Query psy2990
Match_columns 162
No_of_seqs 129 out of 1729
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 22:42:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2990.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2990hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.8 5.8E-20 2E-24 152.2 8.2 102 56-162 30-135 (510)
2 1u19_A Rhodopsin; G protein-co 99.8 2E-18 7E-23 134.7 10.7 101 55-162 35-136 (349)
3 2lnl_A C-X-C chemokine recepto 99.8 2.1E-18 7.3E-23 132.7 9.5 95 59-162 12-107 (296)
4 2ks9_A Substance-P receptor; w 99.7 8.9E-18 3.1E-22 132.2 11.5 97 59-162 33-130 (364)
5 2rh1_A Beta-2-adrenergic recep 99.7 5.1E-18 1.8E-22 139.9 8.2 97 59-162 41-138 (500)
6 4dkl_A MU-type opioid receptor 99.7 2.1E-17 7.2E-22 133.5 9.4 97 58-162 17-114 (464)
7 3uon_A Human M2 muscarinic ace 99.7 1.4E-17 4.9E-22 134.7 8.0 97 59-162 24-121 (467)
8 3odu_A C-X-C chemokine recepto 99.7 4.4E-17 1.5E-21 133.1 9.3 99 55-162 45-144 (502)
9 3v2y_A Sphingosine 1-phosphate 99.7 1.7E-17 5.9E-22 137.6 6.7 96 59-162 64-160 (520)
10 3pbl_A D(3) dopamine receptor, 99.7 2.1E-17 7.2E-22 134.4 6.9 97 60-162 40-137 (481)
11 3rze_A Histamine H1 receptor, 99.7 3.4E-17 1.2E-21 132.0 7.1 96 60-162 10-106 (452)
12 4amj_A Beta-1 adrenergic recep 99.7 3.5E-17 1.2E-21 125.6 6.6 97 59-162 12-109 (315)
13 3vw7_A Proteinase-activated re 99.7 6.3E-17 2.2E-21 131.6 7.5 98 58-162 20-118 (484)
14 3eml_A Human adenosine A2A rec 99.7 9.1E-17 3.1E-21 130.5 6.8 95 59-162 22-117 (488)
15 4ea3_A Fusion protein of nocic 99.7 1.9E-16 6.4E-21 128.2 8.5 97 58-162 125-222 (434)
16 3sn6_R Lysozyme, beta-2 adrene 99.7 1.6E-16 5.4E-21 131.3 7.7 97 59-162 183-280 (514)
17 4eiy_A Adenosine receptor A2A/ 99.7 1.4E-16 5E-21 128.2 7.3 96 58-162 31-127 (447)
18 2z73_A Rhodopsin; visual pigme 99.6 3.7E-16 1.3E-20 126.6 9.3 98 58-162 34-133 (448)
19 2lot_A Apelin receptor; membra 97.1 4E-05 1.4E-09 45.8 -1.2 27 60-86 30-57 (64)
20 1hll_A Alpha-2A adrenergic rec 92.8 0.03 1E-06 27.8 0.7 13 150-162 2-14 (32)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.80 E-value=5.8e-20 Score=152.20 Aligned_cols=102 Identities=20% Similarity=0.348 Sum_probs=86.5
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhheehh-eecCC---CCChhHHHHHHHHHHHHHHHHhhhhHHHHHHHhcCCcccccccc
Q psy2990 56 YAQPMYGYVMPFLLLITIIANTLIVVV-LSKRH---MRTPTNAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVA 131 (162)
Q Consensus 56 ~~~~~~~~~~~~i~~~gi~gN~~vl~v-~~~~~---l~~~~~~~i~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~ 131 (162)
+...+..++|.+++++|++||++|+++ +++|+ +|+++|+|++|||++|++++++.+|+.+.........|.+ |+.
