BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3005
(79 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1WCG|A Chain A, Aphid Myrosinase
pdb|1WCG|B Chain B, Aphid Myrosinase
Length = 464
Score = 74.7 bits (182), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 16 DQVKLWITINEPLEAMQGYDFKTYAPYLSMTGVGGEYLAAHNMLRSHAKAYRLYEKKYKP 75
D+VK WIT NEP+ +GY K YAP L++ G YLA H L +H KAYRLYE+ +KP
Sbjct: 157 DRVKWWITFNEPIAVCKGYSIKAYAPNLNLKTTG-HYLAGHTQLIAHGKAYRLYEEMFKP 215
Query: 76 SQKG 79
+Q G
Sbjct: 216 TQNG 219
>pdb|3AHZ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Tris
pdb|3VIF|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Gluconolactone
pdb|3VIG|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With 1-Deoxynojirimycin
pdb|3VIH|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glycerol
pdb|3VII|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Bis-Tris
Length = 487
Score = 63.2 bits (152), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 16 DQVKLWITINEPLEAMQGYDFKT-YAPYLSMTGVGGEYLAAHNMLRSHAKAYRLYEKKYK 74
D+VKLW+T NEPL M GY + AP ++ G+G +YLAAH ++ +HA+ Y LY+++++
Sbjct: 164 DRVKLWLTFNEPLTFMDGYASEIGMAPSINTPGIG-DYLAAHTVIHAHARIYHLYDQEFR 222
Query: 75 PSQKG 79
Q G
Sbjct: 223 AEQGG 227
>pdb|3AI0|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With
Para-Nitrophenyl-Beta-D-Glucopyranoside
pdb|3VIM|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIN|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIO|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIP|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
Length = 487
Score = 62.0 bits (149), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 16 DQVKLWITINEPLEAMQGYDFKT-YAPYLSMTGVGGEYLAAHNMLRSHAKAYRLYEKKYK 74
D+VKLW+T N+PL M GY + AP ++ G+G +YLAAH ++ +HA+ Y LY+++++
Sbjct: 164 DRVKLWLTFNDPLTFMDGYASEIGMAPSINTPGIG-DYLAAHTVIHAHARIYHLYDQEFR 222
Query: 75 PSQKG 79
Q G
Sbjct: 223 AEQGG 227
>pdb|3VIK|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Cellobiose
pdb|3VIL|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Salicin
Length = 487
Score = 61.2 bits (147), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 16 DQVKLWITINEPLEAMQGYDFKT-YAPYLSMTGVGGEYLAAHNMLRSHAKAYRLYEKKYK 74
D+VKLW+T N PL M GY + AP ++ G+G +YLAAH ++ +HA+ Y LY+++++
Sbjct: 164 DRVKLWLTFNSPLTFMDGYASEIGMAPSINTPGIG-DYLAAHTVIHAHARIYHLYDQEFR 222
Query: 75 PSQKG 79
Q G
Sbjct: 223 AEQGG 227
>pdb|3VIJ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glucose
Length = 487
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 16 DQVKLWITINEPLEAMQGYDFKT-YAPYLSMTGVGGEYLAAHNMLRSHAKAYRLYEKKYK 74
D+VKLW+T N PL M GY + AP ++ G+G +YLAAH ++ +HA+ Y LY+++++
Sbjct: 164 DRVKLWLTFNAPLTFMDGYASEIGMAPSINTPGIG-DYLAAHTVIHAHARIYHLYDQEFR 222
Query: 75 PSQKG 79
Q G
Sbjct: 223 AEQGG 227
>pdb|2E9L|A Chain A, Crystal Structure Of Human Cytosolic Neutral
Beta-Glycosylceramidase (Klotho-Related Prote:klrp)
Complex With Glucose And Fatty Acids
pdb|2E9M|A Chain A, Crystal Structure Of Human Cytosolic Neutral Beta-
Glycosylceramidase (Klotho-Related Prote:klrp) Complex
With Galactose And Fatty Acids
Length = 469
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 16 DQVKLWITINEP-LEAMQGYDFKTYAPYLSMTGVGGEYLAAHNMLRSHAKAYRLYEKKYK 74
D+VK WITINE + ++ YD + P + G GG Y AAHN++++HA+++ Y+ ++
Sbjct: 155 DRVKQWITINEANVLSVMSYDLGMFPPGIPHFGTGG-YQAAHNLIKAHARSWHSYDSLFR 213
Query: 75 PSQKG 79
QKG
Sbjct: 214 KKQKG 218
>pdb|2JFE|X Chain X, The Crystal Structure Of Human Cytosolic Beta-Glucosidase
Length = 469
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 16 DQVKLWITINEP-LEAMQGYDFKTYAPYLSMTGVGGEYLAAHNMLRSHAKAYRLYEKKYK 74
D+VK WITINE + ++ YD + P + G GG Y AAHN++++HA+++ Y+ ++
Sbjct: 155 DRVKQWITINEANVLSVMSYDLGMFPPGIPHFGTGG-YQAAHNLIKAHARSWHSYDSLFR 213
Query: 75 PSQKG 79
QKG
Sbjct: 214 KKQKG 218
>pdb|2ZOX|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase
pdb|3VKK|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase-Mannose Complex
Length = 469
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 16 DQVKLWITINEP-LEAMQGYDFKTYAPYLSMTGVGGEYLAAHNMLRSHAKAYRLYEKKYK 74
D+VK WITIN+ + ++ YD + P + G GG Y AAHN++++HA+++ Y+ ++
Sbjct: 155 DRVKQWITINQANVLSVMSYDLGMFPPGIPHFGTGG-YQAAHNLIKAHARSWHSYDSLFR 213
Query: 75 PSQKG 79
QKG
Sbjct: 214 KKQKG 218
>pdb|3GNO|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
