Query psy3020
Match_columns 150
No_of_seqs 103 out of 1639
Neff 10.0
Searched_HMMs 29240
Date Fri Aug 16 23:30:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3020.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3020hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.9 6E-21 2E-25 121.2 11.7 107 2-146 18-125 (126)
2 3vtx_A MAMA; tetratricopeptide 99.8 7.2E-20 2.5E-24 122.0 12.3 133 2-150 10-155 (184)
3 4ga2_A E3 SUMO-protein ligase 99.8 1.3E-19 4.3E-24 118.2 10.1 110 2-149 36-147 (150)
4 4ga2_A E3 SUMO-protein ligase 99.8 4.2E-19 1.4E-23 115.7 6.9 110 2-149 2-112 (150)
5 4gyw_A UDP-N-acetylglucosamine 99.8 2.4E-18 8.3E-23 136.8 12.0 132 2-149 14-158 (723)
6 3gyz_A Chaperone protein IPGC; 99.8 5.5E-18 1.9E-22 110.9 11.2 107 2-148 41-148 (151)
7 3urz_A Uncharacterized protein 99.8 3E-18 1E-22 117.0 10.4 109 2-148 9-134 (208)
8 2pl2_A Hypothetical conserved 99.8 1.1E-17 3.9E-22 114.9 12.3 131 2-149 10-164 (217)
9 3sz7_A HSC70 cochaperone (SGT) 99.8 2.2E-17 7.6E-22 108.4 12.6 109 2-148 16-125 (164)
10 4gcn_A Protein STI-1; structur 99.7 1.2E-17 4.1E-22 105.9 10.3 102 2-134 13-115 (127)
11 3upv_A Heat shock protein STI1 99.7 4.3E-17 1.5E-21 102.5 11.9 110 2-149 9-125 (126)
12 2pl2_A Hypothetical conserved 99.7 6E-17 2.1E-21 111.2 12.5 131 2-149 44-198 (217)
13 2h6f_A Protein farnesyltransfe 99.7 2.3E-17 8E-22 122.6 10.7 131 2-148 102-246 (382)
14 2h6f_A Protein farnesyltransfe 99.7 2.6E-17 8.9E-22 122.3 10.4 112 22-149 88-213 (382)
15 2hr2_A Hypothetical protein; a 99.7 4.4E-17 1.5E-21 106.8 9.8 106 2-145 16-145 (159)
16 2vgx_A Chaperone SYCD; alterna 99.7 2.3E-16 7.9E-21 102.5 12.6 105 2-144 26-131 (148)
17 4i17_A Hypothetical protein; T 99.7 8.5E-17 2.9E-21 110.5 11.1 138 2-149 12-166 (228)
18 3gyz_A Chaperone protein IPGC; 99.7 1.7E-17 5.9E-22 108.5 6.7 107 6-150 11-118 (151)
19 2xcb_A PCRH, regulatory protei 99.7 2.9E-16 1E-20 100.9 12.1 107 2-146 23-130 (142)
20 2lni_A Stress-induced-phosphop 99.7 4.2E-16 1.4E-20 97.7 12.1 110 2-149 21-131 (133)
21 1hxi_A PEX5, peroxisome target 99.7 3.4E-16 1.2E-20 98.4 10.1 98 2-137 22-120 (121)
22 3rkv_A Putative peptidylprolyl 99.7 3.8E-16 1.3E-20 102.3 10.5 108 2-147 16-143 (162)
23 2vyi_A SGTA protein; chaperone 99.7 1.9E-15 6.4E-20 94.1 12.7 110 2-149 17-127 (131)
24 4i17_A Hypothetical protein; T 99.7 1.3E-15 4.6E-20 104.5 12.5 107 27-149 3-130 (228)
25 1p5q_A FKBP52, FK506-binding p 99.7 1.1E-15 3.8E-20 111.5 12.6 110 2-149 152-277 (336)
26 1elw_A TPR1-domain of HOP; HOP 99.6 5.2E-15 1.8E-19 90.6 12.4 108 2-147 9-117 (118)
27 1zu2_A Mitochondrial import re 99.6 1.1E-15 3.9E-20 100.0 9.3 108 7-144 12-133 (158)
28 1na0_A Designed protein CTPR3; 99.6 7.7E-15 2.6E-19 90.6 12.7 110 2-149 14-124 (125)
29 2r5s_A Uncharacterized protein 99.6 2.2E-15 7.6E-20 100.0 10.0 131 2-149 11-157 (176)
30 2fbn_A 70 kDa peptidylprolyl i 99.6 6.9E-15 2.4E-19 99.2 12.3 110 2-149 43-169 (198)
31 3q49_B STIP1 homology and U bo 99.6 6.7E-15 2.3E-19 93.1 11.4 107 2-146 14-126 (137)
32 1kt0_A FKBP51, 51 kDa FK506-bi 99.6 4.4E-15 1.5E-19 112.5 11.7 110 2-149 273-398 (457)
33 4eqf_A PEX5-related protein; a 99.6 1.1E-14 3.8E-19 106.0 13.3 63 2-74 104-167 (365)
34 3u4t_A TPR repeat-containing p 99.6 8E-15 2.7E-19 102.4 11.7 130 2-148 8-155 (272)
35 1a17_A Serine/threonine protei 99.6 1.8E-14 6.3E-19 93.5 12.5 106 2-145 18-124 (166)
36 4abn_A Tetratricopeptide repea 99.6 6.2E-15 2.1E-19 112.1 11.2 132 2-149 107-271 (474)
37 3qky_A Outer membrane assembly 99.6 1.5E-14 5E-19 101.3 12.1 113 2-149 20-161 (261)
38 1w3b_A UDP-N-acetylglucosamine 99.6 1E-14 3.6E-19 107.1 11.8 131 2-148 72-215 (388)
39 3qou_A Protein YBBN; thioredox 99.6 1.8E-14 6.3E-19 102.8 12.3 132 2-149 122-268 (287)
40 1fch_A Peroxisomal targeting s 99.6 4.7E-14 1.6E-18 102.4 14.7 133 2-148 103-263 (368)
41 2dba_A Smooth muscle cell asso 99.6 4.2E-14 1.4E-18 90.1 12.8 108 2-147 33-144 (148)
42 2yhc_A BAMD, UPF0169 lipoprote 99.6 1.7E-14 5.8E-19 99.3 11.2 136 2-150 46-198 (225)
43 2pzi_A Probable serine/threoni 99.6 3.1E-15 1.1E-19 118.3 8.2 131 2-148 438-580 (681)
44 2pzi_A Probable serine/threoni 99.6 2.5E-15 8.6E-20 118.8 7.6 127 2-145 472-616 (681)
45 3qky_A Outer membrane assembly 99.6 2.3E-14 7.7E-19 100.4 11.7 127 2-149 57-198 (261)
46 1w3b_A UDP-N-acetylglucosamine 99.6 2.1E-14 7.3E-19 105.4 11.9 132 2-149 242-386 (388)
47 3uq3_A Heat shock protein STI1 99.6 1.1E-14 3.6E-19 100.6 9.3 61 2-72 43-111 (258)
48 3urz_A Uncharacterized protein 99.6 1.4E-14 4.7E-19 98.8 9.6 122 3-137 60-192 (208)
49 3as5_A MAMA; tetratricopeptide 99.6 7.7E-14 2.6E-18 91.5 12.9 132 2-149 13-157 (186)
50 2vgx_A Chaperone SYCD; alterna 99.6 1.8E-14 6E-19 93.5 9.6 94 18-149 8-102 (148)
51 3vtx_A MAMA; tetratricopeptide 99.6 1.8E-14 6.3E-19 95.6 9.9 125 2-144 44-181 (184)
52 4gco_A Protein STI-1; structur 99.6 1.4E-14 4.6E-19 91.6 8.7 91 21-149 3-94 (126)
53 1wao_1 Serine/threonine protei 99.6 2E-14 6.7E-19 109.6 10.8 106 2-145 11-117 (477)
54 3uq3_A Heat shock protein STI1 99.6 4.4E-14 1.5E-18 97.5 11.6 109 2-148 84-219 (258)
55 4eqf_A PEX5-related protein; a 99.6 2E-14 6.9E-19 104.6 10.3 109 3-149 183-294 (365)
56 3u4t_A TPR repeat-containing p 99.6 5.1E-14 1.7E-18 98.3 11.9 131 2-149 42-189 (272)
57 2vsy_A XCC0866; transferase, g 99.6 5.6E-14 1.9E-18 108.5 13.1 110 2-149 28-138 (568)
58 2fo7_A Synthetic consensus TPR 99.6 1.2E-13 4.3E-18 85.9 12.5 110 2-149 6-116 (136)
59 2xev_A YBGF; tetratricopeptide 99.6 9.7E-14 3.3E-18 86.8 11.6 108 2-144 7-118 (129)
60 4g1t_A Interferon-induced prot 99.6 5.1E-14 1.8E-18 105.6 12.1 133 3-148 142-293 (472)
61 1fch_A Peroxisomal targeting s 99.6 5.4E-14 1.9E-18 102.0 11.8 131 2-149 187-343 (368)
62 4abn_A Tetratricopeptide repea 99.6 2.7E-14 9.2E-19 108.6 10.4 113 2-149 175-305 (474)
63 3mkr_A Coatomer subunit epsilo 99.6 8.3E-14 2.9E-18 99.7 12.4 127 2-149 106-247 (291)
64 2c2l_A CHIP, carboxy terminus 99.5 6.6E-14 2.2E-18 99.7 11.5 102 2-141 9-111 (281)
65 3k9i_A BH0479 protein; putativ 99.5 1.3E-14 4.4E-19 90.2 6.9 99 9-145 2-104 (117)
66 2vq2_A PILW, putative fimbrial 99.5 2.9E-13 9.8E-18 91.6 14.0 132 2-149 13-160 (225)
67 1hh8_A P67PHOX, NCF-2, neutrop 99.5 1.6E-13 5.5E-18 92.8 12.7 107 2-149 11-134 (213)
68 3as5_A MAMA; tetratricopeptide 99.5 1.6E-13 5.3E-18 90.0 12.2 104 30-149 7-123 (186)
69 2xcb_A PCRH, regulatory protei 99.5 3.4E-14 1.2E-18 91.2 8.4 94 18-149 5-99 (142)
70 2q7f_A YRRB protein; TPR, prot 99.5 1.9E-13 6.7E-18 93.6 12.7 132 2-149 62-206 (243)
71 1ihg_A Cyclophilin 40; ppiase 99.5 6.8E-14 2.3E-18 103.5 10.9 110 2-149 228-354 (370)
72 3ieg_A DNAJ homolog subfamily 99.5 9.1E-14 3.1E-18 99.9 11.3 136 2-149 159-319 (359)
73 2q7f_A YRRB protein; TPR, prot 99.5 1.6E-13 5.3E-18 94.1 12.0 130 2-147 96-238 (243)
74 1elr_A TPR2A-domain of HOP; HO 99.5 2E-13 6.8E-18 84.9 11.1 115 2-148 9-124 (131)
75 2kck_A TPR repeat; tetratricop 99.5 1.2E-13 4.1E-18 83.7 9.8 99 2-136 11-111 (112)
76 1hh8_A P67PHOX, NCF-2, neutrop 99.5 3.3E-13 1.1E-17 91.3 12.9 124 2-147 42-166 (213)
77 3hym_B Cell division cycle pro 99.5 2.8E-13 9.7E-18 96.5 13.1 61 3-73 131-192 (330)
78 1xnf_A Lipoprotein NLPI; TPR, 99.5 2.8E-13 9.6E-18 94.5 12.6 103 2-142 48-151 (275)
79 3ieg_A DNAJ homolog subfamily 99.5 3.2E-13 1.1E-17 97.1 12.9 132 2-149 42-201 (359)
80 3hym_B Cell division cycle pro 99.5 2.7E-13 9.3E-18 96.6 12.4 133 2-149 61-206 (330)
81 3cv0_A Peroxisome targeting si 99.5 8.3E-13 2.8E-17 94.0 14.8 131 2-148 60-218 (327)
82 3cv0_A Peroxisome targeting si 99.5 3E-13 1E-17 96.3 12.1 128 6-149 147-299 (327)
83 2ho1_A Type 4 fimbrial biogene 99.5 5E-13 1.7E-17 92.4 12.7 132 2-149 42-188 (252)
84 2e2e_A Formate-dependent nitri 99.5 6.4E-13 2.2E-17 87.7 11.7 100 3-140 50-153 (177)
85 2if4_A ATFKBP42; FKBP-like, al 99.5 5.2E-14 1.8E-18 102.8 7.0 108 2-147 184-309 (338)
86 2e2e_A Formate-dependent nitri 99.5 3.6E-14 1.2E-18 93.8 5.3 107 5-149 18-128 (177)
87 2y4t_A DNAJ homolog subfamily 99.5 5.3E-13 1.8E-17 99.3 10.6 132 2-149 65-224 (450)
88 2ho1_A Type 4 fimbrial biogene 99.4 3.3E-12 1.1E-16 88.2 13.2 132 2-149 76-222 (252)
89 3fp2_A TPR repeat-containing p 99.4 8.9E-13 3.1E-17 100.0 11.1 131 2-149 248-391 (537)
90 1qqe_A Vesicular transport pro 99.4 4.5E-13 1.5E-17 95.6 8.9 116 2-149 82-212 (292)
91 2y4t_A DNAJ homolog subfamily 99.4 1.1E-12 3.9E-17 97.5 11.2 131 2-148 216-375 (450)
92 2yhc_A BAMD, UPF0169 lipoprote 99.4 1.5E-12 5E-17 89.6 10.8 103 2-139 9-133 (225)
93 4gyw_A UDP-N-acetylglucosamine 99.4 2.5E-13 8.4E-18 108.2 7.5 118 2-135 48-178 (723)
94 1xnf_A Lipoprotein NLPI; TPR, 99.4 2.8E-13 9.6E-18 94.4 6.8 108 4-149 12-124 (275)
95 2vsy_A XCC0866; transferase, g 99.4 1E-12 3.6E-17 101.5 10.1 102 10-149 2-104 (568)
96 4g1t_A Interferon-induced prot 99.4 1.3E-12 4.4E-17 98.0 10.4 60 2-71 56-125 (472)
97 2vq2_A PILW, putative fimbrial 99.4 7.2E-12 2.5E-16 84.6 12.7 132 2-149 47-195 (225)
98 2xpi_A Anaphase-promoting comp 99.4 5.1E-12 1.8E-16 97.2 12.7 132 2-149 344-488 (597)
99 2gw1_A Mitochondrial precursor 99.4 1.1E-11 3.8E-16 93.3 13.9 137 2-149 44-283 (514)
100 3fp2_A TPR repeat-containing p 99.4 5.6E-12 1.9E-16 95.6 12.0 103 30-149 242-357 (537)
101 2gw1_A Mitochondrial precursor 99.4 1.4E-11 4.8E-16 92.7 13.0 130 2-148 242-384 (514)
102 2xpi_A Anaphase-promoting comp 99.4 6.6E-12 2.3E-16 96.6 11.1 109 2-148 480-596 (597)
103 2ond_A Cleavage stimulation fa 99.4 1.7E-11 5.8E-16 87.9 12.5 131 2-148 104-253 (308)
104 2fo7_A Synthetic consensus TPR 99.3 2.2E-11 7.4E-16 75.5 11.4 96 2-135 40-136 (136)
105 3edt_B KLC 2, kinesin light ch 99.3 4.5E-12 1.5E-16 88.2 7.5 116 2-149 48-182 (283)
106 2l6j_A TPR repeat-containing p 99.3 1.6E-11 5.3E-16 74.5 8.9 94 2-127 9-103 (111)
107 3upv_A Heat shock protein STI1 99.3 1.9E-11 6.6E-16 76.3 9.1 84 28-149 1-85 (126)
108 1p5q_A FKBP52, FK506-binding p 99.3 1.4E-12 4.9E-17 95.0 3.8 118 9-149 125-243 (336)
109 3mkr_A Coatomer subunit epsilo 99.3 2.6E-11 8.8E-16 86.7 10.3 128 2-150 70-214 (291)
110 2kat_A Uncharacterized protein 99.3 6.2E-11 2.1E-15 72.9 10.4 86 14-137 2-88 (115)
111 1qqe_A Vesicular transport pro 99.3 7.7E-12 2.6E-16 89.2 6.7 115 3-149 43-171 (292)
112 2qfc_A PLCR protein; TPR, HTH, 99.3 3.8E-11 1.3E-15 85.5 9.9 114 2-149 120-249 (293)
113 3ulq_A Response regulator aspa 99.3 1.3E-11 4.5E-16 90.6 7.7 116 2-149 148-277 (383)
114 3edt_B KLC 2, kinesin light ch 99.2 2.7E-11 9.4E-16 84.2 7.8 98 2-131 90-198 (283)
115 3u3w_A Transcriptional activat 99.2 3.7E-11 1.3E-15 85.5 8.5 116 3-149 121-249 (293)
116 3sz7_A HSC70 cochaperone (SGT) 99.2 8.1E-11 2.8E-15 76.8 9.3 87 25-149 5-92 (164)
117 2c2l_A CHIP, carboxy terminus 99.2 3.6E-11 1.2E-15 85.5 8.2 126 2-146 43-179 (281)
118 2kc7_A BFR218_protein; tetratr 99.2 1.8E-11 6.2E-16 73.2 5.5 90 2-137 5-96 (99)
119 3q49_B STIP1 homology and U bo 99.2 1.5E-10 5E-15 72.8 10.0 87 25-149 3-90 (137)
120 1na3_A Designed protein CTPR2; 99.2 1.2E-10 4.2E-15 68.1 9.0 86 26-149 3-90 (91)
121 1dce_A Protein (RAB geranylger 99.2 7.8E-11 2.7E-15 91.6 10.1 110 4-149 70-191 (567)
122 3ulq_A Response regulator aspa 99.2 6.8E-11 2.3E-15 86.8 9.2 116 3-149 109-237 (383)
123 1kt0_A FKBP51, 51 kDa FK506-bi 99.2 3.9E-12 1.3E-16 96.3 2.6 118 9-149 246-364 (457)
124 2ond_A Cleavage stimulation fa 99.2 3.3E-10 1.1E-14 81.2 12.1 125 9-149 69-216 (308)
125 4gcn_A Protein STI-1; structur 99.2 5.1E-11 1.8E-15 75.0 6.8 83 28-148 5-95 (127)
126 1ouv_A Conserved hypothetical 99.2 4.3E-10 1.5E-14 78.8 12.2 127 2-148 11-158 (273)
127 4a1s_A PINS, partner of inscut 99.2 2.2E-10 7.6E-15 84.3 10.7 116 2-149 53-179 (411)
128 2kck_A TPR repeat; tetratricop 99.2 7.2E-11 2.5E-15 71.2 6.7 86 26-149 1-89 (112)
129 1wao_1 Serine/threonine protei 99.2 1.9E-11 6.5E-16 93.1 4.5 103 2-142 45-161 (477)
130 1a17_A Serine/threonine protei 99.2 3.2E-10 1.1E-14 73.1 9.7 97 2-134 52-149 (166)
131 3nf1_A KLC 1, kinesin light ch 99.2 2.7E-10 9.2E-15 80.3 10.0 116 2-149 74-208 (311)
132 2ifu_A Gamma-SNAP; membrane fu 99.2 5.2E-11 1.8E-15 85.5 6.3 136 3-148 42-207 (307)
133 3q15_A PSP28, response regulat 99.2 8.6E-11 3E-15 86.3 7.5 116 2-149 146-274 (378)
134 3sf4_A G-protein-signaling mod 99.1 4.3E-10 1.5E-14 82.1 10.9 116 2-149 14-140 (406)
135 3ro2_A PINS homolog, G-protein 99.1 6.5E-10 2.2E-14 78.7 11.6 116 2-149 10-136 (338)
136 2fbn_A 70 kDa peptidylprolyl i 99.1 3E-11 1E-15 81.2 4.4 125 3-149 10-135 (198)
137 1dce_A Protein (RAB geranylger 99.1 3.7E-10 1.3E-14 87.8 11.0 113 7-149 38-156 (567)
138 3dra_A Protein farnesyltransfe 99.1 4.5E-10 1.5E-14 81.1 10.6 130 6-149 41-193 (306)
139 2hr2_A Hypothetical protein; a 99.1 2.9E-10 9.8E-15 74.4 8.5 93 31-149 11-115 (159)
140 3dra_A Protein farnesyltransfe 99.1 8E-10 2.7E-14 79.8 11.7 103 11-149 124-233 (306)
141 1hxi_A PEX5, peroxisome target 99.1 4E-10 1.4E-14 70.3 8.9 79 33-149 19-98 (121)
142 3ro3_A PINS homolog, G-protein 99.1 1.6E-10 5.6E-15 73.7 6.4 116 2-149 14-142 (164)
143 2if4_A ATFKBP42; FKBP-like, al 99.1 8.7E-11 3E-15 85.7 5.6 98 2-137 235-334 (338)
144 3nf1_A KLC 1, kinesin light ch 99.1 7.1E-10 2.4E-14 78.2 9.8 116 2-149 32-166 (311)
145 1ouv_A Conserved hypothetical 99.1 2E-09 6.8E-14 75.3 12.0 125 2-148 79-230 (273)
146 3gw4_A Uncharacterized protein 99.1 5.2E-10 1.8E-14 74.6 8.2 100 2-132 31-137 (203)
147 2qfc_A PLCR protein; TPR, HTH, 99.1 5.8E-09 2E-13 74.1 14.0 115 3-149 81-209 (293)
148 2ifu_A Gamma-SNAP; membrane fu 99.1 2.7E-10 9.2E-15 81.7 7.1 47 102-149 116-168 (307)
149 3sf4_A G-protein-signaling mod 99.1 2.3E-10 7.7E-15 83.6 6.7 138 2-149 52-240 (406)
150 4a1s_A PINS, partner of inscut 99.1 5.8E-10 2E-14 82.0 8.9 48 102-149 223-276 (411)
151 3q7a_A Farnesyltransferase alp 99.1 1.4E-09 4.9E-14 79.7 10.6 106 6-148 63-171 (349)
152 3rjv_A Putative SEL1 repeat pr 99.1 1.9E-09 6.7E-14 73.4 10.3 131 2-148 23-174 (212)
153 3dss_A Geranylgeranyl transfer 99.1 2.3E-09 7.7E-14 78.1 11.1 101 13-149 90-192 (331)
154 3rjv_A Putative SEL1 repeat pr 99.0 1.4E-09 4.8E-14 74.1 9.3 117 14-148 3-137 (212)
155 3q15_A PSP28, response regulat 99.0 9.5E-10 3.3E-14 80.7 9.0 117 2-149 106-235 (378)
156 3dss_A Geranylgeranyl transfer 99.0 3.3E-09 1.1E-13 77.3 11.6 111 8-149 40-157 (331)
157 2lni_A Stress-induced-phosphop 99.0 2E-09 6.9E-14 66.7 9.2 86 26-149 11-97 (133)
158 1na3_A Designed protein CTPR2; 99.0 2.8E-09 9.5E-14 62.1 9.0 62 2-73 14-76 (91)
159 3ma5_A Tetratricopeptide repea 99.0 9.8E-10 3.4E-14 66.2 6.9 76 26-139 2-78 (100)
160 3u3w_A Transcriptional activat 99.0 5.1E-09 1.7E-13 74.4 11.5 114 4-149 82-209 (293)
161 3ro2_A PINS homolog, G-protein 99.0 7.5E-10 2.6E-14 78.4 6.7 138 2-149 48-236 (338)
162 2dba_A Smooth muscle cell asso 99.0 2.4E-09 8.2E-14 67.7 8.3 92 23-149 20-112 (148)
163 2ooe_A Cleavage stimulation fa 99.0 7.2E-09 2.5E-13 79.3 12.4 119 3-137 327-460 (530)
164 2vyi_A SGTA protein; chaperone 99.0 2.4E-09 8.1E-14 66.0 7.9 88 24-149 5-93 (131)
165 3q7a_A Farnesyltransferase alp 99.0 8E-09 2.7E-13 75.7 11.6 137 4-148 95-254 (349)
166 3rkv_A Putative peptidylprolyl 99.0 2.4E-09 8.1E-14 69.6 7.8 93 30-150 10-111 (162)
167 4f3v_A ESX-1 secretion system 99.0 1.9E-09 6.6E-14 76.8 7.7 44 2-46 107-151 (282)
168 1elw_A TPR1-domain of HOP; HOP 98.9 1.2E-08 3.9E-13 61.7 9.6 82 30-149 3-85 (118)
169 2r5s_A Uncharacterized protein 98.9 3.9E-09 1.3E-13 69.5 8.0 115 2-130 45-172 (176)
170 1na0_A Designed protein CTPR3; 98.9 1.3E-08 4.5E-13 62.0 9.7 86 26-149 3-90 (125)
171 3ma5_A Tetratricopeptide repea 98.9 2.7E-09 9.3E-14 64.2 5.8 62 2-73 12-74 (100)
172 3qou_A Protein YBBN; thioredox 98.9 6.1E-09 2.1E-13 74.1 8.1 116 2-131 156-284 (287)
173 3k9i_A BH0479 protein; putativ 98.9 3.6E-09 1.2E-13 65.2 6.0 64 2-75 32-96 (117)
174 2xev_A YBGF; tetratricopeptide 98.9 9.3E-09 3.2E-13 63.7 7.9 82 33-149 4-89 (129)
175 3bee_A Putative YFRE protein; 98.9 2.2E-08 7.7E-13 59.7 9.1 76 27-137 2-78 (93)
176 1zu2_A Mitochondrial import re 98.9 3.6E-09 1.2E-13 69.1 5.6 48 102-149 36-93 (158)
177 1elr_A TPR2A-domain of HOP; HO 98.9 1.1E-08 3.7E-13 63.0 7.6 84 28-149 1-92 (131)
178 1ihg_A Cyclophilin 40; ppiase 98.8 1.9E-08 6.6E-13 74.2 9.8 84 2-123 278-362 (370)
179 3ro3_A PINS homolog, G-protein 98.8 1.3E-08 4.6E-13 64.6 7.2 101 2-134 54-161 (164)
180 2kat_A Uncharacterized protein 98.8 2.2E-08 7.5E-13 61.2 7.3 48 102-149 19-66 (115)
181 3gw4_A Uncharacterized protein 98.8 2.7E-08 9.3E-13 66.1 7.7 103 2-136 71-181 (203)
182 2ooe_A Cleavage stimulation fa 98.8 7.4E-08 2.5E-12 73.7 11.0 124 10-149 292-438 (530)
183 1hz4_A MALT regulatory protein 98.7 5.8E-08 2E-12 70.7 9.0 116 2-149 19-148 (373)
184 3mv2_B Coatomer subunit epsilo 98.7 3.5E-07 1.2E-11 65.9 11.7 131 2-149 105-268 (310)
185 2kc7_A BFR218_protein; tetratr 98.7 1.9E-07 6.6E-12 55.3 8.8 67 36-140 5-73 (99)
186 1pc2_A Mitochondria fission pr 98.7 2.4E-07 8.2E-12 60.0 9.4 101 11-144 12-113 (152)
187 2l6j_A TPR repeat-containing p 98.7 4.6E-08 1.6E-12 58.9 5.8 55 89-149 31-91 (111)
188 4f3v_A ESX-1 secretion system 98.7 2.7E-07 9.2E-12 65.7 10.5 103 2-140 140-245 (282)
189 3e4b_A ALGK; tetratricopeptide 98.7 2.8E-07 9.5E-12 69.6 11.0 127 2-148 181-330 (452)
190 3ly7_A Transcriptional activat 98.6 2.2E-07 7.6E-12 68.3 9.8 124 4-139 203-347 (372)
191 3e4b_A ALGK; tetratricopeptide 98.6 2.1E-07 7.1E-12 70.3 9.6 127 2-148 218-366 (452)
192 4b4t_Q 26S proteasome regulato 98.6 1.5E-07 5.1E-12 69.6 8.5 137 3-149 10-188 (434)
193 2xm6_A Protein corresponding t 98.6 6.3E-07 2.2E-11 67.9 11.7 45 102-148 363-411 (490)
194 1hz4_A MALT regulatory protein 98.6 3.8E-07 1.3E-11 66.3 10.1 58 2-69 58-122 (373)
195 2xm6_A Protein corresponding t 98.6 1.1E-06 3.8E-11 66.5 12.1 130 2-148 44-195 (490)
196 1b89_A Protein (clathrin heavy 98.5 1.4E-06 4.7E-11 65.7 10.6 44 105-148 210-253 (449)
197 1klx_A Cysteine rich protein B 98.5 1.8E-06 6.2E-11 54.8 9.6 99 3-142 31-135 (138)
198 3n71_A Histone lysine methyltr 98.5 6.4E-07 2.2E-11 68.5 8.3 113 5-148 317-447 (490)
199 1xi4_A Clathrin heavy chain; a 98.4 3.3E-06 1.1E-10 71.3 11.3 56 2-72 1110-1166(1630)
200 1klx_A Cysteine rich protein B 98.4 3.3E-06 1.1E-10 53.5 9.1 92 11-148 9-105 (138)
201 3qww_A SET and MYND domain-con 98.3 1.6E-06 5.4E-11 65.4 8.0 99 8-137 309-422 (433)
202 2v5f_A Prolyl 4-hydroxylase su 98.3 4.1E-06 1.4E-10 50.6 8.4 42 102-143 46-87 (104)
203 3bee_A Putative YFRE protein; 98.3 2.3E-06 8E-11 50.8 6.4 61 2-72 11-75 (93)
204 3qwp_A SET and MYND domain-con 98.3 3.6E-06 1.2E-10 63.4 8.5 113 6-149 296-426 (429)
205 1xi4_A Clathrin heavy chain; a 98.2 1.2E-05 4.1E-10 68.0 10.8 118 2-148 1200-1326(1630)
206 4b4t_Q 26S proteasome regulato 98.2 3.6E-06 1.2E-10 62.1 6.6 124 2-138 60-211 (434)
207 2v5f_A Prolyl 4-hydroxylase su 98.1 7E-06 2.4E-10 49.5 5.9 65 2-76 10-82 (104)
208 3u64_A Protein TP_0956; tetrat 98.0 1E-05 3.4E-10 57.7 6.2 88 11-135 177-273 (301)
209 1nzn_A CGI-135 protein, fissio 98.0 7.2E-05 2.5E-09 46.8 9.1 103 10-145 14-117 (126)
210 1b89_A Protein (clathrin heavy 98.0 1.7E-05 5.9E-10 59.8 7.0 113 3-148 213-340 (449)
211 3n71_A Histone lysine methyltr 97.9 4.1E-05 1.4E-09 58.6 8.0 101 2-132 356-465 (490)
212 3u64_A Protein TP_0956; tetrat 97.8 9.6E-05 3.3E-09 52.7 7.9 47 102-148 199-251 (301)
213 3mv2_B Coatomer subunit epsilo 97.6 0.00065 2.2E-08 48.9 9.3 123 2-140 141-291 (310)
214 1pc2_A Mitochondria fission pr 97.5 0.00014 4.8E-09 47.0 4.6 43 2-44 76-119 (152)
215 1nzn_A CGI-135 protein, fissio 97.1 0.00078 2.7E-08 42.1 4.6 39 2-40 79-117 (126)
216 3qww_A SET and MYND domain-con 97.0 0.00067 2.3E-08 51.1 4.7 56 2-67 345-409 (433)
217 3o48_A Mitochondria fission 1 96.9 0.0029 9.9E-08 39.8 5.7 39 2-40 83-121 (134)
218 3ly7_A Transcriptional activat 96.8 0.0031 1.1E-07 46.5 6.6 61 3-74 283-344 (372)
219 1y8m_A FIS1; mitochondria, unk 96.8 0.026 9E-07 35.9 9.9 43 102-144 77-119 (144)
220 1y8m_A FIS1; mitochondria, unk 96.7 0.0043 1.5E-07 39.5 5.5 39 2-40 82-120 (144)
221 3o48_A Mitochondria fission 1 96.5 0.04 1.4E-06 34.6 9.2 43 102-144 78-120 (134)
222 4e6h_A MRNA 3'-END-processing 96.4 0.024 8.3E-07 45.1 9.4 116 3-134 384-536 (679)
223 4e6h_A MRNA 3'-END-processing 96.2 0.071 2.4E-06 42.4 10.9 41 4-44 350-392 (679)
224 3qwp_A SET and MYND domain-con 96.1 0.0082 2.8E-07 45.1 5.2 56 2-67 334-398 (429)
225 1zbp_A Hypothetical protein VP 95.9 0.23 7.9E-06 34.9 11.1 122 3-136 3-134 (273)
226 4gns_B Protein CSD3, chitin bi 95.4 0.12 4E-06 41.7 9.3 48 103-150 338-385 (754)
227 3ffl_A Anaphase-promoting comp 94.6 0.19 6.6E-06 32.7 7.1 50 100-149 61-135 (167)
228 4h7y_A Dual specificity protei 93.6 0.18 6.1E-06 32.5 5.3 70 7-91 70-140 (161)
229 3ffl_A Anaphase-promoting comp 93.0 0.33 1.1E-05 31.6 6.0 43 2-44 68-136 (167)
230 3txn_A 26S proteasome regulato 92.4 0.96 3.3E-05 33.6 8.5 101 2-133 104-212 (394)
231 3ax2_A Mitochondrial import re 92.3 0.24 8.2E-06 27.6 4.1 37 2-38 22-58 (73)
232 4g26_A Pentatricopeptide repea 92.0 3.2 0.00011 31.6 12.0 33 102-134 175-209 (501)
233 3mkq_B Coatomer subunit alpha; 91.9 1.7 6E-05 28.5 8.5 35 7-46 15-50 (177)
234 4g26_A Pentatricopeptide repea 91.6 3.5 0.00012 31.4 11.4 45 102-147 140-186 (501)
235 1ya0_A SMG-7 transcript varian 91.6 0.45 1.5E-05 36.5 6.2 46 103-148 153-198 (497)
236 2uy1_A Cleavage stimulation fa 91.6 3.2 0.00011 31.5 11.0 51 13-74 195-246 (493)
237 2uy1_A Cleavage stimulation fa 91.4 1.9 6.4E-05 32.8 9.5 42 102-144 213-254 (493)
238 3ax2_A Mitochondrial import re 90.9 0.51 1.7E-05 26.3 4.4 33 102-134 17-49 (73)
239 1ya0_A SMG-7 transcript varian 90.8 0.52 1.8E-05 36.1 5.8 42 3-44 158-200 (497)
240 4b4t_R RPN7, 26S proteasome re 89.8 3.6 0.00012 30.7 9.6 101 2-134 136-240 (429)
241 2ff4_A Probable regulatory pro 89.5 0.41 1.4E-05 35.3 4.3 44 3-46 177-221 (388)
242 2crb_A Nuclear receptor bindin 88.6 0.83 2.9E-05 26.6 4.2 29 102-130 15-43 (97)
243 1om2_A Protein (mitochondrial 88.3 0.43 1.5E-05 28.0 2.9 38 2-39 25-62 (95)
244 3t5x_A PCI domain-containing p 87.9 1.9 6.6E-05 28.8 6.4 38 101-138 13-50 (203)
245 4a5x_A MITD1, MIT domain-conta 87.5 1.6 5.4E-05 25.0 5.0 30 102-131 16-45 (86)
246 1om2_A Protein (mitochondrial 87.4 0.96 3.3E-05 26.5 4.0 33 102-134 20-52 (95)
247 4gns_B Protein CSD3, chitin bi 87.0 1.3 4.5E-05 35.7 5.9 40 7-46 347-387 (754)
248 4b4t_P 26S proteasome regulato 86.8 4.5 0.00016 30.3 8.5 96 2-131 142-247 (445)
249 2w2u_A Hypothetical P60 katani 86.2 2 6.9E-05 24.4 4.9 30 102-131 19-48 (83)
250 2v6y_A AAA family ATPase, P60 84.4 2.7 9.4E-05 23.8 4.9 30 102-131 11-40 (83)
251 2llv_A Heat shock protein STI1 83.8 0.2 6.8E-06 27.8 -0.1 42 57-98 9-50 (71)
252 2rpa_A Katanin P60 ATPase-cont 82.4 0.72 2.5E-05 26.0 1.8 24 2-25 17-40 (78)
253 2ff4_A Probable regulatory pro 81.9 3.4 0.00012 30.3 5.9 48 102-149 171-218 (388)
254 2v6x_A Vacuolar protein sortin 81.6 4 0.00014 23.1 4.9 30 102-131 13-42 (85)
255 2crb_A Nuclear receptor bindin 81.4 1.5 5.2E-05 25.5 3.0 21 4-24 22-42 (97)
256 4h7y_A Dual specificity protei 80.8 8.9 0.0003 24.7 12.1 46 102-148 94-139 (161)
257 1wfd_A Hypothetical protein 15 80.2 4.6 0.00016 23.4 4.9 30 102-131 15-44 (93)
258 2cpt_A SKD1 protein, vacuolar 79.7 4.4 0.00015 24.6 4.9 30 102-131 18-47 (117)
259 2w2u_A Hypothetical P60 katani 79.2 1.8 6.1E-05 24.6 2.8 21 4-24 26-46 (83)
260 3mkq_A Coatomer beta'-subunit; 78.1 11 0.00038 29.7 8.0 34 8-46 663-697 (814)
261 2v6y_A AAA family ATPase, P60 77.9 2 7E-05 24.3 2.8 21 4-24 18-38 (83)
262 2vkj_A TM1634; membrane protei 77.5 4.9 0.00017 23.2 4.2 49 100-148 51-102 (106)
263 2lnm_A Protein TIC 40, chlorop 76.8 1.2 4.1E-05 23.8 1.5 37 62-98 3-39 (62)
264 4a5x_A MITD1, MIT domain-conta 75.4 2.3 7.8E-05 24.3 2.6 22 4-25 23-44 (86)
265 3kae_A CDC27, possible protein 74.1 16 0.00056 24.2 10.1 105 2-135 38-147 (242)
266 3mkq_A Coatomer beta'-subunit; 73.8 22 0.00074 28.0 8.7 23 2-24 686-708 (814)
267 4b4t_S RPN3, 26S proteasome re 73.2 4.9 0.00017 31.0 4.6 41 102-142 270-310 (523)
268 2cfu_A SDSA1; SDS-hydrolase, l 72.9 5.7 0.0002 31.5 5.1 44 3-46 455-499 (658)
269 3mv2_A Coatomer subunit alpha; 72.9 21 0.00071 25.8 7.5 35 102-136 207-241 (325)
270 2rpa_A Katanin P60 ATPase-cont 71.9 4.1 0.00014 22.9 3.0 27 105-131 15-41 (78)
271 2cfu_A SDSA1; SDS-hydrolase, l 71.0 9.2 0.00032 30.3 5.9 48 102-149 449-496 (658)
272 3mkq_B Coatomer subunit alpha; 70.8 5.3 0.00018 26.2 3.8 28 102-129 34-61 (177)
273 1wfd_A Hypothetical protein 15 69.4 3.8 0.00013 23.7 2.6 21 4-24 22-42 (93)
274 3kae_A CDC27, possible protein 66.3 26 0.00088 23.3 12.4 28 107-134 213-240 (242)
275 3t5x_A PCI domain-containing p 64.7 7.7 0.00026 25.8 3.7 30 3-32 20-49 (203)
276 1zbp_A Hypothetical protein VP 63.0 28 0.00095 24.5 6.3 45 87-137 22-66 (273)
277 3t5v_B Nuclear mRNA export pro 62.2 14 0.00047 28.0 5.1 37 100-136 218-255 (455)
278 2cpt_A SKD1 protein, vacuolar 61.4 6.3 0.00022 23.9 2.6 21 5-25 26-46 (117)
279 3bu8_A Telomeric repeat-bindin 59.6 19 0.00064 24.5 4.8 40 5-44 122-162 (235)
280 2yhe_A SEC-alkyl sulfatase; hy 56.3 3.2 0.00011 33.0 0.0 44 3-46 467-511 (668)
281 3bqo_A Telomeric repeat-bindin 50.7 13 0.00046 24.9 2.9 40 5-44 125-165 (211)
282 3bqo_A Telomeric repeat-bindin 47.8 27 0.00091 23.4 4.0 38 106-143 121-158 (211)
283 3s6n_M SurviVal motor neuron p 46.6 15 0.00051 17.1 1.9 16 12-27 17-32 (37)
284 2wpv_A GET4, UPF0363 protein Y 46.6 77 0.0026 22.6 10.8 25 102-126 134-158 (312)
285 3txn_A 26S proteasome regulato 43.7 96 0.0033 22.9 8.1 28 106-133 103-130 (394)
286 4gof_A Small glutamine-rich te 43.0 25 0.00086 18.0 2.7 23 116-138 28-50 (52)
287 3spa_A Mtrpol, DNA-directed RN 42.6 1.6E+02 0.0055 25.2 11.7 90 3-131 133-230 (1134)
288 4b4t_S RPN3, 26S proteasome re 37.2 34 0.0012 26.4 3.7 44 3-46 276-327 (523)
289 2yhe_A SEC-alkyl sulfatase; hy 41.9 7.8 0.00027 30.9 0.0 47 103-149 462-508 (668)
290 2ijq_A Hypothetical protein; s 35.5 87 0.003 20.0 7.0 37 3-39 38-77 (161)
291 2ymb_A MITD1, MIT domain-conta 34.9 8.1 0.00028 26.9 0.0 26 106-131 27-52 (257)
292 2ca5_A MXIH; transport protein 33.3 25 0.00087 19.9 1.9 25 116-140 24-48 (85)
293 3mv2_A Coatomer subunit alpha; 33.1 51 0.0018 23.8 3.9 28 106-133 118-145 (325)
294 3lpz_A GET4 (YOR164C homolog); 32.7 1.4E+02 0.0048 21.6 10.0 24 102-125 136-159 (336)
295 3kez_A Putative sugar binding 32.5 68 0.0023 24.0 4.7 32 100-131 194-225 (461)
296 3myv_A SUSD superfamily protei 32.1 71 0.0024 23.8 4.7 32 100-131 188-219 (454)
297 3lew_A SUSD-like carbohydrate 32.1 70 0.0024 24.2 4.7 32 100-131 201-232 (495)
298 3mcx_A SUSD superfamily protei 31.5 72 0.0025 23.9 4.7 33 100-132 200-232 (477)
299 3mkr_B Coatomer subunit alpha; 31.1 61 0.0021 23.3 4.0 29 105-133 105-133 (320)
300 3hdx_A SUSD homolog, SUSD supe 29.7 81 0.0028 23.6 4.7 32 100-131 195-226 (478)
301 4aez_C MAD3, mitotic spindle c 27.4 48 0.0017 22.5 2.8 30 3-32 156-185 (223)
302 4aez_C MAD3, mitotic spindle c 27.2 1.5E+02 0.0051 20.1 6.3 32 102-133 150-181 (223)
303 3snx_A SUSD homolog, putative 27.1 74 0.0025 23.8 4.1 32 100-131 189-220 (460)
304 2g0u_A Type III secretion syst 26.7 97 0.0033 17.8 3.8 25 12-36 31-55 (92)
305 3esl_A Checkpoint serine/threo 25.3 1.5E+02 0.0053 19.7 6.5 32 102-133 115-146 (202)
306 2pmr_A Uncharacterized protein 25.1 1E+02 0.0035 17.5 4.0 27 102-128 39-65 (87)
307 3mkr_B Coatomer subunit alpha; 25.0 1.9E+02 0.0066 20.7 11.7 34 102-135 198-231 (320)
308 2br9_A 14-3-3E, 14-3-3 protein 24.4 1.4E+02 0.0048 20.3 4.7 32 103-134 6-37 (234)
309 3qnk_A Putative lipoprotein; a 24.4 1.1E+02 0.0037 23.2 4.6 32 100-131 180-211 (517)
310 2oo2_A Hypothetical protein AF 24.1 1.1E+02 0.0036 17.4 4.0 27 102-128 35-61 (86)
311 2e2a_A Protein (enzyme IIA); h 24.0 1.2E+02 0.004 17.9 4.3 29 102-130 20-48 (105)
312 3eab_A Spastin; spastin, MIT, 23.9 52 0.0018 18.9 2.1 14 116-129 33-46 (89)
313 1wcr_A PTS system, N, N'-diace 23.5 1.2E+02 0.0041 17.8 4.3 28 102-129 18-45 (103)
314 2qx5_A Nucleoporin NIC96; mRNA 23.4 2.5E+02 0.0086 22.4 6.6 33 102-135 536-570 (661)
315 2etd_A LEMA protein; bromodoma 23.3 47 0.0016 21.5 2.1 29 111-139 119-147 (171)
316 2wvi_A Mitotic checkpoint seri 23.0 1.5E+02 0.0053 18.9 6.3 32 102-133 96-127 (164)
317 3snx_A SUSD homolog, putative 22.8 68 0.0023 24.0 3.2 30 102-131 321-351 (460)
318 2lxb_A Small glutamine-rich te 22.1 76 0.0026 17.5 2.5 22 116-137 33-54 (74)
319 3bu8_A Telomeric repeat-bindin 21.8 2E+02 0.0067 19.6 6.7 36 107-142 119-154 (235)
320 3myv_A SUSD superfamily protei 21.6 68 0.0023 23.9 3.0 30 102-131 335-366 (454)
321 3re2_A Predicted protein; meni 21.6 1.2E+02 0.0041 22.6 4.0 29 102-130 296-324 (472)
322 3spa_A Mtrpol, DNA-directed RN 21.5 2E+02 0.0068 24.7 5.8 45 102-147 165-211 (1134)
323 3lew_A SUSD-like carbohydrate 21.2 69 0.0024 24.2 3.0 25 2-26 208-232 (495)
324 3k1s_A PTS system, cellobiose- 21.0 1.4E+02 0.0048 17.7 4.3 28 102-129 22-49 (109)
325 3mcx_A SUSD superfamily protei 20.8 72 0.0025 23.9 3.0 29 102-130 357-386 (477)
326 3i4g_A SUSD-like carbohydrate 20.8 1.5E+02 0.005 22.7 4.7 31 100-130 196-226 (528)
327 3l8r_A PTCA, putative PTS syst 20.5 1.5E+02 0.0052 17.9 4.3 28 102-129 37-64 (120)
328 3kez_A Putative sugar binding 20.5 73 0.0025 23.8 3.0 30 102-131 338-367 (461)
329 2xze_A STAM-binding protein; h 20.4 1.7E+02 0.0057 18.2 4.6 37 102-138 40-80 (146)
330 1o9d_A 14-3-3-like protein C; 20.1 2E+02 0.0068 20.0 4.8 30 103-132 9-38 (260)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.86 E-value=6e-21 Score=121.22 Aligned_cols=107 Identities=18% Similarity=0.238 Sum_probs=99.8
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
..|.+|++.|+|++|+++|++||+++|+++.++..+|.+ ..+| ++.+|+ ..+.+++.++|++
T Consensus 18 ~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~--------~~~~A~--~~~~~al~~~p~~------- 80 (126)
T 4gco_A 18 NKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLM--------EFQRAL--DDCDTCIRLDSKF------- 80 (126)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC-------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhc--------cHHHHH--HHHHHHHHhhhhh-------
Confidence 479999999999999999999999999999999999999 9999 778888 8888888888864
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHH
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAF 146 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~ 146 (150)
+.+|..+|.++...|++++|+++|+++++++|+++.++.+++.|+
T Consensus 81 ---------------------~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 81 ---------------------IKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp ---------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred ---------------------hHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 778999999999999999999999999999999999999998874
No 2
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.83 E-value=7.2e-20 Score=122.02 Aligned_cols=133 Identities=15% Similarity=0.138 Sum_probs=109.2
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCC---
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFL--- 77 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~--- 77 (150)
.+|.+|...|+|++|+++|+++|+++|+++.++..+|.+ ..+| ++.+++ ..+...+...|+.....
T Consensus 10 ~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~--------~~~~a~--~~~~~~~~~~~~~~~~~~~~ 79 (184)
T 3vtx_A 10 DIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIG--------LPNDAI--ESLKKFVVLDTTSAEAYYIL 79 (184)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCCCCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCC--------CHHHHH--HHHHHHHhcCchhHHHHHHH
Confidence 589999999999999999999999999999999999999 9999 667777 77888888888766431
Q ss_pred -------CCh-HHHHH-HHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 78 -------SDP-SYVQM-IKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 78 -------~~~-~~~~~-~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
.+. ..... ...+...|.. +.++..+|.++...|++++|+++|+++++++|+++.+|+++|.+|.+
T Consensus 80 ~~~~~~~~~~~~a~~~~~~a~~~~~~~------~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~ 153 (184)
T 3vtx_A 80 GSANFMIDEKQAAIDALQRAIALNTVY------ADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEG 153 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCccc------hHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHH
Confidence 110 01111 1113334444 88999999999999999999999999999999999999999999987
Q ss_pred cC
Q psy3020 149 AI 150 (150)
Q Consensus 149 ~~ 150 (150)
++
T Consensus 154 ~g 155 (184)
T 3vtx_A 154 KG 155 (184)
T ss_dssp TT
T ss_pred CC
Confidence 63
No 3
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.81 E-value=1.3e-19 Score=118.19 Aligned_cols=110 Identities=7% Similarity=0.001 Sum_probs=93.2
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.+|+..|+|++|+++|+++|+++|+++.+|..+|.+ ..+| ++.+|+ ..+.+++.++|++
T Consensus 36 ~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~--------~~~~A~--~~~~~al~~~p~~------- 98 (150)
T 4ga2_A 36 YFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEE--------NTDKAV--ECYRRSVELNPTQ------- 98 (150)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC-------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC--------chHHHH--HHHHHHHHhCCCC-------
Confidence 578888888888888888888888888888888888888 8888 667777 7777777777754
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHH-HHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAY-SEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~-~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+.+|..+|.++.+.|++++|.+.| +++++++|+++.+|..++.++..+
T Consensus 99 ---------------------~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~~ 147 (150)
T 4ga2_A 99 ---------------------KDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDCE 147 (150)
T ss_dssp ---------------------HHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHTC
T ss_pred ---------------------HHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHh
Confidence 778899999999999998888765 899999999999999998887654
No 4
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.78 E-value=4.2e-19 Score=115.70 Aligned_cols=110 Identities=12% Similarity=0.046 Sum_probs=98.9
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.||.++...|++++|++.|++++..+|+++.++..+|.+ ..+| ++.+|+ ..+.+++.++|++
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~--------~~~~A~--~~~~~al~~~p~~------- 64 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAK--------EYDLAK--KYICTYINVQERD------- 64 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC-------
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCCCC-------
Confidence 589999999999999999999999999999999999999 9999 778888 8888888888864
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+.+|..+|.++...|++++|+.+|+++++++|+++.+|+++|.+|.++
T Consensus 65 ---------------------~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 112 (150)
T 4ga2_A 65 ---------------------PKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKN 112 (150)
T ss_dssp ---------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred ---------------------HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 788999999999999999999999999999999999999999999865
No 5
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.77 E-value=2.4e-18 Score=136.75 Aligned_cols=132 Identities=16% Similarity=0.227 Sum_probs=113.4
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCC-
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSD- 79 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~- 79 (150)
++|.+|..+|++++|+++|++||+++|+++.++..+|.+ ..+| ++.+|+ ..+.+++.++|++...+..
T Consensus 14 nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g--------~~~eA~--~~~~~Al~l~P~~~~a~~nL 83 (723)
T 4gyw_A 14 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG--------KLQEAL--MHYKEAIRISPTFADAYSNM 83 (723)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCCCCHHHHHHH
Confidence 689999999999999999999999999999999999999 9999 778888 8999999999998764211
Q ss_pred -------hHHHHHH----HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 80 -------PSYVQMI----KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 80 -------~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
..+..++ +.++.+|.. +.+|.++|.++...|++++|+++|++|++++|+++.+++|+|.+|..
