Query psy2993
Match_columns 87
No_of_seqs 92 out of 103
Neff 4.1
Searched_HMMs 29240
Date Fri Aug 16 22:45:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2993.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2993hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.0 2.1E-10 7.2E-15 88.1 5.5 57 7-64 63-119 (510)
2 2lnl_A C-X-C chemokine recepto 98.8 1.8E-08 6.2E-13 70.6 6.6 53 7-64 39-91 (296)
3 3pbl_A D(3) dopamine receptor, 98.7 3E-08 1E-12 73.0 7.3 55 7-63 66-120 (481)
4 2rh1_A Beta-2-adrenergic recep 98.7 4.2E-08 1.4E-12 74.6 6.7 54 7-63 68-121 (500)
5 3uon_A Human M2 muscarinic ace 98.6 5.5E-08 1.9E-12 71.1 6.6 54 7-63 51-104 (467)
6 4amj_A Beta-1 adrenergic recep 98.6 5.8E-08 2E-12 66.9 5.3 53 7-62 39-91 (315)
7 3rze_A Histamine H1 receptor, 98.6 6.1E-08 2.1E-12 70.6 5.6 54 7-63 36-89 (452)
8 1u19_A Rhodopsin; G protein-co 98.6 1.3E-07 4.3E-12 66.5 6.9 54 7-63 66-119 (349)
9 4dkl_A MU-type opioid receptor 98.6 1.6E-07 5.6E-12 68.3 7.6 54 7-64 45-98 (464)
10 3vw7_A Proteinase-activated re 98.6 1.2E-07 4.3E-12 69.7 6.9 55 7-64 48-102 (484)
11 2ks9_A Substance-P receptor; w 98.6 1.7E-07 5.8E-12 66.8 7.2 53 7-62 60-112 (364)
12 4eiy_A Adenosine receptor A2A/ 98.5 2.1E-07 7.2E-12 67.6 5.4 52 7-63 59-110 (447)
13 3sn6_R Lysozyme, beta-2 adrene 98.5 2.4E-07 8.4E-12 70.4 5.9 54 7-63 210-263 (514)
14 3v2y_A Sphingosine 1-phosphate 98.4 2.7E-07 9.3E-12 70.7 6.1 52 7-62 91-142 (520)
15 3eml_A Human adenosine A2A rec 98.4 2E-07 6.7E-12 68.3 4.9 51 7-62 49-99 (488)
16 3odu_A C-X-C chemokine recepto 98.4 4.3E-07 1.5E-11 67.1 6.7 54 6-64 75-128 (502)
17 4ea3_A Fusion protein of nocic 98.3 9.9E-07 3.4E-11 65.5 6.5 53 6-62 152-204 (434)
18 2z73_A Rhodopsin; visual pigme 98.2 1.6E-06 5.5E-11 64.1 5.9 52 7-61 62-114 (448)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.04 E-value=2.1e-10 Score=88.05 Aligned_cols=57 Identities=23% Similarity=0.405 Sum_probs=47.2
Q ss_pred CcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCchhHHHHHHHHHhh
Q psy2993 7 LTRNEPSTIAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMNEN 64 (87)
Q Consensus 7 ~~~MrTptN~~L~nmAvaDllv~l~~~P~~i~~~~~g~~~~~~g~~~~Cy~~~~~h~v 64 (87)
.|+|+|++|++|+|||+||++++++.+|+.++.+......|++|. ..|+.+.++..+
T Consensus 63 ~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~-~~C~~~~~~~~~ 119 (510)
T 4grv_A 63 LQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGD-AGCRGYYFLRDA 119 (510)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHH-HHHHHHHHHHHH
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhH-HHHHHHHHHHHH
Confidence 356789999999999999999999999999885555667799986 999999885443
No 2
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=98.75 E-value=1.8e-08 Score=70.56 Aligned_cols=53 Identities=17% Similarity=0.127 Sum_probs=41.1
Q ss_pred CcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCchhHHHHHHHHHhh
Q psy2993 7 LTRNEPSTIAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMNEN 64 (87)
Q Consensus 7 ~~~MrTptN~~L~nmAvaDllv~l~~~P~~i~~~~~g~~~~~~g~~~~Cy~~~~~h~v 64 (87)
.|++|||+|++++|||+||+++++. +|....... ..|..|. ..|+.+.++...
