Query psy3027
Match_columns 300
No_of_seqs 174 out of 866
Neff 7.6
Searched_HMMs 46136
Date Fri Aug 16 23:39:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3027.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3027hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1221|consensus 100.0 2.6E-76 5.7E-81 564.0 15.7 266 1-270 200-467 (467)
2 PLN02503 fatty acyl-CoA reduct 100.0 1E-59 2.2E-64 468.1 19.6 247 1-257 342-604 (605)
3 PLN02996 fatty acyl-CoA reduct 100.0 1.2E-55 2.6E-60 433.6 21.7 248 2-255 229-491 (491)
4 PF03015 Sterile: Male sterili 100.0 9.9E-31 2.1E-35 202.2 9.3 94 163-256 1-94 (94)
5 cd09071 FAR_C C-terminal domai 99.9 5.4E-27 1.2E-31 180.4 8.3 91 164-254 2-92 (92)
6 PF07993 NAD_binding_4: Male s 99.5 2.9E-15 6.2E-20 135.1 4.5 83 3-88 162-247 (249)
7 PRK07201 short chain dehydroge 99.3 1.5E-10 3.2E-15 117.8 16.4 116 5-134 147-268 (657)
8 PF01073 3Beta_HSD: 3-beta hyd 98.9 4E-09 8.6E-14 97.0 9.1 118 5-134 142-269 (280)
9 COG3320 Putative dehydrogenase 98.9 3.2E-09 6.9E-14 99.6 5.9 120 3-131 162-289 (382)
10 KOG1430|consensus 98.8 7.3E-08 1.6E-12 91.0 13.1 190 4-247 148-343 (361)
11 PLN02427 UDP-apiose/xylose syn 98.7 4.3E-08 9.4E-13 93.7 8.4 120 7-134 180-307 (386)
12 TIGR01746 Thioester-redct thio 98.7 6.1E-08 1.3E-12 90.6 8.1 113 5-131 161-277 (367)
13 PRK15181 Vi polysaccharide bio 98.6 1.1E-07 2.4E-12 89.8 8.8 116 7-134 163-283 (348)
14 PRK10217 dTDP-glucose 4,6-dehy 98.6 9.7E-08 2.1E-12 89.9 8.3 110 7-134 158-271 (355)
15 TIGR01181 dTDP_gluc_dehyt dTDP 98.6 1.5E-07 3.2E-12 86.4 7.9 110 7-134 148-261 (317)
16 PRK11150 rfaD ADP-L-glycero-D- 98.5 2.3E-07 5.1E-12 85.6 8.3 112 7-134 138-255 (308)
17 PRK10084 dTDP-glucose 4,6 dehy 98.5 3.3E-07 7.1E-12 86.2 8.4 109 7-134 165-278 (352)
18 TIGR01214 rmlD dTDP-4-dehydror 98.5 3.3E-07 7.2E-12 83.5 7.5 107 6-134 121-229 (287)
19 PRK11908 NAD-dependent epimera 98.5 6.3E-07 1.4E-11 84.3 9.6 124 7-138 147-275 (347)
20 PLN02260 probable rhamnose bio 98.5 3.9E-07 8.4E-12 93.4 8.1 110 7-134 157-270 (668)
21 TIGR03443 alpha_am_amid L-amin 98.4 4.5E-07 9.8E-12 99.8 8.6 115 5-134 1146-1264(1389)
22 TIGR01179 galE UDP-glucose-4-e 98.4 5.5E-07 1.2E-11 82.9 7.7 120 7-134 143-276 (328)
23 PLN02166 dTDP-glucose 4,6-dehy 98.4 5.6E-07 1.2E-11 87.8 7.7 111 7-134 261-375 (436)
24 TIGR02197 heptose_epim ADP-L-g 98.4 1.4E-06 2.9E-11 80.3 9.2 113 6-134 135-260 (314)
25 COG0451 WcaG Nucleoside-diphos 98.4 1.1E-06 2.5E-11 80.5 8.4 111 8-134 141-257 (314)
26 PLN02206 UDP-glucuronate decar 98.4 9.7E-07 2.1E-11 86.3 8.0 111 7-134 260-374 (442)
27 PLN02214 cinnamoyl-CoA reducta 98.3 1.7E-06 3.8E-11 81.5 9.0 107 7-134 159-269 (342)
28 PRK08125 bifunctional UDP-gluc 98.3 1.7E-06 3.6E-11 88.7 8.8 121 7-134 461-586 (660)
29 PLN02725 GDP-4-keto-6-deoxyman 98.3 1.6E-06 3.4E-11 79.5 7.5 113 8-134 129-250 (306)
30 PLN02572 UDP-sulfoquinovose sy 98.3 1.2E-06 2.6E-11 85.6 6.7 117 7-132 226-356 (442)
31 PLN02695 GDP-D-mannose-3',5'-e 98.2 3.2E-06 7E-11 80.6 8.2 112 7-134 165-282 (370)
32 PLN02662 cinnamyl-alcohol dehy 98.2 6.1E-06 1.3E-10 76.4 8.7 106 7-134 160-269 (322)
33 PLN02986 cinnamyl-alcohol dehy 98.2 6E-06 1.3E-10 76.7 8.2 106 7-134 161-270 (322)
34 PLN02989 cinnamyl-alcohol dehy 98.2 6.2E-06 1.3E-10 76.7 8.0 106 7-134 162-271 (325)
35 PLN00198 anthocyanidin reducta 98.1 8.5E-06 1.8E-10 76.3 8.2 110 7-134 166-284 (338)
36 TIGR02622 CDP_4_6_dhtase CDP-g 98.1 7.8E-06 1.7E-10 77.0 7.0 117 7-134 150-277 (349)
37 TIGR03466 HpnA hopanoid-associ 98.1 3.7E-05 7.9E-10 71.0 11.2 106 7-134 139-248 (328)
38 PLN02240 UDP-glucose 4-epimera 98.0 1.5E-05 3.2E-10 74.8 8.0 123 6-134 153-290 (352)
39 COG1087 GalE UDP-glucose 4-epi 98.0 1.7E-05 3.6E-10 72.8 7.8 132 7-146 140-284 (329)
40 PF01370 Epimerase: NAD depend 98.0 5.9E-06 1.3E-10 72.6 4.8 95 7-114 138-236 (236)
41 PLN02650 dihydroflavonol-4-red 98.0 2.3E-05 5E-10 73.8 8.5 106 7-134 161-272 (351)
42 KOG0747|consensus 98.0 1.4E-05 3.1E-10 72.6 6.4 115 6-138 154-272 (331)
43 PRK09987 dTDP-4-dehydrorhamnos 98.0 2.2E-05 4.8E-10 72.6 7.9 105 7-133 126-234 (299)
44 PF04321 RmlD_sub_bind: RmlD s 98.0 4E-06 8.6E-11 77.3 2.8 111 7-138 123-235 (286)
45 PLN02583 cinnamoyl-CoA reducta 97.9 2.4E-05 5.1E-10 72.2 7.5 103 8-139 162-268 (297)
46 PRK10675 UDP-galactose-4-epime 97.9 3.5E-05 7.5E-10 71.9 8.4 121 6-134 146-281 (338)
47 TIGR01472 gmd GDP-mannose 4,6- 97.9 2.2E-05 4.8E-10 73.7 7.1 110 7-134 154-270 (343)
48 PLN00016 RNA-binding protein; 97.9 3.7E-05 8E-10 73.4 8.7 103 12-134 188-292 (378)
49 PLN02686 cinnamoyl-CoA reducta 97.9 3.3E-05 7.1E-10 73.7 7.9 107 7-134 214-324 (367)
50 CHL00194 ycf39 Ycf39; Provisio 97.8 0.00019 4.2E-09 66.7 11.5 102 7-134 119-222 (317)
51 TIGR01777 yfcH conserved hypot 97.8 8.2E-05 1.8E-09 67.5 8.3 105 8-134 135-242 (292)
52 PLN02896 cinnamyl-alcohol dehy 97.7 6.7E-05 1.5E-09 70.8 6.9 108 8-134 175-292 (353)
53 PLN02653 GDP-mannose 4,6-dehyd 97.6 0.00017 3.8E-09 67.5 7.7 109 6-134 159-276 (340)
54 KOG1502|consensus 97.6 0.00028 6.2E-09 65.8 8.9 111 7-139 162-276 (327)
55 PLN02657 3,8-divinyl protochlo 97.6 0.00016 3.5E-09 69.6 6.9 105 7-134 190-297 (390)
56 COG1088 RfbB dTDP-D-glucose 4, 97.6 0.00017 3.6E-09 66.2 6.3 114 7-138 150-267 (340)
57 PLN02778 3,5-epimerase/4-reduc 97.4 0.0005 1.1E-08 63.6 7.4 98 7-134 139-238 (298)
58 COG1091 RfbD dTDP-4-dehydrorha 97.4 0.00028 6.1E-09 64.7 5.6 103 7-134 122-227 (281)
59 TIGR03589 PseB UDP-N-acetylglu 97.3 0.0006 1.3E-08 63.8 7.4 103 7-132 133-243 (324)
60 PRK05865 hypothetical protein; 97.1 0.0013 2.8E-08 69.1 7.6 93 13-131 106-200 (854)
61 KOG2865|consensus 96.6 0.0047 1E-07 56.6 5.9 111 6-138 185-297 (391)
62 PTZ00374 dihydroxyacetone phos 96.4 0.0054 1.2E-07 64.5 6.1 76 58-134 236-315 (1108)
63 PLN02260 probable rhamnose bio 95.9 0.018 4E-07 59.1 7.0 97 7-133 510-608 (668)
64 TIGR03649 ergot_EASG ergot alk 95.0 0.052 1.1E-06 49.4 6.0 99 12-134 114-214 (285)
65 PLN00141 Tic62-NAD(P)-related 94.7 0.078 1.7E-06 47.4 6.2 87 11-129 159-247 (251)
66 COG1090 Predicted nucleoside-d 94.6 0.11 2.3E-06 47.6 6.6 87 25-134 151-240 (297)
67 PRK12320 hypothetical protein; 94.1 0.096 2.1E-06 54.2 6.0 89 15-132 112-202 (699)