T Consensus 84 g~~l~~~g~~~~A~~~~~kAl~l~P~~------~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~ 157 (723)
T 4gyw_A 84 GNTLKEMQDVQGALQCYTRAIQINPAF------ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQI 157 (723)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHh
Confidence 1122222 224456655 89999999999999999999999999999999999999999999976
Q ss_pred c
Q psy3020 149 A 149 (150)
Q Consensus 149 ~ 149 (150)
+
T Consensus 158 ~ 158 (723)
T 4gyw_A 158 V 158 (723)
T ss_dssp T
T ss_pred c
Confidence 5
No 6
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.77 E-value=5.5e-18 Score=110.86 Aligned_cols=107 Identities=13% Similarity=0.105 Sum_probs=95.5
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.+++..|++++|+..|+++++++|+++.+|..+|.+ ..+| .+.+|+ ..+.+++.++|++
T Consensus 41 ~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g--------~~~~Ai--~~~~~al~l~P~~------- 103 (151)
T 3gyz_A 41 SYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKE--------QFQQAA--DLYAVAFALGKND------- 103 (151)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHSSSC-------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc--------cHHHHH--HHHHHHHhhCCCC-------
Confidence 579999999999999999999999999999999999999 9999 778888 8888888888865
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
+.+|.++|.++...|++++|+++|++++++.|+++ ...++..++.
T Consensus 104 ---------------------~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~--~~~~A~~ll~ 148 (151)
T 3gyz_A 104 ---------------------YTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK--LKIKAQSYLD 148 (151)
T ss_dssp ---------------------CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH--HHHHHHHHHH
T ss_pred ---------------------cHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH--HHHHHHHHHH
Confidence 67899999999999999999999999999999876 4555555543
No 7
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.77 E-value=3e-18 Score=117.04 Aligned_cols=109 Identities=13% Similarity=0.155 Sum_probs=100.7
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHH----------------HHHH-HhhhhccCCCCCchhhhhCChHHH
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEA----------------IKDV-RNQEMNDMNRGDPFANLFSDPNIF 64 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~----------------l~~~-~~~g~~~~~~~~~~~~a~~~~~~~ 64 (150)
..|.+++..|++++|+..|+++++++|+++.++.. +|.+ ..+| ++.+|+ ..+.
T Consensus 9 ~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g--------~~~~A~--~~~~ 78 (208)
T 3urz_A 9 QKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNR--------NYDKAY--LFYK 78 (208)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCC--------CHHHHH--HHHH
Confidence 46889999999999999999999999999999999 9999 8999 778888 8888
Q ss_pred HhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHH
Q psy3020 65 VQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSA 144 (150)
Q Consensus 65 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~ 144 (150)
+++.++|++ +.+|..+|.++...|++++|+++|+++++++|+++.+|+++|.
T Consensus 79 ~al~~~p~~----------------------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~ 130 (208)
T 3urz_A 79 ELLQKAPNN----------------------------VDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGN 130 (208)
T ss_dssp HHHHHCTTC----------------------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHCCCC----------------------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 888888864 7789999999999999999999999999999999999999999
Q ss_pred HHHh
Q psy3020 145 AFAK 148 (150)
Q Consensus 145 ~~~~ 148 (150)
+|+.
T Consensus 131 ~~~~ 134 (208)
T 3urz_A 131 YYYL 134 (208)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9864
No 8
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.76 E-value=1.1e-17 Score=114.86 Aligned_cols=131 Identities=15% Similarity=0.114 Sum_probs=109.8
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCC-
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSD- 79 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~- 79 (150)
.+|.++...|++++|+..|+++++++|+++.++..+|.+ ...| .+.+|+ ..+.+++.++|++...+..
T Consensus 10 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g--------~~~~A~--~~~~~al~~~P~~~~a~~~l 79 (217)
T 2pl2_A 10 RLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLG--------LVNPAL--ENGKTLVARTPRYLGGYMVL 79 (217)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCCCcHHHHHHH
Confidence 579999999999999999999999999999999999999 9999 778888 8899999999987653211
Q ss_pred ------------------hHHHHHH----HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcc
Q psy3020 80 ------------------PSYVQMI----KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHI 137 (150)
Q Consensus 80 ------------------~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~ 137 (150)
+.+...+ ..+..+|.. +.+|..+|.++...|++++|+.+|+++++++ +++.
T Consensus 80 g~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~ 152 (217)
T 2pl2_A 80 SEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRY------APLHLQRGLVYALLGERDKAEASLKQALALE-DTPE 152 (217)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHH
T ss_pred HHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCccc------HHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchH
Confidence 1111222 113345555 8899999999999999999999999999999 9999
Q ss_pred hhhcHHHHHHhc
Q psy3020 138 LFSNRSAAFAKA 149 (150)
Q Consensus 138 ~~~n~a~~~~~~ 149 (150)
+++++|.+|..+
T Consensus 153 ~~~~la~~~~~~ 164 (217)
T 2pl2_A 153 IRSALAELYLSM 164 (217)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 999999999865
No 9
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.76 E-value=2.2e-17 Score=108.41 Aligned_cols=109 Identities=17% Similarity=0.209 Sum_probs=100.2
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.+++..|+|++|+..|+++++++|+++.++..++.+ ..+| ++.+|+ ..+.+++.++|++
T Consensus 16 ~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g--------~~~~A~--~~~~~al~~~p~~------- 78 (164)
T 3sz7_A 16 SEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASG--------QHEKAA--EDAELATVVDPKY------- 78 (164)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC-------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHcc--------CHHHHH--HHHHHHHHhCCCC-------
Confidence 479999999999999999999999999999999999999 9999 777888 8888888888854
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
+.+|..+|.+++..|++++|+++|+++++++|+++..|++++.+.++
T Consensus 79 ---------------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~ 125 (164)
T 3sz7_A 79 ---------------------SKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTK 125 (164)
T ss_dssp ---------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHH
T ss_pred ---------------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 77899999999999999999999999999999999999999888654
No 10
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.75 E-value=1.2e-17 Score=105.89 Aligned_cols=102 Identities=14% Similarity=0.158 Sum_probs=90.5
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.+++..|+|++|+++|++||+++|+++.++..+|.+ ..+| ++.+|+ ..+.+++.++|+.....
T Consensus 13 ~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~--------~~~~A~--~~~~~al~~~~~~~~~~--- 79 (127)
T 4gcn_A 13 DLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEK--------KFAECV--QFCEKAVEVGRETRADY--- 79 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHHHTTCCH---
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhh--------hHHHHH--HHHHHHHHhCcccchhh---
Confidence 489999999999999999999999999999999999999 9999 778888 88888888888654421
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCC
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGT 134 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 134 (150)
.. ...++..+|.++...|++++|+++|+++++.+|+
T Consensus 80 --~~----------------~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 80 --KL----------------IAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp --HH----------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC
T ss_pred --HH----------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 11 1678999999999999999999999999999995
No 11
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.74 E-value=4.3e-17 Score=102.46 Aligned_cols=110 Identities=13% Similarity=0.130 Sum_probs=100.6
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.+++..|+|++|+..|+++++++|+++.++..+|.+ ..+| ++.+|+ ..+.+++.++|++
T Consensus 9 ~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~--------~~~~A~--~~~~~al~~~p~~------- 71 (126)
T 3upv_A 9 LEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLM--------SFPEAI--ADCNKAIEKDPNF------- 71 (126)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC-------
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhc--------CHHHHH--HHHHHHHHhCCCc-------
Confidence 479999999999999999999999999999999999999 9999 778888 8888888888854
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc------CCCcchhhcHHHHHHhc
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLD------GTNHILFSNRSAAFAKA 149 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~n~a~~~~~~ 149 (150)
+.+|..+|.++...|++++|+++|+++++++ |+++.++..++.|..++
T Consensus 72 ---------------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 72 ---------------------VRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp ---------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred ---------------------HHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 6789999999999999999999999999999 99999999998887654
No 12
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.73 E-value=6e-17 Score=111.23 Aligned_cols=131 Identities=10% Similarity=0.029 Sum_probs=108.3
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-Hhh-----------hhccCCCCCchhhhhCChHHHHhhcc
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQ-----------EMNDMNRGDPFANLFSDPNIFVQLQL 69 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~-----------g~~~~~~~~~~~~a~~~~~~~~~l~~ 69 (150)
.+|.++...|++++|+..|+++++++|+++.++..+|.+ ..+ | ++.+|+ ..+.+++.+
T Consensus 44 ~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g--------~~~~A~--~~~~~al~~ 113 (217)
T 2pl2_A 44 WLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKG--------YLEQAL--SVLKDAERV 113 (217)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHH--------HHHHHH--HHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhccccc--------CHHHHH--HHHHHHHHh
Confidence 589999999999999999999999999999999999999 888 8 678888 889999999
Q ss_pred CCCCCCCCC--------ChHHHHHHHH----HhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcc
Q psy3020 70 DPRTKPFLS--------DPSYVQMIKE----IQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHI 137 (150)
Q Consensus 70 ~~~~~~~~~--------~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~ 137 (150)
+|++..... .+.+...+.. +..+ .. +..+..+|.++...|++++|+..|+++++++|+++.
T Consensus 114 ~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~ 186 (217)
T 2pl2_A 114 NPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DT------PEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLD 186 (217)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHH
T ss_pred CcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cc------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH
Confidence 998765321 0111111111 2222 33 788999999999999999999999999999999999
Q ss_pred hhhcHHHHHHhc
Q psy3020 138 LFSNRSAAFAKA 149 (150)
Q Consensus 138 ~~~n~a~~~~~~ 149 (150)
+++++|.++..+
T Consensus 187 ~~~~la~~~~~~ 198 (217)
T 2pl2_A 187 LRVRYASALLLK 198 (217)
T ss_dssp HHHHHHHHHTC-
T ss_pred HHHHHHHHHHHc
Confidence 999999998764
No 13
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.73 E-value=2.3e-17 Score=122.57 Aligned_cols=131 Identities=8% Similarity=0.100 Sum_probs=103.3
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCc-hhhhhCChHHHHhhccCCCCCCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDP-FANLFSDPNIFVQLQLDPRTKPFLSD 79 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~-~~~a~~~~~~~~~l~~~~~~~~~~~~ 79 (150)
.+|.++...|++++|+..|+++|+++|++..+|..++.+ ..+| . +.+|+ ..+.+++.++|++...+..
T Consensus 102 ~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g--------~d~~eAl--~~~~~al~l~P~~~~a~~~ 171 (382)
T 2h6f_A 102 YFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQ--------KDLHEEM--NYITAIIEEQPKNYQVWHH 171 (382)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CCHHHHH--HHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcc--------cCHHHHH--HHHHHHHHHCCCCHHHHHH
Confidence 468888999999999999999999999999999999988 8888 5 67788 8888888889987653211
Q ss_pred ------------hHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHH
Q psy3020 80 ------------PSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFA 147 (150)
Q Consensus 80 ------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~ 147 (150)
......-+.+..+|.. +.+|..+|.++...|++++|+.+|+++|+++|+++.+|+++|.++.
T Consensus 172 ~g~~~~~~g~~~eAl~~~~kal~ldP~~------~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~ 245 (382)
T 2h6f_A 172 RRVLVEWLRDPSQELEFIADILNQDAKN------YHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVIS 245 (382)
T ss_dssp HHHHHHHHTCCTTHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCccC------HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 0111111224445544 8889999999999999999999999999999999999999998887
Q ss_pred h
Q psy3020 148 K 148 (150)
Q Consensus 148 ~ 148 (150)
.
T Consensus 246 ~ 246 (382)
T 2h6f_A 246 N 246 (382)
T ss_dssp H
T ss_pred H
Confidence 6
No 14
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.72 E-value=2.6e-17 Score=122.31 Aligned_cols=112 Identities=9% Similarity=0.081 Sum_probs=91.5
Q ss_pred HhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCC--------hH-HHHHH----H
Q psy3020 22 EGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSD--------PS-YVQMI----K 87 (150)
Q Consensus 22 ~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~--------~~-~~~~~----~ 87 (150)
.++.++|++..++..++.+ ...| .+.+|+ ..+.+++.++|++..++.. .. +...+ +
T Consensus 88 ~ai~~~p~~~~a~~~lg~~~~~~g--------~~~~Al--~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~ 157 (382)
T 2h6f_A 88 VQIIYSDKFRDVYDYFRAVLQRDE--------RSERAF--KLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITA 157 (382)
T ss_dssp SEECCCHHHHHHHHHHHHHHHHTC--------CCHHHH--HHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred hhhhCChhhHHHHHHHHHHHHHCC--------ChHHHH--HHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHH
Confidence 5789999999999999999 8888 678888 8999999999998764210 11 12221 2
Q ss_pred HHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 88 EIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 88 ~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
.+..+|.. +.+|..+|.++...|++++|+.+|+++|+++|+++.+|+++|.++..+
T Consensus 158 al~l~P~~------~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~ 213 (382)
T 2h6f_A 158 IIEEQPKN------YQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEF 213 (382)
T ss_dssp HHHHCTTC------HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHc
Confidence 24445555 899999999999999999999999999999999999999999999865
No 15
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.72 E-value=4.4e-17 Score=106.81 Aligned_cols=106 Identities=8% Similarity=0.104 Sum_probs=91.6
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCC-------cHH-----HHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhc
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPN-------NEQ-----MKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQ 68 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~-------~~~-----a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~ 68 (150)
..|.+++..|+|++|+..|++||+++|+ +.. +|..+|.+ ..+| .+.+|+ ..+.+++.
T Consensus 16 ~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lg--------r~~eAl--~~~~kAL~ 85 (159)
T 2hr2_A 16 SDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLR--------SFDEAL--HSADKALH 85 (159)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCC--------CHHHHH--HHHHHHHH
Confidence 5799999999999999999999999999 444 99999999 9999 667777 77777777
Q ss_pred c-------CCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHH----HHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcc
Q psy3020 69 L-------DPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLL----KDKGNAALQANNFKEAIEAYSEAIKLDGTNHI 137 (150)
Q Consensus 69 ~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~ 137 (150)
+ +|++ +.+| +++|.++...|++++|+.+|+++++++|++..
T Consensus 86 l~n~~~e~~pd~----------------------------~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~ 137 (159)
T 2hr2_A 86 YFNRRGELNQDE----------------------------GKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKG 137 (159)
T ss_dssp HHHHHCCTTSTH----------------------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCS
T ss_pred hhhccccCCCch----------------------------HHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHH
Confidence 6 6643 6677 99999999999999999999999999999987
Q ss_pred hhhcHHHH
Q psy3020 138 LFSNRSAA 145 (150)
Q Consensus 138 ~~~n~a~~ 145 (150)
..--+..+
T Consensus 138 ~~~~~~~~ 145 (159)
T 2hr2_A 138 ETPGKERM 145 (159)
T ss_dssp CCTTHHHH
T ss_pred HHHHHHHH
Confidence 76655544
No 16
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.71 E-value=2.3e-16 Score=102.49 Aligned_cols=105 Identities=10% Similarity=0.027 Sum_probs=93.8
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.++...|++++|+..|+++++++|+++.++..+|.+ ..+| ++.+|+ ..+.+++.++|++
T Consensus 26 ~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g--------~~~~A~--~~~~~al~l~p~~------- 88 (148)
T 2vgx_A 26 SLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMG--------QYDLAI--HSYSYGAVMDIXE------- 88 (148)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHSTTC-------
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHh--------hHHHHH--HHHHHHHhcCCCC-------
Confidence 478999999999999999999999999999999999999 9999 777888 8888888888864
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHH
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSA 144 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~ 144 (150)
+.++..+|.++...|++++|+++|+++++++|+++.....+..
T Consensus 89 ---------------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~ 131 (148)
T 2vgx_A 89 ---------------------PRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTR 131 (148)
T ss_dssp ---------------------THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHH
T ss_pred ---------------------chHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHH
Confidence 6788999999999999999999999999999998876544333
No 17
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.71 E-value=8.5e-17 Score=110.50 Aligned_cols=138 Identities=15% Similarity=0.104 Sum_probs=100.9
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCC-CcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCC-
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDP-NNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLS- 78 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p-~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~- 78 (150)
.+|.+++..|++++|+..|+++++++| .+..++..+|.+ ..+| ++.+|+ ..+.+++..+|+....+.
T Consensus 12 ~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~--------~~~~A~--~~~~~al~~~p~~~~~~~~ 81 (228)
T 4i17_A 12 NEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIK--------KYKEAA--DYFDIAIKKNYNLANAYIG 81 (228)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHTTCSHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhh--------cHHHHH--HHHHHHHHhCcchHHHHHH
Confidence 468888888888888888888888888 788888888888 7888 667777 777778888887654210
Q ss_pred -------ChHHHHHH----HHHhcCcchhhhH-HHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCC--CcchhhcHHH
Q psy3020 79 -------DPSYVQMI----KEIQKDPSLMTLE-AKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGT--NHILFSNRSA 144 (150)
Q Consensus 79 -------~~~~~~~~----~~l~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~n~a~ 144 (150)
...+...+ ..+...|...... .-...|..+|.++...|++++|+++|+++++++|+ ++.+++++|.
T Consensus 82 l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~ 161 (228)
T 4i17_A 82 KSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGV 161 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHH
Confidence 01111111 1133334331000 11377999999999999999999999999999999 9999999999
Q ss_pred HHHhc
Q psy3020 145 AFAKA 149 (150)
Q Consensus 145 ~~~~~ 149 (150)
+|+.+
T Consensus 162 ~~~~~ 166 (228)
T 4i17_A 162 LFYNN 166 (228)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99764
No 18
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.71 E-value=1.7e-17 Score=108.48 Aligned_cols=107 Identities=8% Similarity=-0.071 Sum_probs=95.0
Q ss_pred HHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHH
Q psy3020 6 CLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQ 84 (150)
Q Consensus 6 ~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~ 84 (150)
++..++++-.+-..|+++++++|++++++..+|.+ ..+| ++.+|+ ..+.+++.++|++
T Consensus 11 ~~~~l~~~~~~~~~l~~al~l~p~~~~~~~~lg~~~~~~g--------~~~eA~--~~~~~al~~~P~~----------- 69 (151)
T 3gyz_A 11 ISTAVIDAINSGATLKDINAIPDDMMDDIYSYAYDFYNKG--------RIEEAE--VFFRFLCIYDFYN----------- 69 (151)
T ss_dssp HHHHHHHHHHTSCCTGGGCCSCHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC-----------
T ss_pred HHHHHHHHHHCCCCHHHHhCCCHHHHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCCCC-----------
Confidence 34555666666778999999999999999999999 9999 778888 8888888888864
Q ss_pred HHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhcC
Q psy3020 85 MIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKAI 150 (150)
Q Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~~ 150 (150)
+..|..+|.++...|+|++|+++|+++++++|+++.+|+++|.||..+.
T Consensus 70 -----------------~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg 118 (151)
T 3gyz_A 70 -----------------VDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLK 118 (151)
T ss_dssp -----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTT
T ss_pred -----------------HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcC
Confidence 7889999999999999999999999999999999999999999998763
No 19
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.70 E-value=2.9e-16 Score=100.91 Aligned_cols=107 Identities=9% Similarity=0.025 Sum_probs=95.6
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.++...|++++|+..|+++++++|+++.++..+|.+ ..+| ++.+|+ ..+.+++.++|++
T Consensus 23 ~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g--------~~~~A~--~~~~~al~~~p~~------- 85 (142)
T 2xcb_A 23 ALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLG--------LYEQAL--QSYSYGALMDINE------- 85 (142)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC-------
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHh--------hHHHHH--HHHHHHHhcCCCC-------
Confidence 478999999999999999999999999999999999999 9999 777888 8888888888864
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHH
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAF 146 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~ 146 (150)
+..+..+|.++...|++++|+++|+++++++|+++.....+..+.
T Consensus 86 ---------------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 130 (142)
T 2xcb_A 86 ---------------------PRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAG 130 (142)
T ss_dssp ---------------------THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHH
T ss_pred ---------------------cHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHH
Confidence 677899999999999999999999999999999987766555443
No 20
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.70 E-value=4.2e-16 Score=97.73 Aligned_cols=110 Identities=16% Similarity=0.237 Sum_probs=99.2
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.++...|++++|+..|+++++++|++..++..++.+ ...| ++.+++ ..+.+++..+|++
T Consensus 21 ~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~--------~~~~A~--~~~~~a~~~~~~~------- 83 (133)
T 2lni_A 21 NKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLL--------EFQLAL--KDCEECIQLEPTF------- 83 (133)
T ss_dssp HHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTT--------CHHHHH--HHHHHHHHHCTTC-------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhc--------cHHHHH--HHHHHHHHhCCCc-------
Confidence 478999999999999999999999999999999999999 8888 667777 6676677666642
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+..+..+|.++...|++++|+++|.++++++|++..++.+++.++..+
T Consensus 84 ---------------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 131 (133)
T 2lni_A 84 ---------------------IKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQ 131 (133)
T ss_dssp ---------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHH
T ss_pred ---------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHh
Confidence 678999999999999999999999999999999999999999999875
No 21
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.68 E-value=3.4e-16 Score=98.39 Aligned_cols=98 Identities=12% Similarity=0.080 Sum_probs=84.2
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.++...|++++|+..|+++++++|+++.++..+|.+ ..+| .+.+|+ ..+.+++.++|++
T Consensus 22 ~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g--------~~~~A~--~~~~~al~l~P~~------- 84 (121)
T 1hxi_A 22 EEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENE--------KDGLAI--IALNHARMLDPKD------- 84 (121)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC-------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCCCC-------
Confidence 478999999999999999999999999999999999999 9999 677888 8888888888864
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcc
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHI 137 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~ 137 (150)
+.++..+|.++...|++++|+..|+++++++|+++.
T Consensus 85 ---------------------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 85 ---------------------IAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred ---------------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCCC
Confidence 678999999999999999999999999999998754
No 22
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.68 E-value=3.8e-16 Score=102.28 Aligned_cols=108 Identities=16% Similarity=0.116 Sum_probs=96.8
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhcc------------------CCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChH
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKL------------------DPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPN 62 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~------------------~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~ 62 (150)
..|..++..|+|++|+..|++||++ +|.+..++..+|.+ ..+| ++.+|+ ..
T Consensus 16 ~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~--------~~~~A~--~~ 85 (162)
T 3rkv_A 16 QKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIG--------DLHEAE--ET 85 (162)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHT--------CHHHHH--HH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC--------cHHHHH--HH
Confidence 4799999999999999999999999 88888999999999 9999 778888 88
Q ss_pred HHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCc-chhhc
Q psy3020 63 IFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNH-ILFSN 141 (150)
Q Consensus 63 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~n 141 (150)
+.+++.++|++ +.+|..+|.+++..|++++|+.+|+++++++|+++ .+...
T Consensus 86 ~~~al~~~p~~----------------------------~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~ 137 (162)
T 3rkv_A 86 SSEVLKREETN----------------------------EKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVARE 137 (162)
T ss_dssp HHHHHHHSTTC----------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred HHHHHhcCCcc----------------------------hHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 88888888864 77899999999999999999999999999999998 66777
Q ss_pred HHHHHH
Q psy3020 142 RSAAFA 147 (150)
Q Consensus 142 ~a~~~~ 147 (150)
++.+..
T Consensus 138 l~~~~~ 143 (162)
T 3rkv_A 138 MKIVTE 143 (162)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776654
No 23
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.67 E-value=1.9e-15 Score=94.13 Aligned_cols=110 Identities=20% Similarity=0.190 Sum_probs=98.6
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.++...|++++|+..|+++++++|+++.++..++.+ ...| ++.+++ ..+.+.+..+|++
T Consensus 17 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~--------~~~~A~--~~~~~~~~~~~~~------- 79 (131)
T 2vyi_A 17 TEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLG--------NYAGAV--QDCERAICIDPAY------- 79 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC-------
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhh--------chHHHH--HHHHHHHhcCccC-------
Confidence 478999999999999999999999999999999999999 8888 667777 6666666666643
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+..+..+|.++...|++++|+++|.++++++|+++..+.++|.++..+
T Consensus 80 ---------------------~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 127 (131)
T 2vyi_A 80 ---------------------SKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKL 127 (131)
T ss_dssp ---------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred ---------------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHH
Confidence 678899999999999999999999999999999999999999999865
No 24
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.67 E-value=1.3e-15 Score=104.49 Aligned_cols=107 Identities=20% Similarity=0.179 Sum_probs=80.9
Q ss_pred CCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCC-CCCCCC--------CChHHHHHH----HHHhcC
Q psy3020 27 DPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDP-RTKPFL--------SDPSYVQMI----KEIQKD 92 (150)
Q Consensus 27 ~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~-~~~~~~--------~~~~~~~~~----~~l~~~ 92 (150)
.|.++.++..+|.+ ...| ++.+|+ ..+.+++..+| .+.... ....+...+ ..+..+
T Consensus 3 ~~~~~~~~~~~g~~~~~~~--------~~~~A~--~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 72 (228)
T 4i17_A 3 QTTDPNQLKNEGNDALNAK--------NYAVAF--EKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKN 72 (228)
T ss_dssp -CCCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred cccCHHHHHHHHHHHHHcc--------CHHHHH--HHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhC
Confidence 46678999999999 8999 778888 88888998887 443311 001111221 224455
Q ss_pred cchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCc-------chhhcHHHHHHhc
Q psy3020 93 PSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNH-------ILFSNRSAAFAKA 149 (150)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~-------~~~~n~a~~~~~~ 149 (150)
|.. +.+|..+|.++...|++++|+++|+++++++|+++ .+|+++|.++..+
T Consensus 73 p~~------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~ 130 (228)
T 4i17_A 73 YNL------ANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQA 130 (228)
T ss_dssp CSH------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cch------HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHh
Confidence 655 88999999999999999999999999999999999 5688888888764
No 25
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.67 E-value=1.1e-15 Score=111.51 Aligned_cols=110 Identities=15% Similarity=0.180 Sum_probs=101.4
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCc---------------HHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHH
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNN---------------EQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFV 65 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~---------------~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~ 65 (150)
.+|.+++..|+|++|+..|++|++++|++ ..++..+|.+ ..+| ++.+|+ ..+.+
T Consensus 152 ~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g--------~~~~A~--~~~~~ 221 (336)
T 1p5q_A 152 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQ--------AFSAAI--ESCNK 221 (336)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcC--------CHHHHH--HHHHH
Confidence 47999999999999999999999999999 6999999999 9999 778888 88888
Q ss_pred hhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHH
Q psy3020 66 QLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAA 145 (150)
Q Consensus 66 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~ 145 (150)
++.++|++ +.+|..+|.+++..|++++|+.+|+++++++|+++.++.+++.+
T Consensus 222 al~~~p~~----------------------------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 273 (336)
T 1p5q_A 222 ALELDSNN----------------------------EKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVC 273 (336)
T ss_dssp HHHHCTTC----------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHhCCCc----------------------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 88888853 77899999999999999999999999999999999999999999
Q ss_pred HHhc
Q psy3020 146 FAKA 149 (150)
Q Consensus 146 ~~~~ 149 (150)
+..+
T Consensus 274 ~~~~ 277 (336)
T 1p5q_A 274 QQRI 277 (336)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 26
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.65 E-value=5.2e-15 Score=90.60 Aligned_cols=108 Identities=20% Similarity=0.246 Sum_probs=96.1
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.++...|++++|+..|+++++.+|+++.++..+|.+ ..+| ++.++. ..+.+.+..+|++
T Consensus 9 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~--------~~~~A~--~~~~~~~~~~~~~------- 71 (118)
T 1elw_A 9 EKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKG--------DYQKAY--EDGCKTVDLKPDW------- 71 (118)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHHHCTTC-------
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhc--------cHHHHH--HHHHHHHHhCccc-------
Confidence 478999999999999999999999999999999999999 8888 667777 6676667666642
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHH
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFA 147 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~ 147 (150)
+..+..+|.++...|++++|++.|.++++++|+++.++.+++.+..
T Consensus 72 ---------------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 72 ---------------------GKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp ---------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred ---------------------HHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 6788999999999999999999999999999999999999888753
No 27
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.64 E-value=1.1e-15 Score=99.95 Aligned_cols=108 Identities=14% Similarity=0.106 Sum_probs=87.8
Q ss_pred HHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccC--CCCCchhhhhCChHHHHhhccCCCCCCCCCChHHH
Q psy3020 7 LSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDM--NRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYV 83 (150)
Q Consensus 7 ~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~--~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~ 83 (150)
..+.+.|++|++.|+++++++|++++++..+|.+ ..+++.+. ++...+.+|+ ..+.+++.++|+.
T Consensus 12 ~~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi--~~le~AL~ldP~~---------- 79 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAI--TKFEEALLIDPKK---------- 79 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH--HHHHHHHHHCTTC----------
T ss_pred HHHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHH--HHHHHHHHhCcCc----------
Confidence 4567899999999999999999999999999999 88875420 0001245777 7788888888864
Q ss_pred HHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHhhcCCCcchhhcHHH
Q psy3020 84 QMIKEIQKDPSLMTLEAKISLLKDKGNAALQAN-----------NFKEAIEAYSEAIKLDGTNHILFSNRSA 144 (150)
Q Consensus 84 ~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~-----------~~~~A~~~~~~al~~~p~~~~~~~n~a~ 144 (150)
..+|+++|+++..+| ++++|+++|++|++++|++...+.++..
T Consensus 80 ------------------~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~ 133 (158)
T 1zu2_A 80 ------------------DEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEM 133 (158)
T ss_dssp ------------------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ------------------HHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 788999999999875 8999999999999999999877666544
No 28
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.64 E-value=7.7e-15 Score=90.58 Aligned_cols=110 Identities=28% Similarity=0.373 Sum_probs=96.9
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.++...|++++|++.|+++++.+|++..++..++.+ ...| .+.+++ ..+.+.+...|++
T Consensus 14 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~--------~~~~A~--~~~~~~~~~~~~~------- 76 (125)
T 1na0_A 14 NLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQG--------DYDEAI--EYYQKALELDPNN------- 76 (125)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC-------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhC--------CHHHHH--HHHHHHHHhCCcc-------
Confidence 478999999999999999999999999999999999999 8888 666666 5666566555532
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+..+..+|.++...|++++|+..|.++++++|+++.++.++|.++..+
T Consensus 77 ---------------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 124 (125)
T 1na0_A 77 ---------------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQ 124 (125)
T ss_dssp ---------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred ---------------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhc
Confidence 667889999999999999999999999999999999999999998765
No 29
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.63 E-value=2.2e-15 Score=99.99 Aligned_cols=131 Identities=13% Similarity=0.031 Sum_probs=102.7
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCC-
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSD- 79 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~- 79 (150)
.+|..+...|++++|+..|+++++++|+++.++..++.+ ...| ++.+|+ ..+.+.+..+| +..+..-
T Consensus 11 ~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g--------~~~~A~--~~~~~a~~~~p-~~~~~~~~ 79 (176)
T 2r5s_A 11 KQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETK--------QFELAQ--ELLATIPLEYQ-DNSYKSLI 79 (176)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTT--------CHHHHH--HHHTTCCGGGC-CHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCC--------CHHHHH--HHHHHhhhccC-ChHHHHHH
Confidence 468899999999999999999999999999999999999 9999 666777 66766777777 4322100
Q ss_pred ------------hHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCC--cchhhcHHHH
Q psy3020 80 ------------PSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTN--HILFSNRSAA 145 (150)
Q Consensus 80 ------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~n~a~~ 145 (150)
......-..+..+|.. +..+..+|.++...|++++|+..|.++++++|+. +.++.++|.+
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~al~~~P~~------~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~ 153 (176)
T 2r5s_A 80 AKLELHQQAAESPELKRLEQELAANPDN------FELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDI 153 (176)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHSTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHH
T ss_pred HHHHHHhhcccchHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHH
Confidence 0000011113334444 8999999999999999999999999999999986 5599999999
Q ss_pred HHhc
Q psy3020 146 FAKA 149 (150)
Q Consensus 146 ~~~~ 149 (150)
+..+
T Consensus 154 ~~~~ 157 (176)
T 2r5s_A 154 LSAL 157 (176)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8765
No 30
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.63 E-value=6.9e-15 Score=99.19 Aligned_cols=110 Identities=16% Similarity=0.154 Sum_probs=98.8
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcH----------------HHHHHHHHH-HhhhhccCCCCCchhhhhCChHHH
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNE----------------QMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIF 64 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~----------------~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~ 64 (150)
.+|.+++..|+|++|+..|++++++.|+++ .++..+|.+ ..+| ++.+|+ ..+.
T Consensus 43 ~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~--------~~~~A~--~~~~ 112 (198)
T 2fbn_A 43 EEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNK--------DYPKAI--DHAS 112 (198)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhc--------CHHHHH--HHHH
Confidence 478999999999999999999999999987 899999999 8888 677887 7777
Q ss_pred HhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHH
Q psy3020 65 VQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSA 144 (150)
Q Consensus 65 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~ 144 (150)
+++.++|++ +.++..+|.+++..|++++|+++|.++++++|+++.++.+++.
T Consensus 113 ~al~~~p~~----------------------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 164 (198)
T 2fbn_A 113 KVLKIDKNN----------------------------VKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYEL 164 (198)
T ss_dssp HHHHHSTTC----------------------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHhCccc----------------------------HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence 777777743 6789999999999999999999999999999999999999999
Q ss_pred HHHhc
Q psy3020 145 AFAKA 149 (150)
Q Consensus 145 ~~~~~ 149 (150)
++..+
T Consensus 165 ~~~~~ 169 (198)
T 2fbn_A 165 CVNKL 169 (198)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98653
No 31
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.63 E-value=6.7e-15 Score=93.13 Aligned_cols=107 Identities=16% Similarity=0.105 Sum_probs=93.0
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.+++..|++++|+..|+++++++|+++.++..+|.+ ..+| ++.+|+ ..+.+++.++|++
T Consensus 14 ~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~--------~~~~A~--~~~~~al~~~p~~------- 76 (137)
T 3q49_B 14 EQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQ--------QPEQAL--ADCRRALELDGQS------- 76 (137)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC-------
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhc--------CHHHHH--HHHHHHHHhCchh-------
Confidence 579999999999999999999999999999999999999 9999 667777 7777777777753
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCC-----CcchhhcHHHHH
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGT-----NHILFSNRSAAF 146 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~n~a~~~ 146 (150)
+.+|..+|.++...|++++|+.+|.++++++|+ +......+..+.
T Consensus 77 ---------------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~ 126 (137)
T 3q49_B 77 ---------------------VKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAK 126 (137)
T ss_dssp ---------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHH
T ss_pred ---------------------HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHH
Confidence 778999999999999999999999999999999 555555444443
No 32
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.62 E-value=4.4e-15 Score=112.53 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=97.4
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCc---------------HHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHH
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNN---------------EQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFV 65 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~---------------~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~ 65 (150)
.+|.+++..|+|++|+..|++||+++|++ ..++..+|.+ ..+| ++.+|+ ..+.+
T Consensus 273 ~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g--------~~~~A~--~~~~~ 342 (457)
T 1kt0_A 273 EKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLR--------EYTKAV--ECCDK 342 (457)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhc--------CHHHHH--HHHHH
Confidence 47899999999999999999999999998 7899999999 9999 778888 88888
Q ss_pred hhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHH
Q psy3020 66 QLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAA 145 (150)
Q Consensus 66 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~ 145 (150)
++.++|++ +.+|..+|.+++..|++++|+.+|+++++++|++..++.+++.+
T Consensus 343 al~~~p~~----------------------------~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 394 (457)
T 1kt0_A 343 ALGLDSAN----------------------------EKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMC 394 (457)
T ss_dssp HHHHSTTC----------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHH
T ss_pred HHhcCCcc----------------------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 88888864 77899999999999999999999999999999999999999999
Q ss_pred HHhc
Q psy3020 146 FAKA 149 (150)
Q Consensus 146 ~~~~ 149 (150)
+..+
T Consensus 395 ~~~~ 398 (457)
T 1kt0_A 395 QKKA 398 (457)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8754
No 33
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.62 E-value=1.1e-14 Score=106.00 Aligned_cols=63 Identities=16% Similarity=0.095 Sum_probs=50.5
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTK 74 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~ 74 (150)
.+|.++...|++++|+..|+++++++|+++.++..++.+ ..+| ++.+|+ ..+.+.+..+|+..
T Consensus 104 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g--------~~~~A~--~~~~~al~~~p~~~ 167 (365)
T 4eqf_A 104 FLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTS--------HQQDAC--EALKNWIKQNPKYK 167 (365)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccc--------cHHHHH--HHHHHHHHhCccch
Confidence 578889999999999999999999999999999999888 8888 556666 66666666666543
No 34
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.61 E-value=8e-15 Score=102.45 Aligned_cols=130 Identities=14% Similarity=0.102 Sum_probs=99.7
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCC--
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLS-- 78 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~-- 78 (150)
..|.++...|++++|+..|+++++++|+++.++..++.+ ..+| ++.+|+ ..+.+++. .|.+.....
T Consensus 8 ~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~--------~~~~A~--~~~~~a~~-~~~~~~~~~~~ 76 (272)
T 3u4t_A 8 RYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELA--------KYDLAQ--KDIETYFS-KVNATKAKSAD 76 (272)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTT--------CHHHHH--HHHHHHHT-TSCTTTCCHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHh--------hHHHHH--HHHHHHHh-ccCchhHHHHH
Confidence 478999999999999999999999999999999999999 9999 667777 77777777 444333210
Q ss_pred ----------ChHHHHHH----HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHH-
Q psy3020 79 ----------DPSYVQMI----KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRS- 143 (150)
Q Consensus 79 ----------~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a- 143 (150)
...+...+ ..+..+|.. +..|..+|.++...|++++|+++|+++++++|+++..++++|
T Consensus 77 ~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~ 150 (272)
T 3u4t_A 77 FEYYGKILMKKGQDSLAIQQYQAAVDRDTTR------LDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQ 150 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC------THHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhcCccc------HHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHH
Confidence 00111111 112333433 788888999999999999999999999999999999999999
Q ss_pred HHHHh
Q psy3020 144 AAFAK 148 (150)
Q Consensus 144 ~~~~~ 148 (150)
.+|..
T Consensus 151 ~~~~~ 155 (272)
T 3u4t_A 151 AYYYN 155 (272)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 77654
No 35
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.61 E-value=1.8e-14 Score=93.50 Aligned_cols=106 Identities=14% Similarity=0.200 Sum_probs=94.5
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.++...|++++|+..|+++++++|+++.++..+|.+ ..+| ++.+++ ..+.+++..+|++
T Consensus 18 ~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~--------~~~~A~--~~~~~a~~~~~~~------- 80 (166)
T 1a17_A 18 TQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTE--------CYGYAL--GDATRAIELDKKY------- 80 (166)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC-------
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCccc-------
Confidence 578999999999999999999999999999999999999 8888 667777 7777777777643
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHH
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAA 145 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~ 145 (150)
+..|..+|.++...|++++|+++|.++++++|+++..+.+++.+
T Consensus 81 ---------------------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~ 124 (166)
T 1a17_A 81 ---------------------IKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 124 (166)
T ss_dssp ---------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred ---------------------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 67889999999999999999999999999999999988666665
No 36
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.60 E-value=6.2e-15 Score=112.09 Aligned_cols=132 Identities=18% Similarity=0.128 Sum_probs=81.1
Q ss_pred hhhHHHHhhCCH-HHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCC---
Q psy3020 2 TTYSCLSYLGRY-KESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPF--- 76 (150)
Q Consensus 2 ~lg~~~~~~~~~-~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~--- 76 (150)
.+|.++...|++ ++|++.|+++++++|+++.++..+|.+ ..+| ++.+|+ ..+.+++.++|+...+
T Consensus 107 ~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g--------~~~~A~--~~~~~al~~~p~~~~~~~l 176 (474)
T 4abn_A 107 LKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKG--------DVTSAH--TCFSGALTHCKNKVSLQNL 176 (474)
T ss_dssp HHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHTTCCCHHHHHHH
T ss_pred HHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHhhCCCHHHHHHH
Confidence 467777777777 777777777777777777777777777 7777 556666 6666666666652110
Q ss_pred ----CCC---------hHHHHHHH----HHhcCcchhhhHHHhHHHHHHHHHHHHh--------cCHHHHHHHHHHHHhh
Q psy3020 77 ----LSD---------PSYVQMIK----EIQKDPSLMTLEAKISLLKDKGNAALQA--------NNFKEAIEAYSEAIKL 131 (150)
Q Consensus 77 ----~~~---------~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~g~~~~~~--------~~~~~A~~~~~~al~~ 131 (150)
... ..+..++. .+..+|.. +.+|..+|.++... |++++|+++|++++++
T Consensus 177 g~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 250 (474)
T 4abn_A 177 SMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLD------GRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKV 250 (474)
T ss_dssp HHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh
Confidence 111 11222211 12233333 56666666666666 6666666666666666
Q ss_pred cC---CCcchhhcHHHHHHhc
Q psy3020 132 DG---TNHILFSNRSAAFAKA 149 (150)
Q Consensus 132 ~p---~~~~~~~n~a~~~~~~ 149 (150)
+| +++.+|+++|.+|..+
T Consensus 251 ~p~~~~~~~~~~~lg~~~~~~ 271 (474)
T 4abn_A 251 DRKASSNPDLHLNRATLHKYE 271 (474)
T ss_dssp CGGGGGCHHHHHHHHHHHHHT
T ss_pred CCCcccCHHHHHHHHHHHHHc
Confidence 66 6666666666666553
No 37
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.60 E-value=1.5e-14 Score=101.33 Aligned_cols=113 Identities=8% Similarity=0.077 Sum_probs=101.4
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCc---HHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNN---EQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFL 77 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~---~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~ 77 (150)
.+|.+++..|+|++|+..|+++++.+|++ +.++..+|.+ ..+| ++.+|+ ..+.+.+...|++..
T Consensus 20 ~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~--------~~~~A~--~~~~~~l~~~p~~~~-- 87 (261)
T 3qky_A 20 ERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNK--------EYLLAA--SEYERFIQIYQIDPR-- 87 (261)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTCTT--
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhC--------cHHHHH--HHHHHHHHHCCCCch--
Confidence 57899999999999999999999999999 8999999999 9999 778888 888888888886532
Q ss_pred CChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHH--------hcCHHHHHHHHHHHHhhcCCCcchh----------
Q psy3020 78 SDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQ--------ANNFKEAIEAYSEAIKLDGTNHILF---------- 139 (150)
Q Consensus 78 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~--------~~~~~~A~~~~~~al~~~p~~~~~~---------- 139 (150)
. +.++..+|.+++. .|++++|+..|+++++.+|+++..+
T Consensus 88 -----------------~------~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~ 144 (261)
T 3qky_A 88 -----------------V------PQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELR 144 (261)
T ss_dssp -----------------H------HHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHH
T ss_pred -----------------h------HHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHH
Confidence 1 6789999999999 9999999999999999999998877
Q ss_pred -------hcHHHHHHhc
Q psy3020 140 -------SNRSAAFAKA 149 (150)
Q Consensus 140 -------~n~a~~~~~~ 149 (150)
+++|.+|.++
T Consensus 145 ~~~~~~~~~la~~~~~~ 161 (261)
T 3qky_A 145 AKLARKQYEAARLYERR 161 (261)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 8889998865
No 38
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.60 E-value=1e-14 Score=107.06 Aligned_cols=131 Identities=16% Similarity=0.154 Sum_probs=91.8
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCC--
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLS-- 78 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~-- 78 (150)
.+|.++...|++++|+..|+++++++|+++.++..++.+ ...| ++.+|+ ..+.+.+..+|+......
T Consensus 72 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g--------~~~~A~--~~~~~al~~~p~~~~~~~~l 141 (388)
T 1w3b_A 72 NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAG--------DMEGAV--QAYVSALQYNPDLYCVRSDL 141 (388)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHS--------CSSHHH--HHHHHHHHHCTTCTHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCCCcHHHHHHH
Confidence 478889999999999999999999999999999999888 8888 556666 677777778887654210
Q ss_pred ------ChHHHHHH----HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 79 ------DPSYVQMI----KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 79 ------~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
...+...+ ..+...|.. +.+|..+|.++...|++++|+..|+++++++|+++.+++++|.++..
T Consensus 142 ~~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 215 (388)
T 1w3b_A 142 GNLLKALGRLEEAKACYLKAIETQPNF------AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKE 215 (388)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHccCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 01111111 113334444 66777777777777777777777777777777777777777766654
No 39
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.59 E-value=1.8e-14 Score=102.80 Aligned_cols=132 Identities=13% Similarity=0.086 Sum_probs=106.0
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCC---
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFL--- 77 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~--- 77 (150)
.+|..+...|++++|+..|+++++++|+++.++..++.+ ...| ++.+|. ..+.+.+..+|+.....
T Consensus 122 ~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g--------~~~~A~--~~l~~~~~~~p~~~~~~~~~ 191 (287)
T 3qou_A 122 QQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALN--------RSEDAE--AVLXTIPLQDQDTRYQGLVA 191 (287)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTT--------CHHHHH--HHHTTSCGGGCSHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCC--------CHHHHH--HHHHhCchhhcchHHHHHHH
Confidence 478899999999999999999999999999999999999 9999 666777 67777777777433210
Q ss_pred ---------CChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCC--cchhhcHHHHH
Q psy3020 78 ---------SDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTN--HILFSNRSAAF 146 (150)
Q Consensus 78 ---------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~n~a~~~ 146 (150)
.........+.+..+|.. +.++..+|.++...|++++|+..|.++++.+|++ ..++.+++.++
T Consensus 192 ~~~l~~~~~~~~a~~~l~~al~~~P~~------~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~ 265 (287)
T 3qou_A 192 QIELLXQAADTPEIQQLQQQVAENPED------AALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEIL 265 (287)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHH
T ss_pred HHHHHhhcccCccHHHHHHHHhcCCcc------HHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHH
Confidence 000111112224556655 8999999999999999999999999999999998 88999999998
Q ss_pred Hhc
Q psy3020 147 AKA 149 (150)
Q Consensus 147 ~~~ 149 (150)
..+
T Consensus 266 ~~~ 268 (287)
T 3qou_A 266 AAL 268 (287)
T ss_dssp HHH
T ss_pred HHc
Confidence 764
No 40
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.59 E-value=4.7e-14 Score=102.37 Aligned_cols=133 Identities=14% Similarity=0.177 Sum_probs=74.8
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCC-
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSD- 79 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~- 79 (150)
.+|.++...|++++|+..|+++++++|+++.++..++.+ ...| .+.+|+ ..+.+.+...|+.......
T Consensus 103 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g--------~~~~A~--~~~~~~~~~~~~~~~~~~~~ 172 (368)
T 1fch_A 103 YLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNES--------LQRQAC--EILRDWLRYTPAYAHLVTPA 172 (368)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHTSTTTGGGCC--
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCcCcHHHHHHH
Confidence 467777777777777777777777777777777777777 6666 555565 5666666666665543310
Q ss_pred ----------------------hHHHHHH----HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q psy3020 80 ----------------------PSYVQMI----KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDG 133 (150)
Q Consensus 80 ----------------------~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p 133 (150)
..+...+ ..+...|.. ..+..+..+|.++...|++++|++.|+++++++|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~----~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 248 (368)
T 1fch_A 173 EEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTS----IDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRP 248 (368)
T ss_dssp -------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTS----CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCc----ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 0000111 112222320 0144555555555555555555555555555555
Q ss_pred CCcchhhcHHHHHHh
Q psy3020 134 TNHILFSNRSAAFAK 148 (150)
Q Consensus 134 ~~~~~~~n~a~~~~~ 148 (150)
+++.+++++|.++..
T Consensus 249 ~~~~~~~~l~~~~~~ 263 (368)
T 1fch_A 249 NDYLLWNKLGATLAN 263 (368)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 555555555555544
No 41
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=4.2e-14 Score=90.12 Aligned_cols=108 Identities=13% Similarity=0.168 Sum_probs=95.2
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCc---HHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNN---EQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFL 77 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~---~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~ 77 (150)
.+|.++...|++++|+..|+++++++|++ ..++..++.+ ..+| ++.+++ ..+.+.+..+|++
T Consensus 33 ~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~--------~~~~A~--~~~~~~~~~~~~~---- 98 (148)
T 2dba_A 33 KEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLE--------DYDKAE--TEASKAIEKDGGD---- 98 (148)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHTSCC----
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHc--------cHHHHH--HHHHHHHhhCccC----
Confidence 47899999999999999999999999998 8899999999 8888 667777 6776677666643
Q ss_pred CChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHH
Q psy3020 78 SDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFA 147 (150)
Q Consensus 78 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~ 147 (150)
+..+..+|.++...|++++|+.+|.++++++|+++.++..++.+.-
T Consensus 99 ------------------------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 144 (148)
T 2dba_A 99 ------------------------VKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNISG 144 (148)
T ss_dssp ------------------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHC
T ss_pred ------------------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 6788999999999999999999999999999999999988877653
No 42
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.59 E-value=1.7e-14 Score=99.29 Aligned_cols=136 Identities=4% Similarity=-0.041 Sum_probs=95.2
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHH---HHHHHHHH-HhhhhccC----------CCCCchhhhhCChHHHHhh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQ---MKEAIKDV-RNQEMNDM----------NRGDPFANLFSDPNIFVQL 67 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~---a~~~l~~~-~~~g~~~~----------~~~~~~~~a~~~~~~~~~l 67 (150)
.+|.+|...|++++|+..|+++++++|+++. ++..+|.+ ..++.... .-...+.+|+ ..+.+.+
T Consensus 46 ~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~--~~~~~~l 123 (225)
T 2yhc_A 46 DLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAF--SDFSKLV 123 (225)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHH--HHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHH--HHHHHHH
Confidence 4688888888888888888888888888764 66777766 44320000 0001566777 7788888
Q ss_pred ccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCc---chhhcHHH
Q psy3020 68 QLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNH---ILFSNRSA 144 (150)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~n~a~ 144 (150)
...|++.... .....+..+... .......+|.+++..|++++|+..|+++++.+|+++ .+++++|.
T Consensus 124 ~~~P~~~~a~---~a~~~l~~~~~~--------~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~ 192 (225)
T 2yhc_A 124 RGYPNSQYTT---DATKRLVFLKDR--------LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMEN 192 (225)
T ss_dssp TTCTTCTTHH---HHHHHHHHHHHH--------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHH
T ss_pred HHCcCChhHH---HHHHHHHHHHHH--------HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHH
Confidence 8888876532 122222222111 144557889999999999999999999999999986 67999999
Q ss_pred HHHhcC
Q psy3020 145 AFAKAI 150 (150)
Q Consensus 145 ~~~~~~ 150 (150)
+|.+++
T Consensus 193 ~~~~~g 198 (225)
T 2yhc_A 193 AYRQMQ 198 (225)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 998763
No 43
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.58 E-value=3.1e-15 Score=118.29 Aligned_cols=131 Identities=8% Similarity=-0.080 Sum_probs=108.7
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCC-
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSD- 79 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~- 79 (150)
.+|.++...|++++|+..|+++++++|++..++..+|.+ ..+| ++.+|+ ..+.+++.++|++...+..
T Consensus 438 ~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g--------~~~~A~--~~~~~al~l~P~~~~~~~~l 507 (681)
T 2pzi_A 438 MEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTG--------DYDSAT--KHFTEVLDTFPGELAPKLAL 507 (681)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHHHSTTCSHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCCCChHHHHHH
Confidence 478999999999999999999999999999999999999 9999 778888 8999999999988763211
Q ss_pred hHHHH---------H-HHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 80 PSYVQ---------M-IKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 80 ~~~~~---------~-~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
..... . -+.+..+|.. +.+|.++|.++...|++++|+++|+++++++|+++.+++++|.+++.
