Query psy299
Match_columns 240
No_of_seqs 123 out of 1352
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 22:40:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy299.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/299hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2v1m_A Glutathione peroxidase; 100.0 6.1E-32 2.1E-36 214.0 18.3 164 38-201 4-168 (169)
2 2gs3_A PHGPX, GPX-4, phospholi 100.0 1.3E-31 4.6E-36 216.8 17.4 162 38-199 22-185 (185)
3 2i3y_A Epididymal secretory gl 100.0 1.5E-31 5.1E-36 222.4 17.9 162 39-201 29-212 (215)
4 2p5q_A Glutathione peroxidase 100.0 1.5E-31 5E-36 212.0 16.9 164 38-201 5-169 (170)
5 3dwv_A Glutathione peroxidase- 100.0 3E-32 1E-36 221.1 12.6 169 36-204 17-187 (187)
6 2f8a_A Glutathione peroxidase 100.0 2.9E-31 9.9E-36 219.5 18.3 162 40-201 21-208 (208)
7 2obi_A PHGPX, GPX-4, phospholi 100.0 2.1E-31 7E-36 215.1 15.8 168 32-199 14-183 (183)
8 3kij_A Probable glutathione pe 100.0 5.2E-31 1.8E-35 212.3 16.4 160 38-201 11-171 (180)
9 2r37_A Glutathione peroxidase 100.0 6.5E-31 2.2E-35 217.3 16.6 162 40-202 12-195 (207)
10 2vup_A Glutathione peroxidase- 100.0 1.9E-30 6.6E-35 210.8 16.1 167 36-202 19-187 (190)
11 2p31_A CL683, glutathione pero 100.0 1.7E-30 5.9E-35 209.5 14.4 160 37-200 21-181 (181)
12 3cmi_A Peroxiredoxin HYR1; thi 100.0 7.8E-30 2.7E-34 203.5 14.2 156 41-202 8-170 (171)
13 3eyt_A Uncharacterized protein 100.0 1.6E-28 5.5E-33 192.4 13.5 150 41-203 2-155 (158)
14 3lor_A Thiol-disulfide isomera 100.0 1.9E-28 6.7E-33 192.1 12.6 149 41-202 5-157 (160)
15 3fw2_A Thiol-disulfide oxidore 100.0 1E-27 3.6E-32 186.7 15.1 142 37-201 3-149 (150)
16 4hde_A SCO1/SENC family lipopr 100.0 1E-27 3.6E-32 191.9 14.3 156 39-200 6-170 (170)
17 3u5r_E Uncharacterized protein 100.0 9.4E-28 3.2E-32 199.3 13.3 154 35-204 28-191 (218)
18 4fo5_A Thioredoxin-like protei 99.9 8.4E-28 2.9E-32 185.8 10.4 137 37-197 5-142 (143)
19 1xzo_A BSSCO, hypothetical pro 99.9 8E-27 2.8E-31 185.5 16.0 156 36-201 4-173 (174)
20 4g2e_A Peroxiredoxin; redox pr 99.9 3.3E-28 1.1E-32 192.3 7.7 147 38-198 3-156 (157)
21 3lwa_A Secreted thiol-disulfid 99.9 3.3E-27 1.1E-31 189.9 13.0 145 38-201 30-182 (183)
22 3ewl_A Uncharacterized conserv 99.9 2.1E-27 7.1E-32 182.8 10.9 137 40-200 2-141 (142)
23 3fkf_A Thiol-disulfide oxidore 99.9 1.1E-26 3.6E-31 179.3 14.7 142 37-201 3-147 (148)
24 3eur_A Uncharacterized protein 99.9 1.1E-26 3.6E-31 179.4 14.0 136 37-196 3-141 (142)
25 3gkn_A Bacterioferritin comigr 99.9 1.1E-26 3.8E-31 183.3 13.4 148 38-199 6-161 (163)
26 3hcz_A Possible thiol-disulfid 99.9 1.2E-26 4E-31 179.0 13.1 143 37-200 3-146 (148)
27 2lrn_A Thiol:disulfide interch 99.9 1.7E-26 5.7E-31 180.2 14.0 141 39-202 3-143 (152)
28 3me7_A Putative uncharacterize 99.9 9.7E-27 3.3E-31 186.0 12.3 160 40-205 2-167 (170)
29 2f9s_A Thiol-disulfide oxidore 99.9 1.5E-26 5.1E-31 180.0 12.9 141 40-203 1-141 (151)
30 2cvb_A Probable thiol-disulfid 99.9 2.2E-26 7.6E-31 185.8 14.1 151 37-204 5-163 (188)
31 3or5_A Thiol:disulfide interch 99.9 4.1E-26 1.4E-30 179.4 15.1 148 37-202 6-153 (165)
32 2ywi_A Hypothetical conserved 99.9 1.6E-26 5.3E-31 187.5 12.9 154 35-204 14-178 (196)
33 3drn_A Peroxiredoxin, bacterio 99.9 2.2E-26 7.6E-31 181.8 13.3 141 39-199 2-148 (161)
34 2ggt_A SCO1 protein homolog, m 99.9 2.5E-26 8.6E-31 180.7 13.0 151 44-201 2-162 (164)
35 3raz_A Thioredoxin-related pro 99.9 2.3E-26 7.9E-31 179.2 12.7 139 44-202 4-142 (151)
36 4gqc_A Thiol peroxidase, perox 99.9 6.4E-28 2.2E-32 192.2 3.5 150 38-201 4-161 (164)
37 2l5o_A Putative thioredoxin; s 99.9 6.6E-26 2.3E-30 176.3 14.1 143 40-204 3-145 (153)
38 2rli_A SCO2 protein homolog, m 99.9 7.6E-26 2.6E-30 179.3 13.7 149 46-201 7-165 (171)
39 2lrt_A Uncharacterized protein 99.9 1.5E-25 5.2E-30 175.5 14.4 140 37-201 7-146 (152)
40 3gl3_A Putative thiol:disulfid 99.9 2.9E-25 1E-29 172.5 15.6 140 39-202 3-144 (152)
41 2lja_A Putative thiol-disulfid 99.9 3.3E-25 1.1E-29 172.2 15.3 142 39-202 3-145 (152)
42 1jfu_A Thiol:disulfide interch 99.9 1.5E-25 5.2E-30 180.4 13.8 149 37-203 32-183 (186)
43 3kh7_A Thiol:disulfide interch 99.9 1.3E-25 4.4E-30 180.2 12.2 142 34-201 25-168 (176)
44 3ixr_A Bacterioferritin comigr 99.9 1.2E-25 4.2E-30 181.0 11.8 151 35-199 17-177 (179)
45 3kcm_A Thioredoxin family prot 99.9 3.5E-25 1.2E-29 172.4 13.8 142 39-202 2-145 (154)
46 2bmx_A Alkyl hydroperoxidase C 99.9 3.6E-25 1.2E-29 180.3 14.4 156 38-212 3-184 (195)
47 2yzh_A Probable thiol peroxida 99.9 2.1E-25 7.1E-30 177.9 12.7 145 37-199 19-171 (171)
48 1we0_A Alkyl hydroperoxide red 99.9 5.3E-25 1.8E-29 178.0 15.1 143 40-200 2-157 (187)
49 2b5x_A YKUV protein, TRXY; thi 99.9 3.5E-25 1.2E-29 170.5 12.8 145 39-202 1-147 (148)
50 2k6v_A Putative cytochrome C o 99.9 2E-25 6.7E-30 176.9 11.3 152 39-199 10-172 (172)
51 1n8j_A AHPC, alkyl hydroperoxi 99.9 2.3E-25 7.7E-30 180.6 11.7 150 40-207 2-170 (186)
52 2c0d_A Thioredoxin peroxidase 99.9 2.8E-25 9.5E-30 185.2 12.4 151 38-207 24-197 (221)
53 3ha9_A Uncharacterized thiored 99.9 3.1E-25 1.1E-29 175.1 11.8 143 38-201 10-165 (165)
54 3p7x_A Probable thiol peroxida 99.9 1.7E-25 5.8E-30 177.6 10.0 129 35-183 16-146 (166)
55 3erw_A Sporulation thiol-disul 99.9 4E-25 1.4E-29 169.6 11.7 138 37-195 7-144 (145)
56 1xvw_A Hypothetical protein RV 99.9 4.5E-25 1.5E-29 173.4 12.1 133 39-189 9-145 (160)
57 2h01_A 2-Cys peroxiredoxin; th 99.9 6.1E-25 2.1E-29 178.4 12.8 162 40-220 1-185 (192)
58 3ia1_A THIO-disulfide isomeras 99.9 4.8E-25 1.6E-29 171.8 11.5 143 38-202 4-146 (154)
59 1uul_A Tryparedoxin peroxidase 99.9 8.5E-25 2.9E-29 179.2 13.6 153 37-207 4-178 (202)
60 2b7k_A SCO1 protein; metalloch 99.9 7.3E-25 2.5E-29 179.5 12.6 157 38-201 12-180 (200)
61 1psq_A Probable thiol peroxida 99.9 1.4E-24 4.7E-29 171.9 13.0 142 37-197 14-162 (163)
62 1zzo_A RV1677; thioredoxin fol 99.9 1.9E-24 6.6E-29 163.8 13.3 134 41-200 1-135 (136)
63 1q98_A Thiol peroxidase, TPX; 99.9 7.7E-25 2.6E-29 173.8 11.1 132 37-184 15-148 (165)
64 1zof_A Alkyl hydroperoxide-red 99.9 1.1E-24 3.9E-29 177.6 12.3 141 40-199 2-160 (198)
65 2pn8_A Peroxiredoxin-4; thiore 99.9 2.7E-25 9.1E-30 183.9 8.7 153 37-207 17-190 (211)
66 2hyx_A Protein DIPZ; thioredox 99.9 8.7E-25 3E-29 193.9 12.3 151 34-202 46-201 (352)
67 2i81_A 2-Cys peroxiredoxin; st 99.9 1.1E-24 3.8E-29 180.5 12.2 152 37-207 19-193 (213)
68 1lu4_A Soluble secreted antige 99.9 2.7E-24 9.1E-29 163.4 12.6 132 43-200 2-136 (136)
69 1xvq_A Thiol peroxidase; thior 99.9 2.6E-24 8.9E-29 172.4 12.9 150 35-202 14-167 (175)
70 3ztl_A Thioredoxin peroxidase; 99.9 2E-24 6.8E-29 179.9 12.4 137 35-189 36-183 (222)
71 3zrd_A Thiol peroxidase; oxido 99.9 2.2E-24 7.5E-29 177.0 12.3 148 34-197 47-198 (200)
72 1zye_A Thioredoxin-dependent p 99.9 3.8E-24 1.3E-28 178.0 13.6 156 34-207 22-198 (220)
73 1qmv_A Human thioredoxin perox 99.9 3.1E-24 1.1E-28 175.0 12.7 152 38-207 4-176 (197)
74 2jsy_A Probable thiol peroxida 99.9 5.2E-25 1.8E-29 174.5 7.8 146 35-200 14-167 (167)
75 2a4v_A Peroxiredoxin DOT5; yea 99.9 1.3E-24 4.6E-29 171.0 9.4 144 37-200 5-154 (159)
76 3hdc_A Thioredoxin family prot 99.9 4.6E-24 1.6E-28 167.5 11.1 139 33-197 9-149 (158)
77 3qpm_A Peroxiredoxin; oxidored 99.9 9.6E-24 3.3E-28 178.0 12.9 156 34-207 43-219 (240)
78 2ls5_A Uncharacterized protein 99.8 7.6E-26 2.6E-30 177.6 0.0 142 38-201 6-149 (159)
79 2b1k_A Thiol:disulfide interch 99.9 4.7E-24 1.6E-28 168.8 10.3 141 35-201 18-161 (168)
80 4evm_A Thioredoxin family prot 99.9 1.9E-23 6.5E-28 158.0 12.9 136 44-198 1-137 (138)
81 2h30_A Thioredoxin, peptide me 99.9 3.9E-24 1.3E-28 168.1 9.3 142 40-201 15-157 (164)
82 1tp9_A Peroxiredoxin, PRX D (t 99.9 8.5E-24 2.9E-28 167.5 10.2 132 39-185 4-146 (162)
83 1kng_A Thiol:disulfide interch 99.9 5E-24 1.7E-28 166.0 8.6 140 36-201 5-153 (156)
84 3mng_A Peroxiredoxin-5, mitoch 99.9 1.3E-23 4.3E-28 168.9 10.2 147 36-197 12-172 (173)
85 3tjj_A Peroxiredoxin-4; thiore 99.9 3.2E-23 1.1E-27 176.2 12.6 160 35-212 58-238 (254)
86 2wfc_A Peroxiredoxin 5, PRDX5; 99.9 3.5E-23 1.2E-27 165.2 11.9 131 39-184 3-141 (167)
87 3uma_A Hypothetical peroxiredo 99.9 2.3E-23 8E-28 168.9 9.6 145 38-197 25-183 (184)
88 1prx_A HORF6; peroxiredoxin, h 99.9 9.5E-23 3.3E-27 170.2 11.5 155 38-207 4-182 (224)
89 2v2g_A Peroxiredoxin 6; oxidor 99.9 8.2E-23 2.8E-27 171.6 10.4 154 39-207 3-178 (233)
90 3keb_A Probable thiol peroxida 99.9 2.4E-22 8.1E-27 167.4 12.5 149 35-202 18-178 (224)
91 1i5g_A Tryparedoxin II; electr 99.9 8.5E-23 2.9E-27 157.5 8.3 121 41-183 3-127 (144)
92 1xcc_A 1-Cys peroxiredoxin; un 99.9 1.5E-22 5E-27 168.6 10.2 147 39-200 3-166 (220)
93 3s9f_A Tryparedoxin; thioredox 99.9 5.3E-23 1.8E-27 163.4 5.0 126 35-183 18-147 (165)
94 2pwj_A Mitochondrial peroxired 99.9 6.2E-22 2.1E-26 158.4 11.1 131 40-185 8-154 (171)
95 1nm3_A Protein HI0572; hybrid, 99.9 6.5E-22 2.2E-26 166.2 11.3 133 39-186 3-144 (241)
96 3a2v_A Probable peroxiredoxin; 99.9 4.7E-22 1.6E-26 168.4 9.9 151 38-206 4-174 (249)
97 1o8x_A Tryparedoxin, TRYX, TXN 99.9 3E-22 1E-26 154.9 7.9 121 40-183 3-127 (146)
98 1o73_A Tryparedoxin; electron 99.9 4.9E-22 1.7E-26 152.9 8.4 121 40-183 3-127 (144)
99 2lus_A Thioredoxion; CR-Trp16, 99.8 1.8E-23 6.1E-28 160.5 0.0 122 43-184 2-127 (143)
100 3tue_A Tryparedoxin peroxidase 99.9 6.6E-22 2.2E-26 164.0 9.1 167 30-214 17-205 (219)
101 3sbc_A Peroxiredoxin TSA1; alp 99.9 1.4E-21 4.7E-26 161.8 9.6 143 39-199 23-180 (216)
102 4eo3_A Bacterioferritin comigr 99.8 4.6E-20 1.6E-24 161.8 12.0 165 43-236 2-170 (322)
103 4f82_A Thioredoxin reductase; 99.8 8.6E-19 2.9E-23 140.7 10.3 133 38-185 9-158 (176)
104 2xhf_A Peroxiredoxin 5; oxidor 99.7 4.1E-17 1.4E-21 130.5 12.0 132 37-184 12-151 (171)
105 1xiy_A Peroxiredoxin, pfaop; a 99.7 1.9E-17 6.7E-22 133.7 9.0 130 40-184 2-153 (182)
106 2fwh_A Thiol:disulfide interch 99.7 2.2E-17 7.6E-22 126.2 4.0 117 39-198 4-126 (134)
107 2l57_A Uncharacterized protein 99.7 1.7E-16 5.8E-21 119.5 8.0 113 44-202 5-119 (126)
108 3hxs_A Thioredoxin, TRXP; elec 99.7 6.7E-16 2.3E-20 118.3 11.2 105 50-201 36-140 (141)
109 2ju5_A Thioredoxin disulfide i 99.6 3.8E-16 1.3E-20 122.3 6.8 123 40-201 25-153 (154)
110 3ul3_B Thioredoxin, thioredoxi 99.6 5.6E-15 1.9E-19 111.6 9.3 108 41-197 20-127 (128)
111 3p2a_A Thioredoxin 2, putative 99.5 3.6E-14 1.2E-18 109.7 9.3 116 40-202 30-145 (148)
112 3f9u_A Putative exported cytoc 99.5 2.7E-14 9.2E-19 113.2 7.9 122 58-201 40-167 (172)
113 3fk8_A Disulphide isomerase; A 99.5 1E-13 3.5E-18 105.1 9.2 97 63-199 27-132 (133)
114 3cxg_A Putative thioredoxin; m 99.5 2.6E-14 8.8E-19 109.1 4.9 106 48-202 23-131 (133)
115 2l5l_A Thioredoxin; structural 99.5 2.4E-13 8.3E-18 103.7 10.2 93 64-203 37-129 (136)
116 2djj_A PDI, protein disulfide- 99.5 3.6E-13 1.2E-17 100.0 10.5 105 50-202 9-119 (121)
117 3qfa_C Thioredoxin; protein-pr 99.5 1.5E-13 5.2E-18 102.1 8.2 89 62-199 28-116 (116)
118 2kuc_A Putative disulphide-iso 99.5 8.3E-14 2.8E-18 104.9 6.4 103 57-203 19-124 (130)
119 2voc_A Thioredoxin; electron t 99.4 2.8E-13 9.5E-18 99.8 8.8 93 64-203 16-108 (112)
120 1dby_A Chloroplast thioredoxin 99.4 5.4E-13 1.8E-17 96.8 10.2 90 64-200 18-107 (107)
121 3zzx_A Thioredoxin; oxidoreduc 99.4 6.1E-14 2.1E-18 103.1 5.1 88 61-197 16-103 (105)
122 2trx_A Thioredoxin; electron t 99.4 4.1E-13 1.4E-17 97.6 9.0 90 64-200 19-108 (108)
123 2dml_A Protein disulfide-isome 99.4 1.4E-12 4.8E-17 98.1 12.2 93 64-202 34-126 (130)
124 3f3q_A Thioredoxin-1; His TAG, 99.4 4.3E-13 1.5E-17 98.4 8.8 87 64-199 23-109 (109)
125 3die_A Thioredoxin, TRX; elect 99.4 4.4E-13 1.5E-17 96.9 8.7 89 64-199 18-106 (106)
126 3tco_A Thioredoxin (TRXA-1); d 99.4 5.4E-13 1.8E-17 96.7 9.2 90 64-200 20-109 (109)
127 1thx_A Thioredoxin, thioredoxi 99.4 7.7E-13 2.6E-17 97.0 10.1 91 64-201 24-114 (115)
128 1nsw_A Thioredoxin, TRX; therm 99.4 2.6E-13 9E-18 98.1 7.4 89 64-199 16-104 (105)
129 1t00_A Thioredoxin, TRX; redox 99.4 3.9E-13 1.4E-17 98.4 8.5 90 64-200 22-111 (112)
130 2pu9_C TRX-F, thioredoxin F-ty 99.4 6.2E-13 2.1E-17 97.4 9.5 92 60-199 19-110 (111)
131 1z6n_A Hypothetical protein PA 99.4 2.5E-13 8.5E-18 108.1 7.5 92 59-196 48-139 (167)
132 3d6i_A Monothiol glutaredoxin- 99.4 7.1E-13 2.4E-17 97.2 9.4 91 63-200 19-109 (112)
133 3gix_A Thioredoxin-like protei 99.4 1.6E-13 5.4E-18 106.9 5.9 91 64-201 22-122 (149)
134 2dj3_A Protein disulfide-isome 99.4 1.2E-12 4.2E-17 98.8 10.5 109 49-202 8-120 (133)
135 4euy_A Uncharacterized protein 99.4 4.3E-13 1.5E-17 97.5 7.6 88 64-199 17-104 (105)
136 2vlu_A Thioredoxin, thioredoxi 99.4 1.3E-13 4.5E-18 102.7 5.0 113 40-201 7-121 (122)
137 1w4v_A Thioredoxin, mitochondr 99.4 7.6E-13 2.6E-17 98.5 8.9 89 64-199 30-118 (119)
138 1ep7_A Thioredoxin CH1, H-type 99.4 9.7E-13 3.3E-17 96.2 9.3 88 65-200 24-111 (112)
139 1xfl_A Thioredoxin H1; AT3G510 99.4 8.2E-13 2.8E-17 99.4 8.9 108 44-200 15-124 (124)
140 1sen_A Thioredoxin-like protei 99.4 1.6E-14 5.4E-19 114.4 -0.7 113 45-201 27-149 (164)
141 2o8v_B Thioredoxin 1; disulfid 99.4 8.9E-13 3E-17 99.8 8.9 90 64-200 39-128 (128)
142 1x5d_A Protein disulfide-isome 99.4 9.1E-13 3.1E-17 99.3 8.9 93 64-202 24-119 (133)
143 2j23_A Thioredoxin; immune pro 99.4 8.6E-13 3E-17 98.6 8.5 90 64-200 32-121 (121)
144 2ppt_A Thioredoxin-2; thiredox 99.4 3.7E-13 1.3E-17 105.4 6.7 92 64-202 63-154 (155)
145 1fb6_A Thioredoxin M; electron 99.4 1.3E-12 4.5E-17 94.1 8.8 102 51-199 3-105 (105)
146 2e0q_A Thioredoxin; electron t 99.4 1.6E-12 5.3E-17 93.2 9.0 89 64-200 15-103 (104)
147 1x5e_A Thioredoxin domain cont 99.4 1.5E-12 5.2E-17 97.6 9.1 88 67-201 24-111 (126)
148 2dj1_A Protein disulfide-isome 99.4 1E-12 3.5E-17 100.1 8.2 104 52-202 21-126 (140)
149 3d22_A TRXH4, thioredoxin H-ty 99.4 1.1E-12 3.9E-17 99.9 8.4 96 58-202 39-134 (139)
150 3m9j_A Thioredoxin; oxidoreduc 99.4 1.6E-12 5.6E-17 93.8 8.6 89 62-199 17-105 (105)
151 2yzu_A Thioredoxin; redox prot 99.4 1.9E-12 6.4E-17 93.7 8.9 92 64-202 17-108 (109)
152 3hz4_A Thioredoxin; NYSGXRC, P 99.4 8.6E-13 3E-17 101.2 7.3 91 64-201 23-113 (140)
153 2i4a_A Thioredoxin; acidophIle 99.4 1.9E-12 6.4E-17 93.7 8.7 89 64-199 19-107 (107)
154 2lst_A Thioredoxin; structural 99.1 5E-14 1.7E-18 106.3 0.0 104 55-202 9-118 (130)
155 3gnj_A Thioredoxin domain prot 99.4 2.2E-12 7.4E-17 94.0 8.8 90 64-200 21-110 (111)
156 3qou_A Protein YBBN; thioredox 99.4 1.7E-12 6E-17 110.8 9.2 93 61-200 22-114 (287)
157 3apq_A DNAJ homolog subfamily 99.4 4.2E-13 1.5E-17 109.9 5.1 109 47-202 96-204 (210)
158 2wz9_A Glutaredoxin-3; protein 99.4 2.8E-12 9.5E-17 99.9 9.4 91 63-202 30-120 (153)
159 2xc2_A Thioredoxinn; oxidoredu 99.4 5.7E-13 2E-17 98.6 5.1 90 60-199 28-117 (117)
160 1faa_A Thioredoxin F; electron 99.4 3E-12 1E-16 95.6 9.0 90 62-199 34-123 (124)
161 1ti3_A Thioredoxin H, PTTRXH1; 99.3 4.3E-12 1.5E-16 92.7 9.4 89 63-200 24-112 (113)
162 2vim_A Thioredoxin, TRX; thior 99.3 4.7E-12 1.6E-16 91.0 9.2 90 61-199 15-104 (104)
163 1r26_A Thioredoxin; redox-acti 99.3 2.9E-12 1E-16 96.7 8.2 89 64-201 36-124 (125)
164 1gh2_A Thioredoxin-like protei 99.3 3.4E-12 1.2E-16 92.8 8.3 87 64-199 20-106 (107)
165 2l6c_A Thioredoxin; oxidoreduc 99.3 3.6E-12 1.2E-16 93.6 8.1 90 64-201 18-107 (110)
166 1xwb_A Thioredoxin; dimerizati 99.3 6.3E-12 2.1E-16 90.7 9.2 89 63-199 18-106 (106)
167 1v98_A Thioredoxin; oxidoreduc 99.3 6.2E-12 2.1E-16 96.1 9.5 90 65-201 50-139 (140)
168 2oe3_A Thioredoxin-3; electron 99.3 3.8E-12 1.3E-16 94.3 8.0 85 64-197 29-113 (114)
169 1syr_A Thioredoxin; SGPP, stru 99.3 5.8E-12 2E-16 92.5 8.9 88 64-200 25-112 (112)
170 2vm1_A Thioredoxin, thioredoxi 99.3 4.8E-12 1.6E-16 93.2 8.4 90 64-202 27-116 (118)
171 3emx_A Thioredoxin; structural 99.3 2.1E-12 7.2E-17 98.5 6.5 93 67-202 33-128 (135)
172 2i1u_A Thioredoxin, TRX, MPT46 99.3 3.2E-12 1.1E-16 94.7 7.3 91 64-201 29-119 (121)
173 2f51_A Thioredoxin; electron t 99.3 1.1E-12 3.9E-17 97.7 4.7 105 50-202 5-115 (118)
174 1zma_A Bacterocin transport ac 99.3 3.8E-12 1.3E-16 94.4 7.1 90 64-196 28-117 (118)
175 3dxb_A Thioredoxin N-terminall 99.3 1.4E-11 5E-16 101.7 10.9 95 64-205 29-123 (222)
176 2av4_A Thioredoxin-like protei 99.3 7.4E-12 2.5E-16 98.0 8.5 91 64-201 40-140 (160)
177 1qgv_A Spliceosomal protein U5 99.3 7.4E-12 2.5E-16 96.6 8.2 91 64-201 22-122 (142)
178 2dj0_A Thioredoxin-related tra 99.3 3.3E-12 1.1E-16 97.4 6.0 91 61-191 22-112 (137)
179 3aps_A DNAJ homolog subfamily 99.3 4.2E-12 1.4E-16 94.4 6.0 91 64-201 20-114 (122)
180 3h79_A Thioredoxin-like protei 99.3 1.4E-11 4.9E-16 92.5 8.9 90 64-198 32-126 (127)
181 3uvt_A Thioredoxin domain-cont 99.3 1.5E-11 5E-16 89.5 7.7 87 65-197 21-109 (111)
182 1oaz_A Thioredoxin 1; immune s 99.2 9.5E-12 3.3E-16 93.5 6.6 90 64-200 20-123 (123)
183 2qsi_A Putative hydrogenase ex 99.2 2.4E-11 8.4E-16 93.2 8.5 87 66-199 34-122 (137)
184 1mek_A Protein disulfide isome 99.2 1.2E-11 4.1E-16 90.9 6.5 92 64-201 23-118 (120)
185 2qgv_A Hydrogenase-1 operon pr 99.2 3.3E-11 1.1E-15 92.8 8.6 92 64-201 33-126 (140)
186 3idv_A Protein disulfide-isome 99.2 3.3E-11 1.1E-15 99.7 8.8 103 52-201 19-123 (241)
187 1wmj_A Thioredoxin H-type; str 99.2 7.5E-12 2.6E-16 93.8 4.3 91 63-202 34-124 (130)
188 2yj7_A LPBCA thioredoxin; oxid 98.8 1.7E-12 5.8E-17 93.4 0.0 89 64-199 18-106 (106)
189 3ph9_A Anterior gradient prote 99.2 6.6E-12 2.2E-16 98.2 3.3 91 64-200 43-145 (151)
190 1fo5_A Thioredoxin; disulfide 99.2 1.1E-10 3.6E-15 80.9 8.7 83 66-199 3-85 (85)
191 1nho_A Probable thioredoxin; b 99.2 3.2E-11 1.1E-15 83.6 5.9 83 67-200 3-85 (85)
192 3ira_A Conserved protein; meth 99.2 8.4E-11 2.9E-15 93.9 8.4 87 58-182 32-121 (173)
193 2dbc_A PDCL2, unnamed protein 99.1 1.1E-10 3.8E-15 89.0 8.3 42 64-107 29-70 (135)
194 1a8l_A Protein disulfide oxido 99.1 2.2E-10 7.4E-15 94.1 10.2 90 64-199 133-225 (226)
195 3q6o_A Sulfhydryl oxidase 1; p 99.1 2.7E-10 9.1E-15 95.2 9.9 95 64-203 29-130 (244)
196 3t58_A Sulfhydryl oxidase 1; o 99.1 2.8E-10 9.5E-15 105.5 10.5 97 64-203 29-130 (519)
197 2es7_A Q8ZP25_salty, putative 99.1 4.1E-10 1.4E-14 87.0 8.4 89 66-202 35-127 (142)
198 2hls_A Protein disulfide oxido 99.0 1.6E-09 5.4E-14 90.8 11.2 90 62-201 135-227 (243)
199 3ed3_A Protein disulfide-isome 99.0 1.2E-09 4E-14 94.4 9.6 119 64-226 34-172 (298)
200 2r2j_A Thioredoxin domain-cont 99.0 1.6E-09 5.5E-14 96.5 10.5 119 64-229 21-149 (382)
201 1wou_A Thioredoxin -related pr 99.0 2.1E-10 7.3E-15 85.8 2.8 47 60-107 19-72 (123)
202 3f8u_A Protein disulfide-isome 99.0 2.2E-09 7.4E-14 98.0 9.8 93 64-202 369-463 (481)
203 3evi_A Phosducin-like protein 98.9 1.8E-09 6.1E-14 80.8 7.5 41 65-107 23-63 (118)
204 1sji_A Calsequestrin 2, calseq 98.9 3.3E-09 1.1E-13 93.2 9.6 117 64-228 27-155 (350)
205 3idv_A Protein disulfide-isome 98.9 5.8E-09 2E-13 86.0 10.3 90 64-200 146-237 (241)
206 1ilo_A Conserved hypothetical 98.9 6.8E-09 2.3E-13 70.5 8.8 36 68-104 2-37 (77)
207 3dml_A Putative uncharacterize 98.9 7.4E-10 2.5E-14 82.6 3.8 95 64-202 17-112 (116)
208 1a0r_P Phosducin, MEKA, PP33; 98.9 5.8E-09 2E-13 87.7 9.7 42 64-107 132-173 (245)
209 3gyk_A 27KDA outer membrane pr 98.9 1.8E-09 6E-14 85.4 6.0 136 55-200 12-173 (175)
210 2b5e_A Protein disulfide-isome 98.9 5.4E-09 1.9E-13 96.1 9.7 92 64-201 30-123 (504)
211 2trc_P Phosducin, MEKA, PP33; 98.9 2.6E-09 8.8E-14 88.2 6.3 41 64-106 119-159 (217)
212 3uem_A Protein disulfide-isome 98.8 6.2E-09 2.1E-13 91.5 8.5 89 64-199 266-356 (361)
213 3f8u_A Protein disulfide-isome 98.8 6.8E-09 2.3E-13 94.8 8.8 92 64-202 20-111 (481)
214 3kp8_A Vkorc1/thioredoxin doma 98.8 1.1E-10 3.8E-15 85.6 -2.6 40 56-95 3-42 (106)
215 2ywm_A Glutaredoxin-like prote 98.8 9.2E-09 3.2E-13 84.6 8.4 87 64-201 135-221 (229)
216 2b5e_A Protein disulfide-isome 98.8 5.2E-09 1.8E-13 96.2 7.1 90 64-201 375-468 (504)
217 3apo_A DNAJ homolog subfamily 98.8 1.1E-08 3.7E-13 98.9 9.6 119 60-226 450-574 (780)
218 3iv4_A Putative oxidoreductase 98.8 1E-08 3.5E-13 75.7 6.7 85 65-194 24-110 (112)
219 2dlx_A UBX domain-containing p 98.8 2E-08 6.8E-13 78.5 8.7 93 64-201 41-137 (153)
220 3qcp_A QSOX from trypanosoma b 98.8 1.8E-08 6E-13 92.0 9.5 45 63-107 40-91 (470)
221 3hd5_A Thiol:disulfide interch 98.7 1.6E-08 5.5E-13 81.3 7.2 131 63-201 23-185 (195)
222 3apo_A DNAJ homolog subfamily 98.7 9.8E-09 3.4E-13 99.2 6.3 92 64-202 674-769 (780)
223 3h93_A Thiol:disulfide interch 98.7 1.5E-08 5E-13 81.4 5.2 130 64-201 24-185 (192)
224 3us3_A Calsequestrin-1; calciu 98.6 2.8E-07 9.6E-12 81.6 11.6 119 64-229 29-158 (367)
225 1eej_A Thiol:disulfide interch 98.5 5.8E-08 2E-12 79.7 5.1 44 59-106 80-123 (216)
226 2djk_A PDI, protein disulfide- 98.5 6.6E-08 2.3E-12 73.2 4.9 91 64-202 22-117 (133)
227 2znm_A Thiol:disulfide interch 98.5 1.9E-07 6.5E-12 74.8 6.4 129 63-201 20-181 (195)
228 3ga4_A Dolichyl-diphosphooligo 98.5 7.5E-07 2.6E-11 71.2 9.5 46 62-107 34-90 (178)
229 1ttz_A Conserved hypothetical 98.5 1.5E-07 5.1E-12 66.4 4.6 76 69-201 3-78 (87)
230 2e7p_A Glutaredoxin; thioredox 98.4 1.9E-07 6.6E-12 68.4 5.1 38 64-107 18-55 (116)
231 2rem_A Disulfide oxidoreductas 98.3 1.2E-06 4.2E-11 69.8 6.6 127 64-201 24-185 (193)
232 1a8l_A Protein disulfide oxido 98.3 2.4E-06 8.4E-11 69.6 8.5 93 62-200 19-113 (226)
233 2fgx_A Putative thioredoxin; N 98.3 2E-06 6.7E-11 63.0 6.7 38 67-107 30-67 (107)
234 2ywm_A Glutaredoxin-like prote 98.2 5.6E-06 1.9E-10 67.7 9.0 92 63-200 19-115 (229)
235 3hz8_A Thiol:disulfide interch 98.2 1.8E-06 6.2E-11 69.5 5.5 43 64-107 23-65 (193)
236 1v58_A Thiol:disulfide interch 98.2 3.3E-06 1.1E-10 70.4 7.1 135 58-200 90-233 (241)
237 1wjk_A C330018D20RIK protein; 98.1 2.6E-06 8.8E-11 61.3 4.6 38 65-107 15-52 (100)
238 4h86_A Peroxiredoxin type-2; o 98.1 1.1E-05 3.7E-10 65.2 8.7 137 29-183 16-179 (199)
239 1hyu_A AHPF, alkyl hydroperoxi 98.1 1E-05 3.5E-10 74.7 9.4 42 64-107 116-157 (521)
240 1t3b_A Thiol:disulfide interch 98.1 2.1E-06 7.2E-11 70.1 3.7 37 64-104 85-121 (211)
241 2k8s_A Thioredoxin; dimer, str 98.0 6.4E-06 2.2E-10 56.3 4.2 36 69-107 4-39 (80)
242 2c0g_A ERP29 homolog, windbeut 97.9 3.8E-05 1.3E-09 64.4 9.1 93 64-200 32-132 (248)
243 2qc7_A ERP31, ERP28, endoplasm 97.9 2.8E-05 9.5E-10 64.9 7.1 93 64-199 21-118 (240)
244 3feu_A Putative lipoprotein; a 97.9 6.6E-06 2.3E-10 65.8 3.2 39 65-106 22-60 (185)
245 3l9v_A Putative thiol-disulfid 97.9 1E-05 3.5E-10 64.8 4.1 43 64-107 13-58 (189)
246 2i3y_A Epididymal secretory gl 97.9 7.3E-06 2.5E-10 67.3 3.3 39 202-240 172-210 (215)
247 1ego_A Glutaredoxin; electron 97.8 5.7E-06 2E-10 56.8 2.2 37 69-107 3-39 (85)
248 3uem_A Protein disulfide-isome 97.8 7.2E-05 2.5E-09 65.3 8.5 95 66-202 136-232 (361)
249 2r37_A Glutathione peroxidase 97.7 1.8E-05 6E-10 64.5 2.9 38 202-239 154-191 (207)
250 4dvc_A Thiol:disulfide interch 97.7 3.2E-05 1.1E-09 60.7 4.2 41 64-105 20-60 (184)
251 3c7m_A Thiol:disulfide interch 97.5 9.5E-05 3.2E-09 58.6 5.4 43 64-107 16-59 (195)
252 2hls_A Protein disulfide oxido 97.5 0.00035 1.2E-08 58.0 8.1 43 65-107 25-73 (243)
253 3kp9_A Vkorc1/thioredoxin doma 97.4 1.9E-05 6.3E-10 67.8 -0.6 37 58-94 190-226 (291)
254 2lqo_A Putative glutaredoxin R 97.3 0.0022 7.4E-08 45.3 9.6 43 69-125 6-48 (92)
255 1un2_A DSBA, thiol-disulfide i 97.3 3.7E-05 1.2E-09 62.2 0.1 43 64-107 112-157 (197)
256 3l9s_A Thiol:disulfide interch 97.3 0.00018 6.1E-09 57.7 3.8 43 64-107 20-65 (191)
257 3gv1_A Disulfide interchange p 97.2 0.00041 1.4E-08 53.3 4.9 28 63-90 12-39 (147)
258 2p31_A CL683, glutathione pero 97.1 0.0003 1E-08 55.3 3.6 39 202-240 142-180 (181)
259 2f8a_A Glutathione peroxidase 97.1 0.00032 1.1E-08 56.9 3.5 37 203-239 169-205 (208)
260 1h75_A Glutaredoxin-like prote 97.1 0.00091 3.1E-08 45.1 5.3 32 69-107 3-34 (81)
261 3kij_A Probable glutathione pe 97.1 0.00028 9.7E-09 55.4 3.0 38 202-239 131-168 (180)
262 3dwv_A Glutathione peroxidase- 97.0 0.00029 1E-08 55.7 2.9 43 198-240 140-182 (187)
263 2ec4_A FAS-associated factor 1 97.0 0.0066 2.3E-07 48.1 10.3 111 62-200 52-168 (178)
264 1z6m_A Conserved hypothetical 96.9 0.0013 4.6E-08 51.1 5.9 50 58-107 20-70 (175)
265 3f4s_A Alpha-DSBA1, putative u 96.8 0.00073 2.5E-08 55.6 3.4 48 59-106 33-82 (226)
266 1r7h_A NRDH-redoxin; thioredox 96.8 0.0015 5.1E-08 43.1 4.2 32 69-107 3-34 (75)
267 3cmi_A Peroxiredoxin HYR1; thi 96.7 0.00092 3.2E-08 51.8 3.4 40 200-239 127-166 (171)
268 3gha_A Disulfide bond formatio 96.7 0.0043 1.5E-07 49.9 7.1 47 60-106 24-72 (202)
269 2vup_A Glutathione peroxidase- 96.6 0.00096 3.3E-08 52.8 2.7 39 201-239 145-183 (190)
270 2gs3_A PHGPX, GPX-4, phospholi 96.5 0.0022 7.4E-08 50.5 4.3 38 203-240 148-185 (185)
271 3c1r_A Glutaredoxin-1; oxidize 96.4 0.0029 9.9E-08 46.4 4.2 35 69-107 27-62 (118)
272 2cq9_A GLRX2 protein, glutared 96.4 0.006 2E-07 45.5 5.7 31 70-107 30-60 (130)
273 1kte_A Thioltransferase; redox 96.3 0.0018 6E-08 46.0 2.3 24 69-92 14-37 (105)
274 1fov_A Glutaredoxin 3, GRX3; a 96.3 0.0049 1.7E-07 41.3 4.5 32 69-107 3-34 (82)
275 4f9z_D Endoplasmic reticulum r 96.2 0.031 1.1E-06 45.3 9.6 94 67-202 133-227 (227)
276 2hze_A Glutaredoxin-1; thiored 96.1 0.0038 1.3E-07 45.3 3.5 23 67-89 19-41 (114)
277 2p5q_A Glutathione peroxidase 96.1 0.0039 1.3E-07 47.6 3.8 39 202-240 129-167 (170)
278 3bci_A Disulfide bond protein 96.1 0.0087 3E-07 47.0 5.8 44 63-106 9-54 (186)
279 3qmx_A Glutaredoxin A, glutare 96.0 0.012 4E-07 41.8 5.5 35 66-107 15-49 (99)
280 2khp_A Glutaredoxin; thioredox 96.0 0.009 3.1E-07 41.2 4.6 32 69-107 8-39 (92)
281 2ht9_A Glutaredoxin-2; thiored 95.9 0.0074 2.5E-07 46.1 4.4 22 69-90 51-72 (146)
282 2yan_A Glutaredoxin-3; oxidore 95.8 0.012 4.2E-07 41.8 4.9 33 67-107 18-55 (105)
283 2klx_A Glutaredoxin; thioredox 95.7 0.029 9.8E-07 38.4 6.4 30 69-105 8-37 (89)
284 2v1m_A Glutathione peroxidase; 95.7 0.0067 2.3E-07 46.2 3.4 37 203-239 129-165 (169)
285 2obi_A PHGPX, GPX-4, phospholi 95.7 0.0069 2.4E-07 47.3 3.3 38 203-240 146-183 (183)
286 3ic4_A Glutaredoxin (GRX-1); s 95.6 0.031 1.1E-06 38.3 6.2 22 69-90 14-35 (92)
287 3msz_A Glutaredoxin 1; alpha-b 95.3 0.011 3.8E-07 40.1 3.1 22 68-89 5-26 (89)
288 1wik_A Thioredoxin-like protei 95.2 0.045 1.5E-06 39.2 6.3 26 75-107 28-53 (109)
289 2ggt_A SCO1 protein homolog, m 95.2 0.0075 2.6E-07 45.7 2.0 36 204-239 124-159 (164)
290 3kzq_A Putative uncharacterize 95.1 0.044 1.5E-06 43.8 6.5 40 162-202 166-205 (208)
291 3ctg_A Glutaredoxin-2; reduced 95.1 0.02 6.9E-07 42.6 4.2 21 69-89 39-60 (129)
292 3nzn_A Glutaredoxin; structura 94.9 0.012 4E-07 41.8 2.2 23 68-90 23-45 (103)
293 3rhb_A ATGRXC5, glutaredoxin-C 94.5 0.013 4.4E-07 42.2 1.7 21 69-89 21-41 (113)
294 3h8q_A Thioredoxin reductase 3 94.0 0.054 1.9E-06 39.1 4.2 21 69-89 19-39 (114)
295 1lu4_A Soluble secreted antige 93.9 0.16 5.6E-06 36.5 6.7 31 209-240 102-135 (136)
296 2rli_A SCO2 protein homolog, m 93.8 0.027 9.3E-07 42.9 2.2 34 206-239 129-162 (171)
297 3gkn_A Bacterioferritin comigr 93.3 0.13 4.3E-06 38.9 5.2 31 207-238 125-159 (163)
298 2ct6_A SH3 domain-binding glut 93.0 0.48 1.6E-05 33.9 7.8 38 69-107 10-47 (111)
299 3lor_A Thiol-disulfide isomera 92.8 0.05 1.7E-06 40.8 2.4 31 209-239 123-153 (160)
300 1t1v_A SH3BGRL3, SH3 domain-bi 92.7 0.54 1.9E-05 32.2 7.5 32 69-107 4-41 (93)
301 2b7k_A SCO1 protein; metalloch 92.3 0.079 2.7E-06 41.9 3.0 34 205-238 143-176 (200)
302 3hcz_A Possible thiol-disulfid 92.2 0.28 9.5E-06 35.8 5.8 31 209-239 114-144 (148)
303 2l5o_A Putative thioredoxin; s 92.0 0.27 9.3E-06 36.3 5.5 33 207-239 107-139 (153)
304 2axo_A Hypothetical protein AT 91.9 3 0.0001 34.9 12.3 39 66-107 43-81 (270)
305 3gl3_A Putative thiol:disulfid 91.7 0.44 1.5E-05 35.0 6.5 51 169-239 88-140 (152)
306 1aba_A Glutaredoxin; electron 91.7 0.39 1.3E-05 32.4 5.7 32 69-107 2-37 (87)
307 3drn_A Peroxiredoxin, bacterio 91.6 0.25 8.7E-06 37.2 5.1 54 168-237 88-145 (161)
308 3eyt_A Uncharacterized protein 91.5 0.066 2.3E-06 40.0 1.6 31 209-239 120-150 (158)
309 3tdg_A DSBG, putative uncharac 91.3 0.11 3.9E-06 43.7 3.0 40 64-106 146-185 (273)
310 2yzh_A Probable thiol peroxida 91.2 0.14 4.9E-06 39.1 3.3 60 169-240 106-171 (171)
311 2cvb_A Probable thiol-disulfid 91.2 0.31 1.1E-05 37.6 5.3 49 170-238 100-156 (188)
312 1zzo_A RV1677; thioredoxin fol 91.2 0.51 1.8E-05 33.6 6.2 31 209-240 104-134 (136)
313 2in3_A Hypothetical protein; D 91.2 0.57 2E-05 37.0 7.0 39 162-201 173-211 (216)
314 4evm_A Thioredoxin family prot 91.1 0.12 4.1E-06 37.0 2.6 49 170-238 88-136 (138)
315 3erw_A Sporulation thiol-disul 90.9 0.4 1.4E-05 34.7 5.4 48 170-237 98-145 (145)
316 3lwa_A Secreted thiol-disulfid 90.8 0.16 5.3E-06 39.2 3.2 53 170-239 127-179 (183)
317 3kh7_A Thiol:disulfide interch 90.8 0.086 2.9E-06 40.7 1.7 49 170-238 116-164 (176)
318 1z3e_A Regulatory protein SPX; 90.8 0.5 1.7E-05 35.0 5.9 52 69-131 3-54 (132)
319 2f9s_A Thiol-disulfide oxidore 90.6 0.11 3.9E-06 38.4 2.2 31 209-239 106-136 (151)
320 3kcm_A Thioredoxin family prot 90.3 0.62 2.1E-05 34.3 6.1 49 170-238 90-140 (154)
321 2b5x_A YKUV protein, TRXY; thi 90.2 0.13 4.3E-06 37.6 2.1 50 170-239 94-143 (148)
322 3l78_A Regulatory protein SPX; 90.2 0.54 1.8E-05 34.3 5.5 52 69-131 2-53 (120)
323 1sji_A Calsequestrin 2, calseq 90.0 0.95 3.2E-05 38.8 7.9 41 66-106 246-287 (350)
324 4eo3_A Bacterioferritin comigr 90.0 0.12 4.2E-06 44.5 2.1 55 167-238 78-136 (322)
325 1xzo_A BSSCO, hypothetical pro 89.9 0.21 7.1E-06 37.9 3.2 37 204-240 133-171 (174)
326 2h30_A Thioredoxin, peptide me 89.9 0.19 6.5E-06 37.6 2.9 31 209-239 124-154 (164)
327 2ywi_A Hypothetical conserved 89.4 0.11 3.8E-06 40.4 1.2 30 209-238 133-171 (196)
328 3us3_A Calsequestrin-1; calciu 89.2 0.91 3.1E-05 39.4 7.1 99 66-204 248-352 (367)
329 4hde_A SCO1/SENC family lipopr 89.2 0.19 6.4E-06 38.7 2.4 31 209-239 136-168 (170)
330 4g2e_A Peroxiredoxin; redox pr 89.1 0.26 8.8E-06 37.3 3.1 62 168-238 89-155 (157)
331 3u5r_E Uncharacterized protein 89.0 0.34 1.2E-05 38.7 4.0 50 170-239 127-185 (218)
332 3l4n_A Monothiol glutaredoxin- 88.9 0.79 2.7E-05 33.8 5.6 48 69-125 16-63 (127)
333 1we0_A Alkyl hydroperoxide red 88.8 0.15 5.1E-06 39.6 1.6 30 209-238 121-154 (187)
334 2wci_A Glutaredoxin-4; redox-a 88.7 0.32 1.1E-05 36.4 3.3 34 67-107 36-73 (135)
335 3me7_A Putative uncharacterize 88.6 0.28 9.5E-06 37.6 3.0 35 204-238 124-159 (170)
336 3fw2_A Thiol-disulfide oxidore 88.6 0.66 2.3E-05 34.2 5.1 27 209-238 119-145 (150)
337 1psq_A Probable thiol peroxida 88.6 0.32 1.1E-05 36.8 3.3 55 170-238 102-162 (163)
338 2i81_A 2-Cys peroxiredoxin; st 88.5 0.18 6.2E-06 40.4 2.0 57 167-238 117-177 (213)
339 2jsy_A Probable thiol peroxida 88.4 0.26 8.9E-06 37.2 2.7 31 209-239 130-165 (167)
340 4gqc_A Thiol peroxidase, perox 88.3 0.31 1E-05 37.3 3.1 62 167-238 91-157 (164)
341 1xvq_A Thiol peroxidase; thior 88.1 0.4 1.4E-05 36.8 3.7 60 168-238 101-165 (175)
342 2lrt_A Uncharacterized protein 88.0 0.28 9.5E-06 36.7 2.6 27 209-235 116-142 (152)
343 1rw1_A Conserved hypothetical 88.0 0.37 1.3E-05 34.8 3.2 50 69-129 2-51 (114)
344 2b1k_A Thiol:disulfide interch 88.0 0.17 6E-06 38.2 1.5 30 209-238 128-157 (168)
345 3p7x_A Probable thiol peroxida 87.8 0.36 1.2E-05 36.6 3.2 30 209-238 131-165 (166)
346 3fz4_A Putative arsenate reduc 87.7 0.88 3E-05 33.2 5.1 53 68-131 4-56 (120)
347 3gn3_A Putative protein-disulf 87.3 0.44 1.5E-05 37.3 3.5 41 64-105 13-54 (182)
348 2bmx_A Alkyl hydroperoxidase C 87.1 0.18 6E-06 39.6 1.0 30 209-238 134-167 (195)
349 2lja_A Putative thiol-disulfid 87.1 0.25 8.5E-06 36.5 1.8 31 209-239 111-141 (152)
350 1kng_A Thiol:disulfide interch 86.9 0.27 9.3E-06 36.3 2.0 30 209-238 120-149 (156)
351 3ia1_A THIO-disulfide isomeras 86.8 0.38 1.3E-05 35.6 2.7 32 209-240 112-143 (154)
352 3ztl_A Thioredoxin peroxidase; 86.3 0.25 8.4E-06 39.8 1.5 56 168-237 135-194 (222)
353 1zof_A Alkyl hydroperoxide-red 86.1 0.17 5.8E-06 39.7 0.4 56 168-238 99-158 (198)
354 3raz_A Thioredoxin-related pro 86.1 0.52 1.8E-05 34.8 3.2 30 209-238 108-137 (151)
355 2kok_A Arsenate reductase; bru 85.8 0.57 2E-05 34.0 3.2 50 69-129 7-56 (120)
356 3ixr_A Bacterioferritin comigr 85.7 0.51 1.7E-05 36.4 3.0 60 170-238 112-175 (179)
357 2lrn_A Thiol:disulfide interch 85.6 0.94 3.2E-05 33.4 4.5 27 209-238 112-138 (152)
358 2l4c_A Endoplasmic reticulum r 85.5 7.7 0.00026 28.1 9.3 35 65-104 39-73 (124)
359 1uul_A Tryparedoxin peroxidase 85.3 0.31 1E-05 38.4 1.6 57 168-238 102-162 (202)
360 2h8l_A Protein disulfide-isome 85.0 5.7 0.0002 32.1 9.4 96 65-202 129-232 (252)
361 1zye_A Thioredoxin-dependent p 84.9 0.4 1.4E-05 38.5 2.2 58 167-238 121-182 (220)
362 2h01_A 2-Cys peroxiredoxin; th 84.9 0.34 1.2E-05 37.7 1.7 57 167-238 96-156 (192)
363 3fkf_A Thiol-disulfide oxidore 84.9 2.2 7.6E-05 30.7 6.2 29 209-240 117-145 (148)
364 3gx8_A Monothiol glutaredoxin- 84.8 2.4 8.2E-05 30.7 6.2 16 75-90 29-44 (121)
365 3zyw_A Glutaredoxin-3; metal b 84.8 1 3.6E-05 32.1 4.2 26 75-107 29-54 (111)
366 3gmf_A Protein-disulfide isome 84.7 1.3 4.4E-05 35.3 5.1 48 59-106 9-58 (205)
367 3gkx_A Putative ARSC family re 84.5 1.2 4.2E-05 32.4 4.5 52 69-131 6-57 (120)
368 2c0d_A Thioredoxin peroxidase 84.4 0.38 1.3E-05 38.8 1.8 56 168-238 122-181 (221)
369 3or5_A Thiol:disulfide interch 83.9 0.56 1.9E-05 34.9 2.5 33 207-239 117-149 (165)
370 3sbc_A Peroxiredoxin TSA1; alp 83.8 0.44 1.5E-05 38.7 1.9 59 166-238 116-178 (216)
371 3qpm_A Peroxiredoxin; oxidored 83.8 0.34 1.2E-05 39.7 1.3 57 168-238 143-203 (240)
372 3hdc_A Thioredoxin family prot 83.4 0.84 2.9E-05 34.0 3.3 51 168-238 97-149 (158)
373 1jfu_A Thiol:disulfide interch 83.4 0.6 2E-05 35.8 2.5 31 209-239 146-178 (186)
374 3tue_A Tryparedoxin peroxidase 83.1 0.4 1.4E-05 39.0 1.4 58 167-238 121-182 (219)
375 2k6v_A Putative cytochrome C o 82.3 0.34 1.2E-05 36.5 0.6 35 205-240 136-172 (172)
376 1s3c_A Arsenate reductase; ARS 81.9 1.5 5.2E-05 32.9 4.2 51 69-130 4-54 (141)
377 1u6t_A SH3 domain-binding glut 81.7 5.9 0.0002 28.9 7.2 51 69-127 2-52 (121)
378 3ipz_A Monothiol glutaredoxin- 81.5 1.5 5E-05 31.1 3.8 26 75-107 31-56 (109)
379 2wem_A Glutaredoxin-related pr 81.4 1.6 5.4E-05 31.7 4.0 14 76-89 34-47 (118)
380 3keb_A Probable thiol peroxida 81.0 1.2 4.2E-05 36.2 3.6 60 168-238 108-173 (224)
381 3rdw_A Putative arsenate reduc 80.5 2.1 7E-05 31.2 4.4 50 69-129 7-56 (121)
382 1n8j_A AHPC, alkyl hydroperoxi 80.3 0.91 3.1E-05 35.2 2.5 57 168-238 93-153 (186)
383 3ewl_A Uncharacterized conserv 80.2 1.3 4.6E-05 31.9 3.3 27 209-238 112-138 (142)
384 1q98_A Thiol peroxidase, TPX; 80.0 1.5 5.2E-05 33.0 3.7 19 206-224 129-147 (165)
385 2hyx_A Protein DIPZ; thioredox 79.6 0.53 1.8E-05 41.0 1.0 33 207-239 165-197 (352)
386 3ha9_A Uncharacterized thiored 79.6 3.5 0.00012 30.5 5.7 30 209-239 133-162 (165)
387 1xvw_A Hypothetical protein RV 78.6 1.2 4.2E-05 33.0 2.7 30 209-238 124-157 (160)
388 1qmv_A Human thioredoxin perox 78.2 0.77 2.7E-05 35.8 1.5 56 169-238 101-160 (197)
389 3zrd_A Thiol peroxidase; oxido 76.6 1.7 5.7E-05 34.2 3.1 46 168-224 136-182 (200)
390 3bj5_A Protein disulfide-isome 76.5 21 0.00071 26.4 9.1 81 79-202 46-129 (147)
391 3q6o_A Sulfhydryl oxidase 1; p 75.1 10 0.00034 30.3 7.5 39 162-200 202-240 (244)
392 3a2v_A Probable peroxiredoxin; 74.9 1.2 4.1E-05 36.8 1.8 56 170-238 100-159 (249)
393 1tp9_A Peroxiredoxin, PRX D (t 73.9 1.7 5.9E-05 32.7 2.4 49 168-226 98-146 (162)
394 2pn8_A Peroxiredoxin-4; thiore 73.6 2.2 7.4E-05 33.9 3.0 56 169-238 115-174 (211)
395 3ec3_A Protein disulfide-isome 72.0 7.3 0.00025 31.5 6.0 35 167-202 195-230 (250)
396 1nm3_A Protein HI0572; hybrid, 69.6 4.2 0.00014 32.6 3.9 24 66-89 169-192 (241)
397 2ls5_A Uncharacterized protein 72.3 0.97 3.3E-05 33.5 0.0 27 209-236 117-143 (159)
398 3mng_A Peroxiredoxin-5, mitoch 68.9 2.4 8.1E-05 32.7 2.2 50 168-225 106-155 (173)
399 2lus_A Thioredoxion; CR-Trp16, 70.6 1.1 3.9E-05 32.3 0.0 21 209-229 111-131 (143)
400 3f0i_A Arsenate reductase; str 67.0 3.3 0.00011 30.0 2.5 51 69-130 6-56 (119)
401 2g2q_A Glutaredoxin-2; thiored 66.8 0.64 2.2E-05 33.8 -1.4 30 66-95 2-31 (124)
402 2ju5_A Thioredoxin disulfide i 66.6 3.2 0.00011 30.8 2.5 30 209-239 119-150 (154)
403 3tjj_A Peroxiredoxin-4; thiore 66.0 3 0.0001 34.3 2.4 57 168-238 157-217 (254)
404 4fo5_A Thioredoxin-like protei 65.9 1.4 4.7E-05 32.1 0.2 28 207-237 114-141 (143)
405 1xcc_A 1-Cys peroxiredoxin; un 65.8 3.6 0.00012 32.9 2.8 61 170-238 99-163 (220)
406 2jvx_A NF-kappa-B essential mo 65.8 0.74 2.5E-05 24.7 -0.9 21 76-96 5-25 (28)
407 2kuc_A Putative disulphide-iso 64.3 3.7 0.00013 29.0 2.4 31 209-239 89-119 (130)
408 2v2g_A Peroxiredoxin 6; oxidor 64.3 4 0.00014 33.1 2.8 58 170-238 98-162 (233)
409 1prx_A HORF6; peroxiredoxin, h 64.2 4.6 0.00016 32.4 3.1 58 170-238 102-166 (224)
410 2wfc_A Peroxiredoxin 5, PRDX5; 63.8 8.2 0.00028 29.2 4.4 45 169-223 95-139 (167)
411 2l57_A Uncharacterized protein 63.4 5.5 0.00019 28.0 3.2 31 209-239 85-115 (126)
412 2r2j_A Thioredoxin domain-cont 62.9 15 0.00052 31.6 6.5 40 65-105 236-276 (382)
413 1xwb_A Thioredoxin; dimerizati 61.9 4 0.00014 27.4 2.1 31 209-240 76-106 (106)
414 4dah_A Sporulation kinase D; a 61.8 7.1 0.00024 30.3 3.8 49 171-225 132-180 (217)
415 3eur_A Uncharacterized protein 61.4 4.7 0.00016 29.0 2.5 16 209-224 116-131 (142)
416 3f9u_A Putative exported cytoc 60.8 3.4 0.00012 31.1 1.6 30 209-238 133-163 (172)
417 1dby_A Chloroplast thioredoxin 59.4 6.5 0.00022 26.5 2.8 32 209-240 75-106 (107)
418 3ghf_A Septum site-determining 58.5 18 0.00061 26.1 5.2 54 63-130 45-98 (120)
419 4ev1_A Anabena TIC22; TIC22 fo 57.2 79 0.0027 25.9 12.3 58 43-107 12-86 (252)
420 2pu9_C TRX-F, thioredoxin F-ty 55.0 5.9 0.0002 27.1 2.0 29 210-239 81-109 (111)
421 2xc2_A Thioredoxinn; oxidoredu 54.1 6 0.00021 27.4 1.9 31 209-240 87-117 (117)
422 1fb6_A Thioredoxin M; electron 53.1 5.9 0.0002 26.5 1.7 32 209-240 74-105 (105)
423 1xfl_A Thioredoxin H1; AT3G510 52.8 6.6 0.00022 27.8 2.0 31 209-240 93-123 (124)
424 2vim_A Thioredoxin, TRX; thior 51.9 7 0.00024 26.0 1.9 31 209-240 74-104 (104)
425 2a4v_A Peroxiredoxin DOT5; yea 51.3 2.2 7.6E-05 31.7 -0.9 55 169-238 94-151 (159)
426 1faa_A Thioredoxin F; electron 50.9 7.3 0.00025 27.2 1.9 30 209-239 93-122 (124)
427 3gl5_A Putative DSBA oxidoredu 50.6 16 0.00055 29.4 4.2 79 115-202 135-215 (239)
428 3gmf_A Protein-disulfide isome 49.7 11 0.00038 29.7 3.0 36 162-203 165-200 (205)
429 3zzx_A Thioredoxin; oxidoreduc 48.7 8 0.00027 26.8 1.8 30 209-239 75-104 (105)
430 1t00_A Thioredoxin, TRX; redox 47.8 6.6 0.00022 26.8 1.3 31 209-239 79-109 (112)
431 2fwh_A Thiol:disulfide interch 47.6 10 0.00035 27.1 2.4 30 209-238 94-125 (134)
432 1syr_A Thioredoxin; SGPP, stru 47.5 9.4 0.00032 26.1 2.1 31 209-240 81-111 (112)
433 1ep7_A Thioredoxin CH1, H-type 47.4 6.6 0.00023 26.7 1.2 30 209-239 80-109 (112)
434 3qfa_C Thioredoxin; protein-pr 45.3 14 0.00047 25.6 2.7 31 209-240 86-116 (116)
435 1xiy_A Peroxiredoxin, pfaop; a 44.3 12 0.0004 29.1 2.3 61 168-238 106-179 (182)
436 1ti3_A Thioredoxin H, PTTRXH1; 44.2 9.4 0.00032 25.9 1.6 29 210-239 82-110 (113)
437 5nul_A Flavodoxin; electron tr 41.9 24 0.00083 25.2 3.7 12 118-129 97-108 (138)
438 2i1u_A Thioredoxin, TRX, MPT46 41.3 12 0.00041 25.7 1.8 32 209-240 86-117 (121)
439 1r26_A Thioredoxin; redox-acti 40.9 9.4 0.00032 27.1 1.2 30 209-239 92-121 (125)
440 2vlu_A Thioredoxin, thioredoxi 40.7 9.7 0.00033 26.4 1.2 30 209-239 89-118 (122)
441 2jad_A Yellow fluorescent prot 40.5 8.2 0.00028 33.6 0.9 17 69-85 263-279 (362)
442 3lif_A Putative diguanylate cy 39.3 38 0.0013 26.6 4.8 49 171-223 134-182 (254)
443 4euy_A Uncharacterized protein 38.5 17 0.00059 24.4 2.2 31 210-240 74-104 (105)
444 3die_A Thioredoxin, TRX; elect 37.4 18 0.00062 23.9 2.2 31 210-240 76-106 (106)
445 3f1p_B ARYL hydrocarbon recept 36.6 90 0.0031 20.5 6.3 52 169-220 15-88 (121)
446 3mjh_B Early endosome antigen 35.8 4.4 0.00015 22.7 -1.0 20 77-96 8-27 (34)
447 1sen_A Thioredoxin-like protei 35.7 13 0.00045 27.8 1.3 31 209-239 106-146 (164)
448 3vhs_A ATPase wrnip1; zinc fin 35.7 2 6.9E-05 22.3 -2.2 11 76-86 8-18 (29)
449 4e6z_A Apicoplast TIC22, putat 35.7 18 0.00063 30.2 2.3 58 43-107 75-136 (279)
450 1r4w_A Glutathione S-transfera 35.7 30 0.001 27.2 3.5 89 110-204 128-219 (226)
451 3fk8_A Disulphide isomerase; A 35.5 27 0.00093 24.4 3.0 30 209-238 94-130 (133)
452 1wmj_A Thioredoxin H-type; str 34.6 15 0.0005 25.6 1.4 30 210-240 92-121 (130)
453 3h4p_A Proteasome subunit alph 34.6 1.3E+02 0.0045 24.4 7.5 62 167-229 150-234 (264)
454 2l5l_A Thioredoxin; structural 34.3 19 0.00064 25.7 1.9 30 209-239 95-124 (136)
455 3hxs_A Thioredoxin, TRXP; elec 33.7 27 0.00092 24.7 2.8 31 209-240 108-138 (141)
456 2j23_A Thioredoxin; immune pro 33.6 20 0.00068 24.9 1.9 31 209-240 90-120 (121)
457 4f9z_D Endoplasmic reticulum r 33.5 1.5E+02 0.0051 23.0 7.4 35 65-104 27-61 (227)
458 2oe3_A Thioredoxin-3; electron 33.4 20 0.00068 24.7 1.9 29 209-238 85-113 (114)
459 1oaz_A Thioredoxin 1; immune s 33.0 22 0.00075 25.0 2.1 31 209-240 92-122 (123)
460 1mzu_A PPR; photoactive yellow 32.2 1.2E+02 0.004 22.1 6.0 53 168-222 34-110 (129)
461 2k49_A UPF0339 protein SO_3888 31.8 1.4E+02 0.0048 21.4 7.1 58 167-224 15-82 (118)
462 1j2q_H Proteasome beta subunit 31.7 71 0.0024 24.6 5.1 13 205-217 172-184 (202)
463 3f3q_A Thioredoxin-1; His TAG, 31.7 23 0.00078 24.1 2.0 30 210-240 80-109 (109)
464 1nwz_A PYP, photoactive yellow 31.6 1E+02 0.0035 22.2 5.6 53 168-222 29-105 (125)
465 3hz4_A Thioredoxin; NYSGXRC, P 31.5 18 0.0006 26.0 1.4 32 208-239 79-110 (140)
466 3d22_A TRXH4, thioredoxin H-ty 31.5 16 0.00056 25.9 1.2 30 209-239 101-130 (139)
467 1u07_A TONB protein; beta-hair 31.1 36 0.0012 22.6 2.9 32 207-238 27-63 (90)
468 3emx_A Thioredoxin; structural 30.4 25 0.00086 25.0 2.1 30 209-238 94-123 (135)
469 3tco_A Thioredoxin (TRXA-1); d 30.4 26 0.0009 23.2 2.1 31 210-240 78-108 (109)
470 3gl5_A Putative DSBA oxidoredu 30.3 1.6E+02 0.0055 23.3 7.2 43 65-107 1-46 (239)
471 2x8g_A Thioredoxin glutathione 30.0 21 0.00073 32.6 2.0 21 69-89 20-40 (598)
472 1iru_J 20S proteasome; cell cy 29.3 1.7E+02 0.0057 22.4 7.0 21 205-225 182-202 (205)
473 1w4v_A Thioredoxin, mitochondr 29.2 20 0.0007 24.7 1.4 30 210-239 88-117 (119)
474 3p2a_A Thioredoxin 2, putative 28.9 22 0.00075 25.6 1.5 31 209-239 111-141 (148)
475 3m9j_A Thioredoxin; oxidoreduc 28.7 28 0.00095 22.9 2.0 30 210-240 76-105 (105)
476 3lic_A Sensor protein; PDC fol 28.5 20 0.0007 28.5 1.4 41 175-223 156-196 (274)
477 1nsw_A Thioredoxin, TRX; therm 27.7 30 0.001 22.8 2.0 31 209-240 74-104 (105)
478 2i4a_A Thioredoxin; acidophIle 27.3 33 0.0011 22.6 2.2 30 210-240 78-107 (107)
479 4g6x_A Glyoxalase/bleomycin re 27.3 1.7E+02 0.0057 20.8 6.7 53 97-182 97-149 (155)
480 3hly_A Flavodoxin-like domain; 27.3 41 0.0014 25.0 2.9 17 115-131 96-112 (161)
481 1xhj_A Nitrogen fixation prote 27.0 55 0.0019 22.3 3.1 35 53-88 25-59 (88)
482 3rpp_A Glutathione S-transfera 26.9 58 0.002 25.9 3.9 85 115-202 133-217 (234)
483 2v2f_A Penicillin binding prot 26.5 35 0.0012 17.2 1.6 15 168-182 6-20 (26)
484 2jwk_A Protein TOLR; periplasm 25.8 1.2E+02 0.004 18.9 4.6 58 167-236 4-65 (74)
485 2k9k_A TONB2; metal transport; 25.8 43 0.0015 23.0 2.5 32 207-238 42-78 (106)
486 1k7c_A Rhamnogalacturonan acet 25.6 2.3E+02 0.0079 21.9 7.4 50 82-131 109-166 (233)
487 1iru_A 20S proteasome; cell cy 25.3 99 0.0034 24.7 5.1 58 167-224 149-231 (246)
488 3kz5_E Protein SOPB; partition 25.3 20 0.00069 21.8 0.6 22 218-239 22-43 (52)
489 1iru_H 20S proteasome; cell cy 25.1 1.1E+02 0.0038 23.5 5.2 24 205-228 171-194 (205)
490 1th5_A NIFU1; iron-sulfur clus 24.6 85 0.0029 20.5 3.7 39 53-92 22-61 (74)
491 4gxt_A A conserved functionall 24.5 3E+02 0.01 23.6 8.3 42 82-131 221-262 (385)
492 3i3w_A Phosphoglucosamine muta 24.5 2.9E+02 0.0098 24.2 8.3 38 97-134 195-237 (443)
493 3c8c_A Methyl-accepting chemot 24.5 1.4E+02 0.0046 22.5 5.6 51 171-225 126-177 (240)
494 1ryp_E 20S proteasome; multica 24.4 1.1E+02 0.0037 24.3 5.1 52 167-218 145-219 (242)
495 2pfu_A Biopolymer transport EX 24.1 1.2E+02 0.0042 20.0 4.7 57 167-236 21-77 (99)
496 2pr7_A Haloacid dehalogenase/e 24.1 74 0.0025 21.8 3.7 26 81-106 17-42 (137)
497 3u1w_A Hypothetical periplasmi 24.0 1.5E+02 0.0051 24.0 5.9 68 170-237 115-208 (253)
498 2obb_A Hypothetical protein; s 23.9 92 0.0031 22.9 4.2 44 86-134 28-71 (142)
499 1w63_Q Adapter-related protein 23.7 1.5E+02 0.005 22.1 5.4 68 168-237 4-85 (158)
500 3pdk_A Phosphoglucosamine muta 23.5 2.6E+02 0.009 24.7 7.9 38 97-134 217-259 (469)
No 1
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=100.00 E-value=6.1e-32 Score=214.00 Aligned_cols=164 Identities=52% Similarity=0.901 Sum_probs=142.3
Q ss_pred cccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCH
Q psy299 38 SWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDA 117 (240)
Q Consensus 38 ~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~ 117 (240)
....|.++|+|+++|.+|+.+++++++||++||+||++|||+|+.++|.|++++++|+++++.|++|++|.++.+++++.
T Consensus 4 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~ 83 (169)
T 2v1m_A 4 SHKSWNSIYEFTVKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAE 83 (169)
T ss_dssp ---CCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCH
T ss_pred cccCCcccccceeecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCH
Confidence 35689999999999999999999999999999999999999999999999999999999899999999997666777889
Q ss_pred HHHHHH-HHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHH
Q psy299 118 DQICEF-TKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIE 196 (240)
Q Consensus 118 e~~~~~-~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~ 196 (240)
+.+++| .++++++||++.+.|..+.....+++++.....+..+..++++|++||||++|+|+.++.+..++++|.+.|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 163 (169)
T 2v1m_A 84 AEIKKFVTEKYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIM 163 (169)
T ss_dssp HHHHHHHHHHHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHH
T ss_pred HHHHHHHHHhcCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHH
Confidence 999999 5999999999855577777777778777655443333347778999999999999999988888899999999
Q ss_pred Hhccc
Q psy299 197 ILGRT 201 (240)
Q Consensus 197 ~ll~~ 201 (240)
++|++
T Consensus 164 ~ll~~ 168 (169)
T 2v1m_A 164 ELLEK 168 (169)
T ss_dssp HHHHC
T ss_pred HHhcc
Confidence 99875
No 2
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.98 E-value=1.3e-31 Score=216.79 Aligned_cols=162 Identities=48% Similarity=0.829 Sum_probs=141.6
Q ss_pred cccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCH
Q psy299 38 SWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDA 117 (240)
Q Consensus 38 ~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~ 117 (240)
....|.++|+|+++|.+|+.+++++++||++||+||++|||+|+.++|.|++++++|+++++.|++|++|.+..+++++.
T Consensus 22 ~~~~g~~~p~f~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~ 101 (185)
T 2gs3_A 22 SMRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSN 101 (185)
T ss_dssp GGGGCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCH
T ss_pred hccCCCCcCCceeEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999997766777889
Q ss_pred HHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcC--CcccccccccceEEEEcCCCCeEEeccCCCCccchHHHH
Q psy299 118 DQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQG--GTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHI 195 (240)
Q Consensus 118 e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~--~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L 195 (240)
+.+++++++++++||++.+.|..+.....+++++..... +..+..++++|++||||++|+|+.++.+..++++|.+.|
T Consensus 102 ~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i 181 (185)
T 2gs3_A 102 EEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 181 (185)
T ss_dssp HHHHHHHHHTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGH
T ss_pred HHHHHHHHHcCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHH
Confidence 999999999999999996557777777667777654432 222224777899999999999999998888888999999
Q ss_pred HHhc
Q psy299 196 EILG 199 (240)
Q Consensus 196 ~~ll 199 (240)
+++|
T Consensus 182 ~~lL 185 (185)
T 2gs3_A 182 PHYF 185 (185)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 8875
No 3
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.98 E-value=1.5e-31 Score=222.38 Aligned_cols=162 Identities=39% Similarity=0.665 Sum_probs=142.3
Q ss_pred ccCCcccCCeEeecCC-CCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCH
Q psy299 39 WKNAETVYDFTVKNIK-GEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDA 117 (240)
Q Consensus 39 ~~~g~~~p~f~l~d~~-G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~ 117 (240)
...+..+|+|+++|.+ |+.++|++++||++||+|||+|||+|+ ++|.|++++++|+++|+.||+|++|.+..+++++.
T Consensus 29 ~~~~~~~pdF~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~ 107 (215)
T 2i3y_A 29 KDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDN 107 (215)
T ss_dssp CCCCCCGGGCEEEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCH
T ss_pred ccccCCcCCcEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCH
Confidence 3566789999999999 999999999999999999999999999 99999999999999999999999998877777889
Q ss_pred HHHHHHHH------hcCcceeeeEeeecCCCCCchHHHHHhhhcCC---c------------ccccccccceEEEEcCCC
Q psy299 118 DQICEFTK------KKNVQFDLFEKINVNGDNAHPLWKFLKHKQGG---T------------LVDAIKWNFTKFIVDKNG 176 (240)
Q Consensus 118 e~~~~~~~------~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~---~------------~~~~v~~~P~~~lID~~G 176 (240)
+.+++|++ +++++||++.+.|.++.....+|+++.....+ . ....++|.|++||||++|
T Consensus 108 ~~i~~f~~~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G 187 (215)
T 2i3y_A 108 KEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDG 187 (215)
T ss_dssp HHHHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTS
T ss_pred HHHHHHHHhccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCC
Confidence 99999999 99999999977777788777888877644221 0 013577889999999999
Q ss_pred CeEEeccCCCCccchHHHHHHhccc
Q psy299 177 VPVERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 177 ~Iv~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
+|+.++.+..++++|++.|+++|++
T Consensus 188 ~vv~~~~g~~~~~~l~~~I~~ll~~ 212 (215)
T 2i3y_A 188 IPVMRWSHRATVSSVKTDILAYLKQ 212 (215)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHGGG
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 9999998888888999999999976
No 4
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.98 E-value=1.5e-31 Score=212.01 Aligned_cols=164 Identities=52% Similarity=0.866 Sum_probs=138.6
Q ss_pred cccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCH
Q psy299 38 SWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDA 117 (240)
Q Consensus 38 ~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~ 117 (240)
...+|.++|+|+++|.+|+.+++++++||++||+||++|||+|+.++|.|++++++|+++++.|++|++|.+..++.++.
T Consensus 5 ~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~ 84 (170)
T 2p5q_A 5 TSKNPESVHDFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTN 84 (170)
T ss_dssp -----CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCH
T ss_pred cCCCCccccceEEEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCH
Confidence 45689999999999999999999999999999999999999999999999999999999899999999997777777899
Q ss_pred HHHHHHHH-hcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHH
Q psy299 118 DQICEFTK-KKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIE 196 (240)
Q Consensus 118 e~~~~~~~-~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~ 196 (240)
+.+++|++ +++++||++...|..+.....+++++.....+..+.++++.|++||||++|+|+.++.+..++++|.+.|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 164 (170)
T 2p5q_A 85 DQITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIK 164 (170)
T ss_dssp HHHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHH
T ss_pred HHHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHH
Confidence 99999999 79999999865677777777777766432221111356666799999999999999998888899999999
Q ss_pred Hhccc
Q psy299 197 ILGRT 201 (240)
Q Consensus 197 ~ll~~ 201 (240)
++|++
T Consensus 165 ~ll~~ 169 (170)
T 2p5q_A 165 QLLEI 169 (170)
T ss_dssp HHTTC
T ss_pred HHhhc
Confidence 99975
No 5
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.98 E-value=3e-32 Score=221.09 Aligned_cols=169 Identities=42% Similarity=0.759 Sum_probs=142.3
Q ss_pred cccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCC
Q psy299 36 DDSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPG 115 (240)
Q Consensus 36 ~~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~ 115 (240)
...+..+.++|+|+++|.+|+.+++++++||++||+||++|||+|+.++|.|++++++|+++++.||+|++|.+..++.+
T Consensus 17 ~~~~~~~~~~p~f~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~ 96 (187)
T 3dwv_A 17 RKKMSAASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPG 96 (187)
T ss_dssp ---CTTCCSGGGSCCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSS
T ss_pred hhhhcCCCccCCeEEEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCC
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999987778888
Q ss_pred CHHHHHHHHH-hcCcceeeeEeeecCCCCCchHHHHHhhhcCCccc-ccccccceEEEEcCCCCeEEeccCCCCccchHH
Q psy299 116 DADQICEFTK-KKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLV-DAIKWNFTKFIVDKNGVPVERHAANASPASLIP 193 (240)
Q Consensus 116 ~~e~~~~~~~-~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~-~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~ 193 (240)
+.+.+++|++ +++++||++.+.|..+.....++.++.....+..+ ..++|.+++||||++|+|+.++.+..+++.|.+
T Consensus 97 ~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~ 176 (187)
T 3dwv_A 97 NEEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEE 176 (187)
T ss_dssp BTTHHHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHH
T ss_pred CHHHHHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHH
Confidence 9999999999 46999999977788888888888888765533221 234444499999999999999999889999999
Q ss_pred HHHHhcccCCC
Q psy299 194 HIEILGRTSAI 204 (240)
Q Consensus 194 ~L~~ll~~~~i 204 (240)
.|+++|++.+|
T Consensus 177 ~i~~lL~~~~~ 187 (187)
T 3dwv_A 177 KLIPLLGSARL 187 (187)
T ss_dssp HHHHHC-----
T ss_pred HHHHHHhcCCC
Confidence 99999987643
No 6
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.98 E-value=2.9e-31 Score=219.45 Aligned_cols=162 Identities=39% Similarity=0.677 Sum_probs=140.8
Q ss_pred cCCcccCCeEeecCC-CCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHH
Q psy299 40 KNAETVYDFTVKNIK-GEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDAD 118 (240)
Q Consensus 40 ~~g~~~p~f~l~d~~-G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e 118 (240)
..+.++|+|+++|.+ |+.++|++++||++||+|||+|||+|+.++|.|++++++|+++|+.||+|++|.+..+++++.+
T Consensus 21 ~~~~~~p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~ 100 (208)
T 2f8a_A 21 QSMQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNE 100 (208)
T ss_dssp -CCCCGGGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHH
T ss_pred hhcCccCceEeeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCCHH
Confidence 467889999999999 9999999999999999999999999999999999999999999999999999877666777899
Q ss_pred HHHHHHH------hcCcceeeeEeeecCCCCCchHHHHHhhhcCCc-------------------ccccccccceEEEEc
Q psy299 119 QICEFTK------KKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGT-------------------LVDAIKWNFTKFIVD 173 (240)
Q Consensus 119 ~~~~~~~------~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~-------------------~~~~v~~~P~~~lID 173 (240)
.+++|++ +++++||++.+.+.++.....++.+++....+. ....+.++|++||||
T Consensus 101 ~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID 180 (208)
T 2f8a_A 101 EILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVG 180 (208)
T ss_dssp HHHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEEC
T ss_pred HHHHHHHhcccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEc
Confidence 9999998 899999999777777887777888776433210 012478889999999
Q ss_pred CCCCeEEeccCCCCccchHHHHHHhccc
Q psy299 174 KNGVPVERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 174 ~~G~Iv~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
++|+|+.++.+..++++|.+.|+++|++
T Consensus 181 ~~G~i~~~~~g~~~~~~l~~~I~~ll~~ 208 (208)
T 2f8a_A 181 PDGVPLRRYSRRFQTIDIEPDIEALLSQ 208 (208)
T ss_dssp TTSCEEEEECTTSCGGGGHHHHHHHHC-
T ss_pred CCCcEEEEeCCCCCHHHHHHHHHHHhhC
Confidence 9999999999888899999999999863
No 7
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.97 E-value=2.1e-31 Score=215.05 Aligned_cols=168 Identities=47% Similarity=0.861 Sum_probs=141.4
Q ss_pred cccccccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCC
Q psy299 32 TSMADDSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGG 111 (240)
Q Consensus 32 ~~~~~~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~ 111 (240)
.......+.+|+++|+|+++|.+|+.+++++++||++||+||++|||+|+.++|.|++++++|+++++.|++|++|.+..
T Consensus 14 ~~~~~~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~ 93 (183)
T 2obi_A 14 CCASRDDWRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGK 93 (183)
T ss_dssp -----CCGGGCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTT
T ss_pred hhhcccCCcccCcccceEEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCC
Confidence 34455567899999999999999999999999999999999999999999999999999999999899999999997767
Q ss_pred CCCCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcC--CcccccccccceEEEEcCCCCeEEeccCCCCcc
Q psy299 112 QEPGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQG--GTLVDAIKWNFTKFIVDKNGVPVERHAANASPA 189 (240)
Q Consensus 112 ~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~--~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~ 189 (240)
+++++.+.+++|+++++++||++.+.|..+.....+++++..... +..+..+.++|++||||++|+|+.++.+..+++
T Consensus 94 ~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~ 173 (183)
T 2obi_A 94 QEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPL 173 (183)
T ss_dssp CCCSCHHHHHHHHHTTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTH
T ss_pred CCCCCHHHHHHHHHHcCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHH
Confidence 777899999999999999999995557777777777877765432 222224777899999999999999998888887
Q ss_pred chHHHHHHhc
Q psy299 190 SLIPHIEILG 199 (240)
Q Consensus 190 ~l~~~L~~ll 199 (240)
+|.+.|+++|
T Consensus 174 ~l~~~i~~lL 183 (183)
T 2obi_A 174 VIEKDLPHYF 183 (183)
T ss_dssp HHHTTSGGGC
T ss_pred HHHHHHHHhC
Confidence 7887777664
No 8
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.97 E-value=5.2e-31 Score=212.29 Aligned_cols=160 Identities=36% Similarity=0.648 Sum_probs=138.5
Q ss_pred cccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCH
Q psy299 38 SWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDA 117 (240)
Q Consensus 38 ~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~ 117 (240)
....|.++|+|+++|.+|+.+++++++||++||+||++|||+|+.++|.|++++++|+++++.||+|++|.+...+.++.
T Consensus 11 ~~~~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~ 90 (180)
T 3kij_A 11 LKPKINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPS 90 (180)
T ss_dssp CCCCCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCH
T ss_pred hcCCcCcccceEEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCH
Confidence 34689999999999999999999999999999999999999999999999999999999999999999998777778899
Q ss_pred HHHHHHHHh-cCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHH
Q psy299 118 DQICEFTKK-KNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIE 196 (240)
Q Consensus 118 e~~~~~~~~-~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~ 196 (240)
+.+++|+++ ++++||++.+.+..+.....++.++....++ ...|++++||||++|+|+.++.+..+++.+.+.|+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~----~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 166 (180)
T 3kij_A 91 KEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKK----EPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIA 166 (180)
T ss_dssp HHHHHHHHHHHCCCSCBBCCCCCSSTTCCHHHHHHHHHHTC----CCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHH
T ss_pred HHHHHHHHHhcCCCCceeeeeeccCccccHHHHHHHhcCCC----CccccceEEEECCCCCEEEEECCCCCHHHHHHHHH
Confidence 999999999 9999999876677777777777776543221 22233349999999999999999888888888888
Q ss_pred Hhccc
Q psy299 197 ILGRT 201 (240)
Q Consensus 197 ~ll~~ 201 (240)
++|+.
T Consensus 167 ~lL~~ 171 (180)
T 3kij_A 167 ALVRQ 171 (180)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88754
No 9
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.97 E-value=6.5e-31 Score=217.31 Aligned_cols=162 Identities=37% Similarity=0.616 Sum_probs=138.9
Q ss_pred cCCcccCCeEeecCC-CCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHH
Q psy299 40 KNAETVYDFTVKNIK-GEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDAD 118 (240)
Q Consensus 40 ~~g~~~p~f~l~d~~-G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e 118 (240)
.....+|+|+++|.+ |+.++|++++||++||+|||+|||+| .++|.|++++++|+++|+.||+|++|.+..+++++.+
T Consensus 12 ~~~~~~pdF~l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~ 90 (207)
T 2r37_A 12 GISGTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENS 90 (207)
T ss_dssp ---CCGGGCEEEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHH
T ss_pred cccCccCCeEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHH
Confidence 455689999999999 99999999999999999999999999 7999999999999999999999999987777778899
Q ss_pred HHHHHHH------hcCcceeeeEeeecCCCCCchHHHHHhhhcCC---c------------ccccccccceEEEEcCCCC
Q psy299 119 QICEFTK------KKNVQFDLFEKINVNGDNAHPLWKFLKHKQGG---T------------LVDAIKWNFTKFIVDKNGV 177 (240)
Q Consensus 119 ~~~~~~~------~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~---~------------~~~~v~~~P~~~lID~~G~ 177 (240)
.+++|++ +++++||++.+.|.++.....+|.++.....+ . ....+.|.|++||||++|+
T Consensus 91 ~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~ 170 (207)
T 2r37_A 91 EILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGI 170 (207)
T ss_dssp HHHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSC
T ss_pred HHHHHHHhcchhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCc
Confidence 9999999 99999999977777788777788877543221 0 0124677899999999999
Q ss_pred eEEeccCCCCccchHHHHHHhcccC
Q psy299 178 PVERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 178 Iv~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
|+.++.+..++++|.+.|+++|++.