68 PF13460 NAD_binding_10: NADH( 93.2 0.1 2.2E-06 43.9 3.7 63 7-93 118-181 (183)
69 KOG1371|consensus 93.1 0.27 5.8E-06 46.0 6.5 125 7-140 151-290 (343)
70 PRK09135 pteridine reductase; 93.0 0.18 3.8E-06 44.3 5.2 36 7-42 154-193 (249)
71 KOG1429|consensus 92.5 0.4 8.8E-06 44.2 6.8 111 7-134 168-282 (350)
72 PF02719 Polysacc_synt_2: Poly 92.2 0.15 3.2E-06 47.3 3.6 107 6-134 135-248 (293)
73 PF05368 NmrA: NmrA-like famil 91.8 0.23 4.9E-06 43.7 4.4 110 4-134 113-226 (233)
74 KOG4288|consensus 91.7 0.16 3.4E-06 45.4 3.0 86 5-93 171-260 (283)
75 COG1086 Predicted nucleoside-d 91.3 0.95 2.1E-05 45.4 8.3 113 6-141 383-502 (588)
76 PRK06482 short chain dehydroge 91.1 0.41 8.9E-06 43.1 5.3 33 7-39 146-183 (276)
77 PRK12829 short chain dehydroge 86.3 0.43 9.4E-06 42.3 1.9 35 8-42 159-198 (264)
78 TIGR01963 PHB_DH 3-hydroxybuty 86.0 0.75 1.6E-05 40.5 3.3 97 7-116 148-251 (255)
79 PRK05875 short chain dehydroge 84.9 1.2 2.6E-05 39.9 4.2 35 5-39 155-194 (276)
80 PRK06914 short chain dehydroge 84.8 0.5 1.1E-05 42.5 1.6 36 6-41 150-190 (280)
81 PRK12746 short chain dehydroge 81.1 0.99 2.1E-05 39.8 2.0 35 7-41 158-197 (254)
82 PRK13394 3-hydroxybutyrate deh 80.8 0.65 1.4E-05 41.1 0.7 96 7-116 155-258 (262)
83 PRK07067 sorbitol dehydrogenas 80.1 1 2.2E-05 39.9 1.8 35 7-41 151-190 (257)
84 COG0702 Predicted nucleoside-d 80.0 8.9 0.00019 33.9 7.9 103 6-134 115-219 (275)
85 PRK08263 short chain dehydroge 79.2 2.9 6.3E-05 37.6 4.5 35 7-41 147-186 (275)
86 KOG3019|consensus 78.2 5 0.00011 36.1 5.4 90 23-134 168-259 (315)
87 PRK07074 short chain dehydroge 75.0 5.4 0.00012 35.2 4.9 99 8-129 147-251 (257)
88 PRK08063 enoyl-(acyl carrier p 74.1 2.7 5.9E-05 36.8 2.7 35 7-41 152-191 (250)
89 PRK06077 fabG 3-ketoacyl-(acyl 73.4 3 6.5E-05 36.5 2.9 88 7-116 152-244 (252)
90 PRK12745 3-ketoacyl-(acyl-carr 72.7 3.2 6.9E-05 36.6 2.8 36 6-41 157-197 (256)
91 PRK05876 short chain dehydroge 72.2 3.3 7E-05 37.5 2.8 34 7-40 154-192 (275)
92 PRK12825 fabG 3-ketoacyl-(acyl 71.7 3.3 7.1E-05 35.9 2.7 36 7-42 154-194 (249)
93 PRK06180 short chain dehydroge 68.7 4.4 9.6E-05 36.4 2.9 35 7-41 148-187 (277)
94 PRK08264 short chain dehydroge 68.5 5.1 0.00011 34.8 3.2 34 6-39 143-181 (238)
95 PRK06138 short chain dehydroge 67.4 4.4 9.4E-05 35.5 2.5 38 6-43 150-192 (252)
96 PRK06949 short chain dehydroge 67.1 5.4 0.00012 35.1 3.1 36 6-41 163-203 (258)
97 PRK06123 short chain dehydroge 66.9 4 8.6E-05 35.7 2.2 34 8-41 156-194 (248)
98 KOG2762|consensus 66.4 20 0.00044 34.2 6.7 52 232-283 49-127 (429)
99 PRK07775 short chain dehydroge 66.2 4.9 0.00011 36.1 2.7 33 7-39 157-194 (274)
100 PRK12826 3-ketoacyl-(acyl-carr 65.7 5.6 0.00012 34.7 2.9 35 7-41 154-193 (251)
101 PRK09730 putative NAD(P)-bindi 65.5 5.1 0.00011 34.9 2.6 35 7-41 154-193 (247)
102 PRK12827 short chain dehydroge 65.0 5.7 0.00012 34.6 2.8 37 6-42 157-198 (249)
103 PRK06500 short chain dehydroge 64.9 4.8 0.0001 35.2 2.3 35 6-40 147-186 (249)
104 PRK07060 short chain dehydroge 64.0 5.4 0.00012 34.7 2.4 36 6-41 147-187 (245)
105 PRK12744 short chain dehydroge 61.8 7.7 0.00017 34.3 3.0 37 5-41 155-196 (257)
106 PRK06101 short chain dehydroge 61.4 9.5 0.00021 33.4 3.5 34 7-40 139-177 (240)
107 PRK08324 short chain dehydroge 61.2 16 0.00034 37.9 5.6 32 7-38 569-605 (681)
108 PF05208 ALG3: ALG3 protein; 60.6 36 0.00079 32.6 7.4 51 233-283 22-99 (368)
109 PRK09291 short chain dehydroge 60.4 9 0.00019 33.6 3.2 34 6-39 142-180 (257)
110 PRK07890 short chain dehydroge 58.2 7.7 0.00017 34.1 2.4 35 7-41 152-191 (258)
111 PRK07454 short chain dehydroge 57.9 13 0.00029 32.2 3.9 34 6-39 152-190 (241)
112 PRK06182 short chain dehydroge 56.8 13 0.00028 33.2 3.6 34 6-39 143-181 (273)
113 PRK07666 fabG 3-ketoacyl-(acyl 56.7 14 0.00029 32.2 3.7 37 6-42 153-194 (239)
114 PRK12384 sorbitol-6-phosphate 56.7 10 0.00022 33.4 3.0 33 7-39 152-189 (259)
115 PRK07806 short chain dehydroge 55.9 13 0.00028 32.4 3.5 86 7-116 151-242 (248)
116 PRK05786 fabG 3-ketoacyl-(acyl 55.6 11 0.00024 32.6 2.9 34 7-40 148-186 (238)
117 TIGR03206 benzo_BadH 2-hydroxy 54.9 11 0.00024 32.9 2.8 36 6-41 149-189 (250)
118 PRK07024 short chain dehydroge 54.8 12 0.00026 33.0 3.1 33 7-39 149-186 (257)
119 PRK07453 protochlorophyllide o 54.7 12 0.00025 34.6 3.1 34 7-40 191-230 (322)
120 PRK12823 benD 1,6-dihydroxycyc 54.4 14 0.00031 32.5 3.5 35 6-40 152-191 (260)
121 PRK05557 fabG 3-ketoacyl-(acyl 54.3 13 0.00028 32.2 3.1 34 6-39 152-190 (248)
122 PRK06179 short chain dehydroge 54.3 17 0.00037 32.2 4.0 36 7-42 143-183 (270)
123 PRK07774 short chain dehydroge 53.8 14 0.00031 32.2 3.3 35 6-40 152-191 (250)
124 PRK05993 short chain dehydroge 53.7 14 0.00031 33.1 3.5 35 6-40 145-184 (277)
125 PF11084 DUF2621: Protein of u 53.0 44 0.00096 27.1 5.6 62 214-281 29-94 (141)
126 PRK05653 fabG 3-ketoacyl-(acyl 53.0 10 0.00022 32.8 2.2 35 7-41 152-191 (246)
127 PRK06947 glucose-1-dehydrogena 52.3 9.5 0.00021 33.3 2.0 33 7-39 155-192 (248)
128 PRK08217 fabG 3-ketoacyl-(acyl 52.0 14 0.00031 32.1 3.1 37 6-42 160-201 (253)
129 PRK12935 acetoacetyl-CoA reduc 51.1 11 0.00024 32.9 2.2 33 7-39 154-191 (247)
130 PRK08220 2,3-dihydroxybenzoate 50.9 13 0.00029 32.4 2.7 35 7-41 146-185 (252)
131 PRK12742 oxidoreductase; Provi 50.4 14 0.0003 32.0 2.7 35 6-40 143-182 (237)
132 PRK08017 oxidoreductase; Provi 50.2 19 0.0004 31.6 3.5 33 7-39 144-181 (256)
133 PRK06057 short chain dehydroge 50.0 16 0.00034 32.3 3.0 34 7-40 152-190 (255)
134 PRK06523 short chain dehydroge 49.8 16 0.00036 32.1 3.1 35 6-40 149-188 (260)
135 PRK10538 malonic semialdehyde 49.5 23 0.0005 31.1 4.0 34 7-40 145-183 (248)
136 PRK06196 oxidoreductase; Provi 49.1 19 0.00041 33.1 3.5 35 7-41 179-218 (315)
137 PRK05717 oxidoreductase; Valid 48.8 19 0.00041 31.7 3.3 35 6-40 154-192 (255)
138 PRK08628 short chain dehydroge 48.5 14 0.0003 32.5 2.5 36 6-41 150-190 (258)
139 TIGR01830 3oxo_ACP_reduc 3-oxo 48.4 16 0.00034 31.5 2.7 34 6-39 145-183 (239)
140 PRK07326 short chain dehydroge 48.1 24 0.00051 30.5 3.8 33 7-39 151-188 (237)
141 PRK07577 short chain dehydroge 47.8 18 0.00038 31.2 2.9 35 5-39 135-174 (234)
142 PRK08703 short chain dehydroge 46.8 17 0.00036 31.6 2.7 35 7-41 158-198 (239)