T Consensus 508 g~~~~~~g~~~~~~~~~~al~~~P~~------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~~~ 580 (681)
T 2pzi_A 508 AATAELAGNTDEHKFYQTVWSTNDGV------ISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTLLS 580 (681)
T ss_dssp HHHHHHHTCCCTTCHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHTC-
T ss_pred HHHHHHcCChHHHHHHHHHHHhCCch------HHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHHHc
Confidence 00000 0 1113334444 88999999999999999999999999999999999999999999864
No 44
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.58 E-value=2.5e-15 Score=118.82 Aligned_cols=127 Identities=12% Similarity=0.047 Sum_probs=86.7
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCC--
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLS-- 78 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~-- 78 (150)
.+|.+|...|++++|+.+|++|++++|+++.++..+|.+ ..+|++ .+ + ..+.+++.++|++...+.
T Consensus 472 ~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~--------~~-~--~~~~~al~~~P~~~~a~~~l 540 (681)
T 2pzi_A 472 YRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNT--------DE-H--KFYQTVWSTNDGVISAAFGL 540 (681)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCC--------CT-T--CHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCh--------HH-H--HHHHHHHHhCCchHHHHHHH
Confidence 579999999999999999999999999999999999999 999944 44 5 677888888998765321
Q ss_pred ------ChHHHHHHHHH----hcCcchhhhHHHhHHHHHHHHHHHHhcCHHHH-HHHHHHHH----hhcCCCcchhhcHH
Q psy3020 79 ------DPSYVQMIKEI----QKDPSLMTLEAKISLLKDKGNAALQANNFKEA-IEAYSEAI----KLDGTNHILFSNRS 143 (150)
Q Consensus 79 ------~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A-~~~~~~al----~~~p~~~~~~~n~a 143 (150)
...+..++..+ ..+|.. ..++.++|.+++..++.+++ .+.+.+|+ .+.++++.....++
T Consensus 541 g~~~~~~g~~~~A~~~~~~al~l~P~~------~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~l~~~~~~~~~~~~l~~ 614 (681)
T 2pzi_A 541 ARARSAEGDRVGAVRTLDEVPPTSRHF------TTARLTSAVTLLSGRSTSEVTEEQIRDAARRVEALPPTEPRVLQIRA 614 (681)
T ss_dssp HHHHHHTTCHHHHHHHHHTSCTTSTTH------HHHHHHHHHHTC-------CCHHHHHHHHHHHHTSCTTSTTHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHhhcccCccc------HHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHhhCCCCcHHHHHHHH
Confidence 11223333332 234544 88999999999887775544 45555554 45555666554444
Q ss_pred HH
Q psy3020 144 AA 145 (150)
Q Consensus 144 ~~ 145 (150)
.+
T Consensus 615 ~l 616 (681)
T 2pzi_A 615 LV 616 (681)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 45
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.58 E-value=2.3e-14 Score=100.37 Aligned_cols=127 Identities=10% Similarity=0.000 Sum_probs=102.1
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCC---cHHHHHHHHHH-Hh--------hhhccCCCCCchhhhhCChHHHHhhcc
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPN---NEQMKEAIKDV-RN--------QEMNDMNRGDPFANLFSDPNIFVQLQL 69 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~---~~~a~~~l~~~-~~--------~g~~~~~~~~~~~~a~~~~~~~~~l~~ 69 (150)
.+|.+|...|++++|+..|++++++.|+ .+.++..+|.+ .. +| ++.+|+ ..+.+.+..
T Consensus 57 ~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~--------~~~~A~--~~~~~~l~~ 126 (261)
T 3qky_A 57 YLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQT--------DTRKAI--EAFQLFIDR 126 (261)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCH--------HHHHHH--HHHHHHHHH
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccch--------hHHHHH--HHHHHHHHH
Confidence 5899999999999999999999999885 46788999999 77 77 677888 888889999
Q ss_pred CCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCC---cchhhcHHHHH
Q psy3020 70 DPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTN---HILFSNRSAAF 146 (150)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~n~a~~~ 146 (150)
.|++.... .....+..+.. .....+..+|.+++..|++++|+..|+++++.+|++ +.+++++|.+|
T Consensus 127 ~p~~~~~~---~a~~~~~~~~~--------~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~ 195 (261)
T 3qky_A 127 YPNHELVD---DATQKIRELRA--------KLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAY 195 (261)
T ss_dssp CTTCTTHH---HHHHHHHHHHH--------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHH
T ss_pred CcCchhHH---HHHHHHHHHHH--------HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHH
Confidence 99876532 12222222211 116678999999999999999999999999999995 46899999999
Q ss_pred Hhc
Q psy3020 147 AKA 149 (150)
Q Consensus 147 ~~~ 149 (150)
..+
T Consensus 196 ~~~ 198 (261)
T 3qky_A 196 IAY 198 (261)
T ss_dssp HHH
T ss_pred HHh
Confidence 754
No 46
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.58 E-value=2.1e-14 Score=105.40 Aligned_cols=132 Identities=17% Similarity=0.215 Sum_probs=109.6
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCC--
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLS-- 78 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~-- 78 (150)
.+|.++...|++++|++.|+++++++|+++.++..++.+ ...| ++.+|+ ..+.+.+..+|++...+.
T Consensus 242 ~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g--------~~~~A~--~~~~~al~~~p~~~~~~~~l 311 (388)
T 1w3b_A 242 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKG--------SVAEAE--DCYNTALRLCPTHADSLNNL 311 (388)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHS--------CHHHHH--HHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHhhCcccHHHHHHH
Confidence 579999999999999999999999999999999999999 8999 677888 888888888887764311
Q ss_pred ------ChHHHHHH----HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 79 ------DPSYVQMI----KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 79 ------~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
...+...+ +.+...|.. +.++..+|.++...|++++|++.|+++++++|+++.+|+++|.++.+
T Consensus 312 ~~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~a~~~lg~~~~~ 385 (388)
T 1w3b_A 312 ANIKREQGNIEEAVRLYRKALEVFPEF------AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKE 385 (388)
T ss_dssp HHHHHTTTCHHHHHHHHHHHTTSCTTC------HHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHhHHHHHHH
Confidence 11111221 113344544 78999999999999999999999999999999999999999999887
Q ss_pred c
Q psy3020 149 A 149 (150)
Q Consensus 149 ~ 149 (150)
+
T Consensus 386 ~ 386 (388)
T 1w3b_A 386 M 386 (388)
T ss_dssp T
T ss_pred c
Confidence 5
No 47
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.58 E-value=1.1e-14 Score=100.63 Aligned_cols=61 Identities=11% Similarity=0.085 Sum_probs=53.0
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCc-------HHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNN-------EQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPR 72 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~-------~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~ 72 (150)
.+|.++...|++++|+..|+++++++|++ +.++..++.+ ..+| ++.+|+ ..+.+.+.+.|+
T Consensus 43 ~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------~~~~A~--~~~~~a~~~~~~ 111 (258)
T 3uq3_A 43 NRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLG--------DLKKTI--EYYQKSLTEHRT 111 (258)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCCC
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcc--------cHHHHH--HHHHHHHhcCch
Confidence 57999999999999999999999999987 7899999999 8888 667777 777777776665
No 48
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.57 E-value=1.4e-14 Score=98.76 Aligned_cols=122 Identities=16% Similarity=0.063 Sum_probs=94.3
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCC-h
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSD-P 80 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~-~ 80 (150)
+|.+|...|++++|+..|+++|+++|+++.++..+|.+ ..+| ++.+|+ ..+.+++.++|++...+.. .
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g--------~~~~A~--~~~~~al~~~P~~~~a~~~lg 129 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRG--------QEKDAL--RMYEKILQLEADNLAANIFLG 129 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHcCCCCHHHHHHHH
Confidence 89999999999999999999999999999999999999 9999 778888 8999999999998764321 0
Q ss_pred HHH--H-------HHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcc
Q psy3020 81 SYV--Q-------MIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHI 137 (150)
Q Consensus 81 ~~~--~-------~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~ 137 (150)
.+. . ......+... .++...++..+|..+...|+|++|+.+|+++++++|++..
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~~ 192 (208)
T 3urz_A 130 NYYYLTAEQEKKKLETDYKKLSS---PTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTEA 192 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHC---C---CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHhC---CCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHHH
Confidence 000 0 0000000000 0012346788999999999999999999999999997543
No 49
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.57 E-value=7.7e-14 Score=91.53 Aligned_cols=132 Identities=13% Similarity=0.106 Sum_probs=104.0
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCC-
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSD- 79 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~- 79 (150)
.+|.++...|++++|+..|+++++.+|+++.++..++.+ ...| ++.++. ..+.+.+...|+.......
T Consensus 13 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~A~--~~~~~~~~~~~~~~~~~~~~ 82 (186)
T 3as5_A 13 DKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTG--------AVDRGT--ELLERSLADAPDNVKVATVL 82 (186)
T ss_dssp HHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHhcCCCCHHHHHHH
Confidence 478899999999999999999999999999999999999 8888 667777 7777778888876542100
Q ss_pred -------hHHHH---HHH-HHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 80 -------PSYVQ---MIK-EIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 80 -------~~~~~---~~~-~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
..+.. .+. .+...|.. +..+..+|.++...|++++|+++|+++++.+|+++.+++++|.++..
T Consensus 83 a~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 156 (186)
T 3as5_A 83 GLTYVQVQKYDLAVPLLIKVAEANPIN------FNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQ 156 (186)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHhcCcHh------HHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHH
Confidence 00111 111 12223333 78899999999999999999999999999999999999999999876
Q ss_pred c
Q psy3020 149 A 149 (150)
Q Consensus 149 ~ 149 (150)
+
T Consensus 157 ~ 157 (186)
T 3as5_A 157 M 157 (186)
T ss_dssp T
T ss_pred c
Confidence 5
No 50
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.57 E-value=1.8e-14 Score=93.51 Aligned_cols=94 Identities=10% Similarity=0.035 Sum_probs=85.3
Q ss_pred HHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchh
Q psy3020 18 STYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLM 96 (150)
Q Consensus 18 ~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 96 (150)
..|+++++++|++..++..+|.+ ...| ++.+|+ ..+.+++..+|++
T Consensus 8 ~~~~~al~~~p~~~~~~~~~g~~~~~~g--------~~~~A~--~~~~~al~~~p~~----------------------- 54 (148)
T 2vgx_A 8 GTIAMLNEISSDTLEQLYSLAFNQYQSG--------XYEDAH--XVFQALCVLDHYD----------------------- 54 (148)
T ss_dssp CSHHHHTTCCHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC-----------------------
T ss_pred hhHHHHHcCCHhhHHHHHHHHHHHHHcC--------ChHHHH--HHHHHHHHcCccc-----------------------
Confidence 56899999999999999999999 9999 777888 7777777777754
Q ss_pred hhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 97 TLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+..|..+|.++...|++++|+++|+++++++|+++.+++++|.+|..+
T Consensus 55 -----~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~ 102 (148)
T 2vgx_A 55 -----SRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQX 102 (148)
T ss_dssp -----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHT
T ss_pred -----HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHc
Confidence 778999999999999999999999999999999999999999999875
No 51
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.57 E-value=1.8e-14 Score=95.59 Aligned_cols=125 Identities=13% Similarity=0.068 Sum_probs=98.4
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCC---
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFL--- 77 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~--- 77 (150)
.+|.+|...|++++|+..+.+++..+|+++.++..++.+ ...+ ++..+. ..+.+++..+|++....
T Consensus 44 ~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~a~--~~~~~a~~~~~~~~~~~~~l 113 (184)
T 3vtx_A 44 KLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMID--------EKQAAI--DALQRAIALNTVYADAYYKL 113 (184)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCccchHHHHHH
Confidence 579999999999999999999999999999999999998 8888 566666 77777888888876531
Q ss_pred -----CChHHHHHH----HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHH
Q psy3020 78 -----SDPSYVQMI----KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSA 144 (150)
Q Consensus 78 -----~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~ 144 (150)
....+..++ +.+..+|.. +.+|..+|.++...|++++|+++|++|++++|+++. +++|.
T Consensus 114 g~~~~~~g~~~~A~~~~~~~l~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~a~--~~lal 181 (184)
T 3vtx_A 114 GLVYDSMGEHDKAIEAYEKTISIKPGF------IRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKKAK--YELAL 181 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHHHH--HCSCC
T ss_pred HHHHHHhCCchhHHHHHHHHHHhcchh------hhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccCHH--HHHHh
Confidence 111122222 224445655 899999999999999999999999999999998753 45543
No 52
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.57 E-value=1.4e-14 Score=91.65 Aligned_cols=91 Identities=12% Similarity=0.191 Sum_probs=80.6
Q ss_pred HHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhH
Q psy3020 21 EEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLE 99 (150)
Q Consensus 21 ~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 99 (150)
.++..+||+.++++..+|.. ...| ++.+|+ ..+.+++.++|++
T Consensus 3 ar~a~inP~~a~~~~~~G~~~~~~g--------~~~~A~--~~~~~al~~~p~~-------------------------- 46 (126)
T 4gco_A 3 ARLAYINPELAQEEKNKGNEYFKKG--------DYPTAM--RHYNEAVKRDPEN-------------------------- 46 (126)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC--------------------------
T ss_pred hHHHHHCHHHHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCCCC--------------------------
Confidence 35667999999999999999 9999 778888 8888888888854
Q ss_pred HHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 100 AKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+..|..+|.+++..|++++|++.|+++++++|+++.+|+++|.+|..+
T Consensus 47 --~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~ 94 (126)
T 4gco_A 47 --AILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAM 94 (126)
T ss_dssp --HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred --HHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHC
Confidence 778999999999999999999999999999999999999999999876
No 53
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.56 E-value=2e-14 Score=109.56 Aligned_cols=106 Identities=14% Similarity=0.200 Sum_probs=98.2
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.++...|++++|++.|++|++++|+++.++..+|.+ ..+| ++.+|+ ..+.+++.++|++
T Consensus 11 ~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g--------~~~~A~--~~~~~al~l~p~~------- 73 (477)
T 1wao_1 11 TQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTE--------CYGYAL--GDATRAIELDKKY------- 73 (477)
T ss_dssp SSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHSCTTC-------
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhc--------CHHHHH--HHHHHHHHhCCCC-------
Confidence 468889999999999999999999999999999999999 9999 778888 8888888887754
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHH
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAA 145 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~ 145 (150)
+.+|..+|.++...|++++|++.|+++++++|+++.++.+++.+
T Consensus 74 ---------------------~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~ 117 (477)
T 1wao_1 74 ---------------------IKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 117 (477)
T ss_dssp ---------------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHH
T ss_pred ---------------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999988
No 54
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.56 E-value=4.4e-14 Score=97.49 Aligned_cols=109 Identities=17% Similarity=0.204 Sum_probs=73.2
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhc--------------------------cCCCcHHHHHHHHHH-HhhhhccCCCCCch
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLK--------------------------LDPNNEQMKEAIKDV-RNQEMNDMNRGDPF 54 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~--------------------------~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~ 54 (150)
.+|.++...|++++|+..|+++++ .+|+++.++..+|.+ ...| ++
T Consensus 84 ~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 155 (258)
T 3uq3_A 84 RIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKS--------DW 155 (258)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTT--------CH
T ss_pred HHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhc--------CH
Confidence 578899999999999999999999 667777778888887 7777 56
Q ss_pred hhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCC
Q psy3020 55 ANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGT 134 (150)
Q Consensus 55 ~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 134 (150)
.+|+ ..+.+.+..+|++ +..+..+|.++...|++++|+++|+++++++|+
T Consensus 156 ~~A~--~~~~~a~~~~~~~----------------------------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~ 205 (258)
T 3uq3_A 156 PNAV--KAYTEMIKRAPED----------------------------ARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN 205 (258)
T ss_dssp HHHH--HHHHHHHHHCTTC----------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHH--HHHHHHHhcCccc----------------------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHH
Confidence 6666 6676677766654 344445555555555555555555555555555
Q ss_pred CcchhhcHHHHHHh
Q psy3020 135 NHILFSNRSAAFAK 148 (150)
Q Consensus 135 ~~~~~~n~a~~~~~ 148 (150)
++.+++++|.+|..
T Consensus 206 ~~~~~~~l~~~~~~ 219 (258)
T 3uq3_A 206 FVRAYIRKATAQIA 219 (258)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 55555555555443
No 55
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.56 E-value=2e-14 Score=104.64 Aligned_cols=109 Identities=14% Similarity=0.133 Sum_probs=91.5
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCC--cHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCC
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPN--NEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSD 79 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~--~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~ 79 (150)
+|.++...|++++|+..|+++++++|+ ++.++..+|.+ ...| ++.+|+ ..+.+++..+|++
T Consensus 183 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g--------~~~~A~--~~~~~al~~~p~~------ 246 (365)
T 4eqf_A 183 MSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSG--------EFNRAI--DAFNAALTVRPED------ 246 (365)
T ss_dssp ------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHHHCTTC------
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCC--------CHHHHH--HHHHHHHHhCCCC------
Confidence 588999999999999999999999999 99999999999 8889 677787 7777777777753
Q ss_pred hHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 80 PSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 80 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+..|..+|.++...|++++|+++|+++++++|+++.+++++|.+|..+
T Consensus 247 ----------------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 294 (365)
T 4eqf_A 247 ----------------------YSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINL 294 (365)
T ss_dssp ----------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred ----------------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHC
Confidence 667889999999999999999999999999999999999999998765
No 56
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.56 E-value=5.1e-14 Score=98.34 Aligned_cols=131 Identities=13% Similarity=0.104 Sum_probs=91.6
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcH----HHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNE----QMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPF 76 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~----~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~ 76 (150)
.+|.++...|++++|+..|+++++ .|+++ .++..+|.+ ..+| ++.+|+ ..+.+++..+|+....
T Consensus 42 ~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~~--------~~~~A~--~~~~~a~~~~~~~~~~ 110 (272)
T 3u4t_A 42 RRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKKG--------QDSLAI--QQYQAAVDRDTTRLDM 110 (272)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHSTTCTHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHcc--------cHHHHH--HHHHHHHhcCcccHHH
Confidence 467777777777777777777777 44333 346777777 7777 566666 6777777777766542
Q ss_pred CC--------ChHHHHHHHH----HhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHH
Q psy3020 77 LS--------DPSYVQMIKE----IQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSA 144 (150)
Q Consensus 77 ~~--------~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~ 144 (150)
+. ...+...+.. +...|.. +..|..+|...+..+++++|+++|+++++++|+++.+++++|.
T Consensus 111 ~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~ 184 (272)
T 3u4t_A 111 YGQIGSYFYNKGNFPLAIQYMEKQIRPTTTD------PKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIYIGYLWRAR 184 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHGGGCCSSCCC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHhhcCCCc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 11 0112222222 2223433 8889999966667779999999999999999999999999999
Q ss_pred HHHhc
Q psy3020 145 AFAKA 149 (150)
Q Consensus 145 ~~~~~ 149 (150)
++..+
T Consensus 185 ~~~~~ 189 (272)
T 3u4t_A 185 ANAAQ 189 (272)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 98764
No 57
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.56 E-value=5.6e-14 Score=108.55 Aligned_cols=110 Identities=15% Similarity=0.078 Sum_probs=86.9
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.++...|++++|++.|+++++++|++..++..+|.+ ..+| ++.+|. ..+.+++..+|++
T Consensus 28 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g--------~~~~A~--~~~~~al~~~p~~------- 90 (568)
T 2vsy_A 28 MLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQ--------RHAEAA--VLLQQASDAAPEH------- 90 (568)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC-------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCC--------CHHHHH--HHHHHHHhcCCCC-------
Confidence 478888888888888888888888888888888888888 8888 666777 6777777777754
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+..+..+|.++...|++++|++.|+++++++|+++.++.++|.++..+
T Consensus 91 ---------------------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 91 ---------------------PGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRL 138 (568)
T ss_dssp ---------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred ---------------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 566777777777777888888888888877777777777777777654
No 58
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.56 E-value=1.2e-13 Score=85.88 Aligned_cols=110 Identities=26% Similarity=0.393 Sum_probs=89.1
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.++...|++++|+..|+++++.+|++..++..++.+ ...| .+.++. ..+.+.+...|+.
T Consensus 6 ~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~--------~~~~A~--~~~~~~~~~~~~~------- 68 (136)
T 2fo7_A 6 NLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQG--------DYDEAI--EYYQKALELDPRS------- 68 (136)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHHHCTTC-------
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhc--------CHHHHH--HHHHHHHHHCCCc-------
Confidence 478999999999999999999999999999999999999 8888 556666 5555555555532
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+..+..+|.++...|++++|++.+.++++.+|+++..++++|.++..+
T Consensus 69 ---------------------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~ 116 (136)
T 2fo7_A 69 ---------------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQ 116 (136)
T ss_dssp ---------------------HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT
T ss_pred ---------------------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHH
Confidence 556777788888888888888888888888888888888888877654
No 59
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.55 E-value=9.7e-14 Score=86.83 Aligned_cols=108 Identities=11% Similarity=-0.004 Sum_probs=93.5
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcH---HHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNE---QMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFL 77 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~---~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~ 77 (150)
.+|.++...|++++|+..|+++++.+|+++ .++..+|.+ ...| ++.+|+ ..+.+.+..+|++..
T Consensus 7 ~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~--------~~~~A~--~~~~~~~~~~p~~~~-- 74 (129)
T 2xev_A 7 NVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATR--------NFQLAE--AQFRDLVSRYPTHDK-- 74 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTSTT--
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhc--------cHHHHH--HHHHHHHHHCCCCcc--
Confidence 578999999999999999999999999998 799999999 9999 777888 778788888886532
Q ss_pred CChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHH
Q psy3020 78 SDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSA 144 (150)
Q Consensus 78 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~ 144 (150)
. +.++..+|.+++..|++++|+..|++++..+|+++....-+..
T Consensus 75 -----------------~------~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~ 118 (129)
T 2xev_A 75 -----------------A------AGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQER 118 (129)
T ss_dssp -----------------H------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHH
T ss_pred -----------------c------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHH
Confidence 0 5778999999999999999999999999999998876654443
No 60
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.55 E-value=5.1e-14 Score=105.61 Aligned_cols=133 Identities=13% Similarity=0.186 Sum_probs=103.4
Q ss_pred hhHHHHhh--CCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCC-
Q psy3020 3 TYSCLSYL--GRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLS- 78 (150)
Q Consensus 3 lg~~~~~~--~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~- 78 (150)
+|.++... ++|++|+++|++|++++|++++++..++.+ ..++... ...+++ ..+.+++.++|++.....
T Consensus 142 ~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~-----~~~~al--~~~~~al~l~p~~~~~~~~ 214 (472)
T 4g1t_A 142 EGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWP-----PSQNAI--DPLRQAIRLNPDNQYLKVL 214 (472)
T ss_dssp HHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSC-----CCCCTH--HHHHHHHHHCSSCHHHHHH
T ss_pred HHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCch-----HHHHHH--HHHHHHhhcCCcchHHHHH
Confidence 35555544 579999999999999999999999999988 7777554 556677 788888999998754210
Q ss_pred -------------C-hHHHHHHH-HHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHH
Q psy3020 79 -------------D-PSYVQMIK-EIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRS 143 (150)
Q Consensus 79 -------------~-~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a 143 (150)
+ ......++ .+..+|.. +.++..+|.++...|++++|++.|.++++++|+++.+++++|
T Consensus 215 l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg 288 (472)
T 4g1t_A 215 LALKLHKMREEGEEEGEGEKLVEEALEKAPGV------TDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIG 288 (472)
T ss_dssp HHHHHHHCC------CHHHHHHHHHHHHCSSC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHhCccH------HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHH
Confidence 0 01111111 13344544 889999999999999999999999999999999999999999
Q ss_pred HHHHh
Q psy3020 144 AAFAK 148 (150)
Q Consensus 144 ~~~~~ 148 (150)
.+|..
T Consensus 289 ~~y~~ 293 (472)
T 4g1t_A 289 CCYRA 293 (472)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99864
No 61
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.55 E-value=5.4e-14 Score=102.03 Aligned_cols=131 Identities=14% Similarity=0.219 Sum_probs=96.8
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCC--cHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPN--NEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLS 78 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~--~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~ 78 (150)
.+|.++ ..|++++|+..|+++++++|+ ++.++..++.+ ...| ++.+|+ ..+.+.+..+|+....+.
T Consensus 187 ~~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g--------~~~~A~--~~~~~al~~~~~~~~~~~ 255 (368)
T 1fch_A 187 ILGSLL-SDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSG--------EYDKAV--DCFTAALSVRPNDYLLWN 255 (368)
T ss_dssp TTHHHH-HHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTCHHHHH
T ss_pred HHHHHh-hcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCcCCHHHHH
Confidence 456666 888888888888888888888 78888888888 7777 666777 677777777776543210
Q ss_pred --------ChHHHHHH----HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCC-----------
Q psy3020 79 --------DPSYVQMI----KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTN----------- 135 (150)
Q Consensus 79 --------~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~----------- 135 (150)
...+...+ ..+...|.. +.++..+|.++...|++++|++.|+++++++|++
T Consensus 256 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 329 (368)
T 1fch_A 256 KLGATLANGNQSEEAVAAYRRALELQPGY------IRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMS 329 (368)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchh
Confidence 00111111 112234433 7889999999999999999999999999999998
Q ss_pred cchhhcHHHHHHhc
Q psy3020 136 HILFSNRSAAFAKA 149 (150)
Q Consensus 136 ~~~~~n~a~~~~~~ 149 (150)
+..|.++|.+|..+
T Consensus 330 ~~~~~~l~~~~~~~ 343 (368)
T 1fch_A 330 ENIWSTLRLALSML 343 (368)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHh
Confidence 88999999998765
No 62
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.55 E-value=2.7e-14 Score=108.58 Aligned_cols=113 Identities=12% Similarity=0.073 Sum_probs=99.0
Q ss_pred hhhHHHHhh---------CCHHHHHHHHHHhhccCCCcHHHHHHHHHH-Hhh--------hhccCCCCCchhhhhCChHH
Q psy3020 2 TTYSCLSYL---------GRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQ--------EMNDMNRGDPFANLFSDPNI 63 (150)
Q Consensus 2 ~lg~~~~~~---------~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~--------g~~~~~~~~~~~~a~~~~~~ 63 (150)
.+|.++... |++++|+..|+++++++|+++.++..+|.+ ..+ | ++.+|+ ..+
T Consensus 175 ~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g--------~~~~A~--~~~ 244 (474)
T 4abn_A 175 NLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPK--------ISQQAL--SAY 244 (474)
T ss_dssp HHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHH--------HHHHHH--HHH
T ss_pred HHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccc--------hHHHHH--HHH
Confidence 578899999 999999999999999999999999999999 777 6 667777 777
Q ss_pred HHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHH
Q psy3020 64 FVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRS 143 (150)
Q Consensus 64 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a 143 (150)
.+++.++|... .. +..|..+|.++...|++++|+++|+++++++|+++.++.+++
T Consensus 245 ~~al~~~p~~~-------------------~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~ 299 (474)
T 4abn_A 245 AQAEKVDRKAS-------------------SN------PDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQ 299 (474)
T ss_dssp HHHHHHCGGGG-------------------GC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHhCCCcc-------------------cC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 77777776210 11 788999999999999999999999999999999999999999
Q ss_pred HHHHhc
Q psy3020 144 AAFAKA 149 (150)
Q Consensus 144 ~~~~~~ 149 (150)
.++..+
T Consensus 300 ~~~~~l 305 (474)
T 4abn_A 300 QLLEFL 305 (474)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998754
No 63
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.55 E-value=8.3e-14 Score=99.72 Aligned_cols=127 Identities=9% Similarity=0.027 Sum_probs=100.8
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCC----
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPF---- 76 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~---- 76 (150)
.+|.++...|++++|++.|++ |++.+++..++.+ ..+| ...+|. ..+.+.+..+|+....
T Consensus 106 ~la~~~~~~g~~~~Al~~l~~-----~~~~~~~~~l~~~~~~~g--------~~~~A~--~~l~~~~~~~p~~~~~~l~~ 170 (291)
T 3mkr_A 106 MAASIYFYDQNPDAALRTLHQ-----GDSLECMAMTVQILLKLD--------RLDLAR--KELKKMQDQDEDATLTQLAT 170 (291)
T ss_dssp HHHHHHHHTTCHHHHHHHHTT-----CCSHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHhC-----CCCHHHHHHHHHHHHHCC--------CHHHHH--HHHHHHHhhCcCcHHHHHHH
Confidence 478999999999999999998 8999999999999 8889 667777 7778888888875421
Q ss_pred ------CCChHHHHHH----HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHH
Q psy3020 77 ------LSDPSYVQMI----KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAF 146 (150)
Q Consensus 77 ------~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~ 146 (150)
.....+...+ +.+...|.. +..|..+|.++...|++++|++.|+++++++|+++.+++|+|.++
T Consensus 171 a~~~l~~~~~~~~eA~~~~~~~l~~~p~~------~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~ 244 (291)
T 3mkr_A 171 AWVSLAAGGEKLQDAYYIFQEMADKCSPT------LLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLS 244 (291)
T ss_dssp HHHHHHHCTTHHHHHHHHHHHHHHHSCCC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHhCchHHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 0001111111 113335544 889999999999999999999999999999999999999999988
Q ss_pred Hhc
Q psy3020 147 AKA 149 (150)
Q Consensus 147 ~~~ 149 (150)
..+
T Consensus 245 ~~~ 247 (291)
T 3mkr_A 245 QHL 247 (291)
T ss_dssp HHT
T ss_pred HHc
Confidence 765
No 64
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.55 E-value=6.6e-14 Score=99.70 Aligned_cols=102 Identities=16% Similarity=0.165 Sum_probs=92.1
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.+++..|++++|+..|+++++++|+++.++..+|.+ ..+| ++.+|+ ..+.+++.++|++
T Consensus 9 ~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~--------~~~~A~--~~~~~al~~~p~~------- 71 (281)
T 2c2l_A 9 EQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQ--------QPEQAL--ADCRRALELDGQS------- 71 (281)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHTTSCTTC-------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhc--------CHHHHH--HHHHHHHHhCCCC-------
Confidence 479999999999999999999999999999999999999 9999 778888 8888888888854
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhc
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSN 141 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n 141 (150)
+.++..+|.++...|++++|+..|+++++++|+++..+..
T Consensus 72 ---------------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~ 111 (281)
T 2c2l_A 72 ---------------------VKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGD 111 (281)
T ss_dssp ---------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCS
T ss_pred ---------------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHH
Confidence 6789999999999999999999999999999988655443
No 65
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.55 E-value=1.3e-14 Score=90.20 Aligned_cols=99 Identities=11% Similarity=0.114 Sum_probs=83.2
Q ss_pred hhCCHHHHHHHHHHhhcc---CCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHH
Q psy3020 9 YLGRYKESISTYEEGLKL---DPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQ 84 (150)
Q Consensus 9 ~~~~~~~A~~~~~~aL~~---~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~ 84 (150)
..|++++|+.+|++++++ +|+++.++..+|.+ ..+| ++.+|+ ..+.+++..+|++
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~--------~~~~A~--~~~~~al~~~p~~----------- 60 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLG--------EYRKAE--AVLANGVKQFPNH----------- 60 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC-----------
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCCCc-----------
Confidence 468999999999999999 79999999999999 9999 778888 7888888888764
Q ss_pred HHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHH
Q psy3020 85 MIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAA 145 (150)
Q Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~ 145 (150)
+..+..+|.+++..|++++|++.|.++++.+|+++........+
T Consensus 61 -----------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ai 104 (117)
T 3k9i_A 61 -----------------QALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQAI 104 (117)
T ss_dssp -----------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHHHH
T ss_pred -----------------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 67889999999999999999999999999999998776554443
No 66
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.54 E-value=2.9e-13 Score=91.56 Aligned_cols=132 Identities=14% Similarity=0.116 Sum_probs=98.6
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCC----
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPF---- 76 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~---- 76 (150)
.+|.++...|++++|++.|+++++++|+++.++..++.+ ...| ++.+++ ..+.+.+..+|+....
T Consensus 13 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------~~~~A~--~~~~~a~~~~~~~~~~~~~l 82 (225)
T 2vq2_A 13 QLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLK--------VNDKAQ--ESFRQALSIKPDSAEINNNY 82 (225)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcC--------ChHHHH--HHHHHHHHhCCCChHHHHHH
Confidence 468889999999999999999999999999999999988 8888 666777 6777777777765532
Q ss_pred ------C-CCh-HHHHHHHH-Hh--cCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHH
Q psy3020 77 ------L-SDP-SYVQMIKE-IQ--KDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAA 145 (150)
Q Consensus 77 ------~-~~~-~~~~~~~~-l~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~ 145 (150)
. .+. .....+.. +. ..|.. ...+..+|.++...|++++|++.|.++++.+|+++.+++++|.+
T Consensus 83 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 156 (225)
T 2vq2_A 83 GWFLCGRLNRPAESMAYFDKALADPTYPTP------YIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELART 156 (225)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHHTSTTCSCH------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHhcCcHHHHHHHHHHHHcCcCCcch------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHH
Confidence 1 211 11111221 22 22322 67888888888889999999999999999999888888888888
Q ss_pred HHhc
Q psy3020 146 FAKA 149 (150)
Q Consensus 146 ~~~~ 149 (150)
+..+
T Consensus 157 ~~~~ 160 (225)
T 2vq2_A 157 KMLA 160 (225)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 8764
No 67
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.54 E-value=1.6e-13 Score=92.82 Aligned_cols=107 Identities=14% Similarity=0.103 Sum_probs=94.6
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.++...|++++|+..|++++ +| ++.++..+|.+ ..+| ++.+|+ ..+.+++..+|+.
T Consensus 11 ~~g~~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g--------~~~~A~--~~~~~al~~~~~~------- 70 (213)
T 1hh8_A 11 NEGVLAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILK--------NMTEAE--KAFTRSINRDKHL------- 70 (213)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC-------
T ss_pred HHHHHHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCccc-------
Confidence 57899999999999999999996 44 78899999999 8999 677888 7777777777653
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCc----------------chhhcHHH
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNH----------------ILFSNRSA 144 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~----------------~~~~n~a~ 144 (150)
+.+|..+|.++...|++++|+++|++++++.|++. .+++++|.
T Consensus 71 ---------------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (213)
T 1hh8_A 71 ---------------------AVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAF 129 (213)
T ss_dssp ---------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHH
T ss_pred ---------------------hHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHH
Confidence 67899999999999999999999999999998877 99999999
Q ss_pred HHHhc
Q psy3020 145 AFAKA 149 (150)
Q Consensus 145 ~~~~~ 149 (150)
+|..+
T Consensus 130 ~~~~~ 134 (213)
T 1hh8_A 130 MYAKK 134 (213)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 99875
No 68
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.54 E-value=1.6e-13 Score=90.04 Aligned_cols=104 Identities=7% Similarity=-0.005 Sum_probs=75.4
Q ss_pred cHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCC--------ChHHHHH---HH-HHhcCcchh
Q psy3020 30 NEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLS--------DPSYVQM---IK-EIQKDPSLM 96 (150)
Q Consensus 30 ~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~--------~~~~~~~---~~-~l~~~~~~~ 96 (150)
...++..++.+ ...| ++.+++ ..+.+.+..+|+....+. ...+... +. .+...|..
T Consensus 7 ~~~~~~~~~~~~~~~~--------~~~~A~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~- 75 (186)
T 3as5_A 7 RQVYYRDKGISHAKAG--------RYSQAV--MLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDN- 75 (186)
T ss_dssp HHHHHHHHHHHHHHHT--------CHHHHH--HHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-
T ss_pred hhHHHHHHHHHHHHhc--------CHHHHH--HHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC-
Confidence 45677888888 8888 667777 677777777776543210 0011111 11 12233433
Q ss_pred hhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 97 TLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+..+..+|.++...|++++|++.|.++++.+|+++..++++|.++..+
T Consensus 76 -----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 123 (186)
T 3as5_A 76 -----VKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNL 123 (186)
T ss_dssp -----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred -----HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHc
Confidence 788999999999999999999999999999999999999999998765
No 69
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.53 E-value=3.4e-14 Score=91.16 Aligned_cols=94 Identities=11% Similarity=0.011 Sum_probs=82.1
Q ss_pred HHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchh
Q psy3020 18 STYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLM 96 (150)
Q Consensus 18 ~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 96 (150)
..|+++++++|++..++..+|.+ ...| ++.+|+ ..+.+.+..+|++
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g--------~~~~A~--~~~~~al~~~p~~----------------------- 51 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAG--------KWDDAQ--KIFQALCMLDHYD----------------------- 51 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC-----------------------
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHc--------cHHHHH--HHHHHHHHhCCcc-----------------------
Confidence 57899999999999999999999 8889 777888 7777777777754
Q ss_pred hhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 97 TLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+..|..+|.++...|++++|+.+|+++++++|+++.+++++|.||..+
T Consensus 52 -----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 99 (142)
T 2xcb_A 52 -----ARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQL 99 (142)
T ss_dssp -----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHT
T ss_pred -----HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHc
Confidence 778999999999999999999999999999999999999999999875
No 70
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.53 E-value=1.9e-13 Score=93.65 Aligned_cols=132 Identities=12% Similarity=0.112 Sum_probs=91.6
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCC--
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLS-- 78 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~-- 78 (150)
.+|.++...|++++|+..|+++++++|++..++..++.+ ..+| ++.+|+ ..+.+.+...|+......
T Consensus 62 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~--------~~~~A~--~~~~~~~~~~~~~~~~~~~~ 131 (243)
T 2q7f_A 62 NFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKE--------MYKEAK--DMFEKALRAGMENGDLFYML 131 (243)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHTCCSHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhc--------cHHHHH--HHHHHHHHhCCCCHHHHHHH
Confidence 467788888888888888888888888888888888887 7777 556666 666666777776543210
Q ss_pred ------ChHHHHH---H-HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 79 ------DPSYVQM---I-KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 79 ------~~~~~~~---~-~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
...+... + ..+...|.. +..+..+|.++...|++++|++.|+++++.+|+++..++++|.+|..
T Consensus 132 a~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 205 (243)
T 2q7f_A 132 GTVLVKLEQPKLALPYLQRAVELNEND------TEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAY 205 (243)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCcc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 0011111 1 112223333 67788888888888888888888888888888888888888888876
Q ss_pred c
Q psy3020 149 A 149 (150)
Q Consensus 149 ~ 149 (150)
+
T Consensus 206 ~ 206 (243)
T 2q7f_A 206 K 206 (243)
T ss_dssp T
T ss_pred c
Confidence 4
No 71
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.53 E-value=6.8e-14 Score=103.47 Aligned_cols=110 Identities=12% Similarity=0.150 Sum_probs=100.0
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhc----------------cCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHH
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLK----------------LDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIF 64 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~----------------~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~ 64 (150)
.+|.+++..|+|++|+..|++||+ ++|.+..++..+|.+ ..+| ++.+|+ ..+.
T Consensus 228 ~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g--------~~~~A~--~~~~ 297 (370)
T 1ihg_A 228 NIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMS--------DWQGAV--DSCL 297 (370)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhcc--------CHHHHH--HHHH
Confidence 478999999999999999999999 899999999999999 9999 777888 8888
Q ss_pred HhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHH
Q psy3020 65 VQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSA 144 (150)
Q Consensus 65 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~ 144 (150)
+++.++|+. +.+|..+|.++...|++++|++.|+++++++|+++.++.+++.
T Consensus 298 ~al~~~p~~----------------------------~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~ 349 (370)
T 1ihg_A 298 EALEIDPSN----------------------------TKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLK 349 (370)
T ss_dssp HHHTTCTTC----------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHhCchh----------------------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 888888753 7789999999999999999999999999999999999999998
Q ss_pred HHHhc
Q psy3020 145 AFAKA 149 (150)
Q Consensus 145 ~~~~~ 149 (150)
++..+
T Consensus 350 ~~~~~ 354 (370)
T 1ihg_A 350 VKQKI 354 (370)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87653
No 72
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.53 E-value=9.1e-14 Score=99.92 Aligned_cols=136 Identities=18% Similarity=0.227 Sum_probs=95.1
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCC---
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFL--- 77 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~--- 77 (150)
.+|.++...|++++|+..|+++++++|+++.++..++.+ ...| ++.+++ ..+.+.+..+|+.....
T Consensus 159 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~--------~~~~A~--~~~~~a~~~~~~~~~~~~~~ 228 (359)
T 3ieg_A 159 LRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQLG--------DHELSL--SEVRECLKLDQDHKRCFAHY 228 (359)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHhhCccchHHHHHH
Confidence 478888888999999999999999999989888888888 8888 666777 77777777788765421
Q ss_pred -----------------CChHHHHHHH----HHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCc
Q psy3020 78 -----------------SDPSYVQMIK----EIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNH 136 (150)
Q Consensus 78 -----------------~~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~ 136 (150)
....+...+. .+...|... ......+..+|.++...|++++|++.|+++++++|+++
T Consensus 229 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 306 (359)
T 3ieg_A 229 KQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVA--EYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNV 306 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSH--HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCch--HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccH
Confidence 0001111111 122222220 01134566788888888888888888888888888888
Q ss_pred chhhcHHHHHHhc
Q psy3020 137 ILFSNRSAAFAKA 149 (150)
Q Consensus 137 ~~~~n~a~~~~~~ 149 (150)
.+++++|.+|..+
T Consensus 307 ~~~~~~~~~~~~~ 319 (359)
T 3ieg_A 307 NALKDRAEAYLIE 319 (359)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 8888888888764
No 73
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.53 E-value=1.6e-13 Score=94.13 Aligned_cols=130 Identities=14% Similarity=0.131 Sum_probs=101.6
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCC--
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLS-- 78 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~-- 78 (150)
.+|.++...|++++|++.|+++++++|+++.++..++.+ ...| ++.+|+ ..+.+.+...|+......
T Consensus 96 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~--------~~~~A~--~~~~~~~~~~~~~~~~~~~l 165 (243)
T 2q7f_A 96 GAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLE--------QPKLAL--PYLQRAVELNENDTEARFQF 165 (243)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTS--------CHHHHH--HHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc--------cHHHHH--HHHHHHHHhCCccHHHHHHH
Confidence 478999999999999999999999999999999999999 8888 667777 777888888887654210
Q ss_pred --------C-hHHHHHH-HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHH
Q psy3020 79 --------D-PSYVQMI-KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFA 147 (150)
Q Consensus 79 --------~-~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~ 147 (150)
+ ......+ ..+...|.. +..+..+|.++...|++++|+++|+++++++|+++.++..++.+..
T Consensus 166 ~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l~~ 238 (243)
T 2q7f_A 166 GMCLANEGMLDEALSQFAAVTEQDPGH------ADAFYNAGVTYAYKENREKALEMLDKAIDIQPDHMLALHAKKLLGH 238 (243)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCTTHHHHHHHHHHHHCTTCHHHHHHHTC---
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCccc------HHHHHHHHHHHHHccCHHHHHHHHHHHHccCcchHHHHHHHHHHHh
Confidence 0 0111111 112333433 7889999999999999999999999999999999999988876643
No 74
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.52 E-value=2e-13 Score=84.88 Aligned_cols=115 Identities=12% Similarity=0.135 Sum_probs=95.0
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.++...|++++|+..|+++++++|+++.++..+|.+ ..+| ++.+++ ..+.+.+...|+....
T Consensus 9 ~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~--------~~~~A~--~~~~~~~~~~~~~~~~---- 74 (131)
T 1elr_A 9 ELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKG--------DYNKCR--ELCEKAIEVGRENRED---- 74 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHHHHHHSTTC----
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhc--------cHHHHH--HHHHHHHhhccccchh----
Confidence 579999999999999999999999999999999999999 8888 667777 6666666665543210
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
.. ..+..+..+|.++...|++++|+++|+++++++| ++..+..++.+...
T Consensus 75 -~~----------------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~ 124 (131)
T 1elr_A 75 -YR----------------QIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKI 124 (131)
T ss_dssp -HH----------------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHH
T ss_pred -HH----------------HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHH
Confidence 00 1167889999999999999999999999999999 68888888877653
No 75
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.52 E-value=1.2e-13 Score=83.72 Aligned_cols=99 Identities=18% Similarity=0.095 Sum_probs=87.6
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.++...|++++|+..|+++++++|++..++..+|.+ ..+| .+.+|+ ..+.+.+..+|+..
T Consensus 11 ~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~--------~~~~A~--~~~~~a~~~~~~~~------ 74 (112)
T 2kck_A 11 LEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLE--------RYEEAV--DCYNYVINVIEDEY------ 74 (112)
T ss_dssp GHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHTSCCTT------
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcc--------CHHHHH--HHHHHHHHhCcccc------
Confidence 589999999999999999999999999999999999999 8888 667777 77777777777510
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHh-cCHHHHHHHHHHHHhhcCCCc
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQA-NNFKEAIEAYSEAIKLDGTNH 136 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~A~~~~~~al~~~p~~~ 136 (150)
. ...+..+|.++... |++++|++++++++..+|.++
T Consensus 75 --------------~------~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 75 --------------N------KDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp --------------C------HHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred --------------h------HHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 1 67899999999999 999999999999999999875
No 76
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.52 E-value=3.3e-13 Score=91.26 Aligned_cols=124 Identities=10% Similarity=-0.006 Sum_probs=100.4
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.+|...|++++|+..|+++++++|+++.++..+|.+ ..+| ++.+|+ ..+.+++...|++......
T Consensus 42 ~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~--------~~~~A~--~~~~~al~~~~~~~~~~~~- 110 (213)
T 1hh8_A 42 NIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTE--------KYDLAI--KDLKEALIQLRGNQLIDYK- 110 (213)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHTTTTCSEEECG-
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcc--------cHHHHH--HHHHHHHHhCCCccHHHHH-
Confidence 589999999999999999999999999999999999999 9999 778888 8888888888876521100
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHH
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFA 147 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~ 147 (150)
...+...|.. +..+..+|.++...|++++|+++|.++++++|++.......+...+
T Consensus 111 -----~~~~~~~~~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~ 166 (213)
T 1hh8_A 111 -----ILGLQFKLFA------CEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECV 166 (213)
T ss_dssp -----GGTBCCEEEH------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGGGHHHHHHHHH
T ss_pred -----HhccccCccc------hHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccccchHHHHHHHH
Confidence 0000112222 7889999999999999999999999999999988776666665544
No 77
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.52 E-value=2.8e-13 Score=96.53 Aligned_cols=61 Identities=8% Similarity=-0.097 Sum_probs=33.9
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCC
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRT 73 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~ 73 (150)
+|.++...|++++|+..|+++++++|++..++..++.+ ...| ++.+|. ..+.+++..+|++
T Consensus 131 l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~--------~~~~A~--~~~~~al~~~~~~ 192 (330)
T 3hym_B 131 YGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTN--------NSKLAE--RFFSQALSIAPED 192 (330)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHTTCTTC
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHh--------hHHHHH--HHHHHHHHhCCCC
Confidence 45555555666666666666666655555555555555 5555 444444 4555555555544
No 78
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.52 E-value=2.8e-13 Score=94.46 Aligned_cols=103 Identities=14% Similarity=0.056 Sum_probs=78.5
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.++...|++++|+..|+++++++|+++.++..+|.+ ...| ++.+|+ ..+.+++..+|+.
T Consensus 48 ~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~--------~~~~A~--~~~~~al~~~~~~------- 110 (275)
T 1xnf_A 48 ERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAG--------NFDAAY--EAFDSVLELDPTY------- 110 (275)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC-------
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHcc--------CHHHHH--HHHHHHHhcCccc-------
Confidence 478899999999999999999999999999999999999 8888 667777 7777777777754
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcH
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNR 142 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~ 142 (150)
+.++..+|.+++..|++++|+++|.++++++|+++..+...
T Consensus 111 ---------------------~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 151 (275)
T 1xnf_A 111 ---------------------NYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWL 151 (275)
T ss_dssp ---------------------THHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred ---------------------cHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 44566666666666666666666666666666665444333
No 79
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.51 E-value=3.2e-13 Score=97.08 Aligned_cols=132 Identities=15% Similarity=0.135 Sum_probs=95.8
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCC---CCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDP---RTKPFL 77 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~---~~~~~~ 77 (150)
.+|.++...|++++|+..|+++++++|+++.++..+|.+ ...| ++.+|+ ..+.+.+..+| +.....
T Consensus 42 ~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------~~~~A~--~~~~~~~~~~~~~~~~~~~~ 111 (359)
T 3ieg_A 42 RRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQG--------KLDEAE--DDFKKVLKSNPSEQEEKEAE 111 (359)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHTSCCCHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcC--------ChHHHH--HHHHHHHhcCCcccChHHHH
Confidence 467778888888888888888888888888888888887 7777 666777 77777788777 443321
Q ss_pred CC--------------------hHHHHHH----HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q psy3020 78 SD--------------------PSYVQMI----KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDG 133 (150)
Q Consensus 78 ~~--------------------~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p 133 (150)
.. ..+...+ ..+...|.. +..+..+|.++...|++++|++.|.++++++|
T Consensus 112 ~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 185 (359)
T 3ieg_A 112 SQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWD------AELRELRAECFIKEGEPRKAISDLKAASKLKS 185 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc------hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC
Confidence 00 0011111 112233333 78888999999999999999999999999999
Q ss_pred CCcchhhcHHHHHHhc
Q psy3020 134 TNHILFSNRSAAFAKA 149 (150)
Q Consensus 134 ~~~~~~~n~a~~~~~~ 149 (150)
+++..++++|.++..+
T Consensus 186 ~~~~~~~~la~~~~~~ 201 (359)
T 3ieg_A 186 DNTEAFYKISTLYYQL 201 (359)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc
Confidence 9999999999998764
No 80
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.51 E-value=2.7e-13 Score=96.63 Aligned_cols=133 Identities=14% Similarity=-0.024 Sum_probs=102.4
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCC-
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSD- 79 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~- 79 (150)
.+|.++...|++++|+..|+++++.+|+++.++..++.+ ...|+ .+.+|. ..+.+++..+|+.......
T Consensus 61 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------~~~~A~--~~~~~a~~~~~~~~~~~~~l 131 (330)
T 3hym_B 61 VHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGH-------KNEHAR--RYLSKATTLEKTYGPAWIAY 131 (330)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCS-------CHHHHH--HHHHHHHTTCTTCTHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhh-------hHHHHH--HHHHHHHHhCCccHHHHHHH
Confidence 367889999999999999999999999999999999998 77772 235566 6777788888876653110
Q ss_pred -------hHHHHHH----HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 80 -------PSYVQMI----KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 80 -------~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
..+...+ ..+...|.. ...+..+|.++...|++++|++.|+++++++|+++.+++++|.++..
T Consensus 132 ~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 205 (330)
T 3hym_B 132 GHSFAVESEHDQAMAAYFTAAQLMKGC------HLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQ 205 (330)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHTTTC------SHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHhcccc------HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 0111111 112223333 67888899999999999999999999999999999999999999986
Q ss_pred c
Q psy3020 149 A 149 (150)
Q Consensus 149 ~ 149 (150)
+
T Consensus 206 ~ 206 (330)
T 3hym_B 206 N 206 (330)
T ss_dssp T
T ss_pred c
Confidence 5
No 81
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.51 E-value=8.3e-13 Score=93.98 Aligned_cols=131 Identities=16% Similarity=0.149 Sum_probs=79.5
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCC-
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSD- 79 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~- 79 (150)
.+|.++...|++++|+..|+++++++|+++.++..++.+ ...| ++.+|+ ..+.+.+..+|+.......
