Query psy2989
Match_columns 66
No_of_seqs 61 out of 63
Neff 4.7
Searched_HMMs 46136
Date Fri Aug 16 22:39:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2989.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2989hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF10324 7TM_GPCR_Srw: Serpent 98.9 3.3E-09 7.2E-14 74.3 6.7 66 1-66 36-103 (318)
2 PF00001 7tm_1: 7 transmembran 96.3 0.027 5.9E-07 35.8 6.7 58 2-66 25-82 (257)
3 PHA02834 chemokine receptor-li 90.4 1.4 3E-05 31.4 6.3 56 2-66 68-123 (323)
4 PHA03087 G protein-coupled che 87.4 2.9 6.4E-05 29.3 6.2 57 2-66 80-136 (335)
5 PHA03234 DNA packaging protein 82.9 5.9 0.00013 28.8 6.2 18 2-19 75-92 (338)
6 PHA03235 DNA packaging protein 79.3 5.4 0.00012 30.0 5.1 56 2-66 75-130 (409)
7 PF10320 7TM_GPCR_Srsx: Serpen 75.6 13 0.00028 25.9 5.9 56 2-66 31-86 (257)
8 PHA02638 CC chemokine receptor 66.0 22 0.00049 26.7 5.6 20 2-22 138-157 (417)
9 KOG4219|consensus 38.5 26 0.00057 27.7 2.2 58 2-66 76-133 (423)
10 KOG4220|consensus 35.9 39 0.00085 27.2 2.8 25 2-26 71-95 (503)
11 PF10853 DUF2650: Protein of u 31.1 46 0.00099 17.9 1.8 14 52-65 22-35 (38)
12 PF10323 7TM_GPCR_Srv: Serpent 29.3 1.1E+02 0.0025 21.6 4.1 16 3-18 40-55 (283)
13 PF10332 DUF2418: Protein of u 28.8 1.5E+02 0.0033 18.5 4.4 47 12-61 10-59 (99)
14 PF09726 Macoilin: Transmembra 21.1 3.8E+02 0.0082 22.3 6.1 10 51-60 121-130 (697)
No 1
>PF10324 7TM_GPCR_Srw: Serpentine type 7TM GPCR chemoreceptor Srw; InterPro: IPR019427 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes). They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The nematode Caenorhabditis elegans has only 14 types of chemosensory neuron, yet is able to sense and respond to several hundred different chemicals because each neuron detects several stimuli []. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' []. Chemoreception in C. elegans is mediated by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs). More than 1300 potential chemoreceptor genes have been identified in C. elegans, which are generally prefixed sr for serpentine receptor. The receptor superfamilies include Sra (Sra, Srb, Srab, Sre), Str (Srh, Str, Sri, Srd, Srj, Srm, Srn) and Srg (Srx, Srt, Srg, Sru, Srv, Srxa), as well as the families Srw, Srz, Srbc, Srsx and Srr [, , ]. Many of these proteins have homologues in Caenorhabditis briggsae. This entry represents serpentine receptor class w (Srw), which is a solo family amongst the superfamilies of chemoreceptors. The genes encoding Srw do not appear to be under as strong an adaptive evolutionary pressure as those of Srz [].