143 PRK08213 gluconate 5-dehydroge 45.0 22 0.00047 31.4 3.1 33 7-39 164-201 (259)
144 PRK06953 short chain dehydroge 44.6 34 0.00074 29.4 4.3 33 8-40 145-180 (222)
145 PRK07523 gluconate 5-dehydroge 44.0 19 0.00042 31.6 2.6 35 7-41 157-196 (255)
146 PRK09134 short chain dehydroge 43.5 27 0.00059 30.7 3.6 33 7-39 157-193 (258)
147 PRK12937 short chain dehydroge 43.5 22 0.00047 30.8 2.9 34 6-39 150-188 (245)
148 PRK08945 putative oxoacyl-(acy 43.0 22 0.00048 31.0 2.9 35 6-40 162-201 (247)
149 PLN03209 translocon at the inn 42.4 35 0.00076 34.8 4.4 30 8-39 226-255 (576)
150 PLN02253 xanthoxin dehydrogena 42.4 21 0.00046 31.9 2.7 37 5-41 164-205 (280)
151 PRK12939 short chain dehydroge 42.1 23 0.00049 30.8 2.8 34 7-40 154-192 (250)
152 PRK06935 2-deoxy-D-gluconate 3 41.4 31 0.00067 30.4 3.6 35 7-41 161-200 (258)
153 PRK12824 acetoacetyl-CoA reduc 40.8 23 0.00049 30.7 2.5 34 8-41 151-189 (245)
154 PRK12748 3-ketoacyl-(acyl-carr 40.7 26 0.00056 30.8 2.9 33 7-39 165-202 (256)
155 TIGR02415 23BDH acetoin reduct 39.9 28 0.0006 30.4 3.0 33 7-39 148-185 (254)
156 PRK08642 fabG 3-ketoacyl-(acyl 39.7 30 0.00064 30.1 3.2 33 7-39 157-194 (253)
157 TIGR01831 fabG_rel 3-oxoacyl-( 39.5 21 0.00046 30.9 2.2 35 7-41 147-186 (239)
158 PRK08251 short chain dehydroge 39.5 31 0.00068 30.0 3.3 33 7-39 152-189 (248)
159 PRK07035 short chain dehydroge 39.4 27 0.00058 30.6 2.8 34 7-40 156-194 (252)
160 TIGR02685 pter_reduc_Leis pter 39.0 20 0.00043 31.9 1.9 32 7-38 171-207 (267)
161 PRK06181 short chain dehydroge 39.0 33 0.00071 30.2 3.3 35 7-41 148-187 (263)
162 PRK12428 3-alpha-hydroxysteroi 38.7 32 0.00068 30.2 3.2 34 7-40 135-174 (241)
163 PRK12828 short chain dehydroge 38.2 27 0.00058 30.0 2.6 34 7-40 152-190 (239)
164 PRK08267 short chain dehydroge 38.2 35 0.00076 30.0 3.4 34 7-40 147-185 (260)
165 PRK12747 short chain dehydroge 38.1 33 0.00071 30.0 3.2 34 7-40 156-194 (252)
166 PRK07023 short chain dehydroge 37.7 36 0.00077 29.6 3.3 33 7-39 148-184 (243)
167 PRK06550 fabG 3-ketoacyl-(acyl 37.5 28 0.00062 30.0 2.7 36 6-41 137-177 (235)
168 PRK09186 flagellin modificatio 37.1 36 0.00078 29.7 3.3 32 7-38 166-202 (256)
169 PRK05867 short chain dehydroge 36.8 31 0.00067 30.3 2.8 35 7-41 159-198 (253)
170 PRK05565 fabG 3-ketoacyl-(acyl 36.7 36 0.00079 29.3 3.2 34 7-40 153-191 (247)
171 PRK06128 oxidoreductase; Provi 36.4 28 0.0006 31.7 2.5 35 7-41 203-242 (300)
172 PRK08643 acetoin reductase; Va 36.2 34 0.00075 29.9 3.0 33 7-39 150-187 (256)
173 KOG1203|consensus 36.2 39 0.00084 33.0 3.5 31 4-36 209-245 (411)
174 PRK12429 3-hydroxybutyrate deh 35.5 35 0.00075 29.7 2.9 35 7-41 151-190 (258)
175 PRK05650 short chain dehydroge 35.3 49 0.0011 29.3 3.9 35 7-41 147-186 (270)
176 PRK08085 gluconate 5-dehydroge 34.8 38 0.00083 29.6 3.1 37 6-42 155-196 (254)
177 PRK12938 acetyacetyl-CoA reduc 34.5 40 0.00086 29.3 3.1 35 6-40 150-189 (246)
178 TIGR01832 kduD 2-deoxy-D-gluco 34.5 47 0.001 28.8 3.6 36 5-40 149-189 (248)
179 PRK07832 short chain dehydroge 33.5 51 0.0011 29.3 3.7 36 6-41 148-188 (272)
180 PRK08936 glucose-1-dehydrogena 32.8 36 0.00078 30.0 2.6 34 7-40 156-194 (261)
181 PRK08177 short chain dehydroge 32.5 73 0.0016 27.3 4.4 34 8-41 146-184 (225)
182 PRK07825 short chain dehydroge 31.9 51 0.0011 29.2 3.4 33 7-39 148-185 (273)
183 COG3945 Uncharacterized conser 31.9 38 0.00082 29.1 2.3 35 237-271 117-151 (189)
184 PRK06701 short chain dehydroge 31.5 33 0.00071 31.2 2.1 34 7-40 193-231 (290)
185 PRK07102 short chain dehydroge 31.4 82 0.0018 27.3 4.6 33 8-40 147-184 (243)
186 TIGR01829 AcAcCoA_reduct aceto 31.2 49 0.0011 28.5 3.1 36 6-41 147-187 (242)
187 PRK06172 short chain dehydroge 30.9 44 0.00096 29.1 2.8 36 7-42 155-195 (253)
188 PRK05866 short chain dehydroge 30.9 58 0.0013 29.6 3.7 34 7-40 190-228 (293)
189 PRK08993 2-deoxy-D-gluconate 3 30.2 46 0.00099 29.3 2.8 34 7-40 156-194 (253)
190 PRK05693 short chain dehydroge 30.1 64 0.0014 28.7 3.7 36 5-40 139-179 (274)
191 PRK06171 sorbitol-6-phosphate 29.9 54 0.0012 28.9 3.2 32 7-38 156-192 (266)
192 PRK06114 short chain dehydroge 29.8 52 0.0011 28.9 3.1 34 7-40 158-196 (254)
193 PRK07231 fabG 3-ketoacyl-(acyl 29.7 42 0.00091 29.0 2.5 34 7-40 152-190 (251)
194 PRK07831 short chain dehydroge 29.0 46 0.001 29.3 2.6 34 6-39 167-205 (262)
195 PF07914 DUF1679: Protein of u 28.9 1.5E+02 0.0034 28.8 6.4 48 217-272 314-363 (414)
196 PRK07985 oxidoreductase; Provi 28.6 54 0.0012 29.8 3.0 35 7-41 197-236 (294)
197 PRK07904 short chain dehydroge 27.8 67 0.0015 28.4 3.5 32 8-39 158-194 (253)
198 PRK12743 oxidoreductase; Provi 27.5 52 0.0011 28.9 2.6 34 7-40 151-189 (256)
199 PRK06483 dihydromonapterin red 26.9 82 0.0018 27.1 3.8 32 7-38 146-181 (236)
200 PRK01371 sec-independent trans 25.8 1.4E+02 0.003 24.5 4.6 75 176-268 17-91 (137)
201 PRK07097 gluconate 5-dehydroge 25.7 70 0.0015 28.2 3.2 38 6-43 156-198 (265)
202 PRK07677 short chain dehydroge 25.6 79 0.0017 27.6 3.5 33 7-39 149-187 (252)
203 PF00017 SH2: SH2 domain; Int 25.5 81 0.0018 22.2 2.9 23 12-35 7-29 (77)
204 PRK06463 fabG 3-ketoacyl-(acyl 25.4 64 0.0014 28.2 2.9 33 7-39 150-187 (255)
205 PF04272 Phospholamban: Phosph 25.3 2.1E+02 0.0045 18.8 4.9 16 257-272 17-32 (52)
206 PRK07814 short chain dehydroge 25.2 76 0.0016 28.0 3.3 34 6-39 157-194 (263)
207 KOG2774|consensus 25.2 1.4E+02 0.003 27.2 4.8 111 8-132 183-298 (366)
208 PF09889 DUF2116: Uncharacteri 24.8 91 0.002 21.7 2.9 18 261-278 28-45 (59)
209 PRK08277 D-mannonate oxidoredu 24.6 71 0.0015 28.4 3.0 35 7-41 172-211 (278)
210 PRK08226 short chain dehydroge 24.5 78 0.0017 27.8 3.2 35 7-41 153-192 (263)
211 PRK07478 short chain dehydroge 24.1 69 0.0015 28.0 2.8 33 7-39 155-192 (254)
212 PRK07856 short chain dehydroge 23.9 82 0.0018 27.5 3.3 34 6-39 145-182 (252)
213 PRK07041 short chain dehydroge 23.7 81 0.0018 26.9 3.1 34 6-39 134-170 (230)
214 PRK06198 short chain dehydroge 23.6 77 0.0017 27.7 3.0 35 6-40 154-193 (260)
215 TIGR01294 P_lamban phospholamb 23.5 2.2E+02 0.0049 18.7 4.9 17 257-273 17-33 (52)
216 PRK07576 short chain dehydroge 23.2 85 0.0018 27.8 3.2 33 7-39 155-192 (264)