T Consensus 39 ~~~lrt~~n~~i~nLAvaDll~~l~-~p~~~~~~~---~~~~~~~-~~c~~~~~~~~~ 91 (296)
T 2lnl_A 39 SRVGRSVTDVYLLNLALADLLFALT-LPIWAASKV---NGWIFGT-FLCKVVSLLKEV 91 (296)
T ss_dssp CTTCCSTTHHHHHHHHHHHHHHHHH-HHHHHHHHH---SSSCCSS-HHHHHHHHHHHH
T ss_pred ccCCCChHHHHHHHHHHHHHHHHHh-hhHHHhhcc---CCCccch-hHHHHHhhhhhh
Confidence 5789999999999999999999876 565555232 2588886 899998875443
No 3
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=98.72 E-value=3e-08 Score=72.98 Aligned_cols=55 Identities=15% Similarity=0.333 Sum_probs=45.5
Q ss_pred CcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCchhHHHHHHHHHh
Q psy2993 7 LTRNEPSTIAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMNE 63 (87)
Q Consensus 7 ~~~MrTptN~~L~nmAvaDllv~l~~~P~~i~~~~~g~~~~~~g~~~~Cy~~~~~h~ 63 (87)
.+++|+|+|++|+|||+||++++++.+|+.++ ..+.+..|.++. ..|+...++..
T Consensus 66 ~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~-~~~~~~~~~~~~-~~C~~~~~~~~ 120 (481)
T 3pbl_A 66 ERALQTTTNYLVVSLAVADLLVATLVMPWVVY-LEVTGGVWNFSR-ICCDVFVTLDV 120 (481)
T ss_dssp CSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHH-HHHTTSCCCSCH-HHHHHHHHHHH
T ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCccccCc-chhhhHHHHHH
Confidence 47789999999999999999999999999888 433445688886 89999887443
No 4
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=98.66 E-value=4.2e-08 Score=74.56 Aligned_cols=54 Identities=15% Similarity=0.175 Sum_probs=44.5
Q ss_pred CcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCchhHHHHHHHHHh
Q psy2993 7 LTRNEPSTIAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMNE 63 (87)
Q Consensus 7 ~~~MrTptN~~L~nmAvaDllv~l~~~P~~i~~~~~g~~~~~~g~~~~Cy~~~~~h~ 63 (87)
.+++|+|+|++|+|||+||++++++.+|+.+..... ..|.++. ..|+.+.++..
T Consensus 68 ~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~--~~w~~~~-~~C~~~~~~~~ 121 (500)
T 2rh1_A 68 FERLQTVTNYFITSLACADLVMGLAVVPFGAAHILM--KMWTFGN-FWCEFWTSIDV 121 (500)
T ss_dssp CGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH--TSCCSHH-HHHHHHHHHHH
T ss_pred cCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCcCCc-chhhHHHHHHH
Confidence 568999999999999999999999999998874432 3588886 89998877443
No 5
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=98.64 E-value=5.5e-08 Score=71.12 Aligned_cols=54 Identities=19% Similarity=0.324 Sum_probs=44.5
Q ss_pred CcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCchhHHHHHHHHHh
Q psy2993 7 LTRNEPSTIAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMNE 63 (87)
Q Consensus 7 ~~~MrTptN~~L~nmAvaDllv~l~~~P~~i~~~~~g~~~~~~g~~~~Cy~~~~~h~ 63 (87)
.+++|+|+|++|+|||+||++++++.+|..+..... ..|.++. ..|+.+.++..
T Consensus 51 ~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~--~~~~~~~-~~C~~~~~~~~ 104 (467)
T 3uon_A 51 NRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVI--GYWPLGP-VVCDLWLALDY 104 (467)
T ss_dssp CGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHS--SSCCSCH-HHHHHHHHHHH
T ss_pred cCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCccCCc-chHhHHHHHHH
Confidence 467899999999999999999999999998874432 2688886 89999887443
No 6
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=98.60 E-value=5.8e-08 Score=66.86 Aligned_cols=53 Identities=15% Similarity=0.181 Sum_probs=43.7
Q ss_pred CcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCchhHHHHHHHHH
Q psy2993 7 LTRNEPSTIAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMN 62 (87)
Q Consensus 7 ~~~MrTptN~~L~nmAvaDllv~l~~~P~~i~~~~~g~~~~~~g~~~~Cy~~~~~h 62 (87)
+|++|+|+|+++.|||+||++++++.+|..+..... ..|.++. ..|+.+.++.
