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGG 201
+ + L D TG SKG +I F + A+ A + +N FELA + +KV +V
Sbjct: 409 EFVDLHTDV-TGTSKGTAYIQFAELNSAQMALDAMNNFELADKTIKVMSV-----DPPRA 462
Query: 202 PSNLDTD---EMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTP 258
P D + R G L A GR+ LM+KLA E P ++ + + P
Sbjct: 463 PRIEDEERGGGNGRRGGRLDAQGRMDLMYKLAR---RENPDDSSRS---------RAPAP 510
Query: 259 QVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDV-IEECNKHG 305
Q P T L++NMF+P ET WD+++ DDV +E NK+G
Sbjct: 511 QQQERARP---TTFLLVSNMFNPDEETERNWDIDLADDVKVEVENKYG 555
>gi|118357832|ref|XP_001012164.1| splicing factor, CC1-like family protein [Tetrahymena thermophila]
gi|89293931|gb|EAR91919.1| splicing factor, CC1-like family protein [Tetrahymena thermophila
SB210]
Length = 588
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 169/354 (47%), Gaps = 70/354 (19%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSS---VGKVRDVRLITCNKTRRFKGIAYIEFKDPES 70
R+ T+ QL + +D+ + + KVRD++LI KT++ KG+AY EF E
Sbjct: 182 REDLTVMIYQLPSKAEEKDIWRYLTKHCGASKVRDIKLIRDQKTKKSKGVAYAEFYIKED 241
Query: 71 VPLAMG-------LNGQKLLGIPIIVQPTQAEKNRA-----------GNTLPNLQPRGTG 112
V A+ L G+++ + +Q +QAEKNRA L +
Sbjct: 242 VDKALAADTKPFFLKGEEVPMSEVRIQHSQAEKNRAALAAREIKRQRAEALKEQLAKLQE 301
Query: 113 GPMRLYIGSLH---FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDA 169
GP+++++G L+ ++ E L+ IF+ +G I++++L V+ G+ G+G++TF DA
Sbjct: 302 GPVKVFVGGLNGKLADMNEQDLKDIFQKYGDIESVELPVNA-QGKCLGFGYLTFKKKSDA 360
Query: 170 KKAQEQLNGFELAGRPMKVGTVTDR----------NESVGGGPS--NLDTDEMERAGVDL 217
+A + +NGF+L + + V V S+GG + N+D D+ E
Sbjct: 361 HEAIKMMNGFKLQDQKISVTPVAVNLSFAPVQPLFPSSLGGTQTQDNIDLDQNENKVFLH 420
Query: 218 GATGRLQLMFKLAEGTGLELPPAAASA------------------LNLAQNAILNSSTPQ 259
A +L+LM KLA + L +P +A LN+AQN PQ
Sbjct: 421 SAAKKLELMKKLAGNSTLSVPGTETAAQPTVNTPLPIPGIANLPSLNIAQN-------PQ 473
Query: 260 VSSS----TAPPIA---TQCFLLANMFDPAT-ETNPTWDVEIRDDVIEECNKHG 305
+ ++ PP + T +L NMF + + +P++ ++++DV EEC K+G
Sbjct: 474 IQNNFMAGNRPPTSLLPTNYIVLVNMFAESDFKNDPSFFADLKEDVSEECKKYG 527
>gi|85001331|ref|XP_955384.1| RNA splicing factor [Theileria annulata strain Ankara]
gi|65303530|emb|CAI75908.1| RNA splicing factor, putative [Theileria annulata]
Length = 643
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 144/314 (45%), Gaps = 52/314 (16%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSS-VGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+ +RD T+ + + RD+ E FS GKVRD++ + ++ R KGIAY+EF
Sbjct: 308 DIEEAQRDDLTVLVSNMHLSVDERDIYELFSEHAGKVRDIQCVRDLRSGRSKGIAYVEFY 367
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQP---RGTGGPMRLYIGSL- 122
ESV A+ + G + G I V +QAEKNRA LQ + + P + + +L
Sbjct: 368 TQESVIKALSMTGMSMKGQGIRVHSSQAEKNRAAKAAKQLQDNALKESDNPTTIVVSNLL 427
Query: 123 ----HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
+ N E L +F PFG I ++ L D G SKGY +I F ++AK+A +NG
Sbjct: 428 GVLSYLNEIE--LNQLFSPFGNIIDVAL-ARTDNGESKGYAYIRFKRWNEAKEALNVMNG 484
Query: 179 FELAGRPMKVGTVTDRNESVGGGPSNLDTDEMER-----AGVDLGATGRLQLMFKLAEGT 233
F++ G+ +KV R + S D D MER AG+ G+ ++ LM KL +
Sbjct: 485 FDINGQQIKVAYANTRKDPKSRLHSLGDLD-MERLDDDDAGLISGSNVKIALMKKLQQ-- 541
Query: 234 GLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATET-NPTWDVE 292
P+ + +L+NM+ A N + E
Sbjct: 542 -------------------------------RQPLNSSNLVLSNMYTSADYADNHEFFDE 570
Query: 293 IRDDVIEECNKHGV 306
I +DV EEC K+G
Sbjct: 571 IEEDVKEECGKYGT 584
>gi|313243412|emb|CBY42180.1| unnamed protein product [Oikopleura dioica]
Length = 250
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 87/132 (65%), Gaps = 6/132 (4%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+LS ERDART+ MQL+ IR DL++FFSSVG VR V+LI ++ + +G+AYIEFK
Sbjct: 121 ELSARERDARTVIAMQLAHAIREFDLKDFFSSVGDVRAVKLIK-DERHKTQGLAYIEFKH 179
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTL----PNLQPRGTGGPMRLYIGSLH 123
+SVPLAMGL GQ++LG I+V QA+KNR L NL GT GP ++ + LH
Sbjct: 180 VQSVPLAMGLTGQRVLGRAIVVHHAQADKNRHSEKLEQAKKNLMKAGT-GPYKIRVDKLH 238
Query: 124 FNITEDMLRGIF 135
+TE+ L+ I
Sbjct: 239 KTVTEEQLKMIM 250
>gi|156087761|ref|XP_001611287.1| splicing factor, CC1-like family protein [Babesia bovis]
gi|154798541|gb|EDO07719.1| splicing factor, CC1-like family protein [Babesia bovis]
Length = 488
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 166/335 (49%), Gaps = 40/335 (11%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSS-VGKVRDVRLITCNKTRRFKGIAYIEFK 66
++ +R+ T+ + L R + E FS GKVRDV+ + ++ R KG+AY+EF
Sbjct: 134 EIEEAQREDLTVLVINLYLGADERKIYEVFSEHAGKVRDVQCVRDARSGRSKGVAYVEFY 193
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGT---GGPMRLYI---- 119
ESV A+ +NG +L G I VQ +QAEKNRA +Q + P + +
Sbjct: 194 TQESVIKALAMNGFELNGQRIRVQSSQAEKNRAARAAKMIQQQTVEVADSPFTIQVTGLT 253
Query: 120 GSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGF 179
GSL +I+E +R +F PFG I +++++ DP + G +I F +AK+A +NGF
Sbjct: 254 GSLS-SISEVEIRQMFSPFGNIISVEILRDPHSNLPLGQAYIKFKRTSEAKEAVTAMNGF 312
Query: 180 ELAGRPMKVGTVTDRNESVGGGPSNLDTDEMER-----AGVDLGATGRLQLMFKLAEGTG 234
++ G+ +KV T S G S ++ER G+ GAT ++ LM KL +
Sbjct: 313 DIGGQTIKVAYAT--GASAKGRLSTHGEVDIERLDEDGGGLISGATNKIALMHKLQRTSS 370
Query: 235 LELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMF---DPATETNPTWDV 291
N+ L+S + ++S T L+NMF DP+ + PT+
Sbjct: 371 -------------DTNSHLSSGSSGDTNSGISSKPTCNITLSNMFSSSDPSV-SEPTFFD 416
Query: 292 EIRDDVIEECNKHGVGASTVCFIY---SVIFLKLW 323
E+ +DV EECNK+G V +Y VI K+W
Sbjct: 417 EVEEDVNEECNKYG----KVLKVYINRGVIDGKVW 447
>gi|328866609|gb|EGG14992.1| putative RNA splicing factor [Dictyostelium fasciculatum]
Length = 637
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 105/208 (50%), Gaps = 25/208 (12%)
Query: 15 DARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLA 74
D RT F LS ++ DL +FF+ GKV V L+ TR+ KG+ Y+EFK+ + V A
Sbjct: 179 DLRTAFIQNLSPKVHESDLYDFFAQAGKVVKVSLVVDRITRKLKGVGYVEFKEKDMVDEA 238
Query: 75 MGLNGQKLLGIPIIVQPTQAEK----------------------NRAGNTLPNLQPRGTG 112
+ L GQK+LG I V Q EK N TL N
Sbjct: 239 VKLTGQKVLGHTIAVHRVQPEKKSTATTIIGATTAMDATSLMATNADPTTLKNNTTSTVA 298
Query: 113 GPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKA 172
RLY+G L+ +TE+ +R +F P+G++D I + + P + Y F+ F +++ A +A
Sbjct: 299 HNSRLYVGFLNLGMTEEQIRALFVPYGEVDFINVHIKPGIYK---YAFVQFRTSEAAARA 355
Query: 173 QEQLNGFELAGRPMKVGTVTDRNESVGG 200
LNG +L G+P+K+ V++ + GG
Sbjct: 356 HADLNGKDLLGKPLKITFVSEDKINSGG 383
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 27/50 (54%)
Query: 256 STPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
S+P V A + C +L NMFDP +ET W EI+ DV EEC G
Sbjct: 526 SSPAVVEVVAVVAPSPCMVLKNMFDPDSETGDEWPQEIQKDVEEECTNFG 575
>gi|67604702|ref|XP_666635.1| splicing factor [Cryptosporidium hominis TU502]
gi|54657670|gb|EAL36408.1| splicing factor [Cryptosporidium hominis]
Length = 563
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 169/394 (42%), Gaps = 93/394 (23%)
Query: 29 RTRDLEEFFSS-VGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPI 87
R ++ EFF++ G VRD+R+I ++T R KG+ Y+EF ESV A+ L+GQK++ PI
Sbjct: 146 REFEVYEFFTTYAGNVRDIRIIRDHRTGRSKGVCYVEFYSVESVLKALKLSGQKIMNTPI 205
Query: 88 IVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIG---SLHFNITEDMLRGIFEPFGKIDNI 144
VQ +QAEKNRA + + P+ L + L I D + +F FGK++ I
Sbjct: 206 TVQASQAEKNRAAKLAKLEEIKAETTPLLLRVDGLVGLLARIRRDEIESLFSTFGKVNKI 265
Query: 145 QLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVG----- 199
+ +D T R G+ I F A + A + LN FE+AG+ + V + N SV
Sbjct: 266 DIEIDKKTQRCLGFAHILFEKAIEGHDAIKALNNFEIAGQKITVTISQECNSSVKVSNCL 325
Query: 200 --------GGPS-----------------NLDT-------DEMERAGVDLGATGRLQLMF 227
PS NL+ DE E A V LGA R L
Sbjct: 326 ASSTFNSYSSPSVVSNSQNEPSKGNSSAHNLERVSEFDKLDESEEA-VLLGADSRNFLTK 384
Query: 228 KLAEGTGLEL---PPAAASALNLAQNAILNSS--------------------------TP 258
KL ++ PP ++ N + + ILN+S T
Sbjct: 385 KLLARAQSQIDNPPPIQETSNNTSSSTILNTSLPSPSSSISPLNQLSNTNQNLPVLTGTD 444
Query: 259 QVSSS-----TAPPIATQCFLLANMF-----DPATETNPTWDV---EIRDDVIEECNKHG 305
SSS I +C LL+NMF + E + T + EI+ DV EEC K+G
Sbjct: 445 SQSSSNNIEFNKSEIHLRCLLLSNMFTEQSIKESMEEDETIEQILEEIQADVEEECGKYG 504
Query: 306 VGASTVCFIYSVIFLKLWSYVQVNLWCRHARKQD 339
CF+ + N+W +++R ++
Sbjct: 505 TLLE--CFLDK-------EKMDGNVWVKYSRPEE 529
>gi|300123623|emb|CBK24895.2| unnamed protein product [Blastocystis hominis]
Length = 465
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 147/323 (45%), Gaps = 35/323 (10%)
Query: 7 DDLSPEE---RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
DD EE RD RT+F L ++ + L +F G V+ ++LI + R KG+ YI
Sbjct: 96 DDEGNEESLTRDIRTVFVSDLQVKVDEKWLRHYFEQAGTVKSIKLIRDRYSNRSKGMGYI 155
Query: 64 EFKDPESVPLAMGLNGQKLL---------GIPIIVQPTQAEKNRAG---NTLPNLQPRGT 111
E E A+ LNGQK+ G P+ V+ ++AEKN + P +QP
Sbjct: 156 EMATQEDAAKALMLNGQKMCTKHKACNCSGFPMKVKRSEAEKNWSAMKERAPPKIQPST- 214
Query: 112 GGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKK 171
+ + +LH +T L +FE FG +DN+ + +D + + KG I F + A +
Sbjct: 215 -----IRVCNLHPQLTRPNLIELFEAFGDVDNVTMDLD-EHKQFKGSANIKFRRPESASR 268
Query: 172 AQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAE 231
A +++G R + V + + G D ++ + L + R +M +AE
Sbjct: 269 AATRMDGQVYFDRKLSVQLL----QRSGRNWKYEDRED----NIILDPSRRSLMMRHIAE 320
Query: 232 GTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDPATETNPTWDV 291
P +N N ++ + T A+ C +L NMF+ A E P WD+
Sbjct: 321 NKN---DPTLLDTMNQVNNRGQIANPAGAAKPTIEGNASNCLVLHNMFNSAIEQGPHWDI 377
Query: 292 EIRDDVIEECNKHGVGASTVCFI 314
+I++DV EC K+ GA CF+
Sbjct: 378 DIQEDVRTECQKY--GAILHCFV 398
>gi|167518462|ref|XP_001743571.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777533|gb|EDQ91149.1| predicted protein [Monosiga brevicollis MX1]
Length = 652
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 109/197 (55%), Gaps = 7/197 (3%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFS-SVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
LS EERD RT+ C QLS++ DL +F + GKVR V ++ T R KG+AY EF +
Sbjct: 242 LSEEERDERTVICSQLSRKTTEADLFDFLEQNAGKVRSVSMVRDRNTGRGKGVAYAEFLE 301
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
PESVP A+ LNGQ+L PI++ TQA+KNR L+ RL+I +L +T
Sbjct: 302 PESVPTALTLNGQRLNHAPIVIMLTQAQKNRQAAEKARLEREAM---TRLHITNLSEQVT 358
Query: 128 ED-MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
+D LR + + FG++ +L+ D + G+ KG F+ + ++A A + LN G +
Sbjct: 359 DDETLRELVKVFGRVRECKLVRD-EEGQPKGEAFVRYDEPNEANLALDGLNEMTFLGNTL 417
Query: 187 KVGTVTDRNESVGGGPS 203
+ T+ + G P+
Sbjct: 418 R-ATLAAQTGMASGAPA 433
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 22/109 (20%)
Query: 199 GGGPSN--LDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSS 256
G P+N DTD+ ER G+ L T R+ LM +LA S N+A
Sbjct: 494 GANPNNAQTDTDDTERGGLRLNGTSRVALMHRLA------------SRANMA-------- 533
Query: 257 TPQVSSSTAPPIATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
P + + P + +L +MFDPA ET WD ++ ++V+EEC K G
Sbjct: 534 VPGMPGAKPPKPESPFLVLHHMFDPAKETEANWDKDMAEEVLEECTKSG 582
>gi|223999617|ref|XP_002289481.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974689|gb|EED93018.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 821
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 166/380 (43%), Gaps = 88/380 (23%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSV------GKVRDVRLITCNKTRRFKGIAYIEFKD 67
+D RTIF QL + RD+ +F G VRDV L+ +T R KG AY+E +
Sbjct: 412 KDQRTIFISQLVMKAEERDIRRYFQRKILNGHRGCVRDVILLRDKRTGRHKGCAYVELAN 471
Query: 68 PESVPLAMGLNGQ--KLLGIPIIVQPTQAEKNRAGNTLPNLQPRGT----------GG-- 113
V A+ +G+ PI+V+ +TLP+ P GT GG
Sbjct: 472 LSDVEKALDASGKTPDFQKFPILVK---------SSTLPST-PGGTVEGAVILAVAGGMT 521
Query: 114 -------PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSA 166
++Y+G++ +T+ L +F FG ++ + L +DP TG S+G+ F+++
Sbjct: 522 VDGKRVESQKVYLGNVDRMVTQAQLYALFSQFGPLEKVLLQMDPTTGASRGFAFLSYRDP 581
Query: 167 DDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEM--------ERAG---V 215
DA A + ++G LAG+P+K G +S G + TDE+ E+A +
Sbjct: 582 KDANLAIQTMSGQLLAGKPLKTGWAN--QQSAAAGIVEVKTDEIPADANEKVEKANAALI 639
Query: 216 DLGATGRLQLMFKLAEGTGLELPPAAASAL---------NLAQNAI---LNSSTPQV--- 260
L TG + + + A L AA+AL ++A+ A+ L + P V
Sbjct: 640 QLTGTGLITVAQQGATAQALLSSGGAAAALGILPAQQVQSVAEAALEMALGGAAPNVQPV 699
Query: 261 -SSSTAPPIAT----------------------QCFLLANMFDPATETNPTWDVEIRDDV 297
+ + AP ++T Q L+ NMFD ET P W+ +I+ D
Sbjct: 700 PAVAVAPSVSTALIAPAPVVVDATVVGRSDNPSQHILVHNMFDKDEETEPNWENDIKLDF 759
Query: 298 IEECNKHGVGASTVCFIYSV 317
EEC ++G S V V
Sbjct: 760 EEECAQYGKMTSVVVMSKEV 779
>gi|149537605|ref|XP_001519688.1| PREDICTED: probable RNA-binding protein 23-like, partial
[Ornithorhynchus anatinus]
Length = 216
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/69 (79%), Positives = 60/69 (86%), Gaps = 1/69 (1%)
Query: 94 AEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTG 153
AEKNR NLQ +G+GGPMRLY+GSLHFNITEDMLRGIFEPFGKIDNI LM DPDTG
Sbjct: 149 AEKNRLAAMANNLQ-KGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTG 207
Query: 154 RSKGYGFIT 162
RSKG+GF+T
Sbjct: 208 RSKGFGFLT 216
>gi|340508480|gb|EGR34174.1| splicing factor, putative [Ichthyophthirius multifiliis]
Length = 582
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 176/392 (44%), Gaps = 75/392 (19%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFF---SSVGKVRDVRLITCNKTRRFKGIAYIEFKDPES 70
R+ T+ QL + +D+ ++ KVRD+++I +T++ KG+AY EF E
Sbjct: 179 REDLTVMIYQLPTKADEKDIWKYLVKHCGCTKVRDIKIIRDQRTKKSKGVAYAEFYIQED 238
Query: 71 VPLAMG-------LNGQKLLGIPIIVQPTQAEKNRAGNTLPNL-QPRGTG---------- 112
V A+ L G+++ VQ +QAEKNRA + Q R
Sbjct: 239 VQKALQADTKPFILKGEEVPNSETRVQHSQAEKNRAALAAKQIKQQRAEALKEQLQKLQD 298
Query: 113 GPMRLYIGSLH---FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDA 169
GP+++++G L ++T+ LR IF+ +G I++++L D + G+ G+G+I F +A
Sbjct: 299 GPVKVFVGGLTGKLASMTDTDLRDIFQQYGDIESVELPQDVN-GKCIGFGYIIFSKKSEA 357
Query: 170 KKAQEQLNGFELAGRPMKVGTVTDRNESVGGG--------PSNLDTDEMERAGVDLGATG 221
+A +N +++ + + V V+ N ++ + +D D+ E A
Sbjct: 358 HEAINAMNNKKISDQQITVAPVSSLNPALAAHMPIIALSQENKVDLDQNENNIYLHTAQS 417
Query: 222 RLQLMFKLAEGTGLELP-------------PAAAS----ALNLAQNAILNSSTPQVSSST 264
RLQLM KLA G L +P P S +LN+A N +LN+
Sbjct: 418 RLQLMQKLA-GNNLSIPGLDQSLSNGVLPIPGMNSNIIPSLNIANNPLLNNQITAGIHLK 476
Query: 265 APPIA---TQCFLLANMF-DPATETNPTWDVEIRDDVIEECNKHG------VGASTVCFI 314
P ++ T +L NMF + + + ++++DV EEC K G V + C
Sbjct: 477 RPLLSLVPTPYVVLVNMFLEGEGNGDSAFFADLKEDVAEECKKFGDVIQVIVAVKSPCGA 536
Query: 315 YSVIF--------------LKLWSYVQVNLWC 332
VIF ++L++ Q+N +C
Sbjct: 537 VFVIFNNEISAVNCAKNMDMRLFNQRQINCYC 568
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 93/171 (54%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGL 77
T+F LS + L F+ G V R+IT +T R KG Y+ F+ +++ AM L
Sbjct: 184 TVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTFESADALTAAMAL 243
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
G +L G I V + + R GN + + L++G+L FN+TED +R F
Sbjct: 244 TGTELDGREIRVDVSTPKPPRDGNRQGRKEAPQSAPTTTLFLGNLSFNVTEDEIRESFSQ 303
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+G++ +++ D DTG KG+G++ + + A+KA E LNG E+AGR +++
Sbjct: 304 YGQLVSVRFPTDRDTGAFKGFGYVEYGDVETAQKAVEGLNGVEIAGRSLRL 354
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 10 SPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPE 69
+P+ T+F LS + ++ E FS G++ VR T T FKG Y+E+ D E
Sbjct: 274 APQSAPTTTLFLGNLSFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVE 333
Query: 70 SVPLAM-GLNGQKLLG 84
+ A+ GLNG ++ G
Sbjct: 334 TAQKAVEGLNGVEIAG 349
>gi|405120919|gb|AFR95689.1| RNA splicing factor Pad-1 [Cryptococcus neoformans var. grubii H99]
Length = 588
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 149/337 (44%), Gaps = 91/337 (27%)
Query: 15 DARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLA 74
+AR+IF QLS R+ ++ L I Y+E + V A
Sbjct: 241 EARSIFVSQLSARMTSQVL------------------------GLIGYVELDSVDLVNKA 276
Query: 75 MGLNGQKLLGIPIIVQPTQAEKNRAGNTL-------PNLQPRGTGG-----------PM- 115
+ L+G ++GIPI + T+AE+N +G L N + G GG P+
Sbjct: 277 LALSGTVVMGIPINIMLTEAERNHSGTELITATALASNARSHGGGGRSSVPFTQNYPPLS 336
Query: 116 ----------------------RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTG 153
RL++ +L F++T D +R +FEPFG+I+ + L +D +G
Sbjct: 337 TGLDLPPGLDPDAHKDAAIPYHRLFVSNLAFSLTADDVRQVFEPFGEIEFVDLHMDL-SG 395
Query: 154 RSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLD-TDEMER 212
KG ++ F A+ A + + GF+LAGR +KV T+ +R G D ++
Sbjct: 396 LRKGTAYVQFKDVKSAQMALDAMAGFDLAGRLIKVQTIQER-----GTYQTPDLIEDSGN 450
Query: 213 AGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQV--SSSTAPPI-A 269
G L A R QLMFKLA N L+ S P++ S S P +
Sbjct: 451 YGTRLDANQRQQLMFKLA---------------RTEPNVNLSLSAPRINDSQSKVPAMDP 495
Query: 270 TQCFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHG 305
T ++ NMF+P ET WD+++ +DV E +K+G
Sbjct: 496 TPRIVVHNMFNPEEETERNWDLDLAEDVKGEVESKYG 532
>gi|432092444|gb|ELK25059.1| Putative RNA-binding protein 23 [Myotis davidii]
Length = 198
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 105/201 (52%), Gaps = 49/201 (24%)
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
MLRGIFE FGKI LM D DTGRSKGYGF+TF ++ A++A EQLNGFELAGRP++VG
Sbjct: 1 MLRGIFERFGKI---VLMKDSDTGRSKGYGFLTFSDSECARRALEQLNGFELAGRPVRVG 57
Query: 190 TVTDRNESVGGGPSNLDTDEMERAGVDLG-ATGRLQLMFKLAEGTGLE------------ 236
VT+R + GG + E ++LG A GRLQLM +LAEG ++
Sbjct: 58 HVTERLD--GGTDITFPDGDQE---LNLGSAGGRLQLMAELAEGARIQLPTTAAAAATAA 112
Query: 237 ---------------LPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQCFLLANMFDP 281
L PAA +AL+ A N + +A+Q F L+++ P
Sbjct: 113 QAAALQLNGAVHLGALNPAAPTALSPALNL------------ASQAVASQRFQLSSLLTP 160
Query: 282 ATETNPTWDVEIRDDVIEECN 302
T T V + D V+ E
Sbjct: 161 QTMQYET-VVPLEDSVVTEVT 180
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 101/184 (54%), Gaps = 2/184 (1%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D+ + + +TIF +LS + LE F+ G+V R+ T + +G ++ F
Sbjct: 299 DEAADDSASTKTIFVGKLSWNVDNDWLESEFAECGEVVSARVQMDRNTGKSRGFGFVTFA 358
Query: 67 DPESVPLAMGLNGQKLLGIPI-IVQPTQAEKNRAGNTLPNLQPRGTGGPMR-LYIGSLHF 124
PE+V A+ LNG+++ G PI I + + ++N+ T P L++G+L F
Sbjct: 359 SPEAVDKALELNGKEIDGRPINIDKSVEKDQNQVRERRAKAFGDATSAPSSVLFVGNLSF 418
Query: 125 NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
+ TED L +F +G + ++++ D ++GR KG+G++ F + AKKA E L G E+AGR
Sbjct: 419 DATEDQLWEVFSDYGSVKSVRMPTDRESGRPKGFGYVEFEDVESAKKAHEGLAGQEIAGR 478
Query: 185 PMKV 188
+++
Sbjct: 479 AVRL 482
>gi|213401557|ref|XP_002171551.1| gar2 [Schizosaccharomyces japonicus yFS275]
gi|211999598|gb|EEB05258.1| gar2 [Schizosaccharomyces japonicus yFS275]
Length = 449
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 101/189 (53%), Gaps = 7/189 (3%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
E ++ T+F +LS + L + F G V + R+I ++ R KG Y++F PE+
Sbjct: 201 ESGESCTVFVGRLSWNVDDEWLGKEFEEYGTVVNARVIMDGQSGRSKGFGYVDFDSPEAA 260
Query: 72 PLAMGLNGQK-----LLGIPIIV-QPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
A+ +NGQK ++ + I +P Q A N + + ++IG+L FN
Sbjct: 261 KAAVAVNGQKEIDGRMVNLDISTPRPAQNNNGFAQQRASNFGDKQSPPSDTVFIGNLSFN 320
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
TED +R F G+I +++L D ++GR KG+G++TF S D AK+ E +NG +AGRP
Sbjct: 321 ATEDDVRNAFSSCGEIQSVRLPTDMNSGRPKGFGYVTFDSIDAAKQCVE-MNGHFIAGRP 379
Query: 186 MKVGTVTDR 194
++ T R
Sbjct: 380 CRLDFSTPR 388
>gi|298708815|emb|CBJ30774.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 604
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 30/221 (13%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTR---------------RFK 58
RD RT+F QL+ ++ DL ++F +G+V +V ++ T R K
Sbjct: 77 RDQRTVFVNQLTMKVTEDDLAKYFGLLGEVNNVIMLRDKFTSRHKDGGDAMRGRALPRHK 136
Query: 59 GIAYIEFKDPESVPLAMGLNGQ--KLLGIPIIVQPTQAEKN-------RAGNTLPN--LQ 107
G AY+E K ESVP+ + LN + P++V+ ++AEKN +A N + L
Sbjct: 137 GFAYVEMKSLESVPVVLQLNERVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPTGHVILG 196
Query: 108 PRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSAD 167
++L+IG+LH NITED L I FG++ + L D + G SK + F+T+ +
Sbjct: 197 NAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRD-EAGESKRFAFVTYADTE 255
Query: 168 DAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTD 208
E+L+G E+AG+ + V +S+ P NLD +
Sbjct: 256 STNACLEKLDGLEVAGKALSVSYCKADPKSI---PKNLDAN 293
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 30/37 (81%)
Query: 270 TQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHGV 306
T C L+ NMFDPATET+ W+++I++++ EEC+KHG
Sbjct: 495 TFCLLVKNMFDPATETDEGWELDIKEEMEEECSKHGA 531
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 92/172 (53%), Gaps = 2/172 (1%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLN 78
+F QLS + L+ F S G+V R++ +++ +G Y+EF D ES A+ +
Sbjct: 198 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLESSAKAIEKD 257
Query: 79 GQKLLGIPIIVQ-PTQAEKNRAGNTLPNLQPRGTGGPMR-LYIGSLHFNITEDMLRGIFE 136
G ++ G I V TQ + N A + P L+IGSL F++TED + F
Sbjct: 258 GSEIDGRAIRVNYATQRKPNEAAEKRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFG 317
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
G + +++L D DTG KG+G++ F S DDA A + +NG E+AGR ++V
Sbjct: 318 QHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAALKAMNGAEIAGRAIRV 369
>gi|302843264|ref|XP_002953174.1| hypothetical protein VOLCADRAFT_105799 [Volvox carteri f.
nagariensis]
gi|300261561|gb|EFJ45773.1| hypothetical protein VOLCADRAFT_105799 [Volvox carteri f.
nagariensis]
Length = 556
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 87/175 (49%), Gaps = 29/175 (16%)
Query: 17 RTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG 76
RT+F LS R RD+ EFFS VG+V D+RLIT T++ +G+AY+EF E V A+
Sbjct: 79 RTVFAYNLSLRADERDIFEFFSKVGRVVDIRLITDKNTKKSRGLAYVEFSKVEEVISAVA 138
Query: 77 LNGQKLLGIPIIVQPTQAEKNRA----------------------------GNTLPNLQP 108
L G L G P++V+ ++AEKN A G N
Sbjct: 139 LTGNILKGQPVMVKASEAEKNMAWEAAQQQKHSAQAATHQLLSSLASSTGSGGKGTNQVA 198
Query: 109 RGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITF 163
GP L + +L + E ++ +F PFGK++ +QL D TGRS G ++ F
Sbjct: 199 LAGNGPCWLQVSNLVKELGEAEVQQLFAPFGKLEAVQLRRDA-TGRSTGIAYLKF 252
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 56/134 (41%), Gaps = 23/134 (17%)
Query: 204 NLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAA---ASALNLAQNAILNSS---- 256
LD D E G+ + A GR+ LM KLA GL PP + A N +A+L+
Sbjct: 352 ELDEDN-EGGGIKMSAQGRVALMTKLAGSAGLPAPPTSVLPAGVTNAVAHAVLSVDPVLL 410
Query: 257 TPQVSSSTAPPIATQCFLLANMF---------DPATETNPTWDVEIRDDVIEECNKHG-- 305
Q + PIAT C LL NMF E+ DV EEC++ G
Sbjct: 411 MQQGVLGPSSPIATPCLLLKNMFDAAASAGDAAAQNAAASVLAAEVEVDVREECSRFGEL 470
Query: 306 ----VGASTVCFIY 315
V A + F+Y
Sbjct: 471 LHVWVDAKSKGFVY 484
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 105/194 (54%), Gaps = 4/194 (2%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D + EE ++IF +LS + L + F+ G+V R+ T + +G Y+EF
Sbjct: 287 DAAAVEEEGTKSIFVGRLSWNVDNDWLAQEFAECGEVISARVQMDRNTGKSRGFGYVEFA 346
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGP---MRLYIGSLH 123
E+V A+ LNG+++ G P+ + ++ +K++ + G L++G+L
Sbjct: 347 TTEAVEAALLLNGKEIDGRPVNIDKSE-QKDKGAAREKRAEKFGDSASEPSAVLFVGNLS 405
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
++ TED + +F G + +++L D +TGR KG+G++ F + AKKA E L+G E+AG
Sbjct: 406 WDCTEDQVWEVFGEHGDVKSVRLPTDRETGRPKGFGYVEFTDIETAKKAFEGLSGTEVAG 465
Query: 184 RPMKVGTVTDRNES 197
RP+++ R+ S
Sbjct: 466 RPIRLDYSQPRDNS 479
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 92/172 (53%), Gaps = 2/172 (1%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLN 78
+F QLS + L+ F S G+V R++ +++ +G Y+EF D ES A+ +
Sbjct: 195 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLESSAKAIEKD 254
Query: 79 GQKLLGIPIIVQ-PTQAEKNRAGNTLPNLQPRGTGGPMR-LYIGSLHFNITEDMLRGIFE 136
G ++ G I V TQ + N A + P L+IGSL F++TED + F
Sbjct: 255 GSEIDGRAIRVNYATQRKPNEAAEKRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFG 314
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
G + +++L D DTG KG+G++ F S DDA A + +NG E+AGR ++V
Sbjct: 315 QHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAALKAMNGAEIAGRAIRV 366
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 96/177 (54%), Gaps = 8/177 (4%)
Query: 17 RTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG 76
+TIF LS + LE F+ G++ + T T R +G ++ F PE+V A+
Sbjct: 39 KTIFVGMLSWNVDNAWLESEFAQCGEIVSAHVQTDRNTGRSRGFGFVTFASPEAVDKALE 98
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGP-----MRLYIGSLHFNITEDML 131
LNG+++ G I V + EK++ N + + R G RL++G+L F+ TE+ L
Sbjct: 99 LNGKEIDGRSINVDKS-VEKDQ--NQVRERRARTFGDAPSEPSSRLFVGNLSFDATEEQL 155
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+F +G I ++ + D+GR KG+G++ F + AKKA E L G E+AGR +++
Sbjct: 156 WEVFSDYGSIKSVHMPTSRDSGRPKGFGYVEFEDIESAKKAHESLVGQEIAGRAIRL 212
>gi|294866432|ref|XP_002764713.1| RNA-binding protein rsd1, putative [Perkinsus marinus ATCC 50983]
gi|239864403|gb|EEQ97430.1| RNA-binding protein rsd1, putative [Perkinsus marinus ATCC 50983]
Length = 629
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 103/184 (55%), Gaps = 10/184 (5%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSV-GKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
R +RT+ QL + R + S + GKVRDV++I +++R KGIAY+EF++ ES
Sbjct: 262 RASRTVLIAQLGMDVSDRTVYLLMSKMAGKVRDVQIIRDGRSQRSKGIAYVEFEEQESAM 321
Query: 73 LAMGLNGQKL---LGIPIIVQPTQAEKNRAGNTLPNLQPRGTG-GPMRLYIG---SLHFN 125
A+G+ L LG +QP+QAEKN +T L P G RLY+G +L +
Sbjct: 322 KALGIEPTSLWTKLGHGANIQPSQAEKN-LNSTQAVLNPSGERVNECRLYVGGSANLVAD 380
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
++ED LR +F+PFG +D + + G Y F+ + +D A+ A + L+G + G+
Sbjct: 381 LSEDDLRALFQPFGPLDFVDRHP-RNQGEGGTYAFVQYGDSDHARSALKGLSGMMIGGKE 439
Query: 186 MKVG 189
+KVG
Sbjct: 440 LKVG 443
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 2/179 (1%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
EE +F QLS + L+ F S G+V R++ +++ +G Y+EF D E+
Sbjct: 189 EEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLEAS 248
Query: 72 PLAMGLNGQKLLGIPIIVQ-PTQAEKNRAGNTLPNLQPRGTGGPMR-LYIGSLHFNITED 129
A+ +G ++ G I V TQ + N A + P L+IGSL F++TED
Sbjct: 249 AKAIEKDGSEIDGRAIRVNYATQRKPNEAAEKRAKVFNDKQSPPAETLWIGSLSFSVTED 308
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+ F G + +++L D DTG KG+G++ F S +DA A + +NG E+AGR ++V
Sbjct: 309 QVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDASAALKAMNGAEIAGRAIRV 367
>gi|226288243|gb|EEH43755.1| 28 kDa ribonucleoprotein [Paracoccidioides brasiliensis Pb18]
Length = 492
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 6/185 (3%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-- 76
+F LS + L F G++ VR++T T R KG Y+EF + E A
Sbjct: 249 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDTGRSKGFGYVEFTNAEDAVKAHAAK 308
Query: 77 ----LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
L+G+KL + A ++RA + N + + L+IG++ F+ E+M+
Sbjct: 309 KDTELDGRKLNVDFANARSNAAPRDRAQSRAQNFGDQRSPESDTLFIGNIAFSADENMIS 368
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
F +G I ++L DP++GR KG+G++ F S D+A+ A E LNG ELAGR M++ T
Sbjct: 369 ETFAEYGSILGVRLPTDPESGRPKGFGYVQFSSIDEARSAFESLNGSELAGRAMRLDFST 428
Query: 193 DRNES 197
R S
Sbjct: 429 PRQNS 433
>gi|294881541|ref|XP_002769399.1| RNA-binding protein rsd1, putative [Perkinsus marinus ATCC 50983]
gi|239872808|gb|EER02117.1| RNA-binding protein rsd1, putative [Perkinsus marinus ATCC 50983]
Length = 629
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 103/184 (55%), Gaps = 10/184 (5%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSV-GKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
R +RT+ QL + R + S + GKVRDV++I +++R KGIAY+EF++ ES
Sbjct: 262 RASRTVLIAQLGMDVSDRTVYLLMSKMAGKVRDVQIIRDGRSQRSKGIAYVEFEEQESAM 321
Query: 73 LAMGLNGQKL---LGIPIIVQPTQAEKNRAGNTLPNLQPRGTG-GPMRLYIG---SLHFN 125
A+G+ L LG +QP+QAEKN +T L P G RLY+G +L +
Sbjct: 322 KALGIEPTSLWTRLGHGANIQPSQAEKN-LNSTQAVLNPSGERVNECRLYVGGSANLVAD 380
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
++ED LR +F+PFG +D + + G Y F+ + +D A+ A + L+G + G+
Sbjct: 381 LSEDDLRALFQPFGPLDFVDRHP-RNQGEGGTYAFVQYGDSDHARSALKGLSGMMIGGKE 439
Query: 186 MKVG 189
+KVG
Sbjct: 440 LKVG 443
>gi|258575439|ref|XP_002541901.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902167|gb|EEP76568.1| predicted protein [Uncinocarpus reesii 1704]
Length = 503
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 2 RPAYSDDL---------SPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCN 52
R A SD++ S E + +F LS + L F S G++ VR++T
Sbjct: 241 RKAESDEVPVTKKAKKDSDESNASANLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDR 300
Query: 53 KTRRFKGIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGT 111
+ R +G Y+EF + E A G +L G P+ + A +N AG Q R
Sbjct: 301 DSGRSRGFGYVEFTNAEDAAKAFEAKKGAELDGRPLNLDYANARQN-AGGAKDRSQARAK 359
Query: 112 G-----GPMR--LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFH 164
P L+IG++ F E+ ++ F +G I I+L DP++GR KG+G+I F
Sbjct: 360 SFGDQTSPESDTLFIGNISFGADENAIQETFSSYGTISGIRLPTDPESGRPKGFGYIQFS 419
Query: 165 SADDAKKAQEQLNGFELAGRPMKVGTVTDRNES 197
S D+A+ A +L G ELAGR M++ T R S
Sbjct: 420 SVDEARSALNELQGSELAGRAMRLDFSTPRQNS 452
>gi|225683278|gb|EEH21562.1| nuclear localization sequence-binding protein [Paracoccidioides
brasiliensis Pb03]
Length = 492
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 95/185 (51%), Gaps = 6/185 (3%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-- 76
+F LS + L F G++ VR++T + R KG Y+EF + E A
Sbjct: 249 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSKGFGYVEFTNAEDAVKAHAAK 308
Query: 77 ----LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
L+G+KL + A ++RA + N + + L+IG++ F+ E+M+
Sbjct: 309 KDTELDGRKLNVDFANARSNAAPRDRAQSRAQNFGDQRSPESDTLFIGNIAFSADENMIS 368
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
F +G I ++L DP++GR KG+G++ F S D+A+ A E LNG ELAGR M++ T
Sbjct: 369 ETFAEYGSILGVRLPTDPESGRPKGFGYVQFSSIDEARSAFESLNGSELAGRAMRLDFST 428
Query: 193 DRNES 197
R S
Sbjct: 429 PRQNS 433
>gi|295672357|ref|XP_002796725.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283705|gb|EEH39271.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 474
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 94/185 (50%), Gaps = 6/185 (3%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-- 76
+F LS + L F G++ VR++T + R KG Y+EF + E A
Sbjct: 233 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSKGFGYVEFTNAEDAVKAHAAK 292
Query: 77 ----LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
L+G+KL + A ++RA + N + + L+IG++ F+ E M+
Sbjct: 293 KDTELDGRKLNVDFANARSNAAPRDRAQSRAQNFGDQKSPESDTLFIGNIAFSADESMIS 352
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
F +G I ++L DP++GR KG+G++ F S D+A+ A E LNG ELAGR M++ T
Sbjct: 353 ETFAEYGSILGVRLPTDPESGRPKGFGYVQFSSIDEARSAFESLNGSELAGRAMRLDFST 412
Query: 193 DRNES 197
R S
Sbjct: 413 PRQNS 417
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 93/179 (51%), Gaps = 2/179 (1%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+E +F QLS + L+ F S G+V R++ +++ +G Y+EF D S
Sbjct: 191 DEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLGSS 250
Query: 72 PLAMGLNGQKLLGIPIIVQ-PTQAEKNRAGNTLPNLQPRGTGGPMR-LYIGSLHFNITED 129
A+ +G ++ G I V TQ + N A + P L+IGSL F++TED
Sbjct: 251 AKAIEKDGSEIDGRAIRVNYATQRKPNEAAEKRARVFNDKQSPPAETLWIGSLSFSVTED 310
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+ F G + +++L D DTG KG+G++ F S DDA A + +NG E+AGR ++V
Sbjct: 311 QVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDATAALKAMNGAEIAGRAIRV 369
>gi|19114443|ref|NP_593531.1| nucleolar protein required for rRNA processing [Schizosaccharomyces
pombe 972h-]
gi|6226864|sp|P41891.2|GAR2_SCHPO RecName: Full=Protein gar2
gi|7523472|emb|CAB86413.1| nucleolar protein required for rRNA processing [Schizosaccharomyces
pombe]
Length = 500
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 2 RPAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIA 61
RPA S + + T+F +LS + + L + F G + R+I ++ R KG
Sbjct: 248 RPAKITKPSQDSNETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYG 307
Query: 62 YIEFKDPESVPLAMGLNGQKL---------LGIPIIVQPTQAEKNRAGNTLPNL-QPRGT 111
Y++F+ PE+ A+ NG K L P P + RAGN L +P T
Sbjct: 308 YVDFETPEAAKAAVAANGTKEIDGRMVNLDLSNPRPANPQPYAQQRAGNFGDQLSEPSDT 367
Query: 112 GGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKK 171
+++G+L FN TED L F G I +I+L DP +GR KG+G++TF D AKK
Sbjct: 368 -----VFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKK 422
Query: 172 AQEQLNGFELAGRPMKVGTVTDR 194
E +NG +AGRP ++ T R
Sbjct: 423 CVE-MNGHFIAGRPCRLDFSTPR 444
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 93/192 (48%), Gaps = 9/192 (4%)
Query: 16 ARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY--IEFKDPESVPL 73
A TI+ L QR+ L E F++VG+V V++I+ K F + Y +EF DP
Sbjct: 17 ATTIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFVEFADPRVAEQ 76
Query: 74 AM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQ--PRGTGGPMRLYIGSLHFNITEDM 130
A+ +NG+K+ I Q + N P LQ T +++G L I ++
Sbjct: 77 AIQDMNGRKIFNYEIRANWAQP----SANINPPLQMTKEDTTNHFHVFVGDLAAEINDEK 132
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
L F FG + +M DP +G+S+G+GF+ F DA++A +NG L RP++
Sbjct: 133 LAQAFSEFGTMSEAHVMWDPLSGKSRGFGFVAFRDKTDAERAIATMNGEWLGTRPIRCNW 192
Query: 191 VTDRNESVGGGP 202
T + ++ P
Sbjct: 193 ATQKGQTAMPAP 204
>gi|452989554|gb|EME89309.1| hypothetical protein MYCFIDRAFT_149907 [Pseudocercospora fijiensis
CIRAD86]
Length = 500
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 92/173 (53%), Gaps = 12/173 (6%)
Query: 30 TRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GLNGQKLLGIPII 88
TR+ EEF G+++ VR+IT + R KG Y+EF++ E A+ NG +L I
Sbjct: 262 TREFEEF----GELKGVRIITDRDSGRSKGFGYVEFENAEDAAKALEAKNGAELDNRAIR 317
Query: 89 VQPTQAEKNRAGN-------TLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKI 141
+ + +N A N + + L++G+L F+ TEDM+R FE G I
Sbjct: 318 LDFSVPRQNNAQNPQQRGQERRQQYGDKASEPSQTLFVGNLSFDATEDMVREYFEEHGSI 377
Query: 142 DNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDR 194
+ I+L D ++G KG+G++ S D+AK A E L G +L GRPM++ T R
Sbjct: 378 NGIRLPTDRESGAPKGFGYVEMGSIDEAKAAYEALQGADLGGRPMRLDYSTPR 430
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 5/104 (4%)
Query: 90 QPTQAEKNRAGNTLPNLQPRG--TGGPM---RLYIGSLHFNITEDMLRGIFEPFGKIDNI 144
+P K R + P P+ T P L+IG+L +N+ E+ L FE FG++ +
Sbjct: 215 KPKADSKKRKADEEPEQSPKKAKTEDPNVTGNLFIGNLSWNVDEEWLTREFEEFGELKGV 274
Query: 145 QLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+++ D D+GRSKG+G++ F +A+DA KA E NG EL R +++
Sbjct: 275 RIITDRDSGRSKGFGYVEFENAEDAAKALEAKNGAELDNRAIRL 318
>gi|663262|emb|CAA88179.1| gar2 [Schizosaccharomyces pombe]
Length = 500
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 2 RPAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIA 61
RPA S + + T+F +LS + + L + F G + R+I ++ R KG
Sbjct: 248 RPAKITKPSQDSNETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYG 307
Query: 62 YIEFKDPESVPLAMGLNGQKL---------LGIPIIVQPTQAEKNRAGNTLPNL-QPRGT 111
Y++F+ PE+ A+ NG K L P P + RAGN L +P T
Sbjct: 308 YVDFETPEAAKAAVAANGTKEIDGRMVNLDLPNPRPANPQPYAQQRAGNFGDQLSEPSDT 367
Query: 112 GGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKK 171
+++G+L FN TED L F G I +I+L DP +GR KG+G++TF D AKK
Sbjct: 368 -----VFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKK 422
Query: 172 AQEQLNGFELAGRPMKVGTVTDR 194
E +NG +AGRP ++ T R
Sbjct: 423 CVE-MNGHFIAGRPCRLDFSTPR 444
>gi|254567738|ref|XP_002490979.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|238030776|emb|CAY68699.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|328352488|emb|CCA38887.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Komagataella pastoris CBS 7435]
Length = 626
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 8/195 (4%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
IF L I + L + FSS GKV ++ T ++ KG ++ ++ E+ A+ +
Sbjct: 142 IFIKNLDPAIENKTLHDTFSSFGKVLSCKVAT-DENGNSKGFGFVHYESDEAAQAAIENI 200
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG L G I V P A+K+R ++ +++ + TED LR +FE
Sbjct: 201 NGMLLNGREIYVGPHLAKKDRESRFQEMIK-----NYTNVFVKNFDTESTEDELRELFES 255
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES 197
+G I +I L VD + G +KG+GF+ F DDA KA E LN E G+P+ VG +NE
Sbjct: 256 YGPITSIHLQVDSE-GHNKGFGFVNFAEHDDAVKAVEALNDKEYKGKPLYVGRAQKKNER 314
Query: 198 VGGGPSNLDTDEMER 212
V + D +E+
Sbjct: 315 VHELTKKYEADRLEK 329
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 21/196 (10%)
Query: 3 PAYSDDLSPEERDART--------IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
PA S + + E ++ T ++ +L + DL EFFS +G V +R+ T
Sbjct: 30 PATSTEAAEESNESSTQASETLASLYVGELDPTVTESDLYEFFSPIGSVNSIRVCRDAVT 89
Query: 55 RRFKGIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGG 113
+R G Y+ F + A+ LN ++ G+ + +Q + P+L+ G+G
Sbjct: 90 KRSLGYGYVNFHSQAAGERALEELNYAEIKGVRCRLMWSQRD--------PSLRRSGSGN 141
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
++I +L I L F FGK+ + ++ D + G SKG+GF+ + S + A+ A
Sbjct: 142 ---IFIKNLDPAIENKTLHDTFSSFGKVLSCKVATD-ENGNSKGFGFVHYESDEAAQAAI 197
Query: 174 EQLNGFELAGRPMKVG 189
E +NG L GR + VG
Sbjct: 198 ENINGMLLNGREIYVG 213
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 14/185 (7%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD-PESVP 72
++ +F +L E F S G + + L ++ KG ++ F + ++V
Sbjct: 230 KNYTNVFVKNFDTESTEDELRELFESYGPITSIHLQVDSEGHN-KGFGFVNFAEHDDAVK 288
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRA--------GNTLPNLQPRGTGGPMRLYIGSLHF 124
LN ++ G P+ V Q + R + L LQ + + L+I +L
Sbjct: 289 AVEALNDKEYKGKPLYVGRAQKKNERVHELTKKYEADRLEKLQKYQS---VNLFIKNLDE 345
Query: 125 NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
+I + L F+PFG I + ++M+D + G+S+G+GF+ + ++A KA ++N +A +
Sbjct: 346 SIDDARLEEEFKPFGTITSAKVMLD-ENGKSRGFGFVCLSTPEEATKAISEMNQRMVANK 404
Query: 185 PMKVG 189
P+ V
Sbjct: 405 PLYVA 409
>gi|406700097|gb|EKD03282.1| hypothetical protein A1Q2_02392 [Trichosporon asahii var. asahii
CBS 8904]
Length = 387
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
E+ T+F LS I L F+S G+V R++ T+R +G Y+EF D +S
Sbjct: 199 EQEATNTVFVGGLSWNIDNDWLASEFASCGEVVSARIVLDRDTQRSRGFGYVEFADVDSA 258
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDML 131
A+ G++L G + V A K A + + L+IGSL F+ TED +
Sbjct: 259 IKAIEFEGKELDGRAVRVNFANARKPDADKRAKVFNDKRSPPADTLWIGSLPFDTTEDHI 318
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
F +G + +++L D +TG +KG+G++TF A A E LNG E R +++
Sbjct: 319 YETFGEYGDVQSVRLPTDRETGAAKGFGYVTFGDVAQATAALEALNGSEFGSRRIRI 375
>gi|350646433|emb|CCD58930.1| fuse-binding protein-interacting repressor siahbp1, putative
[Schistosoma mansoni]
Length = 522
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 98/174 (56%), Gaps = 6/174 (3%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
I+ +S I ++ + FS G ++ V L ++ KG A++EF+ PE+ LA+ +
Sbjct: 95 IYVGSISFEIGEEEIRKTFSPFGPIKSVALSWDTVLQKHKGFAFVEFEVPEAASLALDQM 154
Query: 78 NGQKLLGIPIIV-QPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
NG L G + V +P+ A + A L+ + P R+YI S+H +TE ++ +FE
Sbjct: 155 NGYTLAGRNLKVGRPSNAPQTAALEA--ELRAEVSTKP-RVYIASVHPELTESDIQTVFE 211
Query: 137 PFGKIDNIQLMVDPD-TGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGK+++ L DP +GR +G+G+I F S + A A +N F+LAG+ ++VG
Sbjct: 212 AFGKVNSCSLYPDPKCSGRHRGFGYIDFESEEAAIAAVSSMNCFDLAGQQLRVG 265
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F I E+ +R F PFG I ++ L D + KG+ F+ F + A A +Q
Sbjct: 94 RIYVGSISFEIGEEEIRKTFSPFGPIKSVALSWDTVLQKHKGFAFVEFEVPEAASLALDQ 153
Query: 176 LNGFELAGRPMKVG 189
+NG+ LAGR +KVG
Sbjct: 154 MNGYTLAGRNLKVG 167
>gi|256073105|ref|XP_002572873.1| fuse-binding protein-interacting repressor siahbp1 [Schistosoma
mansoni]
Length = 534
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 98/174 (56%), Gaps = 6/174 (3%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
I+ +S I ++ + FS G ++ V L ++ KG A++EF+ PE+ LA+ +
Sbjct: 107 IYVGSISFEIGEEEIRKTFSPFGPIKSVALSWDTVLQKHKGFAFVEFEVPEAASLALDQM 166
Query: 78 NGQKLLGIPIIV-QPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
NG L G + V +P+ A + A L+ + P R+YI S+H +TE ++ +FE
Sbjct: 167 NGYTLAGRNLKVGRPSNAPQTAALEA--ELRAEVSTKP-RVYIASVHPELTESDIQTVFE 223
Query: 137 PFGKIDNIQLMVDPD-TGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGK+++ L DP +GR +G+G+I F S + A A +N F+LAG+ ++VG
Sbjct: 224 AFGKVNSCSLYPDPKCSGRHRGFGYIDFESEEAAIAAVSSMNCFDLAGQQLRVG 277
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F I E+ +R F PFG I ++ L D + KG+ F+ F + A A +Q
Sbjct: 106 RIYVGSISFEIGEEEIRKTFSPFGPIKSVALSWDTVLQKHKGFAFVEFEVPEAASLALDQ 165
Query: 176 LNGFELAGRPMKVG 189
+NG+ LAGR +KVG
Sbjct: 166 MNGYTLAGRNLKVG 179
>gi|226467496|emb|CAX69624.1| Poly U-binding-splicing factor half pint [Schistosoma japonicum]
Length = 411
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 6/174 (3%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
I+ +S I ++ + FS G ++ V L ++ KG A++EF+ PE+ LA+ +
Sbjct: 95 IYVGSISFEIGEEEIRKTFSPFGPIKSVALSWDTVLQKHKGFAFVEFEVPEAASLALEQM 154
Query: 78 NGQKLLGIPIIV-QPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
NG L G + V +P+ A + A L+ + P R+YI S+H +TE ++ +FE
Sbjct: 155 NGYTLAGRNLKVGRPSNAPQTAALEA--ELRAESSTKP-RVYIASVHPELTESDIQTVFE 211
Query: 137 PFGKIDNIQLMVDPDT-GRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGK+++ L DP GR +G+G+I F S + A A +N F+LAG+ ++VG
Sbjct: 212 AFGKVNSCSLYPDPKCPGRHRGFGYIDFESEEAAIAAVSSMNCFDLAGQQLRVG 265
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F I E+ +R F PFG I ++ L D + KG+ F+ F + A A EQ
Sbjct: 94 RIYVGSISFEIGEEEIRKTFSPFGPIKSVALSWDTVLQKHKGFAFVEFEVPEAASLALEQ 153
Query: 176 LNGFELAGRPMKVG 189
+NG+ LAGR +KVG
Sbjct: 154 MNGYTLAGRNLKVG 167
>gi|294932839|ref|XP_002780467.1| RNA-binding region-containing protein, putative [Perkinsus marinus
ATCC 50983]
gi|239890401|gb|EER12262.1| RNA-binding region-containing protein, putative [Perkinsus marinus
ATCC 50983]
Length = 571
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 16/190 (8%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSS-VGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
R +RT+ QL + R + S GKVRDV++I +++R KGIAY+EF+D S
Sbjct: 203 RASRTVLIAQLGMDVTDRTVYLVMSKQAGKVRDVQIIRDGRSQRSKGIAYVEFEDQNSAV 262
Query: 73 LAMGLNGQKL---LGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM----RLYIG---SL 122
A+G+ L LG +QP+QAE+ N P+ G RLY+G +L
Sbjct: 263 KALGIEPTSLWTKLGHGANIQPSQAER----NLYPSQSVSNAYGERVNECRLYVGGSANL 318
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
+++ED LR +F+PFG +D + + G Y F+ + ++ A+ A + L+G +
Sbjct: 319 VADLSEDDLRALFQPFGPLDFVDRHP-RNQGEGGTYAFVQYGDSEHARSALKGLSGMMIG 377
Query: 183 GRPMKVGTVT 192
G+ +KVG T
Sbjct: 378 GKELKVGMAT 387
>gi|358339509|dbj|GAA27913.2| poly(U)-binding-splicing factor PUF60-B [Clonorchis sinensis]
Length = 512
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 6/173 (3%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
I+ +S + +L F G ++ V L ++ KG A++EF+ PE+ LA+ +
Sbjct: 94 IYVGSISFEVGEDELRRTFGPFGPIKSVALSWDATLQKHKGFAFVEFEVPEAASLALEQM 153
Query: 78 NGQKLLGIPIIV-QPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
NG L G + V +P+ A + GN L+ R+Y+ S+H +TE ++ +FE
Sbjct: 154 NGHTLAGRTLKVGRPSNAPQT--GNLESELR-SDENTRCRVYVASVHPELTEADMQTVFE 210
Query: 137 PFGKIDNIQLMVDPDT-GRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
FGK++ L DP GR +G+G+I FHS ++A A +NGF+LAG ++V
Sbjct: 211 AFGKVEECLLYPDPKCPGRHRGFGYIYFHSEEEAIAAVTSMNGFDLAGLQLRV 263
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F + ED LR F PFG I ++ L D + KG+ F+ F + A A EQ
Sbjct: 93 RIYVGSISFEVGEDELRRTFGPFGPIKSVALSWDATLQKHKGFAFVEFEVPEAASLALEQ 152
Query: 176 LNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGV 215
+NG LAGR +KVG ++ ++ G S L +DE R V
Sbjct: 153 MNGHTLAGRTLKVGRPSNAPQT-GNLESELRSDENTRCRV 191
>gi|195611722|gb|ACG27691.1| ribonucleoprotein [Zea mays]
Length = 341
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 4/211 (1%)
Query: 4 AYSDDLS--PEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIA 61
AYS S P D +F L + +L + FS G+V D ++I T R +G A
Sbjct: 97 AYSSPRSRPPRGDDPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFA 156
Query: 62 YIEFKDPESVPLAMGL-NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIG 120
++ E A+ + +G L G V + + T+ R G ++Y G
Sbjct: 157 FVTMATAEEAAKAIQMFDGALLGGRTARVNYPEVPRGGERRTVTMSGRRRDDGTYKIYAG 216
Query: 121 SLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFE 180
+L + + D LR +FE + + +++ + +TGRS+G+GF++F +A+DA+ A E L+G E
Sbjct: 217 NLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALESLDGVE 276
Query: 181 LAGRPMKVGTVTDRNESVGGGPSNLDTDEME 211
L GRP+++ ++ ++N G PS + E
Sbjct: 277 LEGRPLRL-SLAEQNPPPGSPPSTAQAQQEE 306
>gi|74137263|dbj|BAE22009.1| unnamed protein product [Mus musculus]
Length = 169
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 63/97 (64%), Gaps = 15/97 (15%)
Query: 223 LQLMFKLAEGTGLELPPAAASAL----NLAQNAILNSSTPQVSSST----------APPI 268
LQLM +LAEGTGL++PPAA AL +LA A+ + T ++S T P+
Sbjct: 2 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQT-RLSQQTEASALAAAASVQPL 60
Query: 269 ATQCFLLANMFDPATETNPTWDVEIRDDVIEECNKHG 305
ATQCF L+NMF+P TE WD EI+DDVIEECNKHG
Sbjct: 61 ATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHG 97
>gi|209881578|ref|XP_002142227.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209557833|gb|EEA07878.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 533
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 143/323 (44%), Gaps = 49/323 (15%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
I+ L + DL + F S G + ++ + + R KG +IE+ ES +A+ +
Sbjct: 158 IYVGSLDYSLSEADLRQVFGSFGTIVNIDM--PREGNRSKGFCFIEYTTQESAEMALATM 215
Query: 78 NGQKLLGIPIIV-QPTQA-------EKNRAGNT-----LPNLQPRGTGGPM--------- 115
N L G PI V +PT A N GN +P L P T +
Sbjct: 216 NRFVLKGRPIKVGRPTNAIVSNNQNNNNSMGNHTGMVGMPVLPPENTNANIPPHQIPQNP 275
Query: 116 ---RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDT-GRSKGYGFITFHSADDAKK 171
R+YIGS+ ++ T D LR IF+ FG I + QL+ + G +GYGFI F + D AK
Sbjct: 276 PQNRIYIGSVPYSFTPDDLRHIFKAFGVILSCQLIPSVEKPGTHRGYGFIEFGTPDQAKL 335
Query: 172 AQEQLNGFELAGRPMKVGTVTDRNESVGGGPSN-LDTDEMERAGVDLGATGRLQLMFKLA 230
A E +NGFE+ G+ +KV T PSN + ++++ L Q+ LA
Sbjct: 336 AIETMNGFEVGGKQLKVNVAT------ALKPSNSISSNQIPIVSPTLQNVMSQQIPPTLA 389
Query: 231 EGTGLELPP--AAASALNLAQNAILNSSTPQVSSSTAPPIA------TQCFLLANMFDPA 282
+ +PP + + L N + P + + PI + LL NM P
Sbjct: 390 IPPTMAIPPVLSMPNVTPLPPNLYQPPNIPVPYPANSYPIIPNSTSNSNVILLTNMIGPE 449
Query: 283 TETNPTWDVEIRDDVIEECNKHG 305
D E++++V EC+K+G
Sbjct: 450 -----EVDDELKEEVKIECSKYG 467
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 96/175 (54%), Gaps = 3/175 (1%)
Query: 17 RTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK-DPESVPLAM 75
+T++ QLS + L+ F G V D R+ + R +G Y++F E++ +
Sbjct: 394 KTLWVGQLSWNVDNDWLKSEFEQYGTVLDARVQCDRDSGRSRGFGYVDFATSAEALRASK 453
Query: 76 GLNGQKLLG--IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRG 133
+G++L G + + +QP + ++RA + + + + L+IG L + +TED +
Sbjct: 454 EAHGKELDGRALRVDLQPARGPQDRAESRAKHFKDERSAPSNTLFIGGLAWALTEDDIWN 513
Query: 134 IFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
F FG++ ++L + D+GR KG+G++ F S D+A KA E +NG L GRP+++
Sbjct: 514 AFAEFGEVTGVRLPKEIDSGRPKGFGYVEFVSQDNAAKALETMNGQALGGRPIRI 568
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%)
Query: 94 AEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTG 153
A + T N P G L++G L +N+ D L+ FE +G + + ++ D D+G
Sbjct: 373 ASSTKKSKTDSNENPTHDNGIKTLWVGQLSWNVDNDWLKSEFEQYGTVLDARVQCDRDSG 432
Query: 154 RSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
RS+G+G++ F ++ +A +A ++ +G EL GR ++V
Sbjct: 433 RSRGFGYVDFATSAEALRASKEAHGKELDGRALRV 467
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 99/176 (56%), Gaps = 28/176 (15%)
Query: 30 TRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM------GLNGQKL- 82
TR+ EEF G ++ VR+IT + R KG Y+EF+ + A+ L+ ++L
Sbjct: 270 TREFEEF----GAIKAVRVITDRDSGRSKGYGYVEFESADDAAKALEARHGYTLDNRELR 325
Query: 83 --LGIPIIVQ-----PTQAEKNRA---GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
LG P + P Q +R G+T P+ QP T L++G++ F+ T+DM+
Sbjct: 326 VDLGTPRAQRNDGQTPQQRSNDRQKQYGDT-PS-QPSAT-----LFVGNISFDATQDMVT 378
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+F+ +G I+ ++L D +TG KG+G++ F S ++AK A E L G ++AGRP+++
Sbjct: 379 EVFQEYGSINAVRLPTDRETGAPKGFGYVEFSSIEEAKSAMENLTGVDIAGRPIRL 434
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 93 QAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDT 152
+AE P TG L++G+L +N+ E+ L FE FG I ++++ D D+
Sbjct: 234 EAEPEETSKKTKTEDPAATGN---LFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDRDS 290
Query: 153 GRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDR 194
GRSKGYG++ F SADDA KA E +G+ L R ++V T R
Sbjct: 291 GRSKGYGYVEFESADDAAKALEARHGYTLDNRELRVDLGTPR 332
>gi|196009954|ref|XP_002114842.1| hypothetical protein TRIADDRAFT_64128 [Trichoplax adhaerens]
gi|190582904|gb|EDV22976.1| hypothetical protein TRIADDRAFT_64128 [Trichoplax adhaerens]
Length = 620
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 96/173 (55%), Gaps = 5/173 (2%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
I+ +S +R +++ FS G ++++ L T + KG A+IEF+ PE+ LA+ +
Sbjct: 168 IYVGSISFDLREDHIKQTFSPFGPIKNINLSWDTVTMKHKGFAFIEFETPEAAQLALEQM 227
Query: 78 NGQKLLGIPIIV-QPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
NGQ + G I V +PTQ + AG + ++ R+Y+ S+H +++E ++ +FE
Sbjct: 228 NGQLMGGRNIKVGRPTQMPQ--AGPLIQQIEEEAKNYA-RIYVASVHPDLSESDIKSVFE 284
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + + +D TG+ +GY +I A A +N F+L G+ ++VG
Sbjct: 285 AFGKIKSCTMPLDNITGKHRGYCYIELDGLQSAMDAIASMNMFDLGGQYLRVG 337
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%)
Query: 107 QPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSA 166
Q R R+Y+GS+ F++ ED ++ F PFG I NI L D T + KG+ FI F +
Sbjct: 158 QQRALALMCRIYVGSISFDLREDHIKQTFSPFGPIKNINLSWDTVTMKHKGFAFIEFETP 217
Query: 167 DDAKKAQEQLNGFELAGRPMKVG 189
+ A+ A EQ+NG + GR +KVG
Sbjct: 218 EAAQLALEQMNGQLMGGRNIKVG 240
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 103/197 (52%), Gaps = 19/197 (9%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+E +++TIF +LS + L F+ G+V R+ T + +G ++EF D SV
Sbjct: 338 QEEESKTIFVGRLSWNVDDDQLASEFAECGEVVSARVNIDRNTGKSRGFGHVEFADASSV 397
Query: 72 PLAMG-LNGQKLLGIPIIV------QPTQAEKNRA---GNTLPNLQPRGTGGPMR-LYIG 120
A+ +NG+++ G P+ V Q +NRA G++ T P L++G
Sbjct: 398 QKAIDTMNGKEIDGRPVNVDRAPGLNKNQQRENRAKAFGDS--------TSAPSSVLFVG 449
Query: 121 SLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFE 180
+L ++ TED + F G++ +++L D ++GR KG+G++ F D AK A E L+G E
Sbjct: 450 NLSWDATEDAVWEAFGEHGEVKSVRLPTDRESGRPKGFGYVEFVDVDAAKAAFEALSGTE 509
Query: 181 LAGRPMKVGTVTDRNES 197
+ GR +++ R+ S
Sbjct: 510 IGGRSIRLDYSQPRDNS 526
>gi|170091988|ref|XP_001877216.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648709|gb|EDR12952.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 218
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 17/188 (9%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLN 78
+F QLS + L + F+ G++ + T + +G Y+ F P++V A+ +N
Sbjct: 1 VFVGQLSWAVDNDRLAQEFADCGEIESATVQMDRNTGKSRGFGYVHFTTPDAVEKALQMN 60
Query: 79 GQKLLGIPIIVQ------PTQAEKNRA---GNTLPNLQPRGTGGPMRLYIGSLHFNITED 129
GQ++ G I V +Q + RA G+ + P T L++G+L F +TED
Sbjct: 61 GQEIDGRAIKVDRSLPRDKSQVREKRAQAFGDEVS--APSST-----LFVGNLSFGVTED 113
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
+ F +G + +++L D +TGR KG+G++ F D AKKA E NG E+ GR +++
Sbjct: 114 TVWSFFNDYG-VKSVRLPTDRETGRPKGFGYVEFEDIDGAKKAFEAANGSEIEGRSIRLD 172
Query: 190 TVTDRNES 197
R+ S
Sbjct: 173 YSQPRDSS 180
>gi|239608318|gb|EEQ85305.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ER-3]
gi|327349518|gb|EGE78375.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ATCC 18188]
Length = 512
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 6/192 (3%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
E + +F LS + L F G++ VR++T + R +G Y+EF +
Sbjct: 256 ESSEGGNLFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTDRDSGRSRGFGYVEFVNAADA 315
Query: 72 PLA------MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
A + L+G+KL + A + RA + N + + L+IG++ F+
Sbjct: 316 AKAHAAKKDVELDGRKLNIDFANARSNAAPRERAQSRAQNFGDQASPESDTLFIGNISFS 375
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
E+M+ F G I ++L DP++GR KG+G++ F S D+A+ A + LNG +L GRP
Sbjct: 376 ADENMISEAFSEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQTLNGADLGGRP 435
Query: 186 MKVGTVTDRNES 197
M++ T R S
Sbjct: 436 MRLDFSTPRQNS 447
>gi|389744282|gb|EIM85465.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 564
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGL 77
TIF +LS + L+ F G+V R+ T + +G Y+EF P++V A+ L
Sbjct: 301 TIFVGRLSWNVDNDWLKSEFEECGEVVSARVQMDRNTGKSRGFGYVEFTSPDAVEAALKL 360
Query: 78 NGQKLLGIPIIV-QPTQAEKNRAGNTLPNL------QPRGTGGPMRLYIGSLHFNITEDM 130
G+++ G PI V + T K++ ++ +P T L++G+L F+ +ED+
Sbjct: 361 TGKEIDGRPINVDKSTGVSKDKVRDSRAKAFGDQKSEPSST-----LFVGNLSFSASEDV 415
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
L F +G + +++ D +TG+ KG+ ++ F + AKKA ++ G ++AGR +++
Sbjct: 416 LWEAFASYGDVKGVRMPTDRETGQPKGFAYVDFTDIESAKKAHDEGAGMDIAGRAVRL 473
>gi|261203287|ref|XP_002628857.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239586642|gb|EEQ69285.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
Length = 510
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF------ 65
E + +F LS + L F G++ VR++T + R +G Y+EF
Sbjct: 254 ESSEGGNLFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTDRDSGRSRGFGYVEFVDAADA 313
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
+ + L+G+KL + A + RA + N + + L+IG++ F+
Sbjct: 314 AKAHAAKKDVELDGRKLNIDFANARSNAAPRERAQSRAQNFGDQASPESDTLFIGNISFS 373
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
E+M+ F G I ++L DP++GR KG+G++ F S D+A+ A + LNG +L GRP
Sbjct: 374 ADENMISEAFSEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQTLNGADLGGRP 433
Query: 186 MKVGTVTDRNES 197
M++ T R S
Sbjct: 434 MRLDFSTPRQNS 445
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 94/184 (51%), Gaps = 9/184 (4%)
Query: 10 SPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPE 69
S + D++T+F +LS + L + F+ G+V R+ T + +G ++EF E
Sbjct: 314 SDSQEDSKTVFVGRLSWNVDNDWLAQEFADCGEVVSARVQMDRNTGKSRGFGFVEFATAE 373
Query: 70 SVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR-----LYIGSLHF 124
A+ LNGQK I + +K A P + + G L++G++ F
Sbjct: 374 GANAAVALNGQK----EIDGRAVNLDKTSAKPADPERRAKAFGDSTSAPSSVLFVGNVSF 429
Query: 125 NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
++TED L +F +G++ +++L D DT R KGYG++ F + AKKA E G ++ GR
Sbjct: 430 DMTEDGLWEVFAEYGEVKSVRLPTDRDTQRLKGYGYVEFVDVESAKKAFEGARGMDVGGR 489
Query: 185 PMKV 188
+++
Sbjct: 490 TIRL 493
>gi|384247365|gb|EIE20852.1| hypothetical protein COCSUDRAFT_4708, partial [Coccomyxa
subellipsoidea C-169]
Length = 264
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 106/201 (52%), Gaps = 17/201 (8%)
Query: 15 DARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLA 74
DA+ ++ L + L++ FS++G V +VR++ T G A+++F+D ++ +A
Sbjct: 3 DAKALYVGNLHPYVNEAVLQDIFSTLGTVSEVRIVKDRATGNSAGSAFVKFEDHQAAAIA 62
Query: 75 MG-LNGQKLLGIPIIVQPT-QAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
+ +NG+ L + +Q Q EK T +++G+L ++ + +L
Sbjct: 63 LKTINGRILYNKEVRIQWAFQKEK-----------TENTASHSHIFVGNLSGDVADPVLL 111
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
F+ G+ + ++M D TGRSKG+GF++F + + A+KA +++G ++ ++ G
Sbjct: 112 QAFQHLGECSDARVMWDHSTGRSKGFGFVSFRTKEAAEKALAEMDGAQVGQWKIRCGWAH 171
Query: 193 DRNESVGGGPSNLDTDEMERA 213
+ E+V G LD D ++RA
Sbjct: 172 HKTEAVTG----LDIDTVDRA 188
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
IF LS + L + F +G+ D R++ + T R KG ++ F+ E+ A+ +
Sbjct: 96 IFVGNLSGDVADPVLLQAFQHLGECSDARVMWDHSTGRSKGFGFVSFRTKEAAEKALAEM 155
Query: 78 NGQKLLGIPIIV----QPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRG 133
+G ++ I T+A +T+ P T +Y+G+L + E+ LR
Sbjct: 156 DGAQVGQWKIRCGWAHHKTEAVTGLDIDTVDRADPANT----NVYVGNLPTEVMEEDLRA 211
Query: 134 IFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
F +G+I ++ GYGF+T+ A +A +NG EL G+ +K
Sbjct: 212 AFGAYGEITGLKPC------HKGGYGFVTYRDHSAAVQAIVGMNGKELKGKMVK 259
>gi|345569038|gb|EGX51907.1| hypothetical protein AOL_s00043g641 [Arthrobotrys oligospora ATCC
24927]
Length = 512
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 3 PAYSDDLSPEE---RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKG 59
PA+S E +++T+F QLS + L F V V + R++ N+ R KG
Sbjct: 236 PAFSKKAKANEDGSEESKTLFVGQLSWNVDEDWLRREFEDVATVENARVVWDNQRNRSKG 295
Query: 60 IAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR-- 116
I Y++F A+ G ++ G PI + T A +N N + R G
Sbjct: 296 IGYVDFATRADAEKALAEKQGAEIDGRPINLDFTTARQN---NNNSQDRARKFGDSESPP 352
Query: 117 ---LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
L++G+L FN E+ L G++ ++++ D DTG KG+ ++TF + D+AKKA
Sbjct: 353 SDTLFVGNLSFNADEEALGAAMSEHGEVTSVRIPTDKDTGNKKGFAYVTFSTIDEAKKAH 412
Query: 174 EQLNGFELAGRPMKVGTVTDRNES 197
+NG ++ GR ++ R+ S
Sbjct: 413 AAMNGQQVCGRSIRTDYSQPRDNS 436
>gi|74203983|dbj|BAE28998.1| unnamed protein product [Mus musculus]
Length = 564
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCMQLSQRIRTR----DLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + I + + F+ G ++ + + + T
Sbjct: 112 FGDPLSPLQSMAAQRQRALAIMCRVYAGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 171
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 172 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 229
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 230 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 275
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 276 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 305
>gi|355714554|gb|AES05042.1| poly-U binding splicing factor 60KDa [Mustela putorius furo]
Length = 314
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 35/208 (16%)
Query: 1 MRPAYSDDLSPEERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRR 56
+ P S ++ + + A I C + + + + F+ G ++ + + + T +
Sbjct: 110 LSPLQSXXMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMK 169
Query: 57 FKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRAGN 101
KG A++E++ PE+ LA+ +LG PII Q AE+ RA N
Sbjct: 170 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARAFN 227
Query: 102 TLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFI 161
R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYGFI
Sbjct: 228 --------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFI 273
Query: 162 TFHSADDAKKAQEQLNGFELAGRPMKVG 189
+ A ++ A +N F+L G+ ++VG
Sbjct: 274 EYEKAQSSQDAVSSMNLFDLGGQYLRVG 301
>gi|301773444|ref|XP_002922145.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
PUF60-like [Ailuropoda melanoleuca]
Length = 577
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 116 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 175
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 176 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 233
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 234 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 279
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 280 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 309
>gi|126323028|ref|XP_001370705.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Monodelphis
domestica]
Length = 637
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 185 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 244
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 245 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 302
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 303 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 348
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 349 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 378
>gi|169861389|ref|XP_001837329.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|116502051|gb|EAU84946.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 569
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 13/189 (6%)
Query: 16 ARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM 75
++ +F QLS + L F+S G++ + T + +G Y+ F E+ A+
Sbjct: 326 SKAVFVGQLSWNVDNDWLASEFASCGEIESATVQMDRNTGKSRGFGYVHFTTVEAAQKAL 385
Query: 76 GLNGQKLLGIPIIV------QPTQAEKNRAGNTLPNLQPRGTGGPMR-LYIGSLHFNITE 128
LNG+++ PI V P A + RA T ++ T P L++G+L FN +E
Sbjct: 386 ELNGKEIDNRPIKVDISTPRNPDAARQKRA-QTFGDV----TSPPSNTLFVGNLSFNTSE 440
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
D + +F +G + +++L D ++GR KG+G++ F + AKKA E NG +L GRP+++
Sbjct: 441 DSVWSLFNDYG-VKSVRLPTDRESGRPKGFGYVEFEDVEGAKKAFEANNGADLDGRPIRL 499
Query: 189 GTVTDRNES 197
R+ S
Sbjct: 500 DYSQPRDNS 508
>gi|71897303|ref|NP_001026551.1| poly(U)-binding-splicing factor PUF60 [Gallus gallus]
gi|60098673|emb|CAH65167.1| hypothetical protein RCJMB04_5e8 [Gallus gallus]
Length = 366
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 64 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 123
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 124 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 181
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 182 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 227
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 228 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 257
>gi|281341440|gb|EFB17024.1| hypothetical protein PANDA_011097 [Ailuropoda melanoleuca]
Length = 512
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 64 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 123
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 124 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 181
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 182 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 227
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 228 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 257
>gi|395512680|ref|XP_003760563.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Sarcophilus
harrisii]
Length = 553
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 101 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 160
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 161 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 218
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 219 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 264
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 265 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 294
>gi|444722723|gb|ELW63400.1| Poly(U)-binding-splicing factor PUF60 [Tupaia chinensis]
Length = 577
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 164 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 223
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 224 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 267
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 268 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 319
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 149 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 208
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 209 MNSVMLGGRNIKVG 222
>gi|403302944|ref|XP_003942108.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 509
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 64 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 123
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 124 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 181
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 182 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 227
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 228 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 257
>gi|327290985|ref|XP_003230202.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Anolis
carolinensis]
Length = 541
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 86 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 145
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 146 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 203
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 204 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 249
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 250 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 279
>gi|410042304|ref|XP_003951412.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 530
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 78 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 137
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 138 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 195
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 196 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 241
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 242 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 271
>gi|296480748|tpg|DAA22863.1| TPA: poly(U)-binding-splicing factor PUF60 [Bos taurus]
Length = 530
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 78 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 137
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 138 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 195
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 196 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 241
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 242 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 271
>gi|417402731|gb|JAA48201.1| Putative polypyrimidine tract-binding protein puf60 rrm superfamily
[Desmodus rotundus]
Length = 558
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 106 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 165
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 166 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 223
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 224 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 269
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 270 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 299
>gi|402794180|ref|NP_001258028.1| poly(U)-binding-splicing factor PUF60 isoform g [Homo sapiens]
gi|426360971|ref|XP_004047701.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Gorilla
gorilla gorilla]
gi|441648312|ref|XP_003280819.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1
[Nomascus leucogenys]
Length = 530
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 78 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 137
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 138 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 195
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 196 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 241
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 242 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 271
>gi|395860112|ref|XP_003802359.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1
[Otolemur garnettii]
Length = 558
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 106 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 165
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 166 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 223
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 224 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 269
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 270 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 299
>gi|332831342|ref|XP_528257.3| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Pan
troglodytes]
Length = 559
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 107 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 166
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 167 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 224
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 225 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 270
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 271 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 300
>gi|380810662|gb|AFE77206.1| poly(U)-binding-splicing factor PUF60 isoform a [Macaca mulatta]
gi|383416607|gb|AFH31517.1| poly(U)-binding-splicing factor PUF60 isoform a [Macaca mulatta]
Length = 560
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 108 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 167
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 168 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 225
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 226 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 271
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 272 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 301
>gi|197100546|ref|NP_001127017.1| poly(U)-binding-splicing factor PUF60 [Pongo abelii]
gi|75040908|sp|Q5R469.1|PUF60_PONAB RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor
gi|55733539|emb|CAH93447.1| hypothetical protein [Pongo abelii]
Length = 558
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 106 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 165
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 166 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 223
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 224 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 269
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 270 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 299
>gi|17978512|ref|NP_510965.1| poly(U)-binding-splicing factor PUF60 isoform a [Homo sapiens]
gi|397497388|ref|XP_003819493.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Pan
paniscus]
gi|402879352|ref|XP_003903307.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Papio
anubis]
gi|441648299|ref|XP_004090873.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Nomascus
leucogenys]
gi|74761960|sp|Q9UHX1.1|PUF60_HUMAN RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor; AltName:
Full=FUSE-binding protein-interacting repressor;
Short=FBP-interacting repressor; AltName:
Full=Ro-binding protein 1; Short=RoBP1; AltName:
Full=Siah-binding protein 1; Short=Siah-BP1
gi|6684440|gb|AAF23589.1|AF114818_1 Ro ribonucleoprotein-binding protein 1 [Homo sapiens]
gi|48146403|emb|CAG33424.1| SIAHBP1 [Homo sapiens]
gi|119602593|gb|EAW82187.1| fuse-binding protein-interacting repressor, isoform CRA_d [Homo
sapiens]
gi|158258178|dbj|BAF85062.1| unnamed protein product [Homo sapiens]
gi|410220384|gb|JAA07411.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
gi|410303418|gb|JAA30309.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
Length = 559
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 107 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 166
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 167 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 224
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 225 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 270
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 271 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 300
>gi|348555826|ref|XP_003463724.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
PUF60-like [Cavia porcellus]
Length = 564
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 109 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 168
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 169 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 226
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 227 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 272
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 273 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 302
>gi|257196183|ref|NP_082640.2| poly(U)-binding-splicing factor PUF60 isoform a [Mus musculus]
gi|158563798|sp|Q3UEB3.2|PUF60_MOUSE RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor
gi|158563997|sp|Q9WV25.2|PUF60_RAT RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor; AltName:
Full=RNA-binding protein Siah-BP; AltName:
Full=Siah-binding protein 1
gi|148697573|gb|EDL29520.1| RIKEN cDNA 2410104I19, isoform CRA_a [Mus musculus]
gi|149066142|gb|EDM16015.1| siah binding protein 1; FBP interacting repressor; pyrimidine tract
binding splicing factor; Ro ribonucleoprotein-binding
protein 1, isoform CRA_a [Rattus norvegicus]
Length = 564
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 112 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 171
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 172 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 229
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 230 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 275
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 276 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 305
>gi|410987958|ref|XP_004000259.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Felis catus]
Length = 502
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 50 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 109
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 110 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 167
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 168 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 213
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 214 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 243
>gi|390475872|ref|XP_002759200.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1
[Callithrix jacchus]
Length = 563
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 111 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 170
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 171 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 228
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 229 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 274
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 275 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 304
>gi|351698432|gb|EHB01351.1| Poly(U)-binding-splicing factor PUF60, partial [Heterocephalus
glaber]
Length = 556
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 104 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 163
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 164 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 221
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 222 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 267
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 268 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 297
>gi|134025329|gb|AAI35084.1| LOC562370 protein [Danio rerio]
Length = 379
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 70 FGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 129
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 130 LKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 187
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FG+I + L DP TG+ KGYG
Sbjct: 188 FN--------------RIYVASVHPDLSDDDIKSVFEAFGRIKSCSLARDPTTGKHKGYG 233
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A A+ A +N F+L G+ ++VG
Sbjct: 234 FIEYDKAQSAQDAVSSMNLFDLGGQYLRVG 263
>gi|449495396|ref|XP_002188522.2| PREDICTED: poly(U)-binding-splicing factor PUF60 [Taeniopygia
guttata]
Length = 514
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 64 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 123
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 124 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 181
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 182 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 227
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 228 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 257
>gi|114051121|ref|NP_001039598.1| poly(U)-binding-splicing factor PUF60 [Bos taurus]
gi|122144872|sp|Q2HJG2.1|PUF60_BOVIN RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor
gi|88682957|gb|AAI05448.1| Poly-U binding splicing factor 60KDa [Bos taurus]
Length = 530
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 78 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 137
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 138 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 195
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 196 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 241
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 242 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 271
>gi|297300233|ref|XP_001087975.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 6 [Macaca
mulatta]
Length = 559
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 107 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 166
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 167 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 224
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 225 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 270
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 271 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 300
>gi|402794155|ref|NP_001258027.1| poly(U)-binding-splicing factor PUF60 isoform f [Homo sapiens]
gi|119602601|gb|EAW82195.1| fuse-binding protein-interacting repressor, isoform CRA_l [Homo
sapiens]
Length = 558
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 106 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 165
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 166 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 223
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 224 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 269
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 270 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 299
>gi|410042300|ref|XP_003951410.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 516
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 64 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 123
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 124 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 181
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 182 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 227
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 228 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 257
>gi|338728499|ref|XP_003365686.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like isoform 2
[Equus caballus]
Length = 516
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 64 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 123
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 124 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 181
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 182 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 227
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 228 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 257
>gi|426235336|ref|XP_004011640.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
PUF60 [Ovis aries]
Length = 506
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 99 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 158
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 159 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 202
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 203 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 254
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 84 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 143
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 144 MNSVMLGGRNIKVG 157
>gi|326918217|ref|XP_003205387.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Meleagris
gallopavo]
Length = 516
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 64 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 123
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 124 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 181
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 182 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 227
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 228 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 257
>gi|209862867|ref|NP_001129505.1| poly(U)-binding-splicing factor PUF60 isoform c [Homo sapiens]
gi|109087696|ref|XP_001087604.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 3 [Macaca
mulatta]
gi|441648305|ref|XP_004090875.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Nomascus
leucogenys]
gi|15030041|gb|AAH11265.1| PUF60 protein [Homo sapiens]
gi|15080471|gb|AAH11979.1| PUF60 protein [Homo sapiens]
gi|119602595|gb|EAW82189.1| fuse-binding protein-interacting repressor, isoform CRA_f [Homo
sapiens]
Length = 516
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 64 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 123
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 124 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 181
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 182 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 227
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 228 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 257
>gi|440911935|gb|ELR61552.1| Poly(U)-binding-splicing factor PUF60, partial [Bos grunniens
mutus]
Length = 561
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 102 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 161
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 162 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 219
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 220 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 265
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 266 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 295
>gi|226497258|ref|NP_001140274.1| uncharacterized protein LOC100272318 [Zea mays]
gi|194698792|gb|ACF83480.1| unknown [Zea mays]
gi|414883568|tpg|DAA59582.1| TPA: ribonucleoprotein [Zea mays]
Length = 341
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 4/211 (1%)
Query: 4 AYSDDLS--PEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIA 61
AYS S P D +F L + +L + FS G+V D ++I T R +G A
Sbjct: 97 AYSSPRSRPPRGDDPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFA 156
Query: 62 YIEFKDPESVPLAMGL-NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIG 120
++ E A+ + +G L G V + + T+ R G ++Y G
Sbjct: 157 FVTMATAEEAAKAIQMFDGALLGGRTARVNYPEVPRGGERRTVTMSGRRRDDGTYKIYAG 216
Query: 121 SLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFE 180
+L + + D LR +FE + + +++ + +TGRS+G+GF++F +A+DA+ A E L+G E
Sbjct: 217 NLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALESLDGVE 276
Query: 181 LAGRPMKVGTVTDRNESVGGGPSNLDTDEME 211
L GR +++ ++ ++N G PS + E
Sbjct: 277 LEGRSLRL-SLAEQNPPPGSPPSTAQAQQEE 306
>gi|300798352|ref|NP_001178809.1| poly(U)-binding-splicing factor PUF60 [Rattus norvegicus]
Length = 563
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 111 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 170
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 171 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 228
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 229 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 274
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 275 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 304
>gi|403302946|ref|XP_003942109.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 492
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 85 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 144
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 145 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 188
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 189 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 240
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 70 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 129
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 130 MNSVMLGGRNIKVG 143
>gi|207079925|ref|NP_001128734.1| DKFZP468L0227 protein [Pongo abelii]
gi|402794126|ref|NP_001258026.1| poly(U)-binding-splicing factor PUF60 isoform e [Homo sapiens]
gi|426360969|ref|XP_004047700.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Gorilla
gorilla gorilla]
gi|441648309|ref|XP_003280820.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2
[Nomascus leucogenys]
gi|55725023|emb|CAH89379.1| hypothetical protein [Pongo abelii]
Length = 513
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 99 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 158
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 159 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 202
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 203 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 254
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 84 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 143
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 144 MNSVMLGGRNIKVG 157
>gi|6176532|gb|AAF05605.1|AF190744_1 poly-U binding splicing factor PUF60 [Homo sapiens]
Length = 556
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 104 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 163
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 164 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 221
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 222 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 267
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 268 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 297
>gi|354491098|ref|XP_003507693.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Cricetulus
griseus]
Length = 582
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 130 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 189
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 190 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 247
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 248 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 293
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 294 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 323
>gi|410042302|ref|XP_003951411.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 513
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 99 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 158
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 159 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 202
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 203 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 254
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 84 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 143
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 144 MNSVMLGGRNIKVG 157
>gi|395860114|ref|XP_003802360.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2
[Otolemur garnettii]
Length = 542
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 128 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 187
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 188 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 231
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 232 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 283
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 113 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 172
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 173 MNSVMLGGRNIKVG 186
>gi|338728501|ref|XP_001496155.3| PREDICTED: poly(U)-binding-splicing factor PUF60-like isoform 1
[Equus caballus]
Length = 499
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 85 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 144
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 145 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 188
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 189 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 240
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 70 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 129
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 130 MNSVMLGGRNIKVG 143
>gi|431908112|gb|ELK11715.1| Poly(U)-binding-splicing factor PUF60 [Pteropus alecto]
Length = 501
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 87 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 146
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 147 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 190
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 191 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 242
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 72 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 131
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 132 MNSVMLGGRNIKVG 145
>gi|73974710|ref|XP_857040.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 6 [Canis
lupus familiaris]
Length = 543
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 129 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 188
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 189 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 232
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 233 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 284
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 114 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 173
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 174 MNSVMLGGRNIKVG 187
>gi|417402525|gb|JAA48108.1| Putative polypyrimidine tract-binding protein puf60 rrm superfamily
[Desmodus rotundus]
Length = 541
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 127 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 186
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 187 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 230
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 231 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 282
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 112 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 171
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 172 MNSVMLGGRNIKVG 185
>gi|126342190|ref|XP_001379497.1| PREDICTED: polyadenylate-binding protein 1 [Monodelphis domestica]
Length = 669
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 18/271 (6%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+L + +D I+ + + + L E F+ G V+++T + R KG ++ F+
Sbjct: 216 ELGVKAKDYTNIYIKNFGENMDDQRLTEIFAKYGPTLSVKVMT-DDCGRSKGFGFVSFQS 274
Query: 68 PESVPLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR-----LYIGS 121
E A+ +NG++L G I V Q ++ R + + +R LYI +
Sbjct: 275 HEDAQAAVDDMNGKQLNGKQIYVGRAQKKRERQTELKRHFEQIKQNQHIRYQGVNLYIKN 334
Query: 122 LHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFEL 181
L I ++ LR F PFG I + ++M++ GRSKG+GF+ F S+ DA KA ++NG +
Sbjct: 335 LDDTINDEHLRKEFSPFGTITSAKVMME--NGRSKGFGFVCFSSSKDAAKASREMNGKLV 392
Query: 182 AGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPP-- 239
A +P+ V + E +L M R + + ++LA + + P
Sbjct: 393 ASKPLYVSLAQRKEERR----MHLKNQYMYRLAHLRSISNPVFNPYQLANSSPYFMTPSL 448
Query: 240 ---AAASALNLAQNAILNSSTPQVSSSTAPP 267
+ A+ N +Q A L SS +S S PP
Sbjct: 449 PSQSQAALYNASQLAQLRSSPRWISKSIRPP 479
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 9/190 (4%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
D +R +F L + I + L + FS+ G++ ++I+ KG ++ F+
Sbjct: 124 DPGQRKRGVGNVFVKNLEKSIDNKALYDTFSTFGRILSCKVISDENGS--KGYGFVHFET 181
Query: 68 PESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
ES A+ +NG L + + V ++ + R + +YI + N+
Sbjct: 182 QESAGKAIEKMNGMLLNNLKVFVGRFKSRRERESELGVKAKDY-----TNIYIKNFGENM 236
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
+ L IF +G ++++M D D GRSKG+GF++F S +DA+ A + +NG +L G+ +
Sbjct: 237 DDQRLTEIFAKYGPTLSVKVMTD-DCGRSKGFGFVSFQSHEDAQAAVDDMNGKQLNGKQI 295
Query: 187 KVGTVTDRNE 196
VG + E
Sbjct: 296 YVGRAQKKRE 305
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G LH ++TE ML F P G I +I++ D T S GY ++ F A+ +
Sbjct: 47 LYVGDLHHDVTESMLYEKFSPAGPILSIRVCRDSVTQHSLGYAYVNFQHRAHAEWVLATM 106
Query: 177 NGFELAGRPMKV 188
N + G P+++
Sbjct: 107 NLDVIKGNPIRI 118
>gi|111185612|gb|AAI19438.1| Puf60 protein [Mus musculus]
gi|152060991|gb|AAI48275.1| Puf60 protein [Mus musculus]
Length = 241
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 21 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 80
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 81 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 138
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 139 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 184
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A ++ A +N F+L G+ ++VG
Sbjct: 185 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 214
>gi|410042306|ref|XP_003951413.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 499
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 85 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 144
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 145 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 188
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 189 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 240
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 70 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 129
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 130 MNSVMLGGRNIKVG 143
>gi|402794208|ref|NP_001258029.1| poly(U)-binding-splicing factor PUF60 isoform h [Homo sapiens]
gi|109087698|ref|XP_001087484.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Macaca
mulatta]
gi|332263566|ref|XP_003280822.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 4
[Nomascus leucogenys]
gi|16307289|gb|AAH09734.1| PUF60 protein [Homo sapiens]
gi|119602596|gb|EAW82190.1| fuse-binding protein-interacting repressor, isoform CRA_g [Homo
sapiens]
gi|261859062|dbj|BAI46053.1| poly-U binding splicing factor 60KDa [synthetic construct]
Length = 499
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 85 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 144
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 145 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 188
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 189 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 240
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 70 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 129
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 130 MNSVMLGGRNIKVG 143
>gi|297300235|ref|XP_001087851.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 5 [Macaca
mulatta]
Length = 542
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 128 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 187
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 188 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 231
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 232 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 283
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 113 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 172
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 173 MNSVMLGGRNIKVG 186
>gi|402794118|ref|NP_001258025.1| poly(U)-binding-splicing factor PUF60 isoform d [Homo sapiens]
gi|119602600|gb|EAW82194.1| fuse-binding protein-interacting repressor, isoform CRA_k [Homo
sapiens]
Length = 541
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 127 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 186
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 187 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 230
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 231 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 282
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 112 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 171
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 172 MNSVMLGGRNIKVG 185
>gi|359321052|ref|XP_848710.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Canis
lupus familiaris]
Length = 560
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 146 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 205
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 206 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 249
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 250 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 301
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 131 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 190
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 191 MNSVMLGGRNIKVG 204
>gi|332831344|ref|XP_003312009.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Pan
troglodytes]
Length = 542
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 128 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 187
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 188 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 231
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 232 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 283
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 113 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 172
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 173 MNSVMLGGRNIKVG 186
>gi|380810660|gb|AFE77205.1| poly(U)-binding-splicing factor PUF60 isoform b [Macaca mulatta]
gi|383416605|gb|AFH31516.1| poly(U)-binding-splicing factor PUF60 isoform b [Macaca mulatta]
Length = 543
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 129 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 188
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 189 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 232
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 233 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 284
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 114 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 173
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 174 MNSVMLGGRNIKVG 187
>gi|148697576|gb|EDL29523.1| RIKEN cDNA 2410104I19, isoform CRA_d [Mus musculus]
Length = 553
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 139 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 198
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 199 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 242
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 243 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 294
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 124 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 183
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 184 MNSVMLGGRNIKVG 197
>gi|17298690|ref|NP_055096.2| poly(U)-binding-splicing factor PUF60 isoform b [Homo sapiens]
gi|397497390|ref|XP_003819494.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Pan
paniscus]
gi|402879354|ref|XP_003903308.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Papio
anubis]
gi|441648302|ref|XP_004090874.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Nomascus
leucogenys]
gi|17152040|gb|AAF27522.2|AF217197_1 FBP-interacting repressor [Homo sapiens]
gi|14250810|gb|AAH08875.1| Poly-U binding splicing factor 60KDa [Homo sapiens]
gi|119602594|gb|EAW82188.1| fuse-binding protein-interacting repressor, isoform CRA_e [Homo
sapiens]
gi|410220382|gb|JAA07410.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
gi|410303416|gb|JAA30308.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
Length = 542
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 128 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 187
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 188 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 231
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 232 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 283
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 113 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 172
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 173 MNSVMLGGRNIKVG 186
>gi|257196186|ref|NP_001158072.1| poly(U)-binding-splicing factor PUF60 isoform c [Mus musculus]
gi|14714891|gb|AAH10601.1| Puf60 protein [Mus musculus]
Length = 499
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 85 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 144
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 145 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 188
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 189 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 240
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 70 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 129
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 130 MNSVMLGGRNIKVG 143
>gi|76677895|ref|NP_598452.2| poly(U)-binding-splicing factor PUF60 isoform b [Mus musculus]
gi|74195824|dbj|BAE30474.1| unnamed protein product [Mus musculus]
gi|74221976|dbj|BAE40622.1| unnamed protein product [Mus musculus]
gi|148697574|gb|EDL29521.1| RIKEN cDNA 2410104I19, isoform CRA_b [Mus musculus]
gi|149066143|gb|EDM16016.1| siah binding protein 1; FBP interacting repressor; pyrimidine tract
binding splicing factor; Ro ribonucleoprotein-binding
protein 1, isoform CRA_b [Rattus norvegicus]
Length = 547
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 133 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 192
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 193 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 236
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 237 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 288
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 118 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 177
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 178 MNSVMLGGRNIKVG 191
>gi|1809248|gb|AAB41656.1| siah binding protein 1 [Homo sapiens]
Length = 541
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 127 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 186
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 187 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 230
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 231 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 282
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 112 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 171
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 172 MNSVMLGGRNIKVG 185
>gi|348541381|ref|XP_003458165.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oreochromis
niloticus]
Length = 513
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 105 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEMPEAAQLALEQMNSVVLGGRNIKVGR 164
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 165 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHPDLSDDDIKSVFEA 208
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L +P TGR KGYGFI + A A+ A +N F+L G+ ++VG
Sbjct: 209 FGKIKSCMLAREPTTGRHKGYGFIEYEKAQSAQDAVASMNLFDLGGQYLRVG 260
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 90 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEMPEAAQLALEQ 149
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 150 MNSVVLGGRNIKVG 163
>gi|148697575|gb|EDL29522.1| RIKEN cDNA 2410104I19, isoform CRA_c [Mus musculus]
Length = 546
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 132 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 191
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 192 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 235
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 236 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 287
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 117 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 176
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 177 MNSVMLGGRNIKVG 190
>gi|242047468|ref|XP_002461480.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
gi|241924857|gb|EER98001.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
Length = 338
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 1/171 (0%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGL- 77
+F L + +L + F+ G+V D ++I T R +G A++ E A+ +
Sbjct: 112 LFVGNLPYTYTSEELAQVFAEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKAIQMF 171
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
+G L G V + + T+ R G ++Y G+L + + D LR +FE
Sbjct: 172 DGALLGGRTARVNYPEVPRGGERRTVTMAGRRRDDGTYKIYAGNLGWGVRADTLRNVFEG 231
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+ + +++ + +TGRS+G+GF++F +A+DA+ A E L+G EL GRP+++
Sbjct: 232 RAGLLDARVIFERETGRSRGFGFVSFRTAEDAQAALEALDGVELEGRPLRL 282
>gi|403213707|emb|CCK68209.1| hypothetical protein KNAG_0A05440 [Kazachstania naganishii CBS
8797]
Length = 442
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 97/193 (50%), Gaps = 13/193 (6%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E R ++ L + I L+++F G++ DV+++ +K + A++E+
Sbjct: 75 ETSDRVLYVGNLDKSITEDILKQYFQVAGQIVDVKVM-IDKKSNYVNYAFVEYAKAHDAS 133
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
+A+ Q L GI I + + + NRA + Q L++G L+ +I +D L
Sbjct: 134 VAL----QTLNGIQI--ENNKVKINRA---FQSQQSTTDDSTFNLFVGDLNIDIDDDTLS 184
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
F+ F +M D TGRS+GYGF++F + A+KA E++ G EL GRP+++ T
Sbjct: 185 RSFKDFPSYIQAHVMWDMQTGRSRGYGFVSFADQEQAQKAMEEMQGKELNGRPIRINWAT 244
Query: 193 DRN---ESVGGGP 202
R+ + GGP
Sbjct: 245 KRDNNQQQNHGGP 257
>gi|397610803|gb|EJK61025.1| hypothetical protein THAOC_18547 [Thalassiosira oceanica]
Length = 178
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 89/181 (49%), Gaps = 25/181 (13%)
Query: 27 RIRTRDLEEFFSS-VG-KVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQ--KL 82
R RD+ +F VG VRDV+L+ +T R +G AY+E V LA+ G
Sbjct: 2 RADERDVRHYFRRRVGVSVRDVQLLRDKRTGRHRGCAYVELGSLTDVTLALASTGTVPDF 61
Query: 83 LGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM-----------------RLYIGSLHFN 125
PI+V+ ++AEKN A P G GG M ++Y+GS+
Sbjct: 62 QRFPILVKHSEAEKNAA----PGSTALGIGGDMTAASSSSGTGPGGSEAQKVYVGSIDAA 117
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
+T+ L +F FG + + L +DP TG+S+G+ F+++ A DA A + G +AGR
Sbjct: 118 VTQAQLYALFSAFGPLQKVLLQMDPLTGQSRGFAFLSYRDARDANLAIRTMGGQVVAGRQ 177
Query: 186 M 186
+
Sbjct: 178 L 178
>gi|224112839|ref|XP_002316306.1| predicted protein [Populus trichocarpa]
gi|222865346|gb|EEF02477.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 5/157 (3%)
Query: 32 DLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQP 91
D+ FF G + +V +T + +F+GIA I FK + A+ L+G + G + +QP
Sbjct: 210 DIRSFFEGCGTITEVDCMTFPDSGKFRGIAIISFKTEAAAKRALDLDGSDMGGFYLKIQP 269
Query: 92 TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPD 151
+ K N PN P G R+Y+G+L ++ITED L+ F KI +I+ +D +
Sbjct: 270 YKTTKV---NKEPNFAPGIVEGYNRIYVGNLSWDITEDDLKKFFSDC-KISSIRFGMDKE 325
Query: 152 TGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
TG +GYG + F D KA +L+ + GRP+K+
Sbjct: 326 TGEFRGYGHVDFSDNDSLVKAL-KLDQRIVCGRPIKI 361
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+G + + TED +R FE G I + M PD+G+ +G I+F + AK+A +
Sbjct: 196 RVYVGGIPYYSTEDDIRSFFEGCGTITEVDCMTFPDSGKFRGIAIISFKTEAAAKRALD- 254
Query: 176 LNGFELAGRPMKV 188
L+G ++ G +K+
Sbjct: 255 LDGSDMGGFYLKI 267
>gi|344236628|gb|EGV92731.1| Poly(U)-binding-splicing factor PUF60 [Cricetulus griseus]
Length = 271
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 85 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 144
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 145 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 188
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 189 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 240
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 70 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 129
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 130 MNSVMLGGRNIKVG 143
>gi|157743332|ref|NP_001099058.1| poly(U)-binding-splicing factor PUF60 [Danio rerio]
gi|157423233|gb|AAI53302.1| LOC562370 protein [Danio rerio]
Length = 518
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 70 FGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 129
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 130 LKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 187
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FG+I + L DP TG+ KGYG
Sbjct: 188 FN--------------RIYVASVHPDLSDDDIKSVFEAFGRIKSCSLARDPTTGKHKGYG 233
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A A+ A +N F+L G+ ++VG
Sbjct: 234 FIEYDKAQSAQDAVSSMNLFDLGGQYLRVG 263
>gi|355780002|gb|EHH64478.1| 60 kDa poly(U)-binding-splicing factor [Macaca fascicularis]
Length = 521
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 128 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 187
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 188 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 231
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 232 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 283
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 113 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 172
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 173 MNSVMLGGRNIKVG 186
>gi|355698276|gb|EHH28824.1| 60 kDa poly(U)-binding-splicing factor [Macaca mulatta]
Length = 568
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 154 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 213
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 214 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 257
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 258 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 309
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 139 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 198
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 199 MNSVMLGGRNIKVG 212
>gi|5524727|gb|AAD44358.1|AF165892_1 RNA-binding protein SiahBP [Rattus norvegicus]
Length = 565
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 151 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 210
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 211 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 254
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 255 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 306
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 136 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 195
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 196 MNSVMLGGRNIKVG 209
>gi|119195917|ref|XP_001248562.1| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
gi|392862234|gb|EAS37139.2| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
Length = 496
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Query: 15 DARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLA 74
++ +F LS + L F S G++ VR++T + R +G Y+EF + E A
Sbjct: 260 ESSNLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDASKA 319
Query: 75 MG------LNGQKL-LGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
++G+ + L Q ++RA + + + + L+IG++ FN
Sbjct: 320 FKAKKDAEIDGRTINLDFANARQNAGGARDRAQSRAKSFGDQTSPESDTLFIGNISFNAD 379
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E+ ++ F G I I+L DP++GR KG+G++ F S D+A+ A L G ELAGR M+
Sbjct: 380 ENAVQETFSSHGSILGIRLPTDPESGRPKGFGYVQFSSVDEARSAFNALQGTELAGRAMR 439
Query: 188 VGTVTDRNES 197
+ T R S
Sbjct: 440 LDFSTPRQNS 449
>gi|303321732|ref|XP_003070860.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110557|gb|EER28715.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040347|gb|EFW22280.1| hypothetical protein CPSG_00179 [Coccidioides posadasii str.
