Query psy2985
Match_columns 76
No_of_seqs 107 out of 268
Neff 4.4
Searched_HMMs 46136
Date Fri Aug 16 22:34:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2985.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2985hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03242 diacylglycerol o-acyl 100.0 1.2E-39 2.6E-44 254.7 7.5 73 4-76 248-320 (410)
2 PLN02401 diacylglycerol o-acyl 100.0 3.5E-39 7.5E-44 254.2 7.5 73 4-76 273-345 (446)
3 KOG0380|consensus 100.0 9.4E-39 2E-43 255.3 7.0 72 5-76 345-416 (523)
4 COG5056 ARE1 Acyl-CoA choleste 100.0 1E-29 2.2E-34 201.6 6.1 68 9-76 353-420 (512)
5 PF03062 MBOAT: MBOAT, membran 99.4 9.5E-13 2.1E-17 94.5 5.7 56 21-76 163-228 (322)
6 PLN02332 membrane bound O-acyl 93.4 0.039 8.4E-07 43.9 1.4 21 56-76 309-329 (465)
7 COG1696 DltB Predicted membran 68.0 4 8.7E-05 32.9 2.1 38 38-76 252-290 (425)
8 PF10445 DUF2456: Protein of u 66.5 20 0.00044 23.6 4.9 55 2-56 15-70 (94)
9 KOG4312|consensus 62.5 3 6.6E-05 33.8 0.5 20 57-76 284-303 (449)
10 PF15168 TRIQK: Triple QxxK/R 53.5 23 0.00049 22.9 3.3 20 14-33 52-71 (79)
11 PF13813 MBOAT_2: Membrane bou 50.9 6.1 0.00013 24.1 0.4 24 49-72 4-28 (83)
12 PF06369 Anemone_cytotox: Sea 32.1 13 0.00028 27.1 -0.3 11 46-56 107-117 (176)
13 PF00520 Ion_trans: Ion transp 29.1 48 0.0011 21.0 2.0 32 23-56 4-35 (200)
14 PF05408 Peptidase_C28: Foot-a 27.1 39 0.00085 25.0 1.4 24 32-55 42-65 (193)
15 PF09351 DUF1993: Domain of un 23.5 1.3E+02 0.0028 21.0 3.5 23 10-32 127-149 (162)
16 PF07045 DUF1330: Protein of u 21.0 34 0.00074 19.9 0.1 21 41-61 43-63 (65)
17 PF02206 WSN: Domain of unknow 20.4 77 0.0017 18.6 1.6 16 35-50 34-49 (69)
No 1
>PLN03242 diacylglycerol o-acyltransferase; Provisional
Probab=100.00 E-value=1.2e-39 Score=254.66 Aligned_cols=73 Identities=48% Similarity=1.110 Sum_probs=70.9
Q ss_pred cHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhhcCCCHHHHHHhcChhhhhhhcC
Q psy2985 4 SVRWLAQLTSDLEIPNHLIWLIFFYLFFHSLLNLTGEVLHFADRNFYADWWNADNTDTFWRNWNMPIHQWAVR 76 (76)
Q Consensus 4 ~~~~~~e~~lkl~~p~~~~~ll~Fy~~fh~~lN~~AEl~~F~DR~FY~dWWNa~~~~~f~r~WN~pVH~wl~R 76 (76)
+...++||++|+++|++++||++||++|||+||++|||||||||+||+|||||+|++||||+||+|||+||+|
T Consensus 248 ~~~~~~er~lkL~~P~~~~~Ll~Fy~ifh~~LN~~AEltrFgDR~FY~DWWNs~s~~eywR~WN~PVH~fl~R 320 (410)
T PLN03242 248 NYLYAIERVLKLSIPNLYVWLLMFYCFFHLWLNIVAELLCFGDREFYKDWWNASEVSEYWRLWNMPVHYWLVR 320 (410)
T ss_pred chHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccCcHHHHHHHcchHHHHHHHH
Confidence 4668899999999999999999999999999999999999999999999999999999999999999999987
No 2
>PLN02401 diacylglycerol o-acyltransferase
Probab=100.00 E-value=3.5e-39 Score=254.15 Aligned_cols=73 Identities=47% Similarity=1.133 Sum_probs=70.9