T Consensus 39 ~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~--~~~~~~~-~~C~~~~~~~ 91 (315)
T 4amj_A 39 TQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVR--GTWLWGS-FLCELWTSLD 91 (315)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH--SSCCSCH-HHHHHHHHHH
T ss_pred chhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhc--CCeeccc-cHHHHHHHHH
Confidence 577899999999999999999999999988874432 2577786 8999987743
No 7
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=98.59 E-value=6.1e-08 Score=70.59 Aligned_cols=54 Identities=11% Similarity=0.138 Sum_probs=44.6
Q ss_pred CcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCchhHHHHHHHHHh
Q psy2993 7 LTRNEPSTIAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMNE 63 (87)
Q Consensus 7 ~~~MrTptN~~L~nmAvaDllv~l~~~P~~i~~~~~g~~~~~~g~~~~Cy~~~~~h~ 63 (87)
.+++|+|+|++|+|||+||++++++.+|..+.... . ..|.++. ..|+.+.++..
T Consensus 36 ~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~-~-~~~~~~~-~~C~~~~~~~~ 89 (452)
T 3rze_A 36 ERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLL-M-SKWSLGR-PLCLFWLSMDY 89 (452)
T ss_dssp CSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHH-S-SSCSSHH-HHHHHHHHHHH
T ss_pred ccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH-c-CCccCCc-hhHhHHHHHHH
Confidence 46789999999999999999999999999988443 2 3678776 89999887443
No 8
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=98.59 E-value=1.3e-07 Score=66.49 Aligned_cols=54 Identities=15% Similarity=0.257 Sum_probs=43.6
Q ss_pred CcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCchhHHHHHHHHHh
Q psy2993 7 LTRNEPSTIAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMNE 63 (87)
Q Consensus 7 ~~~MrTptN~~L~nmAvaDllv~l~~~P~~i~~~~~g~~~~~~g~~~~Cy~~~~~h~ 63 (87)
+|++|+|+|++++|||+||+++++..+|..+..... + .|.++. ..|+...++..
T Consensus 66 ~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~-~-~~~~~~-~~C~~~~~~~~ 119 (349)
T 1u19_A 66 HKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLH-G-YFVFGP-TGCNLEGFFAT 119 (349)
T ss_dssp STTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH-T-SCTTHH-HHHHHHHHHHH
T ss_pred hhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhc-C-eeeCCh-hHHHHHHHHHH
Confidence 578899999999999999999999999998874432 2 477775 89998877443
No 9
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=98.58 E-value=1.6e-07 Score=68.31 Aligned_cols=54 Identities=19% Similarity=0.244 Sum_probs=43.4
Q ss_pred CcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCchhHHHHHHHHHhh
Q psy2993 7 LTRNEPSTIAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMNEN 64 (87)
Q Consensus 7 ~~~MrTptN~~L~nmAvaDllv~l~~~P~~i~~~~~g~~~~~~g~~~~Cy~~~~~h~v 64 (87)
.+++|+|+|++++|||+||+++++. +|..+..+..+ .|.++. ..|+.+.++..+
T Consensus 45 ~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~--~~~~~~-~~C~~~~~~~~~ 98 (464)
T 4dkl_A 45 YTKMKTATNIYIFNLALADALATST-LPFQSVNYLMG--TWPFGN-ILCKIVISIDYY 98 (464)
T ss_dssp CSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHS--SCCSCS-HHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhC--Cccccc-chhhhHHHHHHH
Confidence 4678999999999999999999888 88887744432 588886 899998874433
No 10
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=98.58 E-value=1.2e-07 Score=69.73 Aligned_cols=55 Identities=9% Similarity=0.132 Sum_probs=42.2
Q ss_pred CcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCchhHHHHHHHHHhh
Q psy2993 7 LTRNEPSTIAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMNEN 64 (87)
Q Consensus 7 ~~~MrTptN~~L~nmAvaDllv~l~~~P~~i~~~~~g~~~~~~g~~~~Cy~~~~~h~v 64 (87)
.+++|+|+|++|+|||+||+++++. +|..+.... ....|.++. ..|+.+.++..+
T Consensus 48 ~~~l~~~~~~~l~~La~aDll~~~~-~~~~~~~~~-~~~~~~~~~-~~C~~~~~~~~~ 102 (484)
T 3vw7_A 48 KMKVKKPAVVYMLHLATADVLFVSV-LPFKISYYF-SGSDWQFGS-ELCRFVTAAFYC 102 (484)
T ss_dssp HGGGCCHHHHHHHHHHHHHHHHHTT-HHHHHHHHH-TTSCCCSCH-HHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-hcCCcccch-hHHhHHHHHHHH
Confidence 4678999999999999999999776 565555243 344688886 999998875443
No 11
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=98.57 E-value=1.7e-07 Score=66.78 Aligned_cols=53 Identities=15% Similarity=0.045 Sum_probs=43.2
Q ss_pred CcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCchhHHHHHHHHH
Q psy2993 7 LTRNEPSTIAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMN 62 (87)
Q Consensus 7 ~~~MrTptN~~L~nmAvaDllv~l~~~P~~i~~~~~g~~~~~~g~~~~Cy~~~~~h 62 (87)
+|++|+|+|++++|||+||++++++.+|..+..... ..|.++. ..|+...++.
