RPS-BLAST 2.2.26 [Sep-21-2011]

Database: CDD.v3.10 
           44,354 sequences; 10,937,602 total letters

Searching..................................................done

Query= psy2985
         (76 letters)



>gnl|CDD|215225 PLN02401, PLN02401, diacylglycerol o-acyltransferase.
          Length = 446

 Score = 88.7 bits (220), Expect = 1e-22
 Identities = 34/62 (54%), Positives = 42/62 (67%)

Query: 15  LEIPNHLIWLIFFYLFFHSLLNLTGEVLHFADRNFYADWWNADNTDTFWRNWNMPIHQWA 74
           L +PN  +WL  FY FFH  LN+  E+L F DR FY DWWNA   + +WR WNMP+H+W 
Sbjct: 284 LSVPNLYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNAKTVEEYWRMWNMPVHKWM 343

Query: 75  VR 76
           VR
Sbjct: 344 VR 345


>gnl|CDD|178780 PLN03242, PLN03242, diacylglycerol o-acyltransferase; Provisional.
          Length = 410

 Score = 88.3 bits (219), Expect = 2e-22
 Identities = 35/62 (56%), Positives = 41/62 (66%)

Query: 15  LEIPNHLIWLIFFYLFFHSLLNLTGEVLHFADRNFYADWWNADNTDTFWRNWNMPIHQWA 74
           L IPN  +WL+ FY FFH  LN+  E+L F DR FY DWWNA     +WR WNMP+H W 
Sbjct: 259 LSIPNLYVWLLMFYCFFHLWLNIVAELLCFGDREFYKDWWNASEVSEYWRLWNMPVHYWL 318

Query: 75  VR 76
           VR
Sbjct: 319 VR 320


>gnl|CDD|227389 COG5056, ARE1, Acyl-CoA cholesterol acyltransferase [Lipid
           metabolism].
          Length = 512

 Score = 69.1 bits (169), Expect = 1e-15
 Identities = 29/60 (48%), Positives = 40/60 (66%)

Query: 17  IPNHLIWLIFFYLFFHSLLNLTGEVLHFADRNFYADWWNADNTDTFWRNWNMPIHQWAVR 76
           IP  +++L+FFYL F  +LN   E+  FADR FY DWWN  + D F R WN P+H++ +R
Sbjct: 361 IPFIVLYLLFFYLIFDCILNAVAEITRFADRYFYGDWWNCVSWDEFSRIWNKPVHKFLLR 420


>gnl|CDD|217346 pfam03062, MBOAT, MBOAT, membrane-bound O-acyltransferase family.
           The MBOAT (membrane bound O-acyl transferase) family of
           membrane proteins contains a variety of acyltransferase
           enzymes. A conserved histidine has been suggested to be
           the active site residue.
          Length = 309

 Score = 42.5 bits (100), Expect = 3e-06
 Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 5/78 (6%)

Query: 4   SVRWLAQLTSDLEIPNHLIWLIFFYLFFHSLLNLTGEVL-----HFADRNFYADWWNADN 58
           SV +L + +    I     +  + +  F   L   G  L          NF     N+ +
Sbjct: 138 SVGFLLRFSVIAAILVMYAYSYYLFFDFAYSLFAIGVSLLFGIGFRTPENFNKPVENSQS 197

Query: 59  TDTFWRNWNMPIHQWAVR 76
              FWR WN+ +  W  R
Sbjct: 198 IKEFWRRWNISLSFWLRR 215


>gnl|CDD|191640 pfam06916, DUF1279, Protein of unknown function (DUF1279).  This
          family represents the C-terminus (approx. 120 residues)
          of a number of eukaryotic proteins of unknown function.
          Length = 88

 Score = 24.9 bits (55), Expect = 2.5
 Identities = 8/28 (28%), Positives = 12/28 (42%), Gaps = 2/28 (7%)

Query: 21 LIWLIFFYLFFHSLLNLT--GEVLHFAD 46
          L     FYL   S +++    E L  +D
Sbjct: 23 LASFGIFYLLVSSGVDVISLLEKLGISD 50


>gnl|CDD|163442 TIGR03730, tungstate_WtpA, tungstate ABC transporter binding
           protein WtpA.  Members of this protein family are
           tungstate (and, more weakly, molybdate) binding proteins
           of tungstate(/molybdate) ABC transporters, as first
           characterized in Pyrococcus furiosus. Model seed members
           and cutoffs, pending experimental evidence for more
           distant homologs, were chosen such that this model
           identifies select archaeal proteins, excluding weaker
           archaeal and all bacterial homologs. Note that this
           family is homologous to molybdate transporters, and that
           at least one other family of tungstate transporter
           binding protein, TupA, also exists.
          Length = 273

 Score = 25.4 bits (56), Expect = 2.7
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 10/50 (20%)

Query: 10  QLTSDLEIPNHLIWLIFFYLFFHSLLNLTGE-VLHFADRNFYADWWNADN 58
            L   + IPN+  W I F          T E VL + D++ YAD  N+DN
Sbjct: 61  TLIPQMMIPNYADWYIMF---------ATNEIVLAYTDKSKYADEINSDN 101


>gnl|CDD|237497 PRK13767, PRK13767, ATP-dependent helicase; Provisional.
          Length = 876

 Score = 25.2 bits (56), Expect = 4.1
 Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 31  FHSLLN-LTGEVLHFADRNFYADWWNADNTDTFWR 64
           F S+L  L G+     ++N YA  W  +    F +
Sbjct: 465 FESVLRYLAGDYGGLEEKNVYAKIWLDEEEGKFGK 499


>gnl|CDD|224093 COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type
           transport systems, permease components [Carbohydrate
           transport and metabolism].
          Length = 316

 Score = 24.8 bits (55), Expect = 4.7
 Identities = 11/35 (31%), Positives = 13/35 (37%), Gaps = 1/35 (2%)

Query: 4   SVRWLAQLTSDLEIPNHLIWLIFFYLFFHSLLNLT 38
           +  WL      L IP  +I  I     F  LL  T
Sbjct: 149 AFAWLGS-GRILGIPVPVIIFIVVAALFWLLLRRT 182


>gnl|CDD|151888 pfam11449, DUF2899, Protein of unknown function (DUF2899).  This is
           a bacterial family of uncharacterized proteins.
          Length = 298

 Score = 24.3 bits (53), Expect = 8.9
 Identities = 6/22 (27%), Positives = 9/22 (40%)

Query: 22  IWLIFFYLFFHSLLNLTGEVLH 43
            W+I  +L F   +   G  L 
Sbjct: 190 AWVIVAFLLFELAVAYLGLDLE 211


  Database: CDD.v3.10
    Posted date:  Mar 20, 2013  7:55 AM
  Number of letters in database: 10,937,602
  Number of sequences in database:  44,354
  
Lambda     K      H
   0.331    0.140    0.533 

Gapped
Lambda     K      H
   0.267   0.0741    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 4,090,878
Number of extensions: 312628
Number of successful extensions: 616
Number of sequences better than 10.0: 1
Number of HSP's gapped: 615
Number of HSP's successfully gapped: 32
Length of query: 76
Length of database: 10,937,602
Length adjustment: 46
Effective length of query: 30
Effective length of database: 8,897,318
Effective search space: 266919540
Effective search space used: 266919540
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 53 (24.2 bits)