RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy3012
(272 letters)
>2ije_S Guanine nucleotide-releasing protein; rasgrf1, CDC25 domain, RAS
guanine nucleotide releasing FACT specific nucleotide
exchange factor; 2.20A {Mus musculus}
Length = 240
Score = 239 bits (613), Expect = 9e-80
Identities = 68/198 (34%), Positives = 121/198 (61%), Gaps = 3/198 (1%)
Query: 70 HPVEIARQLTLLEFDYFRSVKPSELVGSVWTKKNKAEYSPNLIKIMKHTTNFTRWLEKII 129
+EIA QLTLL+ F+S+ E G W K K E +P ++K KH + + ++ I
Sbjct: 5 SALEIAEQLTLLDHLVFKSIPYEEFFGQGWMKAEKYERTPYIMKTTKHFNHVSNFIASEI 64
Query: 130 VEAENFDERLAIMTRIIEMMIVLQKLNNFNGVLAVTSAMGSAAVYRLRFTFQALPTRLQK 189
+ E+ R + + + + + + + L+N+N VL +TS++ +A++RL+ T+ + + +
Sbjct: 65 IRNEDISARASAIEKWVAVADICRCLHNYNAVLEITSSINRSAIFRLKKTWLKVSKQTKS 124
Query: 190 VLEDAREL--NGDHFKKYQEKLRNINPPCIPFFGMYLTNILHIEEGNPDFLPDSKLINFT 247
+L+ ++L + FK +E LRN +PPC+P+ GMYLT+++ IEEG P++ D L+NF+
Sbjct: 125 LLDKLQKLVSSDGRFKNLRESLRNCDPPCVPYLGMYLTDLVFIEEGTPNYTED-GLVNFS 183
Query: 248 KRRKVAEIISEIQQYQTQ 265
K R ++ II EI+Q+Q
Sbjct: 184 KMRMISHIIREIRQFQQT 201
>3qxl_A RAS-specific guanine nucleotide-releasing factor; CDC25 domain
homology, guanine-nucleotide exchange factor, S GTPase
RAL subfamily; 2.24A {Homo sapiens}
Length = 271
Score = 238 bits (610), Expect = 6e-79
Identities = 55/205 (26%), Positives = 109/205 (53%), Gaps = 5/205 (2%)
Query: 64 FNILIAHPVEIARQLTLLEFDYFRSVKPSELVGSVWTKKNKAEYSPNLIKIMKHTTNFTR 123
F++L P E A Q+TL++ F++++P EL W+KK K +PN++ + +
Sbjct: 26 FDVLKVTPEEFASQITLMDIPVFKAIQPEELASCGWSKKEKHSLAPNVVAFTRRFNQVSF 85
Query: 124 WLEKIIVEAENFDERLAIMTRIIEMMIVLQKLNNFNGVLAVTSAMGSAAVYRLRFTFQAL 183
W+ + I+ A+ R I++ +++ L +LNN + +++V SA+ SA ++RL T+ L
Sbjct: 86 WVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALL 145
Query: 184 PTRLQKVLEDAREL--NGDHFKKYQEKLRNIN-PPCIPFFGMYLTNILHIEEGNPDFLPD 240
+ + E L D++K+ +E +R++ P IP+ G+YL ++++I+ P
Sbjct: 146 NRKDKTTFEKLDYLMSKEDNYKRTREYIRSLKMVPSIPYLGIYLLDLIYIDSAYPAS--G 203
Query: 241 SKLINFTKRRKVAEIISEIQQYQTQ 265
S + N + ++ I+ I Q
Sbjct: 204 SIMENEQRSNQMNNILRIIADLQVS 228
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease
mutation, guanine-nucleotide releasing factor, signaling
protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Length = 1049
Score = 253 bits (646), Expect = 1e-77
Identities = 149/269 (55%), Positives = 203/269 (75%), Gaps = 6/269 (2%)