Probab=98.93 E-value=3.3e-09 Score=74.35 Aligned_cols=66 Identities=18% Similarity=0.362 Sum_probs=49.6
Q ss_pred CchhhHhhhhhhhhhhHHHHHHhhc--CCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q psy2989 1 MAMALSDMFTLLFPAPWLFYMYTFG--NHYKPLSPVAACYAWNIMNEVIPTLFHTASIWLTLALAVQR 66 (66)
Q Consensus 1 ~~mAvaDllvml~y~P~~~y~y~~~--~~~~~~~p~~~~y~~~~~h~~~~~~~HTiSiwLTv~LAv~R 66 (66)
+|+|+||++.|+.++|..+..+... +...............++++.++..+|++|.||+|+||++|
T Consensus 36 ~~Iai~Dl~~~~~~~~~~~~~~~~~~~~~~C~~~~sy~~~~~~~~~~~l~~~~~~~S~WL~V~mA~iR 103 (318)
T PF10324_consen 36 IGIAICDLLYMLSILIWELFFFIIFYEDDECIPPYSYFWAYFKLIMESLSDIFRRISIWLGVLMALIR 103 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999999999998665533 11222222333333446899999999999999999999988
No 2
>PF00001 7tm_1: 7 transmembrane receptor (rhodopsin family) Rhodopsin-like GPCR superfamily signature 5-hydroxytryptamine 7 receptor signature bradykinin receptor signature gastrin receptor signature melatonin receptor signature olfactory receptor signature; InterPro: IPR000276 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes). They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The rhodopsin-like GPCRs themselves represent a widespread protein family that includes hormone, neurotransmitter and light receptors, all of which transduce extracellular signals through interaction with guanine nucleotide-binding (G) proteins. Although their activating ligands vary widely in structure and character, the amino acid sequences of the receptors are very similar and are believed to adopt a common structural framework comprising 7 transmembrane (TM) helices [, , ].; GO: 0007186 G-protein coupled receptor protein signaling pathway, 0016021 integral to membrane; PDB: 2KI9_A 3QAK_A 2YDV_A 3VGA_A 3PWH_A 3RFM_A 3EML_A 3VG9_A 3REY_A 3UZA_A ....
Probab=96.31 E-value=0.027 Score=35.80 Aligned_cols=58 Identities=21% Similarity=0.370 Sum_probs=42.2
Q ss_pred chhhHhhhhhhhhhhHHHHHHhhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q psy2989 2 AMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMNEVIPTLFHTASIWLTLALAVQR 66 (66)
Q Consensus 2 ~mAvaDllvml~y~P~~~y~y~~~~~~~~~~p~~~~y~~~~~h~~~~~~~HTiSiwLTv~LAv~R 66 (66)
+||++|+++.+...|........+. .......|. +...+...+...|++..+.+|+-|
T Consensus 25 ~Lav~Dll~~~~~~~~~~~~~~~~~---~~~~~~~C~----~~~~~~~~~~~~s~~~~~~is~dR 82 (257)
T PF00001_consen 25 NLAVADLLVGLFCIPFYIYSLLFDD---WIFSSFLCR----IFGFLFYFSSFSSIFSLVAISIDR 82 (257)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHSS---CTSHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccccccccccccccc---ccccccccc----cccccccccccccccccccccccc
Confidence 6999999999999999887666411 112233343 445667788899999999998865
No 3
>PHA02834 chemokine receptor-like protein; Provisional
Probab=90.42 E-value=1.4 Score=31.40 Aligned_cols=56 Identities=13% Similarity=0.186 Sum_probs=32.5
Q ss_pred chhhHhhhhhhhhhhHHHHHHhhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q psy2989 2 AMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMNEVIPTLFHTASIWLTLALAVQR 66 (66)
Q Consensus 2 ~mAvaDllvml~y~P~~~y~y~~~~~~~~~~p~~~~y~~~~~h~~~~~~~HTiSiwLTv~LAv~R 66 (66)
+||+||+++ +..+|+.++... ++ -......|..... +..+....|++.-+.+|+-|
T Consensus 68 nLAiaDll~-~~~lP~~i~~~~-~~---w~~g~~~C~~~~~----~~~~~~~~Si~tL~~IsidR 123 (323)
T PHA02834 68 NIAMSDLML-VFSFPFIIHNDL-NE---WIFGEFMCKLVLG----VYFVGFFSNMFFVTLISIDR 123 (323)