T Consensus 60 ~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~--------~~~~A~--~~~~~~~~~~~~~~~~~~~~ 129 (327)
T 3cv0_A 60 SLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEH--------NANAAL--ASLRAWLLSQPQYEQLGSVN 129 (327)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHTSTTTTTC----
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCCccHHHHHHH
Confidence 467888888888888888888888888888888888888 7777 556666 6666667777765532210
Q ss_pred ----------------------hHHHHHHHH----HhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q psy3020 80 ----------------------PSYVQMIKE----IQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDG 133 (150)
Q Consensus 80 ----------------------~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p 133 (150)
..+...+.. +...|.. +..+..+|.++...|++++|++.|.++++.+|
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 203 (327)
T 3cv0_A 130 LQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPND------AQLHASLGVLYNLSNNYDSAAANLRRAVELRP 203 (327)
T ss_dssp ----------------CCTTSHHHHHHHHHHHHHHHHHSTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 111111111 2223322 45555555555555555555555555555555
Q ss_pred CCcchhhcHHHHHHh
Q psy3020 134 TNHILFSNRSAAFAK 148 (150)
Q Consensus 134 ~~~~~~~n~a~~~~~ 148 (150)
+++.++.++|.++..
T Consensus 204 ~~~~~~~~l~~~~~~ 218 (327)
T 3cv0_A 204 DDAQLWNKLGATLAN 218 (327)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHH
Confidence 555555555555543
No 82
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.50 E-value=3e-13 Score=96.27 Aligned_cols=128 Identities=10% Similarity=0.205 Sum_probs=92.9
Q ss_pred HHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCC------
Q psy3020 6 CLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLS------ 78 (150)
Q Consensus 6 ~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~------ 78 (150)
++...|++++|+..|+++++.+|+++.++..++.+ ...| ++.+|+ ..+.+.+..+|+......
T Consensus 147 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~--------~~~~A~--~~~~~~~~~~~~~~~~~~~l~~~~ 216 (327)
T 3cv0_A 147 FFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSN--------NYDSAA--ANLRRAVELRPDDAQLWNKLGATL 216 (327)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhc--------cHHHHH--HHHHHHHHhCCCcHHHHHHHHHHH
Confidence 36777788888888888888888888888888777 7777 556666 666666777776543210
Q ss_pred --ChHHHHH---H-HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCC------------Ccchhh
Q psy3020 79 --DPSYVQM---I-KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGT------------NHILFS 140 (150)
Q Consensus 79 --~~~~~~~---~-~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~------------~~~~~~ 140 (150)
...+... + ..+...|.. +..+..+|.++...|++++|++.|+++++++|+ ++..|.
T Consensus 217 ~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 290 (327)
T 3cv0_A 217 ANGNRPQEALDAYNRALDINPGY------VRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWD 290 (327)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHH
Confidence 0011111 1 112233433 788999999999999999999999999999999 799999
Q ss_pred cHHHHHHhc
Q psy3020 141 NRSAAFAKA 149 (150)
Q Consensus 141 n~a~~~~~~ 149 (150)
++|.++..+
T Consensus 291 ~l~~~~~~~ 299 (327)
T 3cv0_A 291 FFRMLLNVM 299 (327)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 999999875
No 83
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.50 E-value=5e-13 Score=92.40 Aligned_cols=132 Identities=16% Similarity=0.134 Sum_probs=78.1
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCC---
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFL--- 77 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~--- 77 (150)
.+|.++...|++++|+..|+++++++|+++.++..++.+ ...| ++.+|+ ..+.+.+..+|+.....
T Consensus 42 ~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~--------~~~~A~--~~~~~a~~~~~~~~~~~~~l 111 (252)
T 2ho1_A 42 QLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEM--------EPKLAD--EEYRKALASDSRNARVLNNY 111 (252)
T ss_dssp HHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHHCcCcHHHHHHH
Confidence 356677777777777777777777777777777777777 6666 455555 55556666666543311
Q ss_pred -------CC-hHHHHHHHH-Hh--cCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHH
Q psy3020 78 -------SD-PSYVQMIKE-IQ--KDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAF 146 (150)
Q Consensus 78 -------~~-~~~~~~~~~-l~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~ 146 (150)
.+ ......+.. +. ..|.. +..+..+|.++...|++++|+++|.++++.+|+++.+++++|.++
T Consensus 112 a~~~~~~g~~~~A~~~~~~~~~~~~~~~~------~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 185 (252)
T 2ho1_A 112 GGFLYEQKRYEEAYQRLLEASQDTLYPER------SRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLL 185 (252)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTTCTTCTTH------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHhCccCccc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 00 001111111 11 12222 566666666666677777777777777777776666666666666
Q ss_pred Hhc
Q psy3020 147 AKA 149 (150)
Q Consensus 147 ~~~ 149 (150)
..+
T Consensus 186 ~~~ 188 (252)
T 2ho1_A 186 YKE 188 (252)
T ss_dssp HHT
T ss_pred HHc
Confidence 543
No 84
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.49 E-value=6.4e-13 Score=87.72 Aligned_cols=100 Identities=21% Similarity=0.248 Sum_probs=63.5
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-H-hhhhccCCCCCch--hhhhCChHHHHhhccCCCCCCCCC
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-R-NQEMNDMNRGDPF--ANLFSDPNIFVQLQLDPRTKPFLS 78 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~-~~g~~~~~~~~~~--~~a~~~~~~~~~l~~~~~~~~~~~ 78 (150)
+|.++...|++++|+..|+++++++|+++.++..++.+ . ..| .+ .+++ ..+.+.+..+|+
T Consensus 50 lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~--------~~~~~~A~--~~~~~al~~~p~------ 113 (177)
T 2e2e_A 50 LGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQAS--------QHMTAQTR--AMIDKALALDSN------ 113 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTT--------TCCCHHHH--HHHHHHHHHCTT------
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcC--------CcchHHHH--HHHHHHHHhCCC------
Confidence 45555555555555555555555555555555555544 2 333 22 3333 333333333332
Q ss_pred ChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhh
Q psy3020 79 DPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFS 140 (150)
Q Consensus 79 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 140 (150)
. +.++..+|.+++..|++++|+..|.++++++|+++....
T Consensus 114 ----------------~------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 153 (177)
T 2e2e_A 114 ----------------E------ITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQ 153 (177)
T ss_dssp ----------------C------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHH
T ss_pred ----------------c------HHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHH
Confidence 2 678899999999999999999999999999999876543
No 85
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.48 E-value=5.2e-14 Score=102.79 Aligned_cols=108 Identities=12% Similarity=0.119 Sum_probs=81.9
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcH-----------------HHHHHHHHH-HhhhhccCCCCCchhhhhCChHH
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNE-----------------QMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNI 63 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~-----------------~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~ 63 (150)
.+|.+++..|+|++|+..|++|++++|++. .++..+|.+ ..+| ++.+|+ ..+
T Consensus 184 ~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g--------~~~~A~--~~~ 253 (338)
T 2if4_A 184 MDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLK--------RYDEAI--GHC 253 (338)
T ss_dssp HHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTT--------CCHHHH--HHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcC--------CHHHHH--HHH
Confidence 478999999999999999999999999988 488999999 8888 667788 788
Q ss_pred HHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHH
Q psy3020 64 FVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRS 143 (150)
Q Consensus 64 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a 143 (150)
.+++.++|++ +.+|..+|.++...|++++|+.+|+++++++|+++.++.+++
T Consensus 254 ~~al~~~p~~----------------------------~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~ 305 (338)
T 2if4_A 254 NIVLTEEEKN----------------------------PKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELR 305 (338)
T ss_dssp HHHHHHCTTC----------------------------HHHHHHHHHHHHTTTCHHHHHHHHHHTTC-------------
T ss_pred HHHHHhCCCC----------------------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 8888877753 778999999999999999999999999999999999999998
Q ss_pred HHHH
Q psy3020 144 AAFA 147 (150)
Q Consensus 144 ~~~~ 147 (150)
.+..
T Consensus 306 ~l~~ 309 (338)
T 2if4_A 306 ALAE 309 (338)
T ss_dssp ----
T ss_pred HHHH
Confidence 7743
No 86
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.48 E-value=3.6e-14 Score=93.78 Aligned_cols=107 Identities=12% Similarity=0.116 Sum_probs=89.7
Q ss_pred HHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHH
Q psy3020 5 SCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYV 83 (150)
Q Consensus 5 ~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~ 83 (150)
..+...|++++|+..|+++++.+|+++.++..+|.+ ...| ++.+|+ ..+.+++..+|++
T Consensus 18 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~--------~~~~A~--~~~~~al~~~p~~---------- 77 (177)
T 2e2e_A 18 HQFASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQN--------DYSNSL--LAYRQALQLRGEN---------- 77 (177)
T ss_dssp CCCC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHCSC----------
T ss_pred hhhhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHcCCCC----------
Confidence 345678999999999999999999999999999999 8888 667777 6777777766643
Q ss_pred HHHHHHhcCcchhhhHHHhHHHHHHHHH-HHHhcCH--HHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 84 QMIKEIQKDPSLMTLEAKISLLKDKGNA-ALQANNF--KEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 84 ~~~~~l~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~--~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+..+..+|.+ ++..|++ ++|+..|.++++++|+++.+++++|.+|..+
T Consensus 78 ------------------~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 128 (177)
T 2e2e_A 78 ------------------AELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQ 128 (177)
T ss_dssp ------------------HHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred ------------------HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 6778899999 7799999 9999999999999999999999999999875
No 87
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.45 E-value=5.3e-13 Score=99.30 Aligned_cols=132 Identities=14% Similarity=0.130 Sum_probs=82.5
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCC---CCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTK---PFL 77 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~---~~~ 77 (150)
.+|.++...|++++|+..|+++++++|+++.++..++.+ ..+| .+.+|. ..+.+.+..+|+.. ...
T Consensus 65 ~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g--------~~~~A~--~~~~~~~~~~~~~~~~~~~~ 134 (450)
T 2y4t_A 65 RRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQG--------KLDEAE--DDFKKVLKSNPSENEEKEAQ 134 (450)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHTSCCCHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHhcCCCChhhHHHH
Confidence 356677777777777777777777777777777777777 6666 555666 66666666666544 210
Q ss_pred C--------------------ChHHHHHH----HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q psy3020 78 S--------------------DPSYVQMI----KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDG 133 (150)
Q Consensus 78 ~--------------------~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p 133 (150)
. ...+...+ ..+...|.. +..+..+|.++...|++++|++.|.++++.+|
T Consensus 135 ~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~ 208 (450)
T 2y4t_A 135 SQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWD------AELRELRAECFIKEGEPRKAISDLKAASKLKN 208 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC
Confidence 0 00000111 011223322 56677777777777777777777777777777
Q ss_pred CCcchhhcHHHHHHhc
Q psy3020 134 TNHILFSNRSAAFAKA 149 (150)
Q Consensus 134 ~~~~~~~n~a~~~~~~ 149 (150)
+++.+++++|.+|..+
T Consensus 209 ~~~~~~~~l~~~~~~~ 224 (450)
T 2y4t_A 209 DNTEAFYKISTLYYQL 224 (450)
T ss_dssp SCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHc
Confidence 7777777777777654
No 88
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.44 E-value=3.3e-12 Score=88.24 Aligned_cols=132 Identities=12% Similarity=0.077 Sum_probs=101.1
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhc--cCCCCCCCC-
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQ--LDPRTKPFL- 77 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~--~~~~~~~~~- 77 (150)
.+|.++...|++++|++.|+++++++|++..++..++.+ ...| ++.++. ..+.+.+. ..|......
T Consensus 76 ~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g--------~~~~A~--~~~~~~~~~~~~~~~~~~~~ 145 (252)
T 2ho1_A 76 ALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQK--------RYEEAY--QRLLEASQDTLYPERSRVFE 145 (252)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHTTCTTCTTHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHh--------HHHHHH--HHHHHHHhCccCcccHHHHH
Confidence 578999999999999999999999999999999999999 8888 666776 66666666 455433211
Q ss_pred -------CChHHHHH---H-HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHH
Q psy3020 78 -------SDPSYVQM---I-KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAF 146 (150)
Q Consensus 78 -------~~~~~~~~---~-~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~ 146 (150)
....+... + ..+...|.. +..+..+|.++...|++++|+..|+++++.+|+++..+..++.++
T Consensus 146 ~la~~~~~~g~~~~A~~~~~~~~~~~~~~------~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (252)
T 2ho1_A 146 NLGLVSLQMKKPAQAKEYFEKSLRLNRNQ------PSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLA 219 (252)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSCC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCccc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHH
Confidence 00011111 1 112234433 788999999999999999999999999999999999999999988
Q ss_pred Hhc
Q psy3020 147 AKA 149 (150)
Q Consensus 147 ~~~ 149 (150)
..+
T Consensus 220 ~~~ 222 (252)
T 2ho1_A 220 KVF 222 (252)
T ss_dssp HHT
T ss_pred HHc
Confidence 754
No 89
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.44 E-value=8.9e-13 Score=100.01 Aligned_cols=131 Identities=12% Similarity=0.060 Sum_probs=88.2
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCC-
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSD- 79 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~- 79 (150)
.+|.++...|++++|+..|+++++++|+ +.++..++.+ ...| ++.+++ ..+.+.+..+|+....+..
T Consensus 248 ~~g~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~~~--------~~~~A~--~~~~~~~~~~~~~~~~~~~l 316 (537)
T 3fp2_A 248 YTGIFHFLKNNLLDAQVLLQESINLHPT-PNSYIFLALTLADKE--------NSQEFF--KFFQKAVDLNPEYPPTYYHR 316 (537)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHTCCSS--------CCHHHH--HHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHhcccHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHhc--------CHHHHH--HHHHHHhccCCCCHHHHHHH
Confidence 3577777788888888888888888887 7777777777 7777 556666 6666677777765442100
Q ss_pred -------hHHHHHH----HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 80 -------PSYVQMI----KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 80 -------~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
..+...+ ..+...|.. +..+..+|.++...|++++|++.|+++++++|+++.+++++|.++..
T Consensus 317 ~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 390 (537)
T 3fp2_A 317 GQMYFILQDYKNAKEDFQKAQSLNPEN------VYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTD 390 (537)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTC------SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 0111111 112233333 66777888888888888888888888888888888888888887765
Q ss_pred c
Q psy3020 149 A 149 (150)
Q Consensus 149 ~ 149 (150)
+
T Consensus 391 ~ 391 (537)
T 3fp2_A 391 R 391 (537)
T ss_dssp T
T ss_pred h
Confidence 4
No 90
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.44 E-value=4.5e-13 Score=95.63 Aligned_cols=116 Identities=14% Similarity=0.210 Sum_probs=82.5
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCc------HHHHHHHHHH-Hhh-hhccCCCCCchhhhhCChHHHHhhccCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNN------EQMKEAIKDV-RNQ-EMNDMNRGDPFANLFSDPNIFVQLQLDPRT 73 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~------~~a~~~l~~~-~~~-g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~ 73 (150)
.+|.+|..+|++++|+.+|++|+++.|.. ..++..+|.+ ... | ++.+|+ ..+.+++.+.|+.
T Consensus 82 ~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg--------~~~~A~--~~~~~Al~~~~~~ 151 (292)
T 1qqe_A 82 EAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLH--------DYAKAI--DCYELAGEWYAQD 151 (292)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC--------CHHHHH--HHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhc--------CHHHHH--HHHHHHHHHHHhC
Confidence 46777777777777777777777776643 3456666766 553 6 555666 5665555554432
Q ss_pred CCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcc-------hhhcHHHHH
Q psy3020 74 KPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHI-------LFSNRSAAF 146 (150)
Q Consensus 74 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~-------~~~n~a~~~ 146 (150)
.. + ......+..+|.++...|+|++|+.+|++++++.|++.. .++++|.|+
T Consensus 152 ~~-----------------~-----~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~ 209 (292)
T 1qqe_A 152 QS-----------------V-----ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQ 209 (292)
T ss_dssp TC-----------------H-----HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHH
T ss_pred CC-----------------h-----HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHH
Confidence 11 0 011567899999999999999999999999999998865 468899998
Q ss_pred Hhc
Q psy3020 147 AKA 149 (150)
Q Consensus 147 ~~~ 149 (150)
..+
T Consensus 210 ~~~ 212 (292)
T 1qqe_A 210 LAA 212 (292)
T ss_dssp HHT
T ss_pred HHc
Confidence 764
No 91
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.43 E-value=1.1e-12 Score=97.52 Aligned_cols=131 Identities=21% Similarity=0.265 Sum_probs=95.8
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHH------------HHH-HhhhhccCCCCCchhhhhCChHHHHhhc
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAI------------KDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQ 68 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l------------~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~ 68 (150)
.+|.+|...|++++|+..|+++++++|++..++..+ +.+ ...| .+.+|+ ..+.+.+.
T Consensus 216 ~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--------~~~~A~--~~~~~~l~ 285 (450)
T 2y4t_A 216 KISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDG--------RYTDAT--SKYESVMK 285 (450)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHh
Confidence 467888888888888888888888888888877655 666 6666 566777 77777788
Q ss_pred cCCCCCCC------------CCChHHHHHH---HH-HhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Q psy3020 69 LDPRTKPF------------LSDPSYVQMI---KE-IQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLD 132 (150)
Q Consensus 69 ~~~~~~~~------------~~~~~~~~~~---~~-l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 132 (150)
..|++... .....+...+ .. +...|.. +.+|..+|.++...|++++|++.|+++++++
T Consensus 286 ~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 359 (450)
T 2y4t_A 286 TEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDN------VNALKDRAEAYLIEEMYDEAIQDYETAQEHN 359 (450)
T ss_dssp HCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTS
T ss_pred cCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCccc------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 88875321 0011111111 11 3334444 7889999999999999999999999999999
Q ss_pred CCCcchhhcHHHHHHh
Q psy3020 133 GTNHILFSNRSAAFAK 148 (150)
Q Consensus 133 p~~~~~~~n~a~~~~~ 148 (150)
|+++..+..++.+...
T Consensus 360 p~~~~~~~~l~~~~~~ 375 (450)
T 2y4t_A 360 ENDQQIREGLEKAQRL 375 (450)
T ss_dssp SSCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHH
Confidence 9999999988877654
No 92
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.43 E-value=1.5e-12 Score=89.56 Aligned_cols=103 Identities=12% Similarity=0.085 Sum_probs=85.3
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcH---HHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNE---QMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFL 77 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~---~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~ 77 (150)
.+|..++..|+|++|+..|+++++..|+++ .++..+|.+ ..+| ++.+|+ ..+.+.+...|++...
T Consensus 9 ~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~--------~~~~A~--~~~~~~l~~~P~~~~~- 77 (225)
T 2yhc_A 9 ATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNA--------DLPLAQ--AAIDRFIRLNPTHPNI- 77 (225)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTCTTH-
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcC--------CHHHHH--HHHHHHHHHCcCCCcH-
Confidence 478999999999999999999999999864 789999999 9999 778888 8888888888976441
Q ss_pred CChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHH------------------HhcCHHHHHHHHHHHHhhcCCCcchh
Q psy3020 78 SDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAAL------------------QANNFKEAIEAYSEAIKLDGTNHILF 139 (150)
Q Consensus 78 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~------------------~~~~~~~A~~~~~~al~~~p~~~~~~ 139 (150)
+.++..+|.+++ ..|++++|+..|+++++.+|+++.++
T Consensus 78 ------------------------~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~ 133 (225)
T 2yhc_A 78 ------------------------DYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTT 133 (225)
T ss_dssp ------------------------HHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHH
T ss_pred ------------------------HHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHH
Confidence 234444454444 47899999999999999999998765
No 93
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.43 E-value=2.5e-13 Score=108.16 Aligned_cols=118 Identities=11% Similarity=0.204 Sum_probs=99.5
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCC-
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSD- 79 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~- 79 (150)
++|.+|..+|++++|+.+|++||+++|++++++..+|.+ ..+| ++.+|+ ..+.+++.++|++...+..
T Consensus 48 nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g--------~~~~A~--~~~~kAl~l~P~~~~a~~~L 117 (723)
T 4gyw_A 48 NLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQ--------DVQGAL--QCYTRAIQINPAFADAHSNL 117 (723)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCCCCHHHHHHH
Confidence 689999999999999999999999999999999999999 9999 778888 8999999999998764211
Q ss_pred -------hHHHHHH----HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCC
Q psy3020 80 -------PSYVQMI----KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTN 135 (150)
Q Consensus 80 -------~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~ 135 (150)
+.+.+++ +.++.+|.. +.++.++|.++...|++++|++.|++++++.|+.
T Consensus 118 g~~~~~~g~~~eAi~~~~~Al~l~P~~------~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~~ 178 (723)
T 4gyw_A 118 ASIHKDSGNIPEAIASYRTALKLKPDF------PDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQ 178 (723)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSCC------HHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCC------hHHHhhhhhHHHhcccHHHHHHHHHHHHHhChhH
Confidence 1122222 224556666 8999999999999999999999999999998864
No 94
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.42 E-value=2.8e-13 Score=94.45 Aligned_cols=108 Identities=20% Similarity=0.116 Sum_probs=93.7
Q ss_pred hHHHHhhCCHHHHHHHHHHhhcc----CCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCC
Q psy3020 4 YSCLSYLGRYKESISTYEEGLKL----DPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLS 78 (150)
Q Consensus 4 g~~~~~~~~~~~A~~~~~~aL~~----~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~ 78 (150)
+..+...|++++|+..|+++++. +|+++.++..+|.+ ...| ++.+|+ ..+.+++..+|++
T Consensus 12 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------~~~~A~--~~~~~al~~~~~~----- 76 (275)
T 1xnf_A 12 AVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLG--------LRALAR--NDFSQALAIRPDM----- 76 (275)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCCCC-----
T ss_pred eeccCccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcc--------cHHHHH--HHHHHHHHcCCCc-----
Confidence 33455678999999999999998 45678899999999 8999 667777 7777777777753
Q ss_pred ChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 79 DPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 79 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+..|..+|.++...|++++|+++|.++++++|+++.+++++|.+|..+
T Consensus 77 -----------------------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~ 124 (275)
T 1xnf_A 77 -----------------------PEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYG 124 (275)
T ss_dssp -----------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHT
T ss_pred -----------------------HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHh
Confidence 678999999999999999999999999999999999999999999875
No 95
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.41 E-value=1e-12 Score=101.46 Aligned_cols=102 Identities=11% Similarity=-0.008 Sum_probs=75.8
Q ss_pred hCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHH
Q psy3020 10 LGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKE 88 (150)
Q Consensus 10 ~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 88 (150)
.|++++|+..|+++++++|++..++..+|.+ ...| ++.+|+ ..+.+++..+|++
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g--------~~~~A~--~~~~~al~~~p~~--------------- 56 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMG--------DTTAGE--MAVQRGLALHPGH--------------- 56 (568)
T ss_dssp -------------------CCHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHTTSTTC---------------
T ss_pred CccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCCCC---------------
Confidence 4789999999999999999999999999999 8889 777888 7888888888754
Q ss_pred HhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 89 IQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 89 l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+.++..+|.++...|++++|+++|+++++++|+++.+++++|.+|..+
T Consensus 57 -------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 104 (568)
T 2vsy_A 57 -------------PEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDA 104 (568)
T ss_dssp -------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred -------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc
Confidence 678999999999999999999999999999999999999999999875
No 96
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.41 E-value=1.3e-12 Score=97.96 Aligned_cols=60 Identities=5% Similarity=-0.097 Sum_probs=49.6
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhcc---------CCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKL---------DPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDP 71 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~---------~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~ 71 (150)
.+|.++...|++++|++.|++|+++ +|+....+..+|.+ ..+| ++.+|. ..+.+++.+.+
T Consensus 56 ~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g--------~~~~A~--~~~~ka~~i~~ 125 (472)
T 4g1t_A 56 LLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMG--------RLSDVQ--IYVDKVKHVCE 125 (472)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcC--------ChHHHH--HHHHHHHHHhH
Confidence 4799999999999999999999987 78888899999999 9999 666666 55555554443
No 97
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.40 E-value=7.2e-12 Score=84.57 Aligned_cols=132 Identities=8% Similarity=0.048 Sum_probs=100.0
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-Hhh-hhccCCCCCchhhhhCChHHHHhhc--cCCCCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQ-EMNDMNRGDPFANLFSDPNIFVQLQ--LDPRTKPFL 77 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~-g~~~~~~~~~~~~a~~~~~~~~~l~--~~~~~~~~~ 77 (150)
.+|.++...|++++|++.|+++++++|++..++..++.+ ... | ++.+++ ..+.+.+. ..|......
T Consensus 47 ~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~--------~~~~A~--~~~~~~~~~~~~~~~~~~~ 116 (225)
T 2vq2_A 47 VRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLN--------RPAESM--AYFDKALADPTYPTPYIAN 116 (225)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC--------CHHHHH--HHHHHHHTSTTCSCHHHHH
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcC--------cHHHHH--HHHHHHHcCcCCcchHHHH
Confidence 478999999999999999999999999999999999999 888 8 666777 66666666 333322210
Q ss_pred --------CChHHHHH---H-HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC-CCcchhhcHHH
Q psy3020 78 --------SDPSYVQM---I-KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDG-TNHILFSNRSA 144 (150)
Q Consensus 78 --------~~~~~~~~---~-~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~n~a~ 144 (150)
....+... + ..+...|.. +..+..+|.++...|++++|++.|+++++.+| +++..+..++.
T Consensus 117 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 190 (225)
T 2vq2_A 117 LNKGICSAKQGQFGLAEAYLKRSLAAQPQF------PPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWK 190 (225)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------chHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 00011111 1 113334433 78899999999999999999999999999999 99988887777
Q ss_pred HHHhc
Q psy3020 145 AFAKA 149 (150)
Q Consensus 145 ~~~~~ 149 (150)
++...
T Consensus 191 ~~~~~ 195 (225)
T 2vq2_A 191 IAKAL 195 (225)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 76543
No 98
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.39 E-value=5.1e-12 Score=97.16 Aligned_cols=132 Identities=11% Similarity=-0.014 Sum_probs=94.6
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCC---
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFL--- 77 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~--- 77 (150)
.++.++...|++++|+..|+++++.+|+++.++..++.+ ...| ++.+|. ..+.+.+..+|++....
T Consensus 344 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g--------~~~~A~--~~~~~~~~~~~~~~~~~~~l 413 (597)
T 2xpi_A 344 LHLASLHESGEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVN--------KISEAR--RYFSKSSTMDPQFGPAWIGF 413 (597)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHhc--------cHHHHH--HHHHHHHHhCCCCHHHHHHH
Confidence 467788888888888888888888888888888888887 7777 556666 66666666777654321
Q ss_pred -------CCh-HHHHHHHH-HhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 78 -------SDP-SYVQMIKE-IQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 78 -------~~~-~~~~~~~~-l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
.+. .....+.. +...|.. ...|..+|.++.+.|++++|++.|+++++++|+++..|.++|.+|.+
T Consensus 414 ~~~~~~~g~~~~A~~~~~~~~~~~~~~------~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 487 (597)
T 2xpi_A 414 AHSFAIEGEHDQAISAYTTAARLFQGT------HLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFN 487 (597)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHTTTTC------SHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCccc------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 000 01111111 2233333 77888899999999999999999999999999999999999888876
Q ss_pred c
Q psy3020 149 A 149 (150)
Q Consensus 149 ~ 149 (150)
.
T Consensus 488 ~ 488 (597)
T 2xpi_A 488 K 488 (597)
T ss_dssp T
T ss_pred h
Confidence 4
No 99
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.39 E-value=1.1e-11 Score=93.31 Aligned_cols=137 Identities=18% Similarity=0.133 Sum_probs=98.1
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCC---
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFL--- 77 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~--- 77 (150)
.+|.++...|++++|+..|+++++++|+++.++..+|.+ ..+| .+.+|+ ..+.+.+...|......
T Consensus 44 ~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g--------~~~~A~--~~~~~~~~~~~~~~~~~~~~ 113 (514)
T 2gw1_A 44 NLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRASANEGLG--------KFADAM--FDLSVLSLNGDFNDASIEPM 113 (514)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHSSSCCGGGTHHH
T ss_pred hHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHh--------hHHHHH--HHHHHHHhcCCCccchHHHH
Confidence 478999999999999999999999999999999999999 8888 556666 66666665555321110
Q ss_pred --------------------------------------------------------------------------------
Q psy3020 78 -------------------------------------------------------------------------------- 77 (150)
Q Consensus 78 -------------------------------------------------------------------------------- 77 (150)
T Consensus 114 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (514)
T 2gw1_A 114 LERNLNKQAMSKLKEKFGDIDTATATPTELSTQPAKERKDKQENLPSVTSMASFFGIFKPELTFANYDESNEADKELMNG 193 (514)
T ss_dssp HHHHHHHHHHHHHTTC---------------------------CCCCHHHHHHHHTTSCCCCCCSSCCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhhHHHhhccCCchhHHHHHHHhhcCHHHHHHHhcCCcHHHHHHHHH
Confidence
Q ss_pred -------CChHHHHHHHHHh-----------cCcchhhh-HHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcch
Q psy3020 78 -------SDPSYVQMIKEIQ-----------KDPSLMTL-EAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHIL 138 (150)
Q Consensus 78 -------~~~~~~~~~~~l~-----------~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 138 (150)
....+...+..+. ..|..... +..+..+..+|.++...|++++|+..|+++++.+|+ +.+
T Consensus 194 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~~~-~~~ 272 (514)
T 2gw1_A 194 LSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFLKNDPLGAHEDIKKAIELFPR-VNS 272 (514)
T ss_dssp HHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHCCC-HHH
T ss_pred HHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc-HHH
Confidence 0111222211111 12221110 233788889999999999999999999999999999 999
Q ss_pred hhcHHHHHHhc
Q psy3020 139 FSNRSAAFAKA 149 (150)
Q Consensus 139 ~~n~a~~~~~~ 149 (150)
++++|.+|..+
T Consensus 273 ~~~l~~~~~~~ 283 (514)
T 2gw1_A 273 YIYMALIMADR 283 (514)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHHHHC
Confidence 99999988764
No 100
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.38 E-value=5.6e-12 Score=95.63 Aligned_cols=103 Identities=12% Similarity=0.133 Sum_probs=77.6
Q ss_pred cHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCC----------CCC-hHHHHHH-HHHhcCcchh
Q psy3020 30 NEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPF----------LSD-PSYVQMI-KEIQKDPSLM 96 (150)
Q Consensus 30 ~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~----------~~~-~~~~~~~-~~l~~~~~~~ 96 (150)
...++..++.+ ...| ++.+++ ..+.+.+..+|+ ... ..+ ......+ ..+...|..
T Consensus 242 ~~~~~~~~g~~~~~~~--------~~~~A~--~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~- 309 (537)
T 3fp2_A 242 AALALCYTGIFHFLKN--------NLLDAQ--VLLQESINLHPT-PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEY- 309 (537)
T ss_dssp HHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCCC-HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTC-
T ss_pred HHHHHHHHHHHHHhcc--------cHHHHH--HHHHHHHhcCCC-chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCC-
Confidence 35567788888 7888 667777 788888888887 321 111 1111222 123445544
Q ss_pred hhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 97 TLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+..+..+|.++...|++++|++.|+++++++|+++.+++++|.++..+
T Consensus 310 -----~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~ 357 (537)
T 3fp2_A 310 -----PPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQ 357 (537)
T ss_dssp -----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHT
T ss_pred -----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 889999999999999999999999999999999999999999999865
No 101
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.36 E-value=1.4e-11 Score=92.74 Aligned_cols=130 Identities=12% Similarity=0.039 Sum_probs=75.0
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCC---
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFL--- 77 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~--- 77 (150)
.+|.++...|++++|+..|+++++.+|+ +.++..++.+ ...| .+.+++ ..+.+.+..+|++...+
T Consensus 242 ~~~~~~~~~~~~~~A~~~~~~~l~~~~~-~~~~~~l~~~~~~~~--------~~~~A~--~~~~~~~~~~~~~~~~~~~l 310 (514)
T 2gw1_A 242 HTGIFKFLKNDPLGAHEDIKKAIELFPR-VNSYIYMALIMADRN--------DSTEYY--NYFDKALKLDSNNSSVYYHR 310 (514)
T ss_dssp HHHHHHHHSSCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHTSS--------CCTTGG--GHHHHHHTTCTTCTHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhhCcc-HHHHHHHHHHHHHCC--------CHHHHH--HHHHHHhhcCcCCHHHHHHH
Confidence 3677777888888888888888888888 7777777777 7777 444555 55556666666554321
Q ss_pred -------CC-hHHHHHH-HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 78 -------SD-PSYVQMI-KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 78 -------~~-~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
.+ ......+ ..+...|.. +..+..+|.++...|++++|+..|+++++.+|+++.+++++|.++..
T Consensus 311 ~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 384 (514)
T 2gw1_A 311 GQMNFILQNYDQAGKDFDKAKELDPEN------IFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTD 384 (514)
T ss_dssp HHHHHHTTCTTHHHHHHHHHHHTCSSC------SHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhChhh------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHH
Confidence 00 0011111 112223332 44555555555555666666666666666666555555555555544
No 102
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.35 E-value=6.6e-12 Score=96.56 Aligned_cols=109 Identities=10% Similarity=0.055 Sum_probs=88.8
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhcc------CCCc-HHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKL------DPNN-EQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRT 73 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~------~p~~-~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~ 73 (150)
.+|.+|...|++++|++.|++++++ +|++ ..++..++.+ ...| ++.+|. ..+.+.+..+|++
T Consensus 480 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g--------~~~~A~--~~~~~~~~~~p~~ 549 (597)
T 2xpi_A 480 ELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLK--------MYDAAI--DALNQGLLLSTND 549 (597)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHSSCC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhc--------CHHHHH--HHHHHHHHhCCCC
Confidence 4677888888888888888888887 6665 7788888888 7777 556666 5555555555532
Q ss_pred CCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 74 KPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 74 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
+..|..+|.++...|++++|++.|+++++++|+++..+.+++.+|..
T Consensus 550 ----------------------------~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~ 596 (597)
T 2xpi_A 550 ----------------------------ANVHTAIALVYLHKKIPGLAITHLHESLAISPNEIMASDLLKRALEE 596 (597)
T ss_dssp ----------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTC-
T ss_pred ----------------------------hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHhc
Confidence 77899999999999999999999999999999999999999988753
No 103
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.35 E-value=1.7e-11 Score=87.93 Aligned_cols=131 Identities=8% Similarity=-0.028 Sum_probs=79.9
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHH-HHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCC--
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQ-MKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFL-- 77 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~-a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~-- 77 (150)
.+|..+...|++++|...|+++|+++|+++. +|..++.+ ...| .+.+|. ..+.+++...|......
T Consensus 104 ~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~--------~~~~A~--~~~~~a~~~~p~~~~~~~~ 173 (308)
T 2ond_A 104 AYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAE--------GIKSGR--MIFKKAREDARTRHHVYVT 173 (308)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHH--------CHHHHH--HHHHHHHTSTTCCTHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhc--------CHHHHH--HHHHHHHhcCCCCHHHHHH
Confidence 3566777777777777778887777777775 77777777 6666 555566 66666666666543210
Q ss_pred ---------CChH-HHHHH-HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhh---cCC-CcchhhcH
Q psy3020 78 ---------SDPS-YVQMI-KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKL---DGT-NHILFSNR 142 (150)
Q Consensus 78 ---------~~~~-~~~~~-~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~---~p~-~~~~~~n~ 142 (150)
.+.. ....+ ..+...|.. +..|..+|..+...|++++|...|+++++. +|+ +..+|...
T Consensus 174 ~a~~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~ 247 (308)
T 2ond_A 174 AALMEYYCSKDKSVAFKIFELGLKKYGDI------PEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARF 247 (308)
T ss_dssp HHHHHHHTSCCHHHHHHHHHHHHHHHTTC------HHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHH
Confidence 0000 00000 112222322 677777777777778888888888888774 443 55666666
Q ss_pred HHHHHh
Q psy3020 143 SAAFAK 148 (150)
Q Consensus 143 a~~~~~ 148 (150)
+..+.+
T Consensus 248 ~~~~~~ 253 (308)
T 2ond_A 248 LAFESN 253 (308)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665543
No 104
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.35 E-value=2.2e-11 Score=75.51 Aligned_cols=96 Identities=27% Similarity=0.425 Sum_probs=82.5
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.++...|++++|+..|+++++.+|+++.++..++.+ ...| ++.+++ ..+...+...|..
T Consensus 40 ~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------~~~~A~--~~~~~~~~~~~~~------- 102 (136)
T 2fo7_A 40 NLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQG--------DYDEAI--EYYQKALELDPRS------- 102 (136)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT--------CHHHHH--HHHHHHHHHCTTC-------
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhc--------CHHHHH--HHHHHHHHhCCCC-------
Confidence 478899999999999999999999999999999999999 8888 566666 5555555555532
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCC
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTN 135 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~ 135 (150)
...+..+|.++...|++++|+..|.+++.++|++
T Consensus 103 ---------------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 103 ---------------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp ---------------------HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred ---------------------hHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 5678889999999999999999999999999964
No 105
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.32 E-value=4.5e-12 Score=88.20 Aligned_cols=116 Identities=13% Similarity=0.161 Sum_probs=93.4
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhcc--------CCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKL--------DPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPR 72 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~--------~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~ 72 (150)
.+|.++...|++++|+..|++++++ +|....++..+|.+ ...| ++.+|+ ..+.+++...
T Consensus 48 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g--------~~~~A~--~~~~~al~~~-- 115 (283)
T 3edt_B 48 ILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRG--------KYKEAE--PLCKRALEIR-- 115 (283)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTT--------CHHHHH--HHHHHHHHHH--
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhc--------cHHHHH--HHHHHHHHHH--
Confidence 5899999999999999999999988 57778889999999 8888 566666 5554444321
Q ss_pred CCCCCCChHHHHHHHHH--hcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhh--------cCCCcchhhcH
Q psy3020 73 TKPFLSDPSYVQMIKEI--QKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKL--------DGTNHILFSNR 142 (150)
Q Consensus 73 ~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~n~ 142 (150)
... ...|. ...++..+|.+++..|++++|+++|++++++ +|....++.++
T Consensus 116 --------------~~~~~~~~~~------~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l 175 (283)
T 3edt_B 116 --------------EKVLGKFHPD------VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNL 175 (283)
T ss_dssp --------------HHHHCTTCHH------HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHH
T ss_pred --------------HHHcCCCChH------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 111 01122 2788999999999999999999999999999 88888999999
Q ss_pred HHHHHhc
Q psy3020 143 SAAFAKA 149 (150)
Q Consensus 143 a~~~~~~ 149 (150)
|.+|..+
T Consensus 176 a~~~~~~ 182 (283)
T 3edt_B 176 ASCYLKQ 182 (283)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 9999865
No 106
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.31 E-value=1.6e-11 Score=74.55 Aligned_cols=94 Identities=12% Similarity=0.076 Sum_probs=72.2
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.++...|++++|+..|+++++++|+++.++..+|.+ ..+| ++.+|+ ..+.+++.++|++....
T Consensus 9 ~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g--------~~~~A~--~~~~~al~~~p~~~~~~--- 75 (111)
T 2l6j_A 9 EQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLG--------EYTQAI--QMCQQGLRYTSTAEHVA--- 75 (111)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHTSCSSTTSHH---
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhc--------CHHHHH--HHHHHHHHhCCCccHHH---
Confidence 478899999999999999999999999999998888888 8888 667777 77777888887652210
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHH
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSE 127 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ 127 (150)
.....+..+|.++...|++++|++.+.+
T Consensus 76 -------------------~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 76 -------------------IRSKLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp -------------------HHHHHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred -------------------HHHHHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 0155677788888888877777665543
No 107
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.30 E-value=1.9e-11 Score=76.26 Aligned_cols=84 Identities=13% Similarity=0.097 Sum_probs=74.4
Q ss_pred CCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHH
Q psy3020 28 PNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLK 106 (150)
Q Consensus 28 p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 106 (150)
|..++.+..+|.. ...| ++.+|+ ..+.+++..+|++ +..|.
T Consensus 1 p~~a~~~~~~g~~~~~~~--------~~~~A~--~~~~~al~~~p~~----------------------------~~~~~ 42 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKS--------DWPNAV--KAYTEMIKRAPED----------------------------ARGYS 42 (126)
T ss_dssp CHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC----------------------------HHHHH
T ss_pred CchHHHHHHHHHHHHHhc--------CHHHHH--HHHHHHHHhCCCC----------------------------hHHHH
Confidence 5567888899998 8888 777888 7787778777754 67899
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 107 DKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 107 ~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
.+|.+++..|++++|+.+|+++++++|+++.+|+++|.++..+
T Consensus 43 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 85 (126)
T 3upv_A 43 NRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAV 85 (126)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999875
No 108
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.29 E-value=1.4e-12 Score=95.04 Aligned_cols=118 Identities=14% Similarity=0.157 Sum_probs=99.3
Q ss_pred hhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHH
Q psy3020 9 YLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIK 87 (150)
Q Consensus 9 ~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 87 (150)
.++++++|++.|+++++.+|+++.++..+|.+ ...| ++.+|+ ..+.+++.++|+...... .....
T Consensus 125 ~L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g--------~~~~A~--~~y~~Al~~~p~~~~~~~--~~~~~-- 190 (336)
T 1p5q_A 125 HLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEG--------KYKQAL--LQYKKIVSWLEYESSFSN--EEAQK-- 190 (336)
T ss_dssp EEEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHHHTTTCCCCCS--HHHHH--
T ss_pred EEeecccccchhcCCHHHHHHHHHHHHHHHHHHHHCC--------CHHHHH--HHHHHHHHHhhccccCCh--HHHHH--
Confidence 56778889999999999999999999999999 9999 778888 899999999998764321 10000
Q ss_pred HHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 88 EIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 88 ~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
..+ ....+|.++|.++.+.|+|++|+.+|+++++++|+++.+|+++|.+|..+
T Consensus 191 ---~~~------~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~ 243 (336)
T 1p5q_A 191 ---AQA------LRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAV 243 (336)
T ss_dssp ---HHH------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred ---HHH------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHC
Confidence 011 22789999999999999999999999999999999999999999999875
No 109
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.29 E-value=2.6e-11 Score=86.73 Aligned_cols=128 Identities=9% Similarity=0.046 Sum_probs=87.1
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhcc--CCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCC-
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKL--DPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFL- 77 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~--~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~- 77 (150)
.++..+...+++++|++.+++++.. +|+++.++..+|.+ ...| ++.+|+ ..+.+ |++...+
T Consensus 70 ~la~~~~~~~~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g--------~~~~Al--~~l~~-----~~~~~~~~ 134 (291)
T 3mkr_A 70 MFAEYLASHSRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQ--------NPDAAL--RTLHQ-----GDSLECMA 134 (291)
T ss_dssp HHHHHHHCSTTHHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTT--------CHHHHH--HHHTT-----CCSHHHHH
T ss_pred HHHHHHcCCCcHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCC--------CHHHHH--HHHhC-----CCCHHHHH
Confidence 4678899999999999999999875 69999999999999 8889 556666 33332 4333211
Q ss_pred ---------CCh-HHHHHHHH-HhcCcchhhhHHHhHHHHHHH--HHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHH
Q psy3020 78 ---------SDP-SYVQMIKE-IQKDPSLMTLEAKISLLKDKG--NAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSA 144 (150)
Q Consensus 78 ---------~~~-~~~~~~~~-l~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~ 144 (150)
.+. .....++. +..+|.. .......+ ..+...|++++|+..|+++++.+|+++.+++++|.
T Consensus 135 ~l~~~~~~~g~~~~A~~~l~~~~~~~p~~------~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~ 208 (291)
T 3mkr_A 135 MTVQILLKLDRLDLARKELKKMQDQDEDA------TLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAA 208 (291)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhhCcCc------HHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 110 01111111 2223322 21111122 22334589999999999999999999999999999
Q ss_pred HHHhcC
Q psy3020 145 AFAKAI 150 (150)
Q Consensus 145 ~~~~~~ 150 (150)
++.+++
T Consensus 209 ~~~~~g 214 (291)
T 3mkr_A 209 CHMAQG 214 (291)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 998763
No 110
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.28 E-value=6.2e-11 Score=72.87 Aligned_cols=86 Identities=15% Similarity=0.175 Sum_probs=75.7
Q ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcC
Q psy3020 14 KESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKD 92 (150)
Q Consensus 14 ~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 92 (150)
++|+..|+++++++|+++.++..+|.+ ...| ++.+|+ ..+.+++..+|+.
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g--------~~~~A~--~~~~~al~~~p~~------------------- 52 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHE--------QFDAAL--PHLRAALDFDPTY------------------- 52 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC-------------------
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcc--------CHHHHH--HHHHHHHHHCCCc-------------------
Confidence 368999999999999999999999999 9999 677787 7777777777753
Q ss_pred cchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcc
Q psy3020 93 PSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHI 137 (150)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~ 137 (150)
+.+|..+|.++...|++++|+..|+++++++|++..
T Consensus 53 ---------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 88 (115)
T 2kat_A 53 ---------SVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGD 88 (115)
T ss_dssp ---------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC
T ss_pred ---------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcccccc
Confidence 678999999999999999999999999999996543
No 111
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.27 E-value=7.7e-12 Score=89.22 Aligned_cols=115 Identities=8% Similarity=0.037 Sum_probs=91.0
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCC------cHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCC
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPN------NEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKP 75 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~------~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~ 75 (150)
.|.+|...|+|++|+++|++|+++.+. .+.++..+|.+ ..+| ++.+|+ ..+.+++.+.|+...
T Consensus 43 a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g--------~~~~A~--~~~~~Al~l~~~~g~ 112 (292)
T 1qqe_A 43 AATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGG--------NSVNAV--DSLENAIQIFTHRGQ 112 (292)
T ss_dssp HHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCC--------CHHHHH--HHHHHHHHHHHHcCC
Confidence 477899999999999999999998542 25688899999 8999 667777 667666665543211
Q ss_pred CCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHh-cCHHHHHHHHHHHHhhcCCC------cchhhcHHHHHHh
Q psy3020 76 FLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQA-NNFKEAIEAYSEAIKLDGTN------HILFSNRSAAFAK 148 (150)
Q Consensus 76 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~A~~~~~~al~~~p~~------~~~~~n~a~~~~~ 148 (150)
.. ..+..+.++|.++... |++++|+++|++|+++.|++ ..++.++|.+|..
T Consensus 113 ------~~----------------~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~ 170 (292)
T 1qqe_A 113 ------FR----------------RGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKAL 170 (292)
T ss_dssp ------HH----------------HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ------HH----------------HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH
Confidence 00 1167899999999996 99999999999999999975 4678899999887
Q ss_pred c
Q psy3020 149 A 149 (150)
Q Consensus 149 ~ 149 (150)
+
T Consensus 171 ~ 171 (292)
T 1qqe_A 171 D 171 (292)
T ss_dssp T
T ss_pred h
Confidence 5
No 112
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.26 E-value=3.8e-11 Score=85.47 Aligned_cols=114 Identities=11% Similarity=0.089 Sum_probs=86.1
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCc------HHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhc---cCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNN------EQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQ---LDP 71 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~------~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~---~~~ 71 (150)
.+|.++...|++++|+..|++++++.+.. ..++..+|.+ ..+| ++.+|+ ..+.+++. ..|
T Consensus 120 ~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~--------~~~~A~--~~~~kal~~~~~~~ 189 (293)
T 2qfc_A 120 YVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENG--------YLKKGI--DLFEQILKQLEALH 189 (293)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHHHSC
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHHHHhcC
Confidence 36778888899999999999999876544 5578888888 8888 566666 55544442 222
Q ss_pred CCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCC------cchhhcHHHH
Q psy3020 72 RTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTN------HILFSNRSAA 145 (150)
Q Consensus 72 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~n~a~~ 145 (150)
+... ....++.++|.++...|+|++|+++|++++++.++. +.+|+++|.+
T Consensus 190 ~~~~------------------------~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~ 245 (293)
T 2qfc_A 190 DNEE------------------------FDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGEC 245 (293)
T ss_dssp CCHH------------------------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHH
T ss_pred cccc------------------------chHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 1100 014689999999999999999999999999987642 6788999999
Q ss_pred HHhc
Q psy3020 146 FAKA 149 (150)
Q Consensus 146 ~~~~ 149 (150)
|..+
T Consensus 246 y~~~ 249 (293)
T 2qfc_A 246 LRKL 249 (293)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 9875
No 113
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.26 E-value=1.3e-11 Score=90.64 Aligned_cols=116 Identities=9% Similarity=0.028 Sum_probs=79.6
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCC-------CcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDP-------NNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRT 73 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p-------~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~ 73 (150)
.+|.+|...|++++|+..|++|+++.+ ..+.++..+|.+ ..+| ++.+|+ ..+.+++.+.+..
T Consensus 148 ~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g--------~~~~A~--~~~~~al~~~~~~ 217 (383)
T 3ulq_A 148 KMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLK--------QYEDAI--SHFQKAYSMAEAE 217 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhc--------CHHHHH--HHHHHHHHHHHHc
Confidence 589999999999999999999999844 344578889999 8888 667777 6666666554432
Q ss_pred CCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHh-----hc-CCCcchhhcHHHHHH
Q psy3020 74 KPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIK-----LD-GTNHILFSNRSAAFA 147 (150)
Q Consensus 74 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~-----~~-p~~~~~~~n~a~~~~ 147 (150)
.. .+ ....++.++|.++...|++++|+++|+++++ .+ |..+.+++++|.+|.
T Consensus 218 ~~----------------~~------~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~ 275 (383)
T 3ulq_A 218 KQ----------------PQ------LMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHY 275 (383)
T ss_dssp TC----------------HH------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHH
T ss_pred CC----------------hH------HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHH
Confidence 21 00 1145566666666666666666666666666 34 555666666666665
Q ss_pred hc
Q psy3020 148 KA 149 (150)
Q Consensus 148 ~~ 149 (150)
.+
T Consensus 276 ~~ 277 (383)
T 3ulq_A 276 KL 277 (383)
T ss_dssp HT
T ss_pred HC
Confidence 53
No 114
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.23 E-value=2.7e-11 Score=84.17 Aligned_cols=98 Identities=15% Similarity=0.195 Sum_probs=77.7
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhcc--------CCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKL--------DPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPR 72 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~--------~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~ 72 (150)
.+|.++...|++++|+..|++++++ +|....++..+|.+ ..+| ++.+|+ ..+.+++...
T Consensus 90 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g--------~~~~A~--~~~~~al~~~-- 157 (283)
T 3edt_B 90 NLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQG--------KAEEVE--YYYRRALEIY-- 157 (283)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTT--------CHHHHH--HHHHHHHHHH--
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHHH--
Confidence 5899999999999999999999998 67888899999999 9999 556666 5554444321
Q ss_pred CCCCCCChHHHHHHHHH--hcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Q psy3020 73 TKPFLSDPSYVQMIKEI--QKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKL 131 (150)
Q Consensus 73 ~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 131 (150)
... ...| .....+..+|.++...|++++|+++|.+++++
T Consensus 158 --------------~~~~~~~~~------~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 158 --------------ATRLGPDDP------NVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp --------------HHHSCTTCH------HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred --------------HHhcCCCCH------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 000 0122 22788999999999999999999999999987
No 115
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.23 E-value=3.7e-11 Score=85.49 Aligned_cols=116 Identities=12% Similarity=0.113 Sum_probs=77.2
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCCc------HHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCC
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPNN------EQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKP 75 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~~------~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~ 75 (150)
+|.++...+++++|+..|++||++.+.. ..++..+|.+ ..+| ++.+|+ ..+.+++....