T Consensus 30 ~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~-g~~ 108 (510)
T 4grv_A 30 YSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAF-GDA 108 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSS-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEh-hHH
Confidence 334577889999999999999999854 56554 4578999999999999999999999988866555557866 999
Q ss_pred chhhhhhHhhhhhhHHHHHHHHHHhhhhccC
Q psy2990 132 ACYAWNIMNEVIPTLFHTASIWLTLALAVQR 162 (162)
Q Consensus 132 ~C~~~~~~~~~~~~~~~~~s~~~l~~isidR 162 (162)
.|++..++. .++..+|+++|++||+||
T Consensus 109 ~C~~~~~~~----~~~~~~S~~~l~~is~dR 135 (510)
T 4grv_A 109 GCRGYYFLR----DACTYATALNVASLSVAR 135 (510)
T ss_dssp HHHHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH----HHHHHHHHHHHHHHHHHh
Confidence 999999988 999999999999999998
No 2
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.77 E-value=2e-18 Score=134.70 Aligned_cols=101 Identities=24% Similarity=0.403 Sum_probs=88.3
Q ss_pred chhhhHHHHHHHHHHHHHHhhhhheehh-eecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHHHhcCCccccccccch
Q psy2990 55 RYAQPMYGYVMPFLLLITIIANTLIVVV-LSKRHMRTPTNAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAAC 133 (162)
Q Consensus 55 ~~~~~~~~~~~~~i~~~gi~gN~~vl~v-~~~~~l~~~~~~~i~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C 133 (162)
+....+..+++.+++++|++||++++++ .++|++|++.|++++|||++|++.+++..|..+.....+ .|.+ |...|
T Consensus 35 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~--~~~~-~~~~C 111 (349)
T 1u19_A 35 PWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHG--YFVF-GPTGC 111 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHT--SCTT-HHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcC--eeeC-ChhHH
Confidence 3444577888999999999999999865 688899999999999999999999999999888765555 6755 88999
Q ss_pred hhhhhHhhhhhhHHHHHHHHHHhhhhccC
Q psy2990 134 YAWNIMNEVIPTLFHTASIWLTLALAVQR 162 (162)
Q Consensus 134 ~~~~~~~~~~~~~~~~~s~~~l~~isidR 162 (162)
++..++. ..+..+|++++++||+||
T Consensus 112 ~~~~~~~----~~~~~~s~~~l~~isidR 136 (349)
T 1u19_A 112 NLEGFFA----TLGGEIALWSLVVLAIER 136 (349)
T ss_dssp HHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH----HHHHHHHHHHHHHHHHHH
Confidence 9999988 899999999999999998
No 3
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.76 E-value=2.1e-18 Score=132.67 Aligned_cols=95 Identities=19% Similarity=0.288 Sum_probs=82.7
Q ss_pred hHHHHHHHHHHHHHHhhhhheeh-heecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHHHhcCCccccccccchhhhh
Q psy2990 59 PMYGYVMPFLLLITIIANTLIVV-VLSKRHMRTPTNAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWN 137 (162)
Q Consensus 59 ~~~~~~~~~i~~~gi~gN~~vl~-v~~~~~l~~~~~~~i~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~ 137 (162)
.+..++|.+++++|++||+++++ +.++|++|+++|+|+.|||++|++.++ ..|...... .. .|.+ |+..|+...
T Consensus 12 ~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~-~~--~~~~-~~~~c~~~~ 86 (296)
T 2lnl_A 12 YVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASK-VN--GWIF-GTFLCKVVS 86 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHH-HS--SSCC-SSHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhHHHhhc-cC--CCcc-chhHHHHHh
Confidence 46778899999999999999985 578899999999999999999999876 567666533 34 5755 999999999
Q ss_pred hHhhhhhhHHHHHHHHHHhhhhccC
Q psy2990 138 IMNEVIPTLFHTASIWLTLALAVQR 162 (162)
Q Consensus 138 ~~~~~~~~~~~~~s~~~l~~isidR 162 (162)
++. ..+..+|++++++||+||
T Consensus 87 ~~~----~~~~~~s~~~l~~isidR 107 (296)
T 2lnl_A 87 LLK----EVNFYSGILLLACISVDR 107 (296)
T ss_dssp HHH----HHHHHHHHHHHHHHHHHH
T ss_pred hhh----hhhHHHHHHHHHHHHhhh
Confidence 988 899999999999999998
No 4
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.75 E-value=8.9e-18 Score=132.22 Aligned_cols=97 Identities=20% Similarity=0.257 Sum_probs=86.1
Q ss_pred hHHHHHHHHHHHHHHhhhhheeh-heecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHHHhcCCccccccccchhhhh
Q psy2990 59 PMYGYVMPFLLLITIIANTLIVV-VLSKRHMRTPTNAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWN 137 (162)
Q Consensus 59 ~~~~~~~~~i~~~gi~gN~~vl~-v~~~~~l~~~~~~~i~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~ 137 (162)
.+..+++.+++++|++||+++++ +.++|++|++.|++++|||++|++.+++..|..+.....+ .|.+ |+..|++..
