RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3020
(150 letters)
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT
{Human (Homo sapiens) [TaxId: 9606]}
Length = 388
Score = 42.4 bits (98), Expect = 6e-06
Identities = 21/144 (14%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 5 SCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDVRNQEMNDMNRGDPFANLFSDPNIF 64
G +I TY ++L P+ + + +E + + N
Sbjct: 245 CVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANAL-KEKGSVAEAEDCYNTALRLCPT 303
Query: 65 VQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEA 124
L+ + + ++ +K +L + + + Q +EA+
Sbjct: 304 HADSLNNLANIKREQGNIEEAVRLYRK--ALEVFPEFAAAHSNLASVLQQQGKLQEALMH 361
Query: 125 YSEAIKLDGTNHILFSNRSAAFAK 148
Y EAI++ T +SN +
Sbjct: 362 YKEAIRISPTFADAYSNMGNTLKE 385
Score = 35.8 bits (81), Expect = 0.001
Identities = 6/44 (13%), Positives = 16/44 (36%)
Query: 105 LKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148
+ + QA +F+ A + + + N + S+ +
Sbjct: 2 PMELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQ 45
Score = 31.2 bits (69), Expect = 0.037
Identities = 7/45 (15%), Positives = 14/45 (31%)
Query: 102 ISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAF 146
+L + Q + + AIK + +SN +
Sbjct: 33 TGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVY 77
Score = 29.6 bits (65), Expect = 0.14
Identities = 11/67 (16%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
Query: 82 YVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSN 141
+ + + + SL A + + + AI+ Y AI+L + N
Sbjct: 219 FDRAVAAYLRALSLSPNHAVV--HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCN 276
Query: 142 RSAAFAK 148
+ A +
Sbjct: 277 LANALKE 283
Score = 28.5 bits (62), Expect = 0.29
Identities = 4/27 (14%), Positives = 7/27 (25%)
Query: 6 CLSYLGRYKESISTYEEGLKLDPNNEQ 32
R S +K +P +
Sbjct: 42 IHFQCRRLDRSAHFSTLAIKQNPLLAE 68
Score = 26.6 bits (57), Expect = 1.4
Identities = 3/20 (15%), Positives = 10/20 (50%)
Query: 11 GRYKESISTYEEGLKLDPNN 30
G ++ + + + +P+N
Sbjct: 13 GDFEAAERHCMQLWRQEPDN 32
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing
protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 201
Score = 39.6 bits (91), Expect = 4e-05
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 105 LKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAF 146
LK++GN + EA Y AI + + ++NR+ +
Sbjct: 7 LKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCY 48
Score = 27.2 bits (59), Expect = 0.66
Identities = 5/27 (18%), Positives = 9/27 (33%)
Query: 6 CLSYLGRYKESISTYEEGLKLDPNNEQ 32
C + Y E+I+ + L
Sbjct: 81 CQLEMESYDEAIANLQRAYSLAKEQRL 107
Score = 24.9 bits (53), Expect = 3.6
Identities = 13/132 (9%), Positives = 28/132 (21%), Gaps = 37/132 (28%)
Query: 10 LGRYKESISTYEEGLKLDPNNEQMKEAIKDVRNQEMNDMNRGDPFANLFSDPNIFVQLQL 69
+Y E+ + Y + +P +
Sbjct: 17 GRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQA------------------- 57
Query: 70 DPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAI 129
+ ++ D + G L+ ++ EAI A
Sbjct: 58 ------------LADCRRALELDGQSV------KAHFFLGQCQLEMESYDEAIANLQRAY 99
Query: 130 KLDGTNHILFSN 141
L + F +
Sbjct: 100 SLAKEQRLNFGD 111
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 36.6 bits (83), Expect = 2e-04
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 101 KISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHI 137
+++ LK+KGN AL N +A++ YSEAIKLD NH+
Sbjct: 2 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHV 38
Score = 33.9 bits (76), Expect = 0.002
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 1 MTTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDVR 41