Query: 2 ILEKLKSFLLNEISGKSLRKWADIVLNLIQRKEL--DLEKEITFAFNNSPPPIEVHVPIN 59
+L++++ F+ + GK+++KW + + +IQRK++ D F +SPP +E H+
Sbjct: 710 LLQRMEEFI-GTVRGKAMKKWVESITKIIQRKKIARDNGPGHNITFQSSPPTVEWHISRP 768
Query: 60 S-IDEFNILIAHPVEIARQLTLLEFDYFRSVKPSELVGSVWTKKNKAEYSPNLIKIMKHT 118
I+ F++L HP+EIARQLTLLE D +R+V+PSELVGSVWTK++K SPNL+K+++HT
Sbjct: 769 GHIETFDLLTLHPIEIARQLTLLESDLYRAVQPSELVGSVWTKEDKEINSPNLLKMIRHT 828
Query: 119 TNFTRWLEKIIVEAENFDERLAIMTRIIEMMIVLQKLNNFNGVLAVTSAMGSAAVYRLRF 178
TN T W EK IVE EN +ER+A+++RIIE++ V Q+LNNFNGVL V SAM S+ VYRL
Sbjct: 829 TNLTLWFEKCIVETENLEERVAVVSRIIEILQVFQELNNFNGVLEVVSAMNSSPVYRLDH 888
Query: 179 TFQALPTRLQKVLEDARELNGDHFKKYQEKLRNINPPCIPFFGMYLTNILHIEEGNPDFL 238
TF+ +P+R +K+LE+A EL+ DH+KKY KLR+INPPC+PFFG+YLTNIL EEGNP+ L
Sbjct: 889 TFEQIPSRQKKILEEAHELSEDHYKKYLAKLRSINPPCVPFFGIYLTNILKTEEGNPEVL 948
Query: 239 PDS--KLINFTKRRKVAEIISEIQQYQTQ 265
+LINF+KRRKVAEI EIQQYQ Q
Sbjct: 949 KRHGKELINFSKRRKVAEITGEIQQYQNQ 977
>2ii0_A SOS-1, SON of sevenless homolog 1; signaling protein; 2.02A {Homo
sapiens} SCOP: a.117.1.1 PDB: 1xd2_C* 1nvv_S* 1nvu_S*
1nvw_S* 1nvx_S* 1bkd_S
Length = 490
Score = 240 bits (613), Expect = 8e-77
Identities = 138/267 (51%), Positives = 185/267 (69%), Gaps = 3/267 (1%)
Query: 1 MILEKLKSFLLNEISGKSLRKWADIVLNLIQRKELDLEKEITFAFNNSPPPIEVHVPINS 60
+E+ + + K + I+ ++ ITF + + P +
Sbjct: 153 QRMEEFIGTVRGKAMKKWVESITKIIQRKKIARDNGPGHNITFQSSPPTVEWHISRPGHI 212
Query: 61 IDEFNILIAHPVEIARQLTLLEFDYFRSVKPSELVGSVWTKKNKAEYSPNLIKIMKHTTN 120
+ F++L HP+EIARQLTLLE D +R+V+PSELVGSVWTK++K SPNL+K+++HTTN
Sbjct: 213 -ETFDLLTLHPIEIARQLTLLESDLYRAVQPSELVGSVWTKEDKEINSPNLLKMIRHTTN 271
Query: 121 FTRWLEKIIVEAENFDERLAIMTRIIEMMIVLQKLNNFNGVLAVTSAMGSAAVYRLRFTF 180
T W EK IVE EN +ER+A+++RIIE++ V Q+LNNFNGVL V SAM S+ VYRL TF
Sbjct: 272 LTLWFEKCIVETENLEERVAVVSRIIEILQVFQELNNFNGVLEVVSAMNSSPVYRLDHTF 331
Query: 181 QALPTRLQKVLEDARELNGDHFKKYQEKLRNINPPCIPFFGMYLTNILHIEEGNPDFLPD 240
+ +P+R +K+LE+A EL+ DH+KKY KLR+INPPC+PFFG+YLTNIL EEGNP+ L
Sbjct: 332 EQIPSRQKKILEEAHELSEDHYKKYLAKLRSINPPCVPFFGIYLTNILKTEEGNPEVLKR 391
Query: 241 S--KLINFTKRRKVAEIISEIQQYQTQ 265
+LINF+KRRKVAEI EIQQYQ Q
Sbjct: 392 HGKELINFSKRRKVAEITGEIQQYQNQ 418
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4,
CAMP, SP-camps, GEF, gunanine nucleotide exchange