pdb|3GNP|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase With
Octyl-Beta- D-Thio-Glucoside
pdb|3GNR|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase With
Covalently Bound 2-deoxy-2-fluoroglucoside To The
Catalytic Nucleophile E396
Length = 488
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 11/75 (14%)
Query: 16 DQVKLWITINEPLE-AMQGYDFKTYAP---------YLSMTGVGGE-YLAAHNMLRSHAK 64
D+VK WIT+NEP A+QGYD AP Y G E Y+ AH+ + +HA
Sbjct: 168 DRVKHWITLNEPHTVAIQGYDAGLQAPGRCSVLLHLYCKAGNSGTEPYVVAHHFILAHAA 227
Query: 65 AYRLYEKKYKPSQKG 79
A +Y KYK +Q G
Sbjct: 228 AASIYRTKYKATQNG 242
>pdb|1OD0|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OD0|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIF|A Chain A, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIF|B Chain B, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIM|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIM|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1W3J|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1W3J|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1UZ1|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|1UZ1|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|2CBU|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBU|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBV|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CBV|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CES|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CES|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CET|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2CET|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2J77|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J77|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J78|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J78|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J79|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J79|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J7B|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7B|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7C|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7C|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7D|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7D|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7E|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7E|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7F|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7F|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7G|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7G|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7H|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J7H|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J75|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2J75|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2JAL|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2JAL|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2VRJ|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2VRJ|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2WBG|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WC3|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC4|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
Length = 468
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 16 DQVKLWITINEP-LEAMQGYDFKTYAPYLSMTGVGGEYLAAHNMLRSHAKAYRLYEKKYK 74
D+VK WIT+NEP + A+ G+ + +AP M + + A HN+LR+HA+A +++ + K
Sbjct: 178 DRVKNWITLNEPWVVAIVGHLYGVHAP--GMRDIYVAFRAVHNLLRAHARAVKVFRETVK 235
Query: 75 PSQKG 79
+ G
Sbjct: 236 DGKIG 240
>pdb|3SCW|A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCW|B Chain B, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 16 DQVKLWITINEP-LEAMQGYDFKTYAP-YLSMTGVGGE-----YLAAHNMLRSHAKAYRL 68
++VK W T NEP + A+ GYD T P + GG Y+ AHN L SHA A
Sbjct: 171 NRVKHWFTFNEPRIVALLGYDQGTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVAR 230
Query: 69 YEKKYKPSQKG 79
Y KY+ +Q+G
Sbjct: 231 YRTKYQAAQQG 241
>pdb|3SCR|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCR|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCS|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCS|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 16 DQVKLWITINEP-LEAMQGYDFKTYAP-YLSMTGVGGE-----YLAAHNMLRSHAKAYRL 68