T Consensus 33 ~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~--~~~~-~~~~C~~~~ 109 (364)
T 2ks9_A 33 VLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHN--EWYY-GLFYCKFHN 109 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHT--SCSS-CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--Cccc-hHHHHHhHH
Confidence 35578899999999999999986 4788999999999999999999999998999888765555 6755 889999999
Q ss_pred hHhhhhhhHHHHHHHHHHhhhhccC
Q psy2990 138 IMNEVIPTLFHTASIWLTLALAVQR 162 (162)
Q Consensus 138 ~~~~~~~~~~~~~s~~~l~~isidR 162 (162)
++. ..+..+|++++++||+||
T Consensus 110 ~~~----~~~~~~s~~~l~~isidR 130 (364)
T 2ks9_A 110 FFP----IAAVFASIYSMTAVAFDR 130 (364)
T ss_dssp HHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHH----HHHHHHHHHHHHHHHHHH
Confidence 988 899999999999999998
No 5
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.73 E-value=5.1e-18 Score=139.90 Aligned_cols=97 Identities=24% Similarity=0.288 Sum_probs=87.2
Q ss_pred hHHHHHHHHHHHHHHhhhhheehh-eecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHHHhcCCccccccccchhhhh
Q psy2990 59 PMYGYVMPFLLLITIIANTLIVVV-LSKRHMRTPTNAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWN 137 (162)
Q Consensus 59 ~~~~~~~~~i~~~gi~gN~~vl~v-~~~~~l~~~~~~~i~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~ 137 (162)
.+..+++.+++++|++||++++++ +++|++|+++|+|++|||++|++.+++.+|..+.....+ .|.+ |...|++..
T Consensus 41 ~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~--~w~~-~~~~C~~~~ 117 (500)
T 2rh1_A 41 VGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMK--MWTF-GNFWCEFWT 117 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHT--SCCS-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCcC-CcchhhHHH
Confidence 367788999999999999999864 678899999999999999999999999999988866655 7865 899999999
Q ss_pred hHhhhhhhHHHHHHHHHHhhhhccC
Q psy2990 138 IMNEVIPTLFHTASIWLTLALAVQR 162 (162)
Q Consensus 138 ~~~~~~~~~~~~~s~~~l~~isidR 162 (162)
++. .++.++|++++++||+||
T Consensus 118 ~~~----~~~~~~Si~~l~~isidR 138 (500)
T 2rh1_A 118 SID----VLCVTASIETLCVIAVDR 138 (500)
T ss_dssp HHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHH----HHHHHHHHHHHHHHHHHH
Confidence 988 899999999999999998
No 6
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.71 E-value=2.1e-17 Score=133.51 Aligned_cols=97 Identities=20% Similarity=0.264 Sum_probs=86.7
Q ss_pred hhHHHHHHHHHHHHHHhhhhheehh-eecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHHHhcCCccccccccchhhh
Q psy2990 58 QPMYGYVMPFLLLITIIANTLIVVV-LSKRHMRTPTNAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAW 136 (162)
Q Consensus 58 ~~~~~~~~~~i~~~gi~gN~~vl~v-~~~~~l~~~~~~~i~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~ 136 (162)
..+..+++.+++++|++||++++++ .++|++|+++|+|++|||++|++.++. +|..+.....+ .|.+ |...|++.
T Consensus 17 ~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~--~~~~-~~~~C~~~ 92 (464)
T 4dkl_A 17 AITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMG--TWPF-GNILCKIV 92 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHS--SCCS-CSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhC--Cccc-ccchhhhH
Confidence 3477889999999999999999864 688899999999999999999999886 89888877666 7766 99999999
Q ss_pred hhHhhhhhhHHHHHHHHHHhhhhccC
Q psy2990 137 NIMNEVIPTLFHTASIWLTLALAVQR 162 (162)
Q Consensus 137 ~~~~~~~~~~~~~~s~~~l~~isidR 162 (162)
.++. .++..+|++++++||+||
T Consensus 93 ~~~~----~~~~~~s~~~l~~is~dR 114 (464)
T 4dkl_A 93 ISID----YYNMFTSIFTLCTMSVDR 114 (464)
T ss_dssp HHHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHHH----HHHHHHHHHHHHHHHHHH
Confidence 9988 999999999999999998
No 7
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.71 E-value=1.4e-17 Score=134.74 Aligned_cols=97 Identities=28% Similarity=0.415 Sum_probs=87.4
Q ss_pred hHHHHHHHHHHHHHHhhhhheehh-eecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHHHhcCCccccccccchhhhh
Q psy2990 59 PMYGYVMPFLLLITIIANTLIVVV-LSKRHMRTPTNAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWN 137 (162)
Q Consensus 59 ~~~~~~~~~i~~~gi~gN~~vl~v-~~~~~l~~~~~~~i~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~ 137 (162)
.+..+++.+++++|++||++++++ .++|++|++.|+|++|||++|++.+++.+|..+.....+ .|.+ |...|++..