factor, G-protein, GTP-binding, nucleotide-binding; HET:
SP1; 2.20A {Mus musculus}
Length = 694
Score = 229 bits (584), Expect = 1e-70
Identities = 47/223 (21%), Positives = 98/223 (43%), Gaps = 5/223 (2%)
Query: 45 FNNSPPPIEVHVPINSIDEFNILIAHPVEIARQLTLLEFDYFRSVKPSELVGSVWTKKNK 104
F++ P E P + ++A Q+T +++ F V EL+ + + N
Sbjct: 431 FDSLTPLPEQEGPTTG-TVGTFELMSSKDLAYQMTTYDWELFNCVHELELIYHTFGRHNF 489
Query: 105 AEYSPNLIKIMKHTTNFTRWLEKIIVEAENFDERLAIMTRIIEMMIVLQKLNNFNGVLAV 164
+ + NL ++ W+ + +R+ ++ + I++ ++ N N A+
Sbjct: 490 KKTTANLDLFLRRFNEIQFWVVTEVCLCSQLSKRVQLLKKFIKIAAHCKEYKNLNSFFAI 549
Query: 165 TSAMGSAAVYRLRFTFQALPTRLQKVLEDAREL--NGDHFKKYQEKLRNINPPCIPFFGM 222
+ + AV RL T++ LP++ +K + L + + Y+ + PP IPF +
Sbjct: 550 VMGLSNVAVSRLALTWEKLPSKFKKFYAEFESLMDPSRNHRAYRLTAAKLEPPLIPFMPL 609
Query: 223 YLTNILHIEEGNPDFLPDSKLINFTKRRKVAEIISEIQQYQTQ 265
+ ++ EGN F+ L+NF K R +A ++ Y++Q
Sbjct: 610 LIKDMTFTHEGNKTFID--NLVNFEKMRMIANTARTVRYYRSQ 650
>2byv_E RAP guanine nucleotide exchange factor 4; EPAC2, CAMP-GEF2, CAMP,
cyclic nucleotide, regulation, auto-inhibition, CDC25
homology domain; 2.7A {Mus musculus}
Length = 999
Score = 232 bits (593), Expect = 2e-70
Identities = 47/223 (21%), Positives = 98/223 (43%), Gaps = 5/223 (2%)
Query: 45 FNNSPPPIEVHVPINSIDEFNILIAHPVEIARQLTLLEFDYFRSVKPSELVGSVWTKKNK 104
F++ P E P + ++A Q+T +++ F V EL+ + + N
Sbjct: 736 FDSLTPLPEQEGPTTG-TVGTFELMSSKDLAYQMTTYDWELFNCVHELELIYHTFGRHNF 794
Query: 105 AEYSPNLIKIMKHTTNFTRWLEKIIVEAENFDERLAIMTRIIEMMIVLQKLNNFNGVLAV 164
+ + NL ++ W+ + +R+ ++ + I++ ++ N N A+
Sbjct: 795 KKTTANLDLFLRRFNEIQFWVVTEVCLCSQLSKRVQLLKKFIKIAAHCKEYKNLNSFFAI 854
Query: 165 TSAMGSAAVYRLRFTFQALPTRLQKVLEDAREL--NGDHFKKYQEKLRNINPPCIPFFGM 222
+ + AV RL T++ LP++ +K + L + + Y+ + PP IPF +
Sbjct: 855 VMGLSNVAVSRLALTWEKLPSKFKKFYAEFESLMDPSRNHRAYRLTAAKLEPPLIPFMPL 914
Query: 223 YLTNILHIEEGNPDFLPDSKLINFTKRRKVAEIISEIQQYQTQ 265
+ ++ EGN F+ L+NF K R +A ++ Y++Q
Sbjct: 915 LIKDMTFTHEGNKTFI--DNLVNFEKMRMIANTARTVRYYRSQ 955
>3t6a_A Breast cancer anti-estrogen resistance protein 3; CDC25-homology
domain, GTPase exchange factor, signaling Pro; HET: POG;
2.40A {Homo sapiens}
Length = 333
Score = 87.9 bits (217), Expect = 3e-20
Identities = 28/203 (13%), Positives = 66/203 (32%), Gaps = 18/203 (8%)
Query: 66 ILIAHPVEIARQLTLLEFDYFRSVKPSELVGSVWTKKNKAEY------SPNLIKIMKHTT 119