Silveira]
Length = 498
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Query: 15 DARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLA 74
++ +F LS + L F S G++ VR++T + R +G Y+EF + E A
Sbjct: 262 ESSNLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDASKA 321
Query: 75 MG------LNGQKL-LGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
++G+ + L Q ++RA + + + + L+IG++ FN
Sbjct: 322 FKAKKDAEIDGRTINLDFANARQNAGGARDRAQSRAKSFGDQTSPESDTLFIGNISFNAD 381
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E+ ++ F G I I+L DP++GR KG+G++ F S D+A+ A L G ELAGR M+
Sbjct: 382 ENAVQETFSSHGSILGIRLPTDPESGRPKGFGYVQFSSVDEARSAFNALQGTELAGRAMR 441
Query: 188 VGTVTDRNES 197
+ T R S
Sbjct: 442 LDFSTPRQNS 451
>gi|226499830|ref|NP_001140942.1| uncharacterized protein LOC100273020 [Zea mays]
gi|194701856|gb|ACF85012.1| unknown [Zea mays]
Length = 473
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 8/184 (4%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLN 78
+F LS + L F S G++ VR++T +T R +G Y+E+ D S A
Sbjct: 227 LFVGNLSWNVDEEWLRREFESFGELSGVRIMTERETGRSRGFGYVEYADASSAKAAYEAK 286
Query: 79 GQKLLGIPII----VQP----TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
L I +P +QA + +A + + + L++G+L F + E+
Sbjct: 287 KDTELDGRTINLDYAKPRDANSQAPREKAQTRARSFGDQTSPESNTLFVGNLVFGVDENA 346
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
+R +FE G+I ++L D +TGR KGYG++ F S D+A++A +L G ++ GR +++
Sbjct: 347 VREVFEGQGQIQGVRLPTDAETGRPKGYGYVEFSSVDEARQALNELQGTDIGGRAIRLDF 406
Query: 191 VTDR 194
T R
Sbjct: 407 STPR 410
>gi|326476993|gb|EGE01003.1| nucleolin protein Nsr1 [Trichophyton equinum CBS 127.97]
Length = 479
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 16/182 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-- 76
+F LS + L F G++ R++T ++ R +G Y+EF + E A G
Sbjct: 240 LFVGNLSWNVDEEWLRSEFEEFGELSGTRIVTDRESGRSRGFGYVEFVNVEDAVKAHGAK 299
Query: 77 ----LNGQKL------LGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
L+G+K+ P + NRA + P L+IG++ F+
Sbjct: 300 KDAELDGRKMNLDYANARANGNANPRERADNRAKSFGDQTSPESD----TLFIGNISFSA 355
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
E+M++ +F +G I I+L DPD+GR KG+G++ F S D+A+ A E NG +L GR +
Sbjct: 356 DENMVQELFSKYGTIQGIRLPTDPDSGRPKGFGYVQFSSVDEARAALEAENGADLGGRSI 415
Query: 187 KV 188
++
Sbjct: 416 RL 417
>gi|400602999|gb|EJP70597.1| cutinase negative acting protein [Beauveria bassiana ARSEF 2860]
Length = 448
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 7/168 (4%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-G 76
T+F LS + L E F S G + R++T T R +G Y++F D ES A
Sbjct: 204 TLFAGSLSWGVDDNALYEAFKSFGNIVSARVVTDKNTGRSRGFGYVDFGDSESATKAYEA 263
Query: 77 LNGQKLLGIPIIV-----QPTQAE-KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+ GQ++ G + + +PT+ + ++RA + + L++G+L F+ +D
Sbjct: 264 MQGQEIDGRALNLDYANAKPTEGKPQDRAADRAKRHGDTLSAESDTLFVGNLPFDTEQDT 323
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
+R F ++ +++L DPD+G KG+G++TF+S +DAK A + NG
Sbjct: 324 VRQFFSEVAEVASVRLPTDPDSGNLKGFGYVTFNSIEDAKSALDAKNG 371
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
PM L+ GSL + + ++ L F+ FG I + +++ D +TGRS+G+G++ F ++ A KA
Sbjct: 202 PMTLFAGSLSWGVDDNALYEAFKSFGNIVSARVVTDKNTGRSRGFGYVDFGDSESATKAY 261
Query: 174 EQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGA 219
E + G E+ GR + + + G P + D +R G L A
Sbjct: 262 EAMQGQEIDGRALNLDYANAK--PTEGKPQDRAADRAKRHGDTLSA 305
>gi|303324711|pdb|2KXF|A Chain A, Solution Structure Of The First Two Rrm Domains Of
Fbp-Interacting Repressor (Fir)
gi|303324712|pdb|2KXH|A Chain A, Solution Structure Of The First Two Rrm Domains Of Fir In
The Complex With Fbp Nbox Peptide
Length = 199
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 30 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 89
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 90 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 133
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 134 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 185
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 15 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 74
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 75 MNSVMLGGRNIKVG 88
>gi|254585491|ref|XP_002498313.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
gi|238941207|emb|CAR29380.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
Length = 468
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
TIF +LS I + L+ F +G V+ R+I + R +G Y++F D A+
Sbjct: 237 TIFVGRLSWNIDDQWLKNEFEHIGGVQSARVIYERGSTRSRGYGYVDFTDKSYAEKAVKE 296
Query: 77 LNGQKLLGIPI---------IVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
++G++L G PI V P + R G+ +P+ +P T L++G+L FN
Sbjct: 297 MHGKELDGRPINCDMSTSKPTVNPREDRAKRFGD-MPS-EPSDT-----LFLGNLSFNAD 349
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
D + +F P G++ ++++ P+T + KG+G++ + S D A+KA E L G + RP++
Sbjct: 350 RDQIYELFSPHGEVISVRIPTHPETEQPKGFGYVQYASVDSAQKALETLQGEYIDNRPVR 409
Query: 188 VGTVTDRNESVGG 200
+ T + + GG
Sbjct: 410 LDFSTPKTGNGGG 422
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 50/84 (59%)
Query: 111 TGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAK 170
+G P +++G L +NI + L+ FE G + + +++ + + RS+GYG++ F A+
Sbjct: 232 SGEPATIFVGRLSWNIDDQWLKNEFEHIGGVQSARVIYERGSTRSRGYGYVDFTDKSYAE 291
Query: 171 KAQEQLNGFELAGRPMKVGTVTDR 194
KA ++++G EL GRP+ T +
Sbjct: 292 KAVKEMHGKELDGRPINCDMSTSK 315
>gi|440797518|gb|ELR18604.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 696
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 57/74 (77%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+H+++T D ++ +FE FG + + LM +P+TG+ KGYGF+ + + A++A +Q
Sbjct: 412 RIYVGSIHWDLTSDDIKTVFEAFGTVKSCVLMPNPETGKHKGYGFVEYEESKSAEEAIQQ 471
Query: 176 LNGFELAGRPMKVG 189
+NG++L GRP+KVG
Sbjct: 472 MNGWDLGGRPIKVG 485
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 50/74 (67%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GSL+F ++E+ ++ F PFG + ++ L DP T RSKG+ F+ + D A A +
Sbjct: 252 RIYVGSLNFELSEEDIKTAFSPFGPVKSVSLTKDPLTQRSKGFAFVEYAYPDAATAALKH 311
Query: 176 LNGFELAGRPMKVG 189
+NGF LAGR +KVG
Sbjct: 312 MNGFMLAGRQLKVG 325
>gi|224069480|ref|XP_002326357.1| predicted protein [Populus trichocarpa]
gi|222833550|gb|EEE72027.1| predicted protein [Populus trichocarpa]
Length = 286
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 25/201 (12%)
Query: 3 PAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY 62
P++S DL +F L + + L + F S G V V + T R +G +
Sbjct: 85 PSFSPDL--------QLFVGNLPFNVNSAQLADLFKSAGNVEMVEVKYDKVTGRSRGFGF 136
Query: 63 IEFKDPESVPLA-MGLNGQKLLGIPIIVQ---PTQAEKNRAGNTLPNLQPRGTGGP---- 114
+ E V A NG +L G P+ V P Q E + + LP + + GP
Sbjct: 137 VTMSTIEEVEAASQQFNGYELDGRPLRVNSGPPPQRETSFS--RLPQRENSFSRGPGARG 194
Query: 115 -------MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSAD 167
R+Y+G+L +N+ + L +F GK+ + +++ D D+GRSKG+GF+T+ SA+
Sbjct: 195 GETFDSSNRVYVGNLSWNVDDSALESLFREKGKVMDAKVVYDRDSGRSKGFGFVTYSSAE 254
Query: 168 DAKKAQEQLNGFELAGRPMKV 188
+ + A + LNG EL GR ++V
Sbjct: 255 EVEDAVDSLNGAELDGRAIRV 275
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 69/129 (53%), Gaps = 9/129 (6%)
Query: 62 YIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGS 121
++ F+ + PL+ L + I + Q E P+ P ++L++G+
Sbjct: 47 FLSFQQKQQQPLSSRF----LKSVAISSEFGQEEDVFGDGDEPSFSP-----DLQLFVGN 97
Query: 122 LHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFEL 181
L FN+ L +F+ G ++ +++ D TGRS+G+GF+T + ++ + A +Q NG+EL
Sbjct: 98 LPFNVNSAQLADLFKSAGNVEMVEVKYDKVTGRSRGFGFVTMSTIEEVEAASQQFNGYEL 157
Query: 182 AGRPMKVGT 190
GRP++V +
Sbjct: 158 DGRPLRVNS 166
>gi|335310331|ref|XP_003361983.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Sus scrofa]
Length = 362
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 29 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 88
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 89 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 132
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 133 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 184
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 14 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 73
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 74 MNSVMLGGRNIKVG 87
>gi|169404577|pdb|2QFJ|A Chain A, Crystal Structure Of First Two Rrm Domains Of Fir Bound To
Ssdna From A Portion Of Fuse
gi|169404578|pdb|2QFJ|B Chain B, Crystal Structure Of First Two Rrm Domains Of Fir Bound To
Ssdna From A Portion Of Fuse
Length = 216
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 45 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 104
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 105 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEA 148
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + A ++ A +N F+L G+ ++VG
Sbjct: 149 FGKIKSATLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG 200
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 30 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 89
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 90 MNSVMLGGRNIKVG 103
>gi|428182175|gb|EKX51036.1| hypothetical protein GUITHDRAFT_134574 [Guillardia theta CCMP2712]
Length = 458
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 51/221 (23%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF-KD 67
+ P +R+ ++ L ++ D+ F G ++ + + T + KG A+IE+ D
Sbjct: 92 VKPPQRN--RLYVGSLHFDLKEADVRAIFQPFGPIKTIEMSYEPTTGKSKGYAFIEYMND 149
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLP------------------NLQPR 109
++ ++G + G PI V R NT+ +LQP
Sbjct: 150 AQADACEKAMDGFMIAGRPIKV-------GRPHNTVSANAPVHRRLFFLLNFSSVDLQPW 202
Query: 110 G-----------------------TGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQL 146
G P R+YIGS+ F++ E ++ IF+ FG I I +
Sbjct: 203 PPSLPQQAALAAQKAQAQPLNTPVAGPPARIYIGSVLFDVKESEVKQIFQVFGSIKQISM 262
Query: 147 MVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
+ +P+ G+ KGYGFI + DDA +A + +NGF+LAGRP+K
Sbjct: 263 IPNPENGKHKGYGFIEYEKHDDAVQAIQAMNGFQLAGRPLK 303
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 53/74 (71%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
RLY+GSLHF++ E +R IF+PFG I I++ +P TG+SKGY FI + + A ++
Sbjct: 99 RLYVGSLHFDLKEADVRAIFQPFGPIKTIEMSYEPTTGKSKGYAFIEYMNDAQADACEKA 158
Query: 176 LNGFELAGRPMKVG 189
++GF +AGRP+KVG
Sbjct: 159 MDGFMIAGRPIKVG 172
>gi|431899704|gb|ELK07658.1| Polyadenylate-binding protein 4-like protein [Pteropus alecto]
Length = 370
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 127/280 (45%), Gaps = 39/280 (13%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-G 76
+F L + I + L E FS+ GK+ ++++ + R G A++ F+ + A+
Sbjct: 99 NVFIKNLHKSIDNKTLYEHFSAFGKILSSKVMSDDAGSR--GYAFVHFQSQTAADRAIEA 156
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
+NG L G + V P + K+R L N T +YI + ++ ++ L+ IF
Sbjct: 157 MNGALLKGCRLFVGPFKNRKDRQAE-LQNKANEFTN----VYIKNFGDDMDDERLKEIFS 211
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
FGKI ++++M D GRSKG+GF++F S + A++A E +NG +L+G+P+ VG + E
Sbjct: 212 HFGKILSVKVMTDS-RGRSKGFGFVSFDSHEAAQRAVEIMNGKDLSGQPLFVGRAQKKAE 270
Query: 197 S-------------------------VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAE 231
+ ++D + + R G+ R+++M +
Sbjct: 271 RQAELKLMFEQMKQERYRRFRGVKLYIKNLDDSIDDERLRREFSSFGSISRVKVMKEEGR 330
Query: 232 GTGLEL-----PPAAASALNLAQNAILNSSTPQVSSSTAP 266
G L P A A+ IL S + ++ + P
Sbjct: 331 SKGFGLICFSSPEEATKAMVEMNGRILGSKSLNIALAQRP 370
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 37 FSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQPTQAE 95
FS+VG V +R+ T+R G AY+ F A+ +N + G I + +Q +
Sbjct: 30 FSAVGPVLSIRICRDLVTQRSLGYAYVNFLHLADAQKALDTMNFDMIKGKSIRLMWSQRD 89
Query: 96 KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS 155
L+ G G ++I +LH +I L F FGKI + ++M D D G S
Sbjct: 90 --------AYLRKSGIGN---VFIKNLHKSIDNKTLYEHFSAFGKILSSKVMSD-DAG-S 136
Query: 156 KGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
+GY F+ F S A +A E +NG L G + VG +R +
Sbjct: 137 RGYAFVHFQSQTAADRAIEAMNGALLKGCRLFVGPFKNRKD 177
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G LH +TED+L F G + +I++ D T RS GY ++ F DA+KA + +
Sbjct: 12 LYVGDLHAEVTEDLLFKKFSAVGPVLSIRICRDLVTQRSLGYAYVNFLHLADAQKALDTM 71
Query: 177 NGFELAGRPMKV 188
N + G+ +++
Sbjct: 72 NFDMIKGKSIRL 83
>gi|330793087|ref|XP_003284617.1| hypothetical protein DICPUDRAFT_148416 [Dictyostelium purpureum]
gi|325085416|gb|EGC38823.1| hypothetical protein DICPUDRAFT_148416 [Dictyostelium purpureum]
Length = 829
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 70/117 (59%), Gaps = 7/117 (5%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFH---SADDAKKA 172
R+YIGS+++N+TE+ +RGIF FGKI + LM + +TG+ KGYGFI F SADDA
Sbjct: 623 RIYIGSINWNVTEEQIRGIFSQFGKIISCFLMQNTETGKHKGYGFIDFENKKSADDALA- 681
Query: 173 QEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKL 229
+NGFEL GR MKVG T + ++D +E + + R+QL KL
Sbjct: 682 ---MNGFELLGRAMKVGRPTKGASANTISNGSIDKTSLEGEAMLTTSDQRIQLTQKL 735
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+YIG+LHF++ ED + F FG + +I L D + G+SKGY FI + S D A KA E
Sbjct: 464 RVYIGNLHFSLAEDAIIQAFSQFGTVKSILLGKDAN-GKSKGYAFIEYESPDSATKAIES 522
Query: 176 LNGFELAGRPMKV 188
++ + +AGR +KV
Sbjct: 523 MSNYVMAGRVIKV 535
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 81/202 (40%), Gaps = 36/202 (17%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
++ ++P +A I+ ++ + + FS GK+ L+ +T + KG +I+F
Sbjct: 611 AETIAPAVNEANRIYIGSINWNVTEEQIRGIFSQFGKIISCFLMQNTETGKHKGYGFIDF 670
Query: 66 KDPESVPLAMGLNGQKLLGIPIIV-QPTQAEKNRAGNTLPN--LQPRGTGGPMRLYIGSL 122
++ +S A+ +NG +LLG + V +PT K + NT+ N + G L
Sbjct: 671 ENKKSADDALAMNGFELLGRAMKVGRPT---KGASANTISNGSIDKTSLEGEAMLTTSDQ 727
Query: 123 HFNITEDML--------------------------RGIFEPFGKIDNIQLMVDPDTGRSK 156
+T+ +L R FG+I+ + + D T R
Sbjct: 728 RIQLTQKLLGNENKCLVLRNAGSPDDIDPSFEEDIRSGCNEFGEIEKLVIKTDSSTVRV- 786
Query: 157 GYGFITFHSADDAKKAQEQLNG 178
+I F A Q +LNG
Sbjct: 787 ---YIVFKEAPSCVACQSKLNG 805
>gi|115470657|ref|NP_001058927.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|34394882|dbj|BAC84331.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113610463|dbj|BAF20841.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|125557292|gb|EAZ02828.1| hypothetical protein OsI_24955 [Oryza sativa Indica Group]
gi|215695203|dbj|BAG90394.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740788|dbj|BAG96944.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 348
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLN 78
+F L + + ++ + FS G+V +V++I T R +G A++ E A+ +
Sbjct: 120 LFVGNLPYTMTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVTMATAEEAATAIQMF 179
Query: 79 GQKLLG-------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDML 131
LLG P + + + A T N + GT ++Y G+L + + D L
Sbjct: 180 NGALLGGRTARVNYPEVPRGGERAVGSAAATRENRRDDGT---FKIYAGNLGWGVRADAL 236
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTV 191
R FE + + +++ + D+GRS+G+GF++F +A+DA+ A E L+G EL GRP+++ ++
Sbjct: 237 RAAFEGQPGLLDARVIFERDSGRSRGFGFVSFRTAEDAQAALEALDGVELEGRPLRL-SM 295
Query: 192 TDRNESVGGGPSNLDTDEMERA 213
++N + G PS + + E E A
Sbjct: 296 AEQNPTA-GSPSTVQSQEEETA 316
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%)
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
P RL++G+L + +T + F G++DN+Q++ D T RS+G+ F+T +A++A A
Sbjct: 117 PGRLFVGNLPYTMTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVTMATAEEAATAI 176
Query: 174 EQLNGFELAGRPMKV 188
+ NG L GR +V
Sbjct: 177 QMFNGALLGGRTARV 191
>gi|384499302|gb|EIE89793.1| hypothetical protein RO3G_14504 [Rhizopus delemar RA 99-880]
Length = 292
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 88/172 (51%), Gaps = 7/172 (4%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGL 77
T+F QL+ ++ F G V DVRL + +G A+I+F E AM L
Sbjct: 82 TVFVGQLNFDATAEEIRTHFGQCGPVSDVRLRMHPNGVKSRGFAHIDFTSAEGKQAAMAL 141
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
+G + +G I V Q + R+ +T N P+ ++++ +L ++ ED L+ FE
Sbjct: 142 DGTEFMGRTIRVDDAQPAQGRSTDT--NYGPK----TDKVFVANLSYDTDEDSLKQAFEK 195
Query: 138 FGKI-DNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
FG I I L + DTGR +G +I F + D+A+ A + +NG L GRP++
Sbjct: 196 FGTIVGEIGLPISRDTGRIRGIAYIQFETEDEAEAAVKGMNGVYLDGRPIRT 247
>gi|41054740|ref|NP_957426.1| nucleolysin TIAR [Danio rerio]
gi|33416339|gb|AAH55501.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Danio
rerio]
Length = 370
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 97/184 (52%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRR-FKGIAYIEFKDPES 70
+E +T++ LS+ + + + F+ +G + ++IT + + + + + E +D +
Sbjct: 3 DESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAAA 62
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
AM NG+K+LG + V N A T P+ Q + T +++G L IT D
Sbjct: 63 ALAAM--NGRKILGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTDD 111
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
+R F PFGKI + +++ D TG+SKGYGF++F++ DA+ A + G L GR ++
Sbjct: 112 IRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNW 171
Query: 191 VTDR 194
T +
Sbjct: 172 ATRK 175
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 28/185 (15%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F LS I T D+ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 98 VFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHM 157
Query: 76 GLNGQKLLG-------------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSL 122
G GQ L G P VQ A++ R + P+ +Y G +
Sbjct: 158 G--GQWLGGRQIRTNWATRKPPAPKSVQDNSAKQLRFDEVVNQSSPQNC----TVYCGGI 211
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
+TE ++R F PFG+I +++ V P+ KGY FI F S + A A +NG +
Sbjct: 212 QSGLTEHLMRQTFSPFGQI--MEIRVFPE----KGYSFIRFSSHESAAHAIVSVNGTTIE 265
Query: 183 GRPMK 187
G +K
Sbjct: 266 GHVVK 270
>gi|308321266|gb|ADO27785.1| nucleolysin tiar [Ictalurus furcatus]
Length = 374
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 97/184 (52%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRR-FKGIAYIEFKDPES 70
+E +T++ LS+ + + + F+ +G + ++IT + + + + + E +D +
Sbjct: 3 DESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAA 62
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
AM NG+K+LG + V N A T P+ Q + T +++G L IT D
Sbjct: 63 ALAAM--NGRKILGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTDD 111
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
+R F PFGKI + +++ D TG+SKGYGF++F++ DA+ A + G L GR ++
Sbjct: 112 IRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNW 171
Query: 191 VTDR 194
T +
Sbjct: 172 ATRK 175
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 28/185 (15%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F LS I T D+ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 98 VFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHM 157
Query: 76 GLNGQKLLG-------------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSL 122
G GQ L G P Q ++ R + + P+ +Y G +
Sbjct: 158 G--GQWLGGRQIRTNWATRKPPAPKNTQDASPKQLRYEDVVNQSSPQNC----TVYCGGI 211
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
+++ ++R F PFG+I +++ V P+ KGY FI F S + A A +NG +
Sbjct: 212 QSGLSDHLMRQTFSPFGQI--MEIRVFPE----KGYSFIRFSSHESAAHAIVSVNGTTIE 265
Query: 183 GRPMK 187
G +K
Sbjct: 266 GHIVK 270
>gi|123485827|ref|XP_001324580.1| spliceosomal protein [Trichomonas vaginalis G3]
gi|121907465|gb|EAY12357.1| spliceosomal protein, putative [Trichomonas vaginalis G3]
Length = 221
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
T+F +S+ + L E F VG V V + T R G A++EF+ + A+
Sbjct: 13 TLFLCDISEHVTEEILTELFMQVGPVVFVNIPRDRITNRMNGYAFVEFRTEQDCMYALSV 72
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
+ G KL G+P+ + + N+ P+ G +LYIG+L ++ + L F
Sbjct: 73 MQGVKLFGVPLKL---------SANSTPSTGDELDVGA-KLYIGNLSQDVNDGNLLQTFR 122
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
FG + + +++VDP TG+S G+GF+ + S D A KA++ +NG G+P+ V
Sbjct: 123 QFGNVLHARVVVDPATGKSLGHGFVAYDSFDAADKAKKAMNGEYFGGQPITV 174
>gi|432884715|ref|XP_004074554.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
++ +T++ LS+ + + E F +G + ++I T ++EF +
Sbjct: 2 DDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIV--DTAGHDPYCFVEFYEHRHA 59
Query: 72 PLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+ +NG+K+LG + V N A T P Q + T +++G L IT D
Sbjct: 60 TATIAAMNGRKILGKEVKV-------NWA--TTPTSQKKDTSSHFHVFVGDLSPEITTDD 110
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFGKI + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++
Sbjct: 111 IKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 170
Query: 191 VTDR 194
T +
Sbjct: 171 ATRK 174
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F+ GK+ D R++ T + KG ++ F D E+ M
Sbjct: 97 VFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P N + ++ + + + +Y G + +TE
Sbjct: 157 GGQWLGGRQIRTNWATRKPAPKTTNESSSSKQLSFDEVVNQSSPSNCTVYCGGVTTGLTE 216
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I +++ V P+ KGY F+ F+S + A A +NG + G +K
Sbjct: 217 QIMRQTFSPFGQI--MEIRVFPE----KGYSFVRFNSHEAAAHAIVSVNGTSIEGYVVK 269
>gi|348542282|ref|XP_003458614.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oreochromis
niloticus]
Length = 386
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 17/189 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
DD P +T++ LS+ + + E F +G + ++I T ++EF
Sbjct: 2 DDDQP-----KTLYVGNLSRDVTEALILELFGQIGPCKSCKMIV--DTAGHDPYCFVEFY 54
Query: 67 DPESVPLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
+ + +NG+K+LG + V N A T P Q + T +++G L
Sbjct: 55 EHRHATATIAAMNGRKILGKEVKV-------NWA--TTPTSQKKDTSSHFHVFVGDLSPE 105
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
IT D ++ F PFGKI + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR
Sbjct: 106 ITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 165
Query: 186 MKVGTVTDR 194
++ T +
Sbjct: 166 IRTNWATRK 174
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F+ GK+ D R++ T + KG ++ F D E+ M
Sbjct: 97 VFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + NT + + + +Y G + +TE
Sbjct: 157 GGQWLGGRQIRTNWATRKPAPKTTSETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTE 216
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I +++ V P+ KGY F+ F+S + A A +NG + G +K
Sbjct: 217 QIMRQTFSPFGQI--MEIRVFPE----KGYSFVRFNSHEAAAHAIVSVNGTSIEGYVVK 269
>gi|50286801|ref|XP_445830.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525136|emb|CAG58749.1| unnamed protein product [Candida glabrata]
Length = 425
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 99/185 (53%), Gaps = 17/185 (9%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
T+F +LS I L++ F +G V R++ T R +G Y++F+D A+
Sbjct: 177 TVFVGRLSWSIDDEWLKQEFEHIGGVVAARVMYERGTDRSRGYGYVDFEDKSYAEKAVKE 236
Query: 77 LNGQKLLGIPI---------IVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
++G+++ G PI V P + + R G+ +P+ +P T L++G+L FN
Sbjct: 237 MHGKEIDGRPINVDMSTSKPTVNPREDRQKRFGD-IPS-EPSDT-----LFLGNLSFNAD 289
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
D + IF FG+I ++++ P+T + KG+G++ + S DDAKKA E L G + RP++
Sbjct: 290 RDNIYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTSIDDAKKALEALQGEYIDNRPVR 349
Query: 188 VGTVT 192
+ T
Sbjct: 350 LDYST 354
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 112 GGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKK 171
G P +++G L ++I ++ L+ FE G + ++M + T RS+GYG++ F A+K
Sbjct: 173 GEPATVFVGRLSWSIDDEWLKQEFEHIGGVVAARVMYERGTDRSRGYGYVDFEDKSYAEK 232
Query: 172 AQEQLNGFELAGRPMKVGTVT---------DRNESVGGGPS 203
A ++++G E+ GRP+ V T DR + G PS
Sbjct: 233 AVKEMHGKEIDGRPINVDMSTSKPTVNPREDRQKRFGDIPS 273
>gi|238601653|ref|XP_002395467.1| hypothetical protein MPER_04477 [Moniliophthora perniciosa FA553]
gi|215466258|gb|EEB96397.1| hypothetical protein MPER_04477 [Moniliophthora perniciosa FA553]
Length = 180
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 78/155 (50%), Gaps = 33/155 (21%)
Query: 152 TGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEME 211
TGRSKGY F+ + A+ AK A EQ+ GFELAGR ++V T ++S GG
Sbjct: 2 TGRSKGYAFVQYKRAEHAKMALEQMEGFELAGRTLRVNTQDSLDDSGGG----------- 50
Query: 212 RAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVSSSTAPPIATQ 271
+L A R LM KLA +E PP ++ + TP + + + ++
Sbjct: 51 ----NLNAASRQALMQKLAR---IEPPP-----------SLPDPVTPNIPTQV---MQSR 89
Query: 272 CFLLANMFDPATETNPTWDVEIRDDVIEEC-NKHG 305
L+ NMFDP ET WD E+ DDV EC K+G
Sbjct: 90 SVLMKNMFDPGEETERDWDKELADDVKGECGEKYG 124
>gi|410900504|ref|XP_003963736.1| PREDICTED: nucleolysin TIAR-like isoform 1 [Takifugu rubripes]
Length = 386
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 98/184 (53%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRR-FKGIAYIEFKDPES 70
EE ++T++ LS+ + + + FS +G + ++IT + + + + +++ KD S
Sbjct: 5 EESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSSDPYCFVEFVDHKDAAS 64
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
M N +K+LG + V N A T P+ Q + T +++G L +IT +
Sbjct: 65 ARATM--NKRKILGKEVKV-------NWA--TSPSCQKKDTSNHFHVFVGDLSPDITTED 113
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
+R F PFG I + +++ D TG+SKGYGF++F++ DA+ A ++ G L GR ++
Sbjct: 114 IRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNW 173
Query: 191 VTDR 194
T +
Sbjct: 174 ATRK 177
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
+F LS I T D+ F+ G + D R++ T + KG ++ F + A+ +
Sbjct: 100 VFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKM 159
Query: 78 NGQKLLGIPIIVQ--------PTQAEKNRAGN-TLPNLQPRGTGGPMRLYIGSLHFNITE 128
GQ L G I P + N + + ++ + + +Y G + +TE
Sbjct: 160 AGQWLQGRQIRTNWATRKPPAPKSFQDNGSKHLKFDDIVTQSSPHNCTVYCGGIQSGLTE 219
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
+++ F PFG+I +++ V PD KGY F+ F S D A A +NG + G +K
Sbjct: 220 HLMQQTFSPFGQI--MEIRVFPD----KGYSFVRFSSHDSAAHAIVSVNGTVIEGNLVK 272
>gi|410900508|ref|XP_003963738.1| PREDICTED: nucleolysin TIAR-like isoform 3 [Takifugu rubripes]
Length = 395
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 98/184 (53%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRR-FKGIAYIEFKDPES 70
EE ++T++ LS+ + + + FS +G + ++IT + + + + +++ KD S
Sbjct: 3 EESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSSDPYCFVEFVDHKDAAS 62
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
M N +K+LG + V N A T P+ Q + T +++G L +IT +
Sbjct: 63 ARATM--NKRKILGKEVKV-------NWA--TSPSCQKKDTSNHFHVFVGDLSPDITTED 111
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
+R F PFG I + +++ D TG+SKGYGF++F++ DA+ A ++ G L GR ++
Sbjct: 112 IRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNW 171
Query: 191 VTDR 194
T +
Sbjct: 172 ATRK 175
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
+F LS I T D+ F+ G + D R++ T + KG ++ F + A+ +
Sbjct: 98 VFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKM 157
Query: 78 NGQKLLGIPIIVQ--------PTQAEKNRAGN-TLPNLQPRGTGGPMRLYIGSLHFNITE 128
GQ L G I P + N + + ++ + + +Y G + +TE
Sbjct: 158 AGQWLQGRQIRTNWATRKPPAPKSFQDNGSKHLKFDDIVTQSSPHNCTVYCGGIQSGLTE 217
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
+++ F PFG+I +++ V PD KGY F+ F S D A A +NG + G +K
Sbjct: 218 HLMQQTFSPFGQI--MEIRVFPD----KGYSFVRFSSHDSAAHAIVSVNGTVIEGNLVK 270
>gi|410929559|ref|XP_003978167.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 385
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
++ +T++ LS+ + + E F +G + ++I T ++EF +
Sbjct: 2 DDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIV--DTAGHDPYCFVEFYEHRHA 59
Query: 72 PLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+ +NG+K+LG + V N A T P Q + T +++G L IT D
Sbjct: 60 TATIAAMNGRKILGKEVKV-------NWA--TTPTSQKKDTSSHFHVFVGDLSPEITTDD 110
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFGKI + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++
Sbjct: 111 IKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 170
Query: 191 VTDR 194
T +
Sbjct: 171 ATRK 174
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 20/181 (11%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F GK+ D R++ T + KG ++ F D E+ M
Sbjct: 97 VFVGDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 76 GLNGQKLLGIPIIVQ-------PTQAEKNRAGNTLPNLQPRGTGGPMR--LYIGSLHFNI 126
G GQ L G I P + L + P +Y G + +
Sbjct: 157 G--GQWLGGRQIRTNWATRKPAPKTTNETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGL 214
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE ++R F PFG I +++ V PD KGY F+ F+S + A A +NG + G +
Sbjct: 215 TEQIMRQTFSPFGHI--MEIRVFPD----KGYSFVRFNSHEAAAHAIVSVNGTTIEGYVV 268
Query: 187 K 187
K
Sbjct: 269 K 269
>gi|321479211|gb|EFX90167.1| hypothetical protein DAPPUDRAFT_300177 [Daphnia pulex]
Length = 612
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 16/188 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
++ +S +R + + F G ++ + + T++ KG A++E++ PE+ LA+ +
Sbjct: 122 VYVGSISFELREDTVRQSFHPFGPIKSITMSWDPITQKHKGFAFVEYELPEAAQLALEQM 181
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQP------RGTGGPMRLYIGSLHFNITEDML 131
NG + G I V R N +P QP + R++I S+H ++TE+ +
Sbjct: 182 NGVVIGGRNIKV-------GRPSN-MPQAQPVIDEIMEESRHYNRIFIASVHPDLTEEDI 233
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG-T 190
+ +FE FGKI QL P G+ +GYGFI + + A A +N F+L G+ ++VG
Sbjct: 234 KSVFEAFGKIKMCQLAQGPAPGKHRGYGFIEYETTQSAHDAIASMNMFDLGGQHLRVGRA 293
Query: 191 VTDRNESV 198
+T N SV
Sbjct: 294 ITPPNSSV 301
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F + ED +R F PFG I +I + DP T + KG+ F+ + + A+ A EQ
Sbjct: 121 RVYVGSISFELREDTVRQSFHPFGPIKSITMSWDPITQKHKGFAFVEYELPEAAQLALEQ 180
Query: 176 LNGFELAGRPMKVG 189
+NG + GR +KVG
Sbjct: 181 MNGVVIGGRNIKVG 194
>gi|17432522|gb|AAL39067.1|AF389431_1 single-stranded DNA binding protein precursor [Solanum tuberosum]
Length = 289
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 10/189 (5%)
Query: 10 SPEERDAR---TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
S EER+A IF L + + L E F G V V +I T R +G ++
Sbjct: 89 SYEERNANPDLKIFVGNLPFSVDSAALAELFERAGDVEMVEVIYDKLTGRSRGFGFVTMS 148
Query: 67 DPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGT--GGPM----RLYI 119
E+V A NG ++ G + V A R + N +G GG M R+Y+
Sbjct: 149 SKEAVEAACQQFNGYEIDGRALRVNSGPAPPKRENSFGDNSSYQGGRGGGSMDSSNRVYV 208
Query: 120 GSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGF 179
G+L +++ + L +F GK+ + +++ D D+GRS+G+GF+T+ SA + A E L+G
Sbjct: 209 GNLAWSVDQQQLETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIESLDGV 268
Query: 180 ELAGRPMKV 188
+L GR ++V
Sbjct: 269 DLGGRAIRV 277
>gi|357156104|ref|XP_003577343.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 451
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L E F S+G V +LI K+
Sbjct: 59 IEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSS--- 115
Query: 59 GIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
++++ D S LA+ LNG++L G PI V A R T G +
Sbjct: 116 -FGFVDYYDRRSAALAIVSLNGRQLFGQPIKVNWAYASTQR----------EDTSGHFNI 164
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F + + ++M D TGRS+G+GF++F + DA+ A +LN
Sbjct: 165 FVGDLCPEVTDAALFAFFSAYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINELN 224
Query: 178 GFELAGRPMKVGTVTDRNESVGGGPSNLDTDEM 210
G L R ++ T + + G N D+ M
Sbjct: 225 GKWLGNRQIRCNWAT-KGANAGEEKQNTDSKGM 256
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 41/214 (19%)
Query: 4 AYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
AY+ + IF L + L FFS+ D R++ KT R +G ++
Sbjct: 149 AYASTQREDTSGHFNIFVGDLCPEVTDAALFAFFSAYSTCSDARVMWDQKTGRSRGFGFV 208
Query: 64 EFKDPESVPLAMG-LNGQKLLG---------------------------IPIIVQPTQAE 95
F++ + A+ LNG K LG + +I ++A
Sbjct: 209 SFRNQQDAQTAINELNG-KWLGNRQIRCNWATKGANAGEEKQNTDSKGMVELINGSSEAG 267
Query: 96 KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFG--KIDNIQLMVDPDTG 153
K A P P+ T +Y+G+L +I + + F G I+ +++
Sbjct: 268 KENANEDGPENNPQYT----TVYVGNLPHDINSNDVHRFFHLLGAGSIEEVRVT------ 317
Query: 154 RSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
R KG+GF+ + + ++A A + NG + GR +K
Sbjct: 318 RDKGFGFVRYSTHEEAALAIQTGNGQLVGGRQIK 351
>gi|428170953|gb|EKX39874.1| hypothetical protein GUITHDRAFT_154318 [Guillardia theta CCMP2712]
Length = 270
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 96/186 (51%), Gaps = 9/186 (4%)
Query: 15 DARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLA 74
D R +F L + +D+++ F S G + ++ L N R G ++ FKD +SV A
Sbjct: 23 DKRRVFLGGLPFKATEKDIKKMFESCGAIENIEL-PMNADSRPAGFGFLTFKDADSVAKA 81
Query: 75 MGLNGQKLLGIPIIVQPTQAEKNRAGNT--LPNLQPR-GTGGPMRLYIGSLHFNITEDML 131
+ ++GQ+L+G + V+ + AG PN +P+ G +++G+L +++ ED +
Sbjct: 82 VAMDGQELMGRWVKVKEADGTEGSAGKKPFTPNREPKPKPDGCTTIFMGNLSWDVDEDTI 141
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITF--HSADDAKKAQEQLNGFELAGRPMKVG 189
R F G++ N++ D +TG KG+G + F SA D A+ G +AGR ++V
Sbjct: 142 RSFFADCGEVVNVRFATDRETGDFKGFGHVQFAESSATDLAVAK---GGEFVAGRAIRVD 198
Query: 190 TVTDRN 195
DR
Sbjct: 199 FAEDRK 204
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 93 QAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDT 152
+A K R + G R+++G L F TE ++ +FE G I+NI+L ++ D+
Sbjct: 3 EASKKRKEPEKAKKEDGAAGDKRRVFLGGLPFKATEKDIKKMFESCGAIENIELPMNADS 62
Query: 153 GRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGP 202
R G+GF+TF AD KA ++G EL GR +KV S G P
Sbjct: 63 -RPAGFGFLTFKDADSVAKAV-AMDGQELMGRWVKVKEADGTEGSAGKKP 110
>gi|326472146|gb|EGD96155.1| nucleolin protein Nsr1 [Trichophyton tonsurans CBS 112818]
Length = 479
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 16/182 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-- 76
+F LS + L F G++ R++T ++ R +G Y+EF + E A G
Sbjct: 240 LFVGNLSWNVDEEWLRSEFEEFGELSGTRIVTDRESGRSRGFGYVEFVNVEDAVKAHGAK 299
Query: 77 ----LNGQKL------LGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
L+G+K+ P + NRA + P L+IG++ F+
Sbjct: 300 KDAELDGRKMNLDYANARANGNANPRERADNRAKSFGDQTSPESD----TLFIGNISFSA 355
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
E+M++ +F +G I I+L DPD+GR KG+G++ F S D+A+ A E +G +L GR +
Sbjct: 356 DENMVQELFSKYGTIQGIRLPTDPDSGRPKGFGYVQFSSVDEARAALEAEHGADLGGRSI 415
Query: 187 KV 188
++
Sbjct: 416 RL 417
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 12/188 (6%)
Query: 17 RTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG 76
++IF +LS + L + F+ G+V + T R +G Y+ F E+V A+
Sbjct: 333 KSIFVGRLSWNVDNDWLAKEFAECGEVVSATVQMDRSTGRSRGFGYVHFSTSEAVEKAIE 392
Query: 77 LNGQKLLGIPIIVQPTQ-----AEKNRAGNTLPNLQ--PRGTGGPMRLYIGSLHFNITED 129
LNG+++ G + V + A + + T + P T L++G+L F + +D
Sbjct: 393 LNGKEIDGRAVNVDKSNPPNKDASREKRAKTFGDTTSPPSAT-----LFVGNLSFGMNDD 447
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
L F G++ N++L D ++GR KG+G++ F + AKKA + G EL GR +++
Sbjct: 448 ALWEAFSEHGEVKNVRLPTDRESGRPKGFGYVEFSDVETAKKAHAAMQGVELDGRSVRLD 507
Query: 190 TVTDRNES 197
R++S
Sbjct: 508 FSQPRDDS 515
>gi|410925539|ref|XP_003976238.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Takifugu
rubripes]
Length = 506
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 108 IRQAFAPFGPIKSIDMSFDSVTMKHKGFAFVEYEMPEAAQLALEQMNSVVLGGRNIKVGR 167
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 168 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHPDLSDDDIKSVFEA 211
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FG+I + L +P TGR KGYGF+ + A A+ A +N F+L G+ ++VG
Sbjct: 212 FGRIKSCLLAREPTTGRHKGYGFVEYDKAQSAQDAVASMNLFDLGGQYLRVG 263
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 93 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSFDSVTMKHKGFAFVEYEMPEAAQLALEQ 152
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 153 MNSVVLGGRNIKVG 166
>gi|125599171|gb|EAZ38747.1| hypothetical protein OsJ_23149 [Oryza sativa Japonica Group]
Length = 220
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 102/187 (54%), Gaps = 8/187 (4%)
Query: 32 DLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGL-NGQKLLGIPIIVQ 90
++ + FS G+V +V++I T R +G A++ E A+ + NG L G V
Sbjct: 5 EISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVTMATAEEAATAIQMFNGALLGGRTARVN 64
Query: 91 ----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQL 146
P E+ G+ + R G ++Y G+L + + D LR FE + + ++
Sbjct: 65 YPEVPRGGERA-VGSAAATRENRRDDGTFKIYAGNLGWGVRADALRAAFEGQPGLLDARV 123
Query: 147 MVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLD 206
+ + D+GRS+G+GF++F +A+DA+ A E L+G EL GRP+++ ++ ++N + G PS +
Sbjct: 124 IFERDSGRSRGFGFVSFRTAEDAQAALEALDGVELEGRPLRL-SMAEQNPTA-GSPSTVQ 181
Query: 207 TDEMERA 213
+ E E A
Sbjct: 182 SQEEETA 188
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
+T + F G++DN+Q++ D T RS+G+ F+T +A++A A + NG L GR
Sbjct: 1 MTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVTMATAEEAATAIQMFNGALLGGRT 60
Query: 186 MKV 188
+V
Sbjct: 61 ARV 63
>gi|432906488|ref|XP_004077556.1| PREDICTED: nucleolysin TIAR-like [Oryzias latipes]
Length = 382
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 99/184 (53%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRR-FKGIAYIEFKDPES 70
+E RT++ LS+ + + + F+ +G + ++IT + + + + + E +D +
Sbjct: 3 DESHPRTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAAA 62
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
AM NG+K+LG + V N A T P+ Q + T +++G L+ +I+ +
Sbjct: 63 ALAAM--NGRKILGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLNPDISTED 111
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
+R F PFGKI + +++ D TG+SKGYGF++F++ DA+ A + G L GR ++
Sbjct: 112 VRAAFTPFGKISDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHMAGQWLGGRQIRTNW 171
Query: 191 VTDR 194
T +
Sbjct: 172 ATRK 175
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 28/185 (15%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F L+ I T D+ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 98 VFVGDLNPDISTEDVRAAFTPFGKISDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHM 157
Query: 76 GLNGQKLLG-------------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSL 122
GQ L G P +Q + +++ R + P+ +Y G +
Sbjct: 158 A--GQWLGGRQIRTNWATRKPPAPKSLQDSVSKQLRFEEVVTQSSPQNC----TVYCGGI 211
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
++E ++R F PFG+I +++ V P+ KGY FI F S D A A +NG +
Sbjct: 212 QSELSEHLMRQTFSPFGQI--MEIRVFPE----KGYSFIRFSSHDSAAHAIVSVNGTSIE 265
Query: 183 GRPMK 187
G +K
Sbjct: 266 GHAVK 270
>gi|41055734|ref|NP_956476.1| TIA1 cytotoxic granule-associated RNA binding protein 1 [Danio
rerio]
gi|28277744|gb|AAH45485.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
gi|44890544|gb|AAH66734.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 96/184 (52%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF-KDPES 70
+E RT++ LS+ + + + FS +G + ++I T ++EF ++ +
Sbjct: 4 DEDQPRTLYVGNLSRDVTEALILQVFSQIGPCKSCKMIL--DTTGNDPYCFVEFYENRHA 61
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+NG+K+LG + V N A + P+ Q + T +++G L I+ D
Sbjct: 62 AAALAAMNGRKILGKDMKV-------NWA--STPSSQKKDTSNHFHVFVGDLSPEISTDD 112
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
+R F PFGKI + +++ D TG+SKGYGFI+F + DA+ A +Q+NG L GR ++
Sbjct: 113 VRAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNW 172
Query: 191 VTDR 194
T +
Sbjct: 173 ATRK 176
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 1 MRPAYSDDLSPEERDART---IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRF 57
M+ ++ S +++D +F LS I T D+ F+ GK+ D R++ T +
Sbjct: 78 MKVNWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVKDLATGKS 137
Query: 58 KGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIV-----QPTQAEKNRAGNTLPNLQ---- 107
KG +I F + A+ +NGQ L G I +P+ + N G + +L
Sbjct: 138 KGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAPKSNNEGASSKHLSYEEV 197
Query: 108 -PRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSA 166
+ + +Y G + +++ ++R F PFG+I +++ V P+ KGY F+ F S
Sbjct: 198 LNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQI--MEIRVFPE----KGYSFVRFDSH 251
Query: 167 DDAKKAQEQLNGFELAGRPMKV 188
+ A A +NG + G +K
Sbjct: 252 EGAAHAIVSVNGTCIEGHTVKC 273
>gi|320581683|gb|EFW95902.1| Poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 629
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 14/183 (7%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-G 76
IF L I + L + FS+ GK+ ++ T ++ KG ++ +++ ES A+
Sbjct: 136 NIFIKNLHPAIDNKTLHDTFSAFGKILSCKIAT-DENGNSKGFGFVHYEESESAKAAIEN 194
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNT---LPNLQPRGTGGPMRLYIGSLHFNITEDMLRG 133
+NG L + V P A+K+R + N +Y+ +++ N ED LR
Sbjct: 195 VNGMLLNDHEVYVGPHLAKKDRQSKMRELIANF--------TNVYVKNINLNWDEDKLRE 246
Query: 134 IFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTD 193
F PFG I +I L D ++G+S+G+GF+ F +DA KA E+LN ++ G+ + VG
Sbjct: 247 TFSPFGTISSIFLSKD-ESGKSRGFGFVNFEKHEDAVKAVEELNNKDIDGQKLYVGRAQK 305
Query: 194 RNE 196
++E
Sbjct: 306 KSE 308
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-G 76
+++ +L + DL E FS +G+V +R+ +++ G AY+ F+ A+
Sbjct: 48 SLYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYAYVNFQSHADGEKALEE 107
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
LN + G + +Q + P+L+ G+G ++I +LH I L F
Sbjct: 108 LNYTPIKGKACRIMWSQRD--------PSLRRNGSGN---IFIKNLHPAIDNKTLHDTFS 156
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + ++ D + G SKG+GF+ + ++ AK A E +NG L + VG
Sbjct: 157 AFGKILSCKIATD-ENGNSKGFGFVHYEESESAKAAIENVNGMLLNDHEVYVG 208
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 84/164 (51%), Gaps = 12/164 (7%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF-KDPESVPLAMGLNGQKLLGIPIIVQP 91
L E FS G + + ++ +++ + +G ++ F K ++V LN + + G + V
Sbjct: 244 LRETFSPFGTISSI-FLSKDESGKSRGFGFVNFEKHEDAVKAVEELNNKDIDGQKLYVGR 302
Query: 92 TQAEKNRAGNTLPNLQP-------RGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNI 144
Q + R + + + G L++ +L +I + L F+P+G I +
Sbjct: 303 AQKKSERMESLKHQYEAARQEQLNKYQG--YNLFVKNLDDSIDDAKLEEEFKPYGTITSA 360
Query: 145 QLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
++M+D D G+SKG+GF+ + S ++A KA +++ +AG+P+ V
Sbjct: 361 KVMLD-DAGKSKGFGFVCYSSPEEATKAITEMHQRMVAGKPLYV 403
>gi|242822492|ref|XP_002487897.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
gi|218712818|gb|EED12243.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
Length = 479
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 8/184 (4%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLN 78
+F LS + L F G++ VR++T ++ R +G Y+E+ D S A
Sbjct: 233 LFVGNLSWNVDEEWLRREFEEFGELSGVRIMTERESGRSRGFGYVEYADASSAKAAYEAK 292
Query: 79 GQKLLGIPII----VQP----TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+ I +P QA + +A N + + + L++G+L F + E+
Sbjct: 293 KDAEIDGRTINLDYAKPRDANNQAPREKAQNRARSFGDQTSPESNTLFVGNLVFGVDENA 352
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
+R +FE G+I I+L D +TGR KGYG++ F S D+A++A L G ++ GR +++
Sbjct: 353 VREVFEGQGQIQGIRLPTDAETGRPKGYGYVEFSSVDEARQALNDLQGTDIGGRAIRLDF 412
Query: 191 VTDR 194
T R
Sbjct: 413 STPR 416
>gi|380483681|emb|CCF40465.1| cutinase negative acting protein [Colletotrichum higginsianum]
Length = 401
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 8/169 (4%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-G 76
T+F L+ + L E F + R++T T R +G Y++F PE+ A+ G
Sbjct: 209 TLFVGSLAWAVDDNSLYEAFQEFSDLTGARVVTDKATGRSRGFGYVDFATPEAAAAALEG 268
Query: 77 LNGQKLLG----IPIIVQPTQAEKNRAGNTLPNLQPRG-TGGPMR--LYIGSLHFNITED 129
G++L G I Q E N Q G T P L++G+L F++ +D
Sbjct: 269 SQGRELAGRAMNIDFSGQKPAGEGNPQARAFDRAQKHGDTVSPESDTLFVGNLPFDVDQD 328
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
+R F ++ +++L DP++G KG+G+++F+S DDAK A QLNG
Sbjct: 329 TVRAFFSEAAEVTSVRLPTDPESGNLKGFGYVSFNSIDDAKTAFAQLNG 377
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
L++GSL + + ++ L F+ F + +++ D TGRS+G+G++ F + + A A E
Sbjct: 210 LFVGSLAWAVDDNSLYEAFQEFSDLTGARVVTDKATGRSRGFGYVDFATPEAAAAALEGS 269
Query: 177 NGFELAGRPMKV 188
G ELAGR M +
Sbjct: 270 QGRELAGRAMNI 281
>gi|380748929|ref|NP_001244132.1| nucleolysin TIAR isoform 2 [Gallus gallus]
gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus]
Length = 372
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 96/184 (52%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFYEHRHA 59
Query: 72 PLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
A+ +NG+K++G + V N A T P+ Q + T +++G L IT +
Sbjct: 60 ASALAAMNGRKIMGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTED 110
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++
Sbjct: 111 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 170
Query: 191 VTDR 194
T +
Sbjct: 171 ATRK 174
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F+ G++ D R++ T + KG ++ F D E+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + NT ++ + + +Y G + +TE
Sbjct: 157 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTE 216
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I +++ V PD KGY F+ F+S + A A +NG + G +K
Sbjct: 217 QLMRQTFSPFGQI--MEIRVFPD----KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVK 269
>gi|320583460|gb|EFW97673.1| nuclear localization sequence binding protein [Ogataea
parapolymorpha DL-1]
Length = 500
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 107/204 (52%), Gaps = 21/204 (10%)
Query: 10 SPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPE 69
S + ++ T+F +L+ + + L E F S+ V R++T +T R +G Y++F+ E
Sbjct: 253 SKKPKEVATLFVGRLAWAVDDQRLLEEFQSLDGVLSARVMTERETGRSRGYGYVDFESKE 312
Query: 70 SVPLAM-GLNGQKLLGIPIIVQ--------PTQAEK-----NRAGNTLPNLQPRGTGGPM 115
A+ G+++ G PI + P+Q +K + G+T P+ QP T
Sbjct: 313 QAQKALEQFQGREIEGRPINLDMSTSKPQTPSQNQKFQDRAKKYGDT-PS-QPSDT---- 366
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
L++G+L F D L+ FE G + I++ P++ + KG+G++ F S D+AK A E
Sbjct: 367 -LFVGNLSFQADRDTLKEFFEQHGTVLGIRIPTHPESEQPKGFGYVQFGSVDEAKAALEA 425
Query: 176 LNGFELAGRPMKVGTVTDRNESVG 199
LNG +AGRP+++ R+ + G
Sbjct: 426 LNGEYIAGRPVRLDFSAPRDPNGG 449
>gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA binding protein [Danio rerio]
gi|160773363|gb|AAI55270.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 96/184 (52%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF-KDPES 70
+E RT++ LS+ + + + FS +G + ++I T ++EF ++ +
Sbjct: 4 DEDQPRTLYVGNLSRDVTEALILQVFSQIGPCKSCKMIL--DTTGNDPYCFVEFYENRHA 61
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+NG+K+LG + V N A + P+ Q + T +++G L I+ D
Sbjct: 62 AAALAAMNGRKILGKDMKV-------NWA--STPSSQKKDTSNHFHVFVGDLSPEISTDD 112
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
+R F PFGKI + +++ D TG+SKGYGFI+F + DA+ A +Q+NG L GR ++
Sbjct: 113 VRAAFAPFGKISDARVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNW 172
Query: 191 VTDR 194
T +
Sbjct: 173 ATRK 176
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 1 MRPAYSDDLSPEERDART---IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRF 57
M+ ++ S +++D +F LS I T D+ F+ GK+ D R++ T +
Sbjct: 78 MKVNWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVRDLATGKS 137
Query: 58 KGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIV-----QPTQAEKNRAGNTLPNLQ---- 107
KG +I F + A+ +NGQ L G I +P+ + N G + +L
Sbjct: 138 KGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAPKSNNEGASSKHLSYEEV 197
Query: 108 -PRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSA 166
+ + +Y G + +++ ++R F PFG+I +++ V P+ KGY F+ F S
Sbjct: 198 LNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQI--MEIRVFPE----KGYSFVRFDSH 251
Query: 167 DDAKKAQEQLNGFELAGRPMKV 188
+ A A +NG + G +K
Sbjct: 252 EGAAHAIVSVNGTCIEGHTVKC 273
>gi|88911212|gb|ABD58896.1| chloroplast single strand DNA binding protein [Mesostigma viride]
Length = 299
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 91/176 (51%), Gaps = 16/176 (9%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQP 91
L + FS G+V+ ++ ++ R +G A++ P++ A GL+G +L G I V
Sbjct: 106 LNQAFSQFGEVKAAEVVLDRESGRSRGFAFVTMASPDAAEKARRGLDGTELAGRAIRVNF 165
Query: 92 TQAEKNRA------------GNTLPNLQPRG---TGGPMRLYIGSLHFNITEDMLRGIFE 136
Q + RA + PRG G RLY+G+L +++ + ML +F
Sbjct: 166 PQPKGERAPRAERGERSERSERSERTYTPRGDGEAGDANRLYVGNLPWSMDDGMLEDLFM 225
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
FG ++ ++++D D+GRS+G+ F+ + ++A +A L+G E+ GR ++V T
Sbjct: 226 EFGTVNYARVVMDRDSGRSRGFAFVALSTPEEANEAMANLDGEEIGGRTIRVNLAT 281
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 54/82 (65%)
Query: 107 QPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSA 166
Q T +LY+G+L ++ ++ML F FG++ ++++D ++GRS+G+ F+T S
Sbjct: 82 QATSTAASTKLYVGNLAWSCDDEMLNQAFSQFGEVKAAEVVLDRESGRSRGFAFVTMASP 141
Query: 167 DDAKKAQEQLNGFELAGRPMKV 188
D A+KA+ L+G ELAGR ++V
Sbjct: 142 DAAEKARRGLDGTELAGRAIRV 163
>gi|148666754|gb|EDK99170.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_d
[Mus musculus]
Length = 385
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 96/184 (52%), Gaps = 10/184 (5%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I +T ++EF + +
Sbjct: 10 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHA 69
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+NG+K++G + V N A T P+ Q + T +++G L IT +
Sbjct: 70 AAALAAMNGRKIMGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTED 120
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++
Sbjct: 121 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 180
Query: 191 VTDR 194
T +
Sbjct: 181 ATRK 184
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F+ G++ D R++ T + KG ++ F D E+ M
Sbjct: 107 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 166
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + NT + + + +Y G + +TE
Sbjct: 167 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTE 226
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I I++ D KGY F+ F S + A A +NG + G +K
Sbjct: 227 QLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNGTTIEGHVVK 279
>gi|255760009|ref|NP_001157550.1| nucleolysin TIA-1 isoform 2 [Mus musculus]
gi|28386187|gb|AAH46812.1| Tia1 protein [Mus musculus]
Length = 377
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 96/184 (52%), Gaps = 10/184 (5%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I +T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHA 61
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+NG+K++G + V N A T P+ Q + T +++G L IT +
Sbjct: 62 AAALAAMNGRKIMGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTED 112
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++
Sbjct: 113 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 172
Query: 191 VTDR 194
T +
Sbjct: 173 ATRK 176
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F+ G++ D R++ T + KG ++ F D E+ M
Sbjct: 99 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 158
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + NT + + + +Y G + +TE
Sbjct: 159 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTE 218
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I I++ D KGY F+ F S + A A +NG + G +K
Sbjct: 219 QLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNGTTIEGHVVK 271
>gi|260828249|ref|XP_002609076.1| hypothetical protein BRAFLDRAFT_60256 [Branchiostoma floridae]
gi|229294430|gb|EEN65086.1| hypothetical protein BRAFLDRAFT_60256 [Branchiostoma floridae]
Length = 495
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 15/178 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
I+ + +R L++ FS G ++++ L T + KG A+IE++ PE+ LA+ +
Sbjct: 72 IYVGSIYYELREDTLKQAFSPFGPIKNIDLSWDPLTMKHKGYAFIEYEIPEAAQLALEQM 131
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQP------RGTGGPMRLYIGSLHFNITEDML 131
NG L G I V R N + + QP R+Y+ S+H ++ D +
Sbjct: 132 NGVMLGGRNIKV-------GRPSN-MASAQPIVDQLVEEAKHYNRIYVSSVHPDLAADDI 183
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
+ +FE FGKI + +L D TG+ KGYGF+ + A+ A +N F+L G+ ++VG
Sbjct: 184 KSVFEAFGKIKSCELAPDAVTGKHKGYGFLEYEKPQSAQDAIASMNLFDLGGQYLRVG 241
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED L+ F PFG I NI L DP T + KGY FI + + A+ A EQ
Sbjct: 71 RIYVGSIYYELREDTLKQAFSPFGPIKNIDLSWDPLTMKHKGYAFIEYEIPEAAQLALEQ 130
Query: 176 LNGFELAGRPMKVG 189
+NG L GR +KVG
Sbjct: 131 MNGVMLGGRNIKVG 144
>gi|346321757|gb|EGX91356.1| nucleolin protein Nsr1, putative [Cordyceps militaris CM01]
Length = 438
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-G 76
T+F LS + L E F S + R++T T R +G Y++F D ES A
Sbjct: 182 TLFAGSLSWGVDDNALYEAFKSFSGLVHARVVTDKNTGRSRGFGYVDFADSESATKAYEA 241
Query: 77 LNGQKLLG----------IPIIVQPTQAEKNRA---GNTLPNLQPRGTGGPMRLYIGSLH 123
+ GQ++ G P +P +RA G+TL + L++G+L
Sbjct: 242 MQGQEVDGRALNLDYANAKPAESKPQDRAADRASRHGDTL-------SAESETLFVGNLP 294
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
F+ +D +R F ++ +I+L DP++G KG+G++TF+S DDAK A E NG
Sbjct: 295 FDTEQDAVREFFGEVAEVASIRLPTDPESGNLKGFGYVTFNSIDDAKTALEAKNG 349
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 94 AEKNRAGNTL--PNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPD 151
++K +A +T+ + + + P L+ GSL + + ++ L F+ F + + +++ D +
Sbjct: 158 SKKRKAEDTVDEASKKAKSDDAPSTLFAGSLSWGVDDNALYEAFKSFSGLVHARVVTDKN 217
Query: 152 TGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
TGRS+G+G++ F ++ A KA E + G E+ GR + +
Sbjct: 218 TGRSRGFGYVDFADSESATKAYEAMQGQEVDGRALNL 254
>gi|359322009|ref|XP_850457.3| PREDICTED: uncharacterized protein LOC483825 [Canis lupus
familiaris]
Length = 1009
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQP 91
L FS GK V+++T + + R +G ++ F+ E+ A+ LNG+++ G P+ V
Sbjct: 344 LRAVFSEYGKTLSVKVMT-DASGRSRGFGFVSFESHEAARRAVEALNGRQVDGQPLFVGR 402
Query: 92 TQAEKNRAGNTLPNLQPRGTGGPMR-----LYIGSLHFNITEDMLRGIFEPFGKIDNIQL 146
Q + R + R G R LY+ +L + ED LR F FG + +++
Sbjct: 403 AQRKAERQAELRRAFEQRQQDGLRRAQGAKLYVKNLDDAVDEDRLRREFSGFGAVSRVKI 462
Query: 147 MVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRN 195
M + GRSKG+G I F SAD+A +A ++NG L +P+ + R
Sbjct: 463 MRE--EGRSKGFGLICFSSADEAARALAEMNGRVLGSKPLSIALAQSRR 509
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 97/179 (54%), Gaps = 9/179 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
+F L + + + L E FS+ GK+ ++++ R +G A++ F++ + A+ +
Sbjct: 238 VFIKNLDRSVDDKALFERFSAFGKILSSKVVS--DERGSRGYAFVHFQEQSAADRAIEHM 295
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG +L G + V Q+ + R L+ R G LYI + + + LR +F
Sbjct: 296 NGAQLRGCRLFVGRFQSRQAREAE----LRSR-AGEFTNLYIKNFGGRMDDARLRAVFSE 350
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
+GK ++++M D +GRS+G+GF++F S + A++A E LNG ++ G+P+ VG + E
Sbjct: 351 YGKTLSVKVMTD-ASGRSRGFGFVSFESHEAARRAVEALNGRQVDGQPLFVGRAQRKAE 408
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 37 FSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQPTQAE 95
FS+ G V +R+ TRR G AY+ F A+ +N L G P+ + +Q +
Sbjct: 168 FSAAGPVLSIRICRDLLTRRSLGYAYVNFLRLADAQRALDTMNFDVLRGRPLRLMWSQRD 227
Query: 96 KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS 155
+L+ G G ++I +L ++ + L F FGKI + +++ D + G S
Sbjct: 228 A--------HLRKSGVGN---VFIKNLDRSVDDKALFERFSAFGKILSSKVVSD-ERG-S 274
Query: 156 KGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRN 195
+GY F+ F A +A E +NG +L G + VG R
Sbjct: 275 RGYAFVHFQEQSAADRAIEHMNGAQLRGCRLFVGRFQSRQ 314
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G L +TED L F G + +I++ D T RS GY ++ F DA++A + +
Sbjct: 150 LYVGDLDAEVTEDALFRKFSAAGPVLSIRICRDLLTRRSLGYAYVNFLRLADAQRALDTM 209
Query: 177 NGFELAGRPMKV 188
N L GRP+++
Sbjct: 210 NFDVLRGRPLRL 221
>gi|348507121|ref|XP_003441105.1| PREDICTED: nucleolysin TIAR [Oreochromis niloticus]
Length = 382
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 99/184 (53%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRR-FKGIAYIEFKDPES 70
+E RT++ LS+ + + + F+ +G + ++IT + + + + + E +D +
Sbjct: 3 DETHPRTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAAA 62
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
AM NG+K+LG + V N A T P+ Q + T +++G L+ IT +
Sbjct: 63 ALAAM--NGRKILGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLNPEITTED 111
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
+R F PFGKI + +++ D TG+SKGYGF++F++ DA+ A ++G L GR ++
Sbjct: 112 VRVAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIINMSGQWLGGRQIRTNW 171
Query: 191 VTDR 194
T +
Sbjct: 172 ATRK 175
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 24/183 (13%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
+F L+ I T D+ F+ GK+ D R++ T + KG ++ F + A+ +
Sbjct: 98 VFVGDLNPEITTEDVRVAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIINM 157
Query: 78 NGQKLLG-------------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHF 124
+GQ L G P Q +++ R + + P+ +Y G +
Sbjct: 158 SGQWLGGRQIRTNWATRKPPAPKSTQDNGSKQLRFDDVVNQSSPQNC----TVYCGGIQS 213
Query: 125 NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
++E ++R F PFG+I +++ V P+ KGY FI F S D A A +NG + G
Sbjct: 214 GLSEHLMRQTFSPFGQI--MEVRVFPE----KGYSFIRFSSHDSAAHAIVSVNGTVIEGH 267
Query: 185 PMK 187
+K
Sbjct: 268 VVK 270
>gi|326427350|gb|EGD72920.1| hypothetical protein PTSG_04652 [Salpingoeca sp. ATCC 50818]
Length = 976
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 10/175 (5%)
Query: 17 RTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG 76
RT+F L + L+ FF G +RD+RL+ + + KG AYIEF++ S+ A+
Sbjct: 690 RTVFVKNLDFAVDEDMLQMFFKDCGAIRDIRLVR-KPSGQSKGFAYIEFEEKSSLAFALS 748
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGG--PMRLYIGSLHFNITEDMLRGI 134
+ Q + G P++V P A L+P+ G P +++ L + TE +R +
Sbjct: 749 KDRQFMNGRPVLVDPCVDRSKTA------LRPKHQTGFDPRTVFVKRLDHSCTEQDVRTL 802
Query: 135 FEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FE +G + ++ MV G+ +G+ ++ F ++ DA A L+ E GR ++V
Sbjct: 803 FEQYGAVKEVR-MVTTLAGKPRGFAYVEFEASRDAATAIMNLDKAEFKGRQLQVA 856
>gi|440640661|gb|ELR10580.1| hypothetical protein GMDG_04852 [Geomyces destructans 20631-21]
Length = 447
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
E+ ++ +F LS I L F G++ R+I+ ++ R KG Y+EF +
Sbjct: 187 EDTGSKNLFVGNLSWNIDDEWLYREFEEFGEITGARVISDRESGRSKGFGYVEFANSADA 246
Query: 72 PLAMGLNGQKLL-GIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR-----LYIGSLHFN 125
A+ L+ G V + N A N + + G L++G++ F
Sbjct: 247 AAALKAKKGALIDGREANVDFSTPRDNAAPKDRANARAQTYGDAKNPESDTLFVGNISFE 306
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
EDML F G + N++L D D+G KG+G+ITF S +DAK A E + G ++ GRP
Sbjct: 307 ANEDMLGEAFGAHGTVVNVRLPTDMDSGNPKGFGYITFSSVEDAKNAMENMMGADVGGRP 366
Query: 186 MKVGTVTDRNE 196
+++ T R E
Sbjct: 367 VRLDYATPRPE 377
>gi|119492702|ref|XP_001263670.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
gi|119411830|gb|EAW21773.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
Length = 533
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 18/199 (9%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF------KDPESVP 72
+F LS + L + F + G++ VR++T + R +G Y+E+ +
Sbjct: 288 LFVGNLSWNVDEEWLRQEFETFGELSGVRIVTDRDSGRSRGFGYVEYVSAADAAKAYNAK 347
Query: 73 LAMGLNGQKL-----LGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
++G+K+ G P ++RA N + + L++G++ F+
Sbjct: 348 KDTEIDGRKINLDYATGRPANNNNNNNNQDRAQARARNFGDQASPESDTLFVGNIPFSAN 407
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
ED + +F G I I+L DP++GR KG+G++ F S D+A++A LNG EL GRP++
Sbjct: 408 EDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQAFNDLNGAELNGRPVR 467
Query: 188 VGTVTDRNESVGGGPSNLD 206
+ T R PSN D
Sbjct: 468 LDFSTPR-------PSNGD 479
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 111 TGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAK 170
+G L++G+L +N+ E+ LR FE FG++ ++++ D D+GRS+G+G++ + SA DA
Sbjct: 282 SGASANLFVGNLSWNVDEEWLRQEFETFGELSGVRIVTDRDSGRSRGFGYVEYVSAADAA 341
Query: 171 KAQEQLNGFELAGRPMKVGTVTDR 194
KA E+ GR + + T R
Sbjct: 342 KAYNAKKDTEIDGRKINLDYATGR 365
>gi|371927697|pdb|3UWT|A Chain A, Crystal Structure Of A Rna Binding Domain Of Poly-U
Binding Splicing Factor 60kda (Puf60) From Homo Sapiens
At 2.50 A Resolution
Length = 200
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 27/170 (15%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM------GLNGQKL-LGI 85
+ + F+ G ++ + + T + KG A++E++ PE+ LA+ L G+ + +G
Sbjct: 29 IRQAFAPFGPIKSIDXSWDSVTXKHKGFAFVEYEVPEAAQLALEQXNSVXLGGRNIKVGR 88
Query: 86 PIIVQPTQ------AEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFG 139
P + Q AE+ RA N R+Y+ S+H ++++D ++ +FE FG
Sbjct: 89 PSNIGQAQPIIDQLAEEARAFN--------------RIYVASVHQDLSDDDIKSVFEAFG 134
Query: 140 KIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
KI + L DP TG+ KGYGFI + A ++ A N F+L G+ ++VG
Sbjct: 135 KIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSXNLFDLGGQYLRVG 184
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I D T + KG+ F+ + + A+ A EQ
Sbjct: 14 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDXSWDSVTXKHKGFAFVEYEVPEAAQLALEQ 73
Query: 176 LNGFELAGRPMKVG 189
N L GR +KVG
Sbjct: 74 XNSVXLGGRNIKVG 87
>gi|187607191|ref|NP_001120082.1| poly-U binding splicing factor 60KDa [Xenopus (Silurana)
tropicalis]
gi|165971204|gb|AAI58522.1| LOC100145091 protein [Xenopus (Silurana) tropicalis]
Length = 507
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 93 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 152
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ R+ N R+Y+ S+H +++++ ++ +FE
Sbjct: 153 PSNIGQAQPIIDQ--LAEEARSFN--------------RIYVASVHQDLSDEDIKSVFEA 196
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L DP TG+ KGYGFI + ++ A +N F+L G+ ++VG
Sbjct: 197 FGKIKSCMLARDPTTGKHKGYGFIEYEKGQSSQDAVSSMNLFDLGGQYLRVG 248
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 78 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 137
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 138 MNSVMLGGRNIKVG 151
>gi|358055852|dbj|GAA98197.1| hypothetical protein E5Q_04880 [Mixia osmundae IAM 14324]
Length = 545
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 12/181 (6%)
Query: 17 RTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG 76
+ +F LS I L+E F S G++ R++T +T + +G Y++F D A+
Sbjct: 288 KNVFVGGLSWGITNESLQEAFESCGEIVSARVVTDRETGKSRGFGYVDFVDAAGAKAALE 347
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRG------TGGPMRLYIGSLHFNITEDM 130
+ G +L G I V + R G P P+ + +++G+L F T+D
Sbjct: 348 MAGTELDGRTINVDLSAPRPPRDG---PGATPKKQFNDELSAPSQTVFVGNLSFESTQDA 404
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ---LNGFELAGRPMK 187
+ F FG ++++++ D +TGR KG+ ++ F D AKKA +Q G E+ GR ++
Sbjct: 405 VWESFSDFGGVNSVRVPTDMETGRPKGFAYVEFGDVDSAKKAVDQGRSSEGLEIDGRRVR 464
Query: 188 V 188
+
Sbjct: 465 L 465
>gi|449437482|ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449528229|ref|XP_004171108.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 323
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 94/180 (52%), Gaps = 5/180 (2%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPL 73
R+A ++ L + + L E F+ G V V++I T R +G A++ E
Sbjct: 112 REAGKLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKE 171
Query: 74 AMGL-NGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
A+ + +G ++ G + V P EK G + + + P ++Y G+L + +T
Sbjct: 172 AIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPRIRSSYNKFVDSPHKIYAGNLGWGLTS 231
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
LR FE I + +++ D +G+S+G+GF++F +A+DA+ A E +NG E+ GRP+++
Sbjct: 232 QSLRDAFENQPGILSAKIIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRL 291
>gi|449279837|gb|EMC87291.1| Poly(U)-binding-splicing factor PUF60, partial [Columba livia]
Length = 513
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 41/204 (20%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 70 FGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 129
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E++ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 130 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 187
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FGKI + L DP TG+ KGYG
Sbjct: 188 FN--------------RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG 233
Query: 160 FITFHSADDAKKAQEQLNGFELAG 183
FI + A ++ A +N F+L G
Sbjct: 234 FIEYEKAQSSQDAVSSMNLFDLGG 257
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 93 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 152
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 153 MNSVMLGGRNIKVG 166
>gi|410922589|ref|XP_003974765.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 386
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
E+ RT++ LS+ + + + F+ +G + ++I T ++EF +
Sbjct: 2 EDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIV--DTAGNDPYCFVEFYEHRHA 59
Query: 72 PLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
++ +NG+K++G + V N A T P Q + T +++G L IT D
Sbjct: 60 AASLAAMNGRKIMGKEVKV-------NWA--TTPTSQKKDTSNHFHVFVGDLSPEITTDD 110
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++
Sbjct: 111 VKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 170
Query: 191 VTDR 194
T +
Sbjct: 171 ATRK 174
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F G++ D R++ T + KG ++ F D E+ M
Sbjct: 97 VFVGDLSPEITTDDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 76 G---LNGQKLLGIPIIVQP----TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P T E N ++ + + +Y G + +TE
Sbjct: 157 GGQWLGGRQIRTNWATRKPPAPKTTYESNSKQLCFDDVVNQSSPSNCTVYCGGVSTGLTE 216
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG I I++ D KGY F+ F+S + A A +NG + G +K
Sbjct: 217 QLMRQTFSPFGPIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGSSIEGHVVK 269
>gi|241947949|ref|XP_002416697.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
gi|223640035|emb|CAX44279.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
Length = 423
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 4/184 (2%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
T+F +LS I L+ F +G V R+I T + +G Y++F+ + A+
Sbjct: 197 TLFVGRLSWNIDDSWLKREFEHIGGVISARVIMERATGKSRGYGYVDFETKSAAEKALEE 256
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM---RLYIGSLHFNITEDMLRG 133
+ G+++ G PI + + + + + +T + G L++G+L FN D L
Sbjct: 257 MQGKEIDGRPINLDMSTGKPHASRSTNDRAKQYGDSQSALSDTLFVGNLSFNANRDNLFT 316
Query: 134 IFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTD 193
+F +G + + ++ PDT + KG+G++ F S D+AK A E LNG + GRP ++ T
Sbjct: 317 VFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGEYIEGRPCRLDFSTP 376
Query: 194 RNES 197
R+ S
Sbjct: 377 RDNS 380
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 51/81 (62%)
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
P L++G L +NI + L+ FE G + + +++++ TG+S+GYG++ F + A+KA
Sbjct: 195 PATLFVGRLSWNIDDSWLKREFEHIGGVISARVIMERATGKSRGYGYVDFETKSAAEKAL 254
Query: 174 EQLNGFELAGRPMKVGTVTDR 194
E++ G E+ GRP+ + T +
Sbjct: 255 EEMQGKEIDGRPINLDMSTGK 275
>gi|22208507|gb|AAM94322.1| putative oligouridylate binding protein [Sorghum bicolor]
Length = 581
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 17/195 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
M P S +L P + R+++ +S ++ L+E F S+G V +LI K+
Sbjct: 49 MEPIVSGNLPPGFDSSTCRSVYVGNISLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS--- 105
Query: 59 GIAYIEFKDPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
+I++ D LA + LNG+ L G PI V R T G +
Sbjct: 106 -FGFIDYYDRRYAALAILSLNGRPLYGQPIKVNWAYTSTQR----------EDTSGHFNI 154
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F + + ++M D TGRS+G+GF++F + DA+ A LN
Sbjct: 155 FVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLN 214
Query: 178 GFELAGRPMKVGTVT 192
G L R ++ T
Sbjct: 215 GKWLGNRQIRCNWAT 229
>gi|449297589|gb|EMC93607.1| hypothetical protein BAUCODRAFT_76311, partial [Baudoinia
compniacensis UAMH 10762]
Length = 253
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 21/186 (11%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-G 76
T+F LS + L F G++ R++T +T + KG ++EFK + A+ G
Sbjct: 2 TLFVGGLSWNVDEEWLMREFEEFGELASTRIMTDRETGKSKGFGFVEFKSVDGAIKAVEG 61
Query: 77 LNGQKLLGIPIIVQ------------PTQAEKNRAGN--TLPNLQPRGTGGPMRLYIGSL 122
G ++ G + + P Q +RAG +P +P T L++G++
Sbjct: 62 KQGGEIDGRNVRLDFTEGRSQNNQRTPQQRSSDRAGKFGDVPK-EPSST-----LFVGNV 115
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
F+ EDM+ +F +G I ++L D DTG KG+G++ S DDAK A E L G E+A
Sbjct: 116 SFDANEDMVTEVFSEYGSIKAVRLPTDRDTGALKGFGYVEMFSIDDAKVAFEALQGAEIA 175
Query: 183 GRPMKV 188
GR +++
Sbjct: 176 GRSIRL 181
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 57/98 (58%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
L++G L +N+ E+ L FE FG++ + ++M D +TG+SKG+GF+ F S D A KA E
Sbjct: 3 LFVGGLSWNVDEEWLMREFEEFGELASTRIMTDRETGKSKGFGFVEFKSVDGAIKAVEGK 62
Query: 177 NGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAG 214
G E+ GR +++ R+++ P +D + G
Sbjct: 63 QGGEIDGRNVRLDFTEGRSQNNQRTPQQRSSDRAGKFG 100
>gi|406946237|gb|EKD77506.1| glycine-rich RNA-binding protein [uncultured bacterium]
Length = 113
Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 54/80 (67%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
++Y+G+L +N TED LR F FG I++I+L++D +TGRSKG+GFIT+ S D + A
Sbjct: 5 KIYVGNLSYNTTEDELRDYFSQFGNIEDIKLIIDFNTGRSKGFGFITYASIQDCESAVTT 64
Query: 176 LNGFELAGRPMKVGTVTDRN 195
NG ++ GR +KV D N
Sbjct: 65 ANGVDMGGRKLKVNIARDDN 84
>gi|390608551|dbj|BAM21252.1| RRM-containing protein [Ephydatia fluviatilis]
Length = 431
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLN 78
IF LS + + L E+F+ G+V + ++ TRR +G +I FKDP SV + +
Sbjct: 52 IFVGGLSWQTSSEKLAEYFARFGEVLECNIMRDPSTRRSRGFGFITFKDPASVSKVLETH 111
Query: 79 GQKLLGI------PIIVQPTQAEKNRAGNTL---PNLQPRGTGGPMRLYIGSLHFNITED 129
Q+ + + P I P + R GN + P P T R+++G L + TE
Sbjct: 112 AQEPIVLDDKNIDPKIAVPPK----RPGNKVMSPPWTAPSQT---KRIFVGGLSSDSTEM 164
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKK 171
L+ F+ FG I ++QLM D +T R +G+GF+TF S A+K
Sbjct: 165 DLQEYFQEFGTIQDVQLMYDRNTSRHRGFGFVTFDSEKPAEK 206
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%)
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
G T P T P ++++G L + + + L F FG++ +M DP T RS+G+G
Sbjct: 35 GATSPTTPNGDTSKPTKIFVGGLSWQTSSEKLAEYFARFGEVLECNIMRDPSTRRSRGFG 94
Query: 160 FITFHSADDAKKAQE 174
FITF K E
Sbjct: 95 FITFKDPASVSKVLE 109
>gi|389633057|ref|XP_003714181.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|351646514|gb|EHA54374.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|440473688|gb|ELQ42470.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae Y34]