T Consensus 171 i~~~~~g~~~~~~l~~~I~~ll~~~ 195 (207)
T 2r37_A 171 PIMRWHHRTTVSNVKMDILSYMRRQ 195 (207)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHhhc
Confidence 9999988888889999999998653
No 10
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.97 E-value=1.9e-30 Score=210.80 Aligned_cols=167 Identities=43% Similarity=0.791 Sum_probs=140.5
Q ss_pred cccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCC
Q psy299 36 DDSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPG 115 (240)
Q Consensus 36 ~~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~ 115 (240)
...+..|.++|+|+++|.+|+.+++++++||++||+||++|||+|+.++|.|++++++|+++++.||+|++|.+++++++
T Consensus 19 ~s~~~~~~~~p~f~l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~ 98 (190)
T 2vup_A 19 GSHMSAASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPG 98 (190)
T ss_dssp -----CCCSGGGSCCBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCS
T ss_pred cccCCCCCcccCeEEEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCC
Confidence 34567899999999999999999999999999999999999999999999999999999998999999999977777778
Q ss_pred CHHHHHHHH-HhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccc-cccccceEEEEcCCCCeEEeccCCCCccchHH
Q psy299 116 DADQICEFT-KKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVD-AIKWNFTKFIVDKNGVPVERHAANASPASLIP 193 (240)
Q Consensus 116 ~~e~~~~~~-~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~-~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~ 193 (240)
+++.+++|+ ++++++||++.+.|..+.....+++++.....+..+. .++|+|++||||++|+|+.++.+..++++|.+
T Consensus 99 ~~~~~~~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~ 178 (190)
T 2vup_A 99 NEEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEK 178 (190)
T ss_dssp CHHHHHHHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHH
T ss_pred CHHHHHHHHHHhcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHH
Confidence 999999999 8999999999655777777666777765443321111 23455599999999999999988888889999
Q ss_pred HHHHhcccC
Q psy299 194 HIEILGRTS 202 (240)
Q Consensus 194 ~L~~ll~~~ 202 (240)
.|+++|++.
T Consensus 179 ~i~~ll~~~ 187 (190)
T 2vup_A 179 KLIPLLEST 187 (190)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHhhc
Confidence 999999764
No 11
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.97 E-value=1.7e-30 Score=209.55 Aligned_cols=160 Identities=39% Similarity=0.747 Sum_probs=130.2
Q ss_pred ccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCC
Q psy299 37 DSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGD 116 (240)
Q Consensus 37 ~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~ 116 (240)
..+.+|.++|+|+++|.+|+.+++++++||++||+||++|||+|+.++|.|++++++|+++++.|++|++|.++.+++++
T Consensus 21 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~ 100 (181)
T 2p31_A 21 QSMQQEQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDS 100 (181)
T ss_dssp ------CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSC
T ss_pred CcCCcCCccCceEeecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCC
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999766667778
Q ss_pred HHHHHHHHHh-cCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHH
Q psy299 117 ADQICEFTKK-KNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHI 195 (240)
Q Consensus 117 ~e~~~~~~~~-~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L 195 (240)
.+.+++|+++ ++++||++.+.|..+.....++++...... ..+.|..++||||++|+|+.++.+..++++|.+.|
T Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~d~~g~~~~~~~~~~~~~~P----~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i 176 (181)
T 2p31_A 101 NKEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYLAQTSG----KEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQI 176 (181)
T ss_dssp HHHHHHHHHHHHCCCSCBBCCCCCSSTTSCHHHHHHHHHHS----CCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCceeEeecccCCccchhhhhhhhhcCC----CccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHH
Confidence 9999999999 999999996556667666656654321100 01111128999999999999998888888899999
Q ss_pred HHhcc
Q psy299 196 EILGR 200 (240)
Q Consensus 196 ~~ll~ 200 (240)
+++|+
T Consensus 177 ~~ll~ 181 (181)
T 2p31_A 177 TALVR 181 (181)
T ss_dssp HTTCC
T ss_pred HHHhC
Confidence 98874
No 12
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.8e-30 Score=203.46 Aligned_cols=156 Identities=41% Similarity=0.732 Sum_probs=119.6
Q ss_pred CCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHH
Q psy299 41 NAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQI 120 (240)
Q Consensus 41 ~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~ 120 (240)
-+..+|+|+++|.+|+.+++++++||++||+||++||++|+ ++|.|++++++|+++++.|++|++|.+..+++++.+.+
T Consensus 8 ~~~~~~~f~l~d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~ 86 (171)
T 3cmi_A 8 HMSEFYKLAPVDKKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEI 86 (171)
T ss_dssp --CGGGGCCCBBTTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC----------
T ss_pred chhheeeeEEEcCCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHH
Confidence 46789999999999999999999999999999999999999 99999999999999999999999987666666788999
Q ss_pred HHHH-HhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccc------eEEEEcCCCCeEEeccCCCCccchHH
Q psy299 121 CEFT-KKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNF------TKFIVDKNGVPVERHAANASPASLIP 193 (240)
Q Consensus 121 ~~~~-~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P------~~~lID~~G~Iv~~~~~~~~~~~l~~ 193 (240)
++|+ ++++++||++.+.|..+.....+++++..... ++..+| ++||||++|+|+.++.+..++++|.+
T Consensus 87 ~~~~~~~~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~-----~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~ 161 (171)
T 3cmi_A 87 AQFCQLNYGVTFPIMKKIDVNGGNEDPVYKFLKSQKS-----GMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSE 161 (171)
T ss_dssp --------CCCSCBBCCCBSSSTTBCHHHHHHHHHSC-----CSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHH
T ss_pred HHHHHhccCCCceEEeeccCCCccchHHHHHHHhccC-----CcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHH
Confidence 9999 99999999996556666666667776544322 344456 99999999999999988888999999
Q ss_pred HHHHhcccC
Q psy299 194 HIEILGRTS 202 (240)
Q Consensus 194 ~L~~ll~~~ 202 (240)
.|+++|+++
T Consensus 162 ~i~~ll~~~ 170 (171)
T 3cmi_A 162 TIEELLKEV 170 (171)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHHHhc
Confidence 999999864
No 13
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.96 E-value=1.6e-28 Score=192.38 Aligned_cols=150 Identities=19% Similarity=0.236 Sum_probs=127.9
Q ss_pred CCcccCCeEeecC--CCCcccCCCCCCcEEEEEEecCCCCCcHHH-HHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCH
Q psy299 41 NAETVYDFTVKNI--KGEDVPLSTYKGHVLVIVNVASRCGYTGKH-YKELVELDEKFRDRGLRILAFPCNQFGGQEPGDA 117 (240)
Q Consensus 41 ~g~~~p~f~l~d~--~G~~v~ls~~~gk~vlv~F~atwCp~C~~~-~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~ 117 (240)
.|.++|+|+++|. +|+.+++++++||++||+||++||++|+.+ +|.|++++++|+++++.+++|++| +...+.++.
T Consensus 2 ~g~~aP~f~l~~~~~~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~-~~~~~~~~~ 80 (158)
T 3eyt_A 2 NAMKAPELQIQQWFNSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTV-FEHHEAMTP 80 (158)
T ss_dssp CCEECCCCCEEEEESCSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC-CSCGGGSCH
T ss_pred CCCcCCCceehhhhcCCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEec-ccccccCCH
Confidence 6889999999994 899999999999999999999999999996 999999999999889999999987 233334689
Q ss_pred HHHHHHHHhcCcceeeeEeeecCCCCC-chHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHH
Q psy299 118 DQICEFTKKKNVQFDLFEKINVNGDNA-HPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIE 196 (240)
Q Consensus 118 e~~~~~~~~~~~~fp~~~~~d~~~~~~-~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~ 196 (240)
+.+++|+++++++||++ .|..+... ..+...+ ++.++|++||||++|+|+.++.+..+.++|.+.|+
T Consensus 81 ~~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 148 (158)
T 3eyt_A 81 ISLKAFLHEYRIKFPVG--VDQPGDGAMPRTMAAY----------QMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIA 148 (158)
T ss_dssp HHHHHHHHHTTCCSCEE--EECCCSSSSCHHHHHT----------TCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCceEE--EcCccchhhHHHHHHc----------CCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHH
Confidence 99999999999999998 44444211 1244443 56778999999999999999998888889999999
Q ss_pred HhcccCC
Q psy299 197 ILGRTSA 203 (240)
Q Consensus 197 ~ll~~~~ 203 (240)
++|++..
T Consensus 149 ~ll~~~~ 155 (158)
T 3eyt_A 149 TLLGEAA 155 (158)
T ss_dssp HHHTSCC
T ss_pred HHhccCC
Confidence 9998754
No 14
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.96 E-value=1.9e-28 Score=192.09 Aligned_cols=149 Identities=10% Similarity=0.177 Sum_probs=128.7
Q ss_pred CCcccCCeEeec-CCCCcccCCCCCCcEEEEEEecCCCCCcHHH-HHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHH
Q psy299 41 NAETVYDFTVKN-IKGEDVPLSTYKGHVLVIVNVASRCGYTGKH-YKELVELDEKFRDRGLRILAFPCNQFGGQEPGDAD 118 (240)
Q Consensus 41 ~g~~~p~f~l~d-~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~-~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e 118 (240)
.|.++|+|++++ .+|+.+++++++||++||+||++||++|+.+ +|.|++++++|+++++.+++|++| +..++.++.+
T Consensus 5 ~g~~~p~~~~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~-~~~~~~~~~~ 83 (160)
T 3lor_A 5 DNAPLLELDVQEWVNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSV-FEHHDVMTPE 83 (160)
T ss_dssp TTCCBCCCCEEEESSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC-CSCGGGSCHH
T ss_pred CCCcCCCcccccccCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEecc-ccccccCCHH
Confidence 789999999999 8999999999999999999999999999995 999999999999989999999987 3444457899
Q ss_pred HHHHHHHhcCcceeeeEeeecCCC--CCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHH
Q psy299 119 QICEFTKKKNVQFDLFEKINVNGD--NAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIE 196 (240)
Q Consensus 119 ~~~~~~~~~~~~fp~~~~~d~~~~--~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~ 196 (240)
.+++|+++++++||++ .|..+. ....+.+.+ ++..+|++||||++|+|+.++.+..+.+.|.+.|+
T Consensus 84 ~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 151 (160)
T 3lor_A 84 ALKVFIDEFGIKFPVA--VDMPREGQRIPSTMKKY----------RLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLG 151 (160)
T ss_dssp HHHHHHHHTTCCSCEE--EECCCTTCSSCHHHHHT----------TCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCcEE--ECCccccchhhhHHHhc----------ccCccceEEEECCCCcEEEEecCcCCHHHHHHHHH
Confidence 9999999999999998 444433 222244443 56778999999999999999999888889999999
Q ss_pred HhcccC
Q psy299 197 ILGRTS 202 (240)
Q Consensus 197 ~ll~~~ 202 (240)
++|++.
T Consensus 152 ~ll~~~ 157 (160)
T 3lor_A 152 SLLSET 157 (160)
T ss_dssp HHHTCC
T ss_pred HHHhcc
Confidence 999875
No 15
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=1e-27 Score=186.70 Aligned_cols=142 Identities=19% Similarity=0.219 Sum_probs=122.9
Q ss_pred ccccCCcccCCeEeecCCCCcccCC--CCCCcEEEEEEecCCCCC--cHHHHHHHHHHHHHH-hhcCcEEEEeecCCCCC
Q psy299 37 DSWKNAETVYDFTVKNIKGEDVPLS--TYKGHVLVIVNVASRCGY--TGKHYKELVELDEKF-RDRGLRILAFPCNQFGG 111 (240)
Q Consensus 37 ~~~~~g~~~p~f~l~d~~G~~v~ls--~~~gk~vlv~F~atwCp~--C~~~~~~L~~l~~~~-~~~~v~vi~Vs~D~~~~ 111 (240)
..+.+|.++|+|+++|.+|+.++++ +++||++||+||++||++ |+.++|.|++++++| +++++.+++|++|
T Consensus 3 ~~l~~G~~~p~f~l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d---- 78 (150)
T 3fw2_A 3 AKSEIGKYAPFFSLPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLD---- 78 (150)
T ss_dssp CTTSTTSBCCCCCEEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECC----
T ss_pred ccccCCCcCCccEeECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcC----
Confidence 4578999999999999999999999 999999999999999999 999999999999999 7778999999998
Q ss_pred CCCCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccch
Q psy299 112 QEPGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASL 191 (240)
Q Consensus 112 ~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l 191 (240)
++++.+++++++++++||++ .|..+.. ..+.+.+ ++..+|++||||++|+|+.++. +.+++
T Consensus 79 ---~~~~~~~~~~~~~~~~~~~~--~d~~~~~-~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~---~~~~l 139 (150)
T 3fw2_A 79 ---VDKQQWKDAIKRDTLDWEQV--CDFGGLN-SEVAKQY----------SIYKIPANILLSSDGKILAKNL---RGEEL 139 (150)
T ss_dssp ---SCHHHHHHHHHHTTCCSEEE--CCSCGGG-CHHHHHT----------TCCSSSEEEEECTTSBEEEESC---CHHHH
T ss_pred ---CCHHHHHHHHHHhCCCceEE--EcCcccc-hHHHHHc----------CCCccCeEEEECCCCEEEEccC---CHHHH
Confidence 47899999999999999998 3332222 2344443 5667899999999999999884 67779
Q ss_pred HHHHHHhccc
Q psy299 192 IPHIEILGRT 201 (240)
Q Consensus 192 ~~~L~~ll~~ 201 (240)
.+.|++++++
T Consensus 140 ~~~l~~ll~~ 149 (150)
T 3fw2_A 140 KKKIENIVEE 149 (150)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999988864
No 16
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.95 E-value=1e-27 Score=191.91 Aligned_cols=156 Identities=13% Similarity=0.201 Sum_probs=123.2
Q ss_pred ccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCC-CcHHHHHHHHHHHHHHhhc--CcEEEEeecCCCCCCCCC
Q psy299 39 WKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCG-YTGKHYKELVELDEKFRDR--GLRILAFPCNQFGGQEPG 115 (240)
Q Consensus 39 ~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp-~C~~~~~~L~~l~~~~~~~--~v~vi~Vs~D~~~~~~~~ 115 (240)
...|.++|+|+|+|.+|+.++|++++||++||+||+|||| +|+.+++.|.++++.+++. ++.+|+||+| +.+|
T Consensus 6 ~P~~~~~PdF~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD----p~~D 81 (170)
T 4hde_A 6 KPLNWDLETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD----PDLD 81 (170)
T ss_dssp SCCCBCCCCCEEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC----TTTC
T ss_pred cCCCCcCCCcEEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC----cccc
Confidence 3578999999999999999999999999999999999998 7999999999999999875 5899999999 6788
Q ss_pred CHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhc----CCcccccccccceEEEEcCCCCeEEeccCCC--Ccc
Q psy299 116 DADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQ----GGTLVDAIKWNFTKFIVDKNGVPVERHAANA--SPA 189 (240)
Q Consensus 116 ~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~----~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~--~~~ 189 (240)
+++.+++|+++++.+++.+ ....+.....+........ .....+.+.+.|++||||++|+|+.++.+.. +.+
T Consensus 82 tp~~l~~y~~~~~~~~~~~--~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~ 159 (170)
T 4hde_A 82 KPENLKAFIQKFTEDTSNW--NLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYE 159 (170)
T ss_dssp CHHHHHHHHTTTCSCCTTE--EEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHH
T ss_pred cHHHHHHHHHHcCCCCCCc--eecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHH
Confidence 9999999999999887655 2234443333333332221 1122235667789999999999999886533 346
Q ss_pred chHHHHHHhcc
Q psy299 190 SLIPHIEILGR 200 (240)
Q Consensus 190 ~l~~~L~~ll~ 200 (240)
+|.++|++|++
T Consensus 160 ~l~~~ik~Lle 170 (170)
T 4hde_A 160 DIIRDMKRLAE 170 (170)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 68899998874
No 17
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.95 E-value=9.4e-28 Score=199.35 Aligned_cols=154 Identities=14% Similarity=0.217 Sum_probs=130.9
Q ss_pred ccccccCCcccCCeEeecCCCCcccCCCCCCc-EEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCC
Q psy299 35 ADDSWKNAETVYDFTVKNIKGEDVPLSTYKGH-VLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQE 113 (240)
Q Consensus 35 ~~~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk-~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~ 113 (240)
....+.+|.++|+|+++|.+|+.+++++++|| ++||+||++|||+|+.++|.|++++++|+++++.||+|++|....++
T Consensus 28 ~~~~l~~G~~aP~f~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~ 107 (218)
T 3u5r_E 28 QSNSITLGTRAADFVLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFP 107 (218)
T ss_dssp ECCCCCTTCBCCCCCEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCG
T ss_pred cCCcCCCCCcCCCcEeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccc
Confidence 44577899999999999999999999999999 59999999999999999999999999999999999999998666656
Q ss_pred CCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccC---------
Q psy299 114 PGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAA--------- 184 (240)
Q Consensus 114 ~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~--------- 184 (240)
.++++.+++|+++++++||++ .|..+ .+.+.+ ++..+|++||||++|+|+++...
T Consensus 108 ~d~~~~~~~~~~~~~~~~~~l--~D~~~----~~~~~~----------~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~ 171 (218)
T 3u5r_E 108 EETLERVGAEVKAYGYGFPYL--KDASQ----SVAKAY----------GAACTPDFFLYDRERRLVYHGQFDDARPGNGK 171 (218)
T ss_dssp GGSHHHHHHHHHHHTCCSCEE--ECTTC----HHHHHH----------TCCEESEEEEECTTCBEEEEECSSSCCTTSCC
T ss_pred cCCHHHHHHHHHHhCCCccEE--ECCcc----HHHHHc----------CCCCCCeEEEECCCCcEEEecccccccccccc
Confidence 689999999999999999998 34222 333433 56667999999999999987532
Q ss_pred CCCccchHHHHHHhcccCCC
Q psy299 185 NASPASLIPHIEILGRTSAI 204 (240)
Q Consensus 185 ~~~~~~l~~~L~~ll~~~~i 204 (240)
..+.++|++.|++++++.++
T Consensus 172 ~~~~~~l~~~i~~ll~~~~~ 191 (218)
T 3u5r_E 172 DVTGADLRAAVDAVLKGKDV 191 (218)
T ss_dssp CCCCHHHHHHHHHHHTTCCC
T ss_pred ccCHHHHHHHHHHHHcCCCC
Confidence 23456799999999988754
No 18
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.95 E-value=8.4e-28 Score=185.78 Aligned_cols=137 Identities=12% Similarity=0.186 Sum_probs=109.5
Q ss_pred ccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCC
Q psy299 37 DSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGD 116 (240)
Q Consensus 37 ~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~ 116 (240)
..+.+|.++|+|++ +.+|+.+++++++||++||+||++||++|+.++|.|++++++|+++++.||+|++| .+
T Consensus 5 ~~l~~G~~~P~f~l-~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d-------~~ 76 (143)
T 4fo5_A 5 EGVNPGDLAPRIEF-LGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMD-------EK 76 (143)
T ss_dssp BSSSTTSBCCCCCC------CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECC-------SC
T ss_pred cccCCcccCCceEE-cCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEcc-------CC
Confidence 45789999999999 99999999999999999999999999999999999999999999889999999998 46
Q ss_pred HHHHHHHHHhcCcce-eeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHH
Q psy299 117 ADQICEFTKKKNVQF-DLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHI 195 (240)
Q Consensus 117 ~e~~~~~~~~~~~~f-p~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L 195 (240)
.+.+++++++++++| +.+ .|..+.. ..+.+.+ ++..+|++||||++|+|+.+.. ..+++.+.|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~--~d~~~~~-~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l 140 (143)
T 4fo5_A 77 ESIFTETVKIDKLDLSTQF--HEGLGKE-SELYKKY----------DLRKGFKNFLINDEGVIIAANV---TPEKLTEIL 140 (143)
T ss_dssp HHHHHHHHHHHTCCGGGEE--ECTTGGG-SHHHHHT----------TGGGCCCEEEECTTSBEEEESC---CHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCceee--ecccccc-hHHHHHc----------CCCCCCcEEEECCCCEEEEccC---CHHHHHHHH
Confidence 899999999999999 666 3333322 2333333 5667899999999999999864 345555555
Q ss_pred HH
Q psy299 196 EI 197 (240)
Q Consensus 196 ~~ 197 (240)
++
T Consensus 141 ~~ 142 (143)
T 4fo5_A 141 KA 142 (143)
T ss_dssp TC
T ss_pred Hh
Confidence 43
No 19
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.95 E-value=8e-27 Score=185.46 Aligned_cols=156 Identities=17% Similarity=0.244 Sum_probs=124.6
Q ss_pred cccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCC-CcHHHHHHHHHHHHHHhhcC--cEEEEeecCCCCCC
Q psy299 36 DDSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCG-YTGKHYKELVELDEKFRDRG--LRILAFPCNQFGGQ 112 (240)
Q Consensus 36 ~~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp-~C~~~~~~L~~l~~~~~~~~--v~vi~Vs~D~~~~~ 112 (240)
...+.+|..+|+|+++|.+|+.+++++++||++||+||++||+ +|+.+++.|+++++++++++ +.||+|++| +
T Consensus 4 ~~~l~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d----~ 79 (174)
T 1xzo_A 4 QIKDPLNYEVEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVD----P 79 (174)
T ss_dssp CCCSCCCEECCCCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESC----T
T ss_pred CCcCccccccCCcEEEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeC----C
Confidence 3457899999999999999999999999999999999999999 99999999999999999886 999999998 4
Q ss_pred CCCCHHHHHHHHHhcCcce---eeeEeeecCCCCCchHHHHHhhh-c-----CCcccccccccceEEEEcCCCCeEEecc
Q psy299 113 EPGDADQICEFTKKKNVQF---DLFEKINVNGDNAHPLWKFLKHK-Q-----GGTLVDAIKWNFTKFIVDKNGVPVERHA 183 (240)
Q Consensus 113 ~~~~~e~~~~~~~~~~~~f---p~~~~~d~~~~~~~~l~~~~~~~-~-----~~~~~~~v~~~P~~~lID~~G~Iv~~~~ 183 (240)
..++++.+++|+++++++| +++ .|.. ......+... . .......+.+.|++||||++|+|+.++.
T Consensus 80 ~~d~~~~~~~~~~~~~~~~~~~~~l--~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~ 153 (174)
T 1xzo_A 80 ENDKPKQLKKFAANYPLSFDNWDFL--TGYS----QSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYN 153 (174)
T ss_dssp TTCCHHHHHHHHTTSCCCGGGEEEE--BCSC----HHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEE
T ss_pred CCCCHHHHHHHHHHcCCCCcceEEE--eCCC----HHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEc
Confidence 4568999999999999999 555 2211 1222222210 0 0001124566799999999999999887
Q ss_pred CCC--CccchHHHHHHhccc
Q psy299 184 ANA--SPASLIPHIEILGRT 201 (240)
Q Consensus 184 ~~~--~~~~l~~~L~~ll~~ 201 (240)
+.. +.++|.+.|+++++.
T Consensus 154 g~~~~~~~~l~~~l~~ll~~ 173 (174)
T 1xzo_A 154 GVENTPYDDIISDVKSASTL 173 (174)
T ss_dssp SSSSCCHHHHHHHHHHHTCC
T ss_pred CCCCCCHHHHHHHHHHHHhc
Confidence 765 367799999999875
No 20
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.95 E-value=3.3e-28 Score=192.26 Aligned_cols=147 Identities=17% Similarity=0.175 Sum_probs=108.9
Q ss_pred cccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCC
Q psy299 38 SWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGD 116 (240)
Q Consensus 38 ~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~ 116 (240)
.+++|+++|+|+++|.+|+.++|++++||++||+|| ++|||+|+.++|.|+++++++++.++.+++||.| +
T Consensus 3 ~l~vG~~aPdF~l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d--------~ 74 (157)
T 4g2e_A 3 MVEIGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVD--------P 74 (157)
T ss_dssp CCCTTSBCCCCEEEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESS--------C
T ss_pred cCCCCCCCcCeEeECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeeccc--------c
Confidence 468999999999999999999999999999999999 9999999999999999999999999999999987 7
Q ss_pred HHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcC-CcccccccccceEEEEcCCCCeEEeccCCC-----Cccc
Q psy299 117 ADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQG-GTLVDAIKWNFTKFIVDKNGVPVERHAANA-----SPAS 190 (240)
Q Consensus 117 ~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~-~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~-----~~~~ 190 (240)
++.+++|+++++++||++ .|..+ .+.+.++.... ..........|++||||++|+|++++.+.. +.++
T Consensus 75 ~~~~~~~~~~~~~~~p~l--~D~~~----~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~e 148 (157)
T 4g2e_A 75 PFSNKAFKEHNKLNFTIL--SDYNR----EVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDE 148 (157)
T ss_dssp HHHHHHHHHHTTCCSEEE--ECTTS----HHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHH
T ss_pred hhHHHHHHHHcCCcEEEE--EcCCc----HHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHH
Confidence 899999999999999999 44433 33444432111 000111223578999999999998774322 2334
Q ss_pred hHHHHHHh
Q psy299 191 LIPHIEIL 198 (240)
Q Consensus 191 l~~~L~~l 198 (240)
+.+.|+.|
T Consensus 149 il~~l~~L 156 (157)
T 4g2e_A 149 IEKVVKSL 156 (157)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 55555543
No 21
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.95 E-value=3.3e-27 Score=189.85 Aligned_cols=145 Identities=13% Similarity=0.167 Sum_probs=124.7
Q ss_pred cccCCcccCCeEeecC--CCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCc------EEEEeecCCC
Q psy299 38 SWKNAETVYDFTVKNI--KGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGL------RILAFPCNQF 109 (240)
Q Consensus 38 ~~~~g~~~p~f~l~d~--~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v------~vi~Vs~D~~ 109 (240)
....|.++|+|++++. +|+.+++++++||++||+||++||++|+.++|.|++++++|+++++ .|++|++|.
T Consensus 30 ~~~~g~~~p~f~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~- 108 (183)
T 3lwa_A 30 DEADRQQLPDIGGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRD- 108 (183)
T ss_dssp CGGGCCCCCCCEEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSC-
T ss_pred ccccCCCCCceeccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCC-
Confidence 4578999999999999 9999999999999999999999999999999999999999999889 999999871
Q ss_pred CCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCcc
Q psy299 110 GGQEPGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPA 189 (240)
Q Consensus 110 ~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~ 189 (240)
++++.+++|+++++++||++ .|..+.... .++ ...+..+|++||||++|+|+.++.+..+.+
T Consensus 109 -----~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~----~~~-------~~~v~~~P~~~lid~~G~i~~~~~g~~~~~ 170 (183)
T 3lwa_A 109 -----YSRDIAQDFVTDNGLDYPSI--YDPPFMTAA----SLG-------GVPASVIPTTIVLDKQHRPAAVFLREVTSK 170 (183)
T ss_dssp -----CCHHHHHHHHHHTTCCSCEE--ECTTCGGGG----GTT-------TCCTTCCSEEEEECTTSCEEEEECSCCCHH
T ss_pred -----CCHHHHHHHHHHcCCCccEE--ECCcchHHH----Hhc-------cCCCCCCCeEEEECCCCcEEEEEcCCCCHH
Confidence 27999999999999999998 444443322 111 114666799999999999999998888888
Q ss_pred chHHHHHHhccc
Q psy299 190 SLIPHIEILGRT 201 (240)
Q Consensus 190 ~l~~~L~~ll~~ 201 (240)
+|.+.|+++|++
T Consensus 171 ~l~~~l~~ll~~ 182 (183)
T 3lwa_A 171 DVLDVALPLVDE 182 (183)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhc
Confidence 999999999865
No 22
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.94 E-value=2.1e-27 Score=182.83 Aligned_cols=137 Identities=18% Similarity=0.195 Sum_probs=114.1
Q ss_pred cCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHH---HHHHHhhcCcEEEEeecCCCCCCCCCC
Q psy299 40 KNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVE---LDEKFRDRGLRILAFPCNQFGGQEPGD 116 (240)
Q Consensus 40 ~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~---l~~~~~~~~v~vi~Vs~D~~~~~~~~~ 116 (240)
.+|.++|+|+++|.+|+.+++++++||++||+||++|||+|+.++|.|.+ ++++++++++.+++|++| ++
T Consensus 2 ~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d-------~~ 74 (142)
T 3ewl_A 2 NAGMKAADFTYVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPD-------EN 74 (142)
T ss_dssp CTTSBCCCCEEECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECS-------SC
T ss_pred CCCCcCCCCEEECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEec-------CC
Confidence 57999999999999999999999999999999999999999999999999 999999989999999988 58
Q ss_pred HHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHH
Q psy299 117 ADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIE 196 (240)
Q Consensus 117 ~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~ 196 (240)
.+.+++++++++++||++ .|..+. +.. . ...++.++|++||||++|+|+.+. .+.++|.+.|+
T Consensus 75 ~~~~~~~~~~~~~~~~~~--~d~~~~----~~~---~-----~~~~v~~~P~~~lid~~G~i~~~~---~~~~~l~~~l~ 137 (142)
T 3ewl_A 75 REEWATKAVYMPQGWIVG--WNKAGD----IRT---R-----QLYDIRATPTIYLLDGRKRVILKD---TSMEQLIDYLA 137 (142)
T ss_dssp HHHHHHHHTTSCTTCEEE--ECTTCH----HHH---T-----TCSCCCSSSEEEEECTTCBEEECS---CCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccee--eCCccc----hhh---H-----HHcCCCCCCeEEEECCCCCEEecC---CCHHHHHHHHH
Confidence 899999999999999998 443332 111 0 012577889999999999999843 55677887777
Q ss_pred Hhcc
Q psy299 197 ILGR 200 (240)
Q Consensus 197 ~ll~ 200 (240)
++.+
T Consensus 138 ~~~~ 141 (142)
T 3ewl_A 138 TQAG 141 (142)
T ss_dssp C---
T ss_pred HHcc
Confidence 6643
No 23
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.94 E-value=1.1e-26 Score=179.28 Aligned_cols=142 Identities=20% Similarity=0.249 Sum_probs=120.7
Q ss_pred ccccCCcccCCeEeecCCCCcccCC--CCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHH-hhcCcEEEEeecCCCCCCC
Q psy299 37 DSWKNAETVYDFTVKNIKGEDVPLS--TYKGHVLVIVNVASRCGYTGKHYKELVELDEKF-RDRGLRILAFPCNQFGGQE 113 (240)
Q Consensus 37 ~~~~~g~~~p~f~l~d~~G~~v~ls--~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~-~~~~v~vi~Vs~D~~~~~~ 113 (240)
..+.+|.++|+|++++.+|+.++++ +++||++||+||++||++|+.++|.|+++++++ +++++.+++|++|
T Consensus 3 ~~~~~g~~~p~~~l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d------ 76 (148)
T 3fkf_A 3 AKVTVGKSAPYFSLPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLD------ 76 (148)
T ss_dssp --CCTTSBCCCCCEEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECC------
T ss_pred ccccCCCcCCCeEeeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECC------
Confidence 4578999999999999999999999 999999999999999999999999999999999 8778999999988
Q ss_pred CCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHH
Q psy299 114 PGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIP 193 (240)
Q Consensus 114 ~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~ 193 (240)
.+.+.+++++++++++||++ .|..+.. ..+...+ ++..+|+++|||++|+|+.++. +.+.+.+
T Consensus 77 -~~~~~~~~~~~~~~~~~~~~--~d~~~~~-~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~---~~~~l~~ 139 (148)
T 3fkf_A 77 -IDREAWETAIKKDTLSWDQV--CDFTGLS-SETAKQY----------AILTLPTNILLSPTGKILARDI---QGEALTG 139 (148)
T ss_dssp -SCHHHHHHHHHHTTCCSEEE--CCSCGGG-CHHHHHT----------TCCSSSEEEEECTTSBEEEESC---CHHHHHH
T ss_pred -CCHHHHHHHHHHcCCCceEE--EccCCcc-hHHHHhc----------CCCCcCEEEEECCCCeEEEecC---CHHHHHH
Confidence 46899999999999999998 3332212 2344433 5677899999999999999886 6777999
Q ss_pred HHHHhccc
Q psy299 194 HIEILGRT 201 (240)
Q Consensus 194 ~L~~ll~~ 201 (240)
.|+++|++
T Consensus 140 ~l~~ll~~ 147 (148)
T 3fkf_A 140 KLKELLKT 147 (148)
T ss_dssp HHHHHC--
T ss_pred HHHHHHcc
Confidence 99999864
No 24
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.94 E-value=1.1e-26 Score=179.37 Aligned_cols=136 Identities=10% Similarity=0.061 Sum_probs=112.6
Q ss_pred ccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHH---HHHHHhhcCcEEEEeecCCCCCCC
Q psy299 37 DSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVE---LDEKFRDRGLRILAFPCNQFGGQE 113 (240)
Q Consensus 37 ~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~---l~~~~~~~~v~vi~Vs~D~~~~~~ 113 (240)
....+|.++|+|++++.+|+.+++++++||++||+||++||++|+.++|.|++ +++++++.++.|++|+.|
T Consensus 3 ~~~~~G~~ap~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d------ 76 (142)
T 3eur_A 3 AKNRLGTKALNFTYTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPD------ 76 (142)
T ss_dssp CTTCTTSBCCCCEEEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECS------
T ss_pred hhhcCCCccCCcEEEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcC------
Confidence 35679999999999999999999999999999999999999999999999999 999999889999999988
Q ss_pred CCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHH
Q psy299 114 PGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIP 193 (240)
Q Consensus 114 ~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~ 193 (240)
++.+.+++++++++++|+.. .|..+. ..+.. ..++..+|++||||++|+|+.+..+ .++|++
T Consensus 77 -~~~~~~~~~~~~~~~~~~~~--~d~~~~--~~~~~----------~~~v~~~P~~~lid~~G~i~~~~~~---~~~l~~ 138 (142)
T 3eur_A 77 -EELDEWKKHRNDFAKEWTNG--YDKELV--IKNKN----------LYDLRAIPTLYLLDKNKTVLLKDAT---LQKVEQ 138 (142)
T ss_dssp -SCHHHHHHHGGGSCTTSEEE--ECTTCH--HHHTT----------CSCCTTCSEEEEECTTCBEEEEEEC---HHHHHH
T ss_pred -CCHHHHHHHHHhcccccccc--cCccch--hhhhh----------hcCCCcCCeEEEECCCCcEEecCCC---HHHHHH
Confidence 57899999999999999887 333221 00111 1256778999999999999998753 344555
Q ss_pred HHH
Q psy299 194 HIE 196 (240)
Q Consensus 194 ~L~ 196 (240)
.|+
T Consensus 139 ~l~ 141 (142)
T 3eur_A 139 YLA 141 (142)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
No 25
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.94 E-value=1.1e-26 Score=183.26 Aligned_cols=148 Identities=14% Similarity=0.151 Sum_probs=115.6
Q ss_pred cccCCcccCCeE--eecCCCCcccCCCCCCcEEEEEEec-CCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCC
Q psy299 38 SWKNAETVYDFT--VKNIKGEDVPLSTYKGHVLVIVNVA-SRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEP 114 (240)
Q Consensus 38 ~~~~g~~~p~f~--l~d~~G~~v~ls~~~gk~vlv~F~a-twCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~ 114 (240)
.+.+|.++|+|+ ++|.+|+.+++++++||++||+||+ +|||+|+.++|.|++++++|+++|+.||+|++|
T Consensus 6 ~l~~G~~~P~f~~~l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d------- 78 (163)
T 3gkn_A 6 DAVLELPAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRD------- 78 (163)
T ss_dssp CCCCCCCGGGGGCCEECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESS-------
T ss_pred ccccCCcCCCccccccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCC-------
Confidence 468999999999 9999999999999999999999997 999999999999999999999999999999987
Q ss_pred CCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCc--ccccccccceEEEEcCCCCeEEeccCCCCc---c
Q psy299 115 GDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGT--LVDAIKWNFTKFIVDKNGVPVERHAANASP---A 189 (240)
Q Consensus 115 ~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~--~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~---~ 189 (240)
+++.+++|+++++++||++ .|..+ .+.+.++...... .......+|++||||++|+|++.+.+.... +
T Consensus 79 -~~~~~~~~~~~~~~~~~~~--~d~~~----~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~ 151 (163)
T 3gkn_A 79 -SVKSHDNFCAKQGFAFPLV--SDGDE----ALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHAD 151 (163)
T ss_dssp -CHHHHHHHHHHHCCSSCEE--ECTTC----HHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHH
T ss_pred -CHHHHHHHHHHhCCCceEE--ECCcH----HHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEcCCCcccCHH
Confidence 8999999999999999998 33322 3444443221100 000001168999999999999988543332 2
Q ss_pred chHHHHHHhc
Q psy299 190 SLIPHIEILG 199 (240)
Q Consensus 190 ~l~~~L~~ll 199 (240)
++.+.|+++.
T Consensus 152 ~il~~l~~l~ 161 (163)
T 3gkn_A 152 AVLAALKAHA 161 (163)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHh
Confidence 3555555554
No 26
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.94 E-value=1.2e-26 Score=179.03 Aligned_cols=143 Identities=13% Similarity=0.142 Sum_probs=120.9
Q ss_pred ccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCC
Q psy299 37 DSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGD 116 (240)
Q Consensus 37 ~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~ 116 (240)
..+.+|.++|+|+++|.+|+.+++++++||++||+||++||++|+.++|.|++++++++++++.+++|++| ++
T Consensus 3 ~~~~~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d-------~~ 75 (148)
T 3hcz_A 3 APLLLGKKAPNLYMTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIE-------RK 75 (148)
T ss_dssp CCCCTTSBCCCCCCBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECC-------SS
T ss_pred CccCCCCcCCceEEecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEec-------CC
Confidence 45789999999999999999999999999999999999999999999999999999999989999999988 46
Q ss_pred HHHHHHHHHhcCcc-eeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHH
Q psy299 117 ADQICEFTKKKNVQ-FDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHI 195 (240)
Q Consensus 117 ~e~~~~~~~~~~~~-fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L 195 (240)
.+.+++++++++++ |+++ .|..+. ..+...+ ++..+|+++|||++|+|+.++.+..+.+.+.+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~--~d~~~~--~~~~~~~----------~i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l 141 (148)
T 3hcz_A 76 DEEWLKFIRSKKIGGWLNV--RDSKNH--TDFKITY----------DIYATPVLYVLDKNKVIIAKRIGYENLDDFLVQY 141 (148)
T ss_dssp SHHHHHHHHHHTCTTSEEE--ECTTCC--CCHHHHH----------CCCSSCEEEEECTTCBEEEESCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCceEE--eccccc--hhHHHhc----------CcCCCCEEEEECCCCcEEEecCCHHHHHHHHHHH
Confidence 78999999999999 8988 444443 1233433 5677899999999999999987765555566666
Q ss_pred HHhcc
Q psy299 196 EILGR 200 (240)
Q Consensus 196 ~~ll~ 200 (240)
.++++
T Consensus 142 ~~~l~ 146 (148)
T 3hcz_A 142 EKSLK 146 (148)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 55554
No 27
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.94 E-value=1.7e-26 Score=180.22 Aligned_cols=141 Identities=16% Similarity=0.219 Sum_probs=120.3
Q ss_pred ccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHH
Q psy299 39 WKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDAD 118 (240)
Q Consensus 39 ~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e 118 (240)
+.+|.++|+|+++|.+|+.+++++++||++||+||++||++|+.++|.|++++++|+++++.+++|++| .+.+
T Consensus 3 l~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d-------~~~~ 75 (152)
T 2lrn_A 3 LATGSVAPAITGIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTD-------RREE 75 (152)
T ss_dssp SCTTEECCCCEEECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECC-------SCHH
T ss_pred ccCCCcCCCceeEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEcc-------CCHH
Confidence 468999999999999999999999999999999999999999999999999999999989999999988 4789
Q ss_pred HHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHh
Q psy299 119 QICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEIL 198 (240)
Q Consensus 119 ~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~l 198 (240)
.+++++++++++||++.+ ..+. ...+.+.+ ++..+|++||||++|+|+.++. ..+++.+.|+++
T Consensus 76 ~~~~~~~~~~~~~~~~~d--~~~~-~~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~l 139 (152)
T 2lrn_A 76 DWKKAIEEDKSYWNQVLL--QKDD-VKDVLESY----------CIVGFPHIILVDPEGKIVAKEL---RGDDLYNTVEKF 139 (152)
T ss_dssp HHHHHHHHHTCCSEEEEE--CHHH-HHHHHHHT----------TCCSSCEEEEECTTSEEEEECC---CTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEec--ccch-hHHHHHHh----------CCCcCCeEEEECCCCeEEEeeC---CHHHHHHHHHHH
Confidence 999999999999999843 2100 12233332 5667799999999999999873 457899999999
Q ss_pred cccC
Q psy299 199 GRTS 202 (240)
Q Consensus 199 l~~~ 202 (240)
+++.
T Consensus 140 ~~~~ 143 (152)
T 2lrn_A 140 VNGA 143 (152)
T ss_dssp HTSS
T ss_pred Hhhc
Confidence 8764
No 28
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.94 E-value=9.7e-27 Score=186.02 Aligned_cols=160 Identities=10% Similarity=0.133 Sum_probs=123.8
Q ss_pred cCCcccC-CeEeecCCCCcccCCCCCCcEEEEEEecCCCC-CcHHHHHHHHHHHHHHhh--cCcEEEEeecCCCCCCCCC
Q psy299 40 KNAETVY-DFTVKNIKGEDVPLSTYKGHVLVIVNVASRCG-YTGKHYKELVELDEKFRD--RGLRILAFPCNQFGGQEPG 115 (240)
Q Consensus 40 ~~g~~~p-~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp-~C~~~~~~L~~l~~~~~~--~~v~vi~Vs~D~~~~~~~~ 115 (240)
..|.++| +|+++|.+|+.+++++++||++||+||++||| +|..+++.|+++++++++ .++.+|+||+| + .+
T Consensus 2 ~~G~~~P~~f~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d----~-~d 76 (170)
T 3me7_A 2 SLGTYVPGDITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFD----P-KD 76 (170)
T ss_dssp CTTCBCCTTCEEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECC----T-TC
T ss_pred CCCCcCCCCeEEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECC----C-CC
Confidence 5799999 99999999999999999999999999999998 699999999999999975 46999999998 4 57
Q ss_pred CHHHHHHHHHhcCcceeeeEeeecCC-CCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCC-CCccchHH
Q psy299 116 DADQICEFTKKKNVQFDLFEKINVNG-DNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAAN-ASPASLIP 193 (240)
Q Consensus 116 ~~e~~~~~~~~~~~~fp~~~~~d~~~-~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~-~~~~~l~~ 193 (240)
+++.+++|+++++++++.|...-... +....+.+.++..... ....+.+.|++||||++|+|+.++.+. .+++++.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~ 155 (170)
T 3me7_A 77 TLEDIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMT-AGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVN 155 (170)
T ss_dssp CHHHHHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEE-ETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHH
T ss_pred CHHHHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEec-CCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHH
Confidence 99999999999998886542111011 1112222221110000 112466778999999999999887654 56788999
Q ss_pred HHHHhcccCCCC
Q psy299 194 HIEILGRTSAIK 205 (240)
Q Consensus 194 ~L~~ll~~~~i~ 205 (240)
.|++++..+++.
T Consensus 156 ~l~~~~~~~~~~ 167 (170)
T 3me7_A 156 ALRLARGEGHHH 167 (170)
T ss_dssp HHHHHTTCSCTT
T ss_pred HHHHhhcccccc
Confidence 999999887653
No 29
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.94 E-value=1.5e-26 Score=179.99 Aligned_cols=141 Identities=14% Similarity=0.279 Sum_probs=123.3
Q ss_pred cCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHH
Q psy299 40 KNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQ 119 (240)
Q Consensus 40 ~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~ 119 (240)
++|+++|+|+++|.+|+.+++++++||++||+||++||++|+.++|.|++++++++++++.+++|++| ++.+.
T Consensus 1 ~~G~~~p~~~l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d-------~~~~~ 73 (151)
T 2f9s_A 1 SEGSDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVG-------ESKIA 73 (151)
T ss_dssp -CCEECCCCEEECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEES-------CCHHH
T ss_pred CCCCcCCcceeEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECC-------CCHHH
Confidence 36899999999999999999999999999999999999999999999999999999888999999987 47899
Q ss_pred HHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 120 ICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 120 ~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
+++++++++++||++ .|... .+.+.+ ++..+|++||||++|+++.++.+..+.++|.+.|++++
T Consensus 74 ~~~~~~~~~~~~~~~--~d~~~----~~~~~~----------~v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll 137 (151)
T 2f9s_A 74 VHNFMKSYGVNFPVV--LDTDR----QVLDAY----------DVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIK 137 (151)
T ss_dssp HHHHHHHHTCCSCEE--EETTS----HHHHHT----------TCCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHS
T ss_pred HHHHHHHcCCCceEE--ECCch----HHHHhc----------CCCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 999999999999998 33322 233333 56778999999999999999988888889999999999
Q ss_pred ccCC
Q psy299 200 RTSA 203 (240)
Q Consensus 200 ~~~~ 203 (240)
++..
T Consensus 138 ~~~~ 141 (151)
T 2f9s_A 138 PGET 141 (151)
T ss_dssp CC--
T ss_pred hhhh
Confidence 8753
No 30
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.94 E-value=2.2e-26 Score=185.78 Aligned_cols=151 Identities=17% Similarity=0.279 Sum_probs=126.7
Q ss_pred ccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCC
Q psy299 37 DSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGD 116 (240)
Q Consensus 37 ~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~ 116 (240)
..+..|..+|+|+++|.+|+.+++++++||++||+||++||++|+.++|.|++++++|+++ +.+++|++|....++.++
T Consensus 5 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~ 83 (188)
T 2cvb_A 5 PELPLESPLIDAELPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDA 83 (188)
T ss_dssp CCCCTTCBCCCCEEECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGS
T ss_pred CcCCCCCCCCCceeecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccC
Confidence 4577999999999999999999999999999999999999999999999999999999988 999999998544444478
Q ss_pred HHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEecc--------CCCCc
Q psy299 117 ADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHA--------ANASP 188 (240)
Q Consensus 117 ~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~--------~~~~~ 188 (240)
.+.+++|+++++++||++ .|.. ..+...+ ++..+|++||||++|+|+++.. +..+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~--~d~~----~~~~~~~----------~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~ 147 (188)
T 2cvb_A 84 PEKMAAFAEEHGIFFPYL--LDET----QEVAKAY----------RALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQS 147 (188)
T ss_dssp HHHHHHHHHHHTCCSCEE--ECSS----SHHHHHT----------TCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCC
T ss_pred HHHHHHHHHHhCCCceEE--ECCc----chHHHHc----------CCCCCCeEEEECCCCcEEEEEecCCccccccccCH
Confidence 999999999999999998 3322 2233333 4666799999999999999822 22356
Q ss_pred cchHHHHHHhcccCCC
Q psy299 189 ASLIPHIEILGRTSAI 204 (240)
Q Consensus 189 ~~l~~~L~~ll~~~~i 204 (240)
++|.+.|++++++..+
T Consensus 148 ~~l~~~i~~ll~~~~~ 163 (188)
T 2cvb_A 148 HDLEAAIEALLRGEEP 163 (188)
T ss_dssp CHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHcCCCC
Confidence 7899999999987643
No 31
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.94 E-value=4.1e-26 Score=179.43 Aligned_cols=148 Identities=13% Similarity=0.214 Sum_probs=125.8
Q ss_pred ccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCC
Q psy299 37 DSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGD 116 (240)
Q Consensus 37 ~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~ 116 (240)
....+|.++|+|+++|.+|+.+++++++||++||+||++|||+|+.++|.|++++++++++++.+++|++| ++
T Consensus 6 ~~~~~g~~~p~~~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d-------~~ 78 (165)
T 3or5_A 6 QADARPTPAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVN-------EQ 78 (165)
T ss_dssp -CCCCCCBCCCCEEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECS-------CC
T ss_pred hhhcCCCCCCCceeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECC-------CC
Confidence 34679999999999999999999999999999999999999999999999999999999989999999988 57
Q ss_pred HHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHH
Q psy299 117 ADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIE 196 (240)
Q Consensus 117 ~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~ 196 (240)
.+.+++++++++++||++.+ . ..+...+..... .++..+|++||||++|+|+.++.+..+.+++.+.|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~----~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 147 (165)
T 3or5_A 79 LPNVKNYMKTQGIIYPVMMA--T-----PELIRAFNGYID----GGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVK 147 (165)
T ss_dssp HHHHHHHHHHHTCCSCEEEC--C-----HHHHHHHHTTST----TCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCceEec--C-----HHHHHHHhhhhc----cCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHH
Confidence 99999999999999999832 1 133333322111 146677999999999999999988888899999999
Q ss_pred HhcccC
Q psy299 197 ILGRTS 202 (240)
Q Consensus 197 ~ll~~~ 202 (240)
++|++.
T Consensus 148 ~~l~~~ 153 (165)
T 3or5_A 148 MALGAK 153 (165)
T ss_dssp HHHC--
T ss_pred HHHhhh
Confidence 999764
No 32
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.94 E-value=1.6e-26 Score=187.54 Aligned_cols=154 Identities=16% Similarity=0.231 Sum_probs=130.0
Q ss_pred ccccccCCcccCCeEee-cCCCCcccCCCCCCc-EEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCC
Q psy299 35 ADDSWKNAETVYDFTVK-NIKGEDVPLSTYKGH-VLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQ 112 (240)
Q Consensus 35 ~~~~~~~g~~~p~f~l~-d~~G~~v~ls~~~gk-~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~ 112 (240)
....+..|..+|+|+++ +.+|+.+++++++|| ++||+||++||++|+.++|.|++++++|+++++.+++|++|....+
T Consensus 14 ~~~~~~~g~~~p~f~l~~~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~ 93 (196)
T 2ywi_A 14 ESNMFPLGKQAPPFALTNVIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQY 93 (196)
T ss_dssp ECCCCCTTCBCCCCEEEETTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTC
T ss_pred cccCCCcCCcCCceeeeecCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccc
Confidence 34567899999999999 999999999999998 5999999999999999999999999999998999999999854444
Q ss_pred CCCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEe---------cc
Q psy299 113 EPGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVER---------HA 183 (240)
Q Consensus 113 ~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~---------~~ 183 (240)
+.++.+.+++|+++++++||++ .|..+ .+...+ ++..+|++||||++|+|+++ +.
T Consensus 94 ~~d~~~~~~~~~~~~~~~~~~~--~d~~~----~~~~~~----------~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~ 157 (196)
T 2ywi_A 94 PEDSPENMKKVAEELGYPFPYL--YDETQ----EVAKAY----------DAACTPDFYIFDRDLKCVYRGQLDDSRPNNG 157 (196)
T ss_dssp GGGSHHHHHHHHHHHTCCSCEE--ECSSC----HHHHHH----------TCCEESEEEEEETTCBEEEEECSSSCCTTTC
T ss_pred cccCHHHHHHHHHHcCCCceEE--ECCch----HHHHHh----------CCCCCCeEEEEcCCCeEEEccccCccccccc
Confidence 4478999999999999999988 33222 333333 46667999999999999998 34
Q ss_pred CCCCccchHHHHHHhcccCCC
Q psy299 184 ANASPASLIPHIEILGRTSAI 204 (240)
Q Consensus 184 ~~~~~~~l~~~L~~ll~~~~i 204 (240)
+..+.++|.+.|++++++.++
T Consensus 158 g~~~~~~l~~~i~~ll~~~~~ 178 (196)
T 2ywi_A 158 IPVTGESIRAALDALLEGRPV 178 (196)
T ss_dssp CCCCCHHHHHHHHHHHHTCCC
T ss_pred CccCHHHHHHHHHHHHcCCCC
Confidence 556778899999999987644
No 33
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.94 E-value=2.2e-26 Score=181.79 Aligned_cols=141 Identities=16% Similarity=0.220 Sum_probs=114.2
Q ss_pred ccCCcccCCeEeecCCCCcccCCCCCCcE-EEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCC
Q psy299 39 WKNAETVYDFTVKNIKGEDVPLSTYKGHV-LVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGD 116 (240)
Q Consensus 39 ~~~g~~~p~f~l~d~~G~~v~ls~~~gk~-vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~ 116 (240)
+.+|.++|+|+++|.+|+.+++++++||+ +||+|| ++|||+|+.++|.|++++++|+++|+.||+|++| +
T Consensus 2 l~~G~~~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d--------~ 73 (161)
T 3drn_A 2 VKVGDKAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSD--------D 73 (161)
T ss_dssp CCTTSBCCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESC--------C
T ss_pred CCCCCcCCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCC--------C
Confidence 46899999999999999999999999997 999999 9999999999999999999999999999999986 7
Q ss_pred HHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCcc----chH
Q psy299 117 ADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPA----SLI 192 (240)
Q Consensus 117 ~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~----~l~ 192 (240)
++.+++|+++++++||++. |.. ..+.+.++... ....+|++||||++|+|++++.+..... ++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~--d~~----~~~~~~~~v~~------~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il 141 (161)
T 3drn_A 74 INSHKRFKEKYKLPFILVS--DPD----KKIRELYGAKG------FILPARITFVIDKKGIIRHIYNSQMNPANHVNEAL 141 (161)
T ss_dssp HHHHHHHHHHTTCCSEEEE--CTT----SHHHHHTTCCC------SSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCceEEE--CCc----HHHHHHcCCCC------cCcccceEEEECCCCEEEEEEecCCCCCcCHHHHH
Confidence 8999999999999999993 322 23444442211 0112689999999999999987743332 244
Q ss_pred HHHHHhc
Q psy299 193 PHIEILG 199 (240)
Q Consensus 193 ~~L~~ll 199 (240)
+.|+++-
T Consensus 142 ~~l~~l~ 148 (161)
T 3drn_A 142 KALKQIK 148 (161)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 4454443
No 34
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.94 E-value=2.5e-26 Score=180.71 Aligned_cols=151 Identities=11% Similarity=0.156 Sum_probs=117.7
Q ss_pred ccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCC-cHHHHHHHHHHHHHHhh----cCcEEEEeecCCCCCCCCCCHH
Q psy299 44 TVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGY-TGKHYKELVELDEKFRD----RGLRILAFPCNQFGGQEPGDAD 118 (240)
Q Consensus 44 ~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~-C~~~~~~L~~l~~~~~~----~~v~vi~Vs~D~~~~~~~~~~e 118 (240)
.+|+|+++|.+|+.+++++++||++||+||++|||+ |+.++|.|+++++++++ .++.+++|++| +..++++
T Consensus 2 ~ap~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d----~~~d~~~ 77 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISID----PERDTKE 77 (164)
T ss_dssp CCCCCEEEETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESC----TTTCCHH
T ss_pred CCCCeEEEeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeC----CCCCCHH
Confidence 579999999999999999999999999999999998 99999999999999987 48999999998 4567899
Q ss_pred HHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCC-----cccccccccceEEEEcCCCCeEEeccCCCCccchHH
Q psy299 119 QICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGG-----TLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIP 193 (240)
Q Consensus 119 ~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~-----~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~ 193 (240)
.+++|+++++++|+++.. ..+....+.+.++..... .....+.+.|++||||++|+|+.++.+..++++|.+
T Consensus 78 ~~~~~~~~~~~~~~~l~~---~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~ 154 (164)
T 2ggt_A 78 AIANYVKEFSPKLVGLTG---TREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAA 154 (164)
T ss_dssp HHHHHHHTTCSSCEEEEC---CHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHH
T ss_pred HHHHHHHHcCCCeEEEeC---CHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHH
Confidence 999999999999998721 001111122222110000 000012233389999999999999988888888999
Q ss_pred HHHHhccc
Q psy299 194 HIEILGRT 201 (240)
Q Consensus 194 ~L~~ll~~ 201 (240)
.|+++|+.
T Consensus 155 ~l~~ll~~ 162 (164)
T 2ggt_A 155 SIATHMRP 162 (164)
T ss_dssp HHHHHHGG
T ss_pred HHHHHHHh
Confidence 99999865
No 35
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.94 E-value=2.3e-26 Score=179.23 Aligned_cols=139 Identities=12% Similarity=0.162 Sum_probs=114.9
Q ss_pred ccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHH
Q psy299 44 TVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEF 123 (240)
Q Consensus 44 ~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~ 123 (240)
++|+|.+. .+|+.+++++++||++||+||++|||+|+.++|.|+++++++++.++.+++|++| +.+.+++|
T Consensus 4 pa~~~~~~-~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d--------~~~~~~~~ 74 (151)
T 3raz_A 4 SADELAGW-KDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALD--------TSDNIGNF 74 (151)
T ss_dssp ---CEEET-TTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESS--------CHHHHHHH
T ss_pred Ccchhhcc-cCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECC--------ChHHHHHH
Confidence 44555544 7999999999999999999999999999999999999999998889999999987 68999999
Q ss_pred HHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccC
Q psy299 124 TKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 124 ~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
+++++++||++.+ . +.....+.+.++ ..+..+|++||||++|+|+.++.+..+.++|.+.|+++.++.
T Consensus 75 ~~~~~~~~~~~~~--~-~~~~~~~~~~~~--------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~ 142 (151)
T 3raz_A 75 LKQTPVSYPIWRY--T-GANSRNFMKTYG--------NTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSKC 142 (151)
T ss_dssp HHHSCCSSCEEEE--C-CSCHHHHHHTTT--------CCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC-
T ss_pred HHHcCCCCceEec--C-ccchHHHHHHhC--------CccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 9999999999843 2 222333433331 026677999999999999999999989999999999998774
No 36
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.94 E-value=6.4e-28 Score=192.16 Aligned_cols=150 Identities=15% Similarity=0.160 Sum_probs=118.2
Q ss_pred cccCCcccCCeEeecCCCCcccCCCC--CCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCC
Q psy299 38 SWKNAETVYDFTVKNIKGEDVPLSTY--KGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEP 114 (240)
Q Consensus 38 ~~~~g~~~p~f~l~d~~G~~v~ls~~--~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~ 114 (240)
.+++|+++|+|+++|.+|+.++|+++ +||++||+|| ++|||+|..++|.|++++++|+++|+.+++||.|
T Consensus 4 ml~vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d------- 76 (164)
T 4gqc_A 4 LVELGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVD------- 76 (164)
T ss_dssp CCCTTSBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESS-------
T ss_pred cccCCCCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCC-------
Confidence 46799999999999999999999998 8999999887 9999999999999999999999999999999986
Q ss_pred CCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCC-----CCcc
Q psy299 115 GDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAAN-----ASPA 189 (240)
Q Consensus 115 ~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~-----~~~~ 189 (240)
+++.+++|.++++++||++ .|..+ .+.+.++.......+......|++||||++|+|++++.+. .+.+
T Consensus 77 -~~~~~~~~~~~~~~~fp~l--~D~~~----~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~ 149 (164)
T 4gqc_A 77 -SPWCLKKFKDENRLAFNLL--SDYNR----EVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYD 149 (164)
T ss_dssp -CHHHHHHHHHHTTCCSEEE--ECTTS----HHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHH
T ss_pred -CHHHHHHHHHhcCccccee--ecCch----HHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHH
Confidence 8999999999999999999 44433 3344443321100011112347899999999999876432 2345
Q ss_pred chHHHHHHhccc
Q psy299 190 SLIPHIEILGRT 201 (240)
Q Consensus 190 ~l~~~L~~ll~~ 201 (240)
++.++|++|.++
T Consensus 150 eil~~l~~l~~e 161 (164)
T 4gqc_A 150 EVVREANKIAGE 161 (164)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc
Confidence 677778777654
No 37
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.94 E-value=6.6e-26 Score=176.33 Aligned_cols=143 Identities=13% Similarity=0.257 Sum_probs=125.3
Q ss_pred cCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHH
Q psy299 40 KNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQ 119 (240)
Q Consensus 40 ~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~ 119 (240)
..|.++|+|+++|.+|+.+++++++||++||.||++|||+|+.++|.|++++++++++++.+++|+.| .++.+.
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~------~~~~~~ 76 (153)
T 2l5o_A 3 LDSKTAPAFSLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQP------IDPIES 76 (153)
T ss_dssp -CCTTCCSCEEECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECT------TSCHHH
T ss_pred CCCCCCCCcEeecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecC------CCCHHH
Confidence 47999999999999999999999999999999999999999999999999999999989999999976 358999
Q ss_pred HHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 120 ICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 120 ~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
+++|+++++++|+++ .|.. ..+.+.+ ++..+|++||||++|+|+.++.+..+.+.|.+.|+++|
T Consensus 77 ~~~~~~~~~~~~~~~--~d~~----~~~~~~~----------~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 140 (153)
T 2l5o_A 77 VRQYVKDYGLPFTVM--YDAD----KAVGQAF----------GTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAW 140 (153)
T ss_dssp HHHHHHHTTCCSEEE--ECSS----CHHHHHH----------TCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCceEE--cCch----HHHHHHc----------CCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 999999999999988 3322 2344433 56778999999999999999988888889999999999
Q ss_pred ccCCC
Q psy299 200 RTSAI 204 (240)
Q Consensus 200 ~~~~i 204 (240)
+....
T Consensus 141 ~~~~~ 145 (153)
T 2l5o_A 141 RNSDA 145 (153)
T ss_dssp HCCSS
T ss_pred Hhhhh
Confidence 77643
No 38
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.93 E-value=7.6e-26 Score=179.30 Aligned_cols=149 Identities=7% Similarity=0.126 Sum_probs=118.1
Q ss_pred CCeEeecCCCCcccCCCCCCcEEEEEEecCCCCC-cHHHHHHHHHHHHHHhh----cCcEEEEeecCCCCCCCCCCHHHH
Q psy299 46 YDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGY-TGKHYKELVELDEKFRD----RGLRILAFPCNQFGGQEPGDADQI 120 (240)
Q Consensus 46 p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~-C~~~~~~L~~l~~~~~~----~~v~vi~Vs~D~~~~~~~~~~e~~ 120 (240)
|+|+++|.+|+.+++++++||++||+||++||++ |+.++|.|+++++++++ .++.||+|++| +..++++.+
T Consensus 7 p~f~l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d----~~~d~~~~~ 82 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVD----PERDDVEAM 82 (171)
T ss_dssp SCCEEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESC----STTCCHHHH
T ss_pred CCeEEEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEEC----CCCCCHHHH
Confidence 8999999999999999999999999999999997 99999999999999985 48999999998 445789999
Q ss_pred HHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCC-----cccccccccceEEEEcCCCCeEEeccCCCCccchHHHH
Q psy299 121 CEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGG-----TLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHI 195 (240)
Q Consensus 121 ~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~-----~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L 195 (240)
++|+++++++|+++.+ . .+....+.+.++..... .....+.+.|++||||++|+|+.++.+..++++|.+.|
T Consensus 83 ~~~~~~~~~~~~~l~~--~-~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l 159 (171)
T 2rli_A 83 ARYVQDFHPRLLGLTG--S-TKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSV 159 (171)
T ss_dssp HHHHHTTCTTCCEEEC--C-HHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHH
T ss_pred HHHHHHcCCCeEEEeC--C-HHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHH
Confidence 9999999999988832 0 00111233333221100 00112335569999999999999998888888899999
Q ss_pred HHhccc
Q psy299 196 EILGRT 201 (240)
Q Consensus 196 ~~ll~~ 201 (240)
+++++.
T Consensus 160 ~~ll~~ 165 (171)
T 2rli_A 160 RRHMAA 165 (171)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999865
No 39
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.93 E-value=1.5e-25 Score=175.45 Aligned_cols=140 Identities=19% Similarity=0.256 Sum_probs=114.5
Q ss_pred ccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCC
Q psy299 37 DSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGD 116 (240)
Q Consensus 37 ~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~ 116 (240)
+....|.++|+|+++|.+|+.+++++++||++||+||++|||+|+.++|.|++++++|+++|+.|++|++| ..
T Consensus 7 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d-------~~ 79 (152)
T 2lrt_A 7 EDKIKEASIIDIQLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLD-------GD 79 (152)
T ss_dssp CSSSCTTCSCCCCEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECS-------CC
T ss_pred hhhccCCCCCCeEEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEcc-------CC
Confidence 34468899999999999999999999999999999999999999999999999999999989999999998 35
Q ss_pred HHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHH
Q psy299 117 ADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIE 196 (240)
Q Consensus 117 ~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~ 196 (240)
.+.++++..+ ++||++ .|..+... .+...+ ++..+|++||||++|+|+.++.+. .++.+.+.
T Consensus 80 ~~~~~~~~~~--~~~~~~--~d~~~~~~-~~~~~~----------~v~~~P~~~lid~~G~i~~~~~g~---~~~e~~~~ 141 (152)
T 2lrt_A 80 EHFWKTSADN--LPWVCV--RDANGAYS-SYISLY----------NVTNLPSVFLVNRNNELSARGENI---KDLDEAIK 141 (152)
T ss_dssp HHHHHHHHTT--CSSEEE--ECSSGGGC-HHHHHH----------TCCSCSEEEEEETTTEEEEETTTC---SCHHHHHH
T ss_pred HHHHHHHHhC--CCceEE--ECCCCcch-HHHHHc----------CcccCceEEEECCCCeEEEecCCH---HHHHHHHH
Confidence 6778888754 678888 44444321 233333 466679999999999999998765 45666777
Q ss_pred Hhccc
Q psy299 197 ILGRT 201 (240)
Q Consensus 197 ~ll~~ 201 (240)
+++++
T Consensus 142 ~~~~~ 146 (152)
T 2lrt_A 142 KLLEG 146 (152)
T ss_dssp HHHGG
T ss_pred HHHhc
Confidence 66655
No 40
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.93 E-value=2.9e-25 Score=172.46 Aligned_cols=140 Identities=19% Similarity=0.308 Sum_probs=120.7
Q ss_pred ccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHH
Q psy299 39 WKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDAD 118 (240)
Q Consensus 39 ~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e 118 (240)
+.+|.++|+|++++ +|+.+++++++||++||+||++|||+|+.++|.|++++++++++++.+++|++| .+.+
T Consensus 3 l~~G~~~P~f~l~~-~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d-------~~~~ 74 (152)
T 3gl3_A 3 LDKGDKAPDFALPG-KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLD-------AKTG 74 (152)
T ss_dssp CCTTSBCCCCEEEB-SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECC-------SSHH
T ss_pred CCCCCcCCceEeeC-CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECC-------CCHH
Confidence 57899999999999 999999999999999999999999999999999999999999999999999988 4689
Q ss_pred HHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCc--cchHHHHH
Q psy299 119 QICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASP--ASLIPHIE 196 (240)
Q Consensus 119 ~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~--~~l~~~L~ 196 (240)
.+++++++++++|+++ .|..+ .+...+ ++..+|++||||++|+|+.++.+..+. +.|.+.|+
T Consensus 75 ~~~~~~~~~~~~~~~~--~d~~~----~~~~~~----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~ 138 (152)
T 3gl3_A 75 DAMKFLAQVPAEFTVA--FDPKG----QTPRLY----------GVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQIL 138 (152)
T ss_dssp HHHHHHHHSCCCSEEE--ECTTC----HHHHHT----------TCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCCcee--ECCcc----hhHHHc----------CCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHH
Confidence 9999999999999998 33322 333433 566779999999999999988776544 57999999
Q ss_pred HhcccC
Q psy299 197 ILGRTS 202 (240)
Q Consensus 197 ~ll~~~ 202 (240)
+++...
T Consensus 139 ~~~~~~ 144 (152)
T 3gl3_A 139 AALGGN 144 (152)
T ss_dssp HHTC--
T ss_pred HHHccc
Confidence 988664
No 41
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.93 E-value=3.3e-25 Score=172.17 Aligned_cols=142 Identities=16% Similarity=0.267 Sum_probs=122.6
Q ss_pred ccCCcccC-CeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCH
Q psy299 39 WKNAETVY-DFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDA 117 (240)
Q Consensus 39 ~~~g~~~p-~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~ 117 (240)
+.+|+++| +|+++|.+|+.+++++++||++||.||++||++|+.++|.|++++++++++++.+++|++| .+.
T Consensus 3 l~~G~~~p~~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d-------~~~ 75 (152)
T 2lja_A 3 LRSGNPSAASFSYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCD-------KNK 75 (152)
T ss_dssp TTTTCCCSSSCEEEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECC-------SCH
T ss_pred cccCCCCCcccEeecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEcc-------CcH
Confidence 56899999 9999999999999999999999999999999999999999999999999888999999988 467
Q ss_pred HHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHH
Q psy299 118 DQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEI 197 (240)
Q Consensus 118 e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ 197 (240)
+.+++++++++++++.+. .|. ...+.+.+ ++..+|+++|||++|+|+.++.+..+.++|.+.|++
T Consensus 76 ~~~~~~~~~~~~~~~~~~-~d~----~~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 140 (152)
T 2lja_A 76 KAWENMVTKDQLKGIQLH-MGT----DRTFMDAY----------LINGIPRFILLDRDGKIISANMTRPSDPKTAEKFNE 140 (152)
T ss_dssp HHHHHHHHHHTCCSEEEE-CSS----CTHHHHHT----------TCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCceee-cCc----chhHHHHc----------CcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHH
Confidence 899999999999875441 221 22344443 566779999999999999999888888899999999
Q ss_pred hcccC
Q psy299 198 LGRTS 202 (240)
Q Consensus 198 ll~~~ 202 (240)
++...
T Consensus 141 ~~~~~ 145 (152)
T 2lja_A 141 LLGLE 145 (152)
T ss_dssp HHTCC
T ss_pred Hhccc
Confidence 88654
No 42
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.93 E-value=1.5e-25 Score=180.39 Aligned_cols=149 Identities=19% Similarity=0.245 Sum_probs=122.5
Q ss_pred ccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCC
Q psy299 37 DSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGD 116 (240)
Q Consensus 37 ~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~ 116 (240)
.....|..+|+|+++|.+|+.+++++++||++||+||++||++|+.++|.|+++++++++.++.|++|++|. ++
T Consensus 32 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~------~~ 105 (186)
T 1jfu_A 32 TMASAPLKLPDLAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDT------RD 105 (186)
T ss_dssp EECCSCCBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCC------SC
T ss_pred ccccCCCcCCCcEeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCC------CC
Confidence 356789999999999999999999999999999999999999999999999999999997789999999872 35
Q ss_pred HHHHHHHHHhcCc-ceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCC--ccchHH
Q psy299 117 ADQICEFTKKKNV-QFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANAS--PASLIP 193 (240)
Q Consensus 117 ~e~~~~~~~~~~~-~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~--~~~l~~ 193 (240)
.+.++++++++++ .||++ .|.. ..+.+.++... ....+|++||||++|+|+.++.+..+ .+++.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~--~d~~----~~~~~~~~~~~------~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~ 173 (186)
T 1jfu_A 106 PEKPKTFLKEANLTRLGYF--NDQK----AKVFQDLKAIG------RALGMPTSVLVDPQGCEIATIAGPAEWASEDALK 173 (186)
T ss_dssp TTHHHHHHHHTTCCTTCCE--ECTT----CHHHHHHHTTT------CCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHH
T ss_pred HHHHHHHHHHcCCCCCceE--ECCc----chHHHHhcccc------ccCCCCEEEEECCCCCEEEEEecCCccCHHHHHH
Confidence 6789999999999 58988 3332 33455543321 12356999999999999998877654 677999
Q ss_pred HHHHhcccCC
Q psy299 194 HIEILGRTSA 203 (240)
Q Consensus 194 ~L~~ll~~~~ 203 (240)
.|++++++++
T Consensus 174 ~l~~ll~~~a 183 (186)
T 1jfu_A 174 LIRAATGKAA 183 (186)
T ss_dssp HHHHHHC---
T ss_pred HHHHHhcccc
Confidence 9999998764
No 43
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.93 E-value=1.3e-25 Score=180.21 Aligned_cols=142 Identities=14% Similarity=0.149 Sum_probs=119.2
Q ss_pred cccccccCCcccCCeEeecCCC--CcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCC
Q psy299 34 MADDSWKNAETVYDFTVKNIKG--EDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGG 111 (240)
Q Consensus 34 ~~~~~~~~g~~~p~f~l~d~~G--~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~ 111 (240)
.....+.+|.++|+|+++|.+| +.+++++++||++||+||++|||+|+.++|.|++++++ ++.|++|++|
T Consensus 25 ~~~~~~~~G~~~P~f~l~~~~g~~~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~---- 96 (176)
T 3kh7_A 25 SELPSALIGKPFPAFDLPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYK---- 96 (176)
T ss_dssp GGSTTTTTTSBCCCCEEEBSSCTTSEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEES----
T ss_pred ccccccccCCcCCCcEecccCCCCceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCC----
Confidence 3445578999999999999999 88999999999999999999999999999999998876 6999999987
Q ss_pred CCCCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccch
Q psy299 112 QEPGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASL 191 (240)
Q Consensus 112 ~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l 191 (240)
++.+.+++|+++++++|+.+. .|..+ .+...+ ++..+|++||||++|+|++++.+..+.+.+
T Consensus 97 ---d~~~~~~~~~~~~~~~~~~~~-~d~~~----~~~~~~----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l 158 (176)
T 3kh7_A 97 ---DDNAAAIKWLNELHNPYLLSI-SDADG----TLGLDL----------GVYGAPETYLIDKQGIIRHKIVGVVDQKVW 158 (176)
T ss_dssp ---CCHHHHHHHHHHTTCCCSEEE-EETTC----HHHHHH----------TCCSSCEEEEECTTCBEEEEEESCCCHHHH
T ss_pred ---CCHHHHHHHHHHcCCCCceEE-ECCcc----hHHHHc----------CCCCCCeEEEECCCCeEEEEEcCCCCHHHH
Confidence 589999999999999998531 33222 333333 566779999999999999999888888888
Q ss_pred HHHHHHhccc
Q psy299 192 IPHIEILGRT 201 (240)
Q Consensus 192 ~~~L~~ll~~ 201 (240)
.+.|+++|+.
T Consensus 159 ~~~l~~~l~~ 168 (176)
T 3kh7_A 159 REQLAPLYQQ 168 (176)
T ss_dssp HHHTHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8777777653
No 44
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.93 E-value=1.2e-25 Score=181.05 Aligned_cols=151 Identities=15% Similarity=0.131 Sum_probs=114.8
Q ss_pred ccccccCCcc----cCCeEeecCCCCcccCCCCCCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCC
Q psy299 35 ADDSWKNAET----VYDFTVKNIKGEDVPLSTYKGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQF 109 (240)
Q Consensus 35 ~~~~~~~g~~----~p~f~l~d~~G~~v~ls~~~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~ 109 (240)
....+.+|.. +|+|+++|.+|+.++|++++||++||+|| ++||++|+.++|.|++++++|+++|+.|++||.|
T Consensus 17 ~~~~l~~Gd~ig~~aP~f~l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D-- 94 (179)
T 3ixr_A 17 RGSHMNIGDTLNHSLLNHPLMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRD-- 94 (179)
T ss_dssp -CCSSCTTCBCCHHHHHCCEEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESC--
T ss_pred CCcccCcCcccCCcCCCeeEECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCC--
Confidence 3445667776 99999999999999999999999999998 9999999999999999999999999999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCc--ccccccccceEEEEcCCCCeEEeccCCCC
Q psy299 110 GGQEPGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGT--LVDAIKWNFTKFIVDKNGVPVERHAANAS 187 (240)
Q Consensus 110 ~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~--~~~~v~~~P~~~lID~~G~Iv~~~~~~~~ 187 (240)
+++.+++|+++++++||++ .|..+ .+.+.++...... ........|++||||++|+|++.+.+...
T Consensus 95 ------~~~~~~~~~~~~~~~f~~l--~D~~~----~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~ 162 (179)
T 3ixr_A 95 ------SVKSHDSFCAKQGFTFPLV--SDSDA----ILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKV 162 (179)
T ss_dssp ------CHHHHHHHHHHHTCCSCEE--ECTTC----HHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECSCCS
T ss_pred ------CHHHHHHHHHHcCCceEEE--ECCch----HHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcCCCC
Confidence 7899999999999999999 34332 3444443321100 00011135899999999999998854333
Q ss_pred c---cchHHHHHHhc
Q psy299 188 P---ASLIPHIEILG 199 (240)
Q Consensus 188 ~---~~l~~~L~~ll 199 (240)
. +++.+.|+++.
T Consensus 163 ~~~~~~il~~l~~l~ 177 (179)
T 3ixr_A 163 PGHAEEVLNKLKAHA 177 (179)
T ss_dssp TTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh
Confidence 2 23555555543
No 45
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.93 E-value=3.5e-25 Score=172.40 Aligned_cols=142 Identities=18% Similarity=0.329 Sum_probs=119.4
Q ss_pred ccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHH
Q psy299 39 WKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDAD 118 (240)
Q Consensus 39 ~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e 118 (240)
..+|.++|+|+++|.+|+.+++++++||++||.||++||++|+.++|.|+++++++++.++.+++|++|. ++.+
T Consensus 2 ~~~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~------~~~~ 75 (154)
T 3kcm_A 2 SLEENPAPDFTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDE------GGKV 75 (154)
T ss_dssp -CTTSBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCT------THHH
T ss_pred CCCCCCCCCeEEEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCC------cchH
Confidence 3689999999999999999999999999999999999999999999999999999999889999999882 3489
Q ss_pred HHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCC--CccchHHHHH
Q psy299 119 QICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANA--SPASLIPHIE 196 (240)
Q Consensus 119 ~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~--~~~~l~~~L~ 196 (240)
.+++++++++++||++ .|.. ..+...+ ++..+|++||||++|+|+.++.+.. +.+++.+.|+
T Consensus 76 ~~~~~~~~~~~~~~~~--~d~~----~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~ 139 (154)
T 3kcm_A 76 AVEEFFRKTGFTLPVL--LDAD----KRVGKLY----------GTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLN 139 (154)
T ss_dssp HHHHHHHHHCCCCCEE--ECTT----CHHHHHH----------TCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHH
T ss_pred HHHHHHHHcCCCeeEE--ecCc----hHHHHHh----------CCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHH
Confidence 9999999999999998 3322 2344443 5667799999999999999887765 4557999999
Q ss_pred HhcccC
Q psy299 197 ILGRTS 202 (240)
Q Consensus 197 ~ll~~~ 202 (240)
++..+.
T Consensus 140 ~l~~~~ 145 (154)
T 3kcm_A 140 NELSKA 145 (154)
T ss_dssp TC----
T ss_pred HHHHHh
Confidence 888664
No 46
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.93 E-value=3.6e-25 Score=180.30 Aligned_cols=156 Identities=12% Similarity=0.141 Sum_probs=119.0
Q ss_pred cccCCcccCCeEeecCC-------------C--CcccCCCCCCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEE
Q psy299 38 SWKNAETVYDFTVKNIK-------------G--EDVPLSTYKGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRI 101 (240)
Q Consensus 38 ~~~~g~~~p~f~l~d~~-------------G--~~v~ls~~~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~v 101 (240)
.+.+|.++|+|++++.+ | +.+++++++||++||+|| ++|||+|+.++|.|++++++|+++++.|
T Consensus 3 ~l~~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~v 82 (195)
T 2bmx_A 3 LLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQI 82 (195)
T ss_dssp BCCTTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEE
T ss_pred cCCCCCcCCCcCcccccccccccccccccCCCccEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEE
Confidence 46789999999999998 7 899999999999999999 9999999999999999999999889999
Q ss_pred EEeecCCCCCCCCCCHHHHHHHHHhc----CcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCC
Q psy299 102 LAFPCNQFGGQEPGDADQICEFTKKK----NVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGV 177 (240)
Q Consensus 102 i~Vs~D~~~~~~~~~~e~~~~~~~~~----~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~ 177 (240)
|+|++| +.+.+++|++++ +++||++. |.. ..+...++.... . + ..+|++||||++|+
T Consensus 83 v~Vs~d--------~~~~~~~~~~~~~~~~~~~~~~~~--d~~----~~~~~~~~v~~~--~--g-~~~P~~~lid~~G~ 143 (195)
T 2bmx_A 83 LGVSID--------SEFAHFQWRAQHNDLKTLPFPMLS--DIK----RELSQAAGVLNA--D--G-VADRVTFIVDPNNE 143 (195)
T ss_dssp EEEESS--------CHHHHHHHHHHCTTGGGCCSCEEE--CTT----SHHHHHHTCBCT--T--S-SBCEEEEEECTTSB
T ss_pred EEEECC--------CHHHHHHHHHHhccccCCceeEEe--CCc----hHHHHHhCCccc--C--C-CccceEEEEcCCCe
Confidence 999987 688999999998 89999983 322 234444422111 0 0 15699999999999
Q ss_pred eEEeccCCC----CccchHHHHHHhcccC--CCCcceeEEE
Q psy299 178 PVERHAANA----SPASLIPHIEILGRTS--AIKWNFTKFI 212 (240)
Q Consensus 178 Iv~~~~~~~----~~~~l~~~L~~ll~~~--~i~~~~~~~~ 212 (240)
|++++.+.. +.++|.+.|++++.+. +.+|.=.+.+
T Consensus 144 i~~~~~g~~~~~~~~~~l~~~l~~l~~~~~~p~~w~~~~~~ 184 (195)
T 2bmx_A 144 IQFVSATAGSVGRNVDEVLRVLDALQSDELCASNWRKGDPT 184 (195)
T ss_dssp EEEEEEECTTCCCCHHHHHHHHHHHHC--------------
T ss_pred EEEEEecCCCCCCCHHHHHHHHHHHhhCCCcCcccccCCcc
Confidence 999886544 4567899999988543 5577433333
No 47
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.93 E-value=2.1e-25 Score=177.88 Aligned_cols=145 Identities=14% Similarity=0.104 Sum_probs=113.5
Q ss_pred ccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCC
Q psy299 37 DSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPG 115 (240)
Q Consensus 37 ~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~ 115 (240)
..+.+|+++|+|+++|.+|+.+++++++||++||+|| ++|||+|+.++|.|+++++++ .++.||+||.|
T Consensus 19 ~~l~~g~~~P~f~l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d-------- 88 (171)
T 2yzh_A 19 PELKVGDRAPEAVVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMD-------- 88 (171)
T ss_dssp CCCCTTSBCCCEEEEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESS--------
T ss_pred CcCCCCCcCCceEEECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCC--------
Confidence 4567999999999999999999999999999999999 899999999999999999999 58999999987
Q ss_pred CHHHHHHHHHhcCc-ceeeeEeee-cCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccC-----CCCc
Q psy299 116 DADQICEFTKKKNV-QFDLFEKIN-VNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAA-----NASP 188 (240)
Q Consensus 116 ~~e~~~~~~~~~~~-~fp~~~~~d-~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~-----~~~~ 188 (240)
+++.+++|++++++ +||++ .| ..+. + +.++.........+ ...|++||||++|+|++++.+ ..+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~l--~D~~~~~----~-~~~gv~~~~~~~~g-~~~p~~~liD~~G~i~~~~~~~~~~~~~~~ 160 (171)
T 2yzh_A 89 LPFAQKRFCESFNIQNVTVA--SDFRYRD----M-EKYGVLIGEGALKG-ILARAVFIIDKEGKVAYVQLVPEITEEPNY 160 (171)
T ss_dssp CHHHHHHHHHHTTCCSSEEE--ECTTTCG----G-GGGTCBBCSSTTTT-SBCCEEEEECTTSBEEEEEECSBTTSCCCC
T ss_pred CHHHHHHHHHHcCCCCeEEe--ecCccCc----H-HHhCCEecccccCC-ceeeEEEEEcCCCeEEEEEeCCCcCCCCCH
Confidence 78899999999999 89998 44 2222 2 22222111000001 135899999999999998853 2345
Q ss_pred cchHHHHHHhc
Q psy299 189 ASLIPHIEILG 199 (240)
Q Consensus 189 ~~l~~~L~~ll 199 (240)
+++.+.|+++|
T Consensus 161 ~~ll~~l~~ll 171 (171)
T 2yzh_A 161 DEVVNKVKELI 171 (171)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHhhC
Confidence 66888888764
No 48
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.93 E-value=5.3e-25 Score=177.95 Aligned_cols=143 Identities=11% Similarity=0.154 Sum_probs=118.3
Q ss_pred cCCcccCCeEeecCCCC----cccCCCCCCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCC
Q psy299 40 KNAETVYDFTVKNIKGE----DVPLSTYKGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEP 114 (240)
Q Consensus 40 ~~g~~~p~f~l~d~~G~----~v~ls~~~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~ 114 (240)
.+|..+|+|+++|.+|+ .+++++++||++||+|| ++|||+|+.++|.|++++++|+++++.|++|++|
T Consensus 2 ~~G~~~P~f~l~~~~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d------- 74 (187)
T 1we0_A 2 LIGTEVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTD------- 74 (187)
T ss_dssp CTTCBCCCCEEEEECSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESS-------
T ss_pred CCCCcCCCeEEeccCCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECC-------
Confidence 57999999999999999 99999999999999999 9999999999999999999999989999999987
Q ss_pred CCHHHHHHHHHhc----CcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCC----
Q psy299 115 GDADQICEFTKKK----NVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANA---- 186 (240)
Q Consensus 115 ~~~e~~~~~~~~~----~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~---- 186 (240)
+.+.+++|++++ +++||++. |.. ..+.+.++...... + ..+|++||||++|+|++++.+..
T Consensus 75 -~~~~~~~~~~~~~~~~~~~~~~~~--d~~----~~~~~~~~v~~~~~---g-~~~P~~~lid~~G~i~~~~~g~~~~~~ 143 (187)
T 1we0_A 75 -THFVHKAWHENSPAVGSIEYIMIG--DPS----QTISRQFDVLNEET---G-LADRGTFIIDPDGVIQAIEINADGIGR 143 (187)
T ss_dssp -CHHHHHHHHHSCHHHHTCCSEEEE--CTT----CHHHHHTTCEETTT---T-EECEEEEEECTTSBEEEEEEECTTSCC
T ss_pred -CHHHHHHHHHHhccccCCCceEEE--CCc----hHHHHHhCCCcCCC---C-ceeeEEEEECCCCeEEEEEecCCCCCC
Confidence 688999999998 89999983 322 23444443211100 0 15699999999999999886643
Q ss_pred CccchHHHHHHhcc
Q psy299 187 SPASLIPHIEILGR 200 (240)
Q Consensus 187 ~~~~l~~~L~~ll~ 200 (240)
+.++|.+.|++++.