+ L +L R++E+ TYEEGLK + NN Q+KE ++++
Sbjct: 75 SRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 115
Score = 26.2 bits (56), Expect = 1.0
Identities = 11/39 (28%), Positives = 15/39 (38%)
Query: 110 NAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148
A N F+EA Y E +K + N L A+
Sbjct: 79 AALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEAR 117
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1
(PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Length = 323
Score = 37.1 bits (84), Expect = 4e-04
Identities = 7/42 (16%), Positives = 17/42 (40%)
Query: 107 DKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148
++G LQ + A+ + A++ D + + A+
Sbjct: 24 EEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAE 65
Score = 32.1 bits (71), Expect = 0.022
Identities = 15/145 (10%), Positives = 39/145 (26%), Gaps = 3/145 (2%)
Query: 6 CLSYLGRYKESISTYEEGLKLDPNNEQMKEAIK-DVRNQEMNDMNRGDPFANLFSDPNIF 64
L + E + ++LDP + V + ++
Sbjct: 145 SLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN 204
Query: 65 VQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEA 124
L + + + + ++ L + + G + + +EA+E
Sbjct: 205 DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRS--RYNLGISCINLGAHREAVEH 262
Query: 125 YSEAIKLDGTNHILFSNRSAAFAKA 149
+ EA+ + + A
Sbjct: 263 FLEALNMQRKSRGPRGEGGAMSENI 287
Score = 29.8 bits (65), Expect = 0.13
Identities = 5/45 (11%), Positives = 16/45 (35%)
Query: 4 YSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDVRNQEMNDM 48
LG ++E++ + E L + + + + + +
Sbjct: 247 GISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTL 291
Score = 27.1 bits (58), Expect = 0.83
Identities = 15/139 (10%), Positives = 40/139 (28%), Gaps = 12/139 (8%)
Query: 10 LGRYKESISTYEEGLKLDPNNEQMKEAIKDVRNQEMNDMNRGDPFANLFSDPNIFVQLQL 69
G ++ +E ++ DP + + + + + + ++ +
Sbjct: 32 EGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALM 91
Query: 70 DPRTKPFLSD------PSYVQMIKEIQKDPSLMTLEAKISLL------KDKGNAALQANN 117
++ L+T + + K + L +
Sbjct: 92 ALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSL 151
Query: 118 FKEAIEAYSEAIKLDGTNH 136
F E E + A++LD T+
Sbjct: 152 FLEVKELFLAAVRLDPTSI 170
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 264
Score = 35.4 bits (81), Expect = 0.001
Identities = 10/41 (24%), Positives = 15/41 (36%)
Query: 109 GNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149
AL ++A+E EAIK + L S+
Sbjct: 3 WKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCID 43
Score = 32.3 bits (73), Expect = 0.013
Identities = 12/150 (8%), Positives = 44/150 (29%), Gaps = 30/150 (20%)
Query: 11 GRYKESISTYEEGLKLDPNN--------------EQMKEAIKDVRNQEMNDMNRGDPFAN 56
G+ ++++ E +K P + + A + + +
Sbjct: 10 GQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQ 69
Query: 57 LFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQAN 116
L L + + + + + ++ + + N ++ +
Sbjct: 70 L-------RHLVKAAQARKDFAQGAATAKVLGENEELTKSLVSF---------NLSMVSQ 113
Query: 117 NFKEAIEAYSEAIKLDGTNHILFSNRSAAF 146
++++ E + +L L ++ S +
Sbjct: 114 DYEQVSELALQIEELRQEKGFLANDTSFSD 143
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 128
Score = 34.5 bits (78), Expect = 0.002
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 105 LKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148
K+ GN A + +F A++ Y +A +LD TN +N++A + +
Sbjct: 7 EKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFE 50
Score = 29.1 bits (64), Expect = 0.11
Identities = 6/30 (20%), Positives = 13/30 (43%)
Query: 6 CLSYLGRYKESISTYEEGLKLDPNNEQMKE 35
+YK++I Y + L + +K+
Sbjct: 88 SYFKEEKYKDAIHFYNKSLAEHRTPDVLKK 117
Score = 27.9 bits (61), Expect = 0.26