Q ss_pred cHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhhcCCCHHHHHHhcChhhhhhhcC
Q psy2985 4 SVRWLAQLTSDLEIPNHLIWLIFFYLFFHSLLNLTGEVLHFADRNFYADWWNADNTDTFWRNWNMPIHQWAVR 76 (76)
Q Consensus 4 ~~~~~~e~~lkl~~p~~~~~ll~Fy~~fh~~lN~~AEl~~F~DR~FY~dWWNa~~~~~f~r~WN~pVH~wl~R 76 (76)
+...++||++|+++|++++||++||++|||+||++|||||||||+||+|||||+|++||||+||+|||+||+|
T Consensus 273 ~~~~~~er~lkLs~P~~~~wLl~Fy~ifh~~LN~~AEltrFgDR~FY~DWWNs~s~~eywR~WN~PVH~fL~R 345 (446)
T PLN02401 273 NLLYAIERVLKLSVPNLYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNAKTVEEYWRMWNMPVHKWMVR 345 (446)
T ss_pred hhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccCcHHHHHHHcchHHHHHHHH
Confidence 4677899999999999999999999999999999999999999999999999999999999999999999987
No 3
>KOG0380|consensus
Probab=100.00 E-value=9.4e-39 Score=255.35 Aligned_cols=72 Identities=51% Similarity=1.123 Sum_probs=70.9
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhhcCCCHHHHHHhcChhhhhhhcC
Q psy2985 5 VRWLAQLTSDLEIPNHLIWLIFFYLFFHSLLNLTGEVLHFADRNFYADWWNADNTDTFWRNWNMPIHQWAVR 76 (76)
Q Consensus 5 ~~~~~e~~lkl~~p~~~~~ll~Fy~~fh~~lN~~AEl~~F~DR~FY~dWWNa~~~~~f~r~WN~pVH~wl~R 76 (76)
.+.++|+++|+++|++++||++||++|||+||++|||||||||+||+|||||+|++||||+||+|||+||+|
T Consensus 345 ~~~~~~~ll~l~iP~il~~Ll~FY~ifh~~LNa~AEl~rFaDR~FY~DWWNs~s~~~f~R~WN~PVH~wl~R 416 (523)
T KOG0380|consen 345 ASRLIERLLKLMIPGILIWLLFFYLIFHCWLNAVAELTRFADREFYGDWWNSVSWDEFWRTWNVPVHKWLYR 416 (523)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHhhhccCcHHHHHHHcCcHHHHHHHH
Confidence 788999999999999999999999999999999999999999999999999999999999999999999987
No 4
>COG5056 ARE1 Acyl-CoA cholesterol acyltransferase [Lipid metabolism]
Probab=99.96 E-value=1e-29 Score=201.57 Aligned_cols=68 Identities=43% Similarity=0.824 Sum_probs=64.6
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhhcCCCHHHHHHhcChhhhhhhcC
Q psy2985 9 AQLTSDLEIPNHLIWLIFFYLFFHSLLNLTGEVLHFADRNFYADWWNADNTDTFWRNWNMPIHQWAVR 76 (76)
Q Consensus 9 ~e~~lkl~~p~~~~~ll~Fy~~fh~~lN~~AEl~~F~DR~FY~dWWNa~~~~~f~r~WN~pVH~wl~R 76 (76)
.-.++..++|.++++++.||.+|+|+||++|||||||||.||+|||||.|++||+|.||+|||.||+|
T Consensus 353 ~~~l~~~mipfivlyll~FY~Ifd~iLN~vAEiTrFaDr~FYgdWWNcvsw~eFsr~WNkPVh~fLlR 420 (512)
T COG5056 353 WINLLFDMIPFIVLYLLFFYLIFDCILNAVAEITRFADRYFYGDWWNCVSWDEFSRIWNKPVHKFLLR 420 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhccccHHHHHHHhCcHHHHHHHH
Confidence 34567788999999999999999999999999999999999999999999999999999999999987
No 5
>PF03062 MBOAT: MBOAT, membrane-bound O-acyltransferase family; InterPro: IPR004299 The MBOAT (membrane bound O-acyl transferase) family of membrane proteins contains a variety of acyltransferase enzymes. A conserved histidine has been suggested to be the active site residue [].
