Your job contains 1 sequence.
>psy3003
MEQLQMGIPYITDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTYADDCIVNRVTQ
HKCYIVATCDKDLKRRIRKVPGVPIMYISQHRYTIERMPDAYGAPK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3003
(106 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q32PD0 - symbol:FCF1 "rRNA-processing protein F... 463 6.4e-44 1
UNIPROTKB|Q9Y324 - symbol:FCF1 "rRNA-processing protein F... 463 6.4e-44 1
MGI|MGI:1920986 - symbol:Fcf1 "FCF1 small subunit (SSU) p... 454 5.7e-43 1
ZFIN|ZDB-GENE-050417-67 - symbol:fcf1 "FCF1 small subunit... 452 9.3e-43 1
FB|FBgn0010520 - symbol:Bka "Bekka" species:7227 "Drosoph... 431 1.6e-40 1
TAIR|locus:2062902 - symbol:AT2G46230 "AT2G46230" species... 423 1.1e-39 1
WB|WBGene00009266 - symbol:F30A10.9 species:6239 "Caenorh... 416 6.1e-39 1
DICTYBASE|DDB_G0267606 - symbol:fcf1 "FCF1 family protein... 385 1.2e-35 1
CGD|CAL0003244 - symbol:orf19.3220 species:5476 "Candida ... 375 1.3e-34 1
UNIPROTKB|Q59MK3 - symbol:CaO19.10731 "Potential essentia... 375 1.3e-34 1
POMBASE|SPBC32H8.04c - symbol:SPBC32H8.04c "rRNA processi... 357 1.1e-32 1
ASPGD|ASPL0000002973 - symbol:AN10865 species:162425 "Eme... 355 1.8e-32 1
SGD|S000002747 - symbol:FCF1 "Putative PINc domain nuclea... 352 3.7e-32 1
TAIR|locus:2197885 - symbol:AT1G26530 "AT1G26530" species... 324 3.4e-29 1
UNIPROTKB|G4MWW4 - symbol:MGG_08302 "rRNA-processing prot... 300 1.2e-26 1
POMBASE|SPCC18.12c - symbol:utp23 "rRNA processing protei... 125 1.1e-07 1
UNIPROTKB|Q9BRU9 - symbol:UTP23 "rRNA-processing protein ... 119 4.7e-07 1
CGD|CAL0001138 - symbol:orf19.3724 species:5476 "Candida ... 119 5.8e-07 1
UNIPROTKB|Q59V16 - symbol:CaO19.3724 "Putative uncharacte... 119 5.8e-07 1
FB|FBgn0031361 - symbol:CG17652 species:7227 "Drosophila ... 118 5.8e-07 1
MGI|MGI:1925831 - symbol:Utp23 "UTP23, small subunit (SSU... 117 8.0e-07 1
UNIPROTKB|Q08DU1 - symbol:UTP23 "rRNA-processing protein ... 115 1.3e-06 1
ZFIN|ZDB-GENE-050417-353 - symbol:utp23 "UTP23, small sub... 112 3.1e-06 1
SGD|S000005530 - symbol:UTP23 "Component of the small sub... 96 0.00018 1
>UNIPROTKB|Q32PD0 [details] [associations]
symbol:FCF1 "rRNA-processing protein FCF1 homolog"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] InterPro:IPR006596
GO:GO:0005730 GO:GO:0006364 SMART:SM00670 EMBL:BC108165
IPI:IPI00692748 RefSeq:NP_001032529.1 UniGene:Bt.7765
ProteinModelPortal:Q32PD0 SMR:Q32PD0 STRING:Q32PD0 PRIDE:Q32PD0
Ensembl:ENSBTAT00000027167 GeneID:508270 KEGG:bta:508270 CTD:51077
eggNOG:COG1412 GeneTree:ENSGT00550000074979 HOGENOM:HOG000183747
HOVERGEN:HBG051022 InParanoid:Q32PD0 KO:K14566 OMA:KKTRKFA
OrthoDB:EOG4V6ZHR BioCyc:CATTLE:508270-MONOMER NextBio:20868438
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900 Uniprot:Q32PD0
Length = 198
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 83/99 (83%), Positives = 90/99 (90%)
Query: 8 IPYITDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTYADDCIVNRVTQHKCYIVA 67
IP ITDCV+ EIEKLGQKY+VALRI KDPRFER+PC HKGTYADDC+V RVTQHKCYIVA
Sbjct: 99 IPCITDCVMAEIEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVQRVTQHKCYIVA 158
Query: 68 TCDKDLKRRIRKVPGVPIMYISQHRYTIERMPDAYGAPK 106
T D+DLKRRIRK+PGVPIMYIS HRY IERMPD YGAP+
Sbjct: 159 TVDRDLKRRIRKIPGVPIMYISNHRYNIERMPDDYGAPR 197
>UNIPROTKB|Q9Y324 [details] [associations]
symbol:FCF1 "rRNA-processing protein FCF1 homolog"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR006596 GO:GO:0005730 GO:GO:0006364 SMART:SM00670
CTD:51077 eggNOG:COG1412 HOGENOM:HOG000183747 HOVERGEN:HBG051022
KO:K14566 OMA:KKTRKFA OrthoDB:EOG4V6ZHR InterPro:IPR006984