gi|440486239|gb|ELQ66126.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae P131]
Length = 486
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 14/193 (7%)
Query: 12 EERDA-RTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPES 70
EE D T+F LS + L E F G V R+IT ++ R KG Y++F PE
Sbjct: 233 EESDKPSTLFVGNLSWNVDDAMLAEEFKFCGTVTSARVITDRESGRSKGFGYVDFATPEE 292
Query: 71 VPLAMG------LNGQKL---LGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGS 121
A G ++G+++ A RA + P L++G+
Sbjct: 293 AEKAHGEKQGAFIDGREIKVDFSTGKATNSNDAAGARAKKYGDTVSPESD----TLFVGN 348
Query: 122 LHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFEL 181
L F+ ED + F ++ +++L + ++GR KG+G++TF+S +DAK A EQLNG +
Sbjct: 349 LPFDADEDSVGAFFSEVAEVKSLRLPTEQESGRRKGFGYVTFNSVEDAKSAFEQLNGQSI 408
Query: 182 AGRPMKVGTVTDR 194
GR ++ T R
Sbjct: 409 NGRNCRLDYSTPR 421
>gi|47086779|ref|NP_997793.1| cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
gi|28279551|gb|AAH45368.1| Cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
Length = 386
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
++ +T++ LS+ + + + F +G + ++I T ++EF +
Sbjct: 3 DDEQPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIV--DTAGNDPYCFVEFFEHRHA 60
Query: 72 PLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
++ +NG+K++G + V N A T P+ Q + T +++G L IT D
Sbjct: 61 AASLAAMNGRKIMGKEVKV-------NWA--TSPSSQKKDTSNHFHVFVGDLSPEITTDD 111
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
+R F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++
Sbjct: 112 IRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 171
Query: 191 VTDR 194
T +
Sbjct: 172 ATRK 175
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D+ F+ G++ D R++ T + KG ++ F D E+ M
Sbjct: 98 VFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 157
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + NT + + + +Y G + +TE
Sbjct: 158 GGQWLGGRQIRTNWATRKPPAPKATYETNTKHLSFDEVVNQSSPSNCTVYCGGVTTGLTE 217
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I +++ V PD KGY F+ F+S + A A +NG L G +K
Sbjct: 218 QLMRQTFSPFGQI--MEVRVFPD----KGYSFVRFNSHESAAHAIVSVNGTSLEGHIVK 270
>gi|1015370|gb|AAA79045.1| 24 kDa RNA binding protein, partial [Spinacia oleracea]
Length = 220
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 15/190 (7%)
Query: 2 RPAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIA 61
+P +S DL IF L + + +L F + G V V +I T R +G
Sbjct: 31 QPNFSPDLK--------IFVGNLPFNVDSAELAGLFGAAGTVEMVEVIYDKLTGRSRGFG 82
Query: 62 YIEFKDPESV-PLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPR--GTGGPMRLY 118
++ E V A N +L G + V E + TLP ++ G R++
Sbjct: 83 FVTMSSVEEVEAAAQQFNNYELDGRTLRV----TEDSHKDMTLPRVESECDSFGSSNRVH 138
Query: 119 IGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
+G+L + + +D L+ +F G + +++ D DTGRS+G+GF+T++SA++ A E L+G
Sbjct: 139 VGNLSWKVDDDALKTLFSETGDVVEAKVIYDRDTGRSRGFGFVTYNSANEVNTAIESLDG 198
Query: 179 FELAGRPMKV 188
+L GR ++V
Sbjct: 199 VDLNGRSIRV 208
>gi|315046452|ref|XP_003172601.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
gi|311342987|gb|EFR02190.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
Length = 481
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-- 76
+F LS + L F G++ R++T ++ R +G Y+EF + E A
Sbjct: 240 LFAGNLSWNVDEEWLRSEFEEFGELVGTRIVTDRESGRSRGFGYVEFANVEDAVKAHAAK 299
Query: 77 ----LNGQKL------LGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
L+G+KL P + NRA + P L+IG++ F+
Sbjct: 300 KDVELDGRKLNLDFANARANGNANPRERADNRAKSFGDQTSPESD----TLFIGNISFSA 355
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
E M++ +F +G I I+L DP++GR KG+G++ F S D+A+ A E +G +L GR +
Sbjct: 356 DESMVQELFSKYGSIQGIRLPTDPESGRPKGFGYVQFSSVDEARAAMEAEHGADLGGRSI 415
Query: 187 KVGTVT 192
++ T
Sbjct: 416 RLDYST 421
>gi|167383625|ref|XP_001736605.1| cold-inducible RNA-binding protein [Entamoeba dispar SAW760]
gi|165900936|gb|EDR27150.1| cold-inducible RNA-binding protein, putative [Entamoeba dispar
SAW760]
Length = 138
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
RLYIGSL +++T++ LR FE FG + + +++ D ++ RSKG+GF+TF +DAKKA E+
Sbjct: 3 RLYIGSLAYSVTDESLRAAFEKFGTVTDCKVVTDRESQRSKGFGFVTFEKDEDAKKAIEE 62
Query: 176 LNGFELAGRPMKVGTVTDRNE 196
+N EL GR +KV R E
Sbjct: 63 MNEQELEGRRIKVDVSKPREE 83
>gi|406602740|emb|CCH45698.1| Nuclear localization sequence-binding protein [Wickerhamomyces
ciferrii]
Length = 467
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 94/191 (49%), Gaps = 8/191 (4%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
T+F +LS I L+ F +G V R+I T + +G Y++F + A+
Sbjct: 236 TLFVGRLSWSIDDEWLKREFEPLGGVISARVIFERATGKSRGYGYVDFDSKSAAEKALKE 295
Query: 77 LNGQKLLGIPIIVQPT----QAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
G+++ G PI + + A NR+ + + L++G+L FN D L
Sbjct: 296 YQGREIDGRPINLDMSTGKPHASNNRSNDRASKFGDTPSAPSDTLFLGNLSFNANRDNLS 355
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
+F +G I ++++ PDT + KG+G++ + S D+AK A E LNG + GRP+++
Sbjct: 356 EVFSEYGSIVSVRIPTHPDTEQPKGFGYVQYGSVDEAKAALEALNGEYIEGRPVRLDFSA 415
Query: 193 DR---NESVGG 200
R N S GG
Sbjct: 416 PRDNSNRSFGG 426
>gi|328704296|ref|XP_001948399.2| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Acyrthosiphon pisum]
Length = 572
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
++ +S ++ +++ FS G ++ + + TR+ KG A++E++ PE+ LA+ +
Sbjct: 109 VYVGNISFELKEDSIKQAFSPFGFIKSIDMSWDPITRKHKGYAFVEYEIPEAAQLALEHM 168
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG G I V + +A + + + +Y+ S+H N+TED ++ +FE
Sbjct: 169 NGVVFGGRNIKVVGRPSNMPQAQSVIDEIWEEAKQYYNFVYVASIHLNLTEDDIKCVFEA 228
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FG I L + R +GYGFI + A +A +N F+L GR ++VG
Sbjct: 229 FGPIRTCTLAKSRTSNRHRGYGFIEYEGHQAAIEAISSMNLFDLGGRSLRVG 280
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+G++ F + ED ++ F PFG I +I + DP T + KGY F+ + + A+ A E
Sbjct: 108 RVYVGNISFELKEDSIKQAFSPFGFIKSIDMSWDPITRKHKGYAFVEYEIPEAAQLALEH 167
Query: 176 LNGFELAGRPMKV 188
+NG GR +KV
Sbjct: 168 MNGVVFGGRNIKV 180
>gi|340914665|gb|EGS18006.1| hypothetical protein CTHT_0060190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 539
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
T++ L + + L E F + + R++T +RR +G Y++F P++ A
Sbjct: 306 TLWVGNLGWAVDDKALYEEFENCEGIVSARVVTDKDSRRSRGFGYVDFTSPDAAEKAYNE 365
Query: 77 LNGQKLLGIPIIVQ----------PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
NG L G + + PT RA + P L++G+L FN
Sbjct: 366 KNGAHLQGREMRLDFASKPAEGNDPTTRAAERARKHGDVISPESD----TLFVGNLSFNA 421
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE+ + F + ++++ D ++GR KG+ ++TF+S +DAK A QLNG L GRP+
Sbjct: 422 TEESVSEFFNSVAAVQSLRIPTDQESGRPKGFAYVTFNSVEDAKTAFNQLNGSNLDGRPV 481
Query: 187 KV 188
++
Sbjct: 482 RL 483
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 5 YSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIE 64
+ D +SPE + T+F LS + EFF+SV V+ +R+ T ++ R KG AY+
Sbjct: 401 HGDVISPE---SDTLFVGNLSFNATEESVSEFFNSVAAVQSLRIPTDQESGRPKGFAYVT 457
Query: 65 FKDPESVPLAMG-LNGQKLLGIPI 87
F E A LNG L G P+
Sbjct: 458 FNSVEDAKTAFNQLNGSNLDGRPV 481
>gi|121705054|ref|XP_001270790.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
gi|119398936|gb|EAW09364.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
Length = 514
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 11/203 (5%)
Query: 3 PAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY 62
P S E + +F LS + L + F + G++ VR++T + R +G Y
Sbjct: 246 PKKSKQAEEETGASANLFIGNLSWNVDEDWLRQEFETFGELSGVRIVTDRDSGRSRGFGY 305
Query: 63 IEF------KDPESVPLAMGLNGQKL-----LGIPIIVQPTQAEKNRAGNTLPNLQPRGT 111
+E+ L+G+K+ G P Q ++RA + + +
Sbjct: 306 VEYVSAADAAKAYKAKKDTELDGRKINLDYATGRPANNQQGGGFQDRAQARARSFGDQSS 365
Query: 112 GGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKK 171
L++G+L F+ ED ++ +F G I I+L DPD+GR KG+G++ F S D+A++
Sbjct: 366 PESDTLFVGNLPFSANEDSVQELFGEKGSIVGIRLPTDPDSGRPKGFGYVQFASVDEARE 425
Query: 172 AQEQLNGFELAGRPMKVGTVTDR 194
A LNG EL GRP+++ T R
Sbjct: 426 AFNSLNGAELDGRPVRLDFSTPR 448
>gi|126273035|ref|XP_001367894.1| PREDICTED: nucleolysin TIAR isoform 2 [Monodelphis domestica]
Length = 371
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 17/189 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRR-FKGIAYIEF 65
DD P RT++ LS+ + + + FS +G + ++IT + + + + + E
Sbjct: 3 DDGQP-----RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEH 57
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
+D + AM NG+K+LG + V N A T P+ Q + T +++G L
Sbjct: 58 RDAAAALAAM--NGRKILGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPE 106
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
IT + ++ F PFGKI + +++ D TG+SKGYGF++F++ DA+ A + G L GR
Sbjct: 107 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 166
Query: 186 MKVGTVTDR 194
++ T +
Sbjct: 167 IRTNWATRK 175
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 28/185 (15%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F LS I T D++ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 98 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 157
Query: 76 GLNGQKLLG-------------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSL 122
G GQ L G P Q ++ R + + P+ +Y G +
Sbjct: 158 G--GQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNC----TVYCGGI 211
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
+T+ ++R F PFG+I +++ V P+ KGY F+ F + + A A +NG +
Sbjct: 212 ASGLTDQLMRQTFSPFGQI--MEIRVFPE----KGYSFVRFSTHESAAHAIVSVNGTTIE 265
Query: 183 GRPMK 187
G +K
Sbjct: 266 GHVVK 270
>gi|242048706|ref|XP_002462099.1| hypothetical protein SORBIDRAFT_02g018650 [Sorghum bicolor]
gi|241925476|gb|EER98620.1| hypothetical protein SORBIDRAFT_02g018650 [Sorghum bicolor]
Length = 242
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 1/180 (0%)
Query: 10 SPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPE 69
+PE AR ++ + + + +L + F++ G V ++ T R + ++ E
Sbjct: 60 APEVVAARKLYVGNVPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTVE 119
Query: 70 SVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
A+ LNG ++ G I V T++ + P +P ++Y+G+L N+T
Sbjct: 120 EANAAVEALNGTEVGGRKIKVNVTESFLPNIDRSAPESEPVFVDSQYKVYVGNLAKNVTT 179
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
++L+ F GKI + + P T +SKGYGF+TF S ++ + A N EL G+P++V
Sbjct: 180 EVLKNFFSEKGKILSATVSHIPGTSKSKGYGFVTFSSEEEVEAAVATFNNAELEGQPIRV 239
>gi|291401234|ref|XP_002716993.1| PREDICTED: poly(A) binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 370
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 15/166 (9%)
Query: 33 LEEFFSSVGKVRDVRLIT--CNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIV 89
L E FS+ G++ V+++T C K+R G ++ F E+ A+ +NG+++ G PI V
Sbjct: 206 LREVFSTYGRILSVKVMTNSCGKSR---GFGFVSFDSHEAARKAVEEMNGKEVNGQPIFV 262
Query: 90 QPTQ------AEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDN 143
Q AE + L + RG G +LYI +L NI ++ LR F FG I
Sbjct: 263 GRAQKKVERQAELKQMFEQLKKERIRGCQGA-KLYIKNLDENIDDEKLRKEFSSFGSISR 321
Query: 144 IQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
+++M + G+SKG+G I F S++DA +A +NG L +P+ +
Sbjct: 322 VKVM--QEEGQSKGFGLICFSSSEDAARAMTVMNGRILGSKPLNIA 365
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 126/269 (46%), Gaps = 39/269 (14%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
+F L + I + L E FS+ GK+ ++++ + R KG A++ F+ + A+
Sbjct: 99 NVFIKNLDKSIDNKSLYECFSAFGKILSSKVMSDD--RGSKGYAFVHFQSQSAADRAIEE 156
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
+NG+ L + V ++ K+R L N T +YI + ++ ++ LR +F
Sbjct: 157 MNGKFLKDCKVFVGRFKSRKDREAE-LRNKASEFTN----VYIKNFGDDMDDERLREVFS 211
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
+G+I ++++M + G+S+G+GF++F S + A+KA E++NG E+ G+P+ VG + E
Sbjct: 212 TYGRILSVKVMTNS-CGKSRGFGFVSFDSHEAARKAVEEMNGKEVNGQPIFVGRAQKKVE 270
Query: 197 S-------------------------VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAE 231
+ N+D +++ + G+ R+++M + +
Sbjct: 271 RQAELKQMFEQLKKERIRGCQGAKLYIKNLDENIDDEKLRKEFSSFGSISRVKVMQEEGQ 330
Query: 232 GTGLEL-----PPAAASALNLAQNAILNS 255
G L AA A+ + IL S
Sbjct: 331 SKGFGLICFSSSEDAARAMTVMNGRILGS 359
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 37 FSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQPTQAE 95
FS VG V +R+ TRR G AY+ F A+ +N + G I + +Q +
Sbjct: 30 FSRVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDTMNFDVVKGKAIRLMWSQRD 89
Query: 96 KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS 155
L+ G G ++I +L +I L F FGKI + ++M D D G S
Sbjct: 90 --------AYLRKSGIGN---VFIKNLDKSIDNKSLYECFSAFGKILSSKVMSD-DRG-S 136
Query: 156 KGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
KGY F+ F S A +A E++NG L + VG R +
Sbjct: 137 KGYAFVHFQSQSAADRAIEEMNGKFLKDCKVFVGRFKSRKD 177
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G LH ++TED+L F G + +I++ D T RS GY ++ F DA+KA + +
Sbjct: 12 LYVGDLHSDVTEDLLFKKFSRVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDTM 71
Query: 177 NGFELAGRPMKV 188
N + G+ +++
Sbjct: 72 NFDVVKGKAIRL 83
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 90/178 (50%), Gaps = 15/178 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
IF +LS + L+ F + G+V + +T R KG Y+ F PE+ A+ +
Sbjct: 393 IFVGKLSWNVDDEWLKSEFEACGEVVRASVQMDRQTGRSKGFGYVSFSTPEAAEKAIAEM 452
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRG-------TGGPMRLYIGSLHFNITEDM 130
NG+++ G + V N A PN R + L++G++ FN EDM
Sbjct: 453 NGKEIDGRAVNV-------NAATPKTPNPAGRAKQFGDTVSAESKVLFVGNVSFNANEDM 505
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
L F G I +++L D +TG+ KG+G++ F S ++AK A LNG ++AGR +++
Sbjct: 506 LWETFGEHGDIVSVRLPTDRETGQMKGFGYVEFTSVENAKSAFNALNGKDIAGRNIRL 563
>gi|268564468|ref|XP_002639117.1| C. briggsae CBR-RNP-6 protein [Caenorhabditis briggsae]
Length = 744
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 9/179 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
I+ +S IR L + F G ++ + + T K A++E++ PE+ LA +
Sbjct: 104 IYVGSISFEIREDMLRKAFDPFGPIKSINMSWDPATGHHKTFAFVEYEIPEAALLAQESM 163
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQP------RGTGGPMRLYIGSLHFNITEDML 131
NGQ L G + V ++ R +P QP + R+Y+ S+H +++E L
Sbjct: 164 NGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVASVHPDLSESEL 223
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRS-KGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
G+FE FG+I QL P TGR +G+G+I F++ + +A +N F+L G+ ++VG
Sbjct: 224 AGVFEAFGQIIKCQLARTP-TGRGHRGFGYIEFNNMNSQNEAIAGMNMFDLGGQYLRVG 281
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F I EDMLR F+PFG I +I + DP TG K + F+ + + A AQE
Sbjct: 103 RIYVGSISFEIREDMLRKAFDPFGPIKSINMSWDPATGHHKTFAFVEYEIPEAALLAQES 162
Query: 176 LNGFELAGRPMKVGTV 191
+NG L GR +KV ++
Sbjct: 163 MNGQMLGGRNLKVNSM 178
>gi|4507499|ref|NP_003243.1| nucleolysin TIAR isoform 1 [Homo sapiens]
gi|194205608|ref|XP_001492932.2| PREDICTED: nucleolysin TIAR isoform 2 [Equus caballus]
gi|311271909|ref|XP_001928970.2| PREDICTED: nucleolysin TIAR isoform 1 [Sus scrofa]
gi|332835148|ref|XP_001154534.2| PREDICTED: nucleolysin TIAR isoform 2 [Pan troglodytes]
gi|345792875|ref|XP_865423.2| PREDICTED: nucleolysin TIAR isoform 18 [Canis lupus familiaris]
gi|390473245|ref|XP_002756491.2| PREDICTED: nucleolysin TIAR isoform 1 [Callithrix jacchus]
gi|395827975|ref|XP_003787163.1| PREDICTED: nucleolysin TIAR isoform 2 [Otolemur garnettii]
gi|397510637|ref|XP_003825699.1| PREDICTED: nucleolysin TIAR isoform 1 [Pan paniscus]
gi|402881650|ref|XP_003904379.1| PREDICTED: nucleolysin TIAR isoform 1 [Papio anubis]
gi|403259379|ref|XP_003922194.1| PREDICTED: nucleolysin TIAR [Saimiri boliviensis boliviensis]
gi|426253184|ref|XP_004020280.1| PREDICTED: nucleolysin TIAR isoform 1 [Ovis aries]
gi|426366372|ref|XP_004050232.1| PREDICTED: nucleolysin TIAR isoform 1 [Gorilla gorilla gorilla]
gi|267131|sp|Q01085.1|TIAR_HUMAN RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|189310|gb|AAA36384.1| nucleolysin TIAR [Homo sapiens]
gi|158254826|dbj|BAF83384.1| unnamed protein product [Homo sapiens]
gi|261858270|dbj|BAI45657.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[synthetic construct]
gi|380783711|gb|AFE63731.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|383408329|gb|AFH27378.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|384942770|gb|AFI34990.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|410218474|gb|JAA06456.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257382|gb|JAA16658.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296996|gb|JAA27098.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 375
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 17/189 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRR-FKGIAYIEF 65
DD P RT++ LS+ + + + FS +G + ++IT + + + + + E
Sbjct: 4 DDGQP-----RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEH 58
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
+D + AM NG+K+LG + V N A T P+ Q + T +++G L
Sbjct: 59 RDAAAALAAM--NGRKILGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPE 107
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
IT + ++ F PFGKI + +++ D TG+SKGYGF++F++ DA+ A + G L GR
Sbjct: 108 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 167
Query: 186 MKVGTVTDR 194
++ T +
Sbjct: 168 IRTNWATRK 176
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F LS I T D++ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + + NT ++ + + +Y G + +T+
Sbjct: 159 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 218
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I +++ V P+ KGY F+ F + + A A +NG + G +K
Sbjct: 219 QLMRQTFSPFGQI--MEIRVFPE----KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 271
>gi|225560173|gb|EEH08455.1| ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 470
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 6/176 (3%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-- 76
+F LS + L F G++ VR++T + R +G Y+EF + A
Sbjct: 231 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAK 290
Query: 77 ----LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
L+G+KL + A K RA + N + + L+IG++ F+ E+M+
Sbjct: 291 KDAELDGRKLNVDFANGRSNAAPKERAQSRAQNFGDQTSPESDTLFIGNIAFSANENMIS 350
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
F G I ++L DP++GR KG+G++ F S D+A+ A + LNG +L GR M++
Sbjct: 351 EAFAEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQALNGADLGGRSMRL 406
>gi|54303906|gb|AAV33303.1| aging-associated gene 7 protein [Homo sapiens]
Length = 374
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 17/189 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRR-FKGIAYIEF 65
DD P RT++ LS+ + + + FS +G + ++IT + + + + + E
Sbjct: 4 DDGQP-----RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEH 58
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
+D + AM NG+K+LG + V N A T P+ Q + T +++G L
Sbjct: 59 RDAAAALAAM--NGRKILGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPE 107
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
IT + ++ F PFGKI + +++ D TG+SKGYGF++F++ DA+ A + G L GR
Sbjct: 108 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 167
Query: 186 MKVGTVTDR 194
++ T +
Sbjct: 168 IRTNWATRK 176
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F LS I T D++ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + + NT ++ + + +Y G + +T+
Sbjct: 159 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 218
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I +++ V P+ KGY F+ F + + A A +NG + G +K
Sbjct: 219 QLMRQTFSPFGQI--MEIRVFPE----KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 271
>gi|154288132|ref|XP_001544861.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408502|gb|EDN04043.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 500
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 6/176 (3%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-- 76
+F LS + L F G++ VR++T + R +G Y+EF + A
Sbjct: 261 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAK 320
Query: 77 ----LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
L+G+KL + A K RA + N + + L+IG++ F+ E+M+
Sbjct: 321 KDAELDGRKLNVDFANGRSNAAPKERAQSRAQNFGDQTSPESDTLFIGNIAFSANENMIS 380
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
F G I ++L DP++GR KG+G++ F S D+A+ A + LNG +L GR M++
Sbjct: 381 EAFAEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQALNGADLGGRSMRL 436
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 12/187 (6%)
Query: 17 RTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM- 75
++IF +LS + L+ F+ G+V R+ +T + KG Y+EF D S A+
Sbjct: 272 KSIFVGRLSWNVDDEWLKTEFAEAGEVVSARVQMDRQTGKSKGFGYVEFADAASAKKAVE 331
Query: 76 GLNGQKLLGIPIIVQ------PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITED 129
+NG+++ G P+ + P E+ +P T L++G+L F+ T+D
Sbjct: 332 TMNGREIDGRPVNLDLATPRGPPNPERRAKAFGDSRSEPSAT-----LFVGNLAFSATQD 386
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
+ +F G++ N++L D D+G+ KG+G++ F + A KA +L G + GR +++
Sbjct: 387 AVYELFGAVGEVVNVRLPTDRDSGQPKGFGYVEFADVETASKALNELGGTDFEGRNIRLD 446
Query: 190 TVTDRNE 196
R E
Sbjct: 447 FSAPRTE 453
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 91/186 (48%), Gaps = 5/186 (2%)
Query: 17 RTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG 76
+ +F LS I L F G++ R+IT +T R KG Y+EF A
Sbjct: 234 KNLFVGNLSWNIDEDWLRREFEGFGEIVGCRIITDRETGRGKGFGYVEFATSADAAKAQA 293
Query: 77 -LNGQKLLGIPIIVQ-PTQAEKNRAGNTLPNLQPRG---TGGPMRLYIGSLHFNITEDML 131
++ +L G P+ V T +K AG T G + L++G+L F+ T D +
Sbjct: 294 EMHQYELDGRPLNVDFSTPRQKPDAGKTNDRANKYGDKRSAPSNTLFLGNLSFDCTNDSI 353
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTV 191
+ IF +G I + L D DTG KG+G++ F S ++A A + LNG ++AGR +++
Sbjct: 354 QEIFAEYGNITRVSLPTDRDTGSIKGFGYVDFGSQEEATAALDALNGQDIAGRNIRIDYA 413
Query: 192 TDRNES 197
R ++
Sbjct: 414 APREDN 419
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 60/94 (63%)
Query: 107 QPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSA 166
+P G G L++G+L +NI ED LR FE FG+I +++ D +TGR KG+G++ F ++
Sbjct: 226 EPAGAEGIKNLFVGNLSWNIDEDWLRREFEGFGEIVGCRIITDRETGRGKGFGYVEFATS 285
Query: 167 DDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGG 200
DA KAQ +++ +EL GRP+ V T R + G
Sbjct: 286 ADAAKAQAEMHQYELDGRPLNVDFSTPRQKPDAG 319
>gi|426198367|gb|EKV48293.1| hypothetical protein AGABI2DRAFT_142473 [Agaricus bisporus var.
bisporus H97]
Length = 559
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 11/186 (5%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L P + +IF QLS + L + FS G+V + T R +G Y+ F
Sbjct: 300 LDPATPETLSIFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRSRGFGYVHFSTA 359
Query: 69 ESVPLAMGLNGQKLLGIPIIV------QPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSL 122
++V A+ +NG ++ G I V Q + RA + P + L+IG+L
Sbjct: 360 DAVEKALKMNGYEIDGRAIKVDLSTPPNSNQIRERRAKVFNDEISPPSS----TLFIGNL 415
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
F+ITED L F+ + I+L D +TG+ KG+G++ + +DAKKA E ++G E+
Sbjct: 416 PFSITEDGLWSYFDGHS-VKTIRLPTDRETGQLKGFGYVELENVEDAKKAFEAISGQEIE 474
Query: 183 GRPMKV 188
GR ++V
Sbjct: 475 GRRVRV 480
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 115 MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQE 174
+ +++G L +++ D L F G++ + + +D +TGRS+G+G++ F +AD +KA
Sbjct: 308 LSIFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRSRGFGYVHFSTADAVEKAL- 366
Query: 175 QLNGFELAGRPMKVGTVTDRN 195
++NG+E+ GR +KV T N
Sbjct: 367 KMNGYEIDGRAIKVDLSTPPN 387
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
E+ RT++ LS+ + + + F+ +G + ++I T ++EF D
Sbjct: 2 EDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIV--DTAGNDPYCFVEFYDHRHA 59
Query: 72 PLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
++ +NG+K++G + V N A T P Q + T +++G L IT +
Sbjct: 60 AASLAAMNGRKIMGKEVKV-------NWA--TTPTSQKKDTSNHFHVFVGDLSPEITTED 110
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A + + G L GR ++
Sbjct: 111 VKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNW 170
Query: 191 VTDR 194
T +
Sbjct: 171 ATRK 174
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F+ G++ D R++ T + KG ++ F D E+ M
Sbjct: 97 VFVGDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHM 156
Query: 76 G---LNGQKLLGIPIIVQP----TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P T E N + + + + +Y G + +TE
Sbjct: 157 GGQWLGGRQIRTNWATRKPPAPKTTYESNSKHLSFEEVMSQSSPSNCTVYCGGVSSGLTE 216
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F FG+I +++ V PD KGY F+ F+S + A A +NG + G +K
Sbjct: 217 QLMRQTFSAFGQI--MEVRVFPD----KGYSFVRFNSHESAAHAIVSVNGTSIDGHVVK 269
>gi|240278920|gb|EER42426.1| ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325090181|gb|EGC43491.1| ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 472
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 6/185 (3%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-- 76
+F LS + L F G++ VR++T + R +G Y+EF + A
Sbjct: 233 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAK 292
Query: 77 ----LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
L+G+KL + A K RA + N + + L+IG++ F+ E+M+
Sbjct: 293 KDAELDGRKLNVDFANGRSNAAPKERAQSRAQNFGDQTSPESDTLFIGNIAFSANENMIS 352
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
F G I ++L DP++GR KG+G++ F S D+A+ A + LNG +L GR M++ +
Sbjct: 353 EAFAEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQALNGADLGGRSMRLDFSS 412
Query: 193 DRNES 197
R S
Sbjct: 413 PRQNS 417
>gi|14714709|gb|AAH10496.1| Tial1 protein [Mus musculus]
gi|148685700|gb|EDL17647.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Mus musculus]
gi|149067624|gb|EDM17176.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_d [Rattus norvegicus]
Length = 375
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 17/189 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRR-FKGIAYIEF 65
DD P RT++ LS+ + + + FS +G + ++IT + + + + + E
Sbjct: 4 DDGQP-----RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEH 58
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
+D + AM NG+K+LG + V N A T P+ Q + T +++G L
Sbjct: 59 RDAAAALAAM--NGRKILGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPE 107
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
IT + ++ F PFGKI + +++ D TG+SKGYGF++F++ DA+ A + G L GR
Sbjct: 108 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 167
Query: 186 MKVGTVTDR 194
++ T +
Sbjct: 168 IRTNWATRK 176
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F LS I T D++ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158
Query: 76 GLNGQKLLG-------------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSL 122
G GQ L G P Q T ++ R + + P+ +Y G +
Sbjct: 159 G--GQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNC----TVYCGGI 212
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
+T+ ++R F PFG+I +++ V P+ KGY F+ F + + A A +NG +
Sbjct: 213 ASGLTDQLMRQTFSPFGQI--MEIRVFPE----KGYSFVRFSTHESAAHAIVSVNGTTIE 266
Query: 183 GRPMK 187
G +K
Sbjct: 267 GHVVK 271
>gi|303272375|ref|XP_003055549.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463523|gb|EEH60801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 606
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 14/192 (7%)
Query: 16 ARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM 75
A +++C L L E FS++G V +R+ TRR G AY+ F+ A+
Sbjct: 31 ATSLYCGDLDPSCTEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFQQGNDAARAI 90
Query: 76 -GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGI 134
LN Q + G PI + +Q + P L+ G G ++I +L I L
Sbjct: 91 DALNFQVVNGKPIRIMYSQRD--------PALRKSGVG---NIFIKNLDKEIDNKALYDT 139
Query: 135 FEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDR 194
F FG I + ++ D G+SKGYGF+ F + + A+ A E++NG L + + VG R
Sbjct: 140 FAQFGNIVSAKVATDLQ-GQSKGYGFVQFDTEEGAQSAIEKVNGMLLNDKQVYVGPFQKR 198
Query: 195 NESVGGGPSNLD 206
NE GGGP+ +
Sbjct: 199 NER-GGGPTTFN 209
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
IF L + I + L + F+ G + ++ T + + KG +++F E A+ +
Sbjct: 122 IFIKNLDKEIDNKALYDTFAQFGNIVSAKVAT-DLQGQSKGYGFVQFDTEEGAQSAIEKV 180
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM---RLYIGSLHFNITEDMLRGI 134
NG L + V P Q R G GP +Y+ +LH ++TE+ LR +
Sbjct: 181 NGMLLNDKQVYVGPFQKRNERGG------------GPTTFNNVYVKNLHESVTEEKLREV 228
Query: 135 FEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFE 180
FE FG + ++ +M D + G+SKG+GF+ + A+ A K+ E+L+G++
Sbjct: 229 FEKFGALTSVVVMKDAE-GKSKGFGFVCYEDAEAAGKSVEELDGYD 273
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 9/177 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
++ L + + L E F G + V ++ + + KG ++ ++D E+ ++ L
Sbjct: 211 VYVKNLHESVTEEKLREVFEKFGALTSV-VVMKDAEGKSKGFGFVCYEDAEAAGKSVEEL 269
Query: 78 NG-QKLLGIPIIVQPTQAEKNRAGNTLPNL--QPRGTGGPM---RLYIGSLHFNITEDML 131
+G K+ +V Q + R + R M LYI +L + + L
Sbjct: 270 DGYDKIEDKAWVVCRAQKKSEREAELKAKFDAERRERMEKMAGANLYIKNLEDTVDDAKL 329
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
R +F FG I + ++M D G S+G F+ F SAD+A +A ++NG +P+ V
Sbjct: 330 RELFAEFGTITSCRVMRD-TAGASRGSAFVAFSSADEATRAVTEMNGKMAGQKPLYV 385
>gi|348503274|ref|XP_003439190.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oreochromis
niloticus]
Length = 526
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 77 FGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 136
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E+ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 137 MKHKGFAFVEYDVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 194
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FG+I + L DP TGR +G+G
Sbjct: 195 YN--------------RIYVASVHPDLSDDDIKSVFEAFGRIKSCTLARDPTTGRHRGFG 240
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A A +N F+L G+ ++VG
Sbjct: 241 FIEYEKPQSALDAVSSMNLFDLGGQYLRVG 270
>gi|409079870|gb|EKM80231.1| hypothetical protein AGABI1DRAFT_73218 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 568
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 11/186 (5%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L P + +IF QLS + L + FS G+V + T R +G Y+ F
Sbjct: 300 LDPATPETLSIFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRSRGFGYVHFSTA 359
Query: 69 ESVPLAMGLNGQKLLGIPIIV------QPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSL 122
++V A+ +NG ++ G I V Q + RA + P + L+IG+L
Sbjct: 360 DAVEKALKMNGYEIDGRAIKVDLSTPPNSNQIRERRAKVFNDEISPPSS----TLFIGNL 415
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
F+ITED L F+ + I+L D +TG+ KG+G++ + +DAKKA E ++G E+
Sbjct: 416 PFSITEDGLWSYFDGHS-VKTIRLPTDRETGQLKGFGYVELENVEDAKKAFEAISGQEIE 474
Query: 183 GRPMKV 188
GR ++V
Sbjct: 475 GRRVRV 480
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 115 MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQE 174
+ +++G L +++ D L F G++ + + +D +TGRS+G+G++ F +AD +KA
Sbjct: 308 LSIFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRSRGFGYVHFSTADAVEKAL- 366
Query: 175 QLNGFELAGRPMKVGTVTDRN 195
++NG+E+ GR +KV T N
Sbjct: 367 KMNGYEIDGRAIKVDLSTPPN 387
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 2/187 (1%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E + +F LS I L F S G++ R+IT +T R KG Y+EF
Sbjct: 231 EDGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKAADAA 290
Query: 73 LAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR-LYIGSLHFNITEDM 130
A ++ +L G P+ V + + N N P L+IG+L F+ T +
Sbjct: 291 KAQKDMHEYELDGRPLNVDFSTPRQKPDANARANKFGDKRSAPSNTLFIGNLSFDCTNET 350
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ +F +G + + L D D+G KG+G++ F S ++A A E L+G ++AGRP++V
Sbjct: 351 IQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATAALEALHGQDVAGRPLRVDF 410
Query: 191 VTDRNES 197
R+++
Sbjct: 411 AAPRDDN 417
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 58/90 (64%)
Query: 107 QPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSA 166
+P G L++G+L +NI ED LR FE FG+I +++ D +TGR+KG+G++ F A
Sbjct: 227 EPVAEDGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKA 286
Query: 167 DDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
DA KAQ+ ++ +EL GRP+ V T R +
Sbjct: 287 ADAAKAQKDMHEYELDGRPLNVDFSTPRQK 316
>gi|341895702|gb|EGT51637.1| CBN-RNP-6 protein [Caenorhabditis brenneri]
Length = 757
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 91/179 (50%), Gaps = 9/179 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
I+ +S IR L + F G ++ + + T K A++E++ PE+ LA +
Sbjct: 104 IYVGSISFEIREDMLRKAFDPFGPIKSINMSWDPATGHHKTFAFVEYEIPEAALLAQESM 163
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQP------RGTGGPMRLYIGSLHFNITEDML 131
NGQ L G + V ++ R +P QP + R+Y+ S+H +++E L
Sbjct: 164 NGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVASVHPDLSESEL 223
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRS-KGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
G+FE FG+I QL P TGR +G+G+I F++ +A +N F+L G+ ++VG
Sbjct: 224 AGVFEAFGQIIKCQLARTP-TGRGHRGFGYIEFNNVTSQNEAIAGMNMFDLGGQYLRVG 281
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F I EDMLR F+PFG I +I + DP TG K + F+ + + A AQE
Sbjct: 103 RIYVGSISFEIREDMLRKAFDPFGPIKSINMSWDPATGHHKTFAFVEYEIPEAALLAQES 162
Query: 176 LNGFELAGRPMKVGTV 191
+NG L GR +KV ++
Sbjct: 163 MNGQMLGGRNLKVNSM 178
>gi|281209343|gb|EFA83511.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 1109
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 101 NTLPNLQPRGTGGP----MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSK 156
+T P P+ P R+YIG++HFN+TE L IF PFG I ++ L DP TG+SK
Sbjct: 667 STTPTTHPKQQQTPEQAQSRIYIGNIHFNLTETDLTSIFSPFGPIKSLSLSKDPATGKSK 726
Query: 157 GYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
GY FI + + A A +N LAGR +KVG
Sbjct: 727 GYCFIEYSYPEAANNAISHMNHQSLAGRQIKVG 759
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 21/163 (12%)
Query: 85 IPIIVQP--TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKID 142
+P+I P T + + + LP P + R+Y+GS+ +N+ ED ++ IF G +
Sbjct: 843 VPLITIPAVTSQQLQQPTSILPKQDPMASEN--RIYVGSIPWNVNEDQIKVIFSSIGNVV 900
Query: 143 NIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG------TVTDRNE 196
+ LM + ++GR KG+GFI + ++ A+ A LNG+++ GR +KVG +++ NE
Sbjct: 901 SCSLMPNLESGRHKGFGFIDYDNSKSAEDAIATLNGYDIGGRQLKVGRPIKNASISSSNE 960
Query: 197 SVGGGP----------SNLDTDEMERAGVDLGATGRLQLMFKL 229
S P S++ TD +E V L R+ L KL
Sbjct: 961 SKQTTPLSTPMVPTLSSSVGTDSIED-DVTLSTEQRILLTQKL 1002
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 3 PAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY 62
PA E ++ T+F +LS + L + F G V R+ + + +G AY
Sbjct: 96 PAKKAKTDTEAGESNTVFVGRLSWNVDNDWLAQEFQGCGTVVAARVQMDRNSGKSRGFAY 155
Query: 63 IEFKDPESVPLAMG-LNGQKLLGIPI---IVQPTQAEKNRAGNTLPNL--QPRGTGGPMR 116
+EF P A+ +NG+++ G + I QP Q + + QP T
Sbjct: 156 VEFSSPAEAQKAVEEMNGKQIDGREVNVDISQPRQPNPEKRAQVFGDSESQPSTT----- 210
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
L++G+L +N TED L F FG + +++L D ++G+ KG+G++ F + A KA E +
Sbjct: 211 LFVGNLSWNTTEDGLWTAFGEFGDVTHVRLPTDQESGKPKGFGYVEFGDQEGATKAYEAM 270
Query: 177 NGFELAGRPMKV 188
G +L GR +++
Sbjct: 271 KGKDLDGRTLRL 282
>gi|300796220|ref|NP_001179985.1| nucleolysin TIAR [Bos taurus]
gi|296472594|tpg|DAA14709.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Bos taurus]
Length = 380
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 17/189 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRR-FKGIAYIEF 65
DD P RT++ LS+ + + + FS +G + ++IT + + + + + E
Sbjct: 4 DDGQP-----RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEH 58
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
+D + AM NG+K+LG + V N A T P+ Q + T +++G L
Sbjct: 59 RDAAAALAAM--NGRKILGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPE 107
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
IT + ++ F PFGKI + +++ D TG+SKGYGF++F++ DA+ A + G L GR
Sbjct: 108 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 167
Query: 186 MKVGTVTDR 194
++ T +
Sbjct: 168 IRTNWATRK 176
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F LS I T D++ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + + NT ++ + + +Y G + +T+
Sbjct: 159 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 218
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I +++ V P+ KGY F+ F + + A A +NG + G +K
Sbjct: 219 QLMRQTFSPFGQI--MEIRVFPE----KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 271
>gi|407033602|gb|EKE36900.1| RNA recognition motif (RRM, RBD, or RNP domain) containing protein
[Entamoeba nuttalli P19]
Length = 136
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
RLYIGSL +++T++ L+ FE FG + + +++ D D+ RSKG+GF+TF +DAKKA E+
Sbjct: 3 RLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIEE 62
Query: 176 LNGFELAGRPMKVGTVTDRNE 196
+N EL GR +KV R E
Sbjct: 63 MNEQELEGRRIKVDVSRPREE 83
>gi|341882558|gb|EGT38493.1| hypothetical protein CAEBREN_09163 [Caenorhabditis brenneri]
Length = 757
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 91/179 (50%), Gaps = 9/179 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
I+ +S IR L + F G ++ + + T K A++E++ PE+ LA +
Sbjct: 104 IYVGSISFEIREDMLRKAFDPFGPIKSINMSWDPATGHHKTFAFVEYEIPEAALLAQESM 163
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQP------RGTGGPMRLYIGSLHFNITEDML 131
NGQ L G + V ++ R +P QP + R+Y+ S+H +++E L
Sbjct: 164 NGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVASVHPDLSESEL 223
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRS-KGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
G+FE FG+I QL P TGR +G+G+I F++ +A +N F+L G+ ++VG
Sbjct: 224 AGVFEAFGQIIKCQLARTP-TGRGHRGFGYIEFNNVTSQNEAIAGMNMFDLGGQYLRVG 281
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F I EDMLR F+PFG I +I + DP TG K + F+ + + A AQE
Sbjct: 103 RIYVGSISFEIREDMLRKAFDPFGPIKSINMSWDPATGHHKTFAFVEYEIPEAALLAQES 162
Query: 176 LNGFELAGRPMKVGTV 191
+NG L GR +KV ++
Sbjct: 163 MNGQMLGGRNLKVNSM 178
>gi|317420076|emb|CBN82112.1| Poly(U)-binding-splicing factor PUF60 [Dicentrarchus labrax]
Length = 513
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 64 FGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 123
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E+ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 124 MKHKGFAFVEYDVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 181
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FG+I + L DP TGR +G+G
Sbjct: 182 FN--------------RIYVASVHPDLSDDDIKSVFEAFGRIKSCTLARDPTTGRHRGFG 227
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A A +N F+L G+ ++VG
Sbjct: 228 FIEYEKPQSALDAVSSMNLFDLGGQYLRVG 257
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
Query: 17 RTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG 76
+TIF +LS + L + F+ G+V R+ T + +G Y+ F E+V A+
Sbjct: 44 KTIFVGKLSWNVDNDWLAQEFAECGEVVSARVQMDRNTGKSRGFGYVTFATVEAVDAAIA 103
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGP---MRLYIGSLHFNITEDMLRG 133
NG+++ G + + + EK++ + G L++G+L ++ TED L
Sbjct: 104 QNGKEIDGRAVNIDKS-IEKDKGAVRQKRAEAYGDKASEPSSVLFVGNLSWDATEDTLWE 162
Query: 134 IFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
F +G I ++++ D +TG+ KG+ ++ F + +KKA E G E+AGR ++V
Sbjct: 163 TFNEYGDIKSVRVPTDRETGKPKGFAYVEFSDIEASKKAFEGAAGAEVAGRNIRV 217
>gi|67483728|ref|XP_657084.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474323|gb|EAL51698.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449705266|gb|EMD45349.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 136
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
RLYIGSL +++T++ L+ FE FG + + +++ D D+ RSKG+GF+TF +DAKKA E+
Sbjct: 3 RLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIEE 62
Query: 176 LNGFELAGRPMKVGTVTDRNE 196
+N EL GR +KV R E
Sbjct: 63 MNEQELEGRRIKVDVSRPREE 83
>gi|50344898|ref|NP_001002121.1| poly(U)-binding-splicing factor PUF60-B [Danio rerio]
gi|47940403|gb|AAH71467.1| Poly-U binding splicing factor b [Danio rerio]
Length = 502
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 85 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 144
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 145 PGSIGQAQPIIEQ--LAEEARAYN--------------RIYVASIHPDLSDDDIKSVFEA 188
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L +P TG+ KG+GFI + + A +N F+L G+ ++VG
Sbjct: 189 FGKIKSCMLAREPTTGKHKGFGFIEYEKPQSSLDAVSSMNLFDLGGQYLRVG 240
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 70 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 129
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 130 MNSVMLGGRNIKVG 143
>gi|160332383|sp|Q6IQE0.2|PU60B_DANRE RecName: Full=Poly(U)-binding-splicing factor PUF60-B
Length = 516
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 102 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR 161
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H ++++D ++ +FE
Sbjct: 162 PGSIGQAQPIIEQ--LAEEARAYN--------------RIYVASIHPDLSDDDIKSVFEA 205
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FGKI + L +P TG+ KG+GFI + + A +N F+L G+ ++VG
Sbjct: 206 FGKIKSCMLAREPTTGKHKGFGFIEYEKPQSSLDAVSSMNLFDLGGQYLRVG 257
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 87 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 146
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 147 MNSVMLGGRNIKVG 160
>gi|440802763|gb|ELR23692.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 425
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 33 LEEFFSS--VGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIV- 89
+++FF S V V VRLIT T R KG YIE V + LNG G + V
Sbjct: 196 VKQFFESQGVSAVYAVRLITDRDTGRKKGFGYIETS-ASDVDAVLALNGADFEGRELKVD 254
Query: 90 ----QPTQAEKNRAGNTLPNLQPRGTGGPM---RLYIGSLHFNITEDMLRGIFEPFGKID 142
+P A+++ T P PR +G +++G+L FN TED + E FG +
Sbjct: 255 KANERPANADRD----TKPRDAPRQSGEAATDGNVFLGNLSFNSTEDSIWAALEQFGTVK 310
Query: 143 NIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRN 195
++++ D +T R +G+G+ F AD A KA ++ GR +++ T T R+
Sbjct: 311 AVRIVYDRETQRPRGFGYCEFEDADTANKAIAASGTVDVDGRQIRIDTATARS 363
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFG--KIDNIQLMVDPDTGRSKGYGFITFHSAD-DAKKAQ 173
+IG+L ++ ED ++ FE G + ++L+ D DTGR KG+G+I ++D DA A
Sbjct: 182 FFIGNLPWSAEEDTVKQFFESQGVSAVYAVRLITDRDTGRKKGFGYIETSASDVDAVLA- 240
Query: 174 EQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMER 212
LNG + GR +KV +R P+N D D R
Sbjct: 241 --LNGADFEGRELKVDKANER-------PANADRDTKPR 270
>gi|356536490|ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycine max]
Length = 394
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 86/157 (54%), Gaps = 5/157 (3%)
Query: 32 DLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQP 91
D+ +F S G + +V +T +T +F+GIA I FK + A+ L+G + G+ + +QP
Sbjct: 164 DIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRALALDGADMGGLFLKIQP 223
Query: 92 TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPD 151
+A + N + P G R+Y+G+L ++ITE+ LR F +I +++ +D +
Sbjct: 224 YKATR---ANKASDFAPEILEGYNRIYVGNLSWDITEEELRKFFNN-SEITSLRFGMDKE 279
Query: 152 TGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
TG +GY + F + KKA L+ L GRP+++
Sbjct: 280 TGEFRGYAHVDFGDSQSLKKAL-ALDQNVLFGRPVRI 315
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
++Y+G + + TED +R FE G I + M P+TG+ +G ITF + AK+A
Sbjct: 150 KIYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRAL-A 208
Query: 176 LNGFELAGRPMKV 188
L+G ++ G +K+
Sbjct: 209 LDGADMGGLFLKI 221
>gi|348522243|ref|XP_003448635.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Oreochromis niloticus]
Length = 387
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
E+ RT++ LS+ + + + F+ +G + ++I T ++EF D
Sbjct: 3 EDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIV--DTAGNDPYCFVEFYDHRHA 60
Query: 72 PLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
++ +NG+K++G + V N A T P Q + T +++G L IT +
Sbjct: 61 AASLAAMNGRKIMGKEVKV-------NWA--TTPTSQKKDTSNHFHVFVGDLSPEITTED 111
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A + + G L GR ++
Sbjct: 112 VKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNW 171
Query: 191 VTDR 194
T +
Sbjct: 172 ATRK 175
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F G++ D R++ T + KG ++ F D E+ M
Sbjct: 98 VFVGDLSPEITTEDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHM 157
Query: 76 G---LNGQKLLGIPIIVQP----TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P T E N + + + + +Y G + +TE
Sbjct: 158 GGQWLGGRQIRTNWATRKPPAPKTTHENNSKHLSFDEVVNQSSPSNCTVYCGGVSTGLTE 217
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I +++ V PD KGY F+ F+S + A A +NG + G +K
Sbjct: 218 QLMRQTFSPFGQI--MEVRVFPD----KGYSFVRFNSHESAAHAIVSVNGSSIEGHIVK 270
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 2/187 (1%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E + +F LS I L F S G++ R+IT +T R KG Y+EF
Sbjct: 244 EDGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKAADAA 303
Query: 73 LAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR-LYIGSLHFNITEDM 130
A ++ +L G P+ V + + N N P L+IG+L F+ T +
Sbjct: 304 KAQKDMHEYELDGRPLNVDFSTPRQKPDANARANKFGDKRSAPSNTLFIGNLSFDCTNET 363
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ +F +G + + L D D+G KG+G++ F S ++A A E L G ++AGRP++V
Sbjct: 364 IQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATAALEALQGQDVAGRPLRVDF 423
Query: 191 VTDRNES 197
R+++
Sbjct: 424 AAPRDDN 430
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 58/90 (64%)
Query: 107 QPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSA 166
+P G L++G+L +NI ED LR FE FG+I +++ D +TGR+KG+G++ F A
Sbjct: 240 EPVAEDGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKA 299
Query: 167 DDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
DA KAQ+ ++ +EL GRP+ V T R +
Sbjct: 300 ADAAKAQKDMHEYELDGRPLNVDFSTPRQK 329
>gi|348523085|ref|XP_003449054.1| PREDICTED: nucleolin-like isoform 4 [Oreochromis niloticus]
Length = 659
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 19/196 (9%)
Query: 10 SPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPE 69
S +E+DART+F L DL+E F ++R + + KGIAY+EFK
Sbjct: 327 SKKEKDARTLFVKNLPFSATADDLKEIFKDAVEIR----VPPGQNTSNKGIAYVEFKTEA 382
Query: 70 SVPLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
M G ++ G II+ T EK+ G R + L + +L FN TE
Sbjct: 383 DAERTMEETQGSEVQGRSIIIDYT-GEKSHMG-------ARASAASKTLVVNNLSFNATE 434
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
++L+ FE + + + GR KG+ F+ F S DDAK A E N E+ GR +++
Sbjct: 435 EVLQSTFEK-----AVSIRIPQRDGRPKGFAFLEFESTDDAKDALENFNNTEIEGRSIRL 489
Query: 189 GTVTDRNESVG-GGPS 203
R+ + G GP+
Sbjct: 490 EYSQSRDWNRGNSGPT 505
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 15/130 (11%)
Query: 56 RFKGIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGP 114
R KG A++EF+ + A+ N ++ G I ++ +Q+ R N RG GP
Sbjct: 455 RPKGFAFLEFESTDDAKDALENFNNTEIEGRSIRLEYSQS---RDWN-------RGNSGP 504
Query: 115 MR-LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
+ L++ L + TE+ L+ FE G + +++ D DTG SKG+GF+ F + DD K A+
Sbjct: 505 TKTLFVKGLSEDTTEETLKDAFE--GAV-AARIVTDRDTGSSKGFGFVDFSNEDDCKAAK 561
Query: 174 EQLNGFELAG 183
E + E+ G
Sbjct: 562 EAMEDGEIDG 571
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 20/156 (12%)
Query: 33 LEEFFSSVG-KVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQP 91
L +FFS G ++ DVRL K Y++F E + + LNG+K++G Q
Sbjct: 264 LRKFFSKNGLEITDVRLGGNKK------FGYVDFASEEDLQKGLELNGKKVMG-----QE 312
Query: 92 TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPD 151
+ EK R+ + + L++ +L F+ T D L+ IF+ D +++ V P
Sbjct: 313 VKLEKARSKEGSQDSKKEKDA--RTLFVKNLPFSATADDLKEIFK-----DAVEIRVPPG 365
Query: 152 TGRS-KGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
S KG ++ F + DA++ E+ G E+ GR +
Sbjct: 366 QNTSNKGIAYVEFKTEADAERTMEETQGSEVQGRSI 401
>gi|351706751|gb|EHB09670.1| Polyadenylate-binding protein 4-like protein [Heterocephalus
glaber]
Length = 370
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 129/280 (46%), Gaps = 39/280 (13%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-G 76
+F L + + + L E FS GK+ ++++ ++ KG A++ F+ + A+
Sbjct: 99 NVFVKNLDRSVDNKTLYEHFSGFGKILSSKVMSDDQGS--KGYAFVHFQSQSAANCAIEQ 156
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
+NG+ + P+ V P + K+R L+ R + +YI + ++ ++ L+G+F
Sbjct: 157 MNGKVINDRPVFVAPFKPRKDREAE----LRSRASEFT-NVYIKNFGDDMDDERLQGVFS 211
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
+GK ++++M D +G+SKG+GF++F S + AK+A E++NG ++ G+ + VG + E
Sbjct: 212 RYGKTLSVKVMTDS-SGKSKGFGFVSFESHEAAKRAVEEMNGKDMNGQLVFVGRAQKKVE 270
Query: 197 S-------------------------VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAE 231
V +D +++ + G+ R+++M +
Sbjct: 271 RQAELKHMFEQMKKERIRRCQGVKLYVKNLDDTVDDEQLRKEFSSFGSITRVKVMKEEGY 330
Query: 232 GTGLEL-----PPAAASALNLAQNAILNSSTPQVSSSTAP 266
G L P AA AL +L S ++ + P
Sbjct: 331 SRGFGLICFSSPEEAAKALTEMNGRVLGSKALSIALAQRP 370
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 37 FSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQPTQAE 95
FS+ G V +R+ TR+ G AY+ F A+ +N + G PI + +Q +
Sbjct: 30 FSAAGPVLSIRICRDLATRQPLGYAYVNFLQLADAQRALDTMNFDVIKGRPIRLMWSQRD 89
Query: 96 KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS 155
L+ G G +++ +L ++ L F FGKI + ++M D D G S
Sbjct: 90 --------ACLRRSGIGN---VFVKNLDRSVDNKTLYEHFSGFGKILSSKVMSD-DQG-S 136
Query: 156 KGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
KGY F+ F S A A EQ+NG + RP+ V R +
Sbjct: 137 KGYAFVHFQSQSAANCAIEQMNGKVINDRPVFVAPFKPRKD 177
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G LH TED+L F G + +I++ D T + GY ++ F DA++A + +
Sbjct: 12 LYVGDLHAEATEDLLFRKFSAAGPVLSIRICRDLATRQPLGYAYVNFLQLADAQRALDTM 71
Query: 177 NGFELAGRPMKV 188
N + GRP+++
Sbjct: 72 NFDVIKGRPIRL 83
>gi|400595086|gb|EJP62896.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 468
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 10/185 (5%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E + R ++ L QR+ L + F + G V++V++I + F ++E+ DP +
Sbjct: 64 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFN-YGFVEYDDPGAAD 122
Query: 73 LAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDML 131
AM LNG+++ I V + N +G T G +++G L + +D+L
Sbjct: 123 RAMQTLNGRRVHQSEIRVN-WAYQANSSGK-------EDTSGHFHIFVGDLSNEVNDDIL 174
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTV 191
F FG + ++M D TGRS+GYGF+ F +A+KA ++G L R ++
Sbjct: 175 TQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWA 234
Query: 192 TDRNE 196
+ +
Sbjct: 235 NQKGQ 239
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD-PESVPLAMGL 77
IF LS + L + FS+ G V + R++ KT R +G ++ F+D PE+ +
Sbjct: 160 IFVGDLSNEVNDDILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSM 219
Query: 78 NGQKLLGIPIIV-------QPT---------------------QAEKNRAGN------TL 103
+G+ L I QP+ Q + G+
Sbjct: 220 DGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGLTPTTPFGHHQFPTHGVGSYDVILAQT 279
Query: 104 PNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITF 163
PN Q +Y+G+L T + + +F+ FG + + D +G+ FI
Sbjct: 280 PNWQ-------TTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKM 326
Query: 164 HSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPS 203
+ ++A A Q+NG+ + GRP+K D+ + G PS
Sbjct: 327 DTHENASMAICQMNGYNVNGRPLKCSWGKDKTPNQGFDPS 366
>gi|402081154|gb|EJT76299.1| hypothetical protein GGTG_06219 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 618
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 29/205 (14%)
Query: 11 PEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPES 70
P ++ +F L+ + L E+FS G+V + ++ T R +G ++ FKDP++
Sbjct: 110 PNSKEDGKMFIGGLNWETTDQSLREYFSQFGEVIECTVMRDGSTGRSRGFGFLTFKDPKT 169
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
V + M + L G I+ P +A +P + T ++++G + + T+
Sbjct: 170 VNIVM-VKEHYLDGK--IIDPKRA--------IPRDEQEKTS---KIFVGGVSQDTTDQE 215
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSAD--DAKKAQEQLNGFELAGRPMKV 188
+ F FG++ + LM+D DTGR +G+GF+TF S DA AQE E+ G+P++V
Sbjct: 216 FKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACLAQE----LEIHGKPIEV 271
Query: 189 GTVTDR---------NESVGGGPSN 204
R N GGGP N
Sbjct: 272 KKAQPRGNMREEEEANRRAGGGPGN 296
>gi|367015628|ref|XP_003682313.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
gi|359749975|emb|CCE93102.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
Length = 436
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 95/185 (51%), Gaps = 13/185 (7%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
TIF +LS I L+ F +G V R+I T R +G Y++F+D A+
Sbjct: 188 TIFVGRLSWSIDDEWLKNEFDHIGGVVSARVIYERGTDRSRGYGYVDFEDKSYAEKAVKE 247
Query: 77 LNGQKLLGIPI-----IVQPTQAEKNRAGNTLPNL--QPRGTGGPMRLYIGSLHFNITED 129
++G+++ G PI +P ++ +L +P T L++G+L FN D
Sbjct: 248 MHGKEIDGRPINCDLSTSKPAGNPRDDRAKKFGDLPSEPSET-----LFLGNLSFNADRD 302
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
+ +F FG+I ++++ P+T + KG+G++ + + DDAKKA + L G + RP+++
Sbjct: 303 NIYEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYGNVDDAKKALDALQGEYIDNRPVRLD 362
Query: 190 TVTDR 194
T R
Sbjct: 363 YSTPR 367
>gi|413920411|gb|AFW60343.1| putative oligouridylate binding protein [Zea mays]
Length = 425
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E F S+G V +LI K+
Sbjct: 101 IEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKS---- 156
Query: 59 GIAYIEFKDPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
+I++ D LA + LNG++L G PI V N A + P T G +
Sbjct: 157 SFGFIDYYDRRYAALAILSLNGRQLYGQPIKV-------NWAYTSTPR---EDTSGHFNI 206
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F + + ++M D TGRS+G+GF++F + DA+ A LN
Sbjct: 207 FVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLN 266
Query: 178 GFELAGRPMKVGTVT 192
G L R ++ T
Sbjct: 267 GKWLGNRQIRCNWAT 281
>gi|326514938|dbj|BAJ99830.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 638
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 85/164 (51%), Gaps = 15/164 (9%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQP 91
L++ F G V+ V L T R KG A++E++ PE+ L++ +NG L G I V
Sbjct: 143 LKQAFQPFGPVKAVSLTFDPVTNRHKGFAFLEYEIPEAAQLSIEQMNGVILGGRNIKV-- 200
Query: 92 TQAEKNRAGNTLPNLQP------RGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQ 145
R N +P QP R+YI S+H ++TE ++ +FE FG+I +
Sbjct: 201 -----GRPSN-MPQAQPIIDQLTEEAKNYNRIYIASIHPDLTETDIQSVFEAFGEIKSCV 254
Query: 146 LMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
L D T + KGYGFI + + A+ A +N F+L G+ ++VG
Sbjct: 255 LAKDTATSKHKGYGFIEYGTVQAAQDAISAMNLFDLGGQHLRVG 298
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+YIGS++F + E ML+ F+PFG + + L DP T R KG+ F+ + + A+ + EQ
Sbjct: 128 RIYIGSINFELNEAMLKQAFQPFGPVKAVSLTFDPVTNRHKGFAFLEYEIPEAAQLSIEQ 187
Query: 176 LNGFELAGRPMKVG 189
+NG L GR +KVG
Sbjct: 188 MNGVILGGRNIKVG 201
>gi|388582392|gb|EIM22697.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 326
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 98/190 (51%), Gaps = 23/190 (12%)
Query: 19 IFCMQLSQRIRTRDLEEFF--SSVGKVRDVR----LITCNKTRRFKGIAYIEFKDPESVP 72
++ L+ +++ DL+ FF ++ G+V +V LIT N KG +EF PES
Sbjct: 12 VYVGNLNYEVKSEDLKSFFQDNAEGQVLEVASAEVLITPNGLS--KGCGIVEFTSPESAQ 69
Query: 73 LAM-GLNGQKLLGIPIIVQPTQAEKNRAG-NTLP------NLQPRGTGGPM------RLY 118
+A+ + + LLG P+ V+ + ++ R G N P N P G P +L+
Sbjct: 70 IAIESFSDKSLLGRPVFVREDREQEARFGANPTPSRSQQFNRGPYNPGPPQNAAPGTQLF 129
Query: 119 IGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
+G+L F + L+ +F G + + + PD G+SKG G ++F S +DA A E NG
Sbjct: 130 VGNLPFQVGWQDLKDLFRQAGHVVRADIQLFPD-GKSKGNGIVSFSSREDANNAIELYNG 188
Query: 179 FELAGRPMKV 188
+E GRP++V
Sbjct: 189 YEFYGRPIEV 198
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 17/185 (9%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKV--RDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG 76
+F L ++ +DL++ F G V D++L K+ KG + F E A+
Sbjct: 128 LFVGNLPFQVGWQDLKDLFRQAGHVVRADIQLFPDGKS---KGNGIVSFSSREDANNAIE 184
Query: 77 L-NGQKLLGIPIIVQP-----------TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHF 124
L NG + G PI V+ T + NR P P ++ +L +
Sbjct: 185 LYNGYEFYGRPIEVREDKFANSPRPSRTPYQFNRKAPQGPAPVPAAAAPNPQIVSKNLPW 244
Query: 125 NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
+ + + L +FE G + ++++D T RS+G G + F S A A E+ NG+ GR
Sbjct: 245 STSNEDLVELFETTGDVKKAEILIDSRTQRSRGVGIVEFFSTAAASVAIEKFNGYVYGGR 304
Query: 185 PMKVG 189
P+++G
Sbjct: 305 PLEIG 309
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGK-----IDNIQLMVDPDTGRSKGYGFITFHSADDAK 170
R+Y+G+L++ + + L+ F+ + + + ++++ P+ G SKG G + F S + A+
Sbjct: 11 RVYVGNLNYEVKSEDLKSFFQDNAEGQVLEVASAEVLITPN-GLSKGCGIVEFTSPESAQ 69
Query: 171 KAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLG 218
A E + L GRP+ V ++ G P+ + + R + G
Sbjct: 70 IAIESFSDKSLLGRPVFVREDREQEARFGANPTPSRSQQFNRGPYNPG 117
>gi|398409740|ref|XP_003856335.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
gi|339476220|gb|EGP91311.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
Length = 505
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 12/174 (6%)
Query: 30 TRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GLNGQKLLGIPI- 87
TR+ EEF G++ VR+IT + R KG Y+EF DP++ A+ NG +L G +
Sbjct: 259 TREFEEF----GELAGVRIITDRDSGRSKGFGYVEFSDPQNAKKALEAKNGAELDGRELR 314
Query: 88 --IVQPTQAEKNRAGNTLPNLQPR---GTGGP-MRLYIGSLHFNITEDMLRGIFEPFGKI 141
P + AGN + R T P L++G++ F+ E+ + F+ G I
Sbjct: 315 LDFSTPRTNDGPGAGNKSNDRAARFGDTTNAPAATLFVGNISFDADENAITEYFQEHGTI 374
Query: 142 DNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRN 195
++L D +TG KG+G++ S ++A+ A L G ++AGRP+++ +R+
Sbjct: 375 KAVRLPTDRETGAPKGFGYVEMSSIEEAQAAFTALQGADIAGRPIRLDYAAERS 428
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 89 VQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMV 148
+P A K + + P G L++G++ +N+ E+ L FE FG++ ++++
Sbjct: 221 AEPAHATKKNKTDAVDESAPTGN-----LFVGNISWNVDEEWLTREFEEFGELAGVRIIT 275
Query: 149 DPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTD 208
D D+GRSKG+G++ F +AKKA E NG EL GR +++ T R G G N D
Sbjct: 276 DRDSGRSKGFGYVEFSDPQNAKKALEAKNGAELDGRELRLDFSTPRTND-GPGAGNKSND 334
Query: 209 EMERAG 214
R G
Sbjct: 335 RAARFG 340
>gi|344306484|ref|XP_003421917.1| PREDICTED: nucleolysin TIAR-like [Loxodonta africana]
Length = 504
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 96/184 (52%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRR-FKGIAYIEFKDPES 70
E + R ++ LS+ + + + FS +G + ++IT + + + + + E +D +
Sbjct: 133 EVQKGRLLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAA 192
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
AM NG+K+LG + V N A T P+ Q + T +++G L IT +
Sbjct: 193 ALAAM--NGRKILGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTED 241
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFGKI + +++ D TG+SKGYGF++F++ DA+ A + G L GR ++
Sbjct: 242 IKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNW 301
Query: 191 VTDR 194
T +
Sbjct: 302 ATRK 305
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F LS I T D++ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 228 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 287
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + + NT ++ + + +Y G + +T+
Sbjct: 288 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 347
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I I++ + KGY F+ F + + A A +NG + G +K
Sbjct: 348 QLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 400
>gi|255939157|ref|XP_002560348.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584970|emb|CAP83009.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 507
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 92/182 (50%), Gaps = 6/182 (3%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLN 78
+F LS + L+ FS G++ VR++T ++ R +G Y+E+ AM
Sbjct: 254 LFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRESGRSRGFGYVEYTSAADAAKAMEAK 313
Query: 79 -GQKLLGIPI---IVQPTQA--EKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
G L G I P QA +++R + + + + L++G+L F+ TED L
Sbjct: 314 KGTDLDGRTINLDYAAPRQANPQQDRTQDRARSYGDQTSPESDTLFVGNLPFSATEDALH 373
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
+F G + I+L + +TGR KG+G++ F S D+AK A LNG EL GR +++ T
Sbjct: 374 EVFGAHGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAKAAHGALNGHELEGRAVRLDFST 433
Query: 193 DR 194
R
Sbjct: 434 PR 435
>gi|432929636|ref|XP_004081203.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oryzias
latipes]
Length = 526
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 77 FGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 136
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E+ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 137 MKHKGFAFVEYDVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 194
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FG+I + L DP +GR +G+G
Sbjct: 195 YN--------------RIYVASVHPDLSDDDIKSVFEAFGRIKSCMLARDPTSGRHRGFG 240
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A A +N F+L G+ ++VG
Sbjct: 241 FIEYEKPQSAVDAVSSMNLFDLGGQYLRVG 270
>gi|326511132|dbj|BAJ87580.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 7/201 (3%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGL- 77
I+ L +L FS G V DV++I T R +G A++ E A+ +
Sbjct: 110 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKAVQMF 169
Query: 78 NGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTG-GPMRLYIGSLHFNITEDMLR 132
NG L G + V P E+ A + R G ++Y G+L + + D L+
Sbjct: 170 NGALLGGRTVRVNFPEVPRGGERAVASAAVARTSLRVVDDGTYKVYAGNLGWGVRADALK 229
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
FE + +++ + DTGRS+G+GF++FH+ DAK A + ++G EL GRP+++ ++
Sbjct: 230 TAFEGQPGLVGARVIFERDTGRSRGFGFVSFHTIQDAKAALQAMDGVELDGRPLRL-SLA 288
Query: 193 DRNESVGGGPSNLDTDEMERA 213
+N G PS + + + A
Sbjct: 289 AQNPPAGSTPSTAQSQQEKTA 309
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
P R+Y+G+L + T L F G +D++Q++ D T RS+G+ F+T +A++A KA
Sbjct: 107 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKAV 166
Query: 174 EQLNGFELAGRPMKV 188
+ NG L GR ++V
Sbjct: 167 QMFNGALLGGRTVRV 181
>gi|47228429|emb|CAG05249.1| unnamed protein product [Tetraodon nigroviridis]
Length = 411
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 24 LSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKL 82
LS+ + + E F +G + ++I T ++EF + + +NG+K+
Sbjct: 5 LSRDVTEALILELFGQIGPCKSCKMIV--DTAGHDPYCFVEFYEHRHATATIAAMNGRKI 62
Query: 83 LGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKID 142
LG + V N A T P Q + T +++G L IT D ++ F PFGKI
Sbjct: 63 LGKEVKV-------NWA--TTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFGPFGKIS 113
Query: 143 NIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDR 194
+ +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++ T +
Sbjct: 114 DCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK 165
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 20/181 (11%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F GK+ D R++ T + KG ++ F D E+ M
Sbjct: 88 VFVGDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 147
Query: 76 GLNGQKLLGIPIIVQ-------PTQAEKNRAGNTLPNLQPRGTGGP--MRLYIGSLHFNI 126
G GQ L G I P + L + P +Y G + +
Sbjct: 148 G--GQWLGGRQIRTNWATRKPAPKTTNETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGL 205
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE ++R F PFG I +++ V PD KGY F+ F+S + A A +NG + G +
Sbjct: 206 TEQIMRQTFSPFGHI--MEIRVFPD----KGYSFVRFNSHEAAAHAIVSVNGTTIEGYVV 259
Query: 187 K 187
K
Sbjct: 260 K 260
>gi|3550485|emb|CAA11894.1| cp33Hv [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 7/201 (3%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGL- 77
I+ L +L FS G V DV++I T R +G A++ E A+ +
Sbjct: 110 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKAVQMF 169
Query: 78 NGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTG-GPMRLYIGSLHFNITEDMLR 132
NG L G + V P E+ A + R G ++Y G+L + + D L+
Sbjct: 170 NGALLGGRTVRVNFPEVPRGGERAVASAAVARTSLRVVDDGTYKVYAGNLGWGVRADALK 229
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
FE + +++ + DTGRS+G+GF++FH+ DAK A + ++G EL GRP+++ ++
Sbjct: 230 TAFEGQPGLVGARVIFERDTGRSRGFGFVSFHTIQDAKAALQAMDGVELDGRPLRL-SLA 288
Query: 193 DRNESVGGGPSNLDTDEMERA 213
+N G PS + + + A
Sbjct: 289 AQNPPAGSTPSTAQSQQEKTA 309
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
P R+Y+G+L + T L F G +D++Q++ D T RS+G+ F+T +A++A KA
Sbjct: 107 PGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKAV 166
Query: 174 EQLNGFELAGRPMKV 188
+ NG L GR ++V
Sbjct: 167 QMFNGALLGGRTVRV 181
>gi|348523079|ref|XP_003449051.1| PREDICTED: nucleolin-like isoform 1 [Oreochromis niloticus]
Length = 700
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 19/196 (9%)
Query: 10 SPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPE 69
S +E+DART+F L DL+E F ++R + + KGIAY+EFK
Sbjct: 368 SKKEKDARTLFVKNLPFSATADDLKEIFKDAVEIR----VPPGQNTSNKGIAYVEFKTEA 423
Query: 70 SVPLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
M G ++ G II+ T EK+ G R + L + +L FN TE
Sbjct: 424 DAERTMEETQGSEVQGRSIIIDYT-GEKSHMG-------ARASAASKTLVVNNLSFNATE 475
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
++L+ FE + + + GR KG+ F+ F S DDAK A E N E+ GR +++
Sbjct: 476 EVLQSTFEK-----AVSIRIPQRDGRPKGFAFLEFESTDDAKDALENFNNTEIEGRSIRL 530
Query: 189 GTVTDRNESVG-GGPS 203
R+ + G GP+
Sbjct: 531 EYSQSRDWNRGNSGPT 546
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 15/130 (11%)
Query: 56 RFKGIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGP 114
R KG A++EF+ + A+ N ++ G I ++ +Q+ R N RG GP
Sbjct: 496 RPKGFAFLEFESTDDAKDALENFNNTEIEGRSIRLEYSQS---RDWN-------RGNSGP 545
Query: 115 MR-LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
+ L++ L + TE+ L+ FE G + +++ D DTG SKG+GF+ F + DD K A+
Sbjct: 546 TKTLFVKGLSEDTTEETLKDAFE--GAV-AARIVTDRDTGSSKGFGFVDFSNEDDCKAAK 602
Query: 174 EQLNGFELAG 183
E + E+ G
Sbjct: 603 EAMEDGEIDG 612
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 20/156 (12%)
Query: 33 LEEFFSSVG-KVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQP 91
L +FFS G ++ DVRL K Y++F E + + LNG+K++G Q
Sbjct: 305 LRKFFSKNGLEITDVRLGGNKK------FGYVDFASEEDLQKGLELNGKKVMG-----QE 353
Query: 92 TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPD 151
+ EK R+ + + L++ +L F+ T D L+ IF+ D +++ V P
Sbjct: 354 VKLEKARSKEGSQDSKKEKDA--RTLFVKNLPFSATADDLKEIFK-----DAVEIRVPPG 406
Query: 152 TGRS-KGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
S KG ++ F + DA++ E+ G E+ GR +
Sbjct: 407 QNTSNKGIAYVEFKTEADAERTMEETQGSEVQGRSI 442
>gi|322709421|gb|EFZ00997.1| oligouridylate binding protein ,putative [Metarhizium anisopliae
ARSEF 23]
Length = 472
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E + R ++ L QR+ L + F + G V++V++I + F ++E+ DP +
Sbjct: 80 EPNKRALYVGGLEQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFN-YGFVEYDDPGAAE 138
Query: 73 LAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDML 131
AM LNG++ + + Q + K T +++G L + +D+L
Sbjct: 139 RAMSTLNGRREIRVNWAYQSNTSNKED------------TSSHFHIFVGDLSNEVNDDIL 186
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTV 191
F FG + ++M D TGR++GYGF+ F DA+KA ++G L R ++
Sbjct: 187 LQAFSAFGTVSEARVMWDMKTGRTRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWA 246
Query: 192 TDRNE 196
+ +
Sbjct: 247 NQKGQ 251
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 94/234 (40%), Gaps = 50/234 (21%)
Query: 4 AYSDDLSPEERDART--IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIA 61
AY + S +E + IF LS + L + FS+ G V + R++ KT R +G
Sbjct: 155 AYQSNTSNKEDTSSHFHIFVGDLSNEVNDDILLQAFSAFGTVSEARVMWDMKTGRTRGYG 214
Query: 62 YIEFKDPESVPLAMG-LNGQKL------------LGIPIIVQ----------PT------ 92
++ F+D A+ ++G+ L G P I Q PT
Sbjct: 215 FVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGLTPTTPFGHH 274
Query: 93 QAEKNRAG------NTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQL 146
Q + G N PN Q Y+G+L T + + +F+ FG + +
Sbjct: 275 QFPAHGVGSYDVVLNQTPNWQ-------TTCYVGNLTPYTTPNDVVPLFQNFGFVVESRF 327
Query: 147 MVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGG 200
D +G+ FI S ++A A Q+NG+ + GRP+K D+ + G
Sbjct: 328 QAD------RGFAFIKMDSHENAAMAICQMNGYNVNGRPLKCSWGKDKTPNAQG 375
>gi|212546733|ref|XP_002153520.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
gi|210065040|gb|EEA19135.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
Length = 472
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 8/184 (4%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLN 78
+F LS I L F S G++ VR++T +T R +G Y+E+ D S A
Sbjct: 226 LFIGNLSWNIDEEWLRREFESFGELSGVRIMTERETGRSRGFGYVEYADAASAKAAYEAK 285
Query: 79 GQKLLGIPII----VQP----TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
L I +P QA + +A + + + L++G+L F + E+
Sbjct: 286 KDTELDGRTINLDYAKPRDANAQAPREKAQTRARSFGDQTSPESNTLFLGNLVFGVDENA 345
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
+R +FE G I I+L DP+TGR KGYG++ F S D+A++A L G ++ GR +++
Sbjct: 346 VREVFESQGTIQGIRLPTDPETGRPKGYGYVEFSSVDEARQALNDLQGTDIGGRAIRLDF 405
Query: 191 VTDR 194
T R
Sbjct: 406 STPR 409
>gi|440297981|gb|ELP90622.1| nucleolysin TIA-1, putative [Entamoeba invadens IP1]
Length = 305
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 37/241 (15%)
Query: 15 DARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLA 74
+++++ L + + L FS VG V +++ +KT +IEF D + A
Sbjct: 37 NSKSVHVAGLHESVDETLLSRIFSIVGHVVSCKIMK-DKTGTHARYGFIEFIDHTTAEFA 95
Query: 75 M-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRG 133
+NG+ + G + V T ++ A G +L++G LH +T ++L
Sbjct: 96 KENMNGRLVYGKELKVNWTHDSQSDAK------------GSFKLFVGGLHTEVTNEILYQ 143
Query: 134 IFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV--GTV 191
F FG++ + +++ +G+S+GYGF+TF +DA+ A + +NG ++ GR +KV GT
Sbjct: 144 NFAKFGRVSDARVLRYSQSGKSQGYGFVTFIRKEDAETAMQMMNGEKIQGRTVKVNWGTA 203
Query: 192 TDR---------------------NESVGGGPSNLDTDEMERAGVDLGATGRLQLMFKLA 230
T + N VGG P + M + D G L++M A
Sbjct: 204 TQKPTETVKRGFDEISRETSNTNNNVYVGGIPKETEESTMRKLFGDFGEIIDLKIMRTDA 263
Query: 231 E 231
E
Sbjct: 264 E 264
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 7/187 (3%)
Query: 1 MRPAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGI 60
++ ++ D + + + +F L + L + F+ G+V D R++ +++ + +G
Sbjct: 109 LKVNWTHDSQSDAKGSFKLFVGGLHTEVTNEILYQNFAKFGRVSDARVLRYSQSGKSQGY 168
Query: 61 AYIEFKDPESVPLAMGL-NGQKLLGIPIIVQ---PTQAEKNRAGNTLPNLQPRGTGGPMR 116
++ F E AM + NG+K+ G + V TQ + +
Sbjct: 169 GFVTFIRKEDAETAMQMMNGEKIQGRTVKVNWGTATQKPTETVKRGFDEISRETSNTNNN 228