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 108 KGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSA 144
GN+ + +K+AI Y++++ T +L + A
Sbjct: 85 IGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQA 121
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl
isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Length = 153
Score = 31.5 bits (70), Expect = 0.020
Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 3/64 (4%)
Query: 90 QKDPSLMTLEAKISL---LKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAF 146
+K T E K+ +K++GN + N EAI Y EA+
Sbjct: 2 KKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDK 61
Query: 147 AKAI 150
K I
Sbjct: 62 KKNI 65
Score = 31.1 bits (69), Expect = 0.030
Identities = 8/43 (18%), Positives = 17/43 (39%)
Query: 1 MTTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDVRNQ 43
Y G +E+ + L+PNN ++ + + N+
Sbjct: 105 YKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNK 147
Score = 24.6 bits (52), Expect = 4.4
Identities = 16/139 (11%), Positives = 38/139 (27%), Gaps = 21/139 (15%)
Query: 10 LGRYKESISTYEEGLKLDPNNEQMKEAIKDVRNQEMNDMNRGDPFANLFSDPNIFVQLQL 69
E+I Y+E L + E+ + I + + + + + + + +
Sbjct: 30 KNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIE-------ISCNLNLATCYNKNKD 82
Query: 70 DPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAI 129
P+ S + + +EA E +A
Sbjct: 83 YPKAIDHASKVLKIDKNNVKALYKLGVANMYF--------------GFLEEAKENLYKAA 128
Query: 130 KLDGTNHILFSNRSAAFAK 148
L+ N + ++ K
Sbjct: 129 SLNPNNLDIRNSYELCVNK 147
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 31.6 bits (70), Expect = 0.024
Identities = 8/46 (17%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Query: 96 MTLEAKIS---LLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHIL 138
M E K+ ++K++G + +K+A+ Y + +
Sbjct: 4 MNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSF 49
Score = 29.2 bits (64), Expect = 0.12
Identities = 6/43 (13%), Positives = 19/43 (44%)
Query: 1 MTTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDVRNQ 43
+ ++ + + +++ L+L PNN+ K + + +
Sbjct: 100 SRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQR 142
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey
(Saimiri boliviensis) [TaxId: 27679]}
Length = 168
Score = 31.1 bits (69), Expect = 0.028
Identities = 5/40 (12%), Positives = 18/40 (45%)
Query: 4 YSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDVRNQ 43
+ ++ + +E+ L+++P N+ + I + +
Sbjct: 105 GEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQKK 144
Score = 30.7 bits (68), Expect = 0.044
Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Query: 91 KDPSLMTLEAKISL---LKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAA 145
K+ M + K+ +K+KG + + +A+ Y + + + L S A
Sbjct: 1 KESWEMDTKEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKA 58
Score = 24.5 bits (52), Expect = 4.6
Identities = 5/33 (15%), Positives = 12/33 (36%)
Query: 116 NNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148
N F+ A + + ++++ N K
Sbjct: 112 NEFESAKGDFEKVLEVNPQNKAARLQIFMCQKK 144
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium
tepidum [TaxId: 1097]}
Length = 156
Score = 30.9 bits (68), Expect = 0.030
Identities = 9/61 (14%), Positives = 16/61 (26%), Gaps = 12/61 (19%)
Query: 100 AKISLLKDKGNAALQANNFKEAIEAYSEAIKLD------------GTNHILFSNRSAAFA 147
L L A + EA A+++ G + + + A A
Sbjct: 7 VGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALA 66
Query: 148 K 148
Sbjct: 67 G 67
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus)
[TaxId: 9913]}
Length = 169
Score = 30.4 bits (67), Expect = 0.050