PANTHER:PTHR12416 Pfam:PF04900 EMBL:AF132969 EMBL:BX248271
EMBL:AC007956 IPI:IPI00427242 RefSeq:NP_057046.1 UniGene:Hs.579828
UniGene:Hs.711584 ProteinModelPortal:Q9Y324 SMR:Q9Y324
STRING:Q9Y324 PhosphoSite:Q9Y324 DMDM:34582346 PRIDE:Q9Y324
Ensembl:ENST00000341162 GeneID:51077 KEGG:hsa:51077 UCSC:uc001xqf.1
GeneCards:GC14P075179 HGNC:HGNC:20220 HPA:HPA046681
neXtProt:NX_Q9Y324 PharmGKB:PA162388159 InParanoid:Q9Y324
ChiTaRS:FCF1 GenomeRNAi:51077 NextBio:53711 ArrayExpress:Q9Y324
Bgee:Q9Y324 CleanEx:HS_FCF1 Genevestigator:Q9Y324
GermOnline:ENSG00000119616 Uniprot:Q9Y324
Length = 198
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 83/99 (83%), Positives = 90/99 (90%)
Query: 8 IPYITDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTYADDCIVNRVTQHKCYIVA 67
IP ITDCV+ EIEKLGQKY+VALRI KDPRFER+PC HKGTYADDC+V RVTQHKCYIVA
Sbjct: 99 IPCITDCVMAEIEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVQRVTQHKCYIVA 158
Query: 68 TCDKDLKRRIRKVPGVPIMYISQHRYTIERMPDAYGAPK 106
T D+DLKRRIRK+PGVPIMYIS HRY IERMPD YGAP+
Sbjct: 159 TVDRDLKRRIRKIPGVPIMYISNHRYNIERMPDDYGAPR 197
>MGI|MGI:1920986 [details] [associations]
symbol:Fcf1 "FCF1 small subunit (SSU) processome component
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
MGI:MGI:1920986 InterPro:IPR006596 GO:GO:0005730 GO:GO:0006364
SMART:SM00670 CTD:51077 eggNOG:COG1412 GeneTree:ENSGT00550000074979
HOGENOM:HOG000183747 HOVERGEN:HBG051022 KO:K14566 OMA:KKTRKFA
OrthoDB:EOG4V6ZHR InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
EMBL:BC033045 EMBL:BC094619 EMBL:AK003561 IPI:IPI00136015
RefSeq:NP_082908.2 UniGene:Mm.341848 ProteinModelPortal:Q9CTH6
STRING:Q9CTH6 PRIDE:Q9CTH6 Ensembl:ENSMUST00000021669 GeneID:73736
KEGG:mmu:73736 UCSC:uc007ogc.2 InParanoid:Q9CTH6 NextBio:338939
Bgee:Q9CTH6 Genevestigator:Q9CTH6 GermOnline:ENSMUSG00000021243
Uniprot:Q9CTH6
Length = 198
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 80/99 (80%), Positives = 90/99 (90%)
Query: 8 IPYITDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTYADDCIVNRVTQHKCYIVA 67
IP ITDCV+ EIEKLGQK++VALRI KDPRF+R+PC HKGTYADDC+V RVTQHKCYIVA
Sbjct: 99 IPCITDCVMAEIEKLGQKFRVALRIAKDPRFDRLPCTHKGTYADDCLVQRVTQHKCYIVA 158
Query: 68 TCDKDLKRRIRKVPGVPIMYISQHRYTIERMPDAYGAPK 106
T D+DLKRRIRK+PGVPIMY+S HRY IERMPD YGAP+
Sbjct: 159 TVDRDLKRRIRKIPGVPIMYLSNHRYNIERMPDDYGAPR 197
>ZFIN|ZDB-GENE-050417-67 [details] [associations]
symbol:fcf1 "FCF1 small subunit (SSU) processome
component homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR006596 ZFIN:ZDB-GENE-050417-67
SMART:SM00670 CTD:51077 eggNOG:COG1412 HOVERGEN:HBG051022 KO:K14566
OrthoDB:EOG4V6ZHR InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
EMBL:BC092852 IPI:IPI00570293 RefSeq:NP_001017601.1
UniGene:Dr.121141 STRING:Q568H9 GeneID:550264 KEGG:dre:550264
InParanoid:Q568H9 NextBio:20879527 Uniprot:Q568H9
Length = 198
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 79/99 (79%), Positives = 89/99 (89%)
Query: 8 IPYITDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTYADDCIVNRVTQHKCYIVA 67
+P ITDCV+ E+EKLG KY+VALRI KDPRF+R+PC HKGTYADDC+V RVTQHKCYIVA
Sbjct: 99 VPCITDCVMAELEKLGMKYRVALRIAKDPRFDRLPCSHKGTYADDCLVQRVTQHKCYIVA 158
Query: 68 TCDKDLKRRIRKVPGVPIMYISQHRYTIERMPDAYGAPK 106
T D+DLKRRIRK+PGVPIMYIS HRY IERMPD YGAP+
Sbjct: 159 TVDRDLKRRIRKIPGVPIMYISNHRYNIERMPDDYGAPR 197
>FB|FBgn0010520 [details] [associations]
symbol:Bka "Bekka" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=NAS] [GO:0048096 "chromatin-mediated
maintenance of transcription" evidence=NAS] [GO:0048812 "neuron