++VK W T NEP + A+ GYD T P + GG Y+ AHN L SHA A
Sbjct: 171 NRVKHWFTFNEPRIVALLGYDQGTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVAR 230
Query: 69 YEKKYKPSQKG 79
Y KY+ +Q+G
Sbjct: 231 YRTKYQAAQQG 241
>pdb|3SCP|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCP|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCQ|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCQ|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 16 DQVKLWITINEP-LEAMQGYDFKTYAP-YLSMTGVGGE-----YLAAHNMLRSHAKAYRL 68
++VK W T NEP + A+ GYD T P + GG Y+ AHN L SHA A
Sbjct: 171 NRVKHWFTFNEPRIVALLGYDQGTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVAR 230
Query: 69 YEKKYKPSQKG 79
Y KY+ +Q+G
Sbjct: 231 YRTKYQAAQQG 241
>pdb|2RGL|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGL|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
Length = 481
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 16 DQVKLWITINEP-LEAMQGYDFKTYAP-YLSMTGVGGE-----YLAAHNMLRSHAKAYRL 68
++VK W T NEP + A+ GYD T P + GG Y+ AHN L SHA A
Sbjct: 171 NRVKHWFTFNEPRIVALLGYDQGTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVAR 230
Query: 69 YEKKYKPSQKG 79
Y KY+ +Q+G
Sbjct: 231 YRTKYQAAQQG 241
>pdb|3SCN|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCN|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCO|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCO|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCT|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCT|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCU|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
pdb|3SCU|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
Length = 481
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 16 DQVKLWITINEP-LEAMQGYDFKTYAP-YLSMTGVGGE-----YLAAHNMLRSHAKAYRL 68
++VK W T NEP + A+ GYD T P + GG Y+ AHN L SHA A
Sbjct: 171 NRVKHWFTFNEPRIVALLGYDQGTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVAR 230
Query: 69 YEKKYKPSQKG 79
Y KY+ +Q+G
Sbjct: 231 YRTKYQAAQQG 241
>pdb|3SCV|A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCV|B Chain B, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 16 DQVKLWITINEP-LEAMQGYDFKTYAP-YLSMTGVGGE-----YLAAHNMLRSHAKAYRL 68
++VK W T NEP + A+ GYD T P + GG Y+ AHN L SHA A
Sbjct: 171 NRVKHWFTFNEPRIVALLGYDQGTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVAR 230
Query: 69 YEKKYKPSQKG 79
Y KY+ +Q+G
Sbjct: 231 YRTKYQAAQQG 241
>pdb|1CBG|A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase
From White Clover (Trifolium Repens L.), A Family 1
Glycosyl-Hydrolase
Length = 490
Score = 45.4 bits (106), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 11/75 (14%)
Query: 16 DQVKLWITINEPLE-AMQGYDFKTYAP-----YLSMTGVGGE-----YLAAHNMLRSHAK 64
D+VK WIT+NEP +M Y + T+AP +L + GG+ YLAAH L +HA
Sbjct: 173 DRVKHWITLNEPWGVSMNAYAYGTFAPGRCSDWLKLNCTGGDSGREPYLAAHYQLLAHAA 232
Query: 65 AYRLYEKKYKPSQKG 79
A RLY+ KY+ SQ G
Sbjct: 233 AARLYKTKYQASQNG 247
>pdb|3F4V|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F4V|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3AHT|A Chain A, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHT|B Chain B, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHV|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
pdb|3AHV|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
Length = 481
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 16 DQVKLWITINEP-LEAMQGYDFKTYAP-YLSMTGVGGE-----YLAAHNMLRSHAKAYRL 68
++VK W T N+P + A+ GYD T P + GG Y+ AHN L SHA A
Sbjct: 171 NRVKHWFTFNQPRIVALLGYDQGTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVAR 230
Query: 69 YEKKYKPSQKG 79
Y KY+ +Q+G
Sbjct: 231 YRTKYQAAQQG 241
>pdb|3PTK|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTK|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTM|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTM|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTQ|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
pdb|3PTQ|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
Length = 505
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 16 DQVKLWITINEPLE-AMQGYDFKTYAP---------YLSMTGVGGE-YLAAHNMLRSHAK 64
D+VK WIT NEP GY +AP S+ G E Y A H+ L +HA+
Sbjct: 188 DRVKNWITFNEPWTFCSNGYATGLFAPGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAE 247
Query: 65 AYRLYEKKYKPSQKG 79
RLY+ KY+ QKG
Sbjct: 248 TVRLYKAKYQALQKG 262