T Consensus 24 ~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~--~~~~-~~~~C~~~~ 100 (467)
T 3uon_A 24 VFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIG--YWPL-GPVVCDLWL 100 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSS--SCCS-CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CccC-CcchHhHHH
Confidence 467788999999999999999865 678899999999999999999999999999888866655 7755 899999999
Q ss_pred hHhhhhhhHHHHHHHHHHhhhhccC
Q psy2990 138 IMNEVIPTLFHTASIWLTLALAVQR 162 (162)
Q Consensus 138 ~~~~~~~~~~~~~s~~~l~~isidR 162 (162)
++. .++.++|++++++||+||
T Consensus 101 ~~~----~~~~~~s~~~l~~isidR 121 (467)
T 3uon_A 101 ALD----YVVSNASVMNLLIISFDR 121 (467)
T ss_dssp HHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHH----HHHHHHHHHHHHHHHHHH
Confidence 988 999999999999999998
No 8
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.70 E-value=4.4e-17 Score=133.14 Aligned_cols=99 Identities=15% Similarity=0.318 Sum_probs=85.5
Q ss_pred chhhhHHHHHHHHHHHHHHhhhhheehh-eecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHHHhcCCccccccccch
Q psy2990 55 RYAQPMYGYVMPFLLLITIIANTLIVVV-LSKRHMRTPTNAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAAC 133 (162)
Q Consensus 55 ~~~~~~~~~~~~~i~~~gi~gN~~vl~v-~~~~~l~~~~~~~i~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C 133 (162)
.....+..+++.+++++|++||++++++ .++|++|+++|+|++|||++|++.+ +.+|..+.... . .|.+ |...|
T Consensus 45 ~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~-~--~~~~-~~~~C 119 (502)
T 3odu_A 45 NFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAV-A--NWYF-GNFLC 119 (502)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHH-T--CCCS-HHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHh-c--CCcC-Cchhh
Confidence 3344578889999999999999999865 6888999999999999999999996 58898877443 4 5755 88899
Q ss_pred hhhhhHhhhhhhHHHHHHHHHHhhhhccC
Q psy2990 134 YAWNIMNEVIPTLFHTASIWLTLALAVQR 162 (162)
Q Consensus 134 ~~~~~~~~~~~~~~~~~s~~~l~~isidR 162 (162)
++..++. .++..+|++++++||+||
T Consensus 120 ~~~~~~~----~~~~~~s~~~l~~is~dR 144 (502)
T 3odu_A 120 KAVHVIY----TVNLYSSVWILAFISLDR 144 (502)
T ss_dssp HHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHH----HHHHHHHHHHHHHHHHHH
Confidence 9999988 899999999999999998
No 9
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.69 E-value=1.7e-17 Score=137.56 Aligned_cols=96 Identities=18% Similarity=0.214 Sum_probs=84.4
Q ss_pred hHHHHHHHHHHHHHHhhhhheehh-eecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHHHhcCCccccccccchhhhh
Q psy2990 59 PMYGYVMPFLLLITIIANTLIVVV-LSKRHMRTPTNAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWN 137 (162)
Q Consensus 59 ~~~~~~~~~i~~~gi~gN~~vl~v-~~~~~l~~~~~~~i~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~ 137 (162)
.+..+++.+++++|++||++++++ .++|++|+++|+|++|||++|++++++..|..+.. ... .|.+ +...|++..