projection morphogenesis" evidence=IMP] InterPro:IPR006596
EMBL:AE014134 SMART:SM00670 eggNOG:COG1412
GeneTree:ENSGT00550000074979 KO:K14566 OMA:KKTRKFA
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900 EMBL:AY071065
EMBL:AY113414 RefSeq:NP_524867.2 UniGene:Dm.14533 SMR:Q9VL75
STRING:Q9VL75 EnsemblMetazoa:FBtr0079874 GeneID:46032
KEGG:dme:Dmel_CG4539 UCSC:CG4539-RA CTD:46032 FlyBase:FBgn0010520
InParanoid:Q9VL75 OrthoDB:EOG4NZS9F GenomeRNAi:46032 NextBio:838641
Uniprot:Q9VL75
Length = 200
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 75/96 (78%), Positives = 86/96 (89%)
Query: 8 IPYITDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTYADDCIVNRVTQHKCYIVA 67
IPYI+DCV E+EKLG KYK+ALRII DPRFER+PC+HKGTYADDC+V RV QHKCYIVA
Sbjct: 102 IPYISDCVRAELEKLGNKYKLALRIISDPRFERLPCLHKGTYADDCLVERVRQHKCYIVA 161
Query: 68 TCDKDLKRRIRKVPGVPIMYISQHRYTIERMPDAYG 103
T DKDLK RIRK+PGVPIMY++ H+Y IERMP+AYG
Sbjct: 162 TNDKDLKNRIRKIPGVPIMYVAAHKYAIERMPEAYG 197
>TAIR|locus:2062902 [details] [associations]
symbol:AT2G46230 "AT2G46230" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0051604 "protein maturation" evidence=RCA]
InterPro:IPR006596 EMBL:CP002685 GenomeReviews:CT485783_GR
EMBL:AC005397 SMART:SM00670 HOGENOM:HOG000183747 KO:K14566
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900 UniGene:At.28094
UniGene:At.69835 EMBL:AF367351 EMBL:AY058227 IPI:IPI00525050
PIR:C84900 RefSeq:NP_566068.1 ProteinModelPortal:O82346
STRING:O82346 PRIDE:O82346 EnsemblPlants:AT2G46230.1 GeneID:819231
KEGG:ath:AT2G46230 TAIR:At2g46230 InParanoid:O82346 OMA:ANCTPCI
PhylomeDB:O82346 ProtClustDB:CLSN2917342 ArrayExpress:O82346
Genevestigator:O82346 Uniprot:O82346
Length = 196
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 73/100 (73%), Positives = 91/100 (91%)
Query: 9 PYITDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTYADDCIVNRVTQHKCYIVAT 68
P ITDCV+ E+EKLGQKY+VALRI KDP FER+PC+HKGTYADDC+V+RVTQHKC+IVAT
Sbjct: 96 PCITDCVMAELEKLGQKYRVALRIAKDPHFERLPCIHKGTYADDCLVDRVTQHKCFIVAT 155
Query: 69 CDKDLKRRIRKVPGVPIMYISQHRYTIERMPDAY--GAPK 106
CD+DLKRRIRK+PGVPIMY++ +Y+IE++P+A GAP+
Sbjct: 156 CDRDLKRRIRKIPGVPIMYVTNRKYSIEKLPEATLGGAPR 195
>WB|WBGene00009266 [details] [associations]
symbol:F30A10.9 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR006596 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0000003 SMART:SM00670
eggNOG:COG1412 GeneTree:ENSGT00550000074979 HOGENOM:HOG000183747
KO:K14566 OMA:KKTRKFA InterPro:IPR006984 PANTHER:PTHR12416
Pfam:PF04900 EMBL:Z81072 PIR:A87883 PIR:T21571 RefSeq:NP_492523.1
ProteinModelPortal:Q93638 SMR:Q93638 STRING:Q93638 PaxDb:Q93638
EnsemblMetazoa:F30A10.9.1 EnsemblMetazoa:F30A10.9.2 GeneID:172780
KEGG:cel:CELE_F30A10.9 UCSC:F30A10.9 CTD:172780 WormBase:F30A10.9
InParanoid:Q93638 NextBio:876977 Uniprot:Q93638
Length = 196
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 72/98 (73%), Positives = 88/98 (89%)
Query: 8 IPYITDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTYADDCIVNRVTQHKCYIVA 67
I Y TDCVL E+EK+ +++K+AL+++KDPR +R+ C HKGTYADDC+V RVTQHKCYIVA
Sbjct: 98 IVYATDCVLAELEKV-RRFKIALKVLKDPRVQRLKCEHKGTYADDCLVQRVTQHKCYIVA 156
Query: 68 TCDKDLKRRIRKVPGVPIMYISQHRYTIERMPDAYGAP 105
TCD+DLKRRIRK+PGVPIMYI HR++IERMPDAYGAP
Sbjct: 157 TCDRDLKRRIRKIPGVPIMYIVNHRFSIERMPDAYGAP 194
>DICTYBASE|DDB_G0267606 [details] [associations]
symbol:fcf1 "FCF1 family protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] dictyBase:DDB_G0267606 InterPro:IPR006596
GenomeReviews:CM000150_GR GO:GO:0005730 EMBL:AAFI02000003
GO:GO:0006364 SMART:SM00670 eggNOG:COG1412 KO:K14566 OMA:KKTRKFA