T Consensus 60 ~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~--~~~~~~~-~~C~~~~~~~ 112 (364)
T 2ks9_A 60 HKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVH--NEWYYGL-FYCKFHNFFP 112 (364)
T ss_dssp CTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH--TSCSSCH-HHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCccchH-HHHHhHHHHH
Confidence 578899999999999999999999999988773332 2577775 8999887743
No 12
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=98.46 E-value=2.1e-07 Score=67.64 Aligned_cols=52 Identities=10% Similarity=0.020 Sum_probs=41.6
Q ss_pred CcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCchhHHHHHHHHHh
Q psy2993 7 LTRNEPSTIAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMNE 63 (87)
Q Consensus 7 ~~~MrTptN~~L~nmAvaDllv~l~~~P~~i~~~~~g~~~~~~g~~~~Cy~~~~~h~ 63 (87)
.+++|+|+|++|+|||+||++++++.+|..+..+ . .|..+. ..|+...++..
T Consensus 59 ~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~-~---~~~~~~-~~C~~~~~~~~ 110 (447)
T 4eiy_A 59 NSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS-T---GFCAAC-HGCLFIACFVL 110 (447)
T ss_dssp CGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH-T---TCEEEH-HHHHHHHHHHH
T ss_pred ccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c---ccccCc-cHHHHHHHHHH
Confidence 5678999999999999999999999999888732 2 455554 78998877543
No 13
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=98.46 E-value=2.4e-07 Score=70.38 Aligned_cols=54 Identities=15% Similarity=0.141 Sum_probs=44.5
Q ss_pred CcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCchhHHHHHHHHHh
Q psy2993 7 LTRNEPSTIAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMNE 63 (87)
Q Consensus 7 ~~~MrTptN~~L~nmAvaDllv~l~~~P~~i~~~~~g~~~~~~g~~~~Cy~~~~~h~ 63 (87)
.+++|+|+|++|+|||+||++++++.+|..+..... ..|.++. ..|+.+.++..
T Consensus 210 ~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~--~~~~~~~-~~C~~~~~l~~ 263 (514)
T 3sn6_R 210 FERLQTVTNYFITSLACADLVMGLAVVPFGAAHILT--KTWTFGN-FWCEFWTSIDV 263 (514)
T ss_dssp CGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH--TSCCSCS-HHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHc--CCeeCCc-chhhhHHHHHH
Confidence 577899999999999999999999999998874432 2578886 89998887443
No 14
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=98.45 E-value=2.7e-07 Score=70.75 Aligned_cols=52 Identities=17% Similarity=0.131 Sum_probs=41.8
Q ss_pred CcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCchhHHHHHHHHH
Q psy2993 7 LTRNEPSTIAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMN 62 (87)
Q Consensus 7 ~~~MrTptN~~L~nmAvaDllv~l~~~P~~i~~~~~g~~~~~~g~~~~Cy~~~~~h 62 (87)
.+++|+|+|++|+|||+||++++++.+|..+.. ....|.++. ..|+...++.