T Consensus 144 ~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 144 DASTLINKVKAAQY 157 (187)
T ss_dssp CTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhh
Confidence 56779999998885
No 49
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.93 E-value=3.5e-25 Score=170.51 Aligned_cols=145 Identities=15% Similarity=0.200 Sum_probs=124.5
Q ss_pred ccCCcccCCeEe--ecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCC
Q psy299 39 WKNAETVYDFTV--KNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGD 116 (240)
Q Consensus 39 ~~~g~~~p~f~l--~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~ 116 (240)
+..|.++|+|++ ++.+|+.+++++++||++||.||++||++|+.++|.|++++++++++ +.+++|++|.. ....+
T Consensus 1 l~~g~~~P~f~~~~~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~--~~~~~ 77 (148)
T 2b5x_A 1 MKLRQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRS--EDDLD 77 (148)
T ss_dssp CCTTCBCCCCCCCSEEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCS--TTTSS
T ss_pred CCCCCCCCCCccccccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCC--ccccC
Confidence 357999999999 78999999999999999999999999999999999999999999987 99999998842 22347
Q ss_pred HHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHH
Q psy299 117 ADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIE 196 (240)
Q Consensus 117 ~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~ 196 (240)
.+.+++++++++++||++ .|.. ..+.+.+ ++..+|+++++|++|+++.++.+..+.++|.+.|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~--~d~~----~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 141 (148)
T 2b5x_A 78 PGKIKETAAEHDITQPIF--VDSD----HALTDAF----------ENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVN 141 (148)
T ss_dssp HHHHHHHHHHTTCCSCEE--ECSS----CHHHHHT----------CCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcceE--ECCc----hhHHHHh----------CCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHH
Confidence 999999999999999988 3322 2333333 56778999999999999999988888888999999
Q ss_pred HhcccC
Q psy299 197 ILGRTS 202 (240)
Q Consensus 197 ~ll~~~ 202 (240)
++++..
T Consensus 142 ~~l~~~ 147 (148)
T 2b5x_A 142 RVLAET 147 (148)
T ss_dssp HHHTTC
T ss_pred HHHhcc
Confidence 998764
No 50
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.92 E-value=2e-25 Score=176.89 Aligned_cols=152 Identities=14% Similarity=0.136 Sum_probs=120.8
Q ss_pred ccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCC-cHHHHHHHHHHHHHHhhc---CcEEEEeecCCCCCCCC
Q psy299 39 WKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGY-TGKHYKELVELDEKFRDR---GLRILAFPCNQFGGQEP 114 (240)
Q Consensus 39 ~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~-C~~~~~~L~~l~~~~~~~---~v~vi~Vs~D~~~~~~~ 114 (240)
...|.++|+|+++|.+| .+++++++||++||+||++||++ |+.++|.|++++++++++ ++.|++|++| +..
T Consensus 10 ~~~G~~~p~f~l~~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d----~~~ 84 (172)
T 2k6v_A 10 RLLNPKPVDFALEGPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVD----PER 84 (172)
T ss_dssp EEEEEEECCCEEECSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESC----TTT
T ss_pred cccCCCCCCeEEEcCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEEC----CCC
Confidence 45788999999999999 99999999999999999999997 999999999999999975 7999999998 445
Q ss_pred CCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCC-----cccccccccceEEEEcCCCCeEEeccCCC--C
Q psy299 115 GDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGG-----TLVDAIKWNFTKFIVDKNGVPVERHAANA--S 187 (240)
Q Consensus 115 ~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~-----~~~~~v~~~P~~~lID~~G~Iv~~~~~~~--~ 187 (240)
++++.+++|+++++++||++.+ ... ....+.+.++..... .....+.++|++|||| +|+|+.++.+.. +
T Consensus 85 d~~~~~~~~~~~~~~~~~~l~d--~~~-~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~ 160 (172)
T 2k6v_A 85 DPPEVADRYAKAFHPSFLGLSG--SPE-AVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEA 160 (172)
T ss_dssp CCHHHHHHHHHHHCTTEEEECC--CHH-HHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTC
T ss_pred CCHHHHHHHHHHhCCCcEEEeC--CHH-HHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCC
Confidence 7899999999999999999832 110 002233333221100 0112456789999999 999999998776 7
Q ss_pred ccchHHHHHHhc
Q psy299 188 PASLIPHIEILG 199 (240)
Q Consensus 188 ~~~l~~~L~~ll 199 (240)
+++|.+.|+++|
T Consensus 161 ~~~l~~~l~~ll 172 (172)
T 2k6v_A 161 TDRVVADLQALL 172 (172)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHhC
Confidence 788999988875
No 51
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.92 E-value=2.3e-25 Score=180.63 Aligned_cols=150 Identities=11% Similarity=0.165 Sum_probs=119.7
Q ss_pred cCCcccCCeEeecC-CC--CcccCCCCCCcEEEEEEec-CCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCC
Q psy299 40 KNAETVYDFTVKNI-KG--EDVPLSTYKGHVLVIVNVA-SRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPG 115 (240)
Q Consensus 40 ~~g~~~p~f~l~d~-~G--~~v~ls~~~gk~vlv~F~a-twCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~ 115 (240)
.+|+++|+|+++|. +| +.++|++++||++||+||+ +|||+|+.++|.|++++++|+++|+.||+||.|
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d-------- 73 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTD-------- 73 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESS--------
T ss_pred CCCCcCCCcEeecccCCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECC--------
Confidence 57999999999999 59 8999999999999999995 999999999999999999999989999999987
Q ss_pred CHHHHHHHHHhc----CcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCC----C
Q psy299 116 DADQICEFTKKK----NVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANA----S 187 (240)
Q Consensus 116 ~~e~~~~~~~~~----~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~----~ 187 (240)
+.+.+++|++++ +++||++ .|.. ..+.+.++..... . + ...|++||||++|+|++++.+.. +
T Consensus 74 ~~~~~~~~~~~~~~~~~~~fp~l--~D~~----~~~~~~ygv~~~~-~--g-~~~p~~~lID~~G~i~~~~~~~~~~~~~ 143 (186)
T 1n8j_A 74 THFTHKAWHSSSETIAKIKYAMI--GDPT----GALTRNFDNMRED-E--G-LADRATFVVDPQGIIQAIEVTAEGIGRD 143 (186)
T ss_dssp CHHHHHHHHHHCTTGGGCCSEEE--ECTT----SHHHHHTTCEETT-T--T-EECEEEEEECTTSBEEEEEEECTTBCCC
T ss_pred CHHHHHHHHHHcCcccCCceeEE--ECCc----hHHHHHhCCccCC-C--C-ceeeEEEEECCCCeEEEEEecCCCCCCC
Confidence 688999999999 8999998 3432 2334444322110 0 1 13589999999999999886533 3
Q ss_pred ccchHHHHHHhcc-------cCCCCcc
Q psy299 188 PASLIPHIEILGR-------TSAIKWN 207 (240)
Q Consensus 188 ~~~l~~~L~~ll~-------~~~i~~~ 207 (240)
.+++.+.|+++.. .-.++|.
T Consensus 144 ~~~l~~~l~~l~~~~~~p~~~~p~~w~ 170 (186)
T 1n8j_A 144 ASDLLRKIKAAQYVAAHPGEVCPAKWK 170 (186)
T ss_dssp HHHHHHHHHHHHHHHHSTTCBBCTTCC
T ss_pred HHHHHHHHHHHHHHhhcCCCccCCCCC
Confidence 5668888888774 2267885
No 52
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.92 E-value=2.8e-25 Score=185.24 Aligned_cols=151 Identities=16% Similarity=0.219 Sum_probs=117.4
Q ss_pred cccCCcccCCeEeecC--CC--CcccCCCC-CCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCC
Q psy299 38 SWKNAETVYDFTVKNI--KG--EDVPLSTY-KGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGG 111 (240)
Q Consensus 38 ~~~~g~~~p~f~l~d~--~G--~~v~ls~~-~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~ 111 (240)
.+.+|+++|+|+++|. +| +.++|+++ +||++||+|| ++|||+|+.++|.|++++++|+++++.||+||+|
T Consensus 24 ~l~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D---- 99 (221)
T 2c0d_A 24 LSLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVD---- 99 (221)
T ss_dssp --CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESS----
T ss_pred cCCCCCCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCC----
Confidence 4679999999999999 99 99999999 9999999999 9999999999999999999999989999999987
Q ss_pred CCCCCHHHHHHHHHhc-------CcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccC
Q psy299 112 QEPGDADQICEFTKKK-------NVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAA 184 (240)
Q Consensus 112 ~~~~~~e~~~~~~~~~-------~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~ 184 (240)
+.+.+++|++++ +++||++ .|.. ..+.+.++.. .. . + ...|++||||++|+|++++.+
T Consensus 100 ----~~~~~~~~~~~~~~~~g~~~~~fp~l--~D~~----~~~~~~ygv~-~~-~--g-~~~P~~~lID~~G~I~~~~~g 164 (221)
T 2c0d_A 100 ----SVYSHLAWKNMPIEKGGIGNVEFTLV--SDIN----KDISKNYNVL-YD-N--S-FALRGLFIIDKNGCVRHQTVN 164 (221)
T ss_dssp ----CHHHHHHHHHSCGGGTCCCSCSSEEE--ECTT----SHHHHHTTCE-ET-T--T-EECEEEEEECTTSBEEEEEEE
T ss_pred ----CHHHHHHHHHHhhhhcCccCCceEEE--ECCc----hHHHHHcCCc-cc-C--C-CccceEEEECCCCeEEEEEec
Confidence 788899999988 7899998 3422 2344444321 00 0 0 246899999999999998754
Q ss_pred C----CCccchHHHHHHhccc------CCCCcc
Q psy299 185 N----ASPASLIPHIEILGRT------SAIKWN 207 (240)
Q Consensus 185 ~----~~~~~l~~~L~~ll~~------~~i~~~ 207 (240)
. .+.+++.+.|+++... -.++|.
T Consensus 165 ~~~~~~~~~ell~~l~~L~~~~~~~~~cp~~W~ 197 (221)
T 2c0d_A 165 DLPIGRNVQEVLRTIDSIIHVDTSGEVCPINWK 197 (221)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHHHHCCSCC----
T ss_pred CCCCCCCHHHHHHHHHHHhhhhcCCCcCCCCCC
Confidence 3 2345688888887732 256884
No 53
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.92 E-value=3.1e-25 Score=175.09 Aligned_cols=143 Identities=20% Similarity=0.218 Sum_probs=119.8
Q ss_pred cccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCC---------
Q psy299 38 SWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQ--------- 108 (240)
Q Consensus 38 ~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~--------- 108 (240)
...+|.++|+|+++|.+|+.+++++++||++||+||++||++|+.++|.|++++++++ ++.|++|++|.
T Consensus 10 ~~~~g~~~p~~~l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~ 87 (165)
T 3ha9_A 10 SEEVLEREASFSLTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGL 87 (165)
T ss_dssp HHHHHHHHHCCCEEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTC
T ss_pred cccccCcCCCCEeecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEeccccccccccc
Confidence 4568999999999999999999999999999999999999999999999999999998 79999999871
Q ss_pred --CCCCCCCCHHHHHHHHHhcCc-ceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCC
Q psy299 109 --FGGQEPGDADQICEFTKKKNV-QFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAAN 185 (240)
Q Consensus 109 --~~~~~~~~~e~~~~~~~~~~~-~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~ 185 (240)
...+..++.+.+++|++++++ +||++ .| . ..+...+ ++..+|++||||++|+|+. .+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d-~----~~~~~~~----------~v~~~P~~~lid~~G~i~~--~g~ 148 (165)
T 3ha9_A 88 NKPGYPPPDTPEMFRKFIANYGDPSWIMV--MD-D----GSLVEKF----------NVRSIDYIVIMDKSSNVLY--AGT 148 (165)
T ss_dssp CSTTSCCCCCHHHHHHHHHHHSCTTSEEE--EC-C----SHHHHHT----------TCCSSSEEEEEETTCCEEE--EEE
T ss_pred ccccCCCCCCHHHHHHHHHHcCCCCeeEE--eC-h----HHHHHHh----------CCCCceEEEEEcCCCcEEE--eCC
Confidence 233444689999999999999 99998 33 2 2344443 5677899999999999999 455
Q ss_pred C-CccchHHHHHHhccc
Q psy299 186 A-SPASLIPHIEILGRT 201 (240)
Q Consensus 186 ~-~~~~l~~~L~~ll~~ 201 (240)
. +.++|.+.|++++++
T Consensus 149 ~~~~~~l~~~l~~l~~g 165 (165)
T 3ha9_A 149 TPSLGELESVIKSVQGG 165 (165)
T ss_dssp SCCHHHHHHHHHHC---
T ss_pred CCCHHHHHHHHHHHhcC
Confidence 5 777899999988754
No 54
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.92 E-value=1.7e-25 Score=177.65 Aligned_cols=129 Identities=12% Similarity=0.094 Sum_probs=104.9
Q ss_pred ccccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCC
Q psy299 35 ADDSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQE 113 (240)
Q Consensus 35 ~~~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~ 113 (240)
....+.+|.++|+|+++|.+|+.++|++++||++||+|| ++|||+|+.++|.|++++++ +++.|++||.|
T Consensus 16 ~~~~l~~G~~aP~f~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d------ 86 (166)
T 3p7x_A 16 KGQQINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISAD------ 86 (166)
T ss_dssp ESCCCCTTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESS------
T ss_pred ecccCCCCCCCCCeEEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECC------
Confidence 345678999999999999999999999999999999999 78999999999999999888 57999999976
Q ss_pred CCCHHHHHHHHHhcCc-ceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEecc
Q psy299 114 PGDADQICEFTKKKNV-QFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHA 183 (240)
Q Consensus 114 ~~~~e~~~~~~~~~~~-~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~ 183 (240)
+++.+++|++++++ +||++ .|... ..+...++..... .+. ..|++||||++|+|++++.
T Consensus 87 --~~~~~~~~~~~~~~~~~~~l--~D~~~---~~~~~~~gv~~~~---~g~-~~p~~~liD~~G~i~~~~~ 146 (166)
T 3p7x_A 87 --LPFAQKRWCASAGLDNVITL--SDHRD---LSFGENYGVVMEE---LRL-LARAVFVLDADNKVVYKEI 146 (166)
T ss_dssp --CHHHHHHHHHHHTCSSCEEE--ECTTT---CHHHHHHTCEETT---TTE-ECCEEEEECTTCBEEEEEE
T ss_pred --CHHHHHHHHHHcCCCceEEc--cCCch---hHHHHHhCCcccc---CCc-eeeEEEEECCCCeEEEEEE
Confidence 79999999999999 89999 34311 2344444332110 000 2689999999999999854
No 55
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.92 E-value=4e-25 Score=169.60 Aligned_cols=138 Identities=16% Similarity=0.237 Sum_probs=115.5
Q ss_pred ccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCC
Q psy299 37 DSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGD 116 (240)
Q Consensus 37 ~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~ 116 (240)
.....|..+|+|++++.+|+.+++++ +||++||.||++||++|+.++|.|+++++++++.++.+++|++| ...++
T Consensus 7 ~~~~~g~~~p~~~l~~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d----~~~~~ 81 (145)
T 3erw_A 7 AEEKQPAVPAVFLMKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLV----NSEQN 81 (145)
T ss_dssp -----CCSCCEEEEECTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECG----GGSSC
T ss_pred ccccCCCcCCCceeecCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEcc----CCcCC
Confidence 45678999999999999999999999 99999999999999999999999999999999778999999987 33458
Q ss_pred HHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHH
Q psy299 117 ADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHI 195 (240)
Q Consensus 117 ~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L 195 (240)
.+.+++++++++++||++ .|.. ..+.+.+ ++..+|+++|||++|+|+.++.+..+.+.|.+.|
T Consensus 82 ~~~~~~~~~~~~~~~~~~--~d~~----~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 82 QQVVEDFIKANKLTFPIV--LDSK----GELMKEY----------HIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp HHHHHHHHHHTTCCSCEE--ECSS----SHHHHHT----------TCCEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCceeEE--EcCc----hhHHHhc----------CcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 999999999999999998 3322 2344443 5677799999999999999998888877776655
No 56
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.92 E-value=4.5e-25 Score=173.36 Aligned_cols=133 Identities=15% Similarity=0.166 Sum_probs=109.5
Q ss_pred ccCCcccCCeEeecCCCCcccCCCCCCc-EEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCC
Q psy299 39 WKNAETVYDFTVKNIKGEDVPLSTYKGH-VLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGD 116 (240)
Q Consensus 39 ~~~g~~~p~f~l~d~~G~~v~ls~~~gk-~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~ 116 (240)
+.+|.++|+|+++|.+|+.+++++++|| ++||+|| ++||++|+.++|.|++++++|+++++.+++|++| +
T Consensus 9 ~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d--------~ 80 (160)
T 1xvw_A 9 LNVGATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVG--------P 80 (160)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESC--------C
T ss_pred CCCCCCCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCC--------C
Confidence 7899999999999999999999999998 9999998 9999999999999999999999889999999987 7
Q ss_pred HHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccc--eEEEEcCCCCeEEeccCCCCcc
Q psy299 117 ADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNF--TKFIVDKNGVPVERHAANASPA 189 (240)
Q Consensus 117 ~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P--~~~lID~~G~Iv~~~~~~~~~~ 189 (240)
.+.+++|+++++++||++. |.. ....+...++..... ..+| ++||||++|+|+.++.+..+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~--d~~--~~~~~~~~~~v~~~~------~~~p~~~~~lid~~G~i~~~~~g~~~~~ 145 (160)
T 1xvw_A 81 PPTHKIWATQSGFTFPLLS--DFW--PHGAVSQAYGVFNEQ------AGIANRGTFVVDRSGIIRFAEMKQPGEV 145 (160)
T ss_dssp HHHHHHHHHHHTCCSCEEE--CTT--TTTHHHHHTTCEETT------TTEECSEEEEECTTSBEEEEEECCTTCC
T ss_pred HHHHHHHHHhcCCCceEEe--cCC--cChHHHHHcCCcccc------CCCeeeeEEEECCCCeEEEEEecCCCCC
Confidence 8999999999999999983 320 112344444221100 0446 8999999999999887765443
No 57
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.92 E-value=6.1e-25 Score=178.43 Aligned_cols=162 Identities=14% Similarity=0.152 Sum_probs=121.1
Q ss_pred cCCcccCCeEeecC--CC--CcccCCCC-CCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCC
Q psy299 40 KNAETVYDFTVKNI--KG--EDVPLSTY-KGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQE 113 (240)
Q Consensus 40 ~~g~~~p~f~l~d~--~G--~~v~ls~~-~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~ 113 (240)
++|+++|+|++++. +| +.++|+++ +||++||+|| ++|||+|+.++|.|++++++|+++++.||+||+|
T Consensus 1 ~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d------ 74 (192)
T 2h01_A 1 AFQGQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVD------ 74 (192)
T ss_dssp CCSSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESS------
T ss_pred CCCCcCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeC------
Confidence 36899999999999 99 99999999 9999999999 9999999999999999999999889999999987
Q ss_pred CCCHHHHHHHHHhc-------CcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCC
Q psy299 114 PGDADQICEFTKKK-------NVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANA 186 (240)
Q Consensus 114 ~~~~e~~~~~~~~~-------~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~ 186 (240)
+.+.+++|++++ +++||++ .|.. ..+.+.++.... . + ..+|++||||++|+|++++.+..
T Consensus 75 --~~~~~~~~~~~~~~~~~~~~~~~~~l--~D~~----~~~~~~~gv~~~--~--g-~~~P~~~liD~~G~i~~~~~g~~ 141 (192)
T 2h01_A 75 --SKFTHLAWKKTPLSQGGIGNIKHTLI--SDIS----KSIARSYDVLFN--E--S-VALRAFVLIDKQGVVQHLLVNNL 141 (192)
T ss_dssp --CHHHHHHHHTSCGGGTCCCSCSSEEE--ECTT----SHHHHHTTCEET--T--T-EECCEEEEECTTSBEEEEEEGGG
T ss_pred --CHHHHHHHHHhHHhhCCccCCCcCeE--ECCc----HHHHHHhCCcCc--C--C-ceeeEEEEEcCCCEEEEEEeCCC
Confidence 788999999988 8899998 3322 234444432110 0 0 14689999999999999886532
Q ss_pred ----CccchHHHHHHhcc------cCCCCcceeEEEEcCCCCee
Q psy299 187 ----SPASLIPHIEILGR------TSAIKWNFTKFIVDKNGAPV 220 (240)
Q Consensus 187 ----~~~~l~~~L~~ll~------~~~i~~~~~~~~i~~~~~~~ 220 (240)
+.+++.+.|+++.. .-.++|.-..-+|.+.-..+
T Consensus 142 ~~~~~~~~l~~~l~~l~~~~~~~~~cp~~w~~~~~~~~~~~~~~ 185 (192)
T 2h01_A 142 ALGRSVDEILRLIDALQHHEKYGDVCPANWQKGKESMKPSEEGV 185 (192)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHCCCCCSSCCCC-----------
T ss_pred CCCCCHHHHHHHHHHHhhhhhcCCCccCCCCCCCccccCCchhh
Confidence 34568888888763 23678876665555444333
No 58
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.92 E-value=4.8e-25 Score=171.79 Aligned_cols=143 Identities=22% Similarity=0.256 Sum_probs=123.1
Q ss_pred cccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCH
Q psy299 38 SWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDA 117 (240)
Q Consensus 38 ~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~ 117 (240)
.+.+|.++|+|+++|.+|+.+++++++ |++||+||++||++|+.++|.|+++++++ ++.+++|++| ..++.
T Consensus 4 ~l~~g~~~p~f~l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d-----~~~~~ 74 (154)
T 3ia1_A 4 AVKPGEPLPDFLLLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISRE-----PRDTR 74 (154)
T ss_dssp CCCSBEECCCCCEECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEECC-----TTCCH
T ss_pred cCCCCCcCCceEEECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeCC-----CcccH
Confidence 568999999999999999999999999 99999999999999999999999999999 6999999985 23689
Q ss_pred HHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHH
Q psy299 118 DQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEI 197 (240)
Q Consensus 118 e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ 197 (240)
+.+++++++++++||++ .|.. .....+...+ ++..+|++||||++|+|+.++.+..+.++|.+.|++
T Consensus 75 ~~~~~~~~~~~~~~~~~--~d~~-~~~~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 141 (154)
T 3ia1_A 75 EVVLEYMKTYPRFIPLL--ASDR-DRPHEVAARF----------KVLGQPWTFVVDREGKVVALFAGRAGREALLDALLL 141 (154)
T ss_dssp HHHHHHHTTCTTEEECB--CCSS-CCHHHHHTTS----------SBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcccc--cccc-cchHHHHHHh----------CCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHh
Confidence 99999999999999998 3311 1222233222 566789999999999999999998899999999999
Q ss_pred hcccC
Q psy299 198 LGRTS 202 (240)
Q Consensus 198 ll~~~ 202 (240)
+++..
T Consensus 142 ~~~~~ 146 (154)
T 3ia1_A 142 AGADL 146 (154)
T ss_dssp TTCCC
T ss_pred ccCcc
Confidence 98765
No 59
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.92 E-value=8.5e-25 Score=179.15 Aligned_cols=153 Identities=14% Similarity=0.172 Sum_probs=122.5
Q ss_pred ccccCCcccCCeEeecC--CC--CcccCCCCCCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCC
Q psy299 37 DSWKNAETVYDFTVKNI--KG--EDVPLSTYKGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGG 111 (240)
Q Consensus 37 ~~~~~g~~~p~f~l~d~--~G--~~v~ls~~~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~ 111 (240)
..+.+|.++|+|++++. +| +.++|++++||++||+|| ++|||+|+.++|.|++++++|+++++.||+||+|
T Consensus 4 ~~~~~G~~aP~f~l~~~~~~g~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D---- 79 (202)
T 1uul_A 4 GEAEDLHPAPDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMD---- 79 (202)
T ss_dssp CCCCTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS----
T ss_pred ccccCCCcCCCcEeeeeecCCCccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC----
Confidence 45679999999999998 78 899999999999999999 9999999999999999999999889999999987
Q ss_pred CCCCCHHHHHHHHHhc-------CcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccC
Q psy299 112 QEPGDADQICEFTKKK-------NVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAA 184 (240)
Q Consensus 112 ~~~~~~e~~~~~~~~~-------~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~ 184 (240)
+.+.+++|++++ +++||++ .|.. ..+.+.++...... + ..+|++||||++|+|+.++.+
T Consensus 80 ----~~~~~~~~~~~~~~~~~~~~~~~p~l--~D~~----~~~~~~ygv~~~~~---g-~~~P~~~lid~~G~i~~~~~g 145 (202)
T 1uul_A 80 ----SEYSHLAWTSIERKRGGLGQMNIPIL--ADKT----KCIMKSYGVLKEED---G-VAYRGLFIIDPKQNLRQITVN 145 (202)
T ss_dssp ----CHHHHHHHHHSCGGGTCCCSCSSCEE--ECTT----CHHHHHHTCEETTT---T-EECEEEEEECTTSBEEEEEEE
T ss_pred ----CHHHHHHHHHHHHhhCCCCCCceeEE--ECCc----hHHHHHcCCccCCC---C-ceeeEEEEECCCCEEEEEEeC
Confidence 688899999988 8899998 3322 23444443221100 0 156899999999999998755
Q ss_pred CCC----ccchHHHHHHhcc------cCCCCcc
Q psy299 185 NAS----PASLIPHIEILGR------TSAIKWN 207 (240)
Q Consensus 185 ~~~----~~~l~~~L~~ll~------~~~i~~~ 207 (240)
... .+++.+.|+++.. .-.++|.
T Consensus 146 ~~~~~~~~~ell~~l~~l~~~~~~~~~~p~~w~ 178 (202)
T 1uul_A 146 DLPVGRDVDEALRLVKAFQFVEKHGEVCPANWK 178 (202)
T ss_dssp CTTBCCCHHHHHHHHHHHHHHHHHSCBBCTTCC
T ss_pred CCCCCCCHHHHHHHHHHhhhhhhcCCccCCCcC
Confidence 433 3668888888772 3367886
No 60
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.92 E-value=7.3e-25 Score=179.49 Aligned_cols=157 Identities=11% Similarity=0.085 Sum_probs=117.4
Q ss_pred cccCCccc--CCeEeecCCCCcccCCCCCCcEEEEEEecCCCCC-cHHHHHHHHHHHHHHhhc---CcEEEEeecCCCCC
Q psy299 38 SWKNAETV--YDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGY-TGKHYKELVELDEKFRDR---GLRILAFPCNQFGG 111 (240)
Q Consensus 38 ~~~~g~~~--p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~-C~~~~~~L~~l~~~~~~~---~v~vi~Vs~D~~~~ 111 (240)
....|.++ |+|+++|.+|+.+++++++||++||+||++|||+ |+.++|.|++++++++++ ++.|++||+|
T Consensus 12 ~~~~g~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D---- 87 (200)
T 2b7k_A 12 NRGYGKPSLGGPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCD---- 87 (200)
T ss_dssp ----CCCCCCCCCEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESC----
T ss_pred HhccCCCCcCCCEEEEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECC----
Confidence 34567775 9999999999999999999999999999999997 999999999999999864 7999999998
Q ss_pred CCCCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcC-C-----cccccccccceEEEEcCCCCeEEeccCC
Q psy299 112 QEPGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQG-G-----TLVDAIKWNFTKFIVDKNGVPVERHAAN 185 (240)
Q Consensus 112 ~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~-~-----~~~~~v~~~P~~~lID~~G~Iv~~~~~~ 185 (240)
+..++++.+++|+++++.+|+.+.. ..+....+...++.... . .....+.+.|++||||++|+|+.++.+.
T Consensus 88 ~~~d~~~~~~~~~~~~~~~~~~l~~---~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~ 164 (200)
T 2b7k_A 88 PARDSPAVLKEYLSDFHPSILGLTG---TFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRN 164 (200)
T ss_dssp TTTCCHHHHHHHHTTSCTTCEEEEC---CHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTT
T ss_pred CCCCCHHHHHHHHHHcCCCceEEeC---CHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCC
Confidence 4557899999999999999987721 00111122233322100 0 0011233567899999999999998877
Q ss_pred CCccchHHHHHHhccc
Q psy299 186 ASPASLIPHIEILGRT 201 (240)
Q Consensus 186 ~~~~~l~~~L~~ll~~ 201 (240)
.+++.+.+.|.++|+.
T Consensus 165 ~~~~~~~~~i~~~l~~ 180 (200)
T 2b7k_A 165 YDEKTGVDKIVEHVKS 180 (200)
T ss_dssp CCTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 7777788888777754
No 61
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.92 E-value=1.4e-24 Score=171.92 Aligned_cols=142 Identities=10% Similarity=0.095 Sum_probs=111.6
Q ss_pred ccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEec-CCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCC
Q psy299 37 DSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVA-SRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPG 115 (240)
Q Consensus 37 ~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~a-twCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~ 115 (240)
..+..|+++|+|+++|.+|+.+++++++||++||+||+ +||++|+.++|.|++++++| .++.|++||.|
T Consensus 14 ~~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d-------- 83 (163)
T 1psq_A 14 KQLQVGDKALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMD-------- 83 (163)
T ss_dssp CCCCTTSBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESS--------
T ss_pred CCCCCCCCCCCEEEEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECC--------
Confidence 35679999999999999999999999999999999995 99999999999999999999 58999999987
Q ss_pred CHHHHHHHHHhcCc-ceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCC---Cc--c
Q psy299 116 DADQICEFTKKKNV-QFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANA---SP--A 189 (240)
Q Consensus 116 ~~e~~~~~~~~~~~-~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~---~~--~ 189 (240)
+++.+++|++++++ +||++ .|. ....+.+.++..... .++ ..|++||||++|+|++++.+.. .+ +
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l--~D~---~~~~~~~~~gv~~~~---~g~-~~p~~~liD~~G~i~~~~~g~~~~~~~~~~ 154 (163)
T 1psq_A 84 LPFAQKRWCGAEGLDNAIML--SDY---FDHSFGRDYALLINE---WHL-LARAVFVLDTDNTIRYVEYVDNINSEPNFE 154 (163)
T ss_dssp CHHHHHHHHHHHTCTTSEEE--ECT---TTCHHHHHHTCBCTT---TCS-BCCEEEEECTTCBEEEEEECSBTTSCCCHH
T ss_pred CHHHHHHHHHhcCCCCcEEe--cCC---chhHHHHHhCCcccc---CCc-eEEEEEEEcCCCeEEEEEecCCcCCCCCHH
Confidence 78899999999999 99998 341 112344444332110 011 2489999999999999885432 12 4
Q ss_pred chHHHHHH
Q psy299 190 SLIPHIEI 197 (240)
Q Consensus 190 ~l~~~L~~ 197 (240)
++.+.|++
T Consensus 155 ~~l~~l~~ 162 (163)
T 1psq_A 155 AAIAAAKA 162 (163)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 46666654
No 62
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.92 E-value=1.9e-24 Score=163.78 Aligned_cols=134 Identities=15% Similarity=0.191 Sum_probs=116.8
Q ss_pred CCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHH
Q psy299 41 NAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQI 120 (240)
Q Consensus 41 ~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~ 120 (240)
.|.++|+|++++.+|+.+++++++||++||.||++||++|+.++|.|++++++++ ++.+++|++| ++.+.+
T Consensus 1 ~~~~~p~~~~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~-------~~~~~~ 71 (136)
T 1zzo_A 1 TVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGL-------DQVPAM 71 (136)
T ss_dssp CCCGGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS-------SCHHHH
T ss_pred CCCCCCCcccccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCC-------CCHHHH
Confidence 4678999999999999999999999999999999999999999999999999998 7999999987 579999
Q ss_pred HHHHHhcCc-ceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 121 CEFTKKKNV-QFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 121 ~~~~~~~~~-~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
+++++++++ +||++. |.. ..+.+.+ ++..+|+++++|++|+++ ++.+..+.++|.+.|++++
T Consensus 72 ~~~~~~~~~~~~~~~~--d~~----~~~~~~~----------~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 72 QEFVNKYPVKTFTQLA--DTD----GSVWANF----------GVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp HHHHHHTTCTTSEEEE--CTT----CHHHHHT----------TCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC
T ss_pred HHHHHHcCCCceEEEE--cCC----cHHHHHc----------CCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHHh
Confidence 999999999 999883 322 2333333 566779999999999999 8888888888999999987
Q ss_pred c
Q psy299 200 R 200 (240)
Q Consensus 200 ~ 200 (240)
+
T Consensus 135 ~ 135 (136)
T 1zzo_A 135 S 135 (136)
T ss_dssp -
T ss_pred c
Confidence 5
No 63
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.92 E-value=7.7e-25 Score=173.80 Aligned_cols=132 Identities=11% Similarity=0.099 Sum_probs=106.0
Q ss_pred ccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCC
Q psy299 37 DSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPG 115 (240)
Q Consensus 37 ~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~ 115 (240)
..+..|.++|+|+++|.+|+.++|++++||++||+|| ++|||+|..++|.|++++++| .++.||+||.|
T Consensus 15 ~~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d-------- 84 (165)
T 1q98_A 15 HFPQVGEIVENFILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISAD-------- 84 (165)
T ss_dssp CCCCTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESS--------
T ss_pred ccCCCCCCCCCeEEECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCC--------
Confidence 3567999999999999999999999999999999999 899999999999999999999 58999999986
Q ss_pred CHHHHHHHHHhcCc-ceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccC
Q psy299 116 DADQICEFTKKKNV-QFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAA 184 (240)
Q Consensus 116 ~~e~~~~~~~~~~~-~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~ 184 (240)
+++.+++|++++++ +||++. |.. ...+...++.........+ .+.|++||||++|+|++++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~--D~~---~~~~~~~~gv~~~~~~~~g-~~~p~~~liD~~G~i~~~~~~ 148 (165)
T 1q98_A 85 LPFAQARFCGAEGIENAKTVS--TFR---NHALHSQLGVDIQTGPLAG-LTSRAVIVLDEQNNVLHSQLV 148 (165)
T ss_dssp CHHHHTTCTTTTTCTTEEEEE--CTT---CTHHHHHTTCEECSSTTTT-SBCCEEEEECTTSBEEEEEEC
T ss_pred CHHHHHHHHHHcCCCceEEee--ccc---cchHHHHhCceecccccCC-ccceeEEEEcCCCEEEEEEeC
Confidence 78899999999999 799983 331 1234444433211000001 135899999999999998864
No 64
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.92 E-value=1.1e-24 Score=177.62 Aligned_cols=141 Identities=10% Similarity=0.112 Sum_probs=115.9
Q ss_pred cCCcccCCeEeecC--CCC---cccCCCC-CCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCC
Q psy299 40 KNAETVYDFTVKNI--KGE---DVPLSTY-KGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQ 112 (240)
Q Consensus 40 ~~g~~~p~f~l~d~--~G~---~v~ls~~-~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~ 112 (240)
.+|.++|+|+++|. +|+ .++++++ +||++||+|| ++|||+|+.++|.|++++++|+++++.|++|++|
T Consensus 2 ~~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d----- 76 (198)
T 1zof_A 2 VVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSID----- 76 (198)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESS-----
T ss_pred CCCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECC-----
Confidence 57999999999999 998 9999999 9999999999 9999999999999999999999989999999987
Q ss_pred CCCCHHHHHHHHHh-------cCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCC
Q psy299 113 EPGDADQICEFTKK-------KNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAAN 185 (240)
Q Consensus 113 ~~~~~e~~~~~~~~-------~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~ 185 (240)
+++.+++|+++ ++++||++ .|.. ..+.+.++..... + ..+|++||||++|+|+.++.+.
T Consensus 77 ---~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~----~~~~~~~~v~~~~--g---~~~P~~~lid~~G~i~~~~~g~ 142 (198)
T 1zof_A 77 ---SEQVHFAWKNTPVEKGGIGQVSFPMV--ADIT----KSISRDYDVLFEE--A---IALRGAFLIDKNMKVRHAVIND 142 (198)
T ss_dssp ---CHHHHHHHHTSCGGGTCCCCCSSCEE--ECTT----SHHHHHTTCEETT--T---EECEEEEEEETTTEEEEEEEES
T ss_pred ---CHHHHHHHHHhhhhcccccCceeEEE--ECCc----hHHHHHhCCcccC--C---cccceEEEECCCCEEEEEEecC
Confidence 68899999998 89999998 3322 2344443221100 0 1569999999999999988664
Q ss_pred C----CccchHHHHHHhc
Q psy299 186 A----SPASLIPHIEILG 199 (240)
Q Consensus 186 ~----~~~~l~~~L~~ll 199 (240)
. +.++|.+.|+++.
T Consensus 143 ~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 143 LPLGRNADEMLRMVDALL 160 (198)
T ss_dssp SSCCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHH
Confidence 4 3556888888876
No 65
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.92 E-value=2.7e-25 Score=183.92 Aligned_cols=153 Identities=12% Similarity=0.131 Sum_probs=119.7
Q ss_pred ccccCCcccCCeEeecC---CCCcccCCCCCCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCC
Q psy299 37 DSWKNAETVYDFTVKNI---KGEDVPLSTYKGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQ 112 (240)
Q Consensus 37 ~~~~~g~~~p~f~l~d~---~G~~v~ls~~~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~ 112 (240)
..+.+|.++|+|++++. +|+.++|++++||++||+|| ++|||+|+.++|.|++++++|+++++.||+||+|
T Consensus 17 ~~~~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D----- 91 (211)
T 2pn8_A 17 NLYFQSMPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD----- 91 (211)
T ss_dssp --CCSSCBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS-----
T ss_pred ccCCCCCcCCCeEeecccCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC-----
Confidence 45679999999999985 46899999999999999999 9999999999999999999999989999999987
Q ss_pred CCCCHHHHHHHHHhc-------CcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCC
Q psy299 113 EPGDADQICEFTKKK-------NVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAAN 185 (240)
Q Consensus 113 ~~~~~e~~~~~~~~~-------~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~ 185 (240)
+++.+++|++++ +++||++ .|.. ..+.+.++..... . + ..+|++||||++|+|++++.+.
T Consensus 92 ---~~~~~~~~~~~~~~~~g~~~~~fp~l--~D~~----~~~~~~ygv~~~~-~--g-~~~p~~~lID~~G~I~~~~~g~ 158 (211)
T 2pn8_A 92 ---SQFTHLAWINTPRRQGGLGPIRIPLL--SDLT----HQISKDYGVYLED-S--G-HTLRGLFIIDDKGILRQITLND 158 (211)
T ss_dssp ---CHHHHHHHHTSCGGGTCCCSCSSCEE--ECTT----SHHHHHTTCEETT-T--T-EECEEEEEECTTSBEEEEEEEC
T ss_pred ---CHHHHHHHHHHhhhccCccCCceEEE--ECCc----hHHHHHcCCcccC-C--C-cccceEEEECCCCEEEEEEecC
Confidence 788899999988 7899998 3432 2344444321110 0 0 1368999999999999987543
Q ss_pred C----CccchHHHHHHhcc------cCCCCcc
Q psy299 186 A----SPASLIPHIEILGR------TSAIKWN 207 (240)
Q Consensus 186 ~----~~~~l~~~L~~ll~------~~~i~~~ 207 (240)
. +.+++.+.|+++.. .-+++|.
T Consensus 159 ~~~~~~~~ell~~l~~l~~~~~~~~~~p~~w~ 190 (211)
T 2pn8_A 159 LPVGRSVDETLRLVQAFQYTDKHGEVCPAGWK 190 (211)
T ss_dssp TTBCCCHHHHHHHHHHHHHHHHHCCBBCTTCC
T ss_pred CCCCCCHHHHHHHHHHhhhcccCCcccCCCCC
Confidence 2 34568888888763 2267885
No 66
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.92 E-value=8.7e-25 Score=193.89 Aligned_cols=151 Identities=11% Similarity=0.195 Sum_probs=129.3
Q ss_pred cccccccCCcccCCeE-----eecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCC
Q psy299 34 MADDSWKNAETVYDFT-----VKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQ 108 (240)
Q Consensus 34 ~~~~~~~~g~~~p~f~-----l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~ 108 (240)
.....+.+|.++|+|+ ++|.+|+.+++++++||++||+||++||++|+.++|.|++++++|+++++.||+|++|.
T Consensus 46 ~~~~~l~vG~~aPdF~~~~~wL~d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~ 125 (352)
T 2hyx_A 46 DGAAQLESCGTAPDLKGITGWLNTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPE 125 (352)
T ss_dssp BSCSSCCCCCBCCCCCSCCEEESSGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCS
T ss_pred hcccccCCCCcCCCccccccccCCCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCc
Confidence 3345678999999999 99999999999999999999999999999999999999999999999899999999873
Q ss_pred CCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCc
Q psy299 109 FGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASP 188 (240)
Q Consensus 109 ~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~ 188 (240)
+ ...++++.+++|+++++++||++ .|.. ..+.+.+ .+..+|++||||++|+|+.++.+..+.
T Consensus 126 ~--~~~d~~~~~~~~~~~~~l~fpv~--~D~~----~~l~~~y----------gV~~~Pt~~lID~~G~Iv~~~~G~~~~ 187 (352)
T 2hyx_A 126 Y--AFEKVPGNVAKGAANLGISYPIA--LDNN----YATWTNY----------RNRYWPAEYLIDATGTVRHIKFGEGDY 187 (352)
T ss_dssp S--GGGGCHHHHHHHHHHHTCCSCEE--ECTT----SHHHHHT----------TCCEESEEEEECTTSBEEEEEESBCCH
T ss_pred c--cccCCHHHHHHHHHHcCCCccEE--eCCc----HHHHHHc----------CCCccCEEEEEeCCCeEEEEEcCCCCH
Confidence 2 12358999999999999999988 3322 2333333 566779999999999999999888888
Q ss_pred cchHHHHHHhcccC
Q psy299 189 ASLIPHIEILGRTS 202 (240)
Q Consensus 189 ~~l~~~L~~ll~~~ 202 (240)
++|.+.|+++|++.
T Consensus 188 ~~l~~~I~~lL~e~ 201 (352)
T 2hyx_A 188 NVTETLVRQLLNDA 201 (352)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhc
Confidence 88999999998654
No 67
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.92 E-value=1.1e-24 Score=180.46 Aligned_cols=152 Identities=12% Similarity=0.141 Sum_probs=121.9
Q ss_pred ccccCCcccCCeEeecC--CC--CcccCCCC-CCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCC
Q psy299 37 DSWKNAETVYDFTVKNI--KG--EDVPLSTY-KGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFG 110 (240)
Q Consensus 37 ~~~~~g~~~p~f~l~d~--~G--~~v~ls~~-~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~ 110 (240)
..+.+|.++|+|++++. +| +.++|+++ +||++||+|| ++|||+|+.++|.|++++++|+++++.||+||+|
T Consensus 19 ~~l~~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D--- 95 (213)
T 2i81_A 19 SPTYVGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVD--- 95 (213)
T ss_dssp -CCCBTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESS---
T ss_pred ccccCCCcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCC---
Confidence 45679999999999999 89 89999999 9999999999 9999999999999999999999889999999987
Q ss_pred CCCCCCHHHHHHHHHhc-------CcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEecc
Q psy299 111 GQEPGDADQICEFTKKK-------NVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHA 183 (240)
Q Consensus 111 ~~~~~~~e~~~~~~~~~-------~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~ 183 (240)
+++.+++|++++ +++||++ .|.. ..+.+.++.... . + ..+|++||||++|+|++++.
T Consensus 96 -----~~~~~~~~~~~~~~~~g~~~~~fp~l--~D~~----~~~~~~ygv~~~--~--g-~~~p~~~lID~~G~i~~~~~ 159 (213)
T 2i81_A 96 -----SKYTHLAWKKTPLAKGGIGNIKHTLL--SDIT----KSISKDYNVLFD--D--S-VSLRAFVLIDMNGIVQHLLV 159 (213)
T ss_dssp -----CHHHHHHHHSSCGGGTCCCSCSSEEE--ECTT----SHHHHHTTCEET--T--T-EECEEEEEECTTSBEEEEEE
T ss_pred -----CHHHHHHHHHHHHhhCCccCCCceEE--ECCc----hHHHHHhCCccc--c--C-CcccEEEEECCCCEEEEEEe
Confidence 788999999988 8899998 3322 234444432210 0 0 15689999999999999875
Q ss_pred CCC----CccchHHHHHHhcc------cCCCCcc
Q psy299 184 ANA----SPASLIPHIEILGR------TSAIKWN 207 (240)
Q Consensus 184 ~~~----~~~~l~~~L~~ll~------~~~i~~~ 207 (240)
+.. +.+++.+.|+++.. +-.++|.
T Consensus 160 ~~~~~~~~~~ell~~l~~l~~~~~~~~~cp~~w~ 193 (213)
T 2i81_A 160 NNLAIGRSVDEILRIIDAIQHHEKYGDVCPANWQ 193 (213)
T ss_dssp ECTTCCCCHHHHHHHHHHHHHHHHHCCBCCTTCC
T ss_pred cCCCCCCCHHHHHHHHHHHHhhhhcCCCcCCCCC
Confidence 433 35668888888773 2267884
No 68
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.91 E-value=2.7e-24 Score=163.42 Aligned_cols=132 Identities=14% Similarity=0.270 Sum_probs=113.9
Q ss_pred cccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHH
Q psy299 43 ETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICE 122 (240)
Q Consensus 43 ~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~ 122 (240)
.++|+|+++|.+|+.+++++++||++||.||++||++|+.++|.|++++++++ ++.+++|++| ++.+.+++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~-------~~~~~~~~ 72 (136)
T 1lu4_A 2 DERLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATR-------ADVGAMQS 72 (136)
T ss_dssp GGGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS-------SCHHHHHH
T ss_pred CCCCCeEeecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcC-------CCHHHHHH
Confidence 46899999999999999999999999999999999999999999999999998 7999999987 47999999
Q ss_pred HHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEecc---CCCCccchHHHHHHhc
Q psy299 123 FTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHA---ANASPASLIPHIEILG 199 (240)
Q Consensus 123 ~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~---~~~~~~~l~~~L~~ll 199 (240)
++++++++||++. |.. ..+.+.+ ++..+|+++++|++|+++ ++. +..+.++|.+.|++++
T Consensus 73 ~~~~~~~~~~~~~--d~~----~~~~~~~----------~i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 73 FVSKYNLNFTNLN--DAD----GVIWARY----------NVPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp HHHHHTCCSEEEE--CTT----SHHHHHT----------TCCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred HHHHcCCCceEEE--CCc----hhHHHhc----------CCCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 9999999999983 322 2233333 566779999999999999 888 7788888999998876
Q ss_pred c
Q psy299 200 R 200 (240)
Q Consensus 200 ~ 200 (240)
+
T Consensus 136 ~ 136 (136)
T 1lu4_A 136 S 136 (136)
T ss_dssp -
T ss_pred C
Confidence 3
No 69
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.91 E-value=2.6e-24 Score=172.44 Aligned_cols=150 Identities=9% Similarity=0.019 Sum_probs=112.4
Q ss_pred ccccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCC-CCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCC
Q psy299 35 ADDSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASR-CGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQE 113 (240)
Q Consensus 35 ~~~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atw-Cp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~ 113 (240)
....+.+|.++|+|+++|.+|+.+++++++||++||+||++| |++|+.++|.|++++++ .++.||+|+.|
T Consensus 14 ~~~~l~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D------ 84 (175)
T 1xvq_A 14 VGELPAVGSPAPAFTLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSKD------ 84 (175)
T ss_dssp SSCCCCTTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESS------
T ss_pred cCCCCCcCCcCCCeEEECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEECC------
Confidence 334567999999999999999999999999999999999999 99999999999999998 57999999987
Q ss_pred CCCHHHHHHHHHhcCc-ceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccC--CCCccc
Q psy299 114 PGDADQICEFTKKKNV-QFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAA--NASPAS 190 (240)
Q Consensus 114 ~~~~e~~~~~~~~~~~-~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~--~~~~~~ 190 (240)
+++.+++|++++++ +||++ .|.. ..+.+.++.........+ ...|++||||++|+|++++.+ .....+
T Consensus 85 --~~~~~~~~~~~~~~~~~~~l--~D~~----~~~~~~~gv~~~~~~~~g-~~~p~~~lid~~G~I~~~~~g~~~~~~~~ 155 (175)
T 1xvq_A 85 --LPFAQKRFCGAEGTENVMPA--SAFR----DSFGEDYGVTIADGPMAG-LLARAIVVIGADGNVAYTELVPEIAQEPN 155 (175)
T ss_dssp --CHHHHTTCC------CEEEE--ECTT----SSHHHHTTCBBCSSTTTT-SBCSEEEEECTTSBEEEEEECSBTTCCCC
T ss_pred --CHHHHHHHHHHcCCCCceEe--eCCH----HHHHHHhCCcccccccCC-cccceEEEECCCCeEEEEEECCCcCCCCC
Confidence 78889999999999 89998 3433 224444433211000001 134899999999999998853 334456
Q ss_pred hHHHHHHhcccC
Q psy299 191 LIPHIEILGRTS 202 (240)
Q Consensus 191 l~~~L~~ll~~~ 202 (240)
+.+.|+.+.+++
T Consensus 156 ~~~~l~~l~~~~ 167 (175)
T 1xvq_A 156 YEAALAALGATS 167 (175)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHhhc
Confidence 888888877664
No 70
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.91 E-value=2e-24 Score=179.87 Aligned_cols=137 Identities=12% Similarity=0.149 Sum_probs=107.4
Q ss_pred ccccccCCcccCCeEeecC---CCCcccCCCCCCcEEEEEEec-CCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCC
Q psy299 35 ADDSWKNAETVYDFTVKNI---KGEDVPLSTYKGHVLVIVNVA-SRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFG 110 (240)
Q Consensus 35 ~~~~~~~g~~~p~f~l~d~---~G~~v~ls~~~gk~vlv~F~a-twCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~ 110 (240)
....+.+|.++|+|++++. +|+.++|++++||++||+||+ +||++|+.++|.|++++++|+++|+.||+||+|
T Consensus 36 ~~~~l~~G~~aP~f~l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D--- 112 (222)
T 3ztl_A 36 STMVLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTD--- 112 (222)
T ss_dssp ----CCSSEECCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS---
T ss_pred ccccccCCCCCCCeEEecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC---
Confidence 3346789999999999965 559999999999999999996 999999999999999999999989999999987
Q ss_pred CCCCCCHHHHHHHHHhc-------CcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEecc
Q psy299 111 GQEPGDADQICEFTKKK-------NVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHA 183 (240)
Q Consensus 111 ~~~~~~~e~~~~~~~~~-------~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~ 183 (240)
+.+..+++.+.+ +++||++. |.. ..+...++..... .+ ..+|++||||++|+|++++.
T Consensus 113 -----~~~~~~~~~~~~~~~~~~~~~~~~~l~--D~~----~~~~~~ygv~~~~---~g-~~~P~~~lID~~G~I~~~~~ 177 (222)
T 3ztl_A 113 -----SQYSHLAWDNLDRKSGGLGHMKIPLLA--DRK----QEISKAYGVFDEE---DG-NAFRGLFIIDPNGILRQITI 177 (222)
T ss_dssp -----CHHHHHHHHHSCGGGTSCCSCSSCEEE--CSS----SHHHHHTTCBCTT---TS-SBCEEEEEECTTSEEEEEEE
T ss_pred -----CHHHHHHHHHHhhhhccccccceeEEe--CCc----hHHHHHcCCeecC---CC-CccceEEEECCCCeEEEEEe
Confidence 678888998876 89999983 332 2344444322110 00 04689999999999999886
Q ss_pred CCCCcc
Q psy299 184 ANASPA 189 (240)
Q Consensus 184 ~~~~~~ 189 (240)
+....+
T Consensus 178 g~~~~~ 183 (222)
T 3ztl_A 178 NDKPVG 183 (222)
T ss_dssp ECTTBC
T ss_pred cCCCCC
Confidence 654443
No 71
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.91 E-value=2.2e-24 Score=176.99 Aligned_cols=148 Identities=11% Similarity=0.098 Sum_probs=113.7
Q ss_pred cccccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCC
Q psy299 34 MADDSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQ 112 (240)
Q Consensus 34 ~~~~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~ 112 (240)
.....+..|.++|+|+++|.+|+.++|++++||++||+|| ++||++|..++|.|++++++| +++.||+||.|
T Consensus 47 ~~~~~l~~G~~aPdf~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D----- 119 (200)
T 3zrd_A 47 VAGKLPQIGDKAKDFTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSD----- 119 (200)
T ss_dssp EESCCCCTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESS-----
T ss_pred eecccCCCCCCCCCeEEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECC-----
Confidence 3445678999999999999999999999999999999999 689999999999999999999 58999999987
Q ss_pred CCCCHHHHHHHHHhcCc-ceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCC--CCcc
Q psy299 113 EPGDADQICEFTKKKNV-QFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAAN--ASPA 189 (240)
Q Consensus 113 ~~~~~e~~~~~~~~~~~-~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~--~~~~ 189 (240)
+++.+++|++++++ +||++ .|.. ...+...++.........++ ..|++||||++|+|++++.+. ....
T Consensus 120 ---~~~~~~~~~~~~~~~~f~~l--~D~~---~~~~~~~ygv~~~~~~~~g~-~~p~~~lID~~G~I~~~~~~~~~~~~~ 190 (200)
T 3zrd_A 120 ---LPFAQSRFCGAEGLSNVITL--STLR---GADFKQAYGVAITEGPLAGL-TARAVVVLDGQDNVIYSELVNEITTEP 190 (200)
T ss_dssp ---CHHHHTTCTTTTTCTTEEEE--ETTS---CTHHHHHTTCEECSSTTTTS-BCCEEEEECTTSBEEEEEECSBTTSCC
T ss_pred ---CHHHHHHHHHHcCCCCceEE--ecCc---hHHHHHHhCceeecccCCCc-cccEEEEECCCCeEEEEEecCCcccCC
Confidence 78999999999999 99998 3331 12344444332110000011 358999999999999987543 2233
Q ss_pred chHHHHHH
Q psy299 190 SLIPHIEI 197 (240)
Q Consensus 190 ~l~~~L~~ 197 (240)
++.+.|+.
T Consensus 191 ~~~~~l~~ 198 (200)
T 3zrd_A 191 NYDAALAA 198 (200)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHh
Confidence 35555544
No 72
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.91 E-value=3.8e-24 Score=177.98 Aligned_cols=156 Identities=13% Similarity=0.131 Sum_probs=116.3
Q ss_pred cccccccCCcccCCeEeec---CCCCcccCCCCCCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCC
Q psy299 34 MADDSWKNAETVYDFTVKN---IKGEDVPLSTYKGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQF 109 (240)
Q Consensus 34 ~~~~~~~~g~~~p~f~l~d---~~G~~v~ls~~~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~ 109 (240)
.....+.+|.++|+|++++ .+|+.++|++++||++||+|| ++|||+|+.+++.|++++++|+++++.||+||+|
T Consensus 22 ~~~~~l~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D-- 99 (220)
T 1zye_A 22 LEDPAPAVTQHAPYFKGTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVD-- 99 (220)
T ss_dssp -----CCTTSBCCCCEEEEECSSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESS--
T ss_pred ccCCcccCCCCCCCcEEEeeeCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC--
Confidence 3444678999999999984 578999999999999999999 9999999999999999999999989999999987
Q ss_pred CCCCCCCHHHHHHHHHhc-------CcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEec
Q psy299 110 GGQEPGDADQICEFTKKK-------NVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERH 182 (240)
Q Consensus 110 ~~~~~~~~e~~~~~~~~~-------~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~ 182 (240)
+.+..++|++++ +++||++ .|.. ..+.+.++...... + ..+|++||||++|+|++++
T Consensus 100 ------~~~~~~~~~~~~~~~~g~~~~~fp~l--~D~~----~~i~~~ygv~~~~~-g---~~~P~~~liD~~G~I~~~~ 163 (220)
T 1zye_A 100 ------SHFSHLAWINTPRKNGGLGHMNIALL--SDLT----KQISRDYGVLLEGP-G---LALRGLFIIDPNGVIKHLS 163 (220)
T ss_dssp ------CHHHHHHHHTSCGGGTCCCSCSSEEE--ECTT----SHHHHHTTCEETTT-T---EECEEEEEECTTSBEEEEE
T ss_pred ------CHHHHHHHHHHHHHhCCCcCCceEEE--ECCc----HHHHHHhCCeecCC-C---cccceEEEECCCCEEEEEE
Confidence 678899999887 8899998 3322 23444443211100 0 1568999999999999987
Q ss_pred cCCC----CccchHHHHHHhcccC------CCCcc
Q psy299 183 AANA----SPASLIPHIEILGRTS------AIKWN 207 (240)
Q Consensus 183 ~~~~----~~~~l~~~L~~ll~~~------~i~~~ 207 (240)
.+.. +.+++.+.|++++... .++|.
T Consensus 164 ~g~~~~~~~~~ell~~l~~l~~~~~~~~~cp~~W~ 198 (220)
T 1zye_A 164 VNDLPVGRSVEETLRLVKAFQFVEAHGEVSPANWT 198 (220)
T ss_dssp EECTTCCCCHHHHHHHHHHHHHTTC----------
T ss_pred ecCCCCCCCHHHHHHHHHHhhhhcccCCccCCCCC
Confidence 5543 3466888888877432 56785
No 73
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.91 E-value=3.1e-24 Score=175.04 Aligned_cols=152 Identities=16% Similarity=0.214 Sum_probs=120.0
Q ss_pred cccCCcccCCeEeecC-CC--CcccCCCCCCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCC
Q psy299 38 SWKNAETVYDFTVKNI-KG--EDVPLSTYKGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQE 113 (240)
Q Consensus 38 ~~~~g~~~p~f~l~d~-~G--~~v~ls~~~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~ 113 (240)
.+..|.++|+|++++. +| +.++|++++||++||+|| ++||++|+.++|.|++++++|+++++.||+|++|
T Consensus 4 ~l~~G~~aP~f~l~~~~~g~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d------ 77 (197)
T 1qmv_A 4 NARIGKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVD------ 77 (197)
T ss_dssp TBCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS------
T ss_pred cccCCCCCCCeEeEeecCCCccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC------
Confidence 4678999999999998 88 999999999999999999 9999999999999999999999889999999987
Q ss_pred CCCHHHHHHHHHhc-------CcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCC
Q psy299 114 PGDADQICEFTKKK-------NVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANA 186 (240)
Q Consensus 114 ~~~~e~~~~~~~~~-------~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~ 186 (240)
+.+..+++++++ +++||++ .|.. ..+...++...... + ...|++||||++|+|+.++.+..
T Consensus 78 --~~~~~~~~~~~~~~~~~~~~~~~p~l--~D~~----~~~~~~~gv~~~~~---~-~~~P~~~lid~~G~i~~~~~g~~ 145 (197)
T 1qmv_A 78 --SQFTHLAWINTPRKEGGLGPLNIPLL--ADVT----RRLSEDYGVLKTDE---G-IAYRGLFIIDGKGVLRQITVNDL 145 (197)
T ss_dssp --CHHHHHHHHTSCGGGTCCCSCSSCEE--ECTT----CHHHHHTTCEETTT---T-EECEEEEEECTTSBEEEEEEECT
T ss_pred --CHHHHHHHHHHHHhhCCCCCCceEEE--ECCc----HHHHHHcCCccCCC---C-ceeeEEEEECCCCcEEEEEeCCC
Confidence 678888999887 8899988 3332 23444443211100 0 14689999999999999876543
Q ss_pred ----CccchHHHHHHhc------ccCCCCcc
Q psy299 187 ----SPASLIPHIEILG------RTSAIKWN 207 (240)
Q Consensus 187 ----~~~~l~~~L~~ll------~~~~i~~~ 207 (240)
+.+++.+.|+++. ..-.++|.
T Consensus 146 ~~~~~~~e~l~~l~~l~~~~~~~~~cp~~w~ 176 (197)
T 1qmv_A 146 PVGRSVDEALRLVQAFQYTDEHGEVCPAGWK 176 (197)
T ss_dssp TBCCCHHHHHHHHHHHHHHHHHCCBBCTTCC
T ss_pred CCCCCHHHHHHHHHhcchhhccCCccCCCcC
Confidence 3456777777765 22367886
No 74
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.91 E-value=5.2e-25 Score=174.46 Aligned_cols=146 Identities=15% Similarity=0.161 Sum_probs=115.3
Q ss_pred ccccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCC-CCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCC
Q psy299 35 ADDSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASR-CGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQE 113 (240)
Q Consensus 35 ~~~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atw-Cp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~ 113 (240)
....+.+|.++|+|+++|.+|+.+++++++||++||+||++| |++|+.++|.|++++++| .++.+++|+.|
T Consensus 14 ~~~~~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d------ 85 (167)
T 2jsy_A 14 VGQEVKVGDQAPDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISAD------ 85 (167)
T ss_dssp SSCCCCTTSCCCCCEEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECS------
T ss_pred ccCccCCCCcCCceEEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECC------
Confidence 334578999999999999999999999999999999999999 999999999999999999 57999999987
Q ss_pred CCCHHHHHHHHHhcCc-ceeeeEeee-cCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCC-----
Q psy299 114 PGDADQICEFTKKKNV-QFDLFEKIN-VNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANA----- 186 (240)
Q Consensus 114 ~~~~e~~~~~~~~~~~-~fp~~~~~d-~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~----- 186 (240)
+++.+++|++++++ +||++ .| .. ..+.+.++..... .++ ..|++||||++|+|++++.+..
T Consensus 86 --~~~~~~~~~~~~~~~~~~~~--~d~~~----~~~~~~~~v~~~~---~g~-~~p~~~lid~~G~i~~~~~g~~~~~~~ 153 (167)
T 2jsy_A 86 --LPFAQARWCGANGIDKVETL--SDHRD----MSFGEAFGVYIKE---LRL-LARSVFVLDENGKVVYAEYVSEATNHP 153 (167)
T ss_dssp --SGGGTSCCGGGSSCTTEEEE--EGGGT----CHHHHHTTCBBTT---TCS-BCCEEEEECTTSCEEEEEECSBTTSCC
T ss_pred --CHHHHHHHHHhcCCCCceEe--eCCch----hHHHHHhCCcccc---CCc-eeeEEEEEcCCCcEEEEEecCCcCCCC
Confidence 56778899999999 89998 34 22 2333443221110 001 1489999999999999885421
Q ss_pred CccchHHHHHHhcc
Q psy299 187 SPASLIPHIEILGR 200 (240)
Q Consensus 187 ~~~~l~~~L~~ll~ 200 (240)
+.+++.+.|+++++
T Consensus 154 ~~~~l~~~l~~llk 167 (167)
T 2jsy_A 154 NYEKPIEAAKALVK 167 (167)
T ss_dssp CSHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhhC
Confidence 33568888888764
No 75
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.91 E-value=1.3e-24 Score=171.04 Aligned_cols=144 Identities=10% Similarity=0.163 Sum_probs=112.8
Q ss_pred ccccCCcccCCeEeecCCCCcccCCCCCCc--EEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCC
Q psy299 37 DSWKNAETVYDFTVKNIKGEDVPLSTYKGH--VLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQE 113 (240)
Q Consensus 37 ~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk--~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~ 113 (240)
..+..|+.+|+|+++|.+|+.+++++++|| ++||+|| ++|||+|+.++|.|++++++|++++ .||+||.|
T Consensus 5 ~~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d------ 77 (159)
T 2a4v_A 5 NELEIGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSAD------ 77 (159)
T ss_dssp TCCCTTCBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESC------
T ss_pred CcCCCCCCCCCeEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCC------
Confidence 356799999999999999999999999987 8999987 9999999999999999999999989 99999987
Q ss_pred CCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCc---cc
Q psy299 114 PGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASP---AS 190 (240)
Q Consensus 114 ~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~---~~ 190 (240)
+++.+++|+++++++||++ .|.. ..+.+.++....... + ..|++||| ++|+|++++.+..+. +.
T Consensus 78 --~~~~~~~~~~~~~~~~~~l--~D~~----~~~~~~~gv~~~p~~--g--~~~~~~li-~~G~i~~~~~g~~~~~~~~~ 144 (159)
T 2a4v_A 78 --SVTSQKKFQSKQNLPYHLL--SDPK----REFIGLLGAKKTPLS--G--SIRSHFIF-VDGKLKFKRVKISPEVSVND 144 (159)
T ss_dssp --CHHHHHHHHHHHTCSSEEE--ECTT----CHHHHHHTCBSSSSS--C--BCCEEEEE-ETTEEEEEEESCCHHHHHHH
T ss_pred --CHHHHHHHHHHhCCCceEE--ECCc----cHHHHHhCCcccccC--C--ccceEEEE-cCCEEEEEEccCCccccHHH
Confidence 7899999999999999999 3432 234444433221100 1 13589999 999999998765433 33
Q ss_pred hHHHHHHhcc
Q psy299 191 LIPHIEILGR 200 (240)
Q Consensus 191 l~~~L~~ll~ 200 (240)
+.+.|.++++
T Consensus 145 ~~~~l~~~l~ 154 (159)
T 2a4v_A 145 AKKEVLEVAE 154 (159)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4455555543
No 76
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.91 E-value=4.6e-24 Score=167.51 Aligned_cols=139 Identities=17% Similarity=0.305 Sum_probs=114.6
Q ss_pred ccccccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCC
Q psy299 33 SMADDSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQ 112 (240)
Q Consensus 33 ~~~~~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~ 112 (240)
......+.+|..+|+|++++.+|+.+++++++||++||.||++||++|+.++|.|+++++++++.++.+++|++|.
T Consensus 9 ~~~~~~~~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~---- 84 (158)
T 3hdc_A 9 ESDAPLVRTGALAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK---- 84 (158)
T ss_dssp CCCSCCCCTTSBCCCCEEECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS----
T ss_pred ccCCcccCCCCcCCCceeEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH----
Confidence 3445567899999999999999999999999999999999999999999999999999999998889999999872
Q ss_pred CCCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccc--
Q psy299 113 EPGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPAS-- 190 (240)
Q Consensus 113 ~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~-- 190 (240)
.+++++++++++||++. |.. ..+...+ ++..+|++||||++|+|+.++.+..+.+.
T Consensus 85 ------~~~~~~~~~~~~~~~~~--d~~----~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~ 142 (158)
T 3hdc_A 85 ------RFPEKYRRAPVSFNFLS--DAT----GQVQQRY----------GANRLPDTFIVDRKGIIRQRVTGGIEWDAPK 142 (158)
T ss_dssp ------SCCGGGGGCCCSCEEEE--CTT----SHHHHHT----------TCCSSSEEEEECTTSBEEEEEESCCCTTSHH
T ss_pred ------HHHHHHHHcCCCceEEE--Cch----HHHHHHh----------CCCCcceEEEEcCCCCEEEEEeCCCccchHH
Confidence 46778889999999983 322 2344433 56678999999999999999987665432
Q ss_pred hHHHHHH
Q psy299 191 LIPHIEI 197 (240)
Q Consensus 191 l~~~L~~ 197 (240)
+.+.+.+
T Consensus 143 ~~~~~~~ 149 (158)
T 3hdc_A 143 VVSYLKS 149 (158)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 5555544
No 77
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.90 E-value=9.6e-24 Score=178.01 Aligned_cols=156 Identities=12% Similarity=0.112 Sum_probs=117.3
Q ss_pred cccccccCCcccCCeEeecC---CCCcccCCCCCCcEEEEEEec-CCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCC
Q psy299 34 MADDSWKNAETVYDFTVKNI---KGEDVPLSTYKGHVLVIVNVA-SRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQF 109 (240)
Q Consensus 34 ~~~~~~~~g~~~p~f~l~d~---~G~~v~ls~~~gk~vlv~F~a-twCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~ 109 (240)
.....+.+|+++|+|++++. +|+.++|++++||++||+||+ +|||+|+.++|.|++++++|+++|+.||+||+|
T Consensus 43 ~~~~~l~vG~~aPdF~l~~~~d~~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D-- 120 (240)
T 3qpm_A 43 LHLSKAKISKPAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVD-- 120 (240)
T ss_dssp CEECSCCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESS--
T ss_pred cccCcCCCCCCCCCcEeeeeeCCCCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC--
Confidence 33456789999999998754 467999999999999999998 999999999999999999999999999999987
Q ss_pred CCCCCCCHHHHHHHHHhc-------CcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEec
Q psy299 110 GGQEPGDADQICEFTKKK-------NVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERH 182 (240)
Q Consensus 110 ~~~~~~~~e~~~~~~~~~-------~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~ 182 (240)
+.+..++|++++ +++||++ .|..+ .+...++...... + ...|++||||++|+|++++
T Consensus 121 ------~~~~~~~~~~~~~~~~~~~~~~fp~l--~D~~~----~v~~~ygv~~~~~---g-~~~p~~flID~~G~I~~~~ 184 (240)
T 3qpm_A 121 ------SQFTHLAWIITPRKQGGLGPMKIPLL--SDLTH----QISKDYGVYLEDQ---G-HTLRGLFIIDEKGVLRQIT 184 (240)
T ss_dssp ------CHHHHHHHHHSCGGGTCCCSCSSCEE--ECTTS----HHHHHTTCEETTT---T-EECEEEEEECTTSBEEEEE
T ss_pred ------CHHHHHHHHHHHHhhcCCCCCceeEE--eCchH----HHHHHhCCccccC---C-CccceEEEEcCCCeEEEEE
Confidence 788899999886 8999998 34332 3444443321100 0 1358999999999999987
Q ss_pred cCCCC----ccchHHHHHHhcc------cCCCCcc
Q psy299 183 AANAS----PASLIPHIEILGR------TSAIKWN 207 (240)
Q Consensus 183 ~~~~~----~~~l~~~L~~ll~------~~~i~~~ 207 (240)
.+... .+++.+.|+.+-. .-+++|.
T Consensus 185 ~~~~~~~~~~~eil~~l~~lq~~~~~~~~cp~~W~ 219 (240)
T 3qpm_A 185 MNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWK 219 (240)
T ss_dssp EECTTBCCCHHHHHHHHHHHHHHHHHSCBBCTTCC
T ss_pred ecCCCCCCCHHHHHHHHHHhhhhhhcCCccCCCCC
Confidence 54333 2345555554431 1267884
No 78
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.84 E-value=7.6e-26 Score=177.61 Aligned_cols=142 Identities=17% Similarity=0.253 Sum_probs=115.7
Q ss_pred cccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHH-HHHHHh-hcCcEEEEeecCCCCCCCCC
Q psy299 38 SWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVE-LDEKFR-DRGLRILAFPCNQFGGQEPG 115 (240)
Q Consensus 38 ~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~-l~~~~~-~~~v~vi~Vs~D~~~~~~~~ 115 (240)
.+.+|.++|+|+++|.+|+.+++++++||++||+||++|||+|+.++|.|++ ++++++ +.++.+++|++| +
T Consensus 6 ~l~~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d-------~ 78 (159)
T 2ls5_A 6 IVRIGEMAPDFTITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRD-------E 78 (159)
Confidence 5679999999999999999999999999999999999999999999999998 999998 668999999987 3
Q ss_pred CHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHH
Q psy299 116 DADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHI 195 (240)
Q Consensus 116 ~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L 195 (240)
+.+.+++|.++++++||++ .|..+.. .+.++. .+..+|++||||++|+|+.++.+ .+++++.+.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~--~d~~~~~----~~~~~~--------~~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l 143 (159)
T 2ls5_A 79 PLEKVLAFAKSTGVTYPLG--LDPGADI----FAKYAL--------RDAGITRNVLIDREGKIVKLTRL-YNEEEFASLV 143 (159)
Confidence 5678899999999999998 3433322 222211 13346899999999999998866 4555677777
Q ss_pred HHhccc
Q psy299 196 EILGRT 201 (240)
Q Consensus 196 ~~ll~~ 201 (240)
+++.+.
T Consensus 144 ~~l~~~ 149 (159)
T 2ls5_A 144 QQINEM 149 (159)
Confidence 666544
No 79
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.90 E-value=4.7e-24 Score=168.78 Aligned_cols=141 Identities=18% Similarity=0.226 Sum_probs=116.6
Q ss_pred ccccccCCcccCCeEeecC--CCCcccCCCC-CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCC
Q psy299 35 ADDSWKNAETVYDFTVKNI--KGEDVPLSTY-KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGG 111 (240)
Q Consensus 35 ~~~~~~~g~~~p~f~l~d~--~G~~v~ls~~-~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~ 111 (240)
....+.+|.++|+|+++|. +|+.++++++ +||++||+||++|||+|+.++|.|++++++ ++.+++|++|
T Consensus 18 ~~~~~~~G~~~P~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~---- 89 (168)
T 2b1k_A 18 NLESALIGKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYK---- 89 (168)
T ss_dssp -CCCTTTTSBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEES----
T ss_pred cccccccCCcCCCeEeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECC----
Confidence 3445679999999999999 9999999884 999999999999999999999999998875 6999999987
Q ss_pred CCCCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccch
Q psy299 112 QEPGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASL 191 (240)
Q Consensus 112 ~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l 191 (240)
++.+.+++|+++++++||.+. .|.. ..+...+ ++..+|++|+||++|+|+.++.+..+.+.+
T Consensus 90 ---~~~~~~~~~~~~~~~~~~~~~-~d~~----~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l 151 (168)
T 2b1k_A 90 ---DDRQKAISWLKELGNPYALSL-FDGD----GMLGLDL----------GVYGAPETFLIDGNGIIRYRHAGDLNPRVW 151 (168)
T ss_dssp ---CCHHHHHHHHHHHCCCCSEEE-EETT----CHHHHHH----------TCCSSSEEEEECTTSBEEEEEESCCCHHHH
T ss_pred ---CChHHHHHHHHHcCCCCceee-ECcc----hHHHHHc----------CccccCEEEEECCCCeEEEEEeCCCCHHHH
Confidence 578999999999999998431 2322 2233333 566779999999999999999888888888
Q ss_pred HHHHHHhccc
Q psy299 192 IPHIEILGRT 201 (240)
Q Consensus 192 ~~~L~~ll~~ 201 (240)
.+.|+++++.
T Consensus 152 ~~~l~~~l~~ 161 (168)
T 2b1k_A 152 EEEIKPLWEK 161 (168)
T ss_dssp HHTTHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888777653
No 80
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.90 E-value=1.9e-23 Score=158.04 Aligned_cols=136 Identities=18% Similarity=0.282 Sum_probs=114.2
Q ss_pred ccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHH
Q psy299 44 TVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEF 123 (240)
Q Consensus 44 ~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~ 123 (240)
++|+|+++|.+|+.+++++++||++||.||++||++|+.+++.|+++++++++ ++.+++|..+.. ...++.+.++++
T Consensus 1 ~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~v~i~~~~~--~~~~~~~~~~~~ 77 (138)
T 4evm_A 1 EVADFELMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGD-DYVVLTVVSPGH--KGEQSEADFKNW 77 (138)
T ss_dssp CCCCCEEEBTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT-TEEEEEEECTTS--TTCCCHHHHHHH
T ss_pred CCCcceeECCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC-CcEEEEEEcCCC--CchhhHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999654 699999965422 234789999999
Q ss_pred HHhcCc-ceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHh
Q psy299 124 TKKKNV-QFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEIL 198 (240)
Q Consensus 124 ~~~~~~-~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~l 198 (240)
++++++ +||++ .|..+ .+.+.+ ++..+|+++|||++|+|+.++.+..+.+++.+.|+++
T Consensus 78 ~~~~~~~~~~~~--~d~~~----~~~~~~----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 78 YKGLDYKNLPVL--VDPSG----KLLETY----------GVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp HTTCCCTTCCEE--ECTTC----HHHHHT----------TCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred HhhcCCCCeeEE--ECcch----HHHHHc----------CcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 999999 89988 33222 344433 5667799999999999999998888888888888765
No 81
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.90 E-value=3.9e-24 Score=168.08 Aligned_cols=142 Identities=11% Similarity=0.060 Sum_probs=119.0
Q ss_pred cCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHH
Q psy299 40 KNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQ 119 (240)
Q Consensus 40 ~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~ 119 (240)
..|..+| +++|.+|+.+++++++||++||+||++||++|+.++|.|++++++|+..++.||+|++|.. ...++.+.
T Consensus 15 ~~~~~~p--~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~--~~~~~~~~ 90 (164)
T 2h30_A 15 TVPHTMS--TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGF--LHEKKDGE 90 (164)
T ss_dssp CHHHHHT--TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTS--TTCCCTTH
T ss_pred ccCCcCC--ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCC--ccccCHHH
Confidence 4555666 7889999999999999999999999999999999999999999999988999999998743 33457789
Q ss_pred HHHHHHhcCcc-eeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHh
Q psy299 120 ICEFTKKKNVQ-FDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEIL 198 (240)
Q Consensus 120 ~~~~~~~~~~~-fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~l 198 (240)
++++.++++++ +++. .|.. ..+.+.+ ++..+|++||||++|+++.++.+..+.++|.+.|+++
T Consensus 91 ~~~~~~~~~~~~~~~~--~d~~----~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~ 154 (164)
T 2h30_A 91 FQKWYAGLNYPKLPVV--TDNG----GTIAQNL----------NISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNP 154 (164)
T ss_dssp HHHHHTTSCCTTSCEE--ECTT----CHHHHHT----------TCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCT
T ss_pred HHHHHHhCCCCcceEE--EcCc----hHHHHHc----------CCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 99999988888 7776 3322 2344433 5677899999999999999998888888899999998
Q ss_pred ccc
Q psy299 199 GRT 201 (240)
Q Consensus 199 l~~ 201 (240)
++.
T Consensus 155 ~~~ 157 (164)
T 2h30_A 155 NAD 157 (164)
T ss_dssp TCC
T ss_pred HHH
Confidence 864
No 82
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.90 E-value=8.5e-24 Score=167.48 Aligned_cols=132 Identities=12% Similarity=0.130 Sum_probs=107.0
Q ss_pred ccCCcccCCeEee--cCCC--CcccCCC-CCCcEEEEEEe-cCCCCCcH-HHHHHHHHHHHHHhhcCcE-EEEeecCCCC
Q psy299 39 WKNAETVYDFTVK--NIKG--EDVPLST-YKGHVLVIVNV-ASRCGYTG-KHYKELVELDEKFRDRGLR-ILAFPCNQFG 110 (240)
Q Consensus 39 ~~~g~~~p~f~l~--d~~G--~~v~ls~-~~gk~vlv~F~-atwCp~C~-~~~~~L~~l~~~~~~~~v~-vi~Vs~D~~~ 110 (240)
+..|+++|+|+++ |.+| +.++|++ ++||++||+|| ++|||+|+ .++|.|++++++|+++|+. |++||.|
T Consensus 4 ~~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d--- 80 (162)
T 1tp9_A 4 IAVGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVN--- 80 (162)
T ss_dssp CCTTCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESS---
T ss_pred CCCCCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC---
Confidence 5789999999986 8999 9999999 99999999999 89999999 9999999999999999999 9999987
Q ss_pred CCCCCCHHHHHHHHHhcCc--ceeeeEeeecCCCCCchHHHHHhhhcCC-cccccccccceEEEEcCCCCeEEeccCC
Q psy299 111 GQEPGDADQICEFTKKKNV--QFDLFEKINVNGDNAHPLWKFLKHKQGG-TLVDAIKWNFTKFIVDKNGVPVERHAAN 185 (240)
Q Consensus 111 ~~~~~~~e~~~~~~~~~~~--~fp~~~~~d~~~~~~~~l~~~~~~~~~~-~~~~~v~~~P~~~lID~~G~Iv~~~~~~ 185 (240)
+++.+++|++++++ +||++ .|.. ..+.+.++..... ..+.++...|++|||| +|+|++.+.+.
T Consensus 81 -----~~~~~~~~~~~~~~~~~~~~l--~D~~----~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~~~~~ 146 (162)
T 1tp9_A 81 -----DPFVMKAWAKSYPENKHVKFL--ADGS----ATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAANIEG 146 (162)
T ss_dssp -----CHHHHHHHHHTCTTCSSEEEE--ECTT----SHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEEEECS
T ss_pred -----CHHHHHHHHHhcCCCCCeEEE--ECCC----chHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEEEeeC
Confidence 78999999999999 89998 3433 2344544432110 0000122368999999 99999988654
No 83
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.90 E-value=5e-24 Score=165.97 Aligned_cols=140 Identities=16% Similarity=0.147 Sum_probs=113.8
Q ss_pred cccccCCcccCCeEeecCCC--------CcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 36 DDSWKNAETVYDFTVKNIKG--------EDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 36 ~~~~~~g~~~p~f~l~d~~G--------~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
.....+|..+|+|++++.+| +.+++++++||++||.||++||++|+.++|.|++++++ .++.+++|++|
T Consensus 5 ~~~~~~g~~~p~f~l~~~~g~~~~~~~~~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~~~ 81 (156)
T 1kng_A 5 IPSALIGRPAPQTALPPLEGLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD---KRFQLVGINYK 81 (156)
T ss_dssp -------CBCCCCCBCCCTTCEETTEECCCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC---TTSEEEEEEES
T ss_pred hhhHHhCCCCCCceeeeccCcccccccCceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc---CCeEEEEEECC
Confidence 34567999999999999999 99999999999999999999999999999999998876 35999999987
Q ss_pred CCCCCCCCCHHHHHHHHHhcCccee-eeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCC
Q psy299 108 QFGGQEPGDADQICEFTKKKNVQFD-LFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANA 186 (240)
Q Consensus 108 ~~~~~~~~~~e~~~~~~~~~~~~fp-~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~ 186 (240)
++.+.+++++++++++|| +. .|.. ..+...+ ++..+|++|+||++|+++.++.+..
T Consensus 82 -------~~~~~~~~~~~~~~~~~~~~~--~d~~----~~~~~~~----------~v~~~P~~~~id~~G~i~~~~~g~~ 138 (156)
T 1kng_A 82 -------DAADNARRFLGRYGNPFGRVG--VDAN----GRASIEW----------GVYGVPETFVVGREGTIVYKLVGPI 138 (156)
T ss_dssp -------CCHHHHHHHHHHHCCCCSEEE--EETT----SHHHHHT----------TCCSSCEEEEECTTSBEEEEEESCC
T ss_pred -------CCHHHHHHHHHHcCCCCceee--eCch----hHHHHhc----------CcCccCeEEEEcCCCCEEEEEeCCC
Confidence 578999999999999998 44 3322 2333333 5667899999999999999998888
Q ss_pred CccchHHHHHHhccc
Q psy299 187 SPASLIPHIEILGRT 201 (240)
Q Consensus 187 ~~~~l~~~L~~ll~~ 201 (240)
+.+.+.+.|+++++.
T Consensus 139 ~~~~l~~~l~~~l~~ 153 (156)
T 1kng_A 139 TPDNLRSVLLPQMEK 153 (156)
T ss_dssp CHHHHHHTHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 888888888887753
No 84
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.90 E-value=1.3e-23 Score=168.92 Aligned_cols=147 Identities=16% Similarity=0.191 Sum_probs=111.1
Q ss_pred cccccCCcccCCeEee-cCCCCcccCCC-CCCcEEEE-EEecCCCCCcH-HHHHHHHHHHHHHhhcCcEEEE-eecCCCC
Q psy299 36 DDSWKNAETVYDFTVK-NIKGEDVPLST-YKGHVLVI-VNVASRCGYTG-KHYKELVELDEKFRDRGLRILA-FPCNQFG 110 (240)
Q Consensus 36 ~~~~~~g~~~p~f~l~-d~~G~~v~ls~-~~gk~vlv-~F~atwCp~C~-~~~~~L~~l~~~~~~~~v~vi~-Vs~D~~~ 110 (240)
.....+|+++|+|+++ +.+|+.++|++ ++||++|| +||++|||+|. .++|.|++++++|+++|+.+|+ ||.|
T Consensus 12 ~~~~~vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D--- 88 (173)
T 3mng_A 12 SAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVN--- 88 (173)
T ss_dssp -CCCCTTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS---
T ss_pred CCCCCCCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCC---
Confidence 3456899999999999 99999999999 69996555 55699999999 5999999999999999999997 9987
Q ss_pred CCCCCCHHHHHHHHHhcCcc--eeeeEeeecCCCCCchHHHHHhhhcCCc---ccccccccceEEEEcCCCCeEEeccCC
Q psy299 111 GQEPGDADQICEFTKKKNVQ--FDLFEKINVNGDNAHPLWKFLKHKQGGT---LVDAIKWNFTKFIVDKNGVPVERHAAN 185 (240)
Q Consensus 111 ~~~~~~~e~~~~~~~~~~~~--fp~~~~~d~~~~~~~~l~~~~~~~~~~~---~~~~v~~~P~~~lID~~G~Iv~~~~~~ 185 (240)
+++..++|+++++++ ||++ .|..+ .+.+.++...... ..+.....|++|||| +|+|++.+.+.
T Consensus 89 -----~~~~~~~f~~~~~~~~~fp~l--~D~~~----~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~v~~ 156 (173)
T 3mng_A 89 -----DAFVTGEWGRAHKAEGKVRLL--ADPTG----AFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALNVEP 156 (173)
T ss_dssp -----CHHHHHHHHHHTTCTTTCEEE--ECTTC----HHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEEECT
T ss_pred -----CHHHHHHHHHHhCCCCceEEE--ECCCh----HHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEEEeC
Confidence 789999999999998 9999 44433 3444444322100 001123458999999 99999988553
Q ss_pred C----CccchHHHHHH
Q psy299 186 A----SPASLIPHIEI 197 (240)
Q Consensus 186 ~----~~~~l~~~L~~ 197 (240)
. +..+..+.|++
T Consensus 157 ~~~g~~~~~~~~vl~~ 172 (173)
T 3mng_A 157 DGTGLTCSLAPNIISQ 172 (173)
T ss_dssp TSSCSSTTSHHHHHHH
T ss_pred CCCCcchHHHHHHHHh
Confidence 3 23345555543
No 85
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.89 E-value=3.2e-23 Score=176.20 Aligned_cols=160 Identities=11% Similarity=0.074 Sum_probs=112.9
Q ss_pred ccccccCCcccCCeEee---cCCCCcccCCCCCCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCC
Q psy299 35 ADDSWKNAETVYDFTVK---NIKGEDVPLSTYKGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFG 110 (240)
Q Consensus 35 ~~~~~~~g~~~p~f~l~---d~~G~~v~ls~~~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~ 110 (240)
....+.+|+++|+|+++ |.+|+.++|++++||++||+|| ++||++|+.++|.|++++++|+++|+.||+||+|
T Consensus 58 ~~~~l~vG~~aPdF~l~~l~d~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D--- 134 (254)
T 3tjj_A 58 HLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD--- 134 (254)
T ss_dssp -CCCCCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESS---
T ss_pred cccccCCCCCCCCcEeeeecCCCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCC---
Confidence 34567799999999977 4467899999999999999999 9999999999999999999999999999999987
Q ss_pred CCCCCCHHHHHHHHHhc-------CcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEecc
Q psy299 111 GQEPGDADQICEFTKKK-------NVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHA 183 (240)
Q Consensus 111 ~~~~~~~e~~~~~~~~~-------~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~ 183 (240)
+.+..++|++++ +++||++ .|..+ .+...++...... + ...|++||||++|+|++++.