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
RefSeq:XP_647159.1 STRING:Q55GM5 EnsemblProtists:DDB0237574
GeneID:8615962 KEGG:ddi:DDB_G0267606 ProtClustDB:CLSZ2431510
Uniprot:Q55GM5
Length = 194
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 65/93 (69%), Positives = 81/93 (87%)
Query: 8 IPYITDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTYADDCIVNRVTQHKCYIVA 67
IPYI+DCV EIE+LG K+KVAL+I KDPRF+R+ C HKGTYADDCI+NR+T H+ +IVA
Sbjct: 99 IPYISDCVAAEIERLGSKFKVALKISKDPRFQRLTCSHKGTYADDCIINRITMHRMFIVA 158
Query: 68 TCDKDLKRRIRKVPGVPIMYISQHRYTIERMPD 100
TCD DL+RRIRK+PGVPI+Y+ +YT+ERMPD
Sbjct: 159 TCDADLRRRIRKIPGVPIVYLKGKKYTVERMPD 191
>CGD|CAL0003244 [details] [associations]
symbol:orf19.3220 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] CGD:CAL0003244
InterPro:IPR006596 SMART:SM00670 eggNOG:COG1412 KO:K14566
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900 EMBL:AACQ01000224
EMBL:AACQ01000223 RefSeq:XP_710959.1 RefSeq:XP_710970.1
ProteinModelPortal:Q59MK3 STRING:Q59MK3 GeneID:3647437
GeneID:3647448 KEGG:cal:CaO19.10731 KEGG:cal:CaO19.3220
Uniprot:Q59MK3
Length = 201
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 64/95 (67%), Positives = 78/95 (82%)
Query: 8 IPYITDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTYADDCIVNRVTQHKCYIVA 67
IP ITDCV+ E+EKLG KY++AL++ KDPR +R+ C H GTYADDC+VNRV QHKCYIVA
Sbjct: 107 IPIITDCVIAELEKLGSKYRIALKLAKDPRIQRLKCSHVGTYADDCLVNRVIQHKCYIVA 166
Query: 68 TCDKDLKRRIRKVPGVPIMYISQHRYTIERMPDAY 102
T D DLKRRIRK+PG+PIM + H Y IER+PD +
Sbjct: 167 TNDADLKRRIRKIPGIPIMSVGGHSYVIERLPDVF 201
>UNIPROTKB|Q59MK3 [details] [associations]
symbol:CaO19.10731 "Potential essential protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] CGD:CAL0003244 InterPro:IPR006596
SMART:SM00670 eggNOG:COG1412 KO:K14566 InterPro:IPR006984
PANTHER:PTHR12416 Pfam:PF04900 EMBL:AACQ01000224 EMBL:AACQ01000223
RefSeq:XP_710959.1 RefSeq:XP_710970.1 ProteinModelPortal:Q59MK3
STRING:Q59MK3 GeneID:3647437 GeneID:3647448 KEGG:cal:CaO19.10731
KEGG:cal:CaO19.3220 Uniprot:Q59MK3
Length = 201
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 64/95 (67%), Positives = 78/95 (82%)
Query: 8 IPYITDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTYADDCIVNRVTQHKCYIVA 67
IP ITDCV+ E+EKLG KY++AL++ KDPR +R+ C H GTYADDC+VNRV QHKCYIVA
Sbjct: 107 IPIITDCVIAELEKLGSKYRIALKLAKDPRIQRLKCSHVGTYADDCLVNRVIQHKCYIVA 166
Query: 68 TCDKDLKRRIRKVPGVPIMYISQHRYTIERMPDAY 102
T D DLKRRIRK+PG+PIM + H Y IER+PD +
Sbjct: 167 TNDADLKRRIRKIPGIPIMSVGGHSYVIERLPDVF 201
>POMBASE|SPBC32H8.04c [details] [associations]
symbol:SPBC32H8.04c "rRNA processing protein Fcf1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0032040 "small-subunit
processome" evidence=ISO] PomBase:SPBC32H8.04c InterPro:IPR006596
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR EMBL:AB004535
GO:GO:0006364 GO:GO:0032040 SMART:SM00670 eggNOG:COG1412
HOGENOM:HOG000183747 KO:K14566 OMA:KKTRKFA InterPro:IPR006984
PANTHER:PTHR12416 Pfam:PF04900 RefSeq:NP_595610.1
ProteinModelPortal:O13610 STRING:O13610 EnsemblFungi:SPBC32H8.04c.1
GeneID:2540218 KEGG:spo:SPBC32H8.04c OrthoDB:EOG44BFBP
NextBio:20801350 Uniprot:O13610
Length = 192
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 61/93 (65%), Positives = 79/93 (84%)
Query: 8 IPYITDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTYADDCIVNRVTQHKCYIVA 67
IP I+DCV+ E+EKLG +Y++ALRI KD RFER+PC HKGTYADDCIV RV QHKCY+VA
Sbjct: 97 IPCISDCVMAELEKLGIRYRIALRIAKDERFERLPCTHKGTYADDCIVQRVMQHKCYLVA 156
Query: 68 TCDKDLKRRIRKVPGVPIMYISQHRYTIERMPD 100