>pdb|3AHY|A Chain A, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|B Chain B, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|C Chain C, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|D Chain D, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
Length = 473
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 17 QVKLWITINEPL-EAMQGYDFKTYAPYLSMTGVGGEYLAAHNMLRSHAKAYRLYEKKYKP 75
+V+ WIT NEPL A+ GY T+AP T + HN+L +H +A + Y +KP
Sbjct: 163 KVRNWITFNEPLCSAIPGYGSGTFAPGRQSTS--EPWTVGHNILVAHGRAVKAYRDDFKP 220
Query: 76 S 76
+
Sbjct: 221 A 221
>pdb|4GXP|A Chain A, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|B Chain B, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|C Chain C, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
Length = 467
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 16 DQVKLWITINEPL-EAMQGYDFKTYAPYLSMTGVGGEYLAAHNMLRSHAKAYRLYEKKYK 74
D+VK WIT NEPL A+ GY T+AP T + HN+L +H +A +++ + K
Sbjct: 163 DRVKNWITFNEPLCSAIPGYGSGTFAPGRQST--SEPWTVGHNILVAHGRAVKVFRETVK 220
Query: 75 PSQKG 79
+ G
Sbjct: 221 DGKIG 225
>pdb|2JF6|A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF6|B Chain B, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF7|A Chain A, Structure Of Strictosidine Glucosidase
pdb|2JF7|B Chain B, Structure Of Strictosidine Glucosidase
Length = 532
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 16 DQVKLWITINEPLE-AMQGYDFKTYAPYLSMTGVGGE-----YLAAHNMLRSHAKAYRLY 69
D++K W T NEP A+ GY +AP G G+ Y+ HN+L +H A Y
Sbjct: 197 DKIKYWTTFNEPHTFAVNGYALGEFAPGRGGKGDEGDPAIEPYVVTHNILLAHKAAVEEY 256
Query: 70 EKKYKPSQKG 79
K++ Q+G
Sbjct: 257 RNKFQKCQEG 266
>pdb|3AHX|A Chain A, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|B Chain B, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|C Chain C, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|D Chain D, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
Length = 453
Score = 42.4 bits (98), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 16 DQVKLWITINEP-LEAMQGYDFKTYAPYLSMTGVGGEYLAAHNMLRSHAKAYRLYEKKYK 74
D+VK WIT NEP + + GY +AP + + LAAHN+L SH KA + Y + +
Sbjct: 156 DRVKTWITHNEPWVASYLGYALGVHAP--GIKDMKMALLAAHNILLSHFKAVKAYRELEQ 213
Query: 75 PSQKG 79
Q G
Sbjct: 214 DGQIG 218
>pdb|3CMJ|A Chain A, Crystal Structure Of Engineered Beta-Glucosidase From Soil
Metagenome
Length = 465
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 11 VSCRPDQVKLWITINEPLEAM-QGYDFKTYAPYLSMTGVGGEYLAAHNMLRSHAKAYRLY 69
V+ DQ+ LW+T NEP+ + GY +AP L +GG AH++L SH +A + +
Sbjct: 171 VAALGDQIPLWVTHNEPMVTVWAGYHMGLFAPGLKDPTLGGR--VAHHLLLSHGQALQAF 228
>pdb|1E1E|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1E|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1F|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
pdb|1E1F|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
Length = 512
Score = 40.0 bits (92), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 13/71 (18%)
Query: 16 DQVKLWITINEPLEAMQGYDFKT--YAP----------YLSMTGVGGEYLAAHNMLRSHA 63
D+VK W+T NEP + + + T +AP Y + + Y A HN+L +HA
Sbjct: 181 DKVKNWLTFNEP-QTFTSFSYGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHA 239
Query: 64 KAYRLYEKKYK 74
+A LY K YK
Sbjct: 240 EAVDLYNKHYK 250
>pdb|1HXJ|A Chain A, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
pdb|1HXJ|B Chain B, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
Length = 507
Score = 40.0 bits (92), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 13/71 (18%)
Query: 16 DQVKLWITINEPLEAMQGYDFKT--YAP----------YLSMTGVGGEYLAAHNMLRSHA 63
D+VK W+T NEP + + + T +AP Y + + Y A HN+L +HA
Sbjct: 176 DKVKNWLTFNEP-QTFTSFSYGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHA 234
Query: 64 KAYRLYEKKYK 74
+A LY K YK
Sbjct: 235 EAVDLYNKHYK 245
>pdb|2E3Z|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E3Z|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E40|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
pdb|2E40|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
Length = 465
Score = 39.7 bits (91), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 16 DQVKLWITINEP-LEAMQGYDFKTYAP-YLSMTGVGGEYLAAHNMLRSHAKAYRLYEKKY 73
D V+ WIT NEP + ++ GY +AP ++S T ++ +H+++ +HA A +LY ++
Sbjct: 163 DLVQNWITFNEPWVISVMGYGNGIFAPGHVSNTE---PWIVSHHIILAHAHAVKLYRDEF 219
Query: 74 KPSQKG 79
K Q G
Sbjct: 220 KEKQGG 225
>pdb|4HZ6|A Chain A, Crystal Structure Of Bglb