T Consensus 64 ~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~--~~~~-~~~~c~~~~ 139 (520)
T 3v2y_A 64 KLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GAT--TYKL-TPAQWFLRE 139 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG--GTTS-CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-ccc--ceee-CccccchHH
Confidence 477889999999999999999965 68899999999999999999999999888877764 223 5655 888999988
Q ss_pred hHhhhhhhHHHHHHHHHHhhhhccC
Q psy2990 138 IMNEVIPTLFHTASIWLTLALAVQR 162 (162)
Q Consensus 138 ~~~~~~~~~~~~~s~~~l~~isidR 162 (162)
++. ..+.++|+++|++||+||
T Consensus 140 ~~~----~~~~~~S~~~l~~isidR 160 (520)
T 3v2y_A 140 GSM----FVALSASVFSLLAIAIER 160 (520)
T ss_dssp HHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHH----HHHHHHHHHHHHHHHHHH
Confidence 887 899999999999999998
No 10
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.69 E-value=2.1e-17 Score=134.36 Aligned_cols=97 Identities=25% Similarity=0.505 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHhhhhheeh-heecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHHHhcCCccccccccchhhhhh
Q psy2990 60 MYGYVMPFLLLITIIANTLIVV-VLSKRHMRTPTNAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNI 138 (162)
Q Consensus 60 ~~~~~~~~i~~~gi~gN~~vl~-v~~~~~l~~~~~~~i~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~~ 138 (162)
++.+++.+++++|++||+++++ +.++|++|+++|+|++|||++|++.+++.+|..+..... ...|.+ +...|++..+
T Consensus 40 ~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~-~~~~~~-~~~~C~~~~~ 117 (481)
T 3pbl_A 40 YYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVT-GGVWNF-SRICCDVFVT 117 (481)
T ss_dssp -CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHT-TSCCCS-CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcccc-CcchhhhHHH
Confidence 5667889999999999999985 468899999999999999999999999899988875443 236755 8999999999
Q ss_pred HhhhhhhHHHHHHHHHHhhhhccC
Q psy2990 139 MNEVIPTLFHTASIWLTLALAVQR 162 (162)
Q Consensus 139 ~~~~~~~~~~~~s~~~l~~isidR 162 (162)
+. .++..+|++++++||+||
T Consensus 118 ~~----~~~~~~s~~~l~~is~dR 137 (481)
T 3pbl_A 118 LD----VMMCTASIWNLCAISIDR 137 (481)
T ss_dssp HH----HHHHHHHHHHHHHHHHHH
T ss_pred HH----HHHHHHHHHHHHHHHHHH
Confidence 88 899999999999999998
No 11
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.68 E-value=3.4e-17 Score=132.00 Aligned_cols=96 Identities=23% Similarity=0.322 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHhhhhheeh-heecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHHHhcCCccccccccchhhhhh
Q psy2990 60 MYGYVMPFLLLITIIANTLIVV-VLSKRHMRTPTNAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNI 138 (162)
Q Consensus 60 ~~~~~~~~i~~~gi~gN~~vl~-v~~~~~l~~~~~~~i~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~~ 138 (162)
+..+++.+++++|++||+++++ +.++|++|++.|+|++|||++|++.+++.+|..+.....+ .|.+ |...|++..+
T Consensus 10 ~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~--~~~~-~~~~C~~~~~ 86 (452)
T 3rze_A 10 PLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMS--KWSL-GRPLCLFWLS 86 (452)
T ss_dssp GGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSS--SCSS-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CccC-CchhHhHHHH
Confidence 5667899999999999999986 5688899999999999999999999999999998866655 7755 8999999999
Q ss_pred HhhhhhhHHHHHHHHHHhhhhccC
Q psy2990 139 MNEVIPTLFHTASIWLTLALAVQR 162 (162)
Q Consensus 139 ~~~~~~~~~~~~s~~~l~~isidR 162 (162)
+. ..+..+|++++++||+||
T Consensus 87 ~~----~~~~~~s~~~l~~is~dR 106 (452)
T 3rze_A 87 MD----YVASTASIFSVFILCIDR 106 (452)
T ss_dssp HH----HHHHHHHHHHHHHHHHHH
T ss_pred HH----HHHHHHHHHHHHHHHHHH
Confidence 88 999999999999999998
No 12
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.68 E-value=3.5e-17 Score=125.64 Aligned_cols=97 Identities=23% Similarity=0.325 Sum_probs=86.9
Q ss_pred hHHHHHHHHHHHHHHhhhhheehh-eecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHHHhcCCccccccccchhhhh
Q psy2990 59 PMYGYVMPFLLLITIIANTLIVVV-LSKRHMRTPTNAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWN 137 (162)
Q Consensus 59 ~~~~~~~~~i~~~gi~gN~~vl~v-~~~~~l~~~~~~~i~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~ 137 (162)
....+++.+++++|++||++++++ .++|++|++.|++++|||++|++.+++..|..+.....+ .|.+ |...|++..