T DK+LK+RIRK+PG+PI+ ++ H+ +ER+ D
Sbjct: 157 TNDKNLKQRIRKIPGIPILSVANHKIRVERLVD 189
>ASPGD|ASPL0000002973 [details] [associations]
symbol:AN10865 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR006596 GO:GO:0005730 EMBL:BN001301 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480 SMART:SM00670
HOGENOM:HOG000183747 OMA:KKTRKFA InterPro:IPR006984
PANTHER:PTHR12416 Pfam:PF04900 EnsemblFungi:CADANIAT00007750
Uniprot:C8V372
Length = 187
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 60/94 (63%), Positives = 81/94 (86%)
Query: 8 IPYITDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTYADDCIVNRVTQHKCYIVA 67
IP TDC + E+EKLG KY++ALR+ KDPR+ER+ C HKGTYADDC+V+RVT+H+ Y+VA
Sbjct: 92 IPTFTDCTIAELEKLGDKYRLALRVAKDPRWERVKCSHKGTYADDCLVDRVTKHRIYLVA 151
Query: 68 TCDKDLKRRIRKVPGVPIMYISQHRYTIERMPDA 101
T DKDL RR+RK+PGVPIM +++ ++TIE++PDA
Sbjct: 152 TNDKDLCRRLRKIPGVPIMKVARGKFTIEKLPDA 185
>SGD|S000002747 [details] [associations]
symbol:FCF1 "Putative PINc domain nuclease" species:4932
"Saccharomyces cerevisiae" [GO:0032040 "small-subunit processome"
evidence=IDA;IPI] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] SGD:S000002747 InterPro:IPR006596
GO:GO:0005730 EMBL:BK006938 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 SMART:SM00670 eggNOG:COG1412
GeneTree:ENSGT00550000074979 HOGENOM:HOG000183747 KO:K14566
OMA:KKTRKFA InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
OrthoDB:EOG44BFBP EMBL:U51032 EMBL:AY557728 PIR:S70104
RefSeq:NP_010626.1 ProteinModelPortal:Q05498 DIP:DIP-6627N
IntAct:Q05498 MINT:MINT-684275 STRING:Q05498 PaxDb:Q05498
PeptideAtlas:Q05498 EnsemblFungi:YDR339C GeneID:851939
KEGG:sce:YDR339C CYGD:YDR339c NextBio:970016 Genevestigator:Q05498
GermOnline:YDR339C Uniprot:Q05498
Length = 189
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 58/94 (61%), Positives = 77/94 (81%)
Query: 9 PYITDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTYADDCIVNRVTQHKCYIVAT 68
P ITDCV+ E+EKLG KY++AL++ +DPR +R+ C HKGTYADDC+V+RV QHKCYIVAT
Sbjct: 96 PLITDCVMAELEKLGPKYRIALKLARDPRIKRLSCSHKGTYADDCLVHRVLQHKCYIVAT 155
Query: 69 CDKDLKRRIRKVPGVPIMYISQHRYTIERMPDAY 102
D LK+RIRK+PG+P+M + H Y IE++PD +
Sbjct: 156 NDAGLKQRIRKIPGIPLMSVGGHAYVIEKLPDVF 189
>TAIR|locus:2197885 [details] [associations]
symbol:AT1G26530 "AT1G26530" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0010014 "meristem
initiation" evidence=RCA] [GO:0010075 "regulation of meristem
growth" evidence=RCA] InterPro:IPR006596 EMBL:CP002684
SMART:SM00670 KO:K14566 InterPro:IPR006984 PANTHER:PTHR12416
Pfam:PF04900 IPI:IPI00529387 RefSeq:NP_173975.4 UniGene:At.51774
EnsemblPlants:AT1G26530.1 GeneID:839193 KEGG:ath:AT1G26530
OMA:FKEREDP Uniprot:F4HP91
Length = 178
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 56/77 (72%), Positives = 71/77 (92%)
Query: 32 IIKDPRFERIPCMHKGTYADDCIVNRVTQHKCYIVATCDKDLKRRIRKVPGVPIMYISQH 91
I KDPRFER+PC+ KGTYADDC+V+RVTQHKC+IVATCD+DLKRRIRK+PGVPIMY++Q
Sbjct: 101 IAKDPRFERLPCVLKGTYADDCLVDRVTQHKCFIVATCDRDLKRRIRKIPGVPIMYVTQR 160
Query: 92 RYTIERMPDAY--GAPK 106
+Y+IE++P+A GAP+
Sbjct: 161 KYSIEKLPEATIGGAPR 177
>UNIPROTKB|G4MWW4 [details] [associations]
symbol:MGG_08302 "rRNA-processing protein FCF1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR006596 GO:GO:0005730 EMBL:CM001232 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480 SMART:SM00670 KO:K14566
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
RefSeq:XP_003715775.1 ProteinModelPortal:G4MWW4
EnsemblFungi:MGG_08302T0 GeneID:2678479 KEGG:mgr:MGG_08302
Uniprot:G4MWW4
Length = 201