217 PRK12859 3-ketoacyl-(acyl-carr 23.0 85 0.0018 27.6 3.2 34 6-39 165-203 (256)
218 PRK08589 short chain dehydroge 22.8 1E+02 0.0023 27.3 3.7 35 6-40 151-190 (272)
219 PF08452 DNAP_B_exo_N: DNA pol 22.7 26 0.00057 19.2 -0.1 10 231-240 1-10 (22)
220 PRK07063 short chain dehydroge 22.6 88 0.0019 27.4 3.2 34 7-40 156-194 (260)
221 KOG4039|consensus 22.6 59 0.0013 28.3 1.9 44 9-53 142-186 (238)
222 KOG4743|consensus 22.5 24 0.00053 30.6 -0.4 21 214-234 35-55 (195)
223 PRK12936 3-ketoacyl-(acyl-carr 22.3 73 0.0016 27.4 2.6 33 7-39 150-187 (245)
224 PRK06924 short chain dehydroge 22.2 67 0.0015 27.9 2.3 33 7-39 152-191 (251)
225 PRK06124 gluconate 5-dehydroge 21.7 76 0.0016 27.7 2.6 36 6-41 157-197 (256)
226 PRK08278 short chain dehydroge 21.5 98 0.0021 27.6 3.3 29 7-35 162-195 (273)
227 PF06956 RtcR: Regulator of RN 21.0 2.3E+02 0.005 24.4 5.1 57 117-174 78-138 (183)
228 PRK06194 hypothetical protein; 21.0 48 0.001 29.6 1.1 18 7-24 159-176 (287)
229 PHA02910 hypothetical protein; 20.2 54 0.0012 26.2 1.1 21 6-29 82-102 (171)
No 1
>KOG1221|consensus
Probab=100.00 E-value=2.6e-76 Score=563.96 Aligned_cols=266 Identities=41% Similarity=0.764 Sum_probs=257.5
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccce
Q psy3027 1 LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDM 80 (300)
Q Consensus 1 ll~~~pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~di 80 (300)
++++|||||||||++||++|.+++++||++|+|||||+++++||+|||+||++||+|++.++|+|++|.+.+|+++++|+
T Consensus 200 l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adi 279 (467)
T KOG1221|consen 200 LLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADI 279 (467)
T ss_pred hcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccce
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCCcccccccceeeeecchHHHH
Q psy3027 81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWPTIRAIWYFSFIPASNKYTYY 158 (300)
Q Consensus 81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P~~~~l~~P~~~~~~~~~~~~ 158 (300)
||||+||| +|+++|+++.+.+ +++ .+|||++||..||+||+++.+. .++.. ++|+++.+|+|.+.+++|.+.|.
T Consensus 280 IPvD~vvN~~ia~~~~~~~~~~--~~~-~~IY~~tss~~Np~t~~~~~e~~~~~~~-~~Pl~~~iw~P~~~~~sn~~~f~ 355 (467)
T KOG1221|consen 280 IPVDMVVNAMIASAWQHAGNSK--EKT-PPIYHLTSSNDNPVTWGDFIELALRYFE-KIPLEKMIWYPFGTLTSNPWLFN 355 (467)
T ss_pred eeHHHHHHHHHHHHHHHhccCC--CCC-CcEEEecccccCcccHHHHHHHHHHhcc-cCCcccceeccCceeeecHhHHH
Confidence 99999999 9999998876433 134 7899999999999999999999 99999 99999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHhcCCChHHHHHHHHHHhHHhhhhchhcceEEEechhHHHHHhcCCccccccccccCCCCCH
Q psy3027 159 ILSFFLHTIPGFILDSLASLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKW 238 (300)
Q Consensus 159 i~~~~~~~lPa~~~D~~~~l~G~kp~l~k~~~k~~~~~~~~~~f~~~~w~F~~~n~~~L~~~l~~~D~~~F~fD~~~idW 238 (300)
+..+++|++||+++|+++++.|+||.+.|+++|+.+..++++||+.++|+||++|+.+|++.|+++||+.|+||++++||
T Consensus 356 ~~~~~~h~lPa~~~d~~~~i~g~k~~~~k~~~ki~~~~~~l~~f~~~~w~Fd~~n~~~L~~~~~~~d~~~f~fd~~~ldW 435 (467)
T KOG1221|consen 356 LAAFLYHTLPAYILDLLLRLLGKKPRLVKLYRKIHKLVKLLEPFSLFKWIFDNKNTEKLREKMSEEDKRLFNFDMKQLDW 435 (467)
T ss_pred HHHHHHHHhhHHHHHHHHHHhCCChhhhHHHHHHHHHHHhhhhheeceEEecCccHHHHHHhCCHHHHhhcCCCcccCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCCCChHHHHHHHHH
Q psy3027 239 EYYAEAMGLGLRVYLVHDDIHTLPAARKKYQR 270 (300)
Q Consensus 239 ~~Y~~~~~~Girkyllke~~~~~~~a~~~~~~ 270 (300)
++|+.+|+.|+|+|++||+++++|+||++++|
T Consensus 436 ~ey~~~~i~G~r~~llKe~~e~l~~~r~~~kr 467 (467)
T KOG1221|consen 436 EEYFNRHLLGLRKYLLKESPESLPQARKRLKR 467 (467)
T ss_pred HHHHHHHHHHHHHHHhcCChhhhHHHHHhhcC
Confidence 99999999999999999999999999999874
No 2
>PLN02503 fatty acyl-CoA reductase 2
Probab=100.00 E-value=1e-59 Score=468.12 Aligned_cols=247 Identities=23% Similarity=0.351 Sum_probs=220.4
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccce
Q psy3027 1 LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDM 80 (300)
Q Consensus 1 ll~~~pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~di 80 (300)
++++||||||+||++||++|.++.++||++|+|||||+++++||+|||+||.++..+.+..+|+|+++.++++++..+|+
T Consensus 342 ~~~~~pNtYt~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~Di 421 (605)
T PLN02503 342 KLYGWQDTYVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDV 421 (605)
T ss_pred hhCCCCChHHHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeE
Confidence 46899999999999999999999999999999999999999999999999955544555556899999999999999999
Q ss_pred eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCCcccccccceeeeecchHHHH
Q psy3027 81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWPTIRAIWYFSFIPASNKYTYY 158 (300)
Q Consensus 81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P~~~~l~~P~~~~~~~~~~~~ 158 (300)
||||+||| +|+|++....... .+ ++|||||++..||+||+++.+. .+++. ++|+.+..|+|. ..+.+++.+.
T Consensus 422 VPVD~vvna~i~a~a~~~~~~~---~~-~~vYn~ts~~~nP~t~~~~~~~~~~~~~-~~P~~~~~~~~~-~~~~~~~~~~ 495 (605)
T PLN02503 422 VPADMVVNATLAAMAKHGGAAK---PE-INVYQIASSVVNPLVFQDLARLLYEHYK-SSPYMDSKGRPI-HVPPMKLFSS 495 (605)
T ss_pred EeecHHHHHHHHHHHhhhcccC---CC-CCEEEeCCCCCCCeEHHHHHHHHHHHHh-hCCcccccCcce-eccCceehhh
Confidence 99999999 8888554332111 34 7899999999999999999999 99999 999999999997 5688999999
Q ss_pred HHHHHHhhhhHHHHHHHHHhc-----CCChHHHHHHHHH--------HhHHhhhhchhcceEEEechhHHHHHhcCCccc
Q psy3027 159 ILSFFLHTIPGFILDSLASLS-----GRKPMLMAIYKKI--------DKASDTLEYFAHRQWVWTDHNVQALFNKLDPED 225 (300)
Q Consensus 159 i~~~~~~~lPa~~~D~~~~l~-----G~kp~l~k~~~k~--------~~~~~~~~~f~~~~w~F~~~n~~~L~~~l~~~D 225 (300)
+..++.|+ +.|.++++. |++|++.+.++|+ .+..++++||++++|+|+++|+++|++.|+++|
T Consensus 496 ~~~~~~h~----~~d~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ft~~~w~F~~~n~~~L~~~ms~~D 571 (605)
T PLN02503 496 MEDFSSHL----WRDALLRSGLAGMSSSDRKLSQKLENICAKSVEQAKYLASIYEPYTFYGGRFDNSNTQRLMERMSEEE 571 (605)
T ss_pred HHHHHHHH----HHHHHHHHhhhcccccChHHHHHHHHHHHHHHHHHHHHHHHHhhheeCeEEEechHHHHHHHhCCHHH
Confidence 99999885 688887764 4788888877644 448999999999999999999999999999999
Q ss_pred cccccccCCCCCHHHHHHH-HHHHHHHHHcCCC
Q psy3027 226 QELFFFDMGQMKWEYYAEA-MGLGLRVYLVHDD 257 (300)
Q Consensus 226 ~~~F~fD~~~idW~~Y~~~-~~~Girkyllke~ 257 (300)
|+.|+||++++||++|+++ |++|+|||++|+.