Probab=99.37 E-value=9.5e-13 Score=94.46 Aligned_cols=56 Identities=34% Similarity=0.813 Sum_probs=44.9
Q ss_pred HHHHHHHHHHH---HHHHHHHHHHhccC-------chhhhhhhhcCCCHHHHHHhcChhhhhhhcC
Q psy2985 21 LIWLIFFYLFF---HSLLNLTGEVLHFA-------DRNFYADWWNADNTDTFWRNWNMPIHQWAVR 76 (76)
Q Consensus 21 ~~~ll~Fy~~f---h~~lN~~AEl~~F~-------DR~FY~dWWNa~~~~~f~r~WN~pVH~wl~R 76 (76)
......+|..+ |++.++.|+...+| |++|++|||||+++++|||+||+|||+||+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~a~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~r~WN~~v~~wL~~ 228 (322)
T PF03062_consen 163 FGFAYKYYLYFKFSGYWLFAEAAAILFGIGYDGFAPRNFYRCWENSTSFSDFWRSWNISVHKWLKR 228 (322)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHcCCccccccCCcCchhhhhhcCcHHHHHHHhhhHHHHHHHH
Confidence 33344466666 45677777776554 8999999999999999999999999999986
No 6
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=93.43 E-value=0.039 Score=43.85 Aligned_cols=21 Identities=19% Similarity=0.444 Sum_probs=19.0
Q ss_pred CCCHHHHHHhcChhhhhhhcC
Q psy2985 56 ADNTDTFWRNWNMPIHQWAVR 76 (76)
Q Consensus 56 a~~~~~f~r~WN~pVH~wl~R 76 (76)
|+|+.++||.||+++|.|+++
T Consensus 309 ~~s~~~~~~~WNi~~~~Wl~~ 329 (465)
T PLN02332 309 AKSAVQIPLVWNIQVSTWLRH 329 (465)
T ss_pred cCCHHHHHHHccchHHHHHHH
Confidence 668999999999999999964
No 7
>COG1696 DltB Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane]
Probab=68.03 E-value=4 Score=32.93 Aligned_cols=38 Identities=21% Similarity=0.573 Sum_probs=31.2
Q ss_pred HHHHhccCch-hhhhhhhcCCCHHHHHHhcChhhhhhhcC
Q psy2985 38 TGEVLHFADR-NFYADWWNADNTDTFWRNWNMPIHQWAVR 76 (76)
Q Consensus 38 ~AEl~~F~DR-~FY~dWWNa~~~~~f~r~WN~pVH~wl~R 76 (76)
+|-+.++.-. +|..+-=+ .|+.||||.|.+..-+|++|
T Consensus 252 ~a~l~Gi~~PeNFn~P~~a-~si~~FWrRWHmSLS~W~rd 290 (425)
T COG1696 252 LALLFGIRLPENFNRPYLA-KSIKDFWRRWHMSLSTWFRD 290 (425)
T ss_pred HHHHcCCCCchhcccHHHH-hhHHHHHHHHHhhHHHHhhh
Confidence 5666666655 78888877 89999999999999999865
No 8
>PF10445 DUF2456: Protein of unknown function (DUF2456); InterPro: IPR018852 This entry represents a family of uncharacterised proteins.