pdb|4HZ7|A Chain A, Crystal Structure Of Bglb With Glucose
pdb|4HZ8|A Chain A, Crystal Structure Of Bglb With Natural Substrate
Length = 444
Score = 39.7 bits (91), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 11 VSCRPDQVKLWITINEPLEAM-QGYDFKTYAPYLSMTGVGGEYLAAHNMLRSHAKAYRLY 69
V+ DQ+ LW+T NEP+ + GY +AP L +GG AH++L SH +A + +
Sbjct: 150 VAALGDQIPLWVTHNEPMVTVWAGYHMGLFAPGLKDPTLGGR--VAHHLLLSHGQALQAF 207
>pdb|1E4L|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4L|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4N|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E4N|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E55|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E55|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E56|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1E56|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1V08|A Chain A, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
pdb|1V08|B Chain B, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
Length = 512
Score = 38.5 bits (88), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 13/71 (18%)
Query: 16 DQVKLWITINEPLEAMQGYDFKT--YAP----------YLSMTGVGGEYLAAHNMLRSHA 63
D+VK W+T N+P + + + T +AP Y + + Y A HN+L +HA
Sbjct: 181 DKVKNWLTFNDP-QTFTSFSYGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHA 239
Query: 64 KAYRLYEKKYK 74
+A LY K YK
Sbjct: 240 EAVDLYNKHYK 250
>pdb|1H49|A Chain A, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
pdb|1H49|B Chain B, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
Length = 512
Score = 37.7 bits (86), Expect = 0.001, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 16 DQVKLWITINEPLEAMQ-GYDFKTYAP----------YLSMTGVGGEYLAAHNMLRSHAK 64
D+VK W+T N+P Y +AP Y + + Y A HN+L +HA+
Sbjct: 181 DKVKNWLTFNDPQTFTSVSYGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAE 240
Query: 65 AYRLYEKKYK 74
A LY K YK
Sbjct: 241 AVDLYNKHYK 250
>pdb|1V02|E Chain E, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 34.7 bits (78), Expect = 0.014, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 11/69 (15%)
Query: 17 QVKLWITINEPLEAMQ-GYDFKTYAPYLSMTGVG----------GEYLAAHNMLRSHAKA 65
+VK W+T NEP Y AP GV Y+ AHN+LR+HA+
Sbjct: 231 KVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAET 290
Query: 66 YRLYEKKYK 74
+Y K +K
Sbjct: 291 VDIYNKYHK 299
>pdb|1V02|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|B Chain B, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|C Chain C, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|D Chain D, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|F Chain F, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 34.3 bits (77), Expect = 0.020, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
Query: 18 VKLWITINEPLEAMQ-GYDFKTYAPYLSMTGVG----------GEYLAAHNMLRSHAKAY 66
VK W+T NEP Y AP GV Y+ AHN+LR+HA+
Sbjct: 232 VKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETV 291
Query: 67 RLYEKKYK 74
+Y K +K
Sbjct: 292 DIYNKYHK 299
>pdb|3TA9|A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii
pdb|3TA9|B Chain B, Beta-Glucosidase A From The Halothermophile H. Orenii
Length = 458
Score = 33.5 bits (75), Expect = 0.031, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 18 VKLWITINEP-LEAMQGYDFKTYAPYLSMTGVGGEYLAAHNMLRSHAKAYRLYEKKYKPS 76
V LW+T NEP + A +G+ F +AP AH++L SH A ++ ++ P
Sbjct: 165 VDLWVTHNEPWVVAFEGHAFGNHAP--GTKDFKTALQVAHHLLLSHGMAVDIFREEDLPG 222
Query: 77 QKG 79
+ G
Sbjct: 223 EIG 225
>pdb|1VFF|A Chain A, Beta-Glycosidase From Pyrococcus Horikoshii
Length = 423
Score = 33.5 bits (75), Expect = 0.032, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 16 DQVKLWITINEPL-EAMQGYDFKTYAPYLSMTGVGGEYLAAHNMLRSHAKAYRLYEKKYK 74
++VKL T NEP+ M GY + P++ + A N+L++HA AY L K+K
Sbjct: 145 EKVKLVATFNEPMVYVMMGYLTAYWPPFIRSPFKA--FKVAANLLKAHAIAYELLHGKFK 202
>pdb|1V03|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 32.7 bits (73), Expect = 0.052, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
Query: 18 VKLWITINEPLEAMQ-GYDFKTYAPYLSMTGVG----------GEYLAAHNMLRSHAKAY 66
VK W+T N+P Y AP GV Y+ AHN+LR+HA+
Sbjct: 232 VKNWLTFNDPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETV 291
Query: 67 RLYEKKYK 74
+Y K +K
Sbjct: 292 DIYNKYHK 299
>pdb|1MYR|A Chain A, Myrosinase From Sinapis Alba
Length = 501
Score = 32.0 bits (71), Expect = 0.095, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 11/69 (15%)