T Consensus 572 r~~F~~D~~~idW~~Y~~~~~i~G~rky~lk~~ 604 (605)
T PLN02503 572 KAEFGFDVGSIDWRDYITNVHIPGLRRHVMKGR 604 (605)
T ss_pred hhccCCCcCCCCHHHHHHHhhhhHHHHHHhccC
Confidence 9999999999999999997 9999999999984
No 3
>PLN02996 fatty acyl-CoA reductase
Probab=100.00 E-value=1.2e-55 Score=433.58 Aligned_cols=248 Identities=25% Similarity=0.371 Sum_probs=231.7
Q ss_pred CCCCCcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCccccee
Q psy3027 2 LHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMV 81 (300)
Q Consensus 2 l~~~pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diV 81 (300)
+++|||||++||++||+++.++.+++|++|+||++|+|+.++|+|||+|+++++.+++.++++|.++.++++++...|+|
T Consensus 229 ~~~~pn~Y~~TK~~aE~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v 308 (491)
T PLN02996 229 LHGWPNTYVFTKAMGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVI 308 (491)
T ss_pred hCCCCCchHhhHHHHHHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeeccee
Confidence 57899999999999999999988899999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCCcc----cccccceeeeecchH
Q psy3027 82 PSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWPTI----RAIWYFSFIPASNKY 155 (300)
Q Consensus 82 PVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P~~----~~l~~P~~~~~~~~~ 155 (300)
|||+||| +++++++... .. .. .+|||++|+..||+||+|+.+. .++++ ++|+. +.+|+|.++++++.+
T Consensus 309 ~Vddvv~a~l~a~~~~~~-~~---~~-~~vYNi~s~~~~~~s~~ei~~~~~~~~~-~~p~~~~~~~~~~~p~~~~~~~~~ 382 (491)
T PLN02996 309 PADMVVNAMIVAMAAHAG-GQ---GS-EIIYHVGSSLKNPVKFSNLHDFAYRYFS-KNPWINKEGSPVKVGKGTILSTMA 382 (491)
T ss_pred cccHHHHHHHHHHHHhhc-cC---CC-CcEEEecCCCCCcccHHHHHHHHHHHhh-hCCCcCCCCCeEeeCCceecCcHH
Confidence 9999999 9998876421 01 23 5799999999999999999999 99999 99998 599999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHH--hcCCChHHHHHHHHH---HhHHhhhhchhcceEEEechhHHHHHhcCCccc---cc
Q psy3027 156 TYYILSFFLHTIPGFILDSLAS--LSGRKPMLMAIYKKI---DKASDTLEYFAHRQWVWTDHNVQALFNKLDPED---QE 227 (300)
Q Consensus 156 ~~~i~~~~~~~lPa~~~D~~~~--l~G~kp~l~k~~~k~---~~~~~~~~~f~~~~w~F~~~n~~~L~~~l~~~D---~~ 227 (300)
.|.+..++.|.+|++++|++.. +.|+||++.|+++|+ ++.+++++||++++|+|+++|+++|++.|+++| |+
T Consensus 383 ~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~w~f~~~n~~~l~~~~~~~d~~d~~ 462 (491)
T PLN02996 383 SFSLYMTIRYLLPLKALQLVNIILPKRYGDKYTDLNRKIKLVMRLVDLYKPYVFFKGIFDDTNTEKLRIKRKETGKEEAD 462 (491)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHHHHHhhccccceEEEccHHHHHHHHHCCcccccccc
Confidence 9999999999999999999988 678999999999999 666999999999999999999999999999955 99
Q ss_pred cccccCCCCCHHHHHHH-HHHHHHHHHcC
Q psy3027 228 LFFFDMGQMKWEYYAEA-MGLGLRVYLVH 255 (300)
Q Consensus 228 ~F~fD~~~idW~~Y~~~-~~~Girkyllk 255 (300)
.|+||++++||++|+++ |++|+|||++|
T Consensus 463 ~f~~d~~~~~w~~y~~~~~~~g~~~y~~k 491 (491)
T PLN02996 463 MFDFDPKSIDWEDYMTNVHIPGLVKYVLK 491 (491)
T ss_pred EeccCcccCCHHHHHHHhhHHHHHHHhcC
Confidence 99999999999999999 99999999987
No 4
>PF03015 Sterile: Male sterility protein; InterPro: IPR004262 This family represents the C-terminal region of the male sterility protein in a number of organisms. The Arabidopsis thaliana male sterility 2 (MS2) protein is involved in male gametogenesis. The MS2 protein shows sequence similarity to a jojoba protein (also a member of this group) that converts wax fatty acids to fatty alcohols. It has been suggested that a possible function of the MS2 protein may be as a fatty acyl reductase in the formation of pollen wall substances [].; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process
Probab=99.97 E-value=9.9e-31 Score=202.17 Aligned_cols=94 Identities=38% Similarity=0.852 Sum_probs=92.3
Q ss_pred HHhhhhHHHHHHHHHhcCCChHHHHHHHHHHhHHhhhhchhcceEEEechhHHHHHhcCCccccccccccCCCCCHHHHH
Q psy3027 163 FLHTIPGFILDSLASLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWEYYA 242 (300)
Q Consensus 163 ~~~~lPa~~~D~~~~l~G~kp~l~k~~~k~~~~~~~~~~f~~~~w~F~~~n~~~L~~~l~~~D~~~F~fD~~~idW~~Y~ 242 (300)
++|++||+++|+++++.|+||++.|+++|++++.++++||++++|+|+++|+.+|++.|+++||+.|+||+++|||++|+
T Consensus 1 ~~h~lPA~~~D~~~~l~g~kp~~~k~~~ki~~~~~~~~~F~~~eW~F~~~n~~~L~~~l~~~D~~~F~fD~~~idW~~Y~ 80 (94)
T PF03015_consen 1 LFHFLPAYLLDLILRLFGQKPRMVKIYRKIRKALEVLEYFTTNEWIFDNDNTRRLWERLSPEDREIFNFDIRSIDWEEYF 80 (94)
T ss_pred CcchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhCceeecchHHHHHHHhCchhcCceecCCCCCCCHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCC
Q psy3027 243 EAMGLGLRVYLVHD 256 (300)
Q Consensus 243 ~~~~~Girkyllke 256 (300)
.+|+.|+|||++||
T Consensus 81 ~~~~~G~rkyllke 94 (94)
T PF03015_consen 81 RNYIPGIRKYLLKE 94 (94)
T ss_pred HHHHHHHHHHHhCC
Confidence 99999999999998
No 5
>cd09071 FAR_C C-terminal domain of fatty acyl CoA reductases. C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear.