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
+Y+G + E +R +F FG+I ++++M T K YGF+ F S D+A KA L
Sbjct: 229 VYVGGIPKETEESTMRKLFGDFGEIIDLKIM---RTDAEKAYGFVRFVSHDNATKAIMML 285
Query: 177 NGFELAG 183
NG++L G
Sbjct: 286 NGYQLNG 292
>gi|410909355|ref|XP_003968156.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Takifugu
rubripes]
Length = 526
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 77 FGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 136
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E+ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 137 MKHKGFAFVEYDVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 194
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FG+I + L DP +GR +G+G
Sbjct: 195 FN--------------RIYVASVHPDLSDDDIKSVFEAFGRIKSCMLARDPTSGRHRGFG 240
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A A +N F+L G+ ++VG
Sbjct: 241 FIEYEKPQSALDAVSSMNLFDLGGQYLRVG 270
>gi|330793331|ref|XP_003284738.1| RNA-binding region-containing protein (RNP-1) [Dictyostelium
purpureum]
gi|325085338|gb|EGC38747.1| RNA-binding region-containing protein (RNP-1) [Dictyostelium
purpureum]
Length = 565
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 10/179 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
+F L + I + L + FS+ G + +++T + KG ++ ++ +S A+ +
Sbjct: 100 VFIKNLDKGIDHKALYDTFSAFGNILSCKVVTDDNNSS-KGFGFVHYESQDSADKAIAKV 158
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG + G + V P ++ K R T ++ +L ++T D L+ + P
Sbjct: 159 NGMMINGQKVFVGPFKSSKERGQPTEIKF--------TNVFFKNLAEDVTSDQLKELLAP 210
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
+G I N+ +M+D TG+SKG+ F F SAD AK E NG G+P+ G + E
Sbjct: 211 YGTITNVAIMLDEKTGKSKGFAFANFESADAAKNVVEIENGKVFHGKPLYAGRAQKKIE 269
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 3/180 (1%)
Query: 11 PEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPES 70
P E +F L++ + + L+E + G + +V ++ KT + KG A+ F+ ++
Sbjct: 182 PTEIKFTNVFFKNLAEDVTSDQLKELLAPYGTITNVAIMLDEKTGKSKGFAFANFESADA 241
Query: 71 VPLAMGL-NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITED 129
+ + NG+ G P+ Q + R + + G + LYI ++ +I D
Sbjct: 242 AKNVVEIENGKVFHGKPLYAGRAQKKIEREAELKHTFETKYQG--VNLYIKNIDDSIDND 299
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
LR +F FG I + +M D SKG+GF+ + S D+A +A ++NG + +P+ V
Sbjct: 300 KLREVFSQFGTITSAVVMKDDKATTSKGFGFVCYTSPDEATRAVTEMNGRMIGTKPLYVA 359
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 13/180 (7%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
+++ L + + L E F+ VG V ++R+ TRR AY+ + + A+
Sbjct: 11 SLYVGDLLPEVSEQTLFEVFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNAADAERALDT 70
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
LN + G P + +Q + P+L+ G G ++I +L I L F
Sbjct: 71 LNNTPIRGKPCRIMWSQRD--------PSLRKSGVGN---VFIKNLDKGIDHKALYDTFS 119
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
FG I + +++ D D SKG+GF+ + S D A KA ++NG + G+ + VG E
Sbjct: 120 AFGNILSCKVVTD-DNNSSKGFGFVHYESQDSADKAIAKVNGMMINGQKVFVGPFKSSKE 178
>gi|47221195|emb|CAG05516.1| unnamed protein product [Tetraodon nigroviridis]
Length = 520
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 5 YSDDLSP------EERDARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKT 54
+ D LSP + + A I C + + + + F+ G ++ + + + T
Sbjct: 71 FGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT 130
Query: 55 RRFKGIAYIEFKDPESVPLAMGLNGQKLLG---------------IPIIVQPTQAEKNRA 99
+ KG A++E+ PE+ LA+ +LG PII Q AE+ RA
Sbjct: 131 MKHKGFAFVEYDVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQ--LAEEARA 188
Query: 100 GNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYG 159
N R+Y+ S+H ++++D ++ +FE FG+I + L DP +GR +G+G
Sbjct: 189 FN--------------RIYVASVHPDLSDDDIKSVFEAFGRIKSCMLARDPTSGRHRGFG 234
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FI + A A +N F+L G+ ++VG
Sbjct: 235 FIEYEKPQSALDAVSSMNLFDLGGQYLRVG 264
>gi|410298560|gb|JAA27880.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 388
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 100/188 (53%), Gaps = 7/188 (3%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I +T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHA 61
Query: 71 VPLAMGLNGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+NG+K++G + V P+ +K+ + +T+ + Q + +++G L I
Sbjct: 62 AAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQR--SQDHFHVFVGDLSPEI 119
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
T + ++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR +
Sbjct: 120 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 179
Query: 187 KVGTVTDR 194
+ T +
Sbjct: 180 RTNWATRK 187
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPES 70
+D +F LS I T D++ F+ G++ D R++ T + KG ++ F D E+
Sbjct: 105 QDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAEN 164
Query: 71 VPLAMG---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLH 123
MG L G+++ +P + NT + + + +Y G +
Sbjct: 165 AIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVT 224
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+TE ++R F PFG+I +++ V PD KGY F+ F+S + A A +NG + G
Sbjct: 225 SGLTEQLMRQTFSPFGQI--MEIRVFPD----KGYSFVRFNSHESAAHAIVSVNGTTIEG 278
Query: 184 RPMK 187
+K
Sbjct: 279 HVVK 282
>gi|302507033|ref|XP_003015473.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
gi|291179045|gb|EFE34833.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 8/184 (4%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPE-SVPLAMGL 77
+F LS + L F G++ R++T ++ R +G Y+EF + E +V
Sbjct: 240 LFVGNLSWNVDEEWLRSEFEEFGELAGTRIVTDRESGRSRGFGYVEFVNVEDAVKAHTAK 299
Query: 78 NGQKLLGIPIIVQPTQAEKN-------RAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+L G + + A N RA N + + + L+IG++ F+ E+M
Sbjct: 300 KDAELDGRKMNLDYANARTNGNANPRERADNRAKSFGDQTSPESDTLFIGNISFSADENM 359
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ +F +G I I+L DP++GR KG+G++ F S D+A+ A E +G +L GR +++
Sbjct: 360 VQELFSKYGAIQGIRLPTDPESGRPKGFGYVQFSSVDEARAALEAEHGADLGGRSIRLDF 419
Query: 191 VTDR 194
T R
Sbjct: 420 STPR 423
>gi|350635107|gb|EHA23469.1| hypothetical protein ASPNIDRAFT_173997 [Aspergillus niger ATCC
1015]
Length = 235
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 15/190 (7%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGL 77
+F LS + L+ F S G++ VR++T T R +G Y+E+ + +V A
Sbjct: 2 NLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTN--AVDAAKAF 59
Query: 78 NGQK-------------LLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHF 124
+K G P K+RA + + + L++G+L F
Sbjct: 60 EAKKGAEIDGRVINLDYATGRPANKDQQGGFKDRANARARSFGDQASPESDTLFVGNLPF 119
Query: 125 NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
+ ED + +F G I I+L DPD+GR KG+G++ + S D+A+ A +L G +L GR
Sbjct: 120 DANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAAFNELQGADLLGR 179
Query: 185 PMKVGTVTDR 194
P+++ T R
Sbjct: 180 PVRLDFSTPR 189
>gi|23928438|gb|AAN40024.1| putative oligouridylate binding protein [Zea mays]
Length = 639
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E F S+G V +LI K+
Sbjct: 101 IEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS--- 157
Query: 59 GIAYIEFKDPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
+I++ D LA + LNG++L G PI V N A + P T G +
Sbjct: 158 -FGFIDYYDRRYAALAILSLNGRQLYGQPIKV-------NWAYTSTPR---EDTSGHFNI 206
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F + + ++M D TGRS+G+GF++F + DA+ A LN
Sbjct: 207 FVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLN 266
Query: 178 GFELAGRPMKVGTVT 192
G L R ++ T
Sbjct: 267 GKWLGNRQIRCNWAT 281
>gi|308807591|ref|XP_003081106.1| Ps16 protein (ISS) [Ostreococcus tauri]
gi|116059568|emb|CAL55275.1| Ps16 protein (ISS) [Ostreococcus tauri]
Length = 1094
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 13/187 (6%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPL 73
+D ++ LS + L E FS VRD ++ +T R +G A++ + E V
Sbjct: 911 QDEHRVYVGNLSWGVTDESLAELFSEF-DVRDASVMKDRETGRSRGFAFVSMNNEEDVER 969
Query: 74 A-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNL-------QPRGTGGPMRLYIGSLHFN 125
A LNG+++ G + V QA+ R + Q G R+Y G+L +
Sbjct: 970 ASAALNGREVDGRELRVSKAQAQAERGERPMRMPRQRRDFDQAEG----RRVYFGNLSWG 1025
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
+ + L+ + FG +++ +L+ D DTGRS+G+GF+T + +A + QLNG ++ GR
Sbjct: 1026 MDQYDLQDLCSEFGSVEDSRLITDRDTGRSRGFGFVTMSNTTEADEVVAQLNGQDVDGRV 1085
Query: 186 MKVGTVT 192
++V T
Sbjct: 1086 LRVNIAT 1092
>gi|168053751|ref|XP_001779298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669310|gb|EDQ55900.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 99/197 (50%), Gaps = 3/197 (1%)
Query: 28 IRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPI 87
I D+ EFF G + ++ +T T +FKGIA+I F+ E+ AM L+ + G +
Sbjct: 11 ITENDIHEFFQECGTIAELDCMTFPDTGKFKGIAFITFRTEEAAKRAMALDAADMGGRFL 70
Query: 88 IVQPTQAEKNRAGNT-LPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQL 146
++ + + GN L P+ G + YIG+L ++ITE +R F+ KI++++
Sbjct: 71 KIEMCKIKPLEVGNKPLFKEPPKKQPGCLAAYIGNLSYDITEKEVRRFFKG-CKIESVRF 129
Query: 147 MVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLD 206
+ +TG +G+G I F + D++ +A +L+ L GRP+K+ + + + G
Sbjct: 130 AENKETGEFRGFGHIDF-ADDESLEAAMKLDQEPLLGRPLKIAYSVPQKDKIMGVRGGSK 188
Query: 207 TDEMERAGVDLGATGRL 223
E ++ G G +
Sbjct: 189 PAETKKGCFTCGEEGHM 205
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
++ +G + + ITE+ + F+ G I + M PDTG+ KG FITF + + AK+A
Sbjct: 1 KVMVGGMPYYITENDIHEFFQECGTIAELDCMTFPDTGKFKGIAFITFRTEEAAKRAM-A 59
Query: 176 LNGFELAGRPMKVGTVTDRNESVGGGP 202
L+ ++ GR +K+ + VG P
Sbjct: 60 LDAADMGGRFLKIEMCKIKPLEVGNKP 86
>gi|444316792|ref|XP_004179053.1| hypothetical protein TBLA_0B07170 [Tetrapisispora blattae CBS 6284]
gi|387512093|emb|CCH59534.1| hypothetical protein TBLA_0B07170 [Tetrapisispora blattae CBS 6284]
Length = 470
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 21/192 (10%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E + ++ L + I L+++F G + +V++I +K ++ A++E+
Sbjct: 79 ETSDKILYVGNLDKSINEDSLKQYFQVGGPIANVKII-VDKNNKYCNYAFVEYLKHHDAN 137
Query: 73 LAM-GLNGQ----KLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
+A+ LNG+ K++ I Q Q+ + N L+IG L+ ++
Sbjct: 138 VALQTLNGKHIEKKIVKINWAFQSQQSSNDDTFN---------------LFIGDLNIDVN 182
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++ L F+ F +M D TGRS+GYGF +F + +DA+ A +Q+ G EL GRP++
Sbjct: 183 DESLTAAFKDFPSFVQAHVMWDMQTGRSRGYGFASFSTQNDAQLAMDQMQGKELNGRPIR 242
Query: 188 VGTVTDRNESVG 199
+ + R+ G
Sbjct: 243 INWASKRDNQQG 254
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 3/188 (1%)
Query: 3 PAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY 62
PA E ++ LS + L F S G+V + R++ ++ ++ KG +
Sbjct: 198 PAKKSRTDGEAEPTANVYVGGLSWNVDNEWLASEFQSCGEVVEARVMFDHQNQKSKGFGF 257
Query: 63 IEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEK--NRAGNTLPNLQPRGTGGPMRLYIG 120
+ FK E A+ + G ++ G I AEK N + + LY+G
Sbjct: 258 VRFKTAEEAAKAVAMTGHEIDGRAIRCD-FAAEKTDNPVERRAQKFNDQRSAPAATLYLG 316
Query: 121 SLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFE 180
L +++ ED + F FG I + L D +TG KG+G++ F D A A E +NG E
Sbjct: 317 GLSYDLNEDAVYEAFGDFGDIQRVSLPTDRETGAPKGFGYVEFADVDQATAALEAMNGKE 376
Query: 181 LAGRPMKV 188
L+GR ++V
Sbjct: 377 LSGRRIRV 384
>gi|367043706|ref|XP_003652233.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
gi|346999495|gb|AEO65897.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
Length = 533
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 22/197 (11%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
S D E+ A T+F L + L E F + V R++T + R +G Y++F
Sbjct: 278 SADGEASEKSA-TLFVGNLGWGVDDNALYEEFQNNEGVTGARVVTDKDSGRSRGFGYVDF 336
Query: 66 KDPESVPLAMG-LNGQKLLG----IPIIVQPTQAEKNRAGNTLPNLQP----RGTGGPMR 116
+ PE+ A NG L G + +P+ ++ PN + R G +
Sbjct: 337 ETPEAAEKAYNDKNGAFLQGREMRLDFAAKPS-------ADSTPNARAAERARKHGDVIS 389
Query: 117 -----LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKK 171
L++G+L F+ E+ + F K+ ++++ D ++GR KG+ ++TF S DDAK
Sbjct: 390 PESDTLFVGNLSFSANEESVSAFFNKVAKVQSLRIPTDQESGRPKGFAYVTFSSVDDAKA 449
Query: 172 AQEQLNGFELAGRPMKV 188
A E LNG +L GRP+++
Sbjct: 450 AFEALNGSDLDGRPVRL 466
>gi|66809079|ref|XP_638262.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466725|gb|EAL64776.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 1035
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+YIGS+++N+TED +R IF FG++ + LM + DTG+ KG+GF+ F A A
Sbjct: 770 RIYIGSINWNVTEDQVRSIFSQFGRVISCFLMQNADTGKHKGFGFVDFELKKSADDAIAT 829
Query: 176 LNGFELAGRPMKVG 189
+NGFEL GR +KVG
Sbjct: 830 MNGFELLGRSIKVG 843
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GSLHF++TED++R F FG I ++ L D +G+SKGY FI + + + A KA +
Sbjct: 589 RIYVGSLHFSLTEDVIRATFSVFGNIKSLALGKDA-SGKSKGYAFIEYDNQESAAKALQS 647
Query: 176 LNGFELAGRPMKVG 189
+ + + GR +KV
Sbjct: 648 MTNYVMCGRAIKVA 661
>gi|425783198|gb|EKV21057.1| Nucleolin protein Nsr1, putative [Penicillium digitatum Pd1]
Length = 467
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLN 78
+F LS + ++ FS G++ VR++T +T R +G Y+E+ AM
Sbjct: 213 LFIGNLSWNVDEEWVQREFSEFGELSGVRIVTDRETGRSRGFGYVEYNSAADAAKAMEAK 272
Query: 79 -GQKLLGIPI---IVQPTQAEKNRAGNTLPNLQPRGTGGPMR-----LYIGSLHFNITED 129
G L G I P QA N G + R G L++G+L F+ TED
Sbjct: 273 KGTDLDGRTINLDYAAPRQA--NTQGADRSQDRARSYGDQTSPESDTLFVGNLPFSATED 330
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
L +F G + I+L + +TGR KG+G++ F S D+AK A LNG EL GR +++
Sbjct: 331 ALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAKAAHAALNGHELEGRAIRLD 390
Query: 190 TVTDR 194
T R
Sbjct: 391 FSTPR 395
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 56/95 (58%)
Query: 112 GGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKK 171
G L+IG+L +N+ E+ ++ F FG++ ++++ D +TGRS+G+G++ ++SA DA K
Sbjct: 208 GAVANLFIGNLSWNVDEEWVQREFSEFGELSGVRIVTDRETGRSRGFGYVEYNSAADAAK 267
Query: 172 AQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLD 206
A E G +L GR + + R + G + D
Sbjct: 268 AMEAKKGTDLDGRTINLDYAAPRQANTQGADRSQD 302
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 4 AYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
+Y D SPE + T+F L L E F + G V +RL T +T R KG Y+
Sbjct: 306 SYGDQTSPE---SDTLFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKGFGYV 362
Query: 64 EFKDPESVPLA-MGLNGQKLLGIPI 87
+F + A LNG +L G I
Sbjct: 363 QFSSIDEAKAAHAALNGHELEGRAI 387
>gi|366987527|ref|XP_003673530.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
gi|342299393|emb|CCC67147.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
Length = 415
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 14/185 (7%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
TIF +LS I L++ F +G V R+I T R +G Y++F+D A+
Sbjct: 163 TIFVGRLSWSIDDEWLKKEFEHIGGVVSARVIMERGTDRSRGYGYVDFEDKSYAEKAIKE 222
Query: 77 LNGQKLLGIPIIV-----QPTQAEKNRAGN--TLPNLQPRGTGGPMRLYIGSLHFNITED 129
+ G+++ G I V +P +RA +P+ +P T L++G+L FN D
Sbjct: 223 MQGKEIDGREINVDMSTSKPAAGNNDRAKKFGDVPS-EPSET-----LFLGNLSFNADRD 276
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
+ +F +G+I ++++ P+T + KG+G++ + + +DAKKA E L G + RP+++
Sbjct: 277 AISELFSKYGEIISVRIPTHPETEQPKGFGYVQYTNVEDAKKALEGLQGEYIDNRPVRLD 336
Query: 190 TVTDR 194
T R
Sbjct: 337 YSTPR 341
>gi|320585953|gb|EFW98632.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Grosmannia clavigera kw1407]
Length = 488
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 4 AYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
AY S E + R ++ L QR+ L + F + G V++V++I +K + ++
Sbjct: 74 AYGGRRSAPEPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIP-DKNAKGYNYGFV 132
Query: 64 EFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSL 122
E+ DP + AM LNG+++ I V + T G +++G L
Sbjct: 133 EYDDPGAAERAMQNLNGRRVHQSEIRVNWAYQSNTTS--------KEDTSGHFHIFVGDL 184
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
+ +++L F FG + ++M D TGRS+GYGF+ F DA+KA ++G L
Sbjct: 185 SNEVNDEVLTQAFTSFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLG 244
Query: 183 GRPMKVGTVTDRNESVGGGPSNLDTDEMERAGV 215
R ++ + G PS +++ G+
Sbjct: 245 SRAIRCNWANQK-----GQPSMAQQQALQQVGM 272
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 86/217 (39%), Gaps = 48/217 (22%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD-PESVPLAMGL 77
IF LS + L + F+S G V + R++ KT R +G ++ F+D P++ +
Sbjct: 179 IFVGDLSNEVNDEVLTQAFTSFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSM 238
Query: 78 NGQKL------------LGIPIIVQ--------------------PTQA--EKNRAGNTL 103
+G+ L G P + Q PTQ N
Sbjct: 239 DGEWLGSRAIRCNWANQKGQPSMAQQQALQQVGMTPTTPFGHHHFPTQGINSYEMVINQT 298
Query: 104 PNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITF 163
P Q Y+G+L T++ L +F+ FG + + D +G+ FI
Sbjct: 299 PAWQ-------TTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQSD------RGFAFIKL 345
Query: 164 HSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGG 200
S ++A A QLNG+ + GRP+K D+ + G
Sbjct: 346 DSHENAAMAICQLNGYNVNGRPLKCSWGKDKTPNAQG 382
>gi|158255914|dbj|BAF83928.1| unnamed protein product [Homo sapiens]
Length = 375
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 17/189 (8%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRR-FKGIAYIEF 65
DD P RT++ LS+ + + + FS +G + ++IT + + + + + E
Sbjct: 4 DDGQP-----RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEH 58
Query: 66 KDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
+D + AM NG+K+LG + V N A T P+ Q + T +++G L
Sbjct: 59 RDAAAALAAM--NGRKILGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPE 107
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
IT + ++ F PFGKI + +++ D TG+SKGYGF++F++ D + A + G L GR
Sbjct: 108 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDGENAIVHMGGQWLGGRQ 167
Query: 186 MKVGTVTDR 194
++ T +
Sbjct: 168 IRTNWATRK 176
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F LS I T D++ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDGENAIVHM 158
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + + NT ++ + + +Y G + +T+
Sbjct: 159 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 218
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I +++ V P+ KGY F+ F + + A A +NG + G +K
Sbjct: 219 QLMRQTFSPFGQI--MEIRVFPE----KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 271
>gi|425781065|gb|EKV19047.1| Nucleolin protein Nsr1, putative [Penicillium digitatum PHI26]
Length = 537
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLN 78
+F LS + L+ FS G++ VR++T +T R +G Y+E+ AM
Sbjct: 283 LFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRETGRSRGFGYVEYNSAADAAKAMEAK 342
Query: 79 -GQKLLGIPI---IVQPTQAEKNRAGNTLPNLQPRGTGGPMR-----LYIGSLHFNITED 129
G L G I P QA N G + R G L++G+L F+ TED
Sbjct: 343 KGTDLDGRTINLDYAAPRQA--NTQGADRSQDRARSYGDQTSPESDTLFVGNLPFSATED 400
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
L +F G + I+L + +TGR KG+G++ F S D+AK A LNG EL GR +++
Sbjct: 401 ALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAKAAHAALNGHELEGRAIRLD 460
Query: 190 TVTDR 194
T R
Sbjct: 461 FSTPR 465
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%)
Query: 112 GGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKK 171
G L+IG+L +N+ E+ L+ F FG++ ++++ D +TGRS+G+G++ ++SA DA K
Sbjct: 278 GAVANLFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRETGRSRGFGYVEYNSAADAAK 337
Query: 172 AQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLD 206
A E G +L GR + + R + G + D
Sbjct: 338 AMEAKKGTDLDGRTINLDYAAPRQANTQGADRSQD 372
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 4 AYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
+Y D SPE + T+F L L E F + G V +RL T +T R KG Y+
Sbjct: 376 SYGDQTSPE---SDTLFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKGFGYV 432
Query: 64 EFKDPESVPLA-MGLNGQKLLGIPI 87
+F + A LNG +L G I
Sbjct: 433 QFSSIDEAKAAHAALNGHELEGRAI 457
>gi|115478330|ref|NP_001062760.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|49387841|dbj|BAD26506.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|49388840|dbj|BAD26030.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|113630993|dbj|BAF24674.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|215695254|dbj|BAG90445.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737768|dbj|BAG96898.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641205|gb|EEE69337.1| hypothetical protein OsJ_28655 [Oryza sativa Japonica Group]
Length = 245
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 10 SPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPE 69
+PEE AR ++ + + + +L F+ G V ++ T R + ++ PE
Sbjct: 63 APEEVAARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPE 122
Query: 70 SVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
A+ LN ++ G I V T++ + P +P ++Y+G+L ++T
Sbjct: 123 EANAAIESLNETEVGGRKIKVNVTESFLPNIDRSAPEPEPVFVDSQYKVYVGNLAKSVTT 182
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+ML+ F G++ + + P T +SKGYGF+TF S ++ + A N EL G+P++V
Sbjct: 183 EMLKNFFSEKGEVLSATVSRIPGTAKSKGYGFVTFSSEEEVQAAVSTFNNAELEGQPIRV 242
>gi|940288|gb|AAA74208.1| protein localized in the nucleoli of pea nuclei; ORF; putative
[Pisum sativum]
Length = 611
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 94/187 (50%), Gaps = 15/187 (8%)
Query: 16 ARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM 75
++T+F LS ++ D+E FF G+V DVRL + ++ RFKG ++EF E+ A+
Sbjct: 354 SKTLFVGNLSFSVQRSDIESFFQECGEVVDVRLAS-DEDGRFKGFGHVEFATAEAAQSAL 412
Query: 76 GLNGQKLL--GIPIIVQPTQAE--KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDML 131
LNGQ+LL G+ + + + N GN Q G G +++ ++ ED +
Sbjct: 413 ELNGQELLQRGVRLDLARERGAFTPNSTGN-----QNSGRGQSQTVFVRGFDKSLGEDEI 467
Query: 132 RGIFEPF----GKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
R E G+ + + D DTG SKG+ ++ F +D KA E L+G EL G P+
Sbjct: 468 RAKLEQHFASCGQASRVSIPKDYDTGYSKGFAYMDFKDSDSFNKAIE-LHGSELDGYPLS 526
Query: 188 VGTVTDR 194
+ R
Sbjct: 527 IDEAKPR 533
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 108 PRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSAD 167
P GG L++G+L F++ + F+ G++ +++L D D GR KG+G + F +A+
Sbjct: 348 PSENGGSKTLFVGNLSFSVQRSDIESFFQECGEVVDVRLASDED-GRFKGFGHVEFATAE 406
Query: 168 DAKKAQEQLNGFELAGRPMKVGTVTDR 194
A+ A E LNG EL R +++ +R
Sbjct: 407 AAQSALE-LNGQELLQRGVRLDLARER 432
>gi|66362264|ref|XP_628096.1| Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x
RRM domains [Cryptosporidium parvum Iowa II]
gi|46227417|gb|EAK88352.1| Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x
RRM domains [Cryptosporidium parvum Iowa II]
gi|323508937|dbj|BAJ77361.1| cgd1_2730 [Cryptosporidium parvum]
gi|323510323|dbj|BAJ78055.1| cgd1_2730 [Cryptosporidium parvum]
Length = 693
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 41/213 (19%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
I+ L + DL++ F S G + ++ + + R KG +IE+ ES +A+ +
Sbjct: 292 IYVGSLDYSLNEADLKQVFGSFGPIVNIDM--PREGNRSKGFCFIEYTSQESAEMALATM 349
Query: 78 NGQKLLGIPIIV-QPTQAEKNRAGNTL--------------PNL---------------- 106
N L G PI V +PT A + + PN+
Sbjct: 350 NRFVLKGRPIRVGRPTNAASSNGNQSGSGGIGGGGSGNVINPNIAVFNNNHITHQNHQIQ 409
Query: 107 --QPRGTG----GPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDT-GRSKGYG 159
GTG R+YIGS+ ++ T D LR IF+ FG I + QL+ + G +GYG
Sbjct: 410 SETTHGTGIATHSQNRIYIGSVPYSFTTDDLRHIFKTFGVILSCQLIPSIEKPGTHRGYG 469
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
FI F +AD AK A E +NGFE+ G+ +KV T
Sbjct: 470 FIEFGTADQAKLAIETMNGFEVGGKQLKVNVAT 502
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 108 PRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTG-RSKGYGFITFHSA 166
PR + R+Y+GSL +++ E L+ +F FG I NI + P G RSKG+ FI + S
Sbjct: 283 PRQSSQISRIYVGSLDYSLNEADLKQVFGSFGPIVNIDM---PREGNRSKGFCFIEYTSQ 339
Query: 167 DDAKKAQEQLNGFELAGRPMKVGTVTDRNESVG 199
+ A+ A +N F L GRP++VG T+ S G
Sbjct: 340 ESAEMALATMNRFVLKGRPIRVGRPTNAASSNG 372
>gi|449446638|ref|XP_004141078.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 420
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 17/195 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E FSS+G + +LI K+
Sbjct: 28 IEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSIGPIEGCKLIRKEKS---- 83
Query: 59 GIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
++++ D S +++ LNG+ L G PI V A R T G +
Sbjct: 84 SYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYASSQR----------EDTSGHFNI 133
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F + + ++M D TGRS+GYGF+ F + DA+ A +N
Sbjct: 134 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFRNEQDAQSAINDIN 193
Query: 178 GFELAGRPMKVGTVT 192
G L R ++ T
Sbjct: 194 GKWLGSRQIRCNWAT 208
>gi|310790913|gb|EFQ26446.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 474
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 8/169 (4%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-G 76
T+F L+ + L E F + R++T T R +G Y++F PE+ A+ G
Sbjct: 228 TLFVGSLAWAVDDNSLYEAFQEFADLTGARVVTDKATGRSRGFGYVDFATPEAAAAALEG 287
Query: 77 LNGQKLLG----IPIIVQPTQAEKNRAGNTLPNLQPRG-TGGPMR--LYIGSLHFNITED 129
G++L G I Q + N Q G T P L++G+L F++ +D
Sbjct: 288 SQGRELAGRAMNIDFSGQKPAGDGNHQARASDRAQRHGDTVSPESDTLFVGNLPFDVDQD 347
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
+ F ++ +++L DP+TG KG+G+++F+S DDAK A QLNG
Sbjct: 348 TVNAFFSTAAEVTSVRLPTDPETGNLKGFGYVSFNSIDDAKTAFAQLNG 396
>gi|413920410|gb|AFW60342.1| nucleolysin TIAR [Zea mays]
Length = 447
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E F S+G V +LI K+
Sbjct: 57 IEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS--- 113
Query: 59 GIAYIEFKDPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
+I++ D LA + LNG++L G PI V N A + P T G +
Sbjct: 114 -FGFIDYYDRRYAALAILSLNGRQLYGQPIKV-------NWAYTSTPR---EDTSGHFNI 162
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F + + ++M D TGRS+G+GF++F + DA+ A LN
Sbjct: 163 FVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLN 222
Query: 178 GFELAGRPMKVGTVT 192
G L R ++ T
Sbjct: 223 GKWLGNRQIRCNWAT 237
>gi|395548760|ref|XP_003775245.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 730
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
+F L + I + L + FSS G + ++IT + KG ++ F+ ES A+ +
Sbjct: 200 VFVKNLEKSINNKSLYDAFSSFGNILSCKVITDDNGS--KGYGFVHFEHRESAERAIQKM 257
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR----LYIGSLHFNITEDMLRG 133
NG L + I V ++ K+R G R +YI + ++ ED L
Sbjct: 258 NGILLNDLKIFVGHFKSRKDRESEL---------GAQTREFTNVYIKNFGEDMDEDRLSK 308
Query: 134 IFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTD 193
IFE FG ++++M D D GRSKG+GF+ F +DA+ A + +NG EL GR + G
Sbjct: 309 IFEKFGPTLSVKVMRD-DCGRSKGFGFVNFQKHEDAQNAIDNMNGKELNGRQIYAGRAQK 367
Query: 194 RNE 196
+ E
Sbjct: 368 KLE 370
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 10/212 (4%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
+L + R+ ++ + + L + F G V+++ + R KG ++ F+
Sbjct: 280 SELGAQTREFTNVYIKNFGEDMDEDRLSKIFEKFGPTLSVKVMR-DDCGRSKGFGFVNFQ 338
Query: 67 DPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR-----LYIG 120
E A+ +NG++L G I Q + R + + +R LYI
Sbjct: 339 KHEDAQNAIDNMNGKELNGRQIYAGRAQKKLERQTQLQRHFEQLKQNRIVRYQGVNLYIK 398
Query: 121 SLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFE 180
+L +I ++ LR F FG I + ++M++ GRSKG+GF+ F + ++A A ++NG
Sbjct: 399 NLDDDIDDENLRKEFSSFGTITSAKVMMN--NGRSKGFGFVCFSAPEEATTAVTEMNGRL 456
Query: 181 LAGRPMKVGTVTDRNESVGGGPSNLDTDEMER 212
+A +P+ V + R E +N M R
Sbjct: 457 VASKPLYVA-LAQRKEERKAHLANQYVQRMAR 487
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G LH +TE ML F P G I +I++ D T RS GY ++ F DA++ +
Sbjct: 112 LYVGDLHHEVTEAMLYEKFSPAGPILSIRVCRDAVTHRSLGYAYVNFQHLADAERVMTDM 171
Query: 177 NGFELAGRPMKV 188
N + + G+P+++
Sbjct: 172 NLYIIKGKPVRL 183
>gi|328783360|ref|XP_001121000.2| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
mellifera]
Length = 592
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 6/257 (2%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
++ +S ++ + + F G ++ + + T++ KG A++E++ PE+ LA+ +
Sbjct: 122 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 181
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG + G I V + +A + + + R+YI S+H ++TED ++ +FE
Sbjct: 182 NGVMIGGRNIKVVGRPSNMPQAQSVIDEITEESKHY-NRIYIASIHQDLTEDDIKSVFEA 240
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES 197
FG I +L R KGYGFI + + A +A +N F+L G+ ++VG +
Sbjct: 241 FGPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITPPNA 300
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGT---GL-ELPPAAASALNLAQNAIL 253
+ G PS A AT ++Q M +A GL +L AA LN A I+
Sbjct: 301 LMGPPSGTSMMPTAAAVAAAAATAKIQAMDAVASNAVALGLTKLGAAAPPILNQALPGIV 360
Query: 254 NSSTPQVSSSTAPPIAT 270
S + P IAT
Sbjct: 361 RPSIAPATMMAPPTIAT 377
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F + ED +R F PFG I +I + DP T + KG+ F+ + + A+ A EQ
Sbjct: 121 RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQ 180
Query: 176 LNGFELAGRPMKV 188
+NG + GR +KV
Sbjct: 181 MNGVMIGGRNIKV 193
>gi|291287189|ref|YP_003504005.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
gi|290884349|gb|ADD68049.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
Length = 94
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%)
Query: 115 MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQE 174
M +Y+G+L + +ED L +FE G++D+ +++ D DTGRSKG+GF+ A+ AK A E
Sbjct: 1 MNIYVGNLSYTSSEDELFELFENMGQVDSARIITDRDTGRSKGFGFVEMADAEQAKAAIE 60
Query: 175 QLNGFELAGRPMKVGTVTDRNESVGGGPSN 204
QLNG E GR + V RN GG N
Sbjct: 61 QLNGTEFGGRNLTVNEAKPRNNDRSGGGFN 90
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-G 76
I+ LS +L E F ++G+V R+IT T R KG ++E D E A+
Sbjct: 2 NIYVGNLSYTSSEDELFELFENMGQVDSARIITDRDTGRSKGFGFVEMADAEQAKAAIEQ 61
Query: 77 LNGQKLLGIPIIVQPTQAEKN-RAGNTLPN 105
LNG + G + V + N R+G N
Sbjct: 62 LNGTEFGGRNLTVNEAKPRNNDRSGGGFNN 91
>gi|66821129|ref|XP_644081.1| RNA recognition motif-containing protein RRM [Dictyostelium
discoideum AX4]
gi|60472201|gb|EAL70154.1| RNA recognition motif-containing protein RRM [Dictyostelium
discoideum AX4]
Length = 904
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 91/204 (44%), Gaps = 16/204 (7%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ESV 71
ERD +F L DLE FS GKV +++ K + G ++ F P ES
Sbjct: 105 ERDQTNVFVKHLPYEFNDEDLENLFSKYGKVLSSKVMIDPKGNSY-GYGFVRFSSPQESA 163
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDML 131
L+G + ++ R N NL + L+I L +++T+D L
Sbjct: 164 AAIEELDGYQYQNKKLLC--------RLSNLYTNLNSKYPSN--NLFIKPLPYDVTDDQL 213
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFEL---AGRPMKV 188
R +FEPFGKI ++M+D G+SK GF+ F S DA KA + +NG + +G P+ V
Sbjct: 214 RKLFEPFGKIIECKVMLD-HNGQSKFAGFVRFSSELDASKAIDAMNGVRINKDSGYPLVV 272
Query: 189 GTVTDRNESVGGGPSNLDTDEMER 212
+ + + T E+
Sbjct: 273 KYADTEQQKISRKQRKMQTIYQEK 296
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
+ + L +F FGK+ +++++ D DTG +KGYGF+ F+ D+A K Q+++NGF + +
Sbjct: 780 VDDSYLFQLFSQFGKLQSVRVITDKDTGENKGYGFVKFYQTDEALKCQKEMNGFRIGSKF 839
Query: 186 MKVGTVTDRNESVGGGPS 203
+KV + + ES+ G S
Sbjct: 840 LKV-KLKNEKESMNSGKS 856
>gi|238879474|gb|EEQ43112.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 399
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 12/188 (6%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
T+F +LS I L+ F +G V R+I T + +G Y++F+ + A+
Sbjct: 169 TLFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFESKSAAEKALEE 228
Query: 77 LNGQKLLGIPIIV-------QPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITED 129
+ G+++ G PI + +++ +RA + P L+IG+L FN D
Sbjct: 229 MQGKEIDGRPINLDMSTGKPHASKSNNDRAKQYGDSQSPPSD----TLFIGNLSFNANRD 284
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
L +F +G + + ++ PDT + KG+G++ F S D+AK A E +NG + GRP ++
Sbjct: 285 NLFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAALEAMNGEYIEGRPCRLD 344
Query: 190 TVTDRNES 197
T R+ +
Sbjct: 345 FSTPRDNT 352
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
P L++G L +NI + L+ FE G + +++++ TG+S+GYG++ F S A+KA
Sbjct: 167 PATLFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFESKSAAEKAL 226
Query: 174 EQLNGFELAGRPMKVGTVTDR 194
E++ G E+ GRP+ + T +
Sbjct: 227 EEMQGKEIDGRPINLDMSTGK 247
>gi|148666756|gb|EDK99172.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_f
[Mus musculus]
Length = 375
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFHEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+NG+K++G + V N A T P+ Q + T +++G L IT +
Sbjct: 60 AAALAAMNGRKIMGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTED 110
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++
Sbjct: 111 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 170
Query: 191 VTDR 194
T +
Sbjct: 171 ATRK 174
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F+ G++ D R++ T + KG ++ F D E+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + NT + + + +Y G + +TE
Sbjct: 157 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTE 216
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I I++ D KGY F+ F S + A A +NG + G +K
Sbjct: 217 QLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNGTTIEGHVVK 269
>gi|68473894|ref|XP_719050.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|68474099|ref|XP_718946.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440741|gb|EAL00044.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440849|gb|EAL00151.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
Length = 400
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 12/188 (6%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
T+F +LS I L+ F +G V R+I T + +G Y++F+ + A+
Sbjct: 169 TLFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFESKSAAEKALEE 228
Query: 77 LNGQKLLGIPIIV-------QPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITED 129
+ G+++ G PI + +++ +RA + P L+IG+L FN D
Sbjct: 229 MQGKEIDGRPINLDMSTGKPHASKSNNDRAKQYGDSQSPPSD----TLFIGNLSFNANRD 284
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
L +F +G + + ++ PDT + KG+G++ F S D+AK A E +NG + GRP ++
Sbjct: 285 NLFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAALEAMNGEYIEGRPCRLD 344
Query: 190 TVTDRNES 197
T R+ +
Sbjct: 345 FSTPRDNT 352
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
P L++G L +NI + L+ FE G + +++++ TG+S+GYG++ F S A+KA
Sbjct: 167 PATLFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFESKSAAEKAL 226
Query: 174 EQLNGFELAGRPMKVGTVTDR 194
E++ G E+ GRP+ + T +
Sbjct: 227 EEMQGKEIDGRPINLDMSTGK 247
>gi|328863696|gb|EGG12795.1| hypothetical protein MELLADRAFT_73862 [Melampsora larici-populina
98AG31]
Length = 477
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 2 RPAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIA 61
+P+ S PE + A ++ LS R+ L+E FS G V+ V++I ++ + G+
Sbjct: 94 QPSNSYTGHPEAKRAH-LYVGNLSPRVTEYMLQEIFSVAGSVQGVKIIP-DRNFQHGGLN 151
Query: 62 Y--IEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLY 118
Y +E+ + S A+ L G+K+ I V A +N N + G ++
Sbjct: 152 YGFVEYYEMRSAETALQTLGGRKIFDNEIRV--NWAYQNSQQNAVK----EDLSGHFHVF 205
Query: 119 IGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
+G L + +D+L F FG + + ++M D ++G+S+GYGF+ F DA++A +NG
Sbjct: 206 VGDLSPEVNDDVLAKAFAAFGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNG 265
Query: 179 FELAGRPMKVGTVTDRNESVGGGP 202
L R ++V +N+ + G P
Sbjct: 266 EWLGSRAIRVNWANQKNQGMPGAP 289
>gi|358248652|ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycine max]
gi|255644669|gb|ACU22837.1| unknown [Glycine max]
Length = 411
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 17/197 (8%)
Query: 32 DLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQP 91
D+ +F S G + +V +T +T +F+GIA I FK + A+ L+G + G+ + +QP
Sbjct: 181 DIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRALALDGADMGGLFLKIQP 240
Query: 92 TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPD 151
+A + N + P G R+Y+G+L ++ITE+ LR F +I +++ +D +
Sbjct: 241 YKATR---ANKASDFAPEILEGYNRIYVGNLSWDITEEELRKFFNGC-EITSLRFGMDKE 296
Query: 152 TGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM----------KVGTVTDR--NESVG 199
TG +GY + F + K A L+ L GRP+ K GT T N + G
Sbjct: 297 TGEFRGYAHVDFSDSQSLKTAL-ALDQNVLFGRPVRISCAVPLKKKTGTHTSSTVNGANG 355
Query: 200 GGPSNLDTDEMERAGVD 216
PS+ +D ++ A D
Sbjct: 356 DKPSSTGSDRIDGADGD 372
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
+ Y+G + + TED +R FE G I + M P+TG+ +G ITF + AK+A
Sbjct: 167 KAYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRAL-A 225
Query: 176 LNGFELAGRPMKV 188
L+G ++ G +K+
Sbjct: 226 LDGADMGGLFLKI 238
>gi|296223620|ref|XP_002757701.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Callithrix
jacchus]
gi|403260488|ref|XP_003922703.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 375
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFHEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+NG+K++G + V N A T P+ Q + T +++G L IT +
Sbjct: 60 AAALAAMNGRKIMGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTED 110
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++
Sbjct: 111 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 170
Query: 191 VTDR 194
T +
Sbjct: 171 ATRK 174
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F+ G++ D R++ T + KG ++ F D E+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + NT + + + +Y G + +TE
Sbjct: 157 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTE 216
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I +++ V PD KGY F+ F+S + A A +NG + G +K
Sbjct: 217 QLMRQTFSPFGQI--MEIRVFPD----KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVK 269
>gi|380816028|gb|AFE79888.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
gi|383421175|gb|AFH33801.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
Length = 375
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFHEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+NG+K++G + V N A T P+ Q + T +++G L IT +
Sbjct: 60 AAALAAMNGRKIMGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTED 110
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++
Sbjct: 111 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 170
Query: 191 VTDR 194
T +
Sbjct: 171 ATRK 174
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F+ G++ D R++ T + KG ++ F D E+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + NT + + + +Y G + +TE
Sbjct: 157 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTE 216
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I +++ V PD KGY F+ F+S + A A +NG + G +K
Sbjct: 217 QLMRQTFSPFGQI--MEIRVFPD----KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVK 269
>gi|464252|sp|P20397.3|NUCL_XENLA RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|64937|emb|CAA44805.1| nucleolin [Xenopus laevis]
Length = 651
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 17/179 (9%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+ERD+RT+F + +L+E F + +D+R+ T K KGIAY+EF + +
Sbjct: 320 KERDSRTLFVKNIPYSTTVEELQEIFEN---AKDIRIPT-GKDGSNKGIAYVEFSNEDEA 375
Query: 72 PLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR-LYIGSLHFNITED 129
A+ G ++ G I V T + +GN +G G + L + +L ++ TED
Sbjct: 376 NKALEEKQGAEIEGRSIFVDFTGEKSQNSGNK------KGPEGDSKVLVVNNLSYSATED 429
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
LR +FE + + + GR+KG+ FI F SA+DAK A + N E+ GR +++
Sbjct: 430 SLREVFEKA-----TSIRIPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRL 483
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 87/169 (51%), Gaps = 18/169 (10%)
Query: 33 LEEFFSSVG-KVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQP 91
L EFFS ++D+R+ K Y++F E V A+ L G+K+LG + ++
Sbjct: 253 LREFFSKKNLTIQDIRIGNSKK------FGYVDFSSEEEVEKALKLTGKKILGTEVKIEK 306
Query: 92 TQA-EKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDP 150
A +KN+ T N + R + L++ ++ ++ T + L+ IFE +I++
Sbjct: 307 AMAFDKNK---TAENKKERDS---RTLFVKNIPYSTTVEELQEIFE---NAKDIRIPTGK 357
Query: 151 DTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVG 199
D G +KG ++ F + D+A KA E+ G E+ GR + V +++++ G
Sbjct: 358 D-GSNKGIAYVEFSNEDEANKALEEKQGAEIEGRSIFVDFTGEKSQNSG 405
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E D++ + LS L E F +R I N+ R KG A+IEF E
Sbjct: 411 EGDSKVLVVNNLSYSATEDSLREVFEKATSIR----IPQNQGRA-KGFAFIEFSSAEDAK 465
Query: 73 LAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDML 131
AM N ++ G I ++ +Q + G + Q + L++ L + TE+ L
Sbjct: 466 DAMDSCNNTEIEGRSIRLEFSQGGGPQGGGRGGSAQSK------TLFVRGLSEDTTEETL 519
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHS 165
+ F+ G + N +++ D DTG SKG+GF+ F +
Sbjct: 520 KEAFD--GSV-NARIVTDRDTGASKGFGFVDFST 550
>gi|188219593|ref|NP_071320.2| nucleolysin TIA-1 isoform p40 isoform 1 [Homo sapiens]
gi|114577932|ref|XP_001141475.1| PREDICTED: uncharacterized protein LOC459303 isoform 1 [Pan
troglodytes]
gi|397521826|ref|XP_003830987.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Pan paniscus]
gi|119620229|gb|EAW99823.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_a [Homo sapiens]
gi|410254976|gb|JAA15455.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298558|gb|JAA27879.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353837|gb|JAA43522.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 375
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFHEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+NG+K++G + V N A T P+ Q + T +++G L IT +
Sbjct: 60 AAALAAMNGRKIMGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTED 110
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++
Sbjct: 111 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 170
Query: 191 VTDR 194
T +
Sbjct: 171 ATRK 174
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F+ G++ D R++ T + KG ++ F D E+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + NT + + + +Y G + +TE
Sbjct: 157 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTE 216
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I +++ V PD KGY F+ F+S + A A +NG + G +K
Sbjct: 217 QLMRQTFSPFGQI--MEIRVFPD----KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVK 269
>gi|291231691|ref|XP_002735797.1| PREDICTED: poly-U binding splicing factor 60KDa-like [Saccoglossus
kowalevskii]
Length = 528
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 37/261 (14%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
++ ++ +R +++ F G ++++ L T + KG A++E+ PE+ LA+ +
Sbjct: 133 VYVGSINFELREDTIKQAFLPFGPIKNINLSWDPVTMKHKGFAFVEYDLPEAAQLALEQM 192
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQP------RGTGGPMRLYIGSLHFNITEDML 131
NG + G I V R N +P QP R+Y+ S+H +++E+ +
Sbjct: 193 NGVMIGGRNIKV-------GRPSN-MPQAQPIIDQVMEEAKQYNRIYVASVHHDLSEEDI 244
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTV 191
+ +FE FGKI L D + KGYGFI + A+ A +N F+L G+ ++VG
Sbjct: 245 KSVFEAFGKIKMCMLSTDSIPSKHKGYGFIEYERNQSAQDAIASMNLFDLGGQYLRVGRA 304
Query: 192 TDRNESVGG--GPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQ 249
D + G P L + LM + + P+ S+ L Q
Sbjct: 305 LDAVAGITGSAAPPALPSQS---------------LMPNIVTAS-----PSGFSSPGLFQ 344
Query: 250 NAILNSSTPQVSSSTAPPIAT 270
A+L S+ P V + P T
Sbjct: 345 QAVLASNAPGVITGVTPAKTT 365
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS++F + ED ++ F PFG I NI L DP T + KG+ F+ + + A+ A EQ
Sbjct: 132 RVYVGSINFELREDTIKQAFLPFGPIKNINLSWDPVTMKHKGFAFVEYDLPEAAQLALEQ 191
Query: 176 LNGFELAGRPMKVG 189
+NG + GR +KVG
Sbjct: 192 MNGVMIGGRNIKVG 205
>gi|226500040|ref|NP_001150056.1| LOC100283683 [Zea mays]
gi|195636346|gb|ACG37641.1| nucleolysin TIAR [Zea mays]
Length = 421
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E F S+G V +LI K+
Sbjct: 57 IEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS--- 113
Query: 59 GIAYIEFKDPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
+I++ D LA + LNG++L G PI V N A + P T G +
Sbjct: 114 -FGFIDYYDRRYAALAILSLNGRQLYGQPIKV-------NWAYTSTPR---EDTSGHFNI 162
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F + + ++M D TGRS+G+GF++F + DA+ A LN
Sbjct: 163 FVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLN 222
Query: 178 GFELAGRPMKVGTVT 192
G L R ++ T
Sbjct: 223 GKWLGNRQIRCNWAT 237
>gi|71000291|ref|XP_754840.1| nucleolin protein Nsr1 [Aspergillus fumigatus Af293]
gi|66852477|gb|EAL92802.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus Af293]
Length = 546
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 15/196 (7%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF------KDPESVP 72
+F LS + L + F S G++ VR++T + R +G Y+E+ +
Sbjct: 304 LFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGRSRGFGYVEYVNAADAAKAYNAK 363
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKN--RAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
++G+K+ +P N RA N + + L++G++ F+ ED
Sbjct: 364 KDTEIDGRKINLDYATGRPANNNNNQDRAQARARNFGDQTSPESDTLFVGNIPFSANEDS 423
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
+ +F G I I+L DP++GR KG+G++ F S D+A++A LNG EL GRP+++
Sbjct: 424 VSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQAFNDLNGAELNGRPVRLDF 483
Query: 191 VTDRNESVGGGPSNLD 206
T R PSN D
Sbjct: 484 STPR-------PSNGD 492
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%)
Query: 111 TGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAK 170
+G L++G+L +N+ E+ LR FE FG++ ++++ D D+GRS+G+G++ + +A DA
Sbjct: 298 SGASANLFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGRSRGFGYVEYVNAADAA 357
Query: 171 KAQEQLNGFELAGRPMKVGTVTDR 194
KA E+ GR + + T R
Sbjct: 358 KAYNAKKDTEIDGRKINLDYATGR 381
>gi|159127852|gb|EDP52967.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus A1163]
Length = 546
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 15/196 (7%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF------KDPESVP 72
+F LS + L + F S G++ VR++T + R +G Y+E+ +
Sbjct: 304 LFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGRSRGFGYVEYVNAADAAKAYNAK 363
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKN--RAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
++G+K+ +P N RA N + + L++G++ F+ ED
Sbjct: 364 KDTEIDGRKINLDYATGRPANNNNNQDRAQARARNFGDQTSPESDTLFVGNIPFSANEDS 423
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
+ +F G I I+L DP++GR KG+G++ F S D+A++A LNG EL GRP+++
Sbjct: 424 VSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQAFNDLNGAELNGRPVRLDF 483
Query: 191 VTDRNESVGGGPSNLD 206
T R PSN D
Sbjct: 484 STPR-------PSNGD 492
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%)
Query: 111 TGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAK 170
+G L++G+L +N+ E+ LR FE FG++ ++++ D D+GRS+G+G++ + +A DA
Sbjct: 298 SGASANLFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGRSRGFGYVEYVNAADAA 357
Query: 171 KAQEQLNGFELAGRPMKVGTVTDR 194
KA E+ GR + + T R
Sbjct: 358 KAYNAKKDTEIDGRKINLDYATGR 381
>gi|241622203|ref|XP_002408913.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215503069|gb|EEC12563.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 266
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 16/187 (8%)
Query: 3 PAYSDDLSPE--ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGI 60
P + PE +++ARTIF L + L FF+ G + VR + + +
Sbjct: 50 PKPQKNFPPESPDKEARTIFVGNLPVTASEKPLRRFFNQYGAIESVRFRSSLHSSKQNVN 109
Query: 61 AYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIG 120
AY+ FK ESV A+ NG LLG I V +R G P + R + +++G
Sbjct: 110 AYVVFKQKESVDKALVANGSLLLGNHIRV-------DRVGKK-PQVDDRKS-----VFVG 156
Query: 121 SLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFE 180
+L + ++ L F G++ ++++ D +TG KG+GF+TF D A A E ++G
Sbjct: 157 NLPHEVQDEELWNCFSECGQVTGVRVIRDRETGMGKGFGFVTFSKLDAAALALE-MSGIH 215
Query: 181 LAGRPMK 187
++GRP++
Sbjct: 216 MSGRPIR 222
>gi|326531842|dbj|BAK01297.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 291
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 17/195 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L E F S+G V +LI K+
Sbjct: 54 IEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKS---- 109
Query: 59 GIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
++++ D LA+ LNG++L G PI V A R T G +
Sbjct: 110 SFGFVDYYDRRYAALAIVSLNGRQLFGQPIKVNWAYASTQR----------EDTSGHFNI 159
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F + + ++M D +GRS+G+GF++F + DA+ A +LN
Sbjct: 160 FVGDLCPEVTDAALFVFFSAYSTCSDARVMWDQQSGRSRGFGFVSFRNQQDAQTAINELN 219
Query: 178 GFELAGRPMKVGTVT 192
G L R ++ T
Sbjct: 220 GKWLGNRQIRCNWAT 234
>gi|58865762|ref|NP_001012096.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|56268852|gb|AAH87064.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|149036619|gb|EDL91237.1| rCG56007, isoform CRA_c [Rattus norvegicus]
Length = 375
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFHEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+NG+K++G + V N A T P+ Q + T +++G L IT +
Sbjct: 60 AAALAAMNGRKIMGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTED 110
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++
Sbjct: 111 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 170
Query: 191 VTDR 194
T +
Sbjct: 171 ATRK 174
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F+ G++ D R++ T + KG ++ F D E+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + NT + + + G +Y G + +TE
Sbjct: 157 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPGNCTVYCGGVTSGLTE 216
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I I++ D KGY FI F S + A A +NG + G +K
Sbjct: 217 QLMRQTFSPFGQIMEIRVFPD------KGYSFIRFSSHESAAHAIVSVNGTTIEGHVVK 269
>gi|67624203|ref|XP_668384.1| RNA-binding protein SiahBP [Cryptosporidium hominis TU502]
gi|54659576|gb|EAL38146.1| RNA-binding protein SiahBP [Cryptosporidium hominis]
Length = 615
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 41/213 (19%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
I+ L + DL++ F S G + ++ + + R KG +IE+ ES +A+ +
Sbjct: 214 IYVGSLDYSLNEADLKQVFGSFGPIVNIDM--PREGNRSKGFCFIEYTSQESAEMALATM 271
Query: 78 NGQKLLGIPIIV-QPTQAEKNRAGNTL--------------PNL---------------- 106
N L G PI V +PT A + + PN+
Sbjct: 272 NRFVLKGRPIRVGRPTNAASSNGNQSGSGGIGGGGSGNVINPNIAVFNNNHITHQNHQIQ 331
Query: 107 --QPRGTG----GPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDT-GRSKGYG 159
GTG R+YIGS+ ++ T D LR IF+ FG I + QL+ + G +GYG
Sbjct: 332 SETTHGTGIATHSQNRIYIGSVPYSFTTDDLRHIFKTFGVILSCQLIPSIEKPGTHRGYG 391
Query: 160 FITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
FI F +AD AK A E +NGFE+ G+ +KV T
Sbjct: 392 FIEFGTADQAKLAIETMNGFEVGGKQLKVNVAT 424
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 108 PRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTG-RSKGYGFITFHSA 166
PR + R+Y+GSL +++ E L+ +F FG I NI + P G RSKG+ FI + S
Sbjct: 205 PRQSSQISRIYVGSLDYSLNEADLKQVFGSFGPIVNIDM---PREGNRSKGFCFIEYTSQ 261
Query: 167 DDAKKAQEQLNGFELAGRPMKVGTVTDRNESVG 199
+ A+ A +N F L GRP++VG T+ S G
Sbjct: 262 ESAEMALATMNRFVLKGRPIRVGRPTNAASSNG 294
>gi|402078039|gb|EJT73388.1| nuclear localization sequence binding protein [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 499
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGL 77
T+F LS + L+E F G+V R+IT +T R KG Y++F P A
Sbjct: 254 TLFVGSLSWNVDDDMLKEEFKFCGEVVSARVITDRETGRSKGFGYVDFASPADAEKAHAE 313
Query: 78 NGQKLLG---IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGI 134
+ I + ++ N + + + L++G+L F+ ED++
Sbjct: 314 KQGAFIDGRQIKVDFSTGKSNNNDSADRAKKFGDVTSPESDTLFVGNLPFDADEDVVSEF 373
Query: 135 FEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
F +I +++L D ++GR KG+G+++F+S +DAK A QL+G + GRP ++
Sbjct: 374 FGSVAEIKSLRLPTDQESGRRKGFGYVSFNSVEDAKSAFTQLSGQSINGRPCRL 427
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 51/75 (68%)
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
P L++GSL +N+ +DML+ F+ G++ + +++ D +TGRSKG+G++ F S DA+KA
Sbjct: 252 PATLFVGSLSWNVDDDMLKEEFKFCGEVVSARVITDRETGRSKGFGYVDFASPADAEKAH 311
Query: 174 EQLNGFELAGRPMKV 188
+ G + GR +KV
Sbjct: 312 AEKQGAFIDGRQIKV 326
>gi|317027210|ref|XP_003188595.1| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 536
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 3 PAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY 62
P S P + +F LS + L+ F S G++ VR++T T R +G Y
Sbjct: 271 PKKSKTEDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGY 330
Query: 63 IEFKDPESVPLAMGLNGQK-------------LLGIPIIVQPTQAEKNRAGNTLPNLQPR 109
+E+ + +V A +K G P K+RA + +
Sbjct: 331 VEYTN--AVDAAKAFEAKKGAEIDGRVINLDYATGRPANKDQQGGFKDRANARARSFGDQ 388
Query: 110 GTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDA 169
+ L++G+L F+ ED + +F G I I+L DPD+GR KG+G++ + S D+A
Sbjct: 389 ASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEA 448
Query: 170 KKAQEQLNGFELAGRPMKVGTVTDR 194
+ A +L G +L GRP+++ T R
Sbjct: 449 RAAFNELQGADLLGRPVRLDFSTPR 473
>gi|317027208|ref|XP_001400395.2| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 539
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 3 PAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY 62
P S P + +F LS + L+ F S G++ VR++T T R +G Y
Sbjct: 274 PKKSKTEDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGY 333
Query: 63 IEFKDPESVPLAMGLNGQK-------------LLGIPIIVQPTQAEKNRAGNTLPNLQPR 109
+E+ + +V A +K G P K+RA + +
Sbjct: 334 VEYTN--AVDAAKAFEAKKGAEIDGRVINLDYATGRPANKDQQGGFKDRANARARSFGDQ 391
Query: 110 GTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDA 169
+ L++G+L F+ ED + +F G I I+L DPD+GR KG+G++ + S D+A
Sbjct: 392 ASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEA 451
Query: 170 KKAQEQLNGFELAGRPMKVGTVTDR 194
+ A +L G +L GRP+++ T R
Sbjct: 452 RAAFNELQGADLLGRPVRLDFSTPR 476
>gi|307177474|gb|EFN66601.1| Poly(U)-binding-splicing factor half pint [Camponotus floridanus]
Length = 510
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 117/253 (46%), Gaps = 8/253 (3%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
++ +S ++ + + F G ++ + + T++ KG A++E++ PE+ LA+ +
Sbjct: 40 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 99
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG + G I V + +A + + + R+YI S+H ++TED ++ +FE
Sbjct: 100 NGVMIGGRNIKVVGRPSNMPQAQSVIDEITEESKHY-NRIYIASIHQDLTEDDIKSVFEA 158
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES 197
FG I +L R KGYGFI + + A +A +N F+L G+ ++VG +
Sbjct: 159 FGPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITPPNA 218
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAE-GTGLELPPAAASALNLAQNAILNSS 256
+ G PS A AT ++Q M +A L L A+A ILN +
Sbjct: 219 LMGPPSGTSMMPTAAAVAAAAATAKIQAMDAVASNAVALGLTKLGATA-----PPILNQT 273
Query: 257 TPQVSSSTAPPIA 269
P V T P A
Sbjct: 274 LPGVVRPTIAPAA 286
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F + ED +R F PFG I +I + DP T + KG+ F+ + + A+ A EQ
Sbjct: 39 RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQ 98
Query: 176 LNGFELAGRPMKV 188
+NG + GR +KV
Sbjct: 99 MNGVMIGGRNIKV 111
>gi|297791731|ref|XP_002863750.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
gi|297309585|gb|EFH40009.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
Length = 400
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 15 DARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLA 74
+ +TI+ L + L FSS G++ V++I T +G ++EF +
Sbjct: 89 ENKTIWVGDLLHWMDENYLNSSFSSAGEISSVKVIRNKHTGLTEGYGFVEFVSHDVAEKV 148
Query: 75 MG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRG 133
+ LNG+ +L + A + L N G + +++G L +T+ ML
Sbjct: 149 LQELNGEAMLNAEQPFRLNWASFSTGEKRLEN------GPDLSIFVGDLAPEVTDTMLEQ 202
Query: 134 IF-EPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
IF E + + N ++++D +TGRSKGYGF+ F + KA ++NG + GR M++G T
Sbjct: 203 IFSEKYPSVKNAKVVIDGNTGRSKGYGFVRFGDDSERSKAMLEMNGVKCCGRAMRIGPAT 262
Query: 193 DRNES 197
R S
Sbjct: 263 PRKPS 267
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 25/163 (15%)
Query: 18 TIFCMQLSQRIRTRDLEEFFS-SVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM- 75
+IF L+ + LE+ FS V++ +++ T R KG ++ F D AM
Sbjct: 185 SIFVGDLAPEVTDTMLEQIFSEKYPSVKNAKVVIDGNTGRSKGYGFVRFGDDSERSKAML 244
Query: 76 GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIF 135
+NG K G + + P K P + L ++T+D LR F
Sbjct: 245 EMNGVKCCGRAMRIGPATPRK-----------------PSGYHQQGLDSSVTDDDLRQPF 287
Query: 136 EPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
+G+I ++++ V KG GFI F + ++A++A E+LNG
Sbjct: 288 AGYGEIVSVKIPV------GKGCGFIQFVNRENAEEALEKLNG 324
>gi|449488383|ref|XP_002188190.2| PREDICTED: nucleolysin TIA-1-like, partial [Taeniopygia guttata]
Length = 537
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFSEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+NG+K++G + V N A T P+ Q + T +++G L IT +
Sbjct: 60 AAALAAMNGRKIMGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTED 110
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++
Sbjct: 111 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 170
Query: 191 VTDR 194
T +
Sbjct: 171 ATRK 174
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 28/180 (15%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F+ G++ D R++ T + KG ++ F D E+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 76 GLNGQKLLGIPIIVQ--------PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
G GQ L G I P ++R+G L PR ++ + +
Sbjct: 157 G--GQWLGGRQIRTNWATRKPPAPKSTFESRSGP----LSPRVPDEAVQSVLPA-----P 205
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
E ++R F PFG+I I++ D KGY F+ F S + A A +NG + G +K
Sbjct: 206 EQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNGTTIEGHVVK 259
>gi|301758210|ref|XP_002914948.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2 [Ailuropoda
melanoleuca]
gi|410954993|ref|XP_003984143.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Felis catus]
Length = 375
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFYEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+NG+K++G + V N A T P+ Q + T +++G L IT +
Sbjct: 60 AAALAAMNGRKIMGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTED 110
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++
Sbjct: 111 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 170
Query: 191 VTDR 194
T +
Sbjct: 171 ATRK 174
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F+ G++ D R++ T + KG ++ F D E+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + NT + + + +Y G + +TE
Sbjct: 157 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTE 216
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I +++ V PD KGY F+ F+S + A A +NG + G +K
Sbjct: 217 QLMRQTFSPFGQI--MEIRVFPD----KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVK 269
>gi|344283909|ref|XP_003413713.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Loxodonta
africana]
Length = 375
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFYEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+NG+K++G + V N A T P+ Q + T +++G L IT +
Sbjct: 60 AAALAAMNGRKIMGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTED 110
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++
Sbjct: 111 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 170
Query: 191 VTDR 194
T +
Sbjct: 171 ATRK 174
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F+ G++ D R++ T + KG ++ F D E+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + NT + + + +Y G + +TE
Sbjct: 157 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTE 216
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I +++ V PD KGY F+ F+S + A A +NG + G +K
Sbjct: 217 QLMRQTFSPFGQI--MEIRVFPD----KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVK 269
>gi|156373168|ref|XP_001629405.1| predicted protein [Nematostella vectensis]
gi|156216405|gb|EDO37342.1| predicted protein [Nematostella vectensis]
Length = 817
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 8/179 (4%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
E D R +F L I L + FS +G+V DVR++ N R KG AY+EF + +V
Sbjct: 596 ESSDPRKVFISNLLFSITEDHLRDKFSKLGEVLDVRIVK-NMAGRSKGYAYVEFNNESTV 654
Query: 72 PLAMGLNGQKLLGIPIIVQP-TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
A+ ++ +K+ G P+ + P KN P + T L++ +L F+ E
Sbjct: 655 QAALAMDREKMEGRPMFISPCVDKAKNPTTFKFPTSLDKHT-----LFVSNLPFDAKESE 709
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
+ +F G + ++L+ + G+ KGYG++ + A A L+ E+ GR + V
Sbjct: 710 IEELFSKHGVVKQVRLVTN-RAGKPKGYGYVEYEQESSASTAVLTLDKTEVKGRTISVA 767
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 11 PEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPES 70
P D T+F L + ++EE FS G V+ VRL+T N+ + KG Y+E++ S
Sbjct: 688 PTSLDKHTLFVSNLPFDAKESEIEELFSKHGVVKQVRLVT-NRAGKPKGYGYVEYEQESS 746
Query: 71 VPLA-MGLNGQKLLGIPIIV 89
A + L+ ++ G I V
Sbjct: 747 ASTAVLTLDKTEVKGRTISV 766
>gi|448123237|ref|XP_004204643.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|448125519|ref|XP_004205201.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358249834|emb|CCE72900.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358350182|emb|CCE73461.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
Length = 505
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 16/190 (8%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
T+F +LS I L+ F +G V R+I + + +G Y++F+ A+
Sbjct: 292 TLFVGRLSWNIDDEWLQREFEPLGGVTGARVIYEKASGKSRGYGYVDFETKSQAQHALKE 351
Query: 77 LNGQKLLGIPIIV-------QPTQAEKNRAGN--TLPNLQPRGTGGPMRLYIGSLHFNIT 127
G+++ G PI + +P+ +RA +P+ P T L+IG+L FN
Sbjct: 352 YQGREIDGRPINLDMSESKPRPSNPRFDRAKQFGDVPSA-PSST-----LFIGNLSFNAQ 405
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
D L IF +G++ + ++ PDT + KG+G+I F + D+AK A E LNG + GRP +
Sbjct: 406 RDNLYDIFGEYGRVVSCRMPTHPDTQQPKGFGYIEFSTVDEAKAALEALNGEYVEGRPCR 465
Query: 188 VGTVTDRNES 197
+ T R S
Sbjct: 466 LDFSTPRENS 475
>gi|307109347|gb|EFN57585.1| hypothetical protein CHLNCDRAFT_143267 [Chlorella variabilis]
Length = 521
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 9/177 (5%)
Query: 16 ARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM 75
+RTIF L + EFF+ G + +VR+ T R KG A+++F++ E A
Sbjct: 258 SRTIFMKNLPWAAEEDTIREFFAECGPIAEVRIAYDRDTGRAKGFAHVQFEELEGAAKAT 317
Query: 76 GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR-GI 134
L+G+ L+ + ++ T + R P T +++ ++ ED +R +
Sbjct: 318 ALSGESLMDRELYIESTTERQQR----TPGENRFATSDGTTIFVKGYDSSLGEDEVRRQL 373
Query: 135 FEPFGKID---NIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
E FG++ +++L D DTG KG GFI F S D KA E L+G E+AG +KV
Sbjct: 374 TEAFGEVGAVVSVRLPTDRDTGELKGIGFIEFESTDAKHKAVE-LDGSEVAGGWIKV 429
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 113 GPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKA 172
G +++ +L + ED +R F G I +++ D DTGR+KG+ + F + A KA
Sbjct: 257 GSRTIFMKNLPWAAEEDTIREFFAECGPIAEVRIAYDRDTGRAKGFAHVQFEELEGAAKA 316
Query: 173 QEQLNGFELAGRPMKVGTVTDRNESVGG 200
L+G L R + + + T+R + G
Sbjct: 317 T-ALSGESLMDRELYIESTTERQQRTPG 343
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 15 DARTIFCM----QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPES 70
D TIF L + R L E F VG V VRL T T KGI +IEF+ ++
Sbjct: 351 DGTTIFVKGYDSSLGEDEVRRQLTEAFGEVGAVVSVRLPTDRDTGELKGIGFIEFESTDA 410
Query: 71 VPLAMGLNGQKLLGIPIIVQP 91
A+ L+G ++ G I V P
Sbjct: 411 KHKAVELDGSEVAGGWIKVDP 431
>gi|328696967|ref|XP_001951881.2| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Acyrthosiphon pisum]
Length = 603
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 91/172 (52%), Gaps = 2/172 (1%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
++ +S ++ +++ FS G ++ + + T++ KG A++E++ PE+ LA+ +
Sbjct: 143 VYVGSISFELKEDSIKQAFSPFGCIKSINMSWDPITQKHKGFAFVEYEIPEAAQLALEQM 202
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG L G I V + +A + + +Q R+Y+ S+H ++TED ++ +FE
Sbjct: 203 NGVMLGGRNIKVVGRPSNMPQAQSVIDEIQEEAKQY-NRIYVASIHPDLTEDDIKSVFEA 261
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FG I +L R +GYGFI + A +A +N F+L G+ ++VG
Sbjct: 262 FGPIRTCKLAQGSTPNRHRGYGFIEYEGRQAAIEAISSMNLFDLGGQYLRVG 313
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F + ED ++ F PFG I +I + DP T + KG+ F+ + + A+ A EQ
Sbjct: 142 RVYVGSISFELKEDSIKQAFSPFGCIKSINMSWDPITQKHKGFAFVEYEIPEAAQLALEQ 201
Query: 176 LNGFELAGRPMKV 188
+NG L GR +KV
Sbjct: 202 MNGVMLGGRNIKV 214
>gi|149244172|ref|XP_001526629.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449023|gb|EDK43279.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 510
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK-DPESV 71
E + T+F +LS I L++ F +G V R+I T + +G Y++FK +
Sbjct: 256 EEEGATLFVGRLSWNIDDDWLKKEFEHLGDVIGARVIMERATGKSRGYGYVDFKTKAAAE 315
Query: 72 PLAMGLNGQKLLGIPIIVQPT----QAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
+ G+++ G PI + + A K AG+ + L+IG+L FN
Sbjct: 316 KALAEMQGKEIDGRPINLDMSTGKPHASKANAGDRARQFGDSQSPPSDTLFIGNLSFNAN 375
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
D L IF +G + + ++ PDT + KG+G++ F S D+AK A E LNG + RP +
Sbjct: 376 RDSLFEIFGEYGTVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGEYIENRPCR 435
Query: 188 VGTVTDRN 195
+ T R+
Sbjct: 436 LDFSTPRD 443
>gi|21593280|gb|AAM65229.1| oligouridylate binding protein, putative [Arabidopsis thaliana]
Length = 427
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 17/195 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E F+S G V +LI +K+
Sbjct: 41 LEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKS---- 96
Query: 59 GIAYIEFKDPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
++ + D S LA + LNG+ L G PI V A R T +
Sbjct: 97 SYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYATGQR----------EDTSSHFNI 146
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F F + ++M D TGRS+G+GF++F + DA+ A ++N
Sbjct: 147 FVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMN 206
Query: 178 GFELAGRPMKVGTVT 192
G L+ R ++ T
Sbjct: 207 GKWLSSRQIRCNWAT 221
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 73/194 (37%), Gaps = 31/194 (15%)
Query: 4 AYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
AY+ + IF LS + L + FS D R++ KT R +G ++
Sbjct: 131 AYATGQREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFV 190
Query: 64 EFKDPESVPLAMG-LNGQKLLGIPI----------------------IVQPTQAEKNRAG 100
F++ + A+ +NG+ L I +V+ T
Sbjct: 191 SFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGK 250
Query: 101 NTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGK--IDNIQLMVDPDTGRSKGY 158
TL P +Y+G+L +T+ L F G I+ +++ R KG+
Sbjct: 251 ETLNEETPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQ------RDKGF 304
Query: 159 GFITFHSADDAKKA 172
GF+ +++ +A A
Sbjct: 305 GFVRYNTHPEAALA 318
>gi|426223384|ref|XP_004005855.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Ovis aries]
Length = 375
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFYEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+NG+K++G + V N A T P+ Q + T +++G L IT +
Sbjct: 60 AAALAAMNGRKIMGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTED 110
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++
Sbjct: 111 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 170
Query: 191 VTDR 194
T +
Sbjct: 171 ATRK 174
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F+ G++ D R++ T + KG ++ F D E+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + NT + + + +Y G + +TE
Sbjct: 157 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTE 216
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I I++ D KGY F+ F+S + A A +NG + G +K
Sbjct: 217 QLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVK 269
>gi|15231783|ref|NP_188026.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9294635|dbj|BAB02974.1| RNA binding protein nucleolysin; oligouridylate binding protein
[Arabidopsis thaliana]
gi|22655004|gb|AAM98093.1| AT3g14100/MAG2_5 [Arabidopsis thaliana]
gi|28416511|gb|AAO42786.1| AT3g14100/MAG2_5 [Arabidopsis thaliana]
gi|332641947|gb|AEE75468.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 427
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 17/195 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E F+S G V +LI +K+
Sbjct: 41 LEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKS---- 96
Query: 59 GIAYIEFKDPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
++ + D S LA + LNG+ L G PI V A R T +
Sbjct: 97 SYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYATGQR----------EDTSSHFNI 146
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F F + ++M D TGRS+G+GF++F + DA+ A ++N
Sbjct: 147 FVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMN 206
Query: 178 GFELAGRPMKVGTVT 192
G L+ R ++ T
Sbjct: 207 GKWLSSRQIRCNWAT 221
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 73/194 (37%), Gaps = 31/194 (15%)
Query: 4 AYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
AY+ + IF LS + L + FS D R++ KT R +G ++
Sbjct: 131 AYATGQREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFV 190
Query: 64 EFKDPESVPLAMG-LNGQKLLGIPI----------------------IVQPTQAEKNRAG 100
F++ + A+ +NG+ L I +V+ T
Sbjct: 191 SFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGK 250
Query: 101 NTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGK--IDNIQLMVDPDTGRSKGY 158
TL P +Y+G+L +T+ L F G I+ +++ R KG+
Sbjct: 251 ETLNEETPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQ------RDKGF 304
Query: 159 GFITFHSADDAKKA 172
GF+ +++ +A A
Sbjct: 305 GFVRYNTHPEAALA 318
>gi|354491765|ref|XP_003508025.1| PREDICTED: nucleolysin TIAR-like [Cricetulus griseus]
Length = 285
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFHEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+NG+K++G + V N A T P+ Q + T +++G L IT +
Sbjct: 60 AAALAAMNGRKIMGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTED 110
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++
Sbjct: 111 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 170
Query: 191 VTDR 194
T +
Sbjct: 171 ATRK 174
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 16/153 (10%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F+ G++ D R++ T + KG ++ F D E+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + NT + + + +Y G + +TE
Sbjct: 157 GGQWLGGRQIRTNWATRKPPAPKSTYELNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLTE 216
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFI 161
++R F PFG+I +++ V PD KGY FI
Sbjct: 217 QLMRQTFSPFGQI--LEIRVFPD----KGYSFI 243
>gi|426201609|gb|EKV51532.1| hypothetical protein AGABI2DRAFT_189771 [Agaricus bisporus var.