T Consensus 135 -----~~~~~~~~~~~~~~~~g~~~~~fp~l--~D~~~----~va~~ygv~~~~~---g-~~~p~tflID~~G~I~~~~~ 199 (254)
T 3tjj_A 135 -----SQFTHLAWINTPRRQGGLGPIRIPLL--SDLTH----QISKDYGVYLEDS---G-HTLRGLFIIDDKGILRQITL 199 (254)
T ss_dssp -----CHHHHHHHHTSCGGGTSCCSCSSCEE--ECTTS----HHHHHHTCEETTT---T-EECEEEEEECTTSBEEEEEE
T ss_pred -----CHHHHHHHHHHHHHhcCCccccccee--eCcHH----HHHHHcCCccccC---C-CccceEEEECCCCeEEEEEe
Confidence 788899999876 8899999 44332 3444443321100 0 13589999999999999875
Q ss_pred CCCC----ccchHHHHHHhcc------cCCCCcceeEEE
Q psy299 184 ANAS----PASLIPHIEILGR------TSAIKWNFTKFI 212 (240)
Q Consensus 184 ~~~~----~~~l~~~L~~ll~------~~~i~~~~~~~~ 212 (240)
+... .+++.+.|+.+-. .-.++|.=.+-+
T Consensus 200 ~~~~~~~~~~eil~~L~alq~~~~~~~~cp~~W~~g~~~ 238 (254)
T 3tjj_A 200 NDLPVGRSVDETLRLVQAFQYTDKHGEVAPAGWKPGSET 238 (254)
T ss_dssp ECTTCCCCHHHHHHHHHHHHHHHHHC-------------
T ss_pred cCCCCCCCHHHHHHHHHhhccccccCccccCCCCCCCce
Confidence 4332 2345555544331 126788544333
No 86
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.89 E-value=3.5e-23 Score=165.20 Aligned_cols=131 Identities=15% Similarity=0.230 Sum_probs=104.8
Q ss_pred ccCCcccCCeEee-cCCCCcccCCCC-CCcEEEEEEe-cCCCCCcHH-HHHHHHHHHHHHhhcCc-EEEEeecCCCCCCC
Q psy299 39 WKNAETVYDFTVK-NIKGEDVPLSTY-KGHVLVIVNV-ASRCGYTGK-HYKELVELDEKFRDRGL-RILAFPCNQFGGQE 113 (240)
Q Consensus 39 ~~~g~~~p~f~l~-d~~G~~v~ls~~-~gk~vlv~F~-atwCp~C~~-~~~~L~~l~~~~~~~~v-~vi~Vs~D~~~~~~ 113 (240)
+.+|+++|+|+++ |.+|+.++|+++ +||++||+|| ++|||+|+. ++|.|++++++|+++|+ .||+||.|
T Consensus 3 l~~G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d------ 76 (167)
T 2wfc_A 3 IKEGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVN------ 76 (167)
T ss_dssp CCTTCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESS------
T ss_pred CCCCCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCC------
Confidence 5689999999999 999999999998 9999988886 999999999 99999999999999999 99999987
Q ss_pred CCCHHHHHHHHHhcCcc--eeeeEeeecCCCCCchHHHHHhhhcCCc-ccccccccceEEEEcCCCCeEEeccC
Q psy299 114 PGDADQICEFTKKKNVQ--FDLFEKINVNGDNAHPLWKFLKHKQGGT-LVDAIKWNFTKFIVDKNGVPVERHAA 184 (240)
Q Consensus 114 ~~~~e~~~~~~~~~~~~--fp~~~~~d~~~~~~~~l~~~~~~~~~~~-~~~~v~~~P~~~lID~~G~Iv~~~~~ 184 (240)
+++.+++|+++++++ ||++ .|..+ .+.+.++...... ..+.....|++||| ++|+|++++.+
T Consensus 77 --~~~~~~~~~~~~~~~~~fp~l--~D~~~----~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~~~~ 141 (167)
T 2wfc_A 77 --DSFVMDAWGKAHGADDKVQML--ADPGG----AFTKAVDMELDLSAVLGNVRSKRYSLVI-EDGVVTKVNVE 141 (167)
T ss_dssp --CHHHHHHHHHHTTCTTTSEEE--ECTTS----HHHHHTTCEECCHHHHSSCEECCEEEEE-ETTEEEEEEEC
T ss_pred --CHHHHHHHHHhcCCCcceEEE--ECCCC----cHHHHcCCccccccccCcccceEEEEEE-eCCEEEEEEec
Confidence 788999999999999 9999 44332 2334443221100 00011234899999 99999998754
No 87
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.89 E-value=2.3e-23 Score=168.92 Aligned_cols=145 Identities=14% Similarity=0.171 Sum_probs=111.1
Q ss_pred cccCCcccCCeEeecC--CC-CcccCCC-CCCcE-EEEEEecCCCCCcHH-HHHHHHHHHHHHhhcCcE-EEEeecCCCC
Q psy299 38 SWKNAETVYDFTVKNI--KG-EDVPLST-YKGHV-LVIVNVASRCGYTGK-HYKELVELDEKFRDRGLR-ILAFPCNQFG 110 (240)
Q Consensus 38 ~~~~g~~~p~f~l~d~--~G-~~v~ls~-~~gk~-vlv~F~atwCp~C~~-~~~~L~~l~~~~~~~~v~-vi~Vs~D~~~ 110 (240)
.+.+|+++|+|++++. +| +.++|++ ++||+ +|++||++|||+|+. ++|.|++++++|+++|+. |++||.|
T Consensus 25 ~l~vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d--- 101 (184)
T 3uma_A 25 TIAVGDKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVN--- 101 (184)
T ss_dssp CCCTTCBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS---
T ss_pred cCCCCCCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECC---
Confidence 4689999999999998 99 9999999 89995 556667999999999 899999999999999999 9999987
Q ss_pred CCCCCCHHHHHHHHHhcCcc--eeeeEeeecCCCCCchHHHHHhhhcCCc-ccccccccceEEEEcCCCCeEEeccCCCC
Q psy299 111 GQEPGDADQICEFTKKKNVQ--FDLFEKINVNGDNAHPLWKFLKHKQGGT-LVDAIKWNFTKFIVDKNGVPVERHAANAS 187 (240)
Q Consensus 111 ~~~~~~~e~~~~~~~~~~~~--fp~~~~~d~~~~~~~~l~~~~~~~~~~~-~~~~v~~~P~~~lID~~G~Iv~~~~~~~~ 187 (240)
+++..++|+++++++ ||++ .|..+ .+.+.++...... .+.+++..|++|||| +|+|++.+.+..+
T Consensus 102 -----~~~~~~~f~~~~~~~~~fp~l--~D~~~----~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~~~~~~ 169 (184)
T 3uma_A 102 -----DLHVMGAWATHSGGMGKIHFL--SDWNA----AFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALNIEESP 169 (184)
T ss_dssp -----CHHHHHHHHHHHTCTTTSEEE--ECTTC----HHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEEECSST
T ss_pred -----CHHHHHHHHHHhCCCCceEEE--EcCch----HHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEEEEeCCC
Confidence 789999999999999 9999 44433 3444444322100 011233457899997 9999998865422
Q ss_pred ----ccchHHHHHH
Q psy299 188 ----PASLIPHIEI 197 (240)
Q Consensus 188 ----~~~l~~~L~~ 197 (240)
...+.+.|++
T Consensus 170 g~~~~~~~~~vL~~ 183 (184)
T 3uma_A 170 GQATASGAAAMLEL 183 (184)
T ss_dssp TCCSTTSHHHHHHH
T ss_pred CCCcCCCHHHHHhh
Confidence 2345555544
No 88
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.88 E-value=9.5e-23 Score=170.19 Aligned_cols=155 Identities=10% Similarity=0.149 Sum_probs=117.1
Q ss_pred cccCCcccCCeEeecCCCCcccCCCCCCc--EEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCC
Q psy299 38 SWKNAETVYDFTVKNIKGEDVPLSTYKGH--VLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPG 115 (240)
Q Consensus 38 ~~~~g~~~p~f~l~d~~G~~v~ls~~~gk--~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~ 115 (240)
.+..|+.+|+|++.+.+| .++|++++|| ++|++||++|||+|..+++.|++++++|+++|+.||+||+|
T Consensus 4 ~l~~G~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D-------- 74 (224)
T 1prx_A 4 GLLLGDVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSID-------- 74 (224)
T ss_dssp -CCTTCBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESS--------
T ss_pred cCCCcCCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCC--------
Confidence 357899999999999999 9999999998 56667799999999999999999999999999999999987
Q ss_pred CHHHHHHHHHh----------cCcceeeeEeeecCCCCCchHHHHHhhhcCCc-cccc-ccccceEEEEcCCCCeEEecc
Q psy299 116 DADQICEFTKK----------KNVQFDLFEKINVNGDNAHPLWKFLKHKQGGT-LVDA-IKWNFTKFIVDKNGVPVERHA 183 (240)
Q Consensus 116 ~~e~~~~~~~~----------~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~-~~~~-v~~~P~~~lID~~G~Iv~~~~ 183 (240)
+.+..++|++. ++++||++ .|..+ .+.+.++...... ...+ ....|++||||++|+|+..+.
T Consensus 75 ~~~~~~~~~~~i~~~~~~~~~~~~~fpil--~D~~~----~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~ 148 (224)
T 1prx_A 75 SVEDHLAWSKDINAYNSEEPTEKLPFPII--DDRNR----ELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSIL 148 (224)
T ss_dssp CHHHHHHHHHHHHHHTTSCCCSCCSSCEE--ECTTC----HHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEE
T ss_pred CHHHHHHHHHHHHHhhCcccccCcCccee--ecCch----HHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEe
Confidence 67777788876 88999998 34322 3444444321100 0001 123589999999999999875
Q ss_pred CC----CCccchHHHHHHhccc------CCCCcc
Q psy299 184 AN----ASPASLIPHIEILGRT------SAIKWN 207 (240)
Q Consensus 184 ~~----~~~~~l~~~L~~ll~~------~~i~~~ 207 (240)
+. .+.+++.+.|+.+... .++.|.
T Consensus 149 ~~~~~gr~~~eil~~i~~l~~~~~~~~~~p~~W~ 182 (224)
T 1prx_A 149 YPATTGRNFDEILRVVISLQLTAEKRVATPVDWK 182 (224)
T ss_dssp CCTTBCCCHHHHHHHHHHHHHHHHHCEEBCTTCC
T ss_pred cCCCCCCCHHHHHHHHHHHHhhccCCcCCCCCCC
Confidence 42 2456688888887743 255774
No 89
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.88 E-value=8.2e-23 Score=171.61 Aligned_cols=154 Identities=13% Similarity=0.211 Sum_probs=118.0
Q ss_pred ccCCcccCCeEeecCCCCcccCCCCCCc-EEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCC
Q psy299 39 WKNAETVYDFTVKNIKGEDVPLSTYKGH-VLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGD 116 (240)
Q Consensus 39 ~~~g~~~p~f~l~d~~G~~v~ls~~~gk-~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~ 116 (240)
+..|+++|+|++++.+| .++|++++|+ ++||+|| ++|||+|..+++.|++++++|+++|+.||+||+| +
T Consensus 3 l~iG~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D--------~ 73 (233)
T 2v2g_A 3 ITLGEVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCD--------N 73 (233)
T ss_dssp CCTTCBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESS--------C
T ss_pred CCCCCCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCC--------C
Confidence 56899999999999999 9999999998 9999998 9999999999999999999999999999999987 6
Q ss_pred HHHHHHHHH------hc--CcceeeeEeeecCCCCCchHHHHHhhhcCCc--ccccccccceEEEEcCCCCeEEeccCC-
Q psy299 117 ADQICEFTK------KK--NVQFDLFEKINVNGDNAHPLWKFLKHKQGGT--LVDAIKWNFTKFIVDKNGVPVERHAAN- 185 (240)
Q Consensus 117 ~e~~~~~~~------~~--~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~--~~~~v~~~P~~~lID~~G~Iv~~~~~~- 185 (240)
.+..++|++ ++ +++||++ .|..+ .+...++...... ..+.....|++||||++|+|+..+.+.
T Consensus 74 ~~~~~~~~~~i~~~~~~~~~~~fpil--~D~~~----~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~ 147 (233)
T 2v2g_A 74 VADHKEWSEDVKCLSGVKGDMPYPII--ADETR----ELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPA 147 (233)
T ss_dssp HHHHHHHHHHHHHHHTCCSSCSSCEE--ECTTC----HHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECT
T ss_pred HHHHHHHHHHHHHhhCcccCCceEEE--ECChH----HHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCC
Confidence 778888887 57 8999999 44332 3444443321000 000011358999999999999987432
Q ss_pred ---CCccchHHHHHHhccc------CCCCcc
Q psy299 186 ---ASPASLIPHIEILGRT------SAIKWN 207 (240)
Q Consensus 186 ---~~~~~l~~~L~~ll~~------~~i~~~ 207 (240)
.+.+++.+.|+.+... -.+.|.
T Consensus 148 ~~gr~~~eilr~l~~Lq~~~~~~~~~p~~W~ 178 (233)
T 2v2g_A 148 TTGRNFSEILRVIDSLQLTAQKKVATPADWQ 178 (233)
T ss_dssp TBCCCHHHHHHHHHHHHHHHHSSEEBCTTCC
T ss_pred CCCCCHHHHHHHHHHHHhhccCCccCCCCcC
Confidence 2456688888877643 256774
No 90
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.88 E-value=2.4e-22 Score=167.36 Aligned_cols=149 Identities=9% Similarity=0.097 Sum_probs=113.8
Q ss_pred ccccccCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCC-CCCcH-----HHHHHHHHHHHHHhhcCcEEEEeecCC
Q psy299 35 ADDSWKNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASR-CGYTG-----KHYKELVELDEKFRDRGLRILAFPCNQ 108 (240)
Q Consensus 35 ~~~~~~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atw-Cp~C~-----~~~~~L~~l~~~~~~~~v~vi~Vs~D~ 108 (240)
....+.+|+++|+|+|+|.+|+.++|++++||++||+||++| ||+|. .+++.|+++ + +|+.||+||.|
T Consensus 18 ~g~~l~vG~~APdFtL~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~D- 91 (224)
T 3keb_A 18 IGDFPRKGDYLPSFMLVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITVD- 91 (224)
T ss_dssp BSCCCCTTCBCCCCEEEETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEESS-
T ss_pred ecCcCCCCCCCCCeEEECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEECC-
Confidence 344578999999999999999999999999999999999988 99999 999999887 4 58999999987
Q ss_pred CCCCCCCCHHHHHHHHHhcCc-ceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccC---
Q psy299 109 FGGQEPGDADQICEFTKKKNV-QFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAA--- 184 (240)
Q Consensus 109 ~~~~~~~~~e~~~~~~~~~~~-~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~--- 184 (240)
+++..++|++++++ +||++ .|... ..+.+.++.........+ ...|++||||++|+|++.+..
T Consensus 92 -------s~~~~~~f~~~~gl~~fplL--sD~~~---~~vak~yGv~~~~~~~~G-~~~p~tfvID~dG~I~~~~~~~~~ 158 (224)
T 3keb_A 92 -------SPSSLARARHEHGLPNIALL--STLRG---RDFHKRYGVLITEYPLSG-YTSPAIILADAANVVHYSERLANT 158 (224)
T ss_dssp -------CHHHHHHHHHHHCCTTCEEE--ESTTC---TTHHHHTTCBCCSTTSTT-CBCCEEEEECTTCBEEEEEECSBT
T ss_pred -------CHHHHHHHHHHcCCCCceEE--EcCCc---hHHHHHhCCccccccccC-CccCEEEEEcCCCEEEEEEecCCC
Confidence 89999999999999 69999 44421 123344433221000001 125899999999999987642
Q ss_pred --CCCccchHHHHHHhcccC
Q psy299 185 --NASPASLIPHIEILGRTS 202 (240)
Q Consensus 185 --~~~~~~l~~~L~~ll~~~ 202 (240)
..+.+++.+.|+.+....
T Consensus 159 ~~~pd~~evl~~L~~l~~~~ 178 (224)
T 3keb_A 159 RDFFDFDAIEKLLQEGEQQA 178 (224)
T ss_dssp TCCCCHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHhhhcc
Confidence 234566888888777554
No 91
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.88 E-value=8.5e-23 Score=157.54 Aligned_cols=121 Identities=13% Similarity=0.136 Sum_probs=100.0
Q ss_pred CCcccCC-eEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhh-cCcEEEEeecCCCCCCCCCCHH
Q psy299 41 NAETVYD-FTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRD-RGLRILAFPCNQFGGQEPGDAD 118 (240)
Q Consensus 41 ~g~~~p~-f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~-~~v~vi~Vs~D~~~~~~~~~~e 118 (240)
.|+.+|+ |++++.+|+.+++++++||++||+||++||++|+.++|.|+++++++++ .++.|++|++| ++.+
T Consensus 3 ~~~~~P~~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d-------~~~~ 75 (144)
T 1i5g_A 3 LKKFFPYSTNVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWD-------ESAE 75 (144)
T ss_dssp TTTSCSSCSEEEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC-------SSHH
T ss_pred hhhhCCCceEEEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCC-------CCHH
Confidence 5788999 9999999999999999999999999999999999999999999999995 58999999988 4789
Q ss_pred HHHHHHHhcCc-ceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEc-CCCCeEEecc
Q psy299 119 QICEFTKKKNV-QFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVD-KNGVPVERHA 183 (240)
Q Consensus 119 ~~~~~~~~~~~-~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID-~~G~Iv~~~~ 183 (240)
.+++++++++. .+|+.. .+....+.+.+ ++..+|+++||| ++|+|+.++.
T Consensus 76 ~~~~~~~~~~~~~~~~~~-----~d~~~~~~~~~----------~v~~~P~~~lid~~~G~i~~~~~ 127 (144)
T 1i5g_A 76 DFKDYYAKMPWLALPFED-----RKGMEFLTTGF----------DVKSIPTLVGVEADSGNIITTQA 127 (144)
T ss_dssp HHHHHHTTCSSEECCTTC-----HHHHHHHHHHT----------TCCSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHHHhCCccccccCc-----hHHHHHHHHHc----------CCCCCCEEEEEECCCCcEEeccc
Confidence 99999998774 445430 01112233332 566779999999 9999998763
No 92
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.88 E-value=1.5e-22 Score=168.62 Aligned_cols=147 Identities=14% Similarity=0.158 Sum_probs=111.4
Q ss_pred ccCCcccCCeEeecC--CCCcccCCCCCCc--EEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCC
Q psy299 39 WKNAETVYDFTVKNI--KGEDVPLSTYKGH--VLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEP 114 (240)
Q Consensus 39 ~~~g~~~p~f~l~d~--~G~~v~ls~~~gk--~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~ 114 (240)
+..|+++|+|++.+. +| .++|++++|| ++|++||++|||+|..+++.|++++++|+++|++||+||+|
T Consensus 3 l~iG~~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D------- 74 (220)
T 1xcc_A 3 YHLGATFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCN------- 74 (220)
T ss_dssp CCTTCBCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESS-------
T ss_pred CCCCCCCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCC-------
Confidence 568999999999999 99 8999999998 45556699999999999999999999999999999999987
Q ss_pred CCHHHHHHHHH-------hcCcceeeeEeeecCCCCCchHHHHHhhhcCCc-cccc-ccccceEEEEcCCCCeEEeccCC
Q psy299 115 GDADQICEFTK-------KKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGT-LVDA-IKWNFTKFIVDKNGVPVERHAAN 185 (240)
Q Consensus 115 ~~~e~~~~~~~-------~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~-~~~~-v~~~P~~~lID~~G~Iv~~~~~~ 185 (240)
+.+..++|.+ +++++||++ .|..+ .+.+.++...... ...+ ....|++||||++|+|+..+.+.
T Consensus 75 -~~~~~~~~~~~i~~~~~~~~~~fpil--~D~~~----~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~ 147 (220)
T 1xcc_A 75 -SKESHDKWIEDIKYYGKLNKWEIPIV--CDESR----ELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYP 147 (220)
T ss_dssp -CHHHHHHHHHHHHHHHTCSCCCCCEE--ECTTS----HHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEEC
T ss_pred -CHHHHHHHHHHHHHHhcCCCCcceeE--ECchh----HHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecC
Confidence 5666777766 588999998 44332 3444444321000 0001 12358999999999999987432
Q ss_pred ----CCccchHHHHHHhcc
Q psy299 186 ----ASPASLIPHIEILGR 200 (240)
Q Consensus 186 ----~~~~~l~~~L~~ll~ 200 (240)
.+.+++.+.|+.+..
T Consensus 148 ~~~g~~~~ell~~i~~lq~ 166 (220)
T 1xcc_A 148 ATTGRNAHEILRVLKSLQL 166 (220)
T ss_dssp TTBCCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHh
Confidence 245668888888764
No 93
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.87 E-value=5.3e-23 Score=163.38 Aligned_cols=126 Identities=16% Similarity=0.168 Sum_probs=100.5
Q ss_pred ccccccCCcccCCe-EeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhh-cCcEEEEeecCCCCCC
Q psy299 35 ADDSWKNAETVYDF-TVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRD-RGLRILAFPCNQFGGQ 112 (240)
Q Consensus 35 ~~~~~~~g~~~p~f-~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~-~~v~vi~Vs~D~~~~~ 112 (240)
......+|.++|+| .+++.+| .+++++++||++||+||++||++|+.++|.|++++++|++ .++.||+|++|
T Consensus 18 ~~~~~~vG~~~P~f~~l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d----- 91 (165)
T 3s9f_A 18 GSHMSGVAKHLGEALKLRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWD----- 91 (165)
T ss_dssp ----CHHHHHHHHTSCEEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC-----
T ss_pred chhhhhhcccCCcceeeecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecC-----
Confidence 34455799999999 9999999 9999999999999999999999999999999999999997 58999999998
Q ss_pred CCCCHHHHHHHHHhcCc-ceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCC-CCeEEecc
Q psy299 113 EPGDADQICEFTKKKNV-QFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKN-GVPVERHA 183 (240)
Q Consensus 113 ~~~~~e~~~~~~~~~~~-~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~-G~Iv~~~~ 183 (240)
++.+.+++++++++. .+|+.. ......+.+.+ ++..+|++||||++ |+|+.+..
T Consensus 92 --~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~----------~v~~~Pt~~lid~~~G~iv~~~~ 147 (165)
T 3s9f_A 92 --EEEDDFNAYYAKMPWLSIPFAN-----RNIVEALTKKY----------SVESIPTLIGLNADTGDTVTTRA 147 (165)
T ss_dssp --CSHHHHHHHHTTCSSEECCTTC-----HHHHHHHHHHT----------TCCSSSEEEEEETTTCCEEESCH
T ss_pred --CCHHHHHHHHHhCCCcccccCc-----hhHHHHHHHHc----------CCCCCCEEEEEeCCCCEEEeccc
Confidence 578999999998763 333331 00012233332 56778999999998 99998763
No 94
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.87 E-value=6.2e-22 Score=158.43 Aligned_cols=131 Identities=13% Similarity=0.204 Sum_probs=100.7
Q ss_pred cCCcccCCeEeecC----CC-----CcccCCCC-CCc-EEEEEEecCCCCCcHHH-HHHHHHHHHHHhhcCcE-EEEeec
Q psy299 40 KNAETVYDFTVKNI----KG-----EDVPLSTY-KGH-VLVIVNVASRCGYTGKH-YKELVELDEKFRDRGLR-ILAFPC 106 (240)
Q Consensus 40 ~~g~~~p~f~l~d~----~G-----~~v~ls~~-~gk-~vlv~F~atwCp~C~~~-~~~L~~l~~~~~~~~v~-vi~Vs~ 106 (240)
..|+++|+|++++. +| +.++|+++ +|| ++|++||++|||+|+.+ +|.|++++++|+++|+. |++||.
T Consensus 8 ~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~ 87 (171)
T 2pwj_A 8 DILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAI 87 (171)
T ss_dssp --CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEES
T ss_pred cccCcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 46779999999998 57 89999996 996 67788999999999999 99999999999999999 999998
Q ss_pred CCCCCCCCCCHHHHHHHHHhcCc--ceeeeEeeecCCCCCchHHHHHhhhcCCc-ccccccccceEEEEcCCCCeEEecc
Q psy299 107 NQFGGQEPGDADQICEFTKKKNV--QFDLFEKINVNGDNAHPLWKFLKHKQGGT-LVDAIKWNFTKFIVDKNGVPVERHA 183 (240)
Q Consensus 107 D~~~~~~~~~~e~~~~~~~~~~~--~fp~~~~~d~~~~~~~~l~~~~~~~~~~~-~~~~v~~~P~~~lID~~G~Iv~~~~ 183 (240)
| +.+.+++|++++++ +||++ .|..+ .+.+.++...... .+.+++..|++|+|| +|+|++.+.
T Consensus 88 d--------~~~~~~~~~~~~~~~~~fp~l--~D~~~----~~~~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~~~ 152 (171)
T 2pwj_A 88 N--------DPYTVNAWAEKIQAKDAIEFY--GDFDG----SFHKSLELTTDLSAGLLGIRSERWSAYVV-DGKVKALNV 152 (171)
T ss_dssp S--------CHHHHHHHHHHTTCTTTSEEE--ECTTC----HHHHHHTCEEECTTTTCCEEECCEEEEEE-TTEEEEEEE
T ss_pred C--------CHHHHHHHHHHhCCCCceEEE--ECCcc----HHHHHhCCccccccccCCcccceeEEEEE-CCEEEEEEe
Confidence 7 68899999999996 79998 44433 2334443321100 001222346789999 999999886
Q ss_pred CC
Q psy299 184 AN 185 (240)
Q Consensus 184 ~~ 185 (240)
+.
T Consensus 153 ~~ 154 (171)
T 2pwj_A 153 EE 154 (171)
T ss_dssp CS
T ss_pred ec
Confidence 54
No 95
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.87 E-value=6.5e-22 Score=166.18 Aligned_cols=133 Identities=17% Similarity=0.204 Sum_probs=106.1
Q ss_pred ccCCcccCCeEeecC-CCC--cccCCC-CCCcEEEEEEe-cCCCCCcH-HHHHHHHHHHHHHhhcCc-EEEEeecCCCCC
Q psy299 39 WKNAETVYDFTVKNI-KGE--DVPLST-YKGHVLVIVNV-ASRCGYTG-KHYKELVELDEKFRDRGL-RILAFPCNQFGG 111 (240)
Q Consensus 39 ~~~g~~~p~f~l~d~-~G~--~v~ls~-~~gk~vlv~F~-atwCp~C~-~~~~~L~~l~~~~~~~~v-~vi~Vs~D~~~~ 111 (240)
+.+|+++|+|++++. +|+ .++|++ ++||++||+|| ++|||+|+ .++|.|++++++|+++|+ .|++||.|
T Consensus 3 ~~~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d---- 78 (241)
T 1nm3_A 3 SMEGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVN---- 78 (241)
T ss_dssp CCTTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESS----
T ss_pred ccCCCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcC----
Confidence 468999999999997 777 899999 99999999999 99999999 999999999999999999 99999987
Q ss_pred CCCCCHHHHHHHHHhcCcc-eeeeEeeecCCCCCchHHHHHhhhcCCc-ccccccccceEEEEcCCCCeEEeccCCC
Q psy299 112 QEPGDADQICEFTKKKNVQ-FDLFEKINVNGDNAHPLWKFLKHKQGGT-LVDAIKWNFTKFIVDKNGVPVERHAANA 186 (240)
Q Consensus 112 ~~~~~~e~~~~~~~~~~~~-fp~~~~~d~~~~~~~~l~~~~~~~~~~~-~~~~v~~~P~~~lID~~G~Iv~~~~~~~ 186 (240)
+.+.+++|+++++++ ||++ .|..+ .+...++...... .+...+..|++||| ++|+|++.+.+..
T Consensus 79 ----~~~~~~~~~~~~~~~~~~~l--~D~~~----~~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~~~~ 144 (241)
T 1nm3_A 79 ----DTFVMNAWKEDEKSENISFI--PDGNG----EFTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFIEPN 144 (241)
T ss_dssp ----CHHHHHHHHHHTTCTTSEEE--ECTTS----HHHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEEECCS
T ss_pred ----CHHHHHHHHHhcCCCceEEE--ECCCc----HHHHHhCceeecccccCcccceeEEEEE-ECCEEEEEEEecc
Confidence 688999999999997 9998 44332 3444443321100 00011234899999 9999999886643
No 96
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.86 E-value=4.7e-22 Score=168.39 Aligned_cols=151 Identities=15% Similarity=0.180 Sum_probs=115.6
Q ss_pred cccCCcccCCeEeecCCCCcccC-CCC--CCcEE-EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCC
Q psy299 38 SWKNAETVYDFTVKNIKGEDVPL-STY--KGHVL-VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQE 113 (240)
Q Consensus 38 ~~~~g~~~p~f~l~d~~G~~v~l-s~~--~gk~v-lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~ 113 (240)
.+..|+++|+|++.+.+| .++| +++ +||++ |++||++|||+|..+++.|++++++|+++|+.||+||+|
T Consensus 4 ~~~iG~~aPdF~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~D------ 76 (249)
T 3a2v_A 4 IPLIGERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVD------ 76 (249)
T ss_dssp ECCTTSBCCCEEEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESS------
T ss_pred cCCCCCCCCCeEEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECC------
Confidence 346899999999999999 7999 999 99974 567899999999999999999999999999999999987
Q ss_pred CCCHHHHHHHHHh------cCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCC-
Q psy299 114 PGDADQICEFTKK------KNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANA- 186 (240)
Q Consensus 114 ~~~~e~~~~~~~~------~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~- 186 (240)
+.+...++.+. .+++||++ .|..+ .+...++...... ++..+|++||||++|+|+....+..
T Consensus 77 --s~~~~~~w~~~~~~~~~~~i~fPil--~D~~~----~ia~~ygv~~~~~---g~~~~p~~fIID~dG~I~~~~~~~~~ 145 (249)
T 3a2v_A 77 --SVFSHIKWKEWIERHIGVRIPFPII--ADPQG----TVARRLGLLHAES---ATHTVRGVFIVDARGVIRTMLYYPME 145 (249)
T ss_dssp --CHHHHHHHHHHHHHHTCCCCCSCEE--ECTTS----HHHHHHTCCCTTC---SSSCCEEEEEECTTSBEEEEEEECTT
T ss_pred --CHHHHHHHHHHHHHhcCCCCceeEE--ECCch----HHHHHhCCccccC---CCcccceEEEECCCCeEEEEEecCCc
Confidence 56666666553 58899998 34322 3444444321110 1225689999999999999875443
Q ss_pred ---CccchHHHHHHhccc------CCCCc
Q psy299 187 ---SPASLIPHIEILGRT------SAIKW 206 (240)
Q Consensus 187 ---~~~~l~~~L~~ll~~------~~i~~ 206 (240)
+.+++...|+.+... -++.|
T Consensus 146 ~gr~~~Ellr~I~alq~~~~~~~~~Pa~W 174 (249)
T 3a2v_A 146 LGRLVDEILRIVKALKLGDSLKRAVPADW 174 (249)
T ss_dssp BCCCHHHHHHHHHHHHHHHHHTCBBCTTT
T ss_pred ccchhHHHHHHHHHHHhccccCccCCCCC
Confidence 456788888887632 26688
No 97
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.86 E-value=3e-22 Score=154.91 Aligned_cols=121 Identities=17% Similarity=0.223 Sum_probs=99.2
Q ss_pred cCCcccCC-eEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhh-cCcEEEEeecCCCCCCCCCCH
Q psy299 40 KNAETVYD-FTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRD-RGLRILAFPCNQFGGQEPGDA 117 (240)
Q Consensus 40 ~~g~~~p~-f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~-~~v~vi~Vs~D~~~~~~~~~~ 117 (240)
..|+.+|+ |+++|.+| .+++++++||++||+||++||++|+.++|.|+++++++++ .++.|++|++| ++.
T Consensus 3 ~~~~~~P~~f~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d-------~~~ 74 (146)
T 1o8x_A 3 GLDKYLPGIEKLRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWD-------EEE 74 (146)
T ss_dssp CGGGTSTTCCEEEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC-------CSH
T ss_pred chHhhCCCceEEEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCC-------CCH
Confidence 46788999 99999999 9999999999999999999999999999999999999994 58999999988 478
Q ss_pred HHHHHHHHhcCc-ceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEc-CCCCeEEecc
Q psy299 118 DQICEFTKKKNV-QFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVD-KNGVPVERHA 183 (240)
Q Consensus 118 e~~~~~~~~~~~-~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID-~~G~Iv~~~~ 183 (240)
+.+++++++++. .+|+.. .+....+.+.+ ++..+|+++||| ++|+|+.+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~-----~d~~~~~~~~~----------~v~~~Pt~~lid~~~G~i~~~~~ 127 (146)
T 1o8x_A 75 DGFAGYFAKMPWLAVPFAQ-----SEAVQKLSKHF----------NVESIPTLIGVDADSGDVVTTRA 127 (146)
T ss_dssp HHHHHHHTTCSSEECCGGG-----HHHHHHHHHHT----------TCCSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHHHHHCCceeeccch-----hhHHHHHHHHh----------CCCCCCEEEEEECCCCeEEEecc
Confidence 999999998773 445430 01111233322 466779999999 9999998764
No 98
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.86 E-value=4.9e-22 Score=152.93 Aligned_cols=121 Identities=15% Similarity=0.180 Sum_probs=98.4
Q ss_pred cCCcccCCe-EeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHh-hcCcEEEEeecCCCCCCCCCCH
Q psy299 40 KNAETVYDF-TVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFR-DRGLRILAFPCNQFGGQEPGDA 117 (240)
Q Consensus 40 ~~g~~~p~f-~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~-~~~v~vi~Vs~D~~~~~~~~~~ 117 (240)
..|+.+|+| +++|.+| .+++++++||++||+||++||++|+.++|.|++++++++ +.++.+++|++| .+.
T Consensus 3 ~~g~~~p~~~~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d-------~~~ 74 (144)
T 1o73_A 3 GLAKYLPGATNLLSKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWD-------ENE 74 (144)
T ss_dssp GGGGTSCTTCCBBCTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC-------SSH
T ss_pred chhhhCccceEeecCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCC-------CCH
Confidence 578899997 9999999 999999999999999999999999999999999999998 358999999988 478
Q ss_pred HHHHHHHHhcCc-ceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEc-CCCCeEEecc
Q psy299 118 DQICEFTKKKNV-QFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVD-KNGVPVERHA 183 (240)
Q Consensus 118 e~~~~~~~~~~~-~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID-~~G~Iv~~~~ 183 (240)
+.+++++++++. .+|+. ..+....+.+.+ ++..+|+++||| ++|+|+.+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~----------~v~~~Pt~~lid~~~G~i~~~~~ 127 (144)
T 1o73_A 75 SDFHDYYGKMPWLALPFD-----QRSTVSELGKTF----------GVESIPTLITINADTGAIIGTQA 127 (144)
T ss_dssp HHHHHHHTTCSSEECCTT-----CHHHHHHHHHHH----------TCCSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHHHHhCCceEeecc-----chhHHHHHHHHc----------CCCCCCEEEEEECCCCeEEecch
Confidence 899999988763 33332 001112233333 566789999999 8999998763
No 99
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.77 E-value=1.8e-23 Score=160.54 Aligned_cols=122 Identities=12% Similarity=0.116 Sum_probs=99.2
Q ss_pred cccCCeEeecCCCCcccCCC-CCCc-EEEEEEecCCCCCcHHHHHHHHHHHHHHhh--cCcEEEEeecCCCCCCCCCCHH
Q psy299 43 ETVYDFTVKNIKGEDVPLST-YKGH-VLVIVNVASRCGYTGKHYKELVELDEKFRD--RGLRILAFPCNQFGGQEPGDAD 118 (240)
Q Consensus 43 ~~~p~f~l~d~~G~~v~ls~-~~gk-~vlv~F~atwCp~C~~~~~~L~~l~~~~~~--~~v~vi~Vs~D~~~~~~~~~~e 118 (240)
+.+|+|++++.+|+.+++++ ++|| ++||+||++|||+|+.++|.|+++++++++ .++.+++|++| ++.+
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d-------~~~~ 74 (143)
T 2lus_A 2 EFIQGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSD-------RSED 74 (143)
Confidence 35799999999999999999 9999 999999999999999999999999999953 47999999988 4678
Q ss_pred HHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccC
Q psy299 119 QICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAA 184 (240)
Q Consensus 119 ~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~ 184 (240)
.+++++++++++|+.+.... +....+...+ ++..+|+++|||++|+|+.+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~----------~v~~~P~~~lid~~G~i~~~~~~ 127 (143)
T 2lus_A 75 DMFQYMMESHGDWLAIPYRS---GPASNVTAKY----------GITGIPALVIVKKDGTLISMNGR 127 (143)
Confidence 89999999999987662111 1111222222 46667999999999999988644
No 100
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.86 E-value=6.6e-22 Score=163.98 Aligned_cols=167 Identities=13% Similarity=0.133 Sum_probs=112.1
Q ss_pred cccccccccccCCcccCCeE----eecCCCCcccCCCCCCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEe
Q psy299 30 DFTSMADDSWKNAETVYDFT----VKNIKGEDVPLSTYKGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAF 104 (240)
Q Consensus 30 ~~~~~~~~~~~~g~~~p~f~----l~d~~G~~v~ls~~~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~V 104 (240)
+...+....+.+|+++|+|+ +.|.+|+.++|++++||++||+|| +.|||.|..|+..+++++++|+++|++||+|
T Consensus 17 ~g~~m~~~~~~vG~~APdF~~~a~l~d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigi 96 (219)
T 3tue_A 17 RGSHMSCGNAKINSPAPSFEEVALMPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLAC 96 (219)
T ss_dssp -------CCCCTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEE
T ss_pred CCCcCcccccccCCcCCCCcccccccCCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEe
Confidence 33344455678999999999 558899999999999999999999 8899999999999999999999999999999
Q ss_pred ecCCCCCCCCCCHHHHHHHHHhc-------CcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCC
Q psy299 105 PCNQFGGQEPGDADQICEFTKKK-------NVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGV 177 (240)
Q Consensus 105 s~D~~~~~~~~~~e~~~~~~~~~-------~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~ 177 (240)
|+| +....++|.++. +++||++ .|..+. +.+.++.... ..+...+ .+||||++|+
T Consensus 97 S~D--------s~~sh~~w~~~~~~~~~~~~l~fpll--sD~~~~----va~~yGv~~~-~~g~~~R---~tFiIDp~g~ 158 (219)
T 3tue_A 97 SID--------SEYAHLQWTLQDRKKGGLGTMAIPIL--ADKTKN----IARSYGVLEE-SQGVAYR---GLFIIDPHGM 158 (219)
T ss_dssp ESS--------CHHHHHHHHHSCGGGTCCCSCSSCEE--ECTTSH----HHHHTTCEET-TTTEECE---EEEEECTTSB
T ss_pred eCC--------chhhHHHHhhhhHHhcCccccccccc--cCcccH----HHHHcCCccc-CCCeeEE---EEEEECCCCe
Confidence 998 899999998764 6789999 444443 3334333211 0111333 5699999999
Q ss_pred eEEeccCCC----CccchHHHHHHhcc------cCCCCcceeEEEEc
Q psy299 178 PVERHAANA----SPASLIPHIEILGR------TSAIKWNFTKFIVD 214 (240)
Q Consensus 178 Iv~~~~~~~----~~~~l~~~L~~ll~------~~~i~~~~~~~~i~ 214 (240)
|+..+.... +.+++.+.|+.|-- .-+..|.=..-+|-
T Consensus 159 Ir~~~~~~~~~gr~~~EvLr~l~aLQ~~~~~~~~~Pa~W~~G~~~i~ 205 (219)
T 3tue_A 159 LRQITVNDMPVGRSVEEVLRLLEAFQFVEKHGEVCPANWKKGDPGMK 205 (219)
T ss_dssp EEEEEEECTTCCCCHHHHHHHHHHHHHHHHC----------------
T ss_pred EEEEEEecCCCCCCHHHHHHHHHHhhhHHhcCCCcCCCCCCCCcccc
Confidence 998763222 33456566665541 12568876655554
No 101
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.4e-21 Score=161.76 Aligned_cols=143 Identities=16% Similarity=0.167 Sum_probs=109.4
Q ss_pred ccCCcccCCeEee---cCCCCcccCCCCCCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCC
Q psy299 39 WKNAETVYDFTVK---NIKGEDVPLSTYKGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEP 114 (240)
Q Consensus 39 ~~~g~~~p~f~l~---d~~G~~v~ls~~~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~ 114 (240)
+.+|+++|+|+++ |.+|+.++|++++||++||+|| +.|||+|..+++.+++.+++|+++|++|++||+|
T Consensus 23 ~~VG~~APdF~l~a~~d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~D------- 95 (216)
T 3sbc_A 23 AQVQKQAPTFKKTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTD------- 95 (216)
T ss_dssp CCTTSBCCCCCEEEEETTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESS-------
T ss_pred hhcCCcCCCCCCcceECCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecC-------
Confidence 4799999999976 6777899999999999999999 9999999999999999999999999999999987
Q ss_pred CCHHHHHHHHHhc-------CcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCC-
Q psy299 115 GDADQICEFTKKK-------NVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANA- 186 (240)
Q Consensus 115 ~~~e~~~~~~~~~-------~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~- 186 (240)
+....++|.+.. +++||++ .|..+. +.+.++..... .+... +.+||||++|+|++......
T Consensus 96 -s~~sh~aw~~~~~~~~~~~~l~fpll--sD~~~~----vak~YGv~~~~-~g~~~---R~tFiID~~G~Ir~~~v~~~~ 164 (216)
T 3sbc_A 96 -SEYSLLAWTNIPRKEGGLGPINIPLL--ADTNHS----LSRDYGVLIEE-EGVAL---RGLFIIDPKGVIRHITINDLP 164 (216)
T ss_dssp -CHHHHHHHHTSCGGGTCCCSCSSCEE--ECTTSH----HHHHHTCEETT-TTEEC---EEEEEECTTSBEEEEEEECTT
T ss_pred -chhhHHHHHHHHHHhCCccCcccceE--eCCCCH----HHHHcCCeecc-CCcee---eEEEEECCCCeEEEEEEcCCC
Confidence 889999998754 5889999 444433 33333332110 11122 47899999999998663322
Q ss_pred ---CccchHHHHHHhc
Q psy299 187 ---SPASLIPHIEILG 199 (240)
Q Consensus 187 ---~~~~l~~~L~~ll 199 (240)
+.+++...|+.|-
T Consensus 165 ~grn~dEiLr~l~AlQ 180 (216)
T 3sbc_A 165 VGRNVDEALRLVEAFQ 180 (216)
T ss_dssp BCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhh
Confidence 3445555555543
No 102
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.82 E-value=4.6e-20 Score=161.78 Aligned_cols=165 Identities=12% Similarity=0.172 Sum_probs=119.1
Q ss_pred cccCCeEeecCCCCcccCCCCCCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHH
Q psy299 43 ETVYDFTVKNIKGEDVPLSTYKGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQIC 121 (240)
Q Consensus 43 ~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~ 121 (240)
.++|+|+|+|.+|+.++|+|++||++||+|| +.|||.|..+++.+++ ....++.|++||.| +++..+
T Consensus 2 ak~p~F~l~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~----~~~~~~~v~gis~D--------~~~~~~ 69 (322)
T 4eo3_A 2 ARVKHFELLTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSR----ENFEKAQVVGISRD--------SVEALK 69 (322)
T ss_dssp CBCCCCEEEETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHH----SCCTTEEEEEEESC--------CHHHHH
T ss_pred CCCCCcEEECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHH----HhhCCCEEEEEeCC--------CHHHHH
Confidence 4689999999999999999999999999999 6799999999988864 23347999999987 899999
Q ss_pred HHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCC---ccchHHHHHHh
Q psy299 122 EFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANAS---PASLIPHIEIL 198 (240)
Q Consensus 122 ~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~---~~~l~~~L~~l 198 (240)
+|+++++++||++ .|..+ .+.+.++....+ ...|++||||++|+|++.+.+... .+++.+.|+++
T Consensus 70 ~f~~~~~l~fp~l--~D~~~----~v~~~ygv~~~~------~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~ 137 (322)
T 4eo3_A 70 RFKEKNDLKVTLL--SDPEG----ILHEFFNVLENG------KTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRL 137 (322)
T ss_dssp HHHHHHTCCSEEE--ECTTC----HHHHHTTCEETT------EECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHH
T ss_pred HHHHhhCCceEEE--EcCch----HHHHhcCCCCCC------cCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhh
Confidence 9999999999999 44443 233444332211 124789999999999998865443 34577777777
Q ss_pred cccCCCCcceeEEEEcCCCCeeeeccCCCCccchhhhh
Q psy299 199 GRTSAIKWNFTKFIVDKNGAPVERHAANASPASLIPNI 236 (240)
Q Consensus 199 l~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 236 (240)
..+. =++.+ .|..+= =+.+|.+.-+|.+.++.|
T Consensus 138 ~~~~---~~~~~-~I~~RR-SiR~F~~~~V~~e~l~~i 170 (322)
T 4eo3_A 138 IEED---LSLNK-HIEWRR-ARRALKKDRVPREELELL 170 (322)
T ss_dssp HHHH---TSCCH-HHHHCC-CCCCBCCCCCCHHHHHHH
T ss_pred chhh---hHHHH-HHHhhh-ccCCcCccccCHHHHHHH
Confidence 6432 11111 122222 223477777776666654
No 103
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.78 E-value=8.6e-19 Score=140.73 Aligned_cols=133 Identities=13% Similarity=0.104 Sum_probs=102.1
Q ss_pred cccCCcccCCeEeecCCC----------CcccCCCC-CCcE-EEEEEecCCCCCcHH-HHHHHHHHHHHHhhcCc-EEEE
Q psy299 38 SWKNAETVYDFTVKNIKG----------EDVPLSTY-KGHV-LVIVNVASRCGYTGK-HYKELVELDEKFRDRGL-RILA 103 (240)
Q Consensus 38 ~~~~g~~~p~f~l~d~~G----------~~v~ls~~-~gk~-vlv~F~atwCp~C~~-~~~~L~~l~~~~~~~~v-~vi~ 103 (240)
..++|+++|+++++-..+ +.++|+++ +||+ +|++||+.|||+|.. ++|.+++.+++|+++|+ .|++
T Consensus 9 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~Vig 88 (176)
T 4f82_A 9 MIQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWC 88 (176)
T ss_dssp CCCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred hhhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 457999999988765433 67899997 9985 456778999999999 99999999999999999 9999
Q ss_pred eecCCCCCCCCCCHHHHHHHHHhcCcc--eeeeEeeecCCCCCchHHHHHhhhcCCc-ccccccccceEEEEcCCCCeEE
Q psy299 104 FPCNQFGGQEPGDADQICEFTKKKNVQ--FDLFEKINVNGDNAHPLWKFLKHKQGGT-LVDAIKWNFTKFIVDKNGVPVE 180 (240)
Q Consensus 104 Vs~D~~~~~~~~~~e~~~~~~~~~~~~--fp~~~~~d~~~~~~~~l~~~~~~~~~~~-~~~~v~~~P~~~lID~~G~Iv~ 180 (240)
||.| ++...++|+++++++ ||++ .|..+ .+.+.++...... .+-+++..+.+||| ++|+|++
T Consensus 89 IS~D--------~~~~~~~f~~~~~l~~~f~lL--sD~~~----~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~ 153 (176)
T 4f82_A 89 VSVN--------DAFVMGAWGRDLHTAGKVRMM--ADGSA----AFTHALGLTQDLSARGMGIRSLRYAMVI-DGGVVKT 153 (176)
T ss_dssp EESS--------CHHHHHHHHHHTTCTTTSEEE--ECTTC----HHHHHHTCEEECGGGTCCEEECCEEEEE-ETTEEEE
T ss_pred EeCC--------CHHHHHHHHHHhCCCCCceEE--EcCch----HHHHHhCCCccccccCCCcccccEEEEE-cCCEEEE
Confidence 9987 899999999999998 9999 44333 3444444322110 11122234678999 9999999
Q ss_pred eccCC
Q psy299 181 RHAAN 185 (240)
Q Consensus 181 ~~~~~ 185 (240)
.+...
T Consensus 154 ~~~~~ 158 (176)
T 4f82_A 154 LAVEA 158 (176)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 87643
No 104
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.72 E-value=4.1e-17 Score=130.52 Aligned_cols=132 Identities=14% Similarity=0.274 Sum_probs=101.5
Q ss_pred ccccCCcccCCeEeecCCC--CcccCCC-CCCcEEEEEEe-cCCCCCcHHHHHHHHHHHHHHhhcCcE-EEEeecCCCCC
Q psy299 37 DSWKNAETVYDFTVKNIKG--EDVPLST-YKGHVLVIVNV-ASRCGYTGKHYKELVELDEKFRDRGLR-ILAFPCNQFGG 111 (240)
Q Consensus 37 ~~~~~g~~~p~f~l~d~~G--~~v~ls~-~~gk~vlv~F~-atwCp~C~~~~~~L~~l~~~~~~~~v~-vi~Vs~D~~~~ 111 (240)
.+.++|+++|+|++.+ +| +.++|++ ++||++||+|+ ..|||.|..+++.+++.+++++++|+. |++||.|
T Consensus 12 ~~~~vGd~aPdf~l~~-~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D---- 86 (171)
T 2xhf_A 12 SPIKVGDIIPDVLVYE-DVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVN---- 86 (171)
T ss_dssp CCCCTTCBCCCCEEEC-SSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESS----
T ss_pred CcccCcCCCCCeEEec-CCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCC----
Confidence 4568999999999994 44 8999999 59999888887 779999999999999999999999996 9999987
Q ss_pred CCCCCHHHHHHHHHhcCc--ceeeeEeeecCCCCCchHHHHHhhhcCCc-ccccccccceEEEEcCCCCeEEeccC
Q psy299 112 QEPGDADQICEFTKKKNV--QFDLFEKINVNGDNAHPLWKFLKHKQGGT-LVDAIKWNFTKFIVDKNGVPVERHAA 184 (240)
Q Consensus 112 ~~~~~~e~~~~~~~~~~~--~fp~~~~~d~~~~~~~~l~~~~~~~~~~~-~~~~v~~~P~~~lID~~G~Iv~~~~~ 184 (240)
++...++|.++.++ +||++ .|..+ .+.+.++...... .+......-.+|||| +|+|++.+..
T Consensus 87 ----~~~~~~~w~~~~~~~~~f~lL--SD~~~----~~a~ayGv~~~~~~~g~g~~~~R~tfvId-dG~V~~~~v~ 151 (171)
T 2xhf_A 87 ----DPFVMAAWGKTVDPEHKIRML--ADMHG----EFTRALGTELDSSKMLGNNRSRRYAMLID-DNKIRSVSTE 151 (171)
T ss_dssp ----CHHHHHHHHHHHCTTCCSEEE--ECTTS----HHHHHHTCBCCCHHHHSSCCBCCEEEEEE-TTEEEEEEET
T ss_pred ----CHHHHHHHHHhcCCCCCeEEE--EeCCc----hHHHHhCCceeccccCCCcceEEEEEEEe-CCEEEEEEEe
Confidence 89999999999999 89999 44333 3334444322110 000111112579999 9999998854
No 105
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.71 E-value=1.9e-17 Score=133.74 Aligned_cols=130 Identities=11% Similarity=0.137 Sum_probs=98.2
Q ss_pred cCCcccCCeEeec--C---------CC----CcccCCC-CCCcEEEEEEe-cCCCCCcH-HHHHHHHHHHHHH-hhcCcE
Q psy299 40 KNAETVYDFTVKN--I---------KG----EDVPLST-YKGHVLVIVNV-ASRCGYTG-KHYKELVELDEKF-RDRGLR 100 (240)
Q Consensus 40 ~~g~~~p~f~l~d--~---------~G----~~v~ls~-~~gk~vlv~F~-atwCp~C~-~~~~~L~~l~~~~-~~~~v~ 100 (240)
.+|+++|+|++.+ . +| +.++|++ ++||++||+|+ +.|||.|. .+++.+++.++++ +++|+.
T Consensus 2 ~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~ 81 (182)
T 1xiy_A 2 KENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFD 81 (182)
T ss_dssp CTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCS
T ss_pred CCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCc
Confidence 5799999999998 4 67 7899998 79998888776 88999999 9999999999999 999995
Q ss_pred -EEEeecCCCCCCCCCCHHHHHHHHHhcCc-ceeeeEeeecCCCCCchHHHHHhhhcCCc-ccccccccceEEEEcCCCC
Q psy299 101 -ILAFPCNQFGGQEPGDADQICEFTKKKNV-QFDLFEKINVNGDNAHPLWKFLKHKQGGT-LVDAIKWNFTKFIVDKNGV 177 (240)
Q Consensus 101 -vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~-~fp~~~~~d~~~~~~~~l~~~~~~~~~~~-~~~~v~~~P~~~lID~~G~ 177 (240)
|++||.| ++...++|.+++++ +||++. |..+ .+.+.++...... .+.+.+....+|||| +|+
T Consensus 82 ~V~gvS~D--------~~~~~~~~~~~~~~~~f~lLs--D~~~----~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG~ 146 (182)
T 1xiy_A 82 DIYCITNN--------DIYVLKSWFKSMDIKKIKYIS--DGNS----SFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNI 146 (182)
T ss_dssp EEEEEESS--------CHHHHHHHHHHTTCCSSEEEE--CTTS----HHHHHTTCEEECGGGTCCEEECCEEEEEE-TTE
T ss_pred EEEEEeCC--------CHHHHHHHHHHcCCCCceEEE--eCch----HHHHHhCCceeccccCCCCceEEEEEEEc-CCE
Confidence 9999987 89999999999999 699994 4333 3334444321100 010111223679999 999
Q ss_pred eEEeccC
Q psy299 178 PVERHAA 184 (240)
Q Consensus 178 Iv~~~~~ 184 (240)
|++.+..
T Consensus 147 V~~~~v~ 153 (182)
T 1xiy_A 147 LVKMFQE 153 (182)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 9998743
No 106
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.67 E-value=2.2e-17 Score=126.19 Aligned_cols=117 Identities=16% Similarity=0.143 Sum_probs=88.2
Q ss_pred ccCCcccCCeE-eecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHH---HHHHHHHhhcCcEEEEeecCCCCCCCC
Q psy299 39 WKNAETVYDFT-VKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKEL---VELDEKFRDRGLRILAFPCNQFGGQEP 114 (240)
Q Consensus 39 ~~~g~~~p~f~-l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L---~~l~~~~~~~~v~vi~Vs~D~~~~~~~ 114 (240)
...|..+|+|. +.+.++....+++.+||++||+||++||++|+...|.+ .++.++++ ++.++.|+++.
T Consensus 4 ~~~~~~~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~------ 75 (134)
T 2fwh_A 4 TAQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTA------ 75 (134)
T ss_dssp ------CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTT------
T ss_pred ccccccCCCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCC------
Confidence 46778899998 77777777778888899999999999999999999999 88888886 49999998762
Q ss_pred CCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeE--EeccCCCCccchH
Q psy299 115 GDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPV--ERHAANASPASLI 192 (240)
Q Consensus 115 ~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv--~~~~~~~~~~~l~ 192 (240)
..+...+++++++ +..+|+++++|++|+++ .++.|..+.++|.
T Consensus 76 -~~~~~~~l~~~~~----------------------------------v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~ 120 (134)
T 2fwh_A 76 -NDAQDVALLKHLN----------------------------------VLGLPTILFFDGQGQEHPQARVTGFMDAETFS 120 (134)
T ss_dssp -CCHHHHHHHHHTT----------------------------------CCSSSEEEEECTTSCBCGGGCBCSCCCHHHHH
T ss_pred -CcchHHHHHHHcC----------------------------------CCCCCEEEEECCCCCEeeeeeeeeccCHHHHH
Confidence 2233344444443 34458999999999998 6788888888888
Q ss_pred HHHHHh
Q psy299 193 PHIEIL 198 (240)
Q Consensus 193 ~~L~~l 198 (240)
+.|+++
T Consensus 121 ~~l~~~ 126 (134)
T 2fwh_A 121 AHLRDR 126 (134)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 887764
No 107
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.66 E-value=1.7e-16 Score=119.47 Aligned_cols=113 Identities=15% Similarity=0.123 Sum_probs=89.9
Q ss_pred ccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEee--cCCCCCCCCCCHHHHH
Q psy299 44 TVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFP--CNQFGGQEPGDADQIC 121 (240)
Q Consensus 44 ~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs--~D~~~~~~~~~~e~~~ 121 (240)
.+++++..+.+|........+||++||.||++||++|+...|.+.++.++++ .++.++.|+ +| . -.
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~~d--------~---~~ 72 (126)
T 2l57_A 5 GIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-GKFNIYYARLEEE--------K---NI 72 (126)
T ss_dssp CSSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETTSS--------H---HH
T ss_pred ccCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCCCC--------c---hH
Confidence 4566666777776665666789999999999999999999999999999997 469999998 43 1 11
Q ss_pred HHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhccc
Q psy299 122 EFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 122 ~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
++++++ ++..+|+++++|++|+++.++.|..+.++|.+.|++++..
T Consensus 73 ~~~~~~----------------------------------~v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 73 DLAYKY----------------------------------DANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVK 118 (126)
T ss_dssp HHHHHT----------------------------------TCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCCC
T ss_pred HHHHHc----------------------------------CCcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhcc
Confidence 222222 3445589999999999999998888888999999998866
Q ss_pred C
Q psy299 202 S 202 (240)
Q Consensus 202 ~ 202 (240)
.
T Consensus 119 ~ 119 (126)
T 2l57_A 119 E 119 (126)
T ss_dssp C
T ss_pred c
Confidence 5
No 108
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.66 E-value=6.7e-16 Score=118.30 Aligned_cols=105 Identities=15% Similarity=0.157 Sum_probs=86.6
Q ss_pred eecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCc
Q psy299 50 VKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNV 129 (240)
Q Consensus 50 l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~ 129 (240)
+.+.+|....++.++|+++||.||++||++|+...|.+.++.++++++ +.++.|.+| .+. ++++++
T Consensus 36 l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~-------~~~----~~~~~~-- 101 (141)
T 3hxs_A 36 IADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK-IYIYKVNVD-------KEP----ELARDF-- 101 (141)
T ss_dssp TCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEETT-------TCH----HHHHHT--
T ss_pred hhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc-eEEEEEECC-------CCH----HHHHHc--
Confidence 567888999999999999999999999999999999999999999874 999999876 222 222222
Q ss_pred ceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhccc
Q psy299 130 QFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 130 ~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
++..+|+++++|++|+++ ++.|..+.+.|.+.|+++|+.
T Consensus 102 --------------------------------~v~~~Pt~~~~~~~g~~~-~~~G~~~~~~l~~~l~~~l~k 140 (141)
T 3hxs_A 102 --------------------------------GIQSIPTIWFVPMKGEPQ-VNMGALSKEQLKGYIDKVLLK 140 (141)
T ss_dssp --------------------------------TCCSSSEEEEECSSSCCE-EEESCCCHHHHHHHHHHTTC-
T ss_pred --------------------------------CCCCcCEEEEEeCCCCEE-EEeCCCCHHHHHHHHHHHHcc
Confidence 344568999999999988 677778888899999998865
No 109
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.63 E-value=3.8e-16 Score=122.31 Aligned_cols=123 Identities=11% Similarity=0.047 Sum_probs=87.5
Q ss_pred cCCcccCCeEeecCCCCcccCCCCCCcEEEEEEe-cCCCCCcHHHHHHH---HHHHHHHhhcCcEEEEeecCCCCCCCCC
Q psy299 40 KNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNV-ASRCGYTGKHYKEL---VELDEKFRDRGLRILAFPCNQFGGQEPG 115 (240)
Q Consensus 40 ~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~-atwCp~C~~~~~~L---~~l~~~~~~~~v~vi~Vs~D~~~~~~~~ 115 (240)
..+...+++ +..|+.+.+++.+||++||+|| ++||++|+.+.|.| .++.+.+.. ++.++.|..+..
T Consensus 25 ~~~~~~~~~---~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~-~~~~v~vd~~~~------ 94 (154)
T 2ju5_A 25 PIAAANLQW---ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV-HLHMVEVDFPQK------ 94 (154)
T ss_dssp SSCCCCCCE---ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEECCSS------
T ss_pred hcccCCCCC---CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC-cEEEEEecCccc------
Confidence 455555666 3457778888889999999999 99999999999999 777665544 588888887621
Q ss_pred CHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCC--CccchHH
Q psy299 116 DADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANA--SPASLIP 193 (240)
Q Consensus 116 ~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~--~~~~l~~ 193 (240)
. ++++++. + ....+.+.+ ++..+|+++++|++|+++.+. |.. +.+.+.+
T Consensus 95 -~----------~~~~~~~---~----~~~~l~~~~----------~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~ 145 (154)
T 2ju5_A 95 -N----------HQPEEQR---Q----KNQELKAQY----------KVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVS 145 (154)
T ss_dssp -C----------CCCHHHH---H----HHHHHHHHT----------TCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHH
T ss_pred -c----------CCChhhH---h----hHHHHHHHc----------CCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHH
Confidence 1 1222211 0 001122221 466679999999999999988 777 6777999
Q ss_pred HHHHhccc
Q psy299 194 HIEILGRT 201 (240)
Q Consensus 194 ~L~~ll~~ 201 (240)
.|+++++.
T Consensus 146 ~l~~~l~~ 153 (154)
T 2ju5_A 146 KVKSALKL 153 (154)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhc
Confidence 99998865
No 110
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.58 E-value=5.6e-15 Score=111.64 Aligned_cols=108 Identities=18% Similarity=0.182 Sum_probs=81.0
Q ss_pred CCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHH
Q psy299 41 NAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQI 120 (240)
Q Consensus 41 ~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~ 120 (240)
...++|++. +.+++.++....+||++||.||++||++|+.+.|.+.++.+++++ ++.++.|.+|. ..
T Consensus 20 ~~~~~~~~~--~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~-------~~--- 86 (128)
T 3ul3_B 20 MFKKVPRLQ--QNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDK-------NE--- 86 (128)
T ss_dssp ------CCC--CCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGG-------CH---
T ss_pred HhccCCccc--cCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCC-------CH---
Confidence 445677766 556777778888999999999999999999999999999999986 49999998762 22
Q ss_pred HHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHH
Q psy299 121 CEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEI 197 (240)
Q Consensus 121 ~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ 197 (240)
+.++++ ++..+|+++++ ++|+++.++.|..+.++|.+.|++
T Consensus 87 -~l~~~~----------------------------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 87 -SLARKF----------------------------------SVKSLPTIILL-KNKTMLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp -HHHHHT----------------------------------TCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHTT
T ss_pred -HHHHHc----------------------------------CCCCcCEEEEE-ECCEEEEEecCCCCHHHHHHHHHh
Confidence 222222 34455898888 799999999888888777777654
No 111
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.52 E-value=3.6e-14 Score=109.72 Aligned_cols=116 Identities=14% Similarity=0.135 Sum_probs=92.2
Q ss_pred cCCcccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHH
Q psy299 40 KNAETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQ 119 (240)
Q Consensus 40 ~~g~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~ 119 (240)
..|.++++..+.+.++..+...-..++++||.||++||++|+...|.++++.++++++ +.++.|.+| .+.
T Consensus 30 ~~~~~~~~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-~~~~~vd~~-------~~~-- 99 (148)
T 3p2a_A 30 RCGHSLFDGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK-VRFVKVNTE-------AEP-- 99 (148)
T ss_dssp TTCCBTTCCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT-------TCH--
T ss_pred hcCCccccCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc-eEEEEEECc-------CCH--
Confidence 4567788888888888776654467899999999999999999999999999999764 999999876 222
Q ss_pred HHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 120 ICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 120 ~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
++++++ ++..+|+++++ ++|+++.++.|..+.+.|.+.|++++
T Consensus 100 --~l~~~~----------------------------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 142 (148)
T 3p2a_A 100 --ALSTRF----------------------------------RIRSIPTIMLY-RNGKMIDMLNGAVPKAPFDNWLDEQL 142 (148)
T ss_dssp --HHHHHT----------------------------------TCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHHHHH
T ss_pred --HHHHHC----------------------------------CCCccCEEEEE-ECCeEEEEEeCCCCHHHHHHHHHHHh
Confidence 222323 34445887777 69999999999888899999999998
Q ss_pred ccC
Q psy299 200 RTS 202 (240)
Q Consensus 200 ~~~ 202 (240)
+..
T Consensus 143 ~~~ 145 (148)
T 3p2a_A 143 SRD 145 (148)
T ss_dssp HSC
T ss_pred ccc
Confidence 754
No 112
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.51 E-value=2.7e-14 Score=113.18 Aligned_cols=122 Identities=8% Similarity=0.043 Sum_probs=74.8
Q ss_pred ccCCCCCCcEEEEEEecCCCCCcHHHHHHH---HHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeee
Q psy299 58 VPLSTYKGHVLVIVNVASRCGYTGKHYKEL---VELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLF 134 (240)
Q Consensus 58 v~ls~~~gk~vlv~F~atwCp~C~~~~~~L---~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~ 134 (240)
+.++..+||++||+|||+||++|+.+.+.+ .++.+.+++ ++.++.|++|.. . .+.....
T Consensus 40 ~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~-------~----------~~~~~~~ 101 (172)
T 3f9u_A 40 MEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNK-------T----------PLTEPVK 101 (172)
T ss_dssp HHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCC-------C----------EEEEEEE
T ss_pred HHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcc-------c----------ccchhhh
Confidence 444446799999999999999999864333 555666655 599999998721 0 0100000
Q ss_pred EeeecCCCCC--chHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCC-ccchHHHHHHhccc
Q psy299 135 EKINVNGDNA--HPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANAS-PASLIPHIEILGRT 201 (240)
Q Consensus 135 ~~~d~~~~~~--~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~-~~~l~~~L~~ll~~ 201 (240)
....+... ..+....... .....++..+|+++++|++|+++.++.|..+ .+++.+.|+++++.
T Consensus 102 --~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~~ 167 (172)
T 3f9u_A 102 --IMENGTERTLRTVGDKWSYL--QRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLEN 167 (172)
T ss_dssp --EEETTEEEEEEEHHHHHHHH--HHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHHH
T ss_pred --hhhcchhhhhhhhhhhhhHH--HHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHHH
Confidence 00011000 0000000000 0001157778999999999999998888887 88898888888754
No 113
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.49 E-value=1e-13 Score=105.07 Aligned_cols=97 Identities=10% Similarity=0.052 Sum_probs=72.6
Q ss_pred CCCcEEEEEEecCCCCCcHHHHHHHH--HHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecC
Q psy299 63 YKGHVLVIVNVASRCGYTGKHYKELV--ELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVN 140 (240)
Q Consensus 63 ~~gk~vlv~F~atwCp~C~~~~~~L~--~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~ 140 (240)
..||++||+||++||++|+...|.|. ++.+.+++ ++.++.|+++. .+...++++++++.++
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~--------~~~~~~l~~~~~v~~~-------- 89 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGN--------FDRNLELSQAYGDPIQ-------- 89 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTT--------TTSSHHHHHHTTCGGG--------
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCc--------ccchHHHHHHhCCccC--------
Confidence 45899999999999999999999999 99999876 49999998741 1112234444444220
Q ss_pred CCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccC-------CCCccchHHHHHHhc
Q psy299 141 GDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAA-------NASPASLIPHIEILG 199 (240)
Q Consensus 141 ~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~-------~~~~~~l~~~L~~ll 199 (240)
..+|+++++|++|+++.+..+ ..+.+++.+.|+++.
T Consensus 90 -----------------------~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 90 -----------------------DGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp -----------------------GCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred -----------------------CccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 345899999999999998877 455666777777653
No 114
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.47 E-value=2.6e-14 Score=109.09 Aligned_cols=106 Identities=12% Similarity=0.039 Sum_probs=76.9
Q ss_pred eEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhc
Q psy299 48 FTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKK 127 (240)
Q Consensus 48 f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~ 127 (240)
+.+.+.++-...+++.+||++||.||++||++|+...|.++++.+++ ++.++.|.+| ... ++++++
T Consensus 23 ~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~-------~~~----~l~~~~ 88 (133)
T 3cxg_A 23 IELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVD-------IHP----KLNDQH 88 (133)
T ss_dssp EECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETT-------TCH----HHHHHT
T ss_pred EEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEecc-------chH----HHHHhc
Confidence 44555555455567788999999999999999999999999887766 4888888765 111 122222
Q ss_pred CcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEE-cCCCC--eEEeccCCCCccchHHHHHHhcccC
Q psy299 128 NVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIV-DKNGV--PVERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 128 ~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lI-D~~G~--Iv~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
++..+|+++++ |++|+ ++.++.|. +.++|.+.|++++..+
T Consensus 89 ----------------------------------~v~~~Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~~~ 131 (133)
T 3cxg_A 89 ----------------------------------NIKALPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCLEK 131 (133)
T ss_dssp ----------------------------------TCCSSSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSEEC
T ss_pred ----------------------------------CCCCCCEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHHhh
Confidence 34456888888 45665 88888776 7788999999988654
No 115
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.47 E-value=2.4e-13 Score=103.70 Aligned_cols=93 Identities=15% Similarity=0.145 Sum_probs=74.7
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.++++||.||++||++|+...|.|.++.++++++ +.++.|.+|. +. ++++++
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~-------~~----~l~~~~---------------- 88 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ-IVIYKVDTEK-------EQ----ELAGAF---------------- 88 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH----HHHHHT----------------
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-EEEEEEeCCC-------CH----HHHHHc----------------
Confidence 4689999999999999999999999999999864 9999998761 22 222222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCC
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTSA 203 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~ 203 (240)
++..+|+++++|++|+++ .+.+..+.+.|.+.|++++....
T Consensus 89 ------------------~v~~~Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~~~~~~ 129 (136)
T 2l5l_A 89 ------------------GIRSIPSILFIPMEGKPE-MAQGAMPKASFKKAIDEFLLKKE 129 (136)
T ss_dssp ------------------TCCSSCEEEEECSSSCCE-EEESCCCHHHHHHHHHHHHTSCT
T ss_pred ------------------CCCCCCEEEEECCCCcEE-EEeCCCCHHHHHHHHHHHhhccC
Confidence 344558999999999988 56777788889999999987653
No 116
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.46 E-value=3.6e-13 Score=99.99 Aligned_cols=105 Identities=14% Similarity=0.039 Sum_probs=79.1
Q ss_pred eecCCCCcccCC-CCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhh----cCcEEEEeecCCCCCCCCCCHHHHHHHH
Q psy299 50 VKNIKGEDVPLS-TYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRD----RGLRILAFPCNQFGGQEPGDADQICEFT 124 (240)
Q Consensus 50 l~d~~G~~v~ls-~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~----~~v~vi~Vs~D~~~~~~~~~~e~~~~~~ 124 (240)
+.+++++.+... ..+++++||.||++||++|+...|.+.++.+++++ .++.++.|.++.
T Consensus 9 v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~---------------- 72 (121)
T 2djj_A 9 VTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATA---------------- 72 (121)
T ss_dssp SEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTT----------------
T ss_pred eEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcc----------------
Confidence 445566555443 24789999999999999999999999999999986 258888887651
Q ss_pred HhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCe-EEeccCCCCccchHHHHHHhcccC
Q psy299 125 KKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVP-VERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 125 ~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~I-v~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
.++. . ++..+|++++++++|++ +.++.+..+.+.|.+.|++++..+
T Consensus 73 ------~~~~-------------------------~-~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~~ 119 (121)
T 2djj_A 73 ------NDVP-------------------------D-EIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKYK 119 (121)
T ss_dssp ------SCCS-------------------------S-CCSSSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSSC
T ss_pred ------cccc-------------------------c-ccCcCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCcC
Confidence 0100 0 24456899999998885 667777778888999999887653
No 117
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.46 E-value=1.5e-13 Score=102.08 Aligned_cols=89 Identities=18% Similarity=0.169 Sum_probs=70.4
Q ss_pred CCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCC
Q psy299 62 TYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNG 141 (240)
Q Consensus 62 ~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~ 141 (240)
+.+|+++||.||++||++|+...|.+.++.+++++ +.++.|.+|. .. ++++++
T Consensus 28 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~-------~~----~l~~~~-------------- 80 (116)
T 3qfa_C 28 AAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDD-------CQ----DVASEC-------------- 80 (116)
T ss_dssp HHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTT-------TH----HHHHHT--------------
T ss_pred hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCC-------CH----HHHHHc--------------
Confidence 34789999999999999999999999999998875 8999998761 22 222323
Q ss_pred CCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 142 DNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 142 ~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
++..+|+++++ ++|+++.++.+. +.+.|.+.|+++|
T Consensus 81 --------------------~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 81 --------------------EVKSMPTFQFF-KKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp --------------------TCCSSSEEEEE-SSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred --------------------CCccccEEEEE-eCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 34445887777 899999998887 8888999988765
No 118
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.45 E-value=8.3e-14 Score=104.93 Aligned_cols=103 Identities=14% Similarity=0.186 Sum_probs=77.6
Q ss_pred cccCCCCCCcEEEEEEecCCCCCcHHHHHHH---HHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceee
Q psy299 57 DVPLSTYKGHVLVIVNVASRCGYTGKHYKEL---VELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDL 133 (240)
Q Consensus 57 ~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L---~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~ 133 (240)
.+.+++.+||++||.||++||++|+.+.|.+ ..+.+.++. ++.++.|.+|. +...++++++
T Consensus 19 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~---------~~~~~~~~~~------ 82 (130)
T 2kuc_A 19 ALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR-HFVNLKMDMEK---------GEGVELRKKY------ 82 (130)
T ss_dssp HHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH-HSEEEEECSSS---------TTHHHHHHHT------
T ss_pred HHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc-CeEEEEEecCC---------cchHHHHHHc------
Confidence 3455556799999999999999999999999 666666654 47788876541 1112223333
Q ss_pred eEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCC
Q psy299 134 FEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTSA 203 (240)
Q Consensus 134 ~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~ 203 (240)
++..+|+++++|++|+++.++.|..+.++|.+.|++++....
T Consensus 83 ----------------------------~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~~~ 124 (130)
T 2kuc_A 83 ----------------------------GVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVESEG 124 (130)
T ss_dssp ----------------------------TCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSCCC
T ss_pred ----------------------------CCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHhcc
Confidence 344558999999999999999888888889999999987753
No 119
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.45 E-value=2.8e-13 Score=99.76 Aligned_cols=93 Identities=20% Similarity=0.182 Sum_probs=75.7
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
+|+++||.||++||++|+...|.+.++.+++++ ++.++.|++|. +. ++++++
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~-------~~----~l~~~~---------------- 67 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDE-------NQ----ETAGKY---------------- 67 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTT-------CC----SHHHHT----------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCC-------CH----HHHHHc----------------
Confidence 789999999999999999999999999999986 59999998762 11 111111
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCC
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTSA 203 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~ 203 (240)
++..+|+++++ ++|+++.++.|..+.++|.+.|++++..+.
T Consensus 68 ------------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~~~~~~ 108 (112)
T 2voc_A 68 ------------------GVMSIPTLLVL-KDGEVVETSVGFKPKEALQELVNKHLLEHH 108 (112)
T ss_dssp ------------------TCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTSCSCC
T ss_pred ------------------CCCcccEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHHHhhc
Confidence 35556898999 999999999988888889999998886653
No 120
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.45 E-value=5.4e-13 Score=96.80 Aligned_cols=90 Identities=14% Similarity=0.201 Sum_probs=71.4
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.|++++|.||++||++|+...|.++++.++++++ +.++.|++| .+.+ +++++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~-------~~~~----~~~~~---------------- 69 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK-LKCVKLNTD-------ESPN----VASEY---------------- 69 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT-------TCHH----HHHHH----------------
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc-eEEEEEECC-------CCHH----HHHHC----------------
Confidence 4899999999999999999999999999999864 999999876 1221 22222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
++..+|+++++ ++|+++.++.|..+.++|.+.|+++++
T Consensus 70 ------------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 107 (107)
T 1dby_A 70 ------------------GIRSIPTIMVF-KGGKKCETIIGAVPKATIVQTVEKYLN 107 (107)
T ss_dssp ------------------TCCSSCEEEEE-SSSSEEEEEESCCCHHHHHHHHHHHCC
T ss_pred ------------------CCCcCCEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 34445886666 899999999888888889999988874
No 121
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.45 E-value=6.1e-14 Score=103.06 Aligned_cols=88 Identities=18% Similarity=0.220 Sum_probs=65.8
Q ss_pred CCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecC
Q psy299 61 STYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVN 140 (240)
Q Consensus 61 s~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~ 140 (240)
++..+|++||+|||+||++|+...|.+.++.+.++ ++.++.|.+| ..+ +.++++
T Consensus 16 ~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~d-------~~~----~l~~~~------------- 69 (105)
T 3zzx_A 16 NEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS--DVVFLKVDVD-------ECE----DIAQDN------------- 69 (105)
T ss_dssp HHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TEEEEEEETT-------TCH----HHHHHT-------------
T ss_pred HhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC--CeEEEEEecc-------cCH----HHHHHc-------------
Confidence 34468999999999999999999999999999886 4788888766 222 233333
Q ss_pred CCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHH
Q psy299 141 GDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEI 197 (240)
Q Consensus 141 ~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ 197 (240)
+|..+|+++++ ++|+++.++.|. ++++|.+.|++
T Consensus 70 ---------------------~V~~~PT~~~~-~~G~~v~~~~G~-~~~~l~~~i~k 103 (105)
T 3zzx_A 70 ---------------------QIACMPTFLFM-KNGQKLDSLSGA-NYDKLLELVEK 103 (105)
T ss_dssp ---------------------TCCBSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHH
T ss_pred ---------------------CCCeecEEEEE-ECCEEEEEEeCc-CHHHHHHHHHh
Confidence 34445776555 899999998874 66667777665
No 122
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.44 E-value=4.1e-13 Score=97.57 Aligned_cols=90 Identities=17% Similarity=0.175 Sum_probs=72.1
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.|++++|.||++||++|+...|.++++.++++++ +.++.|.+|. +++ +++++
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~~----~~~~~---------------- 70 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NPG----TAPKY---------------- 70 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTT-------CTT----HHHHT----------------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-cEEEEEECCC-------CHH----HHHHc----------------
Confidence 5799999999999999999999999999999864 8999998762 111 11111
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
++..+|+++++ ++|+++.++.|..+.++|.+.|+++++
T Consensus 71 ------------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 108 (108)
T 2trx_A 71 ------------------GIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 108 (108)
T ss_dssp ------------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred ------------------CCcccCEEEEE-eCCEEEEEEecCCCHHHHHHHHHHhhC
Confidence 35556898888 899999998888888889999988763
No 123
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.44 E-value=1.4e-12 Score=98.09 Aligned_cols=93 Identities=12% Similarity=0.090 Sum_probs=73.6
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.++++||.||++||++|+...|.+.++.+++++. +.++.|.+|. .. ++++++
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~-------~~----~l~~~~---------------- 85 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV-VKVGAVNADK-------HQ----SLGGQY---------------- 85 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT-SEEEEEETTT-------CH----HHHHHH----------------
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc-eEEEEEeCCC-------CH----HHHHHc----------------
Confidence 4789999999999999999999999999999874 8898888761 21 122222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccC
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
++..+|++++++++|+++.++.+..+.++|.+.|.+.++..
T Consensus 86 ------------------~v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~~~ 126 (130)
T 2dml_A 86 ------------------GVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALRSG 126 (130)
T ss_dssp ------------------TCCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHHHS
T ss_pred ------------------CCCccCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHhcC
Confidence 34556899999999987788888788888999888877543
No 124
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.43 E-value=4.3e-13 Score=98.45 Aligned_cols=87 Identities=15% Similarity=0.227 Sum_probs=68.1
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
+||++||.||++||++|+...|.++++.+++++ +.++.|.+| ... ++++++
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~--~~~~~vd~~-------~~~----~l~~~~---------------- 73 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ--ADFYKLDVD-------ELG----DVAQKN---------------- 73 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETT-------TCH----HHHHHT----------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEECC-------CCH----HHHHHc----------------
Confidence 489999999999999999999999999999864 888888776 122 122222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
++..+|++++++ +|+++.++.|. .+++|.+.|++++
T Consensus 74 ------------------~v~~~Pt~~~~~-~G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 74 ------------------EVSAMPTLLLFK-NGKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp ------------------TCCSSSEEEEEE-TTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred ------------------CCCccCEEEEEE-CCEEEEEEeCC-CHHHHHHHHHhhC
Confidence 344558888887 99999988876 6677888888764
No 125
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.43 E-value=4.4e-13 Score=96.85 Aligned_cols=89 Identities=17% Similarity=0.190 Sum_probs=71.6
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
++++++|.||++||++|+...|.+.++.++++++ +.++.|.+| .+++ .++++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~-------~~~~----~~~~~---------------- 69 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVD-------ENPS----TAAKY---------------- 69 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT-------TCHH----HHHHT----------------
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECC-------cCHH----HHHhC----------------
Confidence 7899999999999999999999999999999875 999999876 2222 22222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
++..+|++++++ +|+++.++.|..+.++|.+.|+++|
T Consensus 70 ------------------~v~~~Pt~~~~~-~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 70 ------------------EVMSIPTLIVFK-DGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp ------------------TCCSBSEEEEEE-TTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred ------------------CCcccCEEEEEe-CCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 344458878884 9999999988888888888888764
No 126
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.43 E-value=5.4e-13 Score=96.74 Aligned_cols=90 Identities=12% Similarity=0.110 Sum_probs=72.9
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
+|++++|.||++||++|+...|.+.++.+++++ ++.++.|.+| ..++ +++++
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~-------~~~~----~~~~~---------------- 71 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVD-------ENQK----IADKY---------------- 71 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETT-------TCHH----HHHHT----------------
T ss_pred cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccc-------cCHH----HHHhc----------------
Confidence 489999999999999999999999999999987 4899999876 2222 22222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
++..+|+++++ ++|+++.++.|..+.++|.+.|+++++
T Consensus 72 ------------------~i~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 109 (109)
T 3tco_A 72 ------------------SVLNIPTTLIF-VNGQLVDSLVGAVDEDTLESTVNKYLK 109 (109)
T ss_dssp ------------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHC-
T ss_pred ------------------CcccCCEEEEE-cCCcEEEeeeccCCHHHHHHHHHHHhC
Confidence 34445888888 999999999888888889999998864
No 127
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.43 E-value=7.7e-13 Score=96.97 Aligned_cols=91 Identities=14% Similarity=0.145 Sum_probs=73.8
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.|+++||.||++|||+|+...|.+.++.++++++ +.++.|.+|. +. +.++++
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~-------~~----~~~~~~---------------- 75 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDP-------NP----TTVKKY---------------- 75 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTT-------CH----HHHHHT----------------
T ss_pred CCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcCC-------CH----HHHHHc----------------
Confidence 6899999999999999999999999999999875 9999998762 22 122222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhccc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
++..+|+++++ ++|+++.++.|..+.+.|.+.|+++++.
T Consensus 76 ------------------~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 76 ------------------KVEGVPALRLV-KGEQILDSTEGVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp ------------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred ------------------CCCceeEEEEE-cCCEEEEEecCCCCHHHHHHHHHHHhcC
Confidence 34455888888 9999999888888888899999998764
No 128
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.43 E-value=2.6e-13 Score=98.13 Aligned_cols=89 Identities=17% Similarity=0.164 Sum_probs=70.8
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.|++++|.||++||++|+...|.++++.++++++ +.++.|++| .+.+ .++++
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~-------~~~~----~~~~~---------------- 67 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK-VTVAKLNVD-------ENPE----TTSQF---------------- 67 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT-CEEEEEETT-------TCHH----HHHHT----------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-cEEEEEECc-------CCHH----HHHHc----------------
Confidence 5789999999999999999999999999998864 999999876 1221 22222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
++..+|+++++ ++|+++.++.|..+.+.|.+.|+++|
T Consensus 68 ------------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 68 ------------------GIMSIPTLILF-KGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp ------------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred ------------------CCccccEEEEE-eCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 34455888888 89999998888888777888887765
No 129
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.43 E-value=3.9e-13 Score=98.43 Aligned_cols=90 Identities=12% Similarity=0.159 Sum_probs=71.5
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.|++++|.||++||++|+...|.+.++.++++++ +.++.|++| .+.+ .++++
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~-------~~~~----~~~~~---------------- 73 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK-IEIVKLNID-------ENPG----TAAKY---------------- 73 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT-------TCHH----HHHHT----------------
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC-eEEEEEEcC-------CCHH----HHHhC----------------
Confidence 4799999999999999999999999999999764 999999876 2221 22222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
++..+|+++++ ++|+++.++.|..+.+.|.+.|+++|+
T Consensus 74 ------------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 74 ------------------GVMSIPTLNVY-QGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp ------------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred ------------------CCCcccEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 34445776655 899999999888888889999988875
No 130
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.43 E-value=6.2e-13 Score=97.41 Aligned_cols=92 Identities=18% Similarity=0.240 Sum_probs=69.2
Q ss_pred CCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeec
Q psy299 60 LSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINV 139 (240)
Q Consensus 60 ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~ 139 (240)
+.+.+|+++||.||++||++|+...|.++++.++++ ++.++.|.+|. .+. +.++++
T Consensus 19 ~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~------~~~----~~~~~~------------ 74 (111)
T 2pu9_C 19 VKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCNQ------ENK----TLAKEL------------ 74 (111)
T ss_dssp HTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS------TTH----HHHHHH------------
T ss_pred HHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC--CeEEEEEecCc------chH----HHHHHc------------
Confidence 344578999999999999999999999999999987 48898887651 111 122222
Q ss_pred CCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 140 NGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 140 ~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
++..+|+ ++++++|+++.++.|. ..++|.+.|++++
T Consensus 75 ----------------------~v~~~Pt-~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 75 ----------------------GIRVVPT-FKILKENSVVGEVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp ----------------------CCSBSSE-EEEESSSSEEEEEESS-CHHHHHHHHHHHH
T ss_pred ----------------------CCCeeeE-EEEEeCCcEEEEEcCC-CHHHHHHHHHHhh
Confidence 3445587 6778999999888776 4677888887765
No 131
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.42 E-value=2.5e-13 Score=108.08 Aligned_cols=92 Identities=8% Similarity=-0.022 Sum_probs=65.8
Q ss_pred cCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeee
Q psy299 59 PLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKIN 138 (240)
Q Consensus 59 ~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d 138 (240)
.+++++|+++||+|||+|||+|+.++|.|.+++++++ ++.++.|+.| ...+.+.++.-
T Consensus 48 ~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d-----------~~~~~~~~~~~--------- 105 (167)
T 1z6n_A 48 RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKG-----------RAEDDLRQRLA--------- 105 (167)
T ss_dssp HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHH-----------HHHHHTTTTTT---------
T ss_pred HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECC-----------CCHHHHHHHHH---------
Confidence 4567789999999999999999999999999998875 5888888654 22222222220
Q ss_pred cCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHH
Q psy299 139 VNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIE 196 (240)
Q Consensus 139 ~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~ 196 (240)
.++..+|+++++|++|+++.++.+ .+..+.+.+.