Probab=99.94 E-value=5.4e-27 Score=180.35 Aligned_cols=91 Identities=45% Similarity=0.865 Sum_probs=89.1
Q ss_pred HhhhhHHHHHHHHHhcCCChHHHHHHHHHHhHHhhhhchhcceEEEechhHHHHHhcCCccccccccccCCCCCHHHHHH
Q psy3027 164 LHTIPGFILDSLASLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWEYYAE 243 (300)
Q Consensus 164 ~~~lPa~~~D~~~~l~G~kp~l~k~~~k~~~~~~~~~~f~~~~w~F~~~n~~~L~~~l~~~D~~~F~fD~~~idW~~Y~~ 243 (300)
.|.+||.++|.++.+.|++|++.++++|+.+.+++++||++++|+|+++|+++|++.|+++||+.|+||+++|||++|++
T Consensus 2 ~~~lpa~~~d~~~~l~g~~~~~~~~~~k~~~~~~~~~~Ft~~~w~F~~~n~~~L~~~l~~~Dr~~F~fD~~~idW~~Y~~ 81 (92)
T cd09071 2 LHLLPAYLLDLLLRLLGRKPRLLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRALWERLSEEDRELFNFDIRSIDWDDYFE 81 (92)
T ss_pred cccchHHHHHHHHHHhCCChHHHHHHHHHHHHHHHhhccccCeEEeeCcHHHHHHHHCCHHHHHhCCCCCCCCCHHHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHc
Q psy3027 244 AMGLGLRVYLV 254 (300)
Q Consensus 244 ~~~~Girkyll 254 (300)
++++|+|+|++
T Consensus 82 ~~~~G~r~yll 92 (92)
T cd09071 82 NYIPGLRKYLL 92 (92)
T ss_pred HHHHHHHHHhC
Confidence 99999999975
No 6
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.55 E-value=2.9e-15 Score=135.06 Aligned_cols=83 Identities=28% Similarity=0.447 Sum_probs=60.1
Q ss_pred CCCCcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCC-ChHHHHHHHhhcceeeeccCCCcccc
Q psy3027 3 HEWPNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVY-GPIGMLVGIATGVLHTHLINLNTVTD 79 (300)
Q Consensus 3 ~~~pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~-g~~~~~~~~~~G~l~~~~~~~~~~~d 79 (300)
.+++|+|+.||++||++++++. .++|++|+|||+|+| +|.+||.++.. ++..+.....+|.++..+++++..+|
T Consensus 162 ~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g---~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d 238 (249)
T PF07993_consen 162 QGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG---DSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLD 238 (249)
T ss_dssp TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE----SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--
T ss_pred ccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccc---cCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEe
Confidence 4789999999999999999985 489999999999999 56689999998 77778888889999989888888999
Q ss_pred eeccccccc
Q psy3027 80 MVPSTVSDG 88 (300)
Q Consensus 80 iVPVD~vvn 88 (300)
+||||+||+
T Consensus 239 ~vPVD~va~ 247 (249)
T PF07993_consen 239 LVPVDYVAR 247 (249)
T ss_dssp EEEHHHHHH
T ss_pred EECHHHHHh
Confidence 999999998
No 7
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.25 E-value=1.5e-10 Score=117.79 Aligned_cols=116 Identities=26% Similarity=0.332 Sum_probs=82.3
Q ss_pred CCcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhh-cce---eeeccCCCcccce
Q psy3027 5 WPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIAT-GVL---HTHLINLNTVTDM 80 (300)
Q Consensus 5 ~pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~-G~l---~~~~~~~~~~~di 80 (300)
.+|.|..||+.+|+++.+. .++|++|+||+.|+|..+ .|..+++.++..++..+.. +.. ....+..+...++
T Consensus 147 ~~~~Y~~sK~~~E~~~~~~-~g~~~~ilRp~~v~G~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (657)
T PRK07201 147 LPTPYHRTKFEAEKLVREE-CGLPWRVYRPAVVVGDSR---TGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNI 222 (657)
T ss_pred CCCchHHHHHHHHHHHHHc-CCCcEEEEcCCeeeecCC---CCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeee
Confidence 4588999999999999864 589999999999999765 4555666654433222111 111 1133445567899
Q ss_pred eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
||||+|++ ++.++.. . . .. ..+||++++ +++|+.|+.+. .+..+
T Consensus 223 v~vddva~ai~~~~~~-~---~---~~-g~~~ni~~~--~~~s~~el~~~i~~~~g 268 (657)
T PRK07201 223 VPVDYVADALDHLMHK-D---G---RD-GQTFHLTDP--KPQRVGDIYNAFARAAG 268 (657)
T ss_pred eeHHHHHHHHHHHhcC-c---C---CC-CCEEEeCCC--CCCcHHHHHHHHHHHhC
Confidence 99999999 6655421 1 1 23 579999987 78999999999 87766
No 8
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=98.93 E-value=4e-09 Score=97.03 Aligned_cols=118 Identities=17% Similarity=0.101 Sum_probs=85.6
Q ss_pred CCcHHHHHHHHHHHHHHHhcC-------CCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcc
Q psy3027 5 WPNTYTFTKALAEDVLCKEGK-------GLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTV 77 (300)
Q Consensus 5 ~pNtYt~TK~~aE~lv~~~~~-------~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~ 77 (300)
+.+.|..||++||++|.+..+ +|-.+++||+.|+|..+..+ . ..+......|......++++..
T Consensus 142 ~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~-------~--~~~~~~~~~g~~~~~~g~~~~~ 212 (280)
T PF01073_consen 142 PLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRL-------V--PRLVKMVRSGLFLFQIGDGNNL 212 (280)
T ss_pred ccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccc-------c--chhhHHHHhcccceeecCCCce
Confidence 667999999999999998743 59999999999999655211 1 1223334456555677788889
Q ss_pred cceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCccc-HhHHHHH-HHHcC
Q psy3027 78 TDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPIS-WGKLDEL-ATVCH 134 (300)
Q Consensus 78 ~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t-~~~~~~~-~~~~~ 134 (300)
.|++.|+.||. .+.|+.+........... +++|+++++ .|++ +.|+... .+.++
T Consensus 213 ~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~-G~~y~itd~--~p~~~~~~f~~~~~~~~G 269 (280)
T PF01073_consen 213 FDFVYVENVAHAHVLAAQALLEPGKPERVA-GQAYFITDG--EPVPSFWDFMRPLWEALG 269 (280)
T ss_pred ECcEeHHHHHHHHHHHHHHhccccccccCC-CcEEEEECC--CccCcHHHHHHHHHHHCC
Confidence 99999999999 877765433320000134 789999998 8888 8899877 66655
No 9
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.86 E-value=3.2e-09 Score=99.65 Aligned_cols=120 Identities=16% Similarity=0.197 Sum_probs=79.8
Q ss_pred CCCCcHHHHHHHHHHHHHHHh-cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHh-hcceeeeccCCCcccce
Q psy3027 3 HEWPNTYTFTKALAEDVLCKE-GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIA-TGVLHTHLINLNTVTDM 80 (300)
Q Consensus 3 ~~~pNtYt~TK~~aE~lv~~~-~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~-~G~l~~~~~~~~~~~di 80 (300)
+++++.|+.||+.||.||+++ ..|||++|+||+.|+|+++ .|-.+.-...+-++.++. .|+. | +.+.-.|+
T Consensus 162 ~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~---tG~~n~~D~~~Rlv~~~~~lg~~---P-~~~~~~~~ 234 (382)
T COG3320 162 QGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSR---TGALNTRDFLTRLVLGLLQLGIA---P-DSEYSLDM 234 (382)
T ss_pred CccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCc---cCccccchHHHHHHHHHHHhCCC---C-Ccccchhh
Confidence 468899999999999999999 3499999999999999998 564443333343333322 3433 2 45677899
Q ss_pred eccccccc-cccccccccCCCC----CCCCCCCcEEEeeCCCCCcccHhHHHHH-HH
Q psy3027 81 VPSTVSDG-PSEGVWQKKFPTS----VFRPDPIPIYNFVGSARNPISWGKLDEL-AT 131 (300)
Q Consensus 81 VPVD~vvn-~i~aa~~~~~~~~----~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~ 131 (300)
+|||.|+. +.+.+-..+.+.. .++.. -..|| .++..+.+...++.+. .+
T Consensus 235 ~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~-f~~~~-~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 235 LPVDHVARAVVAPSVQVAEAIAALGAHSDIR-FNQLH-MLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred CccceeeEEeehhhhhHHHHHHHhccCccch-hhhee-cccCCCccchhHHHHhHhh
Confidence 99999999 6555443321000 00011 13455 4455688999999888 54
No 10
>KOG1430|consensus
Probab=98.80 E-value=7.3e-08 Score=91.02 Aligned_cols=190 Identities=13% Similarity=0.069 Sum_probs=119.7
Q ss_pred CCCcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCccccee
Q psy3027 4 EWPNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMV 81 (300)
Q Consensus 4 ~~pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diV 81 (300)
.|++.|+.||++||++|.++. ++|-.+.+||++|+|.-+. .-...+....-.|......++.+..-|.+
T Consensus 148 ~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~---------~~~~~i~~~~~~g~~~f~~g~~~~~~~~~ 218 (361)
T KOG1430|consen 148 KHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDK---------RLLPKIVEALKNGGFLFKIGDGENLNDFT 218 (361)
T ss_pred ccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCc---------cccHHHHHHHHccCceEEeeccccccceE
Confidence 577899999999999999985 4799999999999985541 11234556667787777888889999999
Q ss_pred ccccccc-ccccccccc-CCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCCcccccccceeeeecchHHHH
Q psy3027 82 PSTVSDG-PSEGVWQKK-FPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWPTIRAIWYFSFIPASNKYTYY 158 (300)
Q Consensus 82 PVD~vvn-~i~aa~~~~-~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P~~~~l~~P~~~~~~~~~~~~ 158 (300)
+++-|+- .+.|+.... .... .. +++|+++++ +|+..-++... .+.++...|. ....|-. +
T Consensus 219 ~~~Nva~ahilA~~aL~~~~~~---~~-Gq~yfI~d~--~p~~~~~~~~~l~~~lg~~~~~--~~~~p~~-------l-- 281 (361)
T KOG1430|consen 219 YGENVAWAHILAARALLDKSPS---VN-GQFYFITDD--TPVRFFDFLSPLVKALGYCLPS--SIKLPLF-------L-- 281 (361)
T ss_pred EechhHHHHHHHHHHHHhcCCc---cC-ceEEEEeCC--CcchhhHHHHHHHHhcCCCCCc--eeecchH-------H--
Confidence 9999998 666665443 2111 34 789999988 67655555446 5555513332 1112211 1
Q ss_pred HHHHHHhhhhHHHHHHHHHhcC-CChHHHHHHHHHHhHHhhhhchhcceEEEechhHHHHHhcCCccccccccccCCCCC
Q psy3027 159 ILSFFLHTIPGFILDSLASLSG-RKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMK 237 (300)
Q Consensus 159 i~~~~~~~lPa~~~D~~~~l~G-~kp~l~k~~~k~~~~~~~~~~f~~~~w~F~~~n~~~L~~~l~~~D~~~F~fD~~~id 237 (300)
-+.-+++...+..+.+ ..|.+.+. ++.. +.-.-.|+..++++.+.-.+ .++
T Consensus 282 ------~~~~~~l~e~~~~~l~p~~p~lt~~--~v~~--------~~~~~~f~~~kA~~~lgY~P------------~~~ 333 (361)
T KOG1430|consen 282 ------SYFLAYLLEIVYFLLRPYQPILTRF--RVAL--------LGVTRTFSIEKAKRELGYKP------------LVS 333 (361)
T ss_pred ------HHHHHHHHHHHHHhccCCCCCcChh--heee--------eccccccCHHHHHHhhCCCC------------cCC
Confidence 1112334444444555 45555441 2211 11244678888888777655 345
Q ss_pred HHHHHHHHHH
Q psy3027 238 WEYYAEAMGL 247 (300)
Q Consensus 238 W~~Y~~~~~~ 247 (300)
|++-.+.++.