bisporus H97]
Length = 469
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 18/198 (9%)
Query: 11 PEERDART-IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY--IEFKD 67
P E R ++ LS R+ L E F+ G V+ V++I ++ + G+ Y +E+ D
Sbjct: 9 PAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIP-DRNYQHGGLNYGFVEYMD 67
Query: 68 PESVPLAM-GLNGQKLLGIPIIVQ-PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
S A+ LNG+K+ I V Q ++N+ T G +++G L
Sbjct: 68 MRSAETALQTLNGRKIFDTEIRVNWAYQGQQNK----------EDTSGHYHVFVGDLSPE 117
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
+ +D+L F FG + + ++M D ++G+S+GYGF+ F DA++A +NG L R
Sbjct: 118 VNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRA 177
Query: 186 MKVGTVTDRNESVGGGPS 203
++V + + GG P+
Sbjct: 178 IRVNWANQKTQ--GGAPA 193
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 85/209 (40%), Gaps = 41/209 (19%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
+F LS + L + FS+ G + D R++ + + +G ++ F+D A+ +
Sbjct: 109 VFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 168
Query: 78 NGQKL---------------LGIPIIVQPTQAEKNRAGNTLP-NLQPRGTGGPMR----- 116
NG+ L G P + Q + + G P N Q GGP+
Sbjct: 169 NGEWLGSRAIRVNWANQKTQGGAPAVQQSPRPAGSTGGAPAPINFQ----GGPLSYESVV 224
Query: 117 ---------LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSAD 167
+Y+G+L T+ L +F+ G + I++ D +G+ F+ + +
Sbjct: 225 QQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQAD------RGFAFVKLDTHE 278
Query: 168 DAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
A A QL G + GRP+K DR +
Sbjct: 279 HAAMAIVQLQGQMVHGRPIKCSWGKDRAD 307
>gi|148666753|gb|EDK99169.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_c
[Mus musculus]
Length = 293
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 10 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFHEHRHA 67
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+NG+K++G + V N A T P+ Q + T +++G L IT +
Sbjct: 68 AAALAAMNGRKIMGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTED 118
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++
Sbjct: 119 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 178
Query: 191 VTDR 194
T +
Sbjct: 179 ATRK 182
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 16/153 (10%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F+ G++ D R++ T + KG ++ F D E+ M
Sbjct: 105 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 164
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + NT + + + +Y G + +TE
Sbjct: 165 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTE 224
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFI 161
++R F PFG+I I++ D KGY F+
Sbjct: 225 QLMRQTFSPFGQIMEIRVFPD------KGYSFV 251
>gi|255760011|ref|NP_001157551.1| nucleolysin TIA-1 isoform 3 [Mus musculus]
gi|23271442|gb|AAH23813.1| Tia1 protein [Mus musculus]
Length = 285
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFHEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+NG+K++G + V N A T P+ Q + T +++G L IT +
Sbjct: 60 AAALAAMNGRKIMGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTED 110
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++
Sbjct: 111 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 170
Query: 191 VTDR 194
T +
Sbjct: 171 ATRK 174
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 16/153 (10%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F+ G++ D R++ T + KG ++ F D E+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + NT + + + +Y G + +TE
Sbjct: 157 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTE 216
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFI 161
++R F PFG+I I++ D KGY F+
Sbjct: 217 QLMRQTFSPFGQIMEIRVFPD------KGYSFV 243
>gi|448520030|ref|XP_003868205.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis Co 90-125]
gi|380352544|emb|CCG22770.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis]
Length = 498
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 13/195 (6%)
Query: 2 RPAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIA 61
+ A S+ + +E A TIF +LS I L+ F + V R+I T + +G
Sbjct: 241 KKAKSESFTTDEEPA-TIFAGRLSWNIDDDWLKREFEHLEGVISARVIMERATGKSRGYG 299
Query: 62 YIEFKDPESVPLAMG-LNGQKLLGIPIIV-------QPTQAEKNRAGNTLPNLQPRGTGG 113
Y++F + A+ + G+++ G PI + T++ +RA P
Sbjct: 300 YVDFSSKSAAENAIAEMQGKEIDGRPINLDLSTGKPHATKSNNDRARQFGDQQSPPSDT- 358
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
L+IG+L FN D L +F +G + + +L PDT + KG+G++ F S D+AK A
Sbjct: 359 ---LFIGNLSFNANRDKLFEVFGEYGNVISCRLPTHPDTQQPKGFGYVQFSSVDEAKAAL 415
Query: 174 EQLNGFELAGRPMKV 188
E LNG L GRP ++
Sbjct: 416 EALNGEYLEGRPCRL 430
>gi|346319566|gb|EGX89167.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cordyceps militaris CM01]
Length = 450
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 10/188 (5%)
Query: 10 SPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPE 69
S E + R ++ L QR+ L + F + G V++V++I + F ++E+ DP
Sbjct: 63 SAPEPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFN-YGFVEYDDPG 121
Query: 70 SVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
+ AM LNG+++ I V + N +G T G +++G L + +
Sbjct: 122 AAERAMQTLNGRRVHQSEIRVN-WAYQSNTSGK-------EDTSGHFHIFVGDLSNEVND 173
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
++L F FG + ++M D TGRS+GYGF+ F +A+KA ++G L R ++
Sbjct: 174 EILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRC 233
Query: 189 GTVTDRNE 196
+ +
Sbjct: 234 NWANQKGQ 241
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 36/230 (15%)
Query: 4 AYSDDLSPEERDART--IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIA 61
AY + S +E + IF LS + L + FS+ G V + R++ KT R +G
Sbjct: 145 AYQSNTSGKEDTSGHFHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRGYG 204
Query: 62 YIEFKD-PESVPLAMGLNGQKL------------LGIPIIVQPTQAEKNRAGNTLP---- 104
++ F+D PE+ ++G+ L G P + Q + T P
Sbjct: 205 FVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGLTPTTPFGHH 264
Query: 105 NLQPRGTGG-----------PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTG 153
G G +Y+G+L T + + +F+ FG + + D
Sbjct: 265 QFPTHGVGSYDVILAQTPTWQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD---- 320
Query: 154 RSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPS 203
+G+ FI + ++A A Q+NG+ + GRP+K D+ + G P+
Sbjct: 321 --RGFAFIKMDTHENASMAICQMNGYNVNGRPLKCSWGKDKTSNQGFDPA 368
>gi|260827026|ref|XP_002608466.1| hypothetical protein BRAFLDRAFT_283159 [Branchiostoma floridae]
gi|229293817|gb|EEN64476.1| hypothetical protein BRAFLDRAFT_283159 [Branchiostoma floridae]
Length = 925
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 91/179 (50%), Gaps = 6/179 (3%)
Query: 13 ERDARTIFCMQLSQRIRT--RDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPES 70
+R+ R++F LS + + E FS G+V DVRL +K ++F+G Y+EFK+ +
Sbjct: 649 DRERRSVFVSNLSYSLHNPQDKMREVFSECGEVADVRLAFTSK-KKFRGFCYVEFKEESA 707
Query: 71 VPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
A+G + +++ G P+ V P R G+ Q +L++ +L + +T++
Sbjct: 708 AVKALGFDHKEVEGRPLFVSPCI--DKRKGDKFHGFQYATKLEKNKLFVSNLPYTVTKEA 765
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
L IF+ G + ++ MV +G+ KG ++ + A +A + +G + R ++V
Sbjct: 766 LENIFKQHGPLRGVR-MVTYRSGKPKGLAYVEYEDEQTASQAVLKTDGLMIGDRKIQVA 823
>gi|297829972|ref|XP_002882868.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
lyrata]
gi|297328708|gb|EFH59127.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 17/195 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E F+S G V +LI +K+
Sbjct: 43 LEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKS---- 98
Query: 59 GIAYIEFKDPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
++ + D S LA + LNG+ L G PI V A R T +
Sbjct: 99 SYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYATGQR----------EDTSSHFNI 148
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F F + ++M D TGRS+G+GF++F + DA+ A ++N
Sbjct: 149 FVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMN 208
Query: 178 GFELAGRPMKVGTVT 192
G L+ R ++ T
Sbjct: 209 GKWLSSRQIRCNWAT 223
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 73/194 (37%), Gaps = 31/194 (15%)
Query: 4 AYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
AY+ + IF LS + L + FS D R++ KT R +G ++
Sbjct: 133 AYATGQREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFV 192
Query: 64 EFKDPESVPLAMG-LNGQKLLGIPI----------------------IVQPTQAEKNRAG 100
F++ + A+ +NG+ L I +V+ T
Sbjct: 193 SFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGK 252
Query: 101 NTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGK--IDNIQLMVDPDTGRSKGY 158
TL P +Y+G+L +T+ L F G I+ +++ R KG+
Sbjct: 253 ETLNEEAPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQ------RDKGF 306
Query: 159 GFITFHSADDAKKA 172
GF+ +++ +A A
Sbjct: 307 GFVRYNTHPEAALA 320
>gi|345484300|ref|XP_003424998.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
half pint-like [Nasonia vitripennis]
Length = 605
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 120/253 (47%), Gaps = 5/253 (1%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
++ +S ++ + + F G ++ + + T++ KG A++E++ PE+ LA+ +
Sbjct: 124 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPATQKHKGFAFVEYEIPEAAQLALEQM 183
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG + G I V + +A + + + R+YI S+H ++TE+ ++ +FE
Sbjct: 184 NGVMIGGRNIKVVGRPSNMPQAQSVIDEITEESKHY-NRIYIASIHQDLTEEDIKSVFEA 242
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES 197
FG I +L R KGYGFI + S A +A +N F+L G+ ++VG +
Sbjct: 243 FGPITYCKLAQGSSPHRHKGYGFIEYESMQSALEAIASMNLFDLGGQYLRVGRAITPPNA 302
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAE-GTGLELPPAAASALNLAQNAILNSS 256
+ G PS A AT ++Q M +A L L A+A + A+
Sbjct: 303 LMGPPSGTSMMPTAAAVAAAAATAKIQAMDAVASNAVALGLSKLGAAATPILGTAMPGIV 362
Query: 257 TPQVSSST--APP 267
P +++ST APP
Sbjct: 363 RPTLAASTILAPP 375
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F + ED +R F PFG I +I + DP T + KG+ F+ + + A+ A EQ
Sbjct: 123 RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPATQKHKGFAFVEYEIPEAAQLALEQ 182
Query: 176 LNGFELAGRPMKV 188
+NG + GR +KV
Sbjct: 183 MNGVMIGGRNIKV 195
>gi|45383446|ref|NP_989687.1| nucleolysin TIAR isoform 1 [Gallus gallus]
gi|28883275|gb|AAO49721.1| TIAR [Gallus gallus]
Length = 388
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 30/204 (14%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLIT--CNKTRRFKGIAYIE 64
DD P RT++ LS+ + + + FS +G + ++IT + +RR + +
Sbjct: 3 DDGQP-----RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSSRRVNSVGFSV 57
Query: 65 FKDPESVPLAM--------------GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRG 110
+ + P +NG+K+LG + V N A T P+ Q +
Sbjct: 58 LQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKV-------NWA--TTPSSQKKD 108
Query: 111 TGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAK 170
T +++G L IT + ++ F PFGKI + +++ D TG+SKGYGF++F++ DA+
Sbjct: 109 TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAE 168
Query: 171 KAQEQLNGFELAGRPMKVGTVTDR 194
A + G L GR ++ T +
Sbjct: 169 NAIVHMGGQWLGGRQIRTNWATRK 192
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F LS I T D++ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 115 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 174
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + + NT ++ + + +Y G + +T+
Sbjct: 175 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 234
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I +++ V P+ KGY F+ F + + A A +NG + G +K
Sbjct: 235 QLMRQTFSPFGQI--MEIRVFPE----KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 287
>gi|134057335|emb|CAK44534.1| unnamed protein product [Aspergillus niger]
Length = 538
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 3 PAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY 62
P S P + +F LS + L+ F S G++ VR++T T R +G Y
Sbjct: 273 PKKSKTEDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGY 332
Query: 63 IEFKDPESVPLAMGLNGQK-------------LLGIPIIVQPTQAEKNRAGNTLPNLQPR 109
+E+ + +V A +K G P K+RA + +
Sbjct: 333 VEYTN--AVDAAKAFEAKKGAEIDGRVINLDYATGRPANKDQQGGFKDRANARARSFGDQ 390
Query: 110 GTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDA 169
+ L++G+L F+ ED + +F G I I+L DPD+GR KG+G++ + S D+A
Sbjct: 391 ASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEA 450
Query: 170 KKAQEQLNGFELAGRPMKVGTVTDR 194
+ A +L G +L GRP+++ T R
Sbjct: 451 RAAFNELQGADLLGRPVRLDFSTPR 475
>gi|407038416|gb|EKE39116.1| RNA-binding protein TIA-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 131/283 (46%), Gaps = 41/283 (14%)
Query: 6 SDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF 65
+D P +++++ + + + L FS VG V +++ +K+ G ++EF
Sbjct: 32 TDSSLPINANSKSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMR-DKSGVHAGYGFVEF 90
Query: 66 KDPESVPLAM-GLNGQKLLGIPIIVQPTQ-AEKNRAGNTLPNLQPRGTGGPMRLYIGSLH 123
D + A ++G+ + G + V + A++ GN ++++G L
Sbjct: 91 VDSTTARFAKDNMDGRVVYGRELKVNWSYTAQQENQGN-------------YKIFVGGLQ 137
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+ +D+L F+ FG++ + +++ TG+SKGYGF+TF +DA+ A + +NG +L G
Sbjct: 138 PEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEG 197
Query: 184 RPMKVGTVTD----------------RNES--------VGGGPSNLDTDEMERAGVDLGA 219
R +KV VT NE+ +G P N+++D++++ + G+
Sbjct: 198 RNIKVNWVTSNIASKTEQPKRSYDEINNETSSQNCTVYIGNIPKNVESDDLKQLLAEYGS 257
Query: 220 TGRLQL-MFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVS 261
++L K +A SA+ + I+N ST + S
Sbjct: 258 IEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIINGSTLRCS 300
>gi|432911999|ref|XP_004078817.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oryzias
latipes]
Length = 523
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 31/172 (18%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLG-------- 84
+ + F+ G ++ + + + T + KG A++E++ PE+ LA+ +LG
Sbjct: 116 IRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEMPEAAQLALEQMNSVVLGGRNIKVGR 175
Query: 85 -------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
PII Q AE+ RA N R+Y+ S+H +++++ ++ +FE
Sbjct: 176 PSNIGQAQPIIDQ--LAEEARAFN--------------RIYVASVHPDLSDEDIKSVFEA 219
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FG+I + L +P TGR KGYGFI + + A +N F+L G+ ++VG
Sbjct: 220 FGRIKSCMLAREPTTGRHKGYGFIEYDKPQSSLDAVASMNLFDLGGQYLRVG 271
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+++ + ED +R F PFG I +I + D T + KG+ F+ + + A+ A EQ
Sbjct: 101 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEMPEAAQLALEQ 160
Query: 176 LNGFELAGRPMKVG 189
+N L GR +KVG
Sbjct: 161 MNSVVLGGRNIKVG 174
>gi|383861059|ref|XP_003706004.1| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Megachile rotundata]
Length = 592
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 6/257 (2%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
++ +S ++ + + F G ++ + + T++ KG A++E++ PE+ LA+ +
Sbjct: 122 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 181
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG + G I V + +A + + + R+YI S+H ++TED ++ +FE
Sbjct: 182 NGVMIGGRNIKVVGRPSNMPQAQSVIDEITEESKHY-NRIYIASIHQDLTEDDIKSVFEA 240
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES 197
FG I +L R KGYGFI + + A +A +N F+L G+ ++VG +
Sbjct: 241 FGPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITPPNA 300
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGT---GL-ELPPAAASALNLAQNAIL 253
+ G PS A AT ++Q M +A GL +L AA LN A I+
Sbjct: 301 LMGPPSGTSMMPTAAAVAAAAATAKIQAMDAVASNAVALGLTKLGAAAPPILNQALPGIV 360
Query: 254 NSSTPQVSSSTAPPIAT 270
+ + P IAT
Sbjct: 361 RPTIAPATMMAPPTIAT 377
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F + ED +R F PFG I +I + DP T + KG+ F+ + + A+ A EQ
Sbjct: 121 RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQ 180
Query: 176 LNGFELAGRPMKV 188
+NG + GR +KV
Sbjct: 181 MNGVMIGGRNIKV 193
>gi|443899731|dbj|GAC77060.1| nuclear localization sequence binding protein, partial [Pseudozyma
antarctica T-34]
Length = 400
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 93/185 (50%), Gaps = 1/185 (0%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+E + I+ QLS + L+ + G+V R+ T + +G Y++F +
Sbjct: 198 QEGETNQIWVGQLSWNVDNEWLKSEMEAFGEVTSARVQLDRTTGKSRGFGYVDFATAAAA 257
Query: 72 PLAMGL-NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
A G+++ G I + + + + N + + L+IG+L F+I+ED
Sbjct: 258 KKAFEEGQGKEVDGRAIRIDLSTPKGDVTDNRAKKFNDQRSAPSSTLFIGNLSFDISEDD 317
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
+ F G++ ++L DPD+GR KG+G++ F + + A+ A + + G ELAGRP+++
Sbjct: 318 VWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAIDAMTGQELAGRPLRLDF 377
Query: 191 VTDRN 195
T R+
Sbjct: 378 STPRD 382
>gi|340725363|ref|XP_003401040.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
terrestris]
gi|350403872|ref|XP_003486932.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
impatiens]
Length = 592
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 6/257 (2%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
++ +S ++ + + F G ++ + + T++ KG A++E++ PE+ LA+ +
Sbjct: 122 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 181
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG + G I V + +A + + + R+YI S+H ++TED ++ +FE
Sbjct: 182 NGVMIGGRNIKVVGRPSNMPQAQSVIDEITEESKHY-NRIYIASIHQDLTEDDIKSVFEA 240
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES 197
FG I +L R KGYGFI + + A +A +N F+L G+ ++VG +
Sbjct: 241 FGPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITPPNA 300
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGT---GL-ELPPAAASALNLAQNAIL 253
+ G PS A AT ++Q M +A GL +L AA LN A I+
Sbjct: 301 LMGPPSGTSMMPTAAAVAAAAATAKIQAMDAVASNAVALGLTKLGAAAPPILNQALPGIV 360
Query: 254 NSSTPQVSSSTAPPIAT 270
+ + P IAT
Sbjct: 361 RPTIAPATMMAPPTIAT 377
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F + ED +R F PFG I +I + DP T + KG+ F+ + + A+ A EQ
Sbjct: 121 RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQ 180
Query: 176 LNGFELAGRPMKV 188
+NG + GR +KV
Sbjct: 181 MNGVMIGGRNIKV 193
>gi|358367745|dbj|GAA84363.1| hypothetical protein AKAW_02478 [Aspergillus kawachii IFO 4308]
Length = 546
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 3 PAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY 62
P S P + +F LS + L+ F S G++ VR++T T R +G Y
Sbjct: 281 PKKSKTEDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGY 340
Query: 63 IEFKDPESVPLAMGLNGQK-------------LLGIPIIVQPTQAEKNRAGNTLPNLQPR 109
+E+ + +V A +K G P K+RA + +
Sbjct: 341 VEYTN--AVDAAKAFEAKKGAEIDGRVINLDYATGRPANKDQQGGFKDRANARARSFGDQ 398
Query: 110 GTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDA 169
+ L++G+L F+ ED + +F G I I+L DPD+GR KG+G++ + S D+A
Sbjct: 399 ASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEA 458
Query: 170 KKAQEQLNGFELAGRPMKVGTVTDR 194
+ A +L G +L GRP+++ T R
Sbjct: 459 RAAFNELQGADLLGRPVRLDFSTPR 483
>gi|358379816|gb|EHK17495.1| hypothetical protein TRIVIDRAFT_43079, partial [Trichoderma virens
Gv29-8]
Length = 245
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-G 76
T+F L+ + L + F S + R++T T R +G Y++FKD ES +A
Sbjct: 1 TLFAGSLAWSVDDNALYQAFESFDGLVGARVVTEKGTGRSRGFGYVDFKDAESAQVAYEA 60
Query: 77 LNGQKLLGIPIIVQPTQAE------KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+ GQ + G I + A ++RA + + L++G+L F+ +D
Sbjct: 61 MQGQDVGGRNINLDYANARPEGSNPQDRAADRAKKHGDTLSAESDTLFVGNLPFDTDQDT 120
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
+ F + +++L DPD+G KG+G++TF S +DAK A E NG
Sbjct: 121 VTEFFNEVAAVTSVRLPTDPDSGNLKGFGYVTFGSVEDAKAALEAKNG 168
>gi|348676634|gb|EGZ16451.1| hypothetical protein PHYSODRAFT_314245 [Phytophthora sojae]
Length = 449
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 12/186 (6%)
Query: 16 ARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM 75
AR ++ L ++ D+ F+ G + + L R KG ++E++D + A+
Sbjct: 119 ARRLYIGNLYYDLKEEDIRSAFAPFGAIHSIDLSLEPGASRSKGFCFLEYEDVLAAESAV 178
Query: 76 GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNL-----QPRGTGGPMR-LYIGSLHFNITED 129
Q L G P+ + + + GNT PN Q P + +YI ++ +
Sbjct: 179 ----QVLNGTPLANRAMRVGRPHRGNTNPNDSLSIGQEAIKNVPTKCIYIANVRVELNSQ 234
Query: 130 MLRGIFEPFGKI-DNIQLMVDP-DTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
L IF PFG I ++ V P ++G +GYGF+ F A A + +NGFELAG+P+K
Sbjct: 235 HLESIFSPFGAIRSSVMAAVSPLESGVHRGYGFMEFVEESCAASAIQHMNGFELAGQPLK 294
Query: 188 VGTVTD 193
VG ++
Sbjct: 295 VGKASE 300
>gi|297847164|ref|XP_002891463.1| hypothetical protein ARALYDRAFT_474037 [Arabidopsis lyrata subsp.
lyrata]
gi|297337305|gb|EFH67722.1| hypothetical protein ARALYDRAFT_474037 [Arabidopsis lyrata subsp.
lyrata]
Length = 550
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 16 ARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM 75
++T+F LS I D+E FF VG+V DVR T F+G ++EF E A+
Sbjct: 293 SKTLFAANLSFNIERSDVENFFKEVGEVVDVRFSTNRDDGSFRGFGHVEFASSEEAQKAL 352
Query: 76 GLNGQKLLG--IPIIVQPTQAEKNRAGNTLP---NLQPRGTGG-PMRLYIGSLHFNITED 129
+G+ LLG I + + + E+ P N + G GG ++++ +++ED
Sbjct: 353 EFHGRPLLGREIRLDIAQERGERGERPAYTPQSGNYKSGGDGGDEKKVFVKGFDSSLSED 412
Query: 130 MLRGI----FEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+R F G+I ++ + +D DTG SKG ++ F + K+ +LNG ++ G
Sbjct: 413 DIRNALTEHFSSCGEIKSVSVPMDRDTGNSKGIAYVAFS---EGKEKALELNGSDMGG 467
>gi|15222009|ref|NP_175322.1| nucleolin [Arabidopsis thaliana]
gi|75334377|sp|Q9FVQ1.1|NUCL1_ARATH RecName: Full=Nucleolin 1; AltName: Full=Protein NUCLEOLIN LIKE 1;
Short=AtNUC-L1; AltName: Full=Protein PARALLEL 1;
Short=AtPARL1
gi|11094815|gb|AAG29744.1|AC084414_12 nuM1 protein, putative [Arabidopsis thaliana]
gi|28973759|gb|AAO64195.1| putative nucleolin [Arabidopsis thaliana]
gi|332194246|gb|AEE32367.1| nucleolin [Arabidopsis thaliana]
Length = 557
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 17/180 (9%)
Query: 16 ARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM 75
++T+F LS I D+E FF G+V DVR T F+G ++EF E A+
Sbjct: 296 SKTLFAANLSFNIERADVENFFKEAGEVVDVRFSTNRDDGSFRGFGHVEFASSEEAQKAL 355
Query: 76 GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPR-------GTGG-PMRLYIGSLHFNIT 127
+G+ LLG I + Q R P P+ G GG ++++ +++
Sbjct: 356 EFHGRPLLGREIRLDIAQERGERG--ERPAFTPQSGNFRSGGDGGDEKKIFVKGFDASLS 413
Query: 128 ED----MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
ED LR F G+I N+ + +D DTG SKG ++ F + K+ +LNG ++ G
Sbjct: 414 EDDIKNTLREHFSSCGEIKNVSVPIDRDTGNSKGIAYLEFS---EGKEKALELNGSDMGG 470
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 98/192 (51%), Gaps = 8/192 (4%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
D S ++ + IF L I + L E FS G + + I ++T + KG ++ F++
Sbjct: 122 DPSMRKKGSGNIFIKNLHPDIDNKTLYETFSVFGNILSCK-IANDETGKSKGFGFVHFEN 180
Query: 68 PESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
E+ A+ +NG L G + V P ++K+R + L + T +Y+ +L
Sbjct: 181 EEAAREAIDAINGMLLNGQEVYVAPHVSKKDRQ-SKLDEARANFTN----VYVKNLDLEA 235
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
TE+ +F+P+G I ++ L D + G+S+G+GF+ F + +DA KA E LN E G+ +
Sbjct: 236 TEEDFENLFKPYGTITSVALEKDAE-GKSRGFGFVDFENHEDAVKAVEALNDTEYKGQTL 294
Query: 187 KVGTVTDRNESV 198
VG + E +
Sbjct: 295 YVGRAQKKYERL 306
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 89/173 (51%), Gaps = 13/173 (7%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-G 76
+++ +L + L + FS +G V +R+ T+ G AY+ F D E+ A+
Sbjct: 44 SLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKTAIEK 103
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
LN + G P + +Q + P+++ +G+G ++I +LH +I L F
Sbjct: 104 LNYTAIKGRPCRIMWSQRD--------PSMRKKGSGN---IFIKNLHPDIDNKTLYETFS 152
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
FG I + ++ D +TG+SKG+GF+ F + + A++A + +NG L G+ + V
Sbjct: 153 VFGNILSCKIAND-ETGKSKGFGFVHFENEEAAREAIDAINGMLLNGQEVYVA 204
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 8/183 (4%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPE-SVPLAMGL 77
++ L D E F G + V L + + +G +++F++ E +V L
Sbjct: 226 VYVKNLDLEATEEDFENLFKPYGTITSVAL-EKDAEGKSRGFGFVDFENHEDAVKAVEAL 284
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGN-----TLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
N + G + V Q + R L+ + L+I +L +I ++ L+
Sbjct: 285 NDTEYKGQTLYVGRAQKKYERLQELKKQYQASKLEKLAKYQGINLFIKNLDDSIDDEKLK 344
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
F PFG I + ++M + G+SKG+GF+ F + ++A +A + N +AG+P+ V
Sbjct: 345 EEFAPFGTITSARVM-RTENGKSKGFGFVCFSTPEEATRAITEKNQQIVAGKPLYVAIAQ 403
Query: 193 DRN 195
++
Sbjct: 404 RKD 406
>gi|358397912|gb|EHK47280.1| hypothetical protein TRIATDRAFT_165657, partial [Trichoderma
atroviride IMI 206040]
Length = 465
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 10/185 (5%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E + R ++ L QR+ L + F + G V++V++I +K + ++E+ DP +
Sbjct: 72 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIP-DKNAKGYNYGFVEYDDPGAAD 130
Query: 73 LAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDML 131
AM LNG+++ I V N +++G L + +D+L
Sbjct: 131 RAMATLNGRRVHQSEIRVNWAYQSNTTTKEDTSNH--------FHIFVGDLSNEVNDDIL 182
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTV 191
F FG + ++M D TGRS+GYGF+ F DA+KA ++G L R ++
Sbjct: 183 HQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA 242
Query: 192 TDRNE 196
+ +
Sbjct: 243 NQKGQ 247
>gi|78356222|ref|YP_387671.1| RNP-1 like RNA-binding protein [Desulfovibrio alaskensis G20]
gi|78218627|gb|ABB37976.1| RNP-1 like RNA-binding protein [Desulfovibrio alaskensis G20]
Length = 114
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%)
Query: 115 MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQE 174
M +Y+G+L + ++ED LRG FE FG +D ++++ D DTGRSKG+GF+ +A A E
Sbjct: 1 MNIYVGNLSYQMSEDDLRGAFEEFGAVDKVRIITDHDTGRSKGFGFVEMAEDSEANAAIE 60
Query: 175 QLNGFELAGRPMKVGTVTDRNE 196
LNG E+ GR + V R E
Sbjct: 61 ALNGREMGGRSITVNEARPRPE 82
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF-KDPESVPLAMG 76
I+ LS ++ DL F G V VR+IT + T R KG ++E +D E+
Sbjct: 2 NIYVGNLSYQMSEDDLRGAFEEFGAVDKVRIITDHDTGRSKGFGFVEMAEDSEANAAIEA 61
Query: 77 LNGQKLLGIPIIVQPTQ 93
LNG+++ G I V +
Sbjct: 62 LNGREMGGRSITVNEAR 78
>gi|296081803|emb|CBI20808.3| unnamed protein product [Vitis vinifera]
Length = 397
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 17/195 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
M P S +L P + R+++ + + + L E F S G + +LI +K+
Sbjct: 1 MEPVPSGNLPPGFDSSSCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKSS--- 57
Query: 59 GIAYIEFKDPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
++++ D S LA M L+G+++ G + V A R T G +
Sbjct: 58 -YGFVDYLDRASASLAIMTLHGRQVYGQALKVNWAYASGQR----------EDTSGHFNI 106
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F F + ++M D TGRSKGYGF++F + DA+ A L+
Sbjct: 107 FVGDLSPEVTDATLYACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLS 166
Query: 178 GFELAGRPMKVGTVT 192
G L R ++ T
Sbjct: 167 GKWLGNRQIRCNWAT 181
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 81/209 (38%), Gaps = 31/209 (14%)
Query: 4 AYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
AY+ + IF LS + L FS D R++ +KT R KG ++
Sbjct: 91 AYASGQREDTSGHFNIFVGDLSPEVTDATLYACFSVFASCSDARVMWDHKTGRSKGYGFV 150
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIV-----------QPTQAEKNRAGNTLPNLQ----- 107
F++ + A+ K LG I + Q +N+ L N
Sbjct: 151 SFRNQQDAQSAINDLSGKWLGNRQIRCNWATKGAGFNEDKQVNENQNAVVLTNGSSDGSQ 210
Query: 108 -------PRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGK--IDNIQLMVDPDTGRSKGY 158
P +Y+G+L +T+ L F G I+ +++ R KG+
Sbjct: 211 ENTNEEAPENNPAYTTVYVGNLSHEVTQAELHCQFHALGAGVIEEVRIQ------RDKGF 264
Query: 159 GFITFHSADDAKKAQEQLNGFELAGRPMK 187
GF+ +H+ ++A A + NG + G+ MK
Sbjct: 265 GFVRYHTHEEAALAIQMANGRIVRGKSMK 293
>gi|225429862|ref|XP_002283326.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
Length = 436
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 17/195 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
M P S +L P + R+++ + + + L E F S G + +LI +K+
Sbjct: 40 MEPVPSGNLPPGFDSSSCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKSS--- 96
Query: 59 GIAYIEFKDPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
++++ D S LA M L+G+++ G + V A R T G +
Sbjct: 97 -YGFVDYLDRASASLAIMTLHGRQVYGQALKVNWAYASGQR----------EDTSGHFNI 145
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F F + ++M D TGRSKGYGF++F + DA+ A L+
Sbjct: 146 FVGDLSPEVTDATLYACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLS 205
Query: 178 GFELAGRPMKVGTVT 192
G L R ++ T
Sbjct: 206 GKWLGNRQIRCNWAT 220
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 81/209 (38%), Gaps = 31/209 (14%)
Query: 4 AYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
AY+ + IF LS + L FS D R++ +KT R KG ++
Sbjct: 130 AYASGQREDTSGHFNIFVGDLSPEVTDATLYACFSVFASCSDARVMWDHKTGRSKGYGFV 189
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIV-----------QPTQAEKNRAGNTLPNLQ----- 107
F++ + A+ K LG I + Q +N+ L N
Sbjct: 190 SFRNQQDAQSAINDLSGKWLGNRQIRCNWATKGAGFNEDKQVNENQNAVVLTNGSSDGSQ 249
Query: 108 -------PRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGK--IDNIQLMVDPDTGRSKGY 158
P +Y+G+L +T+ L F G I+ +++ R KG+
Sbjct: 250 ENTNEEAPENNPAYTTVYVGNLSHEVTQAELHCQFHALGAGVIEEVRIQ------RDKGF 303
Query: 159 GFITFHSADDAKKAQEQLNGFELAGRPMK 187
GF+ +H+ ++A A + NG + G+ MK
Sbjct: 304 GFVRYHTHEEAALAIQMANGRIVRGKSMK 332
>gi|380016392|ref|XP_003692169.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
florea]
Length = 592
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 6/257 (2%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
++ +S ++ + + F G ++ + + T++ KG A++E++ PE+ LA+ +
Sbjct: 122 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 181
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG + G I V + +A + + + R+YI S+H ++TED ++ +FE
Sbjct: 182 NGVMIGGRNIKVVGRPSNMPQAQSVIDEITEESKHY-NRIYIASIHQDLTEDDIKSVFEA 240
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES 197
FG I +L R KGYGFI + + A +A +N F+L G+ ++VG +
Sbjct: 241 FGPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITPPNA 300
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGT---GL-ELPPAAASALNLAQNAIL 253
+ G PS A AT ++Q M +A GL +L AA LN A I+
Sbjct: 301 LMGPPSGTSMMPTAAAVAAAAATAKIQAMDAVASNAVALGLTKLGAAAPPILNQALPGIV 360
Query: 254 NSSTPQVSSSTAPPIAT 270
+ + P IAT
Sbjct: 361 RPTIAPATIMAPPTIAT 377
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F + ED +R F PFG I +I + DP T + KG+ F+ + + A+ A EQ
Sbjct: 121 RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQ 180
Query: 176 LNGFELAGRPMKV 188
+NG + GR +KV
Sbjct: 181 MNGVMIGGRNIKV 193
>gi|67465872|ref|XP_649094.1| RNA-binding protein TIA-1 [Entamoeba histolytica HM-1:IMSS]
gi|56465456|gb|EAL43711.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705857|gb|EMD45818.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica KU27]
Length = 306
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 41/256 (16%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQP 91
L FS VG V +++ +K+ G ++EF D + A ++G+ + G + V
Sbjct: 59 LGRIFSIVGHVVSCKIMR-DKSGVHAGYGFVEFVDSTTARFAKDNMDGRVVYGRELKVNW 117
Query: 92 T-QAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDP 150
+ A++ GN ++++G L + +D+L F+ FG++ + +++
Sbjct: 118 SYTAQQENQGN-------------YKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFT 164
Query: 151 DTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTD----------------R 194
TG+SKGYGF+TF +DA+ A + +NG +L GR +KV VT
Sbjct: 165 QTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQPKRSYDEIN 224
Query: 195 NES--------VGGGPSNLDTDEMERAGVDLGATGRLQL-MFKLAEGTGLELPPAAASAL 245
NE+ +G P N+++D++++ + G+ ++L K +A SA+
Sbjct: 225 NETSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAI 284
Query: 246 NLAQNAILNSSTPQVS 261
+ I+N ST + S
Sbjct: 285 LMCNGKIINGSTLRCS 300
>gi|291404907|ref|XP_002718787.1| PREDICTED: TIA-1 related protein-like [Oryctolagus cuniculus]
Length = 450
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 27/193 (13%)
Query: 3 PAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRR-FKGIA 61
P Y +LS RD + +QL FS +G + ++IT + + + +
Sbjct: 85 PRYVGNLS---RDVTEVLILQL------------FSQIGPCKSCKMITEHTSNDPYCFVE 129
Query: 62 YIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGS 121
+ E +D + AM NG+K+LG + V N A T P+ Q + T +++G
Sbjct: 130 FYEHRDAAAALAAM--NGRKILGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGD 178
Query: 122 LHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFEL 181
L IT + ++ F PFGKI + +++ D TG+SKGYGF++F++ DA+ A + G L
Sbjct: 179 LSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL 238
Query: 182 AGRPMKVGTVTDR 194
GR ++ T +
Sbjct: 239 GGRQIRTNWATRK 251
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F LS I T D++ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 174 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 233
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + + NT ++ + + +Y G + +T+
Sbjct: 234 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 293
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
++R F PFG+I I++ + KGY F+ F + + A A +NG + G +K
Sbjct: 294 QLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKC 347
>gi|410900506|ref|XP_003963737.1| PREDICTED: nucleolysin TIAR-like isoform 2 [Takifugu rubripes]
Length = 408
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 100/206 (48%), Gaps = 32/206 (15%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLIT--CNKTRRFKGI--------- 60
EE ++T++ LS+ + + + FS +G + ++IT N+ R + +
Sbjct: 3 EESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDVNNRDRLLEWLQLNNFYVWL 62
Query: 61 -----------AYIEFKDPESVPLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQP 108
++EF D + A +N +K+LG + V N A T P+ Q
Sbjct: 63 CCLQHTSSDPYCFVEFVDHKDAASARATMNKRKILGKEVKV-------NWA--TSPSCQK 113
Query: 109 RGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADD 168
+ T +++G L +IT + +R F PFG I + +++ D TG+SKGYGF++F++ D
Sbjct: 114 KDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLD 173
Query: 169 AKKAQEQLNGFELAGRPMKVGTVTDR 194
A+ A ++ G L GR ++ T +
Sbjct: 174 AENAISKMAGQWLQGRQIRTNWATRK 199
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
+F LS I T D+ F+ G + D R++ T + KG ++ F + A+ +
Sbjct: 122 VFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKM 181
Query: 78 NGQKLLGIPIIVQ--------PTQAEKNRAGN-TLPNLQPRGTGGPMRLYIGSLHFNITE 128
GQ L G I P + N + + ++ + + +Y G + +TE
Sbjct: 182 AGQWLQGRQIRTNWATRKPPAPKSFQDNGSKHLKFDDIVTQSSPHNCTVYCGGIQSGLTE 241
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+++ F PFG+I +++ V PD KGY F+ F S D A A +NG + G +K
Sbjct: 242 HLMQQTFSPFGQI--MEIRVFPD----KGYSFVRFSSHDSAAHAIVSVNGTVIEGNLVKC 295
>gi|83773473|dbj|BAE63600.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 440
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 10/186 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-- 76
+F LS + L+ F G++ VR++T T R +G Y+E+ + A
Sbjct: 197 LFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAK 256
Query: 77 ----LNGQKLLGIPIIVQPTQAEK----NRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
++G+K+ +P E+ +RA + + + L++G++ F+ E
Sbjct: 257 RDTEIDGRKINLDYATGRPANREQGGFQDRAQARARSFGDQASPESDTLFVGNIPFSANE 316
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
D L +F G I I+L DP++GR KG+G++ F S ++A++A +LNG E+ GRP+++
Sbjct: 317 DSLHEVFGQKGSILGIRLPTDPESGRPKGFGYVQFSSVEEAREAFNELNGAEIDGRPVRL 376
Query: 189 GTVTDR 194
T R
Sbjct: 377 DFSTPR 382
>gi|409083337|gb|EKM83694.1| hypothetical protein AGABI1DRAFT_110331 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 444
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 18/198 (9%)
Query: 11 PEERDART-IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY--IEFKD 67
P E R ++ LS R+ L E F+ G V+ V++I ++ + G+ Y +E+ D
Sbjct: 9 PAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIP-DRNYQHGGLNYGFVEYMD 67
Query: 68 PESVPLAM-GLNGQKLLGIPIIVQ-PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
S A+ LNG+K+ I V Q ++N+ T G +++G L
Sbjct: 68 MRSAETALQTLNGRKIFDTEIRVNWAYQGQQNK----------EDTSGHYHVFVGDLSPE 117
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
+ +D+L F FG + + ++M D ++G+S+GYGF+ F DA++A +NG L R
Sbjct: 118 VNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRA 177
Query: 186 MKVGTVTDRNESVGGGPS 203
++V + + GG P+
Sbjct: 178 IRVNWANQKTQ--GGAPA 193
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 41/211 (19%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
+F LS + L + FS+ G + D R++ + + +G ++ F+D A+ +
Sbjct: 109 VFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 168
Query: 78 NGQKL---------------LGIPIIVQPTQAEKNRAGNTLP-NLQPRGTGGPMR----- 116
NG+ L G P + Q + + G P N Q GGP+
Sbjct: 169 NGEWLGSRAIRVNWANQKTQGGAPAVQQSPRPAGSTGGAPAPINFQ----GGPLSYESVV 224
Query: 117 ---------LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSAD 167
+Y+G+L T+ L +F+ G + I++ D +G+ F+ + +
Sbjct: 225 QQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQAD------RGFAFVKLDTHE 278
Query: 168 DAKKAQEQLNGFELAGRPMKVGTVTDRNESV 198
A A QL G + GRP+K DR +
Sbjct: 279 HAAMAIVQLQGQMVHGRPIKCSWGKDRADGT 309
>gi|322785180|gb|EFZ11893.1| hypothetical protein SINV_08068 [Solenopsis invicta]
Length = 545
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 14/266 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
++ +S ++ + + F G ++ + + T++ KG A++E++ PE+ LA+ +
Sbjct: 75 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 134
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG + G I V + +A + + + R+YI S+H ++TED ++ +FE
Sbjct: 135 NGVMIGGRNIKVVGRPSNMPQAQSVIDEITEESKHY-NRIYIASIHQDLTEDDIKSVFEA 193
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES 197
FG I +L R KGYGFI + + A +A +N F+L G+ ++VG +
Sbjct: 194 FGPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITPPNA 253
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAILNSST 257
+ G PS A AT ++Q M +A A AL L + L ++
Sbjct: 254 LMGPPSGTSMMPTAAAVAAAAATAKIQAMDAVASN---------AVALGLTK---LGATA 301
Query: 258 PQVSSSTAPPIATQCFLLANMFDPAT 283
P + + T P + A + P T
Sbjct: 302 PPILNQTLPGVVRPTIAPATIMAPPT 327
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F + ED +R F PFG I +I + DP T + KG+ F+ + + A+ A EQ
Sbjct: 74 RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQ 133
Query: 176 LNGFELAGRPMKV 188
+NG + GR +KV
Sbjct: 134 MNGVMIGGRNIKV 146
>gi|340723465|ref|XP_003400110.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
terrestris]
Length = 443
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLN 78
+F LS +L+ +F G+V D ++ +++ R +G ++ F DP +VPL +
Sbjct: 15 LFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQNG 74
Query: 79 GQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPF 138
+L G I +P N +P+ +GG ++++G L N+TE LR F F
Sbjct: 75 PHQLDGRTIDPKPC--------NPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRF 126
Query: 139 GKIDNIQLMVDPDTGRSKGYGFITFHSAD 167
GK+ + +M D + +S+G+GF++F D
Sbjct: 127 GKVMEVVIMYDQEKKKSRGFGFLSFEDED 155
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDA----KK 171
+L++G L + T++ L+ F +G++ + +M + ++GRS+G+GF+TF + +
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 172 AQEQLNGFELAGRPMKVGTVTDRNES-------VGGGPSNLDTDEMERAGVDLGATGRLQ 224
QL+G + +P T S +GG PSN+ ++ G +
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGKVMEVV 133
Query: 225 LMF 227
+M+
Sbjct: 134 IMY 136
>gi|328779568|ref|XP_393451.4| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
mellifera]
Length = 442
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLN 78
+F LS +L+ +F G+V D ++ +++ R +G ++ F DP +VPL +
Sbjct: 15 LFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQNG 74
Query: 79 GQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPF 138
+L G I +P N +P+ +GG ++++G L N+TE LR F F
Sbjct: 75 PHQLDGRTIDPKPC--------NPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRF 126
Query: 139 GKIDNIQLMVDPDTGRSKGYGFITFHSAD 167
GK+ + +M D + +S+G+GF++F D
Sbjct: 127 GKVMEVVIMYDQEKKKSRGFGFLSFEDED 155
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDA----KK 171
+L++G L + T++ L+ F +G++ + +M + ++GRS+G+GF+TF + +
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 172 AQEQLNGFELAGRPMKVGTVTDRNES-------VGGGPSNLDTDEMERAGVDLGATGRLQ 224
QL+G + +P T S +GG PSN+ ++ G +
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGKVMEVV 133
Query: 225 LMF 227
+M+
Sbjct: 134 IMY 136
>gi|356572637|ref|XP_003554474.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 317
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 5/191 (2%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+ DA ++ L I +L E F G V V ++ T R +G A++ E
Sbjct: 103 DSNDAGRLYVGNLPYSITNSELGELFGEAGTVASVEIVYDRVTDRSRGFAFVTMGSVEDA 162
Query: 72 PLAMGL-NGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
A+ + +G ++ G + V P E+ G+ + N P ++Y G+L + +
Sbjct: 163 KEAIRMFDGSQVGGRTVKVNFPEVPKGGERLVMGSKILNSYRGFVDSPHKIYAGNLGWGL 222
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
T LR F + + +++ + D+GRS+G+GF++F +A+ A+ A + +NG E+ GRP+
Sbjct: 223 TSQGLREAFAEQPGVLSAKVIYERDSGRSRGFGFVSFETAESARAALDIMNGVEVQGRPL 282
Query: 187 KVGTVTDRNES 197
++ R S
Sbjct: 283 RLNLAEARTPS 293
>gi|417410125|gb|JAA51540.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 367
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 27/193 (13%)
Query: 3 PAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRR-FKGIA 61
P Y +LS RD + +QL FS +G + ++IT + + + +
Sbjct: 1 PRYVGNLS---RDVTEVLILQL------------FSQIGPCKSCKMITEHTSNDPYCFVE 45
Query: 62 YIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGS 121
+ E +D + AM NG+K+LG + V N A T P+ Q + T +++G
Sbjct: 46 FYEHRDAAAALAAM--NGRKILGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGD 94
Query: 122 LHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFEL 181
L IT + ++ F PFGKI + +++ D TG+SKGYGF++F++ DA+ A + G L
Sbjct: 95 LSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL 154
Query: 182 AGRPMKVGTVTDR 194
GR ++ T +
Sbjct: 155 GGRQIRTNWATRK 167
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F LS I T D++ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 90 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 149
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + + NT ++ + + +Y G + +T+
Sbjct: 150 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 209
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I +++ V P+ KGY F+ F + + A A +NG + G +K
Sbjct: 210 QLMRQTFSPFGQI--MEIRVFPE----KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 262
>gi|380017405|ref|XP_003692647.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
florea]
Length = 439
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLN 78
+F LS +L+ +F G+V D ++ +++ R +G ++ F DP +VPL +
Sbjct: 15 LFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQNG 74
Query: 79 GQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPF 138
+L G I +P N +P+ +GG ++++G L N+TE LR F F
Sbjct: 75 PHQLDGRTIDPKPC--------NPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRF 126
Query: 139 GKIDNIQLMVDPDTGRSKGYGFITFHSAD 167
GK+ + +M D + +S+G+GF++F D
Sbjct: 127 GKVMEVVIMYDQEKKKSRGFGFLSFEDED 155
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDA----KK 171
+L++G L + T++ L+ F +G++ + +M + ++GRS+G+GF+TF + +
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 172 AQEQLNGFELAGRPMKVGTVTDRNES-------VGGGPSNLDTDEMERAGVDLGATGRLQ 224
QL+G + +P T S +GG PSN+ ++ G +
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGKVMEVV 133
Query: 225 LMF 227
+M+
Sbjct: 134 IMY 136
>gi|403215569|emb|CCK70068.1| hypothetical protein KNAG_0D03220 [Kazachstania naganishii CBS
8797]
Length = 399
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 13/185 (7%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
T+F +LS + L+ F+ +G V R+I T R +G Y++F+D A+
Sbjct: 150 TLFVGRLSWSVDDEWLKNEFAPIGGVVSARVIMERGTDRSRGYGYVDFEDISYAEKALKE 209
Query: 77 LNGQKLLGIPIIV-----QPTQAEKNRAGNTLPNL--QPRGTGGPMRLYIGSLHFNITED 129
+ G+++ G PI V +P N ++ +P T L++G+L F+ D
Sbjct: 210 MQGKEIDGRPINVDMSTSKPAGGASNDRAKKFGDVPSEPSDT-----LFLGNLSFDADRD 264
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
L IF FG+I ++++ P+T + KG+G++ + + +DAKKA + L G + RP+++
Sbjct: 265 NLYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTNTEDAKKALDALQGESINDRPVRLD 324
Query: 190 TVTDR 194
T R
Sbjct: 325 FSTPR 329
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
P L++G L +++ ++ L+ F P G + + +++++ T RS+GYG++ F A+KA
Sbjct: 148 PATLFVGRLSWSVDDEWLKNEFAPIGGVVSARVIMERGTDRSRGYGYVDFEDISYAEKAL 207
Query: 174 EQLNGFELAGRPMKVGTVTDRNESVGGGPSN 204
+++ G E+ GRP+ V T + GG SN
Sbjct: 208 KEMQGKEIDGRPINVDMSTSK---PAGGASN 235
>gi|349580919|dbj|GAA26078.1| K7_Pub1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 453
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 15/185 (8%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E R ++ L + I L+++F G + +++ I +K + A++E+
Sbjct: 71 ETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIK-IMIDKNNKNVNYAFVEYHQSHDAN 129
Query: 73 LAM-GLNGQKLLG-IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+A+ LNG+++ I I Q++++ + +T L++G L+ N+ ++
Sbjct: 130 IALQTLNGKQIENNIVKINWAFQSQQSSSDDTF------------NLFVGDLNVNVDDET 177
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
LR F+ F + +M D TG S+GYGF++F S DDA+ A + + G +L GRP+++
Sbjct: 178 LRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINW 237
Query: 191 VTDRN 195
R+
Sbjct: 238 AAKRD 242
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 93 QAEKNRAGNTLPNLQPRG--TGG----PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQL 146
QAE N+ N P++ P TGG LY+G+L ITED+L+ F+ G I NI++
Sbjct: 48 QAEDNQGEND-PSVVPANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKI 106
Query: 147 MVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES--------- 197
M+D + ++ Y F+ +H + DA A + LNG ++ +K+ +S
Sbjct: 107 MIDKNN-KNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQSSSDDTFNLF 165
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAI 252
VG N+D + + A D + +M+ + G+ + ++ + AQNA+
Sbjct: 166 VGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAM 220
>gi|350406107|ref|XP_003487656.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
impatiens]
Length = 426
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLN 78
+F LS +L+ +F G+V D ++ +++ R +G ++ F DP +VPL +
Sbjct: 15 LFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQNG 74
Query: 79 GQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPF 138
+L G I +P N +P+ +GG ++++G L N+TE LR F F
Sbjct: 75 PHQLDGRTIDPKPC--------NPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRF 126
Query: 139 GKIDNIQLMVDPDTGRSKGYGFITFHSAD 167
GK+ + +M D + +S+G+GF++F D
Sbjct: 127 GKVMEVVIMYDQEKKKSRGFGFLSFEDED 155
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDA----KK 171
+L++G L + T++ L+ F +G++ + +M + ++GRS+G+GF+TF + +
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 172 AQEQLNGFELAGRPMKVGTVTDRNES-------VGGGPSNLDTDEMERAGVDLGATGRLQ 224
QL+G + +P T S +GG PSN+ ++ G +
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGKVMEVV 133
Query: 225 LMF 227
+M+
Sbjct: 134 IMY 136
>gi|255730137|ref|XP_002549993.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131950|gb|EER31508.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 442
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 13/179 (7%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
T+F +LS I L+ F +G V R+I T + +G Y++F+ A+
Sbjct: 216 TLFVGRLSWNIDDDWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFEGKSFAEKALAE 275
Query: 77 LNGQKLLGIPIIV-----QPTQAEKNRAGNTLPNLQ--PRGTGGPMRLYIGSLHFNITED 129
+ G+++ G PI + +P ++ N + Q P T L+IG+L FN D
Sbjct: 276 MQGKEIDGRPINLDMSTGKPHASKSNDRAKQFGDSQSPPSDT-----LFIGNLSFNANRD 330
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
L F +G + + ++ PDT + KG+G++ F S D+AK A E LNG + GRP ++
Sbjct: 331 GLFNTFGEYGNVISCRIPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGQYIEGRPCRL 389
>gi|449506038|ref|XP_002188262.2| PREDICTED: nucleolysin TIAR [Taeniopygia guttata]
Length = 453
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 94/182 (51%), Gaps = 14/182 (7%)
Query: 16 ARTIFCM--QLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRR-FKGIAYIEFKDPESVP 72
A I C LS+ + + + FS +G + ++IT + + + + + E +D +
Sbjct: 87 AAAILCYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAAL 146
Query: 73 LAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
AM NG+K+LG + V N A T P+ Q + T +++G L IT + ++
Sbjct: 147 AAM--NGRKILGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTEDIK 195
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
F PFGKI + +++ D TG+SKGYGF++F++ DA+ A + G L GR ++ T
Sbjct: 196 SAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 255
Query: 193 DR 194
+
Sbjct: 256 RK 257
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F LS I T D++ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 180 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 239
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + + NT ++ + + +Y G + +T+
Sbjct: 240 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 299
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I I++ + KGY F+ F + + A A +NG + G +K
Sbjct: 300 QLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 352
>gi|323335711|gb|EGA76992.1| Pub1p [Saccharomyces cerevisiae Vin13]
Length = 453
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 15/185 (8%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E R ++ L + I L+++F G + +++ I +K + A++E+
Sbjct: 71 ETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIK-IMIDKNNKNVNYAFVEYHQSHDAN 129
Query: 73 LAM-GLNGQKLLG-IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+A+ LNG+++ I I Q++++ + +T L++G L+ N+ ++
Sbjct: 130 IALQTLNGKQIENNIVKINWAFQSQQSSSDDTF------------NLFVGDLNVNVDDET 177
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
LR F+ F + +M D TG S+GYGF++F S DDA+ A + + G +L GRP+++
Sbjct: 178 LRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINW 237
Query: 191 VTDRN 195
R+
Sbjct: 238 AAKRD 242
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 93 QAEKNRAGNTLPNLQPRG--TGG----PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQL 146
QAE N+ N P++ P TGG LY+G+L ITED+L+ F+ G I NI++
Sbjct: 48 QAEDNQGEND-PSVVPANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKI 106
Query: 147 MVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES--------- 197
M+D + ++ Y F+ +H + DA A + LNG ++ +K+ +S
Sbjct: 107 MIDKNN-KNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQSSSDDTFNLF 165
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAI 252
VG N+D + + A D + +M+ + G+ + ++ + AQNA+
Sbjct: 166 VGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAM 220
>gi|347966814|ref|XP_321133.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|347966816|ref|XP_003435970.1| AGAP001930-PB [Anopheles gambiae str. PEST]
gi|333469887|gb|EAA00972.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|333469888|gb|EGK97443.1| AGAP001930-PB [Anopheles gambiae str. PEST]
Length = 412
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 85/172 (49%), Gaps = 13/172 (7%)
Query: 1 MRPAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGI 60
M PA DD + +F LS +L+ +FS G+V D ++ N+T R +G
Sbjct: 7 MIPAELDD-----HEKGKLFVGGLSWETSHENLQRYFSRYGEVIDCVVMKNNETGRSRGF 61
Query: 61 AYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIG 120
++ F DPE+V A+ L G I +P N +P+ TGG ++++G
Sbjct: 62 GFVTFADPENVERALENGPHTLDGRTIDPKPC--------NPRSQHKPKRTGGYPKVFLG 113
Query: 121 SLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKA 172
L NITE LR F +G + + +M D + +S+G+GF++F + ++A
Sbjct: 114 GLPPNITETDLRSFFCRYGTVMEVVIMYDQEKKKSRGFGFLSFENESAVERA 165
>gi|6324312|ref|NP_014382.1| Pub1p [Saccharomyces cerevisiae S288c]
gi|308153665|sp|P32588.4|PUB1_YEAST RecName: Full=Nuclear and cytoplasmic polyadenylated RNA-binding
protein PUB1; AltName: Full=ARS consensus-binding
protein ACBP-60; AltName: Full=Poly uridylate-binding
protein; Short=Poly(U)-binding protein
gi|1301841|emb|CAA95877.1| PUB1 [Saccharomyces cerevisiae]
gi|285814634|tpg|DAA10528.1| TPA: Pub1p [Saccharomyces cerevisiae S288c]
gi|392296972|gb|EIW08073.1| Pub1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 453
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 15/185 (8%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E R ++ L + I L+++F G + +++ I +K + A++E+
Sbjct: 71 ETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIK-IMIDKNNKNVNYAFVEYHQSHDAN 129
Query: 73 LAM-GLNGQKLLG-IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+A+ LNG+++ I I Q++++ + +T L++G L+ N+ ++
Sbjct: 130 IALQTLNGKQIENNIVKINWAFQSQQSSSDDTF------------NLFVGDLNVNVDDET 177
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
LR F+ F + +M D TG S+GYGF++F S DDA+ A + + G +L GRP+++
Sbjct: 178 LRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINW 237
Query: 191 VTDRN 195
R+
Sbjct: 238 AAKRD 242
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 93 QAEKNRAGNTLPNLQPRG--TGG----PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQL 146
QAE N+ N P++ P TGG LY+G+L ITED+L+ F+ G I NI++
Sbjct: 48 QAEDNQGEND-PSVVPANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKI 106
Query: 147 MVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES--------- 197
M+D + ++ Y F+ +H + DA A + LNG ++ +K+ +S
Sbjct: 107 MIDKNN-KNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQSSSDDTFNLF 165
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAI 252
VG N+D + + A D + +M+ + G+ + ++ + AQNA+
Sbjct: 166 VGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAM 220
>gi|295646|gb|AAC37348.1| RNA-binding protein [Saccharomyces cerevisiae]
gi|311124|gb|AAC37364.1| poly(A)-binding protein [Saccharomyces cerevisiae]
gi|151944515|gb|EDN62793.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|190409011|gb|EDV12276.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
gi|207341619|gb|EDZ69624.1| YNL016Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256274171|gb|EEU09080.1| Pub1p [Saccharomyces cerevisiae JAY291]
gi|259148933|emb|CAY82177.1| Pub1p [Saccharomyces cerevisiae EC1118]
gi|323346726|gb|EGA81007.1| Pub1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352444|gb|EGA84945.1| Pub1p [Saccharomyces cerevisiae VL3]
Length = 453
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 15/185 (8%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E R ++ L + I L+++F G + +++ I +K + A++E+
Sbjct: 71 ETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIK-IMIDKNNKNVNYAFVEYHQSHDAN 129
Query: 73 LAM-GLNGQKLLG-IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+A+ LNG+++ I I Q++++ + +T L++G L+ N+ ++
Sbjct: 130 IALQTLNGKQIENNIVKINWAFQSQQSSSDDTF------------NLFVGDLNVNVDDET 177
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
LR F+ F + +M D TG S+GYGF++F S DDA+ A + + G +L GRP+++
Sbjct: 178 LRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINW 237
Query: 191 VTDRN 195
R+
Sbjct: 238 AAKRD 242
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 93 QAEKNRAGNTLPNLQPRG--TGG----PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQL 146
QAE N+ N P++ P TGG LY+G+L ITED+L+ F+ G I NI++
Sbjct: 48 QAEDNQGEND-PSVVPANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKI 106
Query: 147 MVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES--------- 197
M+D + ++ Y F+ +H + DA A + LNG ++ +K+ +S
Sbjct: 107 MIDKNN-KNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQSSSDDTFNLF 165
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAI 252
VG N+D + + A D + +M+ + G+ + ++ + AQNA+
Sbjct: 166 VGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAM 220
>gi|449517663|ref|XP_004165864.1| PREDICTED: nucleolysin TIAR-like, partial [Cucumis sativus]
Length = 394
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E F S+G V +L+ K+
Sbjct: 7 IEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSS--- 63
Query: 59 GIAYIEFKDPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
++ + D S LA + LNG+ L G PI V A R T G +
Sbjct: 64 -YGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQR----------EDTSGHFNI 112
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ ML F + + ++M D TGRS+G+GF++F + +A+ A L
Sbjct: 113 FVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLT 172
Query: 178 GFELAGRPMK 187
G L R ++
Sbjct: 173 GKWLGSRQIR 182
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
+Y+G++H +TE +L+ +F G ++ +L+ + YGF+ + A A L
Sbjct: 27 VYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSS----YGFVHYFDRRSAALAILSL 82
Query: 177 NGFELAGRPMKV 188
NG L G+P+KV
Sbjct: 83 NGRHLFGQPIKV 94
>gi|302762759|ref|XP_002964801.1| hypothetical protein SELMODRAFT_406315 [Selaginella moellendorffii]
gi|300167034|gb|EFJ33639.1| hypothetical protein SELMODRAFT_406315 [Selaginella moellendorffii]
Length = 127
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
+LY+ L + + + LRG FE FG + + ++M +PDTGRSKG+GF+TF D+AK+A E
Sbjct: 21 KLYVNGLAWGVDDLSLRGAFEEFGDVIDTKVMTNPDTGRSKGFGFVTFKREDEAKEALES 80
Query: 176 LNGFELAGRPMKVGTVTDRNESVGGGPS 203
++G + AGR ++V + E PS
Sbjct: 81 MDGKDFAGRSIRVDYAKTQKEMQQNPPS 108
>gi|417399827|gb|JAA46899.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 370
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 125/280 (44%), Gaps = 39/280 (13%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
+F L + I + L E FS+ GK+ ++++ +K R G A++ F+ + A+
Sbjct: 99 NVFIKNLDRSIDNKMLYEHFSAFGKILSSKVMSDDKGSR--GYAFVHFQSQSAADRAIEE 156
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
+NG L + V P + K R L N T +YI + ++ ++ L+ +F
Sbjct: 157 MNGALLKNCRLFVGPFKNRKEREAE-LQNKANEFTN----VYIKNFGDDMDDERLKEVFS 211
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
+GKI ++++M D +G+SKG+GF++F + + A++A E +NG ++ G+ + VG + E
Sbjct: 212 QYGKIVSVKVMTDS-SGKSKGFGFVSFDTHEAAQRAVEYMNGKDICGQMVFVGRAQKKAE 270
Query: 197 S-------------------------VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAE 231
+ +D +++ RA G+ R+++M +
Sbjct: 271 RQAELKQMFEQLKRERFGRCRGVKLYIKNLDETIDEEQLRRAFSSFGSMSRVKVMEEEGR 330
Query: 232 GTGLEL-----PPAAASALNLAQNAILNSSTPQVSSSTAP 266
G L P A A+ +L S ++ + P
Sbjct: 331 SKGFGLICFSCPEEATKAMAEMNGQVLGSKAINIALAQRP 370
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 37 FSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAMGLNGQKLLGIPIIVQPTQ 93
F+ VG V +R+ TRR G AY+ F D + V M N + G I + +Q
Sbjct: 30 FNPVGPVLSIRICRDLVTRRSLGYAYVNFLNLADAQKVLDTM--NFDMIQGKSIRLMWSQ 87
Query: 94 AEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTG 153
+ L+ G G ++I +L +I ML F FGKI + ++M D D G
Sbjct: 88 RD--------AYLRKSGIGN---VFIKNLDRSIDNKMLYEHFSAFGKILSSKVMSD-DKG 135
Query: 154 RSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
S+GY F+ F S A +A E++NG L + VG +R E
Sbjct: 136 -SRGYAFVHFQSQSAADRAIEEMNGALLKNCRLFVGPFKNRKE 177
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G L ++TEDML F P G + +I++ D T RS GY ++ F + DA+K + +
Sbjct: 12 LYVGDLPADVTEDMLFRKFNPVGPVLSIRICRDLVTRRSLGYAYVNFLNLADAQKVLDTM 71
Query: 177 NGFELAGRPMKV 188
N + G+ +++
Sbjct: 72 NFDMIQGKSIRL 83
>gi|172438|gb|AAA02808.1| RNA-binding protein [Saccharomyces cerevisiae]
Length = 429
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 15/185 (8%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E R ++ L + I L+++F G + +++ I +K + A++E+
Sbjct: 71 ETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIK-IMIDKNNKNVNYAFVEYHQSHDAN 129
Query: 73 LAM-GLNGQKLLG-IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+A+ LNG+++ I I Q++++ + +T L++G L+ N+ ++
Sbjct: 130 IALQTLNGKQIENNIVKINWAFQSQQSSSDDTF------------NLFVGDLNVNVDDET 177
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
LR F+ F + +M D TG S+GYGF++F S DDA+ A + + G +L GRP+++
Sbjct: 178 LRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINW 237
Query: 191 VTDRN 195
R+
Sbjct: 238 AAKRD 242
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 93 QAEKNRAGNTLPNLQPRG--TGG----PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQL 146
QAE N+ N P++ P TGG LY+G+L ITED+L+ F+ G I NI++
Sbjct: 48 QAEDNQGEND-PSVVPANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKI 106
Query: 147 MVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES--------- 197
M+D + ++ Y F+ +H + DA A + LNG ++ +K+ +S
Sbjct: 107 MIDKNN-KNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQSSSDDTFNLF 165
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAI 252
VG N+D + + A D + +M+ + G+ + ++ + AQNA+
Sbjct: 166 VGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAM 220
>gi|449453379|ref|XP_004144435.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 422
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E F S+G V +L+ K+
Sbjct: 35 IEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSS--- 91
Query: 59 GIAYIEFKDPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
++ + D S LA + LNG+ L G PI V A R T G +
Sbjct: 92 -YGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQR----------EDTSGHFNI 140
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ ML F + + ++M D TGRS+G+GF++F + +A+ A L
Sbjct: 141 FVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLT 200
Query: 178 GFELAGRPMK 187
G L R ++
Sbjct: 201 GKWLGSRQIR 210
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 86 PIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQ 145
P ++ P Q E +GN P +Y+G++H +TE +L+ +F G ++ +
Sbjct: 27 PGLLAPPQIEPIPSGNLPPGFDASTC---RSVYVGNIHIQVTEPLLQEVFGSIGPVEGCK 83
Query: 146 LMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
L+ + YGF+ + A A LNG L G+P+KV
Sbjct: 84 LVRKEKSS----YGFVHYFDRRSAALAILSLNGRHLFGQPIKV 122
>gi|365763380|gb|EHN04909.1| Pub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 453
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 15/185 (8%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E R ++ L + I L+++F G + +++ I +K + A++E+
Sbjct: 71 ETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIK-IMIDKNNKNVNYAFVEYHQSHDAN 129
Query: 73 LAM-GLNGQKLLG-IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+A+ LNG+++ I I Q++++ + +T L++G L+ N+ ++
Sbjct: 130 IALQTLNGKQIENNIVKINWAFQSQQSSSDDTF------------NLFVGDLNVNVDDET 177
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
LR F+ F + +M D TG S+GYGF++F S DDA+ A + + G +L GRP+++
Sbjct: 178 LRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINW 237
Query: 191 VTDRN 195
R+
Sbjct: 238 AAKRD 242
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 93 QAEKNRAGNTLPNLQPRG--TGG----PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQL 146
QAE N+ N P++ P TGG LY+G+L ITED+L+ F+ G I NI++
Sbjct: 48 QAEDNQGEND-PSVVPANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKI 106
Query: 147 MVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES--------- 197
M+D + ++ Y F+ +H + DA A + LNG ++ +K+ +S
Sbjct: 107 MIDKNN-KNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQSSSDDTFNLF 165
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAI 252
VG N+D + + A D + +M+ + G+ + ++ + AQNA+
Sbjct: 166 VGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAM 220
>gi|88811230|ref|ZP_01126486.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gi|88791769|gb|EAR22880.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 94
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
+Y+G+L F+ +ED LR +F +G +D+++LM D DTGR +G+GF+T S DA A E L
Sbjct: 4 IYVGNLPFSASEDELRELFAAYGNVDSVRLMTDRDTGRPRGFGFVTM-SDTDAASAIEAL 62
Query: 177 NGFELAGRPMKVGTVTDRNESVGGGP 202
+G + GR ++V +R E GGP
Sbjct: 63 DGKDFGGRNLRVNEAQERKERPSGGP 88
>gi|12230584|sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
Full=CP29A; Flags: Precursor
gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris]
Length = 273
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 6/194 (3%)
Query: 7 DDLSPEERDAR---TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
DD EER+ IF L + L E F G V V +I T R +G ++
Sbjct: 74 DDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFV 133
Query: 64 EFKDPESVPLA-MGLNGQKLLGIPIIVQ--PTQAEKNRAGNTLPNLQPRGTGGPMRLYIG 120
E V A NG +L G + V P ++ + + R+Y+G
Sbjct: 134 TMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVG 193
Query: 121 SLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFE 180
+L + + +D L +F GK+ + +++ D D+GRS+G+GF+T+ SA++ A E L+G +
Sbjct: 194 NLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVD 253
Query: 181 LAGRPMKVGTVTDR 194
L GR ++V R
Sbjct: 254 LNGRAIRVSPAEAR 267
>gi|167391953|ref|XP_001739964.1| nucleolysin TIAR [Entamoeba dispar SAW760]
gi|165896141|gb|EDR23641.1| nucleolysin TIAR, putative [Entamoeba dispar SAW760]
Length = 306
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 11 PEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPES 70
P +++++ + + + L FS VG V +++ +K+ G ++EF D +
Sbjct: 37 PINANSKSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMR-DKSGTHAGYGFVEFVDSTT 95
Query: 71 VPLAM-GLNGQKLLGIPIIVQ--PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
A ++G+ + G + V T ++N+ G ++++G L +
Sbjct: 96 ARFAKDNMDGRVVYGRELKVNWSYTAQQENQ--------------GSYKIFVGGLQPEVN 141
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
+D+L F+ FG++ + +++ TG+SKGYGF+TF +DA+ A + +NG +L GR +K
Sbjct: 142 DDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIK 201
Query: 188 VGTVTD----------------RNES--------VGGGPSNLDTDEMERAGVDLGATGRL 223
V VT NE+ +G P N+++D++++ + G+ +
Sbjct: 202 VNWVTSNIASKTEQPKRSYDEINNETSIQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEV 261
Query: 224 QL-MFKLAEGTGLELPPAAASALNLAQNAILNSSTPQVS 261
+L K +A SA+ + I+N ST + S
Sbjct: 262 RLNKDKGYAFIKFSKHESATSAILMCNGKIINGSTLRCS 300
>gi|308505212|ref|XP_003114789.1| CRE-RNP-6 protein [Caenorhabditis remanei]
gi|308258971|gb|EFP02924.1| CRE-RNP-6 protein [Caenorhabditis remanei]
Length = 817
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 24/194 (12%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRL-------ITCNKT--------RRFKGIAYI 63
I+ +S IR L + F G ++ + + ++C++ + K A++
Sbjct: 134 IYVGSISFEIREDMLRKAFDPFGPIKSINMSWDPATGVSCDRCLNISISSFQHHKTFAFV 193
Query: 64 EFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQP------RGTGGPMR 116
E++ PE+ LA +NGQ L G + V ++ R +P QP + R
Sbjct: 194 EYEIPEAALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFR 253
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS-KGYGFITFHSADDAKKAQEQ 175
+Y+ S+H +++E L G+FE FG+I QL P TGR +G+G+I F++ + +A
Sbjct: 254 VYVASVHPDLSESELGGVFEAFGQIIKCQLARTP-TGRGHRGFGYIEFNNVNSQNEAIAG 312
Query: 176 LNGFELAGRPMKVG 189
+N F+L G+ ++VG
Sbjct: 313 MNMFDLGGQYLRVG 326
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 15/91 (16%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS---------------KGYGF 160
R+Y+GS+ F I EDMLR F+PFG I +I + DP TG S K + F
Sbjct: 133 RIYVGSISFEIREDMLRKAFDPFGPIKSINMSWDPATGVSCDRCLNISISSFQHHKTFAF 192
Query: 161 ITFHSADDAKKAQEQLNGFELAGRPMKVGTV 191
+ + + A AQE +NG L GR +KV ++
Sbjct: 193 VEYEIPEAALLAQESMNGQMLGGRNLKVNSM 223
>gi|449447926|ref|XP_004141717.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449480481|ref|XP_004155906.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 422
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 17/195 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E F S G V +L+ K+
Sbjct: 36 LEPIPSGNLPPGFDPSTCRSVYVGNVHTQVTEPLLQEVFGSTGLVESCKLVRKEKSS--- 92
Query: 59 GIAYIEFKDPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
+I + D S +A + LNG+ L G PI V A R T G +
Sbjct: 93 -YGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQR----------EDTSGHFNI 141
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F F + ++M D TGRS+G+GF++F + DA+ A L
Sbjct: 142 FVGDLSPEVTDSTLFACFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 201
Query: 178 GFELAGRPMKVGTVT 192
G L R ++ T
Sbjct: 202 GKWLGSRQIRCNWAT 216
>gi|340522219|gb|EGR52452.1| predicted protein [Trichoderma reesei QM6a]
Length = 477
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 10/185 (5%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E + R ++ L QR+ L + F + G V++V++I +K + ++E+ DP +
Sbjct: 71 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIP-DKNAKGYNYGFVEYDDPGAAE 129
Query: 73 LAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDML 131
AM LNG+++ I V + N +++G L + +D+L
Sbjct: 130 RAMQTLNGRRVHQSEIRVNWAYQSNTTSKEDTSNH--------FHIFVGDLSNEVNDDIL 181
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTV 191
F FG + ++M D TGRS+GYGF+ F DA+KA ++G L R ++
Sbjct: 182 MQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA 241
Query: 192 TDRNE 196
+ +
Sbjct: 242 NQKGQ 246
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 85/216 (39%), Gaps = 48/216 (22%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD-PESVPLAMGL 77
IF LS + L + FS+ G V + R++ KT R +G ++ F+D P++ +
Sbjct: 167 IFVGDLSNEVNDDILMQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSM 226
Query: 78 NGQKLLGIPIIV-------QPTQAEKNRAGNT---------------------------L 103
+G+ L I QP+ A++
Sbjct: 227 DGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPFGHHQFPAHGVASYEMILAQT 286
Query: 104 PNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITF 163
PN Q Y+G+L T + + +F+ FG + + D +G+ FI
Sbjct: 287 PNWQ-------TTCYVGNLTPYTTPNDVVPLFQNFGFVMESRFQAD------RGFAFIKM 333
Query: 164 HSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVG 199
S ++A A Q+NG+ + GRP+K D+ + G
Sbjct: 334 DSHENAAMAICQMNGYNVNGRPLKCSWGKDKAPNSG 369
>gi|410913984|ref|XP_003970468.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Takifugu rubripes]
Length = 319
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 16/176 (9%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
D S +E DA +F LS +DL+++F+ G+V D + T R +G +I FKD
Sbjct: 55 DASKDEEDAGKMFVGGLSWDTSKKDLKDYFNKFGEVTDCTIKMDQGTGRSRGFGFILFKD 114
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
P SV + KL G ++ P +A A P ++++G L+ + +
Sbjct: 115 PASVEKVLEQKEHKLDGR--VIDPKRA---LAMKKEP---------VKKVFVGGLNPDTS 160
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
++++ FE FG+I+NI+L DP T + +G+ FIT+ KKA E N F G
Sbjct: 161 KEVIHEYFEAFGEIENIELPQDPKTEKRRGFVFITYKEEACVKKALE--NKFHTVG 214
>gi|348582138|ref|XP_003476833.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Cavia porcellus]
Length = 482
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 126/268 (47%), Gaps = 39/268 (14%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
+ L + + + L E FS G++ ++++ ++ KG A++ F+ + A+ +
Sbjct: 212 VIIKNLDRSVDNKTLYEHFSGFGRILSSKVMSDDQGS--KGYAFVHFQSQSAADCAIQEM 269
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG+ + ++V P ++ ++R L+ R T +Y+ + ++ ++ L+G+F
Sbjct: 270 NGKVIRDRQVLVAPFRSRRDREAE----LRTR-TSEFTNVYVKNFGEDMDDERLQGVFSK 324
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES 197
+G+ ++++M D +G+SKG+GF++F S + AKKA E++NG ++ G+ + VG + E
Sbjct: 325 YGRTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEMNGKDINGQLVFVGRAQKKEER 383
Query: 198 -------------------------VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEG 232
+ +D D + RA G+ R+++M + +
Sbjct: 384 QAELKQVFEELKRDGARRCQGVKLYIKNLDDTVDDDRLRRAFSSFGSISRVKVMEEEGQR 443
Query: 233 TGLEL-----PPAAASALNLAQNAILNS 255
G L P AA A+ +L S
Sbjct: 444 KGFGLVCFSSPEEAAKAMTQMNGRVLGS 471
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 9/176 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
++ + + L+ FS G+ V+++T + + + KG ++ F E+ A+ +
Sbjct: 304 VYVKNFGEDMDDERLQGVFSKYGRTLSVKVMT-DSSGKSKGFGFVSFDSHEAAKKAVEEM 362
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR-----LYIGSLHFNITEDMLR 132
NG+ + G + V Q ++ R + G R LYI +L + +D LR
Sbjct: 363 NGKDINGQLVFVGRAQKKEERQAELKQVFEELKRDGARRCQGVKLYIKNLDDTVDDDRLR 422
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
F FG I +++M + G+ KG+G + F S ++A KA Q+NG L +P+ +
Sbjct: 423 RAFSSFGSISRVKVM--EEEGQRKGFGLVCFSSPEEAAKAMTQMNGRVLGSKPLNI 476
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G LH + TED+L F G + +I++ D T R GY ++ F DA+KA + +
Sbjct: 124 LYVGDLHADATEDLLFRKFSXAGPVLSIRICRDVATRRPLGYAYVNFLRPADAQKALDTM 183
Query: 177 NGFELAGRPMKV 188
N + G+P+++
Sbjct: 184 NFDAVEGKPIRL 195
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 14/161 (8%)
Query: 37 FSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQPTQAE 95
FS G V +R+ TRR G AY+ F P A+ +N + G PI + +Q +
Sbjct: 142 FSXAGPVLSIRICRDVATRRPLGYAYVNFLRPADAQKALDTMNFDAVEGKPIRLMWSQRD 201
Query: 96 KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS 155
L+ G G + I +L ++ L F FG+I + ++M D D G S
Sbjct: 202 --------ACLRKSGVGN---VIIKNLDRSVDNKTLYEHFSGFGRILSSKVMSD-DQG-S 248
Query: 156 KGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
KGY F+ F S A A +++NG + R + V R +
Sbjct: 249 KGYAFVHFQSQSAADCAIQEMNGKVIRDRQVLVAPFRSRRD 289
>gi|413919829|gb|AFW59761.1| hypothetical protein ZEAMMB73_712339 [Zea mays]
gi|413919830|gb|AFW59762.1| hypothetical protein ZEAMMB73_712339 [Zea mays]
Length = 437
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 17/181 (9%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E F S+G V +LI K+
Sbjct: 258 IEPIVSGNLPPGFDSSTCRSVYVCNIHLQVTDAVLQEVFQSIGPVEGCKLIRKEKS---- 313
Query: 59 GIAYIEFKDPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
+I++ D LA + LNG++L G PI V N A + P GT G +
Sbjct: 314 SFGFIDYHDRRYAALAILSLNGRQLYGQPIKV-------NWAYTSTPR---EGTSGHFNI 363
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F + + +M D TGRS+G+GF++F + DA+ LN
Sbjct: 364 FVGDLCPEVTDATLFAFFSGYSTCSDASVMWDQKTGRSRGFGFVSFRNQQDAQSEINDLN 423
Query: 178 G 178
G
Sbjct: 424 G 424
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
+Y+ ++H +T+ +L+ +F+ G ++ +L+ + +GFI +H A A L
Sbjct: 278 VYVCNIHLQVTDAVLQEVFQSIGPVEGCKLIRKEKSS----FGFIDYHDRRYAALAILSL 333
Query: 177 NGFELAGRPMKV 188
NG +L G+P+KV
Sbjct: 334 NGRQLYGQPIKV 345
>gi|225690511|ref|NP_001070120.2| nucleolin [Danio rerio]
Length = 705
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 90/181 (49%), Gaps = 23/181 (12%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+ERDART+F L I DL E F + D+R+ N T +GIAYIEFK
Sbjct: 372 KERDARTLFVKNLPYSITQDDLREIFD---QAVDIRVPMGN-TGTSRGIAYIEFKTEAIA 427
Query: 72 PLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR---LYIGSLHFNIT 127
A+ G + G IIV T +K+R G G G P L + +L F+ +
Sbjct: 428 EKALEEAQGSDVQGRSIIVDFT-GDKSRQG---------GRGAPSASKVLVVNNLAFSAS 477