T Consensus 91 ~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~---~~~~~~~~~-~~c~~~~~~~ 142 (520)
T 3v2y_A 91 TKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS---GATTYKLTP-AQWFLREGSM 142 (520)
T ss_dssp CSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS---GGGGTTSCH-HHHHHHHHHH
T ss_pred CccccChHHHHHHHHHHHHHHHHHHHHHHHHHc---cccceeeCc-cccchHHHHH
Confidence 477999999999999999999999999988773 223466775 7888877643
No 15
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=98.44 E-value=2e-07 Score=68.33 Aligned_cols=51 Identities=10% Similarity=0.040 Sum_probs=41.8
Q ss_pred CcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCchhHHHHHHHHH
Q psy2993 7 LTRNEPSTIAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMN 62 (87)
Q Consensus 7 ~~~MrTptN~~L~nmAvaDllv~l~~~P~~i~~~~~g~~~~~~g~~~~Cy~~~~~h 62 (87)
.+++|+|+|++|+|||+||++++++.+|..+. +.. .|..+. ..|+...++.
T Consensus 49 ~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~-~~~---~~~~~~-~~C~~~~~~~ 99 (488)
T 3eml_A 49 NSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT-IST---GFCAAC-HGCLFIACFV 99 (488)
T ss_dssp CGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHH-HTT---CCEECH-HHHHHHHHHH
T ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc---cccccc-hHHHHHHHHH
Confidence 46789999999999999999999999998887 322 466665 7899888744
No 16
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=98.44 E-value=4.3e-07 Score=67.13 Aligned_cols=54 Identities=9% Similarity=0.076 Sum_probs=42.8
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCchhHHHHHHHHHhh
Q psy2993 6 PLTRNEPSTIAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMNEN 64 (87)
Q Consensus 6 ~~~~MrTptN~~L~nmAvaDllv~l~~~P~~i~~~~~g~~~~~~g~~~~Cy~~~~~h~v 64 (87)
..+++|+|+|++|+|||+||+++. +.+|..+.... + .|.++. ..|+.+.++..+
T Consensus 75 ~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~-~--~~~~~~-~~C~~~~~~~~~ 128 (502)
T 3odu_A 75 YQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAV-A--NWYFGN-FLCKAVHVIYTV 128 (502)
T ss_dssp TTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHH-T--CCCSHH-HHHHHHHHHHHH
T ss_pred hcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHh-c--CCcCCc-hhhhhHHHHHHH
Confidence 457889999999999999999995 67898877343 2 588886 789998874433
No 17
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=98.33 E-value=9.9e-07 Score=65.51 Aligned_cols=53 Identities=21% Similarity=0.330 Sum_probs=41.8
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCchhHHHHHHHHH
Q psy2993 6 PLTRNEPSTIAVLMAMALSDMFTLLFPAPWLFYMYTFGNHYKPLSPVAACYAWNIMN 62 (87)
Q Consensus 6 ~~~~MrTptN~~L~nmAvaDllv~l~~~P~~i~~~~~g~~~~~~g~~~~Cy~~~~~h 62 (87)
..+++|+|+|++|+|||+||+++ ++.+|..+.....+ .|.++. ..|+.+.++.
T Consensus 152 ~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~--~~~~~~-~~C~~~~~~~ 204 (434)
T 4ea3_A 152 RHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLG--FWPFGN-ALCKTVIAID 204 (434)
T ss_dssp TTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHT--SCTTHH-HHHHHHHHHH
T ss_pred ecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhc--CCcCcc-cHHHHHHHHH
Confidence 46788999999999999999998 66689887744433 377775 8999887743
No 18
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=98.24 E-value=1.6e-06 Score=64.11 Aligned_cols=52 Identities=15% Similarity=0.182 Sum_probs=41.0
Q ss_pred CcccchhHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHhcCCCCCCchhHHHHHHHH
Q psy2993 7 LTRNEPSTIAVLMAMALSDMFTLLFP-APWLFYMYTFGNHYKPLSPVAACYAWNIM 61 (87)
Q Consensus 7 ~~~MrTptN~~L~nmAvaDllv~l~~-~P~~i~~~~~g~~~~~~g~~~~Cy~~~~~ 61 (87)
+|++|+++|++++|||+||++++++. +|..+..... ..|.++. ..|+...++
T Consensus 62 ~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~--~~~~~~~-~~C~~~~~~ 114 (448)
T 2z73_A 62 TKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFL--KKWIFGF-AACKVYGFI 114 (448)
T ss_dssp CSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHT--TSCCSHH-HHHHHHHHH
T ss_pred ccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhc--CCccCCH-HHHHHHHHH
Confidence 57789999999999999999999875 8887763332 2577775 899988773
Done!