Query: 16 DQVKLWITINEPLEA-MQGYDFKTYAPYLSMTGVGGE----------YLAAHNMLRSHAK 64
D VK W+TIN+ +GY AP V Y+ AH+ L +HAK
Sbjct: 177 DSVKYWLTINQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAK 236
Query: 65 AYRLYEKKY 73
LY K Y
Sbjct: 237 VVDLYRKNY 245
>pdb|1E6Q|M Chain M, Myrosinase From Sinapis Alba With The Bound Transition
State Analogue Gluco-Tetrazole
pdb|1E6X|M Chain M, Myrosinase From Sinapis Alba With A Bound Transition State
Analogue,D-Glucono-1,5-Lactone
pdb|1E70|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba
pdb|1E71|M Chain M, Myrosinase From Sinapis Alba With Bound Ascorbate
pdb|1E72|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate Or Ascorbate
pdb|1E73|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba With Bound
L-Ascorbate
pdb|1E6S|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate
pdb|1E4M|M Chain M, Myrosinase From Sinapis Alba
pdb|1W9B|M Chain M, S. Alba Myrosinase In Complex With Carba-Glucotropaeolin
pdb|1W9D|M Chain M, S. Alba Myrosinase In Complex With S-Ethyl
Phenylacetothiohydroximate-O-Sulfate
pdb|2WXD|M Chain M, A Micromolar O-Sulfated Thiohydroximate Inhibitor Bound To
Plant Myrosinase
Length = 501
Score = 31.6 bits (70), Expect = 0.10, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 11/69 (15%)
Query: 16 DQVKLWITINEPLEA-MQGYDFKTYAPYLSMTGVGGE----------YLAAHNMLRSHAK 64
D VK W+TIN+ +GY AP V Y+ AH+ L +HAK
Sbjct: 177 DSVKYWLTINQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAK 236
Query: 65 AYRLYEKKY 73
LY K Y
Sbjct: 237 VVDLYRKNY 245
>pdb|1DWA|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 1:
Structure Prior To Irradiation
pdb|1DWF|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 2:
Structure After Irradiation With 9.110e15 PhotonsMM2
pdb|1DWG|M Chain M, Study On Radiation Damage On A Cryocooled Crystal: Part 3
Structure After Irradiation With 18.210e15 PhotonsMM2.
pdb|1DWH|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 4:
Structure After Irradiation With 27.210e15 PhotonsMM2
pdb|1DWI|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 5:
Structure After Irradiation With 54.010e15 PhotonsMM2
pdb|1DWJ|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Refined
Part 6: Structure After A Radiation Dose Of 5410e15
PhotonsMM2
Length = 499
Score = 31.6 bits (70), Expect = 0.11, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 11/69 (15%)
Query: 16 DQVKLWITINEPLEA-MQGYDFKTYAPYLSMTGVGGE----------YLAAHNMLRSHAK 64
D VK W+TIN+ +GY AP V Y+ AH+ L +HAK
Sbjct: 175 DSVKYWLTINQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAK 234
Query: 65 AYRLYEKKY 73
LY K Y
Sbjct: 235 VVDLYRKNY 243
>pdb|2DGA|A Chain A, Crystal Structure Of Hexameric Beta-Glucosidase In Wheat
pdb|3AIQ|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With An Aglycone Dimboa
pdb|3AIR|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With 2-Deoxy- 2-Fluoroglucoside And Dinitrophenol
Length = 565
Score = 30.4 bits (67), Expect = 0.25, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 11/69 (15%)
Query: 16 DQVKLWITINEP-LEAMQGYDFKTYAPYLSMTGVG----------GEYLAAHNMLRSHAK 64
D+VK W T NEP Y +AP G+ Y A H++L +HA+
Sbjct: 226 DRVKNWFTFNEPHTYCCFSYGEGIHAPGRCSPGMDCAVPEGDSLREPYTAGHHILLAHAE 285
Query: 65 AYRLYEKKY 73
A +L++ +Y
Sbjct: 286 AVQLFKARY 294
>pdb|4A3Y|A Chain A, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
pdb|4A3Y|B Chain B, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
Length = 540
Score = 29.3 bits (64), Expect = 0.62, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 16 DQVKLWITINEPLE-AMQGYDFKTYAP 41
D+VK W+T+NEP ++ GY YAP
Sbjct: 176 DRVKHWMTLNEPWTFSVHGYATGLYAP 202
>pdb|4ATD|A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATD|B Chain B, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATL|A Chain A, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
pdb|4ATL|B Chain B, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
Length = 513
Score = 29.3 bits (64), Expect = 0.63, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 16 DQVKLWITINEPLE-AMQGYDFKTYAP 41
D+VK W+T+NEP ++ GY YAP
Sbjct: 176 DRVKHWMTLNEPWTFSVHGYATGLYAP 202
>pdb|1QVB|A Chain A, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
pdb|1QVB|B Chain B, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
Length = 481