Identities = 4/43 (9%), Positives = 19/43 (44%)
Query: 1 MTTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDVRNQ 43
L Y ++++ ++ ++ P ++ ++ + V+ +
Sbjct: 115 YRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQK 157
Score = 25.8 bits (55), Expect = 1.9
Identities = 10/40 (25%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 92 DPSLMTLEAKISL---LKDKGNAALQANNFKEAIEAYSEA 128
D L ++ + + LK+ GN ++ N++ AI+ Y++
Sbjct: 14 DVDLKDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKV 53
Score = 24.3 bits (51), Expect = 6.7
Identities = 3/39 (7%), Positives = 12/39 (30%)
Query: 110 NAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148
+ +A+ +A ++ + + + K
Sbjct: 119 QGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQK 157
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId:
562]}
Length = 259
Score = 29.8 bits (65), Expect = 0.11
Identities = 16/138 (11%), Positives = 35/138 (25%), Gaps = 3/138 (2%)
Query: 1 MTTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDV-RNQEMNDMNRGDPFANLFS 59
+ L Y GR K + + DPN+ + + + S
Sbjct: 109 LNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKS 168
Query: 60 DPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFK 119
D + ++ ++ + + E G L +
Sbjct: 169 DKEQWGWNIVEFYLGNISEQTLMERLKADATD--NTSLAEHLSETNFYLGKYYLSLGDLD 226
Query: 120 EAIEAYSEAIKLDGTNHI 137
A + A+ + N +
Sbjct: 227 SATALFKLAVANNVHNFV 244
Score = 24.4 bits (51), Expect = 7.0
Identities = 8/46 (17%), Positives = 19/46 (41%)
Query: 96 MTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSN 141
+T + + LL ++G A +S+A+ + +F+
Sbjct: 31 LTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNY 76
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2,
p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Length = 192
Score = 29.0 bits (64), Expect = 0.15
Identities = 8/44 (18%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Query: 105 LKDKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148
L ++G A ++K A++A+S + + N +
Sbjct: 8 LWNEGVLAADKKDWKGALDAFSAVQDP---HSRICFNIGCMYTI 48
Score = 27.5 bits (60), Expect = 0.50
Identities = 5/41 (12%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 6 CLSYLGRYKESISTYEEGLKL--DPNNEQMKEAIKDVRNQE 44
+ +K++ + +P + ++ +A++ V Q+
Sbjct: 129 MYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECVWKQK 169
Score = 24.0 bits (51), Expect = 7.8
Identities = 5/28 (17%), Positives = 11/28 (39%)
Query: 105 LKDKGNAALQANNFKEAIEAYSEAIKLD 132
L + + +K+A E + A +
Sbjct: 123 LYNIAFMYAKKEEWKKAEEQLALATSMK 150
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit
tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 145
Score = 29.1 bits (63), Expect = 0.15
Identities = 3/40 (7%), Positives = 10/40 (25%)
Query: 107 DKGNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAF 146
D + F++ + K + + +
Sbjct: 2 DTETEFDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVL 41
Score = 25.2 bits (53), Expect = 3.1
Identities = 14/132 (10%), Positives = 37/132 (28%), Gaps = 11/132 (8%)
Query: 10 LGRYKESISTYEEGLKLDPNNEQMKEAIKDVRNQEMNDMNRGDPFANL---------FSD 60
+ +++ E K +P + V + + D +
Sbjct: 10 ILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALL 69
Query: 61 PNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQAN--NF 118
+ + + S E + + L T + ++ + N +
Sbjct: 70 IDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMT 129
Query: 119 KEAIEAYSEAIK 130
+A + ++EA K
Sbjct: 130 AKAPQLHAEAYK 141
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase
alpha-subunit, N-terminal domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 334
Score = 29.2 bits (64), Expect = 0.17
Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 7/141 (4%)
Query: 6 CLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDVRNQEMNDMNRGDPFANLFSDPNIFV 65
L L +S + + E +++ + ND + L
Sbjct: 187 LLPQLHPQPDSGPQGR---LPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAEPLF 243
Query: 66 QLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAY 125
+ +L L ++ KE+Q+ + A KE ++ +
Sbjct: 244 RCELSVEKSTVLQS--ELESCKELQELEPENKWCLLT--IILLMRALDPLLYEKETLQYF 299
Query: 126 SEAIKLDGTNHILFSNRSAAF 146
S +D + + F
Sbjct: 300 STLKAVDPMRAAYLDDLRSKF 320
>d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase
(delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 275
Score = 28.2 bits (61), Expect = 0.42
Identities = 8/48 (16%), Positives = 19/48 (39%)
Query: 80 PSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSE 127
P VQ K +++ + + + LQ + ++++A E
Sbjct: 216 PVAVQGSKINLIYSRDHSVDESLDYMATWNMSMLQTQDIIKSVQAAME 263
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId:
9606]}
Length = 497
Score = 26.7 bits (58), Expect = 1.4
Identities = 14/128 (10%), Positives = 39/128 (30%), Gaps = 9/128 (7%)
Query: 7 LSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDVRNQEMNDMNRGDPFANLFSDPNIFVQ 66
+ ++ Y++ L D K+ +D+ N N+ + +
Sbjct: 30 WTSRQALQDL---YQKMLVTDLEYALDKKVEQDLWNHAFK--NQITTLQGQAKNRANPNR 84
Query: 67 LQLDPRTKPFLSD--PSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEA 124
++ FL Y Q+++E+ ++ G + + + ++
Sbjct: 85 SEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVK--SSQLGIISNKQTHTSAIVKP 142
Query: 125 YSEAIKLD 132
S +
Sbjct: 143 QSSSCSYI 150
Score = 25.9 bits (56), Expect = 2.3
Identities = 5/63 (7%), Positives = 18/63 (28%)
Query: 6 CLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDVRNQEMNDMNRGDPFANLFSDPNIFV 65
S G + +I Y + + ++ ++ + + + F+
Sbjct: 195 LASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTKWGVSDFIKAFI 254
Query: 66 QLQ 68
+
Sbjct: 255 KFH 257
>d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId:
9606]}
Length = 266
Score = 26.3 bits (56), Expect = 1.6
Identities = 6/48 (12%), Positives = 18/48 (37%)
Query: 80 PSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSE 127
P +++ K + L +++ + + + E + A+ E
Sbjct: 210 PVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKE 257
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase
alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 315
Score = 26.1 bits (56), Expect = 2.0
Identities = 6/40 (15%), Positives = 15/40 (37%)
Query: 109 GNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAK 148
+ + A + +AI+L+ N+ ++ R
Sbjct: 50 RAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKS 89
>d1wr0a1 a.7.14.1 (A:5-81) Vacuolar sorting protein 4b (VPS4B,
SKD1 protein) {Human (Homo sapiens) [TaxId: 9606]}
Length = 77
Score = 24.4 bits (53), Expect = 2.6
Identities = 7/43 (16%), Positives = 21/43 (48%), Gaps = 7/43 (16%)
Query: 11 GRYKESISTYEEGL-------KLDPNNEQMKEAIKDVRNQEMN 46
G Y+E++ Y+ + K + ++ K++I+ + ++
Sbjct: 25 GNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLD 67
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 124
Score = 25.1 bits (55), Expect = 2.6
Identities = 7/35 (20%), Positives = 15/35 (42%)
Query: 9 YLGRYKESISTYEEGLKLDPNNEQMKEAIKDVRNQ 43
LG Y + + + + NN+Q+ V ++
Sbjct: 85 KLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDK 119
>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas
sp., strain CBS-3 [TaxId: 306]}
Length = 269
Score = 25.5 bits (54), Expect = 3.2
Identities = 6/48 (12%), Positives = 14/48 (29%)
Query: 80 PSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSE 127
M KE + +E A++ +F + + +