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 56/97 (57%), Positives = 75/97 (77%)
Query: 9 PYITDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTYADDCIVNRVTQHKCYIVAT 68
P ITDCV+ E+EKLG KY++ALRI +D R+ER+ C HK YADDC+V+R +++ YIVAT
Sbjct: 107 PIITDCVMAELEKLGPKYRIALRIARDERWERLKCDHK-VYADDCLVDRAVKNRIYIVAT 165
Query: 69 CDKDLKRRIRKVPGVPIMYISQHRYTIERMPDAYGAP 105
D+DLKRRIRK+PGVPI+ + +Y +E +P GAP
Sbjct: 166 NDRDLKRRIRKIPGVPIVTCGRKKYLVEGLP---GAP 199
>POMBASE|SPCC18.12c [details] [associations]
symbol:utp23 "rRNA processing protein Utp23 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=ISO]
PomBase:SPCC18.12c InterPro:IPR006596 GO:GO:0005730 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006364 GO:GO:0032040 SMART:SM00670
eggNOG:COG1412 InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
KO:K14773 OMA:GLVKNPE PIR:T41155 RefSeq:NP_588391.1
ProteinModelPortal:O74862 STRING:O74862 EnsemblFungi:SPCC18.12c.1
GeneID:2539158 KEGG:spo:SPCC18.12c HOGENOM:HOG000212592
OrthoDB:EOG4FXVJ0 NextBio:20800330 Uniprot:O74862
Length = 260
Score = 125 (49.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/95 (32%), Positives = 51/95 (53%)
Query: 9 PYITDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMH--KGTYADDCI-----VNRVTQH 61
P IT C + ++ + K +RI K FER C H + +CI +N +H
Sbjct: 59 PMITQCCIRQLYSKSDELKQEIRIAKS--FERRRCGHIDEALSPSECIQSVVNINGRNKH 116
Query: 62 KCYIVATCDKDLKRRIRKVPGVPIMYISQHRYTIE 96
+ Y+VAT D +L++ +R VPGVP++Y+ + +E
Sbjct: 117 R-YVVATQDPELRQALRSVPGVPLIYMKRSVVILE 150
>UNIPROTKB|Q9BRU9 [details] [associations]
symbol:UTP23 "rRNA-processing protein UTP23 homolog"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] EMBL:CH471060
GO:GO:0005730 GO:GO:0006364 eggNOG:COG1412 InterPro:IPR006984
PANTHER:PTHR12416 Pfam:PF04900 CTD:84294 HOGENOM:HOG000239062
HOVERGEN:HBG054456 KO:K14773 EMBL:AK055279 EMBL:AK315770
EMBL:AC087350 EMBL:AP002905 EMBL:BC005955 EMBL:BC022441
IPI:IPI00031612 IPI:IPI00980310 RefSeq:NP_115710.2 UniGene:Hs.86970
ProteinModelPortal:Q9BRU9 STRING:Q9BRU9 PhosphoSite:Q9BRU9
DMDM:296452859 PRIDE:Q9BRU9 Ensembl:ENST00000309822
Ensembl:ENST00000357148 GeneID:84294 KEGG:hsa:84294 UCSC:uc003yoc.3
GeneCards:GC08P117849 HGNC:HGNC:28224 HPA:HPA044418
neXtProt:NX_Q9BRU9 PharmGKB:PA162408778 InParanoid:Q9BRU9
OMA:GLVKNPE PhylomeDB:Q9BRU9 ChiTaRS:UTP23 GenomeRNAi:84294
NextBio:73940 ArrayExpress:Q9BRU9 Bgee:Q9BRU9 CleanEx:HS_UTP23
Genevestigator:Q9BRU9 Uniprot:Q9BRU9
Length = 249
Score = 119 (46.9 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 28/89 (31%), Positives = 48/89 (53%)
Query: 12 TDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTYADDCIVNRVTQ---HKCYIVAT 68
T CVL E+E LG+ A I + + P +C+++ V + H Y VAT
Sbjct: 62 TRCVLKELETLGKDLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEEGNPHH-YFVAT 120
Query: 69 CDKDLKRRIRKVPGVPIMYISQHRYTIER 97
D++L +++K PGVP+M+I Q+ +++
Sbjct: 121 QDQNLSVKVKKKPGVPLMFIIQNTMVLDK 149
>CGD|CAL0001138 [details] [associations]
symbol:orf19.3724 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] CGD:CAL0001138 eggNOG:COG1412
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900 EMBL:AACQ01000127
RefSeq:XP_713413.1 STRING:Q59V16 GeneID:3644926 KEGG:cal:CaO19.3724
Uniprot:Q59V16
Length = 269
Score = 119 (46.9 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 34/97 (35%), Positives = 53/97 (54%)
Query: 9 PYITDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTY-ADDCI---VNRVTQHKC- 63
P IT C + + K + A+ I K FER C H+ CI VN Q+K
Sbjct: 59 PMITQCCIQAL--YDTKNQPAIDIAKS--FERRKCNHREAIDPSQCIESIVNIKGQNKHR 114
Query: 64 YIVATCDKDLKRRIRKVPGVPIMYISQHRYTIERMPD 100