T Consensus 12 ~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~--~~~~-~~~~C~~~~ 88 (315)
T 4amj_A 12 AGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRG--TWLW-GSFLCELWT 88 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHS--SCCS-CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcC--Ceec-cccHHHHHH
Confidence 467788999999999999999865 688899999999999999999999998999888766655 7755 899999999
Q ss_pred hHhhhhhhHHHHHHHHHHhhhhccC
Q psy2990 138 IMNEVIPTLFHTASIWLTLALAVQR 162 (162)
Q Consensus 138 ~~~~~~~~~~~~~s~~~l~~isidR 162 (162)
++. ..+..+|++++++||+||
T Consensus 89 ~~~----~~~~~~S~~~l~~isidR 109 (315)
T 4amj_A 89 SLD----VLCVTASIETLCVIAIDR 109 (315)
T ss_dssp HHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHH----HHHHHHHHHHHHHHHHHH
Confidence 988 999999999999999998
No 13
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.67 E-value=6.3e-17 Score=131.63 Aligned_cols=98 Identities=15% Similarity=0.189 Sum_probs=83.3
Q ss_pred hhHHHHHHHHHHHHHHhhhhheeh-heecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHHHhcCCccccccccchhhh
Q psy2990 58 QPMYGYVMPFLLLITIIANTLIVV-VLSKRHMRTPTNAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAW 136 (162)
Q Consensus 58 ~~~~~~~~~~i~~~gi~gN~~vl~-v~~~~~l~~~~~~~i~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~ 136 (162)
..+..+++.+++++|++||+++++ +.++|++|+++|+|++|||++|++.++ .+|..+..... ...|.+ |...|++.
T Consensus 20 ~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~-~~~~~~~~~~~-~~~~~~-~~~~C~~~ 96 (484)
T 3vw7_A 20 TLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVS-VLPFKISYYFS-GSDWQF-GSELCRFV 96 (484)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHT-THHHHHHHHHT-TSCCCS-CHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHh-cCCccc-chhHHhHH
Confidence 347888999999999999999986 468889999999999999999999976 46666654433 236755 99999999
Q ss_pred hhHhhhhhhHHHHHHHHHHhhhhccC
Q psy2990 137 NIMNEVIPTLFHTASIWLTLALAVQR 162 (162)
Q Consensus 137 ~~~~~~~~~~~~~~s~~~l~~isidR 162 (162)
.++. .++..+|++++++||+||
T Consensus 97 ~~~~----~~~~~~S~~~l~~is~dR 118 (484)
T 3vw7_A 97 TAAF----YCNMYASILLMTVISIDR 118 (484)
T ss_dssp HHHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHHH----HHHHHHHHHHHHHHHHHH
Confidence 9988 999999999999999998
No 14
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.66 E-value=9.1e-17 Score=130.53 Aligned_cols=95 Identities=18% Similarity=0.264 Sum_probs=83.7
Q ss_pred hHHHHHHHHHHHHHHhhhhheehh-eecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHHHhcCCccccccccchhhhh
Q psy2990 59 PMYGYVMPFLLLITIIANTLIVVV-LSKRHMRTPTNAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWN 137 (162)
Q Consensus 59 ~~~~~~~~~i~~~gi~gN~~vl~v-~~~~~l~~~~~~~i~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~ 137 (162)
.++.+++.+++++|++||++++++ .++|++|+++|+|++|||++|++.+++.+|..+... . .|.+ +...|++..