T ss_pred HHHHHHHHH-HHHHHHHHHHHc-CC---cCCcchHHHhHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 699999986 567999876443 11 1122334654432 22233446777777777755
No 4
>PHA03087 G protein-coupled chemokine receptor-like protein; Provisional
Probab=87.45 E-value=2.9 Score=29.30 Aligned_cols=57 Identities=19% Similarity=0.254 Sum_probs=32.4
Q ss_pred chhhHhhhhhhhhhhHHHHHHhhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q psy2989 2 AMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMNEVIPTLFHTASIWLTLALAVQR 66 (66)
Q Consensus 2 ~mAvaDllvml~y~P~~~y~y~~~~~~~~~~p~~~~y~~~~~h~~~~~~~HTiSiwLTv~LAv~R 66 (66)
+||+||++..+ .+|...+....++. ......|..... +....=..|+|+.+.+|+-|
T Consensus 80 ~laisDll~~~-~~~~~~~~~~~~~~---~~~~~~C~~~~~----~~~~~~~~S~~~l~~iaidR 136 (335)
T PHA03087 80 NLAVSDLLFVM-TLPFQIYYYILFQW---SFGEFACKIVSG----LYYIGFYNSMNFITVMSVDR 136 (335)
T ss_pred HHHHHHHHHHH-hHHHHHHHHhCCCC---CCCcHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 68999988665 46766644332221 122334544432 22223357888888888765
No 5
>PHA03234 DNA packaging protein UL33; Provisional
Probab=82.93 E-value=5.9 Score=28.84 Aligned_cols=18 Identities=17% Similarity=0.154 Sum_probs=13.8
Q ss_pred chhhHhhhhhhhhhhHHH
Q psy2989 2 AMALSDMFTLLFPAPWLF 19 (66)
Q Consensus 2 ~mAvaDllvml~y~P~~~ 19 (66)
.||+||+++.+...|+..
T Consensus 75 NLAvaDLL~~l~lp~~~~ 92 (338)
T PHA03234 75 TLFASDFLHMLCVFFLTL 92 (338)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 699999999886655544
No 6
>PHA03235 DNA packaging protein UL33; Provisional
Probab=79.28 E-value=5.4 Score=30.01 Aligned_cols=56 Identities=18% Similarity=0.224 Sum_probs=30.6
Q ss_pred chhhHhhhhhhhhhhHHHHHHhhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q psy2989 2 AMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMNEVIPTLFHTASIWLTLALAVQR 66 (66)
Q Consensus 2 ~mAvaDllvml~y~P~~~y~y~~~~~~~~~~p~~~~y~~~~~h~~~~~~~HTiSiwLTv~LAv~R 66 (66)
.||+||+++ +..+|+.+.... .........|..... +..+.=..|++.-.++|+-|
T Consensus 75 NLAvsDLl~-l~~lP~~i~~~~----~~~~~g~~~Ck~~~~----l~~~~~~~Si~tL~~ISiDR 130 (409)
T PHA03235 75 NLYLANLLT-VFVLPFIMLSNQ----GLLSGSVAGCKFASL----LYYASCTVGFATVALIAADR 130 (409)
T ss_pred HHHHHHHHH-HHHHHHHHHhcC----ccccCCCCeehhHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 699999987 568998765321 100011234554432 22222346777666777655
No 7
>PF10320 7TM_GPCR_Srsx: Serpentine type 7TM GPCR chemoreceptor Srsx; InterPro: IPR019424 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes). They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The nematode Caenorhabditis elegans has only 14 types of chemosensory neuron, yet is able to sense and respond to several hundred different chemicals because each neuron detects several stimuli []. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' []. Chemoreception in C. elegans is mediated by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs). More than 1300 potential chemoreceptor genes have been identified in C. elegans, which are generally prefixed sr for serpentine receptor. The receptor superfamilies include Sra (Sra, Srb, Srab, Sre), Str (Srh, Str, Sri, Srd, Srj, Srm, Srn) and Srg (Srx, Srt, Srg, Sru, Srv, Srxa), as well as the families Srw, Srz, Srbc, Srsx and Srr [, , ]. Many of these proteins have homologues in Caenorhabditis briggsae. This entry represents serpentine receptor class sx (Srsx), which is a solo family amongst the superfamilies of chemoreceptors. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' [].