T Consensus 106 ----------------------~~v~~iPt~i~~~~~G~~~~~~g~--~p~~~~~~i~ 139 (167)
T 1z6n_A 106 ----------------------LERIAIPLVLVLDEEFNLLGRFVE--RPQAVLDGGP 139 (167)
T ss_dssp ----------------------CSSCCSSEEEEECTTCCEEEEEES--SCHHHHHHCH
T ss_pred ----------------------cCCCCcCeEEEECCCCCEEEEEcC--CCHHHHHhHH
Confidence 034556999999999999888743 3334444333
No 132
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.42 E-value=7.1e-13 Score=97.16 Aligned_cols=91 Identities=10% Similarity=0.113 Sum_probs=68.1
Q ss_pred CCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCC
Q psy299 63 YKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGD 142 (240)
Q Consensus 63 ~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~ 142 (240)
.+|++++|.||++||++|+...|.+.++.++++..++.++.|.+|. +. ++++++
T Consensus 19 ~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------~~----~~~~~~--------------- 72 (112)
T 3d6i_A 19 AGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE-------NS----EISELF--------------- 72 (112)
T ss_dssp TTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTT-------CH----HHHHHT---------------
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEeccc-------CH----HHHHHc---------------
Confidence 4589999999999999999999999999999766679999998761 22 122222
Q ss_pred CCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcc
Q psy299 143 NAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 143 ~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
++..+|+++++ ++|+++.++.|. .+++|.+.|+++++
T Consensus 73 -------------------~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 73 -------------------EISAVPYFIII-HKGTILKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp -------------------TCCSSSEEEEE-ETTEEEEEECSC-CHHHHHHHHHHHHH
T ss_pred -------------------CCCcccEEEEE-ECCEEEEEecCC-CHHHHHHHHHHHHh
Confidence 34455887777 799999988876 44568888888775
No 133
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.42 E-value=1.6e-13 Score=106.93 Aligned_cols=91 Identities=16% Similarity=0.093 Sum_probs=71.2
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.++++||+||++||++|+.+.|.|.++.++++++ +.++.|.+|. .+ ++++++
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~-------~~----~l~~~~---------------- 73 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQ-------TA----VYTQYF---------------- 73 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTT-------CC----HHHHHT----------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCc-------CH----HHHHHc----------------
Confidence 5899999999999999999999999999998865 8888898762 11 122222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeE---------EeccC-CCCccchHHHHHHhccc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPV---------ERHAA-NASPASLIPHIEILGRT 201 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv---------~~~~~-~~~~~~l~~~L~~ll~~ 201 (240)
++..+|+++ ++++|+++ .++.+ ..+.++|.+.|+.++++
T Consensus 74 ------------------~v~~~Pt~~-~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~~ 122 (149)
T 3gix_A 74 ------------------DISYIPSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRG 122 (149)
T ss_dssp ------------------TCCSSSEEE-EEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHHH
T ss_pred ------------------CCCccCeEE-EEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHHH
Confidence 344558877 77899999 77777 67778899999888754
No 134
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.41 E-value=1.2e-12 Score=98.81 Aligned_cols=109 Identities=15% Similarity=0.145 Sum_probs=77.0
Q ss_pred EeecCCCCcccCCCC-CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhc-CcEEEEeecCCCCCCCCCCHHHHHHHHHh
Q psy299 49 TVKNIKGEDVPLSTY-KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDR-GLRILAFPCNQFGGQEPGDADQICEFTKK 126 (240)
Q Consensus 49 ~l~d~~G~~v~ls~~-~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~-~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~ 126 (240)
.+.++++..+...-. .++++||.||++||++|+...|.|.++.+++++. ++.++.|.++. .
T Consensus 8 ~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~-------~---------- 70 (133)
T 2dj3_A 8 PVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATA-------N---------- 70 (133)
T ss_dssp SSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTT-------S----------
T ss_pred ceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCc-------C----------
Confidence 344555555443333 4899999999999999999999999999999863 58888776541 0
Q ss_pred cCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEE-ecc-CCCCccchHHHHHHhcccC
Q psy299 127 KNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVE-RHA-ANASPASLIPHIEILGRTS 202 (240)
Q Consensus 127 ~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~-~~~-~~~~~~~l~~~L~~ll~~~ 202 (240)
+.+ .. ..++..+|++++++++|++.. .+. +..+.+.|.+.|++++...
T Consensus 71 -----~~~---------~~--------------~~~v~~~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 71 -----DIT---------ND--------------QYKVEGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp -----CCC---------CS--------------SCCCSSSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSC
T ss_pred -----HHH---------Hh--------------hcCCCcCCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhcccc
Confidence 111 00 015667799999988876543 344 4467788999999988653
No 135
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.41 E-value=4.3e-13 Score=97.52 Aligned_cols=88 Identities=13% Similarity=0.177 Sum_probs=68.7
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.+++++|.||++||++|+...|.++++.++++ ++.++.|.+|. +++ .++++
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~-------~~~----l~~~~---------------- 67 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQD-------MQE----IAGRY---------------- 67 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECC-------C---------------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCC-------CHH----HHHhc----------------
Confidence 57999999999999999999999999999984 58999998762 111 11111
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
++..+|+++++ ++|+++.++.|..+.++|.+.|++++
T Consensus 68 ------------------~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 68 ------------------AVFTGPTVLLF-YNGKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp --------------------CCCCEEEEE-ETTEEEEEEESSCCHHHHHHHHHTTC
T ss_pred ------------------CCCCCCEEEEE-eCCeEEEEEeCCcCHHHHHHHHHHhh
Confidence 45556898888 59999999988888888999998876
No 136
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.41 E-value=1.3e-13 Score=102.66 Aligned_cols=113 Identities=15% Similarity=0.155 Sum_probs=78.5
Q ss_pred cCCcccCCeEeecCCCCcccCCC--CCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCH
Q psy299 40 KNAETVYDFTVKNIKGEDVPLST--YKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDA 117 (240)
Q Consensus 40 ~~g~~~p~f~l~d~~G~~v~ls~--~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~ 117 (240)
..|...+.+.+.+.++-.-.+.+ -.|+++||.||++||++|+...|.|+++.+++++ +.++.|.+| ++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~-------~~~ 77 (122)
T 2vlu_A 7 AAAVAAEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVD-------ELK 77 (122)
T ss_dssp -----CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETT-------TCH
T ss_pred ccCCCCcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECC-------CCH
Confidence 35556666666554432222332 2589999999999999999999999999998875 899999876 122
Q ss_pred HHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHH
Q psy299 118 DQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEI 197 (240)
Q Consensus 118 e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ 197 (240)
++++++ ++..+|+++++ ++|+++.++.|.. .++|.+.|++
T Consensus 78 ----~~~~~~----------------------------------~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~ 117 (122)
T 2vlu_A 78 ----PIAEQF----------------------------------SVEAMPTFLFM-KEGDVKDRVVGAI-KEELTAKVGL 117 (122)
T ss_dssp ----HHHHHT----------------------------------TCCSSSEEEEE-ETTEEEEEEESSC-HHHHHHHHHH
T ss_pred ----HHHHHc----------------------------------CCCcccEEEEE-eCCEEEEEEeCcC-HHHHHHHHHH
Confidence 122222 34445775555 8999999888877 7889999998
Q ss_pred hccc
Q psy299 198 LGRT 201 (240)
Q Consensus 198 ll~~ 201 (240)
+++.
T Consensus 118 ~l~~ 121 (122)
T 2vlu_A 118 HAAA 121 (122)
T ss_dssp HHSC
T ss_pred Hhcc
Confidence 8764
No 137
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.41 E-value=7.6e-13 Score=98.54 Aligned_cols=89 Identities=15% Similarity=0.105 Sum_probs=71.6
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.|+++||.||++||++|+...|.|+++.+++++ ++.++.|.+|. +. ++++++
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~-------~~----~l~~~~---------------- 81 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDD-------HT----DLAIEY---------------- 81 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTT-------TH----HHHHHT----------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCC-------CH----HHHHHc----------------
Confidence 578999999999999999999999999999876 49999998761 22 222222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
++..+|+++++ ++|+++.++.+..+.+.|.+.|++++
T Consensus 82 ------------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 82 ------------------EVSAVPTVLAM-KNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp ------------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred ------------------CCCcccEEEEE-eCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 34445888888 89999998888878888999998876
No 138
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.41 E-value=9.7e-13 Score=96.19 Aligned_cols=88 Identities=16% Similarity=0.133 Sum_probs=69.3
Q ss_pred CcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCCC
Q psy299 65 GHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDNA 144 (240)
Q Consensus 65 gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~ 144 (240)
|+++||.||++||++|+...|.|+++.+++++ ++.++.|.+| .+. ++++++
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~-------~~~----~~~~~~----------------- 74 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVD-------AVA----AVAEAA----------------- 74 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETT-------TTH----HHHHHH-----------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECC-------chH----HHHHHc-----------------
Confidence 89999999999999999999999999999986 5999999876 122 122222
Q ss_pred chHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcc
Q psy299 145 HPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 145 ~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
++..+|++++ .++|+++.++.|. +.++|.+.|+++++
T Consensus 75 -----------------~v~~~Pt~~~-~~~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 75 -----------------GITAMPTFHV-YKDGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp -----------------TCCBSSEEEE-EETTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred -----------------CCCcccEEEE-EECCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 3444577554 4899999988887 78889999998875
No 139
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.40 E-value=8.2e-13 Score=99.39 Aligned_cols=108 Identities=16% Similarity=0.089 Sum_probs=76.2
Q ss_pred ccCCeEeecCCCCcccCCC--CCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHH
Q psy299 44 TVYDFTVKNIKGEDVPLST--YKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQIC 121 (240)
Q Consensus 44 ~~p~f~l~d~~G~~v~ls~--~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~ 121 (240)
..+-+.+.+.++-.-.+++ .+|+++||.||++||++|+...|.|+++.++++ ++.++.|.+| .+.
T Consensus 15 ~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d-------~~~---- 81 (124)
T 1xfl_A 15 EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTD-------ELK---- 81 (124)
T ss_dssp CSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETT-------TSH----
T ss_pred CCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECc-------cCH----
Confidence 3334555444433222322 368999999999999999999999999999986 5899999876 122
Q ss_pred HHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcc
Q psy299 122 EFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 122 ~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
++++++ ++..+|+++++ ++|+++.++.+ .++++|.+.|+++++
T Consensus 82 ~l~~~~----------------------------------~v~~~Pt~~~~-~~G~~~~~~~G-~~~~~l~~~l~~~l~ 124 (124)
T 1xfl_A 82 SVASDW----------------------------------AIQAMPTFMFL-KEGKILDKVVG-AKKDELQSTIAKHLA 124 (124)
T ss_dssp HHHHHT----------------------------------TCCSSSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHHCC
T ss_pred HHHHHc----------------------------------CCCccCEEEEE-ECCEEEEEEeC-CCHHHHHHHHHHhcC
Confidence 222222 34445776555 89999998877 477788888888763
No 140
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.40 E-value=1.6e-14 Score=114.35 Aligned_cols=113 Identities=9% Similarity=0.063 Sum_probs=77.7
Q ss_pred cCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHH
Q psy299 45 VYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFT 124 (240)
Q Consensus 45 ~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~ 124 (240)
.+++...+.+ +.+.....+||++||+||++||++|+.+.|.|.++.+.++. ++.++.|++|. +.+.
T Consensus 27 ~~~i~w~~~~-~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~-------~~~~----- 92 (164)
T 1sen_A 27 GDHIHWRTLE-DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISEL-SHNFVMVNLED-------EEEP----- 92 (164)
T ss_dssp CTTSCBCCHH-HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEG-------GGSC-----
T ss_pred cccccccCHH-HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecC-------CchH-----
Confidence 3445555554 44555567899999999999999999999999998776654 46777777651 0000
Q ss_pred HhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCC----------CCccchHHH
Q psy299 125 KKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAAN----------ASPASLIPH 194 (240)
Q Consensus 125 ~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~----------~~~~~l~~~ 194 (240)
. .. .+. ..+..+|+++++|++|+++.+..+. .+.++|.+.
T Consensus 93 ---------~---------~~-~~~-----------~~~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~ 142 (164)
T 1sen_A 93 ---------K---------DE-DFS-----------PDGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQG 142 (164)
T ss_dssp ---------S---------CG-GGC-----------TTCSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHH
T ss_pred ---------H---------HH-Hhc-----------ccCCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHH
Confidence 0 00 000 0224469999999999999877664 566778888
Q ss_pred HHHhccc
Q psy299 195 IEILGRT 201 (240)
Q Consensus 195 L~~ll~~ 201 (240)
|++++..
T Consensus 143 l~~~l~~ 149 (164)
T 1sen_A 143 MKEAQER 149 (164)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8887754
No 141
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.40 E-value=8.9e-13 Score=99.80 Aligned_cols=90 Identities=17% Similarity=0.172 Sum_probs=72.6
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.++++||.||++||++|+...|.++++.++++++ +.++.|.+|. +. ..
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~~~-------~~------------------------~l 86 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP------------------------GT 86 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTT-EEEEEEETTT-------CC------------------------TT
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEECCC-------CH------------------------HH
Confidence 5899999999999999999999999999999864 9999998762 10 00
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
.. . .++..+|+++++ ++|+++.++.|..+.++|.+.|+++|+
T Consensus 87 ~~-~-------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 87 AP-K-------------YGIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 128 (128)
T ss_dssp SG-G-------------GTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred HH-H-------------cCCCccCEEEEE-eCCEEEEEEcCCCCHHHHHHHHHHhhC
Confidence 00 0 146667999999 999999998888888889999988764
No 142
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=9.1e-13 Score=99.29 Aligned_cols=93 Identities=14% Similarity=0.092 Sum_probs=73.7
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhh---cCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRD---RGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVN 140 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~---~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~ 140 (240)
.++++||.||++||++|+...|.+.++.+++++ .++.++.|.+|. +. +
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------~~----~------------------ 74 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV-------NQ----V------------------ 74 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT-------CC----H------------------
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC-------CH----H------------------
Confidence 478999999999999999999999999999983 358888887661 11 1
Q ss_pred CCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccC
Q psy299 141 GDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 141 ~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
+...+ ++..+|+++++++ |+++.++.+..+.+.|.+.|++++...
T Consensus 75 ------l~~~~----------~v~~~Pt~~~~~~-g~~~~~~~G~~~~~~l~~~l~~~~~~~ 119 (133)
T 1x5d_A 75 ------LASRY----------GIRGFPTIKIFQK-GESPVDYDGGRTRSDIVSRALDLFSDN 119 (133)
T ss_dssp ------HHHHH----------TCCSSSEEEEEET-TEEEEEECSCCSHHHHHHHHHHHHHHH
T ss_pred ------HHHhC----------CCCeeCeEEEEeC-CCceEEecCCCCHHHHHHHHHHHhhcc
Confidence 11111 4555689999987 888888888888888999999988653
No 143
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.40 E-value=8.6e-13 Score=98.60 Aligned_cols=90 Identities=16% Similarity=0.170 Sum_probs=71.3
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.|+++||.||++||++|+...|.++++.++++++++.++.|++|. ..+ +++++
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~-------~~~----~~~~~---------------- 84 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDE-------QSQ----IAQEV---------------- 84 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTT-------CHH----HHHHH----------------
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcC-------CHH----HHHHc----------------
Confidence 589999999999999999999999999999987779999998761 221 22222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
++..+|+++++ ++|+++.++.+. +.++|.+.|+++++
T Consensus 85 ------------------~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l~ 121 (121)
T 2j23_A 85 ------------------GIRAMPTFVFF-KNGQKIDTVVGA-DPSKLQAAITQHSA 121 (121)
T ss_dssp ------------------TCCSSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHHTC
T ss_pred ------------------CCCcccEEEEE-ECCeEEeeEcCC-CHHHHHHHHHHhhC
Confidence 34445887777 699999988877 77889999988764
No 144
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.39 E-value=3.7e-13 Score=105.43 Aligned_cols=92 Identities=11% Similarity=0.121 Sum_probs=73.7
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.++++||+||++||++|+...|.++++.++++++ +.++.|.+|. ++ ++++++
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~~~-------~~----~l~~~~---------------- 114 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ-VRLAKIDTQA-------HP----AVAGRH---------------- 114 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETTT-------ST----HHHHHT----------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC-EEEEEEeCCc-------cH----HHHHHc----------------
Confidence 5899999999999999999999999999999874 9999998762 11 122222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccC
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
++..+|+++++ ++|+++.++.|..+.++|.+.|+++++.+
T Consensus 115 ------------------~i~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 154 (155)
T 2ppt_A 115 ------------------RIQGIPAFILF-HKGRELARAAGARPASELVGFVRGKLGAR 154 (155)
T ss_dssp ------------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC--
T ss_pred ------------------CCCcCCEEEEE-eCCeEEEEecCCCCHHHHHHHHHHHhccC
Confidence 34556888888 79999999988888888999999988753
No 145
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.39 E-value=1.3e-12 Score=94.14 Aligned_cols=102 Identities=14% Similarity=0.118 Sum_probs=74.8
Q ss_pred ecCCCCcccCC-CCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCc
Q psy299 51 KNIKGEDVPLS-TYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNV 129 (240)
Q Consensus 51 ~d~~G~~v~ls-~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~ 129 (240)
.+.++..+... .-.+++++|.||++||++|+...|.++++.++++++ +.++.|++| .++ ++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~-------~~~----~~~~~~-- 68 (105)
T 1fb6_A 3 QDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK-IAVYKLNTD-------EAP----GIATQY-- 68 (105)
T ss_dssp EECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT-------TCH----HHHHHT--
T ss_pred eechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc-eEEEEEcCc-------chH----HHHHhC--
Confidence 34444444321 124789999999999999999999999999998874 899999876 122 222222
Q ss_pred ceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 130 QFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 130 ~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
++..+|+++++ ++|+++.++.|..+.+.+.+.|+++|
T Consensus 69 --------------------------------~v~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 69 --------------------------------NIRSIPTVLFF-KNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp --------------------------------TCCSSSEEEEE-ETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred --------------------------------CCCcccEEEEE-eCCeEEEEEecCCCHHHHHHHHHhhC
Confidence 23445776555 79999998888888888999888765
No 146
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.39 E-value=1.6e-12 Score=93.22 Aligned_cols=89 Identities=15% Similarity=0.138 Sum_probs=71.8
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
+|++++|.||++|||+|+...|.++++.+++++ +.++.|++|. +. +.++++
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~-------~~----~~~~~~---------------- 65 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDE-------NP----DIAARY---------------- 65 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT-------CH----HHHHHT----------------
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCC-------CH----HHHHhC----------------
Confidence 579999999999999999999999999999875 8999998761 22 122222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
++..+|+++++ ++|+++.++.|..+.+.|.+.|+++++
T Consensus 66 ------------------~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 66 ------------------GVMSLPTVIFF-KDGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp ------------------TCCSSCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred ------------------CccccCEEEEE-ECCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 34445888888 899999988888888889999998875
No 147
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.38 E-value=1.5e-12 Score=97.59 Aligned_cols=88 Identities=16% Similarity=0.053 Sum_probs=69.2
Q ss_pred EEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCCCch
Q psy299 67 VLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDNAHP 146 (240)
Q Consensus 67 ~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~ 146 (240)
.+||.||++||++|+...|.+.++.+++++.++.++.|.+| ++.+ +++++
T Consensus 24 ~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~-------~~~~----~~~~~------------------- 73 (126)
T 1x5e_A 24 DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVT-------EQPG----LSGRF------------------- 73 (126)
T ss_dssp EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETT-------TCHH----HHHHT-------------------
T ss_pred CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECc-------CCHH----HHHHc-------------------
Confidence 48999999999999999999999999998767999999876 1221 22222
Q ss_pred HHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhccc
Q psy299 147 LWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 147 l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
++..+|+++++ ++|++ .++.+..+.++|.+.|++++..
T Consensus 74 ---------------~v~~~Pt~~~~-~~G~~-~~~~G~~~~~~l~~~l~~~~~~ 111 (126)
T 1x5e_A 74 ---------------IINALPTIYHC-KDGEF-RRYQGPRTKKDFINFISDKEWK 111 (126)
T ss_dssp ---------------TCCSSSEEEEE-ETTEE-EECCSCCCHHHHHHHHHTCGGG
T ss_pred ---------------CCcccCEEEEE-eCCeE-EEeecCCCHHHHHHHHHHHhhc
Confidence 34455888888 89995 6777777888899999888754
No 148
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.38 E-value=1e-12 Score=100.14 Aligned_cols=104 Identities=10% Similarity=0.141 Sum_probs=76.3
Q ss_pred cCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhc--CcEEEEeecCCCCCCCCCCHHHHHHHHHhcCc
Q psy299 52 NIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDR--GLRILAFPCNQFGGQEPGDADQICEFTKKKNV 129 (240)
Q Consensus 52 d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~--~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~ 129 (240)
++++..+...-..++++||.||++||++|+...|.+.++.+++++. ++.++.|.++ .+ .++++++
T Consensus 21 ~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-------~~----~~~~~~~-- 87 (140)
T 2dj1_A 21 VLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDAT-------SA----SMLASKF-- 87 (140)
T ss_dssp ECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTT-------TC----HHHHHHT--
T ss_pred EcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCc-------cc----HHHHHHC--
Confidence 3444444322235899999999999999999999999999999876 3777777654 11 1222222
Q ss_pred ceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccC
Q psy299 130 QFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 130 ~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
++..+|+++++ ++|+ +.++.+..+.+.|.+.|++++...
T Consensus 88 --------------------------------~v~~~Pt~~~~-~~G~-~~~~~g~~~~~~l~~~l~~~~~~~ 126 (140)
T 2dj1_A 88 --------------------------------DVSGYPTIKIL-KKGQ-AVDYDGSRTQEEIVAKVREVSQPD 126 (140)
T ss_dssp --------------------------------TCCSSSEEEEE-ETTE-EEECCSCCCHHHHHHHHHHHHSSS
T ss_pred --------------------------------CCCccCeEEEE-ECCc-EEEcCCCCCHHHHHHHHHHhcCCC
Confidence 34445888888 7898 667778788888999999998664
No 149
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.38 E-value=1.1e-12 Score=99.95 Aligned_cols=96 Identities=19% Similarity=0.294 Sum_probs=74.5
Q ss_pred ccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEee
Q psy299 58 VPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKI 137 (240)
Q Consensus 58 v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~ 137 (240)
+..++.+|+++||.||++||++|+...|.++++.++++ ++.++.|++|. +. +++++++
T Consensus 39 ~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~~-------~~----~~~~~~~--------- 96 (139)
T 3d22_A 39 LSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP--SLMFLVIDVDE-------LS----DFSASWE--------- 96 (139)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------SH----HHHHHTT---------
T ss_pred HHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCcc-------cH----HHHHHcC---------
Confidence 44444569999999999999999999999999999985 59999998761 22 2333333
Q ss_pred ecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccC
Q psy299 138 NVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 138 d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
+..+|+++++ ++|+++.++.|. +.++|.+.|+++++..
T Consensus 97 -------------------------v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~~~~~ 134 (139)
T 3d22_A 97 -------------------------IKATPTFFFL-RDGQQVDKLVGA-NKPELHKKITAILDSL 134 (139)
T ss_dssp -------------------------CCEESEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHHHTS
T ss_pred -------------------------CCcccEEEEE-cCCeEEEEEeCC-CHHHHHHHHHHHhccC
Confidence 3445787777 999999988877 7788999999988764
No 150
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.38 E-value=1.6e-12 Score=93.76 Aligned_cols=89 Identities=18% Similarity=0.169 Sum_probs=70.2
Q ss_pred CCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCC
Q psy299 62 TYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNG 141 (240)
Q Consensus 62 ~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~ 141 (240)
+.+|++++|.||++||++|+...|.+.++.+++++ +.++.|.+| ..+ ++++++
T Consensus 17 ~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~-------~~~----~~~~~~-------------- 69 (105)
T 3m9j_A 17 AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVD-------DCQ----DVASES-------------- 69 (105)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETT-------TCH----HHHHHT--------------
T ss_pred hcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEhh-------hhH----HHHHHc--------------
Confidence 34689999999999999999999999999999864 899999876 122 222222
Q ss_pred CCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 142 DNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 142 ~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
++..+|+++++ ++|+++.++.|. +.+.|.+.|+++|
T Consensus 70 --------------------~v~~~Pt~~~~-~~g~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 70 --------------------EVKSMPTFQFF-KKGQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp --------------------TCCBSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred --------------------CCCcCcEEEEE-ECCeEEEEEeCC-CHHHHHHHHHHhC
Confidence 34445888888 889999988887 8888998888765
No 151
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.37 E-value=1.9e-12 Score=93.73 Aligned_cols=92 Identities=14% Similarity=0.135 Sum_probs=72.3
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.+++++|.||++||++|+...|.+.++.+++++ ++.++.|++| .+.+ .++++
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~-------~~~~----~~~~~---------------- 68 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVD-------ENPK----TAMRY---------------- 68 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETT-------TCHH----HHHHT----------------
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECC-------CCHh----HHHhC----------------
Confidence 478999999999999999999999999999986 4999999876 2221 22222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccC
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
++..+|+++++ ++|+++.++.+..+.+.|.+.|++++..+
T Consensus 69 ------------------~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~~~ 108 (109)
T 2yzu_A 69 ------------------RVMSIPTVILF-KDGQPVEVLVGAQPKRNYQAKIEKHLPAT 108 (109)
T ss_dssp ------------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTC---
T ss_pred ------------------CCCcCCEEEEE-eCCcEeeeEeCCCCHHHHHHHHHHHhhhc
Confidence 34445888888 89999998888888888999999888653
No 152
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.37 E-value=8.6e-13 Score=101.18 Aligned_cols=91 Identities=12% Similarity=0.088 Sum_probs=73.0
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.++++||.||++||++|+...|.+.++.++++++ +.++.|.+| ..+ ++++++
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~-------~~~----~l~~~~---------------- 74 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS-AVFGRINIA-------TNP----WTAEKY---------------- 74 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEETT-------TCH----HHHHHH----------------
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc-eEEEEEECC-------cCH----hHHHHC----------------
Confidence 4899999999999999999999999999999874 999999876 222 222222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhccc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
++..+|+++++ ++|+++.++.+..+.+.|.+.|+++++.
T Consensus 75 ------------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 75 ------------------GVQGTPTFKFF-CHGRPVWEQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp ------------------TCCEESEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred ------------------CCCcCCEEEEE-eCCcEEEEEcCCCCHHHHHHHHHHHhcc
Confidence 34445776666 8999999998888888899999998854
No 153
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.37 E-value=1.9e-12 Score=93.66 Aligned_cols=89 Identities=13% Similarity=0.195 Sum_probs=70.9
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.++++||.||++||++|+...|.+.++.+++++ ++.++.|.+|. +. +.++++
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~-------~~----~~~~~~---------------- 70 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDD-------NP----ETPNAY---------------- 70 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTT-------CC----HHHHHT----------------
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCC-------CH----HHHHhc----------------
Confidence 589999999999999999999999999999986 59999998762 11 122222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
++..+|+++++ ++|+++.++.|..+.+.|.+.|++++
T Consensus 71 ------------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 71 ------------------QVRSIPTLMLV-RDGKVIDKKVGALPKSQLKAWVESAQ 107 (107)
T ss_dssp ------------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHTC
T ss_pred ------------------CCCccCEEEEE-eCCEEEEEecCCCCHHHHHHHHHhcC
Confidence 34455888888 99999998888888888888887753
No 154
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.06 E-value=5e-14 Score=106.26 Aligned_cols=104 Identities=11% Similarity=0.145 Sum_probs=78.5
Q ss_pred CCcccCCCCCCcEEEEEEecCCCCCcHHHHHHH---HHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcce
Q psy299 55 GEDVPLSTYKGHVLVIVNVASRCGYTGKHYKEL---VELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQF 131 (240)
Q Consensus 55 G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L---~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~f 131 (240)
.+.+.+....||++||.||++||++|+...|.+ .++.+.+++ ++.++.|.+|. +...++++++
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~---------~~~~~~~~~~---- 74 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDT---------PEGQELARRY---- 74 (130)
Confidence 556777778899999999999999999999999 888888776 47787776541 0001111111
Q ss_pred eeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcC-CCCe--EEeccCCCCccchHHHHHHhcccC
Q psy299 132 DLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDK-NGVP--VERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 132 p~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~-~G~I--v~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
++..+|+++++|+ +|++ +.++.|..+.+.|.+.|++++++.
T Consensus 75 ------------------------------~v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 75 ------------------------------RVPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQVCVKG 118 (130)
Confidence 4555689999996 5999 888888888888999999888664
No 155
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.37 E-value=2.2e-12 Score=94.05 Aligned_cols=90 Identities=12% Similarity=0.129 Sum_probs=72.4
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.++++||.||++||++|+...|.+.++.+++++ ++.++.|.+| ..+ ++++++
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~-------~~~----~l~~~~---------------- 72 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVE-------EEK----TLFQRF---------------- 72 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETT-------TCH----HHHHHT----------------
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECC-------cCh----hHHHhc----------------
Confidence 479999999999999999999999999999986 4999999876 122 222333
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
++..+|+++++ ++|+++.++.|..+.+.|.+.|+++++
T Consensus 73 ------------------~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 73 ------------------SLKGVPQILYF-KDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp ------------------TCCSSCEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred ------------------CCCcCCEEEEE-ECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 34445888888 799999988888888889999988764
No 156
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.36 E-value=1.7e-12 Score=110.76 Aligned_cols=93 Identities=10% Similarity=0.153 Sum_probs=74.3
Q ss_pred CCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecC
Q psy299 61 STYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVN 140 (240)
Q Consensus 61 s~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~ 140 (240)
...+||++||+||++||++|+...|.+.++.++++++ +.++.|.+| .++ ++++++
T Consensus 22 ~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~vd~~-------~~~----~~~~~~------------- 76 (287)
T 3qou_A 22 EQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ-FILAKLDCD-------AEQ----MIAAQF------------- 76 (287)
T ss_dssp TTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS-SEEEEEETT-------TCH----HHHHTT-------------
T ss_pred HhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC-eEEEEEeCc-------cCH----HHHHHc-------------
Confidence 4456999999999999999999999999999999864 999999877 222 223333
Q ss_pred CCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcc
Q psy299 141 GDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 141 ~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
+|..+|+++++ ++|+++.++.+..+.+.+...|+..+.
T Consensus 77 ---------------------~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~lp 114 (287)
T 3qou_A 77 ---------------------GLRAIPTVYLF-QNGQPVDGFQGPQPEEAIRALLDXVLP 114 (287)
T ss_dssp ---------------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHSC
T ss_pred ---------------------CCCCCCeEEEE-ECCEEEEEeeCCCCHHHHHHHHHHHcC
Confidence 34455888888 799999999888888888888888773
No 157
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.36 E-value=4.2e-13 Score=109.91 Aligned_cols=109 Identities=17% Similarity=0.236 Sum_probs=82.5
Q ss_pred CeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHh
Q psy299 47 DFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKK 126 (240)
Q Consensus 47 ~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~ 126 (240)
+..+.++++..+.....+|+++||.||++||++|+...|.+.++.+++++. +.++.|.+|. .. +++++
T Consensus 96 ~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~-v~~~~vd~~~-------~~----~l~~~ 163 (210)
T 3apq_A 96 DPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL-LRIGAVNCGD-------DR----MLCRM 163 (210)
T ss_dssp CTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEEEEETTT-------CH----HHHHH
T ss_pred CCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCc-eEEEEEECCc-------cH----HHHHH
Confidence 334445555444333356899999999999999999999999999999764 9999998762 22 22222
Q ss_pred cCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccC
Q psy299 127 KNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 127 ~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
+ ++..+|+++++ ++|+++.++.|..+.+.|.+.|++++...
T Consensus 164 ~----------------------------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l~~~ 204 (210)
T 3apq_A 164 K----------------------------------GVNSYPSLFIF-RSGMAAVKYNGDRSKESLVAFAMQHVRST 204 (210)
T ss_dssp T----------------------------------TCCSSSEEEEE-CTTSCCEECCSCCCHHHHHHHHHHHHHCC
T ss_pred c----------------------------------CCCcCCeEEEE-ECCCceeEecCCCCHHHHHHHHHHhCccc
Confidence 2 34455888888 99999999988888889999999988654
No 158
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.36 E-value=2.8e-12 Score=99.86 Aligned_cols=91 Identities=13% Similarity=0.133 Sum_probs=72.5
Q ss_pred CCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCC
Q psy299 63 YKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGD 142 (240)
Q Consensus 63 ~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~ 142 (240)
.+|+++||.||++||++|+...|.+.++.++++ ++.++.|.+|. .. ++++++
T Consensus 30 ~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~-------~~----~l~~~~--------------- 81 (153)
T 2wz9_A 30 KAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--QVSFVKLEAEG-------VP----EVSEKY--------------- 81 (153)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------SH----HHHHHT---------------
T ss_pred cCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCC-------CH----HHHHHc---------------
Confidence 358999999999999999999999999999984 59999998761 22 122222
Q ss_pred CCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccC
Q psy299 143 NAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 143 ~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
++..+|++++++ +|+++.++.|. .+++|.+.|+++++..
T Consensus 82 -------------------~v~~~Pt~~~~~-~G~~~~~~~G~-~~~~l~~~i~~~l~~~ 120 (153)
T 2wz9_A 82 -------------------EISSVPTFLFFK-NSQKIDRLDGA-HAPELTKKVQRHASSG 120 (153)
T ss_dssp -------------------TCCSSSEEEEEE-TTEEEEEEESS-CHHHHHHHHHHHSCTT
T ss_pred -------------------CCCCCCEEEEEE-CCEEEEEEeCC-CHHHHHHHHHHHhccc
Confidence 344558999998 99999888774 6677999999999764
No 159
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.35 E-value=5.7e-13 Score=98.64 Aligned_cols=90 Identities=24% Similarity=0.190 Sum_probs=67.8
Q ss_pred CCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeec
Q psy299 60 LSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINV 139 (240)
Q Consensus 60 ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~ 139 (240)
+++.+|++++|.||++||++|+...|.++++.+++ ++.++.|.+| ... ++++++
T Consensus 28 l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~-------~~~----~~~~~~------------ 81 (117)
T 2xc2_A 28 LEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVD-------KLE----ETARKY------------ 81 (117)
T ss_dssp HHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETT-------TSH----HHHHHT------------
T ss_pred HHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECC-------ccH----HHHHHc------------
Confidence 34457899999999999999999999999998887 6899999876 121 222222
Q ss_pred CCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 140 NGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 140 ~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
++..+|+++++ ++|+++.++.| .++++|.+.|+++|
T Consensus 82 ----------------------~v~~~Pt~~~~-~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 82 ----------------------NISAMPTFIAI-KNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp ----------------------TCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred ----------------------CCCccceEEEE-eCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 34445775555 89999998877 56777888888764
No 160
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.35 E-value=3e-12 Score=95.56 Aligned_cols=90 Identities=19% Similarity=0.230 Sum_probs=67.6
Q ss_pred CCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCC
Q psy299 62 TYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNG 141 (240)
Q Consensus 62 ~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~ 141 (240)
+.+|++++|.||++|||+|+...|.++++.++++ ++.++.|.++. ... +.++++
T Consensus 34 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~------~~~----~~~~~~-------------- 87 (124)
T 1faa_A 34 AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCNQ------ENK----TLAKEL-------------- 87 (124)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS------TTH----HHHHHH--------------
T ss_pred hcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecCc------chH----HHHHHc--------------
Confidence 3478999999999999999999999999999887 48888887651 111 122222
Q ss_pred CCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 142 DNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 142 ~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
++..+|+ ++++++|+++.++.|.. .++|.+.|++++
T Consensus 88 --------------------~v~~~Pt-~~~~~~G~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 88 --------------------GIRVVPT-FKILKENSVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp --------------------CCSSSSE-EEEEETTEEEEEEESSC-HHHHHHHHHHHT
T ss_pred --------------------CCCeeeE-EEEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 3445587 56679999998887764 677888887765
No 161
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.35 E-value=4.3e-12 Score=92.71 Aligned_cols=89 Identities=17% Similarity=0.144 Sum_probs=69.3
Q ss_pred CCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCC
Q psy299 63 YKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGD 142 (240)
Q Consensus 63 ~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~ 142 (240)
..|++++|.||++||++|+...|.++++.++++ ++.++.|++| ...+ .++++
T Consensus 24 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~-------~~~~----~~~~~--------------- 75 (113)
T 1ti3_A 24 GSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVD-------ELKA----VAEEW--------------- 75 (113)
T ss_dssp TSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETT-------TCHH----HHHHH---------------
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEcc-------ccHH----HHHhC---------------
Confidence 468999999999999999999999999999886 5899999876 1221 11111
Q ss_pred CCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcc
Q psy299 143 NAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 143 ~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
++..+|+++++ ++|+++.++.+ .+++.|.+.|+++++
T Consensus 76 -------------------~v~~~Pt~~~~-~~G~~~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 76 -------------------NVEAMPTFIFL-KDGKLVDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp -------------------HCSSTTEEEEE-ETTEEEEEEEC-CCTTHHHHHHHHHHH
T ss_pred -------------------CCCcccEEEEE-eCCEEEEEEec-CCHHHHHHHHHHhhc
Confidence 34455887777 79999988877 577889999988874
No 162
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.34 E-value=4.7e-12 Score=91.03 Aligned_cols=90 Identities=19% Similarity=0.231 Sum_probs=68.6
Q ss_pred CCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecC
Q psy299 61 STYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVN 140 (240)
Q Consensus 61 s~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~ 140 (240)
++..|++++|.||++|||+|+...|.++++.++++ ++.++.|.+| ..+ +.++++
T Consensus 15 ~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~-------~~~----~~~~~~------------- 68 (104)
T 2vim_A 15 NENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVD-------QNE----EAAAKY------------- 68 (104)
T ss_dssp HTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETT-------TCH----HHHHHT-------------
T ss_pred HhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEecc-------CCH----HHHHHc-------------
Confidence 34578999999999999999999999999999886 6999999876 122 122222
Q ss_pred CCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 141 GDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 141 ~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
++..+|+++++ ++|+++.++.| .+.++|.+.|++++
T Consensus 69 ---------------------~v~~~Pt~~~~-~~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 69 ---------------------SVTAMPTFVFI-KDGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp ---------------------TCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred ---------------------CCccccEEEEE-eCCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 33445786666 59999988887 57777888888764
No 163
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.34 E-value=2.9e-12 Score=96.65 Aligned_cols=89 Identities=15% Similarity=0.163 Sum_probs=69.4
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
+++++||.||++||++|+...|.|.++.++++ ++.++.|.+| .+. ++++++
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d-------~~~----~l~~~~---------------- 86 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDAD-------NNS----EIVSKC---------------- 86 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETT-------TCH----HHHHHT----------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECC-------CCH----HHHHHc----------------
Confidence 68999999999999999999999999999984 5999999876 122 122222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhccc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
++..+|+++++ ++|+++.++.+ .++++|.+.|+++++.
T Consensus 87 ------------------~v~~~Pt~~i~-~~G~~~~~~~G-~~~~~l~~~l~~~l~~ 124 (125)
T 1r26_A 87 ------------------RVLQLPTFIIA-RSGKMLGHVIG-ANPGMLRQKLRDIIKD 124 (125)
T ss_dssp ------------------TCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHHHC
T ss_pred ------------------CCCcccEEEEE-eCCeEEEEEeC-CCHHHHHHHHHHHhcC
Confidence 34445885555 89999988887 5777899999888753
No 164
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.33 E-value=3.4e-12 Score=92.78 Aligned_cols=87 Identities=13% Similarity=0.088 Sum_probs=66.3
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
++++++|.||++||++|+...|.+.++.++++ ++.++.|.+| .++ ++++++
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~-------~~~----~~~~~~---------------- 70 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVH-------QCQ----GTAATN---------------- 70 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETT-------TSH----HHHHHT----------------
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEECc-------cCH----HHHHhc----------------
Confidence 58999999999999999999999999999984 5999999876 122 122222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
++..+|+++++ ++|+++.++.|.. +++|.+.|++++
T Consensus 71 ------------------~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~~l 106 (107)
T 1gh2_A 71 ------------------NISATPTFQFF-RNKVRIDQYQGAD-AVGLEEKIKQHL 106 (107)
T ss_dssp ------------------TCCSSSEEEEE-ETTEEEEEEESSC-HHHHHHHHHHHH
T ss_pred ------------------CCCcccEEEEE-ECCeEEEEEeCCC-HHHHHHHHHHhc
Confidence 34445887777 8999998887743 445888887765
No 165
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.33 E-value=3.6e-12 Score=93.61 Aligned_cols=90 Identities=11% Similarity=0.084 Sum_probs=68.9
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.++++||.||++||++|+...|.+.++.+.++ ++.++.|.+| ... +.++++
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~-------~~~----~l~~~~---------------- 68 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSE-------ARP----ELMKEL---------------- 68 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGG-------GCH----HHHHHT----------------
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCc-------CCH----HHHHHc----------------
Confidence 46899999999999999999999999998876 5888888765 111 122222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhccc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
++..+|+++++ ++|+++.++.|..++++|.+.|+..+..
T Consensus 69 ------------------~v~~~Pt~~~~-~~G~~v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 69 ------------------GFERVPTLVFI-RDGKVAKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp ------------------TCCSSCEEEEE-ESSSEEEEEESCCCHHHHHHHHHTC---
T ss_pred ------------------CCcccCEEEEE-ECCEEEEEEcCCCCHHHHHHHHHHHhhh
Confidence 34455888888 9999999999888888888888876643
No 166
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.33 E-value=6.3e-12 Score=90.67 Aligned_cols=89 Identities=27% Similarity=0.286 Sum_probs=67.6
Q ss_pred CCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCC
Q psy299 63 YKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGD 142 (240)
Q Consensus 63 ~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~ 142 (240)
.+|++++|.||++||++|+...|.++++.++++. ++.++.|.+| .+. ++++++
T Consensus 18 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~-------~~~----~~~~~~--------------- 70 (106)
T 1xwb_A 18 ASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVLKVDVD-------ECE----DIAMEY--------------- 70 (106)
T ss_dssp HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETT-------TCH----HHHHHT---------------
T ss_pred cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC-CeEEEEEecc-------chH----HHHHHc---------------
Confidence 4689999999999999999999999999999874 5999999876 122 122222
Q ss_pred CCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 143 NAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 143 ~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
++..+|+++++ ++|+++.++.| .+++.|.+.|+++|
T Consensus 71 -------------------~v~~~Pt~~~~-~~G~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 71 -------------------NISSMPTFVFL-KNGVKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp -------------------TCCSSSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHTC
T ss_pred -------------------CCCcccEEEEE-cCCcEEEEEcC-CCHHHHHHHHHHhC
Confidence 33445775544 89999998887 57777888887764
No 167
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.32 E-value=6.2e-12 Score=96.11 Aligned_cols=90 Identities=13% Similarity=0.173 Sum_probs=71.3
Q ss_pred CcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCCC
Q psy299 65 GHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDNA 144 (240)
Q Consensus 65 gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~ 144 (240)
++.+||.||++||++|+...|.+.++.+++++ ++.++.|.+|. +. ++++++
T Consensus 50 ~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~-------~~----~l~~~~----------------- 100 (140)
T 1v98_A 50 APLTLVDFFAPWCGPCRLVSPILEELARDHAG-RLKVVKVNVDE-------HP----GLAARY----------------- 100 (140)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTT-------CH----HHHHHT-----------------
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCC-------CH----HHHHHC-----------------
Confidence 33399999999999999999999999999986 49999998761 22 122222
Q ss_pred chHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhccc
Q psy299 145 HPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 145 ~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
++..+|+++++ ++|+++.++.|..+.+.|.+.|++++++
T Consensus 101 -----------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 101 -----------------GVRSVPTLVLF-RRGAPVATWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp -----------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred -----------------CCCccCEEEEE-eCCcEEEEEeCCCCHHHHHHHHHHHHcc
Confidence 34445887777 7999999888888888899999998875
No 168
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.32 E-value=3.8e-12 Score=94.28 Aligned_cols=85 Identities=20% Similarity=0.235 Sum_probs=64.3
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
+|+++||.||++||++|+...|.|+++.+++++ +.++.|.+| .+. ++++++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~-------~~~----~l~~~~---------------- 79 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVD-------ESP----DIAKEC---------------- 79 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETT-------TCH----HHHHHT----------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECC-------CCH----HHHHHC----------------
Confidence 479999999999999999999999999999875 899999876 122 222222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHH
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEI 197 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ 197 (240)
++..+|+++++ ++|+++.++.|.. .+.|.+.|++
T Consensus 80 ------------------~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 80 ------------------EVTAMPTFVLG-KDGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp ------------------TCCSBSEEEEE-ETTEEEEEEESSC-HHHHHHHHHT
T ss_pred ------------------CCCcccEEEEE-eCCeEEEEEeCCC-HHHHHHHHHh
Confidence 34445776555 9999999887766 6667666654
No 169
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.32 E-value=5.8e-12 Score=92.52 Aligned_cols=88 Identities=18% Similarity=0.205 Sum_probs=67.8
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.|+++||.||++||++|+...|.+.++.++++ ++.++.|.+|. .. ++++++
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~-------~~----~~~~~~---------------- 75 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDE-------VS----EVTEKE---------------- 75 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------TH----HHHHHT----------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCC-------CH----HHHHHc----------------
Confidence 58999999999999999999999999999886 59999998761 22 222322
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
++..+|+++++ ++|+++.++.|. +.++|.+.|+++++
T Consensus 76 ------------------~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l~ 112 (112)
T 1syr_A 76 ------------------NITSMPTFKVY-KNGSSVDTLLGA-NDSALKQLIEKYAA 112 (112)
T ss_dssp ------------------TCCSSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHTTC-
T ss_pred ------------------CCCcccEEEEE-ECCcEEEEEeCC-CHHHHHHHHHHhhC
Confidence 34445775554 799999988887 77889888888764
No 170
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.32 E-value=4.8e-12 Score=93.20 Aligned_cols=90 Identities=19% Similarity=0.234 Sum_probs=69.1
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.|+++||.||++||++|+...|.++++.++++ ++.++.|.+|. .. ++++++
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~-------~~----~~~~~~---------------- 77 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDE-------LK----DVAEAY---------------- 77 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------SH----HHHHHT----------------
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEccc-------CH----HHHHHc----------------
Confidence 48999999999999999999999999999987 68999998761 21 222222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccC
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
++..+|+++++ ++|+++.++.| .++++|.+.|+++++..
T Consensus 78 ------------------~v~~~Pt~~~~-~~g~~~~~~~g-~~~~~l~~~l~~~~~~~ 116 (118)
T 2vm1_A 78 ------------------NVEAMPTFLFI-KDGEKVDSVVG-GRKDDIHTKIVALMGSA 116 (118)
T ss_dssp ------------------TCCSBSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHHHC--
T ss_pred ------------------CCCcCcEEEEE-eCCeEEEEecC-CCHHHHHHHHHHHhccc
Confidence 33445786666 89999988877 47788999999988653
No 171
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.32 E-value=2.1e-12 Score=98.47 Aligned_cols=93 Identities=9% Similarity=0.087 Sum_probs=68.2
Q ss_pred EEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCH---HHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 67 VLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDA---DQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 67 ~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~---e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
++||+||++||++|+.+.|.+.++.++++ +.++.|.++.. .+. +...+.++++
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~-----~~~~~~d~~~~l~~~~---------------- 88 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSL-----IGERELSAARLEMNKA---------------- 88 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTT-----CCHHHHHHHHHHHHHH----------------
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCc-----hhhhhhhhhHHHHHHc----------------
Confidence 99999999999999999999999998875 88888887521 111 1122222222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccC
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
++..+|++++++ +|+++.++.|..+.+.+.+.++++++.+
T Consensus 89 ------------------~v~~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~i~~~~~~~ 128 (135)
T 3emx_A 89 ------------------GVEGTPTLVFYK-EGRIVDKLVGATPWSLKVEKAREIYGGE 128 (135)
T ss_dssp ------------------TCCSSSEEEEEE-TTEEEEEEESCCCHHHHHHHHHHHC---
T ss_pred ------------------CCceeCeEEEEc-CCEEEEEEeCCCCHHHHHHHHHHHhCCC
Confidence 455568655555 9999999999888888999999998664
No 172
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.32 E-value=3.2e-12 Score=94.71 Aligned_cols=91 Identities=15% Similarity=0.184 Sum_probs=71.0
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.|+++||.||++||++|+...|.+.++.+++++ ++.++.|.+| .+.+ +++++
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~-------~~~~----~~~~~---------------- 80 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVD-------TNPE----TARNF---------------- 80 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETT-------TCHH----HHHHT----------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECC-------CCHH----HHHhc----------------
Confidence 479999999999999999999999999999876 4999999876 1221 22222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhccc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
++..+|+++++ ++|+++.++.|..+.+.|.+.|++++++
T Consensus 81 ------------------~i~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~l~~ 119 (121)
T 2i1u_A 81 ------------------QVVSIPTLILF-KDGQPVKRIVGAKGKAALLRELSDVVPN 119 (121)
T ss_dssp ------------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTCSCCCC
T ss_pred ------------------CCCcCCEEEEE-ECCEEEEEecCCCCHHHHHHHHHHHHhh
Confidence 34445887766 6999999988888887888888777654
No 173
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.31 E-value=1.1e-12 Score=97.69 Aligned_cols=105 Identities=11% Similarity=0.164 Sum_probs=74.9
Q ss_pred eecCCCCcccCCC-C--CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHh
Q psy299 50 VKNIKGEDVPLST-Y--KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKK 126 (240)
Q Consensus 50 l~d~~G~~v~ls~-~--~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~ 126 (240)
+.+.+|...++.+ . .|+++||.||++||++|+...|.|.++.+++ .++.++.|.+| .+. +++++
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~-------~~~----~~~~~ 71 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVD-------KNG----NAADA 71 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETT-------TCH----HHHHH
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECC-------CCH----HHHHh
Confidence 3455666655542 2 4899999999999999999999999999998 46999999876 222 12222
Q ss_pred cCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcC---CCCeEEeccCCCCccchHHHHHHhcccC
Q psy299 127 KNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDK---NGVPVERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 127 ~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~---~G~Iv~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
+ ++..+|++++++. +|+++.++.|..+ ++|++.+++....+
T Consensus 72 ~----------------------------------~i~~~Pt~~~~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~~~~~ 115 (118)
T 2f51_A 72 Y----------------------------------GVSSIPALFFVKKEGNEIKTLDQFVGADV-SRIKADIEKFKHHH 115 (118)
T ss_dssp T----------------------------------TCCSSSEEEEEEEETTEEEEEEEEESCCH-HHHHHHHHHHC---
T ss_pred c----------------------------------CCCCCCEEEEEeCCCCcceEEEeecCCCH-HHHHHHHHHhhhcc
Confidence 2 3445588899976 4999988887654 45888887766543
No 174
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.30 E-value=3.8e-12 Score=94.38 Aligned_cols=90 Identities=13% Similarity=0.130 Sum_probs=63.7
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.|++++|+||++|||+|+...|.|.++.++++. .++.+.++. ..+.+...+++++++
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~---~v~~~~~~~-----~~~~~~~~~~~~~~~--------------- 84 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETKA---HIYFINSEE-----PSQLNDLQAFRSRYG--------------- 84 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC---CCEEEETTC-----GGGHHHHHHHHHHHT---------------
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC---eEEEEECCC-----cCcHHHHHHHHHHcC---------------
Confidence 478999999999999999999999999988753 344555441 112233444444333
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHH
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIE 196 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~ 196 (240)
+..+|+++++ ++|+++.++.|..+.+.|.+.|+
T Consensus 85 -------------------i~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 85 -------------------IPTVPGFVHI-TDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp -------------------CCSSCEEEEE-ETTEEEEECCTTCCHHHHHHHHT
T ss_pred -------------------CCCCCeEEEE-ECCEEEEEecCCCCHHHHHHHhh
Confidence 4455888888 58999998888777776766653
No 175
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.30 E-value=1.4e-11 Score=101.69 Aligned_cols=95 Identities=18% Similarity=0.191 Sum_probs=76.1
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
+++++||.||++||++|+.+.|.+.++.++++++ +.++.|.+|. +.+ .++++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~-------~~~----l~~~~---------------- 80 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NPG----TAPKY---------------- 80 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CTT----TGGGG----------------
T ss_pred cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCC-------CHH----HHHHc----------------
Confidence 5899999999999999999999999999999875 9999998762 100 00111
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCC
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIK 205 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~ 205 (240)
++..+|+++++ ++|+++.++.+..+.+.|.+.|+++++.....
T Consensus 81 ------------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~~~~~~ 123 (222)
T 3dxb_A 81 ------------------GIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLAGSAME 123 (222)
T ss_dssp ------------------TCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHSCCSCCB
T ss_pred ------------------CCCcCCEEEEE-ECCeEEEEeccccChHHHHHHHHhhccccccc
Confidence 45566887777 58999999988888999999999999876443
No 176
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.30 E-value=7.4e-12 Score=98.00 Aligned_cols=91 Identities=10% Similarity=0.027 Sum_probs=66.9
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.++++||.|||+||++|+..-|.|.++.++++++ +.|+-|.+|.. ++ +++++
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~-v~f~kVDVDe~-------~e----~a~~y---------------- 91 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF-CVIYLVDITEV-------PD----FNTMY---------------- 91 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETTTC-------CT----TTTTT----------------
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC-cEEEEEECCCC-------HH----HHHHc----------------
Confidence 4689999999999999999999999999999864 88888987721 00 11111
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeE--E-------eccCCCC-ccchHHHHHHhccc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPV--E-------RHAANAS-PASLIPHIEILGRT 201 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv--~-------~~~~~~~-~~~l~~~L~~ll~~ 201 (240)
+|..+|+++++ ++|+.+ . +..+..+ .++|.+.|++++.+
T Consensus 92 ------------------~V~siPT~~fF-k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~ 140 (160)
T 2av4_A 92 ------------------ELYDPVSVMFF-YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRG 140 (160)
T ss_dssp ------------------TCCSSEEEEEE-ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHH
T ss_pred ------------------CCCCCCEEEEE-ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHH
Confidence 45556787666 778777 4 5666555 66788888877744
No 177
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.29 E-value=7.4e-12 Score=96.58 Aligned_cols=91 Identities=16% Similarity=0.037 Sum_probs=66.9
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.|+++||+||++||++|+.+.|.|.++.++++++ +.++.|.+|. +++ ++++
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~-------~~~----~~~~----------------- 72 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDITE-------VPD----FNKM----------------- 72 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETTT-------CCT----TTTS-----------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-eEEEEEcccc-------CHH----HHHH-----------------
Confidence 4899999999999999999999999999999764 8999998762 100 0000
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEe---------ccCCCC-ccchHHHHHHhccc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVER---------HAANAS-PASLIPHIEILGRT 201 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~---------~~~~~~-~~~l~~~L~~ll~~ 201 (240)
.++..+|+++++ ++|+++.+ ..+..+ .+++.+.|++++++
T Consensus 73 -----------------~~i~~~Pt~~~~-~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~ 122 (142)
T 1qgv_A 73 -----------------YELYDPCTVMFF-FRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRG 122 (142)
T ss_dssp -----------------SCSCSSCEEEEE-ETTEEEEEECC------CCSCCSCHHHHHHHHHHHHHH
T ss_pred -----------------cCCCCCCEEEEE-ECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHHH
Confidence 146667898888 57888763 233333 56688888888865
No 178
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=3.3e-12 Score=97.36 Aligned_cols=91 Identities=12% Similarity=0.038 Sum_probs=68.2
Q ss_pred CCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecC
Q psy299 61 STYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVN 140 (240)
Q Consensus 61 s~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~ 140 (240)
.+.+++++||.||++||++|+...|.++++.+++++.++.++.|.+| .. .++++++++..+.
T Consensus 22 ~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~-------~~----~~~~~~~~v~~~~------- 83 (137)
T 2dj0_A 22 ERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVG-------RY----TDVSTRYKVSTSP------- 83 (137)
T ss_dssp HHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTT-------TC----HHHHHHTTCCCCS-------
T ss_pred hcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCc-------cC----HHHHHHccCcccC-------
Confidence 33456799999999999999999999999999998767999999766 22 2345556653210
Q ss_pred CCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccch
Q psy299 141 GDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASL 191 (240)
Q Consensus 141 ~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l 191 (240)
.+..+|+++++ ++|+++.++.+..+.+.|
T Consensus 84 ---------------------~~~~~Pt~~~~-~~G~~~~~~~G~~~~~~l 112 (137)
T 2dj0_A 84 ---------------------LTKQLPTLILF-QGGKEAMRRPQIDKKGRA 112 (137)
T ss_dssp ---------------------SSSCSSEEEEE-SSSSEEEEESCBCSSSCB
T ss_pred ---------------------CcCCCCEEEEE-ECCEEEEEecCcCchHHH
Confidence 23456888888 899999888776665554
No 179
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.28 E-value=4.2e-12 Score=94.40 Aligned_cols=91 Identities=14% Similarity=0.048 Sum_probs=69.6
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.++++||.||++||++|+...|.+.++.+++++ ++.++.|.+|. .. ++++++
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------~~----~~~~~~---------------- 71 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQA-------YP----QTCQKA---------------- 71 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTT-------CH----HHHHHT----------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcC-------CH----HHHHHc----------------
Confidence 478999999999999999999999999999987 59999998761 22 122222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCC----CCccchHHHHHHhccc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAAN----ASPASLIPHIEILGRT 201 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~----~~~~~l~~~L~~ll~~ 201 (240)
++..+|++++++++|++ .++.+. .+.+.|.+.|+++++.
T Consensus 72 ------------------~v~~~Pt~~~~~~~~~~-~~~~g~~~~~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 72 ------------------GIKAYPSVKLYQYERAK-KSIWEEQINSRDAKTIAALIYGKLET 114 (122)
T ss_dssp ------------------TCCSSSEEEEEEEEGGG-TEEEEEEECCSCHHHHHHHHHHHHHC
T ss_pred ------------------CCCccceEEEEeCCCcc-ceeeccccCcCCHHHHHHHHHHHHHh
Confidence 34456899999888873 334333 5778899999998865
No 180
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.28 E-value=1.4e-11 Score=92.50 Aligned_cols=90 Identities=2% Similarity=-0.165 Sum_probs=66.9
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhh----cCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeec
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRD----RGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINV 139 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~----~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~ 139 (240)
.++++||.||++||++|+...|.+.++.+++.. .++.++.|.+| ... ++++++
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~-------~~~----~l~~~~------------ 88 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGE-------KYP----DVIERM------------ 88 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETT-------TCH----HHHHHT------------
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcc-------ccH----hHHHhc------------
Confidence 489999999999999999999999999998763 25888888766 121 223333
Q ss_pred CCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeE-EeccCCCCccchHHHHHHh
Q psy299 140 NGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPV-ERHAANASPASLIPHIEIL 198 (240)
Q Consensus 140 ~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv-~~~~~~~~~~~l~~~L~~l 198 (240)
++...|+++++++.+++. ..+.+..+.+.|.+.|+++
T Consensus 89 ----------------------~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 89 ----------------------RVSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp ----------------------TCCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred ----------------------CCccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 344458889998777754 5666777777788877664
No 181
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.25 E-value=1.5e-11 Score=89.45 Aligned_cols=87 Identities=20% Similarity=0.242 Sum_probs=67.4
Q ss_pred CcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhc--CcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCC
Q psy299 65 GHVLVIVNVASRCGYTGKHYKELVELDEKFRDR--GLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGD 142 (240)
Q Consensus 65 gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~--~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~ 142 (240)
++++||.||++||++|+...|.+.++.+++... ++.++.|.+| ...+ +++++
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~-------~~~~----l~~~~--------------- 74 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCT-------AERN----ICSKY--------------- 74 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETT-------TCHH----HHHHT---------------
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecc-------ccHh----HHHhc---------------
Confidence 789999999999999999999999999987654 6888888766 1222 23333
Q ss_pred CCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHH
Q psy299 143 NAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEI 197 (240)
Q Consensus 143 ~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ 197 (240)
++..+|+++++ ++|+++.++.+..+.+.|.+.|++
T Consensus 75 -------------------~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~ 109 (111)
T 3uvt_A 75 -------------------SVRGYPTLLLF-RGGKKVSEHSGGRDLDSLHRFVLS 109 (111)
T ss_dssp -------------------TCCSSSEEEEE-ETTEEEEEECSCCSHHHHHHHHHH
T ss_pred -------------------CCCcccEEEEE-eCCcEEEeccCCcCHHHHHHHHHh
Confidence 34445776666 899999999888888888887765
No 182
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.25 E-value=9.5e-12 Score=93.48 Aligned_cols=90 Identities=17% Similarity=0.165 Sum_probs=66.1
Q ss_pred CCcEEEEEEecCCCC--------------CcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCc
Q psy299 64 KGHVLVIVNVASRCG--------------YTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNV 129 (240)
Q Consensus 64 ~gk~vlv~F~atwCp--------------~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~ 129 (240)
.||++||.||++||+ +|+...|.+.++.++++++ +.++.|.+|. +.
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~-~~~~~vd~d~-------~~------------ 79 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP------------ 79 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTS-------CT------------
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCC-eEEEEEECCC-------CH------------
Confidence 589999999999999 9999999999999998874 8999998762 10
Q ss_pred ceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcc
Q psy299 130 QFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 130 ~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
... +. .++..+|+++++ ++|+++.++.|..+.++|.+.|+++|+
T Consensus 80 ------------~l~----~~----------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 123 (123)
T 1oaz_A 80 ------------GTA----PK----------YGIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 123 (123)
T ss_dssp ------------TTG----GG----------GTCCBSSEEEEE-ESSSEEEEEESCCCHHHHHHHHTTTCC
T ss_pred ------------HHH----HH----------cCCCccCEEEEE-ECCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 000 00 156667999999 999999998888888888888887653
No 183
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.24 E-value=2.4e-11 Score=93.19 Aligned_cols=87 Identities=13% Similarity=0.027 Sum_probs=71.2
Q ss_pred cEEEEEEecCCC--CCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 66 HVLVIVNVASRC--GYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 66 k~vlv~F~atwC--p~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
+++||+|||+|| ++|++..|.|.++.++|.++ +.++-|.+| +-.+.+.+|+
T Consensus 34 ~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~-v~~~KVdvD-----------e~~~la~~yg--------------- 86 (137)
T 2qsi_A 34 KIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR-LVAAEVAAE-----------AERGLMARFG--------------- 86 (137)
T ss_dssp SEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT-EEEEEECGG-----------GHHHHHHHHT---------------
T ss_pred CcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC-cEEEEEECC-----------CCHHHHHHcC---------------
Confidence 499999999999 99999999999999999874 999999665 2234444444
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
|+.+|+.+++ ++|+++.+..|..+.++|.+.|++++
T Consensus 87 -------------------V~siPTlilF-kdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 87 -------------------VAVCPSLAVV-QPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp -------------------CCSSSEEEEE-ECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred -------------------CccCCEEEEE-ECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 4445776666 99999999999888888999998887
No 184
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.23 E-value=1.2e-11 Score=90.93 Aligned_cols=92 Identities=13% Similarity=0.161 Sum_probs=70.4
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhc--CcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDR--GLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNG 141 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~--~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~ 141 (240)
+++++||.||++||++|+...|.+.++.+++++. ++.++.|.++. + +
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~-------~---------------~--------- 71 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE-------E---------------S--------- 71 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT-------C---------------C---------
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC-------C---------------H---------
Confidence 5799999999999999999999999999998864 47777776541 0 0
Q ss_pred CCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeE--EeccCCCCccchHHHHHHhccc
Q psy299 142 DNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPV--ERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 142 ~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv--~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
.+...+ ++..+|+++++ ++|+++ .++.+..+.+.|.+.|+++++.
T Consensus 72 ----~~~~~~----------~v~~~Pt~~~~-~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~ 118 (120)
T 1mek_A 72 ----DLAQQY----------GVRGYPTIKFF-RNGDTASPKEYTAGREADDIVNWLKKRTGP 118 (120)
T ss_dssp ----SSHHHH----------TCCSSSEEEEE-ESSCSSSCEECCCCSSHHHHHHHHHTTSCC
T ss_pred ----HHHHHC----------CCCcccEEEEE-eCCCcCCcccccCccCHHHHHHHHHhccCC
Confidence 011111 45667998988 788877 7777877888899999888764
No 185
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.22 E-value=3.3e-11 Score=92.79 Aligned_cols=92 Identities=12% Similarity=-0.039 Sum_probs=73.6
Q ss_pred CCcEEEEEEecCC--CCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCC
Q psy299 64 KGHVLVIVNVASR--CGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNG 141 (240)
Q Consensus 64 ~gk~vlv~F~atw--Cp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~ 141 (240)
.++++||+||++| |++|++..|.|.++.++|.++.+.|+-|.+ ++-.+.+.+|++
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdv-----------De~~~lA~~ygV------------ 89 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADL-----------EQSEAIGDRFGA------------ 89 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCH-----------HHHHHHHHHHTC------------
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEEC-----------CCCHHHHHHcCC------------
Confidence 4578999999999 999999999999999999864489988854 444555555554
Q ss_pred CCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhccc
Q psy299 142 DNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 142 ~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
+.+|+.+++ ++|+++.+..|..+.+.|.+.|+++++.
T Consensus 90 ----------------------~sIPTlilF-k~G~~v~~~~G~~~k~~l~~~i~~~l~~ 126 (140)
T 2qgv_A 90 ----------------------FRFPATLVF-TGGNYRGVLNGIHPWAELINLMRGLVEP 126 (140)
T ss_dssp ----------------------CSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred ----------------------ccCCEEEEE-ECCEEEEEEecCCCHHHHHHHHHHHhcC
Confidence 334776555 9999999999988888899999998854
No 186
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.21 E-value=3.3e-11 Score=99.74 Aligned_cols=103 Identities=9% Similarity=0.163 Sum_probs=75.9
Q ss_pred cCCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcC--cEEEEeecCCCCCCCCCCHHHHHHHHHhcCc
Q psy299 52 NIKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRG--LRILAFPCNQFGGQEPGDADQICEFTKKKNV 129 (240)
Q Consensus 52 d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~--v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~ 129 (240)
.++++.+...-.+|+++||+||++||++|+...|.+.++.+++++.+ +.++.|.+| .+. ++++++
T Consensus 19 ~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~-------~~~----~l~~~~-- 85 (241)
T 3idv_A 19 VLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDAT-------SAS----VLASRF-- 85 (241)
T ss_dssp EECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETT-------TCH----HHHHHT--
T ss_pred EecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEecc-------CCH----HHHHhc--
Confidence 34444444333468999999999999999999999999999999865 888888765 122 233333
Q ss_pred ceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhccc
Q psy299 130 QFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 130 ~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
++..+|++++++ +|+++ .+.+..+.+.|.+.+.+.+..
T Consensus 86 --------------------------------~v~~~Pt~~~~~-~g~~~-~~~g~~~~~~l~~~i~~~~~~ 123 (241)
T 3idv_A 86 --------------------------------DVSGYPTIKILK-KGQAV-DYEGSRTQEEIVAKVREVSQP 123 (241)
T ss_dssp --------------------------------TCCSSSEEEEEE-TTEEE-ECCSCSCHHHHHHHHHHHHST
T ss_pred --------------------------------CCCcCCEEEEEc-CCCcc-cccCcccHHHHHHHHhhccCc
Confidence 344458888885 67766 477778888899999888765
No 187
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.21 E-value=7.5e-12 Score=93.83 Aligned_cols=91 Identities=21% Similarity=0.219 Sum_probs=69.8
Q ss_pred CCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCC
Q psy299 63 YKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGD 142 (240)
Q Consensus 63 ~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~ 142 (240)
..|++++|.||++||++|+...|.|.++.++++ ++.++.|.+|. +.+ +++++
T Consensus 34 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~-------~~~----~~~~~--------------- 85 (130)
T 1wmj_A 34 EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDE-------LKE----VAEKY--------------- 85 (130)
T ss_dssp TTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTT-------SGG----GHHHH---------------
T ss_pred hcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccc-------hHH----HHHHc---------------
Confidence 468999999999999999999999999999986 58888887651 111 11111
Q ss_pred CCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccC
Q psy299 143 NAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 143 ~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
++..+|+++++ ++|+++.++.+ .+.++|.+.|+++++..
T Consensus 86 -------------------~v~~~Pt~~~~-~~g~~~~~~~g-~~~~~l~~~l~~~~~~~ 124 (130)
T 1wmj_A 86 -------------------NVEAMPTFLFI-KDGAEADKVVG-ARKDDLQNTIVKHVGAT 124 (130)
T ss_dssp -------------------TCCSSCCCCBC-TTTTCCBCCCT-TCTTTHHHHHHHHTSSS
T ss_pred -------------------CCCccceEEEE-eCCeEEEEEeC-CCHHHHHHHHHHHHhcc
Confidence 34455775555 89999988877 47788999999998764
No 188
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.82 E-value=1.7e-12 Score=93.36 Aligned_cols=89 Identities=16% Similarity=0.203 Sum_probs=67.8
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.+++++|.||++|||+|+...|.++++.+++++ ++.++.|.+|. +. +.++++
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~-------~~----~~~~~~---------------- 69 (106)
T 2yj7_A 18 SDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDE-------NP----NTAAQY---------------- 69 (106)
Confidence 578999999999999999999999999999886 48888886551 11 111111
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
++..+|+++++ ++|+++.++.|..+.+.|.+.|+++|
T Consensus 70 ------------------~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 2yj7_A 70 ------------------GIRSIPTLLLF-KNGQVVDRLVGAQPKEALKERIDKHL 106 (106)
Confidence 34445888888 89999988888777778888877654
No 189
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.19 E-value=6.6e-12 Score=98.23 Aligned_cols=91 Identities=15% Similarity=0.170 Sum_probs=59.0
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHH--HHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDE--KFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNG 141 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~--~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~ 141 (240)
.||++||+|||+||++|+...|.+.+..+ .+.+ ..++.|.+|. +..+ ..
T Consensus 43 ~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~--~~fv~V~vD~----e~~~------------~~----------- 93 (151)
T 3ph9_A 43 SKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ--NKFIMLNLMH----ETTD------------KN----------- 93 (151)
T ss_dssp HTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH--HTCEEEEESS----CCSC------------GG-----------
T ss_pred cCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh--cCeEEEEecC----Cchh------------hH-----------
Confidence 58999999999999999999998886422 2222 2345555541 0000 00
Q ss_pred CCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCC-------CCcc---chHHHHHHhcc
Q psy299 142 DNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAAN-------ASPA---SLIPHIEILGR 200 (240)
Q Consensus 142 ~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~-------~~~~---~l~~~L~~ll~ 200 (240)
. ...+.++|+++++|++|+++.+..|. ..++ .+.+.+++.++
T Consensus 94 ---~--------------~~~v~~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al~ 145 (151)
T 3ph9_A 94 ---L--------------SPDGQYVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKALR 145 (151)
T ss_dssp ---G--------------CTTCCCSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHHHS
T ss_pred ---h--------------hcCCCCCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHHHHHHH
Confidence 0 00345669999999999999988776 3333 36666666554
No 190
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.18 E-value=1.1e-10 Score=80.90 Aligned_cols=83 Identities=14% Similarity=0.078 Sum_probs=62.4
Q ss_pred cEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCCCc
Q psy299 66 HVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDNAH 145 (240)
Q Consensus 66 k~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~ 145 (240)
.+.++.||++|||+|+...|.++++.+++++ ++.++.|.+|. +. -+ ..
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~-------~~---------------~~---------~~ 50 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVME-------NP---------------QK---------AM 50 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESSS-------SC---------------CT---------TT
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECCC-------CH---------------HH---------HH
Confidence 5789999999999999999999999999875 58999998761 00 00 00
Q ss_pred hHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 146 PLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 146 ~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
..++..+|++++ +|++ ++.|..+.++|.+.|+++|
T Consensus 51 --------------~~~v~~~Pt~~~---~G~~--~~~G~~~~~~l~~~l~~~l 85 (85)
T 1fo5_A 51 --------------EYGIMAVPTIVI---NGDV--EFIGAPTKEALVEAIKKRL 85 (85)
T ss_dssp --------------STTTCCSSEEEE---TTEE--ECCSSSSSHHHHHHHHHHC
T ss_pred --------------HCCCcccCEEEE---CCEE--eeecCCCHHHHHHHHHHhC
Confidence 014556688777 8887 6667677888988888764
No 191
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.17 E-value=3.2e-11 Score=83.57 Aligned_cols=83 Identities=19% Similarity=0.152 Sum_probs=61.8
Q ss_pred EEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCCCch
Q psy299 67 VLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDNAHP 146 (240)
Q Consensus 67 ~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~ 146 (240)
+.++.||++|||+|+...|.++++.+++++ ++.++.|.+|. +.+ .++++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~-------~~~----~~~~~------------------- 51 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMV-------DRE----KAIEY------------------- 51 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTT-------CGG----GGGGT-------------------
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCC-------CHH----HHHhC-------------------
Confidence 468999999999999999999999999986 48898887651 110 11111
Q ss_pred HHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcc
Q psy299 147 LWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 147 l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
++..+|++++ +|++ ++.|..+.++|.+.|+++++
T Consensus 52 ---------------~v~~~Pt~~~---~G~~--~~~G~~~~~~l~~~l~~~le 85 (85)
T 1nho_A 52 ---------------GLMAVPAIAI---NGVV--RFVGAPSREELFEAINDEME 85 (85)
T ss_dssp ---------------CSSCSSEEEE---TTTE--EEECSSCCHHHHHHHHHHCC
T ss_pred ---------------CceeeCEEEE---CCEE--EEccCCCHHHHHHHHHHHhC
Confidence 4555688777 8887 55666677889999988763
No 192
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.16 E-value=8.4e-11 Score=93.91 Aligned_cols=87 Identities=8% Similarity=-0.010 Sum_probs=57.2
Q ss_pred ccCCCCCCcEEEEEEecCCCCCcHHHHHH---HHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeee
Q psy299 58 VPLSTYKGHVLVIVNVASRCGYTGKHYKE---LVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLF 134 (240)
Q Consensus 58 v~ls~~~gk~vlv~F~atwCp~C~~~~~~---L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~ 134 (240)
+......||++||+|||+||++|+...+. ..++.+.+.+ ++.++.|..| ..++..+.|..
T Consensus 32 ~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~d-------e~~~l~~~y~~--------- 94 (173)
T 3ira_A 32 FEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDRE-------ERPDIDNIYMT--------- 94 (173)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETT-------TCHHHHHHHHH---------
T ss_pred HHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCCc-------ccCcHHHHHHH---------
Confidence 33444568999999999999999998773 2455566655 4777777654 23333333221
Q ss_pred EeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEec
Q psy299 135 EKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERH 182 (240)
Q Consensus 135 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~ 182 (240)
..+.+ .++.++|+++++|++|+++...
T Consensus 95 ------------~~q~~---------~gv~g~Pt~v~l~~dG~~v~~~ 121 (173)
T 3ira_A 95 ------------VCQII---------LGRGGWPLNIIMTPGKKPFFAG 121 (173)
T ss_dssp ------------HHHHH---------HSCCCSSEEEEECTTSCEEEEE
T ss_pred ------------HHHHH---------cCCCCCcceeeECCCCCceeee
Confidence 00111 0456679999999999999863
No 193
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.15 E-value=1.1e-10 Score=88.97 Aligned_cols=42 Identities=21% Similarity=0.080 Sum_probs=37.5
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
+|+++||+||++||++|+...|.|.++.+++. ++.++.|.+|
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~ 70 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVN 70 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCS
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhh
Confidence 46899999999999999999999999999885 5888888765
No 194
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.14 E-value=2.2e-10 Score=94.13 Aligned_cols=90 Identities=10% Similarity=0.007 Sum_probs=68.3
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhh---cCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRD---RGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVN 140 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~---~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~ 140 (240)
.+++++|.||++||++|+...|.++++.+++++ .++.++.|.+|. .. +.++++
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~-------~~----~l~~~~------------- 188 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE-------YP----EWADQY------------- 188 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGG-------CH----HHHHHT-------------
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEccc-------CH----HHHHhC-------------
Confidence 345559999999999999999999999999984 368888887651 11 122222
Q ss_pred CCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhc
Q psy299 141 GDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 141 ~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
++..+|+++++ ++|+.+.++.|..+.+.|.+.|++++
T Consensus 189 ---------------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 189 ---------------------NVMAVPKIVIQ-VNGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp ---------------------TCCSSCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred ---------------------CCcccCeEEEE-eCCceeEEEcCCCCHHHHHHHHHHhh
Confidence 34455885555 79999988888888888988888776
No 195
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.11 E-value=2.7e-10 Score=95.16 Aligned_cols=95 Identities=16% Similarity=0.090 Sum_probs=69.6
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhh--cCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRD--RGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNG 141 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~--~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~ 141 (240)
.++++||.||++||++|+...|.+.++++++++ .++.++.|.++. +...+.++++
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~---------~~~~~l~~~~-------------- 85 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAE---------ETNSAVCRDF-------------- 85 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTS---------TTTHHHHHHT--------------
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCc---------hhhHHHHHHc--------------
Confidence 469999999999999999999999999999987 369999998751 1112233333
Q ss_pred CCCchHHHHHhhhcCCcccccccccceEEEEcCC-----CCeEEeccCCCCccchHHHHHHhcccCC
Q psy299 142 DNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKN-----GVPVERHAANASPASLIPHIEILGRTSA 203 (240)
Q Consensus 142 ~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~-----G~Iv~~~~~~~~~~~l~~~L~~ll~~~~ 203 (240)
++...|+++++++. |+.+ .+.+ .+.+.|.+.|.+++....
T Consensus 86 --------------------~v~~~Pt~~~~~~g~~~~~g~~~-~~~g-~~~~~l~~~i~~~l~~~~ 130 (244)
T 3q6o_A 86 --------------------NIPGFPTVRFFXAFTXNGSGAVF-PVAG-ADVQTLRERLIDALESHH 130 (244)
T ss_dssp --------------------TCCSSSEEEEECTTCCSSSCEEC-CCTT-CCHHHHHHHHHHHHHTCT
T ss_pred --------------------CCCccCEEEEEeCCCcCCCCeeE-ecCC-CCHHHHHHHHHHHHHhcc
Confidence 34445888999863 3333 4444 577889999999886543
No 196
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.10 E-value=2.8e-10 Score=105.53 Aligned_cols=97 Identities=18% Similarity=0.144 Sum_probs=76.6
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhh--cCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRD--RGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNG 141 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~--~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~ 141 (240)
.|+++||+|||+||++|+.+.|.+.++++++++ .++.++.|.+|. +...+++++++
T Consensus 29 ~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~---------d~~~~l~~~~~------------- 86 (519)
T 3t58_A 29 SSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAE---------ETNSAVCREFN------------- 86 (519)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTS---------GGGHHHHHHTT-------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCc---------cccHHHHHHcC-------------
Confidence 369999999999999999999999999999987 269999998751 11223333333
Q ss_pred CCCchHHHHHhhhcCCcccccccccceEEEEcC---CCCeEEeccCCCCccchHHHHHHhcccCC
Q psy299 142 DNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDK---NGVPVERHAANASPASLIPHIEILGRTSA 203 (240)
Q Consensus 142 ~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~---~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~ 203 (240)
|..+|+++++++ +|+++....+..+.+.|.+.|.++++...
T Consensus 87 ---------------------V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~ 130 (519)
T 3t58_A 87 ---------------------IAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHR 130 (519)
T ss_dssp ---------------------CCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCC
T ss_pred ---------------------CcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhcc
Confidence 445589999998 78888777777888889999999987654
No 197
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.07 E-value=4.1e-10 Score=86.97 Aligned_cols=89 Identities=11% Similarity=0.023 Sum_probs=61.1
Q ss_pred cEEEEEEecCC--CCCcHHHHHHHHHHHHHHhhcCcE--EEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCC
Q psy299 66 HVLVIVNVASR--CGYTGKHYKELVELDEKFRDRGLR--ILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNG 141 (240)
Q Consensus 66 k~vlv~F~atw--Cp~C~~~~~~L~~l~~~~~~~~v~--vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~ 141 (240)
+.+||+||++| |++|+...|.|.++.++| + ++. ++.|.+| ...+.++++
T Consensus 35 ~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d-----------~~~~la~~~-------------- 87 (142)
T 2es7_A 35 GDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLE-----------QSEAIGDRF-------------- 87 (142)
T ss_dssp CSEEEEECCCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHH-----------HHHHHHHTT--------------
T ss_pred CCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECC-----------CCHHHHHhc--------------
Confidence 45778898887 999999999999999999 4 477 8888543 233333333
Q ss_pred CCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccC
Q psy299 142 DNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 142 ~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
+|..+|+++++ ++|+++.++.|..+.+.|.+.|+++++.+
T Consensus 88 --------------------~V~~iPT~~~f-k~G~~v~~~~G~~~~~~l~~~i~~~l~~~ 127 (142)
T 2es7_A 88 --------------------NVRRFPATLVF-TDGKLRGALSGIHPWAELLTLMRSIVDTP 127 (142)
T ss_dssp --------------------TCCSSSEEEEE-SCC----CEESCCCHHHHHHHHHHHHC--
T ss_pred --------------------CCCcCCeEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhccc
Confidence 34455898999 99999999988888888999999998764
No 198
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.03 E-value=1.6e-09 Score=90.83 Aligned_cols=90 Identities=12% Similarity=0.068 Sum_probs=67.0
Q ss_pred CCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhh---cCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeee
Q psy299 62 TYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRD---RGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKIN 138 (240)
Q Consensus 62 ~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~---~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d 138 (240)
+++|+++++.||++|||+|+...|.++++..+++. .++.+..|.++ ..+ ..++++
T Consensus 135 ~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~-------~~~----~~~~~~----------- 192 (243)
T 2hls_A 135 SLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAY-------ENP----DIADKY----------- 192 (243)
T ss_dssp HCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETT-------TCH----HHHHHT-----------
T ss_pred HcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECc-------cCH----HHHHHc-----------
Confidence 36788999999999999999999999999999852 46888888655 111 122222
Q ss_pred cCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhccc
Q psy299 139 VNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 139 ~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
++..+|++++ +|+++ +.|..+.++|.+.|++.+..
T Consensus 193 -----------------------~V~~vPt~~i---~G~~~--~~G~~~~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 193 -----------------------GVMSVPSIAI---NGYLV--FVGVPYEEDFLDYVKSAAEG 227 (243)
T ss_dssp -----------------------TCCSSSEEEE---TTEEE--EESCCCHHHHHHHHHHHHTT
T ss_pred -----------------------CCeeeCeEEE---CCEEE--EeCCCCHHHHHHHHHHHhhc
Confidence 3444588777 78876 66667778899999988865
No 199
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.01 E-value=1.2e-09 Score=94.45 Aligned_cols=119 Identities=10% Similarity=0.060 Sum_probs=80.6
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.++++||.||++||++|+...|.+.++.+++++. +.++.|.+|. + ...+++++++
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~-------~--~~~~l~~~~~--------------- 88 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDL-------N--KNKALCAKYD--------------- 88 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTS-------T--TTHHHHHHTT---------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccC-------c--cCHHHHHhCC---------------
Confidence 4789999999999999999999999999999875 8899998872 0 1133344444
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCC----------------CeEEeccCCCCccchHHHHHHhcccC--CC-
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNG----------------VPVERHAANASPASLIPHIEILGRTS--AI- 204 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G----------------~Iv~~~~~~~~~~~l~~~L~~ll~~~--~i- 204 (240)
+...|++++++..+ .....+.|..+.+.|.+.+.+.+... .|
T Consensus 89 -------------------I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~ 149 (298)
T 3ed3_A 89 -------------------VNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFV 149 (298)
T ss_dssp -------------------CCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECS
T ss_pred -------------------CCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcC
Confidence 33447777776533 13567777778888999888877543 22
Q ss_pred -CcceeEEEEcCCCCeeeeccCC
Q psy299 205 -KWNFTKFIVDKNGAPVERHAAN 226 (240)
Q Consensus 205 -~~~~~~~~i~~~~~~~~~~~~~ 226 (240)
..+++.|+=+.+...|--|..+
T Consensus 150 ~~~~l~~~l~~~~~~~vi~fs~~ 172 (298)
T 3ed3_A 150 RIDTLGSLLRKSPKLSVVLFSKQ 172 (298)
T ss_dssp CGGGHHHHHTSCSSEEEEEEESS
T ss_pred CHHHHHHHHhcCCceEEEEEcCC
Confidence 2345555544334444445444
No 200
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.00 E-value=1.6e-09 Score=96.45 Aligned_cols=119 Identities=13% Similarity=0.150 Sum_probs=81.5
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhh-----cCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeee
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRD-----RGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKIN 138 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~-----~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d 138 (240)
.++++||.||++||++|+...|.+.++.+++++ .++.++.|.++. . .+.++++++
T Consensus 21 ~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~-------~----~~l~~~~~v--------- 80 (382)
T 2r2j_A 21 NADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQ-------H----SDIAQRYRI--------- 80 (382)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTT-------C----HHHHHHTTC---------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCc-------c----HHHHHhcCC---------
Confidence 478999999999999999999999999999963 248888898761 2 234444443
Q ss_pred cCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEE-eccCCCCccchHHHHHHhcccCC--C--CcceeEEEE
Q psy299 139 VNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVE-RHAANASPASLIPHIEILGRTSA--I--KWNFTKFIV 213 (240)
Q Consensus 139 ~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~-~~~~~~~~~~l~~~L~~ll~~~~--i--~~~~~~~~i 213 (240)
...|+.+++ ++|+++. .+.|..+.+.|.+.|.+.+...- + .-+|.. +.
T Consensus 81 -------------------------~~~Pt~~~f-~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~ 133 (382)
T 2r2j_A 81 -------------------------SKYPTLKLF-RNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LD 133 (382)
T ss_dssp -------------------------CEESEEEEE-ETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC-----------
T ss_pred -------------------------CcCCEEEEE-eCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hc
Confidence 334776655 6898887 47787788889999999885542 2 125666 55
Q ss_pred cCCCCeeeeccCCCCc
Q psy299 214 DKNGAPVERHAANASP 229 (240)
Q Consensus 214 ~~~~~~~~~~~~~~~~ 229 (240)
+.+..+|..|.....|
T Consensus 134 ~~~~~~v~ff~~~~~~ 149 (382)
T 2r2j_A 134 RSKRNIIGYFEQKDSD 149 (382)
T ss_dssp --CCEEEEEESCSSSH
T ss_pred CCCCEEEEEECCCCCh
Confidence 5555677778776666
No 201
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.96 E-value=2.1e-10 Score=85.78 Aligned_cols=47 Identities=11% Similarity=0.073 Sum_probs=41.0
Q ss_pred CCCCCCcEEEEEEecC-------CCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 60 LSTYKGHVLVIVNVAS-------RCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 60 ls~~~gk~vlv~F~at-------wCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
+.+.+|++++|.||++ |||+|+...|.|.++.+++++ ++.++.|.++
T Consensus 19 ~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~ 72 (123)
T 1wou_A 19 VEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVG 72 (123)
T ss_dssp HHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECC
T ss_pred HHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECC
Confidence 3444689999999999 999999999999999998875 5899999875
No 202
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.95 E-value=2.2e-09 Score=98.05 Aligned_cols=93 Identities=14% Similarity=0.111 Sum_probs=72.8
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhc-CcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDR-GLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGD 142 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~-~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~ 142 (240)
.||++||.|||+||++|+.+.|.+.++.+.+++. ++.++.|.++.. .+.