P IA+ + ++ R + SE + + E + I++
Sbjct: 44 FTNNDPKVIAQHVLSMDCRVARILGVSEEMRRNMGVSSGLELITLPHGHQLRLDIIERHN 103
Query: 120 NFTRWL-EKIIVEAENFDERLAIMTRIIEMMIVL-QKLNNFNGVLAVTSAMGSAAVYRLR 177
+ I+ ++R A +++II++ + L + + A+ A+ + RL
Sbjct: 104 TMAIGIAVDILGCTGTLEDRAATLSKIIQVAVELKDSMGDLYSFSALMKALEMPQITRLE 163
Query: 178 FTFQALPTRLQKVLED----ARELNGDHFKKYQEKLRNINPPCIPFFGMYLTNILHIEEG 233
T+ AL + + + + + + N +P +T + E
Sbjct: 164 KTWTALRHQYTQTAILYEKQLKPFSKLLHEGRESTCVPPNNVSVPLLMPLVT----LMER 219
Query: 234 NPDFLPDSKLINFTKRRKVAEII 256
+ K + EI+
Sbjct: 220 QAVTFEG--TDMWEKNDQSCEIM 240
>3t6g_A SH2 domain-containing protein 3C; CDC25-homology domain, GTPase
exchange factor, focal-adhesio targeting domain,
signaling protein; 2.50A {Homo sapiens}
Length = 331
Score = 78.3 bits (192), Expect = 6e-17
Identities = 34/223 (15%), Positives = 71/223 (31%), Gaps = 15/223 (6%)
Query: 65 NILIAHPVEIARQLTLLEFDYFRSVKPSELVGSVWTKKNKAE--YSPNLIKIMKHTTNFT 122
+ +AR +T ++ R + ++ + ++ + E P+ ++
Sbjct: 44 LLAEVDARTLARHVTKVDCLVARILGVTKEMQTLMGVRWGMELLTLPHGRQLRLDLLERF 103
Query: 123 RWL-----EKIIVEAENFDERLAIMTRIIEMMIVL-QKLNNFNGVLAVTSAMGSAAVYRL 176
+ I+ + +ER A++ + I++ L + N AV A+ A + RL
Sbjct: 104 HTMSIMLAVDILGSTGSAEERAALLHKTIQLAAELRGTMGNMFSFAAVMGALDMAQISRL 163
Query: 177 RFTFQALP---TRLQKVLEDARE--LNGDHFKKYQEKLRNINPPCIPFFGMYLTNILHIE 231
T+ L T + E + L + K L N P + L +
Sbjct: 164 EQTWVTLRQRHTEGAILYEKKLKPFLKSLNEGKEGPPLSNTTFPHVLPLITLLESDSAPP 223
Query: 232 EGNPDFLPD--SKLINFTKRRKVAEIISEIQQYQTQIFFLIQS 272
EG + + + Y T +Q
Sbjct: 224 EGPEPWGSTEHGVEVVLAHLEAARTVAHHGGLYHTNAEVKLQG 266
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 36.8 bits (84), Expect = 0.007
Identities = 12/116 (10%), Positives = 35/116 (30%), Gaps = 12/116 (10%)
Query: 107 YSPNLIKIM--KHTTNFTRWLEKIIVEAENFDERLAIMTRIIEMMIVLQKLNNFNGVLAV 164
+ + K + + I+ E D + + + + L + V
Sbjct: 25 FEDAFVDNFDCKDVQDMPK----SILSKEEIDHIIMSKDAVSGTLRLFWTLLS-KQEEMV 79
Query: 165 TSAMGSAAVYRLRFTFQALPTRLQKVLEDARELNGDHFKKYQEKLRNINPPCIPFF 220
+ LR ++ L + ++ + + + +++L N N +
Sbjct: 80 QKFVEEV----LRINYKFLMSPIKTEQRQ-PSMMTRMYIEQRDRLYNDNQVFAKYN 130
Score = 34.4 bits (78), Expect = 0.036
Identities = 31/287 (10%), Positives = 86/287 (29%), Gaps = 85/287 (29%)
Query: 24 DIVLNLIQRKELDLEKEITFAFNNSPPPIEVHVPINSIDEFNILIAHPVEIARQL--TLL 81
D+ +++ ++E+D I S + + + F L++ E+ ++ +L