Probab=75.65 E-value=13 Score=25.89 Aligned_cols=56 Identities=21% Similarity=0.492 Sum_probs=41.4
Q ss_pred chhhHhhhhhhhhhhHHHHHHhhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q psy2989 2 AMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMNEVIPTLFHTASIWLTLALAVQR 66 (66)
Q Consensus 2 ~mAvaDllvml~y~P~~~y~y~~~~~~~~~~p~~~~y~~~~~h~~~~~~~HTiSiwLTv~LAv~R 66 (66)
.+|++|++.....+|...... +++. .+...|+.. ..++..+.+++..+.+.+|+=|
T Consensus 31 ~~~~~d~~~~~~~~~~~~~~~--~~~~---i~~~~Cf~~----~~~~~f~~~~qs~~~l~i~iDr 86 (257)
T PF10320_consen 31 ILCFADLICLLGTLPFMLFLF--RDHQ---ITRSECFWQ----IFFYIFFQCAQSVIMLAIAIDR 86 (257)
T ss_pred HHHHHHHHHHhhHHHHHHHHH--hhee---ccHHHHHHH----HHHHHHHHHHHHHHHHHHHhhh
Confidence 378999999999999988443 3322 446678654 4556678888999999888755
No 8
>PHA02638 CC chemokine receptor-like protein; Provisional
Probab=66.01 E-value=22 Score=26.69 Aligned_cols=20 Identities=25% Similarity=0.566 Sum_probs=15.2
Q ss_pred chhhHhhhhhhhhhhHHHHHH
Q psy2989 2 AMALSDMFTLLFPAPWLFYMY 22 (66)
Q Consensus 2 ~mAvaDllvml~y~P~~~y~y 22 (66)
+||+||++.. .-+|+.++..
T Consensus 138 nLAisDLl~~-l~lPf~i~~~ 157 (417)
T PHA02638 138 NLAISDLIFV-IDFPFIIYNE 157 (417)
T ss_pred HHHHHHHHHH-HHHHHHHHHH
Confidence 6899998864 5678877654
No 9
>KOG4219|consensus
Probab=38.54 E-value=26 Score=27.68 Aligned_cols=58 Identities=17% Similarity=0.227 Sum_probs=36.7
Q ss_pred chhhHhhhhhhhhhhHHHHHHhhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q psy2989 2 AMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMNEVIPTLFHTASIWLTLALAVQR 66 (66)
Q Consensus 2 ~mAvaDllvml~y~P~~~y~y~~~~~~~~~~p~~~~y~~~~~h~~~~~~~HTiSiwLTv~LAv~R 66 (66)
.||.||++..+.-.|+-+=+... +.=..+...|. ++..++.+-=+.|+.=-+++|+=|
T Consensus 76 NLAfADl~~s~Fn~~f~f~yal~---~~W~~G~f~C~----f~nf~~itav~vSVfTlvAiA~DR 133 (423)
T KOG4219|consen 76 NLAFADLSMSIFNTVFNFQYALH---QEWYFGSFYCR----FVNFFPITAVFVSVFTLVAIAIDR 133 (423)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHH---hccccccceee----eccccchhhhhHhHHHHHHHHHHH
Confidence 69999999999999997655542 21112222232 556666666666776666666543
No 10
>KOG4220|consensus
Probab=35.88 E-value=39 Score=27.24 Aligned_cols=25 Identities=16% Similarity=0.170 Sum_probs=22.2
Q ss_pred chhhHhhhhhhhhhhHHHHHHhhcC
Q psy2989 2 AMALSDMFTLLFPAPWLFYMYTFGN 26 (66)
Q Consensus 2 ~mAvaDllvml~y~P~~~y~y~~~~ 26 (66)
+||+||+..+...+|-...|-++|.
T Consensus 71 SLAcADliIG~~SMnl~t~Y~lmg~ 95 (503)
T KOG4220|consen 71 SLACADLIIGAFSMNLYTTYTLMGY 95 (503)
T ss_pred HHHHhhhhhheeechHHHHHHHHcc
Confidence 6999999999999999888777765
No 11
>PF10853 DUF2650: Protein of unknown function (DUF2650); InterPro: IPR022559 This region is found in proteins with unknown function in metazoa.
Probab=31.06 E-value=46 Score=17.90 Aligned_cols=14 Identities=36% Similarity=0.641 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHc
Q psy2989 52 HTASIWLTLALAVQ 65 (66)
Q Consensus 52 HTiSiwLTv~LAv~ 65 (66)
=-+.+|++++||+.