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
ED L+ +FE + + + + GR KGY F+ F + +D+K+A E N ++ GR ++
Sbjct: 478 EDSLQSVFEKA-----VSIRIPQNNGRPKGYAFVEFENVEDSKEALENCNNTDIEGRSIR 532
Query: 188 V 188
+
Sbjct: 533 L 533
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 33/180 (18%)
Query: 33 LEEFFSSVG-KVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQP 91
+ +FFS G +++DVRL T++F Y++F E + A+ LNG+KLLG P+ +
Sbjct: 307 ISKFFSKEGLEIQDVRL---GGTKKF---GYVDFASEEELQKALELNGKKLLGQPVKLDK 360
Query: 92 TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE-------PFGKIDNI 144
++++ N+ N + R L++ +L ++IT+D LR IF+ P G
Sbjct: 361 ARSKE----NSQENKKERDA---RTLFVKNLPYSITQDDLREIFDQAVDIRVPMG----- 408
Query: 145 QLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVG-GGPS 203
+TG S+G +I F + A+KA E+ G ++ GR + V D++ G G PS
Sbjct: 409 ------NTGTSRGIAYIEFKTEAIAEKALEEAQGSDVQGRSIIVDFTGDKSRQGGRGAPS 462
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 56 RFKGIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGP 114
R KG A++EF++ E A+ N + G I ++ +Q ++ R G N P T
Sbjct: 499 RPKGYAFVEFENVEDSKEALENCNNTDIEGRSIRLEYSQNDRERGGGGRGNSGPTKT--- 555
Query: 115 MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQE 174
L++ L + T+ L+ F+ G I ++ D DTG SKG+GF+ F + D K A+E
Sbjct: 556 --LFVKGLSDDTTDQTLKDSFD--GAI-AARIATDRDTGSSKGFGFVDFDNEQDCKAAKE 610
Query: 175 QLNGFELAG 183
++ E+ G
Sbjct: 611 AMDDGEIDG 619
>gi|190339446|gb|AAI62643.1| Zgc:152810 protein [Danio rerio]
Length = 708
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 90/181 (49%), Gaps = 23/181 (12%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+ERDART+F L I DL E F + D+R+ N T +GIAYIEFK
Sbjct: 375 KERDARTLFVKNLPYSITQDDLREIFD---QAVDIRVPMGN-TGTSRGIAYIEFKTEAIA 430
Query: 72 PLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR---LYIGSLHFNIT 127
A+ G + G IIV T +K+R G G G P L + +L F+ +
Sbjct: 431 EKALEEAQGSDVQGRSIIVDFT-GDKSRQG---------GRGAPSASKVLVVNNLAFSAS 480
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
ED L+ +FE + + + + GR KGY F+ F + +D+K+A E N ++ GR ++
Sbjct: 481 EDSLQSVFEKA-----VSIRIPQNNGRPKGYAFVEFENVEDSKEALENCNNTDIEGRSIR 535
Query: 188 V 188
+
Sbjct: 536 L 536
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 33/180 (18%)
Query: 33 LEEFFSSVG-KVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQP 91
+ +FFS G +++DVRL T++F Y++F E + A+ LNG+KLLG P+ +
Sbjct: 310 ISKFFSKEGLEIQDVRL---GGTKKF---GYVDFASEEELQKALELNGKKLLGQPVKLDK 363
Query: 92 TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE-------PFGKIDNI 144
++++ N+ N + R L++ +L ++IT+D LR IF+ P G
Sbjct: 364 ARSKE----NSQENKKERDA---RTLFVKNLPYSITQDDLREIFDQAVDIRVPMG----- 411
Query: 145 QLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVG-GGPS 203
+TG S+G +I F + A+KA E+ G ++ GR + V D++ G G PS
Sbjct: 412 ------NTGTSRGIAYIEFKTEAIAEKALEEAQGSDVQGRSIIVDFTGDKSRQGGRGAPS 465
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 56 RFKGIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGP 114
R KG A++EF++ E A+ N + G I ++ +Q ++ R G N P T
Sbjct: 502 RPKGYAFVEFENVEDSKEALENCNNTDIEGRSIRLEYSQNDRERGGGGRGNSGPTKT--- 558
Query: 115 MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQE 174
L++ L + T+ L+ F+ G I ++ D DTG SKG+GF+ F + D K A+E
Sbjct: 559 --LFVKGLSDDTTDQTLKDSFD--GAI-AARIATDRDTGSSKGFGFVDFDNEQDCKAAKE 613
Query: 175 QLNGFELAG 183
++ E+ G
Sbjct: 614 AMDDGEIDG 622
>gi|115313778|gb|AAI24136.1| Zgc:152810 [Danio rerio]
Length = 704
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 90/181 (49%), Gaps = 23/181 (12%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+ERDART+F L I DL E F + D+R+ N T +GIAYIEFK
Sbjct: 371 KERDARTLFVKNLPYSITQDDLREIFD---QAVDIRVPMGN-TGTSRGIAYIEFKTEAIA 426
Query: 72 PLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR---LYIGSLHFNIT 127
A+ G + G IIV T +K+R G G G P L + +L F+ +
Sbjct: 427 EKALEEAQGSDVQGRSIIVDFT-GDKSRQG---------GRGAPSASKVLVVNNLAFSAS 476
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
ED L+ +FE + + + + GR KGY F+ F + +D+K+A E N ++ GR ++
Sbjct: 477 EDSLQSVFEKA-----VSIRIPQNNGRPKGYAFVEFENVEDSKEALENCNNTDIEGRSIR 531
Query: 188 V 188
+
Sbjct: 532 L 532
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 33/180 (18%)
Query: 33 LEEFFSSVG-KVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQP 91
+ +FFS G +++DVRL T++F Y++F E + A+ LNG+KLLG P+ +
Sbjct: 306 ISKFFSKEGLEIQDVRL---GGTKKF---GYVDFASEEELQKALELNGKKLLGQPVKLDK 359
Query: 92 TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE-------PFGKIDNI 144
++++ N+ N + R L++ +L ++IT+D LR IF+ P G
Sbjct: 360 ARSKE----NSQENKKERDA---RTLFVKNLPYSITQDDLREIFDQAVDIRVPMG----- 407
Query: 145 QLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVG-GGPS 203
+TG S+G +I F + A+KA E+ G ++ GR + V D++ G G PS
Sbjct: 408 ------NTGTSRGIAYIEFKTEAIAEKALEEAQGSDVQGRSIIVDFTGDKSRQGGRGAPS 461
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 56 RFKGIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGP 114
R KG A++EF++ E A+ N + G I ++ +Q ++ R G N P T
Sbjct: 498 RPKGYAFVEFENVEDSKEALENCNNTDIEGRSIRLEYSQNDRERGGGGRGNSGPTKT--- 554
Query: 115 MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQE 174
L++ L + T+ L+ F+ G I ++ D DTG SKG+GF+ F + D K A+E
Sbjct: 555 --LFVKGLSDDTTDQTLKDSFD--GAI-AARIATDRDTGSSKGFGFVDFDNEQDCKAAKE 609
Query: 175 QLNGFELAG 183
++ E+ G
Sbjct: 610 AMDDGEIDG 618
>gi|323303187|gb|EGA56986.1| Pub1p [Saccharomyces cerevisiae FostersB]
Length = 433
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 15/185 (8%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E R ++ L + I L+++F G + +++ I +K + A++E+
Sbjct: 72 ETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIK-IMIDKNNKNVNYAFVEYHQSHDAN 130
Query: 73 LAM-GLNGQKLLG-IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+A+ LNG+++ I I Q++++ + +T L++G L+ N+ ++
Sbjct: 131 IALQTLNGKQIENNIVKINWAFQSQQSSSDDTF------------NLFVGDLNVNVDDET 178
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
LR F+ F + +M D TG S+GYGF++F S DDA+ A + + G +L GRP+++
Sbjct: 179 LRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINW 238
Query: 191 VTDRN 195
R+
Sbjct: 239 AAKRD 243
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 93 QAEKNRAGNTLPNLQPRG--TGG----PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQL 146
QAE N+ N P++ P TGG LY+G+L ITED+L+ F+ G I NI++
Sbjct: 49 QAEDNQGEND-PSVVPANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKI 107
Query: 147 MVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES--------- 197
M+D + ++ Y F+ +H + DA A + LNG ++ +K+ +S
Sbjct: 108 MIDKNN-KNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQSSSDDTFNLF 166
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASALNLAQNAI 252
VG N+D + + A D + +M+ + G+ + ++ + AQNA+
Sbjct: 167 VGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAM 221
>gi|221480563|gb|EEE19030.1| hypothetical protein TGGT1_105690 [Toxoplasma gondii GT1]
gi|221505534|gb|EEE31179.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 430
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 21/172 (12%)
Query: 11 PEERDA----RTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
P+E D R +F LS+ T L +F G V D ++ T R +G +I F
Sbjct: 113 PQEPDKELQMRKLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFT 172
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM------RLYIG 120
P+ V ++ + V TQ E RA +P + R GGP RL++G
Sbjct: 173 TPDPV--------ARVADMRHTVDGTQVEVRRA---IPREEARDHGGPGADRDAGRLFVG 221
Query: 121 SLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKA 172
+ ++ ++ LR F +G+I + +MVD R +G+GF+ F + DDA+KA
Sbjct: 222 GISDDVNDESLRAYFRHYGEIQSANVMVDRQNNRPRGFGFVIFRNPDDAEKA 273
>gi|237838585|ref|XP_002368590.1| heterogeneous nuclear ribonucleoprotein A3, putative [Toxoplasma
gondii ME49]
gi|211966254|gb|EEB01450.1| heterogeneous nuclear ribonucleoprotein A3, putative [Toxoplasma
gondii ME49]
Length = 430
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 21/172 (12%)
Query: 11 PEERDA----RTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
P+E D R +F LS+ T L +F G V D ++ T R +G +I F
Sbjct: 113 PQEPDKELQMRKLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFT 172
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM------RLYIG 120
P+ V ++ + V TQ E RA +P + R GGP RL++G
Sbjct: 173 TPDPV--------ARVADMRHTVDGTQVEVRRA---IPREEARDHGGPGADRDAGRLFVG 221
Query: 121 SLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKA 172
+ ++ ++ LR F +G+I + +MVD R +G+GF+ F + DDA+KA
Sbjct: 222 GISDDVNDESLRAYFRHYGEIQSANVMVDRQNNRPRGFGFVIFRNPDDAEKA 273
>gi|296423176|ref|XP_002841131.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637365|emb|CAZ85322.1| unnamed protein product [Tuber melanosporum]
Length = 498
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E + R ++ L R+ L++ F + G V++V++I ++ + +IE+ DP +
Sbjct: 82 EPNKRALYVGGLDPRVTEEILKQIFETTGHVQNVKIIPDKNSKGYN-YGFIEYDDPGAAE 140
Query: 73 LAM-GLNGQKLLGIPIIV----QPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
AM LNG+++ I V Q Q+ K N +++G L +
Sbjct: 141 RAMQTLNGRRIHQAEIRVNWAYQSNQSSKEDTTNHF------------HIFVGDLSNEVN 188
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
+++L F FG + ++M D TGRS+GYGF+ F DA+KA ++G L R ++
Sbjct: 189 DEVLMQAFSTFGSVSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIR 248
Query: 188 VGTVTDRNE 196
+ +
Sbjct: 249 CNWANQKGQ 257
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G L +TE++L+ IFE G + N++++ D ++ + YGFI + A++A + L
Sbjct: 88 LYVGGLDPRVTEEILKQIFETTGHVQNVKIIPDKNS-KGYNYGFIEYDDPGAAERAMQTL 146
Query: 177 NGFELAGRPMKVGTVTDRNES 197
NG + ++V N+S
Sbjct: 147 NGRRIHQAEIRVNWAYQSNQS 167
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 87/221 (39%), Gaps = 36/221 (16%)
Query: 4 AYSDDLSPEERDART--IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIA 61
AY + S +E IF LS + L + FS+ G V + R++ KT R +G
Sbjct: 161 AYQSNQSSKEDTTNHFHIFVGDLSNEVNDEVLMQAFSTFGSVSEARVMWDMKTGRSRGYG 220
Query: 62 YIEFKDPESVPLAMG-LNGQKL------------LGIPIIVQPTQAEKNRAGNTLP---- 104
++ F+D A+ ++G+ L G P I Q T P
Sbjct: 221 FVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQAAMAAMGMTPTTPYGHH 280
Query: 105 NLQPRGTGG-----------PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTG 153
N G Y+G+L T++ L +F+ FG + + D
Sbjct: 281 NFPTHGVQSYDMIVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD---- 336
Query: 154 RSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDR 194
+G+ F+ + ++A A QL+G+ + GRP+K DR
Sbjct: 337 --RGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDR 375
>gi|255080002|ref|XP_002503581.1| predicted protein [Micromonas sp. RCC299]
gi|226518848|gb|ACO64839.1| predicted protein [Micromonas sp. RCC299]
Length = 597
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 29/232 (12%)
Query: 16 ARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM 75
A +++C L L E FS++G V +R+ TRR G AY+ F+ A+
Sbjct: 19 ATSLYCGDLDSNCTEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFQQGADAARAI 78
Query: 76 G-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGI 134
LN + G PI + +Q + P L+ G G ++I +L I L
Sbjct: 79 DVLNFNVVNGKPIRIMYSQRD--------PALRKSGVG---NIFIKNLDKEIDNKALYDT 127
Query: 135 FEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDR 194
F FG I + ++ D G SKGYGF+ F + A++A +++NG L + + VG R
Sbjct: 128 FSQFGNIVSAKVAAD-GQGVSKGYGFVQFAEQEAAQQAIDKVNGMLLNDKQVYVGPFQRR 186
Query: 195 NESVGGGPS------------NLDTDEMERAGVDLGATGRLQLMFKLAEGTG 234
E GGGP+ ++D D+++ GA G+L + + +G G
Sbjct: 187 GER-GGGPTTFNNVYVKNLHESVDEDKLKEV---FGAVGKLTSVVIMKDGEG 234
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
IF L + I + L + FS G + + + + KG +++F + E+ A+
Sbjct: 109 NIFIKNLDKEIDNKALYDTFSQFGNIVSAK-VAADGQGVSKGYGFVQFAEQEAAQQAIDK 167
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM---RLYIGSLHFNITEDMLRG 133
+NG L + V P Q R G GP +Y+ +LH ++ ED L+
Sbjct: 168 VNGMLLNDKQVYVGPFQRRGERGG------------GPTTFNNVYVKNLHESVDEDKLKE 215
Query: 134 IFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFE 180
+F GK+ ++ +M D + G+SKG+GF+ F ++ A +A E+L+G++
Sbjct: 216 VFGAVGKLTSVVIMKDGE-GKSKGFGFVCFEESEAASEAVEKLDGYD 261
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 9/179 (5%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-G 76
++ L + + L+E F +VGK+ V +I + + KG ++ F++ E+ A+
Sbjct: 198 NVYVKNLHESVDEDKLKEVFGAVGKLTSV-VIMKDGEGKSKGFGFVCFEESEAASEAVEK 256
Query: 77 LNG-QKLLGIPIIVQPTQAEKNRAGNTLPNLQPR-----GTGGPMRLYIGSLHFNITEDM 130
L+G K+ +V Q + R LYI +L + +
Sbjct: 257 LDGYDKIEDKAWVVCRAQKKAEREAELKAKFDAERRERLEKMAGANLYIKNLEDTVDDAK 316
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
LR +F FG I + ++M D +G S+G F+ F SAD+A +A ++NG +P+ V
Sbjct: 317 LRELFAEFGTITSCRVMRDA-SGASRGSAFVAFSSADEATRAVTEMNGKMAGTKPLYVA 374
>gi|255576617|ref|XP_002529199.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223531377|gb|EEF33213.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 422
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 23/218 (10%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E F+S G V +LI K+
Sbjct: 35 IEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVESCKLIRKEKSS--- 91
Query: 59 GIAYIEFKDPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
+I + D S LA + LNG+ L G PI V A R T G +
Sbjct: 92 -YGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQR----------EDTSGHYNI 140
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F + + ++M D TGRS+G+GF++F + DA+ A L
Sbjct: 141 FVGDLSPEVTDATLFACFSVYHSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 200
Query: 178 GFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGV 215
G L R ++ N + G SN D + V
Sbjct: 201 GKWLGSRQIRC------NWATKGATSNDDKQSSDAKSV 232
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 86 PIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQ 145
P ++ P Q E +GN P P +Y+G++H +TE +L+ +F G +++ +
Sbjct: 27 PGLLAPPQIEPIPSGNLPPGFDPSTC---RSVYVGNIHTQVTEPLLQEVFASTGPVESCK 83
Query: 146 LMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
L+ + YGFI + A A LNG L G+P+KV
Sbjct: 84 LIRKEKS----SYGFIHYFDRRSAALAILSLNGRHLFGQPIKV 122
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 66/190 (34%), Gaps = 46/190 (24%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
DLSPE DA C FS D R++ KT R +G ++ F++
Sbjct: 144 DLSPEVTDATLFAC---------------FSVYHSCSDARVMWDQKTGRSRGFGFVSFRN 188
Query: 68 PESVPLAMGLNGQKLLG-----------------------IPIIVQPTQAEKNRAGNTLP 104
+ A+ K LG +V+ T T
Sbjct: 189 QQDAQSAINDLTGKWLGSRQIRCNWATKGATSNDDKQSSDAKSVVELTNGSSEEGKETAN 248
Query: 105 NLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGK--IDNIQLMVDPDTGRSKGYGFIT 162
N P +Y+G+L +T+ L F G I+ +++ R KG+GF+
Sbjct: 249 NDAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQ------RDKGFGFVR 302
Query: 163 FHSADDAKKA 172
F + +A A
Sbjct: 303 FSTHAEAALA 312
>gi|332820240|ref|XP_526690.3| PREDICTED: polyadenylate-binding protein 4-like [Pan troglodytes]
Length = 428
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 100/180 (55%), Gaps = 9/180 (5%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
+F L + I + L E FS+ GK+ ++++ ++ KG A++ F++ + A+
Sbjct: 157 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGS--KGYAFVHFQNQSAADRAIEE 214
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
+NG+ L G + V + K+R L+ + + +YI + ++ ++ L+ +F
Sbjct: 215 MNGKLLKGCKVFVGRFKNRKDRE----AELRSKASEFT-NIYIKNFGGDMDDERLKDVFS 269
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
+GK ++++M D +G+SKG+GF++F S + AKKA E++NG ++ G+ + VG + E
Sbjct: 270 KYGKTLSVKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVE 328
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQ- 90
L++ FS GK V+++T + + + KG ++ F E+ A+ +NG+ + G I V
Sbjct: 264 LKDVFSKYGKTLSVKVMT-DSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGR 322
Query: 91 -----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQ 145
QAE + L + RG G ++LYI +L I ++ LR F FG I ++
Sbjct: 323 AQKKVERQAELKQMFEQLKRERIRGCQG-VKLYIKNLDDTIDDEKLRNEFSSFGSISRVK 381
Query: 146 LMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+M + G+SKG+G I F S +DA KA ++NG L +P+ +
Sbjct: 382 VM--QEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSI 422
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 37 FSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQPTQAE 95
FS+VG V +R+ TRR G AY+ F A+ +N + G I + +Q +
Sbjct: 88 FSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDIIKGKSIRLMWSQRD 147
Query: 96 KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS 155
L+ G G ++I +L +I L F FGKI + ++M D D G S
Sbjct: 148 --------AYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSD-DQG-S 194
Query: 156 KGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
KGY F+ F + A +A E++NG L G + VG +R +
Sbjct: 195 KGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKD 235
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G LH ++TED+L F G + +I++ D T RS GY ++ F DA+KA + +
Sbjct: 70 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTM 129
Query: 177 NGFELAGRPMKV 188
N + G+ +++
Sbjct: 130 NFDIIKGKSIRL 141
>gi|297674344|ref|XP_002815190.1| PREDICTED: polyadenylate-binding protein 4-like [Pongo abelii]
Length = 428
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 100/180 (55%), Gaps = 9/180 (5%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
+F L + I + L E FS+ GK+ ++++ ++ KG A++ F++ + A+
Sbjct: 157 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGS--KGYAFVHFQNQSAADRAIEE 214
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
+NG+ L G + V + K+R L+ + + +YI + ++ ++ L+ +F
Sbjct: 215 MNGKLLKGCKVFVGRFKNRKDRE----AELRSKASE-FTNIYIKNFGGDMDDERLKDVFS 269
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
+GK ++++M D +G+SKG+GF++F S + AKKA E++NG ++ G+ + VG + E
Sbjct: 270 KYGKTLSVKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVE 328
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%), Gaps = 11/163 (6%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQP 91
L++ FS GK V+++T + + + KG ++ F E+ A+ +NG+ + G I V
Sbjct: 264 LKDVFSKYGKTLSVKVMT-DSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGR 322
Query: 92 TQ------AEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQ 145
Q AE + L + G G ++LYI +L I ++ LR F FG I ++
Sbjct: 323 AQKKVERQAELKQMFEQLKRERICGCQG-VKLYIKNLDDTIDDEKLRNEFSSFGSISRVK 381
Query: 146 LMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+M + G+SKG+G I F S +DA KA ++NG L +P+ +
Sbjct: 382 VM--QEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSI 422
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 37 FSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQPTQAE 95
FS+VG V +R+ TRR G AY+ F A+ +N + G I + +Q +
Sbjct: 88 FSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDIIKGKSIRLMWSQRD 147
Query: 96 KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS 155
L+ G G ++I +L +I L F FGKI + ++M D D G S
Sbjct: 148 --------AYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSD-DQG-S 194
Query: 156 KGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
KGY F+ F + A +A E++NG L G + VG +R +
Sbjct: 195 KGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKD 235
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G LH ++TED+L F G + +I++ D T RS GY ++ F DA+KA + +
Sbjct: 70 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTM 129
Query: 177 NGFELAGRPMKV 188
N + G+ +++
Sbjct: 130 NFDIIKGKSIRL 141
>gi|397485813|ref|XP_003814033.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Pan paniscus]
Length = 427
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 100/180 (55%), Gaps = 9/180 (5%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
+F L + I + L E FS+ GK+ ++++ ++ KG A++ F++ + A+
Sbjct: 156 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGS--KGYAFVHFQNQSAADRAIEE 213
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
+NG+ L G + V + K+R L+ + + +YI + ++ ++ L+ +F
Sbjct: 214 MNGKLLKGCKVFVGRFKNRKDRE----AELRSKASE-FTNIYIKNFGGDMDDERLKDVFS 268
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
+GK ++++M D +G+SKG+GF++F S + AKKA E++NG ++ G+ + VG + E
Sbjct: 269 KYGKTLSVKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVE 327
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQ- 90
L++ FS GK V+++T + + + KG ++ F E+ A+ +NG+ + G I V
Sbjct: 263 LKDVFSKYGKTLSVKVMT-DSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGR 321
Query: 91 -----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQ 145
QAE + L + RG G ++LYI +L I ++ LR F FG I ++
Sbjct: 322 AQKKVERQAELKQMFEQLKRERIRGCQG-VKLYIKNLDDTIDDEKLRNEFSSFGSISRVK 380
Query: 146 LMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+M + G+SKG+G I F S +DA KA ++NG L +P+ +
Sbjct: 381 VM--QEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSI 421
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 37 FSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQPTQAE 95
FS+VG V +R+ TRR G AY+ F A+ +N + G I + +Q +
Sbjct: 87 FSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDIIKGKSIRLMWSQRD 146
Query: 96 KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS 155
L+ G G ++I +L +I L F FGKI + ++M D D G S
Sbjct: 147 --------AYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSD-DQG-S 193
Query: 156 KGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
KGY F+ F + A +A E++NG L G + VG +R +
Sbjct: 194 KGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKD 234
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G LH ++TED+L F G + +I++ D T RS GY ++ F DA+KA + +
Sbjct: 69 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTM 128
Query: 177 NGFELAGRPMKV 188
N + G+ +++
Sbjct: 129 NFDIIKGKSIRL 140
>gi|406946955|gb|EKD77999.1| glycine-rich RNA-binding protein, partial [uncultured bacterium]
Length = 107
Score = 79.0 bits (193), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
++Y+G+L +N TED LR F +G I+ I+L++D +TGRSKG+GFIT+ SA D + A
Sbjct: 5 KIYVGNLSYNTTEDGLRDYFSQYGTIEEIKLIIDFNTGRSKGFGFITYGSAQDCENALAA 64
Query: 176 LNGFELAGRPMKVGTVTD 193
NG EL GR +KV D
Sbjct: 65 -NGVELDGRKLKVNIARD 81
>gi|156398787|ref|XP_001638369.1| predicted protein [Nematostella vectensis]
gi|156225489|gb|EDO46306.1| predicted protein [Nematostella vectensis]
Length = 504
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 31/186 (16%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLN 78
++ ++ +R + F G + + L + KG A++E+ PE+ LA+
Sbjct: 66 VYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQM 125
Query: 79 GQKLLG---------------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLH 123
LLG P+I Q Q K A R+YI S+H
Sbjct: 126 NGVLLGGRNIKVGRPSNVPQAAPLIEQFEQEAKKYA----------------RIYIASVH 169
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
++ ED ++ +FE FGK+ + L +P TG+ KGYGFI + + A A +N F+L G
Sbjct: 170 PDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMNLFDLGG 229
Query: 184 RPMKVG 189
+ ++VG
Sbjct: 230 QFLRVG 235
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS++F + E+ +R F PFG I+ I L DP + KG+ F+ + + A+ A EQ
Sbjct: 65 RVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQ 124
Query: 176 LNGFELAGRPMKVG 189
+NG L GR +KVG
Sbjct: 125 MNGVLLGGRNIKVG 138
>gi|313237737|emb|CBY12875.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 107/234 (45%), Gaps = 21/234 (8%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +DA T++ L +++ L E F VG V + + T+ +G ++EF
Sbjct: 4 LTERNQDA-TVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSE 62
Query: 69 ESVPLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
+ A+ LN KL G P+ V N+A + NL G L+IG+L I
Sbjct: 63 DDADYAIKILNMIKLFGKPVRV-------NKASSHQKNLD---VGA--NLFIGNLDPEID 110
Query: 128 EDMLRGIFEPFGKI-DNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
E +L F FG I ++M DPDTG SKG+ FI + S + A A E +NG L RP+
Sbjct: 111 EKLLYDTFSAFGVILQTPKIMRDPDTGNSKGFAFINYSSFEAADAALEAMNGQYLCNRPI 170
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATG-RLQLMFKLAEGTGLELPP 239
+ ++ G G + E A + AT R MF A+G G PP
Sbjct: 171 TISFAFKKD---GKGERHGSAAERLLAAQNPMATNDRPHTMF--ADGVGGNAPP 219
>gi|256072869|ref|XP_002572756.1| fuse-binding protein-interacting repressor siahbp1 [Schistosoma
mansoni]
Length = 520
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 16/178 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
++ ++ ++ L++ FS G ++ V L T++ KG A++EF+ PE+ LA+ +
Sbjct: 97 VYVGSIAYDVKEDSLKQVFSPFGPIKSVNLSWDPSTQKHKGFAFLEFEYPEAAQLAIDQM 156
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQP------RGTGGPMRLYIGSLHFNITEDML 131
NG G Q + R N L N +P R+Y+ +H ++TED +
Sbjct: 157 NGTSFGG-------RQLKVGRPSN-LTNAEPVINELVNEHNLHNRIYVAGIHLDLTEDDV 208
Query: 132 RGIFEPFGKIDNIQLMVDPDTG-RSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+FE FGKI +L DP R +G+G+I + S A A +N F L G+ ++V
Sbjct: 209 SLVFEAFGKIVFCKLQPDPTRPMRHRGFGYIEYESTQSAADAVGSMNQFNLGGQLLRV 266
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ +++ ED L+ +F PFG I ++ L DP T + KG+ F+ F + A+ A +Q
Sbjct: 96 RVYVGSIAYDVKEDSLKQVFSPFGPIKSVNLSWDPSTQKHKGFAFLEFEYPEAAQLAIDQ 155
Query: 176 LNGFELAGRPMKVG 189
+NG GR +KVG
Sbjct: 156 MNGTSFGGRQLKVG 169
>gi|149240785|ref|XP_001526223.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450346|gb|EDK44602.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 601
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 9/180 (5%)
Query: 17 RTIFCMQLSQRIRTRDLEEFFSSVGK-VRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM 75
+ ++ L++ + E FSSV ++ ++L+ +K + A+IEF + E A+
Sbjct: 100 KILYVGNLAKSASEEQINEIFSSVSNPIKSIKLLN-DKNKLGFNYAFIEFNESEDAEKAL 158
Query: 76 G-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGI 134
LNG+ + G I V AG + P +P +++G L + ++ L+
Sbjct: 159 NSLNGKDVNGSDIKVNWAYQSAAIAGGSTPE-EPS-----YNIFVGDLSSEVNDEALKKA 212
Query: 135 FEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDR 194
F FG + +M D T RS+GYGF+TF +DA+ A + +NG L GR ++ + +
Sbjct: 213 FTKFGSLKQAHVMWDMQTSRSRGYGFVTFGKQEDAENALQSMNGEWLGGRAIRCNWASHK 272
>gi|189241054|ref|XP_968171.2| PREDICTED: similar to CG32169 CG32169-PA [Tribolium castaneum]
Length = 525
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 77/167 (46%), Gaps = 11/167 (6%)
Query: 10 SPEE--RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
SP E D +F LS + L E+FS G + +V ++ TRR +G +I F D
Sbjct: 113 SPAEVPNDPGKMFIGGLSWQTSPESLREYFSKYGDITEVMVMKDPATRRSRGFGFITFTD 172
Query: 68 PESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
P SV + +L G I P A RA P+ ++++G L T
Sbjct: 173 PASVDKVLAQGTHELDGKKI--DPKVAFPRRA-------HPKMVTRTKKIFVGGLSAPTT 223
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQE 174
+ ++ FE FG I++ LM D T R +G+GF+TF S D K E
Sbjct: 224 LEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 270
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
P +++IG L + + + LR F +G I + +M DP T RS+G+GFITF K
Sbjct: 121 PGKMFIGGLSWQTSPESLREYFSKYGDITEVMVMKDPATRRSRGFGFITFTDPASVDKVL 180
Query: 174 EQLNGFELAGR 184
Q EL G+
Sbjct: 181 AQ-GTHELDGK 190
>gi|313228939|emb|CBY18091.1| unnamed protein product [Oikopleura dioica]
Length = 505
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 137/313 (43%), Gaps = 50/313 (15%)
Query: 37 FSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAE 95
F + G VR V +I T R KG A++EF+ PE+ LA + G + G + V T +
Sbjct: 147 FETFGPVRSVDMIYDINTGRHKGFAFVEFETPEAAHLACEDMQGATVGGRSVKVGRT-SN 205
Query: 96 KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVD---PDT 152
A + + + R+Y+ S+H N+++D +R +FE FG++ + L+ D P+T
Sbjct: 206 MGMAEHFISQF-AQEAARYNRIYVASVHENLSDDDIRAVFEAFGRVVSCSLVRDVSEPET 264
Query: 153 GRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTV----TDRNESVGGGPSNLDTD 208
GYG+I F + + +A + ++ ++L G+ ++V + +N + D D
Sbjct: 265 --HCGYGYIEFENPESMDEAVKAMDQYDLGGKMLRVCACVVPPSLQNITTSNNKDLKDED 322
Query: 209 EMERAGVDLGATGRLQLMFKLAEGTGLELPPAAASA--LNLAQNAILNSSTPQVSSSTAP 266
+M+ A + L M K E G LP A S+ ++ Q AI + P+ S++T
Sbjct: 323 KMKPAMM-------LSEMIKRTEALGRMLPDAEGSSAPMDTQQKAI---AGPKGSAATEK 372
Query: 267 PIATQCF----------------LLANMFDPATET----------NPTWDVEIRDDVIEE 300
I + L N A +T + D E+ +V EE
Sbjct: 373 SITSSSIEADAQNVTLSGQDQRNFLMNKLSRAPQTRVLVLRNMLKSDELDGEVEAEVTEE 432
Query: 301 CNKHGVGASTVCF 313
C +G V +
Sbjct: 433 CENYGKVTKVVIY 445
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 49/78 (62%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+G++++ + E ++ FE FG + ++ ++ D +TGR KG+ F+ F + + A A E
Sbjct: 128 RIYVGAVNYEVGEATVKTSFETFGPVRSVDMIYDINTGRHKGFAFVEFETPEAAHLACED 187
Query: 176 LNGFELAGRPMKVGTVTD 193
+ G + GR +KVG ++
Sbjct: 188 MQGATVGGRSVKVGRTSN 205
>gi|302409198|ref|XP_003002433.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
gi|261358466|gb|EEY20894.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
Length = 443
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 16/187 (8%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E + R ++ L QR+ L + F + G V++V++I +K ++ ++E+ DP +
Sbjct: 48 EPNKRALYIGGLDQRVTEDVLRQIFETTGHVQNVKIIP-DKNQKGYNYGFVEYDDPGAAA 106
Query: 73 LAM-GLNGQKLLGIPI--IVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITED 129
AM LNG+++ I + Q K N +++G L + ++
Sbjct: 107 RAMQTLNGRRVHEIRVNWAYQSNTTSKEDTSNHF------------HIFVGDLSNEVNDE 154
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
+L F FG + ++M D TGRS+GYGF+ F DA+KA ++G L R ++
Sbjct: 155 ILSQAFAAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCN 214
Query: 190 TVTDRNE 196
+ +
Sbjct: 215 WANQKGQ 221
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 86/220 (39%), Gaps = 52/220 (23%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD-PESVPLAMGL 77
IF LS + L + F++ G V + R++ KT R +G ++ F+D P++ +
Sbjct: 142 IFVGDLSNEVNDEILSQAFAAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSM 201
Query: 78 NGQKL------------LGIPIIVQPTQAEKNRAGNT----------------------- 102
+G+ L G P I Q Q G T
Sbjct: 202 DGEWLGSRAIRCNWANQKGQPSIAQ--QQAMQAMGMTPTTPFGHHQFPAHGMASYEVILA 259
Query: 103 -LPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFI 161
PN Q +Y+G+L T + + +F+ FG + + D +G+ FI
Sbjct: 260 QTPNWQ-------TTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFI 306
Query: 162 TFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGG 201
S + A A Q+NG+ + GRP+K D+ + GG
Sbjct: 307 KMESHEAAAMAICQMNGYNVNGRPLKCSWGKDKTPNAAGG 346
>gi|358383610|gb|EHK21274.1| hypothetical protein TRIVIDRAFT_116557, partial [Trichoderma virens
Gv29-8]
Length = 466
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 10/185 (5%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E + R ++ L QR+ L + F + G V++V++I +K + ++E+ DP +
Sbjct: 73 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIP-DKNAKGYNYGFVEYDDPGAAE 131
Query: 73 LAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDML 131
AM LNG+++ I V + N +++G L + +D+L
Sbjct: 132 RAMQTLNGRRVHQSEIRVNWAYQSNTTSKEDTSNH--------FHIFVGDLSNEVNDDIL 183
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTV 191
F FG + ++M D TGRS+GYGF+ F DA+KA ++G L R ++
Sbjct: 184 LQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA 243
Query: 192 TDRNE 196
+ +
Sbjct: 244 NQKGQ 248
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 85/216 (39%), Gaps = 48/216 (22%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD-PESVPLAMGL 77
IF LS + L + FS+ G V + R++ KT R +G ++ F+D P++ +
Sbjct: 169 IFVGDLSNEVNDDILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSM 228
Query: 78 NGQKLLGIPIIV-------QPTQAEKNRAGNT---------------------------L 103
+G+ L I QP+ A++
Sbjct: 229 DGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPFGHHQFPAHGIASYEMILAQT 288
Query: 104 PNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITF 163
PN Q Y+G+L T + + +F+ FG + + D +G+ FI
Sbjct: 289 PNWQ-------TTCYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKM 335
Query: 164 HSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVG 199
+ ++A A Q+NG+ + GRP+K D+ + G
Sbjct: 336 DTHENAAMAICQMNGYNVNGRPLKCSWGKDKTPNSG 371
>gi|357111564|ref|XP_003557582.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 354
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGL- 77
I+ L +L FS G V DV++I T R +G A++ E A+ +
Sbjct: 123 IYVGNLPYTFTAAELTSVFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKAVQMF 182
Query: 78 NGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTG-GPMRLYIGSLHFNITEDMLR 132
NG L G I V P E+ A R G ++Y G+L + + D L+
Sbjct: 183 NGALLGGRTIRVNFPEVPRGGERAVASAAAAKTSLRVVDDGTYKVYAGNLGWGVRADALK 242
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
FE + +++ + DTGRS+G+GF++F + +DA A + ++G EL GRP+++ ++
Sbjct: 243 TAFEGQPGLLGSRVIFERDTGRSRGFGFVSFQTLEDANAAIQAMDGVELDGRPLRL-SLA 301
Query: 193 DRNESVGGGPSNLDTDEMERA 213
+N G PS + + E A
Sbjct: 302 SQNPPAGSTPSTVLPKQEETA 322
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%)
Query: 104 PNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITF 163
P +P P R+Y+G+L + T L +F G +D++Q++ D T RS+G+ F+T
Sbjct: 110 PRTRPALGQEPGRIYVGNLPYTFTAAELTSVFSEAGSVDDVQIIYDKITDRSRGFAFVTM 169
Query: 164 HSADDAKKAQEQLNGFELAGRPMKV 188
+A++A KA + NG L GR ++V
Sbjct: 170 ATAEEAAKAVQMFNGALLGGRTIRV 194
>gi|168054274|ref|XP_001779557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669038|gb|EDQ55633.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 6/183 (3%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
EE+ ++ L + L E S G V V +I + R +G A++ +
Sbjct: 18 EEQLGSKVYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFVTMASHDDA 77
Query: 72 -PLAMGLNGQKLLGIPIIVQPTQAEKNR-----AGNTLPNLQPRGTGGPMRLYIGSLHFN 125
L L+G + G + V Q++K++ + P R P +L++G++ +
Sbjct: 78 QALINALDGSDMGGRALKVNFPQSQKDKPRFEKSEARPPTADRRPRDDPNKLFVGNIPWG 137
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
E + +F P+G + + +++ D D+GRS+G+GF+T DA+ A E L+G EL GR
Sbjct: 138 CDEAAMTSLFSPYGSVVDAKIVYDRDSGRSRGFGFVTMEKVGDAQTAMENLDGTELDGRE 197
Query: 186 MKV 188
++V
Sbjct: 198 LRV 200
>gi|302926157|ref|XP_003054238.1| hypothetical protein NECHADRAFT_102368 [Nectria haematococca mpVI
77-13-4]
gi|256735179|gb|EEU48525.1| hypothetical protein NECHADRAFT_102368 [Nectria haematococca mpVI
77-13-4]
Length = 507
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 16/185 (8%)
Query: 6 SDDLSPEERDA-RTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIE 64
SD+ + DA T+F LS I L E F + R++T T R +G Y++
Sbjct: 239 SDEAKKTKTDAPTTLFAGSLSWNIDDDALYEAFKEFNGLVGARVVTEKGTGRSRGFGYVD 298
Query: 65 FKDPESVPLAM-GLNGQKLLGI----------PIIVQPTQAEKNRAGNTLPNLQPRGTGG 113
F DPE A + G +L G P P +RA L P
Sbjct: 299 FNDPEGCTKAYEAMQGFELDGRALNLDYANARPADANPAGRAADRAKRHGDTLSPESD-- 356
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
L++G+L F++ +D +R F ++ +++L DPD+G KG+G+++F+S +DAK
Sbjct: 357 --TLFVGNLPFDVDQDAVREFFGEVAEVASVRLPTDPDSGNLKGFGYVSFNSVEDAKAVI 414
Query: 174 EQLNG 178
+ NG
Sbjct: 415 DAKNG 419
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 111 TGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAK 170
T P L+ GSL +NI +D L F+ F + +++ + TGRS+G+G++ F+ +
Sbjct: 247 TDAPTTLFAGSLSWNIDDDALYEAFKEFNGLVGARVVTEKGTGRSRGFGYVDFNDPEGCT 306
Query: 171 KAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDL 217
KA E + GFEL GR + + R P+ D +R G L
Sbjct: 307 KAYEAMQGFELDGRALNLDYANAR--PADANPAGRAADRAKRHGDTL 351
>gi|89272470|emb|CAJ83096.1| OTTXETP00000006403 [Xenopus (Silurana) tropicalis]
Length = 389
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 30/204 (14%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIA----- 61
DD P RT++ LS+ + + + FS +G + ++IT R G +
Sbjct: 3 DDGQP-----RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDSRRVGASVSFPV 57
Query: 62 ----------YIEFKDP-ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRG 110
++EF + ++ +NG+K+LG + V N A T P+ Q +
Sbjct: 58 LPNTNNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKV-------NWA--TTPSSQKKD 108
Query: 111 TGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAK 170
T +++G L IT + ++ F PFGKI + +++ D TG+SKGYGF++F++ DA+
Sbjct: 109 TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAE 168
Query: 171 KAQEQLNGFELAGRPMKVGTVTDR 194
A + G L GR ++ T +
Sbjct: 169 NAIVHMGGQWLGGRQIRTNWATRK 192
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F LS I T D++ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 115 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 174
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + + NT ++ + + +Y G + +TE
Sbjct: 175 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIGSGLTE 234
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F FG+I +++ V P+ KGY FI F + D A A +NG + G +K
Sbjct: 235 QLMRQTFGVFGQI--LEIRVFPE----KGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVK 287
>gi|291084655|ref|NP_001108206.2| polyadenylate-binding protein 4-like [Homo sapiens]
Length = 428
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 100/180 (55%), Gaps = 9/180 (5%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
+F L + I + L E FS+ GK+ ++++ ++ KG A++ F++ + A+
Sbjct: 157 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGS--KGYAFVHFQNQSAADRAIEE 214
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
+NG+ L G + V + K+R L+ + + +YI + ++ ++ L+ +F
Sbjct: 215 MNGKLLKGCKVFVGRFKNRKDRE----AELRSKASE-FTNVYIKNFGGDMDDERLKDVFS 269
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
+GK ++++M D +G+SKG+GF++F S + AKKA E++NG ++ G+ + VG + E
Sbjct: 270 KYGKTLSVKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVE 328
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQ- 90
L++ FS GK V+++T + + + KG ++ F E+ A+ +NG+ + G I V
Sbjct: 264 LKDVFSKYGKTLSVKVMT-DSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGR 322
Query: 91 -----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQ 145
QAE + L + RG G ++LYI +L I ++ LR F FG I ++
Sbjct: 323 AQKKVERQAELKQMFEQLKRERIRGCQG-VKLYIKNLDDTIDDEKLRNEFSSFGSISRVK 381
Query: 146 LMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+M + G+SKG+G I F S +DA KA ++NG L +P+ +
Sbjct: 382 VM--QEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSI 422
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 37 FSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQPTQAE 95
FS+VG V +R+ TRR G AY+ F A+ +N + G I + +Q +
Sbjct: 88 FSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDIIKGKSIRLMWSQRD 147
Query: 96 KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS 155
L+ G G ++I +L +I L F FGKI + ++M D D G S
Sbjct: 148 --------AYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSD-DQG-S 194
Query: 156 KGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
KGY F+ F + A +A E++NG L G + VG +R +
Sbjct: 195 KGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKD 235
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G LH ++TED+L F G + +I++ D T RS GY ++ F DA+KA + +
Sbjct: 70 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTM 129
Query: 177 NGFELAGRPMKV 188
N + G+ +++
Sbjct: 130 NFDIIKGKSIRL 141
>gi|238505292|ref|XP_002383875.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|317151540|ref|XP_001824733.2| nucleolin protein Nsr1 [Aspergillus oryzae RIB40]
gi|220689989|gb|EED46339.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|391872083|gb|EIT81226.1| nuclear localization sequence binding protein [Aspergillus oryzae
3.042]
Length = 525
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 10/186 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-- 76
+F LS + L+ F G++ VR++T T R +G Y+E+ + A
Sbjct: 282 LFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAK 341
Query: 77 ----LNGQKLLGIPIIVQPTQAEK----NRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
++G+K+ +P E+ +RA + + + L++G++ F+ E
Sbjct: 342 RDTEIDGRKINLDYATGRPANREQGGFQDRAQARARSFGDQASPESDTLFVGNIPFSANE 401
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
D L +F G I I+L DP++GR KG+G++ F S ++A++A +LNG E+ GRP+++
Sbjct: 402 DSLHEVFGQKGSILGIRLPTDPESGRPKGFGYVQFSSVEEAREAFNELNGAEIDGRPVRL 461
Query: 189 GTVTDR 194
T R
Sbjct: 462 DFSTPR 467
>gi|17510027|ref|NP_491177.1| Protein RNP-6, isoform a [Caenorhabditis elegans]
gi|373220164|emb|CCD72564.1| Protein RNP-6, isoform a [Caenorhabditis elegans]
Length = 339
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 13/193 (6%)
Query: 5 YSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIE 64
YS LS R I+ +S IR L F G ++ + + T K A++E
Sbjct: 94 YSQALSIMSR----IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVE 149
Query: 65 FKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQP------RGTGGPMRL 117
++ PE+ LA +NGQ L G + V ++ R +P QP + R+
Sbjct: 150 YEVPEAALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRV 209
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS-KGYGFITFHSADDAKKAQEQL 176
Y+ S+H +++E L+ +FE FG+I QL P TGR +G+G++ F++ +A +
Sbjct: 210 YVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 177 NGFELAGRPMKVG 189
N F+L G+ ++VG
Sbjct: 269 NMFDLGGQYLRVG 281
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F I EDMLR F+PFG I +I + DP TG K + F+ + + A AQE
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 176 LNGFELAGRPMKVGTV 191
+NG L GR +KV ++
Sbjct: 163 MNGQMLGGRNLKVNSM 178
>gi|332022211|gb|EGI62526.1| Poly(U)-binding-splicing factor half pint [Acromyrmex echinatior]
Length = 609
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 95/186 (51%), Gaps = 2/186 (1%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
++ +S ++ + + F G ++ + + T++ KG A++E++ PE+ LA+ +
Sbjct: 138 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 197
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG + G I V + +A + + + + R+YI S+H ++TED ++ +FE
Sbjct: 198 NGVMIGGRNIKVVGRPSNMPQAQSVIDEITEE-SKHYNRIYIASIHQDLTEDDIKSVFEA 256
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES 197
FG I +L R KGYGFI + + A +A +N F+L G+ ++VG +
Sbjct: 257 FGPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITPPNA 316
Query: 198 VGGGPS 203
+ G PS
Sbjct: 317 LMGPPS 322
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F + ED +R F PFG I +I + DP T + KG+ F+ + + A+ A EQ
Sbjct: 137 RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQ 196
Query: 176 LNGFELAGRPMKV 188
+NG + GR +KV
Sbjct: 197 MNGVMIGGRNIKV 209
>gi|353229125|emb|CCD75296.1| putative fuse-binding protein-interacting repressor siahbp1
[Schistosoma mansoni]
Length = 520
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 16/178 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
++ ++ ++ L++ FS G ++ V L T++ KG A++EF+ PE+ LA+ +
Sbjct: 97 VYVGSIAYDVKEDSLKQVFSPFGPIKSVNLSWDPSTQKHKGFAFLEFEYPEAAQLAIDQM 156
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQP------RGTGGPMRLYIGSLHFNITEDML 131
NG G Q + R N L N +P R+Y+ +H ++TED +
Sbjct: 157 NGTSFGG-------RQLKVGRPSN-LTNAEPVINELVNEHNLHNRIYVAGIHLDLTEDDV 208
Query: 132 RGIFEPFGKIDNIQLMVDPDTG-RSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+FE FGKI +L DP R +G+G+I + S A A +N F L G+ ++V
Sbjct: 209 SLVFEAFGKIVFCKLQPDPTRPMRHRGFGYIEYESTQSAADAVGSMNQFNLGGQLLRV 266
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ +++ ED L+ +F PFG I ++ L DP T + KG+ F+ F + A+ A +Q
Sbjct: 96 RVYVGSIAYDVKEDSLKQVFSPFGPIKSVNLSWDPSTQKHKGFAFLEFEYPEAAQLAIDQ 155
Query: 176 LNGFELAGRPMKVG 189
+NG GR +KVG
Sbjct: 156 MNGTSFGGRQLKVG 169
>gi|50409715|ref|XP_456900.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
gi|49652564|emb|CAG84877.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
Length = 447
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
T+F +LS I L F VG V R+I T + +G Y++F + A+
Sbjct: 199 TLFVGRLSWSIDDEWLRREFEPVGGVISARVIMERSTGKSRGYGYVDFDSKSAAEKALQE 258
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM------RLYIGSLHFNITEDM 130
G++L G PI + + K A N PN G + L++G+L FN D
Sbjct: 259 YQGKELDGRPINLDMSTG-KPHASN--PNTDRAKQFGDVPSAPSDTLFVGNLSFNAERDS 315
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
L F +G + + ++ PDT + KG+G++ F S D+AK A E LNG L GR ++
Sbjct: 316 LFNTFGEYGTVVSCRIPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGEYLDGRACRLDF 375
Query: 191 VTDRNES 197
T R+ S
Sbjct: 376 STPRDNS 382
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 64/108 (59%), Gaps = 5/108 (4%)
Query: 107 QPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSA 166
+P+ P L++G L ++I ++ LR FEP G + + +++++ TG+S+GYG++ F S
Sbjct: 190 KPKTNEEPATLFVGRLSWSIDDEWLRREFEPVGGVISARVIMERSTGKSRGYGYVDFDSK 249
Query: 167 DDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAG 214
A+KA ++ G EL GRP+ + T + + SN +TD ++ G
Sbjct: 250 SAAEKALQEYQGKELDGRPINLDMSTGKPHA-----SNPNTDRAKQFG 292
>gi|50555934|ref|XP_505375.1| YALI0F13475p [Yarrowia lipolytica]
gi|49651245|emb|CAG78182.1| YALI0F13475p [Yarrowia lipolytica CLIB122]
Length = 422
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 32/190 (16%)
Query: 17 RTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG 76
+T+F LS + L + F+ G V R+IT T R KG Y++F A G
Sbjct: 168 KTVFVGGLSWNVDDDWLTKEFADAGAV-SARVITEKATGRSKGFGYVDF--------ASG 218
Query: 77 LNGQKL---------------LGIPIIVQ--PTQAEKNRAGNTLPNL-QPRGTGGPMRLY 118
+ QK L I V+ P Q +++R+ L +P T L+
Sbjct: 219 ADAQKCVEEFQDKEIDGRTVRLDISTNVRQTPEQKQRDRSSQYGDQLSEPADT-----LF 273
Query: 119 IGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
+G+L F+ D L GIF +G + +I+L P+T + KG+G++ F S D+AK A E L+G
Sbjct: 274 VGNLSFDTNRDDLFGIFGEYGSVVSIRLPTHPETEQPKGFGYVQFGSVDEAKAALEGLSG 333
Query: 179 FELAGRPMKV 188
+E GR ++
Sbjct: 334 YEYLGRSFRL 343
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
+++G L +N+ +D L F G + + +++ + TGRSKG+G++ F S DA+K E+
Sbjct: 170 VFVGGLSWNVDDDWLTKEFADAGAV-SARVITEKATGRSKGFGYVDFASGADAQKCVEEF 228
Query: 177 NGFELAGRPMKVGTVTD 193
E+ GR +++ T+
Sbjct: 229 QDKEIDGRTVRLDISTN 245
>gi|297742974|emb|CBI35841.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 17/195 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E F+S G V +L+ K+
Sbjct: 22 IEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKEKSS--- 78
Query: 59 GIAYIEFKDPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
+I + D S LA + LNG+ L G PI V A R T G +
Sbjct: 79 -YGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQR----------EDTSGHFNI 127
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F F + ++M D TGRS+G+GF++F + DA+ A +
Sbjct: 128 FVGDLSPEVTDATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDIT 187
Query: 178 GFELAGRPMKVGTVT 192
G L R ++ T
Sbjct: 188 GKWLGSRQIRCNWAT 202
>gi|350417503|ref|XP_003491454.1| PREDICTED: hypothetical protein LOC100748299 [Bombus impatiens]
Length = 622
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 15 DARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRL-----ITCNKTRRFKGI--------- 60
+ RTIF L + + + L++ F GK+ +RL + N +R I
Sbjct: 340 NERTIFVGNLPKDVTKKQLQKLFKQFGKIDAIRLRGKISKSLNIPKRVAAITNELHPKMK 399
Query: 61 ---AYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
AYI F+ ES A+ +NG+K G I V + +R +
Sbjct: 400 SVYAYIRFESEESTKKALSVNGRKFEGNYIRVDMSMKSNDRYET------------KKSV 447
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
+IG+LHFN+ +D +R F+ G+I +++++ D TG KG+G++ F S D A E L+
Sbjct: 448 FIGNLHFNVDDDSVRNHFKRCGEIQSVRIIRDNQTGVGKGFGYVNFKSEDAVALALE-LD 506
Query: 178 GFELAGRPMKVGTVTDRNESVGG 200
G + R ++V D+++ G
Sbjct: 507 GTTILNREIRVKPNIDQDKRTKG 529
>gi|313240198|emb|CBY32547.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 106/234 (45%), Gaps = 21/234 (8%)
Query: 9 LSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP 68
L+ +DA T++ L +++ L E F VG V + + T+ +G ++EF
Sbjct: 4 LTERNQDA-TVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSE 62
Query: 69 ESVPLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
+ A+ LN KL G P+ V N+A + NL L+IG+L I
Sbjct: 63 DDADYAIKILNMIKLFGKPVRV-------NKASSHQKNLDVGAN-----LFIGNLDPEID 110
Query: 128 EDMLRGIFEPFGKI-DNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
E +L F FG I ++M DPDTG SKG+ FI + S + A A E +NG L RP+
Sbjct: 111 EKLLYDTFSAFGVILQTPKIMRDPDTGNSKGFAFINYSSFEAADAALEAMNGQYLCNRPI 170
Query: 187 KVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATG-RLQLMFKLAEGTGLELPP 239
+ ++ G G + E A + AT R MF A+G G PP
Sbjct: 171 TISFAFKKD---GKGERHGSAAERLLAAQNPMATNDRPHTMF--ADGVGGNAPP 219
>gi|225442061|ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
Length = 420
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 17/195 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E F+S G V +L+ K+
Sbjct: 35 IEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKEKSS--- 91
Query: 59 GIAYIEFKDPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
+I + D S LA + LNG+ L G PI V A R T G +
Sbjct: 92 -YGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQR----------EDTSGHFNI 140
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F F + ++M D TGRS+G+GF++F + DA+ A +
Sbjct: 141 FVGDLSPEVTDATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDIT 200
Query: 178 GFELAGRPMKVGTVT 192
G L R ++ T
Sbjct: 201 GKWLGSRQIRCNWAT 215
>gi|432899442|ref|XP_004076560.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Oryzias latipes]
Length = 328
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 4 AYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
A S L+ + D +F LS + L ++FS G++R+ ++ T+R +G ++
Sbjct: 8 ATSGSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFV 67
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLH 123
F D SV L QK + + P A RA QP+ ++++G L
Sbjct: 68 TFTDAASVDKV--LAQQKHSVLIKTIDPKVAFPRRA-------QPKMVTRTKKIFVGGLS 118
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQE 174
N + ++ FE FGK+D+ LM D T R +G+GFITF S D +K E
Sbjct: 119 ANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCE 169
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
P +++IG L + + D LR F FG+I +M DP T RS+G+GF+TF A K
Sbjct: 20 PGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVL 79
Query: 174 EQ 175
Q
Sbjct: 80 AQ 81
>gi|365758602|gb|EHN00436.1| Pub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 455
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 15/185 (8%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E R ++ L + I L+++F G + +++ I +K + A++E+
Sbjct: 71 ETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIK-IMIDKNNKNVNYAFVEYHQSHDAN 129
Query: 73 LAM-GLNGQKLLG-IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+A+ LNG+++ I I Q++++ + +T L++G L+ N+ ++
Sbjct: 130 IALQTLNGKQIENNIVKINWAFQSQQSSSDDTF------------NLFVGDLNVNVDDET 177
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
LR F+ F + +M D TG S+GYGF++F S DDA+ A + + G +L GRP+++
Sbjct: 178 LRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDTMQGQDLNGRPLRINW 237
Query: 191 VTDRN 195
R+
Sbjct: 238 AAKRD 242
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 89 VQPTQAEKNRAGNTLPNLQPRG--TGG----PMRLYIGSLHFNITEDMLRGIFEPFGKID 142
V TQ E ++ G + P++ P TGG LY+G+L ITED+L+ F+ G I
Sbjct: 44 VNSTQVEDDQ-GESDPSVVPANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIA 102
Query: 143 NIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES----- 197
NI++M+D + ++ Y F+ +H + DA A + LNG ++ +K+ +S
Sbjct: 103 NIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQSSSDDT 161
Query: 198 ----VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGT 233
VG N+D + + A D + +M+ + G+
Sbjct: 162 FNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGS 201
>gi|401825695|ref|XP_003886942.1| RNA binding domain-containing protein [Encephalitozoon hellem ATCC
50504]
gi|392998099|gb|AFM97961.1| RNA binding domain-containing protein [Encephalitozoon hellem ATCC
50504]
Length = 274
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 17/193 (8%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGL 77
T+F +S + DL+ +GKV V + N +R KG Y+EF E V A+ L
Sbjct: 68 TVFIKGISYDLTEYDLKNEMEKIGKVVRVGIPMTNDYKRNKGFGYVEFSKEEDVKKALKL 127
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
+G LG ++V +N+ +T +YI ++ F + L+ FE
Sbjct: 128 DGTVFLGREVVVNMAHPRENKQRHT--------------IYISNIPFECDKRKLKKYFEE 173
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFE---LAGRPMKVGTVTDR 194
G++ + D + R KGYGF+ F + +D +K ++ FE + RP DR
Sbjct: 174 MGEVVGMSFPYDKENDRLKGYGFVDFGNKEDYEKVLKKKLVFEDSSIYQRPAYKNNKEDR 233
Query: 195 NESVGGGPSNLDT 207
+ G GP D+
Sbjct: 234 KDFNGKGPRRNDS 246
>gi|432899438|ref|XP_004076558.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Oryzias latipes]
Length = 328
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 4 AYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
A S L+ + D +F LS + L ++FS G++R+ ++ T+R +G ++
Sbjct: 8 ATSGSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFV 67
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLH 123
F D SV L QK + + P A RA QP+ ++++G L
Sbjct: 68 TFTDAASVDKV--LAQQKHSVLIKTIDPKVAFPRRA-------QPKMVTRTKKIFVGGLS 118
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQE 174
N + ++ FE FGK+D+ LM D T R +G+GFITF S D +K E
Sbjct: 119 ANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCE 169
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
P +++IG L + + D LR F FG+I +M DP T RS+G+GF+TF A K
Sbjct: 20 PGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVL 79
Query: 174 EQ 175
Q
Sbjct: 80 AQ 81
>gi|385305287|gb|EIF49275.1| nuclear localization sequence binding protein [Dekkera bruxellensis
AWRI1499]
Length = 358
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 2 RPAYSDDLSPEERDAR---------TIFCMQLSQRIRTRDLEEFF--SSVGKVRDVRLIT 50
R A D PE + A+ T+F +LS + L++FF +V V R+IT
Sbjct: 84 RKADDDXXEPEAKKAKSEESAEEPGTMFVGRLSWNVDDDGLKQFFVDENVPGVXSARVIT 143
Query: 51 CNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIV-----QPTQAEKN-RAGNTL 103
N + R KG Y++F A+ +G ++ G + + +P + N RA N
Sbjct: 144 ENGSGRSKGFGYVDFDSVAHAEAAVKKYDGAEIDGRAVHLDMAASKPRSSSPNDRANNRA 203
Query: 104 PNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITF 163
+ L++G+L F T D +RG FE FG I+ I++ P T +G+ ++ F
Sbjct: 204 KKYGDTPSEPSDTLFVGNLSFEATMDDVRGAFESFGSIEXIRIPTRPGTEDPRGFAYVQF 263
Query: 164 HSADDAKKAQEQLNGFELAGRPMKVGTVTDR 194
S ++AK A + +NG + GR +++ T R
Sbjct: 264 SSVEEAKAALDGMNGEYINGRSVRLDYSTPR 294
>gi|259515737|sp|P0CB38.1|PAB4L_HUMAN RecName: Full=Polyadenylate-binding protein 4-like;
Short=PABP-4-like; Short=Poly(A)-binding protein 4-like
Length = 370
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 100/180 (55%), Gaps = 9/180 (5%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
+F L + I + L E FS+ GK+ ++++ ++ KG A++ F++ + A+
Sbjct: 99 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGS--KGYAFVHFQNQSAADRAIEE 156
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
+NG+ L G + V + K+R L+ + + +YI + ++ ++ L+ +F
Sbjct: 157 MNGKLLKGCKVFVGRFKNRKDRE----AELRSKASEFT-NVYIKNFGGDMDDERLKDVFS 211
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
+GK ++++M D +G+SKG+GF++F S + AKKA E++NG ++ G+ + VG + E
Sbjct: 212 KYGKTLSVKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVE 270
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQP 91
L++ FS GK V+++T + + + KG ++ F E+ A+ +NG+ + G I V
Sbjct: 206 LKDVFSKYGKTLSVKVMT-DSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGR 264
Query: 92 TQ------AEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQ 145
Q AE + L + RG G ++LYI +L I ++ LR F FG I ++
Sbjct: 265 AQKKVERQAELKQMFEQLKRERIRGCQG-VKLYIKNLDDTIDDEKLRNEFSSFGSISRVK 323
Query: 146 LMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+M + G+SKG+G I F S +DA KA ++NG L +P+ +
Sbjct: 324 VM--QEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSI 364
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 37 FSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQPTQAE 95
FS+VG V +R+ TRR G AY+ F A+ +N + G I + +Q +
Sbjct: 30 FSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDIIKGKSIRLMWSQRD 89
Query: 96 KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS 155
L+ G G ++I +L +I L F FGKI + ++M D D G S
Sbjct: 90 --------AYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSD-DQG-S 136
Query: 156 KGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
KGY F+ F + A +A E++NG L G + VG +R +
Sbjct: 137 KGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKD 177
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G LH ++TED+L F G + +I++ D T RS GY ++ F DA+KA + +
Sbjct: 12 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTM 71
Query: 177 NGFELAGRPMKV 188
N + G+ +++
Sbjct: 72 NFDIIKGKSIRL 83
>gi|332231054|ref|XP_003264711.1| PREDICTED: polyadenylate-binding protein 4-like [Nomascus
leucogenys]
Length = 428
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 100/180 (55%), Gaps = 9/180 (5%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
+F L + I + L E FS+ GK+ ++++ ++ KG A++ F++ + A+
Sbjct: 157 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGS--KGYAFVHFQNQSAADRAIEE 214
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
+NG+ L G + V + K+R L+ + + +YI + ++ ++ L+ +F
Sbjct: 215 MNGKLLKGCKVFVGRFKNRKDREAE----LRSKASE-FTNIYIKNFGGDMDDERLKDVFS 269
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
+GK ++++M D +G+SKG+GF++F S + AKKA E++NG ++ G+ + VG + E
Sbjct: 270 KYGKTLSVKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVE 328
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQ- 90
L++ FS GK V+++T + + + KG ++ F E+ A+ +NG+ + G I V
Sbjct: 264 LKDVFSKYGKTLSVKVMT-DSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGR 322
Query: 91 -----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQ 145
QAE + L + RG G ++LYI +L I ++ LR F FG I ++
Sbjct: 323 AQKKVERQAELKQMFEQLKRERIRGCQG-VKLYIKNLDDTIDDEKLRNEFSSFGSISRVK 381
Query: 146 LMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+M + G+SKG+G I F S +DA KA ++NG L +P+ +
Sbjct: 382 VM--QEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSI 422
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 37 FSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQPTQAE 95
FS+VG V +R+ TRR G AY+ F A+ +N + G I + +Q +
Sbjct: 88 FSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDMIKGKSIRLMWSQRD 147
Query: 96 KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS 155
L+ G G ++I +L +I L F FGKI + ++M D D G S
Sbjct: 148 --------AYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSD-DQG-S 194
Query: 156 KGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
KGY F+ F + A +A E++NG L G + VG +R +
Sbjct: 195 KGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKD 235
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G LH ++TED+L F G + +I++ D T RS GY ++ F DA+KA + +
Sbjct: 70 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTM 129
Query: 177 NGFELAGRPMKV 188
N + G+ +++
Sbjct: 130 NFDMIKGKSIRL 141
>gi|395731713|ref|XP_002811971.2| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40
[Pongo abelii]
Length = 386
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I +T ++EF D +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--ETAGNDPYCFVEFHDDRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+NG+K +G + V P+ +K+ + +T+ + Q + +++G L I
Sbjct: 60 AAALAAMNGRKKMGKEVKVNWATTPSSQKKDTSSSTVVSTQR--SQDHFHVFVGDLSPEI 117
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
T + ++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR +
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 187 KVGTVTDR 194
+ T +
Sbjct: 178 RTNWATRK 185
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPES 70
+D +F LS I T D++ F+ G++ D R++ T + KG ++ F D E+
Sbjct: 103 QDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAEN 162
Query: 71 VPLAMG---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLH 123
MG L G+++ +P + NT + + + +Y G +
Sbjct: 163 AIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVT 222
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+TE ++R F PFG+I +++ V PD KGY F+ F+S + A A +NG + G
Sbjct: 223 SGLTEQLMRQTFSPFGQI--MEIRVFPD----KGYSFVRFNSHESAAHAIVSVNGTTIEG 276
Query: 184 RPMK 187
+K
Sbjct: 277 HVVK 280
>gi|410080926|ref|XP_003958043.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
gi|372464630|emb|CCF58908.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
Length = 412
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 97/185 (52%), Gaps = 14/185 (7%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
TIF +LS I L+ F +G V R+I T R +G Y++F++ E A+
Sbjct: 166 TIFVGRLSWSIDDEWLKNEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKEYAEKAVKE 225
Query: 77 LNGQKLLGIPI-----IVQPTQAEKNRAGN--TLPNLQPRGTGGPMRLYIGSLHFNITED 129
++G+++ G I +P +RA +P+ +P T L++G+L FN D
Sbjct: 226 MHGKEIDGREINCDMSTSKPAAGNNDRAKKFGDVPS-EPSET-----LFLGNLSFNADRD 279
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
+ +F FG+I ++++ P+T + KG+G++ + + +DAKKA + L G + RP+++
Sbjct: 280 NISEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYTNVEDAKKALDALQGEYIDNRPVRLD 339
Query: 190 TVTDR 194
T R
Sbjct: 340 FSTPR 344
>gi|350407885|ref|XP_003488228.1| PREDICTED: probable RNA-binding protein 19-like [Bombus impatiens]
Length = 900
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 22/199 (11%)
Query: 6 SDDLSPEERDARTIFCMQL---SQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY 62
S+D S + + +F ++L + + +++++FF + K + +R+ + + KGIAY
Sbjct: 239 SNDKSKSKHGSIKLFTVKLRGLAYNHKKKNIKQFFHPL-KAKSIRI-----SPKIKGIAY 292
Query: 63 IEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEK---NRAGNTLPNLQPRGTGGPM---- 115
+ FK + + A+ N L G I V +A++ + AGN N++ + +
Sbjct: 293 VGFKTEQHLRKALLKNKSFLDGRQIFVMQYEAKEYNSDEAGNKDDNVRWKKQLEALKSED 352
Query: 116 ------RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDA 169
R++I +L + ITED +R +FE +G I + L +D T + KG+G ITF A+ A
Sbjct: 353 SIAESGRMFIRNLSYTITEDNIRQLFEKYGPISEVNLPIDRTTRKPKGFGTITFLMAEHA 412
Query: 170 KKAQEQLNGFELAGRPMKV 188
KA +L+G L GR + V
Sbjct: 413 VKAYSELDGSILDGRMLHV 431
>gi|326936530|ref|XP_003214306.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Meleagris gallopavo]
Length = 423
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 94/176 (53%), Gaps = 9/176 (5%)
Query: 24 LSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKL 82
LS+ + + + FS +G ++ ++I T ++EF + A+ +NG+K+
Sbjct: 54 LSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFYEHRHAASALAAMNGRKI 111
Query: 83 LGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPF 138
+G + V P+ +K+ + +T+ + Q + +++G L IT + ++ F PF
Sbjct: 112 MGKEVKVNWATTPSSQKKDTSSSTVVSTQ--ASQDHFHVFVGDLSPEITTEDIKAAFAPF 169
Query: 139 GKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDR 194
G+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++ T +
Sbjct: 170 GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK 225
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPES 70
+D +F LS I T D++ F+ G++ D R++ T + KG ++ F D E+
Sbjct: 143 QDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAEN 202
Query: 71 VPLAMG---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLH 123
MG L G+++ +P + NT ++ + + +Y G +
Sbjct: 203 AIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVT 262
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+TE ++R F PFG+I +++ V PD KGY F+ F+S + A A +NG + G
Sbjct: 263 SGLTEQLMRQTFSPFGQI--MEIRVFPD----KGYSFVRFNSHESAAHAIVSVNGTTIEG 316
Query: 184 RPMK 187
+K
Sbjct: 317 HVVK 320
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
Y+G+L ++TE ++ +F G N ++++ DT + Y F+ F+ A A +N
Sbjct: 50 YVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFYEHRHAASALAAMN 107
Query: 178 GFELAGRPMKVGTVT 192
G ++ G+ +KV T
Sbjct: 108 GRKIMGKEVKVNWAT 122
>gi|401838326|gb|EJT42016.1| PUB1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 459
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 15/185 (8%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E R ++ L + I L+++F G + +++ I +K + A++E+
Sbjct: 71 ETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIK-IMIDKNNKNVNYAFVEYHQSHDAN 129
Query: 73 LAM-GLNGQKLLG-IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
+A+ LNG+++ I I Q++++ + +T L++G L+ N+ ++
Sbjct: 130 IALQTLNGKQIENNIVKINWAFQSQQSSSDDTF------------NLFVGDLNVNVDDET 177
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
LR F+ F + +M D TG S+GYGF++F S DDA+ A + + G +L GRP+++
Sbjct: 178 LRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDTMQGQDLNGRPLRINW 237
Query: 191 VTDRN 195
R+
Sbjct: 238 AAKRD 242
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 89 VQPTQAEKNRAGNTLPNLQPRG--TGG----PMRLYIGSLHFNITEDMLRGIFEPFGKID 142
V TQ E ++ G + P++ P TGG LY+G+L ITED+L+ F+ G I
Sbjct: 44 VNSTQVEDDQ-GESDPSVVPANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIA 102
Query: 143 NIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES----- 197
NI++M+D + ++ Y F+ +H + DA A + LNG ++ +K+ +S
Sbjct: 103 NIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQSSSDDT 161
Query: 198 ----VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAEGT 233
VG N+D + + A D + +M+ + G+
Sbjct: 162 FNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGS 201
>gi|82400162|gb|ABB72820.1| oligouridylate binding protein-like protein [Solanum tuberosum]
Length = 417
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 17/195 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R++F + ++ L+E FSS G V +LI K+
Sbjct: 36 IEPIPSGNLPPGFDPSTCRSVFVGNIHPQVTEPLLQEVFSSTGLVEGCKLIRKEKSS--- 92
Query: 59 GIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
+I + D S LA+ LNG+ L G PI V A R T +
Sbjct: 93 -YGFIHYYDRRSAALAIVSLNGRHLFGQPIKVNWAFASGQR----------EDTSSHFNI 141
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ ML F + + ++M D TGRS+G+GF++F + DA+ A L
Sbjct: 142 FVGDLSPEVTDAMLFACFSVYPGCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 201
Query: 178 GFELAGRPMKVGTVT 192
G L R ++ T
Sbjct: 202 GKWLGSRQIRCNWAT 216
>gi|378733387|gb|EHY59846.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 503
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 10/177 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF-KDPESVPLAMGL 77
+F LS + L F G++ VRL+T +T R KG Y+EF ++
Sbjct: 259 LFVGNLSWNVDENWLRSEFEEFGELSGVRLMTDRQTGRSKGFGYVEFVDAADAAKAYAAK 318
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM------RLYIGSLHFNITEDML 131
G +L G P+ V A R+ + P R + G L++G+L F+ T++ +
Sbjct: 319 QGAELDGRPLNVDFANA---RSNDNKPADNRRKSYGDQLGEPTDTLFLGNLSFDCTQEDV 375
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
F P G + I+L D +TG KG+G++TF S D+AK A E + G + RP+++
Sbjct: 376 SEAFAPHGTVMGIRLPTDRETGAPKGFGYVTFGSVDEAKAALEAMQGGYIKNRPIRL 432
>gi|225444661|ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis vinifera]
Length = 429
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E FSS G + +LI K+
Sbjct: 36 IEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSS--- 92
Query: 59 GIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
++++ D S L++ LNG+ L G PI V A R T G +
Sbjct: 93 -YGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWAYASSQR----------EDTSGHYNI 141
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F + + ++M D TGRS+G+GF++F + +A+ A LN
Sbjct: 142 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLN 201
Query: 178 GFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDLGATGRL 223
G L R ++ T + GG ++D + G +G +
Sbjct: 202 GRWLGSRQIRCNWAT---KGAGGNEDKPNSDAKSVVELTNGTSGEV 244
>gi|119625554|gb|EAX05149.1| hCG1647909 [Homo sapiens]
Length = 369
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 100/180 (55%), Gaps = 9/180 (5%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
+F L + I + L E FS+ GK+ ++++ ++ KG A++ F++ + A+
Sbjct: 99 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGS--KGYAFVHFQNQSAADRAIEE 156
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
+NG+ L G + V + K+R L+ + + +YI + ++ ++ L+ +F
Sbjct: 157 MNGKLLKGCKVFVGRFKNRKDRE----AELRSKASEFT-NVYIKNFGGDMDDERLKDVFS 211
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
+GK ++++M D +G+SKG+GF++F S + AKKA E++NG ++ G+ + VG + E
Sbjct: 212 KYGKTLSVKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVE 270
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQP 91
L++ FS GK V+++T + + + KG ++ F E+ A+ +NG+ + G I V
Sbjct: 206 LKDVFSKYGKTLSVKVMT-DSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGR 264
Query: 92 TQ------AEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQ 145
Q AE + L + RG G ++LYI +L I ++ LR F FG I ++
Sbjct: 265 AQKKVERQAELKQMFEQLKRERIRGCQG-VKLYIKNLDDTIDDEKLRNEFSSFGSISRVK 323
Query: 146 LMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+M + G+SKG+G I F S +DA KA ++NG L +P+ +
Sbjct: 324 VM--QEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSI 364
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 37 FSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQPTQAE 95
FS+VG V +R+ TRR G AY+ F A+ +N + G I + +Q +
Sbjct: 30 FSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDIIKGKSIRLMWSQRD 89
Query: 96 KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS 155
L+ G G ++I +L +I L F FGKI + ++M D D G S
Sbjct: 90 --------AYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSD-DQG-S 136
Query: 156 KGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
KGY F+ F + A +A E++NG L G + VG +R +
Sbjct: 137 KGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKD 177
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G LH ++TED+L F G + +I++ D T RS GY ++ F DA+KA + +
Sbjct: 12 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTM 71
Query: 177 NGFELAGRPMKV 188
N + G+ +++
Sbjct: 72 NFDIIKGKSIRL 83
>gi|367006051|ref|XP_003687757.1| hypothetical protein TPHA_0K01910 [Tetrapisispora phaffii CBS 4417]
gi|357526062|emb|CCE65323.1| hypothetical protein TPHA_0K01910 [Tetrapisispora phaffii CBS 4417]
Length = 416
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
EE + TIF +LS I L+ F +G V R++ T R +G Y++F D
Sbjct: 152 EEGEPATIFVGRLSWSIDDEWLKNEFDHIGGVIGARVMLERGTDRSRGYGYVDFSDKSYA 211
Query: 72 PLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRG---TGGPMRLYIGSLHFNIT 127
A+ ++G+++ G I + ++ + N + G + L++G+L FN
Sbjct: 212 EKAIKEMHGKEIDGREINCDMSTSKPAGSNNGADRAKKFGDIPSEPSETLFLGNLSFNAD 271
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
D + +F FG+I +++L P+T + KG+G++ + + DDAKKA E L G + RP++
Sbjct: 272 RDSIWEMFSKFGEIVSVRLPTHPETEQPKGFGYVQYGNIDDAKKALEALQGEYIDNRPVR 331
Query: 188 VGTVT 192
+ T
Sbjct: 332 LDYST 336
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 49/83 (59%)
Query: 112 GGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKK 171
G P +++G L ++I ++ L+ F+ G + ++M++ T RS+GYG++ F A+K
Sbjct: 154 GEPATIFVGRLSWSIDDEWLKNEFDHIGGVIGARVMLERGTDRSRGYGYVDFSDKSYAEK 213
Query: 172 AQEQLNGFELAGRPMKVGTVTDR 194
A ++++G E+ GR + T +
Sbjct: 214 AIKEMHGKEIDGREINCDMSTSK 236
>gi|224060641|ref|XP_002193452.1| PREDICTED: nucleolin [Taeniopygia guttata]
Length = 692
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 93/178 (52%), Gaps = 18/178 (10%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+ERDART+F L RI D+ E F + +VR I NK +G+AY+EFK
Sbjct: 364 KERDARTLFLKNLPYRITEDDIREVFENALEVR----IVMNKDGNSRGMAYVEFKTEAEA 419
Query: 72 PLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
A+ G ++ G +++ T EK++ N G L + +L + TE+
Sbjct: 420 DKALEEKQGTEIEGRAVVIDFT-GEKSQQENQ--------KGESTTLIVNNLSYAATEET 470
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
L+ +F+ K +I++ + + GR KGY F+ F +A+DAK+A LN E+ GR +++
Sbjct: 471 LQEVFK---KASSIRVPQN-NQGRPKGYAFVDFATAEDAKEALNSLNNTEIEGRTIRL 524
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 32/189 (16%)
Query: 10 SPEERDART-----IFCMQLSQRIRTRDLEE-------FFSSVG-KVRDVRLITCNKTRR 56
+PE + +T F M + + +D EE FF +V DVR+ + TRR
Sbjct: 264 APEPKKKKTDGPASAFTMFVGNLVSAKDFEELKTGLREFFGKKNIEVLDVRI---SATRR 320
Query: 57 FKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLP-NLQPRGTGGPM 115
F Y++F E + A+ +NG+KL+G+ + + EK ++ T+ N + R
Sbjct: 321 F---GYVDFSSAEDLDKALQMNGKKLMGVEVKL-----EKAKSKETMKENKKERDA---R 369
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
L++ +L + ITED +R +FE ++++++ D G S+G ++ F + +A KA E+
Sbjct: 370 TLFLKNLPYRITEDDIREVFE---NALEVRIVMNKD-GNSRGMAYVEFKTEAEADKALEE 425
Query: 176 LNGFELAGR 184
G E+ GR
Sbjct: 426 KQGTEIEGR 434
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Query: 15 DARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLA 74
++ T+ LS L+E F +R + N R KG A+++F E A
Sbjct: 453 ESTTLIVNNLSYAATEETLQEVFKKASSIR----VPQNNQGRPKGYAFVDFATAEDAKEA 508
Query: 75 M-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRG 133
+ LN ++ G I ++ + + L++ L + TE+ LR
Sbjct: 509 LNSLNNTEIEGRTIRLEFSSPSWQKGNTNARGGGGGFGQQSKTLFVRGLSEDTTEETLRE 568
Query: 134 IFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
FE G I + +++ D DTG SKG+GF+ F S +DAK A+E + E+ G
Sbjct: 569 SFE--GSI-SARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAMEDGEIDG 615
>gi|384245275|gb|EIE18770.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 351
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 16 ARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM 75
A+ ++ L + L+E FS++G+V ++++I T G +++F D + +A+
Sbjct: 21 AKALYVGNLHPFVTDAMLQEIFSTLGQVGEIKIIKDKLTGLSAGYGFVQFLDHRAADMAL 80
Query: 76 -GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGI 134
LNG+ L G ++ R Q + ++++G L +I + +L
Sbjct: 81 QSLNGRVLHG----------QELRVNWAFQKDQREDSASQFQIFVGDLASDINDKLLCEA 130
Query: 135 FEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDR 194
F+ G D ++M D +TGRSKGYGF++F + DA++A Q++G L R ++ G +
Sbjct: 131 FQSCGCAD-ARVMWDHNTGRSKGYGFVSFKTRADAEQALSQMSGTMLGSRRIRCGWAQHK 189
Query: 195 NES 197
E+
Sbjct: 190 QEN 192
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 17/207 (8%)
Query: 4 AYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
A+ D + IF L+ I + L E F S G D R++ + T R KG ++
Sbjct: 98 AFQKDQREDSASQFQIFVGDLASDINDKLLCEAFQSCG-CADARVMWDHNTGRSKGYGFV 156
Query: 64 EFKDPESVPLAMGLNGQKLLGIPII----VQPTQAEKNRAGNTLPNLQ--PRGTGGP--M 115
FK A+ +LG I Q Q + + + R P
Sbjct: 157 SFKTRADAEQALSQMSGTMLGSRRIRCGWAQHKQENSQASFAAVDRVSTLSRAQADPENA 216
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
+Y+G+L ++++ L+ FG + ++++ R GY F F S DA +A
Sbjct: 217 NVYVGNLAPDVSDAELQTAVSQFGAVLDVKIY------RKGGYAFAQFASHADAVRAIVG 270
Query: 176 LNGFELAGRPMKVGTVTDRNESVGGGP 202
L+G L G+ +K R+++ GGP
Sbjct: 271 LSGQNLGGKALKCS--WGRHQARKGGP 295
>gi|383857431|ref|XP_003704208.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Megachile rotundata]
Length = 443
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLN 78