Sbjct: 40 DMPKSILSKEEID---HII----MSKDAVSGTLRL-----FWTLLSKQEEMVQKFVEEVL 87
Query: 82 EFDY--------FRSVKPSELVGSVWTKKNKA-----EYSPNLIKIMKHTTNFTRWLEK- 127
+Y +PS + ++++ ++ + ++ + L +
Sbjct: 88 RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL 147
Query: 128 -----IIV-------------EAENFDERLAIMTRII---------EMMIVLQKLNNFNG 160
+++ + + M I VL+ L
Sbjct: 148 RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLY 207
Query: 161 VLAVTSAMGSAAVYRLRFTFQALPTRLQKVLEDARELNGDHFKKYQEKL---RNI-NPPC 216
+ S ++ ++ L+++L+ K Y+ L N+ N
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS---------KPYENCLLVLLNVQNAKA 258
Query: 217 IPFFGMYLTNILHIEEGNPDFLPDSKLINFTKRRKVAEIISEIQQYQ 263
F + K++ T+ ++V + +S
Sbjct: 259 WNAF---------------NL--SCKILLTTRFKQVTDFLSAATTTH 288
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 33.5 bits (76), Expect = 0.087
Identities = 41/343 (11%), Positives = 89/343 (25%), Gaps = 141/343 (41%)
Query: 8 SFLLNEISGKSLRKWADIVLNLIQRKELDLEKEITFAFNNSPPPIEVHVPINSIDEFNIL 67
++ + + + ++ ++ + E E + N ++H + +
Sbjct: 66 GYVSSLVEPSKVGQFDQVLNLCLT------EFENCYLEGN-----DIHALAAKLLQ---- 110
Query: 68 IAHPVEIARQLTLLEFDYFRSVK----------PSELVGSVWTKKNK------------- 104
+ + + L++ +Y + S L +V +
Sbjct: 111 -ENDTTLVKTKELIK-NYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDD 168
Query: 105 ---------AEYSP---NLIKIM------------------KHTTNFTRWLEKIIVEAEN 134
Y +LIK N WLE N
Sbjct: 169 YFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLE----NPSN 224
Query: 135 F--DERLA--------I-MTRIIEMMIVLQKL--------NNFNGVLAVTSAMGSAAV-- 173
+ L I + ++ ++ + L + G + + +A
Sbjct: 225 TPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIA 284
Query: 174 --------YR-----LRFTF-------QALP-TRL-QKVLEDARELNGDHFKKYQEKLRN 211
+ + F +A P T L +LED+ E N +
Sbjct: 285 ETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLE-NNE----------- 332
Query: 212 INPPCIPFF---GMYLTNIL-HIEEGNPDFLPDSK-----LIN 245
P P + + ++ + N LP K L+N
Sbjct: 333 -GVPS-PMLSISNLTQEQVQDYVNKTN-SHLPAGKQVEISLVN 372
>2do9_A NALP10, nacht-, LRR- and PYD-containing protein 10; apoptosis,
inflammation, structural genomics, NPPSFA; NMR {Mus
musculus}
Length = 115
Score = 29.4 bits (66), Expect = 0.48
Identities = 8/32 (25%), Positives = 13/32 (40%), Gaps = 3/32 (9%)
Query: 187 LQKVLEDARELNGDHFKKYQEKLRNINPPCIP 218
L L D L + FK + LR++ +
Sbjct: 20 LLWALND---LEENSFKTLKFHLRDVTQFHLA 48