T Consensus 334 ~~e~~~~~~~ 343 (361)
T KOG1430|consen 334 LEEAIQRTIH 343 (361)
T ss_pred HHHHHHHHHH
Confidence 6666555554
No 11
>PLN02427 UDP-apiose/xylose synthase
Probab=98.70 E-value=4.3e-08 Score=93.69 Aligned_cols=120 Identities=16% Similarity=0.147 Sum_probs=81.1
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccc---cCCCChHH-HHHHHhhcceeeeccCCCcccce
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWI---DNVYGPIG-MLVGIATGVLHTHLINLNTVTDM 80 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~---d~~~g~~~-~~~~~~~G~l~~~~~~~~~~~di 80 (300)
+.|+.||.++|+++..+. .+++++|+||+.|+|+..+.++|-- +.+..... ++.....|.--.+.++++...|.
T Consensus 180 ~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~ 259 (386)
T PLN02427 180 WSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTF 259 (386)
T ss_pred cchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECc
Confidence 579999999999998763 4899999999999998766555410 01111111 11222234322355666777899
Q ss_pred eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
|.||++++ ++.++.... . .. ..+||++++. .++|+.|+.+. .+...
T Consensus 260 i~V~Dva~ai~~al~~~~---~---~~-g~~yni~~~~-~~~s~~el~~~i~~~~g 307 (386)
T PLN02427 260 VYIKDAIEAVLLMIENPA---R---AN-GHIFNVGNPN-NEVTVRQLAEMMTEVYA 307 (386)
T ss_pred EeHHHHHHHHHHHHhCcc---c---cc-CceEEeCCCC-CCccHHHHHHHHHHHhc
Confidence 99999999 766653211 0 12 4699998751 37999999999 77665
No 12
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=98.67 E-value=6.1e-08 Score=90.59 Aligned_cols=113 Identities=22% Similarity=0.270 Sum_probs=74.4
Q ss_pred CCcHHHHHHHHHHHHHHHhc-CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHH-hhcceeeeccCCCcccceec
Q psy3027 5 WPNTYTFTKALAEDVLCKEG-KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGI-ATGVLHTHLINLNTVTDMVP 82 (300)
Q Consensus 5 ~pNtYt~TK~~aE~lv~~~~-~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~-~~G~l~~~~~~~~~~~diVP 82 (300)
..+.|+.||+.+|+++.+.. .++|++|+||+.|.|+.. .|....-.....++.+. ..|. .+.......|.+|
T Consensus 161 ~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~---~g~~~~~~~~~~~~~~~~~~~~---~p~~~~~~~~~~~ 234 (367)
T TIGR01746 161 LAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSY---TGAINSSDILWRMVKGCLALGA---YPDSPELTEDLTP 234 (367)
T ss_pred cCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCC---CCCCCchhHHHHHHHHHHHhCC---CCCCCccccCccc
Confidence 35789999999999998874 489999999999999743 33221111111122211 2232 2322234678999
Q ss_pred cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HH
Q psy3027 83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-AT 131 (300)
Q Consensus 83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~ 131 (300)
||++++ ++.++..... . .. ..+||++++ ++++|+|+.+. .+
T Consensus 235 vddva~ai~~~~~~~~~--~---~~-~~~~~v~~~--~~~s~~e~~~~i~~ 277 (367)
T TIGR01746 235 VDYVARAIVALSSQPAA--S---AG-GPVFHVVNP--EPVSLDEFLEWLER 277 (367)
T ss_pred HHHHHHHHHHHHhCCCc--c---cC-CceEEecCC--CCCCHHHHHHHHHH
Confidence 999999 7665532110 0 12 469999987 88999999999 76
No 13
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=98.63 E-value=1.1e-07 Score=89.78 Aligned_cols=116 Identities=12% Similarity=-0.038 Sum_probs=81.1
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCC-hHHHHHHHhhcceeeeccCCCcccceecc
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYG-PIGMLVGIATGVLHTHLINLNTVTDMVPS 83 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g-~~~~~~~~~~G~l~~~~~~~~~~~diVPV 83 (300)
+.|+.||..+|+++..+. .++|++|+||+.|+|....|-.+ ... ...++.....|.--.+.++++..-|+|.|
T Consensus 163 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~----~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v 238 (348)
T PRK15181 163 SPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGA----YSAVIPRWILSLLKDEPIYINGDGSTSRDFCYI 238 (348)
T ss_pred ChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCc----cccCHHHHHHHHHcCCCcEEeCCCCceEeeEEH
Confidence 579999999999998763 48999999999999976543211 111 12233333334333466788888899999
Q ss_pred ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
|++|+ ++.++.+... . .. ..+||++++ .++|++|+.+. .+...
T Consensus 239 ~D~a~a~~~~~~~~~~--~---~~-~~~yni~~g--~~~s~~e~~~~i~~~~~ 283 (348)
T PRK15181 239 ENVIQANLLSATTNDL--A---SK-NKVYNVAVG--DRTSLNELYYLIRDGLN 283 (348)
T ss_pred HHHHHHHHHHHhcccc--c---CC-CCEEEecCC--CcEeHHHHHHHHHHHhC
Confidence 99999 7655422111 1 23 569999988 78999999999 76554
No 14
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.63 E-value=9.7e-08 Score=89.89 Aligned_cols=110 Identities=15% Similarity=0.019 Sum_probs=80.5
Q ss_pred cHHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027 7 NTYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST 84 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD 84 (300)
+.|+.||..+|+++... ..++|++|+||+.|+|..+.|- + ....++.....|.--.+.++++..-|+|.||
T Consensus 158 s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~-~------~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~ 230 (355)
T PRK10217 158 SPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE-K------LIPLMILNALAGKPLPVYGNGQQIRDWLYVE 230 (355)
T ss_pred ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc-c------HHHHHHHHHhcCCCceEeCCCCeeeCcCcHH
Confidence 67999999999999876 3489999999999999765321 1 1112223333443223557888889999999
Q ss_pred cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
.++. ++.++. .. .. ..+||++++ +++|+.|+.+. .+..+
T Consensus 231 D~a~a~~~~~~-~~-------~~-~~~yni~~~--~~~s~~~~~~~i~~~~~ 271 (355)
T PRK10217 231 DHARALYCVAT-TG-------KV-GETYNIGGH--NERKNLDVVETICELLE 271 (355)
T ss_pred HHHHHHHHHHh-cC-------CC-CCeEEeCCC--CcccHHHHHHHHHHHhc
Confidence 9999 766652 11 22 569999998 88999999998 77766
No 15
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=98.58 E-value=1.5e-07 Score=86.38 Aligned_cols=110 Identities=16% Similarity=0.040 Sum_probs=79.4
Q ss_pred cHHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027 7 NTYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST 84 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD 84 (300)
+.|+.||+.+|+++... ..++|++|+||+.|+|+...|- ++ ...++.....|..-.+.++++...|.|+||
T Consensus 148 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~-~~------~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 220 (317)
T TIGR01181 148 SPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE-KL------IPLMITNALAGKPLPVYGDGQQVRDWLYVE 220 (317)
T ss_pred CchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc-cH------HHHHHHHHhcCCCceEeCCCceEEeeEEHH
Confidence 46999999999999876 3589999999999999654321 11 112333344443223556777888999999
Q ss_pred cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
.+++ +..+..+ . .. ..+||++++ .++|+.|+.+. .+.+.
T Consensus 221 D~a~~~~~~~~~-~-------~~-~~~~~~~~~--~~~s~~~~~~~i~~~~~ 261 (317)
T TIGR01181 221 DHCRAIYLVLEK-G-------RV-GETYNIGGG--NERTNLEVVETILELLG 261 (317)
T ss_pred HHHHHHHHHHcC-C-------CC-CceEEeCCC--CceeHHHHHHHHHHHhC
Confidence 9999 6555421 1 22 569999988 78999999999 87766
No 16
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=98.55 E-value=2.3e-07 Score=85.59 Aligned_cols=112 Identities=13% Similarity=-0.024 Sum_probs=79.5
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHH-HHHhhcce-eeeccCCCcccceec
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGML-VGIATGVL-HTHLINLNTVTDMVP 82 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~-~~~~~G~l-~~~~~~~~~~~diVP 82 (300)
+.|+.||..+|++++++. .++|++|+||+.|+|....+ .|. +.+....+ ..+..|.. ....++++...|++.
T Consensus 138 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~-~~~---~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~ 213 (308)
T PRK11150 138 NVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGH-KGS---MASVAFHLNNQLNNGENPKLFEGSENFKRDFVY 213 (308)
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCC-CCc---cchhHHHHHHHHhcCCCCEEecCCCceeeeeee
Confidence 689999999999998873 48999999999999976533 121 11111111 23344432 233456677889999
Q ss_pred cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
||++++ ++.++. . .. ..+||++++ .++|+.|+.+. .+...