Sbjct: 207 THLQVMAKERFHAGWMQPVEECTEFEIQNVIASVTHPHFMPCLTRFLD 254
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 290
Score = 25.3 bits (54), Expect = 3.2
Identities = 14/161 (8%), Positives = 35/161 (21%), Gaps = 16/161 (9%)
Query: 5 SCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDVRN------------QEMNDMNRGD 52
+ + ++ + EA ++ +
Sbjct: 45 TIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAI 104
Query: 53 PFANLFSDPNIFVQLQLDPRTKPFLSDPSYVQMIKEIQKDPSLMTLEAKISLLKD----K 108
+ + Y + I + + ++L
Sbjct: 105 QIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKC 164
Query: 109 GNAALQANNFKEAIEAYSEAIKLDGTNHILFSNRSAAFAKA 149
+ + EA + YS+ IK N + + F K
Sbjct: 165 ADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKK 205
Score = 25.3 bits (54), Expect = 3.6
Identities = 7/38 (18%), Positives = 16/38 (42%)
Query: 10 LGRYKESISTYEEGLKLDPNNEQMKEAIKDVRNQEMND 47
+ E ++ ++LD + IK+ Q+ +D
Sbjct: 253 SEQLSEHCKEFDNFMRLDKWKITILNKIKESIQQQEDD 290
Score = 25.3 bits (54), Expect = 3.7
Identities = 4/33 (12%), Positives = 8/33 (24%)
Query: 99 EAKISLLKDKGNAALQANNFKEAIEAYSEAIKL 131
E L A +++ +A
Sbjct: 34 EEAADLCVQAATIYRLRKELNLAGDSFLKAADY 66
>d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase
(delta3-delta2-enoyl-CoA isomerase) {Human (Homo
sapiens), mitochondrial [TaxId: 9606]}
Length = 249
Score = 25.2 bits (53), Expect = 3.3
Identities = 3/44 (6%), Positives = 17/44 (38%)
Query: 80 PSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIE 123
Q+ K + + + L + + + ++ +++++
Sbjct: 205 DHARQLTKAMMRKATASRLVTQRDADVQNFVSFISKDSIQKSLQ 248
>d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 258
Score = 25.2 bits (53), Expect = 3.4
Identities = 6/46 (13%), Positives = 15/46 (32%)
Query: 82 YVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSE 127
++ K + + + LE + + E++ Y E
Sbjct: 207 VLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVE 252
>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus
thermophilus [TaxId: 274]}
Length = 253
Score = 25.0 bits (53), Expect = 3.6
Identities = 10/46 (21%), Positives = 17/46 (36%)
Query: 82 YVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSE 127
+++ KE+ M LE L + + E I A+ E
Sbjct: 202 SLRLTKELLLALPGMGLEDGFRLAALANAWVRETGDLAEGIRAFFE 247
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 122
Score = 24.7 bits (53), Expect = 3.8
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 6 CLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDVRNQEMND 47
L Y++++ L+ +P N Q KE + + D
Sbjct: 81 GNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKKD 122
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 159
Score = 24.6 bits (52), Expect = 4.1
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 105 LKDKGNAALQANNFKEAIEAYS 126
LK + N +A +++ AI+ YS
Sbjct: 13 LKTQANDYFKAKDYENAIKFYS 34
Score = 24.6 bits (52), Expect = 4.3
Identities = 7/41 (17%), Positives = 20/41 (48%)
Query: 1 MTTYSCLSYLGRYKESISTYEEGLKLDPNNEQMKEAIKDVR 41
+ LG+++ ++ YE +K+ P+++ K ++
Sbjct: 82 YRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECN 122
>d1eexg_ a.23.2.1 (G:) Diol dehydratase, gamma subunit {Klebsiella
oxytoca [TaxId: 571]}
Length = 137
Score = 24.7 bits (54), Expect = 4.3
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 105 LKDKGNAALQANNFKEAIEAYSEAIKLDGTN 135
L+ + A + A +EA Y E KL G +
Sbjct: 107 LESRYQAKICAAFVREAATLYVERKKLKGDD 137
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III
{Escherichia coli [TaxId: 562]}
Length = 366
Score = 24.9 bits (52), Expect = 5.3
Identities = 6/23 (26%), Positives = 9/23 (39%)
Query: 109 GNAALQANNFKEAIEAYSEAIKL 131
QA +A +A+KL