+F LS +L+ +F G+V D ++ +++ R +G ++ F DP +VPL +
Sbjct: 15 LFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQNG 74
Query: 79 GQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPF 138
+L G I +P N +P+ +GG ++++G L N+TE LR F +
Sbjct: 75 PHQLDGRTIDPKPC--------NPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRTFFNRY 126
Query: 139 GKIDNIQLMVDPDTGRSKGYGFITFHSAD 167
GK+ + +M D + +S+G+GF++F D
Sbjct: 127 GKVMEVVIMYDQEKKKSRGFGFLSFEDED 155
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 12/105 (11%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDA----KK 171
+L++G L + T++ L+ F +G++ + +M + ++GRS+G+GF+TF + +
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 172 AQEQLNGFELAGRPMKVGTVTDRNES-------VGGGPSNL-DTD 208
QL+G + +P T S +GG PSN+ +TD
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKPKRSGGFPKVFLGGLPSNVTETD 118
>gi|347441280|emb|CCD34201.1| hypothetical protein [Botryotinia fuckeliana]
Length = 492
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF-KDPES 70
E+ ++ +F LS I L F G++ R+I+ T R KG Y+EF K ++
Sbjct: 235 EDNGSKNLFVGNLSWNIDDEWLYREFEEFGEISGARVISDKATGRSKGFGYVEFVKSSDA 294
Query: 71 VPLAMGLNGQKLLGIPIIV-----QPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
G + G V + T A + RA N L++G+L F+
Sbjct: 295 AAALAAKKGALIDGREANVDFSTPRDTTAPRERANNRAAQFGDAKNPPSDTLFLGNLSFD 354
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
E+++ F G + N++L D +TG KG+G++TF S +DA A + + G ++AGRP
Sbjct: 355 ADENVVGEAFGEHGTVVNVRLPTDQETGNPKGFGYVTFGSVEDATAAYDAMMGADIAGRP 414
Query: 186 MKVGTVTDRNE 196
+++ T R E
Sbjct: 415 VRLDYATPRPE 425
>gi|168034678|ref|XP_001769839.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678948|gb|EDQ65401.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 133
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
+L+IG L + E+ LR F FG + +++++D DTGRS+G+GF+ F S ++A+ A ++
Sbjct: 46 KLFIGGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEVALQE 105
Query: 176 LNGFELAGRPMKVGTVTDR-NESVGGG 201
++G ELAGR ++V TD+ E+ GGG
Sbjct: 106 MDGRELAGRQIRVDYATDKARETRGGG 132
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQ- 90
L + FSS G V +V++I T R +G ++ F PE +A+ ++G++L G I V
Sbjct: 61 LRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEVALQEMDGRELAGRQIRVDY 120
Query: 91 -PTQAEKNRAGN 101
+A + R G
Sbjct: 121 ATDKARETRGGG 132
>gi|448522704|ref|XP_003868757.1| hypothetical protein CORT_0C04790 [Candida orthopsilosis Co 90-125]
gi|380353097|emb|CCG25853.1| hypothetical protein CORT_0C04790 [Candida orthopsilosis]
Length = 488
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 33/192 (17%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPL 73
+D+ +F L+ L +FS G++ D ++ N T R +G ++ FKDP +V +
Sbjct: 168 KDSGKMFIGGLNWDTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAVDV 227
Query: 74 AMG----LNGQKLLGIPIIVQPTQA----EKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
+ L+G+ ++ P +A +++R G +++IG +
Sbjct: 228 VIKQDHILDGK-------LIDPKRAISREDQDRVG---------------KIFIGGIDPM 265
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGF-ELAGR 184
++E+ F FG I + QLM+D DTGRS+G+GFITF S D + +N F L G+
Sbjct: 266 VSENEFNDFFSKFGTIIDCQLMIDKDTGRSRGFGFITFDSPDAVDRV--CVNKFLTLKGK 323
Query: 185 PMKVGTVTDRNE 196
M+V R +
Sbjct: 324 AMEVKRAAPRGQ 335
>gi|357440093|ref|XP_003590324.1| 33 kDa ribonucleoprotein [Medicago truncatula]
gi|355479372|gb|AES60575.1| 33 kDa ribonucleoprotein [Medicago truncatula]
Length = 311
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
E +R +F L + + L + F G V V ++ + T R +G A++ + E
Sbjct: 103 ESTQSRRLFVGNLPFSLSSSQLAQLFGEAGNVVSVEILYDDITNRSRGFAFVTMGNVEDA 162
Query: 72 PLAMGL-NGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRG-TGGPMRLYIGSLHFN 125
A+ + +G + G I V P ++ + G+T RG P ++Y G+L ++
Sbjct: 163 EEAIRMFDGTTVGGRAIKVNFPEVPIVGKRVQMGSTY-----RGYVDSPHKIYAGNLGWD 217
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
+T LR F + + +++ + + G+S+GYGF++F +A+D + A +NG E+ GRP
Sbjct: 218 MTSQYLRKAFAKQPGLLSAKVVYERNNGKSRGYGFVSFETAEDVEVALSAMNGVEVQGRP 277
Query: 186 MKVGTVTDRNESVGGGPSNLDTDE 209
+++ D + PS+LD ++
Sbjct: 278 LRLKLAVDNRK-----PSSLDQNK 296
>gi|432899440|ref|XP_004076559.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Oryzias latipes]
Length = 347
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 4 AYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
A S L+ + D +F LS + L ++FS G++R+ ++ T+R +G ++
Sbjct: 8 ATSGSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFV 67
Query: 64 EFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLH 123
F D SV L QK + + P A RA QP+ ++++G L
Sbjct: 68 TFTDAASVDKV--LAQQKHSVLIKTIDPKVAFPRRA-------QPKMVTRTKKIFVGGLS 118
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQE 174
N + ++ FE FGK+D+ LM D T R +G+GFITF S D +K E
Sbjct: 119 ANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCE 169
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
P +++IG L + + D LR F FG+I +M DP T RS+G+GF+TF A K
Sbjct: 20 PGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVL 79
Query: 174 EQ 175
Q
Sbjct: 80 AQ 81
>gi|224119532|ref|XP_002331184.1| predicted protein [Populus trichocarpa]
gi|222873305|gb|EEF10436.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 23/218 (10%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E F+S G V +LI K+
Sbjct: 40 IEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKLIRKEKSS--- 96
Query: 59 GIAYIEFKDPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
+I + D + LA + LNG+ L G PI V A R T G +
Sbjct: 97 -YGFIHYFDRRAAALAILSLNGRHLFGQPIKVNWAYASGQR----------EDTSGHFNI 145
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F + + ++M D TGRS+G+GF++F + DA+ A L
Sbjct: 146 FVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 205
Query: 178 GFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGV 215
G L R ++ N + G SN D + V
Sbjct: 206 GKWLGSRQIRC------NWAAKGASSNDDKQSSDSKSV 237
>gi|322708692|gb|EFZ00269.1| cutinase negative acting protein [Metarhizium anisopliae ARSEF 23]
Length = 509
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 16 ARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM 75
A T+F LS I L E F + R++T R +G Y++F+ PE+ A
Sbjct: 259 APTLFAGNLSWNIDDNALAEAFKEFEGLVGARVVTDRDGGRSRGFGYVDFETPEAATKAY 318
Query: 76 -GLNGQKLLGIPIIV----------QPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHF 124
+ G +L G P+ + P +RA ++ P L+IG+L F
Sbjct: 319 EAMQGFELDGRPLNLDYANTRPAESNPRDRATDRAKKHGDSVSPES----ETLFIGNLPF 374
Query: 125 NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFEL 181
+ ++ +R F ++ +++L DPD+G KG+G+++F+S +DAK +QLNG L
Sbjct: 375 DTDQETVRQFFAEVAEVTSVRLPTDPDSGNLKGFGYVSFNSVEDAKTVFQQLNGASL 431
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Query: 94 AEKNRAGNTLPNLQPRG--TGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPD 151
A K R + + P+ T G L+ G+L +NI ++ L F+ F + +++ D D
Sbjct: 237 ASKKRKADEEIDATPKKAKTEGAPTLFAGNLSWNIDDNALAEAFKEFEGLVGARVVTDRD 296
Query: 152 TGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEME 211
GRS+G+G++ F + + A KA E + GFEL GRP+ + R P + TD +
Sbjct: 297 GGRSRGFGYVDFETPEAATKAYEAMQGFELDGRPLNLDYANTR--PAESNPRDRATDRAK 354
Query: 212 RAG 214
+ G
Sbjct: 355 KHG 357
>gi|297738530|emb|CBI27775.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E FSS G + +LI K+
Sbjct: 36 IEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKS---- 91
Query: 59 GIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
++++ D S L++ LNG+ L G PI V A R T G +
Sbjct: 92 SYGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWAYASSQR----------EDTSGHYNI 141
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F + + ++M D TGRS+G+GF++F + +A+ A LN
Sbjct: 142 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLN 201
Query: 178 GFELAGRPMKVGTVTDRNESVGGGPSNLDTD 208
G L R ++ T + GG ++D
Sbjct: 202 GRWLGSRQIRCNWAT---KGAGGNEDKPNSD 229
>gi|270001539|gb|EEZ97986.1| hypothetical protein TcasGA2_TC000381 [Tribolium castaneum]
Length = 591
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 94/174 (54%), Gaps = 6/174 (3%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
++ +S ++ + + F G ++ + + T++ KG A++E++ PE+ LA+ +
Sbjct: 143 VYVGSISFELKEDTIRQSFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 202
Query: 78 NGQKLLG--IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIF 135
NG + G I ++ +P+ + +A + +Q R+Y+ S+H ++TED ++ +F
Sbjct: 203 NGVMIGGRNIKVVGRPSNMPQAQA--VIDEIQEEAKQY-NRIYVASIHPDLTEDDIKSVF 259
Query: 136 EPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
E FG I +L + KGYGFI + +A A +A +N F+L G+ ++VG
Sbjct: 260 EAFGPIIYCKLAQGSSGHKHKGYGFIEYETAQAANEAIASMNLFDLGGQYLRVG 313
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F + ED +R F PFG I +I + DP T + KG+ F+ + + A+ A EQ
Sbjct: 142 RVYVGSISFELKEDTIRQSFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQ 201
Query: 176 LNGFELAGRPMKV 188
+NG + GR +KV
Sbjct: 202 MNGVMIGGRNIKV 214
>gi|426345476|ref|XP_004040437.1| PREDICTED: polyadenylate-binding protein 4-like [Gorilla gorilla
gorilla]
Length = 428
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 99/179 (55%), Gaps = 9/179 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
+F L + I + L E FS+ GK+ ++++ ++ KG A++ F++ + A+ +
Sbjct: 158 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGS--KGYAFVHFQNQSAADRAIEEM 215
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG+ L G + V + K+R L+ + + +YI + + ++ L+ +F
Sbjct: 216 NGKLLKGCKVFVGRFKNRKDRE----AELRSKASEFT-NIYIKNFGGEMDDERLKDVFSK 270
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
+GK ++++M D +G+SKG+GF++F S + AKKA E++NG ++ G+ + VG + E
Sbjct: 271 YGKTLSVKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVE 328
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQ- 90
L++ FS GK V+++T + + + KG ++ F E+ A+ +NG+ + G I V
Sbjct: 264 LKDVFSKYGKTLSVKVMT-DSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGR 322
Query: 91 -----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQ 145
QAE + L + RG G ++LYI +L I ++ LR F FG I ++
Sbjct: 323 AQKKVERQAELKQMFEQLKRERIRGCQG-VKLYIKNLDDTIDDEKLRNEFSSFGSISRVK 381
Query: 146 LMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+M + G+SKG+G I F S +DA KA ++NG L +P+ +
Sbjct: 382 VM--QEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSI 422
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 37 FSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQPTQAE 95
FS+VG V +R+ TRR G AY+ F A+ +N + G I + +Q +
Sbjct: 88 FSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDIIKGKSIRLMWSQRD 147
Query: 96 KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS 155
L+ G G ++I +L +I L F FGKI + ++M D D G S
Sbjct: 148 --------AYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSD-DQG-S 194
Query: 156 KGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
KGY F+ F + A +A E++NG L G + VG +R +
Sbjct: 195 KGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKD 235
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G LH ++TED+L F G + +I++ D T RS GY ++ F DA+KA + +
Sbjct: 70 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTM 129
Query: 177 NGFELAGRPMKV 188
N + G+ +++
Sbjct: 130 NFDIIKGKSIRL 141
>gi|388578824|gb|EIM19158.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 430
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 15/185 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
IF QLS I L+ F +G V+ R+ ++ R +G Y+EF+ E AM
Sbjct: 207 IFVGQLSWNIDDDWLKSEFEQLGPVKTARVQLDRQSGRSRGFGYVEFESHELAVKAMDQF 266
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTG-GPMR------LYIGSLHFNITEDM 130
G+++ G P+ V + + PN + R G R L+IG+L FN ED
Sbjct: 267 AGKEIDGRPVRV-------DLSVPRAPNPEKRAKSFGDQRSDPSNTLFIGNLSFNTNEDR 319
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
+ F FG ++++++ D +TG KG+G+++F D AK A + G EL GR +++
Sbjct: 320 VWEFFGEFGSVESVRVPTDRETGAPKGFGYVSFADVDTAKAAIDGAAGSELDGRVIRLDF 379
Query: 191 VTDRN 195
T ++
Sbjct: 380 STPKD 384
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
++++G L +NI +D L+ FE G + ++ +D +GRS+G+G++ F S + A KA +Q
Sbjct: 206 QIFVGQLSWNIDDDWLKSEFEQLGPVKTARVQLDRQSGRSRGFGYVEFESHELAVKAMDQ 265
Query: 176 LNGFELAGRPMKV 188
G E+ GRP++V
Sbjct: 266 FAGKEIDGRPVRV 278
>gi|147902038|ref|NP_001087561.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
laevis]
gi|51261513|gb|AAH80105.1| MGC84540 protein [Xenopus laevis]
Length = 389
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 94/186 (50%), Gaps = 5/186 (2%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
EE RT++ LS+ + + + FS +G + ++I T ++EF +
Sbjct: 2 EEELPRTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIM--DTAGNDPYCFVEFFEHRHA 59
Query: 72 PLAMG-LNGQKLLGIPIIVQ--PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
++ +NG+K++G + V T + + + N+ + + +++G L IT
Sbjct: 60 AASLAAINGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITT 119
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
D ++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A Q+ G L GR ++
Sbjct: 120 DDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRT 179
Query: 189 GTVTDR 194
T +
Sbjct: 180 NWATRK 185
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPES 70
+D +F LS I T D++ F+ G++ D R++ T + KG ++ F D E+
Sbjct: 103 QDHFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAEN 162
Query: 71 VPLAMG---LNGQKLLGIPIIVQP----TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLH 123
MG L G+++ +P + E N T + + + +Y G +
Sbjct: 163 AIAQMGGQWLGGRQIRTNWATRKPPAPKSTYESNAKQLTYEEVVNQSSPSNCTVYCGGVT 222
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+TE ++R F PFG+I +++ V PD KGY F+ F S + A A +NG + G
Sbjct: 223 SGLTEQLMRQTFSPFGQI--MEVRVFPD----KGYSFVRFSSHESAAHAIVSVNGTTIEG 276
Query: 184 RPMK 187
+K
Sbjct: 277 HVVK 280
>gi|357631053|gb|EHJ78771.1| hypothetical protein KGM_03904 [Danaus plexippus]
Length = 591
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 6/187 (3%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
++ +S ++ + + F G ++ + + T++ KG A++E++ PE+ L++ +
Sbjct: 142 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLSLEQM 201
Query: 78 NGQKLLG--IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIF 135
NG L G I ++ +P+ + +A + +Q R+Y+ S+H +TED ++ +F
Sbjct: 202 NGVMLGGRNIKVVGRPSNMPQAQA--VIDEIQEEAKQYN-RIYVASIHPELTEDDIKNVF 258
Query: 136 EPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRN 195
E FG I +L + KGYGFI + + A +A +N F+L G+ ++VG
Sbjct: 259 EAFGPITYCKLAYGASAHKHKGYGFIEYATLPAALEAIASMNLFDLGGQYLRVGRAITPP 318
Query: 196 ESVGGGP 202
++ G P
Sbjct: 319 NALAGPP 325
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F + ED +R F PFG I +I + DP T + KG+ F+ + + A+ + EQ
Sbjct: 141 RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLSLEQ 200
Query: 176 LNGFELAGRPMKV 188
+NG L GR +KV
Sbjct: 201 MNGVMLGGRNIKV 213
>gi|312377573|gb|EFR24379.1| hypothetical protein AND_11086 [Anopheles darlingi]
Length = 405
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
++ + +F LS +L+ +FS G+V D ++ N+T R +G ++ F DPE+V
Sbjct: 7 DDHEKGKLFVGGLSWETTHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENV 66
Query: 72 PLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDML 131
A+ L G I +P N +P+ TGG ++++G L NITE L
Sbjct: 67 DRALENGPHTLDGRTIDPKPC--------NPRSQHKPKRTGGYPKVFLGGLPPNITETDL 118
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHS 165
R F +G + + +M D + +S+G+GF++F +
Sbjct: 119 RSFFCRYGNVMEVVIMYDQEKKKSRGFGFLSFEN 152
>gi|390460450|ref|XP_002745401.2| PREDICTED: polyadenylate-binding protein 4-like [Callithrix
jacchus]
Length = 384
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 100/179 (55%), Gaps = 9/179 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
+F L + I + L E FS+ GK+ ++++ ++ KG A++ F++ + A+ +
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGS--KGYAFVHFQNQSAADRAIEEM 157
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG+ L G + V ++ K+R L+ + + +YI + ++ ++ L+ +F
Sbjct: 158 NGKLLQGCKVFVGRFKSRKDRE----AELRSKASEFT-NVYIKNFGGDMDDERLKDVFSK 212
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
+GK ++++M D +G+SKG+GF++F S + AKKA E++NG ++ G+ + V + E
Sbjct: 213 YGKTLSVKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVARAQKKVE 270
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQP 91
L++ FS GK V+++T + + + KG ++ F E+ A+ +NG+ + G I V
Sbjct: 206 LKDVFSKYGKTLSVKVMT-DSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVAR 264
Query: 92 TQ------AEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQ 145
Q AE + L + RG ++LY+ +L I ++ LR F FG I ++
Sbjct: 265 AQKKVERQAELKQMFEQLKKERIRGCQ-VVKLYVKNLDDTIDDEKLRNEFSSFGSISRVK 323
Query: 146 LMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
+M + G+SKG+G I F S +DA KA ++NG L +P+ +
Sbjct: 324 VM--QEEGQSKGFGLICFSSPEDALKAMTEMNGRILGSKPLSIA 365
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 37 FSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQPTQAE 95
FS+VG V +R+ TR G AY+ F A+ +N + G I + +Q +
Sbjct: 30 FSTVGPVLSIRICRDQVTRSSLGYAYVNFLHLADAQKALDTMNFDIIKGKSIRLMWSQRD 89
Query: 96 KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS 155
L+ G G ++I +L +I L F FGKI + ++M D D G S
Sbjct: 90 --------AYLRRSGIGN---VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSD-DQG-S 136
Query: 156 KGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
KGY F+ F + A +A E++NG L G + VG R +
Sbjct: 137 KGYAFVHFQNQSAADRAIEEMNGKLLQGCKVFVGRFKSRKD 177
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G LH ++TED+L F G + +I++ D T S GY ++ F DA+KA + +
Sbjct: 12 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRSSLGYAYVNFLHLADAQKALDTM 71
Query: 177 NGFELAGRPMKV 188
N + G+ +++
Sbjct: 72 NFDIIKGKSIRL 83
>gi|255550383|ref|XP_002516242.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223544728|gb|EEF46244.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 358
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E FS+ G + +LI K+
Sbjct: 26 IEPILSGNLPPGFDSTTCRSVYVGNIHPQVTEPLLQEVFSNTGLIEGCKLIRKEKS---- 81
Query: 59 GIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
++++ D S L++ LNG+ L G PI V A R T G +
Sbjct: 82 SYGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWAYASSQR----------EDTSGHFNI 131
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F F + ++M D TGRS+G+GF++F + DA+ A +LN
Sbjct: 132 FVGDLSPEVTDATLYASFALFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELN 191
Query: 178 GFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGV 215
G + R ++ N + G SN D + V
Sbjct: 192 GKWIGSRQIRC------NWAAKGTTSNDDKQSSDAKSV 223
>gi|255582384|ref|XP_002531981.1| Protein gar2, putative [Ricinus communis]
gi|223528378|gb|EEF30417.1| Protein gar2, putative [Ricinus communis]
Length = 436
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 32 DLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQP 91
D+ +F G + +V +T + +F+GIA I FK + A+ L+G + G + +QP
Sbjct: 196 DIRSYFEGCGTITEVDCMTFPDSGKFRGIAIIGFKTEAAAKRALALDGSDMGGFFLKIQP 255
Query: 92 TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPD 151
+ + + + P+ G R+Y+G+L ++ITE+ LR F KI +++ D +
Sbjct: 256 YKTTRTFQAKKVSDFAPKIVEGYNRIYVGNLSWDITEEDLRKFFSGC-KISSVRWGTDKE 314
Query: 152 TGRSKGYGFITF 163
TG +GYG + F
Sbjct: 315 TGEFRGYGHVEF 326
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
++Y+G + + TE+ +R FE G I + M PD+G+ +G I F + AK+A
Sbjct: 182 KVYVGGIPYYSTEEDIRSYFEGCGTITEVDCMTFPDSGKFRGIAIIGFKTEAAAKRAL-A 240
Query: 176 LNGFELAGRPMKV 188
L+G ++ G +K+
Sbjct: 241 LDGSDMGGFFLKI 253
>gi|320167378|gb|EFW44277.1| poly A binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 662
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 7/173 (4%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
+F L + L + FS GK+ V ++ + + KG ++ ++ E A+ L
Sbjct: 226 VFVKNLPEDTTDAALNDMFSKFGKITSVVIMKSSDDDKSKGFGFVCYEKVEDAQAAVNAL 285
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPN-----LQPRGTGGPMRLYIGSLHFNITEDMLR 132
NG +L G + V Q + R L+ + LY+ +L I ED +R
Sbjct: 286 NGTELAGKTLFVARAQKKAEREAELKQRYDALRLERINKYQGINLYVKNLDDAIDEDKIR 345
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
F PFG I ++++M D + G+S+G+GFI F SA++A KA ++NG + G P
Sbjct: 346 TEFAPFGTITSVKIMRD-EKGKSRGFGFICFSSAEEATKAVTEMNGQTIQGFP 397
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 9/195 (4%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
+F L + I + L + FS+ G + +++T KG ++ ++ E+ A+ +
Sbjct: 135 VFIKNLDKTIDNKALLDTFSAFGNILSCKVVTDENGS--KGYGFVHYETQEAAETAIAKV 192
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG + G + V K R G +++ +L + T+ L +F
Sbjct: 193 NGMVINGKQVFVGIFVPRKERV------ELGEGVTKFTNVFVKNLPEDTTDAALNDMFSK 246
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES 197
FGKI ++ +M D +SKG+GF+ + +DA+ A LNG ELAG+ + V + E
Sbjct: 247 FGKITSVVIMKSSDDDKSKGFGFVCYEKVEDAQAAVNALNGTELAGKTLFVARAQKKAER 306
Query: 198 VGGGPSNLDTDEMER 212
D +ER
Sbjct: 307 EAELKQRYDALRLER 321
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
+++ L + L E F+++G V +R+ TRR G AY+ F A+
Sbjct: 46 SLYVGDLHPEVTEAQLFEIFNNIGPVVSIRVCRDAITRRSLGYAYVNFHAAVDAERALDT 105
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
LN + G P + +Q + P ++ G G ++I +L I L F
Sbjct: 106 LNYSLIRGKPCRIMWSQRD--------PAVRKSGLG---NVFIKNLDKTIDNKALLDTFS 154
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
FG I + +++ D + SKGYGF+ + + + A+ A ++NG + G+ + VG R E
Sbjct: 155 AFGNILSCKVVTDENG--SKGYGFVHYETQEAAETAIAKVNGMVINGKQVFVGIFVPRKE 212
Query: 197 SV 198
V
Sbjct: 213 RV 214
>gi|406861752|gb|EKD14805.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 495
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 10/185 (5%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E + R ++ L R+ L + F + G V++V++I ++ F ++E+ DP +
Sbjct: 85 EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNSKGFN-YGFVEYDDPAAAE 143
Query: 73 LAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDML 131
AM LNG+++ I V A ++ N T +++G L + +++L
Sbjct: 144 RAMQTLNGRRVHQAEIRV--NWAYQSNTSNK------EDTSNHFHIFVGDLSNEVNDEVL 195
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTV 191
F FG + ++M D TGRS+GYGF+ F DA+KA ++G L R ++
Sbjct: 196 LQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWA 255
Query: 192 TDRNE 196
+ +
Sbjct: 256 NQKGQ 260
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKG--YGFITFHSADDAKKAQE 174
LY+G L +TED+LR IFE G + N++++ D + SKG YGF+ + A++A +
Sbjct: 91 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKN---SKGFNYGFVEYDDPAAAERAMQ 147
Query: 175 QLNGFELAGRPMKVGTVTDRNES 197
LNG + ++V N S
Sbjct: 148 TLNGRRVHQAEIRVNWAYQSNTS 170
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 36/221 (16%)
Query: 4 AYSDDLSPEERDART--IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIA 61
AY + S +E + IF LS + L + FS+ G V + R++ KT R +G
Sbjct: 164 AYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYG 223
Query: 62 YIEFKDPESVPLAMG-LNGQKL------------LGIPIIVQPTQAEKNRAGNTLP---- 104
++ F++ + A+ ++G+ L G P I Q +T P
Sbjct: 224 FVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMSAMGMTSTTPFGHH 283
Query: 105 NLQPRGT-----------GGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTG 153
+ G +Y+G+L T++ L +F+ FG + + D
Sbjct: 284 HFPTHGVQSYDMIVQQTPAWQTTVYVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD---- 339
Query: 154 RSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDR 194
+G+ F+ + ++A A QL+G+ + GRP+K D+
Sbjct: 340 --RGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDK 378
>gi|453089427|gb|EMF17467.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 501
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 12/167 (7%)
Query: 30 TRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIV 89
TR+ EEF G++ VR+IT + R KG Y+EF + E A+ + LL I
Sbjct: 257 TREFEEF----GELAGVRIITDRDSGRSKGFGYVEFTNAEDAAKALEAKNESLLDNRNIR 312
Query: 90 Q--PTQAEKNRAG-----NTLPNLQPRGTGGPM-RLYIGSLHFNITEDMLRGIFEPFGKI 141
T +K+ AG N G P ++ G+L F+ TED++R F G +
Sbjct: 313 VDFSTPRDKSNAGPQQRSNDRQQKFGDAPGEPTATIWCGNLSFDATEDVVREYFAEHGNV 372
Query: 142 DNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
++I+L D DTG KG+G++ S ++A+ A L G ++ GRP+++
Sbjct: 373 NSIRLPTDRDTGAPKGFGYVEMGSVEEAQAAFNALQGQDVGGRPVRL 419
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
L+IG+L +N+ E+ L FE FG++ ++++ D D+GRSKG+G++ F +A+DA KA E
Sbjct: 242 LFIGNLSWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGFGYVEFTNAEDAAKALEAK 301
Query: 177 NGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAG 214
N L R ++V T R++S GP D ++ G
Sbjct: 302 NESLLDNRNIRVDFSTPRDKS-NAGPQQRSNDRQQKFG 338
>gi|393788677|ref|ZP_10376804.1| hypothetical protein HMPREF1068_03084 [Bacteroides nordii
CL02T12C05]
gi|392654357|gb|EIY48005.1| hypothetical protein HMPREF1068_03084 [Bacteroides nordii
CL02T12C05]
Length = 81
Score = 78.2 bits (191), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 115 MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQE 174
M +Y+G+L +N+ E LR + E +G +++++L+ D DT RSKG+ FI A +AK A
Sbjct: 1 MNMYVGNLSYNVKESDLRQVMEEYGTVESVKLITDRDTRRSKGFAFIEMPEASEAKNAIT 60
Query: 175 QLNGFELAGRPMKVGTVTDRN 195
+LNG E AGRPM V RN
Sbjct: 61 ELNGAEYAGRPMVVKEALPRN 81
Score = 44.3 bits (103), Expect = 0.10, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
++ LS ++ DL + G V V+LIT TRR KG A+IE + A+ L
Sbjct: 3 MYVGNLSYNVKESDLRQVMEEYGTVESVKLITDRDTRRSKGFAFIEMPEASEAKNAITEL 62
Query: 78 NGQKLLGIPIIVQ 90
NG + G P++V+
Sbjct: 63 NGAEYAGRPMVVK 75
>gi|363754371|ref|XP_003647401.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891038|gb|AET40584.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
Length = 448
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 93/179 (51%), Gaps = 13/179 (7%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
TIF +LS I L+ F +G V R+I T R +G Y++F+D A+
Sbjct: 212 TIFVGRLSWSIDDEWLKTEFEHIGGVISARVIYERGTERSRGYGYVDFEDKSYAEKAIKE 271
Query: 77 LNGQKLLGIPIIV-----QPTQAEKNRAGNTLPNL--QPRGTGGPMRLYIGSLHFNITED 129
+ G+++ G PI V +P K ++ QP T L++G+L FN D
Sbjct: 272 MQGKEIDGRPINVDMSTSKPASNPKEDRAKKFGDVPSQPSDT-----LFLGNLSFNADRD 326
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+ +F+ +G I ++++ P+T + KG+G++ + S ++A+KA ++L G + RP+++
Sbjct: 327 NIFELFKDYGSIISVRIPTHPETNQPKGFGYVQYASIEEAQKALDKLQGEYIDNRPVRL 385
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%)
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
P +++G L ++I ++ L+ FE G + + +++ + T RS+GYG++ F A+KA
Sbjct: 210 PATIFVGRLSWSIDDEWLKTEFEHIGGVISARVIYERGTERSRGYGYVDFEDKSYAEKAI 269
Query: 174 EQLNGFELAGRPMKVGTVTDR 194
+++ G E+ GRP+ V T +
Sbjct: 270 KEMQGKEIDGRPINVDMSTSK 290
>gi|164424152|ref|XP_962723.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
gi|157070397|gb|EAA33487.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
Length = 480
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 10/185 (5%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E + R ++ L R+ L + F + G V++V++I +K ++ ++E+ DP +
Sbjct: 87 EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIP-DKNQKGYNYGFVEYDDPGAAE 145
Query: 73 LAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDML 131
AM LNG+++ I V N+ T G +++G L + +++L
Sbjct: 146 RAMQTLNGRRVHQSEIRVNWAYQSNNQ--------NKEDTSGHFHIFVGDLSNEVNDEVL 197
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTV 191
F FG + ++M D TGRS+GYGF+ F DA+KA ++G L R ++
Sbjct: 198 LQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA 257
Query: 192 TDRNE 196
+ +
Sbjct: 258 NQKGQ 262
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 48/211 (22%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD-PESVPLAMGL 77
IF LS + L + FS+ G V + R++ KT R +G ++ F+D P++ +
Sbjct: 183 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSM 242
Query: 78 NGQKL------------LGIPII----------VQPTQAEKNRAGNT------------L 103
+G+ L G P I + PT + T
Sbjct: 243 DGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSYDMIVAQT 302
Query: 104 PNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITF 163
P Q Y+G+L T++ L +F+ FG + + D +G+ FI
Sbjct: 303 PAWQ-------TTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQAD------RGFAFIKM 349
Query: 164 HSADDAKKAQEQLNGFELAGRPMKVGTVTDR 194
+ ++A A QLNG+++ GRP+K D+
Sbjct: 350 DTHENAAMAICQLNGYQVNGRPLKCSWGKDK 380
>gi|17510025|ref|NP_491176.1| Protein RNP-6, isoform b [Caenorhabditis elegans]
gi|373220165|emb|CCD72565.1| Protein RNP-6, isoform b [Caenorhabditis elegans]
Length = 749
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 13/193 (6%)
Query: 5 YSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIE 64
YS LS R I+ +S IR L F G ++ + + T K A++E
Sbjct: 94 YSQALSIMSR----IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVE 149
Query: 65 FKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQP------RGTGGPMRL 117
++ PE+ LA +NGQ L G + V ++ R +P QP + R+
Sbjct: 150 YEVPEAALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRV 209
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS-KGYGFITFHSADDAKKAQEQL 176
Y+ S+H +++E L+ +FE FG+I QL P TGR +G+G++ F++ +A +
Sbjct: 210 YVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 177 NGFELAGRPMKVG 189
N F+L G+ ++VG
Sbjct: 269 NMFDLGGQYLRVG 281
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F I EDMLR F+PFG I +I + DP TG K + F+ + + A AQE
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 176 LNGFELAGRPMKVGTV 191
+NG L GR +KV ++
Sbjct: 163 MNGQMLGGRNLKVNSM 178
>gi|307195017|gb|EFN77085.1| Poly(U)-binding-splicing factor half pint [Harpegnathos saltator]
Length = 561
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 119/253 (47%), Gaps = 5/253 (1%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
++ +S ++ + + F G ++ + + T++ KG A++E++ PE+ LA+ +
Sbjct: 92 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 151
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG + G I V + +A + + + R+YI S+H ++TE+ ++ +FE
Sbjct: 152 NGVMIGGRNIKVVGRPSNMPQAQSVIDEITEESKHY-NRIYIASIHQDLTEEDIKSVFEA 210
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES 197
FG I +L R KGYGFI + + A +A +N F+L G+ ++VG +
Sbjct: 211 FGPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITPPNA 270
Query: 198 VGGGPSNLDTDEMERAGVDLGATGRLQLMFKLAE-GTGLELPPAAASALNLAQNAILNSS 256
+ G PS A AT ++Q M +A L L A+A + A+
Sbjct: 271 LMGPPSGTSMMPTAAAVAAAAATAKIQAMDAVASNAVALGLTKLGAAAPPILNQALPGVV 330
Query: 257 TPQVSSST--APP 267
P ++ +T APP
Sbjct: 331 RPTIAPATIMAPP 343
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
R+Y+GS+ F + ED +R F PFG I +I + DP T + KG+ F+ + + A+ A EQ
Sbjct: 91 RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQ 150
Query: 176 LNGFELAGRPMKV 188
+NG + GR +KV
Sbjct: 151 MNGVMIGGRNIKV 163
>gi|126314629|ref|XP_001373122.1| PREDICTED: nucleolin-like [Monodelphis domestica]
Length = 705
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 20/186 (10%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
++RDART+F L ++ +L+E F ++R + C K KGIAY+EFK V
Sbjct: 372 KDRDARTLFVKNLPYKVTQEELKEVFEDAIEIR----LVCTKDGTPKGIAYVEFKTEADV 427
Query: 72 PLAMG-LNGQKLLGIPIIV----QPTQAEKNRAGNTLP----NLQPRGTGGPMRLYIGSL 122
A+ G ++ G +I+ + +Q ++N G N +P + L + +L
Sbjct: 428 DKALEEKQGTEIDGRALILDYTGEKSQGQENSRGKNNSWSGNNSKPSDS---KTLVLNNL 484
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
++ TE+ L+ +FE K +I L + + GR KGY FI F S +DAK+A N E+
Sbjct: 485 AYSATEESLQEVFE---KATSISLPQN-NQGRPKGYAFIEFASVEDAKEALNSCNNIEIE 540
Query: 183 GRPMKV 188
GR +++
Sbjct: 541 GRAIRL 546
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 27/146 (18%)
Query: 43 VRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQA-EKNRAGN 101
V DVR+ TR+F Y+EF+ E + A+ L+G K+LG + ++ + +K+R
Sbjct: 324 VVDVRI---GATRKF---GYVEFESAEDMEKALELSGSKVLGSEMKLEKAKENKKDRDAR 377
Query: 102 TLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQL-MVDPDTGRSKGYGF 160
T L++ +L + +T++ L+ +FE D I++ +V G KG +
Sbjct: 378 T--------------LFVKNLPYKVTQEELKEVFE-----DAIEIRLVCTKDGTPKGIAY 418
Query: 161 ITFHSADDAKKAQEQLNGFELAGRPM 186
+ F + D KA E+ G E+ GR +
Sbjct: 419 VEFKTEADVDKALEEKQGTEIDGRAL 444
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 16/152 (10%)
Query: 15 DARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLA 74
D++T+ L+ L+E F K + L N+ R KG A+IEF E A
Sbjct: 475 DSKTLVLNNLAYSATEESLQEVFE---KATSISLPQNNQGRP-KGYAFIEFASVEDAKEA 530
Query: 75 M-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRG 133
+ N ++ G I ++ G N PR L++ L + TE+ L+
Sbjct: 531 LNSCNNIEIEGRAIRLE-------LKGQKTANAAPRNQSNKT-LFVKGLSEDTTEETLKD 582
Query: 134 IFEPFGKIDNIQLMVDPDTGRSKGYGFITFHS 165
F G + ++ D +TG SKG+GF+ F+S
Sbjct: 583 SF--HGSV-GARIATDRETGSSKGFGFVDFNS 611
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 117 LYIGSLHFNITEDMLR-GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
L+ G+L+FN T L+ I + F K D +VD G ++ +G++ F SA+D +KA E
Sbjct: 295 LFAGNLNFNKTAAELKTAITDFFAKKD--LTVVDVRIGATRKFGYVEFESAEDMEKALE- 351
Query: 176 LNGFELAGRPMKV 188
L+G ++ G MK+
Sbjct: 352 LSGSKVLGSEMKL 364
>gi|62088002|dbj|BAD92448.1| TIA1 protein variant [Homo sapiens]
Length = 464
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 40 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFHEHRHA 97
Query: 71 VPLAMGLNGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+NG+K++G + V P+ +K+ + +T+ + Q + +++G L I
Sbjct: 98 AAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQR--SQDHFHVFVGDLSPEI 155
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
T + ++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR +
Sbjct: 156 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 215
Query: 187 KVGTVTDR 194
+ T +
Sbjct: 216 RTNWATRK 223
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
+Y G + +TE ++R F PFG+I +++ V PD KGY F+ F+S + A A +
Sbjct: 295 VYCGGVTSGLTEQLMRQTFSPFGQI--MEIRVFPD----KGYSFVRFNSHESAAHAIVSV 348
Query: 177 NGFELAGRPMKV 188
NG + G +K
Sbjct: 349 NGTTIEGHVVKC 360
>gi|301759213|ref|XP_002915456.1| PREDICTED: nucleolysin TIAR-like [Ailuropoda melanoleuca]
Length = 477
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 90/171 (52%), Gaps = 17/171 (9%)
Query: 30 TRDLEE-----FFSSVGKVRDVRLITCNKTRR-FKGIAYIEFKDPESVPLAMGLNGQKLL 83
+RD+ E FS +G + ++IT + + + + + E +D + AM NG+K+L
Sbjct: 119 SRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAM--NGRKIL 176
Query: 84 GIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDN 143
G + V N A T P+ Q + T +++G L IT + ++ F PFGKI +
Sbjct: 177 GKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISD 227
Query: 144 IQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDR 194
+++ D TG+SKGYGF++F++ DA+ A + G L GR ++ T +
Sbjct: 228 ARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRK 278
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F LS I T D++ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 201 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 260
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + + NT ++ + + +Y G + +T+
Sbjct: 261 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 320
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I +++ V P+ KGY F+ F + + A A +NG + G +K
Sbjct: 321 QLMRQTFSPFGQI--MEIRVFPE----KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 373
>gi|344250807|gb|EGW06911.1| Nucleolysin TIA-1 [Cricetulus griseus]
Length = 387
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFHEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+NG+K++G + V P+ +K+ + +T+ + Q + +++G L I
Sbjct: 60 AAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQ--RSQDHFHVFVGDLSPEI 117
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
T + ++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR +
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 187 KVGTVTDR 194
+ T +
Sbjct: 178 RTNWATRK 185
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPES 70
+D +F LS I T D++ F+ G++ D R++ T + KG ++ F D E+
Sbjct: 103 QDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAEN 162
Query: 71 VPLAMG---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLH 123
MG L G+++ +P + NT + + + +Y G +
Sbjct: 163 AIQQMGGQWLGGRQIRTNWATRKPPAPKSTYELNTKQLSYDEVVSQSSPSNCTVYCGGVT 222
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+TE ++R F PFG+I +++ V PD KGY FI F+S + A A +NG + G
Sbjct: 223 SGLTEQLMRQTFSPFGQI--LEIRVFPD----KGYSFIRFNSHESAAHAIVSVNGTTIEG 276
Query: 184 RPMK 187
+K
Sbjct: 277 HVVK 280
>gi|365986018|ref|XP_003669841.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
gi|343768610|emb|CCD24598.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
Length = 426
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
TIF +LS I L++ F +G V R+I T R +G Y++F+D A+
Sbjct: 172 TIFVGRLSWSIDDEWLKKEFEHIGGVVGARVIYERGTDRSRGYGYVDFEDKSYAEKAIQE 231
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNT-------LPNLQPRGTGGPMRLYIGSLHFNITED 129
+ G+++ G PI V + + K GN +P+ +P T L++G+L FN +D
Sbjct: 232 MQGKEIDGRPINVDMSTS-KPAGGNDRAKKFGDVPS-EPSDT-----LFLGNLSFNADKD 284
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
+ F +G+I ++++ P+T + KG+G++ F + +DAKKA E L G + R +++
Sbjct: 285 NIYETFSKYGEIISVRIPTHPETEQPKGFGYVQFSNIEDAKKALEGLQGEYIDNRAVRLD 344
Query: 190 TVTDR 194
T R
Sbjct: 345 YSTPR 349
>gi|84579137|dbj|BAE73002.1| hypothetical protein [Macaca fascicularis]
Length = 385
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFHEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+NG+K++G + V P+ +K+ + +T+ + Q + +++G L I
Sbjct: 60 AAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQR--SQDHFHVFVGDLSPEI 117
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
T + ++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR +
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 187 KVGTVTDR 194
+ T +
Sbjct: 178 RTNWATRK 185
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPES 70
+D +F LS I T D++ F+ G++ D R++ T + KG ++ F D E+
Sbjct: 103 QDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAEN 162
Query: 71 VPLAMG---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLH 123
MG L G+++ +P + NT + + + +Y G +
Sbjct: 163 AIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVT 222
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+TE ++R F PFG+I +++ V PD KGY F+ F+S + A A +NG + G
Sbjct: 223 SGLTEQLMRQTFSPFGQI--MEIRVFPD----KGYSFVRFNSHESAAHAIVSVNGTTIEG 276
Query: 184 RPMK 187
+K
Sbjct: 277 HVVK 280
>gi|60729607|pir||JC7925 nucleolin - common carp
gi|27804344|gb|AAO22235.1| nucleolin [Cyprinus carpio]
Length = 693
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 21/182 (11%)
Query: 10 SPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRL-ITCNKTRRFKGIAYIEFKDP 68
S +ERDART+F L I +L+E F + D+R+ + N + R GIAY+EFK
Sbjct: 355 SKKERDARTLFVKNLPYSITQEELQEVFE---QATDIRIPMGSNGSSR--GIAYLEFKSE 409
Query: 69 ESVPLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR-LYIGSLHFNI 126
M G + G II+ T EK+R G+ R G + L + +L F+
Sbjct: 410 AIAEKTMEEAQGSDVQGRSIIIDFT-GEKSRQGS-------RTVGQANKILVVNNLSFSA 461
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
E+ L+ +FE + + V + GR KG+ F+ F S +DAK+A E N E+ GR +
Sbjct: 462 NEESLQSVFEK-----AVSIRVPQNNGRPKGFAFLEFESVEDAKEALENCNNTEIEGRSI 516
Query: 187 KV 188
++
Sbjct: 517 RL 518
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 83/155 (53%), Gaps = 18/155 (11%)
Query: 33 LEEFFSSVG-KVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQP 91
+ +FFS G +++DVRL K Y++F E + A+GLNG+KL+G P+ +
Sbjct: 292 ISKFFSKEGLEIQDVRLGGSKK------FGYVDFASEEEMQKALGLNGKKLMGQPVKLDK 345
Query: 92 TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPD 151
++ K + ++ R L++ +L ++IT++ L+ +FE + +I++ + +
Sbjct: 346 AKS-KEDSQDSKKERDAR------TLFVKNLPYSITQEELQEVFE---QATDIRIPMGSN 395
Query: 152 TGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
G S+G ++ F S A+K E+ G ++ GR +
Sbjct: 396 -GSSRGIAYLEFKSEAIAEKTMEEAQGSDVQGRSI 429
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query: 56 RFKGIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQ-AEKNRAGNTLPNLQPRGTGG 113
R KG A++EF+ E A+ N ++ G I ++ +Q +G P T
Sbjct: 484 RPKGFAFLEFESVEDAKEALENCNNTEIEGRSIRLEFSQNDRDRSSGGGRGGSGPTKT-- 541
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
L++ L + T+ L+ FE G + N +++ D +TG SKG+GF+ F S D K A+
Sbjct: 542 ---LFVKGLSEDTTDHSLKEAFE--GAV-NARIVTDRETGSSKGFGFVDFDSEGDCKAAK 595
Query: 174 EQLNGFELAG 183
E ++ E+ G
Sbjct: 596 EAMDDGEIDG 605
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 102 TLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFI 161
T P + + G L++G+L+ N D ++ F + +++ D G SK +G++
Sbjct: 259 TPPAKKAKTDGEGFSLFLGNLNSNKDFDEIKSAISKFFSKEGLEIQ-DVRLGGSKKFGYV 317
Query: 162 TFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES 197
F S ++ +KA LNG +L G+P+K+ + +S
Sbjct: 318 DFASEEEMQKAL-GLNGKKLMGQPVKLDKAKSKEDS 352
>gi|387762942|ref|NP_001248687.1| TIA1 cytotoxic granule-associated RNA binding protein [Macaca
mulatta]
gi|84579193|dbj|BAE73030.1| hypothetical protein [Macaca fascicularis]
gi|355565763|gb|EHH22192.1| hypothetical protein EGK_05415 [Macaca mulatta]
gi|355751389|gb|EHH55644.1| hypothetical protein EGM_04890 [Macaca fascicularis]
gi|380816026|gb|AFE79887.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|383421173|gb|AFH33800.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|384949108|gb|AFI38159.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
Length = 386
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFHEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+NG+K++G + V P+ +K+ + +T+ + Q + +++G L I
Sbjct: 60 AAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQR--SQDHFHVFVGDLSPEI 117
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
T + ++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR +
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 187 KVGTVTDR 194
+ T +
Sbjct: 178 RTNWATRK 185
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPES 70
+D +F LS I T D++ F+ G++ D R++ T + KG ++ F D E+
Sbjct: 103 QDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAEN 162
Query: 71 VPLAMG---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLH 123
MG L G+++ +P + NT + + + +Y G +
Sbjct: 163 AIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVT 222
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+TE ++R F PFG+I +++ V PD KGY F+ F+S + A A +NG + G
Sbjct: 223 SGLTEQLMRQTFSPFGQI--MEIRVFPD----KGYSFVRFNSHESAAHAIVSVNGTTIEG 276
Query: 184 RPMK 187
+K
Sbjct: 277 HVVK 280
>gi|390474361|ref|XP_003734771.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Callithrix jacchus]
gi|403260486|ref|XP_003922702.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 386
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFHEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+NG+K++G + V P+ +K+ + +T+ + Q + +++G L I
Sbjct: 60 AAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQR--SQDHFHVFVGDLSPEI 117
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
T + ++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR +
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 187 KVGTVTDR 194
+ T +
Sbjct: 178 RTNWATRK 185
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPES 70
+D +F LS I T D++ F+ G++ D R++ T + KG ++ F D E+
Sbjct: 103 QDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAEN 162
Query: 71 VPLAMG---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLH 123
MG L G+++ +P + NT + + + +Y G +
Sbjct: 163 AIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVT 222
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+TE ++R F PFG+I +++ V PD KGY F+ F+S + A A +NG + G
Sbjct: 223 SGLTEQLMRQTFSPFGQI--MEIRVFPD----KGYSFVRFNSHESAAHAIVSVNGTTIEG 276
Query: 184 RPMK 187
+K
Sbjct: 277 HVVK 280
>gi|126273033|ref|XP_001367857.1| PREDICTED: nucleolysin TIAR isoform 1 [Monodelphis domestica]
Length = 388
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 30/204 (14%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLIT-------CNKTRRFKG 59
DD P RT++ LS+ + + + FS +G + ++IT N + F
Sbjct: 3 DDGQP-----RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSV 57
Query: 60 I--------AYIEFKDP-ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRG 110
+ ++EF + ++ +NG+K+LG + V N A T P+ Q +
Sbjct: 58 LQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKV-------NWA--TTPSSQKKD 108
Query: 111 TGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAK 170
T +++G L IT + ++ F PFGKI + +++ D TG+SKGYGF++F++ DA+
Sbjct: 109 TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAE 168
Query: 171 KAQEQLNGFELAGRPMKVGTVTDR 194
A + G L GR ++ T +
Sbjct: 169 NAIVHMGGQWLGGRQIRTNWATRK 192
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 28/185 (15%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F LS I T D++ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 115 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 174
Query: 76 GLNGQKLLG-------------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSL 122
G GQ L G P Q ++ R + + P+ +Y G +
Sbjct: 175 G--GQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNC----TVYCGGI 228
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
+T+ ++R F PFG+I +++ V P+ KGY F+ F + + A A +NG +
Sbjct: 229 ASGLTDQLMRQTFSPFGQI--MEIRVFPE----KGYSFVRFSTHESAAHAIVSVNGTTIE 282
Query: 183 GRPMK 187
G +K
Sbjct: 283 GHVVK 287
>gi|295789540|pdb|3MD3|A Chain A, Crystal Structure Of The First Two Rrm Domains Of Yeast
Poly Binding Protein (Pub1)
Length = 166
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 17 RTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM- 75
R ++ L + I L+++F G + +++ I +K + A++E+ +A+
Sbjct: 1 RVLYVGNLDKAITEDILKQYFQVGGPIANIK-IMIDKNNKNVNYAFVEYHQSHDANIALQ 59
Query: 76 GLNGQKLLG-IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGI 134
LNG+++ I I Q++++ + +T L++G L+ N+ ++ LR
Sbjct: 60 TLNGKQIENNIVKINWAFQSQQSSSDDTF------------NLFVGDLNVNVDDETLRNA 107
Query: 135 FEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
F+ F + +M D TG S+GYGF++F S DDA+ A + + G +L GRP+++
Sbjct: 108 FKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRI 161
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G+L ITED+L+ F+ G I NI++M+D + ++ Y F+ +H + DA A + L
Sbjct: 3 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTL 61
Query: 177 NGFELAGRPMKVGTVTDRNES---------VGGGPSNLDTDEMERAGVDLGATGRLQLMF 227
NG ++ +K+ +S VG N+D + + A D + +M+
Sbjct: 62 NGKQIENNIVKINWAFQSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMW 121
Query: 228 KLAEGTGLELPPAAASALNLAQNAI 252
+ G+ + ++ + AQNA+
Sbjct: 122 DMQTGSSRGYGFVSFTSQDDAQNAM 146
>gi|168027694|ref|XP_001766364.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682273|gb|EDQ68692.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 405
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
M P S +L P + R+++ + R+ L E F+S+G + +LI +K+
Sbjct: 3 MEPMASGNLPPGFDATSCRSVYVGNIHSRVTEGLLAEVFASLGPLEGCKLIRKDKSS--- 59
Query: 59 GIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
++++ D S A+ LNG+++ G I V A R T G +
Sbjct: 60 -YGFVDYFDHRSAVAALSTLNGRQMFGQSIKVNWAYASGQREDTT---------AGHFNV 109
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F + + ++M D +GRS+G+GF++F S +A+ + ++
Sbjct: 110 FVGDLSAEVTDATLFAAFCIYPSCSDARVMWDQRSGRSRGFGFVSFRSQQEAESSISEMT 169
Query: 178 GFELAGRPMKVGTVTDRNESVGGGPSNLDT 207
G L RP++ N ++ S L T
Sbjct: 170 GKWLGTRPIRCNWAAKTNNTIQADESKLTT 199
>gi|444721742|gb|ELW62457.1| Polyadenylate-binding protein 4-like protein [Tupaia chinensis]
Length = 370
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 99/180 (55%), Gaps = 9/180 (5%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
+F L + I + L E FS+ GK+ ++++ ++ KG A++ F++ + A+
Sbjct: 99 NVFIKNLDRSIDNKTLYEHFSAFGKILSSKVMSDDQGS--KGYAFVHFQNQSAADRAIEE 156
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
+NG+ L + V + K+R L N T +YI + ++ ++ LR +F
Sbjct: 157 MNGKLLKDCKVFVGRFKNRKDREAE-LRNKASEFTN----VYIKNFGDDMDDERLREVFS 211
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
+GK ++++M DP +G+SKG+GF++F + + A+KA E++NG ++ G+ + VG + E
Sbjct: 212 KYGKTLSVKVMTDP-SGKSKGFGFVSFDNHEAAQKAVEEMNGKDINGQLIFVGRAQKKVE 270
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQP 91
L E FS GK V+++T + + + KG ++ F + E+ A+ +NG+ + G I V
Sbjct: 206 LREVFSKYGKTLSVKVMT-DPSGKSKGFGFVSFDNHEAAQKAVEEMNGKDINGQLIFVGR 264
Query: 92 TQAEKNRAGNTLPNLQP------RGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQ 145
Q + R + R G ++LYI +L I ++ LR F FG I ++
Sbjct: 265 AQKKVERQAELKQMFEQQKRERIRKCQG-VKLYIKNLDDTIDDEKLRKEFSSFGSISRVK 323
Query: 146 LMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
+M + G+SKG+G I F S ++A KA ++NG L +P+ +
Sbjct: 324 VM--QEEGQSKGFGLICFSSPEEATKAMTEMNGQILGSKPLNIA 365
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 37 FSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQPTQAE 95
FS+VG V +R+ TRR G AY+ F A+ +N + G I + +Q +
Sbjct: 30 FSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDTMNFDMIKGKSIRLMWSQRD 89
Query: 96 KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS 155
L+ G G ++I +L +I L F FGKI + ++M D D G S
Sbjct: 90 --------ACLRKSGIGN---VFIKNLDRSIDNKTLYEHFSAFGKILSSKVMSD-DQG-S 136
Query: 156 KGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
KGY F+ F + A +A E++NG L + VG +R +
Sbjct: 137 KGYAFVHFQNQSAADRAIEEMNGKLLKDCKVFVGRFKNRKD 177
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G L ++TED+L F G + +I++ D T RS GY ++ F DA+KA + +
Sbjct: 12 LYVGDLSADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDTM 71
Query: 177 NGFELAGRPMKV 188
N + G+ +++
Sbjct: 72 NFDMIKGKSIRL 83
>gi|154296105|ref|XP_001548485.1| hypothetical protein BC1G_12782 [Botryotinia fuckeliana B05.10]
Length = 518
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF-KDPES 70
E+ ++ +F LS I L F G++ R+I+ T R KG Y+EF K ++
Sbjct: 261 EDNGSKNLFVGNLSWNIDDEWLYREFEEFGEISGARVISDKATGRSKGFGYVEFVKSSDA 320
Query: 71 VPLAMGLNGQKLLGIPIIV-----QPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
G + G V + T A + RA N L++G+L F+
Sbjct: 321 AAALAAKKGALIDGREANVDFSTPRDTTAPRERANNRAAQFGDAKNPPSDTLFLGNLSFD 380
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
E+++ F G + N++L D +TG KG+G++TF S +DA A + + G ++AGRP
Sbjct: 381 ADENVVGEAFGEHGTVVNVRLPTDQETGNPKGFGYVTFGSVEDATAAYDAMMGADIAGRP 440
Query: 186 MKVGTVTDRNE 196
+++ T R E
Sbjct: 441 VRLDYATPRPE 451
>gi|82621116|gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
Length = 423
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 15/218 (6%)
Query: 15 DARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLA 74
D RTI+ L Q + L F+ G+V V++I +T + + +IEF E+
Sbjct: 77 DNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKV 136
Query: 75 M-GLNGQKLLGIPIIVQPTQAEKN--RAGNTLPNL-QPRGTGGPMRLYIGSLHFNITEDM 130
+ NG + P QP + + G ++ G+G + +++G L ++T+ M
Sbjct: 137 LQSYNGTMM---PNAEQPFRLNWSAFSTGEKRADVGAAAGSGSDLSIFVGDLASDVTDTM 193
Query: 131 LRGIFEP-FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
LR F + + ++++D +TGRSKGYGF+ F + +A ++NG + R M++G
Sbjct: 194 LRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIG 253
Query: 190 TVTDRNESV-------GGGPSNLDTDEMERAGVDLGAT 220
T + S GG SN + + DL T
Sbjct: 254 VATPKKPSAMQQYSSQGGHASNGAATQTSQTDSDLSNT 291
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSS-VGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG 76
+IF L+ + L + FSS V+ +++ + T R KG ++ F D AM
Sbjct: 179 SIFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMT 238
Query: 77 -LNG------QKLLGI-----PIIVQPTQAEKNRAGN--TLPNLQPRGTGGPMRLYIGSL 122
+NG +G+ P +Q ++ A N Q +++G L
Sbjct: 239 EMNGIYCSSRAMRIGVATPKKPSAMQQYSSQGGHASNGAATQTSQTDSDLSNTTVFVGGL 298
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
++T++ LR F FG + ++++ KG GF+ F A+ A E+LNG
Sbjct: 299 DSDVTDEELRQSFSQFGNVVSVKIPA------GKGCGFVQFSERSAAEDAIEKLNG 348
>gi|6755783|ref|NP_035715.1| nucleolysin TIA-1 isoform 1 [Mus musculus]
gi|1729966|sp|P52912.1|TIA1_MOUSE RecName: Full=Nucleolysin TIA-1; AltName: Full=RNA-binding protein
TIA-1; AltName: Full=T-cell-restricted intracellular
antigen-1; Short=TIA-1
gi|437057|gb|AAA03711.1| TIA [Mus musculus]
gi|1616673|gb|AAC52871.1| RNA binding protein TIA-1 [Mus musculus]
gi|26353510|dbj|BAC40385.1| unnamed protein product [Mus musculus]
gi|74188216|dbj|BAE25782.1| unnamed protein product [Mus musculus]
gi|148666751|gb|EDK99167.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_a
[Mus musculus]
Length = 386
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFHEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+NG+K++G + V P+ +K+ + +T+ + Q + +++G L I
Sbjct: 60 AAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQ--RSQDHFHVFVGDLSPEI 117
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
T + ++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR +
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 187 KVGTVTDR 194
+ T +
Sbjct: 178 RTNWATRK 185
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 82/184 (44%), Gaps = 16/184 (8%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPES 70
+D +F LS I T D++ F+ G++ D R++ T + KG ++ F D E+
Sbjct: 103 QDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAEN 162
Query: 71 VPLAMG---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLH 123
MG L G+++ +P + NT + + + +Y G +
Sbjct: 163 AIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVT 222
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+TE ++R F PFG+I I++ D KGY F+ F S + A A +NG + G
Sbjct: 223 SGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNGTTIEG 276
Query: 184 RPMK 187
+K
Sbjct: 277 HVVK 280
>gi|27924240|gb|AAH45086.1| Tia1 protein, partial [Xenopus laevis]
Length = 427
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 25/194 (12%)
Query: 17 RTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIA--------------- 61
RT++ LS+ + + + FS +G + ++IT R G +
Sbjct: 46 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDGRRVGASVSFPVMPNANNDPYC 105
Query: 62 YIEFKDP-ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIG 120
++EF + ++ +NG+K+LG + V N A T P+ Q + T +++G
Sbjct: 106 FVEFYEHRDAAAALAAMNGRKILGKEVKV-------NWA--TTPSSQKKDTSNHFHVFVG 156
Query: 121 SLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFE 180
L IT + ++ F PFGKI + +++ D TG+SKGYGF++F++ DA+ A + G
Sbjct: 157 DLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQW 216
Query: 181 LAGRPMKVGTVTDR 194
L GR ++ T +
Sbjct: 217 LGGRQIRTNWATRK 230
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F LS I T D++ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 153 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 212
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + + NT ++ + + +Y G + ++E
Sbjct: 213 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSSKNCTVYCGGIGAGLSE 272
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F FG+I +++ V P+ KGY FI F + D A A +NG + G +K
Sbjct: 273 QLMRQTFGVFGQI--LEIRVFPE----KGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVK 325
>gi|296805886|ref|XP_002843767.1| ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238845069|gb|EEQ34731.1| ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 471
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPE-SVPLAMGL 77
+F LS + L F G++ R++T ++ R +G Y+EF + E +V
Sbjct: 235 LFAGNLSWNVDEEWLRSEFEEFGELVGARIVTDRESGRSRGFGYVEFANVEDAVKAHAAK 294
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTG-----GPMR--LYIGSLHFNITEDM 130
+L G + + A N GN R P L++G+L F+ E+
Sbjct: 295 KDAELDGRKLNLDFANARTNAGGNPRERADSRAKSFGDQTSPESDTLFLGNLPFSADENA 354
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
++ +F G I I+L DPD+GR KG+G++ F S D+A+ A E G +L GR +++
Sbjct: 355 VQELFSKHGSILGIRLPTDPDSGRPKGFGYVQFSSVDEARAALEAEYGADLGGRAIRIDF 414
Query: 191 VTDR 194
T R
Sbjct: 415 STPR 418
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 112 GGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKK 171
G L+ G+L +N+ E+ LR FE FG++ +++ D ++GRS+G+G++ F + +DA K
Sbjct: 230 GASANLFAGNLSWNVDEEWLRSEFEEFGELVGARIVTDRESGRSRGFGYVEFANVEDAVK 289
Query: 172 AQEQLNGFELAGRPMKVGTVTDRNESVGGGP 202
A EL GR + + R + GG P
Sbjct: 290 AHAAKKDAELDGRKLNLDFANART-NAGGNP 319
>gi|188219591|ref|NP_071505.2| nucleolysin TIA-1 isoform p40 isoform 2 [Homo sapiens]
gi|114577930|ref|XP_001141557.1| PREDICTED: uncharacterized protein LOC459303 isoform 2 [Pan
troglodytes]
gi|397521824|ref|XP_003830986.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Pan paniscus]
gi|206729905|sp|P31483.3|TIA1_HUMAN RecName: Full=Nucleolysin TIA-1 isoform p40; AltName:
Full=RNA-binding protein TIA-1; AltName:
Full=T-cell-restricted intracellular antigen-1;
Short=TIA-1; AltName: Full=p40-TIA-1
gi|62702267|gb|AAX93193.1| unknown [Homo sapiens]
gi|119620230|gb|EAW99824.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_b [Homo sapiens]
gi|261861076|dbj|BAI47060.1| TIA1 cytotoxic granule-associated RNA binding protein [synthetic
construct]
gi|410226260|gb|JAA10349.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410254978|gb|JAA15456.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298556|gb|JAA27878.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353839|gb|JAA43523.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 386
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFHEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+NG+K++G + V P+ +K+ + +T+ + Q + +++G L I
Sbjct: 60 AAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQR--SQDHFHVFVGDLSPEI 117
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
T + ++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR +
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 187 KVGTVTDR 194
+ T +
Sbjct: 178 RTNWATRK 185
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPES 70
+D +F LS I T D++ F+ G++ D R++ T + KG ++ F D E+
Sbjct: 103 QDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAEN 162
Query: 71 VPLAMG---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLH 123
MG L G+++ +P + NT + + + +Y G +
Sbjct: 163 AIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVT 222
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+TE ++R F PFG+I +++ V PD KGY F+ F+S + A A +NG + G
Sbjct: 223 SGLTEQLMRQTFSPFGQI--MEIRVFPD----KGYSFVRFNSHESAAHAIVSVNGTTIEG 276
Query: 184 RPMK 187
+K
Sbjct: 277 HVVK 280
>gi|47217530|emb|CAG02457.1| unnamed protein product [Tetraodon nigroviridis]
Length = 418
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 12/172 (6%)
Query: 24 LSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKL 82
LS+ + + + F+ +G + ++I T ++EF + ++ +NG+K+
Sbjct: 19 LSRDVTEPLILQVFTQIGPCKSCKMIV--DTAGNDPYCFVEFYEHRHAAASLAAMNGRKI 76
Query: 83 LGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKID 142
+G + V N A T P Q + T +++G L IT D ++ F PFG+I
Sbjct: 77 MGKEVKV-------NWA--TTPTSQKKDTSNHFHVFVGDLSPEITTDDVKAAFGPFGRIS 127
Query: 143 NIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDR 194
+ +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR ++ T +
Sbjct: 128 DARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK 179
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPESVPLAM 75
+F LS I T D++ F G++ D R++ T + KG ++ F D E+ M
Sbjct: 102 VFVGDLSPEITTDDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 161
Query: 76 G---LNGQKLLGIPIIVQP----TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P T E N ++ + + +Y G + +TE
Sbjct: 162 GGQWLGGRQIRTNWATRKPPAPKTTYESNSKQLCFDDVVNQSSPSNCTVYCGGVSTGLTE 221
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG I I++ D KGY F+ F+S + A A +NG + G +K
Sbjct: 222 QLMRQTFSPFGPIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGSSIEGHVVK 274
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
Y+G+L ++TE ++ +F G + +++V DT + Y F+ F+ A + +N
Sbjct: 15 YVGNLSRDVTEPLILQVFTQIGPCKSCKMIV--DTAGNDPYCFVEFYEHRHAAASLAAMN 72
Query: 178 GFELAGRPMKVGTVT 192
G ++ G+ +KV T
Sbjct: 73 GRKIMGKEVKVNWAT 87
>gi|409051430|gb|EKM60906.1| hypothetical protein PHACADRAFT_247129 [Phanerochaete carnosa
HHB-10118-sp]
Length = 425
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 16/195 (8%)
Query: 9 LSPEERDART-IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY--IEF 65
LSP E R ++ LS R+ L E F+ G V+ V++I ++ + G+ Y +E+
Sbjct: 4 LSPAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIP-DRNYQHGGLNYGFVEY 62
Query: 66 KDPESVPLAM-GLNGQKLLGIPIIVQ-PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLH 123
D + A+ LNG+K+ I V Q ++N+ T G +++G L
Sbjct: 63 MDMRAAETALQTLNGRKIFDTEIRVNWAYQGQQNKEDTT----------GHYHVFVGDLS 112
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+ +++L F FG + + ++M D ++G+S+GYGF+ F DA++A +NG L
Sbjct: 113 PEVNDEVLAKAFAAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGS 172
Query: 184 RPMKVGTVTDRNESV 198
R ++V + +
Sbjct: 173 RAIRVNWANQKTQGA 187
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 45/213 (21%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
+F LS + L + F++ G + D R++ + + +G ++ F+D A+ +
Sbjct: 106 VFVGDLSPEVNDEVLAKAFAAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 165
Query: 78 NGQKLLGIPIIV----QPTQ-AEKNRAGNTLP---------------NLQPRGTGGPMR- 116
NG+ L I V Q TQ A RAGN N Q GGP+
Sbjct: 166 NGEWLGSRAIRVNWANQKTQGAPPPRAGNGGNGSDGGHGGGGAPAPMNFQ----GGPLSY 221
Query: 117 -------------LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITF 163
+Y+G+L T+ L +F+ G + I++ D +G+ F+
Sbjct: 222 ESVVQQTPAYNSTVYVGNLVPYATQADLIPLFQSIGYLSEIRMQAD------RGFAFVKL 275
Query: 164 HSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
+ + A A QL G + GRP+K DR +
Sbjct: 276 DTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRAD 308
>gi|356502327|ref|XP_003519971.1| PREDICTED: polyadenylate-binding protein 5-like [Glycine max]
Length = 616
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 94/188 (50%), Gaps = 13/188 (6%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLI--TCNKTRRFKGIAYIEFKDPESVPLAM 75
++ S+ DLE+ FS+ G + ++ T K+R F ++ F+ P+S A+
Sbjct: 185 NVYVKNFSETYTDEDLEQLFSTYGTITSAVVMKDTDGKSRCF---GFVNFESPDSAVAAV 241
Query: 76 ------GLNGQKLLGIPIIVQPTQAEKN-RAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
+N K+L + + + E +A L ++ LY+ +L +NI +
Sbjct: 242 ERLNGTTVNDDKVLYVGRAQRKAEREAELKARFELERIRKYEKYHGTNLYVKNLDYNIND 301
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
D L+ +F FG I + ++M++P+ GRSKGYGF+ F + +A +A ++NG + RP+ V
Sbjct: 302 DKLKELFSEFGTITSCKVMLEPN-GRSKGYGFVAFSAPRNANRALHEMNGKMIGRRPLYV 360
Query: 189 GTVTDRNE 196
+ E
Sbjct: 361 AVAQRKEE 368
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 91/188 (48%), Gaps = 16/188 (8%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-G 76
+++ L + + L + F+ VG + +R + ++T R G AY+ F +P+ AM
Sbjct: 7 SLYVGDLERNVDEAQLFQLFARVGPIFSIR-VCRDETNRSLGYAYVNFVNPQDAANAMEH 65
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
LN L G I V + N P+++ G ++I +L +I L F
Sbjct: 66 LNFTPLNGKSIRVMFS--------NRDPSIRKSGYAN---VFIKNLDISIDNKTLHDTFA 114
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
FG + + ++ VD G+SKGYGF+ F + + A+ A ++LNG + + + VG +R E
Sbjct: 115 AFGFVLSSKVAVD-SIGQSKGYGFVQFDNEESAQNAIKELNGMLINDKKVYVGLFVNRQE 173
Query: 197 --SVGGGP 202
V G P
Sbjct: 174 RAQVDGSP 181
>gi|365760560|gb|EHN02272.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 371
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 94/182 (51%), Gaps = 7/182 (3%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
TIF +LS I L++ F +G V R+I T R +G Y++F++ A+
Sbjct: 142 TIFVGRLSWSIDDEWLKKEFEHIGGVISARVINERGTDRSRGYGYVDFENKSYAEKAIQE 201
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR----LYIGSLHFNITEDMLR 132
+ G+++ G PI + ++ AGN + + P L++G+L FN D +
Sbjct: 202 MQGKEIDGRPINCDLSTSKP--AGNNTNDRAKKFGDTPSEPSDTLFLGNLSFNADRDTIF 259
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
+F G++ ++++ P+T + KG+G++ F S +D+KKA E L G + RP+++ +
Sbjct: 260 ELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSSLEDSKKALESLQGEYIDNRPVRLDYSS 319
Query: 193 DR 194
R
Sbjct: 320 PR 321
>gi|148674413|gb|EDL06360.1| mCG5434 [Mus musculus]
Length = 534
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 9/179 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
IF L I + L + FS+ G + +++ R G ++ F+ E+ A+ +
Sbjct: 101 IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSR--GFGFVHFETHEAAQKAINTM 158
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG L + V ++ + R L R G +Y+ +LH N+ E L+ +F
Sbjct: 159 NGMLLNDRKVFVGHFKSRQKREAE----LGARALGF-TNIYVKNLHANVDEQRLQDLFSQ 213
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
FG + ++++M D + G+S+G+GF+ F ++A+KA + +NG E++G+ + VG R E
Sbjct: 214 FGNMQSVKVMRDSN-GQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKRAE 271
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQP 91
L E FS +G + +R+ TRR G AYI F+ P A+ +N + + G PI +
Sbjct: 27 LYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEVIKGQPIRIMW 86
Query: 92 TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPD 151
+ + P L+ G G ++I +L +I L F FG I + +++ +
Sbjct: 87 SHRD--------PGLRKSGMGN---IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEH 135
Query: 152 TGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
S+G+GF+ F + + A+KA +NG L R + VG R +
Sbjct: 136 G--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQK 178
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 91/186 (48%), Gaps = 13/186 (6%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
I+ L + + L++ FS G ++ V+++ + + +G ++ F+ E A+ +
Sbjct: 193 IYVKNLHANVDEQRLQDLFSQFGNMQSVKVMR-DSNGQSRGFGFVNFEKHEEAQKAVDHM 251
Query: 78 NGQKLLGIPIIVQPTQAE-------KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
NG+++ G + V Q K R Q R G + LY+ +L +I ++
Sbjct: 252 NGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQG--VNLYVKNLDDSINDER 309
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
L+ +F +G I + ++M + + SKG+GF+ F S ++A KA ++NG + +P+ V
Sbjct: 310 LKEVFSTYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 367
Query: 191 VTDRNE 196
+ E
Sbjct: 368 AQRKEE 373
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G LH ++TE ML +F P G I +I++ D T RS GY +I F DA++A + +
Sbjct: 13 LYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 177 NGFELAGRPMKV 188
N + G+P+++
Sbjct: 73 NFEVIKGQPIRI 84
>gi|17157989|ref|NP_473384.1| RNA-binding protein Musashi homolog 2 isoform 1 [Mus musculus]
gi|51316506|sp|Q920Q6.1|MSI2H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|15982562|dbj|BAB69485.1| RNA-binding protein Musashi2-L [Mus musculus]
gi|37619701|tpg|DAA01567.1| TPA_exp: RNA-binding protein [Mus musculus]
gi|74146912|dbj|BAE41407.1| unnamed protein product [Mus musculus]
gi|74150444|dbj|BAE32260.1| unnamed protein product [Mus musculus]
Length = 346
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 9/172 (5%)
Query: 3 PAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY 62
P S + + D +F LS + L ++FS G++R+ ++ T+R +G +
Sbjct: 7 PGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGF 66
Query: 63 IEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSL 122
+ F DP SV +G +L + P A RA QP+ ++++G L
Sbjct: 67 VTFADPASVDKVLGQPHHELDSK--TIDPKVAFPRRA-------QPKMVTRTKKIFVGGL 117
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQE 174
N + ++ FE FGK+++ LM D T R +G+GF+TF + D +K E
Sbjct: 118 SANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
>gi|429863469|gb|ELA37920.1| nuclear and cytoplasmic polyadenylated rna-binding protein pub1
[Colletotrichum gloeosporioides Nara gc5]
Length = 479
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 18/189 (9%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E + R ++ L QR+ L + F + G V++V++I +K + ++E+ DP +
Sbjct: 82 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIP-DKNAKGYNYGFVEYDDPGAAE 140
Query: 73 LAM-GLNGQKLLGIPIIV----QPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
AM LNG+++ I V Q + K N +++G L +
Sbjct: 141 RAMQTLNGRRVHQSEIRVNWAYQSNTSSKEDTSNHF------------HIFVGDLSNEVN 188
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
+++L F FG + ++M D TGRS+GYGF+ F DA+KA ++G L R ++
Sbjct: 189 DEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIR 248
Query: 188 VGTVTDRNE 196
+ +
Sbjct: 249 CNWANQKGQ 257
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 92/233 (39%), Gaps = 39/233 (16%)
Query: 4 AYSDDLSPEERDART--IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIA 61
AY + S +E + IF LS + L + FS+ G V + R++ KT R +G
Sbjct: 161 AYQSNTSSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYG 220
Query: 62 YIEFKD-PESVPLAMGLNGQKL------------LGIPIIVQPTQAEKNRAGNTLP---- 104
++ F+D P++ ++G+ L G P I Q + T P
Sbjct: 221 FVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGLTPTTPFGHH 280
Query: 105 NLQPRGTGG-----------PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTG 153
G Y+G+L T + + +F+ FG + + D
Sbjct: 281 QFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVPLFQNFGYVVESRFQAD---- 336
Query: 154 RSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRN---ESVGGGPS 203
+G+ FI S + A A Q+NG+ + GRP+K D+ +S G PS
Sbjct: 337 --RGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWGKDKTPNPQSAGFDPS 387
>gi|50289655|ref|XP_447259.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526568|emb|CAG60192.1| unnamed protein product [Candida glabrata]
Length = 416
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 20/197 (10%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E R ++ L + I L+++F + G +++V++I K + A++E+
Sbjct: 54 ETSDRVLYVGNLDKSITEDLLKQYFQAGGPIQNVKIIEDMKNE-YVNYAFVEYIRSHDAN 112
Query: 73 LAM-GLNG----QKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
+A+ LNG K L I + QA +N L++G L+ ++
Sbjct: 113 VALQTLNGVQLENKTLKINWAFETQQAAEN--------------DDTFNLFVGDLNVDVD 158
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++ L G F F +M D TGRS+GYGF++F + ++A+KA + + G +L+GR ++
Sbjct: 159 DETLAGTFREFPTFIQAHVMWDMQTGRSRGYGFVSFSNQEEAQKAMDAMQGKDLSGRQIR 218
Query: 188 VGTVTDRNESVGGGPSN 204
+ T R ++G N
Sbjct: 219 INWATKRERNMGNNFGN 235
>gi|346979496|gb|EGY22948.1| gar2 [Verticillium dahliae VdLs.17]
Length = 485
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 19/189 (10%)
Query: 2 RPAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIA 61
+ A ++D+S + + T+F L+ + L + FS + R+IT + R +G
Sbjct: 214 KKARTEDMSEQ---SATLFVGSLAWAVNDDILYQAFSEFPNLTSARVITDREGGRSRGFG 270
Query: 62 YIEFKDPESVPLAM-GLNGQKLLGIPIIV-----------QPTQAEKNRAGNTLPNLQPR 109
Y++F D ES A+ NG +L G + + P +RA +L P
Sbjct: 271 YVDFSDAESAKAALEAKNGTELEGRNMNIDFSGKRPERSDNPGDRANDRAQRHGDSLSPE 330
Query: 110 GTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDA 169
L++G++ F + +D + F + +++L DP++G KG+G+++F S DDA
Sbjct: 331 SD----TLFVGNISFEMDQDTVHAFFATVAEPTSVRLPTDPESGNLKGFGYVSFSSIDDA 386
Query: 170 KKAQEQLNG 178
KKA +LNG
Sbjct: 387 KKALSELNG 395
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
L++GSL + + +D+L F F + + +++ D + GRS+G+G++ F A+ AK A E
Sbjct: 228 LFVGSLAWAVNDDILYQAFSEFPNLTSARVITDREGGRSRGFGYVDFSDAESAKAALEAK 287
Query: 177 NGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDL 217
NG EL GR M + R E P + D +R G L
Sbjct: 288 NGTELEGRNMNIDFSGKRPER-SDNPGDRANDRAQRHGDSL 327
>gi|342887855|gb|EGU87283.1| hypothetical protein FOXB_02159 [Fusarium oxysporum Fo5176]
Length = 505
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 15/172 (8%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-G 76
T+F LS I L E F + + + R++T T R +G Y++F D S A
Sbjct: 252 TLFAGSLSWSIDDNALYEAFKHIEGLANARVMTEKGTGRSRGFGYVDFNDAASCTKAYET 311
Query: 77 LNGQKLLGI----------PIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+ G +L G P P +RA + P L++G+L F++
Sbjct: 312 MQGVELEGRAINLDYANARPADANPQSRAADRAQRHGDTVSPESD----TLFVGNLPFDV 367
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
+D +R F ++ +++L DPD+G KG+G+++F+S +DAK+ E NG
Sbjct: 368 DQDTVREFFSEVAEVASVRLPTDPDSGNLKGFGYVSFNSVEDAKQVFEAKNG 419
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 111 TGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAK 170
T P L+ GSL ++I ++ L F+ + N ++M + TGRS+G+G++ F+ A
Sbjct: 247 TDEPTTLFAGSLSWSIDDNALYEAFKHIEGLANARVMTEKGTGRSRGFGYVDFNDAASCT 306
Query: 171 KAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAG 214
KA E + G EL GR + + R P + D +R G
Sbjct: 307 KAYETMQGVELEGRAINLDYANAR--PADANPQSRAADRAQRHG 348
>gi|340905400|gb|EGS17768.1| putative polyadenylated RNA protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 485
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 18/189 (9%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E + R ++ L R+ L + F + G V+ V++I +K R ++E+ DP +
Sbjct: 89 EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIP-DKNHRGYNYGFVEYDDPGAAE 147
Query: 73 LAM-GLNGQKLLGIPIIV----QPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
AM LNG+++ I V Q A K N +++G L +
Sbjct: 148 RAMQTLNGRRVHQNEIRVNWAYQSNNANKEDTSNHF------------HIFVGDLSNEVN 195
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
+++L F FG I ++M D TGRS+GYGF+ F DA+KA ++G L R ++
Sbjct: 196 DEVLWQAFSAFGSISEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIR 255
Query: 188 VGTVTDRNE 196
+ +
Sbjct: 256 CNWANQKGQ 264
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 40/208 (19%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
IF LS + L + FS+ G + + R++ KT R +G ++ F++ A+ +
Sbjct: 185 IFVGDLSNEVNDEVLWQAFSAFGSISEARVMWDMKTGRSRGYGFVAFRERADAEKALSSM 244
Query: 78 NGQKL------------LGIPIIVQPTQAEKNRAGNTLP------------------NLQ 107
+G+ L G P I Q ++ T P N
Sbjct: 245 DGEWLGSRAIRCNWANQKGQPSIHQQQAMQQMGMTPTTPYGHHHFPTHGIHSYDMVVNQT 304
Query: 108 PRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSAD 167
P Y+G+L T++ L +F+ FG + ++ D +G+ FI S +
Sbjct: 305 PAWQ---TTCYVGNLTPYTTQNDLVPLFQNFGYVVECRMQAD------RGFAFIKMDSHE 355
Query: 168 DAKKAQEQLNGFELAGRPMKVGTVTDRN 195
+A A QLNG+ + GRP+K DRN
Sbjct: 356 NAAMAICQLNGYMVNGRPLKCSWGKDRN 383
>gi|169768824|ref|XP_001818882.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus oryzae RIB40]
gi|238498168|ref|XP_002380319.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|83766740|dbj|BAE56880.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693593|gb|EED49938.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|391874569|gb|EIT83434.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 477
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 11/187 (5%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY--IEFKDPES 70