Probab=66.55 E-value=20 Score=23.56 Aligned_cols=55 Identities=9% Similarity=0.315 Sum_probs=44.9
Q ss_pred cccHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hccCchhhhhhhhcC
Q psy2985 2 KFSVRWLAQLTSDLEIPNHLIWLIFFYLFFHSLLNLTGEV-LHFADRNFYADWWNA 56 (76)
Q Consensus 2 ~~~~~~~~e~~lkl~~p~~~~~ll~Fy~~fh~~lN~~AEl-~~F~DR~FY~dWWNa 56 (76)
|.++++++|+++.-++=++++-.+.|..++=--..++|-+ ++.++...|++-|..
T Consensus 15 ~~~~~~~~~~lv~~~~rgli~av~~f~~~WP~tigIla~iG~~~~~D~~f~~~w~P 70 (94)
T PF10445_consen 15 KSKFKNFLEWLVQQAIRGLILAVLIFLLLWPITIGILAAIGTRGGGDYYFNNYWAP 70 (94)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccccCCCCccccCCcccH
Confidence 5788999999999999999999999998888888888777 667777777775543
No 9
>KOG4312|consensus
Probab=62.50 E-value=3 Score=33.84 Aligned_cols=20 Identities=30% Similarity=0.652 Sum_probs=17.0
Q ss_pred CCHHHHHHhcChhhhhhhcC
Q psy2985 57 DNTDTFWRNWNMPIHQWAVR 76 (76)
Q Consensus 57 ~~~~~f~r~WN~pVH~wl~R 76 (76)
.|..|=-+.||+|.|.||.|
T Consensus 284 RS~~~~V~sWN~Pmh~wL~~ 303 (449)
T KOG4312|consen 284 RSTLQTVSSWNKPMHTWLHE 303 (449)
T ss_pred HHHHHHHHHcCCcHHHHHHH
Confidence 36678889999999999974
No 10
>PF15168 TRIQK: Triple QxxK/R motif-containing protein family
Probab=53.52 E-value=23 Score=22.87 Aligned_cols=20 Identities=35% Similarity=0.610 Sum_probs=16.9
Q ss_pred hhhHHHHHHHHHHHHHHHHH
Q psy2985 14 DLEIPNHLIWLIFFYLFFHS 33 (76)
Q Consensus 14 kl~~p~~~~~ll~Fy~~fh~ 33 (76)
.+.+++++..|+.+|++|-.
T Consensus 52 ~l~l~ail~lL~a~Ya~fyl 71 (79)
T PF15168_consen 52 ALVLAAILVLLLAFYAFFYL 71 (79)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999843
No 11
>PF13813 MBOAT_2: Membrane bound O-acyl transferase family
Probab=50.90 E-value=6.1 Score=24.08 Aligned_cols=24 Identities=21% Similarity=0.731 Sum_probs=18.7
Q ss_pred hhhhhhcCCCHHHHHHh-cChhhhh
Q psy2985 49 FYADWWNADNTDTFWRN-WNMPIHQ 72 (76)
Q Consensus 49 FY~dWWNa~~~~~f~r~-WN~pVH~ 72 (76)
.+++.+.|+|+.+||-+ ||..+.+
T Consensus 4 lFg~~~~a~Slr~fWg~~WHq~~r~ 28 (83)
T PF13813_consen 4 LFGSPWEAYSLRRFWGRRWHQLFRR 28 (83)
T ss_pred ccCCHHHHCcHHHHHhhHHHHHHHH
Confidence 46788999999999975 8765544
No 12
>PF06369 Anemone_cytotox: Sea anemone cytotoxic protein; InterPro: IPR009104 Sea anemones are a rich source of lethal pore-forming peptides and proteins, known collectively as cytolysins or actinoporins. There are several different groups of cytolysins based on their structure and function []. This entry represents the most numerous group, the 20kDa highly basic peptides. These cytolysins form cation-selective pores in sphingomyelin-containing membranes. Examples include equinatoxins (from Actinia equina), sticholysins (from Stichodactyla helianthus), magnificalysins (from Heteractis magnifica), and tenebrosins (from Actinia tenebrosa), which exhibit pore-forming, haemolytic, cytotoxic, and heart stimulatory activities. Cytolysins adopt a stable soluble structure, which undergoes a conformational change when brought in contact with a membrane, leading to an active, membrane-bound form that inserts spontaneously into the membrane. They often oligomerise on the membrane surface, before