T Consensus 121 l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g--------~~~~A~--~~~~~al~~~~---- 186 (293)
T 3u3w_A 121 VAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENG--------YLKKGI--DLFEQILKQLE---- 186 (293)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHH----
T ss_pred HHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHHHH----
Confidence 5666666667777777777777654332 2246666666 6666 444554 33333332111
Q ss_pred CCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCC------cchhhcHHHHHHhc
Q psy3020 76 FLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTN------HILFSNRSAAFAKA 149 (150)
Q Consensus 76 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~n~a~~~~~~ 149 (150)
..... .+.....+.++|.++...|+|++|++++++++++.+.. +.+|+++|.+|..+
T Consensus 187 ------------~~~~~-----~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~ 249 (293)
T 3u3w_A 187 ------------ALHDN-----EEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKL 249 (293)
T ss_dssp ------------HSSCC-----HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHT
T ss_pred ------------hcccc-----hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHh
Confidence 01000 00226789999999999999999999999999998765 67899999999875
No 116
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.22 E-value=8.1e-11 Score=76.78 Aligned_cols=87 Identities=11% Similarity=0.061 Sum_probs=77.0
Q ss_pred ccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhH
Q psy3020 25 KLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKIS 103 (150)
Q Consensus 25 ~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 103 (150)
..+|.++.++..+|.+ ...| ++.+|+ ..+.+++.++|++ +.
T Consensus 5 ~~~~~~a~~~~~~g~~~~~~g--------~~~~A~--~~~~~al~~~p~~----------------------------~~ 46 (164)
T 3sz7_A 5 MAPTPESDKLKSEGNAAMARK--------EYSKAI--DLYTQALSIAPAN----------------------------PI 46 (164)
T ss_dssp SSCCHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHSTTC----------------------------HH
T ss_pred chhhhhHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCCcC----------------------------HH
Confidence 3466788899999999 8888 777888 7788888877753 77
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 104 LLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 104 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
.|..+|.+++..|++++|+.+|+++++++|+++.+|+++|.+|..+
T Consensus 47 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 92 (164)
T 3sz7_A 47 YLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFDM 92 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 8999999999999999999999999999999999999999999875
No 117
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.22 E-value=3.6e-11 Score=85.46 Aligned_cols=126 Identities=9% Similarity=0.070 Sum_probs=94.6
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
++|.+|...|++++|+..|+++++++|+++.++..+|.+ ..+| ++.+|+ ..+.+++.++|++...+...
T Consensus 43 ~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g--------~~~~A~--~~~~~al~l~p~~~~~~~~~ 112 (281)
T 2c2l_A 43 NRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEME--------SYDEAI--ANLQRAYSLAKEQRLNFGDD 112 (281)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHHHTTCCCCSH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCccchhhHHHH
Confidence 589999999999999999999999999999999999999 9999 778888 88888899999876544321
Q ss_pred HHHHHHHH----------HhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHH
Q psy3020 81 SYVQMIKE----------IQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAF 146 (150)
Q Consensus 81 ~~~~~~~~----------l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~ 146 (150)
....+.. ....+.. ......++... .|++++|++.|+++++++|++......++..+
T Consensus 113 -~~~~~~~~~~~~~~~~~~~~~~~~------~~i~~~l~~l~--~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 179 (281)
T 2c2l_A 113 -IPSALRIAKKKRWNSIEERRIHQE------SELHSYLTRLI--AAERERELEECQRNHEGHEDDGHIRAQQACIE 179 (281)
T ss_dssp -HHHHHHHHHHHHHHHHHHTCCCCC------CHHHHHHHHHH--HHHHHHHHTTTSGGGTTTSCHHHHTHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhhh------HHHHHHHHHHH--HHHHHHHHHHHHhhhccccchhhhhhHHHHHH
Confidence 1111100 1112212 44445555543 79999999999999999999877766655444
No 118
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.22 E-value=1.8e-11 Score=73.21 Aligned_cols=90 Identities=16% Similarity=0.224 Sum_probs=76.1
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHH-HHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQ-MKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSD 79 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~-a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~ 79 (150)
..|.++...|++++|+..|+++++++|+++. ++..+|.+ ..+| ++.+|+ ..+.+++.++|++..
T Consensus 5 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~--------~~~~A~--~~~~~al~~~p~~~~---- 70 (99)
T 2kc7_A 5 KTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLG--------DWQKAL--NNYQSAIELNPDSPA---- 70 (99)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHHHCTTSTH----
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHhcCCCcHH----
Confidence 5789999999999999999999999999999 99999999 8888 677888 888888888886533
Q ss_pred hHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcc
Q psy3020 80 PSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHI 137 (150)
Q Consensus 80 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~ 137 (150)
++.. +.+.+++..|++++..+|+++.
T Consensus 71 ------------------------~~~~--------~~~~~a~~~~~~~~~~~p~~~~ 96 (99)
T 2kc7_A 71 ------------------------LQAR--------KMVMDILNFYNKDMYNQLEHHH 96 (99)
T ss_dssp ------------------------HHHH--------HHHHHHHHHHCCTTHHHHCCSS
T ss_pred ------------------------HHHH--------HHHHHHHHHHHHHhccCccccc
Confidence 2211 6778899999999999998764
No 119
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.22 E-value=1.5e-10 Score=72.82 Aligned_cols=87 Identities=9% Similarity=0.046 Sum_probs=75.6
Q ss_pred ccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhH
Q psy3020 25 KLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKIS 103 (150)
Q Consensus 25 ~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 103 (150)
..+|.++..+..+|.+ ...| ++.+|+ ..+.+++..+|++ +.
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~~--------~~~~A~--~~~~~al~~~~~~----------------------------~~ 44 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVGR--------KYPEAA--ACYGRAITRNPLV----------------------------AV 44 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC----------------------------HH
T ss_pred CCccccHHHHHHHHHHHHHhC--------cHHHHH--HHHHHHHhhCcCc----------------------------HH
Confidence 4678899999999999 8989 777887 7777777777753 67
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 104 LLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 104 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
.|..+|.+++..|++++|+.+|+++++++|+++.+++++|.+|..+
T Consensus 45 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 90 (137)
T 3q49_B 45 YYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEM 90 (137)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999875
No 120
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.22 E-value=1.2e-10 Score=68.06 Aligned_cols=86 Identities=27% Similarity=0.348 Sum_probs=72.0
Q ss_pred cCC-CcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhH
Q psy3020 26 LDP-NNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKIS 103 (150)
Q Consensus 26 ~~p-~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 103 (150)
++| +++.++..++.+ ...| ++.+|+ ..+.+++..+|++ +.
T Consensus 3 ~~~~~~~~~~~~la~~~~~~~--------~~~~A~--~~~~~a~~~~~~~----------------------------~~ 44 (91)
T 1na3_A 3 MDPGNSAEAWYNLGNAYYKQG--------DYDEAI--EYYQKALELDPNN----------------------------AE 44 (91)
T ss_dssp ---CHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC----------------------------HH
T ss_pred CcccccHHHHHHHHHHHHHcc--------CHHHHH--HHHHHHHhcCCCC----------------------------HH
Confidence 355 467889999999 8888 667777 7777777766643 67
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 104 LLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 104 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
.+..+|.++...|++++|+++|+++++++|+++.++.++|.++..+
T Consensus 45 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~ 90 (91)
T 1na3_A 45 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQ 90 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhc
Confidence 8899999999999999999999999999999999999999999875
No 121
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.21 E-value=7.8e-11 Score=91.56 Aligned_cols=110 Identities=16% Similarity=0.066 Sum_probs=95.6
Q ss_pred hHHHHhhCC----------HHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCC
Q psy3020 4 YSCLSYLGR----------YKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPR 72 (150)
Q Consensus 4 g~~~~~~~~----------~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~ 72 (150)
|.++..+++ ++++++.++++|+.+|.+..+|...+-+ ..++.. .+.+++ ..+.+.+..+|+
T Consensus 70 ~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~------~~~~el--~~~~k~l~~d~~ 141 (567)
T 1dce_A 70 REVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEP------NWAREL--ELCARFLEADER 141 (567)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSC------CHHHHH--HHHHHHHHHCTT
T ss_pred HHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccc------cHHHHH--HHHHHHHhhccc
Confidence 567777888 9999999999999999999999999999 887732 335666 677777777775
Q ss_pred CCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhc-CHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 73 TKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQAN-NFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 73 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+ ..+|..+|.+....| .+++++++++++++.+|.|..+|++|+.++..+
T Consensus 142 N----------------------------~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l 191 (567)
T 1dce_A 142 N----------------------------FHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 191 (567)
T ss_dssp C----------------------------HHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHH
T ss_pred c----------------------------ccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhh
Confidence 4 789999999999999 999999999999999999999999999998763
No 122
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.21 E-value=6.8e-11 Score=86.83 Aligned_cols=116 Identities=6% Similarity=-0.007 Sum_probs=93.0
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhcc---CC---CcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCC
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKL---DP---NNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKP 75 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~---~p---~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~ 75 (150)
.|.++...|++++|+..|++|+++ .| ..+.++..+|.+ ..+| ++..|+ ..+.+++.+.+....
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~--------~~~~A~--~~~~~al~~~~~~~~ 178 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMK--------QTYFSM--DYARQAYEIYKEHEA 178 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHHTCST
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHHHHhCcc
Confidence 789999999999999999999998 33 356788999999 8899 667777 666666655444321
Q ss_pred CCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCc------chhhcHHHHHHhc
Q psy3020 76 FLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNH------ILFSNRSAAFAKA 149 (150)
Q Consensus 76 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~------~~~~n~a~~~~~~ 149 (150)
. .+ ..+.++..+|.++...|++++|+++|.+++++.|... .+++|+|.+|..+
T Consensus 179 ~---------------~~------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~ 237 (383)
T 3ulq_A 179 Y---------------NI------RLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQ 237 (383)
T ss_dssp T---------------HH------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred c---------------hH------HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHC
Confidence 0 00 1277899999999999999999999999999987654 4899999999875
No 123
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.21 E-value=3.9e-12 Score=96.33 Aligned_cols=118 Identities=11% Similarity=0.070 Sum_probs=98.6
Q ss_pred hhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHH
Q psy3020 9 YLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIK 87 (150)
Q Consensus 9 ~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 87 (150)
.++++++|++.|+++++.+|+++.++..+|.+ ...| ++.+|+ ..+.+++.++|.+..+.. .....+
T Consensus 246 ~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g--------~~~~A~--~~y~~Al~~~p~~~~~~~--~~~~~~- 312 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGG--------KYMQAV--IQYGKIVSWLEMEYGLSE--KESKAS- 312 (457)
T ss_dssp EEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHTTCCSCCH--HHHHHH-
T ss_pred hhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCC--------CHHHHH--HHHHHHHHHhcccccCCh--HHHHHH-
Confidence 45677889999999999999999999999999 8899 778888 889999998888754321 111100
Q ss_pred HHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 88 EIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 88 ~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
.+ ....+|.++|.++++.|+|++|+.+|+++++++|+++.+|+++|.+|..+
T Consensus 313 ----~~------~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~ 364 (457)
T 1kt0_A 313 ----ES------FLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLM 364 (457)
T ss_dssp ----HH------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHT
T ss_pred ----HH------HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHc
Confidence 01 22789999999999999999999999999999999999999999999875
No 124
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.19 E-value=3.3e-10 Score=81.17 Aligned_cols=125 Identities=10% Similarity=0.075 Sum_probs=92.8
Q ss_pred hhCCH-------HHHHHHHHHhhc-cCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCC-CCC
Q psy3020 9 YLGRY-------KESISTYEEGLK-LDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKP-FLS 78 (150)
Q Consensus 9 ~~~~~-------~~A~~~~~~aL~-~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~-~~~ 78 (150)
..|++ ++|+..|++|++ ++|++..+|..++.+ ...| .+.+|. ..+.+++..+|++.. ...
T Consensus 69 ~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~--------~~~~A~--~~~~~al~~~p~~~~~~~~ 138 (308)
T 2ond_A 69 EKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRM--------KYEKVH--SIYNRLLAIEDIDPTLVYI 138 (308)
T ss_dssp HTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHTSSSSCTHHHHH
T ss_pred hccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcC--------CHHHHH--HHHHHHHhccccCccHHHH
Confidence 45775 999999999999 799999999999999 8888 667777 888889999997653 211
Q ss_pred C-hHHH-------H---HH-HHHhcCcchhhhHHHhHHHHHHHHHHHH-hcCHHHHHHHHHHHHhhcCCCcchhhcHHHH
Q psy3020 79 D-PSYV-------Q---MI-KEIQKDPSLMTLEAKISLLKDKGNAALQ-ANNFKEAIEAYSEAIKLDGTNHILFSNRSAA 145 (150)
Q Consensus 79 ~-~~~~-------~---~~-~~l~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~ 145 (150)
. ..+. . .+ +.+...|.. ...|...+...+. .|++++|+++|+++++++|+++.+|.++|..
T Consensus 139 ~~~~~~~~~~~~~~A~~~~~~a~~~~p~~------~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 212 (308)
T 2ond_A 139 QYMKFARRAEGIKSGRMIFKKAREDARTR------HHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDY 212 (308)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHTSTTCC------THHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 0 0010 1 11 112223322 5566655555443 6999999999999999999999999999998
Q ss_pred HHhc
Q psy3020 146 FAKA 149 (150)
Q Consensus 146 ~~~~ 149 (150)
+..+
T Consensus 213 ~~~~ 216 (308)
T 2ond_A 213 LSHL 216 (308)
T ss_dssp HHTT
T ss_pred HHHC
Confidence 8764
No 125
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.19 E-value=5.1e-11 Score=75.03 Aligned_cols=83 Identities=17% Similarity=0.328 Sum_probs=69.0
Q ss_pred CCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHH
Q psy3020 28 PNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLK 106 (150)
Q Consensus 28 p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 106 (150)
++.+.++..+|.+ ...| ++.+|+ ..+.+++.++|++ +.+|.
T Consensus 5 ~d~A~a~~~lG~~~~~~~--------~~~~A~--~~y~~Al~~~p~~----------------------------~~~~~ 46 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQK--------DFEKAH--VHYDKAIELDPSN----------------------------ITFYN 46 (127)
T ss_dssp HHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC----------------------------HHHHH
T ss_pred HHHHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCCCC----------------------------HHHHH
Confidence 3456678899999 8888 778888 8888888888864 67899
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhhcCCCcc-------hhhcHHHHHHh
Q psy3020 107 DKGNAALQANNFKEAIEAYSEAIKLDGTNHI-------LFSNRSAAFAK 148 (150)
Q Consensus 107 ~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~-------~~~n~a~~~~~ 148 (150)
++|.+++.+|+|++|++.|+++++++|++.. +|+++|.++..
T Consensus 47 nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~ 95 (127)
T 4gcn_A 47 NKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQK 95 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999875 45556666554
No 126
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.19 E-value=4.3e-10 Score=78.76 Aligned_cols=127 Identities=9% Similarity=-0.011 Sum_probs=89.3
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-Hh----hhhccCCCCCchhhhhCChHHHHhhccCCCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RN----QEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPF 76 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~----~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~ 76 (150)
.+|.++...|++++|+..|+++++ |+++.++..+|.+ .. .+ ++.+|+ ..+.+++... +...
T Consensus 11 ~lg~~~~~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~~--------~~~~A~--~~~~~a~~~~--~~~a 76 (273)
T 1ouv_A 11 GLGAKSYKEKDFTQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVEK--------NLKKAA--SFYAKACDLN--YSNG 76 (273)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCC--------CHHHHH--HHHHHHHHTT--CHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcCC--------CHHHHH--HHHHHHHHCC--CHHH
Confidence 579999999999999999999998 8889999999998 66 55 566666 6666665543 1110
Q ss_pred C--------C----ChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHH----hcCHHHHHHHHHHHHhhcCCCcchhh
Q psy3020 77 L--------S----DPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQ----ANNFKEAIEAYSEAIKLDGTNHILFS 140 (150)
Q Consensus 77 ~--------~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~ 140 (150)
. . ...+...+..+.+... ...+.++..+|.++.. .+++++|+++|+++++.+ ++.+++
T Consensus 77 ~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~----~~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~ 150 (273)
T 1ouv_A 77 CHLLGNLYYSGQGVSQNTNKALQYYSKACD----LKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCT 150 (273)
T ss_dssp HHHHHHHHHHTSSSCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHH
T ss_pred HHHHHHHHhCCCCcccCHHHHHHHHHHHHH----cCCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHH
Confidence 0 0 0011111111110000 0117888999999999 999999999999999986 578889
Q ss_pred cHHHHHHh
Q psy3020 141 NRSAAFAK 148 (150)
Q Consensus 141 n~a~~~~~ 148 (150)
++|.+|..
T Consensus 151 ~lg~~~~~ 158 (273)
T 1ouv_A 151 ILGSLYDA 158 (273)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 99998875
No 127
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.17 E-value=2.2e-10 Score=84.26 Aligned_cols=116 Identities=10% Similarity=0.115 Sum_probs=92.3
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcH----HHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNE----QMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPF 76 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~----~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~ 76 (150)
.+|.++...|++++|+..|+++++++|++. .++..+|.+ ..+| ++.+++ ..+.+++.+.
T Consensus 53 ~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g--------~~~~A~--~~~~~al~~~------ 116 (411)
T 4a1s_A 53 LEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLG--------DYNKAM--QYHKHDLTLA------ 116 (411)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHHHH------
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCC--------CHHHHH--HHHHHHHHHH------
Confidence 478999999999999999999999999987 478889999 8888 556666 4444443321
Q ss_pred CCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhh------cCCCcchhhcHHHHHHhc
Q psy3020 77 LSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKL------DGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 77 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~n~a~~~~~~ 149 (150)
......+ .....+..+|.++...|++++|+++|.+++++ .|....++.++|.+|..+
T Consensus 117 ----------~~~~~~~------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~ 179 (411)
T 4a1s_A 117 ----------KSMNDRL------GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAK 179 (411)
T ss_dssp ----------HHTTCHH------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred ----------HHccCch------HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHc
Confidence 1111112 22788999999999999999999999999999 677788999999998764
No 128
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.17 E-value=7.2e-11 Score=71.20 Aligned_cols=86 Identities=16% Similarity=0.205 Sum_probs=74.7
Q ss_pred cCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHH
Q psy3020 26 LDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISL 104 (150)
Q Consensus 26 ~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 104 (150)
++|+++.++..+|.+ ...| ++.+|+ ..+.+++..+|+. ...
T Consensus 1 l~p~~~~~~~~~~~~~~~~~--------~~~~A~--~~~~~a~~~~~~~----------------------------~~~ 42 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQYDAG--------NYTESI--DLFEKAIQLDPEE----------------------------SKY 42 (112)
T ss_dssp CCCSSTTGGGGHHHHHHSSC--------CHHHHH--HHHHHHHHHCCCC----------------------------HHH
T ss_pred CCCCcHHHHHHHHHHHHHhh--------hHHHHH--HHHHHHHHhCcCC----------------------------HHH
Confidence 479999999999999 8888 667777 6676677666643 678
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhhcCC--CcchhhcHHHHHHhc
Q psy3020 105 LKDKGNAALQANNFKEAIEAYSEAIKLDGT--NHILFSNRSAAFAKA 149 (150)
Q Consensus 105 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~n~a~~~~~~ 149 (150)
+..+|.+++..|++++|+++|+++++++|+ ++.+++++|.++..+
T Consensus 43 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~ 89 (112)
T 2kck_A 43 WLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRYI 89 (112)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999 999999999999765
No 129
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.16 E-value=1.9e-11 Score=93.10 Aligned_cols=103 Identities=9% Similarity=0.040 Sum_probs=84.1
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.+|..+|++++|++.|++|++++|+++.++..+|.+ ..+| ++.+|+ ..+.+++.++|++
T Consensus 45 ~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g--------~~~eA~--~~~~~al~~~p~~------- 107 (477)
T 1wao_1 45 NRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALG--------KFRAAL--RDYETVVKVKPHD------- 107 (477)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHHHSTTC-------
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCCCC-------
Confidence 589999999999999999999999999999999999999 9999 778888 8888888888865
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHH--HHHhcCHHHHHHHHH-----------HHHhhcCCCcchhhcH
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNA--ALQANNFKEAIEAYS-----------EAIKLDGTNHILFSNR 142 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~A~~~~~-----------~al~~~p~~~~~~~n~ 142 (150)
..++..++.+ +..+|++++|++.++ ++++++|+....++..
T Consensus 108 ---------------------~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~ 161 (477)
T 1wao_1 108 ---------------------KDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPKLED 161 (477)
T ss_dssp ---------------------TTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCCSCCCGG
T ss_pred ---------------------HHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhcccccccccccccc
Confidence 3345566666 788899999999999 9999999877666554
No 130
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.16 E-value=3.2e-10 Score=73.13 Aligned_cols=97 Identities=10% Similarity=0.076 Sum_probs=79.7
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
.+|.++...|++++|+..|+++++++|+++.++..+|.+ ..+| ++.+|+ ..+.+.+..+|++..
T Consensus 52 ~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~--------~~~~A~--~~~~~a~~~~p~~~~----- 116 (166)
T 1a17_A 52 NRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALG--------KFRAAL--RDYETVVKVKPHDKD----- 116 (166)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHSTTCHH-----
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhc--------cHHHHH--HHHHHHHHhCCCCHH-----
Confidence 579999999999999999999999999999999999999 9999 667777 777777777775421
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCC
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGT 134 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 134 (150)
...+..++..+...|++++|++.+.++..+.+.
T Consensus 117 ---------------------~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~ 149 (166)
T 1a17_A 117 ---------------------AKMKYQECNKIVKQKAFERAIAGDEHKRSVVDS 149 (166)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------HHHHHHHHHHHHHHHHHHHHHHcccchHHHhcc
Confidence 223345566678899999999999998776543
No 131
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.16 E-value=2.7e-10 Score=80.34 Aligned_cols=116 Identities=12% Similarity=0.195 Sum_probs=92.2
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhcc--------CCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKL--------DPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPR 72 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~--------~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~ 72 (150)
.+|.+|...|++++|+..|++++++ +|....++..++.+ ...| ++.+|+ ..+.+++...
T Consensus 74 ~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g--------~~~~A~--~~~~~a~~~~-- 141 (311)
T 3nf1_A 74 ILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRG--------KYKEAE--PLCKRALEIR-- 141 (311)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTT--------CHHHHH--HHHHHHHHHH--
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcC--------cHHHHH--HHHHHHHHHH--
Confidence 5799999999999999999999988 56778889999999 8888 556666 4444333221
Q ss_pred CCCCCCChHHHHHHHHH--hcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhh--------cCCCcchhhcH
Q psy3020 73 TKPFLSDPSYVQMIKEI--QKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKL--------DGTNHILFSNR 142 (150)
Q Consensus 73 ~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~n~ 142 (150)
... ...+. ....+..+|.++...|++++|+++|++++++ +|..+.+++++
T Consensus 142 --------------~~~~~~~~~~------~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l 201 (311)
T 3nf1_A 142 --------------EKVLGKDHPD------VAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNL 201 (311)
T ss_dssp --------------HHHHCTTCHH------HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHH
T ss_pred --------------HHhcCCCChH------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 111 11122 2788999999999999999999999999999 88888899999
Q ss_pred HHHHHhc
Q psy3020 143 SAAFAKA 149 (150)
Q Consensus 143 a~~~~~~ 149 (150)
|.+|..+
T Consensus 202 a~~~~~~ 208 (311)
T 3nf1_A 202 ASCYLKQ 208 (311)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 9999865
No 132
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.16 E-value=5.2e-11 Score=85.47 Aligned_cols=136 Identities=7% Similarity=0.051 Sum_probs=74.8
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCC------cHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCC
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPN------NEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKP 75 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~------~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~ 75 (150)
.|.+|...|++++|+++|.+++++.+. -..++..++.+ ..+|+ +.+|+ ..+.+++.+.+....
T Consensus 42 a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~--------~~~A~--~~~~~Al~l~~~~g~ 111 (307)
T 2ifu_A 42 AAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQR--------MPEAV--QYIEKASVMYVENGT 111 (307)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC--------GGGGH--HHHHHHHHHHHTTTC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC--------HHHHH--HHHHHHHHHHHHcCC
Confidence 466677777777777777777776553 27777777777 66663 33333 333333333221110
Q ss_pred C-------------CCChHHHHHHHHHhcCcchhh----hHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCc--
Q psy3020 76 F-------------LSDPSYVQMIKEIQKDPSLMT----LEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNH-- 136 (150)
Q Consensus 76 ~-------------~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~-- 136 (150)
. +....+...+..+.+...... .......+.++|.++...|+|++|+++|++++++.|++.
T Consensus 112 ~~~~a~~~~~lg~~~~~g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 191 (307)
T 2ifu_A 112 PDTAAMALDRAGKLMEPLDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENY 191 (307)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCh
Confidence 0 000011111111110000000 001156788888888889999999999999998877654
Q ss_pred ----chhhcHHHHHHh
Q psy3020 137 ----ILFSNRSAAFAK 148 (150)
Q Consensus 137 ----~~~~n~a~~~~~ 148 (150)
..+.++|.++..
T Consensus 192 ~~~~~~~~~~g~~~~~ 207 (307)
T 2ifu_A 192 PTCYKKCIAQVLVQLH 207 (307)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH
Confidence 366777777764
No 133
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.15 E-value=8.6e-11 Score=86.28 Aligned_cols=116 Identities=16% Similarity=0.101 Sum_probs=78.8
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCC-------cHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPN-------NEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRT 73 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~-------~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~ 73 (150)
.+|.+|...|++++|+..|++|+++.|. .+.++..+|.+ ..+| ++.+|+ ..+.+++.+.+..
T Consensus 146 ~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~--------~~~~A~--~~~~~al~~~~~~ 215 (378)
T 3q15_A 146 KVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFK--------HYDKAL--PHLEAALELAMDI 215 (378)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhC--------CHHHHH--HHHHHHHHHHHHc
Confidence 5899999999999999999999997553 24467788888 8888 566666 5555555433211
Q ss_pred CCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHh-----hcCCCcchhhcHHHHHHh
Q psy3020 74 KPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIK-----LDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 74 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~-----~~p~~~~~~~n~a~~~~~ 148 (150)
.. .+ ....++.++|.++...|++++|+++|+++++ .+|..+.+++++|.+|.+
T Consensus 216 ~~----------------~~------~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~ 273 (378)
T 3q15_A 216 QN----------------DR------FIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCK 273 (378)
T ss_dssp TC----------------HH------HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH
T ss_pred CC----------------HH------HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHH
Confidence 10 00 1145666677777777777777777777776 666666666677766665
Q ss_pred c
Q psy3020 149 A 149 (150)
Q Consensus 149 ~ 149 (150)
+
T Consensus 274 ~ 274 (378)
T 3q15_A 274 A 274 (378)
T ss_dssp T
T ss_pred C
Confidence 4
No 134
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.15 E-value=4.3e-10 Score=82.11 Aligned_cols=116 Identities=14% Similarity=0.164 Sum_probs=90.9
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcH----HHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNE----QMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPF 76 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~----~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~ 76 (150)
..|.++...|++++|+..|+++++++|+++ .++..+|.+ ...| ++.+++ ..+.+++.+.+.
T Consensus 14 ~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g--------~~~~A~--~~~~~al~~~~~---- 79 (406)
T 3sf4_A 14 LEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLH--------DYAKAL--EYHHHDLTLART---- 79 (406)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHHH----
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhc--------CHHHHH--HHHHHHHHHHHh----
Confidence 479999999999999999999999999985 577888988 8888 566666 444444332211
Q ss_pred CCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCc------chhhcHHHHHHhc
Q psy3020 77 LSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNH------ILFSNRSAAFAKA 149 (150)
Q Consensus 77 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~------~~~~n~a~~~~~~ 149 (150)
....+ ..+.++..+|.++...|++++|+.+|.+++++.|... .++.++|.+|..+
T Consensus 80 ------------~~~~~------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~ 140 (406)
T 3sf4_A 80 ------------IGDQL------GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAK 140 (406)
T ss_dssp ------------TTCHH------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred ------------ccccH------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHc
Confidence 11111 2278899999999999999999999999999988764 4888999988754
No 135
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.14 E-value=6.5e-10 Score=78.68 Aligned_cols=116 Identities=14% Similarity=0.160 Sum_probs=89.9
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcH----HHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNE----QMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPF 76 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~----~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~ 76 (150)
..|.++...|++++|+..|+++++++|+++ .++..++.+ ...| ++.+++ ..+.+++...+
T Consensus 10 ~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g--------~~~~A~--~~~~~al~~~~----- 74 (338)
T 3ro2_A 10 LEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLH--------DYAKAL--EYHHHDLTLAR----- 74 (338)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHH-----
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHHhh-----
Confidence 468999999999999999999999999985 577788888 8888 556665 44443332211
Q ss_pred CCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcc------hhhcHHHHHHhc
Q psy3020 77 LSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHI------LFSNRSAAFAKA 149 (150)
Q Consensus 77 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~------~~~n~a~~~~~~ 149 (150)
.....+ ..+..+..+|.++...|++++|++.|.+++++.|.... ++.++|.+|..+
T Consensus 75 -----------~~~~~~------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~ 136 (338)
T 3ro2_A 75 -----------TIGDQL------GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAK 136 (338)
T ss_dssp -----------HHTCHH------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred -----------cccccH------HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHc
Confidence 111111 22788999999999999999999999999999887654 888899888754
No 136
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.14 E-value=3e-11 Score=81.19 Aligned_cols=125 Identities=13% Similarity=0.003 Sum_probs=91.3
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChH
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPS 81 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~ 81 (150)
.+.+...+|++++|.+.|+......+..+..+..+|.+ ...| ++.+|+ ..+.+++...|+...+... .
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--------~~~~A~--~~~~~al~~~~~~~~~~~~-~ 78 (198)
T 2fbn_A 10 HSSGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKN--------EINEAI--VKYKEALDFFIHTEEWDDQ-I 78 (198)
T ss_dssp ------------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHTTTTCTTCCCH-H
T ss_pred hhhhhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHHHhcccccchh-h
Confidence 35566778899999999988888888888899999999 8888 778888 8888888888876643210 0
Q ss_pred HHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 82 YVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 82 ~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
...... ......+..+|.+++..|++++|+.+|+++++++|+++.+++++|.+|..+
T Consensus 79 ~~~~~~-----------~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 135 (198)
T 2fbn_A 79 LLDKKK-----------NIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYF 135 (198)
T ss_dssp HHHHHH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHH-----------HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHc
Confidence 000000 011578999999999999999999999999999999999999999999865
No 137
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.14 E-value=3.7e-10 Score=87.76 Aligned_cols=113 Identities=12% Similarity=0.144 Sum_probs=87.6
Q ss_pred HHhhCCH-HHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccC--CCCCchhhhhCChHHHHhhccCCCCCCCCCChHH
Q psy3020 7 LSYLGRY-KESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDM--NRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSY 82 (150)
Q Consensus 7 ~~~~~~~-~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~--~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~ 82 (150)
....|.+ ++|++.++++|+++|++..+|...+.+ ..++.... .....+.+++ ..+..++..+|+.
T Consensus 38 ~~~~~~~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL--~~~~~~l~~~pK~--------- 106 (567)
T 1dce_A 38 KRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAEL--GFLESCLRVNPKS--------- 106 (567)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH--HHHHHHHHHCTTC---------
T ss_pred HHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHH--HHHHHHHHhCCCC---------
Confidence 3344444 578999999999999999999999999 88773100 0000145555 5555555555543
Q ss_pred HHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhc--CHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 83 VQMIKEIQKDPSLMTLEAKISLLKDKGNAALQAN--NFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
..+|..+++++.+.+ +++++++++.+++++||.|..+|++|+.++..+
T Consensus 107 -------------------y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l 156 (567)
T 1dce_A 107 -------------------YGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQA 156 (567)
T ss_dssp -------------------HHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred -------------------HHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHc
Confidence 889999999999999 779999999999999999999999999987654
No 138
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.14 E-value=4.5e-10 Score=81.08 Aligned_cols=130 Identities=9% Similarity=0.000 Sum_probs=98.9
Q ss_pred HHHhhCCH-HHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCC-CChHH
Q psy3020 6 CLSYLGRY-KESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFL-SDPSY 82 (150)
Q Consensus 6 ~~~~~~~~-~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~-~~~~~ 82 (150)
+....|.+ ++|+..++++|.++|++..+|...+.+ ..++. . .+.+++ ..+...+..+|++..+- .+...
T Consensus 41 a~~~~~e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~-~-----~~~eeL--~~~~~~L~~nPk~y~aW~~R~~i 112 (306)
T 3dra_A 41 ALMKAEEYSERALHITELGINELASHYTIWIYRFNILKNLPN-R-----NLYDEL--DWCEEIALDNEKNYQIWNYRQLI 112 (306)
T ss_dssp HHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTT-S-----CHHHHH--HHHHHHHHHCTTCCHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHccc-c-----cHHHHH--HHHHHHHHHCcccHHHHHHHHHH
Confidence 33445555 689999999999999999999999999 77772 1 567777 77788889999887631 11111
Q ss_pred HH-----------------H-HHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHH--HHHHHHHHHHhhcCCCcchhhcH
Q psy3020 83 VQ-----------------M-IKEIQKDPSLMTLEAKISLLKDKGNAALQANNFK--EAIEAYSEAIKLDGTNHILFSNR 142 (150)
Q Consensus 83 ~~-----------------~-~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~A~~~~~~al~~~p~~~~~~~n~ 142 (150)
.. . -..+..+|.. ..+|..++.+....|.++ +++++++++++.||.|..+|++|
T Consensus 113 L~~~~~~l~~~~~~~~EL~~~~~~l~~~pkn------y~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R 186 (306)
T 3dra_A 113 IGQIMELNNNDFDPYREFDILEAMLSSDPKN------HHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHR 186 (306)
T ss_dssp HHHHHHHTTTCCCTHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHhccccCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 10 0 0112333433 899999999999999999 99999999999999999999999
Q ss_pred HHHHHhc
Q psy3020 143 SAAFAKA 149 (150)
Q Consensus 143 a~~~~~~ 149 (150)
+.++..+
T Consensus 187 ~~ll~~l 193 (306)
T 3dra_A 187 FFLLFSK 193 (306)
T ss_dssp HHHHHSS
T ss_pred HHHHHhc
Confidence 9987653
No 139
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.13 E-value=2.9e-10 Score=74.44 Aligned_cols=93 Identities=11% Similarity=0.068 Sum_probs=75.3
Q ss_pred HHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHH
Q psy3020 31 EQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKG 109 (150)
Q Consensus 31 ~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g 109 (150)
++.+..+|.. ...| .+.+|+ ..+.+++.++|+++..- .+...| ..+.+|.++|
T Consensus 11 a~~~~~~G~~l~~~g--------~~eeAi--~~Y~kAL~l~p~~~~~~----------a~~~~~------~~a~a~~n~g 64 (159)
T 2hr2_A 11 AYLALSDAQRQLVAG--------EYDEAA--ANCRRAMEISHTMPPEE----------AFDHAG------FDAFCHAGLA 64 (159)
T ss_dssp HHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHHHHTTSCTTS----------CCCHHH------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCC--------CHHHHH--HHHHHHHhhCCCCcchh----------hhhhcc------chHHHHHHHH
Confidence 4556778888 8888 778888 99999999999854410 000001 1266999999
Q ss_pred HHHHHhcCHHHHHHHHHHHHhh-------cCCCcchh----hcHHHHHHhc
Q psy3020 110 NAALQANNFKEAIEAYSEAIKL-------DGTNHILF----SNRSAAFAKA 149 (150)
Q Consensus 110 ~~~~~~~~~~~A~~~~~~al~~-------~p~~~~~~----~n~a~~~~~~ 149 (150)
.++...|+|++|+.+|++||++ +|+++.+| +|+|.++..+
T Consensus 65 ~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~l 115 (159)
T 2hr2_A 65 EALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGL 115 (159)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHCCCHHHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHC
Confidence 9999999999999999999999 99999999 9999999875
No 140
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.13 E-value=8e-10 Score=79.76 Aligned_cols=103 Identities=12% Similarity=0.010 Sum_probs=85.4
Q ss_pred CCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHH
Q psy3020 11 GRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEI 89 (150)
Q Consensus 11 ~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 89 (150)
+++++++..++++|+++|.|..+|...+-+ ..+|.. ...+.+ ..+.+.+..+|.+
T Consensus 124 ~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~------~~~~EL--~~~~~~i~~d~~N---------------- 179 (306)
T 3dra_A 124 FDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLH------NDAKEL--SFVDKVIDTDLKN---------------- 179 (306)
T ss_dssp CCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCT------TCHHHH--HHHHHHHHHCTTC----------------
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccc------ChHHHH--HHHHHHHHhCCCC----------------
Confidence 789999999999999999999999999998 877732 111455 4555555555543
Q ss_pred hcCcchhhhHHHhHHHHHHHHHHHHhcC------HHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 90 QKDPSLMTLEAKISLLKDKGNAALQANN------FKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
..+|..++.++...+. ++++++++.++|.++|+|..+|++++.++.+.
T Consensus 180 ------------~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~ 233 (306)
T 3dra_A 180 ------------NSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERF 233 (306)
T ss_dssp ------------HHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHT
T ss_pred ------------HHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhc
Confidence 7889999999988887 99999999999999999999999999888653
No 141
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.13 E-value=4e-10 Score=70.31 Aligned_cols=79 Identities=13% Similarity=-0.008 Sum_probs=67.5
Q ss_pred HHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHH
Q psy3020 33 MKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNA 111 (150)
Q Consensus 33 a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~ 111 (150)
.+..+|.+ ...| ++.+|+ ..+.+++..+|++ +.+|..+|.+
T Consensus 19 ~~~~~g~~~~~~g--------~~~~A~--~~~~~al~~~P~~----------------------------~~a~~~lg~~ 60 (121)
T 1hxi_A 19 NPMEEGLSMLKLA--------NLAEAA--LAFEAVCQKEPER----------------------------EEAWRSLGLT 60 (121)
T ss_dssp CHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHSTTC----------------------------HHHHHHHHHH
T ss_pred hHHHHHHHHHHcC--------CHHHHH--HHHHHHHHHCCCC----------------------------HHHHHHHHHH
Confidence 35667777 7777 667777 7777777777754 7889999999
Q ss_pred HHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 112 ALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 112 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+...|++++|+.+|+++++++|+++.+++++|.+|..+
T Consensus 61 ~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 61 QAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999764
No 142
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.11 E-value=1.6e-10 Score=73.71 Aligned_cols=116 Identities=11% Similarity=0.066 Sum_probs=82.9
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcH------HHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNE------QMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTK 74 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~------~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~ 74 (150)
.+|.++...|++++|+..|++++++.|... .++..+|.+ ..+| ++.+++ ..+.+++...+...
T Consensus 14 ~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g--------~~~~A~--~~~~~a~~~~~~~~ 83 (164)
T 3ro3_A 14 NLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLG--------EFETAS--EYYKKTLLLARQLK 83 (164)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHHHHHhC
Confidence 579999999999999999999999876433 367788888 8888 566666 55555544333211
Q ss_pred CCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCC------cchhhcHHHHHHh
Q psy3020 75 PFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTN------HILFSNRSAAFAK 148 (150)
Q Consensus 75 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~n~a~~~~~ 148 (150)
. .+ .....+..+|.++...|++++|++++.+++++.+.. +..+.++|.+|..
T Consensus 84 ~----------------~~------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~ 141 (164)
T 3ro3_A 84 D----------------RA------VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTA 141 (164)
T ss_dssp C----------------HH------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred C----------------cH------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHH
Confidence 1 00 115677888888888888888888888888775432 4567777777765
Q ss_pred c
Q psy3020 149 A 149 (150)
Q Consensus 149 ~ 149 (150)
+
T Consensus 142 ~ 142 (164)
T 3ro3_A 142 L 142 (164)
T ss_dssp H
T ss_pred c
Confidence 4
No 143
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.10 E-value=8.7e-11 Score=85.68 Aligned_cols=98 Identities=15% Similarity=0.158 Sum_probs=53.6
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
++|.||..+|+|++|+.+|+++|+++|+++.++..+|.+ ..+| ++.+|. ..+.+++.++|++.
T Consensus 235 nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g--------~~~~A~--~~l~~al~l~p~~~------ 298 (338)
T 2if4_A 235 NIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELG--------QMDSAR--DDFRKAQKYAPDDK------ 298 (338)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT--------CHHHHH--HHHHHTTC------------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHHCCCCH------
Confidence 589999999999999999999999999999999999999 9999 778888 88888898888653
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHH-HHhcCHHHHHHHHHHHHhhcCCCcc
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAA-LQANNFKEAIEAYSEAIKLDGTNHI 137 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~A~~~~~~al~~~p~~~~ 137 (150)
.++..++.+. ...+..+++...|.+++..+|+++.
T Consensus 299 ----------------------~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 299 ----------------------AIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp ----------------------------------------------------------
T ss_pred ----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 3444555553 4567788999999999999998764
No 144
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.09 E-value=7.1e-10 Score=78.16 Aligned_cols=116 Identities=16% Similarity=0.186 Sum_probs=92.1
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhcc--------CCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKL--------DPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPR 72 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~--------~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~ 72 (150)
.+|.++...|++++|+..|++++++ +|....++..++.+ ...| ++.+|+ ..+.+++...
T Consensus 32 ~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g--------~~~~A~--~~~~~al~~~-- 99 (311)
T 3nf1_A 32 NLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQN--------KYKDAA--NLLNDALAIR-- 99 (311)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHH--
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCC--------CHHHHH--HHHHHHHHHH--
Confidence 5799999999999999999999995 77888899999999 8888 556666 4444443321
Q ss_pred CCCCCCChHHHHHHHHH--hcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc--------CCCcchhhcH
Q psy3020 73 TKPFLSDPSYVQMIKEI--QKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLD--------GTNHILFSNR 142 (150)
Q Consensus 73 ~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~n~ 142 (150)
... ...+ .....+..+|.++...|++++|+++|.+++++. |....+++++
T Consensus 100 --------------~~~~~~~~~------~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l 159 (311)
T 3nf1_A 100 --------------EKTLGKDHP------AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNL 159 (311)
T ss_dssp --------------HHHHCTTCH------HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred --------------HHHhCCCCh------HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHH
Confidence 111 1112 227889999999999999999999999999985 6678889999
Q ss_pred HHHHHhc
Q psy3020 143 SAAFAKA 149 (150)
Q Consensus 143 a~~~~~~ 149 (150)
|.++..+
T Consensus 160 a~~~~~~ 166 (311)
T 3nf1_A 160 ALLCQNQ 166 (311)
T ss_dssp HHHHHTT
T ss_pred HHHHHHc
Confidence 9998765
No 145
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.09 E-value=2e-09 Score=75.35 Aligned_cols=125 Identities=14% Similarity=0.073 Sum_probs=90.5
Q ss_pred hhhHHHHh----hCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-Hh----hhhccCCCCCchhhhhCChHHHHhhccCCC
Q psy3020 2 TTYSCLSY----LGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RN----QEMNDMNRGDPFANLFSDPNIFVQLQLDPR 72 (150)
Q Consensus 2 ~lg~~~~~----~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~----~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~ 72 (150)
.+|.+|.. .+++++|+..|+++++.+ ++.++..++.+ .. .+ ++.+++ ..+.+++...+.
T Consensus 79 ~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~--------~~~~A~--~~~~~a~~~~~~ 146 (273)
T 1ouv_A 79 LLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTR--------DFKKAV--EYFTKACDLNDG 146 (273)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCC--------CHHHHH--HHHHHHHHTTCH
T ss_pred HHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCccc--------CHHHHH--HHHHHHHhcCcH
Confidence 57899999 999999999999999884 88999999998 65 55 666777 666666665431
Q ss_pred CCCC------CC----ChHHHHHHHH----HhcCcchhhhHHHhHHHHHHHHHHHH----hcCHHHHHHHHHHHHhhcCC
Q psy3020 73 TKPF------LS----DPSYVQMIKE----IQKDPSLMTLEAKISLLKDKGNAALQ----ANNFKEAIEAYSEAIKLDGT 134 (150)
Q Consensus 73 ~~~~------~~----~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~ 134 (150)
.... .. ...+...+.. +..++ +.++..+|.++.. .+++++|+++|+++++.+|
T Consensus 147 ~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~--------~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~- 217 (273)
T 1ouv_A 147 DGCTILGSLYDAGRGTPKDLKKALASYDKACDLKD--------SPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN- 217 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC--------HHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC--------HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC-
Confidence 1100 00 0011111111 11111 6788999999999 9999999999999999977
Q ss_pred CcchhhcHHHHHHh
Q psy3020 135 NHILFSNRSAAFAK 148 (150)
Q Consensus 135 ~~~~~~n~a~~~~~ 148 (150)
+.+++++|.+|..
T Consensus 218 -~~a~~~l~~~~~~ 230 (273)
T 1ouv_A 218 -GGGCFNLGAMQYN 230 (273)
T ss_dssp -HHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHc
Confidence 8889999999875
No 146
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.08 E-value=5.2e-10 Score=74.55 Aligned_cols=100 Identities=12% Similarity=0.145 Sum_probs=66.4
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhc------cCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLK------LDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTK 74 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~------~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~ 74 (150)
.+|.++...|++++|+..|+++++ ..|....++..+|.+ ..+| ++.++. ..+.+++.......
T Consensus 31 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g--------~~~~A~--~~~~~al~~~~~~~ 100 (203)
T 3gw4_A 31 MLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAG--------NWDAAR--RCFLEERELLASLP 100 (203)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHHHSC
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHHHHHcC
Confidence 579999999999999999999999 666777888999999 8888 556666 55555544311110
Q ss_pred CCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Q psy3020 75 PFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLD 132 (150)
Q Consensus 75 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 132 (150)
. .+. .....+..+|.++...|++++|++++.+++++.
T Consensus 101 ~----------------~~~-----~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 101 E----------------DPL-----AASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp C----------------CHH-----HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred c----------------cHH-----HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 0 000 014455566666666666666666666666543
No 147
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.08 E-value=5.8e-09 Score=74.10 Aligned_cols=115 Identities=12% Similarity=0.087 Sum_probs=88.0
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCCcHHH------HHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCC
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPNNEQM------KEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKP 75 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a------~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~ 75 (150)
.+..+...|+|++|++.|+++++..|..... +..++.+ ...| ++.+|+ ..+.+++...+....
T Consensus 81 ~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~A~--~~~~~al~~~~~~~~ 150 (293)
T 2qfc_A 81 QVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKV--------DYEYCI--LELKKLLNQQLTGID 150 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSS--------CHHHHH--HHHHHHHTTCCCSSC
T ss_pred HHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCC--------CHHHHH--HHHHHHHHHHhcCCc
Confidence 4677889999999999999999998876532 3455666 6666 667777 777777766554322
Q ss_pred CCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHH---hhcCCCc----chhhcHHHHHHh
Q psy3020 76 FLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAI---KLDGTNH----ILFSNRSAAFAK 148 (150)
Q Consensus 76 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al---~~~p~~~----~~~~n~a~~~~~ 148 (150)
.. ....++..+|.++...|++++|+++|++++ +..|++. .+++|+|.+|..
T Consensus 151 ~~----------------------~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~ 208 (293)
T 2qfc_A 151 VY----------------------QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL 208 (293)
T ss_dssp TT----------------------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred hH----------------------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHH
Confidence 11 116789999999999999999999999999 5566543 689999999987
Q ss_pred c
Q psy3020 149 A 149 (150)
Q Consensus 149 ~ 149 (150)
+
T Consensus 209 ~ 209 (293)
T 2qfc_A 209 D 209 (293)
T ss_dssp T
T ss_pred H
Confidence 5
No 148
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.08 E-value=2.7e-10 Score=81.71 Aligned_cols=47 Identities=15% Similarity=0.186 Sum_probs=42.0
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCC------cchhhcHHHHHHhc
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTN------HILFSNRSAAFAKA 149 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~n~a~~~~~~ 149 (150)
..++.++|.++.. |++++|+++|++++++.|.. ..++.++|.+|..+
T Consensus 116 a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~ 168 (307)
T 2ifu_A 116 AMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQ 168 (307)
T ss_dssp HHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHc
Confidence 6788999999988 99999999999999999865 57889999998865
No 149
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.07 E-value=2.3e-10 Score=83.60 Aligned_cols=138 Identities=15% Similarity=0.159 Sum_probs=95.1
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhcc------CCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKL------DPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTK 74 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~------~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~ 74 (150)
.+|.++...|++++|+..|++++++ .|..+.++..+|.+ ..+| ++.+|+ ..+.+++...|...
T Consensus 52 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g--------~~~~A~--~~~~~al~~~~~~~ 121 (406)
T 3sf4_A 52 QLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLG--------NFDEAI--VCCQRHLDISRELN 121 (406)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHHHHhcc
Confidence 5799999999999999999999988 56667888999999 8888 556666 55666655544332
Q ss_pred C------CCC--------ChH--------------------HHHHHHHHhcCcchhh----hHHHhHHHHHHHHHHHHhc
Q psy3020 75 P------FLS--------DPS--------------------YVQMIKEIQKDPSLMT----LEAKISLLKDKGNAALQAN 116 (150)
Q Consensus 75 ~------~~~--------~~~--------------------~~~~~~~l~~~~~~~~----~~~~~~~~~~~g~~~~~~~ 116 (150)
. .+. ... +...+..+.+...... .+.....+..+|.++...|
T Consensus 122 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 201 (406)
T 3sf4_A 122 DKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLG 201 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred cccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHcc
Confidence 1 000 001 1111111111000000 0122668889999999999
Q ss_pred CHHHHHHHHHHHHhhcCCCcc------hhhcHHHHHHhc
Q psy3020 117 NFKEAIEAYSEAIKLDGTNHI------LFSNRSAAFAKA 149 (150)
Q Consensus 117 ~~~~A~~~~~~al~~~p~~~~------~~~n~a~~~~~~ 149 (150)
++++|+++|.+++++.|+... ++.++|.+|..+
T Consensus 202 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 240 (406)
T 3sf4_A 202 NFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFL 240 (406)
T ss_dssp BHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHc
Confidence 999999999999999888766 889999998765
No 150
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.07 E-value=5.8e-10 Score=82.03 Aligned_cols=48 Identities=19% Similarity=0.091 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcc------hhhcHHHHHHhc
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHI------LFSNRSAAFAKA 149 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~------~~~n~a~~~~~~ 149 (150)
...+..+|.++...|++++|+++|.+++++.|.... .++++|.+|..+
T Consensus 223 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 276 (411)
T 4a1s_A 223 GRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFL 276 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHC
Confidence 567777777777777777777777777777776555 677777777654
No 151
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.07 E-value=1.4e-09 Score=79.66 Aligned_cols=106 Identities=6% Similarity=-0.028 Sum_probs=89.3
Q ss_pred HHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHH
Q psy3020 6 CLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQ 84 (150)
Q Consensus 6 ~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~ 84 (150)
.+...+..++|++.++++|.++|++..+|...+.+ ..++. .+.+++ ..+...+..+|++
T Consensus 63 ~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~-------~l~eEL--~~~~~~L~~nPKn----------- 122 (349)
T 3q7a_A 63 IAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNK-------SLEDEL--RLMNEFAVQNLKS----------- 122 (349)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------CHHHHH--HHHHHHHHTTCCC-----------
T ss_pred HHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhh-------hHHHHH--HHHHHHHHhCCCc-----------
Confidence 34555667899999999999999999999999999 77772 255666 5666666666653
Q ss_pred HHHHHhcCcchhhhHHHhHHHHHHHHHHHHh-c-CHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 85 MIKEIQKDPSLMTLEAKISLLKDKGNAALQA-N-NFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~-~-~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
..+|..++.++... + +++++++.+.++++++|.|..+|++|+.++..