YIVA+ D L++++RK+PGVP++Y+++ +E + D
Sbjct: 115 YIVASQDLQLRKKLRKIPGVPLIYMNRSVMVMEPISD 151
>UNIPROTKB|Q59V16 [details] [associations]
symbol:CaO19.3724 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] CGD:CAL0001138 eggNOG:COG1412
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900 EMBL:AACQ01000127
RefSeq:XP_713413.1 STRING:Q59V16 GeneID:3644926 KEGG:cal:CaO19.3724
Uniprot:Q59V16
Length = 269
Score = 119 (46.9 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 34/97 (35%), Positives = 53/97 (54%)
Query: 9 PYITDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTY-ADDCI---VNRVTQHKC- 63
P IT C + + K + A+ I K FER C H+ CI VN Q+K
Sbjct: 59 PMITQCCIQAL--YDTKNQPAIDIAKS--FERRKCNHREAIDPSQCIESIVNIKGQNKHR 114
Query: 64 YIVATCDKDLKRRIRKVPGVPIMYISQHRYTIERMPD 100
YIVA+ D L++++RK+PGVP++Y+++ +E + D
Sbjct: 115 YIVASQDLQLRKKLRKIPGVPLIYMNRSVMVMEPISD 151
>FB|FBgn0031361 [details] [associations]
symbol:CG17652 species:7227 "Drosophila melanogaster"
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] GO:GO:0006911
EMBL:AE014134 InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
KO:K14773 OMA:GLVKNPE GeneTree:ENSGT00550000074848
RefSeq:NP_608617.1 UniGene:Dm.18434 ProteinModelPortal:Q9VQ40
IntAct:Q9VQ40 MINT:MINT-330392 STRING:Q9VQ40 PRIDE:Q9VQ40
EnsemblMetazoa:FBtr0077904 EnsemblMetazoa:FBtr0333543 GeneID:33353
KEGG:dme:Dmel_CG17652 UCSC:CG17652-RA FlyBase:FBgn0031361
InParanoid:Q9VQ40 OrthoDB:EOG4WPZJV PhylomeDB:Q9VQ40
GenomeRNAi:33353 NextBio:783162 ArrayExpress:Q9VQ40 Bgee:Q9VQ40
Uniprot:Q9VQ40
Length = 244
Score = 118 (46.6 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 33/93 (35%), Positives = 52/93 (55%)
Query: 5 QMGIPYIT-DCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKG--TYADDCIVNRVTQH 61
Q G+ +T CV+ E E LG A I+K RF C H+G A +CI + +T+
Sbjct: 54 QCGVKLLTTQCVILESESLGAPLTGATSIVK--RFHVHKCGHEGKPVPASECIKS-MTKD 110
Query: 62 KCYIVATCDKDLKRRIRKVPGVPIMYISQHRYT 94
Y+VA+ D+ L+ +RK+PG ++Y+ H+ T
Sbjct: 111 NRYVVASQDRLLQESLRKIPGRCLLYL--HKAT 141
>MGI|MGI:1925831 [details] [associations]
symbol:Utp23 "UTP23, small subunit (SSU) processome
component, homolog (yeast)" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0042254 "ribosome
biogenesis" evidence=IEA] MGI:MGI:1925831 GO:GO:0005730
GO:GO:0006364 eggNOG:COG1412 InterPro:IPR006984 PANTHER:PTHR12416
Pfam:PF04900 CTD:84294 HOVERGEN:HBG054456 KO:K14773 OMA:GLVKNPE
EMBL:AK021306 EMBL:AK042518 EMBL:AK134445 EMBL:BC046791
EMBL:BC056961 IPI:IPI00459626 RefSeq:NP_084408.1 UniGene:Mm.176347
ProteinModelPortal:Q9CX11 STRING:Q9CX11 PhosphoSite:Q9CX11
PaxDb:Q9CX11 PRIDE:Q9CX11 Ensembl:ENSMUST00000137116 GeneID:78581
KEGG:mmu:78581 UCSC:uc007vrc.2 GeneTree:ENSGT00550000074848
HOGENOM:HOG000185771 InParanoid:Q9CX11 NextBio:349135 Bgee:Q9CX11
Genevestigator:Q9CX11 Uniprot:Q9CX11
Length = 249
Score = 117 (46.2 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 26/89 (29%), Positives = 49/89 (55%)
Query: 12 TDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTYADDCIVNRVTQ---HKCYIVAT 68
T CVL E+E LG++ A I + + P +C+++ V + H Y VAT
Sbjct: 62 TRCVLKELETLGKELYGAKLIAQKCQVRNCPHFKSPVSGSECLLSMVDEGNPHH-YFVAT 120
Query: 69 CDKDLKRRIRKVPGVPIMYISQHRYTIER 97
D++L ++++ PG+P+M+I Q+ +++
Sbjct: 121 QDQNLSVKVKRTPGIPLMFIIQNTIVLDK 149
>UNIPROTKB|Q08DU1 [details] [associations]
symbol:UTP23 "rRNA-processing protein UTP23 homolog"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] GO:GO:0005730
BRENDA:3.1.1.77 GO:GO:0006364 eggNOG:COG1412 InterPro:IPR006984
PANTHER:PTHR12416 Pfam:PF04900 EMBL:BC123565 IPI:IPI00695224