Sbjct: 298 NQLYWQAGRKSDAQRVLLDALKL 320
Score = 24.1 bits (50), Expect = 9.3
Identities = 4/28 (14%), Positives = 8/28 (28%)
Query: 10 LGRYKESISTYEEGLKLDPNNEQMKEAI 37
G E+ + L+ P +
Sbjct: 25 DGNPDEAERLAKLALEELPPGWFYSRIV 52
>d1rwha1 a.102.3.2 (A:4-372) Chondroitinase AC {Arthrobacter
aurescens [TaxId: 43663]}
Length = 369
Score = 24.5 bits (53), Expect = 6.0
Identities = 7/52 (13%), Positives = 21/52 (40%), Gaps = 6/52 (11%)
Query: 12 RYKESISTYEEGLKLDPNNEQMKEAIKDVRNQE---MNDMNRGDPFANLFSD 60
R+ + I+ + + +AI + N+ + ++ ++F+D
Sbjct: 12 RWVDQITGRN---VIQAGDPDFAKAITALNNKAADSLAKLDAAAGRTSVFTD 60
>d1pbua_ d.58.46.1 (A:) Elongation factor 1-gamma C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 162
Score = 23.9 bits (52), Expect = 6.9
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 25 KLDPNNEQMKEAIKDVRNQEMNDMNRGDPFA 55
KLDP +E+ + +++ + E + G F
Sbjct: 126 KLDPGSEETQTLVREYFSWEGAFQHVGKAFN 156
>d1ghca_ a.4.5.13 (A:) Histone H1, globular domain {Chicken (Gallus
gallus) [TaxId: 9031]}
Length = 75
Score = 23.2 bits (50), Expect = 7.5
Identities = 10/49 (20%), Positives = 21/49 (42%), Gaps = 14/49 (28%)
Query: 77 LSDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAY 125
++ PS ++I + +S K++ +L A K+A+ A
Sbjct: 1 MAGPSVTELITKA------------VSASKERKGLSLAAL--KKALAAG 35
>d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 93
Score = 23.3 bits (50), Expect = 7.8
Identities = 6/42 (14%), Positives = 18/42 (42%), Gaps = 6/42 (14%)
Query: 11 GRYKESISTYEEGLKL------DPNNEQMKEAIKDVRNQEMN 46
RY++++ Y+EG+ + + ++ + M+
Sbjct: 29 SRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMD 70
Score = 23.3 bits (50), Expect = 9.2
Identities = 7/35 (20%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 97 TLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKL 131
A +++LK + + +++A+ Y E I +
Sbjct: 11 DSTAAVAVLK-RAVELDAESRYQQALVCYQEGIDM 44
>d1s0pa_ a.192.1.1 (A:) N-terminal domain of adenylylcyclase
associated protein, CAP {Dictyostelium discoideum
[TaxId: 44689]}
Length = 176
Score = 23.9 bits (52), Expect = 9.2
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 28 PNNEQMKEAIKDVRN-----QEMNDMNRGDPFAN 56
P+ E + E IK + N ++ D NR F N
Sbjct: 54 PSQETLLELIKPLNNFAAEVGKIRDSNRSSKFFN 87
>d1hsta_ a.4.5.13 (A:) Histone H5, globular domain {Chicken (Gallus
gallus) [TaxId: 9031]}
Length = 74
Score = 22.8 bits (49), Expect = 9.8
Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 24/73 (32%)
Query: 78 SDPSYVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSEAIKLDGTNHI 137
S P+Y +MI I K +G ++ Q +I+ Y ++ ++
Sbjct: 1 SHPTYSEMIAAA------------IRAEKSRGGSSRQ------SIQKYIKS------HYK 36
Query: 138 LFSNRSAAFAKAI 150
+ N +I
Sbjct: 37 VGHNADLQIKLSI 49
>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 260
Score = 24.0 bits (51), Expect = 9.8
Identities = 12/46 (26%), Positives = 18/46 (39%)
Query: 82 YVQMIKEIQKDPSLMTLEAKISLLKDKGNAALQANNFKEAIEAYSE 127
V M KE MTL L K + ++ +E + A+ E
Sbjct: 206 IVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVE 251
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.130 0.358
Gapped
Lambda K H
0.267 0.0643 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 524,506
Number of extensions: 22824
Number of successful extensions: 162
Number of sequences better than 10.0: 1
Number of HSP's gapped: 153
Number of HSP's successfully gapped: 91
Length of query: 150
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 72
Effective length of database: 1,336,656
Effective search space: 96239232
Effective search space used: 96239232
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 49 (22.8 bits)