Score = 29.3 bits (64), Expect = 0.65, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 7/51 (13%)
Query: 20 LWITINEP-LEAMQGYDFKT--YAP-YLSMTGVGGEYLAAHNMLRSHAKAY 66
+W T+NEP + QGY F + P YLS+ A NM+++HA+AY
Sbjct: 202 MWSTMNEPNVVYEQGYMFVKGGFPPGYLSLEAADK---ARRNMIQAHARAY 249
>pdb|3AIU|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye
pdb|3AIV|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With An Aglycone Dimboa
pdb|3AIW|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With 2-Deoxy-2- Fluoroglucoside And Dinitrophenol
Length = 564
Score = 28.9 bits (63), Expect = 0.84, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 11/69 (15%)
Query: 16 DQVKLWITINEP-LEAMQGYDFKTYAPYLSMTGVG----------GEYLAAHNMLRSHAK 64
D+VK W T NEP Y +AP G+ Y A H++L +HA+
Sbjct: 226 DRVKNWFTFNEPHTYCCFSYGEGIHAPGRCSPGLDCAVPEGDSLREPYTAGHHILLAHAE 285
Query: 65 AYRLYEKKY 73
A L++ Y
Sbjct: 286 AVELFKAHY 294
>pdb|2PBG|A Chain A, 6-Phospho-Beta-D-Galactosidase Form-B
Length = 468
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 17 QVKLWITINE--PLEAMQGYDFKTYAPYLSMTGVGGEYLAAHNMLRSHAKAYRLYEKK 72
+V W T NE P+ Q Y + P + + + + HNM+ SHA+A +LY+ K
Sbjct: 151 EVNYWTTFNEIGPIGDGQ-YLVGKFPPGIKYD-LAKVFQSHHNMMVSHARAVKLYKDK 206
>pdb|1PBG|A Chain A, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|1PBG|B Chain B, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|3PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-C
pdb|3PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-C
Length = 468
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 17 QVKLWITINE--PLEAMQGYDFKTYAPYLSMTGVGGEYLAAHNMLRSHAKAYRLYEKK 72
+V W T NE P+ Q Y + P + + + + HNM+ SHA+A +LY+ K
Sbjct: 151 EVNYWTTFNEIGPIGDGQ-YLVGKFPPGIKYD-LAKVFQSHHNMMVSHARAVKLYKDK 206
>pdb|4PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-Cst
pdb|4PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-Cst
Length = 468
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 17 QVKLWITINE--PLEAMQGYDFKTYAPYLSMTGVGGEYLAAHNMLRSHAKAYRLYEKK 72
+V W T NE P+ Q Y + P + + + + HNM+ SHA+A +LY+ K
Sbjct: 151 EVNYWTTFNEIGPIGDGQ-YLVGKFPPGIKYD-LAKVFQSHHNMMVSHARAVKLYKDK 206
>pdb|4DDQ|A Chain A, Structural Plasticity Of The Bacillus Subtilis Gyra
Homodimer
pdb|4DDQ|B Chain B, Structural Plasticity Of The Bacillus Subtilis Gyra
Homodimer
pdb|4DDQ|C Chain C, Structural Plasticity Of The Bacillus Subtilis Gyra
Homodimer
pdb|4DDQ|D Chain D, Structural Plasticity Of The Bacillus Subtilis Gyra
Homodimer
pdb|4DDQ|E Chain E, Structural Plasticity Of The Bacillus Subtilis Gyra
Homodimer
pdb|4DDQ|F Chain F, Structural Plasticity Of The Bacillus Subtilis Gyra
Homodimer
Length = 502
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 1 MGQPVRCAHQVSCRPDQVKLWITINEPLEAMQGYDFKTYAPYLSMTGVGGEYLAAHNMLR 60
+G+ + VS PD ITI E +E + G DF T L +G+ Y + +
Sbjct: 188 LGEIIDGVLAVSENPD-----ITIPELMEVIPGPDFPTAGQILGRSGIRKAYESGRGSIT 242
Query: 61 SHAKA 65
AKA
Sbjct: 243 IRAKA 247
>pdb|3AIS|A Chain A, Crystal Structure Of A Mutant Beta-Glucosidase In Wheat
Complexed With Dimboa-Glc
Length = 565
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 11/69 (15%)
Query: 16 DQVKLWITINEP-LEAMQGYDFKTYAPYLSMTGVG----------GEYLAAHNMLRSHAK 64
D+VK W T N P Y +AP G+ Y A H++L +HA+
Sbjct: 226 DRVKNWFTFNAPHTYCCFSYGEGIHAPGRCSPGMDCAVPEGDSLREPYTAGHHILLAHAE 285
Query: 65 AYRLYEKKY 73
A +L++ +Y
Sbjct: 286 AVQLFKARY 294
>pdb|3U57|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U57|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|4EK7|A Chain A, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
pdb|4EK7|B Chain B, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
Length = 513
Score = 27.7 bits (60), Expect = 1.5, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 16 DQVKLWITINEPLE-AMQGYDFKTYAP 41
D+VK W+T+N+P ++ GY YAP
Sbjct: 176 DRVKHWMTLNQPWTFSVHGYATGLYAP 202
>pdb|1GNX|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GNX|B Chain B, B-Glucosidase From Streptomyces Sp
pdb|1GON|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GON|B Chain B, B-Glucosidase From Streptomyces Sp
Length = 479
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 16 DQVKLWITINEP-LEAMQGYDFKTYAPYLSMTGVGGEYLAAHNMLRSHAKA 65
D+VK W T+NEP A GY +AP T AAH++ H A
Sbjct: 168 DRVKTWTTLNEPWCSAFLGYGSGVHAP--GRTDPVAALRAAHHLNLGHGLA 216
>pdb|2X5S|A Chain A, Crystal Structure Of T. Maritima Gdp-Mannose
Pyrophosphorylase In Apo State.