T Consensus 123 -----------------y~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~ 171 (349)
T 3q7a_A 123 -----------------YQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSH 171 (349)
T ss_dssp -----------------HHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHH
T ss_pred -----------------HHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 78999999999887 7 99999999999999999999999999988754
No 152
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.05 E-value=1.9e-09 Score=73.37 Aligned_cols=131 Identities=8% Similarity=-0.014 Sum_probs=91.3
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCC---
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFL--- 77 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~--- 77 (150)
.+|.+|...+++++|++.|+++++. +++.++..++.+ .. +.. ..++.+++ .-+.++.. +.+....
T Consensus 23 ~lg~~~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~----~~~~~~A~--~~~~~A~~--~g~~~a~~~L 91 (212)
T 3rjv_A 23 YLADTWVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQ----QADYPQAR--QLAEKAVE--AGSKSGEIVL 91 (212)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STT----SCCHHHHH--HHHHHHHH--TTCHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCC----CCCHHHHH--HHHHHHHH--CCCHHHHHHH
Confidence 5899999999999999999999865 689999999999 65 411 11455665 44544432 2333210
Q ss_pred -----C----ChHHHHHH---HH-HhcCcchhhhHHHhHHHHHHHHHHHH----hcCHHHHHHHHHHHHhhcCCCcchhh
Q psy3020 78 -----S----DPSYVQMI---KE-IQKDPSLMTLEAKISLLKDKGNAALQ----ANNFKEAIEAYSEAIKLDGTNHILFS 140 (150)
Q Consensus 78 -----~----~~~~~~~~---~~-l~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~ 140 (150)
. ...+.+.+ .. +..++.. ..+.++..+|.++.. .+++++|+++|++++++ |.++.+++
T Consensus 92 g~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~----~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~ 166 (212)
T 3rjv_A 92 ARVLVNRQAGATDVAHAITLLQDAARDSESD----AAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEY 166 (212)
T ss_dssp HHHHTCGGGSSCCHHHHHHHHHHHTSSTTSH----HHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHH
T ss_pred HHHHHcCCCCccCHHHHHHHHHHHHHcCCCc----chHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHH
Confidence 0 00111121 11 2222210 127899999999998 89999999999999999 77888999
Q ss_pred cHHHHHHh
Q psy3020 141 NRSAAFAK 148 (150)
Q Consensus 141 n~a~~~~~ 148 (150)
++|.+|..
T Consensus 167 ~Lg~~y~~ 174 (212)
T 3rjv_A 167 WAGMMFQQ 174 (212)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 99999975
No 153
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.05 E-value=2.3e-09 Score=78.14 Aligned_cols=101 Identities=16% Similarity=0.054 Sum_probs=85.7
Q ss_pred HHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhc
Q psy3020 13 YKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQK 91 (150)
Q Consensus 13 ~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 91 (150)
+++++.+++.+|..+|.+..+|...+-+ ..++.. .+.+++ ..+.+.+..+|.+
T Consensus 90 l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~------~~~~EL--~~~~k~l~~dprN------------------ 143 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEP------NWAREL--ELCARFLEADERN------------------ 143 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSC------CHHHHH--HHHHHHHHHCTTC------------------
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcc------cHHHHH--HHHHHHHHhCCCC------------------
Confidence 7899999999999999999999999988 777721 245555 5666666666643
Q ss_pred CcchhhhHHHhHHHHHHHHHHHHhcC-HHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 92 DPSLMTLEAKISLLKDKGNAALQANN-FKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 92 ~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
..+|..++.+....|. ++++++++.++++.+|.|..+|++|+.++..+
T Consensus 144 ----------y~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 144 ----------FHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 192 (331)
T ss_dssp ----------HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHh
Confidence 7899999999999998 69999999999999999999999999987653
No 154
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.04 E-value=1.4e-09 Score=74.08 Aligned_cols=117 Identities=11% Similarity=0.007 Sum_probs=79.2
Q ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCC--------CCC---hH
Q psy3020 14 KESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPF--------LSD---PS 81 (150)
Q Consensus 14 ~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~--------~~~---~~ 81 (150)
.+|+..|+++.+. .++.++..++.+ ...+ ++.+|+ .-+.++.... +... ... ..
T Consensus 3 ~eA~~~~~~aa~~--g~~~a~~~lg~~~~~~~--------~~~~A~--~~~~~a~~~g--~~~a~~~lg~~y~~~g~~~~ 68 (212)
T 3rjv_A 3 TEPGSQYQQQAEA--GDRRAQYYLADTWVSSG--------DYQKAE--YWAQKAAAQG--DGDALALLAQLKIRNPQQAD 68 (212)
T ss_dssp -CTTHHHHHHHHT--TCHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHHTT--CHHHHHHHHHHTTSSTTSCC
T ss_pred chHHHHHHHHHHC--CCHHHHHHHHHHHhcCC--------CHHHHH--HHHHHHHHcC--CHHHHHHHHHHHHcCCCCCC
Confidence 4688999999875 899999999999 7777 556666 5555554321 1110 000 01
Q ss_pred HHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHH----hcCHHHHHHHHHHHHhhcC--CCcchhhcHHHHHHh
Q psy3020 82 YVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQ----ANNFKEAIEAYSEAIKLDG--TNHILFSNRSAAFAK 148 (150)
Q Consensus 82 ~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p--~~~~~~~n~a~~~~~ 148 (150)
+...+.-+.+... ...+.++..+|.++.. .+++++|+++|+++++..| +++.+++++|.+|..
T Consensus 69 ~~~A~~~~~~A~~----~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 69 YPQARQLAEKAVE----AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHc
Confidence 1111111111000 0127889999999987 8999999999999999999 469999999999975
No 155
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.04 E-value=9.5e-10 Score=80.71 Aligned_cols=117 Identities=13% Similarity=0.067 Sum_probs=90.4
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccC------CCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLD------PNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTK 74 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~------p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~ 74 (150)
..|..+...|++++|+..|++|+++- |..+.++..+|.+ ..+| ++..|+ ..+.+++.+.+...
T Consensus 106 ~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~--------~~~~A~--~~~~~al~~~~~~~ 175 (378)
T 3q15_A 106 FRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMK--------QTHVSM--YHILQALDIYQNHP 175 (378)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHHTST
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcC--------CcHHHH--HHHHHHHHHHHhCC
Confidence 36889999999999999999999873 3356688899999 8888 666777 66666655444322
Q ss_pred CCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCC------CcchhhcHHHHHHh
Q psy3020 75 PFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGT------NHILFSNRSAAFAK 148 (150)
Q Consensus 75 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~n~a~~~~~ 148 (150)
... + ..+.++..+|.++...|++++|+++|.+++++.+. ...+++|+|.+|..
T Consensus 176 ~~~---------------~------~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~ 234 (378)
T 3q15_A 176 LYS---------------I------RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDR 234 (378)
T ss_dssp TCH---------------H------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred Cch---------------h------hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 100 0 11778999999999999999999999999997553 24688999999986
Q ss_pred c
Q psy3020 149 A 149 (150)
Q Consensus 149 ~ 149 (150)
+
T Consensus 235 ~ 235 (378)
T 3q15_A 235 S 235 (378)
T ss_dssp H
T ss_pred C
Confidence 5
No 156
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.04 E-value=3.3e-09 Score=77.26 Aligned_cols=111 Identities=13% Similarity=0.130 Sum_probs=83.3
Q ss_pred HhhCCHH-HHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCC---CchhhhhCChHHHHhhccCCCCCCCCCChHH
Q psy3020 8 SYLGRYK-ESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRG---DPFANLFSDPNIFVQLQLDPRTKPFLSDPSY 82 (150)
Q Consensus 8 ~~~~~~~-~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~---~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~ 82 (150)
...|.++ +|++.+.++|.++|++..+|...+.+ ..++... .++ ..+.+.+ ..+...+..+|
T Consensus 40 ~~~~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~-~~~~~~~~l~~EL--~~~~~~L~~~P----------- 105 (331)
T 3dss_A 40 RQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEK-SPEESAALVKAEL--GFLESCLRVNP----------- 105 (331)
T ss_dssp HHTTCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHH--HHHHHHHHHCT-----------
T ss_pred HHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccc-cchhhhHHHHHHH--HHHHHHHHhCC-----------
Confidence 3456665 79999999999999999999999988 7666310 000 0123333 33333334444
Q ss_pred HHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhc--CHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 83 VQMIKEIQKDPSLMTLEAKISLLKDKGNAALQAN--NFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
.. ..+|..++.++...+ .+++++.++.++++++|.|..+|++|+.+....
T Consensus 106 -----------Kn------y~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l 157 (331)
T 3dss_A 106 -----------KS------YGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQA 157 (331)
T ss_dssp -----------TC------HHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred -----------CC------HHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 33 889999999999988 499999999999999999999999999887543
No 157
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.04 E-value=2e-09 Score=66.72 Aligned_cols=86 Identities=14% Similarity=0.242 Sum_probs=74.9
Q ss_pred cCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHH
Q psy3020 26 LDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISL 104 (150)
Q Consensus 26 ~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 104 (150)
..|.++.++..+|.+ ...| ++.+|+ ..+.+++..+|++ ...
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~--------~~~~A~--~~~~~al~~~~~~----------------------------~~~ 52 (133)
T 2lni_A 11 MNPDLALMVKNKGNECFQKG--------DYPQAM--KHYTEAIKRNPKD----------------------------AKL 52 (133)
T ss_dssp SSSCHHHHHHHHHHHHHHTT--------CSHHHH--HHHHHHHTTCTTC----------------------------HHH
T ss_pred cCcccHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHcCCCc----------------------------HHH
Confidence 467888999999999 8888 667777 7777777776643 678
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 105 LKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 105 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+..+|.++...|++++|+++|+++++++|+++.+++++|.++..+
T Consensus 53 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~ 97 (133)
T 2lni_A 53 YSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAM 97 (133)
T ss_dssp HHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999865
No 158
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.03 E-value=2.8e-09 Score=62.12 Aligned_cols=62 Identities=26% Similarity=0.393 Sum_probs=54.9
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRT 73 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~ 73 (150)
.+|.++...|++++|+..|+++++++|+++.++..+|.+ ..+| ++.+|+ ..+.+++..+|++
T Consensus 14 ~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~--------~~~~A~--~~~~~a~~~~p~~ 76 (91)
T 1na3_A 14 NLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQG--------DYDEAI--EYYQKALELDPNN 76 (91)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC
T ss_pred HHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh--------hHHHHH--HHHHHHHhcCCCC
Confidence 478999999999999999999999999999999999999 8888 667777 7777777777754
No 159
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.02 E-value=9.8e-10 Score=66.16 Aligned_cols=76 Identities=13% Similarity=0.183 Sum_probs=63.7
Q ss_pred cCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHH
Q psy3020 26 LDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISL 104 (150)
Q Consensus 26 ~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 104 (150)
.+|+++.++..+|.+ ..+| ++.+|+ ..+.+++..+|+. +.+
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g--------~~~~A~--~~~~~al~~~p~~----------------------------~~a 43 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHD--------NASRAL--ALFEELVETDPDY----------------------------VGT 43 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHSTTC----------------------------THH
T ss_pred CCccCHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCCCc----------------------------HHH
Confidence 589999999999999 9999 777888 7888888888754 678
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchh
Q psy3020 105 LKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILF 139 (150)
Q Consensus 105 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 139 (150)
|..+|.++...|++++|++.|++++++.|++....
T Consensus 44 ~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~ 78 (100)
T 3ma5_A 44 YYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQK 78 (100)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchh
Confidence 99999999999999999999999999998765443
No 160
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.01 E-value=5.1e-09 Score=74.39 Aligned_cols=114 Identities=12% Similarity=0.091 Sum_probs=86.1
Q ss_pred hHHHHhhCCHHHHHHHHHHhhccCCCcHHH------HHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCC
Q psy3020 4 YSCLSYLGRYKESISTYEEGLKLDPNNEQM------KEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPF 76 (150)
Q Consensus 4 g~~~~~~~~~~~A~~~~~~aL~~~p~~~~a------~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~ 76 (150)
+..+...|+|++|+..|+++++..|.++.. +..++.+ ...+ ++.+|+ ..+.+++...+.....
T Consensus 82 i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~--------~~~~Ai--~~~~~al~~~~~~~~~ 151 (293)
T 3u3w_A 82 VIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKV--------DYEYCI--LELKKLLNQQLTGIDV 151 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSS--------CHHHHH--HHHHHHHHTCCCCSCT
T ss_pred HHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHccc--------CHHHHH--HHHHHHHHHhcccccH
Confidence 566788999999999999999988877663 2345555 5555 667777 7777777755543331
Q ss_pred CCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHh-------hcCCCcchhhcHHHHHHhc
Q psy3020 77 LSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIK-------LDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 77 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~-------~~p~~~~~~~n~a~~~~~~ 149 (150)
. ....++..+|.++...|++++|+++|.++++ ..|..+.+++|+|.+|.++
T Consensus 152 ~----------------------~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~ 209 (293)
T 3u3w_A 152 Y----------------------QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLD 209 (293)
T ss_dssp T----------------------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHT
T ss_pred H----------------------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHH
Confidence 1 1156789999999999999999999999995 3333456899999999875
No 161
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.00 E-value=7.5e-10 Score=78.36 Aligned_cols=138 Identities=15% Similarity=0.163 Sum_probs=92.7
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhcc------CCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKL------DPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTK 74 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~------~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~ 74 (150)
.+|.++...|++++|++.|++++++ .|..+.++..++.+ ...| .+.+++ ..+.+++...+...
T Consensus 48 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g--------~~~~A~--~~~~~al~~~~~~~ 117 (338)
T 3ro2_A 48 QLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLG--------NFDEAI--VCCQRHLDISRELN 117 (338)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHcc--------CHHHHH--HHHHHHHHHHHHhc
Confidence 5789999999999999999999988 66677888999999 8888 556666 55555555444332
Q ss_pred CC------CCC--------hH--------------------HHHHHHHHhcCcchhh----hHHHhHHHHHHHHHHHHhc
Q psy3020 75 PF------LSD--------PS--------------------YVQMIKEIQKDPSLMT----LEAKISLLKDKGNAALQAN 116 (150)
Q Consensus 75 ~~------~~~--------~~--------------------~~~~~~~l~~~~~~~~----~~~~~~~~~~~g~~~~~~~ 116 (150)
.. +.. .. +...+..+.+...... .+.....+..+|.++...|
T Consensus 118 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 197 (338)
T 3ro2_A 118 DKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLG 197 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHT
T ss_pred CchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhC
Confidence 10 000 00 1111111111000000 0122567888999999999
Q ss_pred CHHHHHHHHHHHHhhcCCCcc------hhhcHHHHHHhc
Q psy3020 117 NFKEAIEAYSEAIKLDGTNHI------LFSNRSAAFAKA 149 (150)
Q Consensus 117 ~~~~A~~~~~~al~~~p~~~~------~~~n~a~~~~~~ 149 (150)
++++|+++|.+++++.|.... .+.++|.++..+
T Consensus 198 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~ 236 (338)
T 3ro2_A 198 NFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFL 236 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHc
Confidence 999999999999998877655 888888888764
No 162
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.99 E-value=2.4e-09 Score=67.69 Aligned_cols=92 Identities=16% Similarity=0.182 Sum_probs=78.9
Q ss_pred hhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHH
Q psy3020 23 GLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAK 101 (150)
Q Consensus 23 aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 101 (150)
+...+|++...+..++.+ ...| ++.+++ ..+.+.+..+|+.. ..
T Consensus 20 ~~~~~~~~~~~~~~~a~~~~~~~--------~~~~A~--~~~~~a~~~~~~~~-------------------------~~ 64 (148)
T 2dba_A 20 PATPGASSVEQLRKEGNELFKCG--------DYGGAL--AAYTQALGLDATPQ-------------------------DQ 64 (148)
T ss_dssp CCCTTCCCHHHHHHHHHHHHTTT--------CHHHHH--HHHHHHHTSCCCHH-------------------------HH
T ss_pred CCccchHHHHHHHHHHHHHHHhC--------CHHHHH--HHHHHHHHHcccch-------------------------HH
Confidence 455778999999999999 8888 777888 78888888777521 11
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
...|..+|.+++..|++++|++.|+++++++|+++.+++++|.+|..+
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 112 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKL 112 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHHc
Confidence 678999999999999999999999999999999999999999999865
No 163
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.99 E-value=7.2e-09 Score=79.30 Aligned_cols=119 Identities=8% Similarity=-0.047 Sum_probs=72.1
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCCcH-HHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCC---
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPNNE-QMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFL--- 77 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~~~-~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~--- 77 (150)
+|..+...|++++|...|+++++++|+++ .+|..++.+ ...| .+.+|. ..+.+++...|......
T Consensus 327 ~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~--------~~~~A~--~~~~~Al~~~~~~~~~~~~~ 396 (530)
T 2ooe_A 327 YADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAE--------GIKSGR--MIFKKAREDARTRHHVYVTA 396 (530)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHH--------HHHHHH--HHHHHHHTCTTCCTHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhc--------CHHHHH--HHHHHHHhccCCchHHHHHH
Confidence 56667777888888888888888888775 577777777 6666 445555 55666666555432110
Q ss_pred --------CCh-HHHHHH-HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcc
Q psy3020 78 --------SDP-SYVQMI-KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHI 137 (150)
Q Consensus 78 --------~~~-~~~~~~-~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~ 137 (150)
.+. ...... ..+...|.. +..|..++..+...|++++|...|++++...|.++.
T Consensus 397 a~~~~~~~~~~~~A~~~~e~al~~~p~~------~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~~~ 460 (530)
T 2ooe_A 397 ALMEYYCSKDKSVAFKIFELGLKKYGDI------PEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE 460 (530)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHTTC------HHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSCGG
T ss_pred HHHHHHHcCChhHHHHHHHHHHHHCCCC------HHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCCHH
Confidence 000 000000 012222322 667777777777777777777777777777666554
No 164
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.99 E-value=2.4e-09 Score=65.96 Aligned_cols=88 Identities=14% Similarity=0.151 Sum_probs=73.5
Q ss_pred hccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHh
Q psy3020 24 LKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKI 102 (150)
Q Consensus 24 L~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 102 (150)
.+.+|+++.++..+|.+ ...| ++..|+ ..+.+.+..+|+. +
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~A~--~~~~~~~~~~~~~----------------------------~ 46 (131)
T 2vyi_A 5 SEEDSAEAERLKTEGNEQMKVE--------NFEAAV--HFYGKAIELNPAN----------------------------A 46 (131)
T ss_dssp --CHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC----------------------------H
T ss_pred hhcchhhhHHHHHHHHHHHHcc--------CHHHHH--HHHHHHHHcCCCC----------------------------H
Confidence 34567788899999999 8888 667777 6666666666642 6
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 103 SLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 103 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
..+..+|.++...|++++|+++|.++++++|+++..++++|.++..+
T Consensus 47 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (131)
T 2vyi_A 47 VYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSL 93 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHh
Confidence 78899999999999999999999999999999999999999999865
No 165
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.98 E-value=8e-09 Score=75.69 Aligned_cols=137 Identities=9% Similarity=0.003 Sum_probs=80.5
Q ss_pred hHHHHhhC-CHHHHHHHHHHhhccCCCcHHHHHHHHHH-Hhh-h-hccCCCCCchhhhh-CChH----------HHHhhc
Q psy3020 4 YSCLSYLG-RYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQ-E-MNDMNRGDPFANLF-SDPN----------IFVQLQ 68 (150)
Q Consensus 4 g~~~~~~~-~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~-g-~~~~~~~~~~~~a~-~~~~----------~~~~l~ 68 (150)
|.++..++ .+++++..++++|..+|.+..+|..++.+ ..+ + ..+ +.-..+..++ .++. +...+.
T Consensus 95 ~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~-~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~ 173 (349)
T 3q7a_A 95 FSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPV-SEIEYIHGSLLPDPKNYHTWAYLHWLYSHFS 173 (349)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCH-HHHHHHHHHTSSCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChH-HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc
Confidence 45566666 47777777777777777777777777766 544 3 111 0000111111 0000 000111
Q ss_pred c-CCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcC-------HHHHHHHHHHHHhhcCCCcchhh
Q psy3020 69 L-DPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANN-------FKEAIEAYSEAIKLDGTNHILFS 140 (150)
Q Consensus 69 ~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~A~~~~~~al~~~p~~~~~~~ 140 (150)
. .+....... ..+.-.-..++.+|.. ..+|..++.++...+. ++++++++.+++.++|+|..+|+
T Consensus 174 ~~~~~~~~~~~-eELe~~~k~I~~dp~N------~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~SaW~ 246 (349)
T 3q7a_A 174 TLGRISEAQWG-SELDWCNEMLRVDGRN------NSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWN 246 (349)
T ss_dssp HTTCCCHHHHH-HHHHHHHHHHHHCTTC------HHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cccccchhhHH-HHHHHHHHHHHhCCCC------HHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 1 100000000 0111222335566666 8999999999988886 79999999999999999999999
Q ss_pred cHHHHHHh
Q psy3020 141 NRSAAFAK 148 (150)
Q Consensus 141 n~a~~~~~ 148 (150)
++..++..
T Consensus 247 Ylr~Ll~~ 254 (349)
T 3q7a_A 247 YLRGFLKH 254 (349)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 97766643
No 166
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.97 E-value=2.4e-09 Score=69.56 Aligned_cols=93 Identities=20% Similarity=0.184 Sum_probs=70.3
Q ss_pred cHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhcc--------CCCCCCCCCChHHHHHHHHHhcCcchhhhHH
Q psy3020 30 NEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQL--------DPRTKPFLSDPSYVQMIKEIQKDPSLMTLEA 100 (150)
Q Consensus 30 ~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 100 (150)
.+..+..+|.. ...| ++.+|+ ..+.+++.. +|.... .. ..+| .
T Consensus 10 ~a~~~~~~G~~~~~~~--------~~~~A~--~~y~~al~~~~~~~~~~~~~~~~------~~------~~~~------~ 61 (162)
T 3rkv_A 10 SVEALRQKGNELFVQK--------DYKEAI--DAYRDALTRLDTLILREKPGEPE------WV------ELDR------K 61 (162)
T ss_dssp HHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHHHHHHTSCTTSHH------HH------HHHH------T
T ss_pred HHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHHHHHhcccCCCCHHH------HH------HHHH------H
Confidence 35667788888 8888 667777 667666655 222111 00 0011 2
Q ss_pred HhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhcC
Q psy3020 101 KISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKAI 150 (150)
Q Consensus 101 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~~ 150 (150)
....|.++|.++++.|+|++|+.+|+++++++|+++.+|+++|.+|..+.
T Consensus 62 ~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g 111 (162)
T 3rkv_A 62 NIPLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAW 111 (162)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHh
Confidence 27899999999999999999999999999999999999999999998763
No 167
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.96 E-value=1.9e-09 Score=76.75 Aligned_cols=44 Identities=14% Similarity=0.099 Sum_probs=38.5
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-Hhhhhc
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMN 46 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~ 46 (150)
.++.++...|+|++|.+.|+.++..+|++. ++..++.+ ...+++
T Consensus 107 ayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~ 151 (282)
T 4f3v_A 107 GFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERW 151 (282)
T ss_dssp HHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCH
Confidence 367889999999999999999999999988 88888888 888854
No 168
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.94 E-value=1.2e-08 Score=61.73 Aligned_cols=82 Identities=13% Similarity=0.145 Sum_probs=69.2
Q ss_pred cHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHH
Q psy3020 30 NEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDK 108 (150)
Q Consensus 30 ~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 108 (150)
.+.++..+|.+ ...| ++.+++ ..+.+.+..+|++ +..+..+
T Consensus 3 ~~~~~~~~~~~~~~~~--------~~~~A~--~~~~~~~~~~~~~----------------------------~~~~~~~ 44 (118)
T 1elw_A 3 QVNELKEKGNKALSVG--------NIDDAL--QCYSEAIKLDPHN----------------------------HVLYSNR 44 (118)
T ss_dssp HHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC----------------------------HHHHHHH
T ss_pred hHHHHHHHHHHHHHcc--------cHHHHH--HHHHHHHHHCCCc----------------------------HHHHHHH
Confidence 46677888888 7778 666777 6666666666643 6788999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 109 GNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 109 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
|.++...|++++|+..++++++++|+++.+++++|.++..+
T Consensus 45 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 85 (118)
T 1elw_A 45 SAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFL 85 (118)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999865
No 169
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.94 E-value=3.9e-09 Score=69.54 Aligned_cols=115 Identities=8% Similarity=0.004 Sum_probs=80.8
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCC--
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLS-- 78 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~-- 78 (150)
.+|.++...|++++|+..|+++++++| ++..+..++.+ ...+ . ....++ ..+.+++..+|++...+.
T Consensus 45 ~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~-~------~~~~a~--~~~~~al~~~P~~~~~~~~l 114 (176)
T 2r5s_A 45 AKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQ-A------AESPEL--KRLEQELAANPDNFELACEL 114 (176)
T ss_dssp HHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHH-H------TSCHHH--HHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhh-c------ccchHH--HHHHHHHHhCCCCHHHHHHH
Confidence 579999999999999999999999999 88777666655 3221 1 112245 677888889998765311
Q ss_pred ------ChHHHHHH----HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q psy3020 79 ------DPSYVQMI----KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIK 130 (150)
Q Consensus 79 ------~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 130 (150)
.+.+...+ ..+..+|.. ....++..+|.++...|++++|+..|.++|.
T Consensus 115 a~~~~~~g~~~~A~~~~~~~l~~~p~~----~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 115 AVQYNQVGRDEEALELLWNILKVNLGA----QDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCTTT----TTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHHhCccc----ChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 11111111 224445432 1256899999999999999999999999985
No 170
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.93 E-value=1.3e-08 Score=62.00 Aligned_cols=86 Identities=27% Similarity=0.390 Sum_probs=68.9
Q ss_pred cCCCc-HHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhH
Q psy3020 26 LDPNN-EQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKIS 103 (150)
Q Consensus 26 ~~p~~-~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 103 (150)
++|.+ ..++..++.+ ...| ++.+++ ..+.+.+...|+. ..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~--------~~~~A~--~~~~~~~~~~~~~----------------------------~~ 44 (125)
T 1na0_A 3 MDPGNSAEAWYNLGNAYYKQG--------DYDEAI--EYYQKALELDPNN----------------------------AE 44 (125)
T ss_dssp ----CHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC----------------------------HH
T ss_pred CCccccHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHHCcCc----------------------------HH
Confidence 56765 7888999998 8888 666676 6666666555532 66
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 104 LLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 104 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
.+..+|.++...|++++|+..|.++++++|+++..++++|.++..+
T Consensus 45 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~ 90 (125)
T 1na0_A 45 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQ 90 (125)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh
Confidence 7899999999999999999999999999999999999999998764
No 171
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.91 E-value=2.7e-09 Score=64.18 Aligned_cols=62 Identities=6% Similarity=0.037 Sum_probs=54.3
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRT 73 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~ 73 (150)
.+|.+|...|++++|+..|+++++++|+++.++..+|.+ ..+| ++.+|+ ..+.+++.+.|+.
T Consensus 12 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g--------~~~~A~--~~~~~al~l~~~~ 74 (100)
T 3ma5_A 12 ALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLD--------RTDDAI--DTYAQGIEVAREE 74 (100)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHhhhhcC
Confidence 589999999999999999999999999999999999999 9999 667777 6777777666543
No 172
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.89 E-value=6.1e-09 Score=74.06 Aligned_cols=116 Identities=9% Similarity=-0.039 Sum_probs=82.7
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCC--
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLS-- 78 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~-- 78 (150)
.+|.++...|++++|+..|++++..+|++...+...+.. ...+ ....++ ..+.+++..+|++.....
T Consensus 156 ~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~--------~~~~a~--~~l~~al~~~P~~~~~~~~l 225 (287)
T 3qou_A 156 LLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQA--------ADTPEI--QQLQQQVAENPEDAALATQL 225 (287)
T ss_dssp HHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHH--------TSCHHH--HHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhc--------ccCccH--HHHHHHHhcCCccHHHHHHH
Confidence 589999999999999999999999999776665555554 5555 334455 677888888888765311
Q ss_pred ------ChHHHHH----HHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Q psy3020 79 ------DPSYVQM----IKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKL 131 (150)
Q Consensus 79 ------~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 131 (150)
...+..+ .+.+..+|.. ....++..+|.++...|+.++|+..|++++..
T Consensus 226 a~~l~~~g~~~~A~~~l~~~l~~~p~~----~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~~ 284 (287)
T 3qou_A 226 ALQLHQVGRNEEALELLFGHLRXDLTA----ADGQTRXTFQEILAALGTGDALASXYRRQLYA 284 (287)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTG----GGGHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHhccccc----ccchHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 1111111 1223344433 23778999999999999999999999999863
No 173
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.89 E-value=3.6e-09 Score=65.21 Aligned_cols=64 Identities=16% Similarity=0.198 Sum_probs=57.5
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKP 75 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~ 75 (150)
.+|.+|...|++++|+..|+++++++|+++.++..+|.+ ..+| ++.+|+ ..+.+++...|++..
T Consensus 32 ~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g--------~~~~A~--~~~~~al~~~p~~~~ 96 (117)
T 3k9i_A 32 GLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLG--------RYEQGV--ELLLKIIAETSDDET 96 (117)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHHHHCCCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHHhCCCcHH
Confidence 589999999999999999999999999999999999999 9999 777888 788888888886543
No 174
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.88 E-value=9.3e-09 Score=63.73 Aligned_cols=82 Identities=11% Similarity=-0.023 Sum_probs=67.1
Q ss_pred HHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHH
Q psy3020 33 MKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNA 111 (150)
Q Consensus 33 a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~ 111 (150)
++..+|.+ ...| ++.+|+ ..+...+..+|++.. . +.++..+|.+
T Consensus 4 ~~~~~a~~~~~~~--------~~~~A~--~~~~~~~~~~p~~~~-------------------~------~~~~~~lg~~ 48 (129)
T 2xev_A 4 TAYNVAFDALKNG--------KYDDAS--QLFLSFLELYPNGVY-------------------T------PNALYWLGES 48 (129)
T ss_dssp CHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCSSSTT-------------------H------HHHHHHHHHH
T ss_pred HHHHHHHHHHHhC--------CHHHHH--HHHHHHHHHCCCCcc-------------------c------HHHHHHHHHH
Confidence 45667777 7777 667777 777777777775422 0 4788999999
Q ss_pred HHHhcCHHHHHHHHHHHHhhcCCC---cchhhcHHHHHHhc
Q psy3020 112 ALQANNFKEAIEAYSEAIKLDGTN---HILFSNRSAAFAKA 149 (150)
Q Consensus 112 ~~~~~~~~~A~~~~~~al~~~p~~---~~~~~n~a~~~~~~ 149 (150)
++..|++++|+..|+++++.+|++ +.+++++|.+|..+
T Consensus 49 ~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~ 89 (129)
T 2xev_A 49 YYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGE 89 (129)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHT
T ss_pred HHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHc
Confidence 999999999999999999999999 88899999999875
No 175
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.88 E-value=2.2e-08 Score=59.74 Aligned_cols=76 Identities=16% Similarity=0.082 Sum_probs=61.8
Q ss_pred CCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHH
Q psy3020 27 DPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLL 105 (150)
Q Consensus 27 ~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 105 (150)
+|++++++..+|.+ ...+... ...++. ..+.+++..+|++ +.++
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~-----~~~~A~--~~l~~AL~~dp~~----------------------------~rA~ 46 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQA-----MTDEVS--LLLEQALQLEPYN----------------------------EAAL 46 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTC-----CCHHHH--HHHHHHHHHCTTC----------------------------HHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCC-----CCHHHH--HHHHHHHHHCcCC----------------------------HHHH
Confidence 79999999999998 5555321 245555 6677777777764 7889
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcc
Q psy3020 106 KDKGNAALQANNFKEAIEAYSEAIKLDGTNHI 137 (150)
Q Consensus 106 ~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~ 137 (150)
..+|..+++.|+|++|+.+++++++.+|.++.
T Consensus 47 ~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 47 SLIANDHFISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 99999999999999999999999999998443
No 176
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.87 E-value=3.6e-09 Score=69.11 Aligned_cols=48 Identities=23% Similarity=0.286 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHhcCH----------HHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 102 ISLLKDKGNAALQANNF----------KEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+.+|.++|.++...+++ ++|+.+|++||+++|+++.+|+|+|.+|..+
T Consensus 36 aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~l 93 (158)
T 1zu2_A 36 ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSF 93 (158)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHh
Confidence 88999999999888775 5999999999999999999999999999864
No 177
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.86 E-value=1.1e-08 Score=63.01 Aligned_cols=84 Identities=11% Similarity=0.246 Sum_probs=69.7
Q ss_pred CCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHH
Q psy3020 28 PNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLK 106 (150)
Q Consensus 28 p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 106 (150)
|+.+.++..+|.+ ...| ++.+|+ ..+.+.+..+|++ +..+.
T Consensus 1 ~~~~~~~~~l~~~~~~~~--------~~~~A~--~~~~~a~~~~~~~----------------------------~~~~~ 42 (131)
T 1elr_A 1 GKQALKEKELGNDAYKKK--------DFDTAL--KHYDKAKELDPTN----------------------------MTYIT 42 (131)
T ss_dssp CHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC----------------------------HHHHH
T ss_pred ChHHHHHHHHHHHHHHhc--------CHHHHH--HHHHHHHhcCCcc----------------------------HHHHH
Confidence 4456788888888 8888 667777 6666666666642 67789
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhhcCCC-------cchhhcHHHHHHhc
Q psy3020 107 DKGNAALQANNFKEAIEAYSEAIKLDGTN-------HILFSNRSAAFAKA 149 (150)
Q Consensus 107 ~~g~~~~~~~~~~~A~~~~~~al~~~p~~-------~~~~~n~a~~~~~~ 149 (150)
.+|.++...|++++|+.+|.+++.++|++ +.+++++|.+|..+
T Consensus 43 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 92 (131)
T 1elr_A 43 NQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKE 92 (131)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999988 88999999998765
No 178
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.85 E-value=1.9e-08 Score=74.23 Aligned_cols=84 Identities=10% Similarity=0.190 Sum_probs=71.6
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
++|.||..+|+|++|+.+|++||+++|+++.++..+|.+ ..+| ++.+|+ ..+.+++.++|++
T Consensus 278 nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g--------~~~eA~--~~l~~Al~l~P~~------- 340 (370)
T 1ihg_A 278 NIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLK--------EYDQAL--ADLKKAQEIAPED------- 340 (370)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC-------
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHcc--------CHHHHH--HHHHHHHHhCCCC-------
Confidence 589999999999999999999999999999999999999 9999 778888 8888888888864
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHH
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIE 123 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~ 123 (150)
...+..++.++...++++++.+
T Consensus 341 ---------------------~~~~~~l~~~~~~~~~~~~a~k 362 (370)
T 1ihg_A 341 ---------------------KAIQAELLKVKQKIKAQKDKEK 362 (370)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 4556667777777777766654
No 179
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.82 E-value=1.3e-08 Score=64.60 Aligned_cols=101 Identities=13% Similarity=0.144 Sum_probs=76.2
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCc------HHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNN------EQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTK 74 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~------~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~ 74 (150)
.+|.++...|++++|+..|++++++.|.. ..++..+|.+ ..+| ++.++. ..+.+++...+...
T Consensus 54 ~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------~~~~A~--~~~~~a~~~~~~~~ 123 (164)
T 3ro3_A 54 NLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQ--------DYEKAI--DYHLKHLAIAQELK 123 (164)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHh--------hHHHHH--HHHHHHHHHHHHcc
Confidence 57999999999999999999999986653 5577888888 8888 556666 44544443222110
Q ss_pred CCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCC
Q psy3020 75 PFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGT 134 (150)
Q Consensus 75 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 134 (150)
..+ .....+..+|.++...|++++|++++.+++++.+.
T Consensus 124 ----------------~~~------~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 124 ----------------DRI------GEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp ----------------CHH------HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred ----------------chH------hHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 001 12678899999999999999999999999998764
No 180
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.80 E-value=2.2e-08 Score=61.23 Aligned_cols=48 Identities=15% Similarity=0.194 Sum_probs=46.0
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
+..|..+|.+++..|++++|+.+|.++++++|+++.+|+++|.+|..+
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 66 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQ 66 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHc
Confidence 788999999999999999999999999999999999999999999875
No 181
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.77 E-value=2.7e-08 Score=66.08 Aligned_cols=103 Identities=15% Similarity=0.088 Sum_probs=76.6
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhcc---CCC----cHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKL---DPN----NEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRT 73 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~---~p~----~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~ 73 (150)
.+|.++...|++++|+..|++++++ .|+ ...++..++.+ ..+| ++.++. ..+.+.+...+..
T Consensus 71 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g--------~~~~A~--~~~~~al~~~~~~ 140 (203)
T 3gw4_A 71 QVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFG--------DLAGAR--QEYEKSLVYAQQA 140 (203)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhC--------CHHHHH--HHHHHHHHHHHhc
Confidence 5799999999999999999999998 443 35577888999 8888 556666 4454444322211
Q ss_pred CCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCc
Q psy3020 74 KPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNH 136 (150)
Q Consensus 74 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~ 136 (150)
.. .. .....+..+|.++...|++++|++++.+++++.....
T Consensus 141 ~~----------------~~------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 181 (203)
T 3gw4_A 141 DD----------------QV------AIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELE 181 (203)
T ss_dssp TC----------------HH------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred cc----------------hH------HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcC
Confidence 00 00 1156788999999999999999999999999876543
No 182
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.77 E-value=7.4e-08 Score=73.70 Aligned_cols=124 Identities=10% Similarity=0.078 Sum_probs=89.7
Q ss_pred hCCHH-------HHHHHHHHhhc-cCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCC--CCC
Q psy3020 10 LGRYK-------ESISTYEEGLK-LDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKP--FLS 78 (150)
Q Consensus 10 ~~~~~-------~A~~~~~~aL~-~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~--~~~ 78 (150)
.|+++ +|+..|++|++ ++|++..+|..++.+ ...| .+.++. ..+.+++...|.+.. +..
T Consensus 292 ~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g--------~~~~A~--~~~~~al~~~p~~~~~~~~~ 361 (530)
T 2ooe_A 292 KGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRM--------KYEKVH--SIYNRLLAIEDIDPTLVYIQ 361 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHSSSSCHHHHHHH
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcC--------CHHHHH--HHHHHHhCccccCchHHHHH
Confidence 68987 99999999998 899999999999999 8888 667777 788888888887532 110
Q ss_pred ChHHHHHHHH-----------HhcCcchhhhHHHhHHHHHHHHHH-HHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHH
Q psy3020 79 DPSYVQMIKE-----------IQKDPSLMTLEAKISLLKDKGNAA-LQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAF 146 (150)
Q Consensus 79 ~~~~~~~~~~-----------l~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~ 146 (150)
-..+....+. +...|.. ...+...+.+. ...|++++|..+|+++++.+|+++.+|.+.+.++
T Consensus 362 ~~~~~~~~~~~~~A~~~~~~Al~~~~~~------~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~ 435 (530)
T 2ooe_A 362 YMKFARRAEGIKSGRMIFKKAREDARTR------HHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYL 435 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCTTCC------THHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHhccCCc------hHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 0011111111 1112211 34445555553 3589999999999999999999999999999887
Q ss_pred Hhc
Q psy3020 147 AKA 149 (150)
Q Consensus 147 ~~~ 149 (150)
..+
T Consensus 436 ~~~ 438 (530)
T 2ooe_A 436 SHL 438 (530)
T ss_dssp TTT
T ss_pred HhC
Confidence 654
No 183
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.73 E-value=5.8e-08 Score=70.70 Aligned_cols=116 Identities=11% Similarity=0.021 Sum_probs=86.1
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHH-----HHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQ-----MKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKP 75 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~-----a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~ 75 (150)
..|.++...|++++|+..+++++...|.+.. ++..++.+ ...| ++.++. ..+.+++...|....
T Consensus 19 ~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g--------~~~~A~--~~~~~al~~~~~~~~ 88 (373)
T 1hz4_A 19 LRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKG--------ELTRSL--ALMQQTEQMARQHDV 88 (373)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcC--------cHHHHH--HHHHHHHHHHHhcCc
Confidence 3578889999999999999999999886532 56677777 7788 556666 555555544443211
Q ss_pred CCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc--------CCCcchhhcHHHHHH
Q psy3020 76 FLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLD--------GTNHILFSNRSAAFA 147 (150)
Q Consensus 76 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~n~a~~~~ 147 (150)
. . .....+..+|.++...|++++|++.|.+++++. |....++.++|.++.
T Consensus 89 ~-----~-----------------~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~ 146 (373)
T 1hz4_A 89 W-----H-----------------YALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLW 146 (373)
T ss_dssp H-----H-----------------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHH
T ss_pred H-----H-----------------HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHH
Confidence 0 0 115667889999999999999999999999987 334567788998887
Q ss_pred hc
Q psy3020 148 KA 149 (150)
Q Consensus 148 ~~ 149 (150)
.+
T Consensus 147 ~~ 148 (373)
T 1hz4_A 147 AW 148 (373)
T ss_dssp HT
T ss_pred Hh
Confidence 64
No 184
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.69 E-value=3.5e-07 Score=65.94 Aligned_cols=131 Identities=15% Similarity=0.035 Sum_probs=87.8
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCC--CcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCC-----C
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDP--NNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPR-----T 73 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p--~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~-----~ 73 (150)
.+|.++...|++++|++.+.++|..+| ++.++...++.+ ..+|+. ..|. ..+.+....+|+ +
T Consensus 105 ~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~--------d~A~--k~l~~~~~~~~d~~~~~d 174 (310)
T 3mv2_B 105 LLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNV--------STAS--TIFDNYTNAIEDTVSGDN 174 (310)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCH--------HHHH--HHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCH--------HHHH--HHHHHHHhcCccccccch
Confidence 478999999999999999999999998 899999999999 888944 4444 444444455551 2
Q ss_pred CCCC-----------C--C-hHHHHHHHHHh-cCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhh-------
Q psy3020 74 KPFL-----------S--D-PSYVQMIKEIQ-KDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKL------- 131 (150)
Q Consensus 74 ~~~~-----------~--~-~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------- 131 (150)
.... . + ......++.+. +.|+. .....+.+ ++.++|++++|.+.++.+++.
T Consensus 175 ~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~----~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k 247 (310)
T 3mv2_B 175 EMILNLAESYIKFATNKETATSNFYYYEELSQTFPTW----KTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQK 247 (310)
T ss_dssp HHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSH----HHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTC
T ss_pred HHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCc----ccHHHHHH---HHHHcCCHHHHHHHHHHHHHhccccccc
Confidence 1110 0 0 01111122221 22210 00222222 788999999999999988887
Q ss_pred ---cCCCcchhhcHHHHHHhc
Q psy3020 132 ---DGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 132 ---~p~~~~~~~n~a~~~~~~ 149 (150)
+|+++.++.|++.+...+
T Consensus 248 ~~~~p~~~~~LaN~i~l~~~l 268 (310)
T 3mv2_B 248 ENAVLYKPTFLANQITLALMQ 268 (310)
T ss_dssp HHHHSSHHHHHHHHHHHHHHT
T ss_pred ccCCCCCHHHHHHHHHHHHHh
Confidence 599999999998776543
No 185
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.68 E-value=1.9e-07 Score=55.25 Aligned_cols=67 Identities=22% Similarity=0.227 Sum_probs=53.5
Q ss_pred HHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhhHHHhH-HHHHHHHHHH
Q psy3020 36 AIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKIS-LLKDKGNAAL 113 (150)
Q Consensus 36 ~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~g~~~~ 113 (150)
.+|.+ ...| ++.+|+ ..+.+++..+|++ +. .|..+|.+++
T Consensus 5 ~~a~~~~~~~--------~~~~A~--~~~~~al~~~p~~----------------------------~~~~~~~lg~~~~ 46 (99)
T 2kc7_A 5 KTIKELINQG--------DIENAL--QALEEFLQTEPVG----------------------------KDEAYYLMGNAYR 46 (99)
T ss_dssp HHHHHHHHHT--------CHHHHH--HHHHHHHHHCSST----------------------------HHHHHHHHHHHHH
T ss_pred HHHHHHHHcC--------CHHHHH--HHHHHHHHHCCCc----------------------------HHHHHHHHHHHHH
Confidence 34555 5666 566666 6666666666643 66 8999999999
Q ss_pred HhcCHHHHHHHHHHHHhhcCCCcchhh
Q psy3020 114 QANNFKEAIEAYSEAIKLDGTNHILFS 140 (150)
Q Consensus 114 ~~~~~~~A~~~~~~al~~~p~~~~~~~ 140 (150)
..|++++|+++|.++++++|+++.++.
T Consensus 47 ~~~~~~~A~~~~~~al~~~p~~~~~~~ 73 (99)
T 2kc7_A 47 KLGDWQKALNNYQSAIELNPDSPALQA 73 (99)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTSTHHHH
T ss_pred HcCCHHHHHHHHHHHHhcCCCcHHHHH
Confidence 999999999999999999999998883
No 186
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.67 E-value=2.4e-07 Score=59.98 Aligned_cols=101 Identities=5% Similarity=-0.046 Sum_probs=74.7
Q ss_pred CCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHH
Q psy3020 11 GRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEI 89 (150)
Q Consensus 11 ~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 89 (150)
+....+.+.|.+.++.+|.+.++.+.++-+ ..++... ++.+++ .-+...++.+
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~-----~~~~gI--~lLe~ll~~~------------------- 65 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYND-----DIRKGI--VLLEELLPKG------------------- 65 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHH-----HHHHHH--HHHHHHHHHS-------------------
T ss_pred HHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHH-----HHHHHH--HHHHHHHhcC-------------------
Confidence 345678899999999999999999999887 5555322 344444 3333333333
Q ss_pred hcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHH
Q psy3020 90 QKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSA 144 (150)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~ 144 (150)
.|+ .+.+.++++|..+++.|+|++|.++++++|+++|+|..+..-+-.
T Consensus 66 --~p~-----~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ 113 (152)
T 1pc2_A 66 --SKE-----EQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERL 113 (152)
T ss_dssp --CHH-----HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred --Ccc-----chHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 010 227889999999999999999999999999999999887665443
No 187
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.67 E-value=4.6e-08 Score=58.85 Aligned_cols=55 Identities=16% Similarity=0.180 Sum_probs=43.8
Q ss_pred HhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCC------cchhhcHHHHHHhc
Q psy3020 89 IQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTN------HILFSNRSAAFAKA 149 (150)
Q Consensus 89 l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~n~a~~~~~~ 149 (150)
+..+|.. +..|..+|.+++..|++++|+++|+++++++|++ ..+++++|.++..+
T Consensus 31 l~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~ 91 (111)
T 2l6j_A 31 ITAQPQN------PVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQGAV 91 (111)
T ss_dssp HHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCC------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHH
Confidence 4455555 7888888888888888888888888888888888 77888888887654
No 188
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.67 E-value=2.7e-07 Score=65.73 Aligned_cols=103 Identities=9% Similarity=-0.104 Sum_probs=79.9
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccC-CCc-HHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLD-PNN-EQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLS 78 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~-p~~-~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~ 78 (150)
.+|.++.+.++|++|+..|+++++.. |.. ..++..+|.+ ..+| .+.+|+ .-+.+++... .
T Consensus 140 ~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG--------~~~eAl--~~l~~a~~g~-~------ 202 (282)
T 4f3v_A 140 MKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLA--------LFTEAE--RRLTEANDSP-A------ 202 (282)
T ss_dssp HHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHTST-T------
T ss_pred HHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCC--------CHHHHH--HHHHHHhcCC-C------
Confidence 47889999999999999999998864 322 3588999999 9999 667777 5555444221 1
Q ss_pred ChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhh
Q psy3020 79 DPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFS 140 (150)
Q Consensus 79 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 140 (150)
+|.. .+.++..+|.++.++|+.++|...|++++..+|+ +.++.
T Consensus 203 -------------~P~~-----~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~ 245 (282)
T 4f3v_A 203 -------------GEAC-----ARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAA 245 (282)
T ss_dssp -------------TTTT-----HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHH
T ss_pred -------------Cccc-----cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHH
Confidence 0110 1678999999999999999999999999999998 66544
No 189
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.66 E-value=2.8e-07 Score=69.57 Aligned_cols=127 Identities=9% Similarity=-0.009 Sum_probs=87.8
Q ss_pred hhhHHHHhhC---CHHHHHHHHHHhhccCCCcHHHHHHHHHH-Hh-hhhccCCCCCchhhhhCChHHHHhhccCCCCCCC
Q psy3020 2 TTYSCLSYLG---RYKESISTYEEGLKLDPNNEQMKEAIKDV-RN-QEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPF 76 (150)
Q Consensus 2 ~lg~~~~~~~---~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~-~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~ 76 (150)
.+|.+|...| ++++|++.|+++.+..|.++.++..++.+ .. .+-.+ ++.+++ .-+.++. |++...
T Consensus 181 ~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~-----d~~~A~--~~~~~aa---~g~~~a 250 (452)
T 3e4b_A 181 ELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTP-----DEKTAQ--ALLEKIA---PGYPAS 250 (452)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSC-----CHHHHH--HHHHHHG---GGSTHH
T ss_pred HHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCC-----CHHHHH--HHHHHHc---CCCHHH
Confidence 5788899999 99999999999999999999988888888 33 22212 666776 5555444 544432
Q ss_pred CCChHHHHHHHHH-h--cCcchhhh----------HHHhHHHHHHHHHHHHhc-----CHHHHHHHHHHHHhhcCCCcch
Q psy3020 77 LSDPSYVQMIKEI-Q--KDPSLMTL----------EAKISLLKDKGNAALQAN-----NFKEAIEAYSEAIKLDGTNHIL 138 (150)
Q Consensus 77 ~~~~~~~~~~~~l-~--~~~~~~~~----------~~~~~~~~~~g~~~~~~~-----~~~~A~~~~~~al~~~p~~~~~ 138 (150)
. ..+..+ . .......+ ...+.++..+|.++. .| ++++|+++|++++ |.++.+
T Consensus 251 ~------~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A 320 (452)
T 3e4b_A 251 W------VSLAQLLYDFPELGDVEQMMKYLDNGRAADQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAA 320 (452)
T ss_dssp H------HHHHHHHHHSGGGCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHH
T ss_pred H------HHHHHHHHhCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHH
Confidence 1 011100 0 00111111 011788899998887 55 9999999999999 999999
Q ss_pred hhcHHHHHHh
Q psy3020 139 FSNRSAAFAK 148 (150)
Q Consensus 139 ~~n~a~~~~~ 148 (150)
++++|.+|..
T Consensus 321 ~~~Lg~~y~~ 330 (452)
T 3e4b_A 321 DYYLGQIYRR 330 (452)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHC
Confidence 9999998864
No 190
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.65 E-value=2.2e-07 Score=68.35 Aligned_cols=124 Identities=13% Similarity=-0.003 Sum_probs=73.1
Q ss_pred hHHHHhhC---CHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCC-----chhhhhCChHHHHhhccCCCCC
Q psy3020 4 YSCLSYLG---RYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGD-----PFANLFSDPNIFVQLQLDPRTK 74 (150)
Q Consensus 4 g~~~~~~~---~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~-----~~~~a~~~~~~~~~l~~~~~~~ 74 (150)
|..+...+ .+.+|+.+|++|+++||+++.++-.++.+ ...... .++. ....++ . ....+..+|...