puncturing the lipid bilayers, causing the cell to lyse. The 20kDa sea anemone cytolysins require a phosphocholine lipid headgroup for binding, however sphingomyelin is required for the toxin to promote membrane permeability []. The crystal structures of equinotoxin II [] and sticholysin II [] both revealed a compact beta-sandwich consisting of ten strands in two sheets flanked on each side by two short alpha-helices, which is a similar topology to osmotin. It is believed that the beta sandwich structure attaches to the membrane, while a three-turn alpha helix lying on the surface of the beta sheet may be involved in membrane pore formation, possibly by the penetration of the membrane by the helix.; GO: 0015267 channel activity, 0006812 cation transport, 0046931 pore complex assembly, 0052331 hemolysis in other organism involved in symbiotic interaction, 0046930 pore complex; PDB: 2KS4_A 1KD6_A 1IAZ_A 1TZQ_A 3LIM_F 1O71_B 2L2B_A 1GWY_B 1O72_A 2L38_A ....
Probab=32.06 E-value=13 Score=27.11 Aligned_cols=11 Identities=45% Similarity=1.452 Sum_probs=7.8
Q ss_pred chhhhhhhhcC
Q psy2985 46 DRNFYADWWNA 56 (76)
Q Consensus 46 DR~FY~dWWNa 56 (76)
|.++|+.|||-
T Consensus 107 dynly~nw~~V 117 (176)
T PF06369_consen 107 DYNLYSNWWAV 117 (176)
T ss_dssp TTTTS--EEEE
T ss_pred ccccccceeEE
Confidence 88999999984
No 13
>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins. The proteins have 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some Na channels proteins the domain is repeated four times, whereas in others (e.g. K channels) the protein forms a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not included in the Pfam family due to it lacking the first four helices. ; GO: 0005216 ion channel activity, 0006811 ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3VMX_B 1QG9_A 1UJL_A 2LE7_A 2LCM_A 3A2A_A 3RW0_A 4EKW_A 3RVY_B 3RVZ_B ....
Probab=29.08 E-value=48 Score=21.01 Aligned_cols=32 Identities=16% Similarity=0.488 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCchhhhhhhhcC
Q psy2985 23 WLIFFYLFFHSLLNLTGEVLHFADRNFYADWWNA 56 (76)
Q Consensus 23 ~ll~Fy~~fh~~lN~~AEl~~F~DR~FY~dWWNa 56 (76)
++.......+..++..++=.. ++++.+++||-
T Consensus 4 ~~~~~~f~~e~~l~~~~~~~~--~~~y~~~~~~~ 35 (200)
T PF00520_consen 4 IIFDVIFILEIVLRFFALGFK--RRRYFRSWWNW 35 (200)
T ss_dssp HHHHHHHHHHHHHHHHTCCCG---GCCCCSHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccH--HHHHhcChhhc
Confidence 445556677888877766544 78999999994
No 14
>PF05408 Peptidase_C28: Foot-and-mouth virus L-proteinase; InterPro: IPR008739 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to MEROPS peptidase family C28 (clan CA).The protein fold of the peptidase unit for members of this family resembles that of papain. The leader peptidase of Foot-and-mouth disease virus cleaves itself from the growing polyprotein and also cleaves the host translation initiation factor 4GI (eIF4G), thus inhibiting 5'-cap dependent translation [].; GO: 0004197 cysteine-type endopeptidase activity, 0016032 viral reproduction, 0019082 viral protein processing; PDB: 2JQF_R 1QMY_B 1QOL_G 2JQG_R.