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 26.5 bits (57), Expect = 8.0
Identities = 9/56 (16%), Positives = 18/56 (32%), Gaps = 31/56 (55%)
Query: 3 LEKLKSFLLNEISGKSLRKWADIVLNLIQRKELDLEKEITFAFNNSPPPIEVHVPI 58
L+KL++ SL+ +AD +S P + + +
Sbjct: 22 LKKLQA---------SLKLYAD----------------------DSAPALAIKATM 46
>1eke_A Ribonuclease HII; endonuclease, structural genomics, BSGC structure
funded by NIH, protein structure initiative, PSI; HET:
MES; 2.00A {Methanocaldococcus jannaschii} SCOP:
c.55.3.1
Length = 230
Score = 26.6 bits (59), Expect = 8.3
Identities = 6/27 (22%), Positives = 14/27 (51%)
Query: 240 DSKLINFTKRRKVAEIISEIQQYQTQI 266
DSK + KR + +++ + + +I
Sbjct: 40 DSKELTKNKRAYLKKLLENLGYVEKRI 66
>3n7c_A ABR034WP; nuclear pore complex, NUP2, RAN-binding domain,
nucleoporin, structural genomics, PSI-2, protein
structure initiative; 2.26A {Ashbya gossypii} PDB:
3oan_A
Length = 130
Score = 26.0 bits (57), Expect = 8.8
Identities = 12/93 (12%), Positives = 35/93 (37%), Gaps = 4/93 (4%)
Query: 112 IKIMKHTTNFTRWLEKIIVEAENFDERLAIMTRII-EMMIVLQKLNNFNGVLAVTSAMGS 170
+K+++ + + +++ +E + + T ++ +N N + G
Sbjct: 38 LKLLRKKDDKGKV--RVLCRSEG-MGHVLLNTSVVKSFKYQPIDADNENLIKWPIITDGK 94
Query: 171 AAVYRLRFTFQALPTRLQKVLEDARELNGDHFK 203
+ ++ +A RL + DA++ H
Sbjct: 95 LETFIIKVKQKADGRRLVGAVADAQQAMEGHHH 127
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2,
protein structure initiative; 2.00A {Lactobacillus
plantarum}
Length = 449
Score = 26.5 bits (59), Expect = 9.8
Identities = 6/47 (12%), Positives = 14/47 (29%)
Query: 38 EKEITFAFNNSPPPIEVHVPINSIDEFNILIAHPVEIARQLTLLEFD 84
+ +T V + + N+L P E+ ++
Sbjct: 375 GEALTAWIPLKGQVTAVATKLAAGSYQNLLTDGPTEVVDGKLTVDGQ 421
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.138 0.397
Gapped
Lambda K H
0.267 0.0530 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,307,550
Number of extensions: 266128
Number of successful extensions: 615
Number of sequences better than 10.0: 1
Number of HSP's gapped: 598
Number of HSP's successfully gapped: 28
Length of query: 272
Length of database: 6,701,793
Length adjustment: 92
Effective length of query: 180
Effective length of database: 4,133,061
Effective search space: 743950980
Effective search space used: 743950980
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (25.8 bits)