T Consensus 22 f~lq~Wv~v~l~v~ 35 (38)
T PF10853_consen 22 FRLQIWVIVLLAVL 35 (38)
T ss_pred HHHHHHHHHHHHHH
Confidence 34678999999873
No 12
>PF10323 7TM_GPCR_Srv: Serpentine type 7TM GPCR chemoreceptor Srv; InterPro: IPR019426 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes). They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The nematode Caenorhabditis elegans has only 14 types of chemosensory neuron, yet is able to sense and respond to several hundred different chemicals because each neuron detects several stimuli []. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' []. Chemoreception in C. elegans is mediated by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs). More than 1300 potential chemoreceptor genes have been identified in C. elegans, which are generally prefixed sr for serpentine receptor. The receptor superfamilies include Sra (Sra, Srb, Srab, Sre), Str (Srh, Str, Sri, Srd, Srj, Srm, Srn) and Srg (Srx, Srt, Srg, Sru, Srv, Srxa), as well as the families Srw, Srz, Srbc, Srsx and Srr [, , ]. Many of these proteins have homologues in Caenorhabditis briggsae. This entry represents serpentine receptor class v (Srv) from the Srg superfamily [, ]. Srg receptors contain seven hydrophobic, putative transmembrane, regions and can be distinguished from other 7TM GPCR receptors by their own characteristic TM signatures.
Probab=29.29 E-value=1.1e+02 Score=21.57 Aligned_cols=16 Identities=19% Similarity=0.368 Sum_probs=12.5
Q ss_pred hhhHhhhhhhhhhhHH
Q psy2989 3 MALSDMFTLLFPAPWL 18 (66)
Q Consensus 3 mAvaDllvml~y~P~~ 18 (66)
-++||++.|+.+.-..
T Consensus 40 ~~iaDi~~~~~~~~~~ 55 (283)
T PF10323_consen 40 HCIADILSMLFYFLLQ 55 (283)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4799999999886543
No 13
>PF10332 DUF2418: Protein of unknown function (DUF2418); InterPro: IPR018819 This entry represents the conserved 100 residue central region from a family of proteins found in fungi. It carries a characteristic EYD sequence motif. The function is not known.
Probab=28.80 E-value=1.5e+02 Score=18.53 Aligned_cols=47 Identities=6% Similarity=0.328 Sum_probs=29.0
Q ss_pred hhhhhHHHHHHhhcCCCCCCchhhHHH---HHHHHHHHHHHHHHHHHHHHHHH
Q psy2989 12 LFPAPWLFYMYTFGNHYKPLSPVAACY---AWNIMNEVIPTLFHTASIWLTLA 61 (66)
Q Consensus 12 l~y~P~~~y~y~~~~~~~~~~p~~~~y---~~~~~h~~~~~~~HTiSiwLTv~ 61 (66)
.+|-|+.+..+.. .+|........ +-.+++..+++++|+.-.++.+.
T Consensus 10 WdPs~f~l~LF~~---FSP~hvl~~~~~~~s~~~~~~~~~~~l~s~~l~~li~ 59 (99)
T PF10332_consen 10 WDPSPFSLRLFCL---FSPIHVLIYYLFLPSVTSFTTLFLMVLLSFQLYFLIS 59 (99)
T ss_pred ecCcHHHHHHHHH---cChHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455665555542 32322222222 45679999999999999888764
No 14
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes. ; GO: 0016021 integral to membrane
Probab=21.08 E-value=3.8e+02 Score=22.29 Aligned_cols=10 Identities=30% Similarity=0.873 Sum_probs=6.6
Q ss_pred HHHHHHHHHH
Q psy2989 51 FHTASIWLTL 60 (66)
Q Consensus 51 ~HTiSiwLTv 60 (66)
+=|+++|+..
T Consensus 121 ~~~~~~~~~~ 130 (697)
T PF09726_consen 121 LPTVSLWILF 130 (697)
T ss_pred HHHHHHHHHH
Confidence 4477888754
Done!