T Consensus 203 a~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~--~~~~~~~~~~l~~a~--~-a~~a~~~~~~~a 277 (372)
T 3ly7_A 203 AHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQ--HPLDEKQLAALNTEI--D-NIVTLPELNNLS 277 (372)
T ss_dssp HHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH--SCCCHHHHHHHHHHH--H-HHHTCGGGTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhcc--CCCchhhHHHHHHHH--H-HHHhcccCCcCH
Confidence 44444443 35789999999999999999999877666 322111 1111 111122 1 112334455444
Q ss_pred CCCCC--------hHHHHHH----HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchh
Q psy3020 75 PFLSD--------PSYVQMI----KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILF 139 (150)
Q Consensus 75 ~~~~~--------~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 139 (150)
..+.. ..+...+ +.+..+| .+.+|..+|.++...|++++|++.|.+|+.++|..+..+
T Consensus 278 ~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~-------s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~ 347 (372)
T 3ly7_A 278 IIYQIKAVSALVKGKTDESYQAINTGIDLEM-------SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLY 347 (372)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC-------CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHH
Confidence 32100 0011111 1122222 156778899999999999999999999999999876443
No 191
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.63 E-value=2.1e-07 Score=70.25 Aligned_cols=127 Identities=8% Similarity=-0.064 Sum_probs=83.9
Q ss_pred hhhHHHHhh----CCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCC
Q psy3020 2 TTYSCLSYL----GRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPF 76 (150)
Q Consensus 2 ~lg~~~~~~----~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~ 76 (150)
.+|.+|... +++++|+..|+++. |+++.++..++.+ ....... ++.+++ .-+.++.... +...
T Consensus 218 ~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~-----d~~~A~--~~~~~Aa~~g--~~~A 285 (452)
T 3e4b_A 218 SVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELG-----DVEQMM--KYLDNGRAAD--QPRA 285 (452)
T ss_dssp HHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGC-----CHHHHH--HHHHHHHHTT--CHHH
T ss_pred HHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCC-----CHHHHH--HHHHHHHHCC--CHHH
Confidence 477777666 79999999999998 8999999999887 4211122 566666 5555544322 2111
Q ss_pred CC------------ChHHHHHHHHHhcC-cchhhhHHHhHHHHHHHHHHHH----hcCHHHHHHHHHHHHhhcCCCcchh
Q psy3020 77 LS------------DPSYVQMIKEIQKD-PSLMTLEAKISLLKDKGNAALQ----ANNFKEAIEAYSEAIKLDGTNHILF 139 (150)
Q Consensus 77 ~~------------~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~ 139 (150)
.. ...+...+.-+.+. +.. +.++.++|.++.. ..++++|++.|+++.+ +.++.+.
T Consensus 286 ~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~g~------~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~--~g~~~A~ 357 (452)
T 3e4b_A 286 ELLLGKLYYEGKWVPADAKAAEAHFEKAVGRE------VAADYYLGQIYRRGYLGKVYPQKALDHLLTAAR--NGQNSAD 357 (452)
T ss_dssp HHHHHHHHHHCSSSCCCHHHHHHHHHTTTTTC------HHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHT--TTCTTHH
T ss_pred HHHHHHHHHcCCCCCCCHHHHHHHHHHHhCCC------HHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHh--hChHHHH
Confidence 00 00112222222211 222 7899999988876 4499999999999987 5679999
Q ss_pred hcHHHHHHh
Q psy3020 140 SNRSAAFAK 148 (150)
Q Consensus 140 ~n~a~~~~~ 148 (150)
+++|.+|..
T Consensus 358 ~~Lg~~y~~ 366 (452)
T 3e4b_A 358 FAIAQLFSQ 366 (452)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHHh
Confidence 999999864
No 192
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.62 E-value=1.5e-07 Score=69.62 Aligned_cols=137 Identities=12% Similarity=0.028 Sum_probs=79.6
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCCcHH-----------------HHHHHHHH-HhhhhccCCCCCchhhhhCChHHH
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPNNEQ-----------------MKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIF 64 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~-----------------a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~ 64 (150)
-|..+...|+|++|++.|.++++.+|+... +...++.+ ...|+ +.++. ..+.
T Consensus 10 ~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~--------~~~a~--~~~~ 79 (434)
T 4b4t_Q 10 EARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGA--------KDKLR--EFIP 79 (434)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTC--------HHHHH--HHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCC--------HHHHH--HHHH
Confidence 367788999999999999999999998643 46788888 88884 44444 3443
Q ss_pred HhhccCCCCCCCCCChHHHHHHHHHhcCcchhhh------------------HHHhHHHHHHHHHHHHhcCHHHHHHHHH
Q psy3020 65 VQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTL------------------EAKISLLKDKGNAALQANNFKEAIEAYS 126 (150)
Q Consensus 65 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------------------~~~~~~~~~~g~~~~~~~~~~~A~~~~~ 126 (150)
..+...+..........+...+..+...+..... ......+..+|.++...|+|++|+..+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~ 159 (434)
T 4b4t_Q 80 HSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALIN 159 (434)
T ss_dssp HTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHH
Confidence 3333333221100000011111111111111111 0115566777888888888888888888
Q ss_pred HHHhhc------CCCcchhhcHHHHHHhc
Q psy3020 127 EAIKLD------GTNHILFSNRSAAFAKA 149 (150)
Q Consensus 127 ~al~~~------p~~~~~~~n~a~~~~~~ 149 (150)
+++... |....++.+.|.+|..+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (434)
T 4b4t_Q 160 DLLREFKKLDDKPSLVDVHLLESKVYHKL 188 (434)
T ss_dssp HHHHHHTTSSCSTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcccchhHHHHHHHHHHHHHHh
Confidence 777652 33345667777766543
No 193
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.61 E-value=6.3e-07 Score=67.87 Aligned_cols=45 Identities=16% Similarity=0.008 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHHH----hcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 102 ISLLKDKGNAALQ----ANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 102 ~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
+.++..+|.++.. .+++++|+++|+++++.. ++.+++++|.+|..
T Consensus 363 ~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~Lg~~y~~ 411 (490)
T 2xm6_A 363 KAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQLGEIYYY 411 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHc
Confidence 6778888888887 788888888888888754 57888888888765
No 194
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.60 E-value=3.8e-07 Score=66.33 Aligned_cols=58 Identities=10% Similarity=0.063 Sum_probs=43.2
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcH------HHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhcc
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNE------QMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQL 69 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~------~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~ 69 (150)
.+|.++...|++++|+..|++++++.|... .++..++.+ ...| ++.++. ..+.+.+..
T Consensus 58 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G--------~~~~A~--~~~~~al~~ 122 (373)
T 1hz4_A 58 VLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQG--------FLQTAW--ETQEKAFQL 122 (373)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHH
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCC--------CHHHHH--HHHHHHHHH
Confidence 478899999999999999999999876432 235677888 8888 556666 555555443
No 195
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.56 E-value=1.1e-06 Score=66.52 Aligned_cols=130 Identities=9% Similarity=0.004 Sum_probs=85.0
Q ss_pred hhhHHHHh----hCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-Hh-hhhccCCCCCchhhhhCChHHHHhhccCCCCCC
Q psy3020 2 TTYSCLSY----LGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RN-QEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKP 75 (150)
Q Consensus 2 ~lg~~~~~----~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~-~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~ 75 (150)
.+|.+|.. .+++++|+..|+++++. +++.++..+|.+ .. .|-.. ++.+|+ .-+.++.... +..
T Consensus 44 ~lg~~y~~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~-----~~~~A~--~~~~~a~~~~--~~~ 112 (490)
T 2xm6_A 44 ELGYRYFQGNETTKDLTQAMDWFRRAAEQ--GYTPAEYVLGLRYMNGEGVPQ-----DYAQAV--IWYKKAALKG--LPQ 112 (490)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCC-----CHHHHH--HHHHHHHHTT--CHH
T ss_pred HHHHHHHcCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCC-----CHHHHH--HHHHHHHHCC--CHH
Confidence 47888888 89999999999999876 788999999988 44 22111 556666 5555544322 111
Q ss_pred CC--------C----ChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHH----hcCHHHHHHHHHHHHhhcCCCcchh
Q psy3020 76 FL--------S----DPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQ----ANNFKEAIEAYSEAIKLDGTNHILF 139 (150)
Q Consensus 76 ~~--------~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~ 139 (150)
.. . ...+...+.-+.+... ...+.++..+|.++.. .+++++|++.|+++++. +++.++
T Consensus 113 a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~----~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~--~~~~a~ 186 (490)
T 2xm6_A 113 AQQNLGVMYHEGNGVKVDKAESVKWFRLAAE----QGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ--GNVWSC 186 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH----CCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHH
Confidence 00 0 0001111111100000 0117788999999987 88999999999999886 578999
Q ss_pred hcHHHHHHh
Q psy3020 140 SNRSAAFAK 148 (150)
Q Consensus 140 ~n~a~~~~~ 148 (150)
+++|.+|..
T Consensus 187 ~~Lg~~y~~ 195 (490)
T 2xm6_A 187 NQLGYMYSR 195 (490)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999999875
No 196
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.49 E-value=1.4e-06 Score=65.70 Aligned_cols=44 Identities=20% Similarity=0.280 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 105 LKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 105 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
...+...+.+.|.+++|+..+++++.++|-+...|..+|++|.+
T Consensus 210 l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~k 253 (449)
T 1b89_A 210 LEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSK 253 (449)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHh
Confidence 44577788899999999999999999999999999999999875
No 197
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.48 E-value=1.8e-06 Score=54.80 Aligned_cols=99 Identities=11% Similarity=-0.000 Sum_probs=60.8
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-Hh-hhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCCh
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RN-QEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDP 80 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~-~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 80 (150)
+|.+|...+.+++|++.|++|.+. +++.+...++.+ .. .|-.+ ++.+++ .-+.++...
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~-----d~~~A~--~~~~~Aa~~----------- 90 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKK-----DLRKAA--QYYSKACGL----------- 90 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCC-----CHHHHH--HHHHHHHHT-----------
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCc-----cHHHHH--HHHHHHHcC-----------
Confidence 566677777777777777777765 567777777766 22 22111 444444 222222211
Q ss_pred HHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHH----hcCHHHHHHHHHHHHhhcCCCcchhhcH
Q psy3020 81 SYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQ----ANNFKEAIEAYSEAIKLDGTNHILFSNR 142 (150)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~n~ 142 (150)
.. +.++.++|.++.. .+++++|++.|+++.+... +.+..++
T Consensus 91 -----------g~--------~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~--~~A~~~l 135 (138)
T 1klx_A 91 -----------ND--------QDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGS--EDACGIL 135 (138)
T ss_dssp -----------TC--------HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC--HHHHHHC
T ss_pred -----------CC--------HHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCCC--HHHHHHH
Confidence 11 6778888888887 7888888888888888743 4444443
No 198
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.46 E-value=6.4e-07 Score=68.51 Aligned_cols=113 Identities=12% Similarity=0.029 Sum_probs=79.0
Q ss_pred HHHHhhCCHHHHHHHHHHhhcc-----CCCcHH---HHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCC
Q psy3020 5 SCLSYLGRYKESISTYEEGLKL-----DPNNEQ---MKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKP 75 (150)
Q Consensus 5 ~~~~~~~~~~~A~~~~~~aL~~-----~p~~~~---a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~ 75 (150)
..+...|+|++|+..|+++|++ .|+++. .+..|+.+ ..+| ++.+|. ..+.+++.+.-
T Consensus 317 ~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g--------~~~eA~--~~~~~aL~i~~---- 382 (490)
T 3n71_A 317 DKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQ--------AYEEAS--HYARRMVDGYM---- 382 (490)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHH----
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhc--------CHHHHH--HHHHHHHHHHH----
Confidence 4467899999999999999984 455554 56777888 8888 566666 44444432110
Q ss_pred CCCChHHHHHHHHHh-cCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhh-----cCCCc---chhhcHHHHH
Q psy3020 76 FLSDPSYVQMIKEIQ-KDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKL-----DGTNH---ILFSNRSAAF 146 (150)
Q Consensus 76 ~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~~---~~~~n~a~~~ 146 (150)
..+. ..|+- ...+.++|.++..+|+|++|+..|.+|+++ -|++| ....+++.++
T Consensus 383 -----------~~lG~~Hp~~------a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~ 445 (490)
T 3n71_A 383 -----------KLYHHNNAQL------GMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTE 445 (490)
T ss_dssp -----------HHSCTTCHHH------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHH
T ss_pred -----------HHcCCCCHHH------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHH
Confidence 0011 11211 788999999999999999999999999974 46654 4456777776
Q ss_pred Hh
Q psy3020 147 AK 148 (150)
Q Consensus 147 ~~ 148 (150)
.+
T Consensus 446 ~e 447 (490)
T 3n71_A 446 ME 447 (490)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 199
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.39 E-value=3.3e-06 Score=71.28 Aligned_cols=56 Identities=11% Similarity=0.115 Sum_probs=45.3
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPR 72 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~ 72 (150)
.+|.++...|++++|+++|.+| +++.++..++.+ ...| ++++++ .-+..+....++
T Consensus 1110 qLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lG--------kyEEAI--eyL~mArk~~~e 1166 (1630)
T 1xi4_A 1110 QLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSG--------NWEELV--KYLQMARKKARE 1166 (1630)
T ss_pred HHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHhhccc
Confidence 5799999999999999999886 889999999999 9999 666666 566555555543
No 200
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.38 E-value=3.3e-06 Score=53.53 Aligned_cols=92 Identities=16% Similarity=0.072 Sum_probs=68.7
Q ss_pred CCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHHH
Q psy3020 11 GRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEI 89 (150)
Q Consensus 11 ~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 89 (150)
+++++|++.|+++.+..+..+. ++.+ ...+ ...+++ .-+.++...
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~a~----lg~~y~~g~--------~~~~A~--~~~~~Aa~~-------------------- 54 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMFGC----LSLVSNSQI--------NKQKLF--QYLSKACEL-------------------- 54 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHH----HHHHTCTTS--------CHHHHH--HHHHHHHHT--------------------
T ss_pred cCHHHHHHHHHHHHcCCCHhhh----HHHHHHcCC--------CHHHHH--HHHHHHHcC--------------------
Confidence 5789999999999998754444 7777 4333 223344 333222221
Q ss_pred hcCcchhhhHHHhHHHHHHHHHHHH----hcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 90 QKDPSLMTLEAKISLLKDKGNAALQ----ANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
+. +.++.++|.++.. .+++++|++.|+++.+. .++.+++++|.+|..
T Consensus 55 --g~--------~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 55 --NS--------GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp --TC--------HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred --CC--------HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 11 7889999999998 89999999999999987 679999999999975
No 201
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.35 E-value=1.6e-06 Score=65.39 Aligned_cols=99 Identities=12% Similarity=0.031 Sum_probs=70.0
Q ss_pred HhhCCHHHHHHHHHHhhc-----cCCCcHH---HHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCC
Q psy3020 8 SYLGRYKESISTYEEGLK-----LDPNNEQ---MKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLS 78 (150)
Q Consensus 8 ~~~~~~~~A~~~~~~aL~-----~~p~~~~---a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~ 78 (150)
...|+|++|+..|+++|+ +.|+++. .+..++.+ ..+| ++.+|. +.+.+.+.+.-
T Consensus 309 ~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g--------~~~eA~--~~~~~aL~i~~------- 371 (433)
T 3qww_A 309 KHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQ--------DWEGAL--KYGQKIIKPYS------- 371 (433)
T ss_dssp TTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHH-------
T ss_pred hhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhc--------CHHHHH--HHHHHHHHHHH-------
Confidence 356899999999999998 4677765 45677888 8888 566666 44444432110
Q ss_pred ChHHHHHHHHHh-cCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhh-----cCCCcc
Q psy3020 79 DPSYVQMIKEIQ-KDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKL-----DGTNHI 137 (150)
Q Consensus 79 ~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~~~ 137 (150)
..+. ..|+- +..+.++|.++..+|+|++|+..|++|+++ -|++|.
T Consensus 372 --------~~lG~~Hp~~------a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~ 422 (433)
T 3qww_A 372 --------KHYPVYSLNV------ASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPY 422 (433)
T ss_dssp --------HHSCSSCHHH------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHH
T ss_pred --------HHcCCCChHH------HHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChH
Confidence 0011 11211 788999999999999999999999999985 465553
No 202
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.34 E-value=4.1e-06 Score=50.56 Aligned_cols=42 Identities=19% Similarity=0.202 Sum_probs=40.2
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHH
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRS 143 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a 143 (150)
+..+..+|.++++.|+++.|+..++++++++|+++.+..|++
T Consensus 46 ~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 46 VSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLK 87 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhhHH
Confidence 788999999999999999999999999999999999988887
No 203
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.29 E-value=2.3e-06 Score=50.84 Aligned_cols=61 Identities=21% Similarity=0.219 Sum_probs=53.6
Q ss_pred hhhHHHHhhCC---HHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCC
Q psy3020 2 TTYSCLSYLGR---YKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPR 72 (150)
Q Consensus 2 ~lg~~~~~~~~---~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~ 72 (150)
.+|.+++..++ .++|...+++||++||+++.+...+|.. ...| ++.+|+ ..+.+.+..+|.
T Consensus 11 ~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g--------~y~~Ai--~~w~~~l~~~p~ 75 (93)
T 3bee_A 11 AKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISF--------RFQEAI--DTWVLLLDSNDP 75 (93)
T ss_dssp HHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHTCCCT
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHhhCCC
Confidence 35777765555 7999999999999999999999999999 9999 778888 888888998988
No 204
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.28 E-value=3.6e-06 Score=63.35 Aligned_cols=113 Identities=11% Similarity=-0.001 Sum_probs=78.4
Q ss_pred HHHhhCCHHHHHHHHHHhhcc-----CCCcHH---HHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCC
Q psy3020 6 CLSYLGRYKESISTYEEGLKL-----DPNNEQ---MKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPF 76 (150)
Q Consensus 6 ~~~~~~~~~~A~~~~~~aL~~-----~p~~~~---a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~ 76 (150)
-+...|+|++|+..|+++|++ .|+++. .+..++.+ ..+| ++.+|+ ..+.+.+.+.-.
T Consensus 296 ~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g--------~~~eA~--~~~~~~L~i~~~---- 361 (429)
T 3qwp_A 296 ELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLG--------LLEEAL--FYGTRTMEPYRI---- 361 (429)
T ss_dssp HHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHHHHHH----
T ss_pred HHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhc--------cHHHHH--HHHHHHHHhHHH----
Confidence 355789999999999999974 566665 45677777 7888 556666 444433321100
Q ss_pred CCChHHHHHHHHHh-cCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhh-----cCCCc---chhhcHHHHHH
Q psy3020 77 LSDPSYVQMIKEIQ-KDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKL-----DGTNH---ILFSNRSAAFA 147 (150)
Q Consensus 77 ~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~~---~~~~n~a~~~~ 147 (150)
.+. ..|.- ...+.++|.++..+|++++|+..|++|+++ -|++| .++.+++.|..
T Consensus 362 -----------~lg~~Hp~~------a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~ 424 (429)
T 3qwp_A 362 -----------FFPGSHPVR------GVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDA 424 (429)
T ss_dssp -----------HSCSSCHHH------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHH
T ss_pred -----------HcCCCChHH------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Confidence 000 11211 788999999999999999999999999984 45554 55577777766
Q ss_pred hc
Q psy3020 148 KA 149 (150)
Q Consensus 148 ~~ 149 (150)
++
T Consensus 425 e~ 426 (429)
T 3qwp_A 425 NI 426 (429)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 205
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.21 E-value=1.2e-05 Score=67.97 Aligned_cols=118 Identities=12% Similarity=0.051 Sum_probs=83.2
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCC-----
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKP----- 75 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~----- 75 (150)
.+|.+++..|+|++|+..|.+| ..|..++.+ ..+| ++.+|+ ..+.++. ++....
T Consensus 1200 ~iGd~le~eg~YeeA~~~Y~kA--------~ny~rLA~tLvkLg--------e~q~AI--EaarKA~--n~~aWkev~~a 1259 (1630)
T 1xi4_A 1200 QVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLG--------EYQAAV--DGARKAN--STRTWKEVCFA 1259 (1630)
T ss_pred HHHHHHHhcCCHHHHHHHHHhh--------hHHHHHHHHHHHhC--------CHHHHH--HHHHHhC--CHHHHHHHHHH
Confidence 4799999999999999999996 477788888 7888 555665 4444332 221110
Q ss_pred CCCChHHHHHHH---HHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 76 FLSDPSYVQMIK---EIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 76 ~~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
......|..+.. .+... ++.+..++..+...|.|++|+..+++++.++|.+...|..+|.+|.+
T Consensus 1260 cve~~Ef~LA~~cgl~Iiv~---------~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaK 1326 (1630)
T 1xi4_A 1260 CVDGKEFRLAQMCGLHIVVH---------ADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSK 1326 (1630)
T ss_pred HhhhhHHHHHHHHHHhhhcC---------HHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHh
Confidence 011111111110 12122 55677888899999999999999999999999999999999999875
No 206
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.18 E-value=3.6e-06 Score=62.12 Aligned_cols=124 Identities=8% Similarity=0.012 Sum_probs=75.0
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHH------HHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQM------KEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTK 74 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a------~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~ 74 (150)
.+|.+|...|++++|++.|++++++.+....+ ...++.+ ...| .+..+. ..+..++...+...
T Consensus 60 ~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------~~~~a~--~~~~~~~~~~~~~~ 129 (434)
T 4b4t_Q 60 ELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPD--------SLDDQI--FVCEKSIEFAKREK 129 (434)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCS--------CHHHHH--HHHHHHHHHHHHSS
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCC--------CHHHHH--HHHHHHHHHHHHhC
Confidence 48999999999999999999999987765443 2334444 4444 344444 33333333222211
Q ss_pred CCCC--------------ChHHHHHHH-------HHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q psy3020 75 PFLS--------------DPSYVQMIK-------EIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDG 133 (150)
Q Consensus 75 ~~~~--------------~~~~~~~~~-------~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p 133 (150)
.... .+.+..++. ......+. +.....+...|.++...|+|++|...|++++.+.|
T Consensus 130 ~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 130 RVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDK---PSLVDVHLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp CCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCS---THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccc---hhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 1000 001111111 11111100 13378999999999999999999999999999877
Q ss_pred CCcch
Q psy3020 134 TNHIL 138 (150)
Q Consensus 134 ~~~~~ 138 (150)
.....
T Consensus 207 ~~~~~ 211 (434)
T 4b4t_Q 207 SIYCP 211 (434)
T ss_dssp HSCCC
T ss_pred cCCCc
Confidence 65433
No 207
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.12 E-value=7e-06 Score=49.51 Aligned_cols=65 Identities=12% Similarity=0.019 Sum_probs=56.7
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccC-------CCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLD-------PNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRT 73 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~-------p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~ 73 (150)
.||..++..++|+.|+..|++|++.. +..+.++..++.+ ..+| ++..|+ ..+.+++.++|++
T Consensus 10 ~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g--------~~~~A~--~~~~~al~l~P~~ 79 (104)
T 2v5f_A 10 ELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQG--------DLDKAL--LLTKKLLELDPEH 79 (104)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHCTTC
T ss_pred HHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHcc--------CHHHHH--HHHHHHHhcCCCC
Confidence 58999999999999999999999963 4678899999999 9999 778888 8888899999987
Q ss_pred CCC
Q psy3020 74 KPF 76 (150)
Q Consensus 74 ~~~ 76 (150)
...
T Consensus 80 ~~~ 82 (104)
T 2v5f_A 80 QRA 82 (104)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 208
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.04 E-value=1e-05 Score=57.71 Aligned_cols=88 Identities=11% Similarity=0.031 Sum_probs=72.0
Q ss_pred CCHHHHHHHHHHhhccCCC--cHHHHHHHHHH-Hhh-----hhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHH
Q psy3020 11 GRYKESISTYEEGLKLDPN--NEQMKEAIKDV-RNQ-----EMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSY 82 (150)
Q Consensus 11 ~~~~~A~~~~~~aL~~~p~--~~~a~~~l~~~-~~~-----g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~ 82 (150)
+..+.|...+++|+++||+ +..+|..+|.+ ... | +.++|. ..+.+++.++|+..
T Consensus 177 ~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gG--------d~ekA~--~~ferAL~LnP~~~-------- 238 (301)
T 3u64_A 177 DTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGG--------GMEKAH--TAFEHLTRYCSAHD-------- 238 (301)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTC--------CHHHHH--HHHHHHHHHCCTTC--------
T ss_pred HhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCC--------CHHHHH--HHHHHHHHhCCCCC--------
Confidence 3457899999999999999 67799999988 553 4 566777 78888999998521
Q ss_pred HHHHHHHhcCcchhhhHHHhHHHHHHHHHHHH-hcCHHHHHHHHHHHHhhcCCC
Q psy3020 83 VQMIKEIQKDPSLMTLEAKISLLKDKGNAALQ-ANNFKEAIEAYSEAIKLDGTN 135 (150)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~A~~~~~~al~~~p~~ 135 (150)
...+...|..+.. .|++++|.+.+++++..+|..
T Consensus 239 -------------------id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 239 -------------------PDHHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp -------------------SHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred -------------------chHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 4567778888876 599999999999999999985
No 209
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.01 E-value=7.2e-05 Score=46.77 Aligned_cols=103 Identities=5% Similarity=-0.046 Sum_probs=70.2
Q ss_pred hCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHHHHH
Q psy3020 10 LGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKE 88 (150)
Q Consensus 10 ~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 88 (150)
......+.+.|.+.+..++.+..+.+.+|-+ ....... +..+.+ .-+...++.+
T Consensus 14 ~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~-----d~~~GI--~lLe~l~~~~------------------ 68 (126)
T 1nzn_A 14 VEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYND-----DIRKGI--VLLEELLPKG------------------ 68 (126)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHH-----HHHHHH--HHHHHHTTTS------------------
T ss_pred HHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHH-----HHHHHH--HHHHHHHhcC------------------
Confidence 3445677888999988888888888888776 4444221 223333 2222222211
Q ss_pred HhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHH
Q psy3020 89 IQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAA 145 (150)
Q Consensus 89 l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~ 145 (150)
.|. .+-+.++.++..+++.|+|+.|.+++..+|+++|+|..+...+..+
T Consensus 69 ---~p~-----~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 69 ---SKE-----EQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLI 117 (126)
T ss_dssp ---CHH-----HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ---Ccc-----hHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 010 2267889999999999999999999999999999998876654443
No 210
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.99 E-value=1.7e-05 Score=59.78 Aligned_cols=113 Identities=11% Similarity=0.087 Sum_probs=83.2
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH---HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCC
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV---RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSD 79 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~---~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~ 79 (150)
+..+|.+.|++++|+..++++|.++|.+..+++.++.+ +..+ ++.+.+ ..+..++++.|
T Consensus 213 lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~p~--------k~~ehl--~~~~~~ini~k-------- 274 (449)
T 1b89_A 213 LINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQ--------KMREHL--ELFWSRVNIPK-------- 274 (449)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTCHH--------HHHHHH--HHHSTTSCHHH--------
T ss_pred HHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcCHH--------HHHHHH--HHHHHHhcCcH--------
Confidence 45789999999999999999999999999999999776 3444 444444 44444433332
Q ss_pred hHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhh------------cCCCcchhhcHHHHHH
Q psy3020 80 PSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKL------------DGTNHILFSNRSAAFA 147 (150)
Q Consensus 80 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------------~p~~~~~~~n~a~~~~ 147 (150)
+.+. - .++..|..+.-++..-++|+.|+...-+.... .+.|..+|+.....|+
T Consensus 275 --~~~~---~----------~~~~~w~e~~~ly~~~~e~d~A~~tm~~h~~~a~~~~~f~~~~~kv~n~elyYkai~fyl 339 (449)
T 1b89_A 275 --VLRA---A----------EQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYRAIQFYL 339 (449)
T ss_dssp --HHHH---H----------HTTTCHHHHHHHHHHTTCHHHHHHHHHHSTTTTCCHHHHHHHHHHCSSTHHHHHHHHHHH
T ss_pred --HHHH---H----------HHHHHHHHHHHHHHhhchHHHHHHHHHhCChhhhhhHHHHHHHhchhHHHHHHHHHHHHH
Confidence 1111 1 22678999999999999999999987777655 7888888886666665
Q ss_pred h
Q psy3020 148 K 148 (150)
Q Consensus 148 ~ 148 (150)
.
T Consensus 340 ~ 340 (449)
T 1b89_A 340 E 340 (449)
T ss_dssp H
T ss_pred h
Confidence 4
No 211
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.91 E-value=4.1e-05 Score=58.56 Aligned_cols=101 Identities=15% Similarity=0.035 Sum_probs=71.6
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhcc-----CCCcHH---HHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKL-----DPNNEQ---MKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPR 72 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~-----~p~~~~---a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~ 72 (150)
+||.+|..+|+|++|+..|+++|++ -|+++. .+..||.+ ..+| .+.+|. +.+.+++.+.-
T Consensus 356 nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G--------~~~eA~--~~~~~Al~i~~- 424 (490)
T 3n71_A 356 IASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAG--------HIEVGH--GMICKAYAILL- 424 (490)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHHH-
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCC--------CHHHHH--HHHHHHHHHHH-
Confidence 5899999999999999999999985 455554 56788888 8888 566666 55554442111
Q ss_pred CCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Q psy3020 73 TKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLD 132 (150)
Q Consensus 73 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 132 (150)
..+ +++.. .-......++..+..++.|.+|...|.++.+..
T Consensus 425 --------------~~l--G~~Hp---~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 425 --------------VTH--GPSHP---ITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp --------------HHT--CTTSH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------HHh--CCCCh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001 11110 005566788888899999999999999997744
No 212
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.80 E-value=9.6e-05 Score=52.71 Aligned_cols=47 Identities=9% Similarity=-0.024 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHHHh-----cCHHHHHHHHHHHHhhcCCC-cchhhcHHHHHHh
Q psy3020 102 ISLLKDKGNAALQA-----NNFKEAIEAYSEAIKLDGTN-HILFSNRSAAFAK 148 (150)
Q Consensus 102 ~~~~~~~g~~~~~~-----~~~~~A~~~~~~al~~~p~~-~~~~~n~a~~~~~ 148 (150)
..+|..+|..+.+. |+.+.|.++|++||+++|+. +..++..|..++.
T Consensus 199 GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~ 251 (301)
T 3u64_A 199 GAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCI 251 (301)
T ss_dssp HHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHH
Confidence 67999999999885 99999999999999999975 9999988887765
No 213
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.56 E-value=0.00065 Score=48.95 Aligned_cols=123 Identities=11% Similarity=0.021 Sum_probs=79.2
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCC-----cH-HHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCC--
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPN-----NE-QMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPR-- 72 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~-----~~-~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~-- 72 (150)
.++.++...|+++.|.+.+++..+.+|+ +. -....-+.+ ...|.. ++..++ ..+.+.....|+
T Consensus 141 l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~------~~q~A~--~~f~El~~~~p~~~ 212 (310)
T 3mv2_B 141 LAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKE------TATSNF--YYYEELSQTFPTWK 212 (310)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCS------TTTHHH--HHHHHHHTTSCSHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCc------cHHHHH--HHHHHHHHhCCCcc
Confidence 4678999999999999999999999994 22 233333444 333421 455566 555555555554
Q ss_pred CCC-C------CCC-hHHHHHHHHHhc-----------CcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q psy3020 73 TKP-F------LSD-PSYVQMIKEIQK-----------DPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDG 133 (150)
Q Consensus 73 ~~~-~------~~~-~~~~~~~~~l~~-----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p 133 (150)
... . ..+ +.....++.+.. +|.. +.++.++..+.+..|+ +|.+.++++.+.+|
T Consensus 213 ~~~lLln~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~------~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P 284 (310)
T 3mv2_B 213 TQLGLLNLHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYK------PTFLANQITLALMQGL--DTEDLTNQLVKLDH 284 (310)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSH------HHHHHHHHHHHHHTTC--TTHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHcCCHHHHHHHHHHHHHhcccccccccCCCCC------HHHHHHHHHHHHHhCh--HHHHHHHHHHHhCC
Confidence 111 0 111 112222322222 2433 8889899888888898 99999999999999
Q ss_pred CCcchhh
Q psy3020 134 TNHILFS 140 (150)
Q Consensus 134 ~~~~~~~ 140 (150)
++|...-
T Consensus 285 ~hp~i~d 291 (310)
T 3mv2_B 285 EHAFIKH 291 (310)
T ss_dssp CCHHHHH
T ss_pred CChHHHH
Confidence 9987643
No 214
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.50 E-value=0.00014 Score=46.98 Aligned_cols=43 Identities=19% Similarity=0.186 Sum_probs=37.3
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-Hhhh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQE 44 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g 44 (150)
.+|.+++++|+|++|++.++++|+++|+|..+......+ ..+.
T Consensus 76 ~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~~ 119 (152)
T 1pc2_A 76 YLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMK 119 (152)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 588999999999999999999999999999998777666 4443
No 215
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.10 E-value=0.00078 Score=42.05 Aligned_cols=39 Identities=21% Similarity=0.183 Sum_probs=34.3
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV 40 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~ 40 (150)
.||..++++|+|++|++.++..|+++|+|..+..-...+
T Consensus 79 ~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 79 YLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLI 117 (126)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 578999999999999999999999999999986555444
No 216
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.04 E-value=0.00067 Score=51.11 Aligned_cols=56 Identities=11% Similarity=0.013 Sum_probs=43.8
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhcc--------CCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKL--------DPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQL 67 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~--------~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l 67 (150)
+||.+|..+|+|++|+..|+++|++ +|+-...+..||.+ ..+| ++.+|. +.+.+++
T Consensus 345 nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg--------~~~eA~--~~~~~Al 409 (433)
T 3qww_A 345 QAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLE--------NKAAGE--KALKKAI 409 (433)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHH
T ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhcc--------CHHHHH--HHHHHHH
Confidence 5899999999999999999999975 44444567788988 8999 556666 5555554
No 217
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.86 E-value=0.0029 Score=39.76 Aligned_cols=39 Identities=18% Similarity=0.078 Sum_probs=34.4
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV 40 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~ 40 (150)
-+|..+.++|+|++|++..+.+|+++|+|..|..-...+
T Consensus 83 yLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~I 121 (134)
T 3o48_A 83 YLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 121 (134)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Confidence 478899999999999999999999999999987655555
No 218
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=96.83 E-value=0.0031 Score=46.47 Aligned_cols=61 Identities=13% Similarity=0.092 Sum_probs=51.7
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCC
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTK 74 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~ 74 (150)
+|..+...|++++|+..+++|+.++|+ ..++..+|.+ ...| ...+|. ..+.+++.++|...
T Consensus 283 lal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G--------~~~eA~--e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 283 KAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKG--------MNREAA--DAYLTAFNLRPGAN 344 (372)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHHSCSHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCC--------CHHHHH--HHHHHHHhcCCCcC
Confidence 455667789999999999999999985 6777888999 8889 667888 88999999999753
No 219
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.82 E-value=0.026 Score=35.86 Aligned_cols=43 Identities=9% Similarity=-0.031 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHH
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSA 144 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~ 144 (150)
-+.++.++..+++.|+|++|.++...+|+++|+|..+......
T Consensus 77 RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~ 119 (144)
T 1y8m_A 77 RECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 119 (144)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 6778899999999999999999999999999999877554433
No 220
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.67 E-value=0.0043 Score=39.47 Aligned_cols=39 Identities=18% Similarity=0.078 Sum_probs=34.1
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV 40 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~ 40 (150)
-||..++++|+|++|+++.+..|+++|+|..+..-...+
T Consensus 82 yLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~I 120 (144)
T 1y8m_A 82 YLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 120 (144)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 478899999999999999999999999999886555444
No 221
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.54 E-value=0.04 Score=34.60 Aligned_cols=43 Identities=9% Similarity=-0.031 Sum_probs=38.0
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHH
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSA 144 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~ 144 (150)
-+.++.++..+++.|+|+.|.++...+|++.|+|..+......
T Consensus 78 Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 78 RECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 6788999999999999999999999999999999877654443
No 222
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.39 E-value=0.024 Score=45.06 Aligned_cols=116 Identities=8% Similarity=-0.032 Sum_probs=67.8
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhcc-----------CCC-----------cHHHHHHHHHH-HhhhhccCCCCCchhhhhC
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKL-----------DPN-----------NEQMKEAIKDV-RNQEMNDMNRGDPFANLFS 59 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~-----------~p~-----------~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~ 59 (150)
.+......|++++|.+.|+++++. .|. +..+|...+.+ ...| .+..|-
T Consensus 384 ~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~--------~l~~AR- 454 (679)
T 4e6h_A 384 LSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQ--------GLAASR- 454 (679)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHH--------CHHHHH-
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcC--------CHHHHH-
Confidence 355667789999999999999985 253 45578888887 6666 333333
Q ss_pred ChHHHHhhccCCCC-CC-C----------CCCh-HHHHHH-HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHH
Q psy3020 60 DPNIFVQLQLDPRT-KP-F----------LSDP-SYVQMI-KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAY 125 (150)
Q Consensus 60 ~~~~~~~l~~~~~~-~~-~----------~~~~-~~~~~~-~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~ 125 (150)
.-+.+++...|.. .. + ..+. ...... ..+..-|.. +..|...+......|+.+.|-..|
T Consensus 455 -~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~------~~~w~~y~~fe~~~~~~~~AR~lf 527 (679)
T 4e6h_A 455 -KIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATD------GEYINKYLDFLIYVNEESQVKSLF 527 (679)
T ss_dssp -HHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTC------HHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred -HHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCc------hHHHHHHHHHHHhCCCHHHHHHHH
Confidence 3333343321211 11 0 0000 000010 011111211 566677777777889999999999
Q ss_pred HHHHhhcCC
Q psy3020 126 SEAIKLDGT 134 (150)
Q Consensus 126 ~~al~~~p~ 134 (150)
++|+...|+
T Consensus 528 eral~~~~~ 536 (679)
T 4e6h_A 528 ESSIDKISD 536 (679)
T ss_dssp HHHTTTSSS
T ss_pred HHHHHhcCC
Confidence 999998884
No 223
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.16 E-value=0.071 Score=42.42 Aligned_cols=41 Identities=10% Similarity=0.026 Sum_probs=27.6
Q ss_pred hHHHHhhCCHHHHH-HHHHHhhccCCCcHHHHHHHHHH-Hhhh
Q psy3020 4 YSCLSYLGRYKESI-STYEEGLKLDPNNEQMKEAIKDV-RNQE 44 (150)
Q Consensus 4 g~~~~~~~~~~~A~-~~~~~aL~~~p~~~~a~~~l~~~-~~~g 44 (150)
+..+...|+.++|+ +.|++|+...|.+...+...+.+ ...|
T Consensus 350 a~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~ 392 (679)
T 4e6h_A 350 ANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNT 392 (679)
T ss_dssp HHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhC
Confidence 33445556666775 77777777777777777777777 6666
No 224
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=96.12 E-value=0.0082 Score=45.09 Aligned_cols=56 Identities=11% Similarity=0.096 Sum_probs=42.9
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhcc-----CCCcHH---HHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKL-----DPNNEQ---MKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQL 67 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~-----~p~~~~---a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l 67 (150)
++|.+|..+|+|++|+..|+++|.+ -|+++. .+..||.+ ..+| ++.+|. ..+.+++
T Consensus 334 ~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g--------~~~eA~--~~~~~Al 398 (429)
T 3qwp_A 334 CAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQG--------MFPQAM--KNLRLAF 398 (429)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHH
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcC--------CHHHHH--HHHHHHH
Confidence 5899999999999999999999974 355554 56788888 8888 556666 5554444
No 225
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=95.85 E-value=0.23 Score=34.94 Aligned_cols=122 Identities=11% Similarity=0.176 Sum_probs=85.6
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChH
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPS 81 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~ 81 (150)
....+.+.|.+++|++.....++.+|.|+.....+.++ --.| +..+|. ..+.....++|+...... .
T Consensus 3 ~~~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G--------~w~RA~--~QL~~~a~l~p~~~~~a~--~ 70 (273)
T 1zbp_A 3 QWKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDG--------DFERAD--EQLMQSIKLFPEYLPGAS--Q 70 (273)
T ss_dssp CHHHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHHHCGGGHHHHH--H
T ss_pred cHHHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcC--------CHHHHH--HHHHHHHHhCchhhHHHH--H
Confidence 34567889999999999999999999999999999888 7888 567777 778778888887654210 1
Q ss_pred HHHHHHH------Hh---cCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCc
Q psy3020 82 YVQMIKE------IQ---KDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNH 136 (150)
Q Consensus 82 ~~~~~~~------l~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~ 136 (150)
|...|.. +- ..|.....+.........+......|+.++|.+.-.+|++.-|..+
T Consensus 71 yr~lI~aE~~R~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ap~~~ 134 (273)
T 1zbp_A 71 LRHLVKAAQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKG 134 (273)
T ss_dssp HHHHHHHHHHHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcCcccC
Confidence 1222111 00 1122222223344445556666788999999999999999988654
No 226
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.39 E-value=0.12 Score=41.68 Aligned_cols=48 Identities=17% Similarity=0.143 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhcC
Q psy3020 103 SLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKAI 150 (150)
Q Consensus 103 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~~ 150 (150)
..+..-+..+..+|+|+-|+++-.+|+..-|.+-..|+.++.||+.+.
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~ 385 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKE 385 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhc
Confidence 345556777788999999999999999999999999999999999863
No 227
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=94.62 E-value=0.19 Score=32.72 Aligned_cols=50 Identities=12% Similarity=0.234 Sum_probs=40.5
Q ss_pred HHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC---CC----------------------cchhhcHHHHHHhc
Q psy3020 100 AKISLLKDKGNAALQANNFKEAIEAYSEAIKLDG---TN----------------------HILFSNRSAAFAKA 149 (150)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p---~~----------------------~~~~~n~a~~~~~~ 149 (150)
.++..+..+|+.++..++|..|...|++||++.. .+ ..+.|.+|.||+++
T Consensus 61 ~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l 135 (167)
T 3ffl_A 61 QKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVL 135 (167)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHH
Confidence 4588999999999999999999999999876432 11 14778899999876
No 228
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=93.60 E-value=0.18 Score=32.49 Aligned_cols=70 Identities=3% Similarity=-0.075 Sum_probs=53.5
Q ss_pred HHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCCCChHHHHH
Q psy3020 7 LSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQM 85 (150)
Q Consensus 7 ~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 85 (150)
+...++.++|.+.|+.+++++..++-+|.+.|.. ...| .+.+|- .-+.+++.+.|...+ .+..+
T Consensus 70 ~~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqg--------nl~kAR--kILg~AiG~~~k~~~-----~le~a 134 (161)
T 4h7y_A 70 LKAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQG--------NVKKSK--QLLQKAVERGAVPLE-----MLEIA 134 (161)
T ss_dssp HHHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHTTCBCHH-----HHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcc--------cHHHHH--HHHHHHhccCCCcHH-----HHHHH
Confidence 4566899999999999999999999999999999 7778 666776 777778888876544 23444
Q ss_pred HHHHhc
Q psy3020 86 IKEIQK 91 (150)
Q Consensus 86 ~~~l~~ 91 (150)
++.+..
T Consensus 135 ~~nl~~ 140 (161)
T 4h7y_A 135 LRNLNL 140 (161)
T ss_dssp HHHHHT
T ss_pred HHhhhc
Confidence 455443
No 229
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=92.98 E-value=0.33 Score=31.58 Aligned_cols=43 Identities=14% Similarity=0.182 Sum_probs=33.8
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCC-------------------------CcHHHHHHHHHH-Hhhh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDP-------------------------NNEQMKEAIKDV-RNQE 44 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p-------------------------~~~~a~~~l~~~-~~~g 44 (150)
.+|.+++..++|..|...|++||++.. ...+..+.++.| ..++
T Consensus 68 ~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~ 136 (167)
T 3ffl_A 68 YHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLK 136 (167)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHC
Confidence 579999999999999999999876322 123677778888 7777
No 230
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=92.36 E-value=0.96 Score=33.61 Aligned_cols=101 Identities=12% Similarity=0.027 Sum_probs=57.2
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccC--CCcH----HHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLD--PNNE----QMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTK 74 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~--p~~~----~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~ 74 (150)
.+|..|+..|+|.+|++.+.+.++-- .++. +++..-..+ ..+++.. ..+.++ ....+...
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~-----k~k~~l--~~a~~~~~------ 170 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLP-----KARAAL--TSARTTAN------ 170 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHH-----HHHHHH--HHHHHHHH------
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHH-----HHHHHH--HHHHhhhc------
Confidence 47899999999999999998888721 1222 233333444 4555322 222222 11111100
Q ss_pred CCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHH-HhcCHHHHHHHHHHHHhhcC
Q psy3020 75 PFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAAL-QANNFKEAIEAYSEAIKLDG 133 (150)
Q Consensus 75 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~p 133 (150)
.+..+|. ..+.....-|..++ ..++|..|..+|-++.+-..
T Consensus 171 -------------ai~~~p~-----i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~ 212 (394)
T 3txn_A 171 -------------AIYCPPK-----VQGALDLQSGILHAADERDFKTAFSYFYEAFEGFD 212 (394)
T ss_dssp -------------HSCCCHH-----HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHT
T ss_pred -------------cCCCCHH-----HHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhccc
Confidence 0001110 11444455677788 89999999999999975443
No 231
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=92.33 E-value=0.24 Score=27.62 Aligned_cols=37 Identities=11% Similarity=0.199 Sum_probs=32.4
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHH
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIK 38 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~ 38 (150)
.+|..+...|++++|+.+|-+||.+-|+-......+-
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~q 58 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQ 58 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 5799999999999999999999999999887765553
No 232
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=91.99 E-value=3.2 Score=31.61 Aligned_cols=33 Identities=6% Similarity=-0.022 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHh--hcCC
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIK--LDGT 134 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~--~~p~ 134 (150)
...|..+-..+.+.|+.++|.+.+.+.-+ ..|+
T Consensus 175 ~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps 209 (501)
T 4g26_A 175 EPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVS 209 (501)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBC
T ss_pred HHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcC
Confidence 56788888999999999999999999865 4554
No 233
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=91.90 E-value=1.7 Score=28.48 Aligned_cols=35 Identities=11% Similarity=0.015 Sum_probs=28.6
Q ss_pred HHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-Hhhhhc
Q psy3020 7 LSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMN 46 (150)
Q Consensus 7 ~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~ 46 (150)
-.+.|+++.|.+..+.. ++...|..+|.. ...|+.
T Consensus 15 AL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~ 50 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNA 50 (177)
T ss_dssp HHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCH
T ss_pred HHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCCh
Confidence 45789999999987765 678899999999 777744
No 234
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=91.64 E-value=3.5 Score=31.39 Aligned_cols=45 Identities=4% Similarity=-0.128 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhh--cCCCcchhhcHHHHHH
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKL--DGTNHILFSNRSAAFA 147 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~n~a~~~~ 147 (150)
...|..+-..+.+.|+.++|.+.|.+..+. .| +...|..+-.+|.
T Consensus 140 ~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~P-d~~ty~~Li~~~~ 186 (501)
T 4g26_A 140 LRSYGPALFGFCRKGDADKAYEVDAHMVESEVVP-EEPELAALLKVSM 186 (501)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHH
T ss_pred cceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCC-CHHHHHHHHHHHh
Confidence 567778888888899999999999888764 44 3334444444444
No 235
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=91.59 E-value=0.45 Score=36.49 Aligned_cols=46 Identities=20% Similarity=0.143 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 103 SLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 103 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
..+..+|.+...+..+..|..+|.+|+.++|++-..|+.+|.+...
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~ 198 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS 198 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhc
Confidence 4667899999999999999999999999999999999999988754
No 236
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=91.58 E-value=3.2 Score=31.46 Aligned_cols=51 Identities=4% Similarity=-0.249 Sum_probs=40.8
Q ss_pred HHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCC
Q psy3020 13 YKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTK 74 (150)
Q Consensus 13 ~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~ 74 (150)
.+.....|+++|...|..+..|...+.. ...| +...+. .-+.+++.. |...
T Consensus 195 ~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~--------~~~~ar--~i~erAi~~-P~~~ 246 (493)
T 2uy1_A 195 ESRMHFIHNYILDSFYYAEEVYFFYSEYLIGIG--------QKEKAK--KVVERGIEM-SDGM 246 (493)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHHH-CCSS
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcC--------CHHHHH--HHHHHHHhC-CCcH
Confidence 3456789999999999999999999998 7777 556666 677777777 7754
No 237
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=91.40 E-value=1.9 Score=32.79 Aligned_cols=42 Identities=7% Similarity=-0.047 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHH
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSA 144 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~ 144 (150)
+..|...+..+...|+.++|...|++|+.. |.+..+|+..+.
T Consensus 213 ~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~ 254 (493)
T 2uy1_A 213 EEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGL 254 (493)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHh
Confidence 788999999999999999999999999999 999877765443
No 238
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=90.90 E-value=0.51 Score=26.28 Aligned_cols=33 Identities=15% Similarity=0.296 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCC
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKLDGT 134 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 134 (150)
+..-..+|..+...|++++|+.+|.+|+..-|+
T Consensus 17 Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 17 FLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 555577999999999999999999999999985
No 239
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=90.75 E-value=0.52 Score=36.12 Aligned_cols=42 Identities=17% Similarity=0.173 Sum_probs=37.4
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-Hhhh
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQE 44 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g 44 (150)
||........++.|...|.+|+.+.|++...++.||.+ ...|
T Consensus 158 LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~ 200 (497)
T 1ya0_A 158 LGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKG 200 (497)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhccc
Confidence 67777777888999999999999999999999999998 6655
No 240
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=89.79 E-value=3.6 Score=30.69 Aligned_cols=101 Identities=11% Similarity=0.025 Sum_probs=59.9
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCC---cHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhhccCCCCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPN---NEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQLQLDPRTKPFL 77 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~---~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~ 77 (150)
.+|.-|...|++++|+++|.++.....+ -.+.+..+..+ ...+++ ..+. ..+.++
T Consensus 136 ~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~--------~~~~--~~~~ka----------- 194 (429)
T 4b4t_R 136 NLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQ--------LYVK--EKLEAV----------- 194 (429)
T ss_dssp HHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCH--------HHHH--HHHHHH-----------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccH--------HHHH--HHHHHH-----------
Confidence 4788999999999999999998874433 33556666666 555533 2222 122111
Q ss_pred CChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCC
Q psy3020 78 SDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGT 134 (150)
Q Consensus 78 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 134 (150)
..+........ .+.......|..++..++|.+|-..|-+++.....
T Consensus 195 ---------~~~~~~~~d~~--~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~~~ 240 (429)
T 4b4t_R 195 ---------NSMIEKGGDWE--RRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATFTS 240 (429)
T ss_dssp ---------HHHHTTCCCTH--HHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHHSCC
T ss_pred ---------HHhhhcCCCHH--HHHHHHHHHHHHHHHhChHHHHHHHHHHHhccCCc
Confidence 11111100000 11223334566777899999999999998775443
No 241
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=89.54 E-value=0.41 Score=35.29 Aligned_cols=44 Identities=14% Similarity=0.021 Sum_probs=39.4
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-Hhhhhc
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMN 46 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~ 46 (150)
++.++...|++.+|+..+.+++..+|-+..+|..+..+ ...|+.