Probab=27.07 E-value=39 Score=24.99 Aligned_cols=24 Identities=17% Similarity=0.473 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhccCchhhhhhhhc
Q psy2985 32 HSLLNLTGEVLHFADRNFYADWWN 55 (76)
Q Consensus 32 h~~lN~~AEl~~F~DR~FY~dWWN 55 (76)
.||+|++..|++..|-.|+++--+
T Consensus 42 nCWlNaL~QL~~~~d~~~Fd~~Y~ 65 (193)
T PF05408_consen 42 NCWLNALLQLFRYVDEPFFDWYYD 65 (193)
T ss_dssp THHHHHHHHHHHHHT-GTTHHHHT
T ss_pred ChHHHHHHHHHHHcCcccchhhcC
Confidence 599999999999999999988775
No 15
>PF09351 DUF1993: Domain of unknown function (DUF1993); InterPro: IPR018531 This family of proteins are functionally uncharacterised. ; PDB: 2OQM_C 3QTH_A.
Probab=23.48 E-value=1.3e+02 Score=20.95 Aligned_cols=23 Identities=17% Similarity=0.340 Sum_probs=20.0
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHH
Q psy2985 10 QLTSDLEIPNHLIWLIFFYLFFH 32 (76)
Q Consensus 10 e~~lkl~~p~~~~~ll~Fy~~fh 32 (76)
+-+...++|+.++.+.+-|.+..
T Consensus 127 ~y~~~falPNfyFH~ttAYaILR 149 (162)
T PF09351_consen 127 DYLLSFALPNFYFHLTTAYAILR 149 (162)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcccHHHHHHHHHHHHHH
Confidence 55778899999999999999874
No 16
>PF07045 DUF1330: Protein of unknown function (DUF1330); InterPro: IPR010753 This family consists of several hypothetical bacterial proteins of around 90 residues in length. The function of this family is unknown.; PDB: 2FIU_B 3HHL_A 3DCA_D 3LO3_I.
Probab=21.03 E-value=34 Score=19.87 Aligned_cols=21 Identities=14% Similarity=0.495 Sum_probs=16.9
Q ss_pred HhccCchhhhhhhhcCCCHHH
Q psy2985 41 VLHFADRNFYADWWNADNTDT 61 (76)
Q Consensus 41 l~~F~DR~FY~dWWNa~~~~~ 61 (76)
|++|.|+.=-++|+||..+.+
T Consensus 43 iieFPs~~aa~~~~~speYq~ 63 (65)
T PF07045_consen 43 IIEFPSMEAAKAWYNSPEYQA 63 (65)
T ss_dssp EEEESSHHHHHHHHCSHHHHH
T ss_pred EEECCCHHHHHHHHCCHhHHh
Confidence 458889999999999977654
No 17
>PF02206 WSN: Domain of unknown function; InterPro: IPR003125 This domain has no known function and is found in Caenorhabditis elegans proteins normally at the N-terminal.
Probab=20.42 E-value=77 Score=18.63 Aligned_cols=16 Identities=13% Similarity=0.239 Sum_probs=12.6
Q ss_pred HHHHHHHhccCchhhh
Q psy2985 35 LNLTGEVLHFADRNFY 50 (76)
Q Consensus 35 lN~~AEl~~F~DR~FY 50 (76)
=.++||++++++..+.
T Consensus 34 ~~vIsElL~~~~~~~~ 49 (69)
T PF02206_consen 34 DDVISELLNIGSVSLS 49 (69)
T ss_pred HHHHHHHHcCCCCCHH
Confidence 3679999999997543
Done!