E + R ++ L QR+ L++ F + G V V++I KG Y +EF DP +
Sbjct: 86 EPNKRALYVGGLDQRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGA 145
Query: 71 VPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITED 129
AM LNG+++ I V A ++ + N T +++G L + ++
Sbjct: 146 AERAMQTLNGRRIHQSEIRV--NWAYQSNSTNK------EDTSNHFHIFVGDLSNEVNDE 197
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
+L+ F FG + ++M D TGRS+GYGF+ F DA KA ++G L R ++
Sbjct: 198 ILQQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRADADKALGSMDGEWLGSRAIRCN 257
Query: 190 TVTDRNE 196
+ +
Sbjct: 258 WANQKGQ 264
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 48/211 (22%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
IF LS + L++ FS+ G V + R++ KT R +G ++ F+D A+G +
Sbjct: 185 IFVGDLSNEVNDEILQQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRADADKALGSM 244
Query: 78 NGQKL------------LGIPIIVQ----------PTQAEKNRAGNT------------L 103
+G+ L G P I Q PT A + T
Sbjct: 245 DGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQT 304
Query: 104 PNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITF 163
P Q Y+G+L T++ L +F+ FG + +L D +G+ FI
Sbjct: 305 PQWQ-------TTCYVGNLTPYTTQNDLVPLFQNFGYVLETRLQAD------RGFAFIKM 351
Query: 164 HSADDAKKAQEQLNGFELAGRPMKVGTVTDR 194
S ++A A QLNG+ + GRP+K DR
Sbjct: 352 DSHENAAMAICQLNGYNVNGRPLKCSWGKDR 382
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGY--GFITFHSADDAKKAQE 174
LY+G L +TED+L+ IFE G + +++++ D + SKGY GF+ F A++A +
Sbjct: 92 LYVGGLDQRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQ 151
Query: 175 QLNGFELAGRPMKVGTVTDRNES 197
LNG + ++V N +
Sbjct: 152 TLNGRRIHQSEIRVNWAYQSNST 174
>gi|15982560|dbj|BAB69484.1| RNA-binding protein Musashi2-S [Mus musculus]
gi|26340376|dbj|BAC33851.1| unnamed protein product [Mus musculus]
gi|26340420|dbj|BAC33873.1| unnamed protein product [Mus musculus]
gi|85057100|gb|AAI11810.1| Msi2h protein [Mus musculus]
Length = 328
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 9/172 (5%)
Query: 3 PAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY 62
P S + + D +F LS + L ++FS G++R+ ++ T+R +G +
Sbjct: 7 PGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGF 66
Query: 63 IEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSL 122
+ F DP SV +G +L + P A RA QP+ ++++G L
Sbjct: 67 VTFADPASVDKVLGQPHHELDSK--TIDPKVAFPRRA-------QPKMVTRTKKIFVGGL 117
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQE 174
N + ++ FE FGK+++ LM D T R +G+GF+TF + D +K E
Sbjct: 118 SANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
>gi|410910966|ref|XP_003968961.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 635
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 21/208 (10%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
IF L + I + L + FS+ G + +++ C++ KG ++ F+ E+ A+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVV-CDENGS-KGYGFVHFETQEAAERAIEKM 158
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR----LYIGSLHFNITEDMLRG 133
NG L + V ++ K R G R +YI + ++ E+ LR
Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAEL---------GARAREFTNVYIKNFGDDMDEEKLRD 209
Query: 134 IFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTV-- 191
+F +G +I++M D D+G+S+G+GF++F +DA+KA +++NG E+ G+P+ VG
Sbjct: 210 VFNKYGNAMSIRVMTD-DSGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKPIYVGRAQK 268
Query: 192 -TDRNESVGGGPSNLDTDEMER-AGVDL 217
+R + + D M R GV+L
Sbjct: 269 KVERQAELKRKFEQMKQDRMTRYQGVNL 296
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 9/195 (4%)
Query: 8 DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKD 67
+L R+ ++ + L + F+ G +R++T + + + +G ++ F+
Sbjct: 182 ELGARAREFTNVYIKNFGDDMDEEKLRDVFNKYGNAMSIRVMT-DDSGKSRGFGFVSFER 240
Query: 68 PESVPLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR-----LYIGS 121
E A+ +NG+++ G PI V Q + R + R LY+ +
Sbjct: 241 HEDAQKAVDEMNGKEMNGKPIYVGRAQKKVERQAELKRKFEQMKQDRMTRYQGVNLYVKN 300
Query: 122 LHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFEL 181
L I ++ LR F PFG I + ++M++ GRSKG+GF+ F S ++A KA ++NG +
Sbjct: 301 LDDGIDDERLRKEFSPFGTITSAKVMLE--GGRSKGFGFVCFSSPEEATKAVTEMNGRIV 358
Query: 182 AGRPMKVGTVTDRNE 196
A +P+ V + E
Sbjct: 359 ATKPLYVALAQRKEE 373
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQP 91
L E FS G + +R+ TRR G AY+ F+ P A+ +N + G P+ +
Sbjct: 27 LYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPVRIMW 86
Query: 92 TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPD 151
+Q + P+L+ G G ++I +L +I L F FG I + +++ D +
Sbjct: 87 SQRD--------PSLRKSGVGN---IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN 135
Query: 152 TGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
SKGYGF+ F + + A++A E++NG L R + VG R E
Sbjct: 136 G--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKE 178
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 106 LQPRGTGGPM-RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFH 164
+ P PM LY+G LH ++TE ML F P G I +I++ D T RS GY ++ F
Sbjct: 1 MNPSAASYPMASLYVGDLHTDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQ 60
Query: 165 SADDAKKAQEQLNGFELAGRPMKV 188
DA++A + +N + GRP+++
Sbjct: 61 QPADAERALDTMNFDVIKGRPVRI 84
>gi|356519889|ref|XP_003528601.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 422
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 20/211 (9%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E FS G V +LI +K+
Sbjct: 39 IEPYPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSGTGPVEGCKLIRKDKSS--- 95
Query: 59 GIAYIEFKDPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
+I + D S LA + LNG+ L G PI V A R T G +
Sbjct: 96 -YGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQR----------EDTSGHYNI 144
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F + + ++M D TGRS+G+GF++F + DA+ + L
Sbjct: 145 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSSINDLT 204
Query: 178 GFELAGRPMKVGTVTDRNESVGGGPSNLDTD 208
G L R ++ T + GG ++D
Sbjct: 205 GKWLGSRQIRCNWAT---KGAGGNEEKQNSD 232
>gi|351714346|gb|EHB17265.1| Nucleolysin TIA-1 isoform p40 [Heterocephalus glaber]
Length = 386
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFHEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+NG+K++G + V P+ +K+ + +T+ + Q + +++G L I
Sbjct: 60 AAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQR--SQDHFHVFVGDLSPEI 117
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
T + ++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR +
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 187 KVGTVTDR 194
+ T +
Sbjct: 178 RTNWATRK 185
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPES 70
+D +F LS I T D++ F+ G++ D R++ T + KG ++ F D E+
Sbjct: 103 QDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAEN 162
Query: 71 VPLAMG---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLH 123
MG L G+++ +P + NT + + + +Y G +
Sbjct: 163 AIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPSNCTVYCGGVT 222
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+TE ++R F PFG+I +++ V PD KGY F+ F+S + A A +NG + G
Sbjct: 223 SGLTEQLMRQTFSPFGQI--MEIRVFPD----KGYSFVRFNSHESAAHAIVSVNGTTIEG 276
Query: 184 RPMK 187
+K
Sbjct: 277 HVVK 280
>gi|310798412|gb|EFQ33305.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 482
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 18/189 (9%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E + R ++ L QR+ L + F + G V++V++I +K + ++E+ DP +
Sbjct: 83 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIP-DKNAKGYNYGFVEYDDPGAAE 141
Query: 73 LAM-GLNGQKLLGIPIIV----QPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
AM LNG+++ I V Q + K N +++G L +
Sbjct: 142 RAMQTLNGRRVHQSEIRVNWAYQSNTSSKEDTSNHF------------HIFVGDLSNEVN 189
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
+++L F FG + ++M D TGRS+GYGF+ F DA+KA ++G L R ++
Sbjct: 190 DEILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIR 249
Query: 188 VGTVTDRNE 196
+ +
Sbjct: 250 CNWANQKGQ 258
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 93/236 (39%), Gaps = 36/236 (15%)
Query: 4 AYSDDLSPEERDART--IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIA 61
AY + S +E + IF LS + L + FS+ G V + R++ KT R +G
Sbjct: 162 AYQSNTSSKEDTSNHFHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRGYG 221
Query: 62 YIEFKD-PESVPLAMGLNGQKL------------LGIPIIVQPTQAEKNRAGNTLP---- 104
++ F+D P++ ++G+ L G P I Q + T P
Sbjct: 222 FVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGLTPTTPFGHH 281
Query: 105 NLQPRGTGG-----------PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTG 153
G Y+G+L T + + +F+ FG + + D
Sbjct: 282 QFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVPLFQNFGYVVESRFQAD---- 337
Query: 154 RSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDE 209
+G+ FI S + A A Q+NG+ + GRP+K D+ + GG + D +
Sbjct: 338 --RGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWGKDKTPNPQGGAAGFDPSQ 391
>gi|298710792|emb|CBJ32209.1| RNA-binding protein SiahBP [Ectocarpus siliculosus]
Length = 696
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 42/222 (18%)
Query: 17 RTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM- 75
R I+ L ++ D+ F++ G ++ V + + T R KG +IE+ D +S A+
Sbjct: 287 RRIYVGSLHYELKESDITSIFANFGALKLVDMSHDSSTGRHKGFCFIEYVDVKSADAALR 346
Query: 76 GLNGQKLLGIPIIV-QPTQAEKNRAGN----------TLPNLQP-------------RGT 111
+NG +L G I V +P + AG LP + +G+
Sbjct: 347 AMNGFELAGRAIKVGRPLNTDSGVAGGIEGMGLPAAMQLPGMAAFMAQHSTSAAGGAQGS 406
Query: 112 G----------------GPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDP-DTGR 154
G ++Y+G++ +IT +M++ +FEPFG + +++ DP + G
Sbjct: 407 GVAAEQLKAAMGMTTAPAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVQDPSNPGN 466
Query: 155 SKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
KG+GFI + A+ + ++ FELAGR ++V D+++
Sbjct: 467 HKGFGFIQYAQESVARTVIDTMSSFELAGRTLRVAWAQDQSK 508
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%)
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
P R+Y+GSLH+ + E + IF FG + + + D TGR KG+ FI + A A
Sbjct: 286 PRRIYVGSLHYELKESDITSIFANFGALKLVDMSHDSSTGRHKGFCFIEYVDVKSADAAL 345
Query: 174 EQLNGFELAGRPMKVGTVTDRNESVGGG 201
+NGFELAGR +KVG + + V GG
Sbjct: 346 RAMNGFELAGRAIKVGRPLNTDSGVAGG 373
>gi|408399266|gb|EKJ78389.1| hypothetical protein FPSE_01494 [Fusarium pseudograminearum CS3096]
Length = 498
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 7/168 (4%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-G 76
T+F LS I L E F + + + R++T T R +G Y++F D S A
Sbjct: 236 TLFAGSLSWSIDDNALYEAFKHIEGLANARVMTEKGTGRSRGFGYVDFNDAASCTKAYET 295
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM------RLYIGSLHFNITEDM 130
+NG +L G I + A A G L++G+L F++ +D
Sbjct: 296 MNGTELEGRAINLDYANARPAEANPAARAADRAQRHGDTVSPESDTLFVGNLPFDVDQDS 355
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
+R FE + +++L DPD+G KG+G+++F S ++AK+ E NG
Sbjct: 356 VRAFFEEVAAVASVRLPTDPDSGNLKGFGYVSFSSVEEAKQVFEAKNG 403
>gi|45361397|ref|NP_989276.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
gi|39795756|gb|AAH64164.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 386
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 94/186 (50%), Gaps = 5/186 (2%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
EE RT++ LS+ + + + FS +G + ++I T ++EF +
Sbjct: 2 EEDLPRTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIM--DTAGNDPYCFVEFFEHRHA 59
Query: 72 PLAMG-LNGQKLLGIPIIVQ--PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
++ +NG+K++G + V T + + + N+ + + +++G L IT
Sbjct: 60 AASLAAMNGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITT 119
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
D ++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A Q+ G L GR ++
Sbjct: 120 DDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRT 179
Query: 189 GTVTDR 194
T +
Sbjct: 180 NWATRK 185
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPES 70
+D +F LS I T D++ F+ G++ D R++ T + KG ++ F D E+
Sbjct: 103 QDHFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAEN 162
Query: 71 VPLAMG---LNGQKLLGIPIIVQP----TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLH 123
MG L G+++ +P + E N T + + + +Y G +
Sbjct: 163 AIAQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVT 222
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+TE ++R F PFG+I +++ V PD KGY F+ F S + A A +NG + G
Sbjct: 223 SGLTEQLMRQTFSPFGQI--MEVRVFPD----KGYSFVRFSSHESAAHAIVSVNGTTIEG 276
Query: 184 RPMK 187
+K
Sbjct: 277 HVVK 280
>gi|432097499|gb|ELK27684.1| Polyadenylate-binding protein 4-like protein [Myotis davidii]
Length = 370
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 9/178 (5%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGL 77
I+ + L+EFFS GK+ V+++T + + + KG ++ F E+ A+ +
Sbjct: 191 NIYIKNFGDEMDDEKLKEFFSHYGKIVSVKVMT-DSSGKSKGFGFVSFDTHEAAKRAVDI 249
Query: 78 -NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR-----LYIGSLHFNITEDML 131
NG+++ G + V Q + R + R R +Y+ +L I E+ L
Sbjct: 250 VNGREIFGQQVFVGRAQKKAERQAELKQLFEQRKQERSWRVRGTKIYVKNLDETIDEEKL 309
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
R F FG I +++M + GRS+G+G I F S ++A +A ++NG L +P+ +
Sbjct: 310 RKAFSSFGSIIRVKVM--QEEGRSRGFGLICFSSPEEAARAMAEMNGRLLGSKPVNIA 365
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
+F L + I + L E FS GK+ +++ ++ R G ++ F++ + A+
Sbjct: 99 NVFIKNLDKSIDNKTLYEHFSVFGKILSSKVMCDDQGSR--GYGFVHFQNQAAADRAIEE 156
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE 136
+NG L + V P + ++R L N T +YI + + ++ L+ F
Sbjct: 157 MNGVLLKDFRLFVGPFKNRRDREAE-LQNKASEFTN----IYIKNFGDEMDDEKLKEFFS 211
Query: 137 PFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
+GKI ++++M D +G+SKG+GF++F + + AK+A + +NG E+ G+ + VG + E
Sbjct: 212 HYGKIVSVKVMTDS-SGKSKGFGFVSFDTHEAAKRAVDIVNGREIFGQQVFVGRAQKKAE 270
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 37 FSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQPTQAE 95
FS+VG V +R+ TR G AY+ F A+ +N + G I + +Q +
Sbjct: 30 FSTVGTVLSIRICRDLVTRCSLGYAYVNFLHVADAQRALDTMNFDVIQGQSIRLMWSQRD 89
Query: 96 KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRS 155
L+ G G ++I +L +I L F FGKI + ++M D D G S
Sbjct: 90 --------AYLRKSGIGN---VFIKNLDKSIDNKTLYEHFSVFGKILSSKVMCD-DQG-S 136
Query: 156 KGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
+GYGF+ F + A +A E++NG L + VG +R +
Sbjct: 137 RGYGFVHFQNQAAADRAIEEMNGVLLKDFRLFVGPFKNRRD 177
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G L ++TE+ML F G + +I++ D T S GY ++ F DA++A + +
Sbjct: 12 LYVGDLPPDVTENMLFLKFSTVGTVLSIRICRDLVTRCSLGYAYVNFLHVADAQRALDTM 71
Query: 177 NGFELAGRPMKV 188
N + G+ +++
Sbjct: 72 NFDVIQGQSIRL 83
>gi|355724191|gb|AES08143.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Mustela putorius furo]
Length = 183
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 90/171 (52%), Gaps = 17/171 (9%)
Query: 30 TRDLEE-----FFSSVGKVRDVRLITCNKTRR-FKGIAYIEFKDPESVPLAMGLNGQKLL 83
+RD+ E FS +G + ++IT + + + + + E +D + AM NG+K+L
Sbjct: 6 SRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAM--NGRKIL 63
Query: 84 GIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDN 143
G + V N A T P+ Q + T +++G L IT + ++ F PFGKI +
Sbjct: 64 GKEVKV-------NWA--TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISD 114
Query: 144 IQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDR 194
+++ D TG+SKGYGF++F++ DA+ A + G L GR ++ T +
Sbjct: 115 ARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRK 165
>gi|348566571|ref|XP_003469075.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Cavia porcellus]
Length = 388
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFHEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+NG+K++G + V P+ +K+ + +T+ + Q + +++G L I
Sbjct: 60 AAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQ--RSQDHFHVFVGDLSPEI 117
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
T + ++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR +
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 187 KVGTVTDR 194
+ T +
Sbjct: 178 RTNWATRK 185
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 16/184 (8%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPES 70
+D +F LS I T D++ F+ G++ D R++ T + KG ++ F D E+
Sbjct: 103 QDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAEN 162
Query: 71 VPLAMG---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLH 123
MG L G+++ +P + NT + + + +Y G +
Sbjct: 163 AIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPSNCTVYCGGVT 222
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+TE ++R F PFG+I I++ D KGY F+ F+S + A A +NG + G
Sbjct: 223 SGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGTTIEG 276
Query: 184 RPMK 187
+K
Sbjct: 277 HVVK 280
>gi|255641747|gb|ACU21144.1| unknown [Glycine max]
Length = 397
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 17/195 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E FS+ G + +LI K+
Sbjct: 28 IEPILSGNLPPGFDSSSCRSVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKSS--- 84
Query: 59 GIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
++++ D S A+ LNG+ + G PI V A R T G +
Sbjct: 85 -YGFVDYFDRSSAAFAIVTLNGRNIFGQPIKVNWAYASSQR----------EDTSGHFNI 133
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F + + ++M D TGRS+G+GF++F + DA+ A L
Sbjct: 134 FVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 193
Query: 178 GFELAGRPMKVGTVT 192
G L R ++ T
Sbjct: 194 GKWLGSRQIRCNWAT 208
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 73/207 (35%), Gaps = 27/207 (13%)
Query: 4 AYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
AY+ + IF LS + L FS D R++ KT R +G ++
Sbjct: 118 AYASSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFV 177
Query: 64 EFKDPESVPLAMGLNGQKLLGI-----------------------PIIVQPTQAEKNRAG 100
F++ + A+ K LG I+V+
Sbjct: 178 SFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASASDEKQSSDSKIVVELINGSSEEGQ 237
Query: 101 NTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGF 160
T + P +Y+G+L +T L F N ++ D R KG+GF
Sbjct: 238 ETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSL----NAGIIEDVRVQRDKGFGF 293
Query: 161 ITFHSADDAKKAQEQLNGFELAGRPMK 187
+ + + +A A + N L G+P+K
Sbjct: 294 VRYSTHAEAALAIQMGNARILFGKPIK 320
>gi|348523081|ref|XP_003449052.1| PREDICTED: nucleolin-like isoform 2 [Oreochromis niloticus]
Length = 706
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 93/200 (46%), Gaps = 21/200 (10%)
Query: 10 SPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPE 69
S +E+DART+F L DL+E F ++R + + KGIAY+EFK
Sbjct: 368 SKKEKDARTLFVKNLPFSATADDLKEIFKDAVEIR----VPPGQNTSNKGIAYVEFKTEA 423
Query: 70 SVPLAMG-LNGQKLLGIPIIVQPTQAEKN----RAGNTLPNLQPRGTGGPMRLYIGSLHF 124
M G ++ G II+ T EK+ RA L T L + +L F
Sbjct: 424 DAERTMEETQGSEVQGRSIIIDYT-GEKSHMGARASGKLEIFSASKT-----LVVNNLSF 477
Query: 125 NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
N TE++L+ FE + + + GR KG+ F+ F S DDAK A E N E+ GR
Sbjct: 478 NATEEVLQSTFEK-----AVSIRIPQRDGRPKGFAFLEFESTDDAKDALENFNNTEIEGR 532
Query: 185 PMKVGTVTDRNESVG-GGPS 203
+++ R+ + G GP+
Sbjct: 533 SIRLEYSQSRDWNRGNSGPT 552
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 15/130 (11%)
Query: 56 RFKGIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGP 114
R KG A++EF+ + A+ N ++ G I ++ +Q+ R N RG GP
Sbjct: 502 RPKGFAFLEFESTDDAKDALENFNNTEIEGRSIRLEYSQS---RDWN-------RGNSGP 551
Query: 115 MR-LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
+ L++ L + TE+ L+ FE G + +++ D DTG SKG+GF+ F + DD K A+
Sbjct: 552 TKTLFVKGLSEDTTEETLKDAFE--GAV-AARIVTDRDTGSSKGFGFVDFSNEDDCKAAK 608
Query: 174 EQLNGFELAG 183
E + E+ G
Sbjct: 609 EAMEDGEIDG 618
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 20/156 (12%)
Query: 33 LEEFFSSVG-KVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQP 91
L +FFS G ++ DVRL K Y++F E + + LNG+K++G Q
Sbjct: 305 LRKFFSKNGLEITDVRLGGNKK------FGYVDFASEEDLQKGLELNGKKVMG-----QE 353
Query: 92 TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPD 151
+ EK R+ + + L++ +L F+ T D L+ IF+ D +++ V P
Sbjct: 354 VKLEKARSKEGSQDSKKEKDA--RTLFVKNLPFSATADDLKEIFK-----DAVEIRVPPG 406
Query: 152 TGRS-KGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
S KG ++ F + DA++ E+ G E+ GR +
Sbjct: 407 QNTSNKGIAYVEFKTEADAERTMEETQGSEVQGRSI 442
>gi|77695912|ref|NP_001029097.1| nucleolysin TIAR isoform 2 [Homo sapiens]
gi|73998714|ref|XP_852319.1| PREDICTED: nucleolysin TIAR isoform 2 [Canis lupus familiaris]
gi|114633030|ref|XP_001154768.1| PREDICTED: nucleolysin TIAR isoform 6 [Pan troglodytes]
gi|311271911|ref|XP_003133244.1| PREDICTED: nucleolysin TIAR isoform 2 [Sus scrofa]
gi|338716472|ref|XP_003363459.1| PREDICTED: nucleolysin TIAR [Equus caballus]
gi|390473251|ref|XP_003734574.1| PREDICTED: nucleolysin TIAR isoform 2 [Callithrix jacchus]
gi|395827973|ref|XP_003787162.1| PREDICTED: nucleolysin TIAR isoform 1 [Otolemur garnettii]
gi|397510639|ref|XP_003825700.1| PREDICTED: nucleolysin TIAR isoform 2 [Pan paniscus]
gi|402881652|ref|XP_003904380.1| PREDICTED: nucleolysin TIAR isoform 2 [Papio anubis]
gi|426253186|ref|XP_004020281.1| PREDICTED: nucleolysin TIAR isoform 2 [Ovis aries]
gi|426366374|ref|XP_004050233.1| PREDICTED: nucleolysin TIAR isoform 2 [Gorilla gorilla gorilla]
gi|158255404|dbj|BAF83673.1| unnamed protein product [Homo sapiens]
gi|380783709|gb|AFE63730.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|383408327|gb|AFH27377.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|384942768|gb|AFI34989.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|410218476|gb|JAA06457.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257384|gb|JAA16659.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296998|gb|JAA27099.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 392
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 30/204 (14%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLIT-------CNKTRRFKG 59
DD P RT++ LS+ + + + FS +G + ++IT N + F
Sbjct: 4 DDGQP-----RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSV 58
Query: 60 I--------AYIEFKDP-ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRG 110
+ ++EF + ++ +NG+K+LG + V N A T P+ Q +
Sbjct: 59 LQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKV-------NWA--TTPSSQKKD 109
Query: 111 TGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAK 170
T +++G L IT + ++ F PFGKI + +++ D TG+SKGYGF++F++ DA+
Sbjct: 110 TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAE 169
Query: 171 KAQEQLNGFELAGRPMKVGTVTDR 194
A + G L GR ++ T +
Sbjct: 170 NAIVHMGGQWLGGRQIRTNWATRK 193
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F LS I T D++ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175
Query: 76 G---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLHFNITE 128
G L G+++ +P + + NT ++ + + +Y G + +T+
Sbjct: 176 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 235
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
++R F PFG+I +++ V P+ KGY F+ F + + A A +NG + G +K
Sbjct: 236 QLMRQTFSPFGQI--MEIRVFPE----KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 288
>gi|26341844|dbj|BAC34584.1| unnamed protein product [Mus musculus]
Length = 278
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 9/172 (5%)
Query: 3 PAYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY 62
P S + + D +F LS + L ++FS G++R+ ++ T+R +G +
Sbjct: 3 PGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGF 62
Query: 63 IEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSL 122
+ F DP SV +G +L I P A RA QP+ ++++G L
Sbjct: 63 VTFADPASVDKVLGQPHHELDSKTI--DPKVAFPRRA-------QPKMVTRTKKIFVGGL 113
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQE 174
N + ++ FE FGK+++ LM D T R +G+GF+TF + D +K E
Sbjct: 114 SANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
>gi|187956894|gb|AAI58031.1| 1810053B01Rik protein [Mus musculus]
Length = 607
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 9/179 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
IF L I + L + FS+ G + +++ R G ++ F+ E+ A+ +
Sbjct: 101 IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSR--GFGFVHFETHEAAQKAINTM 158
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG L + V ++ + R L R G +Y+ +LH N+ E L+ +F
Sbjct: 159 NGMLLNDRKVFVGHFKSRQKREAE----LGARALGF-TNIYVKNLHANVDEQRLQDLFSQ 213
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
FG + ++++M D + G+S+G+GF+ F ++A+KA + +NG E++G+ + VG R E
Sbjct: 214 FGNMQSVKVMRDSN-GQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKRAE 271
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 91/186 (48%), Gaps = 13/186 (6%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
I+ L + + L++ FS G ++ V+++ + + +G ++ F+ E A+ +
Sbjct: 193 IYVKNLHANVDEQRLQDLFSQFGNMQSVKVMR-DSNGQSRGFGFVNFEKHEEAQKAVDHM 251
Query: 78 NGQKLLGIPIIVQPTQAE-------KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
NG+++ G + V Q K R Q R G + LY+ +L +I ++
Sbjct: 252 NGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQG--VNLYVKNLDDSINDER 309
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
L+ +F +G I + ++M + + SKG+GF+ F S ++A KA ++NG + +P+ V
Sbjct: 310 LKEVFSTYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 367
Query: 191 VTDRNE 196
+ E
Sbjct: 368 AQRKEE 373
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQP 91
L E FS +G + +R+ TRR G AYI F+ P A+ +N + + G PI +
Sbjct: 27 LYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEVIKGQPIRIMW 86
Query: 92 TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPD 151
+ + P L+ G G ++I +L +I L F FG I + +++ +
Sbjct: 87 SHRD--------PGLRKSGMGN---IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEH 135
Query: 152 TGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
S+G+GF+ F + + A+KA +NG L R + VG R +
Sbjct: 136 G--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQK 178
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G LH ++TE ML +F P G I +I++ D T RS GY +I F DA++A + +
Sbjct: 13 LYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 177 NGFELAGRPMKV 188
N + G+P+++
Sbjct: 73 NFEVIKGQPIRI 84
>gi|149036617|gb|EDL91235.1| rCG56007, isoform CRA_a [Rattus norvegicus]
Length = 386
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFHEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+NG+K++G + V P+ +K+ + +T+ + Q + +++G L I
Sbjct: 60 AAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQR--SQDHFHVFVGDLSPEI 117
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
T + ++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR +
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 187 KVGTVTDR 194
+ T +
Sbjct: 178 RTNWATRK 185
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 16/184 (8%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPES 70
+D +F LS I T D++ F+ G++ D R++ T + KG ++ F D E+
Sbjct: 103 QDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAEN 162
Query: 71 VPLAMG---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLH 123
MG L G+++ +P + NT + + + G +Y G +
Sbjct: 163 AIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPGNCTVYCGGVT 222
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+TE ++R F PFG+I I++ D KGY FI F S + A A +NG + G
Sbjct: 223 SGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFIRFSSHESAAHAIVSVNGTTIEG 276
Query: 184 RPMK 187
+K
Sbjct: 277 HVVK 280
>gi|166157896|ref|NP_001107551.1| polyadenylate-binding protein 1-like [Mus musculus]
gi|187960776|gb|ACD43645.1| embryonic poly(A)-binding protein [Mus musculus]
Length = 607
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 9/179 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-L 77
IF L I + L + FS+ G + +++ R G ++ F+ E+ A+ +
Sbjct: 101 IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSR--GFGFVHFETHEAAQKAINTM 158
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG L + V ++ + R L R G +Y+ +LH N+ E L+ +F
Sbjct: 159 NGMLLNDRKVFVGHFKSRQKREAE----LGARALGF-TNIYVKNLHANVDEQRLQDLFSQ 213
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
FG + ++++M D + G+S+G+GF+ F ++A+KA + +NG E++G+ + VG R E
Sbjct: 214 FGNMQSVKVMRDSN-GQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKRAE 271
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 91/186 (48%), Gaps = 13/186 (6%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
I+ L + + L++ FS G ++ V+++ + + +G ++ F+ E A+ +
Sbjct: 193 IYVKNLHANVDEQRLQDLFSQFGNMQSVKVMR-DSNGQSRGFGFVNFEKHEEAQKAVDHM 251
Query: 78 NGQKLLGIPIIVQPTQAE-------KNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
NG+++ G + V Q K R Q R G + LY+ +L +I ++
Sbjct: 252 NGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQG--VNLYVKNLDDSINDER 309
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
L+ +F +G I + ++M + + SKG+GF+ F S ++A KA ++NG + +P+ V
Sbjct: 310 LKEVFSTYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 367
Query: 191 VTDRNE 196
+ E
Sbjct: 368 AQRKEE 373
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQP 91
L E FS +G + +R+ TRR G AYI F+ P A+ +N + + G PI +
Sbjct: 27 LYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEVIKGQPIRIMW 86
Query: 92 TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPD 151
+ + P L+ G G ++I +L +I L F FG I + +++ +
Sbjct: 87 SHRD--------PGLRKSGMGN---IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEH 135
Query: 152 TGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
S+G+GF+ F + + A+KA +NG L R + VG R +
Sbjct: 136 G--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQK 178
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
LY+G LH ++TE ML +F P G I +I++ D T RS GY +I F DA++A + +
Sbjct: 13 LYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 177 NGFELAGRPMKV 188
N + G+P+++
Sbjct: 73 NFEVIKGQPIRI 84
>gi|89272716|emb|CAJ83609.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 389
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 94/186 (50%), Gaps = 5/186 (2%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
EE RT++ LS+ + + + FS +G + ++I T ++EF +
Sbjct: 2 EEDLPRTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIM--DTAGNDPYCFVEFFEHRHA 59
Query: 72 PLAMG-LNGQKLLGIPIIVQ--PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
++ +NG+K++G + V T + + + N+ + + +++G L IT
Sbjct: 60 AASLAAMNGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITT 119
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
D ++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A Q+ G L GR ++
Sbjct: 120 DDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRT 179
Query: 189 GTVTDR 194
T +
Sbjct: 180 NWATRK 185
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPES 70
+D +F LS I T D++ F+ G++ D R++ T + KG ++ F D E+
Sbjct: 103 QDHFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAEN 162
Query: 71 VPLAMG---LNGQKLLGIPIIVQP----TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLH 123
MG L G+++ +P + E N T + + + +Y G +
Sbjct: 163 AIAQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVT 222
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+TE ++R F PFG+I +++ V PD KGY F+ F S + A A +NG + G
Sbjct: 223 SGLTEQLMRQTFSPFGQI--MEVRVFPD----KGYSFVRFSSHESAAHAIVSVNGTTIEG 276
Query: 184 RPMK 187
+K
Sbjct: 277 HVVK 280
>gi|401842356|gb|EJT44580.1| NSR1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 393
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 92/176 (52%), Gaps = 7/176 (3%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
TIF +LS I L++ F +G V R+I T R +G Y++F++ A+
Sbjct: 142 TIFVGRLSWSIDDEWLKKEFEHIGGVISARVINERGTDRSRGYGYVDFENKSYAEKAIQE 201
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR----LYIGSLHFNITEDMLR 132
+ G+++ G PI + ++ AGN + + P L++G+L FN D +
Sbjct: 202 MQGKEIDGRPINCDLSTSKP--AGNNTNDRAKKFGDTPSEPSDTLFLGNLSFNADRDTIF 259
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
+F G++ ++++ P+T + KG+G++ F S +D+KKA E L G + RP+++
Sbjct: 260 ELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSSLEDSKKALESLQGEYIDNRPVRL 315
>gi|380026003|ref|XP_003696751.1| PREDICTED: uncharacterized protein LOC100864850 [Apis florea]
Length = 632
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 32/206 (15%)
Query: 8 DLSPEE--RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRL-----ITCNKTRRFKGI 60
D S EE D RTIF L + + + L + F GK+ +RL + N ++R I
Sbjct: 337 DTSLEEIKEDERTIFVGNLPKDVTKKKLRKLFKQFGKIDTIRLRGKIAKSVNVSKRVAAI 396
Query: 61 ------------AYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQP 108
AYI+F ESV ++ +NG + G + V + +N+
Sbjct: 397 KNELHPKLKSVYAYIKFVSKESVKESLSINGTEFEGNYLRVNASNKSENKFD-------- 448
Query: 109 RGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADD 168
+++G+LH+NI ++ + F+ G+I++++++ D TG KG+G++ F + D
Sbjct: 449 ----SKKSIFLGNLHYNIDDNTIIKHFKQCGEIESVRVVRDNKTGVGKGFGYVNFKNEDA 504
Query: 169 AKKAQEQLNGFELAGRPMKVGTVTDR 194
A E L+G ++ R ++V V D+
Sbjct: 505 VTLALE-LDGTTISNREVRVKPVIDQ 529
>gi|356547954|ref|XP_003542369.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 410
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 17/195 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E FS+ G + +LI K+
Sbjct: 28 IEPILSGNLPPGFDSSSCRSVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKS---- 83
Query: 59 GIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
++++ D S A+ LNG+ + G PI V A R T G +
Sbjct: 84 SYGFVDYFDRSSAAFAIVTLNGRNIFGQPIKVNWAYASSQR----------EDTSGHFNI 133
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F + + ++M D TGRS+G+GF++F + DA+ A L
Sbjct: 134 FVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 193
Query: 178 GFELAGRPMKVGTVT 192
G L R ++ T
Sbjct: 194 GKWLGSRQIRCNWAT 208
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 73/207 (35%), Gaps = 27/207 (13%)
Query: 4 AYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
AY+ + IF LS + L FS D R++ KT R +G ++
Sbjct: 118 AYASSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFV 177
Query: 64 EFKDPESVPLAMGLNGQKLLGI-----------------------PIIVQPTQAEKNRAG 100
F++ + A+ K LG I+V+
Sbjct: 178 SFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASASDEKQSSDSKIVVELINGSSEEGQ 237
Query: 101 NTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGF 160
T + P +Y+G+L +T L F N ++ D R KG+GF
Sbjct: 238 ETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSL----NAGIIEDVRVQRDKGFGF 293
Query: 161 ITFHSADDAKKAQEQLNGFELAGRPMK 187
+ + + +A A + N L G+P+K
Sbjct: 294 VRYSTHAEAALAIQMGNARILFGKPIK 320
>gi|356565743|ref|XP_003551097.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 411
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 17/195 (8%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E FS+ G + +LI K+
Sbjct: 28 IEPILSGNLPPGFDSSSCRSVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKS---- 83
Query: 59 GIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
++++ D S A+ LNG+ + G PI V A R T G +
Sbjct: 84 SYGFVDYFDRSSAAFAIVTLNGRNIFGQPIKVNWAYASSQR----------EDTSGHFNI 133
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F + + ++M D TGRS+G+GF++F + DA+ A L
Sbjct: 134 FVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 193
Query: 178 GFELAGRPMKVGTVT 192
G L R ++ T
Sbjct: 194 GKWLGSRQIRCNWAT 208
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 78/209 (37%), Gaps = 31/209 (14%)
Query: 4 AYSDDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYI 63
AY+ + IF LS + L FS D R++ KT R +G ++
Sbjct: 118 AYASSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFV 177
Query: 64 EFKDPESVPLAMG-LNGQKLLGIPI----------------------IVQPTQAEKNRAG 100
F++ + A+ L G+ L I +V+ T
Sbjct: 178 SFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASASDEKQTSDSRSVVELTNGSSEDGQ 237
Query: 101 NTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPF--GKIDNIQLMVDPDTGRSKGY 158
T + P +Y+G+L +T L F G I+++++ R KG+
Sbjct: 238 ETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLNAGTIEDVRVQ------RDKGF 291
Query: 159 GFITFHSADDAKKAQEQLNGFELAGRPMK 187
GF+ + + +A A + N L G+P+K
Sbjct: 292 GFVRYSTHAEAALAIQMGNARILFGKPIK 320
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%)
Query: 107 QPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSA 166
+P G L++G++ +NI ED LR FE FG+I +++ D +TGR+KG+G++ F +A
Sbjct: 209 EPAAEEGIKNLFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFSNA 268
Query: 167 DDAKKAQEQLNGFELAGRPMKVGTVTDR 194
DA KAQ++++ +EL GR + V T R
Sbjct: 269 ADAAKAQKEMHEYELDGRQLNVDFSTPR 296
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 10/194 (5%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E + +F +S I L F G++ R+IT +T R KG Y+EF +
Sbjct: 213 EEGIKNLFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFSNAADAA 272
Query: 73 LAMG------LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR-LYIGSLHFN 125
A L+G++L + +A+ + G N P L++G++ F
Sbjct: 273 KAQKEMHEYELDGRQLN---VDFSTPRAKPDANGGARANKYGDKRSPPSNTLFLGNVSFE 329
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
+ + ++ +F +G I + L D DTG KG+G++ F S +A A E LNG ++ GR
Sbjct: 330 CSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQEATAALEALNGQDIGGRA 389
Query: 186 MKVGTVTDRNESVG 199
+++ T R ++ G
Sbjct: 390 IRIDYATPREDNGG 403
>gi|344231201|gb|EGV63083.1| hypothetical protein CANTEDRAFT_106956 [Candida tenuis ATCC 10573]
Length = 231
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 13/193 (6%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-G 76
T+F +LS I L+ F G V R+I T + +G Y++F+ A+
Sbjct: 4 TLFVGRLSWNIDDDWLKREFEPSGGVISARVIMERATGKSRGYGYVDFESKADAEKALQD 63
Query: 77 LNGQKLLGIPI-----IVQPTQAEKNRAGNTLPNL--QPRGTGGPMRLYIGSLHFNITED 129
G+++ G PI +P KN ++ P T L+IG+L FN T D
Sbjct: 64 FQGKEIDGRPINLDLSTSKPQTPAKNDRAKKFGDVVSAPSDT-----LFIGNLSFNATRD 118
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
L F +G++ + ++ PDT + KG+G++ + S ++AK A E LNG + GRP ++
Sbjct: 119 KLFEAFGQYGEVISCRIPTHPDTQQPKGFGYVQYGSIEEAKAALEALNGEYIEGRPCRLD 178
Query: 190 TVTDRNESVGGGP 202
T R+ + P
Sbjct: 179 YSTPRDPASSQKP 191
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 54/84 (64%)
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
P L++G L +NI +D L+ FEP G + + +++++ TG+S+GYG++ F S DA+KA
Sbjct: 2 PATLFVGRLSWNIDDDWLKREFEPSGGVISARVIMERATGKSRGYGYVDFESKADAEKAL 61
Query: 174 EQLNGFELAGRPMKVGTVTDRNES 197
+ G E+ GRP+ + T + ++
Sbjct: 62 QDFQGKEIDGRPINLDLSTSKPQT 85
>gi|302904116|ref|XP_003049006.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729940|gb|EEU43293.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 474
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 10/185 (5%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E + R ++ L QR+ L + F + G V++V++I +K R ++E+ DP +
Sbjct: 80 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIP-DKNARGYNYGFVEYDDPGAAE 138
Query: 73 LAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDML 131
AM LNG+++ I V A ++ N T +++G L + +++L
Sbjct: 139 RAMQTLNGRRVHQSEIRV--NWAYQSNTSNK------EDTSNHFHIFVGDLSNEVNDEVL 190
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTV 191
F FG + ++M D TGRS+GYGF+ F DA+KA ++G L R ++
Sbjct: 191 LQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA 250
Query: 192 TDRNE 196
+ +
Sbjct: 251 NQKGQ 255
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
Y+G+L T + + +F+ FG + + D +G+ FI + ++A A Q+N
Sbjct: 303 YVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKMDTHENAAMAICQMN 356
Query: 178 GFELAGRPMKVGTVTDRNESVGGG 201
G+ + GRP+K D+ + GG
Sbjct: 357 GYNVNGRPLKCSWGKDKTPNAQGG 380
>gi|213514260|ref|NP_001133879.1| Nucleolysin TIAR [Salmo salar]
gi|209155676|gb|ACI34070.1| Nucleolysin TIAR [Salmo salar]
Length = 408
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 29/201 (14%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCN-KTRRFKG----------- 59
+E +T++ LS+ + + + F+ +G + ++IT +RR
Sbjct: 3 DESHPKTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQSS 62
Query: 60 ------IAYIEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGG 113
+ + E +D + AM NG+K+LG + V N A T P+ Q + T
Sbjct: 63 NDPYCFVEFFEHRDAAAALAAM--NGRKILGKEVKV-------NWA--TTPSSQKKDTSN 111
Query: 114 PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQ 173
+++G L IT + ++ F PFGKI + +++ D TG+SKGYGF++F++ DA+ A
Sbjct: 112 HFHVFVGDLSPEITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAI 171
Query: 174 EQLNGFELAGRPMKVGTVTDR 194
+ G L GR ++ T +
Sbjct: 172 VHMGGQWLGGRQIRTNWATRK 192
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 28/176 (15%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F LS I T D++ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 115 VFVGDLSPEITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHM 174
Query: 76 GLNGQKLLG-------------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSL 122
G GQ L G P VQ +++ R + + P+ +Y G +
Sbjct: 175 G--GQWLGGRQIRTNWATRKPPAPKNVQDNGSKQLRFEDVVNQSSPQNC----TVYCGGI 228
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
++E ++R F PFG+I +++ V P+ KGY FI F S + A A +NG
Sbjct: 229 QSGLSEHLMRQTFSPFGQI--MEIRVFPE----KGYSFIRFSSHESAAHAIVSVNG 278
>gi|16198525|gb|AAH15944.1| TIA1 protein [Homo sapiens]
gi|119620232|gb|EAW99826.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_d [Homo sapiens]
gi|119620233|gb|EAW99827.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_d [Homo sapiens]
Length = 214
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFHEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+NG+K++G + V P+ +K+ + +T+ + Q + +++G L I
Sbjct: 60 AAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQR--SQDHFHVFVGDLSPEI 117
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
T + ++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR +
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 187 KVGTVTDR 194
+ T +
Sbjct: 178 RTNWATRK 185
>gi|426402318|ref|YP_007021289.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|425858986|gb|AFY00022.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
Length = 104
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 50/73 (68%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
++Y+G+L FN+ +D L +F FG +D + ++ D +TGRSKG+ F+ + +A+ A E+
Sbjct: 4 KIYVGNLSFNVDQDQLNQVFAEFGTVDTVNVITDRETGRSKGFAFVEMSTETEARAAIEK 63
Query: 176 LNGFELAGRPMKV 188
LNG +LAGR M +
Sbjct: 64 LNGMDLAGRAMNI 76
>gi|6678349|ref|NP_033409.1| nucleolysin TIAR [Mus musculus]
gi|61557246|ref|NP_001013211.1| nucleolysin TIAR [Rattus norvegicus]
gi|2500589|sp|P70318.1|TIAR_MOUSE RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|1592563|gb|AAC52870.1| RNA binding protein TIAR [Mus musculus]
gi|12848609|dbj|BAB28019.1| unnamed protein product [Mus musculus]
gi|60552455|gb|AAH91409.1| Tia1 cytotoxic granule-associated RNA binding protein-like 1
[Rattus norvegicus]
gi|148685702|gb|EDL17649.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Mus musculus]
gi|149067621|gb|EDM17173.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_a [Rattus norvegicus]
Length = 392
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 30/204 (14%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLIT-------CNKTRRFKG 59
DD P RT++ LS+ + + + FS +G + ++IT N + F
Sbjct: 4 DDGQP-----RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSV 58
Query: 60 I--------AYIEFKDP-ESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRG 110
+ ++EF + ++ +NG+K+LG + V N A T P+ Q +
Sbjct: 59 LQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKV-------NWA--TTPSSQKKD 109
Query: 111 TGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAK 170
T +++G L IT + ++ F PFGKI + +++ D TG+SKGYGF++F++ DA+
Sbjct: 110 TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAE 169
Query: 171 KAQEQLNGFELAGRPMKVGTVTDR 194
A + G L GR ++ T +
Sbjct: 170 NAIVHMGGQWLGGRQIRTNWATRK 193
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK---DPESVPLAM 75
+F LS I T D++ F+ GK+ D R++ T + KG ++ F D E+ + M
Sbjct: 116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175
Query: 76 GLNGQKLLG-------------IPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSL 122
G GQ L G P Q T ++ R + + P+ +Y G +
Sbjct: 176 G--GQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNC----TVYCGGI 229
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
+T+ ++R F PFG+I +++ V P+ KGY F+ F + + A A +NG +
Sbjct: 230 ASGLTDQLMRQTFSPFGQI--MEIRVFPE----KGYSFVRFSTHESAAHAIVSVNGTTIE 283
Query: 183 GRPMK 187
G +K
Sbjct: 284 GHVVK 288
>gi|403335220|gb|EJY66784.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 307
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
E T++ L ++ + E F G + +V + T G ++EFK E
Sbjct: 15 ERNQEATLYVGNLDTKVNEELVWELFLQCGAIVNVHIPRDKVTNEHSGYGFVEFKTEEDA 74
Query: 72 PLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDM 130
A+ ++ KL G PI V +K Q G +++G+LH ++ E M
Sbjct: 75 DYAIKIMHMVKLFGKPIKVNKASQDKR--------TQEVGA----NVFVGNLHEDVDEKM 122
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
LR +F FG + + ++M DP+T SK YGF+++ + + + + + +NG L G+P+ V
Sbjct: 123 LRDVFSSFGIVLSTKIMRDPETQVSKRYGFVSYDNFESSDASIQAMNGQYLCGKPIDV 180
>gi|46806499|dbj|BAD17623.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806518|dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
Length = 374
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 13/184 (7%)
Query: 7 DDLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFK 66
D +P + IF ++ + F G + D ++ T+ +G ++ F
Sbjct: 56 DGRAPGGDSSGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFS 115
Query: 67 DPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPM--RLYIGSLHF 124
DP + K+L ++ E R T+P + GP ++++G L
Sbjct: 116 DPSVI--------DKVLEDEHVIDGRTVEVKR---TVPREEMSSKDGPKTRKIFVGGLPS 164
Query: 125 NITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGR 184
++TED LR F P+GKI Q+M+D TGRS+G+GF+TF S D ++ + +L G+
Sbjct: 165 SLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGK 224
Query: 185 PMKV 188
+++
Sbjct: 225 QVEI 228
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
++++G + + TE+ FE +G I + +M D T +G+GF+TF K E
Sbjct: 67 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 126
Query: 176 LNGFELAGRPMKVGTVTDRNES------------VGGGPSNLDTDEMERAGVDLGATGRL 223
+ + GR ++V R E VGG PS+L DE+ G
Sbjct: 127 EH--VIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGLPSSLTEDELREHFSPYGKIVEH 184
Query: 224 QLMFKLAEG 232
Q+M + G
Sbjct: 185 QIMLDHSTG 193
>gi|73969892|ref|XP_866571.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 9 [Canis lupus
familiaris]
gi|301758208|ref|XP_002914947.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Ailuropoda
melanoleuca]
gi|410954995|ref|XP_003984144.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Felis catus]
gi|431912606|gb|ELK14624.1| Nucleolysin TIA-1 isoform p40 [Pteropus alecto]
Length = 386
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFYEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+NG+K++G + V P+ +K+ + +T+ + Q + +++G L I
Sbjct: 60 AAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQR--SQDHFHVFVGDLSPEI 117
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
T + ++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR +
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 187 KVGTVTDR 194
+ T +
Sbjct: 178 RTNWATRK 185
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPES 70
+D +F LS I T D++ F+ G++ D R++ T + KG ++ F D E+
Sbjct: 103 QDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAEN 162
Query: 71 VPLAMG---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLH 123
MG L G+++ +P + NT + + + +Y G +
Sbjct: 163 AIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVT 222
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+TE ++R F PFG+I +++ V PD KGY F+ F+S + A A +NG + G
Sbjct: 223 SGLTEQLMRQTFSPFGQI--MEIRVFPD----KGYSFVRFNSHESAAHAIVSVNGTTIEG 276
Query: 184 RPMK 187
+K
Sbjct: 277 HVVK 280
>gi|380478106|emb|CCF43782.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 482
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 18/189 (9%)
Query: 13 ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVP 72
E + R ++ L QR+ L + F + G V++V++I +K + ++E+ DP +
Sbjct: 83 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIP-DKNAKGYNYGFVEYDDPGAAE 141
Query: 73 LAM-GLNGQKLLGIPIIV----QPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNIT 127
AM LNG+++ I V Q + K N +++G L +
Sbjct: 142 RAMQTLNGRRVHQSEIRVNWAYQSNTSSKEDTSNHF------------HIFVGDLSNEVN 189
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
+++L F FG + ++M D TGRS+GYGF+ F DA+KA ++G L R ++
Sbjct: 190 DEILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIR 249
Query: 188 VGTVTDRNE 196
+ +
Sbjct: 250 CNWANQKGQ 258
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 93/236 (39%), Gaps = 36/236 (15%)
Query: 4 AYSDDLSPEERDART--IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIA 61
AY + S +E + IF LS + L + FS+ G V + R++ KT R +G
Sbjct: 162 AYQSNTSSKEDTSNHFHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRGYG 221
Query: 62 YIEFKD-PESVPLAMGLNGQKL------------LGIPIIVQPTQAEKNRAGNTLP---- 104
++ F+D P++ ++G+ L G P I Q + T P
Sbjct: 222 FVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGLTPTTPFGHH 281
Query: 105 NLQPRGTGG-----------PMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTG 153
G Y+G+L T + + +F+ FG + + D
Sbjct: 282 QFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVPLFQNFGYVVESRFQAD---- 337
Query: 154 RSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVGGGPSNLDTDE 209
+G+ FI S + A A Q+NG+ + GRP+K D+ + GG + D +
Sbjct: 338 --RGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWGKDKTPNPQGGAAGFDPSQ 391
>gi|443895242|dbj|GAC72588.1| FOG: RRM domain [Pseudozyma antarctica T-34]
Length = 394
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 22/193 (11%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY--IEFKDPESVPLAM- 75
+ L R L + F+S+G ++ V+++ +R G+AY +EF D S A+
Sbjct: 29 VHVANLPSTTTERALRDMFASLGPIQSVKVVA---SRNSAGLAYGFVEFVDVSSAERAVR 85
Query: 76 GLNGQKLLGIPIIV-------QP---TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
L+G GIPI V P T E +R+ T N G L++G L +
Sbjct: 86 TLDGWLCFGIPIKVCWAKQSMHPEAMTVTEPDRSAPTHSN------AGNAHLFVGDLSPD 139
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRP 185
+ + ML F + ++++M D +TG+S+G+GF++F S DA+ + G L GR
Sbjct: 140 VDDSMLYSSFSRLPSLVDVRVMYDAETGKSRGFGFVSFRSKRDAETCIAAMQGQWLGGRQ 199
Query: 186 MKVGTVTDRNESV 198
++V +N +
Sbjct: 200 IRVNWANQKNSQL 212
>gi|125550587|gb|EAY96296.1| hypothetical protein OsI_18195 [Oryza sativa Indica Group]
Length = 548
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 12/223 (5%)
Query: 6 SDD--LSPE-ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY 62
SDD LS E E++A+ ++ + D+ FF + G + V +T ++ +F+GIA
Sbjct: 160 SDDPVLSEESEKNAKKVYVGGIPYYSSEDDIRSFFEACGSITSVDCMTFPESGKFRGIAI 219
Query: 63 IEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSL 122
+ FK + A+ L+G + G + +QP ++ + + + P+ G R+Y+G+L
Sbjct: 220 LTFKTDAAAQRALALDGADMGGFFLKIQPYKSVREKE-----DFAPKMIEGYNRVYVGNL 274
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
++ITED L+ F KI +I+ D +TG KGY + F A +L+ +
Sbjct: 275 AWDITEDDLKKFFSDC-KISSIRFGTDKETGDFKGYVHVDFSEGTSVAVAM-KLDQKVIK 332
Query: 183 GRPMKVGTVTDR--NESVGGGPSNLDTDEMERAGVDLGATGRL 223
GRP+++ + N+ + G + ++ R + G G +
Sbjct: 333 GRPVRIRCAVPKKDNQKLNGNANPDSSNNKIRICYECGTPGHI 375
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Query: 63 IEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSL 122
+E + P+S P + QK L Q + G+ P L ++Y+G +
Sbjct: 134 VEKRKPKSEPK---VKNQKQL---------QVADHAVGSDDPVLSEESEKNAKKVYVGGI 181
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
+ +ED +R FE G I ++ M P++G+ +G +TF + A++A L+G ++
Sbjct: 182 PYYSSEDDIRSFFEACGSITSVDCMTFPESGKFRGIAILTFKTDAAAQRAL-ALDGADMG 240
Query: 183 GRPMKV 188
G +K+
Sbjct: 241 GFFLKI 246
>gi|297832034|ref|XP_002883899.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
gi|297329739|gb|EFH60158.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
Length = 655
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 1 MRPAYSD-DLSPEERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKG 59
+R YS D S A IF L + I + L + FS G + + + + + + KG
Sbjct: 111 VRVMYSHRDPSVRRSGAGNIFIKNLDKSIDHKALHDTFSVFGNIISCK-VAVDSSGQSKG 169
Query: 60 IAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQP--TQAEKNRAGNTLPNLQPRGTGGPMR 116
+++++ ES AMG LNG L + V P + E++ GN
Sbjct: 170 YGFVQYETEESAQKAMGQLNGMLLNDKQVYVGPFLRRQERDSTGNKTIFTN--------- 220
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
+Y+ +L + T+D L+ IF FGKI + +M D + G+ KG+GF+ F +ADDA KA E L
Sbjct: 221 VYVKNLAESTTDDDLKNIFGEFGKITSAVVMKDGE-GKPKGFGFVNFENADDAAKAVESL 279
Query: 177 NGFELAGRPMKVGTVTDRNE 196
NG + VG ++E
Sbjct: 280 NGKTFDDKEWFVGRAQKKSE 299
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGL 77
+++ L + L + FS +G+V VR+ TRR G Y+ F P+ A+
Sbjct: 41 SLYVGDLDPNVTDSQLFDAFSQMGQVVSVRVCRDLATRRSLGYGYVNFTSPQDAARAI-- 98
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
Q+L IP+ +P + + P+++ G G ++I +L +I L F
Sbjct: 99 --QELNYIPLNGKPVRVMYSHRD---PSVRRSGAG---NIFIKNLDKSIDHKALHDTFSV 150
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
FG I + ++ VD +G+SKGYGF+ + + + A+KA QLNG L + + VG R E
Sbjct: 151 FGNIISCKVAVD-SSGQSKGYGFVQYETEESAQKAMGQLNGMLLNDKQVYVGPFLRRQE 208
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 95/201 (47%), Gaps = 16/201 (7%)
Query: 9 LSPEERDA---RTIF----CMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIA 61
L +ERD+ +TIF L++ DL+ F GK+ ++ + + KG
Sbjct: 204 LRRQERDSTGNKTIFTNVYVKNLAESTTDDDLKNIFGEFGKITSA-VVMKDGEGKPKGFG 262
Query: 62 YIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR---- 116
++ F++ + A+ LNG+ V Q + R + +
Sbjct: 263 FVNFENADDAAKAVESLNGKTFDDKEWFVGRAQKKSEREMELKVQYEQSLKEAADKFQSS 322
Query: 117 -LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
LY+ +L +++++ L+ +F P+G + + ++M DP+ G S+G GF+ F + ++A KA +
Sbjct: 323 NLYVKNLDDSVSDEKLKELFTPYGTVTSCKVMRDPN-GMSRGSGFVAFSTPEEATKAMSE 381
Query: 176 LNGFELAGRPMKVGTVTDRNE 196
++G + +P+ V V R E
Sbjct: 382 MSGKMIENKPLYV-AVAQRKE 401
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 113 GPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKA 172
G LY+G L N+T+ L F G++ ++++ D T RS GYG++ F S DA +A
Sbjct: 38 GTTSLYVGDLDPNVTDSQLFDAFSQMGQVVSVRVCRDLATRRSLGYGYVNFTSPQDAARA 97
Query: 173 QEQLNGFELAGRPMKVGTVTDRNESV 198
++LN L G+P++V + R+ SV
Sbjct: 98 IQELNYIPLNGKPVRV-MYSHRDPSV 122
>gi|357129961|ref|XP_003566627.1| PREDICTED: uncharacterized protein LOC100837982 [Brachypodium
distachyon]
Length = 620
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 4/168 (2%)
Query: 32 DLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQP 91
D+ FF G + + +T ++ +F+GIA + FK + A+ L+G + G + VQP
Sbjct: 207 DIRSFFEGCGSITALDCMTFPESGKFRGIAILTFKTDAAAQRALALDGADMGGFFLKVQP 266
Query: 92 TQA--EKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVD 149
+A EK ++ + + P+ G R+Y+G+L ++ITE LR F KI +I+ D
Sbjct: 267 YKANREKVKSNHEKEDFAPKMIEGYNRIYVGNLAWDITEVDLRKFFSDC-KISSIRFGTD 325
Query: 150 PDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNES 197
+TG KG+ + F A +L+ + GRP+++ R ES
Sbjct: 326 KETGDFKGFAHVDFSDGTSLAVAM-KLDQNVIKGRPVRIRCAVPRKES 372
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 116 RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQ 175
++Y+G + + +ED +R FE G I + M P++G+ +G +TF + A++A
Sbjct: 193 KVYVGGIPYYSSEDDIRSFFEGCGSITALDCMTFPESGKFRGIAILTFKTDAAAQRAL-A 251
Query: 176 LNGFELAGRPMKVGTVTDRNESV 198
L+G ++ G +KV E V
Sbjct: 252 LDGADMGGFFLKVQPYKANREKV 274
>gi|254572962|ref|XP_002493590.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|238033389|emb|CAY71411.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|328354581|emb|CCA40978.1| Nuclear localization sequence-binding protein [Komagataella
pastoris CBS 7435]
Length = 362
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 13/190 (6%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
T+F +LS I L++ F +G V R++ T R +G Y++F + S A+
Sbjct: 127 TLFVGRLSWSIDDEWLKKEFEHIGGVVGARVMMERATGRSRGYGYVDFDNKASAEKALEE 186
Query: 77 LNGQKLLGIPIIVQ--------PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITE 128
+ G+++ G PI V P +RA P L++G+L F
Sbjct: 187 MQGKEIDGRPINVDMSNSKPAAPAARNNDRASQYGDKRSPPSD----TLFLGNLSFQADR 242
Query: 129 DMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
D L +F G + ++++ P+T + KG+G++ F S D+A A E LNG + RP+++
Sbjct: 243 DTLFELFSKHGNVTSVRIPTHPETEQPKGFGYVQFSSVDEATGALEALNGEYVDNRPIRL 302
Query: 189 GTVTDRNESV 198
T R+ S
Sbjct: 303 DYSTPRDPSA 312
>gi|115461723|ref|NP_001054461.1| Os05g0114500 [Oryza sativa Japonica Group]
gi|45680441|gb|AAS75242.1| hypothetical protein [Oryza sativa Japonica Group]
gi|52353509|gb|AAU44075.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113578012|dbj|BAF16375.1| Os05g0114500 [Oryza sativa Japonica Group]
gi|222629967|gb|EEE62099.1| hypothetical protein OsJ_16883 [Oryza sativa Japonica Group]
Length = 548
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 12/223 (5%)
Query: 6 SDD--LSPE-ERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAY 62
SDD LS E E++A+ ++ + D+ FF + G + V +T ++ +F+GIA
Sbjct: 160 SDDPVLSEESEKNAKKVYVGGIPYYSSEDDIRSFFEACGSITSVDCMTFPESGKFRGIAI 219
Query: 63 IEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSL 122
+ FK + A+ L+G + G + +QP ++ + + + P+ G R+Y+G+L
Sbjct: 220 LTFKTDAAAQRALALDGADMGGFFLKIQPYKSVREKE-----DFAPKMIEGYNRVYVGNL 274
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
++ITED L+ F KI +I+ D +TG KGY + F A +L+ +
Sbjct: 275 AWDITEDDLKKFFSDC-KISSIRFGTDKETGDFKGYVHVDFSEGTSVAVAM-KLDQKVIK 332
Query: 183 GRPMKVGTVTDR--NESVGGGPSNLDTDEMERAGVDLGATGRL 223
GRP+++ + N+ + G + ++ R + G G +
Sbjct: 333 GRPVRIRCAVPKKDNQKLNGNANPDSSNNKIRICYECGTPGHI 375
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Query: 63 IEFKDPESVPLAMGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSL 122
+E + P+S P + QK L Q + G+ P L ++Y+G +
Sbjct: 134 VEKRKPKSEPK---VKNQKQL---------QVADHAVGSDDPVLSEESEKNAKKVYVGGI 181
Query: 123 HFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA 182
+ +ED +R FE G I ++ M P++G+ +G +TF + A++A L+G ++
Sbjct: 182 PYYSSEDDIRSFFEACGSITSVDCMTFPESGKFRGIAILTFKTDAAAQRAL-ALDGADMG 240
Query: 183 GRPMKV 188
G +K+
Sbjct: 241 GFFLKI 246
>gi|356505441|ref|XP_003521499.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 314
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 15 DARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLA 74
DA ++ L I L E F G V V ++ T R +G A++ + E A
Sbjct: 103 DAGRLYVGNLPYSITNSALAELFGEAGTVASVEIMYDRVTDRSRGFAFVTMGNVEDAKEA 162
Query: 75 MGL-NGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITED 129
+ + +G ++ G + V P E+ G+ + N P ++Y G+L + +T
Sbjct: 163 IRMFDGSQVGGRTVKVNFPEVPKGGERLVMGSKIRNSYRGFVDSPHKIYAGNLGWGLTSQ 222
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
LR F + + +++ + D+GRS+G+GF++F +A+ A+ A + +NG E+ GRP+++
Sbjct: 223 GLREAFAEQPGVLSAKVIYERDSGRSRGFGFVSFETAESAQAALDIMNGVEVQGRPLRLN 282
Query: 190 TVTDRNES 197
R S
Sbjct: 283 LAEARAPS 290
>gi|49618989|gb|AAT68079.1| nucleolin [Danio rerio]
Length = 667
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 23/181 (12%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+ERDART+F L I DL E F + D+R+ N T +GI YIEFK
Sbjct: 334 KERDARTLFVKNLPYSITQDDLREIFD---QAVDIRVPMGN-TGTSRGIVYIEFKTEAIA 389
Query: 72 PLAMG-LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR---LYIGSLHFNIT 127
A+ G + G IIV T +K+R G G G P L + +L F+ +
Sbjct: 390 EKALEEAQGSDVQGRSIIVDFT-GDKSRQG---------GRGAPSASKVLVVNNLAFSAS 439
Query: 128 EDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMK 187
ED L+ +FE + + + + GR KGY F+ F + +D+K+A E N ++ GR ++
Sbjct: 440 EDSLQSVFEKA-----VSIRIPQNNGRPKGYAFVEFENVEDSKEALENCNNTDIEGRSIR 494
Query: 188 V 188
+
Sbjct: 495 L 495
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 33/180 (18%)
Query: 33 LEEFFSSVG-KVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQP 91
+ +FFS G +++DVRL T++F Y++F E + A+ LNG+KLLG P+ +
Sbjct: 269 ISKFFSKEGLEIQDVRL---GGTKKF---GYVDFASEEELQKALELNGKKLLGQPVKLDK 322
Query: 92 TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFE-------PFGKIDNI 144
++++ N+ N + R L++ +L ++IT+D LR IF+ P G
Sbjct: 323 ARSKE----NSQENKKERDA---RTLFVKNLPYSITQDDLREIFDQAVDIRVPMG----- 370
Query: 145 QLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVG-GGPS 203
+TG S+G +I F + A+KA E+ G ++ GR + V D++ G G PS
Sbjct: 371 ------NTGTSRGIVYIEFKTEAIAEKALEEAQGSDVQGRSIIVDFTGDKSRQGGRGAPS 424
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 56 RFKGIAYIEFKDPESVPLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGP 114
R KG A++EF++ E A+ N + G I ++ +Q ++ R G N P T
Sbjct: 461 RPKGYAFVEFENVEDSKEALENCNNTDIEGRSIRLEYSQNDRERGGGGRGNSGPTKT--- 517
Query: 115 MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQE 174
L++ L + T+ L+ F+ G I ++ D DTG SKG+GF+ F + D K A+E
Sbjct: 518 --LFVKGLSDDTTDQTLKDSFD--GAI-AARIATDRDTGSSKGFGFVDFDNEQDCKAAKE 572
Query: 175 QLNGFELAG 183
++ E+ G
Sbjct: 573 AMDDGEIDG 581
>gi|255556984|ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223541388|gb|EEF42939.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 280
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 53/76 (69%)
Query: 115 MRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQE 174
++L++G+L FN+ L G+FE G ++ ++++ D TGRS+G+GF+T S D+ + A +
Sbjct: 92 LKLFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVEAAAQ 151
Query: 175 QLNGFELAGRPMKVGT 190
Q NG+EL GR ++V +
Sbjct: 152 QFNGYELEGRALRVNS 167
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 6/182 (3%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV-PLAMGL 77
+F L + + L F S G V V +I T R +G ++ + V A
Sbjct: 94 LFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVEAAAQQF 153
Query: 78 NGQKLLGIPIIVQ---PTQAEKN--RAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLR 132
NG +L G + V P Q E + R+ + RLY+G+L +++ L
Sbjct: 154 NGYELEGRALRVNSGPPPQRESSFSRSPRFGGGGGGGESLEGNRLYVGNLSWSVDNLALE 213
Query: 133 GIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVT 192
F GK+ + +++ D ++GRS+G+GF+T+ SA++ + A + LNG EL GR ++V
Sbjct: 214 SFFSEQGKVVDAKVVYDRESGRSRGFGFVTYSSAEEVENAIDSLNGAELDGRAIRVSVAE 273
Query: 193 DR 194
R
Sbjct: 274 AR 275
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
E + ++ LS + LE FFS GKV D +++ ++ R +G ++ + E V
Sbjct: 191 ESLEGNRLYVGNLSWSVDNLALESFFSEQGKVVDAKVVYDRESGRSRGFGFVTYSSAEEV 250
Query: 72 PLAM-GLNGQKLLGIPIIVQPTQAEKNR 98
A+ LNG +L G I V +A R
Sbjct: 251 ENAIDSLNGAELDGRAIRVSVAEARPRR 278
>gi|354544201|emb|CCE40924.1| hypothetical protein CPAR2_109610 [Candida parapsilosis]
Length = 475
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 10/178 (5%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
T+F +LS I L+ F + V R+I T + +G Y++F + A+
Sbjct: 236 TVFAGRLSWNIDDDWLKREFEHLEGVIGARVIMERATGKSRGYGYVDFTSKAAAEKAIEE 295
Query: 77 LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR------LYIGSLHFNITEDM 130
+ G+++ G PI + + R T PN G + L+IG+L FN D
Sbjct: 296 MQGREIDGRPINLDLSTG---RPHATKPNNDRAKQFGDQQSPPSDTLFIGNLSFNANRDK 352
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
L IF +G + + +L PDT + KG+G++ F S D+AK A E LNG L GRP ++
Sbjct: 353 LFEIFGEYGNVISCRLPTHPDTQQPKGFGYVQFGSVDEAKAALEALNGEYLEGRPCRL 410
>gi|344283907|ref|XP_003413712.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Loxodonta
africana]
Length = 386
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDP-ES 70
E+ +T++ LS+ + + + FS +G ++ ++I T ++EF + +
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--DTAGNDPYCFVEFYEHRHA 59
Query: 71 VPLAMGLNGQKLLGIPIIVQ----PTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNI 126
+NG+K++G + V P+ +K+ + +T+ + Q + +++G L I
Sbjct: 60 AAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQR--SQDHFHVFVGDLSPEI 117
Query: 127 TEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPM 186
T + ++ F PFG+I + +++ D TG+SKGYGF++F + DA+ A +Q+ G L GR +
Sbjct: 118 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
Query: 187 KVGTVTDR 194
+ T +
Sbjct: 178 RTNWATRK 185
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 14 RDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEF---KDPES 70
+D +F LS I T D++ F+ G++ D R++ T + KG ++ F D E+
Sbjct: 103 QDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAEN 162
Query: 71 VPLAMG---LNGQKLLGIPIIVQPTQAEKNRAGNT----LPNLQPRGTGGPMRLYIGSLH 123
MG L G+++ +P + NT + + + +Y G +
Sbjct: 163 AIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVT 222
Query: 124 FNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAG 183
+TE ++R F PFG+I +++ V PD KGY F+ F+S + A A +NG + G
Sbjct: 223 SGLTEQLMRQTFSPFGQI--MEIRVFPD----KGYSFVRFNSHESAAHAIVSVNGTTIEG 276
Query: 184 RPMK 187
+K
Sbjct: 277 HVVK 280
>gi|301615885|ref|XP_002937390.1| PREDICTED: nucleolin [Xenopus (Silurana) tropicalis]
Length = 705
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 17/179 (9%)
Query: 12 EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESV 71
+ERD+RT+F + +L+E F + +D+R+ T K KGIAY+EF +
Sbjct: 379 KERDSRTLFVKNIPYSTTAEELQEIFEN---AKDIRIPT-GKDGANKGIAYVEFSNETEA 434
Query: 72 PLAM-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR-LYIGSLHFNITED 129
A+ G ++ G I V T + +G+ R GG + L + +L ++ TED
Sbjct: 435 TKALEEKQGAEIEGRSIFVDFTGEKSQNSGSR------RVQGGDSKVLVVNNLSYSATED 488
Query: 130 MLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKV 188
LR +FE + + + GR+KG+ FI F S +DAK+A + N E+ GR +++
Sbjct: 489 SLREVFE-----KATSIRIPQNQGRAKGFAFIEFSSVEDAKEAMDSCNNTEIEGRSIRL 542
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 33 LEEFFSSVG-KVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGIPIIVQP 91
L EFFS V+DVR+ K Y++F E V A+ L+G+K+LG + ++
Sbjct: 312 LREFFSKKNLTVQDVRIGNSKK------FGYVDFSSEEEVEQALKLSGKKILGSEVKIEK 365
Query: 92 TQA-EKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDP 150
A +KN+ N + + L++ ++ ++ T + L+ IFE +I++
Sbjct: 366 AMAFDKNK------NAENKKERDSRTLFVKNIPYSTTAEELQEIFE---NAKDIRIPTGK 416
Query: 151 DTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNESVG 199
D G +KG ++ F + +A KA E+ G E+ GR + V +++++ G
Sbjct: 417 D-GANKGIAYVEFSNETEATKALEEKQGAEIEGRSIFVDFTGEKSQNSG 464
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Query: 15 DARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLA 74
D++ + LS L E F +R I N+ R KG A+IEF E A
Sbjct: 472 DSKVLVVNNLSYSATEDSLREVFEKATSIR----IPQNQGRA-KGFAFIEFSSVEDAKEA 526
Query: 75 M-GLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRG 133
M N ++ G I ++ +Q + G + L++ L + TE+ L+
Sbjct: 527 MDSCNNTEIEGRSIRLEFSQGSGPQGGRGG-------SAQSKTLFVRGLSEDTTEETLKE 579
Query: 134 IFEPFGKIDNIQLMVDPDTGRSKGYGFITFHS 165
F+ G + N +++ D DTG SKG+GF+ F +
Sbjct: 580 AFD--GSV-NARIVTDRDTGASKGFGFVDFST 608
>gi|242025596|ref|XP_002433210.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
gi|212518751|gb|EEB20472.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
Length = 637
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 90/166 (54%), Gaps = 14/166 (8%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLL-GIPIIVQ 90
L E F G++ ++++ + + KG ++ F+DPE+ A+ LNG++++ G P+ V
Sbjct: 208 LREMFEKYGRITSHKVMSKDDGKS-KGFGFVAFEDPEAAEKAVASLNGKEIVEGKPLFVG 266
Query: 91 PTQAEKNRAGNTLPNLQ-------PRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDN 143
Q + R + R G + LY+ ++ NI ++ LR F PFG I +
Sbjct: 267 RAQKKAERQQELKRKFEQLKMERLSRYQG--VNLYVKNIDDNIDDERLRKEFTPFGTITS 324
Query: 144 IQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVG 189
++M++ GRSKG+GF+ F SA++A KA ++NG + +P+ V
Sbjct: 325 AKVMLE--DGRSKGFGFVCFSSAEEATKAVTEMNGRIVGSKPLYVA 368
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 13/165 (7%)
Query: 33 LEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG-LNGQKLLGIPIIVQP 91
L E FSS G V +R+ T+R G AY+ F+ P A+ +N L G PI +
Sbjct: 27 LFEKFSSAGPVLSIRVCRDMITKRSLGYAYVNFQQPADAERALDTMNYDPLKGKPIRIMW 86
Query: 92 TQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPD 151
+Q + P+L+ G G ++I +L +I + F FG I + ++ D +
Sbjct: 87 SQRD--------PSLRKSGVGN---VFIKNLDKSIDNKAMYDTFSTFGNILSCKVAQD-E 134
Query: 152 TGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
+G SKGYGF+ F + + A K+ +++NG L G+ + VG R E
Sbjct: 135 SGTSKGYGFVHFETEEAANKSIDKVNGMLLNGKRVFVGKFIPRKE 179
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 13/205 (6%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
+F L + I + + + FS+ G + + + +++ KG ++ F+ E+ ++ +
Sbjct: 101 VFIKNLDKSIDNKAMYDTFSTFGNILSCK-VAQDESGTSKGYGFVHFETEEAANKSIDKV 159
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG L G + V K R L R T +Y+ + + ++D+LR +FE
Sbjct: 160 NGMLLNGKRVFVGKFIPRKERE-KELGEKAKRFTN----VYVKNFGEDFSDDLLREMFEK 214
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELA-GRPMKVGTVTDRNE 196
+G+I + ++M D G+SKG+GF+ F + A+KA LNG E+ G+P+ VG + E
Sbjct: 215 YGRITSHKVM-SKDDGKSKGFGFVAFEDPEAAEKAVASLNGKEIVEGKPLFVGRAQKKAE 273
Query: 197 SVGGGPSNLDTDEMER----AGVDL 217
+ +MER GV+L
Sbjct: 274 RQQELKRKFEQLKMERLSRYQGVNL 298
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 106 LQPRGTGGPM-RLYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFH 164
+ P G PM LY+G LH ++TE ML F G + +I++ D T RS GY ++ F
Sbjct: 1 MNPGGPNYPMASLYVGDLHSDVTEAMLFEKFSSAGPVLSIRVCRDMITKRSLGYAYVNFQ 60
Query: 165 SADDAKKAQEQLNGFELAGRPMKV 188
DA++A + +N L G+P+++
Sbjct: 61 QPADAERALDTMNYDPLKGKPIRI 84
>gi|255556766|ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223541279|gb|EEF42830.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 632
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-GL 77
++ LS+ I L+E F G V ++ T + KG +++F+ +S A+ L
Sbjct: 103 VYVKNLSESIDNVGLQELFGEFGTVLSCKVATFEDGKS-KGHGFVQFESEDSANSAIEKL 161
Query: 78 NGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDMLRGIFEP 137
NG + I V + +R LP+ + T LY+ +L ITE++L+ F
Sbjct: 162 NGSIVGDKQIYVGKFVKKSDR---VLPSPDAKYTN----LYVKNLDPGITEELLQEKFSE 214
Query: 138 FGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTVTDRNE 196
FGKI ++ + D + G S+G+GF+ F + DDA+ A E++NG EL + + VG R E
Sbjct: 215 FGKIVSVAIARD-ECGSSRGFGFVNFENPDDARWAMERMNGTELGSKVLYVGRAQKRAE 272
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 12/186 (6%)
Query: 19 IFCMQLSQRIRTRDLEEFFSSVGKVRDVRLI--TCNKTRRFKGIAYIEFKDPESVPLAMG 76
++ L I L+E FS GK+ V + C +R G ++ F++P+ AM
Sbjct: 194 LYVKNLDPGITEELLQEKFSEFGKIVSVAIARDECGSSR---GFGFVNFENPDDARWAME 250
Query: 77 -LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMR-----LYIGSLHFNITEDM 130
+NG +L + V Q R + + + +Y+ ++ ++T++
Sbjct: 251 RMNGTELGSKVLYVGRAQKRAEREQILRRQFEEKRKEQITKFKGSNVYVKNIDDDVTDEE 310
Query: 131 LRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGT 190
LR F G I + +LM D D GRSKG+GF+ F S+++A KA +G+ +P+ V
Sbjct: 311 LREHFSQCGTITSAKLMKD-DKGRSKGFGFVCFSSSEEASKAVNTFHGYMFHRKPLYVAI 369
Query: 191 VTDRNE 196
+ E
Sbjct: 370 AQRKEE 375
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 23/187 (12%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAMG- 76
+++ +L + L + FS + VR+ + T R Y+ F PE A+
Sbjct: 14 SLYVGELHCDVSDGQLVDAFSEFNTLASVRVCRDSSTGRSLCYGYVNFISPEDAIRAIET 73
Query: 77 -----LNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFNITEDML 131
LNG KL+ + + A +N GN +Y+ +L +I L
Sbjct: 74 KNHTPLNG-KLMRVMWSHRDPDARRNGIGN---------------VYVKNLSESIDNVGL 117
Query: 132 RGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNGFELAGRPMKVGTV 191
+ +F FG + + ++ D G+SKG+GF+ F S D A A E+LNG + + + VG
Sbjct: 118 QELFGEFGTVLSCKVATFED-GKSKGHGFVQFESEDSANSAIEKLNGSIVGDKQIYVGKF 176
Query: 192 TDRNESV 198
+++ V
Sbjct: 177 VKKSDRV 183
>gi|302414816|ref|XP_003005240.1| gar2 [Verticillium albo-atrum VaMs.102]
gi|261356309|gb|EEY18737.1| gar2 [Verticillium albo-atrum VaMs.102]
Length = 437
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 16/173 (9%)
Query: 18 TIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDPESVPLAM-G 76
T+F L+ + L + FS + R+IT + R +G Y++F D ES A+
Sbjct: 178 TLFVGSLAWAVNDDILYQAFSEFPNLTSARVITDREGGRSRGFGYVDFSDAESAKAALEA 237
Query: 77 LNGQKLLGIPIIV-----------QPTQAEKNRAGNTLPNLQPRGTGGPMRLYIGSLHFN 125
NG +L G + + P +RA +L P L++G++ F
Sbjct: 238 KNGTELEGRNMNIDFSGKRPERSDNPGDRANDRAQRHGDSLSPESD----TLFVGNISFE 293
Query: 126 ITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLNG 178
+ +D + F + +++L DP++G KG+G+++F S DDAKKA +LNG
Sbjct: 294 MDQDTVHAFFATVAEPTSVRLPTDPESGNLKGFGYVSFSSIDDAKKALSELNG 346
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 117 LYIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQL 176
L++GSL + + +D+L F F + + +++ D + GRS+G+G++ F A+ AK A E
Sbjct: 179 LFVGSLAWAVNDDILYQAFSEFPNLTSARVITDREGGRSRGFGYVDFSDAESAKAALEAK 238
Query: 177 NGFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGVDL 217
NG EL GR M + R E P + D +R G L
Sbjct: 239 NGTELEGRNMNIDFSGKRPER-SDNPGDRANDRAQRHGDSL 278
>gi|224073594|ref|XP_002304117.1| predicted protein [Populus trichocarpa]
gi|222841549|gb|EEE79096.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 23/218 (10%)
Query: 1 MRPAYSDDLSP--EERDARTIFCMQLSQRIRTRDLEEFFSSVGKVRDVRLITCNKTRRFK 58
+ P S +L P + R+++ + ++ L+E F+S G V +LI K+
Sbjct: 35 IEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKLIRKEKSS--- 91
Query: 59 GIAYIEFKDPESVPLA-MGLNGQKLLGIPIIVQPTQAEKNRAGNTLPNLQPRGTGGPMRL 117
+I + D + LA + LNG+ L G PI V A R T G +
Sbjct: 92 -YGFIHYFDRRAAALAILSLNGRHLFGQPIKVNWAYASGQR----------EDTSGHFNI 140
Query: 118 YIGSLHFNITEDMLRGIFEPFGKIDNIQLMVDPDTGRSKGYGFITFHSADDAKKAQEQLN 177
++G L +T+ L F + + ++M D TGRS+G+GF++F + DA+ A L
Sbjct: 141 FVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 200
Query: 178 GFELAGRPMKVGTVTDRNESVGGGPSNLDTDEMERAGV 215
G L R ++ N + G SN D + V
Sbjct: 201 GKWLGSRQIRC------NWASKGAGSNEDKQSSDSKSV 232
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,876,364,801
Number of Sequences: 23463169
Number of extensions: 255796863
Number of successful extensions: 672516
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 18562
Number of HSP's successfully gapped in prelim test: 7851
Number of HSP's that attempted gapping in prelim test: 607363
Number of HSP's gapped (non-prelim): 52984
length of query: 370
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 226
effective length of database: 8,980,499,031
effective search space: 2029592781006
effective search space used: 2029592781006
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)