RefSeq:NP_001069507.1 RefSeq:XP_001249520.1 UniGene:Bt.88040
ProteinModelPortal:Q08DU1 STRING:Q08DU1 PRIDE:Q08DU1 GeneID:534858
GeneID:781182 KEGG:bta:534858 KEGG:bta:781182 CTD:84294
HOGENOM:HOG000239062 HOVERGEN:HBG054456 InParanoid:Q08DU1 KO:K14773
OrthoDB:EOG41G35D NextBio:20876552 Uniprot:Q08DU1
Length = 248
Score = 115 (45.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 26/89 (29%), Positives = 47/89 (52%)
Query: 12 TDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTYADDCIVNRVTQ---HKCYIVAT 68
T CVL E+E LG+ A I + + P +C+++ V H Y +AT
Sbjct: 62 TRCVLKELETLGKDLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEDGNPHH-YFLAT 120
Query: 69 CDKDLKRRIRKVPGVPIMYISQHRYTIER 97
D++L +++K PG+P+M+I Q+ +++
Sbjct: 121 QDQNLSMKVKKKPGIPLMFIIQNTIVLDK 149
>ZFIN|ZDB-GENE-050417-353 [details] [associations]
symbol:utp23 "UTP23, small subunit (SSU) processome
component, homolog (yeast)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
ZFIN:ZDB-GENE-050417-353 eggNOG:COG1412 InterPro:IPR006984
PANTHER:PTHR12416 Pfam:PF04900 EMBL:CR855331 HOGENOM:HOG000239062
HOVERGEN:HBG054456 OrthoDB:EOG41G35D OMA:GLVKNPE
GeneTree:ENSGT00550000074848 IPI:IPI00803616 UniGene:Dr.78006
Ensembl:ENSDART00000031524 Uniprot:B8JIZ4
Length = 257
Score = 112 (44.5 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 28/90 (31%), Positives = 50/90 (55%)
Query: 12 TDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMH-KGTY-ADDCIVNRV--TQHKCYIVA 67
T+C L E+E L + A I++ RF+ C H K A +C+++ + T Y +A
Sbjct: 62 TNCALKELESLAKDLYGAKLILQ--RFQIRKCKHMKDPVPASECLLSMLAETNPHHYFIA 119
Query: 68 TCDKDLKRRIRKVPGVPIMYISQHRYTIER 97
T D+ L ++K+PGVP++YI + +++
Sbjct: 120 TQDQQLTTALKKIPGVPLLYIILNTMVLDK 149
>SGD|S000005530 [details] [associations]
symbol:UTP23 "Component of the small subunit processome,
involved in 40S ribosomal" species:4932 "Saccharomyces cerevisiae"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0032040 "small-subunit processome"
evidence=IDA;IPI] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0006364 "rRNA processing" evidence=IEA] SGD:S000005530
GO:GO:0005739 GO:GO:0005730 EMBL:BK006948 GO:GO:0003723 EMBL:U43491
GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
eggNOG:COG1412 InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
KO:K14773 OMA:GLVKNPE GeneTree:ENSGT00550000074848
HOGENOM:HOG000212592 OrthoDB:EOG4FXVJ0 EMBL:Z74912 PIR:S61987
RefSeq:NP_014646.1 ProteinModelPortal:Q12339 DIP:DIP-4352N
IntAct:Q12339 MINT:MINT-480103 STRING:Q12339 PaxDb:Q12339
PeptideAtlas:Q12339 EnsemblFungi:YOR004W GeneID:854165
KEGG:sce:YOR004W CYGD:YOR004w NextBio:975947 Genevestigator:Q12339
GermOnline:YOR004W Uniprot:Q12339
Length = 254
Score = 96 (38.9 bits), Expect = 0.00018, P = 0.00018
Identities = 29/101 (28%), Positives = 56/101 (55%)
Query: 11 ITDCVLGEIEKLGQKYKVALRIIKDPRFERIPCMHKGTYAD-----DCI-----VNRVTQ 60
IT C + + + + A+ + K +FER C H ++ D +CI ++ +
Sbjct: 61 ITQCCIQALYET--RNDGAINLAK--QFERRRCNH--SFKDPKSPAECIESVVNISGANK 114
Query: 61 HKCYIVATCDKDLKRRIRKVPGVPIMYISQHRYTIERMPDA 101
H+ Y+VA+ D DL+R++R VPGVP++++++ +E + A
Sbjct: 115 HR-YVVASQDIDLRRKLRTVPGVPLIHLTRSVMVMEPLSTA 154
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.143 0.447 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 106 106 0.00091 102 3 11 22 0.38 30
29 0.39 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 535 (57 KB)
Total size of DFA: 119 KB (2078 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.54u 0.14s 10.68t Elapsed: 00:00:00
Total cpu time: 10.54u 0.14s 10.68t Elapsed: 00:00:00
Start: Thu Aug 15 12:51:23 2013 End: Thu Aug 15 12:51:23 2013