T Consensus 369 ~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~----------------------~~~-------- 418 (481)
T 3f8u_A 369 ENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN----------------------DVP-------- 418 (481)
T ss_dssp TTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS----------------------CCC--------
T ss_pred CCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch----------------------hhH--------
Confidence 4899999999999999999999999999999875 688888865410 000
Q ss_pred CCchHHHHHhhhcCCcccccccccceEEEEcCCCCe-EEeccCCCCccchHHHHHHhcccC
Q psy299 143 NAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVP-VERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 143 ~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~I-v~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
. ...+..+|++++++++|++ +.++.|..+.+.|.+.|++.+...
T Consensus 419 --~--------------~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~~~ 463 (481)
T 3f8u_A 419 --S--------------PYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREATNP 463 (481)
T ss_dssp --T--------------TCCCCSSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHCSSC
T ss_pred --h--------------hCCCcccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhcCCc
Confidence 0 0145667999999988875 567777788888999999887653
No 203
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=98.95 E-value=1.8e-09 Score=80.77 Aligned_cols=41 Identities=17% Similarity=0.033 Sum_probs=37.1
Q ss_pred CcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 65 GHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 65 gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
+++++|+||++||++|+...|.|.++.++|. ++.++-|.+|
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d 63 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVN 63 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGG
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhH
Confidence 5699999999999999999999999999986 4889988765
No 204
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.93 E-value=3.3e-09 Score=93.23 Aligned_cols=117 Identities=13% Similarity=0.111 Sum_probs=83.0
Q ss_pred CCcEEEEEEecCCCCCcHHHHHH-------HHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEe
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKE-------LVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEK 136 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~-------L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~ 136 (240)
.++++||.|||+||+ |+...|. +.++.+.+++.++.++.|.+| ... +.+++++
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~-------~~~----~l~~~~~-------- 86 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAK-------KEA----KLAKKLG-------- 86 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETT-------TTH----HHHHHHT--------
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCC-------CCH----HHHHhcC--------
Confidence 478999999999999 9888888 888898888777999999876 122 2333333
Q ss_pred eecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccC--CCC--cceeEEE
Q psy299 137 INVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTS--AIK--WNFTKFI 212 (240)
Q Consensus 137 ~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~--~i~--~~~~~~~ 212 (240)
+...|+.+++ ++|+ +..+.|..+.+.|.+.|++.+... .+. -+|..|+
T Consensus 87 --------------------------v~~~Pt~~~~-~~g~-~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~ 138 (350)
T 1sji_A 87 --------------------------FDEEGSLYVL-KGDR-TIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFE 138 (350)
T ss_dssp --------------------------CCSTTEEEEE-ETTE-EEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHH
T ss_pred --------------------------CCccceEEEE-ECCc-EEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHh
Confidence 4445887888 7788 456777778888999998887643 221 2566665
Q ss_pred E-cCCCCeeeeccCCCC
Q psy299 213 V-DKNGAPVERHAANAS 228 (240)
Q Consensus 213 i-~~~~~~~~~~~~~~~ 228 (240)
- +.+-.+|..|.+.-.
T Consensus 139 ~~~~~~~vv~ff~~~~~ 155 (350)
T 1sji_A 139 RIEDQIKLIGFFKSEES 155 (350)
T ss_dssp HCCSSCEEEEECSCTTS
T ss_pred ccCCCcEEEEEECCCCc
Confidence 3 455556666766433
No 205
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.92 E-value=5.8e-09 Score=86.02 Aligned_cols=90 Identities=12% Similarity=0.181 Sum_probs=68.2
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhc--CcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDR--GLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNG 141 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~--~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~ 141 (240)
.+++++|.||++||++|+...|.+.++.+++.++ ++.++.|.++ .+. +++++++
T Consensus 146 ~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~-------~~~----~l~~~~~------------- 201 (241)
T 3idv_A 146 DADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDAT-------AET----DLAKRFD------------- 201 (241)
T ss_dssp HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETT-------TCH----HHHHHTT-------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECC-------CCH----HHHHHcC-------------
Confidence 4689999999999999999999999999999875 3888888765 122 2333333
Q ss_pred CCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcc
Q psy299 142 DNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 142 ~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
+...|++++++ +|+.+. +.+..+.+.|.+.|.+.+.
T Consensus 202 ---------------------v~~~Pt~~~~~-~g~~~~-~~g~~~~~~l~~~l~~~~~ 237 (241)
T 3idv_A 202 ---------------------VSGYPTLKIFR-KGRPYD-YNGPREKYGIVDYMIEQSG 237 (241)
T ss_dssp ---------------------CCSSSEEEEEE-TTEEEE-CCSCCSHHHHHHHHHHHTT
T ss_pred ---------------------CcccCEEEEEE-CCeEEE-ecCCCCHHHHHHHHHhhhC
Confidence 33447777775 587776 6777778888888887764
No 206
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.91 E-value=6.8e-09 Score=70.45 Aligned_cols=36 Identities=11% Similarity=0.020 Sum_probs=31.4
Q ss_pred EEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEe
Q psy299 68 LVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAF 104 (240)
Q Consensus 68 vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~V 104 (240)
+.|.||++||++|+...|.++++.++++. ++.++.|
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v 37 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI-DAEFEKI 37 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC-CEEEEEE
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC-ceEEEEe
Confidence 46899999999999999999999998875 4777777
No 207
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.90 E-value=7.4e-10 Score=82.60 Aligned_cols=95 Identities=11% Similarity=0.088 Sum_probs=64.6
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHh-hcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFR-DRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGD 142 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~-~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~ 142 (240)
+...+||+||++||++|+..-+.+...++... .+.+.++-|.+|.. .+ ..+
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~------~~-----------~~l----------- 68 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDP------LP-----------PGL----------- 68 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSC------CC-----------TTC-----------
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCC------Cc-----------hhH-----------
Confidence 45789999999999999988765554433211 11366777766510 00 000
Q ss_pred CCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccC
Q psy299 143 NAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 143 ~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
+. ...+..+|++++++ +|+.+.+..|..+.+.+...|++++..-
T Consensus 69 -a~--------------~~~V~g~PT~i~f~-~G~ev~Ri~G~~~~~~f~~~L~~~l~~~ 112 (116)
T 3dml_A 69 -EL--------------ARPVTFTPTFVLMA-GDVESGRLEGYPGEDFFWPMLARLIGQA 112 (116)
T ss_dssp -BC--------------SSCCCSSSEEEEEE-TTEEEEEEECCCCHHHHHHHHHHHHHHH
T ss_pred -HH--------------HCCCCCCCEEEEEE-CCEEEeeecCCCCHHHHHHHHHHHHhhc
Confidence 00 11566779999998 9999999999999999999999887653
No 208
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.90 E-value=5.8e-09 Score=87.67 Aligned_cols=42 Identities=10% Similarity=0.053 Sum_probs=37.9
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
+|+++||+||++||++|+...|.|.+++++|. ++.|+.|.++
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d 173 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYP--MVKFCKIKAS 173 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHH
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCC
Confidence 58999999999999999999999999999987 4889888643
No 209
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.89 E-value=1.8e-09 Score=85.38 Aligned_cols=136 Identities=10% Similarity=0.105 Sum_probs=83.0
Q ss_pred CCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCC--------------------------
Q psy299 55 GEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQ-------------------------- 108 (240)
Q Consensus 55 G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~-------------------------- 108 (240)
+..+.+.+..++++|+.||..|||+|....|.|.++.+++++.++.+..+.+..
T Consensus 12 ~~~~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~l 91 (175)
T 3gyk_A 12 PNAPVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPNVRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWAL 91 (175)
T ss_dssp TTSCEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHH
T ss_pred CCCCCcCCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHH
Confidence 445566777899999999999999999999999999998775334444443320
Q ss_pred CCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCc
Q psy299 109 FGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASP 188 (240)
Q Consensus 109 ~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~ 188 (240)
+..+...+.+.+.+++++.|++...+.. ... .......+..........++.++|++++ +|+ ...|..+.
T Consensus 92 f~~~~~~~~~~l~~~a~~~Gld~~~~~~-~~~---~~~~~~~v~~~~~~a~~~gv~gtPt~~i---~g~---~~~G~~~~ 161 (175)
T 3gyk_A 92 MGMSGKANETGVLRIAREVGLDTEQLQR-DME---APEVTAHIAQSMALAQKLGFNGTPSFVV---EDA---LVPGFVEQ 161 (175)
T ss_dssp HTCSSCCSHHHHHHHHHHTTCCHHHHHH-HTT---CHHHHHHHHHHHHHHHHHTCCSSSEEEE---TTE---EECSCCCH
T ss_pred HhcCCCCCHHHHHHHHHHcCCCHHHHHH-HHh---ChHHHHHHHHHHHHHHHcCCccCCEEEE---CCE---EeeCCCCH
Confidence 0111234677888888888876643311 000 0111111111111111126778898665 454 34466777
Q ss_pred cchHHHHHHhcc
Q psy299 189 ASLIPHIEILGR 200 (240)
Q Consensus 189 ~~l~~~L~~ll~ 200 (240)
+.|.+.|+++++
T Consensus 162 ~~l~~~i~~~l~ 173 (175)
T 3gyk_A 162 SQLQDAVDRARK 173 (175)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 889999988774
No 210
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.88 E-value=5.4e-09 Score=96.06 Aligned_cols=92 Identities=13% Similarity=0.177 Sum_probs=72.6
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.++++||.||++||++|+...|.+.++.+.+++.++.++.|.++. . ..++++++
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~-------~----~~l~~~~~--------------- 83 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTE-------N----QDLCMEHN--------------- 83 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTT-------C----HHHHHHTT---------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCC-------C----HHHHHhcC---------------
Confidence 478999999999999999999999999999998779999998762 2 23444444
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCe--EEeccCCCCccchHHHHHHhccc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVP--VERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~I--v~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
+...|+.+++ ++|+. +..+.|..+.+.|.+.|.+.+..
T Consensus 84 -------------------v~~~Pt~~~~-~~g~~~~~~~~~G~~~~~~l~~~l~~~~~~ 123 (504)
T 2b5e_A 84 -------------------IPGFPSLKIF-KNSDVNNSIDYEGPRTAEAIVQFMIKQSQP 123 (504)
T ss_dssp -------------------CCSSSEEEEE-ETTCTTCEEECCSCCSHHHHHHHHHHHTSC
T ss_pred -------------------CCcCCEEEEE-eCCccccceeecCCCCHHHHHHHHHHhcCC
Confidence 3344777777 45776 77888878888899999887754
No 211
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.87 E-value=2.6e-09 Score=88.22 Aligned_cols=41 Identities=10% Similarity=0.022 Sum_probs=36.9
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeec
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPC 106 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~ 106 (240)
+|+++||.||++||++|+...|.|.++.++|. ++.|+.|.+
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~ 159 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRA 159 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEH
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEEC
Confidence 56999999999999999999999999999985 588888853
No 212
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.85 E-value=6.2e-09 Score=91.50 Aligned_cols=89 Identities=12% Similarity=0.085 Sum_probs=66.8
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhc-CcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDR-GLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGD 142 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~-~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~ 142 (240)
.++++||.||++||++|+...|.+.++.++++++ ++.++.|.++. . . +++
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~------~-~------~~~---------------- 316 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTA------N-E------VEA---------------- 316 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTT------C-B------CSS----------------
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCc------c-c------hhh----------------
Confidence 5899999999999999999999999999999876 57777776541 0 0 000
Q ss_pred CCchHHHHHhhhcCCcccccccccceEEEEcCC-CCeEEeccCCCCccchHHHHHHhc
Q psy299 143 NAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKN-GVPVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 143 ~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~-G~Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
.++...|+.++++++ |+.+.++.|..+.+.|.+.|++..
T Consensus 317 ------------------~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~ 356 (361)
T 3uem_A 317 ------------------VKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGG 356 (361)
T ss_dssp ------------------CCCCSSSEEEEECSSSSCCCEECCSCSSHHHHHHHHTTTS
T ss_pred ------------------cCCcccCeEEEEECCCCcceeEecCCCCHHHHHHHHHhcC
Confidence 045566999999665 677778887777777777776543
No 213
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.84 E-value=6.8e-09 Score=94.76 Aligned_cols=92 Identities=12% Similarity=0.198 Sum_probs=72.8
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.|+++||.||++||++|+...|.+.++.+.+++. +.++.|.++. . .+.++++++
T Consensus 20 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~-------~----~~l~~~~~v-------------- 73 (481)
T 3f8u_A 20 SAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTA-------N----TNTCNKYGV-------------- 73 (481)
T ss_dssp SSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTT-------C----HHHHHHTTC--------------
T ss_pred CCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCC-------C----HHHHHhcCC--------------
Confidence 4599999999999999999999999999999986 8889998761 2 233444443
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccC
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
...|+.+++ ++|+++..+.|..+.+.|.+.|.+.+.-.
T Consensus 74 --------------------~~~Ptl~~~-~~g~~~~~~~G~~~~~~l~~~~~~~~~~~ 111 (481)
T 3f8u_A 74 --------------------SGYPTLKIF-RDGEEAGAYDGPRTADGIVSHLKKQAGPA 111 (481)
T ss_dssp --------------------CEESEEEEE-ETTEEEEECCSCSSHHHHHHHHHHHTSCS
T ss_pred --------------------CCCCEEEEE-eCCceeeeecCccCHHHHHHHHHhhcccC
Confidence 334765666 88988888888888888999999887543
No 214
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.84 E-value=1.1e-10 Score=85.61 Aligned_cols=40 Identities=10% Similarity=-0.068 Sum_probs=33.5
Q ss_pred CcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHh
Q psy299 56 EDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFR 95 (240)
Q Consensus 56 ~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~ 95 (240)
..++|++..||+++|.||++|||+|+...|.+.++.++++
T Consensus 3 ~~~~la~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~ 42 (106)
T 3kp8_A 3 LAVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP 42 (106)
T ss_dssp HHHHHHHHHHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC
T ss_pred HhhHHHHhcCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC
Confidence 3456677778999999999999999999999998876553
No 215
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.83 E-value=9.2e-09 Score=84.61 Aligned_cols=87 Identities=10% Similarity=0.063 Sum_probs=63.5
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.++++++.||++||++|+...|.++++..++. ++.++.|.+|. .. +.++++
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~~-------~~----~l~~~~---------------- 185 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAND--YITSKVIDASE-------NQ----DLAEQF---------------- 185 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGGG-------CH----HHHHHT----------------
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHCC--CeEEEEEECCC-------CH----HHHHHc----------------
Confidence 45566899999999999999999999999983 58888887651 11 122222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhccc
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
++..+|++++ +|+ +.++.|..+.+.|.+.|+++++.
T Consensus 186 ------------------~v~~~Pt~~~---~G~-~~~~~G~~~~~~l~~~l~~~~~~ 221 (229)
T 2ywm_A 186 ------------------QVVGVPKIVI---NKG-VAEFVGAQPENAFLGYIMAVYEK 221 (229)
T ss_dssp ------------------TCCSSSEEEE---GGG-TEEEESCCCHHHHHHHHHHHHHH
T ss_pred ------------------CCcccCEEEE---CCE-EEEeeCCCCHHHHHHHHHHHhhh
Confidence 3444578776 787 45577777777888888887743
No 216
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.81 E-value=5.2e-09 Score=96.19 Aligned_cols=90 Identities=17% Similarity=0.130 Sum_probs=67.6
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHh-h-cCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFR-D-RGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNG 141 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~-~-~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~ 141 (240)
.+|++||.||++||++|+...|.+.++.++++ . .++.++.|..+. .+..
T Consensus 375 ~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~----------------------~~~~------- 425 (504)
T 2b5e_A 375 PKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTE----------------------NDVR------- 425 (504)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGG----------------------CCCS-------
T ss_pred CCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCc----------------------cccc-------
Confidence 48999999999999999999999999999998 3 257777775430 0000
Q ss_pred CCCchHHHHHhhhcCCcccccccccceEEEEcCCCCe--EEeccCCCCccchHHHHHHhccc
Q psy299 142 DNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVP--VERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 142 ~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~I--v~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
. ..+...|+++++ ++|+. +.++.|..+.+.|.+.|++.+..
T Consensus 426 ---~---------------~~v~~~Pt~~~~-~~G~~~~~~~~~G~~~~~~l~~~i~~~~~~ 468 (504)
T 2b5e_A 426 ---G---------------VVIEGYPTIVLY-PGGKKSESVVYQGSRSLDSLFDFIKENGHF 468 (504)
T ss_dssp ---S---------------CCCSSSSEEEEE-CCTTSCCCCBCCSCCCHHHHHHHHHHHCTT
T ss_pred ---c---------------CCceecCeEEEE-eCCceecceEecCCCCHHHHHHHHHhcCCC
Confidence 0 045667888887 78876 66777777888899999887654
No 217
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.81 E-value=1.1e-08 Score=98.86 Aligned_cols=119 Identities=13% Similarity=0.124 Sum_probs=86.9
Q ss_pred CCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeec
Q psy299 60 LSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINV 139 (240)
Q Consensus 60 ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~ 139 (240)
+.++.|++++|.||++||++|+..+|.++++++++++ ++.++.|.+| +..+ .++.++
T Consensus 450 ~~~~~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~-------~~~~----~~~~~~----------- 506 (780)
T 3apo_A 450 FPASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYG-QLKVGTLDCT-------IHEG----LCNMYN----------- 506 (780)
T ss_dssp SCTTCCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETT-------TCHH----HHHHTT-----------
T ss_pred HHHcCCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCC-------CCHH----HHHHcC-----------
Confidence 4455899999999999999999999999999999986 4999999876 1222 233333
Q ss_pred CCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccC--CC-CcceeEEEEcCC
Q psy299 140 NGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTS--AI-KWNFTKFIVDKN 216 (240)
Q Consensus 140 ~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~--~i-~~~~~~~~i~~~ 216 (240)
+...|+++++ ++|++ ..+.+..+.+.|.+.++++++.. .+ .-+|.+++.+++
T Consensus 507 -----------------------v~~~Pt~~~~-~~g~~-~~~~g~~~~~~l~~fi~~~~~~~v~~l~~~~f~~~v~~~~ 561 (780)
T 3apo_A 507 -----------------------IQAYPTTVVF-NQSSI-HEYEGHHSAEQILEFIEDLRNPSVVSLTPSTFNELVKQRK 561 (780)
T ss_dssp -----------------------CCSSSEEEEE-ETTEE-EEECSCSCHHHHHHHHHHHHSCSEEECCHHHHHHHTTTCC
T ss_pred -----------------------CCcCCeEEEE-cCCce-eeecCcccHHHHHHHHHhhcccceeecCcccHHHHhhccC
Confidence 3334888888 45776 66677778888999999988743 11 237888777643
Q ss_pred -CC--eeeeccCC
Q psy299 217 -GA--PVERHAAN 226 (240)
Q Consensus 217 -~~--~~~~~~~~ 226 (240)
+. +|.-|++.
T Consensus 562 ~~~~~lv~F~ap~ 574 (780)
T 3apo_A 562 HDEVWMVDFYSPW 574 (780)
T ss_dssp TTCCEEEEEECTT
T ss_pred CCCeEEEEEECCC
Confidence 33 67777764
No 218
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.79 E-value=1e-08 Score=75.75 Aligned_cols=85 Identities=16% Similarity=0.210 Sum_probs=59.9
Q ss_pred CcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCCC
Q psy299 65 GHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDNA 144 (240)
Q Consensus 65 gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~ 144 (240)
+++++|+|+++|||+|++..|.++++.+. .++.++-|.+| ..++.-.+.+.+++
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~---~~v~~~~vdVd-------e~r~~Sn~IA~~~~---------------- 77 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE---RDMDGYYLIVQ-------QERDLSDYIAKKTN---------------- 77 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH---HTCCEEEEEGG-------GGHHHHHHHHHHHT----------------
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc---CCceEEEEEee-------cCchhhHHHHHHhC----------------
Confidence 78999999999999999999999999884 35888888766 22222223333333
Q ss_pred chHHHHHhhhcCCcccccccc-cceEEEEcCCCCeEEec-cCCCCccchHHH
Q psy299 145 HPLWKFLKHKQGGTLVDAIKW-NFTKFIVDKNGVPVERH-AANASPASLIPH 194 (240)
Q Consensus 145 ~~l~~~~~~~~~~~~~~~v~~-~P~~~lID~~G~Iv~~~-~~~~~~~~l~~~ 194 (240)
|++ .|+++++ ++|+++++. .+..+.+.|.+.
T Consensus 78 ------------------V~h~sPq~il~-k~G~~v~~~SH~~I~~~~l~~~ 110 (112)
T 3iv4_A 78 ------------------VKHESPQAFYF-VNGEMVWNRDHGDINVSSLAQA 110 (112)
T ss_dssp ------------------CCCCSSEEEEE-ETTEEEEEEEGGGCSHHHHHHH
T ss_pred ------------------CccCCCeEEEE-ECCEEEEEeeccccCHHHHHHh
Confidence 442 4787777 999999874 445555555544
No 219
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.79 E-value=2e-08 Score=78.48 Aligned_cols=93 Identities=8% Similarity=-0.035 Sum_probs=64.8
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHH---HHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKEL---VELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVN 140 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L---~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~ 140 (240)
.||++||+|++.||+.|+..-..+ .++.+.+.+ ++.++.+..| +. +-.++.+.+++
T Consensus 41 ~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~-~fv~v~~d~~--------~~-~~~~l~~~y~v----------- 99 (153)
T 2dlx_A 41 QNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE-HFIFWQVYHD--------SE-EGQRYIQFYKL----------- 99 (153)
T ss_dssp HTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH-TEEEEEEESS--------SH-HHHHHHHHHTC-----------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc-CeEEEEEecC--------CH-hHHHHHHHcCC-----------
Confidence 489999999999999999875444 344444443 5777776544 22 23445544443
Q ss_pred CCCCchHHHHHhhhcCCcccccccccceEEEEcCC-CCeEEeccCCCCccchHHHHHHhccc
Q psy299 141 GDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKN-GVPVERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 141 ~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~-G~Iv~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
...|+.+++|++ |+.+....+ .+++++.+.|++++..
T Consensus 100 -----------------------~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~~l~~ 137 (153)
T 2dlx_A 100 -----------------------GDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTGFLGE 137 (153)
T ss_dssp -----------------------CSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHHHHHH
T ss_pred -----------------------CCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHHHHHh
Confidence 234888999998 877776655 7888899999988754
No 220
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.78 E-value=1.8e-08 Score=91.99 Aligned_cols=45 Identities=9% Similarity=0.104 Sum_probs=39.7
Q ss_pred CCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhc-------CcEEEEeecC
Q psy299 63 YKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDR-------GLRILAFPCN 107 (240)
Q Consensus 63 ~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~-------~v~vi~Vs~D 107 (240)
..+|++||+|||+||++|+.+.|.+.++.+++++. .+.++.|.+|
T Consensus 40 ~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d 91 (470)
T 3qcp_A 40 APLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCA 91 (470)
T ss_dssp GGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETT
T ss_pred CCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECC
Confidence 34589999999999999999999999999999743 2899999876
No 221
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.75 E-value=1.6e-08 Score=81.33 Aligned_cols=131 Identities=10% Similarity=0.046 Sum_probs=79.5
Q ss_pred CCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCC-------------------------------C
Q psy299 63 YKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFG-------------------------------G 111 (240)
Q Consensus 63 ~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~-------------------------------~ 111 (240)
..|+++|+.||..|||+|....|.|.++.+++.+ ++.+..+.++... +
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~~~~~s~~aa~a~~aa~~~g~~~~~~~lf~~~~~~~ 101 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIAFNAGMKPLQQLYYTLQALERPDLHPKVFTAIHTER 101 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECCSSGGGHHHHHHHHHHHHTTCTTHHHHHHHHHHTSC
T ss_pred CCCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecccCcchHHHHHHHHHHHhcCHHHHHHHHHHHHHHhc
Confidence 3589999999999999999999999999999887 5888888775210 1
Q ss_pred CCCCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCc-cc
Q psy299 112 QEPGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASP-AS 190 (240)
Q Consensus 112 ~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~-~~ 190 (240)
..-.+.+.+.+++++.|++..-+.. .... ......+..........++.++|++++ +|+.+.......+. +.
T Consensus 102 ~~~~~~~~l~~~a~~~Gld~~~~~~-~~~s---~~~~~~v~~~~~~a~~~gv~gtPt~vi---ng~~~~~g~~~~~~~e~ 174 (195)
T 3hd5_A 102 KRLFDKKAMGEWAASQGVDRAKFDS-VFDS---FSVQTQVQRASQLAEAAHIDGTPAFAV---GGRYMTSPVLAGNDYAG 174 (195)
T ss_dssp CCCCSHHHHHHHHHHTTCCHHHHHH-HHTC---HHHHHHHHHHHHHHHHTTCCSSSEEEE---TTTEEECTTTTTGGGTT
T ss_pred cCCCCHHHHHHHHHHhCCCHHHHHH-HHcC---HHHHHHHHHHHHHHHHhCCCcCceEEE---CCEEEeCccccCChHHH
Confidence 1113566677777776665422200 0000 011111111111111226778899765 67765444333445 77
Q ss_pred hHHHHHHhccc
Q psy299 191 LIPHIEILGRT 201 (240)
Q Consensus 191 l~~~L~~ll~~ 201 (240)
+.+.|+.|++.
T Consensus 175 ~~~~i~~L~~~ 185 (195)
T 3hd5_A 175 ALKVVDQLIVQ 185 (195)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888888754
No 222
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.73 E-value=9.8e-09 Score=99.16 Aligned_cols=92 Identities=13% Similarity=-0.002 Sum_probs=70.2
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.|+++||.||++||++|+...|.+.++.+++++ ++.++.|.+|. .. ..++++
T Consensus 674 ~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~-~~~~~~vd~~~-------~~----~~~~~~---------------- 725 (780)
T 3apo_A 674 GKTHWVVDFYAPWSGPSQNFAPEFELLARMIKG-KVRAGKVDCQA-------YP----QTCQKA---------------- 725 (780)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTT-------CH----HHHHHT----------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CceEEEEECCC-------CH----HHHHhc----------------
Confidence 478999999999999999999999999999987 48999998761 22 122222
Q ss_pred CchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccC----CCCccchHHHHHHhcccC
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAA----NASPASLIPHIEILGRTS 202 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~----~~~~~~l~~~L~~ll~~~ 202 (240)
++..+|+++++ ++|+++.++.| ..+.+.|.+.|+++++..
T Consensus 726 ------------------~v~~~Pt~~~~-~~g~~~~~~~G~~~g~~~~~~l~~~l~~~l~~~ 769 (780)
T 3apo_A 726 ------------------GIKAYPSVKLY-QYERAKKSIWEEQINSRDAKTIAALIYGKLETL 769 (780)
T ss_dssp ------------------TCCSSSEEEEE-EEETTTTEEEEEEECCCCHHHHHHHHHHHTTC-
T ss_pred ------------------CCCcCCEEEEE-cCCCccccccCcccCCcCHHHHHHHHHHHHHHh
Confidence 34445888888 88888766654 357778999999998653
No 223
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.69 E-value=1.5e-08 Score=81.36 Aligned_cols=130 Identities=14% Similarity=0.140 Sum_probs=81.5
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCC--------------------------------C
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFG--------------------------------G 111 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~--------------------------------~ 111 (240)
.|+++|+.||..|||+|....|.|.++.+++.+ ++.+.-+.+.... +
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~~~~~~~~aa~a~~aa~~~g~~~~~~~~lf~~~~~~~ 102 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPALFGGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHKEH 102 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECCCSTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTSC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEEehhhccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhC
Confidence 689999999999999999999999999999887 5777766653110 1
Q ss_pred CCCCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccch
Q psy299 112 QEPGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASL 191 (240)
Q Consensus 112 ~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l 191 (240)
..-.+.+.+.+++++.|++-.-+.. .... ......+..........++.++|+++| +|+.+....+..+.+.|
T Consensus 103 ~~~~~~~~l~~~a~~~Gld~~~~~~-~~~~---~~~~~~v~~~~~~a~~~gv~gtPt~~v---ng~~~~~~~G~~~~e~l 175 (192)
T 3h93_A 103 KKLATPEEMADFLAGKGVDKEKFLS-TYNS---FAIKGQMEKAKKLAMAYQVTGVPTMVV---NGKYRFDIGSAGGPEET 175 (192)
T ss_dssp CCCCSHHHHHHHHHTTTCCHHHHHH-HHTC---HHHHHHHHHHHHHHHHHTCCSSSEEEE---TTTEEEEHHHHTSHHHH
T ss_pred cCCCCHHHHHHHHHHcCCCHHHHHH-HhhC---HHHHHHHHHHHHHHHHhCCCCCCeEEE---CCEEEecccccCCHHHH
Confidence 1224667777777777765422200 0000 111111111111111126788898655 67766554456677888
Q ss_pred HHHHHHhccc
Q psy299 192 IPHIEILGRT 201 (240)
Q Consensus 192 ~~~L~~ll~~ 201 (240)
.+.|+.+++.
T Consensus 176 ~~~i~~l~~k 185 (192)
T 3h93_A 176 LKLADYLIEK 185 (192)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888888754
No 224
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.61 E-value=2.8e-07 Score=81.55 Aligned_cols=119 Identities=13% Similarity=0.095 Sum_probs=81.4
Q ss_pred CCcEEEEEEecCCCCCcHHHH------HHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEee
Q psy299 64 KGHVLVIVNVASRCGYTGKHY------KELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKI 137 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~------~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~ 137 (240)
.++++||.|||+||++|...- |.+.++.+.+++.++.+..|.++. .. +.+++++
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~-------~~----~l~~~~~--------- 88 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEK-------DA----AVAKKLG--------- 88 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTT-------TH----HHHHHHT---------
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcc-------cH----HHHHHcC---------
Confidence 368999999999999984432 578888888887679999998761 22 2334334
Q ss_pred ecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccC--CCC--cceeEEEE
Q psy299 138 NVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTS--AIK--WNFTKFIV 213 (240)
Q Consensus 138 d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~--~i~--~~~~~~~i 213 (240)
|...|+.+++. +|+.+ .+.|..+.+.|.+.|++.+... .+. -+|.+|+-
T Consensus 89 -------------------------V~~~PTl~~f~-~G~~~-~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~ 141 (367)
T 3us3_A 89 -------------------------LTEEDSIYVFK-EDEVI-EYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFEN 141 (367)
T ss_dssp -------------------------CCSTTEEEEEE-TTEEE-ECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHH
T ss_pred -------------------------CCcCceEEEEE-CCcEE-EeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhc
Confidence 44447777774 68775 6777778888999998877543 232 35666654
Q ss_pred -cCCCCeeeeccCCCCc
Q psy299 214 -DKNGAPVERHAANASP 229 (240)
Q Consensus 214 -~~~~~~~~~~~~~~~~ 229 (240)
+.+-.+|-.|.+.-.+
T Consensus 142 ~~~~~~vv~ff~~~~~~ 158 (367)
T 3us3_A 142 IEDEIKLIGYFKNKDSE 158 (367)
T ss_dssp CCSSCEEEEECSCTTCH
T ss_pred cCCCcEEEEEECCCCch
Confidence 3455667777664433
No 225
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.55 E-value=5.8e-08 Score=79.73 Aligned_cols=44 Identities=14% Similarity=0.293 Sum_probs=35.0
Q ss_pred cCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeec
Q psy299 59 PLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPC 106 (240)
Q Consensus 59 ~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~ 106 (240)
.+....|+++|+.||++|||+|+...|.|+++.+. ++.++.+..
T Consensus 80 ~~g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----~v~v~~~~~ 123 (216)
T 1eej_A 80 VYKAPQEKHVITVFTDITCGYCHKLHEQMADYNAL----GITVRYLAF 123 (216)
T ss_dssp EECCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEEC
T ss_pred eecCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhC----CcEEEEEEC
Confidence 34455789999999999999999999999887652 577766543
No 226
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.54 E-value=6.6e-08 Score=73.19 Aligned_cols=91 Identities=8% Similarity=-0.028 Sum_probs=66.6
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDN 143 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~ 143 (240)
.+.+++|.||++ |++|++..|.|.++.++|+++ +.++-|..|. .+ +.++.+
T Consensus 22 ~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~-------~~----~~a~~~---------------- 72 (133)
T 2djk_A 22 AGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKA-------FG----AHAGNL---------------- 72 (133)
T ss_dssp TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTT-------TG----GGTTTT----------------
T ss_pred CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHH-------hH----HHHHHc----------------
Confidence 357899999999 899999999999999999875 8888887651 11 111222
Q ss_pred CchHHHHHhhhcCCcccccccc--cceEEEEcC-CCCeEEecc--CCCCccchHHHHHHhcccC
Q psy299 144 AHPLWKFLKHKQGGTLVDAIKW--NFTKFIVDK-NGVPVERHA--ANASPASLIPHIEILGRTS 202 (240)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~v~~--~P~~~lID~-~G~Iv~~~~--~~~~~~~l~~~L~~ll~~~ 202 (240)
+++. +|+.++++. +|+. +... +..+.+.|.+.|+.+++++
T Consensus 73 ------------------gi~~~~iPtl~i~~~~~g~~-~~~~~~g~~~~~~l~~fi~~~l~Gk 117 (133)
T 2djk_A 73 ------------------NLKTDKFPAFAIQEVAKNQK-FPFDQEKEITFEAIKAFVDDFVAGK 117 (133)
T ss_dssp ------------------TCCSSSSSEEEEECTTTCCB-CCCCSSSCCCHHHHHHHHHHHHHTC
T ss_pred ------------------CCCcccCCEEEEEecCcCcc-cCCCCccccCHHHHHHHHHHHHcCC
Confidence 2333 578788864 5776 4554 6677788999999998764
No 227
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.48 E-value=1.9e-07 Score=74.82 Aligned_cols=129 Identities=12% Similarity=-0.059 Sum_probs=79.2
Q ss_pred CCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCC--------------------------------C
Q psy299 63 YKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQF--------------------------------G 110 (240)
Q Consensus 63 ~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~--------------------------------~ 110 (240)
-.++++|+.||..|||+|....|.|.++.++++. ++.+..+.+... .
T Consensus 20 ~~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~~~~~s~~aa~a~~aa~~~~~~~~~~~~lf~~~~~~ 98 (195)
T 2znm_A 20 QSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHVVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQ 98 (195)
T ss_dssp SSSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEECCCSGGGHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred CCCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEeccccCcccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHh
Confidence 3579999999999999999999999999999876 477777765310 0
Q ss_pred CCCCCCHHHHHHHHHhc-CcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCcc
Q psy299 111 GQEPGDADQICEFTKKK-NVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPA 189 (240)
Q Consensus 111 ~~~~~~~e~~~~~~~~~-~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~ 189 (240)
+..-.+.+.+.+++++. |++.+.+... ... ......+..........++.++|+ |+|| |+.+ ..+..+.+
T Consensus 99 ~~~~~~~~~l~~~a~~~~Gld~~~~~~~-~~~---~~~~~~v~~~~~~a~~~gv~gtPt-~vin--g~~~--~~g~~~~~ 169 (195)
T 2znm_A 99 KIRLENRSVAGKWALSQKGFDGKKLMRA-YDS---PEAAAAALKMQKLTEQYRIDSTPT-VIVG--GKYR--VIFNNGFD 169 (195)
T ss_dssp SSCTTSHHHHHHHHHTCSSSCHHHHHHH-HTS---HHHHHHHHHHHHHHHHTTCCSSSE-EEET--TTEE--ECCCSHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCCHHHHHHH-hcC---HHHHHHHHHHHHHHHHcCCCCCCe-EEEC--CEEE--EcCCCCHH
Confidence 11123567788888887 8776433110 000 111111111111111226788899 5664 6643 23345667
Q ss_pred chHHHHHHhccc
Q psy299 190 SLIPHIEILGRT 201 (240)
Q Consensus 190 ~l~~~L~~ll~~ 201 (240)
.|.+.|+.+++.
T Consensus 170 ~l~~~i~~~l~~ 181 (195)
T 2znm_A 170 GGVHTIKELVAK 181 (195)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 788888887754
No 228
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.47 E-value=7.5e-07 Score=71.17 Aligned_cols=46 Identities=11% Similarity=0.086 Sum_probs=38.4
Q ss_pred CCCCcEEEEEEec-------CCCCCcHHHHHHHHHHHHHHhh----cCcEEEEeecC
Q psy299 62 TYKGHVLVIVNVA-------SRCGYTGKHYKELVELDEKFRD----RGLRILAFPCN 107 (240)
Q Consensus 62 ~~~gk~vlv~F~a-------twCp~C~~~~~~L~~l~~~~~~----~~v~vi~Vs~D 107 (240)
.-++.++||.||| .||++|++..|.+.++.++|.. .++.|.-|.+|
T Consensus 34 ~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d 90 (178)
T 3ga4_A 34 GVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVN 90 (178)
T ss_dssp CCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETT
T ss_pred ccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECc
Confidence 3456799999999 4999999999999999999972 24888888766
No 229
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.46 E-value=1.5e-07 Score=66.40 Aligned_cols=76 Identities=8% Similarity=0.054 Sum_probs=49.6
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHH
Q psy299 69 VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLW 148 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~ 148 (240)
|+.||++||++|+...|.|.++..++ +.-|.+| ++++ .++++++.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------~~~vdid-------~~~~----l~~~~g~~------------------ 47 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------FFSVFID-------DDAA----LESAYGLR------------------ 47 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------EEEEECT-------TCHH----HHHHHTTT------------------
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------eEEEECC-------CCHH----HHHHhCCC------------------
Confidence 78899999999999999887754332 4456555 2343 22333332
Q ss_pred HHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhccc
Q psy299 149 KFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 149 ~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
+|+.++ .+|+.+. +..+.+.|.+.|++.+..
T Consensus 48 -----------------vPtl~~--~~G~~v~---g~~~~~~L~~~l~~~~~~ 78 (87)
T 1ttz_A 48 -----------------VPVLRD--PMGRELD---WPFDAPRLRAWLDAAPHA 78 (87)
T ss_dssp -----------------CSEEEC--TTCCEEE---SCCCHHHHHHHHHTCC--
T ss_pred -----------------cCeEEE--ECCEEEe---CCCCHHHHHHHHHHHHHH
Confidence 355444 7788875 556777888888887755
No 230
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.45 E-value=1.9e-07 Score=68.37 Aligned_cols=38 Identities=13% Similarity=0.312 Sum_probs=27.7
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
+++++++ ||++|||+|+...|.|+++.. .+.++.|..+
T Consensus 18 ~~~~vv~-f~a~~C~~C~~~~~~l~~~~~-----~~~~v~v~~~ 55 (116)
T 2e7p_A 18 SSAPVVV-FSKTYCGYCNRVKQLLTQVGA-----SYKVVELDEL 55 (116)
T ss_dssp TSSSEEE-EECTTCHHHHHHHHHHHHHTC-----CCEEEEGGGS
T ss_pred cCCCEEE-EECCCChhHHHHHHHHHHcCC-----CeEEEEccCC
Confidence 3556666 999999999999999888643 2556665443
No 231
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.28 E-value=1.2e-06 Score=69.84 Aligned_cols=127 Identities=17% Similarity=0.151 Sum_probs=77.6
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCC--------------------------------C
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFG--------------------------------G 111 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~--------------------------------~ 111 (240)
.++++|+.||..+||+|....+.|.++.+++.. ++.+..+.+.... +
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~~~~~s~~a~~a~~~a~~~~~~~~~~~~lf~~~~~~~ 102 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPAVFGGVWDPFARAYLAADVLGVAKRSHTAMFEAIHEKG 102 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEECCCSTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCcccCCCcHHHHHHHHHHHHcCcHHHHHHHHHHHHHHhc
Confidence 688899999999999999999999999998875 4777666553100 0
Q ss_pred C---CCCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCc
Q psy299 112 Q---EPGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASP 188 (240)
Q Consensus 112 ~---~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~ 188 (240)
. ...+.+.+.+++++.|++.+-+..+ ... ......+..........++.++|+ |+|| |+.+. .+. +.
T Consensus 103 ~~~~~~~~~~~l~~~a~~~Gld~~~~~~~-~~~---~~~~~~v~~~~~~a~~~gv~gtPt-~vin--g~~~~--~g~-~~ 172 (193)
T 2rem_A 103 SVPIQNVGPDELAVFYAGYGVQPDRFVAT-FNG---PEVEKRFQAARAYALKVRPVGTPT-IVVN--GRYMV--TGH-DF 172 (193)
T ss_dssp CSCSTTCCHHHHHHHHHTTTCCHHHHHHH-HTS---HHHHHHHHHHHHHHHHHCCSSSSE-EEET--TTEEE--CCS-SH
T ss_pred ccCcCCCCHHHHHHHHHHcCCCHHHHHHH-HhC---hHHHHHHHHHHHHHHHhCCCCCCe-EEEC--CEEEe--cCC-CH
Confidence 0 2245777777877777765432100 000 111111111111111226888899 5664 65432 334 77
Q ss_pred cchHHHHHHhccc
Q psy299 189 ASLIPHIEILGRT 201 (240)
Q Consensus 189 ~~l~~~L~~ll~~ 201 (240)
+.|.+.|+.+++.
T Consensus 173 ~~l~~~i~~~~~~ 185 (193)
T 2rem_A 173 EDTLRITDYLVSR 185 (193)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7899999888754
No 232
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.28 E-value=2.4e-06 Score=69.62 Aligned_cols=93 Identities=18% Similarity=0.178 Sum_probs=63.0
Q ss_pred CCCCcEEEEEEecC-CCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecC
Q psy299 62 TYKGHVLVIVNVAS-RCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVN 140 (240)
Q Consensus 62 ~~~gk~vlv~F~at-wCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~ 140 (240)
+..+.++|+.||++ ||++|+...|.+.++.+. .+ ++.++.|.+| +++ ..+.++++++.
T Consensus 19 ~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~-~v~~~~vd~~--------~~~-~~~~~~~~~v~---------- 77 (226)
T 1a8l_A 19 KMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TD-KLSYEIVDFD--------TPE-GKELAKRYRID---------- 77 (226)
T ss_dssp GCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CT-TEEEEEEETT--------SHH-HHHHHHHTTCC----------
T ss_pred hcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CC-ceEEEEEeCC--------Ccc-cHHHHHHcCCC----------
Confidence 35567889999999 999999999999998754 33 5888888765 211 24455555542
Q ss_pred CCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeE-EeccCCCCccchHHHHHHhcc
Q psy299 141 GDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPV-ERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 141 ~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv-~~~~~~~~~~~l~~~L~~ll~ 200 (240)
..|+++++ ++|+.. .++.+....+.+...+..++.
T Consensus 78 ------------------------~~Pt~~~~-~~g~~~~~~~~G~~~~~~l~~~l~~~l~ 113 (226)
T 1a8l_A 78 ------------------------RAPATTIT-QDGKDFGVRYFGLPAGHEFAAFLEDIVD 113 (226)
T ss_dssp ------------------------SSSEEEEE-ETTBCCSEEEESCCCTTHHHHHHHHHHH
T ss_pred ------------------------cCceEEEE-cCCceeeEEEeccCcHHHHHHHHHHHHh
Confidence 33676666 556432 455565666667777777664
No 233
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.26 E-value=2e-06 Score=63.01 Aligned_cols=38 Identities=13% Similarity=0.130 Sum_probs=32.1
Q ss_pred EEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 67 VLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 67 ~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
..|+.||++|||+|....+.|.++.+++. +.+.-|.+|
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~---i~~~~vDId 67 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW---FELEVINID 67 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC---CCCEEEETT
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC---CeEEEEECC
Confidence 56899999999999999999999987753 677777665
No 234
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.20 E-value=5.6e-06 Score=67.72 Aligned_cols=92 Identities=16% Similarity=0.025 Sum_probs=63.7
Q ss_pred CCCcEEEEEE----ecCCCCCcHHHHHHHHHHHHHHhh-cCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEee
Q psy299 63 YKGHVLVIVN----VASRCGYTGKHYKELVELDEKFRD-RGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKI 137 (240)
Q Consensus 63 ~~gk~vlv~F----~atwCp~C~~~~~~L~~l~~~~~~-~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~ 137 (240)
..+.++|+.| |++||++|+..+|.+.++++++.+ .++.+..|.+| .+ .+.++++++
T Consensus 19 ~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~-------~~----~~l~~~~~v-------- 79 (229)
T 2ywm_A 19 FKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPF-------TH----KEETEKYGV-------- 79 (229)
T ss_dssp CCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTT-------TC----HHHHHHTTC--------
T ss_pred ccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCc-------cc----HHHHHHcCC--------
Confidence 3445566666 588999999999999999888843 25888888655 11 234444443
Q ss_pred ecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcc
Q psy299 138 NVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 138 d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
...|+.+++. +|+...++.|....+++...+..++.
T Consensus 80 --------------------------~~~Ptl~~~~-~~~~~~~~~G~~~~~~l~~~~~~~~~ 115 (229)
T 2ywm_A 80 --------------------------DRVPTIVIEG-DKDYGIRYIGLPAGLEFTTLINGIFH 115 (229)
T ss_dssp --------------------------CBSSEEEEES-SSCCCEEEESCCCTTHHHHHHHHHHH
T ss_pred --------------------------CcCcEEEEEC-CCcccceecCCccHHHHHHHHHHHHh
Confidence 3347777775 56666777777777778888887764
No 235
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.18 E-value=1.8e-06 Score=69.47 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=38.3
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
.++++|+.||..|||+|....|.|.++.+++.+ ++.+.-+.++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEecCC
Confidence 479999999999999999999999999999887 5888777765
No 236
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.17 E-value=3.3e-06 Score=70.41 Aligned_cols=135 Identities=10% Similarity=0.050 Sum_probs=68.5
Q ss_pred ccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHH---------HHHHhcC
Q psy299 58 VPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQIC---------EFTKKKN 128 (240)
Q Consensus 58 v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~---------~~~~~~~ 128 (240)
+.+..-.++++|+.|+..|||+|+...+.+.++.+. + ++.|+.+.+... + +++....+ +++..+.
T Consensus 90 i~~G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g-~v~v~~~~~p~~-~--~~s~~~a~a~~~a~d~~~~~~~~~ 163 (241)
T 1v58_A 90 LLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS--G-KVQLRTLLVGVI-K--PESPATAAAILASKDPAKTWQQYE 163 (241)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT--T-SEEEEEEECCCS-S--TTHHHHHHHHHHSSSHHHHHHHHH
T ss_pred ceECCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC--C-cEEEEEEECCcC-C--CcHHHHHHHHHHccCHHHHHHHHH
Confidence 334445678999999999999999999999887764 2 466655543211 1 12222221 1111111
Q ss_pred cceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcc
Q psy299 129 VQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 129 ~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
.-|..- ..+............+..........++..+|++++.|.+|++ .+..|..+.+.|.+.|++++.
T Consensus 164 ~~~~~~-~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~-~~~~G~~~~~~L~~~l~~~~~ 233 (241)
T 1v58_A 164 ASGGKL-KLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL-QQAVGLPDQKTLNIIMGNKLQ 233 (241)
T ss_dssp HTTTCC-CCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE-EEEESSCCHHHHHHHTTC---
T ss_pred HHhccC-CCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE-EEecCCCCHHHHHHHHHHHHH
Confidence 111000 0000000111111111111111111268888999999888975 455666677777777766543
No 237
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.11 E-value=2.6e-06 Score=61.32 Aligned_cols=38 Identities=5% Similarity=0.057 Sum_probs=30.0
Q ss_pred CcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 65 GHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 65 gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
..+.|+.||++|||+|+...+.|.++. .++.+.-|.+|
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~ 52 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYK-----DRFILQEVDIT 52 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTS-----SSSEEEEEETT
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhh-----hCCeEEEEECC
Confidence 467889999999999999888887643 24777777765
No 238
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=98.11 E-value=1.1e-05 Score=65.19 Aligned_cols=137 Identities=12% Similarity=0.075 Sum_probs=85.7
Q ss_pred ccccccccccccCCcccCC----eEeecCC---------CC--cccCCCC--CCcEEEEEEe-cCCCCCcHH-HHHHHHH
Q psy299 29 YDFTSMADDSWKNAETVYD----FTVKNIK---------GE--DVPLSTY--KGHVLVIVNV-ASRCGYTGK-HYKELVE 89 (240)
Q Consensus 29 ~~~~~~~~~~~~~g~~~p~----f~l~d~~---------G~--~v~ls~~--~gk~vlv~F~-atwCp~C~~-~~~~L~~ 89 (240)
.+......-...+|+++|. |+....+ |. ++++++. +||.+||++. +...|.|.. ++|.+.+
T Consensus 16 ~r~~~~~~~~~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~ 95 (199)
T 4h86_A 16 PRGSHMASMSDLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYIN 95 (199)
T ss_dssp CTTCCCCCBCTTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHH
T ss_pred cccchhhhhHHHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHH
Confidence 3334444445568999995 3333222 22 3555553 6887766654 788999987 5999988
Q ss_pred HHHHH-hhcCc-EEEEeecCCCCCCCCCCHHHHHHHHHhcCcc----eeeeEeeecCCCCCchHHHHHhhhcCCcc--cc
Q psy299 90 LDEKF-RDRGL-RILAFPCNQFGGQEPGDADQICEFTKKKNVQ----FDLFEKINVNGDNAHPLWKFLKHKQGGTL--VD 161 (240)
Q Consensus 90 l~~~~-~~~~v-~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~----fp~~~~~d~~~~~~~~l~~~~~~~~~~~~--~~ 161 (240)
.++++ +.+|+ .|+.||+| ++-.++.|.+..++. ++++ .|.++ ++.+.++....... .+
T Consensus 96 ~~d~~~k~kGvd~I~ciSVN--------D~FVm~AW~k~~~~~~~~~i~~l--aD~~~----eftkalGl~~~~~~gg~R 161 (199)
T 4h86_A 96 YLDELVKEKEVDQVIVVTVD--------NPFANQAWAKSLGVKDTTHIKFA--SDPGC----AFTKSIGFELAVGDGVYW 161 (199)
T ss_dssp HHHHHHHHSCCCEEEEEESS--------CHHHHHHHHHHTTCCCCSSEEEE--ECGGG----HHHHHTTCEEEEETTEEE
T ss_pred HHHHHHHhcCCcEEEEEEcC--------CHHHHHHHHHHhccccccccccc--CCcch----HHHHhcCceeecCCCcce
Confidence 88765 67777 57888987 899999999987663 5666 33333 33344443221100 11
Q ss_pred cccccceEEEEcCCCCeEEecc
Q psy299 162 AIKWNFTKFIVDKNGVPVERHA 183 (240)
Q Consensus 162 ~v~~~P~~~lID~~G~Iv~~~~ 183 (240)
+-| ..+||| +|+|.+.+.
T Consensus 162 S~R---ya~IVd-DGvV~~~~v 179 (199)
T 4h86_A 162 SGR---WAMVVE-NGIVTYAAK 179 (199)
T ss_dssp ECS---EEEEEE-TTEEEEEEE
T ss_pred eeE---EEEEEE-CCEEEEEEE
Confidence 223 357888 999988764
No 239
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.10 E-value=1e-05 Score=74.73 Aligned_cols=42 Identities=10% Similarity=-0.001 Sum_probs=36.4
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
.+++.++.||++|||+|+...|.++++..++. ++.+..|..|
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~ 157 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGG 157 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETT
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEech
Confidence 46788999999999999999999999988876 5888888655
No 240
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.06 E-value=2.1e-06 Score=70.15 Aligned_cols=37 Identities=19% Similarity=0.310 Sum_probs=30.0
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEe
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAF 104 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~V 104 (240)
.++++|+.||.+|||+|+...|.|+++.+ .++.+..+
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~----~~v~v~~~ 121 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYND----LGITVRYL 121 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHH----TTEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHh----CCcEEEEE
Confidence 57899999999999999999999988644 24666544
No 241
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=97.97 E-value=6.4e-06 Score=56.32 Aligned_cols=36 Identities=3% Similarity=-0.071 Sum_probs=26.9
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 69 VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
++.||++|||+|+...+.|+++.+++ ++.+..+.+|
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~v~ 39 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPS---KYTVEIVHLG 39 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTT---TEEEEEEETT
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhc---CCeEEEEEec
Confidence 67899999999999999998876554 3444444444
No 242
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.93 E-value=3.8e-05 Score=64.38 Aligned_cols=93 Identities=10% Similarity=0.047 Sum_probs=63.4
Q ss_pred CCcEEEEEEe--cCCCCCcHHHHHHHHHHHHHHhh--cCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeec
Q psy299 64 KGHVLVIVNV--ASRCGYTGKHYKELVELDEKFRD--RGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINV 139 (240)
Q Consensus 64 ~gk~vlv~F~--atwCp~C~~~~~~L~~l~~~~~~--~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~ 139 (240)
.++++||.|| |+||+ ..|.+.++.+.+.+ .++.|..|.+|.++ .+...+.++++++.-
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g------~~~n~~la~~~~V~~-------- 93 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYG------ELENKALGDRYKVDD-------- 93 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSST------TCTTHHHHHHTTCCT--------
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCccc------ccccHHHHHHhCCCc--------
Confidence 4679999999 99998 78999999999975 36888889877210 011233445555430
Q ss_pred CCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCe--EEec--cCCCCccchHHHHHHhcc
Q psy299 140 NGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVP--VERH--AANASPASLIPHIEILGR 200 (240)
Q Consensus 140 ~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~I--v~~~--~~~~~~~~l~~~L~~ll~ 200 (240)
...|+++++- |++ ...+ .+..+.+.|.+.|++.+.
T Consensus 94 ------------------------~~~PTl~~F~--G~~~~~~~y~~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 94 ------------------------KNFPSIFLFK--GNADEYVQLPSHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp ------------------------TSCCEEEEES--SSSSSEEECCTTSCCCHHHHHHHHHHHSS
T ss_pred ------------------------CCCCeEEEEe--CCcCcceeecccCCCCHHHHHHHHHHhhc
Confidence 0336666664 763 4455 677777789988888765
No 243
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.87 E-value=2.8e-05 Score=64.92 Aligned_cols=93 Identities=11% Similarity=0.111 Sum_probs=62.1
Q ss_pred CCcEEEEEEec--CCCCCcHHHHHHHHHHHHHHhh-cCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecC
Q psy299 64 KGHVLVIVNVA--SRCGYTGKHYKELVELDEKFRD-RGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVN 140 (240)
Q Consensus 64 ~gk~vlv~F~a--twCp~C~~~~~~L~~l~~~~~~-~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~ 140 (240)
.++++||.||+ +||+ ..|.+.++.+.+.+ .++.|..|.+|..+ -....++++++++..
T Consensus 21 ~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g------~~~~~~l~~~~~V~~--------- 81 (240)
T 2qc7_A 21 KSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYG------DKLNMELSEKYKLDK--------- 81 (240)
T ss_dssp GCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSS------SCCSHHHHHHTTCCG---------
T ss_pred CCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCccc------chhhHHHHHHcCCCC---------
Confidence 35799999999 9998 78999999999975 35888888765210 001133445555430
Q ss_pred CCCCchHHHHHhhhcCCcccccccccceEEEEcCCCC--eEEeccCCCCccchHHHHHHhc
Q psy299 141 GDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGV--PVERHAANASPASLIPHIEILG 199 (240)
Q Consensus 141 ~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~--Iv~~~~~~~~~~~l~~~L~~ll 199 (240)
...|+++++ ++|+ ....+.|..+.+.|.+.|++..
T Consensus 82 -----------------------~~~PTl~~f-~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 82 -----------------------ESYPVFYLF-RDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp -----------------------GGCSEEEEE-ETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred -----------------------CCCCEEEEE-eCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 033665666 5666 3556777777778888888764
No 244
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=97.86 E-value=6.6e-06 Score=65.76 Aligned_cols=39 Identities=18% Similarity=0.100 Sum_probs=33.0
Q ss_pred CcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeec
Q psy299 65 GHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPC 106 (240)
Q Consensus 65 gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~ 106 (240)
++++||.|+..|||+|...-|.+.++.+++ + +.+.-+.+
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~--v~~~~~p~ 60 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-G--TDIGKMHI 60 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-T--SCCEEEEC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-C--CeEEEEec
Confidence 689999999999999999999999999998 3 55555544
No 245
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.85 E-value=1e-05 Score=64.79 Aligned_cols=43 Identities=9% Similarity=0.130 Sum_probs=34.6
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHH---HHHHHHHhhcCcEEEEeecC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKEL---VELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L---~~l~~~~~~~~v~vi~Vs~D 107 (240)
.++++||.||..|||+|....|.+ .++.+++.+ ++.++.+.++
T Consensus 13 ~~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 58 (189)
T 3l9v_A 13 VDAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVS 58 (189)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECS
T ss_pred CCCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEech
Confidence 457899999999999999999987 677777776 4777766654
No 246
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.85 E-value=7.3e-06 Score=67.29 Aligned_cols=39 Identities=41% Similarity=0.756 Sum_probs=35.1
Q ss_pred CCCCcceeEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 202 SAIKWNFTKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 202 ~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
..|+|||++||||++|+++.||.+.+.|+++.+.|++.|
T Consensus 172 ~~i~~npttfLID~~G~vv~~~~g~~~~~~l~~~I~~ll 210 (215)
T 2i3y_A 172 HDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYL 210 (215)
T ss_dssp TCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHHHG
T ss_pred cccccCceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 468999999999999999999999899999988888753
No 247
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=97.85 E-value=5.7e-06 Score=56.82 Aligned_cols=37 Identities=11% Similarity=0.099 Sum_probs=31.1
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 69 VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
++.|+++|||+|+...+.|+++..+++ ++.+..+.++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~--~i~~~~vdi~ 39 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD--DFQYQYVDIR 39 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS--SCEEEEECHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC--CceEEEEecc
Confidence 678999999999999999999888754 5888777654
No 248
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.76 E-value=7.2e-05 Score=65.29 Aligned_cols=95 Identities=2% Similarity=-0.015 Sum_probs=65.1
Q ss_pred cEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCCCc
Q psy299 66 HVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDNAH 145 (240)
Q Consensus 66 k~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~ 145 (240)
++++|.|++.||+.|....+.+++++++++++ +.++.|.+|. +.....++.+|+.-
T Consensus 136 ~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~~---------~~~~~~~~~fgi~~-------------- 191 (361)
T 3uem_A 136 KTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSDH---------TDNQRILEFFGLKK-------------- 191 (361)
T ss_dssp CEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTTS---------GGGHHHHHHTTCCT--------------
T ss_pred CcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCCh---------HHHHHHHHHcCCCc--------------
Confidence 57789999999999999999999999999986 8888886541 12344455555421
Q ss_pred hHHHHHhhhcCCcccccccccceEEEEcCCCCe-EEec-cCCCCccchHHHHHHhcccC
Q psy299 146 PLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVP-VERH-AANASPASLIPHIEILGRTS 202 (240)
Q Consensus 146 ~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~I-v~~~-~~~~~~~~l~~~L~~ll~~~ 202 (240)
...|+..+++..+.. .+.. .+..+.+.|.+.++.++++.
T Consensus 192 ------------------~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~ 232 (361)
T 3uem_A 192 ------------------EECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGK 232 (361)
T ss_dssp ------------------TTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTC
T ss_pred ------------------cCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCC
Confidence 012666777764432 2322 24567778999999988754
No 249
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.67 E-value=1.8e-05 Score=64.51 Aligned_cols=38 Identities=32% Similarity=0.677 Sum_probs=34.3
Q ss_pred CCCCcceeEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 202 SAIKWNFTKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 202 ~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
..|.|||++||||++|++++||...+.|+++.+.|++.
T Consensus 154 ~~i~~~~ttflID~~G~i~~~~~g~~~~~~l~~~I~~l 191 (207)
T 2r37_A 154 HDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSY 191 (207)
T ss_dssp TCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHHH
T ss_pred CcccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 46899999999999999999999989998888888764
No 250
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.67 E-value=3.2e-05 Score=60.65 Aligned_cols=41 Identities=7% Similarity=0.055 Sum_probs=33.6
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEee
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFP 105 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs 105 (240)
.++++||.|+.-.||+|...-+.+.++.+++.+. +.++-+.
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~-~~~~~~~ 60 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEG-AKFQKNH 60 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTT-CEEEEEE
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCc-eEEEEEe
Confidence 4688999999899999999999999999998774 5554443
No 251
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=97.54 E-value=9.5e-05 Score=58.60 Aligned_cols=43 Identities=19% Similarity=0.233 Sum_probs=36.0
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHH-HHHHHHHhhcCcEEEEeecC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKEL-VELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L-~~l~~~~~~~~v~vi~Vs~D 107 (240)
.+++++|.||...||.|....+.+ .++.+++... +.+..+.++
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~-v~~~~~~l~ 59 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDI-VAFTPFHLE 59 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTT-CEEEEEECT
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCc-eEEEEEecC
Confidence 467788999999999999999999 9999888753 777777665
No 252
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.47 E-value=0.00035 Score=58.03 Aligned_cols=43 Identities=12% Similarity=0.193 Sum_probs=33.9
Q ss_pred CcEEEEEEecCC--CCCcHHHHHHHHHHHHHHhh-cC---cEEEEeecC
Q psy299 65 GHVLVIVNVASR--CGYTGKHYKELVELDEKFRD-RG---LRILAFPCN 107 (240)
Q Consensus 65 gk~vlv~F~atw--Cp~C~~~~~~L~~l~~~~~~-~~---v~vi~Vs~D 107 (240)
+++++|.||+.| |++|+...+.+.++.+.+.. +| +.++.+..|
T Consensus 25 ~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d 73 (243)
T 2hls_A 25 VNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRE 73 (243)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETT
T ss_pred CCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCC
Confidence 578999999999 99999999999999987532 11 667666544
No 253
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=97.40 E-value=1.9e-05 Score=67.81 Aligned_cols=37 Identities=11% Similarity=-0.038 Sum_probs=27.6
Q ss_pred ccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHH
Q psy299 58 VPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKF 94 (240)
Q Consensus 58 v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~ 94 (240)
..+.+.-++..++.||++|||+|++..|.+.++.+++
T Consensus 190 ~~la~~l~~~~vV~F~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 190 VGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp HHHHHHHHHTTCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred HHHHHHhCCCCEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 3343333444579999999999999999999887544
No 254
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.32 E-value=0.0022 Score=45.27 Aligned_cols=43 Identities=12% Similarity=0.118 Sum_probs=28.7
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHH
Q psy299 69 VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTK 125 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~ 125 (240)
++.|..+|||+|.+.-..|.+ +|+.+.-+.+| .+++..+.+.+
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~-------~gi~y~~idi~-------~d~~~~~~~~~ 48 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTA-------NRIAYDEVDIE-------HNRAAAEFVGS 48 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHH-------TTCCCEEEETT-------TCHHHHHHHHH
T ss_pred EEEEcCCCCHhHHHHHHHHHh-------cCCceEEEEcC-------CCHHHHHHHHH
Confidence 677889999999976655543 56777677665 35555444433
No 255
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.30 E-value=3.7e-05 Score=62.17 Aligned_cols=43 Identities=16% Similarity=0.248 Sum_probs=37.5
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHH---HHHHHHHhhcCcEEEEeecC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKEL---VELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L---~~l~~~~~~~~v~vi~Vs~D 107 (240)
.++++||.||+.|||+|....|.| .++.+++++ ++.+.-+.++
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~v~ 157 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYHVN 157 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEECS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC-CCEEEEeccC
Confidence 478999999999999999999998 999998876 4888777765
No 256
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.27 E-value=0.00018 Score=57.67 Aligned_cols=43 Identities=12% Similarity=0.163 Sum_probs=34.9
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHH---HHHHHHHhhcCcEEEEeecC
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKEL---VELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L---~~l~~~~~~~~v~vi~Vs~D 107 (240)
.++++|+.|+..+||+|...-|.| .++.+++.+. +.++-+.+.
T Consensus 20 ~~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~-v~~~~~~~~ 65 (191)
T 3l9s_A 20 AGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEG-TKMTKYHVE 65 (191)
T ss_dssp CSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTT-CCEEEEECS
T ss_pred CCCCeEEEEECCCChhHHHhChhccchHHHHHhCCCC-cEEEEEecc
Confidence 458999999999999999999987 6899998863 666665544
No 257
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.18 E-value=0.00041 Score=53.35 Aligned_cols=28 Identities=18% Similarity=0.302 Sum_probs=24.3
Q ss_pred CCCcEEEEEEecCCCCCcHHHHHHHHHH
Q psy299 63 YKGHVLVIVNVASRCGYTGKHYKELVEL 90 (240)
Q Consensus 63 ~~gk~vlv~F~atwCp~C~~~~~~L~~l 90 (240)
-.|+++|+.|.-.+||+|+...+.|+++
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l 39 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM 39 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc
Confidence 3578999999999999999999988654
No 258
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=97.10 E-value=0.0003 Score=55.29 Aligned_cols=39 Identities=26% Similarity=0.469 Sum_probs=35.3
Q ss_pred CCCCcceeEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 202 SAIKWNFTKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 202 ~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
..+.|||.+||||++|+++.+|.....++++.+.|++.|
T Consensus 142 ~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 142 KEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp CCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred CccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 468999999999999999999998888999999998765
No 259
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=97.08 E-value=0.00032 Score=56.89 Aligned_cols=37 Identities=32% Similarity=0.721 Sum_probs=34.1
Q ss_pred CCCcceeEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 203 AIKWNFTKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 203 ~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
.|.|++++||||++|+++.+|.....++++.+.|++.
T Consensus 169 ~i~~~p~tflID~~G~i~~~~~g~~~~~~l~~~I~~l 205 (208)
T 2f8a_A 169 DVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEAL 205 (208)
T ss_dssp CCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHH
T ss_pred ccccCceEEEEcCCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 5899999999999999999999999999999988874
No 260
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.07 E-value=0.00091 Score=45.10 Aligned_cols=32 Identities=9% Similarity=0.244 Sum_probs=24.9
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 69 VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
++.||++|||+|+...+.|.+ .++.+..+.+|
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~-------~~i~~~~vdi~ 34 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMEN-------RGFDFEMINVD 34 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETT
T ss_pred EEEEcCCCChhHHHHHHHHHH-------CCCCeEEEECC
Confidence 577999999999998887765 35666667665
No 261
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=97.06 E-value=0.00028 Score=55.36 Aligned_cols=38 Identities=24% Similarity=0.484 Sum_probs=34.3
Q ss_pred CCCCcceeEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 202 SAIKWNFTKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 202 ~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
..|.|||.+||||++|+++.+|.....++++.+.|++.
T Consensus 131 ~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 168 (180)
T 3kij_A 131 KEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAAL 168 (180)
T ss_dssp CCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHH
T ss_pred CCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHH
Confidence 56899999999999999999999999998888888764
No 262
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=97.03 E-value=0.00029 Score=55.73 Aligned_cols=43 Identities=42% Similarity=0.733 Sum_probs=37.5
Q ss_pred hcccCCCCcceeEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 198 LGRTSAIKWNFTKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 198 ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
....+.|-|||..||||++|+++.+|.....++++.+.|++.|
T Consensus 140 ~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL 182 (187)
T 3dwv_A 140 ILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLL 182 (187)
T ss_dssp SBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC
T ss_pred ccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 3355678999999999999999999999999999999988754
No 263
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.97 E-value=0.0066 Score=48.08 Aligned_cols=111 Identities=10% Similarity=0.051 Sum_probs=66.2
Q ss_pred CCCCcEEEEEEecCCCCCcHHHHHHH---HHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeee
Q psy299 62 TYKGHVLVIVNVASRCGYTGKHYKEL---VELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKIN 138 (240)
Q Consensus 62 ~~~gk~vlv~F~atwCp~C~~~~~~L---~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d 138 (240)
.-.+|+++|++..+||+.|......+ .++.+-+.+ ++.+++..++ +.+....+....+-.+
T Consensus 52 k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~-nfV~w~~dv~--------~~e~~~~~~~~~~~~~------- 115 (178)
T 2ec4_A 52 ARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ-NFITWAWDLT--------KDSNRARFLTMCNRHF------- 115 (178)
T ss_dssp TTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH-TEEEEEEECC--------SHHHHHHHHHHHHHHT-------
T ss_pred hhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc-CEEEEEEeCC--------Cchhhhhhhhhhhhhh-------
Confidence 45689999999999999877654322 223333333 6888888765 4443333222110000
Q ss_pred cCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCC---CeEEeccCCCCccchHHHHHHhcc
Q psy299 139 VNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNG---VPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 139 ~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G---~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
+ ..+...++. ..+...|...+|++.| +++.+..|..+++++.+.|+..+.
T Consensus 116 --g---~~~a~~~~~-------~~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~e 168 (178)
T 2ec4_A 116 --G---SVVAQTIRT-------QKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAME 168 (178)
T ss_dssp --C---HHHHHHHHH-------SCSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred --H---HHHHHHHhh-------cCCCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHHH
Confidence 0 000000000 0234458889998764 788899999999998888877664
No 264
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=96.93 E-value=0.0013 Score=51.11 Aligned_cols=50 Identities=18% Similarity=0.216 Sum_probs=39.8
Q ss_pred ccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhc-CcEEEEeecC
Q psy299 58 VPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDR-GLRILAFPCN 107 (240)
Q Consensus 58 v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~-~v~vi~Vs~D 107 (240)
+.+.+..++++|+.|+..+||+|....+.+.++.++|.+. ++.++...+.
T Consensus 20 ~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 70 (175)
T 1z6m_A 20 LHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFD 70 (175)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred cccCCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCC
Confidence 4456667899999999999999999999999999988322 4777665543
No 265
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=96.79 E-value=0.00073 Score=55.64 Aligned_cols=48 Identities=17% Similarity=0.189 Sum_probs=35.7
Q ss_pred cCCCCCCcEEEEEEecCCCCCcHHHHHHH-HHHHHHHhhc-CcEEEEeec
Q psy299 59 PLSTYKGHVLVIVNVASRCGYTGKHYKEL-VELDEKFRDR-GLRILAFPC 106 (240)
Q Consensus 59 ~ls~~~gk~vlv~F~atwCp~C~~~~~~L-~~l~~~~~~~-~v~vi~Vs~ 106 (240)
.+.+-.++++|+.|.-..||+|...-+.+ .++.++|-+. ++.++...+
T Consensus 33 ~~G~~~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~ 82 (226)
T 3f4s_A 33 LLGDPKAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHF 82 (226)
T ss_dssp EESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEEC
T ss_pred ccCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeC
Confidence 34455678999999999999999988864 7888888432 466665543
No 266
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=96.75 E-value=0.0015 Score=43.11 Aligned_cols=32 Identities=16% Similarity=0.148 Sum_probs=24.5
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 69 VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
++.|+++|||+|+...+.|+++ ++.+..+.++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~di~ 34 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-------GLAYNTVDIS 34 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETT
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCCcEEEECC
Confidence 5678999999999988887753 4666666655
No 267
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=96.73 E-value=0.00092 Score=51.78 Aligned_cols=40 Identities=45% Similarity=0.720 Sum_probs=34.8
Q ss_pred ccCCCCcceeEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 200 RTSAIKWNFTKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 200 ~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
..+.|.||+..||||++|+++.++.....++++.+.|++.
T Consensus 127 ~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 166 (171)
T 3cmi_A 127 GLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEEL 166 (171)
T ss_dssp SCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHH
T ss_pred CCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHH
Confidence 3457899999999999999999998888888888888764
No 268
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=96.67 E-value=0.0043 Score=49.91 Aligned_cols=47 Identities=13% Similarity=0.203 Sum_probs=35.1
Q ss_pred CCCCCCcEEEEEEecCCCCCcHHHHHHH-HHHHHHHhhc-CcEEEEeec
Q psy299 60 LSTYKGHVLVIVNVASRCGYTGKHYKEL-VELDEKFRDR-GLRILAFPC 106 (240)
Q Consensus 60 ls~~~gk~vlv~F~atwCp~C~~~~~~L-~~l~~~~~~~-~v~vi~Vs~ 106 (240)
+.+-.++++|+.|+-..||+|...-+.+ ..+.++|.+. ++.++...+
T Consensus 24 ~G~~~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 24 LGKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp ESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred ecCCCCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 4555678999999999999999988876 5666677542 477766544
No 269
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=96.59 E-value=0.00096 Score=52.78 Aligned_cols=39 Identities=44% Similarity=0.792 Sum_probs=34.2
Q ss_pred cCCCCcceeEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 201 TSAIKWNFTKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 201 ~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
.+.|.|+|..||||++|+++.++.....++++.+.|++.
T Consensus 145 ~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 183 (190)
T 2vup_A 145 TKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPL 183 (190)
T ss_dssp CCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHH
T ss_pred CccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 336899999999999999999998888888888888764
No 270
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=96.51 E-value=0.0022 Score=50.46 Aligned_cols=38 Identities=45% Similarity=0.841 Sum_probs=35.0
Q ss_pred CCCcceeEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 203 AIKWNFTKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 203 ~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
.|.|+..+||||++|+++.+|.....++++.+.|++.|
T Consensus 148 ~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 185 (185)
T 2gs3_A 148 AIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHYF 185 (185)
T ss_dssp SCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHHHC
T ss_pred cccccceEEEECCCCCEEEeeCCCCCHHHHHHHHHHhC
Confidence 58999999999999999999998888999999998865
No 271
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=96.42 E-value=0.0029 Score=46.44 Aligned_cols=35 Identities=17% Similarity=0.277 Sum_probs=22.5
Q ss_pred EEEEecCCCCCcHHH-HHHHHHHHHHHhhcCcEEEEeecC
Q psy299 69 VIVNVASRCGYTGKH-YKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 69 lv~F~atwCp~C~~~-~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
++.|+++|||+|+.. .+.|.++. ..++.+..+.+|
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~----~~~i~~~~vdid 62 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLK----VPRSKVLVLQLN 62 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSC----CCGGGEEEEEGG
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcC----CCCCCeEEEECc
Confidence 566999999999987 45443321 111666666665
No 272
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.35 E-value=0.006 Score=45.48 Aligned_cols=31 Identities=10% Similarity=0.247 Sum_probs=22.5
Q ss_pred EEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 70 IVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 70 v~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
+.|+++|||+|+...+.|.++ ++.+..+.+|
T Consensus 30 vvf~~~~Cp~C~~~~~~L~~~-------~i~~~~vdid 60 (130)
T 2cq9_A 30 VIFSKTSCSYCTMAKKLFHDM-------NVNYKVVELD 60 (130)
T ss_dssp EEEECSSCSHHHHHHHHHHHH-------TCCCEEEETT
T ss_pred EEEEcCCChHHHHHHHHHHHc-------CCCcEEEECc
Confidence 349999999999988888764 3444455554
No 273
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=96.30 E-value=0.0018 Score=45.99 Aligned_cols=24 Identities=25% Similarity=0.375 Sum_probs=19.8
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHH
Q psy299 69 VIVNVASRCGYTGKHYKELVELDE 92 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~ 92 (240)
++.|+++|||+|+...+.|.++..
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~ 37 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPF 37 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCB
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCC
Confidence 567999999999998888876543
No 274
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=96.28 E-value=0.0049 Score=41.34 Aligned_cols=32 Identities=19% Similarity=0.353 Sum_probs=23.3
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 69 VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
++.|+++|||.|+...+.|++. ++.+..+.+|
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~~i~ 34 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-------GVSFQELPID 34 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCCEEEECT
T ss_pred EEEEECCCChhHHHHHHHHHHC-------CCCcEEEECC
Confidence 5678899999999888877653 4555555554
No 275
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=96.16 E-value=0.031 Score=45.32 Aligned_cols=94 Identities=4% Similarity=-0.064 Sum_probs=61.9
Q ss_pred EEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCCCch
Q psy299 67 VLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDNAHP 146 (240)
Q Consensus 67 ~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~ 146 (240)
..++.|...||+.|....+.++++.++++++ +.++.+..| . +.....++.+|+.-
T Consensus 133 ~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~--------~-~~~~~~l~~fgl~~--------------- 187 (227)
T 4f9z_D 133 IHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSG--------M-KENGKVISFFKLKE--------------- 187 (227)
T ss_dssp EEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETT--------S-GGGHHHHHHTTCCG---------------
T ss_pred eEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCc--------c-HhHHHHHHHcCCCc---------------
Confidence 4445566789999999999999999999986 877777643 1 12233444455421
Q ss_pred HHHHHhhhcCCcccccccccceEEEEcCCCCeEEecc-CCCCccchHHHHHHhcccC
Q psy299 147 LWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHA-ANASPASLIPHIEILGRTS 202 (240)
Q Consensus 147 l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~-~~~~~~~l~~~L~~ll~~~ 202 (240)
...|...+++..+...+... +..+.+.|.+.++.+++|+
T Consensus 188 -----------------~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gk 227 (227)
T 4f9z_D 188 -----------------SQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLSGK 227 (227)
T ss_dssp -----------------GGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHTTC
T ss_pred -----------------ccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHhCCC
Confidence 01266677775554344332 4567788999999988763
No 276
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=96.15 E-value=0.0038 Score=45.30 Aligned_cols=23 Identities=17% Similarity=0.200 Sum_probs=18.5
Q ss_pred EEEEEEecCCCCCcHHHHHHHHH
Q psy299 67 VLVIVNVASRCGYTGKHYKELVE 89 (240)
Q Consensus 67 ~vlv~F~atwCp~C~~~~~~L~~ 89 (240)
..++.|+++|||+|+...+.|.+
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~ 41 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNK 41 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTT
T ss_pred CCEEEEEeCCChhHHHHHHHHHH
Confidence 34677999999999988777654
No 277
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=96.14 E-value=0.0039 Score=47.62 Aligned_cols=39 Identities=44% Similarity=0.784 Sum_probs=34.6
Q ss_pred CCCCcceeEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 202 SAIKWNFTKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 202 ~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
..+-|++..||||++|+++.+|.....++++.+.|++.|
T Consensus 129 ~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 167 (170)
T 2p5q_A 129 DDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLL 167 (170)
T ss_dssp SCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHT
T ss_pred CcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHh
Confidence 568899999999999999999988888899998888754
No 278
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=96.11 E-value=0.0087 Score=46.96 Aligned_cols=44 Identities=18% Similarity=0.286 Sum_probs=32.8
Q ss_pred CCCcEEEEEEecCCCCCcHHHHHHH-HHHHHHHhhc-CcEEEEeec
Q psy299 63 YKGHVLVIVNVASRCGYTGKHYKEL-VELDEKFRDR-GLRILAFPC 106 (240)
Q Consensus 63 ~~gk~vlv~F~atwCp~C~~~~~~L-~~l~~~~~~~-~v~vi~Vs~ 106 (240)
-.+++.|+.|+-.-||.|....+.+ ..+.++|.+. ++.++...+
T Consensus 9 ~~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~~ 54 (186)
T 3bci_A 9 KNGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNL 54 (186)
T ss_dssp --CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEC
T ss_pred CCCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEec
Confidence 3567889999999999999999998 5677788653 466665443
No 279
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=96.02 E-value=0.012 Score=41.80 Aligned_cols=35 Identities=11% Similarity=0.191 Sum_probs=25.5
Q ss_pred cEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 66 HVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 66 k~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
+.-++.|+++|||.|+...+.|.++ ++.+..+.+|
T Consensus 15 ~~~v~vy~~~~Cp~C~~ak~~L~~~-------~i~y~~idI~ 49 (99)
T 3qmx_A 15 SAKIEIYTWSTCPFCMRALALLKRK-------GVEFQEYCID 49 (99)
T ss_dssp CCCEEEEECTTCHHHHHHHHHHHHH-------TCCCEEEECT
T ss_pred CCCEEEEEcCCChhHHHHHHHHHHC-------CCCCEEEEcC
Confidence 3446779999999999988888764 4555555555
No 280
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=95.96 E-value=0.009 Score=41.15 Aligned_cols=32 Identities=19% Similarity=0.365 Sum_probs=23.6
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 69 VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
++.|+++|||.|+...+.|.+ .++.+..+.++
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~-------~~i~~~~~di~ 39 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLAR-------KGAEFNEIDAS 39 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEEST
T ss_pred EEEEECCCChhHHHHHHHHHH-------cCCCcEEEECC
Confidence 677899999999987777665 24566666555
No 281
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=95.95 E-value=0.0074 Score=46.11 Aligned_cols=22 Identities=18% Similarity=0.397 Sum_probs=18.1
Q ss_pred EEEEecCCCCCcHHHHHHHHHH
Q psy299 69 VIVNVASRCGYTGKHYKELVEL 90 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l 90 (240)
++.|+++|||+|+...+.|.++
T Consensus 51 Vvvf~~~~Cp~C~~~k~~L~~~ 72 (146)
T 2ht9_A 51 VVIFSKTSCSYCTMAKKLFHDM 72 (146)
T ss_dssp EEEEECTTCHHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHc
Confidence 3449999999999988888764
No 282
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=95.80 E-value=0.012 Score=41.84 Aligned_cols=33 Identities=15% Similarity=0.378 Sum_probs=22.9
Q ss_pred EEEEEEec-----CCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 67 VLVIVNVA-----SRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 67 ~vlv~F~a-----twCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
.++| |+. +|||+|+...+.|.++ ++.+..+.++
T Consensus 18 ~vvv-f~~g~~~~~~C~~C~~~~~~L~~~-------~i~~~~vdi~ 55 (105)
T 2yan_A 18 SVML-FMKGNKQEAKCGFSKQILEILNST-------GVEYETFDIL 55 (105)
T ss_dssp SEEE-EESBCSSSBCTTHHHHHHHHHHHH-------TCCCEEEEGG
T ss_pred CEEE-EEecCCCCCCCccHHHHHHHHHHC-------CCCeEEEECC
Confidence 3444 665 9999999888887664 4556566555
No 283
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=95.73 E-value=0.029 Score=38.35 Aligned_cols=30 Identities=17% Similarity=0.344 Sum_probs=22.4
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEee
Q psy299 69 VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFP 105 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs 105 (240)
++.|+++|||+|+...+.|.+. ++.+..+.
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~~-------~i~~~~vd 37 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDKK-------GVKYTDID 37 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHHH-------TCCEEEEC
T ss_pred EEEEECCCChhHHHHHHHHHHc-------CCCcEEEE
Confidence 6778999999999888777653 45555554
No 284
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=95.72 E-value=0.0067 Score=46.22 Aligned_cols=37 Identities=41% Similarity=0.832 Sum_probs=33.3
Q ss_pred CCCcceeEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 203 AIKWNFTKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 203 ~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
.|.|....||||++|+++.+|.....++++.+.|++.
T Consensus 129 ~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 165 (169)
T 2v1m_A 129 NIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMEL 165 (169)
T ss_dssp SCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHH
T ss_pred cccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHH
Confidence 4889999999999999999998888889999888864
No 285
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=95.66 E-value=0.0069 Score=47.31 Aligned_cols=38 Identities=45% Similarity=0.841 Sum_probs=34.2
Q ss_pred CCCcceeEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 203 AIKWNFTKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 203 ~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
.|.|....||||++|+++.+|.....++++.+.|++.|
T Consensus 146 ~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 183 (183)
T 2obi_A 146 AIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHYF 183 (183)
T ss_dssp SCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGGGC
T ss_pred cccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHhC
Confidence 58899999999999999999998888899998888765
No 286
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=95.59 E-value=0.031 Score=38.32 Aligned_cols=22 Identities=18% Similarity=0.147 Sum_probs=18.2
Q ss_pred EEEEecCCCCCcHHHHHHHHHH
Q psy299 69 VIVNVASRCGYTGKHYKELVEL 90 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l 90 (240)
++.|+++|||.|+...+.|.++
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~ 35 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKRE 35 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc
Confidence 5678999999999888777764
No 287
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=95.32 E-value=0.011 Score=40.09 Aligned_cols=22 Identities=18% Similarity=0.133 Sum_probs=17.5
Q ss_pred EEEEEecCCCCCcHHHHHHHHH
Q psy299 68 LVIVNVASRCGYTGKHYKELVE 89 (240)
Q Consensus 68 vlv~F~atwCp~C~~~~~~L~~ 89 (240)
.++.|+.+|||.|+.....|.+
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~ 26 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEE 26 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEEEcCCChhHHHHHHHHHH
Confidence 3677889999999987766654
No 288
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=95.25 E-value=0.045 Score=39.19 Aligned_cols=26 Identities=19% Similarity=0.437 Sum_probs=19.9
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 75 SRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 75 twCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
+|||+|+...+.|.++ |+.+..+.++
T Consensus 28 ~~Cp~C~~ak~~L~~~-------~i~~~~vdi~ 53 (109)
T 1wik_A 28 AKCGFSKQILEILNST-------GVEYETFDIL 53 (109)
T ss_dssp CCSSTHHHHHHHHHHT-------CSCEEEEESS
T ss_pred CCCchHHHHHHHHHHc-------CCCeEEEECC
Confidence 9999999887777553 5777777665
No 289
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=95.18 E-value=0.0075 Score=45.69 Aligned_cols=36 Identities=8% Similarity=0.271 Sum_probs=30.9
Q ss_pred CCcceeEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 204 IKWNFTKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 204 i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
+.|+...||||++|+++.+|.....++++.+.|++.
T Consensus 124 ~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 159 (164)
T 2ggt_A 124 VDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATH 159 (164)
T ss_dssp EEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHH
T ss_pred EeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 456668999999999999998888888888888764
No 290
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=95.13 E-value=0.044 Score=43.76 Aligned_cols=40 Identities=8% Similarity=-0.082 Sum_probs=31.8
Q ss_pred cccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccC
Q psy299 162 AIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTS 202 (240)
Q Consensus 162 ~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~ 202 (240)
++.++|++ +|+.+|+.+....+..+++.+.+.|++++++.