T Consensus 22 ~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~--~--~~~~-~~~~C~~~~ 96 (488)
T 3eml_A 22 SVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--T--GFCA-ACHGCLFIA 96 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHT--T--CCEE-CHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHh--c--cccc-cchHHHHHH
Confidence 477789999999999999999864 688899999999999999999999999999877632 2 4544 888999999
Q ss_pred hHhhhhhhHHHHHHHHHHhhhhccC
Q psy2990 138 IMNEVIPTLFHTASIWLTLALAVQR 162 (162)
Q Consensus 138 ~~~~~~~~~~~~~s~~~l~~isidR 162 (162)
++. .++.++|++++++||+||
T Consensus 97 ~~~----~~~~~~s~~~l~~is~dR 117 (488)
T 3eml_A 97 CFV----LVLTQSSIFSLLAIAIDR 117 (488)
T ss_dssp HHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHH----HHHHHHHHHHHHHHHHHh
Confidence 988 899999999999999998
No 15
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.66 E-value=1.9e-16 Score=128.23 Aligned_cols=97 Identities=21% Similarity=0.280 Sum_probs=85.7
Q ss_pred hhHHHHHHHHHHHHHHhhhhheeh-heecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHHHhcCCccccccccchhhh
Q psy2990 58 QPMYGYVMPFLLLITIIANTLIVV-VLSKRHMRTPTNAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAW 136 (162)
Q Consensus 58 ~~~~~~~~~~i~~~gi~gN~~vl~-v~~~~~l~~~~~~~i~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~ 136 (162)
+.+..+++.+++++|++||+++++ +.++|++|+++|+|++|||++|++. .+.+|..+.....+ .|++ +...|++.
T Consensus 125 ~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~--~~~~-~~~~C~~~ 200 (434)
T 4ea3_A 125 KVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLG--FWPF-GNALCKTV 200 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHT--SCTT-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhc--CCcC-cccHHHHH
Confidence 346778899999999999999986 5788999999999999999999998 55889888877666 6755 89999999
Q ss_pred hhHhhhhhhHHHHHHHHHHhhhhccC
Q psy2990 137 NIMNEVIPTLFHTASIWLTLALAVQR 162 (162)
Q Consensus 137 ~~~~~~~~~~~~~~s~~~l~~isidR 162 (162)
.++. ..+..+|++++++||+||
T Consensus 201 ~~~~----~~~~~~S~~~l~~isidR 222 (434)
T 4ea3_A 201 IAID----YYNMFTSTFTLTAMSVDR 222 (434)
T ss_dssp HHHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHHH----HHHHHHHHHHHHHHHHHH
Confidence 9988 899999999999999998
No 16
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.65 E-value=1.6e-16 Score=131.31 Aligned_cols=97 Identities=24% Similarity=0.280 Sum_probs=87.5
Q ss_pred hHHHHHHHHHHHHHHhhhhheeh-heecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHHHhcCCccccccccchhhhh
Q psy2990 59 PMYGYVMPFLLLITIIANTLIVV-VLSKRHMRTPTNAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWN 137 (162)
Q Consensus 59 ~~~~~~~~~i~~~gi~gN~~vl~-v~~~~~l~~~~~~~i~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~ 137 (162)
.+..+++.+++++|++||+++++ +.++|++|++.|+|++|||++|++.+++.+|..+.....+ .|.+ +...|++..
T Consensus 183 ~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~--~~~~-~~~~C~~~~ 259 (514)
T 3sn6_R 183 VGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTK--TWTF-GNFWCEFWT 259 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHT--SCCS-CSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcC--CeeC-CcchhhhHH
Confidence 46778999999999999999986 5688899999999999999999999999999888876665 7755 899999999
Q ss_pred hHhhhhhhHHHHHHHHHHhhhhccC
Q psy2990 138 IMNEVIPTLFHTASIWLTLALAVQR 162 (162)
Q Consensus 138 ~~~~~~~~~~~~~s~~~l~~isidR 162 (162)
++. .++..+|++++++||+||
T Consensus 260 ~l~----~~~~~~S~~~l~~isidR 280 (514)
T 3sn6_R 260 SID----VLCVTASIETLCVIAVDR 280 (514)
T ss_dssp HHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHH----HHHHHHHHHHHHHHHHHH
Confidence 988 899999999999999998
No 17
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.65 E-value=1.4e-16 Score=128.16 Aligned_cols=96 Identities=18% Similarity=0.262 Sum_probs=83.7
Q ss_pred hhHHHHHHHHHHHHHHhhhhheehh-eecCCCCChhHHHHHHHHHHHHHHHHhhhhHHHHHHHhcCCccccccccchhhh
Q psy2990 58 QPMYGYVMPFLLLITIIANTLIVVV-LSKRHMRTPTNAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAW 136 (162)
Q Consensus 58 ~~~~~~~~~~i~~~gi~gN~~vl~v-~~~~~l~~~~~~~i~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~ 136 (162)
..+..+++.+++++|++||++++++ .++|++|+++|+|++|||++|++.+++.+|..+... . .|.+ +...|++.