T Consensus 177 ~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~ 221 (388)
T 2ff4_A 177 KAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQ 221 (388)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Confidence 46678899999999999999999999999999998888 888844
No 242
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=88.58 E-value=0.83 Score=26.59 Aligned_cols=29 Identities=21% Similarity=0.281 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIK 130 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 130 (150)
+-.+.-++..+.+.|+|++||++..+|..
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa~ 43 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKATT 43 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 34455678888999999999998888764
No 243
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=88.26 E-value=0.43 Score=28.01 Aligned_cols=38 Identities=11% Similarity=0.202 Sum_probs=32.4
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHH
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKD 39 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~ 39 (150)
.+|..+...|+++.|+.+|-+||.+-|.-......+-.
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i~q~ 62 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQ 62 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHh
Confidence 57999999999999999999999999997776655533
No 244
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=87.91 E-value=1.9 Score=28.81 Aligned_cols=38 Identities=21% Similarity=0.146 Sum_probs=33.4
Q ss_pred HhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcch
Q psy3020 101 KISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHIL 138 (150)
Q Consensus 101 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 138 (150)
.+.-.+.+|..++..++|.+|.+++.+|+..-|.+...
T Consensus 13 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~ 50 (203)
T 3t5x_A 13 RVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQK 50 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHH
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHH
Confidence 37778899999999999999999999999998876543
No 245
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=87.54 E-value=1.6 Score=25.03 Aligned_cols=30 Identities=17% Similarity=0.301 Sum_probs=20.9
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKL 131 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 131 (150)
+..+...+.-.=..|+|++|+.+|..+++.
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 344445555556789999888888888764
No 246
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=87.36 E-value=0.96 Score=26.53 Aligned_cols=33 Identities=15% Similarity=0.296 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCC
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKLDGT 134 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 134 (150)
+..-..+|..+...|+++.|+.+|.+|+.+-|+
T Consensus 20 Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 20 FLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 555677999999999999999999999999885
No 247
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=86.97 E-value=1.3 Score=35.73 Aligned_cols=40 Identities=13% Similarity=0.093 Sum_probs=36.8
Q ss_pred HHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-Hhhhhc
Q psy3020 7 LSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMN 46 (150)
Q Consensus 7 ~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~ 46 (150)
+...|+|+-|+.+-++|...-|+.+..|..|+.+ ..+|++
T Consensus 347 Ll~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~ 387 (754)
T 4gns_B 347 LLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEY 387 (754)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCH
T ss_pred HhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccH
Confidence 4567999999999999999999999999999999 999933
No 248
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=86.79 E-value=4.5 Score=30.34 Aligned_cols=96 Identities=9% Similarity=-0.056 Sum_probs=56.2
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhc----cCCCc--HHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHh---hccCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLK----LDPNN--EQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQ---LQLDP 71 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~----~~p~~--~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~---l~~~~ 71 (150)
.|+..|...|++.+|...+..... .++.. .+.+.....+ ...+ ++.++. ..+.+. ....+
T Consensus 142 ~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~--------d~~~a~--~~~~ki~~~~~~~~ 211 (445)
T 4b4t_P 142 DLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKG--------DYSQAT--VLSRKILKKTFKNP 211 (445)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHHHHHHSS
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCC--------CHHHHH--HHHHHHHHhhcccC
Confidence 378899999999999999888653 22211 1233333444 4444 333332 111110 11111
Q ss_pred CCCCCCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Q psy3020 72 RTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKL 131 (150)
Q Consensus 72 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 131 (150)
. .| . -+...+...|..+...++|.+|.++|.++.+.
T Consensus 212 ~-------------------~~-~----lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 212 K-------------------YE-S----LKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp C-------------------CH-H----HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred C-------------------cH-H----HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 0 00 0 12455667788888999999999999999864
No 249
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=86.25 E-value=2 Score=24.41 Aligned_cols=30 Identities=27% Similarity=0.252 Sum_probs=21.7
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKL 131 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 131 (150)
+..+...+...=+.|+|++|+.+|.++++.
T Consensus 19 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 19 ARKYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 455556666666788988888888877763
No 250
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=84.41 E-value=2.7 Score=23.79 Aligned_cols=30 Identities=20% Similarity=0.182 Sum_probs=20.7
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKL 131 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 131 (150)
+..+...+.-.=+.|+|++|+.+|.++++.
T Consensus 11 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 11 ARKYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 444555565556788888888888777763
No 251
>2llv_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=83.75 E-value=0.2 Score=27.77 Aligned_cols=42 Identities=29% Similarity=0.623 Sum_probs=34.2
Q ss_pred hhCChHHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhh
Q psy3020 57 LFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTL 98 (150)
Q Consensus 57 a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 98 (150)
.|.++++...+..+|+...++.++.+..+++.+..+|..+..
T Consensus 9 ~f~~p~~~~kl~~dP~t~~~~~DP~~~~~lq~i~~NP~~i~~ 50 (71)
T 2llv_A 9 LFADPNLIENLKKNPKTSEMMKDPQLVAKLIGYKQNPQAIGQ 50 (71)
T ss_dssp HHHSSSCHHHHHHSSTTHHHHHSCTHHHHHHHHHHSCTTHHH
T ss_pred hccChHHHHHHHcChHHHHHhcCHHHHHHHHHHHHCHHHHHH
Confidence 443456667888899999999999999999999999988544
No 252
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=82.36 E-value=0.72 Score=26.01 Aligned_cols=24 Identities=21% Similarity=0.342 Sum_probs=21.3
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhc
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLK 25 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~ 25 (150)
.+|+-|.-+|+|+.|+.+|+.+++
T Consensus 17 k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 17 KLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcChHHHHHHHHHHHH
Confidence 478889999999999999999884
No 253
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=81.90 E-value=3.4 Score=30.33 Aligned_cols=48 Identities=10% Similarity=0.061 Sum_probs=40.7
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
..+...+...+...|++.+|+..+.+++..+|-+..+|..+-.+|...
T Consensus 171 ~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~ 218 (388)
T 2ff4_A 171 VLAHTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLS 218 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 455566777888999999999999999999999999988887777654
No 254
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=81.61 E-value=4 Score=23.07 Aligned_cols=30 Identities=23% Similarity=0.197 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKL 131 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 131 (150)
+..+...+.-.=..|+|++|+..|..+++.
T Consensus 13 A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 13 GIELVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 444455555555779999998888888773
No 255
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=81.36 E-value=1.5 Score=25.49 Aligned_cols=21 Identities=29% Similarity=0.349 Sum_probs=17.5
Q ss_pred hHHHHhhCCHHHHHHHHHHhh
Q psy3020 4 YSCLSYLGRYKESISTYEEGL 24 (150)
Q Consensus 4 g~~~~~~~~~~~A~~~~~~aL 24 (150)
+..+...|+|++||++.++|.
T Consensus 22 Ae~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 22 ADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHHHHH
Confidence 567888999999999887765
No 256
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=80.85 E-value=8.9 Score=24.65 Aligned_cols=46 Identities=9% Similarity=-0.018 Sum_probs=36.7
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHh
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~ 148 (150)
+..|...+....++|+...|.+.+.+|+.+.|... -....|+.-++
T Consensus 94 AKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~-~~le~a~~nl~ 139 (161)
T 4h7y_A 94 AFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPL-EMLEIALRNLN 139 (161)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcH-HHHHHHHHhhh
Confidence 67888889999999999999999999999999643 33445554443
No 257
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=80.22 E-value=4.6 Score=23.35 Aligned_cols=30 Identities=13% Similarity=0.285 Sum_probs=20.3
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKL 131 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 131 (150)
+..+...+.-.=..|+|++|+.+|..+++.
T Consensus 15 Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 15 AVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 444555555556778888888888777763
No 258
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=79.73 E-value=4.4 Score=24.60 Aligned_cols=30 Identities=27% Similarity=0.399 Sum_probs=20.5
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKL 131 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 131 (150)
+..+...+.-.=..|+|++|+.+|..++++
T Consensus 18 Ai~lv~~Ave~D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 18 AIDLASKAAQEDKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 344445555555778888888888888773
No 259
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=79.22 E-value=1.8 Score=24.64 Aligned_cols=21 Identities=19% Similarity=0.295 Sum_probs=13.7
Q ss_pred hHHHHhhCCHHHHHHHHHHhh
Q psy3020 4 YSCLSYLGRYKESISTYEEGL 24 (150)
Q Consensus 4 g~~~~~~~~~~~A~~~~~~aL 24 (150)
|.-.-+.|+|++|+..|..++
T Consensus 26 Ave~D~~g~y~eAl~lY~~ai 46 (83)
T 2w2u_A 26 AVKADKEGNAEEAITNYKKAI 46 (83)
T ss_dssp HHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHH
Confidence 344556677777777777666
No 260
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=78.09 E-value=11 Score=29.68 Aligned_cols=34 Identities=15% Similarity=0.036 Sum_probs=22.5
Q ss_pred HhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-Hhhhhc
Q psy3020 8 SYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMN 46 (150)
Q Consensus 8 ~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~ 46 (150)
...|++++|.+..+ ..++...|..+|.. ...++.
T Consensus 663 l~~~~~~~A~~~~~-----~~~~~~~W~~la~~al~~~~~ 697 (814)
T 3mkq_A 663 LKVGQLTLARDLLT-----DESAEMKWRALGDASLQRFNF 697 (814)
T ss_dssp HHHTCHHHHHHHHT-----TCCCHHHHHHHHHHHHHTTCH
T ss_pred hhcCCHHHHHHHHH-----hhCcHhHHHHHHHHHHHcCCH
Confidence 45566666666543 33567888899988 777744
No 261
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=77.86 E-value=2 Score=24.32 Aligned_cols=21 Identities=14% Similarity=0.298 Sum_probs=13.6
Q ss_pred hHHHHhhCCHHHHHHHHHHhh
Q psy3020 4 YSCLSYLGRYKESISTYEEGL 24 (150)
Q Consensus 4 g~~~~~~~~~~~A~~~~~~aL 24 (150)
|.-.-+.|+|++|+..|..+|
T Consensus 18 Ave~D~~g~y~eAl~lY~~ai 38 (83)
T 2v6y_A 18 AVKADKEGKVEDAITYYKKAI 38 (83)
T ss_dssp HHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHH
Confidence 344556677777777776666
No 262
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=77.51 E-value=4.9 Score=23.24 Aligned_cols=49 Identities=18% Similarity=0.219 Sum_probs=35.5
Q ss_pred HHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC--CCcchh-hcHHHHHHh
Q psy3020 100 AKISLLKDKGNAALQANNFKEAIEAYSEAIKLDG--TNHILF-SNRSAAFAK 148 (150)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p--~~~~~~-~n~a~~~~~ 148 (150)
.++..+...|.-+++.++|.+|.-.|+++..+.. +--..+ +.++.|--+
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten~~i~ki~~fyl~ec~kk 102 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLSDNEEIKKIASFYLEECRKK 102 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHccccCHHHHHHHHHHHHHHHHH
Confidence 4477788889999999999999999999975443 322233 556666543
No 263
>2lnm_A Protein TIC 40, chloroplastic; translocon, import, TIC40-NP, protein transport; NMR {Arabidopsis thaliana}
Probab=76.78 E-value=1.2 Score=23.80 Aligned_cols=37 Identities=11% Similarity=0.251 Sum_probs=28.9
Q ss_pred HHHHhhccCCCCCCCCCChHHHHHHHHHhcCcchhhh
Q psy3020 62 NIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTL 98 (150)
Q Consensus 62 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 98 (150)
+...++..||+...+++++.+...++.+..+|..+.+
T Consensus 3 e~~~kl~~dPe~~~~m~dP~~~~~lq~i~~NP~~~~~ 39 (62)
T 2lnm_A 3 EVISKIMENPDVAMAFQNPRVQAALMECSENPMNIMK 39 (62)
T ss_dssp HHHHHHTTSHHHHHHTTSHHHHHHHHHHTTCGGGHHH
T ss_pred HHHHHHHcChHHHHHcCCHHHHHHHHHHHHCHHHHHH
Confidence 3445666778777788888999999999999987544
No 264
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=75.44 E-value=2.3 Score=24.33 Aligned_cols=22 Identities=27% Similarity=0.501 Sum_probs=15.3
Q ss_pred hHHHHhhCCHHHHHHHHHHhhc
Q psy3020 4 YSCLSYLGRYKESISTYEEGLK 25 (150)
Q Consensus 4 g~~~~~~~~~~~A~~~~~~aL~ 25 (150)
|.-.-..|+|++|+..|..+++
T Consensus 23 Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 23 AVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHH
Confidence 3344567888888888877764
No 265
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=74.11 E-value=16 Score=24.17 Aligned_cols=105 Identities=15% Similarity=0.108 Sum_probs=63.0
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-HhhhhccCCCCCchhhhhCChHHHHhh----ccCCCCCCC
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFSDPNIFVQL----QLDPRTKPF 76 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~~~~~~~~~~~a~~~~~~~~~l----~~~~~~~~~ 76 (150)
.++..++-.|.|..|+-++.. -+-..+..--+.| .... +++.|+ ..+...+ .-+|+..
T Consensus 38 L~~I~LyyngEY~R~Lf~L~~-----lNT~Ts~YYk~LCy~klK--------dYkkA~--~~le~il~~kvd~d~~~d-- 100 (242)
T 3kae_A 38 LMSIVLYLNGEYTRALFHLHK-----LNTCTSKYYESLCYKKKK--------DYKKAI--KSLESILEGKVERDPDVD-- 100 (242)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT-----CCBHHHHHHHHHHHHHTT--------CHHHHH--HHHHHHHTTCSBCCCCCC--
T ss_pred hhhhhhhhcchHhHHHHHHHh-----cchHHHHHHHHHHHHHHH--------HHHHHH--HHHHHHHhcccccCcccc--
Confidence 467777788888888776543 2344555555566 6666 666666 4444444 2333321
Q ss_pred CCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCC
Q psy3020 77 LSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTN 135 (150)
Q Consensus 77 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~ 135 (150)
..+...--+|.+ +.--+..+|.++.+.|+-+|||.+|.......|--
T Consensus 101 -------~~~~~ffvd~~D-----kEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf 147 (242)
T 3kae_A 101 -------ARIQEMFVDPGD-----EEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLF 147 (242)
T ss_dssp -------HHHHTTSCCTTC-----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred -------cccceeeeccch-----HHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCcccc
Confidence 111111122322 12234557888999999999999999988887743
No 266
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=73.76 E-value=22 Score=27.99 Aligned_cols=23 Identities=9% Similarity=-0.009 Sum_probs=20.3
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhh
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGL 24 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL 24 (150)
.+|..+.+.++++.|.++|.++=
T Consensus 686 ~la~~al~~~~~~~A~~~y~~~~ 708 (814)
T 3mkq_A 686 ALGDASLQRFNFKLAIEAFTNAH 708 (814)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHHcc
Confidence 47889999999999999999863
No 267
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=73.17 E-value=4.9 Score=31.01 Aligned_cols=41 Identities=12% Similarity=-0.049 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcH
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNR 142 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~ 142 (150)
...++.+|.+..-+++|.+|.+++..|+..-|.+....-++
T Consensus 270 ~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~~a~gfr 310 (523)
T 4b4t_S 270 ARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSKSLGFL 310 (523)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSSSCSHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcchhhhhHH
Confidence 67778899999999999999999999999998776544333
No 268
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=72.93 E-value=5.7 Score=31.48 Aligned_cols=44 Identities=14% Similarity=0.160 Sum_probs=38.9
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-Hhhhhc
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMN 46 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~ 46 (150)
.|...+..|+|.-|.+..+.++..+|+|.++..-++++ .++|..
T Consensus 455 ~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 455 QARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 35667788999999999999999999999999999998 888743
No 269
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=72.86 E-value=21 Score=25.78 Aligned_cols=35 Identities=17% Similarity=0.125 Sum_probs=28.9
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCc
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNH 136 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~ 136 (150)
..++..--...++.++|.-|-..-++.|++.|...
T Consensus 207 ~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~ 241 (325)
T 3mv2_A 207 TNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGP 241 (325)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHH
Confidence 55666666777899999999999999999999643
No 270
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=71.87 E-value=4.1 Score=22.88 Aligned_cols=27 Identities=11% Similarity=0.102 Sum_probs=22.5
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhh
Q psy3020 105 LKDKGNAALQANNFKEAIEAYSEAIKL 131 (150)
Q Consensus 105 ~~~~g~~~~~~~~~~~A~~~~~~al~~ 131 (150)
...+|+-+...|+|+.|+.+|+.+++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 455677788899999999999999873
No 271
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=71.00 E-value=9.2 Score=30.31 Aligned_cols=48 Identities=10% Similarity=0.145 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
.......+...+..|+|.-|.+..+.++..+|+|..+..-++.+|-++
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l 496 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQL 496 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 455667788889999999999999999999999999999999888765
No 272
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=70.81 E-value=5.3 Score=26.16 Aligned_cols=28 Identities=18% Similarity=-0.033 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAI 129 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al 129 (150)
...|..+|......|+++-|.+||.++=
T Consensus 34 ~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 34 SITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 6789999999999999999999998863
No 273
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=69.42 E-value=3.8 Score=23.75 Aligned_cols=21 Identities=29% Similarity=0.545 Sum_probs=12.8
Q ss_pred hHHHHhhCCHHHHHHHHHHhh
Q psy3020 4 YSCLSYLGRYKESISTYEEGL 24 (150)
Q Consensus 4 g~~~~~~~~~~~A~~~~~~aL 24 (150)
|.-.-..|+|++|+..|..++
T Consensus 22 Ave~D~~g~y~eAl~~Y~~Ai 42 (93)
T 1wfd_A 22 AVELDAESRYQQALVCYQEGI 42 (93)
T ss_dssp HHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHH
Confidence 344556677777666666555
No 274
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=66.26 E-value=26 Score=23.26 Aligned_cols=28 Identities=4% Similarity=0.013 Sum_probs=24.2
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhhcCC
Q psy3020 107 DKGNAALQANNFKEAIEAYSEAIKLDGT 134 (150)
Q Consensus 107 ~~g~~~~~~~~~~~A~~~~~~al~~~p~ 134 (150)
..+..++..|-.++.-.+|...-..||.
T Consensus 213 ~aa~~yf~lg~~d~s~~lf~~lR~kDP~ 240 (242)
T 3kae_A 213 NAARRYFNLGMNDKSKACFELVRRKDPM 240 (242)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHhcccchhHHHHHHHHHhcCCC
Confidence 3466678899999999999999999995
No 275
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=64.69 E-value=7.7 Score=25.83 Aligned_cols=30 Identities=7% Similarity=-0.040 Sum_probs=27.1
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCCcHH
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPNNEQ 32 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~ 32 (150)
+|..++-.++|.+|.+++.+|++.-|....
T Consensus 20 lGr~~~~~~~y~~A~~~L~~A~~~~~~~~~ 49 (203)
T 3t5x_A 20 VGRKAMFDSDFKQAEEYLSFAFEHCHRSSQ 49 (203)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHCCHhHH
Confidence 789999999999999999999999887654
No 276
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=63.04 E-value=28 Score=24.48 Aligned_cols=45 Identities=22% Similarity=0.113 Sum_probs=34.6
Q ss_pred HHHhcCcchhhhHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcc
Q psy3020 87 KEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHI 137 (150)
Q Consensus 87 ~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~ 137 (150)
..+...|.+ +..-..+-..++-.|+++-|.+.+.-+.+++|+...
T Consensus 22 ~~VR~~P~d------a~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~ 66 (273)
T 1zbp_A 22 EAIKASPKD------ASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLP 66 (273)
T ss_dssp HHHHTCTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHHhCCcC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhH
Confidence 335555555 555566677778889999999999999999998643
No 277
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=62.21 E-value=14 Score=27.99 Aligned_cols=37 Identities=16% Similarity=0.082 Sum_probs=32.9
Q ss_pred HHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhh-cCCCc
Q psy3020 100 AKISLLKDKGNAALQANNFKEAIEAYSEAIKL-DGTNH 136 (150)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-~p~~~ 136 (150)
..+.-.+.+|..++..++|.+|.+++..|+.. -|.+.
T Consensus 218 q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~~ 255 (455)
T 3t5v_B 218 QQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLPL 255 (455)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCC
T ss_pred ceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCccc
Confidence 44788899999999999999999999999999 88653
No 278
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=61.45 E-value=6.3 Score=23.90 Aligned_cols=21 Identities=19% Similarity=0.463 Sum_probs=13.3
Q ss_pred HHHHhhCCHHHHHHHHHHhhc
Q psy3020 5 SCLSYLGRYKESISTYEEGLK 25 (150)
Q Consensus 5 ~~~~~~~~~~~A~~~~~~aL~ 25 (150)
.-.-..|+|++|+..|..|++
T Consensus 26 ve~D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 26 AQEDKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHH
Confidence 334456777777777666654
No 279
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=59.58 E-value=19 Score=24.51 Aligned_cols=40 Identities=8% Similarity=0.274 Sum_probs=34.1
Q ss_pred HHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-Hhhh
Q psy3020 5 SCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQE 44 (150)
Q Consensus 5 ~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g 44 (150)
..+.+.|.|++|.+.+++...-+|++......|..+ +..+
T Consensus 122 ~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~~Kd 162 (235)
T 3bu8_A 122 IICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIREKN 162 (235)
T ss_dssp HHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHHTC
T ss_pred HHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHHhccC
Confidence 356788999999999999999988888888888887 5544
No 280
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=56.28 E-value=3.2 Score=33.00 Aligned_cols=44 Identities=14% Similarity=0.142 Sum_probs=38.1
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-Hhhhhc
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMN 46 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g~~ 46 (150)
.|...+..|+|.-|.+..+.++..+|+|.++..-++++ .++|..
T Consensus 467 ~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~ 511 (668)
T 2yhe_A 467 QMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQ 511 (668)
Confidence 35566788999999999999999999999999888888 777743
No 281
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=50.74 E-value=13 Score=24.85 Aligned_cols=40 Identities=13% Similarity=0.167 Sum_probs=29.5
Q ss_pred HHHHhhCCHHHHHHHHHHhhccCCCcHHHHHHHHHH-Hhhh
Q psy3020 5 SCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQE 44 (150)
Q Consensus 5 ~~~~~~~~~~~A~~~~~~aL~~~p~~~~a~~~l~~~-~~~g 44 (150)
....+.|.+++|.+.+++...-+|++......|..+ +..+
T Consensus 125 ~VCiekg~Fk~A~eiLkr~f~~~~~~~~lr~kL~~II~~Kd 165 (211)
T 3bqo_A 125 AVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMIISQKD 165 (211)
T ss_dssp HHHHHTTCHHHHHHHHHHHC-----CCTTHHHHHHHHHTTC
T ss_pred HHHHHccchHHHHHHHHHHhcCCCCchHHHHHHHHHHHccC
Confidence 467889999999999999999999999888888877 5544
No 282
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=47.81 E-value=27 Score=23.44 Aligned_cols=38 Identities=18% Similarity=0.147 Sum_probs=25.5
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHH
Q psy3020 106 KDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRS 143 (150)
Q Consensus 106 ~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a 143 (150)
...-.++++.|.|++|.+.+++...-+|++..+..-+.
T Consensus 121 ~qAV~VCiekg~Fk~A~eiLkr~f~~~~~~~~lr~kL~ 158 (211)
T 3bqo_A 121 IQAIAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLL 158 (211)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHC-----CCTTHHHHH
T ss_pred HHHHHHHHHccchHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 44556788999999999999999988887766544443
No 283
>3s6n_M SurviVal motor neuron protein; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2leh_B
Probab=46.58 E-value=15 Score=17.12 Aligned_cols=16 Identities=19% Similarity=0.567 Sum_probs=12.5
Q ss_pred CHHHHHHHHHHhhccC
Q psy3020 12 RYKESISTYEEGLKLD 27 (150)
Q Consensus 12 ~~~~A~~~~~~aL~~~ 27 (150)
-|++|...|+.+|+.+
T Consensus 17 ayDKAVaSfk~alk~~ 32 (37)
T 3s6n_M 17 AYDKAVASFKHALKNG 32 (37)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 4788888888888754
No 284
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=46.57 E-value=77 Score=22.62 Aligned_cols=25 Identities=20% Similarity=0.145 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHH
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYS 126 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~ 126 (150)
+..+..+|..+++.|++.+|..+|-
T Consensus 134 p~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 134 PYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 7889999999999999999999884
No 285
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=43.72 E-value=96 Score=22.91 Aligned_cols=28 Identities=7% Similarity=-0.031 Sum_probs=23.5
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q psy3020 106 KDKGNAALQANNFKEAIEAYSEAIKLDG 133 (150)
Q Consensus 106 ~~~g~~~~~~~~~~~A~~~~~~al~~~p 133 (150)
..+|..++..|+|.+|.+.+++.++.-.
T Consensus 103 ~kL~~l~~~~~~y~~a~~~i~~l~~~~~ 130 (394)
T 3txn_A 103 ARLIALYFDTALYTEALALGAQLLRELK 130 (394)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 3689999999999999999999887433
No 286
>4gof_A Small glutamine-rich tetratricopeptide repeat-CON protein alpha; four-helix bundle, protein-protein interaction, UBL4A ubiqui domain; 1.35A {Homo sapiens} PDB: 4goe_A 4god_A
Probab=43.02 E-value=25 Score=17.96 Aligned_cols=23 Identities=17% Similarity=0.215 Sum_probs=18.9
Q ss_pred cCHHHHHHHHHHHHhhcCCCcch
Q psy3020 116 NNFKEAIEAYSEAIKLDGTNHIL 138 (150)
Q Consensus 116 ~~~~~A~~~~~~al~~~p~~~~~ 138 (150)
...+-|++|...+..++|++..+
T Consensus 28 ESleVAiqCi~~aF~v~~~d~~l 50 (52)
T 4gof_A 28 ESLEVAIQCLETAFGVTVEDSDL 50 (52)
T ss_dssp HHHHHHHHHHHHHHTCCSSCCTT
T ss_pred HHHHHHHHHHHHHcCCCcccccc
Confidence 44578999999999999988643
No 287
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=42.59 E-value=1.6e+02 Score=25.20 Aligned_cols=90 Identities=8% Similarity=0.022 Sum_probs=55.1
Q ss_pred hhHHHHhhCCHHHHHHHHHHhh-----ccCCCcHHHHHHHHHHHhhhhccCCCCCchhhhhCChHHHH--hhccCCCCCC
Q psy3020 3 TYSCLSYLGRYKESISTYEEGL-----KLDPNNEQMKEAIKDVRNQEMNDMNRGDPFANLFSDPNIFV--QLQLDPRTKP 75 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL-----~~~p~~~~a~~~l~~~~~~g~~~~~~~~~~~~a~~~~~~~~--~l~~~~~~~~ 75 (150)
+-.+|.+.|+.++|.+.|++-- ...||-......+..+-..| .+.+|. .-+.+ .-...|+
T Consensus 133 LIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G--------~~~eA~--~Lf~eM~~~G~~PD--- 199 (1134)
T 3spa_A 133 FFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQG--------AFKELV--YVLFMVKDAGLTPD--- 199 (1134)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHT--------CHHHHH--HHHHHHHHTTCCCC---
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCC--------CHHHHH--HHHHHHHHcCCCCc---
Confidence 4468899999999999996633 25676554443332223555 344444 11111 1122332
Q ss_pred CCCChHHHHHHHHHhcCcchhhhHHHhHHHHHHHHHHHHhcC-HHHHHHHHHHHHhh
Q psy3020 76 FLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANN-FKEAIEAYSEAIKL 131 (150)
Q Consensus 76 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~A~~~~~~al~~ 131 (150)
..+|..+-..+.+.|+ .++|.+.|++..+.
T Consensus 200 --------------------------vvTYntLI~glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 200 --------------------------LLSYAAALQCMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp --------------------------HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred --------------------------HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 5667777777788887 47888999988774
No 288
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=37.22 E-value=34 Score=26.42 Aligned_cols=44 Identities=7% Similarity=-0.093 Sum_probs=32.6
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCCcHH-------HHHHHHHH-Hhhhhc
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPNNEQ-------MKEAIKDV-RNQEMN 46 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~-------a~~~l~~~-~~~g~~ 46 (150)
+|..+.-.++|.+|.+++..|++.-|.+.. ++..+.-+ ..+|+.
T Consensus 276 ~GRI~a~q~~Y~eA~~~L~~A~rkap~~~~a~gfr~~a~K~lI~V~LLlG~i 327 (523)
T 4b4t_S 276 LSKINAIQLDYSTANEYIIAAIRKAPHNSKSLGFLQQSNKLHCCIQLLMGDI 327 (523)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTSSCSCSSSCSHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCcchhhhhHHHHHHHHHHhHHhhcCCC
Confidence 689999999999999999999998875432 33334444 556743
No 289
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=41.87 E-value=7.8 Score=30.85 Aligned_cols=47 Identities=13% Similarity=0.125 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcHHHHHHhc
Q psy3020 103 SLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149 (150)
Q Consensus 103 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~a~~~~~~ 149 (150)
......+...+..|+|.-|.+..+.++..+|+|..+..-+|.+|-++
T Consensus 462 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l 508 (668)
T 2yhe_A 462 DAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQL 508 (668)
Confidence 44455677778899999999999999999999999988888887665
No 290
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=35.50 E-value=87 Score=20.03 Aligned_cols=37 Identities=14% Similarity=0.113 Sum_probs=30.3
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCCc---HHHHHHHHH
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPNN---EQMKEAIKD 39 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~~---~~a~~~l~~ 39 (150)
-|..+++.|+|=+|-+.++.+++..|.. ...+++|.+
T Consensus 38 ~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ 77 (161)
T 2ijq_A 38 HGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQ 77 (161)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHH
T ss_pred HHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 4678899999999999999999987654 456677776
No 291
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=34.92 E-value=8.1 Score=26.91 Aligned_cols=26 Identities=19% Similarity=0.337 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhh
Q psy3020 106 KDKGNAALQANNFKEAIEAYSEAIKL 131 (150)
Q Consensus 106 ~~~g~~~~~~~~~~~A~~~~~~al~~ 131 (150)
...+.-+=..|+|++|+.+|.+++++
T Consensus 27 v~~AVe~D~~g~y~eAl~lY~eaIe~ 52 (257)
T 2ymb_A 27 LKRAVELDSESRYPQALVCYQEGIDL 52 (257)
T ss_dssp --------------------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 33333344667777777777777653
No 292
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=33.29 E-value=25 Score=19.90 Aligned_cols=25 Identities=8% Similarity=0.185 Sum_probs=18.3
Q ss_pred cCHHHHHHHHHHHHhhcCCCcchhh
Q psy3020 116 NNFKEAIEAYSEAIKLDGTNHILFS 140 (150)
Q Consensus 116 ~~~~~A~~~~~~al~~~p~~~~~~~ 140 (150)
++..+++..-.++|+.+|+||.+.-
T Consensus 24 ~~~~~~v~~Ai~~L~~~PsnPa~LA 48 (85)
T 2ca5_A 24 QTLQGELTLALDKLAKNPSNPQLLA 48 (85)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 4556677777778889999987643
No 293
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=33.06 E-value=51 Score=23.77 Aligned_cols=28 Identities=29% Similarity=0.283 Sum_probs=23.6
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q psy3020 106 KDKGNAALQANNFKEAIEAYSEAIKLDG 133 (150)
Q Consensus 106 ~~~g~~~~~~~~~~~A~~~~~~al~~~p 133 (150)
...|-.+++.|+|++|+..|+..|..-|
T Consensus 118 Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~ 145 (325)
T 3mv2_A 118 MNEGYKNFKLNKPDIAIECFREAIYRIT 145 (325)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhh
Confidence 4467778999999999999999987654
No 294
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=32.72 E-value=1.4e+02 Score=21.59 Aligned_cols=24 Identities=17% Similarity=0.176 Sum_probs=21.8
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHH
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAY 125 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~ 125 (150)
+..+..+|..+++.+++.+|..+|
T Consensus 136 p~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 136 PELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCHHHHHHHH
Confidence 778888999999999999998887
No 295
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=32.46 E-value=68 Score=23.97 Aligned_cols=32 Identities=19% Similarity=0.180 Sum_probs=28.2
Q ss_pred HHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Q psy3020 100 AKISLLKDKGNAALQANNFKEAIEAYSEAIKL 131 (150)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 131 (150)
.+..++..++.++...|+|++|++..+++|..
T Consensus 194 tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 194 NRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 44778888999999999999999999999864
No 296
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=32.08 E-value=71 Score=23.81 Aligned_cols=32 Identities=16% Similarity=0.052 Sum_probs=28.1
Q ss_pred HHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Q psy3020 100 AKISLLKDKGNAALQANNFKEAIEAYSEAIKL 131 (150)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 131 (150)
.+..++..++++++..|+|++|++..+++|..
T Consensus 188 tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 188 NKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 44778888999999999999999999999864
No 297
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=32.06 E-value=70 Score=24.20 Aligned_cols=32 Identities=16% Similarity=0.084 Sum_probs=28.4
Q ss_pred HHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Q psy3020 100 AKISLLKDKGNAALQANNFKEAIEAYSEAIKL 131 (150)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 131 (150)
.+..++..++.+++..++|++|+.+.++++..
T Consensus 201 tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 201 DNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 44778888999999999999999999999875
No 298
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=31.55 E-value=72 Score=23.89 Aligned_cols=33 Identities=15% Similarity=0.150 Sum_probs=28.8
Q ss_pred HHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Q psy3020 100 AKISLLKDKGNAALQANNFKEAIEAYSEAIKLD 132 (150)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 132 (150)
.+..++..++.+++..|+|++|+++.+++|...
T Consensus 200 tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 200 NYWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 447788889999999999999999999999753
No 299
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=31.10 E-value=61 Score=23.31 Aligned_cols=29 Identities=14% Similarity=0.101 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q psy3020 105 LKDKGNAALQANNFKEAIEAYSEAIKLDG 133 (150)
Q Consensus 105 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p 133 (150)
-...|-.+++.|+|++|+..|+..|..-|
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~ 133 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVP 133 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Confidence 34567778999999999999999988765
No 300
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=29.73 E-value=81 Score=23.65 Aligned_cols=32 Identities=19% Similarity=0.066 Sum_probs=28.1
Q ss_pred HHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Q psy3020 100 AKISLLKDKGNAALQANNFKEAIEAYSEAIKL 131 (150)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 131 (150)
.+..++..++.+++..|+|++|+.+.+++|..
T Consensus 195 tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 195 NKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 34778888999999999999999999999964
No 301
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=27.44 E-value=48 Score=22.49 Aligned_cols=30 Identities=10% Similarity=0.224 Sum_probs=24.4
Q ss_pred hhHHHHhhCCHHHHHHHHHHhhccCCCcHH
Q psy3020 3 TYSCLSYLGRYKESISTYEEGLKLDPNNEQ 32 (150)
Q Consensus 3 lg~~~~~~~~~~~A~~~~~~aL~~~p~~~~ 32 (150)
-|..+...|++++|-+.|+.+++-.-.-.+
T Consensus 156 wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P~~ 185 (223)
T 4aez_C 156 YANYFESRGLFQKADEVYQKGKRMKAKPFL 185 (223)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHTCBSHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCccHH
Confidence 467788999999999999999987655433
No 302
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=27.16 E-value=1.5e+02 Score=20.10 Aligned_cols=32 Identities=16% Similarity=0.213 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKLDG 133 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p 133 (150)
+.-|..-+..+-..|+|.+|.+.|..+++..-
T Consensus 150 AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A 181 (223)
T 4aez_C 150 SIFYEEYANYFESRGLFQKADEVYQKGKRMKA 181 (223)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 55566667777789999999999999999764
No 303
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=27.13 E-value=74 Score=23.82 Aligned_cols=32 Identities=22% Similarity=0.008 Sum_probs=28.2
Q ss_pred HHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Q psy3020 100 AKISLLKDKGNAALQANNFKEAIEAYSEAIKL 131 (150)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 131 (150)
.+..++..++++++.+++|++|++..++++.-
T Consensus 189 tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 189 NTDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 34778888999999999999999999999864
No 304
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=26.69 E-value=97 Score=17.84 Aligned_cols=25 Identities=8% Similarity=0.216 Sum_probs=17.5
Q ss_pred CHHHHHHHHHHhhccCCCcHHHHHH
Q psy3020 12 RYKESISTYEEGLKLDPNNEQMKEA 36 (150)
Q Consensus 12 ~~~~A~~~~~~aL~~~p~~~~a~~~ 36 (150)
...+++..-..+|+.+|+|+-++-.
T Consensus 31 ~~~~~l~~Al~~L~~~psNPa~LAe 55 (92)
T 2g0u_A 31 DLNKQLQDAQANLTKNPSDPTALAN 55 (92)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 3445666666777899999987533
No 305
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=25.33 E-value=1.5e+02 Score=19.68 Aligned_cols=32 Identities=13% Similarity=-0.033 Sum_probs=26.3
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKLDG 133 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p 133 (150)
+.-|..-+..+-..|++.+|.+.|..+++..-
T Consensus 115 AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A 146 (202)
T 3esl_A 115 SLFYEEFSKLLENAQFFLEAKVLLELGAENNC 146 (202)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 55556667777789999999999999999764
No 306
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=25.10 E-value=1e+02 Score=17.51 Aligned_cols=27 Identities=11% Similarity=0.048 Sum_probs=22.7
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHH
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEA 128 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~a 128 (150)
+..|..-|..++++|++..|+.++.=+
T Consensus 39 A~~Y~~Da~~fl~kGD~v~Ala~isYa 65 (87)
T 2pmr_A 39 ALNYRDDSVYYLEKGDHITSFGCITYA 65 (87)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 677888899999999999999887643
No 307
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=24.99 E-value=1.9e+02 Score=20.73 Aligned_cols=34 Identities=21% Similarity=0.239 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCCC
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTN 135 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~ 135 (150)
..++..--...++.++|.-|-..-++.|++.|..
T Consensus 198 ~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~ 231 (320)
T 3mkr_B 198 ILVLRTALNLFFKLKNFRTAAAFARRLLELGPKP 231 (320)
T ss_dssp HHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCH
Confidence 5566666667789999999999999999998853
No 308
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=24.45 E-value=1.4e+02 Score=20.34 Aligned_cols=32 Identities=22% Similarity=0.240 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCC
Q psy3020 103 SLLKDKGNAALQANNFKEAIEAYSEAIKLDGT 134 (150)
Q Consensus 103 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 134 (150)
..+..++.+.-+.++|++.+++..+.++.+|+
T Consensus 6 e~~v~~AklaeqaeRyddm~~~mk~v~~~~~e 37 (234)
T 2br9_A 6 EDLVYQAKLAEQAERYDEMVESMKKVAGMDVE 37 (234)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHhcccCC
Confidence 34556777788889999999999999998875
No 309
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=24.35 E-value=1.1e+02 Score=23.24 Aligned_cols=32 Identities=22% Similarity=0.294 Sum_probs=28.3
Q ss_pred HHhHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Q psy3020 100 AKISLLKDKGNAALQANNFKEAIEAYSEAIKL 131 (150)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 131 (150)
.+..++..++.+++..++|++|+...++++..
T Consensus 180 tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 180 TKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44778888999999999999999999999964
No 310
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=24.15 E-value=1.1e+02 Score=17.40 Aligned_cols=27 Identities=19% Similarity=0.128 Sum_probs=22.7
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHH
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEA 128 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~a 128 (150)
+..|..-|..++++|++..|+.++.=+
T Consensus 35 A~~Y~~Da~~fl~kGD~v~Ala~isYa 61 (86)
T 2oo2_A 35 IEAYISDSRYFLEKGDLVRAFECVVWA 61 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 677888899999999999999887643
No 311
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=24.03 E-value=1.2e+02 Score=17.88 Aligned_cols=29 Identities=17% Similarity=-0.031 Sum_probs=18.9
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIK 130 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 130 (150)
+.....-+....+.|+|++|-+...+|=+
T Consensus 20 ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~ 48 (105)
T 2e2a_A 20 ARSKLLEALKAAENGDFAKADSLVVEAGS 48 (105)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 34444445556788888888887776643
No 312
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=23.94 E-value=52 Score=18.86 Aligned_cols=14 Identities=29% Similarity=0.472 Sum_probs=6.4
Q ss_pred cCHHHHHHHHHHHH
Q psy3020 116 NNFKEAIEAYSEAI 129 (150)
Q Consensus 116 ~~~~~A~~~~~~al 129 (150)
|+-++|++.|.+.+
T Consensus 33 G~k~~A~~~YkkGi 46 (89)
T 3eab_A 33 GQKEQAVEWYKKGI 46 (89)
T ss_dssp SSGGGSHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 44444444444443
No 313
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=23.54 E-value=1.2e+02 Score=17.78 Aligned_cols=28 Identities=11% Similarity=0.048 Sum_probs=17.8
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAI 129 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al 129 (150)
+.....-+....+.|+|++|-+...++-
T Consensus 18 Ars~~~eAl~~Ak~g~fe~A~~~l~eA~ 45 (103)
T 1wcr_A 18 ARSLAYAALKQAKQGDFAAAKAMMDQSR 45 (103)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3344444555567888888877776654
No 314
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=23.39 E-value=2.5e+02 Score=22.37 Aligned_cols=33 Identities=12% Similarity=0.120 Sum_probs=24.3
Q ss_pred hHHHHHHHHHH--HHhcCHHHHHHHHHHHHhhcCCC
Q psy3020 102 ISLLKDKGNAA--LQANNFKEAIEAYSEAIKLDGTN 135 (150)
Q Consensus 102 ~~~~~~~g~~~--~~~~~~~~A~~~~~~al~~~p~~ 135 (150)
...+..+..++ +..|+|+.|++..++ +.+-|-+
T Consensus 536 ~~lLl~l~~f~~~~~~g~~~~AL~~i~~-L~llPl~ 570 (661)
T 2qx5_A 536 CMLLLNISSIRELYFNKQWQETLSQMEL-LDLLPFS 570 (661)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHH-TSCSCC-
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHh-CCCCCCC
Confidence 44555555555 789999999999888 6677765
No 315
>2etd_A LEMA protein; bromodomain-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.28A {Thermotoga maritima} SCOP: a.29.9.1
Probab=23.30 E-value=47 Score=21.47 Aligned_cols=29 Identities=21% Similarity=0.259 Sum_probs=18.3
Q ss_pred HHHHhcCHHHHHHHHHHHHhhcCCCcchh
Q psy3020 111 AALQANNFKEAIEAYSEAIKLDGTNHILF 139 (150)
Q Consensus 111 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 139 (150)
+...+..|.+|+..|+..+...|.+..+.
T Consensus 119 Ia~ARr~YN~aV~~yN~~i~~FP~~ivA~ 147 (171)
T 2etd_A 119 IAVARRDYNEAVXXYNTAIXXFPGVIFAX 147 (171)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHHHHHhcccccCcHHHHHH
Confidence 34567889999999999999999876543
No 316
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=22.98 E-value=1.5e+02 Score=18.88 Aligned_cols=32 Identities=16% Similarity=0.206 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcC
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKLDG 133 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p 133 (150)
+.-|..-+..+-..|++.+|.+.|..+++.+.
T Consensus 96 AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A 127 (164)
T 2wvi_A 96 AQFYISWAEEYEARENFRKADAIFQEGIQQKA 127 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 55556667777789999999999999999764
No 317
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=22.83 E-value=68 Score=24.02 Aligned_cols=30 Identities=7% Similarity=0.114 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHHHhc-CHHHHHHHHHHHHhh
Q psy3020 102 ISLLKDKGNAALQAN-NFKEAIEAYSEAIKL 131 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~-~~~~A~~~~~~al~~ 131 (150)
++.+...+.++.+.| +..+|+..+++....
T Consensus 321 aEvyLi~AEA~~~~gg~~~~A~~~lN~vR~r 351 (460)
T 3snx_A 321 AEMYLIEAEAKVRDGVALDQAVAPLNTLRTA 351 (460)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 788888999999999 999999888877653
No 318
>2lxb_A Small glutamine-rich tetratricopeptide repeat-CON protein 2; four-helix bundle, protein-protein interaction, GET5 binding GET pathway; NMR {Saccharomyces cerevisiae} PDB: 2lxc_B
Probab=22.07 E-value=76 Score=17.48 Aligned_cols=22 Identities=18% Similarity=0.289 Sum_probs=18.4
Q ss_pred cCHHHHHHHHHHHHhhcCCCcc
Q psy3020 116 NNFKEAIEAYSEAIKLDGTNHI 137 (150)
Q Consensus 116 ~~~~~A~~~~~~al~~~p~~~~ 137 (150)
...+-|++|...+..++|++..
T Consensus 33 ESLeVAiqCI~~aF~v~~~d~~ 54 (74)
T 2lxb_A 33 DSLNVAMDCISEAFGFEREAVS 54 (74)
T ss_dssp HHHHHHHHHHHHHHTCCTTTHH
T ss_pred HHHHHHHHHHHHHhCCCchhhH
Confidence 3457899999999999998854
No 319
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=21.80 E-value=2e+02 Score=19.62 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhhcCCCcchhhcH
Q psy3020 107 DKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNR 142 (150)
Q Consensus 107 ~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~n~ 142 (150)
..-.+++++|.|++|.+.+.+...-+|.+-.+..-+
T Consensus 119 qAV~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL 154 (235)
T 3bu8_A 119 AAVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDL 154 (235)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHH
T ss_pred HHHHHHHHhcchHHHHHHHHHHhcCCCCchHHHHHH
Confidence 345567899999999999999999776655444333
No 320
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=21.60 E-value=68 Score=23.91 Aligned_cols=30 Identities=10% Similarity=0.035 Sum_probs=25.0
Q ss_pred hHHHHHHHHHHHHhc--CHHHHHHHHHHHHhh
Q psy3020 102 ISLLKDKGNAALQAN--NFKEAIEAYSEAIKL 131 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~--~~~~A~~~~~~al~~ 131 (150)
++.+...+.++.+.| +..+|+..+++....
T Consensus 335 aEv~Li~AEA~~~~gg~~~~~A~~~lN~vR~R 366 (454)
T 3myv_A 335 SEVYLIAAEAGCKLGGDAAVQGLGYLNEIVKR 366 (454)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 788888899998888 889999888877654
No 321
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=21.59 E-value=1.2e+02 Score=22.60 Aligned_cols=29 Identities=21% Similarity=0.186 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIK 130 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 130 (150)
...+..+|..+++.+++.+|++++-+|-.
T Consensus 296 vYPYtylgGy~yR~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 296 IYPYTYLGGYYYRKKKYYEAIASWVDAGY 324 (472)
T ss_dssp SHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccchhhhhhhhhhcchHHHHHHHHHHHHH
Confidence 67888899999999999999999988865
No 322
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=21.55 E-value=2e+02 Score=24.69 Aligned_cols=45 Identities=9% Similarity=0.086 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHh--hcCCCcchhhcHHHHHH
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIK--LDGTNHILFSNRSAAFA 147 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~n~a~~~~ 147 (150)
..+|..+...+.+.|++++|.+.|.+..+ +.| |...|.-+-.++.
T Consensus 165 vvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~P-DvvTYntLI~glc 211 (1134)
T 3spa_A 165 LDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTP-DLLSYAAALQCMG 211 (1134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCC-cHHHHHHHHHHHH
Confidence 57788888888899999999999998876 446 3344444444444
No 323
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=21.19 E-value=69 Score=24.22 Aligned_cols=25 Identities=8% Similarity=0.058 Sum_probs=22.5
Q ss_pred hhhHHHHhhCCHHHHHHHHHHhhcc
Q psy3020 2 TTYSCLSYLGRYKESISTYEEGLKL 26 (150)
Q Consensus 2 ~lg~~~~~~~~~~~A~~~~~~aL~~ 26 (150)
.+|++|+..++|++|+...++++..
T Consensus 208 llArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 208 ILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 4789999999999999999999864
No 324
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=21.05 E-value=1.4e+02 Score=17.68 Aligned_cols=28 Identities=18% Similarity=0.035 Sum_probs=18.3
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAI 129 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al 129 (150)
+.....-+....+.|+|++|-+...++=
T Consensus 22 Ars~~~eAl~~Ak~gdfe~A~~~l~eA~ 49 (109)
T 3k1s_A 22 ARSFAMEALQFAKQGKMAEADEAMVKAK 49 (109)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3344444555567888888888777663
No 325
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=20.79 E-value=72 Score=23.91 Aligned_cols=29 Identities=17% Similarity=0.173 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHHhcCH-HHHHHHHHHHHh
Q psy3020 102 ISLLKDKGNAALQANNF-KEAIEAYSEAIK 130 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~-~~A~~~~~~al~ 130 (150)
++.+...+.++.+.|+. .+|+..+++...
T Consensus 357 aEvyLi~AEA~~~~g~~~~~A~~~lN~vR~ 386 (477)
T 3mcx_A 357 SEVYLNAAEAGLKKGTDIEEAQGYLNDIIS 386 (477)
T ss_dssp HHHHHHHHHHHHHHTSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCChHHHHHHHHHHHH
Confidence 78888899999999998 899999988776
No 326
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=20.77 E-value=1.5e+02 Score=22.70 Aligned_cols=31 Identities=16% Similarity=0.340 Sum_probs=27.7
Q ss_pred HHhHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q psy3020 100 AKISLLKDKGNAALQANNFKEAIEAYSEAIK 130 (150)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 130 (150)
.+..++..++.++...++|++|.+..++.+.
T Consensus 196 tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 226 (528)
T 3i4g_A 196 CKQAALAFLGRTCMLQKDWKSGAKAFHDIME 226 (528)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 4477888899999999999999999999986
No 327
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=20.52 E-value=1.5e+02 Score=17.90 Aligned_cols=28 Identities=18% Similarity=0.152 Sum_probs=18.7
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAI 129 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al 129 (150)
+.....-+....+.|+|++|-+...+|-
T Consensus 37 ARS~~~eAl~~Ak~gdfe~A~~~l~eA~ 64 (120)
T 3l8r_A 37 ARSIVHEAFDAMREKNYILAEQKLQEAN 64 (120)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3444444555567899988888877763
No 328
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=20.49 E-value=73 Score=23.78 Aligned_cols=30 Identities=13% Similarity=0.176 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKL 131 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 131 (150)
++.+...+.++.+.|+..+|+..+++....
T Consensus 338 aEv~Li~AEA~~~~g~~~~A~~~lN~vR~R 367 (461)
T 3kez_A 338 SEAYLNAAEAAVQTGDNAKAVKYLNSIVQR 367 (461)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCchHHHHHHHHHHHh
Confidence 788888999999999999999988876553
No 329
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=20.41 E-value=1.7e+02 Score=18.24 Aligned_cols=37 Identities=11% Similarity=-0.023 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHh----hcCCCcch
Q psy3020 102 ISLLKDKGNAALQANNFKEAIEAYSEAIK----LDGTNHIL 138 (150)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~----~~p~~~~~ 138 (150)
+..+...+.++...|+.+.|.-.|-+.+. .-|.++..
T Consensus 40 a~~llr~A~~y~~egd~e~AYily~R~~~L~~e~IpkHpdy 80 (146)
T 2xze_A 40 GVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPKHRDY 80 (146)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTGGGSTTT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHcccCccc
Confidence 56677788999999999999999988543 44655544
No 330
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=20.13 E-value=2e+02 Score=19.97 Aligned_cols=30 Identities=17% Similarity=0.028 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Q psy3020 103 SLLKDKGNAALQANNFKEAIEAYSEAIKLD 132 (150)
Q Consensus 103 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 132 (150)
..+..++.+.-+.++|++.+++..+.++.+
T Consensus 9 e~~v~~AkLaeqaeRyddm~~~mk~v~~~~ 38 (260)
T 1o9d_A 9 EENVYMAKLAEQAERYEEMVEFMEKVSNSL 38 (260)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHccC
Confidence 445667777888999999999999999988
Done!