T Consensus 166 gv~g~Pt~-~v~~~~~~~~~~~g~~~~e~~~~~i~~~~~~~ 205 (208)
T 3kzq_A 166 GVNSYPSL-VLQINDAYFPIEVDYLSTEPTLKLIRERIIEN 205 (208)
T ss_dssp TCCSSSEE-EEEETTEEEEECCCSSCSHHHHHHHHHHHHHT
T ss_pred CCCcccEE-EEEECCEEEEeeCCCCCHHHHHHHHHHHHhcc
Confidence 67788885 56677887777777888899999999998764
No 291
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=95.12 E-value=0.02 Score=42.61 Aligned_cols=21 Identities=24% Similarity=0.347 Sum_probs=16.3
Q ss_pred EEEEecCCCCCcHHH-HHHHHH
Q psy299 69 VIVNVASRCGYTGKH-YKELVE 89 (240)
Q Consensus 69 lv~F~atwCp~C~~~-~~~L~~ 89 (240)
++.|+.+|||+|+.. .+.|.+
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~ 60 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQE 60 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTT
T ss_pred EEEEECCCCCchHHHHHHHHHh
Confidence 577899999999977 555543
No 292
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=94.90 E-value=0.012 Score=41.81 Aligned_cols=23 Identities=35% Similarity=0.372 Sum_probs=19.2
Q ss_pred EEEEEecCCCCCcHHHHHHHHHH
Q psy299 68 LVIVNVASRCGYTGKHYKELVEL 90 (240)
Q Consensus 68 vlv~F~atwCp~C~~~~~~L~~l 90 (240)
.++.|+++|||+|++..+.|.++
T Consensus 23 ~v~ly~~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 23 KVIMYGLSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHH
T ss_pred eEEEEcCCCCchHHHHHHHHHHc
Confidence 36679999999999998888764
No 293
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=94.51 E-value=0.013 Score=42.18 Aligned_cols=21 Identities=14% Similarity=0.317 Sum_probs=17.8
Q ss_pred EEEEecCCCCCcHHHHHHHHH
Q psy299 69 VIVNVASRCGYTGKHYKELVE 89 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~ 89 (240)
++.|+++|||+|+...+.|.+
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~ 41 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKR 41 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHH
Confidence 566999999999988877765
No 294
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=94.03 E-value=0.054 Score=39.10 Aligned_cols=21 Identities=14% Similarity=0.189 Sum_probs=17.0
Q ss_pred EEEEecCCCCCcHHHHHHHHH
Q psy299 69 VIVNVASRCGYTGKHYKELVE 89 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~ 89 (240)
++.|+.+|||.|....+.|.+
T Consensus 19 v~vy~~~~Cp~C~~ak~~L~~ 39 (114)
T 3h8q_A 19 VVIFSKSYCPHSTRVKELFSS 39 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEEcCCCCcHHHHHHHHHH
Confidence 445999999999988777766
No 295
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=93.94 E-value=0.16 Score=36.52 Aligned_cols=31 Identities=13% Similarity=0.072 Sum_probs=25.9
Q ss_pred eEEEEcCCCCeeeecc---CCCCccchhhhhhhcC
Q psy299 209 TKFIVDKNGAPVERHA---ANASPASLIPNIEKYL 240 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 240 (240)
..++||++|+++ ++. ....++++.+.|++.|
T Consensus 102 ~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 102 AFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp EEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred EEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 789999999999 888 7777888888888754
No 296
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=93.76 E-value=0.027 Score=42.86 Aligned_cols=34 Identities=6% Similarity=0.213 Sum_probs=29.2
Q ss_pred cceeEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 206 WNFTKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 206 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
+....||||++|+++.+|.....++++.+.|++.
T Consensus 129 ~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 162 (171)
T 2rli_A 129 HSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRH 162 (171)
T ss_dssp CCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHH
T ss_pred ccceEEEECCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 4448999999999999999888888888888764
No 297
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=93.25 E-value=0.13 Score=38.87 Aligned_cols=31 Identities=10% Similarity=0.298 Sum_probs=22.3
Q ss_pred ceeEEEEcCCCCeeeeccCCCCc----cchhhhhhh
Q psy299 207 NFTKFIVDKNGAPVERHAANASP----ASLIPNIEK 238 (240)
Q Consensus 207 ~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~ 238 (240)
.-..||||++|+++.+| ....+ +++++.|++
T Consensus 125 ~p~~~lid~~G~i~~~~-~~~~~~~~~~~il~~l~~ 159 (163)
T 3gkn_A 125 ERSTFLLSPEGQVVQAW-RKVKVAGHADAVLAALKA 159 (163)
T ss_dssp CCEEEEECTTSCEEEEE-CSCCSTTHHHHHHHHHHH
T ss_pred ceEEEEECCCCeEEEEE-cCCCcccCHHHHHHHHHH
Confidence 34799999999999998 44444 455555543
No 298
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.01 E-value=0.48 Score=33.89 Aligned_cols=38 Identities=13% Similarity=0.161 Sum_probs=22.3
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 69 VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
++.|..++||.|.. ...-++..+.+.+.++.+..+.++
T Consensus 10 V~vy~~~~C~~C~~-~~~~~~ak~~L~~~gi~y~~vdI~ 47 (111)
T 2ct6_A 10 IRVFIASSSGFVAI-KKKQQDVVRFLEANKIEFEEVDIT 47 (111)
T ss_dssp EEEEECSSCSCHHH-HHHHHHHHHHHHHTTCCEEEEETT
T ss_pred EEEEEcCCCCCccc-chhHHHHHHHHHHcCCCEEEEECC
Confidence 56677899999993 111112222333456777777665
No 299
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=92.82 E-value=0.05 Score=40.77 Aligned_cols=31 Identities=10% Similarity=0.063 Sum_probs=26.9
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
..||||++|+++.+|.....++++.+.|++.
T Consensus 123 ~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 153 (160)
T 3lor_A 123 SIILADRKGRIRQVQFGQVDDFVLGLLLGSL 153 (160)
T ss_dssp EEEEECTTSBEEEEEESCCCHHHHHHHHHHH
T ss_pred eEEEECCCCcEEEEecCcCCHHHHHHHHHHH
Confidence 6799999999999998888888888888764
No 300
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=92.66 E-value=0.54 Score=32.21 Aligned_cols=32 Identities=9% Similarity=0.069 Sum_probs=20.2
Q ss_pred EEEEecCCCCCc------HHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 69 VIVNVASRCGYT------GKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 69 lv~F~atwCp~C------~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
++.|..++||.| ...... +.+.|+.+..+.++
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~-------L~~~~i~~~~~di~ 41 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRI-------LDGKRIQYQLVDIS 41 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHH-------HHHTTCCCEEEETT
T ss_pred EEEEEcCCCCCchhhHHHHHHHHH-------HHHCCCceEEEECC
Confidence 556788999999 433333 33456666666655
No 301
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=92.32 E-value=0.079 Score=41.94 Aligned_cols=34 Identities=15% Similarity=0.213 Sum_probs=28.3
Q ss_pred CcceeEEEEcCCCCeeeeccCCCCccchhhhhhh
Q psy299 205 KWNFTKFIVDKNGAPVERHAANASPASLIPNIEK 238 (240)
Q Consensus 205 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (240)
.+....||||++|+++.+|.....++++.+.|++
T Consensus 143 ~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~ 176 (200)
T 2b7k_A 143 DHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVE 176 (200)
T ss_dssp TTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHH
T ss_pred eecceEEEECCCCcEEEEeCCCCCHHHHHHHHHH
Confidence 3455889999999999999888888887777765
No 302
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=92.20 E-value=0.28 Score=35.79 Aligned_cols=31 Identities=16% Similarity=0.296 Sum_probs=24.7
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
..||||++|+++.++......+++++.|++.
T Consensus 114 ~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 114 VLYVLDKNKVIIAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp EEEEECTTCBEEEESCCGGGHHHHHHHHHHH
T ss_pred EEEEECCCCcEEEecCCHHHHHHHHHHHHHH
Confidence 6899999999999987665557777776653
No 303
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=91.97 E-value=0.27 Score=36.27 Aligned_cols=33 Identities=15% Similarity=0.202 Sum_probs=27.6
Q ss_pred ceeEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 207 NFTKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 207 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
.-..|+||++|+++.+|.....++++.+.|++.
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 139 (153)
T 2l5o_A 107 YPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTA 139 (153)
T ss_dssp SSEEEEECSSSCCCEEEESSCCHHHHHHHHHHH
T ss_pred cCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 347899999999999998877788888888764
No 304
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=91.92 E-value=3 Score=34.92 Aligned_cols=39 Identities=13% Similarity=0.144 Sum_probs=28.7
Q ss_pred cEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 66 HVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 66 k~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
++.+..|...+||+|...-..|+++..+ .++..+.+..+
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~---~~vi~l~~~v~ 81 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQK---GDVVGLSYHVD 81 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHH---TSSEEEEEECS
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhcc---CCeeeEEEEEE
Confidence 3577888899999999999998888664 24544455544
No 305
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=91.74 E-value=0.44 Score=35.02 Aligned_cols=51 Identities=22% Similarity=0.319 Sum_probs=35.5
Q ss_pred EEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCCCc--cchhhhhhhc
Q psy299 169 KFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANASP--ASLIPNIEKY 239 (240)
Q Consensus 169 ~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~ 239 (240)
.++.|.++.+...+.-...| ..||||++|+++.++.....+ +++.+.|++.
T Consensus 88 ~~~~d~~~~~~~~~~v~~~P--------------------~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~ 140 (152)
T 3gl3_A 88 TVAFDPKGQTPRLYGVKGMP--------------------TSFLIDRNGKVLLQHVGFRPADKEALEQQILAA 140 (152)
T ss_dssp EEEECTTCHHHHHTTCCSSS--------------------EEEEECTTSBEEEEEESCCTTTHHHHHHHHHHH
T ss_pred ceeECCcchhHHHcCCCCCC--------------------eEEEECCCCCEEEEEccCCCcCHHHHHHHHHHH
Confidence 37888887766555433222 679999999999998664333 6777777764
No 306
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=91.68 E-value=0.39 Score=32.41 Aligned_cols=32 Identities=13% Similarity=0.044 Sum_probs=21.9
Q ss_pred EEEEecC----CCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 69 VIVNVAS----RCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 69 lv~F~at----wCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
++.|+.+ |||.|......|++ .|+.+-.+.++
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~-------~gi~y~~idI~ 37 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTV-------KKQPFEFINIM 37 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHH-------TTCCEEEEESC
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHH-------cCCCEEEEEee
Confidence 4567889 99999977666654 35555555554
No 307
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=91.65 E-value=0.25 Score=37.25 Aligned_cols=54 Identities=17% Similarity=0.159 Sum_probs=33.7
Q ss_pred eEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCCCc----cchhhhhh
Q psy299 168 TKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANASP----ASLIPNIE 237 (240)
Q Consensus 168 ~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~ 237 (240)
..++.|.++.+...+.-.. .....=..||||++|+++.+|.....+ +++++.|+
T Consensus 88 ~~~~~d~~~~~~~~~~v~~----------------~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~ 145 (161)
T 3drn_A 88 FILVSDPDKKIRELYGAKG----------------FILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALK 145 (161)
T ss_dssp SEEEECTTSHHHHHTTCCC----------------SSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHH
T ss_pred ceEEECCcHHHHHHcCCCC----------------cCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHH
Confidence 3478888887665553321 000112689999999999998774444 44555544
No 308
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=91.51 E-value=0.066 Score=40.05 Aligned_cols=31 Identities=23% Similarity=0.294 Sum_probs=26.6
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
..||||++|+++.++.....++++.+.|++.
T Consensus 120 ~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 150 (158)
T 3eyt_A 120 SLLLIDKAGDLRAHHFGDVSELLLGAEIATL 150 (158)
T ss_dssp EEEEECTTSEEEEEEESCCCHHHHHHHHHHH
T ss_pred EEEEECCCCCEEEEEeCCCCHHHHHHHHHHH
Confidence 7899999999999998877888888877763
No 309
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=91.30 E-value=0.11 Score=43.71 Aligned_cols=40 Identities=10% Similarity=0.173 Sum_probs=31.9
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeec
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPC 106 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~ 106 (240)
.|+.+++.|+-+.||+|++..+.|+++.+. ..|.++.+.+
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~---~~Vr~i~~Pi 185 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLKE---NTVRMVVVGW 185 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHHH---CEEEEEECCC
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhhC---CcEEEEEeec
Confidence 478999999999999999999999976543 3466776643
No 310
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=91.24 E-value=0.14 Score=39.09 Aligned_cols=60 Identities=13% Similarity=0.187 Sum_probs=38.6
Q ss_pred EEEEc-CCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeecc-----CCCCccchhhhhhhcC
Q psy299 169 KFIVD-KNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHA-----ANASPASLIPNIEKYL 240 (240)
Q Consensus 169 ~~lID-~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 240 (240)
.++.| +++.+ ..+.-....... .+ .+.-..||||++|+++.+|. ....+++++++|++.|
T Consensus 106 ~~l~D~~~~~~-~~~gv~~~~~~~--------~g---~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~ll 171 (171)
T 2yzh_A 106 TVASDFRYRDM-EKYGVLIGEGAL--------KG---ILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKELI 171 (171)
T ss_dssp EEEECTTTCGG-GGGTCBBCSSTT--------TT---SBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC-
T ss_pred EEeecCccCcH-HHhCCEeccccc--------CC---ceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhhC
Confidence 37889 88888 655332221110 00 12448999999999999984 2444588999998754
No 311
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=91.22 E-value=0.31 Score=37.61 Aligned_cols=49 Identities=16% Similarity=0.224 Sum_probs=32.5
Q ss_pred EEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeec--------cCCCCccchhhhhhh
Q psy299 170 FIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERH--------AANASPASLIPNIEK 238 (240)
Q Consensus 170 ~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~--------~~~~~~~~~~~~~~~ 238 (240)
++.|.++.+...+.-...| ..||||++|+++.+. .....++++.+.|++
T Consensus 100 ~~~d~~~~~~~~~~v~~~P--------------------~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ 156 (188)
T 2cvb_A 100 YLLDETQEVAKAYRALRTP--------------------EVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEA 156 (188)
T ss_dssp EEECSSSHHHHHTTCCEES--------------------EEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHH
T ss_pred EEECCcchHHHHcCCCCCC--------------------eEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHH
Confidence 6778877665544322111 679999999999992 222356777777765
No 312
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=91.19 E-value=0.51 Score=33.61 Aligned_cols=31 Identities=16% Similarity=0.099 Sum_probs=26.0
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
..++||++|+++ ++.....++++.+.|++.|
T Consensus 104 ~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 104 AYAFVDPHGNVD-VVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp EEEEECTTCCEE-EEESCCCHHHHHHHHHHHC
T ss_pred eEEEECCCCCEE-EEecCCCHHHHHHHHHHHh
Confidence 789999999999 8877777888888887654
No 313
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=91.16 E-value=0.57 Score=37.03 Aligned_cols=39 Identities=5% Similarity=-0.157 Sum_probs=30.0
Q ss_pred cccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhccc
Q psy299 162 AIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRT 201 (240)
Q Consensus 162 ~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~ 201 (240)
++.++|+++++ .+|+.+....|..+.+.|.+.|++++++
T Consensus 173 gv~g~Pt~~i~-~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 211 (216)
T 2in3_A 173 GISGFPALVVE-SGTDRYLITTGYRPIEALRQLLDTWLQQ 211 (216)
T ss_dssp TCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHHHHHHH
T ss_pred CCcccceEEEE-ECCEEEEeccCCCCHHHHHHHHHHHHHh
Confidence 67888997665 4687655667777888899999988865
No 314
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=91.14 E-value=0.12 Score=37.01 Aligned_cols=49 Identities=22% Similarity=0.423 Sum_probs=37.3
Q ss_pred EEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCCCccchhhhhhh
Q psy299 170 FIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANASPASLIPNIEK 238 (240)
Q Consensus 170 ~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (240)
++.|.++.+...+.-...| ..|+||++|+++.++.....++++.+.|++
T Consensus 88 ~~~d~~~~~~~~~~v~~~P--------------------~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 88 VLVDPSGKLLETYGVRSYP--------------------TQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp EEECTTCHHHHHTTCCSSS--------------------EEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred EEECcchHHHHHcCcccCC--------------------eEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 6778877665555332222 789999999999999888888888888875
No 315
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=90.92 E-value=0.4 Score=34.72 Aligned_cols=48 Identities=17% Similarity=0.279 Sum_probs=34.7
Q ss_pred EEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCCCccchhhhhh
Q psy299 170 FIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANASPASLIPNIE 237 (240)
Q Consensus 170 ~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (240)
++.|.++.+...+.-...| ..|+||++|+++.++.....++++.+.|+
T Consensus 98 ~~~d~~~~~~~~~~v~~~P--------------------~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 98 IVLDSKGELMKEYHIITIP--------------------TSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp EEECSSSHHHHHTTCCEES--------------------EEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred EEEcCchhHHHhcCcCccC--------------------eEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 6788877665555332222 67999999999999887777777776653
No 316
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=90.81 E-value=0.16 Score=39.19 Aligned_cols=53 Identities=11% Similarity=0.043 Sum_probs=38.5
Q ss_pred EEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 170 FIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 170 ~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
++.|+++.+...+... .+..-=..||||++|+++.+|.....++++.+.|++.
T Consensus 127 ~~~d~~~~~~~~~~~~-----------------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 179 (183)
T 3lwa_A 127 SIYDPPFMTAASLGGV-----------------PASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPL 179 (183)
T ss_dssp EEECTTCGGGGGTTTC-----------------CTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHH
T ss_pred EEECCcchHHHHhccC-----------------CCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 7889988776655310 0111116899999999999998888888888888764
No 317
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=90.81 E-value=0.086 Score=40.73 Aligned_cols=49 Identities=14% Similarity=0.203 Sum_probs=36.0
Q ss_pred EEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCCCccchhhhhhh
Q psy299 170 FIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANASPASLIPNIEK 238 (240)
Q Consensus 170 ~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (240)
++.|+++.+...+.-...| ..||||++|+++.++.....++++.+.|++
T Consensus 116 ~~~d~~~~~~~~~~v~~~P--------------------~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 164 (176)
T 3kh7_A 116 SISDADGTLGLDLGVYGAP--------------------ETYLIDKQGIIRHKIVGVVDQKVWREQLAP 164 (176)
T ss_dssp EEEETTCHHHHHHTCCSSC--------------------EEEEECTTCBEEEEEESCCCHHHHHHHTHH
T ss_pred EEECCcchHHHHcCCCCCC--------------------eEEEECCCCeEEEEEcCCCCHHHHHHHHHH
Confidence 5778888766555332222 689999999999998777777777776665
No 318
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=90.77 E-value=0.5 Score=34.98 Aligned_cols=52 Identities=17% Similarity=0.138 Sum_probs=37.1
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcce
Q psy299 69 VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQF 131 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~f 131 (240)
+..|+.++||.|+.....|.+ .|+.+-.+.++ .++.+.++++++++..+..+
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~----~~~~~~~el~~~l~~~~~~~ 54 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEE-------HEIPFVERNIF----SEPLSIDEIKQILRMTEDGT 54 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCEEEEETT----TSCCCHHHHHHHHHTCSSCG
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCceEEEEcc----CCCccHHHHHHHHHHcCCCH
Confidence 556788999999987777665 35666555544 23457899999998776654
No 319
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=90.63 E-value=0.11 Score=38.43 Aligned_cols=31 Identities=13% Similarity=0.257 Sum_probs=26.4
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
..|+||++|+++.++.....++++.+.|++.
T Consensus 106 ~~~lid~~G~i~~~~~G~~~~~~l~~~l~~l 136 (151)
T 2f9s_A 106 TTFLINPEGKVVKVVTGTMTESMIHDYMNLI 136 (151)
T ss_dssp EEEEECTTSEEEEEEESCCCHHHHHHHHHHH
T ss_pred eEEEECCCCcEEEEEeCCCCHHHHHHHHHHH
Confidence 7899999999999988777778888887764
No 320
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=90.27 E-value=0.62 Score=34.27 Aligned_cols=49 Identities=12% Similarity=0.308 Sum_probs=33.8
Q ss_pred EEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCC--Cccchhhhhhh
Q psy299 170 FIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANA--SPASLIPNIEK 238 (240)
Q Consensus 170 ~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~ 238 (240)
++.|.++.+...+.-...| ..||||++|+++.++.... .++++.+.|++
T Consensus 90 ~~~d~~~~~~~~~~v~~~P--------------------~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ 140 (154)
T 3kcm_A 90 VLLDADKRVGKLYGTTGVP--------------------ETFVIDRHGVILKKVVGAMEWDHPEVIAFLNN 140 (154)
T ss_dssp EEECTTCHHHHHHTCCSBC--------------------EEEEECTTSBEEEEEESCCCTTSHHHHHHHHT
T ss_pred EEecCchHHHHHhCCCCCC--------------------eEEEECCCCcEEEEEcCCCccccHHHHHHHHH
Confidence 6778877665544322222 6899999999999976654 45677777765
No 321
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=90.23 E-value=0.13 Score=37.65 Aligned_cols=50 Identities=16% Similarity=0.260 Sum_probs=36.2
Q ss_pred EEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 170 FIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 170 ~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
+++|.++.+...+.-...| ..++||++|+++.++.....++++.+.|++.
T Consensus 94 ~~~d~~~~~~~~~~v~~~P--------------------~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 143 (148)
T 2b5x_A 94 IFVDSDHALTDAFENEYVP--------------------AYYVFDKTGQLRHFQAGGSGMKMLEKRVNRV 143 (148)
T ss_dssp EEECSSCHHHHHTCCCCSS--------------------EEEEECTTCBEEEEEESCSTTHHHHHHHHHH
T ss_pred eEECCchhHHHHhCCCCCC--------------------EEEEECCCCcEEEEecCCCCHHHHHHHHHHH
Confidence 6778777665554332222 7899999999999987766777787777764
No 322
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=90.22 E-value=0.54 Score=34.27 Aligned_cols=52 Identities=12% Similarity=0.072 Sum_probs=37.4
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcce
Q psy299 69 VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQF 131 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~f 131 (240)
+..|..++|+.|+.....|.+ +|+.+-.+.+. .++.+.++++++.+..++.+
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~~~~el~~~l~~~~~~~ 53 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNR-------HDVVFQEHNIM----TSPLSRDELLKILSYTENGT 53 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------TTCCEEEEETT----TSCCCHHHHHHHHHHCSSTH
T ss_pred EEEEeCCCCHHHHHHHHHHHH-------cCCCeEEEecc----cCCCcHHHHHHHHhhcCCCH
Confidence 456778999999987776654 45666555544 33468999999999877654
No 323
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=90.03 E-value=0.95 Score=38.81 Aligned_cols=41 Identities=10% Similarity=0.001 Sum_probs=31.5
Q ss_pred cEEEEEEecCCCCCcHHHHHHHHHHHHHHhh-cCcEEEEeec
Q psy299 66 HVLVIVNVASRCGYTGKHYKELVELDEKFRD-RGLRILAFPC 106 (240)
Q Consensus 66 k~vlv~F~atwCp~C~~~~~~L~~l~~~~~~-~~v~vi~Vs~ 106 (240)
+..++.|...||+.|...++.++++.+++++ .++.++.+..
T Consensus 246 ~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~ 287 (350)
T 1sji_A 246 GIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDP 287 (350)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECG
T ss_pred CcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECc
Confidence 3344558788998899999999999999985 3477777753
No 324
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=90.01 E-value=0.12 Score=44.47 Aligned_cols=55 Identities=11% Similarity=0.188 Sum_probs=36.2
Q ss_pred ceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCCCc----cchhhhhhh
Q psy299 167 FTKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANASP----ASLIPNIEK 238 (240)
Q Consensus 167 P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~ 238 (240)
|..+|.|++|++...|+-.... ...+ .+||||++|++++.| .++.| +++++.|++
T Consensus 78 ~fp~l~D~~~~v~~~ygv~~~~----------~~~r------~tfiId~~G~i~~~~-~~v~~~~h~~~~l~~~~~ 136 (322)
T 4eo3_A 78 KVTLLSDPEGILHEFFNVLENG----------KTVR------STFLIDRWGFVRKEW-RRVKVEGHVQEVKEALDR 136 (322)
T ss_dssp CSEEEECTTCHHHHHTTCEETT----------EECC------EEEEECTTSBEEEEE-ESCCSTTHHHHHHHHHHH
T ss_pred ceEEEEcCchHHHHhcCCCCCC----------cCcc------EEEEECCCCEEEEEE-eCCCccccHHHHHHHHhh
Confidence 4458999999987766421110 0112 789999999999987 45666 555555543
No 325
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=89.92 E-value=0.21 Score=37.88 Aligned_cols=37 Identities=8% Similarity=0.175 Sum_probs=28.6
Q ss_pred CCcceeEEEEcCCCCeeeeccCCC--CccchhhhhhhcC
Q psy299 204 IKWNFTKFIVDKNGAPVERHAANA--SPASLIPNIEKYL 240 (240)
Q Consensus 204 i~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 240 (240)
+.+.-..||||++|+++.+|.... .++++++.|++.|
T Consensus 133 ~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll 171 (174)
T 1xzo_A 133 VIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAS 171 (174)
T ss_dssp CCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHT
T ss_pred eeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHH
Confidence 455668899999999999976554 3588888887654
No 326
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=89.88 E-value=0.19 Score=37.62 Aligned_cols=31 Identities=13% Similarity=0.113 Sum_probs=26.2
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
..|+||++|+++.++.....++++.+.|++.
T Consensus 124 ~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~ 154 (164)
T 2h30_A 124 SWALIGKDGDVQRIVKGSINEAQALALIRNP 154 (164)
T ss_dssp EEEEECTTSCEEEEEESCCCHHHHHHHHHCT
T ss_pred eEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 7899999999999987777778888877764
No 327
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=89.37 E-value=0.11 Score=40.42 Aligned_cols=30 Identities=17% Similarity=0.203 Sum_probs=23.5
Q ss_pred eEEEEcCCCCeeeec---------cCCCCccchhhhhhh
Q psy299 209 TKFIVDKNGAPVERH---------AANASPASLIPNIEK 238 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~---------~~~~~~~~~~~~~~~ 238 (240)
..||||++|++++++ .....++++.+.|++
T Consensus 133 ~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ 171 (196)
T 2ywi_A 133 DFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDA 171 (196)
T ss_dssp EEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHH
T ss_pred eEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHH
Confidence 679999999999993 445566777777765
No 328
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=89.23 E-value=0.91 Score=39.40 Aligned_cols=99 Identities=10% Similarity=-0.016 Sum_probs=62.5
Q ss_pred cEEEEEEecCCCCCcHHHHHHHHHHHHHHhhc-CcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCCC
Q psy299 66 HVLVIVNVASRCGYTGKHYKELVELDEKFRDR-GLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDNA 144 (240)
Q Consensus 66 k~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~-~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~ 144 (240)
++.++.|...+|+.|...++.|+++.++++++ .+.++.+..+.+ ...+.-+.+.+|+.
T Consensus 248 ~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~-------~~~l~~~~~~fgl~-------------- 306 (367)
T 3us3_A 248 GIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDF-------PLLVPYWEKTFDID-------------- 306 (367)
T ss_dssp TEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGC-------TTTHHHHHHHHTCC--------------
T ss_pred CcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccc-------hhHHHHHHHhcCCC--------------
Confidence 45566688888888899999999999999985 488888765411 00011111122221
Q ss_pred chHHHHHhhhcCCcccccccccceEEEEcCCCC-e-EEeccC---CCCccchHHHHHHhcccCCC
Q psy299 145 HPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGV-P-VERHAA---NASPASLIPHIEILGRTSAI 204 (240)
Q Consensus 145 ~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~-I-v~~~~~---~~~~~~l~~~L~~ll~~~~i 204 (240)
...|...+++.... . .+.+.. ..+.+.|.+.++.+++|+--
T Consensus 307 -------------------~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~Gkl~ 352 (367)
T 3us3_A 307 -------------------LSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLEGEIN 352 (367)
T ss_dssp -------------------TTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHHHHTSSC
T ss_pred -------------------CCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHHHcCCcC
Confidence 01367788886654 2 222332 45677899999999988743
No 329
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=89.16 E-value=0.19 Score=38.73 Aligned_cols=31 Identities=16% Similarity=0.487 Sum_probs=24.4
Q ss_pred eEEEEcCCCCeeeeccC--CCCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAA--NASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~ 239 (240)
..||||++|+++.+|.. ....+++++.|++.
T Consensus 136 ~~~liD~~G~i~~~~~g~~~~~~~~l~~~ik~L 168 (170)
T 4hde_A 136 SFYLIDQNGKVMKKYSGISNTPYEDIIRDMKRL 168 (170)
T ss_dssp EEEEECTTSCEEEEEESSSSCCHHHHHHHHHHH
T ss_pred EEEEEcCCCeEEEEECCCCCCCHHHHHHHHHHH
Confidence 57999999999999863 34448888888763
No 330
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=89.06 E-value=0.26 Score=37.32 Aligned_cols=62 Identities=13% Similarity=0.118 Sum_probs=33.8
Q ss_pred eEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeecc-CC----CCccchhhhhhh
Q psy299 168 TKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHA-AN----ASPASLIPNIEK 238 (240)
Q Consensus 168 ~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~-~~----~~~~~~~~~~~~ 238 (240)
..++.|++|++...|.-......+. ...+..+ .+||||++|++++++- ++ ...++++++|+.
T Consensus 89 ~p~l~D~~~~v~~~ygv~~~~~~~~---~~~~~~p------~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 89 FTILSDYNREVVKKYNVAWEFPALP---GYVLAKR------AVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp SEEEECTTSHHHHHTTCEEECTTST---TCEEECE------EEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred EEEEEcCCcHHHHHcCCccccccCC---Ccceeee------eEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHH
Confidence 4478999998765542111100000 0001111 5899999999999852 22 223567776653
No 331
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=89.04 E-value=0.34 Score=38.73 Aligned_cols=50 Identities=16% Similarity=0.245 Sum_probs=32.9
Q ss_pred EEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCC---------CCccchhhhhhhc
Q psy299 170 FIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAAN---------ASPASLIPNIEKY 239 (240)
Q Consensus 170 ~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 239 (240)
++.|.++.+...+.-...| ..||||++|+++++...+ ...+++.++|++.
T Consensus 127 ~l~D~~~~~~~~~~v~~~P--------------------~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~l 185 (218)
T 3u5r_E 127 YLKDASQSVAKAYGAACTP--------------------DFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAV 185 (218)
T ss_dssp EEECTTCHHHHHHTCCEES--------------------EEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHH
T ss_pred EEECCccHHHHHcCCCCCC--------------------eEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHH
Confidence 7888877665544322111 789999999999885432 2356677777653
No 332
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=88.86 E-value=0.79 Score=33.80 Aligned_cols=48 Identities=21% Similarity=0.361 Sum_probs=28.9
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHH
Q psy299 69 VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTK 125 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~ 125 (240)
++.|..+|||.|......|.+... + ...+.++-|..+ .+.+.++++++
T Consensus 16 Vvvysk~~Cp~C~~ak~lL~~~~~-~-~v~~~~idid~~-------~d~~~~~~~l~ 63 (127)
T 3l4n_A 16 IIIFSKSTCSYSKGMKELLENEYQ-F-IPNYYIIELDKH-------GHGEELQEYIK 63 (127)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHEE-E-ESCCEEEEGGGS-------TTHHHHHHHHH
T ss_pred EEEEEcCCCccHHHHHHHHHHhcc-c-CCCcEEEEecCC-------CCHHHHHHHHH
Confidence 677888999999988777766310 0 113555555433 24455666554
No 333
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=88.80 E-value=0.15 Score=39.62 Aligned_cols=30 Identities=20% Similarity=0.374 Sum_probs=24.1
Q ss_pred eEEEEcCCCCeeeeccCCC----Cccchhhhhhh
Q psy299 209 TKFIVDKNGAPVERHAANA----SPASLIPNIEK 238 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~ 238 (240)
..||||++|+++.++.... .++++++.|++
T Consensus 121 ~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 154 (187)
T 1we0_A 121 GTFIIDPDGVIQAIEINADGIGRDASTLINKVKA 154 (187)
T ss_dssp EEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHH
T ss_pred EEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 7899999999999975433 56788888775
No 334
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=88.71 E-value=0.32 Score=36.43 Aligned_cols=34 Identities=15% Similarity=0.304 Sum_probs=22.0
Q ss_pred EEEEEEec----CCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 67 VLVIVNVA----SRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 67 ~vlv~F~a----twCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
.++|+.++ +|||.|......|++ .|+.+..+.++
T Consensus 36 ~Vvvy~ks~~~~~~Cp~C~~ak~~L~~-------~gv~y~~vdI~ 73 (135)
T 2wci_A 36 PILLYMKGSPKLPSCGFSAQAVQALAA-------CGERFAYVDIL 73 (135)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHT-------TCSCCEEEEGG
T ss_pred CEEEEEEecCCCCCCccHHHHHHHHHH-------cCCceEEEECC
Confidence 34454444 799999977776654 35666666554
No 335
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=88.62 E-value=0.28 Score=37.63 Aligned_cols=35 Identities=3% Similarity=-0.073 Sum_probs=28.3
Q ss_pred CCcceeEEEEcCCCCeeee-ccCCCCccchhhhhhh
Q psy299 204 IKWNFTKFIVDKNGAPVER-HAANASPASLIPNIEK 238 (240)
Q Consensus 204 i~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~ 238 (240)
+...-..||||++|+++.+ ++.+..++++.++|++
T Consensus 124 ~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~ 159 (170)
T 3me7_A 124 FIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRL 159 (170)
T ss_dssp EECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHH
T ss_pred cccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHH
Confidence 4455579999999999987 5556778999999886
No 336
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=88.57 E-value=0.66 Score=34.18 Aligned_cols=27 Identities=15% Similarity=0.332 Sum_probs=21.9
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhh
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEK 238 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (240)
..||||++|+++.++. .++++.+.|++
T Consensus 119 ~~~lid~~G~i~~~~~---~~~~l~~~l~~ 145 (150)
T 3fw2_A 119 ANILLSSDGKILAKNL---RGEELKKKIEN 145 (150)
T ss_dssp EEEEECTTSBEEEESC---CHHHHHHHHHH
T ss_pred eEEEECCCCEEEEccC---CHHHHHHHHHH
Confidence 7899999999999995 56666666665
No 337
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=88.55 E-value=0.32 Score=36.80 Aligned_cols=55 Identities=13% Similarity=0.042 Sum_probs=35.9
Q ss_pred EEEc-CCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeecc---CCCCc--cchhhhhhh
Q psy299 170 FIVD-KNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHA---ANASP--ASLIPNIEK 238 (240)
Q Consensus 170 ~lID-~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~---~~~~~--~~~~~~~~~ 238 (240)
++.| +++.+...+.-..... + .+.-..||||++|+++++|. ....| ++++++|++
T Consensus 102 ~l~D~~~~~~~~~~gv~~~~~-----------g---~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 102 MLSDYFDHSFGRDYALLINEW-----------H---LLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp EEECTTTCHHHHHHTCBCTTT-----------C---SBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred EecCCchhHHHHHhCCccccC-----------C---ceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 6788 7777665553221110 0 12348999999999999973 33344 788888875
No 338
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=88.51 E-value=0.18 Score=40.43 Aligned_cols=57 Identities=12% Similarity=0.011 Sum_probs=35.8
Q ss_pred ceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCC----Cccchhhhhhh
Q psy299 167 FTKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANA----SPASLIPNIEK 238 (240)
Q Consensus 167 P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~ 238 (240)
+..++.|+++.+...+.-.. +. + ...-..||||++|++++++-... ..+++++.|++
T Consensus 117 ~fp~l~D~~~~~~~~ygv~~--~~----------g---~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~ 177 (213)
T 2i81_A 117 KHTLLSDITKSISKDYNVLF--DD----------S---VSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDA 177 (213)
T ss_dssp SSEEEECTTSHHHHHTTCEE--TT----------T---EECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred CceEEECCchHHHHHhCCcc--cc----------C---CcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 34578898887666553221 00 0 12237899999999999974322 24677777764
No 339
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=88.42 E-value=0.26 Score=37.25 Aligned_cols=31 Identities=19% Similarity=0.265 Sum_probs=23.9
Q ss_pred eEEEEcCCCCeeeeccC-----CCCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAA-----NASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 239 (240)
..||||++|+++.+|.. ...+++++++|++.
T Consensus 130 ~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 130 SVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp EEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHH
T ss_pred EEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHh
Confidence 78999999999999732 22347888888764
No 340
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=88.33 E-value=0.31 Score=37.30 Aligned_cols=62 Identities=13% Similarity=0.097 Sum_probs=35.9
Q ss_pred ceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccC-C----CCccchhhhhhh
Q psy299 167 FTKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAA-N----ASPASLIPNIEK 238 (240)
Q Consensus 167 P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~-~----~~~~~~~~~~~~ 238 (240)
|..++.|++|++...|.-......- ...+..+ .+||||++|+++++|-. + ...+++++.|++
T Consensus 91 ~fp~l~D~~~~v~~~ygv~~~~~~~----~~~~~~p------~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 157 (164)
T 4gqc_A 91 AFNLLSDYNREVIKLYNVYHEDLKG----LKMVAKR------AVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANK 157 (164)
T ss_dssp CSEEEECTTSHHHHHTTCEEEEETT----EEEEECC------EEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHH
T ss_pred ccceeecCchHHHHHcCCccccccc----CcCCeee------EEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHH
Confidence 3448899999876655321100000 0001112 58999999999998532 1 234788888765
No 341
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=88.14 E-value=0.4 Score=36.78 Aligned_cols=60 Identities=5% Similarity=-0.059 Sum_probs=35.2
Q ss_pred eEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeecc-CCC----Cccchhhhhhh
Q psy299 168 TKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHA-ANA----SPASLIPNIEK 238 (240)
Q Consensus 168 ~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~-~~~----~~~~~~~~~~~ 238 (240)
..++.|.++.+...+.-....... ...+.-..||||++|+++.++. ... ..+++++++.+
T Consensus 101 ~~~l~D~~~~~~~~~gv~~~~~~~-----------~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~~ 165 (175)
T 1xvq_A 101 VMPASAFRDSFGEDYGVTIADGPM-----------AGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALGA 165 (175)
T ss_dssp EEEEECTTSSHHHHTTCBBCSSTT-----------TTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHHH
T ss_pred ceEeeCCHHHHHHHhCCccccccc-----------CCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHHh
Confidence 347888887766655332221110 0123447999999999999984 232 22555555554
No 342
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=88.02 E-value=0.28 Score=36.67 Aligned_cols=27 Identities=19% Similarity=0.245 Sum_probs=21.5
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhh
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPN 235 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (240)
..||||++|+++.++......++.+..
T Consensus 116 ~~~lid~~G~i~~~~~g~~~~e~~~~~ 142 (152)
T 2lrt_A 116 SVFLVNRNNELSARGENIKDLDEAIKK 142 (152)
T ss_dssp EEEEEETTTEEEEETTTCSCHHHHHHH
T ss_pred eEEEECCCCeEEEecCCHHHHHHHHHH
Confidence 899999999999998877666554443
No 343
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=87.99 E-value=0.37 Score=34.76 Aligned_cols=50 Identities=10% Similarity=0.024 Sum_probs=33.9
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCc
Q psy299 69 VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNV 129 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~ 129 (240)
+..|..++|+.|+.....|++ +|+.+-.+.++ .+..+.+.++++.++.|+
T Consensus 2 i~iY~~~~C~~C~kak~~L~~-------~gi~~~~~di~----~~~~~~~~l~~~~~~~g~ 51 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE-------HKVAYDFHDYK----AVGIDREHLRRWCAEHGW 51 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------TTCCEEEEEHH----HHCCCHHHHHHHHHHHCH
T ss_pred EEEEECCCChHHHHHHHHHHH-------CCCceEEEeec----CCCCCHHHHHHHHHhCCh
Confidence 456678999999987777665 35555444433 123477999999887773
No 344
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=87.99 E-value=0.17 Score=38.20 Aligned_cols=30 Identities=30% Similarity=0.467 Sum_probs=24.9
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhh
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEK 238 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (240)
..|+||++|+++.++.....++++.+.|++
T Consensus 128 ~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 157 (168)
T 2b1k_A 128 ETFLIDGNGIIRYRHAGDLNPRVWEEEIKP 157 (168)
T ss_dssp EEEEECTTSBEEEEEESCCCHHHHHHTTHH
T ss_pred EEEEECCCCeEEEEEeCCCCHHHHHHHHHH
Confidence 689999999999998877777777666654
No 345
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=87.82 E-value=0.36 Score=36.59 Aligned_cols=30 Identities=10% Similarity=0.237 Sum_probs=22.4
Q ss_pred eEEEEcCCCCeeeecc-CC----CCccchhhhhhh
Q psy299 209 TKFIVDKNGAPVERHA-AN----ASPASLIPNIEK 238 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~-~~----~~~~~~~~~~~~ 238 (240)
..||||++|+++++|- ++ ...+++++.|++
T Consensus 131 ~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 131 AVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp EEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred EEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 7899999999999943 22 233778888765
No 346
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=87.68 E-value=0.88 Score=33.16 Aligned_cols=53 Identities=13% Similarity=0.218 Sum_probs=37.6
Q ss_pred EEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcce
Q psy299 68 LVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQF 131 (240)
Q Consensus 68 vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~f 131 (240)
++..|..++|+.|+.....|++ +|+.+-.+.+. .++.+.+++++++++.|.++
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~~~~eL~~~l~~~g~~~ 56 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAELDD-------LAWDYDAIDIK----KNPPAASLIRNWLENSGLEL 56 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHHHH-------HTCCEEEEETT----TSCCCHHHHHHHHHHSCCCG
T ss_pred eEEEEeCCCChHHHHHHHHHHH-------cCCceEEEEec----cCchhHHHHHHHHHHcCCCH
Confidence 3556678999999988777654 35555444433 33468999999999988754
No 347
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=87.32 E-value=0.44 Score=37.33 Aligned_cols=41 Identities=20% Similarity=0.254 Sum_probs=32.7
Q ss_pred CCcEEEEEEecCCCCCcHHHHHHHHHHHHHH-hhcCcEEEEee
Q psy299 64 KGHVLVIVNVASRCGYTGKHYKELVELDEKF-RDRGLRILAFP 105 (240)
Q Consensus 64 ~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~-~~~~v~vi~Vs 105 (240)
.++++|+.|.-..||+|....+.+..+.+++ .+ ++.++.-.
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g-~v~~v~r~ 54 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGED-NVTVRIRL 54 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTT-TEEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-CEEEEEEE
Confidence 4688899999999999999999998888776 33 47776544
No 348
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=87.09 E-value=0.18 Score=39.55 Aligned_cols=30 Identities=20% Similarity=0.240 Sum_probs=23.6
Q ss_pred eEEEEcCCCCeeeeccCCC----Cccchhhhhhh
Q psy299 209 TKFIVDKNGAPVERHAANA----SPASLIPNIEK 238 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~ 238 (240)
..||||++|+++.++.... .++++++.|++
T Consensus 134 ~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 167 (195)
T 2bmx_A 134 VTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDA 167 (195)
T ss_dssp EEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred eEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 6899999999999975433 45777777765
No 349
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=87.08 E-value=0.25 Score=36.45 Aligned_cols=31 Identities=10% Similarity=0.248 Sum_probs=25.8
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
..|+||++|+++.++.....++++.+.|++.
T Consensus 111 ~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 141 (152)
T 2lja_A 111 RFILLDRDGKIISANMTRPSDPKTAEKFNEL 141 (152)
T ss_dssp CEEEECTTSCEEESSCCCTTCHHHHHHHHHH
T ss_pred EEEEECCCCeEEEccCCCCCHHHHHHHHHHH
Confidence 5799999999999998777777787777653
No 350
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=86.92 E-value=0.27 Score=36.34 Aligned_cols=30 Identities=20% Similarity=0.347 Sum_probs=24.7
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhh
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEK 238 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (240)
..|+||++|+++.++.....++++.+.|++
T Consensus 120 ~~~~id~~G~i~~~~~g~~~~~~l~~~l~~ 149 (156)
T 1kng_A 120 ETFVVGREGTIVYKLVGPITPDNLRSVLLP 149 (156)
T ss_dssp EEEEECTTSBEEEEEESCCCHHHHHHTHHH
T ss_pred eEEEEcCCCCEEEEEeCCCCHHHHHHHHHH
Confidence 689999999999998777677777776665
No 351
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=86.80 E-value=0.38 Score=35.56 Aligned_cols=32 Identities=25% Similarity=0.285 Sum_probs=28.3
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
..||||++|+++.++.....++++.+.|++++
T Consensus 112 ~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~ 143 (154)
T 3ia1_A 112 WTFVVDREGKVVALFAGRAGREALLDALLLAG 143 (154)
T ss_dssp EEEEECTTSEEEEEEESBCCHHHHHHHHHHTT
T ss_pred EEEEECCCCCEEEEEcCCCCHHHHHHHHHhcc
Confidence 67999999999999988888899999888753
No 352
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=86.28 E-value=0.25 Score=39.82 Aligned_cols=56 Identities=11% Similarity=0.052 Sum_probs=34.2
Q ss_pred eEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCCCc----cchhhhhh
Q psy299 168 TKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANASP----ASLIPNIE 237 (240)
Q Consensus 168 ~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~ 237 (240)
..++.|.++.+...+.-.... .-...-..||||++|+++.++...... +++++.|+
T Consensus 135 ~~~l~D~~~~~~~~ygv~~~~--------------~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~ 194 (222)
T 3ztl_A 135 IPLLADRKQEISKAYGVFDEE--------------DGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLD 194 (222)
T ss_dssp SCEEECSSSHHHHHTTCBCTT--------------TSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHH
T ss_pred eeEEeCCchHHHHHcCCeecC--------------CCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 448889888776655332111 001223799999999999997554333 45555554
No 353
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=86.11 E-value=0.17 Score=39.71 Aligned_cols=56 Identities=9% Similarity=0.016 Sum_probs=34.8
Q ss_pred eEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCC----Cccchhhhhhh
Q psy299 168 TKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANA----SPASLIPNIEK 238 (240)
Q Consensus 168 ~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~ 238 (240)
..++.|.++.+...+.-.... + ..--..||||++|+++.++.... .++++++.|++
T Consensus 99 ~~~~~d~~~~~~~~~~v~~~~------------g---~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 158 (198)
T 1zof_A 99 FPMVADITKSISRDYDVLFEE------------A---IALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDA 158 (198)
T ss_dssp SCEEECTTSHHHHHTTCEETT------------T---EECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHH
T ss_pred eEEEECCchHHHHHhCCcccC------------C---cccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 347888887766554322100 0 01227899999999999985443 34667766654
No 354
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=86.06 E-value=0.52 Score=34.79 Aligned_cols=30 Identities=7% Similarity=0.010 Sum_probs=26.2
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhh
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEK 238 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (240)
..||||++|+++.+|.....++++.+.|++
T Consensus 108 ~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 137 (151)
T 3raz_A 108 FTVVEAPKCGYRQTITGEVNEKSLTDAVKL 137 (151)
T ss_dssp EEEEEETTTTEEEECCSCCCHHHHHHHHHH
T ss_pred EEEEECCCCcEEEEECCCCCHHHHHHHHHH
Confidence 689999999999999888888887777765
No 355
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=85.75 E-value=0.57 Score=34.02 Aligned_cols=50 Identities=20% Similarity=0.171 Sum_probs=34.2
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCc
Q psy299 69 VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNV 129 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~ 129 (240)
+..|..++|+.|+.....|.+ +|+.+-.+.++ .+..+.+.++++.++.|+
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~----~~~~~~~~l~~~~~~~g~ 56 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLED-------HGIDYTFHDYK----KEGLDAETLDRFLKTVPW 56 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCEEEEEHH----HHCCCHHHHHHHHHHSCG
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCcEEEEeee----CCCCCHHHHHHHHHHcCh
Confidence 456678999999988777766 24444444332 112467999999988884
No 356
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=85.67 E-value=0.51 Score=36.40 Aligned_cols=60 Identities=8% Similarity=0.160 Sum_probs=34.4
Q ss_pred EEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCCCc----cchhhhhhh
Q psy299 170 FIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANASP----ASLIPNIEK 238 (240)
Q Consensus 170 ~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~ 238 (240)
++.|+++.+...+.-...+... ........-.+||||++|+++.+| ....+ +++++.|++
T Consensus 112 ~l~D~~~~~~~~~gv~~~~~~~--------g~~~~~~~p~~~lID~~G~I~~~~-~~~~~~~~~~~il~~l~~ 175 (179)
T 3ixr_A 112 LVSDSDAILCKAFDVIKEKTMY--------GRQVIGIERSTFLIGPTHRIVEAW-RQVKVPGHAEEVLNKLKA 175 (179)
T ss_dssp EEECTTCHHHHHTTCEEEECCC----------CEEEECCEEEEECTTSBEEEEE-CSCCSTTHHHHHHHHHHH
T ss_pred EEECCchHHHHHcCCccccccc--------CcccCCcceEEEEECCCCEEEEEE-cCCCCCCCHHHHHHHHHH
Confidence 7889988776555322111100 000011245799999999999998 34344 555555553
No 357
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=85.61 E-value=0.94 Score=33.38 Aligned_cols=27 Identities=26% Similarity=0.370 Sum_probs=20.7
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhh
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEK 238 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (240)
..||||++|+++.++- .++++.+.|++
T Consensus 112 ~~~lid~~G~i~~~~~---~~~~l~~~l~~ 138 (152)
T 2lrn_A 112 HIILVDPEGKIVAKEL---RGDDLYNTVEK 138 (152)
T ss_dssp EEEEECTTSEEEEECC---CTTHHHHHHHH
T ss_pred eEEEECCCCeEEEeeC---CHHHHHHHHHH
Confidence 6799999999999983 45566666654
No 358
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=85.47 E-value=7.7 Score=28.12 Aligned_cols=35 Identities=20% Similarity=0.010 Sum_probs=26.8
Q ss_pred CcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEe
Q psy299 65 GHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAF 104 (240)
Q Consensus 65 gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~V 104 (240)
.++++|-|+.+||..| .+.+.+..+.+ + .+.+..+
T Consensus 39 ~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~-d~~F~~t 73 (124)
T 2l4c_A 39 TEVAVIGFFQDLEIPA---VPILHSMVQKF-P-GVSFGIS 73 (124)
T ss_dssp SSEEEEEECSCTTSTH---HHHHHHHHHHC-T-TSEEEEE
T ss_pred CCCEEEEEECCCCChh---HHHHHHHHHhC-C-CceEEEE
Confidence 5789999999999999 45667777777 3 4777555
No 359
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=85.32 E-value=0.31 Score=38.41 Aligned_cols=57 Identities=9% Similarity=0.026 Sum_probs=34.6
Q ss_pred eEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCCC----ccchhhhhhh
Q psy299 168 TKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANAS----PASLIPNIEK 238 (240)
Q Consensus 168 ~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~~~~~~ 238 (240)
..++.|.++.+...+.-..... -+..+ ..||||++|++++++..... .+++++.|++
T Consensus 102 ~p~l~D~~~~~~~~ygv~~~~~--------g~~~P------~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~ 162 (202)
T 1uul_A 102 IPILADKTKCIMKSYGVLKEED--------GVAYR------GLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKA 162 (202)
T ss_dssp SCEEECTTCHHHHHHTCEETTT--------TEECE------EEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred eeEEECCchHHHHHcCCccCCC--------Cceee------EEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHH
Confidence 3478888877665553221110 01111 68999999999999644332 3677777664
No 360
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=85.04 E-value=5.7 Score=32.14 Aligned_cols=96 Identities=11% Similarity=-0.025 Sum_probs=55.8
Q ss_pred CcEEEEEEecCCCCCcH----HHHHHHHHHHHHHhhc--CcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeee
Q psy299 65 GHVLVIVNVASRCGYTG----KHYKELVELDEKFRDR--GLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKIN 138 (240)
Q Consensus 65 gk~vlv~F~atwCp~C~----~~~~~L~~l~~~~~~~--~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d 138 (240)
+++++|.|....+..+. .....+.++.++++++ .+.++.+..+ .....++.+|+..
T Consensus 129 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~-----------~~~~~~~~fgl~~------- 190 (252)
T 2h8l_A 129 GKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRK-----------TFSHELSDFGLES------- 190 (252)
T ss_dssp SSSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETT-----------TTHHHHGGGTCCC-------
T ss_pred CCCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchH-----------HHHHHHHHcCCCC-------
Confidence 55666666644443222 2467778888888864 3777777533 1112233333310
Q ss_pred cCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccc--hHHHHHHhcccC
Q psy299 139 VNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPAS--LIPHIEILGRTS 202 (240)
Q Consensus 139 ~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~--l~~~L~~ll~~~ 202 (240)
. ....|...++|.+|+ .+.+.+..+.+. |.+.++.+++++
T Consensus 191 -~----------------------~~~~P~v~i~~~~~~-ky~~~~~~t~~~~~i~~F~~~~~~Gk 232 (252)
T 2h8l_A 191 -T----------------------AGEIPVVAIRTAKGE-KFVMQEEFSRDGKALERFLQDYFDGN 232 (252)
T ss_dssp -C----------------------SCSSCEEEEECTTSC-EEECCSCCCTTSHHHHHHHHHHHHTC
T ss_pred -c----------------------cCCCCEEEEEeCcCc-EecCCcccCcchHHHHHHHHHHHCCC
Confidence 0 001267678877665 444545566777 999999999875
No 361
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=84.92 E-value=0.4 Score=38.52 Aligned_cols=58 Identities=12% Similarity=0.008 Sum_probs=35.2
Q ss_pred ceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCC----Cccchhhhhhh
Q psy299 167 FTKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANA----SPASLIPNIEK 238 (240)
Q Consensus 167 P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~ 238 (240)
+..++.|.++.+...+.-..... -+..+ ..||||++|++++++.... ..+++++.|++
T Consensus 121 ~fp~l~D~~~~i~~~ygv~~~~~--------g~~~P------~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~ 182 (220)
T 1zye_A 121 NIALLSDLTKQISRDYGVLLEGP--------GLALR------GLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKA 182 (220)
T ss_dssp SSEEEECTTSHHHHHTTCEETTT--------TEECE------EEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred ceEEEECCcHHHHHHhCCeecCC--------Ccccc------eEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 34488898887765553221100 01111 7899999999999864332 33677777664
No 362
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=84.92 E-value=0.34 Score=37.69 Aligned_cols=57 Identities=14% Similarity=0.047 Sum_probs=34.7
Q ss_pred ceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCC----Cccchhhhhhh
Q psy299 167 FTKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANA----SPASLIPNIEK 238 (240)
Q Consensus 167 P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~ 238 (240)
+..++.|.++.+...+.-.. +. -+..+ ..||||++|++++++.... ..++++..|++
T Consensus 96 ~~~~l~D~~~~~~~~~gv~~--~~-------g~~~P------~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 156 (192)
T 2h01_A 96 KHTLISDISKSIARSYDVLF--NE-------SVALR------AFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDA 156 (192)
T ss_dssp SSEEEECTTSHHHHHTTCEE--TT-------TEECC------EEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHH
T ss_pred CcCeEECCcHHHHHHhCCcC--cC-------Cceee------EEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHH
Confidence 34578898877665553221 00 01122 6999999999999974422 24666666654
No 363
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=84.92 E-value=2.2 Score=30.71 Aligned_cols=29 Identities=17% Similarity=0.352 Sum_probs=23.1
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
..++||++|+++.++. .++++.+.|++.|
T Consensus 117 ~~~lid~~G~i~~~~~---~~~~l~~~l~~ll 145 (148)
T 3fkf_A 117 TNILLSPTGKILARDI---QGEALTGKLKELL 145 (148)
T ss_dssp EEEEECTTSBEEEESC---CHHHHHHHHHHHC
T ss_pred EEEEECCCCeEEEecC---CHHHHHHHHHHHH
Confidence 6899999999999987 5666777766543
No 364
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=84.85 E-value=2.4 Score=30.70 Aligned_cols=16 Identities=19% Similarity=0.449 Sum_probs=12.6
Q ss_pred CCCCCcHHHHHHHHHH
Q psy299 75 SRCGYTGKHYKELVEL 90 (240)
Q Consensus 75 twCp~C~~~~~~L~~l 90 (240)
+|||+|......|++.
T Consensus 29 p~Cp~C~~ak~lL~~~ 44 (121)
T 3gx8_A 29 PKCGFSRATIGLLGNQ 44 (121)
T ss_dssp BCTTHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHc
Confidence 3999999887777663
No 365
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=84.83 E-value=1 Score=32.12 Aligned_cols=26 Identities=19% Similarity=0.474 Sum_probs=17.8
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 75 SRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 75 twCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
+|||.|......|.+ .|+.+..+.++
T Consensus 29 ~~Cp~C~~ak~~L~~-------~gi~y~~~di~ 54 (111)
T 3zyw_A 29 PRCGFSKQMVEILHK-------HNIQFSSFDIF 54 (111)
T ss_dssp BSSHHHHHHHHHHHH-------TTCCCEEEEGG
T ss_pred CcchhHHHHHHHHHH-------cCCCeEEEECc
Confidence 899999988777664 34555555544
No 366
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=84.71 E-value=1.3 Score=35.34 Aligned_cols=48 Identities=10% Similarity=-0.077 Sum_probs=35.2
Q ss_pred cCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHH-HHhh-cCcEEEEeec
Q psy299 59 PLSTYKGHVLVIVNVASRCGYTGKHYKELVELDE-KFRD-RGLRILAFPC 106 (240)
Q Consensus 59 ~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~-~~~~-~~v~vi~Vs~ 106 (240)
.+.+-.++++|+.|.-.-||+|+...+.+....+ +|-+ ..+.++...+
T Consensus 9 ~~G~~~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 9 LLGNPAAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp EESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred eecCCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 3455568899999999999999999887765555 7732 2477776543
No 367
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=84.53 E-value=1.2 Score=32.37 Aligned_cols=52 Identities=10% Similarity=0.100 Sum_probs=36.4
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcce
Q psy299 69 VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQF 131 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~f 131 (240)
+..|..++|+.|+.....|.+ +|+.+-.+.+. .++.+.+++.++++..|.++
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~~~~eL~~~l~~~g~~~ 57 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIE-------NNIEYTNRLIV----DDNPTVEELKAWIPLSGLPV 57 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETT----TTCCCHHHHHHHHHHHTSCG
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCceEEEecc----cCcCCHHHHHHHHHHcCCCH
Confidence 455678999999988777654 35444444332 23468999999999888654
No 368
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=84.42 E-value=0.38 Score=38.84 Aligned_cols=56 Identities=16% Similarity=0.139 Sum_probs=35.4
Q ss_pred eEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCC----CCccchhhhhhh
Q psy299 168 TKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAAN----ASPASLIPNIEK 238 (240)
Q Consensus 168 ~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~----~~~~~~~~~~~~ 238 (240)
..++.|+++.+...+.-. . .. + ...-..||||++|+++.++... ...+++++.|++
T Consensus 122 fp~l~D~~~~~~~~ygv~-~-~~----------g---~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~ 181 (221)
T 2c0d_A 122 FTLVSDINKDISKNYNVL-Y-DN----------S---FALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDS 181 (221)
T ss_dssp SEEEECTTSHHHHHTTCE-E-TT----------T---EECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred eEEEECCchHHHHHcCCc-c-cC----------C---CccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 347889888766555321 1 00 0 1234899999999999997432 234677777764
No 369
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=83.88 E-value=0.56 Score=34.90 Aligned_cols=33 Identities=18% Similarity=0.120 Sum_probs=27.2
Q ss_pred ceeEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 207 NFTKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 207 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
-=..||||++|+++.++.....++++.+.|++.
T Consensus 117 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 149 (165)
T 3or5_A 117 IPTSFVIDASGNVSGVIVGPRSKADFDRIVKMA 149 (165)
T ss_dssp SSEEEEECTTSBEEEEECSCCCHHHHHHHHHHH
T ss_pred CCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 337899999999999998777788888877763
No 370
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=83.83 E-value=0.44 Score=38.70 Aligned_cols=59 Identities=12% Similarity=0.049 Sum_probs=36.6
Q ss_pred cceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeee--ccCCCCc--cchhhhhhh
Q psy299 166 NFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVER--HAANASP--ASLIPNIEK 238 (240)
Q Consensus 166 ~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~--~~~~~~~--~~~~~~~~~ 238 (240)
.|..++-|++|++...|.-..+... +..+ .+||||++|++++. |...+-+ +|++..|++
T Consensus 116 l~fpllsD~~~~vak~YGv~~~~~g--------~~~R------~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~A 178 (216)
T 3sbc_A 116 INIPLLADTNHSLSRDYGVLIEEEG--------VALR------GLFIIDPKGVIRHITINDLPVGRNVDEALRLVEA 178 (216)
T ss_dssp CSSCEEECTTSHHHHHHTCEETTTT--------EECE------EEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred cccceEeCCCCHHHHHcCCeeccCC--------ceee------EEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHH
Confidence 3455899999998877753222111 2222 69999999999887 3333322 556555543
No 371
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=83.79 E-value=0.34 Score=39.67 Aligned_cols=57 Identities=9% Similarity=0.073 Sum_probs=34.5
Q ss_pred eEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCCCc----cchhhhhhh
Q psy299 168 TKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANASP----ASLIPNIEK 238 (240)
Q Consensus 168 ~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~ 238 (240)
..++.|.++.+...+.-...... +..+ ..||||++|+++.++.....+ +++++.|++
T Consensus 143 fp~l~D~~~~v~~~ygv~~~~~g--------~~~p------~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~ 203 (240)
T 3qpm_A 143 IPLLSDLTHQISKDYGVYLEDQG--------HTLR------GLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQA 203 (240)
T ss_dssp SCEEECTTSHHHHHTTCEETTTT--------EECE------EEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred eeEEeCchHHHHHHhCCccccCC--------Cccc------eEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 34899999877665543211100 1111 689999999999996543333 455555543
No 372
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=83.44 E-value=0.84 Score=33.97 Aligned_cols=51 Identities=25% Similarity=0.409 Sum_probs=33.8
Q ss_pred eEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCCCc--cchhhhhhh
Q psy299 168 TKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANASP--ASLIPNIEK 238 (240)
Q Consensus 168 ~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~ 238 (240)
..++.|.++.+...+.-...| ..||||++|+++.++...... +++++.|++
T Consensus 97 ~~~~~d~~~~~~~~~~v~~~P--------------------~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~ 149 (158)
T 3hdc_A 97 FNFLSDATGQVQQRYGANRLP--------------------DTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKS 149 (158)
T ss_dssp CEEEECTTSHHHHHTTCCSSS--------------------EEEEECTTSBEEEEEESCCCTTSHHHHHHHHT
T ss_pred ceEEECchHHHHHHhCCCCcc--------------------eEEEEcCCCCEEEEEeCCCccchHHHHHHHHh
Confidence 347778877665555332222 679999999999997655433 666666654
No 373
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=83.37 E-value=0.6 Score=35.80 Aligned_cols=31 Identities=23% Similarity=0.284 Sum_probs=24.4
Q ss_pred eEEEEcCCCCeeeeccCCCC--ccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAANAS--PASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~ 239 (240)
..||||++|+++.+|..... ++++.+.|++.
T Consensus 146 ~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 178 (186)
T 1jfu_A 146 TSVLVDPQGCEIATIAGPAEWASEDALKLIRAA 178 (186)
T ss_dssp EEEEECTTSBEEEEEESCCCTTSHHHHHHHHHH
T ss_pred EEEEECCCCCEEEEEecCCccCHHHHHHHHHHH
Confidence 78999999999999865543 57777777653
No 374
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=83.08 E-value=0.4 Score=38.98 Aligned_cols=58 Identities=12% Similarity=0.062 Sum_probs=36.9
Q ss_pred ceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeecc--CCCCc--cchhhhhhh
Q psy299 167 FTKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHA--ANASP--ASLIPNIEK 238 (240)
Q Consensus 167 P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~--~~~~~--~~~~~~~~~ 238 (240)
|..+|-|++|+|...|.-..+.. -+..+ .+||||++|++++.+- ..+-. +|++..|++
T Consensus 121 ~fpllsD~~~~va~~yGv~~~~~--------g~~~R------~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~a 182 (219)
T 3tue_A 121 AIPILADKTKNIARSYGVLEESQ--------GVAYR------GLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEA 182 (219)
T ss_dssp SSCEEECTTSHHHHHTTCEETTT--------TEECE------EEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred ccccccCcccHHHHHcCCcccCC--------CeeEE------EEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHH
Confidence 45589999999887774322211 12222 6899999999998753 33322 666666654
No 375
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=82.32 E-value=0.34 Score=36.51 Aligned_cols=35 Identities=17% Similarity=0.332 Sum_probs=28.8
Q ss_pred CcceeEEEEcCCCCeeeeccCCC--CccchhhhhhhcC
Q psy299 205 KWNFTKFIVDKNGAPVERHAANA--SPASLIPNIEKYL 240 (240)
Q Consensus 205 ~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 240 (240)
.+.-..|||| +|+++.+|.... .++++.+.|++.|
T Consensus 136 ~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~ll 172 (172)
T 2k6v_A 136 DHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQALL 172 (172)
T ss_dssp EECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHHCC
T ss_pred ecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHHhC
Confidence 3445789999 999999987766 7889999998765
No 376
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=81.88 E-value=1.5 Score=32.86 Aligned_cols=51 Identities=8% Similarity=0.179 Sum_probs=35.8
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcc
Q psy299 69 VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQ 130 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~ 130 (240)
+..|..++|+.|+.....|.+ +|+.+-.+.+. .++.+.++++++.++.+++
T Consensus 4 itiY~~p~C~~crkak~~L~~-------~gi~~~~idi~----~~~~~~~eL~~~~~~~g~p 54 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIRN-------SGTEPTIILYL----ENPPSRDELVKLIADMGIS 54 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHHH-------TTCCCEEECTT----TSCCCHHHHHHHHHHHTSC
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCCEEEEECC----CCCccHHHHHHHhcccCCC
Confidence 345678999999987766655 45555555443 2345899999999988764
No 377
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=81.75 E-value=5.9 Score=28.89 Aligned_cols=51 Identities=12% Similarity=0.057 Sum_probs=30.2
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhc
Q psy299 69 VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKK 127 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~ 127 (240)
++.|..+.||.|..- ..=++...-|+.+||.+--+.++ .+++.-++..++.
T Consensus 2 V~vYtt~~c~~c~~k-k~c~~aK~lL~~kgV~feEidI~-------~d~~~r~eM~~~~ 52 (121)
T 1u6t_A 2 IRVYIASSSGSTAIK-KKQQDVLGFLEANKIGFEEKDIA-------ANEENRKWMRENV 52 (121)
T ss_dssp EEEEECTTCSCHHHH-HHHHHHHHHHHHTTCCEEEEECT-------TCHHHHHHHHHHS
T ss_pred EEEEecCCCCCccch-HHHHHHHHHHHHCCCceEEEECC-------CCHHHHHHHHHhc
Confidence 566678999999521 12223334455667777777665 3555555555554
No 378
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=81.53 E-value=1.5 Score=31.11 Aligned_cols=26 Identities=15% Similarity=0.272 Sum_probs=17.0
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecC
Q psy299 75 SRCGYTGKHYKELVELDEKFRDRGLRILAFPCN 107 (240)
Q Consensus 75 twCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D 107 (240)
+|||.|......|++. |+.+-.+.++
T Consensus 31 p~Cp~C~~ak~~L~~~-------gi~~~~~dI~ 56 (109)
T 3ipz_A 31 PMCGFSNTVVQILKNL-------NVPFEDVNIL 56 (109)
T ss_dssp BSSHHHHHHHHHHHHT-------TCCCEEEEGG
T ss_pred CCChhHHHHHHHHHHc-------CCCcEEEECC
Confidence 3999999877766653 4555555444
No 379
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=81.36 E-value=1.6 Score=31.66 Aligned_cols=14 Identities=21% Similarity=0.503 Sum_probs=11.1
Q ss_pred CCCCcHHHHHHHHH
Q psy299 76 RCGYTGKHYKELVE 89 (240)
Q Consensus 76 wCp~C~~~~~~L~~ 89 (240)
|||+|......|++
T Consensus 34 ~Cp~C~~ak~lL~~ 47 (118)
T 2wem_A 34 QCGFSNAVVQILRL 47 (118)
T ss_dssp SSHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHH
Confidence 99999977666664
No 380
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=81.05 E-value=1.2 Score=36.21 Aligned_cols=60 Identities=5% Similarity=-0.110 Sum_probs=36.1
Q ss_pred eEEEEcC-CCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccC-----CCCccchhhhhhh
Q psy299 168 TKFIVDK-NGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAA-----NASPASLIPNIEK 238 (240)
Q Consensus 168 ~~~lID~-~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~~~ 238 (240)
..++.|. ++.+...|.-......+. . +..+ ..||||++|++++++-. ....++++++|+.
T Consensus 108 fplLsD~~~~~vak~yGv~~~~~~~~----G-~~~p------~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~ 173 (224)
T 3keb_A 108 IALLSTLRGRDFHKRYGVLITEYPLS----G-YTSP------AIILADAANVVHYSERLANTRDFFDFDAIEKLLQE 173 (224)
T ss_dssp CEEEESTTCTTHHHHTTCBCCSTTST----T-CBCC------EEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHH
T ss_pred ceEEEcCCchHHHHHhCCcccccccc----C-CccC------EEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHH
Confidence 4489998 688776664322211110 0 1122 79999999999998532 2234777777754
No 381
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=80.46 E-value=2.1 Score=31.17 Aligned_cols=50 Identities=14% Similarity=0.254 Sum_probs=35.8
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCc
Q psy299 69 VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNV 129 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~ 129 (240)
+..|..++|+.|+.....|++ +|+.+-.+.+. .++.+.++++++++..|.
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~~~~eL~~~l~~~g~ 56 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQ-------QGITPQVVLYL----ETPPSVDKLKELLQQLGF 56 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHT-------TTCCCEEECTT----TSCCCHHHHHHHHHHTTC
T ss_pred EEEEECCCCHHHHHHHHHHHH-------cCCCcEEEeec----cCCCcHHHHHHHHHhcCC
Confidence 455678999999987766653 45555444433 334689999999999886
No 382
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=80.26 E-value=0.91 Score=35.20 Aligned_cols=57 Identities=16% Similarity=0.183 Sum_probs=36.3
Q ss_pred eEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCC----Cccchhhhhhh
Q psy299 168 TKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANA----SPASLIPNIEK 238 (240)
Q Consensus 168 ~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~ 238 (240)
..++.|.++.+...+.-..... + ...-..||||++|+++++|.... ..+++++.|++
T Consensus 93 fp~l~D~~~~~~~~ygv~~~~~-----------g---~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~ 153 (186)
T 1n8j_A 93 YAMIGDPTGALTRNFDNMREDE-----------G---LADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKA 153 (186)
T ss_dssp SEEEECTTSHHHHHTTCEETTT-----------T---EECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred eeEEECCchHHHHHhCCccCCC-----------C---ceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 3478898887665553221100 0 12348999999999999975432 34667777765
No 383
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=80.20 E-value=1.3 Score=31.94 Aligned_cols=27 Identities=19% Similarity=0.289 Sum_probs=20.7
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhh
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEK 238 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (240)
..|+||++|+++.+. ..++++.+.|++
T Consensus 112 ~~~lid~~G~i~~~~---~~~~~l~~~l~~ 138 (142)
T 3ewl_A 112 TIYLLDGRKRVILKD---TSMEQLIDYLAT 138 (142)
T ss_dssp EEEEECTTCBEEECS---CCHHHHHHHHHC
T ss_pred eEEEECCCCCEEecC---CCHHHHHHHHHH
Confidence 789999999999864 456666666654
No 384
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=79.95 E-value=1.5 Score=32.99 Aligned_cols=19 Identities=5% Similarity=0.106 Sum_probs=16.7
Q ss_pred cceeEEEEcCCCCeeeecc
Q psy299 206 WNFTKFIVDKNGAPVERHA 224 (240)
Q Consensus 206 ~~~~~~~i~~~~~~~~~~~ 224 (240)
+.-..||||++|+++++|.
T Consensus 129 ~~p~~~liD~~G~i~~~~~ 147 (165)
T 1q98_A 129 TSRAVIVLDEQNNVLHSQL 147 (165)
T ss_dssp BCCEEEEECTTSBEEEEEE
T ss_pred cceeEEEEcCCCEEEEEEe
Confidence 4568999999999999985
No 385
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=79.61 E-value=0.53 Score=41.01 Aligned_cols=33 Identities=6% Similarity=0.063 Sum_probs=26.8
Q ss_pred ceeEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 207 NFTKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 207 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
--..||||++|+++.++.....++++.+.|++.
T Consensus 165 ~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~l 197 (352)
T 2hyx_A 165 WPAEYLIDATGTVRHIKFGEGDYNVTETLVRQL 197 (352)
T ss_dssp ESEEEEECTTSBEEEEEESBCCHHHHHHHHHHH
T ss_pred cCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 348899999999999988777777777777653
No 386
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=79.57 E-value=3.5 Score=30.52 Aligned_cols=30 Identities=20% Similarity=0.150 Sum_probs=21.7
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
..||||++|+++. .+....++++.+.|++.
T Consensus 133 ~~~lid~~G~i~~-~g~~~~~~~l~~~l~~l 162 (165)
T 3ha9_A 133 YIVIMDKSSNVLY-AGTTPSLGELESVIKSV 162 (165)
T ss_dssp EEEEEETTCCEEE-EEESCCHHHHHHHHHHC
T ss_pred EEEEEcCCCcEEE-eCCCCCHHHHHHHHHHH
Confidence 7899999999999 43332456676666654
No 387
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=78.64 E-value=1.2 Score=32.97 Aligned_cols=30 Identities=13% Similarity=0.170 Sum_probs=21.9
Q ss_pred eEEEEcCCCCeeeeccCCCCc----cchhhhhhh
Q psy299 209 TKFIVDKNGAPVERHAANASP----ASLIPNIEK 238 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~ 238 (240)
..||||++|+++.++...... +++++.|++
T Consensus 124 ~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 124 GTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp EEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred eEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 699999999999997655433 455555554
No 388
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=78.21 E-value=0.77 Score=35.80 Aligned_cols=56 Identities=13% Similarity=0.055 Sum_probs=34.0
Q ss_pred EEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCC----Cccchhhhhhh
Q psy299 169 KFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANA----SPASLIPNIEK 238 (240)
Q Consensus 169 ~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~ 238 (240)
.++.|.++.+...+.-..... -+..+ ..||||++|+++.++.... ..+++++.|++
T Consensus 101 p~l~D~~~~~~~~~gv~~~~~--------~~~~P------~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~ 160 (197)
T 1qmv_A 101 PLLADVTRRLSEDYGVLKTDE--------GIAYR------GLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQA 160 (197)
T ss_dssp CEEECTTCHHHHHTTCEETTT--------TEECE------EEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred EEEECCcHHHHHHcCCccCCC--------Cceee------EEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHh
Confidence 378898887665543221110 00111 6899999999999965433 23667766654
No 389
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=76.63 E-value=1.7 Score=34.23 Aligned_cols=46 Identities=4% Similarity=-0.091 Sum_probs=28.4
Q ss_pred eEEEEcC-CCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeecc
Q psy299 168 TKFIVDK-NGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHA 224 (240)
Q Consensus 168 ~~~lID~-~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~ 224 (240)
..++.|. ++.+...+.-......+ .+ .+.-..||||++|++++++-
T Consensus 136 f~~l~D~~~~~~~~~ygv~~~~~~~--------~g---~~~p~~~lID~~G~I~~~~~ 182 (200)
T 3zrd_A 136 VITLSTLRGADFKQAYGVAITEGPL--------AG---LTARAVVVLDGQDNVIYSEL 182 (200)
T ss_dssp EEEEETTSCTHHHHHTTCEECSSTT--------TT---SBCCEEEEECTTSBEEEEEE
T ss_pred ceEEecCchHHHHHHhCceeecccC--------CC---ccccEEEEECCCCeEEEEEe
Confidence 4478888 77766555322111000 00 15568999999999999963
No 390
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=76.45 E-value=21 Score=26.44 Aligned_cols=81 Identities=2% Similarity=-0.058 Sum_probs=47.3
Q ss_pred CcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCc
Q psy299 79 YTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGT 158 (240)
Q Consensus 79 ~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~ 158 (240)
.-....+.+++++++++++ +.++.+..+ .+.....++.+|+.-.
T Consensus 46 ~~~~~~~~~~~vAk~fkgk-i~Fv~vd~~---------~~~~~~~l~~fGl~~~-------------------------- 89 (147)
T 3bj5_A 46 DYDGKLSNFKTAAESFKGK-ILFAFIDSD---------HTDNQRILEFFGLKKE-------------------------- 89 (147)
T ss_dssp SHHHHHHHHHHHHHTTTTT-CEEEEECTT---------CGGGHHHHHHTTCCGG--------------------------
T ss_pred hHHHHHHHHHHHHHHcCCc-eEEEEEecc---------hHhHHHHHHHcCCCcc--------------------------
Confidence 4444578888888888875 777777432 1222234444454210
Q ss_pred ccccccccceEEEEcC--CCCeEEecc-CCCCccchHHHHHHhcccC
Q psy299 159 LVDAIKWNFTKFIVDK--NGVPVERHA-ANASPASLIPHIEILGRTS 202 (240)
Q Consensus 159 ~~~~v~~~P~~~lID~--~G~Iv~~~~-~~~~~~~l~~~L~~ll~~~ 202 (240)
-.|...+++. +++ .+... +..+++.|.+.++.+++++
T Consensus 90 ------~~P~v~i~~~~~~~~-Ky~~~~~~~t~~~i~~Fv~d~l~Gk 129 (147)
T 3bj5_A 90 ------ECPAVRLITLEEEMT-KYKPESEELTAERITEFCHRFLEGK 129 (147)
T ss_dssp ------GCSEEEEEECSSSCE-EECCSCCCCCHHHHHHHHHHHHTTC
T ss_pred ------cCCEEEEEecccccc-cCCCCcccCCHHHHHHHHHHHHcCC
Confidence 1256667764 332 23332 4556777999999999875
No 391
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=75.13 E-value=10 Score=30.30 Aligned_cols=39 Identities=10% Similarity=0.015 Sum_probs=28.5
Q ss_pred cccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcc
Q psy299 162 AIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGR 200 (240)
Q Consensus 162 ~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~ 200 (240)
++...|+.++++++|++.........-+.+...|+++..
T Consensus 202 ~v~~~Pslvl~~~~g~~~~~~~~~~~r~~~~~~l~~~~~ 240 (244)
T 3q6o_A 202 GVTDFPSCYLLFRNGSVSRVPVLMESRSFYTAYLQRLSG 240 (244)
T ss_dssp TCCCSSEEEEEETTSCEEECCCSSSSHHHHHHHHHTC--
T ss_pred CCCCCCeEEEEeCCCCeEeeccccccHHHHHHHHHhCCC
Confidence 566779999999999988877655555557777776653
No 392
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=74.85 E-value=1.2 Score=36.80 Aligned_cols=56 Identities=18% Similarity=0.112 Sum_probs=34.2
Q ss_pred EEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCC----Cccchhhhhhh
Q psy299 170 FIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANA----SPASLIPNIEK 238 (240)
Q Consensus 170 ~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~ 238 (240)
++.|.++.+...+.-.... . + +.--=..||||++|+++.++.-.. ..++++..|++
T Consensus 100 il~D~~~~ia~~ygv~~~~-~----------g--~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~a 159 (249)
T 3a2v_A 100 IIADPQGTVARRLGLLHAE-S----------A--THTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKA 159 (249)
T ss_dssp EEECTTSHHHHHHTCCCTT-C----------S--SSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred EEECCchHHHHHhCCcccc-C----------C--CcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHH
Confidence 7889988876655322111 1 0 111227899999999999964332 34666666654
No 393
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=73.93 E-value=1.7 Score=32.68 Aligned_cols=49 Identities=10% Similarity=0.025 Sum_probs=27.9
Q ss_pred eEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCC
Q psy299 168 TKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAAN 226 (240)
Q Consensus 168 ~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~ 226 (240)
..++.|+++.+...+.-.......- + ..+..+ ..|||| +|++++++-..
T Consensus 98 ~~~l~D~~~~~~~~~gv~~~~~~~g--~-~~~~~p------~~~vid-~G~i~~~~~~~ 146 (162)
T 1tp9_A 98 VKFLADGSATYTHALGLELDLQEKG--L-GTRSRR------FALLVD-DLKVKAANIEG 146 (162)
T ss_dssp EEEEECTTSHHHHHTTCEEEETTTT--S-EEEECC------EEEEEE-TTEEEEEEECS
T ss_pred eEEEECCCchHHHHcCcccccccCC--C-Ccccee------EEEEEE-CCEEEEEEeeC
Confidence 4478999988766553221110000 0 000112 689999 99999997543
No 394
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=73.59 E-value=2.2 Score=33.89 Aligned_cols=56 Identities=11% Similarity=0.019 Sum_probs=35.1
Q ss_pred EEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCC----Cccchhhhhhh
Q psy299 169 KFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANA----SPASLIPNIEK 238 (240)
Q Consensus 169 ~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~ 238 (240)
.++.|+++.+...+.-.... .....-..||||++|+++.++.... ..+++++.|++
T Consensus 115 p~l~D~~~~~~~~ygv~~~~--------------~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~ 174 (211)
T 2pn8_A 115 PLLSDLTHQISKDYGVYLED--------------SGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQA 174 (211)
T ss_dssp CEEECTTSHHHHHTTCEETT--------------TTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred EEEECCchHHHHHcCCcccC--------------CCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 37889888766555321110 0012448999999999999973322 34677777664
No 395
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=71.98 E-value=7.3 Score=31.53 Aligned_cols=35 Identities=11% Similarity=0.117 Sum_probs=24.2
Q ss_pred ceEEEEcCCCCeEEecc-CCCCccchHHHHHHhcccC
Q psy299 167 FTKFIVDKNGVPVERHA-ANASPASLIPHIEILGRTS 202 (240)
Q Consensus 167 P~~~lID~~G~Iv~~~~-~~~~~~~l~~~L~~ll~~~ 202 (240)
|..+++|.+++ .+... ...+.+.|.+.++.+++|+
T Consensus 195 p~~~~~~~~~~-ky~~~~~~~t~~~i~~Fv~~~~~Gk 230 (250)
T 3ec3_A 195 VNAAILDESGK-KFAMEPEEFDSDALREFVMAFKKGK 230 (250)
T ss_dssp CEEEEECTTSC-EEECCCCSCCHHHHHHHHHHHHTTC
T ss_pred cEEEEEcCCCc-eecCCcccCCHHHHHHHHHHHHCCC
Confidence 45577776654 34333 3456778999999999886
No 396
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=69.55 E-value=4.2 Score=32.61 Aligned_cols=24 Identities=13% Similarity=0.227 Sum_probs=18.5
Q ss_pred cEEEEEEecCCCCCcHHHHHHHHH
Q psy299 66 HVLVIVNVASRCGYTGKHYKELVE 89 (240)
Q Consensus 66 k~vlv~F~atwCp~C~~~~~~L~~ 89 (240)
...++.|..+|||.|+.....|++
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~ 192 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHD 192 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHH
T ss_pred cceEEEEECCCChHHHHHHHHHHH
Confidence 345677888999999988777665
No 397
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=72.28 E-value=0.97 Score=33.54 Aligned_cols=27 Identities=11% Similarity=0.235 Sum_probs=18.9
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhh
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNI 236 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 236 (240)
..||||++|+++.++.. ..++++.+.|
T Consensus 117 ~~~lid~~G~i~~~~~g-~~~~~l~~~l 143 (159)
T 2ls5_A 117 RNVLIDREGKIVKLTRL-YNEEEFASLV 143 (159)
Confidence 57899999999999754 4454443333
No 398
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=68.86 E-value=2.4 Score=32.68 Aligned_cols=50 Identities=12% Similarity=0.119 Sum_probs=30.6
Q ss_pred eEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccC
Q psy299 168 TKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAA 225 (240)
Q Consensus 168 ~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~ 225 (240)
..++.|++|++...|.-... +.+...+......+ .+|||| +|++++.+-.
T Consensus 106 fp~l~D~~~~va~~yGv~~~-~~~~~~~g~~~~~r------~tfvID-dG~I~~~~v~ 155 (173)
T 3mng_A 106 VRLLADPTGAFGKETDLLLD-DSLVSIFGNRRLKR------FSMVVQ-DGIVKALNVE 155 (173)
T ss_dssp CEEEECTTCHHHHHHTCBCC-STTHHHHSSCCBCC------EEEEEE-TTEEEEEEEC
T ss_pred eEEEECCChHHHHHhCCCcc-cccccccCCcceEE------EEEEEE-CCEEEEEEEe
Confidence 34899999988776643322 11222111111223 899999 9999999543
No 399
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=70.60 E-value=1.1 Score=32.26 Aligned_cols=21 Identities=19% Similarity=0.298 Sum_probs=17.7
Q ss_pred eEEEEcCCCCeeeeccCCCCc
Q psy299 209 TKFIVDKNGAPVERHAANASP 229 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~ 229 (240)
..|+||++|+++.+++.....
T Consensus 111 ~~~lid~~G~i~~~~~~~~~~ 131 (143)
T 2lus_A 111 ALVIVKKDGTLISMNGRGEVQ 131 (143)
Confidence 679999999999998776554
No 400
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=67.00 E-value=3.3 Score=29.95 Aligned_cols=51 Identities=6% Similarity=0.216 Sum_probs=35.5
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcc
Q psy299 69 VIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQ 130 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~ 130 (240)
+..|..++|+.|+.....|.+ .+..+.++-+.-+ +.+.+++++++++.|.+
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~-----~gi~~~~~di~~~------~~t~~eL~~~l~~~g~~ 56 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLEN-----QGIAPQVIKYLET------SPSVEELKRLYQQLGLN 56 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHH-----TTCCCEEECHHHH------CCCHHHHHHHHHHHTCS
T ss_pred EEEEECCCChHHHHHHHHHHH-----cCCceEEEEeccC------cCcHHHHHHHHHHcCCc
Confidence 345668899999988777765 2223455555433 35899999999998865
No 401
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=66.82 E-value=0.64 Score=33.83 Aligned_cols=30 Identities=13% Similarity=0.251 Sum_probs=24.2
Q ss_pred cEEEEEEecCCCCCcHHHHHHHHHHHHHHh
Q psy299 66 HVLVIVNVASRCGYTGKHYKELVELDEKFR 95 (240)
Q Consensus 66 k~vlv~F~atwCp~C~~~~~~L~~l~~~~~ 95 (240)
|.+||-|.-+-|+.|...-..|+++.++|.
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~ledeY~ 31 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEELKSEYD 31 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTTTTTEE
T ss_pred CceEEEeCCCccHHHHHHHHHHHHhhcccc
Confidence 678999999999999988887765555544
No 402
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=66.58 E-value=3.2 Score=30.84 Aligned_cols=30 Identities=13% Similarity=0.275 Sum_probs=23.5
Q ss_pred eEEEEcCCCCeeeeccCCC--Cccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAANA--SPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~ 239 (240)
+.+++|++|+++.++ ... .++++++.|++.