pdb|2X5S|B Chain B, Crystal Structure Of T. Maritima Gdp-Mannose
Pyrophosphorylase In Apo State.
pdb|2X5Z|A Chain A, Crystal Structure Of T. Maritima Gdp-Mannose
Pyrophosphorylase In Complex With Gdp-Mannose.
pdb|2X5Z|B Chain B, Crystal Structure Of T. Maritima Gdp-Mannose
Pyrophosphorylase In Complex With Gdp-Mannose.
pdb|2X60|A Chain A, Crystal Structure Of T. Maritima Gdp-Mannose
Pyrophosphorylase In Complex With Gtp.
pdb|2X60|B Chain B, Crystal Structure Of T. Maritima Gdp-Mannose
Pyrophosphorylase In Complex With Gtp.
pdb|2X65|A Chain A, Crystal Structure Of T. Maritima Gdp-Mannose
Pyrophosphorylase In Complex With Mannose-1-Phosphate.
pdb|2X65|B Chain B, Crystal Structure Of T. Maritima Gdp-Mannose
Pyrophosphorylase In Complex With Mannose-1-Phosphate
Length = 336
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 15 PDQVKLWITINEPLEAMQGYD 35
PD K W T+ + L+A++ YD
Sbjct: 113 PDTKKFWKTVKKALDALEKYD 133
>pdb|3TAD|C Chain C, Crystal Structure Of The Liprin-AlphaLIPRIN-Beta Complex
pdb|3TAD|D Chain D, Crystal Structure Of The Liprin-AlphaLIPRIN-Beta Complex
Length = 265
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 6 RCAHQVSCRPDQVKLWITINEPLEAMQGYDFKTYAPYLSMTGVGG 50
R + + S P +V+ W T + +E ++ D YAP L +GV G
Sbjct: 163 RPSDENSITPSEVQQW-TNHRVMEWLRSVDLAEYAPNLRGSGVHG 206
>pdb|3KD4|A Chain A, Crystal Structure Of A Putative Protease (Bdi_1141) From
Parabacteroides Distasonis Atcc 8503 At 2.00 A
Resolution
pdb|3KD4|B Chain B, Crystal Structure Of A Putative Protease (Bdi_1141) From
Parabacteroides Distasonis Atcc 8503 At 2.00 A
Resolution
Length = 506
Score = 26.2 bits (56), Expect = 5.4, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 23 TINEPLEAMQGYDFKTYAPYLSMTGVGGEYLAAHNMLRSH 62
T+++ L+ QGY+ KT+A +L T G N++R H
Sbjct: 217 TLDKRLKESQGYESKTFAQFL--TDKSGNEQEKVNIIRDH 254
>pdb|1QOX|A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|B Chain B, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|C Chain C, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|D Chain D, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|E Chain E, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|F Chain F, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|G Chain G, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|H Chain H, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|I Chain I, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|J Chain J, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|K Chain K, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|L Chain L, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|M Chain M, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|N Chain N, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|O Chain O, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|P Chain P, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
Length = 449
Score = 25.8 bits (55), Expect = 7.3, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 11/60 (18%)
Query: 17 QVKLWITINEPLEAMQGYDFKTYAPYLSMTGVGGEYL-----AAHNMLRSHAKAYRLYEK 71
++K WIT NEP + + YL + G + L +H++L +H +A L+ +
Sbjct: 156 KIKQWITFNEP------WCMAFLSNYLGVHAPGNKDLQLAIDVSHHLLVAHGRAVTLFRE 209
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,538,954
Number of Sequences: 62578
Number of extensions: 86863
Number of successful extensions: 253
Number of sequences better than 100.0: 54
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 170
Number of HSP's gapped (non-prelim): 57
length of query: 79
length of database: 14,973,337
effective HSP length: 48
effective length of query: 31
effective length of database: 11,969,593
effective search space: 371057383
effective search space used: 371057383
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)