T Consensus 31 ~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~--~--~~~~-~~~~C~~~ 105 (447)
T 4eiy_A 31 SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--T--GFCA-ACHGCLFI 105 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH--T--TCEE-EHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--c--cccc-CccHHHHH
Confidence 3477889999999999999999864 678899999999999999999999999999877632 2 4434 88899999
Q ss_pred hhHhhhhhhHHHHHHHHHHhhhhccC
Q psy2990 137 NIMNEVIPTLFHTASIWLTLALAVQR 162 (162)
Q Consensus 137 ~~~~~~~~~~~~~~s~~~l~~isidR 162 (162)
.++. ..+..+|++++++||+||
T Consensus 106 ~~~~----~~~~~~S~~~l~~is~dR 127 (447)
T 4eiy_A 106 ACFV----LVLTQSSIFSLLAIAIDR 127 (447)
T ss_dssp HHHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHHH----HHHHHHHHHHHHHHHHHH
Confidence 9988 899999999999999998
No 18
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.65 E-value=3.7e-16 Score=126.58 Aligned_cols=98 Identities=18% Similarity=0.273 Sum_probs=85.0
Q ss_pred hhHHHHHHHHHHHHHHhhhhheehh-eecCCCCChhHHHHHHHHHHHHHHHHh-hhhHHHHHHHhcCCccccccccchhh
Q psy2990 58 QPMYGYVMPFLLLITIIANTLIVVV-LSKRHMRTPTNAVLMAMALSDMFTLLF-PAPWLFYMYTFGNHYKPLSPVAACYA 135 (162)
Q Consensus 58 ~~~~~~~~~~i~~~gi~gN~~vl~v-~~~~~l~~~~~~~i~nLa~~Dll~~~~-~~p~~~~~~~~~~~~~~~~~~~~C~~ 135 (162)
..+..+++.+++++|++||++++++ .++|++|++.|++++|||++|++.+++ .+|..+.....+ .|.+ +...|++
T Consensus 34 ~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~--~~~~-~~~~C~~ 110 (448)
T 2z73_A 34 YYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLK--KWIF-GFAACKV 110 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTT--SCCS-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcC--CccC-CHHHHHH
Confidence 3467788999999999999999865 678889999999999999999999887 488887755544 6744 8899999
Q ss_pred hhhHhhhhhhHHHHHHHHHHhhhhccC
Q psy2990 136 WNIMNEVIPTLFHTASIWLTLALAVQR 162 (162)
Q Consensus 136 ~~~~~~~~~~~~~~~s~~~l~~isidR 162 (162)
..++. ..+..+|++++++||+||
T Consensus 111 ~~~~~----~~~~~~S~~~l~~isidR 133 (448)
T 2z73_A 111 YGFIG----GIFGFMSIMTMAMISIDR 133 (448)
T ss_dssp HHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHH----HHHHHHHHHHHHHHHHHH
Confidence 99888 899999999999999998
No 19
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=97.10 E-value=4e-05 Score=45.80 Aligned_cols=27 Identities=15% Similarity=0.323 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHhhhhheehhe-ecC
Q psy2990 60 MYGYVMPFLLLITIIANTLIVVVL-SKR 86 (162)
Q Consensus 60 ~~~~~~~~i~~~gi~gN~~vl~v~-~~~ 86 (162)
+..++|.+++++|++||++++|++ ++|
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~ 57 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKK 57 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEec
Confidence 667799999999999999999874 444
No 20
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=92.80 E-value=0.03 Score=27.81 Aligned_cols=13 Identities=31% Similarity=0.353 Sum_probs=12.1
Q ss_pred HHHHHHhhhhccC
Q psy2990 150 ASIWLTLALAVQR 162 (162)
Q Consensus 150 ~s~~~l~~isidR 162 (162)
+|+++|++||+||
T Consensus 2 ~Si~~L~~is~dR 14 (32)
T 1hll_A 2 SSIVHLCAISLDR 14 (32)
T ss_dssp HHHHHHHHHHTHH
T ss_pred cHHHHHHHHHHHH
Confidence 6899999999998
Done!