T Consensus 119 t~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~ 150 (154)
T 2ju5_A 119 ELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSA 150 (154)
T ss_dssp EEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHH
T ss_pred EEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHH
Confidence 788999999999999 444 467777777653
No 403
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=65.98 E-value=3 Score=34.29 Aligned_cols=57 Identities=9% Similarity=0.068 Sum_probs=33.9
Q ss_pred eEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCCCc----cchhhhhhh
Q psy299 168 TKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANASP----ASLIPNIEK 238 (240)
Q Consensus 168 ~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~ 238 (240)
..++.|.++.+...+.-...... +..+ ..||||++|++++++...... +++++.|++
T Consensus 157 fp~l~D~~~~va~~ygv~~~~~g--------~~~p------~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~a 217 (254)
T 3tjj_A 157 IPLLSDLTHQISKDYGVYLEDSG--------HTLR------GLFIIDDKGILRQITLNDLPVGRSVDETLRLVQA 217 (254)
T ss_dssp SCEEECTTSHHHHHHTCEETTTT--------EECE------EEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred cceeeCcHHHHHHHcCCccccCC--------Cccc------eEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHh
Confidence 34889998877665532211100 1112 689999999999996543333 455555543
No 404
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=65.91 E-value=1.4 Score=32.06 Aligned_cols=28 Identities=18% Similarity=0.538 Sum_probs=20.4
Q ss_pred ceeEEEEcCCCCeeeeccCCCCccchhhhhh
Q psy299 207 NFTKFIVDKNGAPVERHAANASPASLIPNIE 237 (240)
Q Consensus 207 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (240)
.-..||||++|+++.++.. ++++.+.|+
T Consensus 114 ~P~~~lid~~G~i~~~~~~---~~~l~~~l~ 141 (143)
T 4fo5_A 114 GFKNFLINDEGVIIAANVT---PEKLTEILK 141 (143)
T ss_dssp CCCEEEECTTSBEEEESCC---HHHHHHHHT
T ss_pred CCcEEEECCCCEEEEccCC---HHHHHHHHH
Confidence 3478999999999999753 555555444
No 405
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=65.82 E-value=3.6 Score=32.92 Aligned_cols=61 Identities=7% Similarity=-0.051 Sum_probs=34.9
Q ss_pred EEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCC----Cccchhhhhhh
Q psy299 170 FIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANA----SPASLIPNIEK 238 (240)
Q Consensus 170 ~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~ 238 (240)
++.|.++++...+.-.. .+... ..+...+.-..||||++|+++.++.... ..++++..|++
T Consensus 99 il~D~~~~va~~ygv~~-~~~~~-------~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~ 163 (220)
T 1xcc_A 99 IVCDESRELANKLKIMD-EQEKD-------ITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKS 163 (220)
T ss_dssp EEECTTSHHHHHHTCEE-EEEEC-------TTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred eEECchhHHHHHhCCCC-ccccc-------CCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 78899887665543211 11000 0000123458999999999999974222 34666666654
No 406
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=65.77 E-value=0.74 Score=24.73 Aligned_cols=21 Identities=10% Similarity=0.110 Sum_probs=18.2
Q ss_pred CCCCcHHHHHHHHHHHHHHhh
Q psy299 76 RCGYTGKHYKELVELDEKFRD 96 (240)
Q Consensus 76 wCp~C~~~~~~L~~l~~~~~~ 96 (240)
-||.|+..+|.++.+..-|.+
T Consensus 5 ~CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 5 CCPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp ECTTSSCEESSHHHHHHHHHH
T ss_pred cCccccccCcChHHHHHHHHH
Confidence 399999999999998888765
No 407
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=64.30 E-value=3.7 Score=29.01 Aligned_cols=31 Identities=16% Similarity=0.268 Sum_probs=25.1
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
..+++|++|+++.++.-...++++.+.|++.
T Consensus 89 t~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~ 119 (130)
T 2kuc_A 89 TLLFINSSGEVVYRLVGAEDAPELLKKVKLG 119 (130)
T ss_dssp EEEEECTTSCEEEEEESCCCHHHHHHHHHHH
T ss_pred EEEEECCCCcEEEEecCCCCHHHHHHHHHHH
Confidence 6788999999999987766777787777653
No 408
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=64.29 E-value=4 Score=33.11 Aligned_cols=58 Identities=12% Similarity=0.114 Sum_probs=34.1
Q ss_pred EEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcce---eEEEEcCCCCeeeeccCCC----Cccchhhhhhh
Q psy299 170 FIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNF---TKFIVDKNGAPVERHAANA----SPASLIPNIEK 238 (240)
Q Consensus 170 ~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~---~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~ 238 (240)
++.|.++++...+.-. .++.. ....|.+ ..||||++|+++.++.... ..++++..|++
T Consensus 98 il~D~~~~va~~ygv~-~~~~~----------~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~ 162 (233)
T 2v2g_A 98 IIADETRELAVKLGMV-DPDER----------TSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDS 162 (233)
T ss_dssp EEECTTCHHHHHTTCE-EEEEE----------CTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred EEECChHHHHHHhCCc-Ccccc----------cCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 7889988766554321 11110 0011222 7899999999999973222 24667766654
No 409
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=64.25 E-value=4.6 Score=32.36 Aligned_cols=58 Identities=12% Similarity=-0.023 Sum_probs=34.7
Q ss_pred EEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCc---ceeEEEEcCCCCeeeeccCCC----Cccchhhhhhh
Q psy299 170 FIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKW---NFTKFIVDKNGAPVERHAANA----SPASLIPNIEK 238 (240)
Q Consensus 170 ~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~---~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~ 238 (240)
++.|.++++...+.-.. ++.. .. -.| -=..||||++|+++.++.... ..++++..|++
T Consensus 102 il~D~~~~va~~ygv~~-~~~~--------~~--~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~ 166 (224)
T 1prx_A 102 IIDDRNRELAILLGMLD-PAEK--------DE--KGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVIS 166 (224)
T ss_dssp EEECTTCHHHHHTTSSC-SCTT--------CS--SSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHH
T ss_pred eeecCchHHHHHhCCCC-cccc--------cC--CCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 78899988776553221 1110 00 011 127899999999999974322 34667666654
No 410
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=63.77 E-value=8.2 Score=29.19 Aligned_cols=45 Identities=7% Similarity=0.169 Sum_probs=26.7
Q ss_pred EEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeec
Q psy299 169 KFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERH 223 (240)
Q Consensus 169 ~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~ 223 (240)
.++.|++|++...+.-..... .+ ... ..-.=.+||| ++|++++++
T Consensus 95 p~l~D~~~~~~~~~gv~~~~~----~~---~g~--~~~~p~t~lI-~~G~I~~~~ 139 (167)
T 2wfc_A 95 QMLADPGGAFTKAVDMELDLS----AV---LGN--VRSKRYSLVI-EDGVVTKVN 139 (167)
T ss_dssp EEEECTTSHHHHHTTCEECCH----HH---HSS--CEECCEEEEE-ETTEEEEEE
T ss_pred EEEECCCCcHHHHcCCccccc----cc---cCc--ccceEEEEEE-eCCEEEEEE
Confidence 389999998776654322210 00 000 0011279999 999999984
No 411
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=63.40 E-value=5.5 Score=28.00 Aligned_cols=31 Identities=16% Similarity=0.206 Sum_probs=25.8
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
+.+++|++|+++.++.....++++.+.|++.
T Consensus 85 t~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 115 (126)
T 2l57_A 85 TTVFLDKEGNKFYVHQGLMRKNNIETILNSL 115 (126)
T ss_dssp EEEEECTTCCEEEEEESCCCHHHHHHHHHHH
T ss_pred EEEEECCCCCEEEEecCCCCHHHHHHHHHHH
Confidence 6788999999999987777778888888764
No 412
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=62.92 E-value=15 Score=31.56 Aligned_cols=40 Identities=10% Similarity=-0.041 Sum_probs=22.2
Q ss_pred CcEEEEEEecCCCCC-cHHHHHHHHHHHHHHhhcCcEEEEee
Q psy299 65 GHVLVIVNVASRCGY-TGKHYKELVELDEKFRDRGLRILAFP 105 (240)
Q Consensus 65 gk~vlv~F~atwCp~-C~~~~~~L~~l~~~~~~~~v~vi~Vs 105 (240)
+++++|.|...+|.. |......+++...++++ .+.++.+.
T Consensus 236 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~-~i~f~~id 276 (382)
T 2r2j_A 236 GLPFLILFHMKEDTESLEIFQNEVARQLISEKG-TINFLHAD 276 (382)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT-TSEEEEEE
T ss_pred CCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC-eeEEEEEc
Confidence 567777777777643 33333444444444443 46666664
No 413
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=61.86 E-value=4 Score=27.42 Aligned_cols=31 Identities=32% Similarity=0.402 Sum_probs=25.4
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
=++++.++|+++.++.. ..++++.+.|++.|
T Consensus 76 Pt~~~~~~G~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 76 PTFVFLKNGVKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp SEEEEEETTEEEEEEES-CCHHHHHHHHHHTC
T ss_pred cEEEEEcCCcEEEEEcC-CCHHHHHHHHHHhC
Confidence 36888899999999877 67888888888764
No 414
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=61.84 E-value=7.1 Score=30.33 Aligned_cols=49 Identities=14% Similarity=0.129 Sum_probs=36.9
Q ss_pred EEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccC
Q psy299 171 IVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAA 225 (240)
Q Consensus 171 lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~ 225 (240)
+.|++|+++.......+.+.|.+.+..+--+ =.-||+|.+|.++...++
T Consensus 132 i~~~~g~~~Gvl~~~i~l~~l~~~~~~~~~g------g~~~l~d~~G~ii~~~~~ 180 (217)
T 4dah_A 132 VLDSKRNVTDYLVAAIQIDYLKNLINLLSPD------VYIEVVNQDGKMIFASGQ 180 (217)
T ss_dssp EECTTSCEEEEEEEEEEHHHHHHHHHHHCTT------SCEEEEETTSCEEEEESC
T ss_pred EECCCCCEEEEEEEEEcHHHHHHHHHhcCCC------cEEEEEcCCCCEEEeCCC
Confidence 6788999988887777777787777665322 267999999988876544
No 415
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=61.35 E-value=4.7 Score=29.02 Aligned_cols=16 Identities=31% Similarity=0.501 Sum_probs=14.7
Q ss_pred eEEEEcCCCCeeeecc
Q psy299 209 TKFIVDKNGAPVERHA 224 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~ 224 (240)
..||||++|+++.++.
T Consensus 116 ~~~lid~~G~i~~~~~ 131 (142)
T 3eur_A 116 TLYLLDKNKTVLLKDA 131 (142)
T ss_dssp EEEEECTTCBEEEEEE
T ss_pred eEEEECCCCcEEecCC
Confidence 7899999999999975
No 416
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=60.81 E-value=3.4 Score=31.09 Aligned_cols=30 Identities=17% Similarity=0.325 Sum_probs=24.0
Q ss_pred eEEEEcCCCCeeeeccCCCC-ccchhhhhhh
Q psy299 209 TKFIVDKNGAPVERHAANAS-PASLIPNIEK 238 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~ 238 (240)
+.++||++|+++.++.--.. ++++++.|++
T Consensus 133 t~~lid~~G~~~~~~~G~~~~~~~l~~~l~~ 163 (172)
T 3f9u_A 133 FYVLIDNEGNPLNKSYAYDEDISKYINFLQT 163 (172)
T ss_dssp EEEEECTTSCBSSCCBCSCCCHHHHHHHHHH
T ss_pred eEEEECCCCCEEeeccCCCCCHHHHHHHHHH
Confidence 78899999999999776555 7777776665
No 417
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=59.43 E-value=6.5 Score=26.48 Aligned_cols=32 Identities=28% Similarity=0.460 Sum_probs=25.4
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
=++++.++|+++.++.....++++.+.|++.|
T Consensus 75 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 75 PTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp CEEEEESSSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred CEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 36777799999999887777788888887654
No 418
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=58.52 E-value=18 Score=26.14 Aligned_cols=54 Identities=17% Similarity=0.132 Sum_probs=37.7
Q ss_pred CCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcc
Q psy299 63 YKGHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQ 130 (240)
Q Consensus 63 ~~gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~ 130 (240)
|+|.|++|++-.-.. . ..+.++.+.+...|+.+|+|.-. +.+.+++.+...|++
T Consensus 45 F~~aPVVlDl~~l~~---~---~dl~~L~~~l~~~gl~~vGV~g~--------~~~~~~~~a~~~GLp 98 (120)
T 3ghf_A 45 LKHAPVVINVSGLES---P---VNWPELHKIVTSTGLRIIGVSGC--------KDASLKVEIDRMGLP 98 (120)
T ss_dssp HTTCEEEEEEEECCS---S---CCHHHHHHHHHTTTCEEEEEESC--------CCHHHHHHHHHHTCC
T ss_pred hCCCcEEEEccccCC---h---HHHHHHHHHHHHcCCEEEEEeCC--------CcHHHHHHHHHCCCC
Confidence 578899999864321 1 24677778888889999999732 335577777777764
No 419
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=57.21 E-value=79 Score=25.90 Aligned_cols=58 Identities=19% Similarity=0.218 Sum_probs=37.4
Q ss_pred cccCCeEeecCCCCcccCCCCC-------CcEEEEEEecCCCCCcHHH-HHHHHHHHH---------HHhhcCcEEEEee
Q psy299 43 ETVYDFTVKNIKGEDVPLSTYK-------GHVLVIVNVASRCGYTGKH-YKELVELDE---------KFRDRGLRILAFP 105 (240)
Q Consensus 43 ~~~p~f~l~d~~G~~v~ls~~~-------gk~vlv~F~atwCp~C~~~-~~~L~~l~~---------~~~~~~v~vi~Vs 105 (240)
..+|.|.++|.+|.++-.+.-. ++.+...|. |+.. ...|.++.. ++.. ++.|..|+
T Consensus 12 ~~VPVF~Itn~~G~Pll~~~~~~~~~~~~~~~V~~~F~------s~~dA~~~L~~lk~~~~~np~~~~~~~-~~kV~~vs 84 (252)
T 4ev1_A 12 DSVPIYLVTNEKGLPLSRPLPNAPNGQKAGGSITGAYM------SRQEAQAFINELRNAKNKDPKMQEIVK-SLQVTAVP 84 (252)
T ss_dssp TTSEEEEEECTTCCBCEEECCCCTTSCCSCSEEEEEES------CHHHHHHHHHHHHHCSSCCHHHHHHHT-TCEEEEEE
T ss_pred cCCcEEEEECCCCCeEEEecCCccccccCCCeEEEEEe------cHHHHHHHHHHHHhccccCchhhhhcc-CceEEEee
Confidence 4689999999999987665433 344544443 3332 455666655 3332 58999998
Q ss_pred cC
Q psy299 106 CN 107 (240)
Q Consensus 106 ~D 107 (240)
++
T Consensus 85 L~ 86 (252)
T 4ev1_A 85 LG 86 (252)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 420
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=55.04 E-value=5.9 Score=27.09 Aligned_cols=29 Identities=17% Similarity=0.181 Sum_probs=22.6
Q ss_pred EEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 210 KFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 210 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
+++++++|+++.++... .++++.+.|++.
T Consensus 81 t~~~~~~G~~~~~~~G~-~~~~l~~~l~~~ 109 (111)
T 2pu9_C 81 TFKILKENSVVGEVTGA-KYDKLLEAIQAA 109 (111)
T ss_dssp EEEEESSSSEEEEEESS-CHHHHHHHHHHH
T ss_pred EEEEEeCCcEEEEEcCC-CHHHHHHHHHHh
Confidence 68999999999987554 377787777764
No 421
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=54.08 E-value=6 Score=27.38 Aligned_cols=31 Identities=35% Similarity=0.414 Sum_probs=25.0
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
=++++.++|+++.++.. ..++++.+.|+++|
T Consensus 87 Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 87 PTFIAIKNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp SEEEEEETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred ceEEEEeCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 36888899999999876 57788888888765
No 422
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=53.06 E-value=5.9 Score=26.48 Aligned_cols=32 Identities=31% Similarity=0.407 Sum_probs=25.8
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
=++++.++|+++.++.....++++.+.|+++|
T Consensus 74 Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 74 PTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp SEEEEEETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred cEEEEEeCCeEEEEEecCCCHHHHHHHHHhhC
Confidence 36777799999999877777788888888765
No 423
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=52.80 E-value=6.6 Score=27.83 Aligned_cols=31 Identities=26% Similarity=0.357 Sum_probs=24.8
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
=++++.++|+++.++.. ..++++.+.|+++|
T Consensus 93 Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 93 PTFMFLKEGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp SEEEEEETTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred CEEEEEECCEEEEEEeC-CCHHHHHHHHHHhc
Confidence 36888899999999866 57888888888754
No 424
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=51.94 E-value=7 Score=26.05 Aligned_cols=31 Identities=26% Similarity=0.403 Sum_probs=24.7
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
=++++.++|+++.++.. ..++++.+.|+++|
T Consensus 74 Pt~~~~~~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 74 PTFVFIKDGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp SEEEEEETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred cEEEEEeCCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 36777789999999876 57788888888765
No 425
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=51.34 E-value=2.2 Score=31.70 Aligned_cols=55 Identities=13% Similarity=0.112 Sum_probs=32.6
Q ss_pred EEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCC---Cccchhhhhhh
Q psy299 169 KFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANA---SPASLIPNIEK 238 (240)
Q Consensus 169 ~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~ 238 (240)
.++.|+++.+...+.-...+. .+ . .-.+||| ++|+++++|.... ..+++++.|++
T Consensus 94 ~~l~D~~~~~~~~~gv~~~p~----------~g-~---~~~~~li-~~G~i~~~~~g~~~~~~~~~~~~~l~~ 151 (159)
T 2a4v_A 94 HLLSDPKREFIGLLGAKKTPL----------SG-S---IRSHFIF-VDGKLKFKRVKISPEVSVNDAKKEVLE 151 (159)
T ss_dssp EEEECTTCHHHHHHTCBSSSS----------SC-B---CCEEEEE-ETTEEEEEEESCCHHHHHHHHHHHHHH
T ss_pred eEEECCccHHHHHhCCccccc----------CC-c---cceEEEE-cCCEEEEEEccCCccccHHHHHHHHHH
Confidence 478899887766554332220 01 0 1268999 9999999985432 22455555543
No 426
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=50.85 E-value=7.3 Score=27.20 Aligned_cols=30 Identities=17% Similarity=0.171 Sum_probs=23.5
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
=+++++++|+++.++.... ++++.+.|++.
T Consensus 93 Pt~~~~~~G~~~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 93 PTFKILKENSVVGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp SEEEEEETTEEEEEEESSC-HHHHHHHHHHH
T ss_pred eEEEEEeCCcEEEEEcCCC-HHHHHHHHHHh
Confidence 3689999999999976543 78888888764
No 427
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=50.55 E-value=16 Score=29.43 Aligned_cols=79 Identities=3% Similarity=-0.095 Sum_probs=45.3
Q ss_pred CC-HHHHHHHHHhcCcceeeeEeeecC-CCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchH
Q psy299 115 GD-ADQICEFTKKKNVQFDLFEKINVN-GDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLI 192 (240)
Q Consensus 115 ~~-~e~~~~~~~~~~~~fp~~~~~d~~-~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~ 192 (240)
.+ .+.+.+.+++.|++-.-+...-.. ......+....... ...++.++|+++ | +|+ +...|..+++.+.
T Consensus 135 ~d~~~~L~~~a~~~Gld~~~~~~~l~s~~~~~~~v~~~~~~a----~~~Gv~GvPtfv-v--~g~--~~v~Ga~~~e~~~ 205 (239)
T 3gl5_A 135 FNDDERLVELAVGAGLDAEEVRAVLADPAAYADEVRADEREA----AQLGATGVPFFV-L--DRA--YGVSGAQPAEVFT 205 (239)
T ss_dssp SSCHHHHHHHHHHTTCCHHHHHHHHHCTTTTHHHHHHHHHHH----HHTTCCSSSEEE-E--TTT--EEEESSCCHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHcCcHhHHHHHHHHHHHH----HHCCCCeeCeEE-E--CCc--EeecCCCCHHHHH
Confidence 37 899999999999875322110011 12111222211111 112577788865 4 455 2235667888899
Q ss_pred HHHHHhcccC
Q psy299 193 PHIEILGRTS 202 (240)
Q Consensus 193 ~~L~~ll~~~ 202 (240)
+.|++++++.
T Consensus 206 ~~i~~~~~~~ 215 (239)
T 3gl5_A 206 QALTQAWGER 215 (239)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHhhc
Confidence 9999999875
No 428
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=49.69 E-value=11 Score=29.72 Aligned_cols=36 Identities=22% Similarity=0.130 Sum_probs=26.7
Q ss_pred cccccceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCC
Q psy299 162 AIKWNFTKFIVDKNGVPVERHAANASPASLIPHIEILGRTSA 203 (240)
Q Consensus 162 ~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~ 203 (240)
+|.++|+++| +|+. ..|..+++.|.+.|++++++++
T Consensus 165 GV~GtPtfvv---ng~~---~~G~~~~e~l~~~i~~~~~~~~ 200 (205)
T 3gmf_A 165 NVSGTPSFMI---DGIL---LAGTHDWASLRPQILARLNEGH 200 (205)
T ss_dssp CCCSSSEEEE---TTEE---CTTCCSHHHHHHHHHHHHTC--
T ss_pred CCccCCEEEE---CCEE---EeCCCCHHHHHHHHHHHhhccc
Confidence 6888899765 5653 4566788889999999998763
No 429
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=48.72 E-value=8 Score=26.82 Aligned_cols=30 Identities=27% Similarity=0.398 Sum_probs=24.5
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
=+|++-++|+.+.|+.- +.++++.+.|+++
T Consensus 75 PT~~~~~~G~~v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 75 PTFLFMKNGQKLDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp SEEEEEETTEEEEEEES-CCHHHHHHHHHHH
T ss_pred cEEEEEECCEEEEEEeC-cCHHHHHHHHHhc
Confidence 37888899999999876 5788888888764
No 430
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=47.80 E-value=6.6 Score=26.76 Aligned_cols=31 Identities=13% Similarity=0.303 Sum_probs=24.3
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
=++++.++|+++.++.....++++.+.|++.
T Consensus 79 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 109 (112)
T 1t00_A 79 PTLNVYQGGEVAKTIVGAKPKAAIVRDLEDF 109 (112)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHTHHH
T ss_pred cEEEEEeCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 3677889999999987766677787777664
No 431
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=47.60 E-value=10 Score=27.08 Aligned_cols=30 Identities=13% Similarity=0.217 Sum_probs=24.4
Q ss_pred eEEEEcCCCCee--eeccCCCCccchhhhhhh
Q psy299 209 TKFIVDKNGAPV--ERHAANASPASLIPNIEK 238 (240)
Q Consensus 209 ~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~ 238 (240)
+.+++|++|+++ .++.-...++++.+.|+.
T Consensus 94 t~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~ 125 (134)
T 2fwh_A 94 TILFFDGQGQEHPQARVTGFMDAETFSAHLRD 125 (134)
T ss_dssp EEEEECTTSCBCGGGCBCSCCCHHHHHHHHHH
T ss_pred EEEEECCCCCEeeeeeeeeccCHHHHHHHHHh
Confidence 778999999999 677777777888777764
No 432
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=47.46 E-value=9.4 Score=26.12 Aligned_cols=31 Identities=35% Similarity=0.456 Sum_probs=24.8
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
=++++.++|+++.++... .++++.+.|++.|
T Consensus 81 Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 81 PTFKVYKNGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp SEEEEEETTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred cEEEEEECCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 368888999999998766 7788888887654
No 433
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=47.38 E-value=6.6 Score=26.69 Aligned_cols=30 Identities=23% Similarity=0.258 Sum_probs=23.6
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
=++++.++|+++.++.-. .++++.+.|++.
T Consensus 80 Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 80 PTFHVYKDGVKADDLVGA-SQDKLKALVAKH 109 (112)
T ss_dssp SEEEEEETTEEEEEEESC-CHHHHHHHHHHH
T ss_pred cEEEEEECCeEEEEEcCC-CHHHHHHHHHHH
Confidence 368888999999998665 777888777764
No 434
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=45.33 E-value=14 Score=25.62 Aligned_cols=31 Identities=19% Similarity=0.274 Sum_probs=25.1
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
=++++-++|+.+.++... .++++.+.|++.|
T Consensus 86 Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 86 PTFQFFKKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp SEEEEESSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred cEEEEEeCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 357777999999998776 7888888888765
No 435
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=44.26 E-value=12 Score=29.09 Aligned_cols=61 Identities=15% Similarity=0.170 Sum_probs=36.0
Q ss_pred eEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccC-------------CCCccchhh
Q psy299 168 TKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAA-------------NASPASLIP 234 (240)
Q Consensus 168 ~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~-------------~~~~~~~~~ 234 (240)
..+|-|++|++...+.-..+...+- + ....|- ..|||| +|++++.+-. ...++++++
T Consensus 106 f~lLsD~~~~~a~~yGv~~~~~~~G------~--g~~~~R-~tfvId-dG~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~ 175 (182)
T 1xiy_A 106 IKYISDGNSSFTDSMNMLVDKSNFF------M--GMRPWR-FVAIVE-NNILVKMFQEKDKQHNIQTDPYDISTVNNVKE 175 (182)
T ss_dssp SEEEECTTSHHHHHTTCEEECGGGT------C--CEEECC-EEEEEE-TTEEEEEEECSSCCTTCSSCCCSTTSHHHHHH
T ss_pred ceEEEeCchHHHHHhCCceeccccC------C--CCceEE-EEEEEc-CCEEEEEEEeCCcccccccCcccCCCHHHHHH
Confidence 4589999998876664322111100 0 000111 479999 9999998632 244577888
Q ss_pred hhhh
Q psy299 235 NIEK 238 (240)
Q Consensus 235 ~~~~ 238 (240)
.|++
T Consensus 176 ~L~~ 179 (182)
T 1xiy_A 176 FLKN 179 (182)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 7765
No 436
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=44.23 E-value=9.4 Score=25.87 Aligned_cols=29 Identities=28% Similarity=0.353 Sum_probs=22.8
Q ss_pred EEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 210 KFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 210 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
++++.++|+++.++.. ..++++.+.|+++
T Consensus 82 t~~~~~~G~~~~~~~g-~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 82 TFIFLKDGKLVDKTVG-ADKDGLPTLVAKH 110 (113)
T ss_dssp EEEEEETTEEEEEEEC-CCTTHHHHHHHHH
T ss_pred EEEEEeCCEEEEEEec-CCHHHHHHHHHHh
Confidence 5677789999999876 5778888887764
No 437
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=41.91 E-value=24 Score=25.19 Aligned_cols=12 Identities=8% Similarity=-0.097 Sum_probs=5.3
Q ss_pred HHHHHHHHhcCc
Q psy299 118 DQICEFTKKKNV 129 (240)
Q Consensus 118 e~~~~~~~~~~~ 129 (240)
..+.+.+++.|.
T Consensus 97 ~~l~~~l~~~G~ 108 (138)
T 5nul_A 97 RDFEERMNGYGC 108 (138)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHCCC
Confidence 444444444444
No 438
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=41.28 E-value=12 Score=25.73 Aligned_cols=32 Identities=25% Similarity=0.461 Sum_probs=24.9
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
=++++-++|+++.++.....++++.+.|+++|
T Consensus 86 Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l 117 (121)
T 2i1u_A 86 PTLILFKDGQPVKRIVGAKGKAALLRELSDVV 117 (121)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHTCSCC
T ss_pred CEEEEEECCEEEEEecCCCCHHHHHHHHHHHH
Confidence 35677789999999887777788888877653
No 439
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=40.91 E-value=9.4 Score=27.14 Aligned_cols=30 Identities=20% Similarity=0.400 Sum_probs=23.7
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
=++++.++|+++.++.. ..++++.+.|+++
T Consensus 92 Pt~~i~~~G~~~~~~~G-~~~~~l~~~l~~~ 121 (125)
T 1r26_A 92 PTFIIARSGKMLGHVIG-ANPGMLRQKLRDI 121 (125)
T ss_dssp SEEEEEETTEEEEEEES-SCHHHHHHHHHHH
T ss_pred cEEEEEeCCeEEEEEeC-CCHHHHHHHHHHH
Confidence 36888899999999876 5778888887764
No 440
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=40.74 E-value=9.7 Score=26.37 Aligned_cols=30 Identities=17% Similarity=0.235 Sum_probs=23.3
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
=++++.++|+++.++.-.. ++++.+.|++.
T Consensus 89 Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 89 PTFLFMKEGDVKDRVVGAI-KEELTAKVGLH 118 (122)
T ss_dssp SEEEEEETTEEEEEEESSC-HHHHHHHHHHH
T ss_pred cEEEEEeCCEEEEEEeCcC-HHHHHHHHHHH
Confidence 3688889999999876655 87887777764
No 441
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=40.53 E-value=8.2 Score=33.63 Aligned_cols=17 Identities=18% Similarity=0.450 Sum_probs=12.1
Q ss_pred EEEEecCCCCCcHHHHH
Q psy299 69 VIVNVASRCGYTGKHYK 85 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~ 85 (240)
++.|..+|||.|.+...
T Consensus 263 VvVYsk~~CPyC~~Ak~ 279 (362)
T 2jad_A 263 IFVASKTYCPYSHAALN 279 (362)
T ss_dssp EEEEECTTCHHHHHHHH
T ss_pred EEEEEcCCCcchHHHHH
Confidence 45566789999986543
No 442
>3lif_A Putative diguanylate cyclase (ggdef) with PAS/PAC; PDC fold, signaling protein; HET: CIT; 2.70A {Rhodopseudomonas palustris}
Probab=39.33 E-value=38 Score=26.59 Aligned_cols=49 Identities=8% Similarity=0.012 Sum_probs=34.1
Q ss_pred EEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeec
Q psy299 171 IVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERH 223 (240)
Q Consensus 171 lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~ 223 (240)
+.|++|+++.......+.+.|.+.+ ..-.+.-+-.-||||.+|.++.++
T Consensus 134 i~~~~g~~~Gvl~~~i~l~~l~~~~----~~~~~~~~g~~~l~d~~G~ii~~~ 182 (254)
T 3lif_A 134 LETTDGKFFGVVVATIESEYFSTFY----KTFDLGPGGSISLLHSDGRLLIQW 182 (254)
T ss_dssp EECTTCCEEEEEEEEECHHHHHHHH----TTSCCCTTCEEEEEETTSBEEEEE
T ss_pred eeCCCCCEeEEEEEEECHHHHHHHH----HhcCcCCCcEEEEEeCCCcEEEEC
Confidence 6678998887766666665555544 333343444789999999999874
No 443
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=38.49 E-value=17 Score=24.38 Aligned_cols=31 Identities=19% Similarity=0.188 Sum_probs=24.8
Q ss_pred EEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 210 KFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 210 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
++++=++|+++.|+.....++++.+.|+++|
T Consensus 74 t~~~~~~G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 74 TVLLFYNGKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEEEEETTEEEEEEESSCCHHHHHHHHHTTC
T ss_pred EEEEEeCCeEEEEEeCCcCHHHHHHHHHHhh
Confidence 4555579999999888778889998888764
No 444
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=37.40 E-value=18 Score=23.93 Aligned_cols=31 Identities=29% Similarity=0.433 Sum_probs=24.8
Q ss_pred EEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 210 KFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 210 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
++++-++|+.+.++.....++++.+.|++.|
T Consensus 76 t~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 76 TLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred EEEEEeCCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 5555579999999888777888888888764
No 445
>3f1p_B ARYL hydrocarbon receptor nuclear translocator; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.0 PDB: 3f1o_B* 3f1n_B 3h7w_B* 3h82_B* 1x0o_A 2hv1_A 4h6j_B 2b02_A* 2k7s_A 2a24_B
Probab=36.61 E-value=90 Score=20.54 Aligned_cols=52 Identities=10% Similarity=-0.055 Sum_probs=33.0
Q ss_pred EEEEcCCCCeEEecc------C-------------CCCccc---hHHHHHHhcccCCCCcceeEEEEcCCCCee
Q psy299 169 KFIVDKNGVPVERHA------A-------------NASPAS---LIPHIEILGRTSAIKWNFTKFIVDKNGAPV 220 (240)
Q Consensus 169 ~~lID~~G~Iv~~~~------~-------------~~~~~~---l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~ 220 (240)
.+++|.+|++.+... | ...|++ +.+.+.+++....-.|.++--+..++|..+
T Consensus 15 i~~~d~~g~i~~~n~~~~~~~G~~~~el~g~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~~ 88 (121)
T 3f1p_B 15 ISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNQEWL 88 (121)
T ss_dssp EEEECTTSBEEEECTTHHHHHSCCGGGTTTSBGGGGBCTTTHHHHHHHHHHHTTSTTCCEEEEEEEECTTSCEE
T ss_pred EEEECCCceEEEECcchhhhhCCChHHHcCCCHHHeECHHHHHHHHHHHHHHHhcCCCcccEEEEEEecCCCEE
Confidence 367888888887541 0 011222 456667777555556788878888998754
No 446
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=35.84 E-value=4.4 Score=22.67 Aligned_cols=20 Identities=20% Similarity=0.207 Sum_probs=15.1
Q ss_pred CCCcHHHHHHHHHHHHHHhh
Q psy299 77 CGYTGKHYKELVELDEKFRD 96 (240)
Q Consensus 77 Cp~C~~~~~~L~~l~~~~~~ 96 (240)
||.|...+..-.+|..-|+.
T Consensus 8 CP~C~~~l~s~~~L~~Hye~ 27 (34)
T 3mjh_B 8 CPQCMKSLGSADELFKHYEA 27 (34)
T ss_dssp CTTTCCEESSHHHHHHHHHH
T ss_pred CcHHHHHcCCHHHHHHHHHh
Confidence 99999887777776666654
No 447
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=35.73 E-value=13 Score=27.80 Aligned_cols=31 Identities=10% Similarity=0.195 Sum_probs=22.8
Q ss_pred eEEEEcCCCCeeeeccCC----------CCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAAN----------ASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~----------~~~~~~~~~~~~~ 239 (240)
+.+++|++|+++.++.-. ..++++++.|++.
T Consensus 106 t~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~ 146 (164)
T 1sen_A 106 RILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEA 146 (164)
T ss_dssp EEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHH
T ss_pred eEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHH
Confidence 667889999999885432 5567777777653
No 448
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=35.72 E-value=2 Score=22.30 Aligned_cols=11 Identities=9% Similarity=0.250 Sum_probs=8.6
Q ss_pred CCCCcHHHHHH
Q psy299 76 RCGYTGKHYKE 86 (240)
Q Consensus 76 wCp~C~~~~~~ 86 (240)
-||.|+..+|.
T Consensus 8 qcpvcqq~mpa 18 (29)
T 3vhs_A 8 QCPVCQQMMPA 18 (29)
T ss_dssp ECTTTCCEEEG
T ss_pred eChHHHHhCcH
Confidence 59999987764
No 449
>4e6z_A Apicoplast TIC22, putative; TIC complex, import protein, transport protein; 2.15A {Plasmodium falciparum 3D7}
Probab=35.68 E-value=18 Score=30.22 Aligned_cols=58 Identities=10% Similarity=0.082 Sum_probs=35.2
Q ss_pred cccCCeEeecCCCCcccCCCCCCcEEEEEEecCCCCCcHHH-HHHHHHHHHHHh---hcCcEEEEeecC
Q psy299 43 ETVYDFTVKNIKGEDVPLSTYKGHVLVIVNVASRCGYTGKH-YKELVELDEKFR---DRGLRILAFPCN 107 (240)
Q Consensus 43 ~~~p~f~l~d~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~-~~~L~~l~~~~~---~~~v~vi~Vs~D 107 (240)
..+|.|.++|.+|.++-.+.-.+++. ..|. ++.. ...|+++.+.-. ..++.|+.++++
T Consensus 75 ~~VPVF~Itn~~G~Pll~~~~~~~V~-~fF~------s~~DA~a~L~el~k~~~~~~~~~~kV~pvsL~ 136 (279)
T 4e6z_A 75 EVIPVFLITNYNSSPYIFQENEKQVC-YMFL------CPYDAENMLNDMIKYNGMKYNGNIKIHNITMK 136 (279)
T ss_dssp TTSEEEEEECTTCCBCCEEETTEEEE-EEES------SHHHHHHHHHHHHHHCHHHHTTSCEEEEEEHH
T ss_pred cCCCEEEEEcCCCCEEEecCCCCeEE-EEEC------CHHHHHHHHHHHHhccCcccccCceEEEecHH
Confidence 57899999999999886554333333 3332 3333 333445433221 236999999876
No 450
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=35.66 E-value=30 Score=27.24 Aligned_cols=89 Identities=10% Similarity=-0.046 Sum_probs=0.0
Q ss_pred CCCCCCCHHHHHHHHHhcCc---ceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCC
Q psy299 110 GGQEPGDADQICEFTKKKNV---QFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANA 186 (240)
Q Consensus 110 ~~~~~~~~e~~~~~~~~~~~---~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~ 186 (240)
.+..-.+.+.+.+++++.|+ +..-+ ............+..........++.++|+ |+||.+|+ -..+.|..
T Consensus 128 ~~~~i~~~~~L~~~a~~~Gl~~~d~~~~----~~~~~s~~~~~~v~~~~~~a~~~gv~G~Pt-fvv~~~g~-~~~~~G~~ 201 (226)
T 1r4w_A 128 RDEDITESQNILSAAEKAGMATAQAQHL----LNKISTELVKSKLRETTGAACKYGAFGLPT-TVAHVDGK-TYMLFGSD 201 (226)
T ss_dssp SCCCCSSHHHHHHHHHHTTCCHHHHHHH----HTTTTSHHHHHHHHHHHHHHHHTTCCSSCE-EEEEETTE-EEEEESTT
T ss_pred CCCCCCCHHHHHHHHHHcCCCchhHHHH----HHHcCCHHHHHHHHHHHHHHHHCCCCCCCE-EEEeCCCC-cCceeCCC
Q ss_pred CccchHHHHHHhcccCCC
Q psy299 187 SPASLIPHIEILGRTSAI 204 (240)
Q Consensus 187 ~~~~l~~~L~~ll~~~~i 204 (240)
..+.+.+.|.+...++.+
T Consensus 202 ~~~~l~~~l~~~~~~~~~ 219 (226)
T 1r4w_A 202 RMELLAYLLGEKWMGPVP 219 (226)
T ss_dssp CHHHHHHHHTCCCCCSSC
T ss_pred cHHHHHHHhcCcccCCCC
No 451
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=35.48 E-value=27 Score=24.43 Aligned_cols=30 Identities=13% Similarity=0.153 Sum_probs=20.9
Q ss_pred eEEEEcCCCCeeeeccC-------CCCccchhhhhhh
Q psy299 209 TKFIVDKNGAPVERHAA-------NASPASLIPNIEK 238 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~-------~~~~~~~~~~~~~ 238 (240)
+.+++|++|+++.++.. ....+++.+.|++
T Consensus 94 t~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~ 130 (133)
T 3fk8_A 94 AVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAK 130 (133)
T ss_dssp EEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHH
T ss_pred eEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHH
Confidence 67889999999999766 3444555555443
No 452
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=34.62 E-value=15 Score=25.63 Aligned_cols=30 Identities=27% Similarity=0.364 Sum_probs=23.1
Q ss_pred EEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 210 KFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 210 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
++++.++|+++.++.. ..++++.+.|+++|
T Consensus 92 t~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~ 121 (130)
T 1wmj_A 92 TFLFIKDGAEADKVVG-ARKDDLQNTIVKHV 121 (130)
T ss_dssp CCCBCTTTTCCBCCCT-TCTTTHHHHHHHHT
T ss_pred eEEEEeCCeEEEEEeC-CCHHHHHHHHHHHH
Confidence 5777799999999866 46778888777643
No 453
>3h4p_A Proteasome subunit alpha; core particle, cytoplasm, hydrolase, protease, threonine protease; 4.10A {Methanocaldococcus jannaschii}
Probab=34.55 E-value=1.3e+02 Score=24.40 Aligned_cols=62 Identities=13% Similarity=0.109 Sum_probs=39.7
Q ss_pred ceEEEEcCCCCeEEec---cC----------------CCCccc----hHHHHHHhcccCCCCcceeEEEEcCCCCeeeec
Q psy299 167 FTKFIVDKNGVPVERH---AA----------------NASPAS----LIPHIEILGRTSAIKWNFTKFIVDKNGAPVERH 223 (240)
Q Consensus 167 P~~~lID~~G~Iv~~~---~~----------------~~~~~~----l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~ 223 (240)
|..|.+|+.|...... .| ..+.++ ....|...+.. --.|+++-.+|++++...++.
T Consensus 150 p~Ly~iDp~G~~~~~~~~aiGsgs~~a~~~Le~~~~~~ms~eea~~la~~al~~a~~~-~sg~~iev~vi~~~~~~~~~l 228 (264)
T 3h4p_A 150 ARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDDITLDEGLELAITALTKANED-IKPENVDVCIITVKDAQFKKI 228 (264)
T ss_dssp EEEEEECTTCCCEEESEEEESTTHHHHTTTHHHHCCTTCCSHHHHHHHHHHHHHHSSS-CCTTSEEEEEEETTTTEEEEC
T ss_pred CEEEEECCCceEEecCeEEECCCHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhc-cCCCeEEEEEEEeCCCcEEEC
Confidence 7889999999766532 11 122222 23344444443 457899999999999888777
Q ss_pred cCCCCc
Q psy299 224 AANASP 229 (240)
Q Consensus 224 ~~~~~~ 229 (240)
..+-+.
T Consensus 229 ~~~ei~ 234 (264)
T 3h4p_A 229 PVEEIK 234 (264)
T ss_dssp CTTTTG
T ss_pred CHHHHH
Confidence 666543
No 454
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=34.30 E-value=19 Score=25.65 Aligned_cols=30 Identities=17% Similarity=0.328 Sum_probs=22.0
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
+-+++|++|+++ ++.....++++.+.|++.
T Consensus 95 t~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~ 124 (136)
T 2l5l_A 95 SILFIPMEGKPE-MAQGAMPKASFKKAIDEF 124 (136)
T ss_dssp EEEEECSSSCCE-EEESCCCHHHHHHHHHHH
T ss_pred EEEEECCCCcEE-EEeCCCCHHHHHHHHHHH
Confidence 567889999998 555556667777777653
No 455
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=33.69 E-value=27 Score=24.70 Aligned_cols=31 Identities=29% Similarity=0.333 Sum_probs=24.0
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
+-+++|++|+++ ++.....++++.+.|++.|
T Consensus 108 t~~~~~~~g~~~-~~~G~~~~~~l~~~l~~~l 138 (141)
T 3hxs_A 108 TIWFVPMKGEPQ-VNMGALSKEQLKGYIDKVL 138 (141)
T ss_dssp EEEEECSSSCCE-EEESCCCHHHHHHHHHHTT
T ss_pred EEEEEeCCCCEE-EEeCCCCHHHHHHHHHHHH
Confidence 567889999998 6666667788888887654
No 456
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=33.57 E-value=20 Score=24.92 Aligned_cols=31 Identities=23% Similarity=0.379 Sum_probs=23.9
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
=++++-++|+++.++... .++++.+.|+++|
T Consensus 90 Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 90 PTFVFFKNGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp SEEEEEETTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred cEEEEEECCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 367777899999997665 7788888887754
No 457
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=33.45 E-value=1.5e+02 Score=22.98 Aligned_cols=35 Identities=20% Similarity=0.019 Sum_probs=26.4
Q ss_pred CcEEEEEEecCCCCCcHHHHHHHHHHHHHHhhcCcEEEEe
Q psy299 65 GHVLVIVNVASRCGYTGKHYKELVELDEKFRDRGLRILAF 104 (240)
Q Consensus 65 gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~~~v~vi~V 104 (240)
.+++||-|+++|| ....+.+.++.+.++ .+.+...
T Consensus 27 ~~v~vVgff~~~~---~~~~~~f~~~A~~l~--~~~F~~t 61 (227)
T 4f9z_D 27 TEVAVIGFFQDLE---IPAVPILHSMVQKFP--GVSFGIS 61 (227)
T ss_dssp SSEEEEEECSCSC---STHHHHHHHHTTTCT--TSEEEEE
T ss_pred CCeEEEEEecCCC---chhHHHHHHHHHhCC--CceEEEE
Confidence 5789999999986 566778888888884 4776554
No 458
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=33.43 E-value=20 Score=24.73 Aligned_cols=29 Identities=21% Similarity=0.457 Sum_probs=22.3
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhh
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEK 238 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (240)
=++++.++|+++.++.-.. ++++.+.|++
T Consensus 85 Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 85 PTFVLGKDGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp SEEEEEETTEEEEEEESSC-HHHHHHHHHT
T ss_pred cEEEEEeCCeEEEEEeCCC-HHHHHHHHHh
Confidence 4678889999999876555 7777777764
No 459
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=33.02 E-value=22 Score=24.99 Aligned_cols=31 Identities=23% Similarity=0.270 Sum_probs=23.6
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
+-+++ ++|+++.++.-...++++.+.|++.|
T Consensus 92 t~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 92 TLLLF-KNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp EEEEE-ESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred EEEEE-ECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 33445 99999999877777788888887754
No 460
>1mzu_A PPR; photoactive yellow protein, PAS, PYP, signaling protein; HET: HC4; 2.00A {Rhodospirillum centenum} SCOP: d.110.3.1
Probab=32.24 E-value=1.2e+02 Score=22.09 Aligned_cols=53 Identities=17% Similarity=0.110 Sum_probs=34.9
Q ss_pred eEEEEcCCCCeEEec--------------cCC---------CCccchHHHHHHhcccCCCCcc-eeEEEEcCCCCeeee
Q psy299 168 TKFIVDKNGVPVERH--------------AAN---------ASPASLIPHIEILGRTSAIKWN-FTKFIVDKNGAPVER 222 (240)
Q Consensus 168 ~~~lID~~G~Iv~~~--------------~~~---------~~~~~l~~~L~~ll~~~~i~~~-~~~~~i~~~~~~~~~ 222 (240)
..+++|++|+|+... .|. .....+...+.+.++.+. |+ -..|++++.|+|+.-
T Consensus 34 GiivlD~dg~I~~~N~~~e~isG~s~eeviGk~~f~~~~p~~~~~~f~grf~~~~~~G~--l~~~~~yv~~~~~~p~~v 110 (129)
T 1mzu_A 34 GAIQVDGSGVIHRYNRTESRLSGRIPERVIGRNFFTEVAPCTNIPAFSGRFMDGVTSGT--LDARFDFVFDFQMAPVRV 110 (129)
T ss_dssp EEEEEETTCBEEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHTSC--CEEEEEEEEECSSCEEEE
T ss_pred eEEEECCCCeEEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc--eeEEEEEEEcCCCCEEEE
Confidence 358999999999865 010 011225566666666544 54 457899999998875
No 461
>2k49_A UPF0339 protein SO_3888; solution structure, structural genomics, unknown functio protein structure initiative; NMR {Shewanella oneidensis} SCOP: d.348.1.1 d.348.1.1
Probab=31.84 E-value=1.4e+02 Score=21.35 Aligned_cols=58 Identities=16% Similarity=0.154 Sum_probs=38.6
Q ss_pred ceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEE----------EEcCCCCeeeecc
Q psy299 167 FTKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKF----------IVDKNGAPVERHA 224 (240)
Q Consensus 167 P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~----------~i~~~~~~~~~~~ 224 (240)
+++.|..++|+|+..-.+..+.......|..+-+-.+-.-.|+.+ |++.||.++-+..
T Consensus 15 ~rFrLka~NgeiI~sSe~Y~sk~~a~~gI~sVk~na~~~~~fe~~~~~~gk~yF~Lka~NgqvIg~Se 82 (118)
T 2k49_A 15 FKFVLKAGNGEVILTSELYTGKSGAMNGIESVQTNSPIEARYAKEVAKNDKPYFNLKAANHQIIGTSQ 82 (118)
T ss_dssp EEEEEECSSSCEEEECCCBSSHHHHHHHHHHHHHHTTCGGGEEEEEETTTEEEEEEECTTCCEEEEBC
T ss_pred EEEEEEECCCCEEEECCCcCCHHHHHHHHHHHHHhCcccceEEEEEccCCCEEEEEEcCCCcEEEEcC
Confidence 466799999999997777677666667776666444333344443 5666777776643
No 462
>1j2q_H Proteasome beta subunit; ubiquitin, CP, hydrolase; HET: CIB; 2.83A {Archaeoglobus fulgidus} SCOP: d.153.1.4
Probab=31.73 E-value=71 Score=24.59 Aligned_cols=13 Identities=0% Similarity=-0.071 Sum_probs=11.8
Q ss_pred CcceeEEEEcCCC
Q psy299 205 KWNFTKFIVDKNG 217 (240)
Q Consensus 205 ~~~~~~~~i~~~~ 217 (240)
.++++-.+|+++|
T Consensus 172 ~~~i~v~vi~~~g 184 (202)
T 1j2q_H 172 GDGIDVVKITEDE 184 (202)
T ss_dssp CSCEEEEEECSSC
T ss_pred CCcEEEEEEeCCC
Confidence 6899999999986
No 463
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=31.69 E-value=23 Score=24.05 Aligned_cols=30 Identities=23% Similarity=0.362 Sum_probs=22.7
Q ss_pred EEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 210 KFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 210 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
++++-++|+++.|+.-. .++++.+.|+++|
T Consensus 80 t~~~~~~G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 80 TLLLFKNGKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp EEEEEETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred EEEEEECCEEEEEEeCC-CHHHHHHHHHhhC
Confidence 45555599999997655 6788888888764
No 464
>1nwz_A PYP, photoactive yellow protein; PAS, LOV, GAF, domains fold, signaling protein; HET: HC4; 0.82A {Halorhodospira halophila} SCOP: d.110.3.1 PDB: 1kou_A* 1ot9_A* 1otb_A* 1s4r_A* 1s4s_A* 1ts0_A* 1ts6_A* 1ts7_A* 1ts8_A* 1uwn_X* 1uwp_X* 2d01_A* 2phy_A* 2pyp_A* 2pyr_A* 2qj5_A* 2qj7_A* 2qws_A* 2zoh_A* 2zoi_A* ...
Probab=31.57 E-value=1e+02 Score=22.20 Aligned_cols=53 Identities=9% Similarity=0.134 Sum_probs=34.4
Q ss_pred eEEEEcCCCCeEEec--------------cCC---------CCccchHHHHHHhcccCCCCcc-eeEEEEcCCCCeeee
Q psy299 168 TKFIVDKNGVPVERH--------------AAN---------ASPASLIPHIEILGRTSAIKWN-FTKFIVDKNGAPVER 222 (240)
Q Consensus 168 ~~~lID~~G~Iv~~~--------------~~~---------~~~~~l~~~L~~ll~~~~i~~~-~~~~~i~~~~~~~~~ 222 (240)
..+++|++|+|+... .|. .....+...+.+.++.+. |+ -..|++++.|+|+.-
T Consensus 29 Gii~lD~~g~I~~~N~~~e~~sG~~~~eviGk~~f~~~~~~~~~~~f~~rf~~~~~~g~--l~~~~~~v~~~~~~p~~v 105 (125)
T 1nwz_A 29 GAIQLDGDGNILQYNAAEGDITGRDPKQVIGKNFFKDVAPCTDSPEFYGKFKEGVASGN--LNTMFEYTFDYQMTPTKV 105 (125)
T ss_dssp EEEEEETTCBEEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHHTC--CEEEEEEEECTTSCCEEE
T ss_pred eEEEECCCCEEEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc--eeEEEEEEEcCCCCEEEE
Confidence 358899999999765 010 011225556666666544 54 457899999998875
No 465
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=31.53 E-value=18 Score=26.00 Aligned_cols=32 Identities=19% Similarity=0.223 Sum_probs=25.1
Q ss_pred eeEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 208 FTKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 208 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
+=++++-++|+.+.++.....++++.+.|+++
T Consensus 79 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 110 (140)
T 3hz4_A 79 TPTFKFFCHGRPVWEQVGQIYPSILKNAVRDM 110 (140)
T ss_dssp ESEEEEEETTEEEEEEESSCCHHHHHHHHHHH
T ss_pred CCEEEEEeCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 34677779999999988777778888777654
No 466
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=31.45 E-value=16 Score=25.89 Aligned_cols=30 Identities=17% Similarity=0.315 Sum_probs=22.1
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
=+|++.++|+++.++... .++++.+.|++.
T Consensus 101 Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~ 130 (139)
T 3d22_A 101 PTFFFLRDGQQVDKLVGA-NKPELHKKITAI 130 (139)
T ss_dssp SEEEEEETTEEEEEEESC-CHHHHHHHHHHH
T ss_pred cEEEEEcCCeEEEEEeCC-CHHHHHHHHHHH
Confidence 367777999999997655 677777777653
No 467
>1u07_A TONB protein; beta-hairpin, protein transport; 1.13A {Escherichia coli} SCOP: d.212.1.2 PDB: 2gsk_B* 1ihr_A 1qxx_A
Probab=31.05 E-value=36 Score=22.64 Aligned_cols=32 Identities=19% Similarity=0.136 Sum_probs=22.8
Q ss_pred ceeEEEEcCCCCeeee-----ccCCCCccchhhhhhh
Q psy299 207 NFTKFIVDKNGAPVER-----HAANASPASLIPNIEK 238 (240)
Q Consensus 207 ~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~ 238 (240)
=...|.||++|++..- .+...+-++.++++++
T Consensus 27 V~v~~~i~~~G~v~~~~v~~ssg~~~ld~aa~~av~~ 63 (90)
T 1u07_A 27 VKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRR 63 (90)
T ss_dssp EEEEEEECTTSCEEEEEEEEEESSSSSHHHHHHHHTT
T ss_pred EEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHh
Confidence 3478999999998653 3444566777777765
No 468
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=30.40 E-value=25 Score=24.98 Aligned_cols=30 Identities=10% Similarity=0.162 Sum_probs=22.4
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhh
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEK 238 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (240)
=+|++.++|+++.|+.-...++.+.+-|++
T Consensus 94 Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~ 123 (135)
T 3emx_A 94 PTLVFYKEGRIVDKLVGATPWSLKVEKARE 123 (135)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHH
T ss_pred CeEEEEcCCEEEEEEeCCCCHHHHHHHHHH
Confidence 378888899999998776666655555554
No 469
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=30.36 E-value=26 Score=23.15 Aligned_cols=31 Identities=23% Similarity=0.349 Sum_probs=24.5
Q ss_pred EEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 210 KFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 210 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
++++=++|+++.++.....++++.+.|+++|
T Consensus 78 t~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 78 TTLIFVNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEEEEcCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 3333399999999988888888988888764
No 470
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=30.28 E-value=1.6e+02 Score=23.30 Aligned_cols=43 Identities=16% Similarity=0.286 Sum_probs=29.1
Q ss_pred CcEEEEEEecCCCCCcHHHHHHHHHHHHHHhh-cCcEEE--EeecC
Q psy299 65 GHVLVIVNVASRCGYTGKHYKELVELDEKFRD-RGLRIL--AFPCN 107 (240)
Q Consensus 65 gk~vlv~F~atwCp~C~~~~~~L~~l~~~~~~-~~v~vi--~Vs~D 107 (240)
||..+-+|+-.-||.|--..+.|.++.+++.+ .++.|. .+.++
T Consensus 1 ~~~~I~~~~D~~cPwcyig~~~l~~a~~~~~~~~~v~v~~~P~~L~ 46 (239)
T 3gl5_A 1 GHMRVEIWSDIACPWCYVGKARFEKALAAFPHRDGVEVVHRSFELD 46 (239)
T ss_dssp -CEEEEEEECSSCHHHHHHHHHHHHHHHTCTTGGGEEEEEEECCSC
T ss_pred CCeEEEEEEeCcCHhHHHHHHHHHHHHHhcCccCceEEEEEEeccc
Confidence 44444444466799999999999999988864 355554 44444
No 471
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=30.03 E-value=21 Score=32.59 Aligned_cols=21 Identities=33% Similarity=0.438 Sum_probs=16.6
Q ss_pred EEEEecCCCCCcHHHHHHHHH
Q psy299 69 VIVNVASRCGYTGKHYKELVE 89 (240)
Q Consensus 69 lv~F~atwCp~C~~~~~~L~~ 89 (240)
++.|..+|||.|......|++
T Consensus 20 v~vy~~~~Cp~C~~~k~~L~~ 40 (598)
T 2x8g_A 20 VILFSKTTCPYCKKVKDVLAE 40 (598)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHH
Confidence 567888999999977666664
No 472
>1iru_J 20S proteasome; cell cycle, immune response, proteolysis, ubiquitin, hydrolase; 2.75A {Bos taurus} SCOP: d.153.1.4 PDB: 3unb_I* 3une_I 3unf_I* 3unh_I
Probab=29.31 E-value=1.7e+02 Score=22.43 Aligned_cols=21 Identities=14% Similarity=0.156 Sum_probs=16.7
Q ss_pred CcceeEEEEcCCCCeeeeccC
Q psy299 205 KWNFTKFIVDKNGAPVERHAA 225 (240)
Q Consensus 205 ~~~~~~~~i~~~~~~~~~~~~ 225 (240)
.|+++-.+|+++|.-.+....
T Consensus 182 ~~~i~v~vi~~~g~~~~~~~~ 202 (205)
T 1iru_J 182 GMGVIVHIIEKDKITTRTLKA 202 (205)
T ss_dssp CSCEEEEEEESSBEEEEEBCC
T ss_pred CCceEEEEEcCCCEEEEEeec
Confidence 689999999999976665543
No 473
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=29.18 E-value=20 Score=24.71 Aligned_cols=30 Identities=20% Similarity=0.261 Sum_probs=22.9
Q ss_pred EEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 210 KFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 210 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
++++-++|+++.++.....++++.+.|++.
T Consensus 88 t~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 88 TVLAMKNGDVVDKFVGIKDEDQLEAFLKKL 117 (119)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred EEEEEeCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 455558999999988776778888777764
No 474
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=28.88 E-value=22 Score=25.59 Aligned_cols=31 Identities=10% Similarity=0.179 Sum_probs=24.4
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhc
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
=++++-++|+.+.+|.-....+++.+.|++.
T Consensus 111 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 141 (148)
T 3p2a_A 111 PTIMLYRNGKMIDMLNGAVPKAPFDNWLDEQ 141 (148)
T ss_dssp SEEEEEETTEEEEEESSCCCHHHHHHHHHHH
T ss_pred CEEEEEECCeEEEEEeCCCCHHHHHHHHHHH
Confidence 3566668999999998777778888877764
No 475
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=28.69 E-value=28 Score=22.94 Aligned_cols=30 Identities=20% Similarity=0.282 Sum_probs=23.6
Q ss_pred EEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 210 KFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 210 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
++++=++|+.+.++... .++++.+.|++.|
T Consensus 76 t~~~~~~g~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 76 TFQFFKKGQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp EEEEEETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred EEEEEECCeEEEEEeCC-CHHHHHHHHHHhC
Confidence 45555899999998777 7888888888765
No 476
>3lic_A Sensor protein; PDC fold, ATP-binding, kinase, nucleotide-binding, phosphopr transferase, transmembrane; 2.30A {Shewanella oneidensis}
Probab=28.52 E-value=20 Score=28.47 Aligned_cols=41 Identities=10% Similarity=0.088 Sum_probs=28.5
Q ss_pred CCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeec
Q psy299 175 NGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERH 223 (240)
Q Consensus 175 ~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~ 223 (240)
+|+++.......+.+.|.+.+. + ..+ ..||||.+|.++-..
T Consensus 156 ~g~~~Gv~~~~i~l~~l~~~~~-~-~~g------~~~l~d~~G~ii~~~ 196 (274)
T 3lic_A 156 QPDYFGVTTVDLALDRLPEQLG-I-APS------RLVVLDDQGRLIFHS 196 (274)
T ss_dssp TTCCCEEEEEEEEGGGHHHHHT-S-CGG------GEEEECTTSCEEECS
T ss_pred CCEEEEEEEEEEEHHHHHHHhc-c-CCc------eEEEECCCCCEEEeC
Confidence 7777666555556666777766 4 222 589999999998653
No 477
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=27.70 E-value=30 Score=22.80 Aligned_cols=31 Identities=23% Similarity=0.349 Sum_probs=23.3
Q ss_pred eEEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 209 TKFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
+-+++ ++|+++.++.....++++.+.|++.|
T Consensus 74 t~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 74 TLILF-KGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp EEEEE-ETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred EEEEE-eCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 34445 89999999877777788888887654
No 478
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=27.35 E-value=33 Score=22.55 Aligned_cols=30 Identities=13% Similarity=0.289 Sum_probs=23.4
Q ss_pred EEEEcCCCCeeeeccCCCCccchhhhhhhcC
Q psy299 210 KFIVDKNGAPVERHAANASPASLIPNIEKYL 240 (240)
Q Consensus 210 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (240)
-+++ ++|+++.++.....++++.+.|+++|
T Consensus 78 ~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 78 LMLV-RDGKVIDKKVGALPKSQLKAWVESAQ 107 (107)
T ss_dssp EEEE-ETTEEEEEEESCCCHHHHHHHHHHTC
T ss_pred EEEE-eCCEEEEEecCCCCHHHHHHHHHhcC
Confidence 3444 89999999877777788888888764
No 479
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=27.34 E-value=1.7e+02 Score=20.80 Aligned_cols=53 Identities=17% Similarity=0.160 Sum_probs=34.0
Q ss_pred cCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCC
Q psy299 97 RGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNG 176 (240)
Q Consensus 97 ~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G 176 (240)
.+...+++.+| +.+...+.++..|+.+..- ..+ .++.-..++-||+|
T Consensus 97 ~g~~~l~f~Vd--------Dvda~~~~l~~~Gv~~~~~-p~~------------------------~~~g~~~~f~DPdG 143 (155)
T 4g6x_A 97 DGIPAASFAVD--------DIAAEYERLSALGVRFTQE-PTD------------------------MGPVVTAILDDTCG 143 (155)
T ss_dssp TTCCSEEEEES--------CHHHHHHHHHHTTCCEEEE-EEE------------------------CSSCEEEEEECSSS
T ss_pred CCceEEEeeec--------hhhhhhhHHhcCCcEEeeC-CEE------------------------cCCeEEEEEECCCC
Confidence 35666677765 7888888888899876221 000 00111458999999
Q ss_pred CeEEec
Q psy299 177 VPVERH 182 (240)
Q Consensus 177 ~Iv~~~ 182 (240)
.++...
T Consensus 144 n~iel~ 149 (155)
T 4g6x_A 144 NLIQLM 149 (155)
T ss_dssp CEEEEE
T ss_pred CEEEEE
Confidence 988765
No 480
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=27.33 E-value=41 Score=25.00 Aligned_cols=17 Identities=6% Similarity=0.028 Sum_probs=10.9
Q ss_pred CCHHHHHHHHHhcCcce
Q psy299 115 GDADQICEFTKKKNVQF 131 (240)
Q Consensus 115 ~~~e~~~~~~~~~~~~f 131 (240)
+....+.+.++..|...
T Consensus 96 ~a~~~l~~~l~~~G~~~ 112 (161)
T 3hly_A 96 EPIDALLAQFRNLGLHT 112 (161)
T ss_dssp CCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHCCCEE
Confidence 45667777777766543
No 481
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=26.95 E-value=55 Score=22.26 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=23.0
Q ss_pred CCCCcccCCCCCCcEEEEEEecCCCCCcHHHHHHHH
Q psy299 53 IKGEDVPLSTYKGHVLVIVNVASRCGYTGKHYKELV 88 (240)
Q Consensus 53 ~~G~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~ 88 (240)
.||..+.|-++.+..+.|-+-+. |..|....-.|+
T Consensus 25 ~dGGdvelv~v~~g~V~V~L~Ga-C~gCpss~~TLk 59 (88)
T 1xhj_A 25 RDGGDCTLVDVEDGIVKLQLHGA-CGTCPSSTITLK 59 (88)
T ss_dssp HHSCEEEEEECCSSEEEEEEESS-CCSSCHHHHHHH
T ss_pred hcCCeEEEEEEECCEEEEEEeec-CCCCcchHHHHH
Confidence 46777777777777777777644 566666555554
No 482
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=26.93 E-value=58 Score=25.88 Aligned_cols=85 Identities=7% Similarity=-0.073 Sum_probs=44.1
Q ss_pred CCHHHHHHHHHhcCcceeeeEeeecCCCCCchHHHHHhhhcCCcccccccccceEEEEcCCCCeEEeccCCCCccchHHH
Q psy299 115 GDADQICEFTKKKNVQFDLFEKINVNGDNAHPLWKFLKHKQGGTLVDAIKWNFTKFIVDKNGVPVERHAANASPASLIPH 194 (240)
Q Consensus 115 ~~~e~~~~~~~~~~~~fp~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~v~~~P~~~lID~~G~Iv~~~~~~~~~~~l~~~ 194 (240)
.+.+.+.+.+++.|++-...... .....+......+..........++.++|++ +|+.+|+ -..+-|....+.|.+.
T Consensus 133 ~d~~~L~~~a~~~GLd~~~~~~~-l~~~~s~~~~~~l~~~~~~a~~~Gv~GvPtf-vv~~~g~-~~~f~G~drl~~l~~~ 209 (234)
T 3rpp_A 133 TEPQSILAAAEKAGMSAEQAQGL-LEKIATPKVKNQLKETTEAACRYGAFGLPIT-VAHVDGQ-THMLFGSDRMELLAHL 209 (234)
T ss_dssp SSHHHHHHHHHHTTCCHHHHHHH-HTTTTSHHHHHHHHHHHHHHHHTTCSSSCEE-EEEETTE-EEEEESSSCHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHHHHH-HHHccCHHHHHHHHHHHHHHHHcCCCCCCEE-EEeCCCC-cCceeCccCHHHHHHH
Confidence 47899999999999875111000 0111122222222222211112257778886 5565674 1234445556667777
Q ss_pred HHHhcccC
Q psy299 195 IEILGRTS 202 (240)
Q Consensus 195 L~~ll~~~ 202 (240)
|.+...++
T Consensus 210 L~~~~~~p 217 (234)
T 3rpp_A 210 LGEKWMGP 217 (234)
T ss_dssp HTCCCCCS
T ss_pred hccccCCC
Confidence 76665554
No 483
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=26.49 E-value=35 Score=17.19 Aligned_cols=15 Identities=13% Similarity=0.113 Sum_probs=12.4
Q ss_pred eEEEEcCCCCeEEec
Q psy299 168 TKFIVDKNGVPVERH 182 (240)
Q Consensus 168 ~~~lID~~G~Iv~~~ 182 (240)
++.|.|++|+++...
T Consensus 6 ss~IYD~~g~~i~~l 20 (26)
T 2v2f_A 6 SSKIYDNKNQLIADL 20 (26)
T ss_pred CCEEEeCCCCEeeec
Confidence 358999999999865
No 484
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=25.85 E-value=1.2e+02 Score=18.86 Aligned_cols=58 Identities=10% Similarity=-0.082 Sum_probs=37.2
Q ss_pred ceEEEEcCCCCeEEec-c---CCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCCCccchhhhh
Q psy299 167 FTKFIVDKNGVPVERH-A---ANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANASPASLIPNI 236 (240)
Q Consensus 167 P~~~lID~~G~Iv~~~-~---~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 236 (240)
|-.+-||++|++..-. . ...+.++|...|+.+.+. +++..++-|=+.++.-..|++.+
T Consensus 4 ~i~v~I~~dG~~~~~~~~~~~~~v~~~~L~~~l~~~~~~------------~~~~~V~I~aD~~~~y~~vv~vm 65 (74)
T 2jwk_A 4 PVILEVAGIGKYAISIGGERQEGLTEEMVTQLSRQEFDK------------DNNTLFLVGGAKEVPYEEVIKAL 65 (74)
T ss_dssp CEEEEECSSSCEEEEETTEEEEEECHHHHHHHHHHHHHH------------CTTCCEEEEECTTSCHHHHHHHH
T ss_pred CEEEEEecCccEEEecCCCcCcccCHHHHHHHHHHHHhh------------CCCceEEEEcCCCCCHHHHHHHH
Confidence 4568899999876542 1 234556688888887765 24556777767666665555443
No 485
>2k9k_A TONB2; metal transport; NMR {Listonella anguillarum}
Probab=25.76 E-value=43 Score=23.03 Aligned_cols=32 Identities=16% Similarity=0.256 Sum_probs=23.4
Q ss_pred ceeEEEEcCCCCeeee-----ccCCCCccchhhhhhh
Q psy299 207 NFTKFIVDKNGAPVER-----HAANASPASLIPNIEK 238 (240)
Q Consensus 207 ~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~ 238 (240)
=...|.||++|++..- .+...+-++.+++|++
T Consensus 42 V~v~f~I~~~G~v~~~~v~~ssg~~~ld~aAl~av~~ 78 (106)
T 2k9k_A 42 VTLSFTIDTTGKAVDINVVDANPKRMFEREAMQALKK 78 (106)
T ss_dssp EEEEEEEETTTEEEEEEEEEESSSSSSHHHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEEEEEcCCcHHHHHHHHHHHHh
Confidence 4578999999998653 3445566788888765
No 486
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=25.63 E-value=2.3e+02 Score=21.85 Aligned_cols=50 Identities=12% Similarity=0.120 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCC--------HHHHHHHHHhcCcce
Q psy299 82 KHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGD--------ADQICEFTKKKNVQF 131 (240)
Q Consensus 82 ~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~--------~e~~~~~~~~~~~~f 131 (240)
.....|+++.+..+..+..+|.++.-......... .+.+++.++++++.|
T Consensus 109 ~~~~~l~~~i~~~~~~g~~vil~tp~p~~~~~~~~~~~~~~~y~~~~~~vA~~~~v~~ 166 (233)
T 1k7c_A 109 TFPAYLENAAKLFTAKGAKVILSSQTPNNPWETGTFVNSPTRFVEYAELAAEVAGVEY 166 (233)
T ss_dssp BHHHHHHHHHHHHHHTTCEEEEECCCCCCTTTTSSCCCCCCHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCccccCCCccccchHHHHHHHHHHHHHhCCeE
Confidence 34667888888888878888877653211000011 256778888888765
No 487
>1iru_A 20S proteasome; cell cycle, immune response, proteolysis, ubiquitin, hydrolase; 2.75A {Bos taurus} SCOP: d.153.1.4 PDB: 3unb_G* 3une_G 3unf_G* 3unh_G
Probab=25.32 E-value=99 Score=24.65 Aligned_cols=58 Identities=7% Similarity=-0.076 Sum_probs=34.9
Q ss_pred ceEEEEcCCCCeEEec-------------------cC--CCCccc----hHHHHHHhcccCCCCcceeEEEEcCCCCeee
Q psy299 167 FTKFIVDKNGVPVERH-------------------AA--NASPAS----LIPHIEILGRTSAIKWNFTKFIVDKNGAPVE 221 (240)
Q Consensus 167 P~~~lID~~G~Iv~~~-------------------~~--~~~~~~----l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~ 221 (240)
|..|.+|+.|...... .. ..+.++ ....|...+...--.++++-.+|+++|...+
T Consensus 149 p~Ly~idp~G~~~~~~~~aiG~gs~~a~~~Le~~~~~~~~ms~eea~~la~~al~~~~~rd~sg~~i~v~vi~~~g~~~~ 228 (246)
T 1iru_A 149 PQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFR 228 (246)
T ss_dssp EEEEEECTTSCEEEBSEEEEETTHHHHHHHHHHHTTSCCCCCHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEETTEEEEE
T ss_pred eEEEEEcCCeeEEEeeEEEECCCcHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHHHhcccCCCCcEEEEEEECCCCeEE
Confidence 7889999999876532 11 223333 2333444443332368999999999886444
Q ss_pred ecc
Q psy299 222 RHA 224 (240)
Q Consensus 222 ~~~ 224 (240)
...
T Consensus 229 ~l~ 231 (246)
T 1iru_A 229 ILT 231 (246)
T ss_dssp ECC
T ss_pred ECC
Confidence 433
No 488
>3kz5_E Protein SOPB; partition, segregation, F plasmid, DNA-binding protein, DNA- DNA binding protein; 1.58A {Escherichia coli}
Probab=25.32 E-value=20 Score=21.81 Aligned_cols=22 Identities=23% Similarity=0.188 Sum_probs=17.2
Q ss_pred CeeeeccCCCCccchhhhhhhc
Q psy299 218 APVERHAANASPASLIPNIEKY 239 (240)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
+|+-.-+++-.|+++|+-||..
T Consensus 22 ~Vsf~Ld~~~iP~~~IeKIE~l 43 (52)
T 3kz5_E 22 KMVLNLDRSRVPTECIEKIEAI 43 (52)
T ss_dssp EEEEEEETTTSCHHHHHHHHHH
T ss_pred eEEEEeccccCCHHHHHHHHHH
Confidence 4556677788999999999874
No 489
>1iru_H 20S proteasome; cell cycle, immune response, proteolysis, ubiquitin, hydrolase; 2.75A {Bos taurus} SCOP: d.153.1.4 PDB: 3unb_N* 3une_N
Probab=25.11 E-value=1.1e+02 Score=23.49 Aligned_cols=24 Identities=4% Similarity=-0.071 Sum_probs=18.0
Q ss_pred CcceeEEEEcCCCCeeeeccCCCC
Q psy299 205 KWNFTKFIVDKNGAPVERHAANAS 228 (240)
Q Consensus 205 ~~~~~~~~i~~~~~~~~~~~~~~~ 228 (240)
.++++-.+|+++|...+.+..+-+
T Consensus 171 ~~~i~v~vi~~~g~~~~~l~~~ei 194 (205)
T 1iru_H 171 GGVIRLAAIAESGVERQVLLGDQI 194 (205)
T ss_dssp CSCEEEEEEETTEEEEEEECGGGS
T ss_pred CCcEEEEEEeCCCeEEEEeChHHh
Confidence 689999999999875555554433
No 490
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=24.65 E-value=85 Score=20.50 Aligned_cols=39 Identities=8% Similarity=0.020 Sum_probs=25.2
Q ss_pred CCC-CcccCCCCCCcEEEEEEecCCCCCcHHHHHHHHHHHH
Q psy299 53 IKG-EDVPLSTYKGHVLVIVNVASRCGYTGKHYKELVELDE 92 (240)
Q Consensus 53 ~~G-~~v~ls~~~gk~vlv~F~atwCp~C~~~~~~L~~l~~ 92 (240)
.|| -.+.|-++.+..+.|-+-+. |..|...-..+++...
T Consensus 22 ~dGGGdvelv~v~~g~V~v~l~Ga-C~gc~Tlk~gIe~~L~ 61 (74)
T 1th5_A 22 GTGGGGLQFLMIKGPIVKVRLTGP-AAVVRTVRIAVSKKLR 61 (74)
T ss_dssp TTTCCCCCCCEEETTEEEECCCSS-SSSSSSHHHHHHHHHH
T ss_pred hcCCCcEEEEEEeCCEEEEEEecC-CcchHHHHHHHHHHHH
Confidence 466 77788777777777777644 8889544334444333
No 491
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=24.52 E-value=3e+02 Score=23.62 Aligned_cols=42 Identities=17% Similarity=0.364 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcce
Q psy299 82 KHYKELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQF 131 (240)
Q Consensus 82 ~~~~~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~f 131 (240)
+..|.+.++.+.++.+|+.++.||-. ..+-++.++++.|+.+
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg--------~~~~v~~ia~~lg~~y 262 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSAS--------FIDIVRAFATDTNNNY 262 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEE--------EHHHHHHHHHCTTSSC
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCC--------cHHHHHHHHHHhCccc
Confidence 45789999999999999999999854 5777888888877654
No 492
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=24.51 E-value=2.9e+02 Score=24.22 Aligned_cols=38 Identities=13% Similarity=0.137 Sum_probs=23.1
Q ss_pred cCcEEEEeecCCCCC-----CCCCCHHHHHHHHHhcCcceeee
Q psy299 97 RGLRILAFPCNQFGG-----QEPGDADQICEFTKKKNVQFDLF 134 (240)
Q Consensus 97 ~~v~vi~Vs~D~~~~-----~~~~~~e~~~~~~~~~~~~fp~~ 134 (240)
.|+.++.+..+..+. +.+..++.+++.+++.+.++-+.
T Consensus 195 lG~~v~~~~~~pDg~f~n~~~~~~~~~~l~~~v~~~~adlgia 237 (443)
T 3i3w_A 195 FGINYVSIASNPDGLNINVGCGATCVSNIKKAVKEQKADLGIS 237 (443)
T ss_dssp TTCEEEESSCCCCSSCTTTTCSTTCHHHHHHHHHHHTCSEEEE
T ss_pred cCCEEEEECCccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEE
Confidence 356777766543221 12345677788888877777665
No 493
>3c8c_A Methyl-accepting chemotaxis protein; structural genomics, unknown function, uncharacterized protein; 1.50A {Vibrio cholerae o1 biovar eltor str}
Probab=24.48 E-value=1.4e+02 Score=22.51 Aligned_cols=51 Identities=18% Similarity=0.142 Sum_probs=32.1
Q ss_pred EEcCC-CCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccC
Q psy299 171 IVDKN-GVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAA 225 (240)
Q Consensus 171 lID~~-G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~ 225 (240)
+.+.+ |+++.......+.+.|.+.+ ....+.-+=.-||+|++|.++....+
T Consensus 126 i~~~~~g~~~Gvl~~~i~~~~l~~~~----~~~~~~~~g~~~l~d~~G~ii~~~~~ 177 (240)
T 3c8c_A 126 VKDSATGQFLGSIFYDVSLAELAELV----NEVKLFDAGYVFIVSEDGTTIAHPKK 177 (240)
T ss_dssp EECTTTCCEEEEEEEEECHHHHHHHH----TCSCCTTSEEEEEEETTSBEEECSSG
T ss_pred EEECCCCeEEEEEEEEEEHHHHHHHH----HhcccCCceEEEEEcCCCcEEEeCCh
Confidence 45654 88877665555555555444 43333344467999999999876443
No 494
>1ryp_E 20S proteasome; multicatalytic proteinase, protein degradation, antigen processing, hydrolase, protease; 1.90A {Saccharomyces cerevisiae} SCOP: d.153.1.4 PDB: 1jd2_D* 1g65_D 2f16_D* 2fak_D* 2fny_D* 2gpl_D* 3d29_D* 3dy3_D* 3dy4_D* 3e47_D* 3gpj_D* 3gpt_D* 3gpw_D* 3hye_D* 3mg0_D* 3mg4_D* 3okj_D* 3shj_D* 3tdd_D* 2z5c_C ...
Probab=24.38 E-value=1.1e+02 Score=24.33 Aligned_cols=52 Identities=8% Similarity=0.061 Sum_probs=30.9
Q ss_pred ceEEEEcCCCCeEEec---cCC----------------CCccc----hHHHHHHhcccCCCCcceeEEEEcCCCC
Q psy299 167 FTKFIVDKNGVPVERH---AAN----------------ASPAS----LIPHIEILGRTSAIKWNFTKFIVDKNGA 218 (240)
Q Consensus 167 P~~~lID~~G~Iv~~~---~~~----------------~~~~~----l~~~L~~ll~~~~i~~~~~~~~i~~~~~ 218 (240)
|..|.+|+.|...... .|. .+.++ ....|...+...--.++++-.+|+++|.
T Consensus 145 p~Ly~idp~G~~~~~~~~aiGsgs~~a~~~Le~~~~~~ms~eea~~la~~al~~~~~~~~sg~~i~v~vi~~~~~ 219 (242)
T 1ryp_E 145 YQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLTLKEAELLVLKILKQVMEEKLDENNAQLSCITKQDG 219 (242)
T ss_dssp EEEEEECTTSCEEEBSEEEESTTHHHHHHHHHHHCCTTCCHHHHHHHHHHHHHHHCSSCCCTTSEEEEEEETTTE
T ss_pred CEEEEECCCCCEeccCEEEECCCCHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHhhccCCCCcEEEEEEECCCC
Confidence 7889999999776522 111 12222 2222333333322268999999999986
No 495
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=24.14 E-value=1.2e+02 Score=20.04 Aligned_cols=57 Identities=11% Similarity=0.078 Sum_probs=37.8
Q ss_pred ceEEEEcCCCCeEEeccCCCCccchHHHHHHhcccCCCCcceeEEEEcCCCCeeeeccCCCCccchhhhh
Q psy299 167 FTKFIVDKNGVPVERHAANASPASLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERHAANASPASLIPNI 236 (240)
Q Consensus 167 P~~~lID~~G~Iv~~~~~~~~~~~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 236 (240)
|-.+.|+++|++..- ....+.++|...|..+.... ++..++-|-+.++.-..+++.+
T Consensus 21 ~i~i~I~~dg~i~~~-~~~v~~~~L~~~l~~~~~~~------------~~~~V~I~aD~~~~y~~vv~vm 77 (99)
T 2pfu_A 21 PVYLSVKADNSMFIG-NDPVTDETMITALNALTEGK------------KDTTIFFRADKTVDYETLMKVM 77 (99)
T ss_dssp CCEEEEETTTEEEET-TEEECSSSHHHHHHHHSSSC------------CSSCEEEEECTTCCHHHHHHHH
T ss_pred CEEEEEeCCCCEEEC-CEecCHHHHHHHHHHHHhcC------------CCceEEEEcCCCCCHHHHHHHH
Confidence 456899999986543 22345677999998887653 4556777777776665554443
No 496
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=24.05 E-value=74 Score=21.76 Aligned_cols=26 Identities=8% Similarity=0.137 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHhhcCcEEEEeec
Q psy299 81 GKHYKELVELDEKFRDRGLRILAFPC 106 (240)
Q Consensus 81 ~~~~~~L~~l~~~~~~~~v~vi~Vs~ 106 (240)
....|.+.++.++++++|+.++.+|-
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~ 42 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSN 42 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeC
Confidence 44678888889999988999988874
No 497
>3u1w_A Hypothetical periplasmic protein; BLIP-like, structural genomics, joint center for structural JCSG, protein structure initiative; 2.00A {Parabacteroides distasonis}
Probab=24.00 E-value=1.5e+02 Score=23.99 Aligned_cols=68 Identities=10% Similarity=0.115 Sum_probs=42.6
Q ss_pred EEEcCCCCeEE-ecc------CCCCccchHHHHHHhcccCCC-Cc-----ceeE----------EEEcCCCCeee---ec
Q psy299 170 FIVDKNGVPVE-RHA------ANASPASLIPHIEILGRTSAI-KW-----NFTK----------FIVDKNGAPVE---RH 223 (240)
Q Consensus 170 ~lID~~G~Iv~-~~~------~~~~~~~l~~~L~~ll~~~~i-~~-----~~~~----------~~i~~~~~~~~---~~ 223 (240)
+.+|++|.++. ... +..-|..+.+.|++-..+..| +| .++- -..|++|...+ .-
T Consensus 115 l~f~~~G~~~~~~~~~~~~~~p~~lP~~i~~~i~~~yp~a~i~~ie~d~~~yEV~l~~g~~~~ev~Fd~~G~w~~~~~~i 194 (253)
T 3u1w_A 115 LYYSQYGNLIKAVDDEINNDAPIVIPKEVSNLMEITFANAELLDIQQNSLGYELDMIDNQIYKVAQLNKDYRWQSTTWAM 194 (253)
T ss_dssp EEECTTCCEEEEEECCTTCCCCCCCCHHHHHHHHHHSTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTCCEEEEEEEC
T ss_pred EEEcCCCCEEEEEecCCCCcCccccCHHHHHHHHHhCCCCceEEEEEcCCcEEEEEecCCEEEEEEECCCCCEEEEEEec
Confidence 78999999995 332 122234466666666555544 22 2222 34467887775 25
Q ss_pred cCCCCccchhhhhh
Q psy299 224 AANASPASLIPNIE 237 (240)
Q Consensus 224 ~~~~~~~~~~~~~~ 237 (240)
..+.+|++|+.+|.
T Consensus 195 ~~~~lP~~V~~~i~ 208 (253)
T 3u1w_A 195 SEQEVPQIVMQGFE 208 (253)
T ss_dssp CGGGSCHHHHHHHH
T ss_pred CchhCCHHHHHHHH
Confidence 66689999999997
No 498
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=23.91 E-value=92 Score=22.94 Aligned_cols=44 Identities=16% Similarity=0.212 Sum_probs=30.0
Q ss_pred HHHHHHHHHhhcCcEEEEeecCCCCCCCCCCHHHHHHHHHhcCcceeee
Q psy299 86 ELVELDEKFRDRGLRILAFPCNQFGGQEPGDADQICEFTKKKNVQFDLF 134 (240)
Q Consensus 86 ~L~~l~~~~~~~~v~vi~Vs~D~~~~~~~~~~e~~~~~~~~~~~~fp~~ 134 (240)
...+..++++++|+.|+.++-- .......+.+++++++++++.+
T Consensus 28 ~~~~al~~l~~~G~~iii~TgR-----~~~~~~~~~~~l~~~gi~~~~I 71 (142)
T 2obb_A 28 FAVETLKLLQQEKHRLILWSVR-----EGELLDEAIEWCRARGLEFYAA 71 (142)
T ss_dssp THHHHHHHHHHTTCEEEECCSC-----CHHHHHHHHHHHHTTTCCCSEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCC-----CcccHHHHHHHHHHcCCCeEEE
Confidence 4455555666778988877621 0013678888999999988766
No 499
>1w63_Q Adapter-related protein complex 1 sigma 1A subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=23.66 E-value=1.5e+02 Score=22.06 Aligned_cols=68 Identities=7% Similarity=0.045 Sum_probs=36.1
Q ss_pred eEEEEcCCCCeEE-eccCCCCcc---chHHHHHHhcccCCCCcceeEEEEcCCCCeeeec----------cCCCCccchh
Q psy299 168 TKFIVDKNGVPVE-RHAANASPA---SLIPHIEILGRTSAIKWNFTKFIVDKNGAPVERH----------AANASPASLI 233 (240)
Q Consensus 168 ~~~lID~~G~Iv~-~~~~~~~~~---~l~~~L~~ll~~~~i~~~~~~~~i~~~~~~~~~~----------~~~~~~~~~~ 233 (240)
..+++|++|+++- ++.....+. .+.+.+-+++..++- +...|+--++-+.+++. +.+..|..++
T Consensus 4 ~i~Il~~~Gk~~lsk~y~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~i~~~~~~~vy~~~~~Lyfv~~~~~~~Nel~~l 81 (158)
T 1w63_Q 4 FMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKP--KMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITL 81 (158)
T ss_dssp EEEEECSSSCEEEEEESSCCCHHHHHHHHHHHHHHHHTSCS--SSCSEEEETTEEEEEEEETTEEEEEEECSSSCHHHHH
T ss_pred EEEEECCCCCEEEEEeCCCCCHHHHHHHHHHHHHHHhccCC--CCCCeEEECCEEEEEEEECCEEEEEEecCCCCHHHHH
Confidence 4589999998775 444433433 355555555544321 12233344555666662 2344555555
Q ss_pred hhhh
Q psy299 234 PNIE 237 (240)
Q Consensus 234 ~~~~ 237 (240)
+.|.
T Consensus 82 e~L~ 85 (158)
T 1w63_Q 82 ELIH 85 (158)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 500
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=23.50 E-value=2.6e+02 Score=24.72 Aligned_cols=38 Identities=16% Similarity=0.158 Sum_probs=23.5
Q ss_pred cCcEEEEeecCCCCC-----CCCCCHHHHHHHHHhcCcceeee
Q psy299 97 RGLRILAFPCNQFGG-----QEPGDADQICEFTKKKNVQFDLF 134 (240)
Q Consensus 97 ~~v~vi~Vs~D~~~~-----~~~~~~e~~~~~~~~~~~~fp~~ 134 (240)
.|+.++.+..+..+. +.+.+++.+++.+++.+.++-+.
T Consensus 217 lG~~v~~l~~~pDg~f~n~~~~~~~~~~l~~~v~~~~adlgia 259 (469)
T 3pdk_A 217 LEADISTMGTSPNGMNINDGVGSTHPEVLAELVKEKGADIGLA 259 (469)
T ss_dssp TTCEEEEESCCCCSSCTTSSCSTTSTHHHHHHHHHHTCSEEEE
T ss_pred cCCEEEEECCCcCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEE
Confidence 357777776553221 12245677888888888777665
Done!