T Consensus 214 v~D~a~a~~~~~~-~--------~~-~~~yni~~~--~~~s~~el~~~i~~~~~ 255 (308)
T PRK11150 214 VGDVAAVNLWFWE-N--------GV-SGIFNCGTG--RAESFQAVADAVLAYHK 255 (308)
T ss_pred HHHHHHHHHHHHh-c--------CC-CCeEEcCCC--CceeHHHHHHHHHHHhC
Confidence 999999 776652 1 12 359999998 78999999999 77765
No 17
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.51 E-value=3.3e-07 Score=86.19 Aligned_cols=109 Identities=16% Similarity=0.044 Sum_probs=79.9
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChH-HHHHHHhhcceeeeccCCCcccceecc
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPI-GMLVGIATGVLHTHLINLNTVTDMVPS 83 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~-~~~~~~~~G~l~~~~~~~~~~~diVPV 83 (300)
|.|+.||+.+|+++...+ .++|++|+||+.|+|....+ .+.. .++.....|.--.+.++++...|.|.|
T Consensus 165 ~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v 236 (352)
T PRK10084 165 SPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFP--------EKLIPLVILNALEGKPLPIYGKGDQIRDWLYV 236 (352)
T ss_pred ChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCc--------cchHHHHHHHHhcCCCeEEeCCCCeEEeeEEH
Confidence 799999999999998763 48999999999999965422 1111 223333334322456778889999999
Q ss_pred ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
|++++ ++.++. .. .. ..+||++++ ++.|+.|+.+. .+..+
T Consensus 237 ~D~a~a~~~~l~-~~-------~~-~~~yni~~~--~~~s~~~~~~~i~~~~~ 278 (352)
T PRK10084 237 EDHARALYKVVT-EG-------KA-GETYNIGGH--NEKKNLDVVLTICDLLD 278 (352)
T ss_pred HHHHHHHHHHHh-cC-------CC-CceEEeCCC--CcCcHHHHHHHHHHHhc
Confidence 99999 765542 11 23 579999988 78999999999 77766
No 18
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=98.49 E-value=3.3e-07 Score=83.47 Aligned_cols=107 Identities=13% Similarity=0.066 Sum_probs=73.9
Q ss_pred CcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027 6 PNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV 85 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~ 85 (300)
.+.|+.||..+|+++.+. ++|++|+||++|+|..+. .++ ...++.....|. .+...++...+.+.||+
T Consensus 121 ~~~Y~~~K~~~E~~~~~~--~~~~~ilR~~~v~G~~~~------~~~--~~~~~~~~~~~~--~~~~~~~~~~~~v~v~D 188 (287)
T TIGR01214 121 LNVYGQSKLAGEQAIRAA--GPNALIVRTSWLYGGGGG------RNF--VRTMLRLAGRGE--ELRVVDDQIGSPTYAKD 188 (287)
T ss_pred cchhhHHHHHHHHHHHHh--CCCeEEEEeeecccCCCC------CCH--HHHHHHHhhcCC--CceEecCCCcCCcCHHH
Confidence 468999999999999876 689999999999986531 011 112232222232 12222345678899999
Q ss_pred ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
+++ ++.++.. .. .. ..+||++++ +++|+.|+.+. .+..+
T Consensus 189 va~a~~~~~~~-~~------~~-~~~~ni~~~--~~~s~~e~~~~i~~~~~ 229 (287)
T TIGR01214 189 LARVIAALLQR-LA------RA-RGVYHLANS--GQCSWYEFAQAIFEEAG 229 (287)
T ss_pred HHHHHHHHHhh-cc------CC-CCeEEEECC--CCcCHHHHHHHHHHHhC
Confidence 999 7666532 11 23 569999987 78999999999 77766
No 19
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=98.48 E-value=6.3e-07 Score=84.31 Aligned_cols=124 Identities=16% Similarity=0.109 Sum_probs=82.8
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCC-hHHHHHHHhhcceeeeccCCCcccceecc
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYG-PIGMLVGIATGVLHTHLINLNTVTDMVPS 83 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g-~~~~~~~~~~G~l~~~~~~~~~~~diVPV 83 (300)
|.|+.||..+|+++.++. .++|++|+||+.|+|....|...=-++... ...++..+..|.--.+.++++..-|+|.|
T Consensus 147 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v 226 (347)
T PRK11908 147 WIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDI 226 (347)
T ss_pred chHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccH
Confidence 479999999999998873 589999999999999766542110001111 11233333344322355567778899999
Q ss_pred ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCC
Q psy3027 84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWP 138 (300)
Q Consensus 84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P 138 (300)
|++++ ++.++..... . .. ..+||++++ .+++|++|+.+. .+..+ ..|
T Consensus 227 ~D~a~a~~~~~~~~~~--~---~~-g~~yni~~~-~~~~s~~e~~~~i~~~~~-~~~ 275 (347)
T PRK11908 227 DDGIDALMKIIENKDG--V---AS-GKIYNIGNP-KNNHSVRELANKMLELAA-EYP 275 (347)
T ss_pred HHHHHHHHHHHhCccc--c---CC-CCeEEeCCC-CCCcCHHHHHHHHHHHhc-Ccc
Confidence 99999 7766532110 0 22 569999864 247999999999 87766 444
No 20
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.46 E-value=3.9e-07 Score=93.38 Aligned_cols=110 Identities=16% Similarity=0.066 Sum_probs=79.9
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST 84 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD 84 (300)
|.|+.||..+|+++.++. .++|++|+||+.|+|..+.| +++ ...++.....|..-.++++++...+.|+||
T Consensus 157 ~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~-----~~~--i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~ 229 (668)
T PLN02260 157 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP-----EKL--IPKFILLAMQGKPLPIHGDGSNVRSYLYCE 229 (668)
T ss_pred CCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCc-----ccH--HHHHHHHHhCCCCeEEecCCCceEeeEEHH
Confidence 679999999999998763 48999999999999976532 111 112223333343234667788888999999
Q ss_pred cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
++++ +..++. .. .. ..+||++++ +++|+.|+.+. .+.++
T Consensus 230 Dva~a~~~~l~-~~-------~~-~~vyni~~~--~~~s~~el~~~i~~~~g 270 (668)
T PLN02260 230 DVAEAFEVVLH-KG-------EV-GHVYNIGTK--KERRVIDVAKDICKLFG 270 (668)
T ss_pred HHHHHHHHHHh-cC-------CC-CCEEEECCC--CeeEHHHHHHHHHHHhC
Confidence 9999 665542 11 22 569999988 78999999999 77665
No 21
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=98.45 E-value=4.5e-07 Score=99.76 Aligned_cols=115 Identities=17% Similarity=0.239 Sum_probs=76.9
Q ss_pred CCcHHHHHHHHHHHHHHHh-cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhccee-eeccCCCcccceec
Q psy3027 5 WPNTYTFTKALAEDVLCKE-GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLH-THLINLNTVTDMVP 82 (300)
Q Consensus 5 ~pNtYt~TK~~aE~lv~~~-~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~-~~~~~~~~~~diVP 82 (300)
.++.|+.||+.||+++.++ ..++|++|+||+.|+|+...+. | + ...++....++... ....+.....|.+|
T Consensus 1146 ~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~--~--~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 1218 (1389)
T TIGR03443 1146 LGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGA--T--N---TDDFLLRMLKGCIQLGLIPNINNTVNMVP 1218 (1389)
T ss_pred CCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCC--C--C---chhHHHHHHHHHHHhCCcCCCCCcccccc
Confidence 4578999999999999886 3589999999999999865421 2 1 12233322222211 11123445689999
Q ss_pred cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
||+|++ ++.++..... . .. ..+||++++ .+++|.++.+. .+...
T Consensus 1219 Vddva~ai~~~~~~~~~--~---~~-~~i~~~~~~--~~~~~~~~~~~l~~~g~ 1264 (1389)
T TIGR03443 1219 VDHVARVVVAAALNPPK--E---SE-LAVAHVTGH--PRIRFNDFLGTLKTYGY 1264 (1389)
T ss_pred HHHHHHHHHHHHhCCcc--c---CC-CCEEEeCCC--CCCcHHHHHHHHHHhCC
Confidence 999999 7666532211 1 12 469999877 67999999999 76533
No 22
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=98.44 E-value=5.5e-07 Score=82.92 Aligned_cols=120 Identities=18% Similarity=0.092 Sum_probs=80.1
Q ss_pred cHHHHHHHHHHHHHHHhc---CCCCEEEecccEEeeccCCCccccccC-CCChHHHHHHHhhcc---eeee----c-cCC
Q psy3027 7 NTYTFTKALAEDVLCKEG---KGLPLAVLRPAVIVSTYREPVRGWIDN-VYGPIGMLVGIATGV---LHTH----L-INL 74 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~---~~lPv~IvRPsiV~~~~~eP~pGw~d~-~~g~~~~~~~~~~G~---l~~~----~-~~~ 74 (300)
+.|+.||+.+|+++.+.. .+++++|+||+.|+|...+++.|+... .......+.....|. +... + .++
T Consensus 143 ~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 222 (328)
T TIGR01179 143 NPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDG 222 (328)
T ss_pred CchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCC
Confidence 679999999999998762 689999999999999876655554311 111112222222211 1111 1 244
Q ss_pred Ccccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 75 NTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 75 ~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
+...|.|++|.+++ +..++..... . .. ..+||++++ .++|++|+.+. .+..+
T Consensus 223 ~~~~~~v~~~D~a~~~~~~~~~~~~--~---~~-~~~~n~~~~--~~~s~~ei~~~~~~~~g 276 (328)
T TIGR01179 223 TCVRDYIHVMDLADAHLAALEYLLN--G---GE-SHVYNLGYG--QGFSVLEVIEAFKKVSG 276 (328)
T ss_pred ceEEeeeeHHHHHHHHHHHHhhhhc--C---CC-cceEEcCCC--CcccHHHHHHHHHHHhC
Confidence 56679999999999 6655533221 1 22 579999987 78999999999 77766
No 23
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.42 E-value=5.6e-07 Score=87.81 Aligned_cols=111 Identities=10% Similarity=-0.054 Sum_probs=80.8
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST 84 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD 84 (300)
+.|+.||..||+++.++. .+++++|+||+.|+|....+-.|. -...++.....|.--.+.++++..-|+|.||
T Consensus 261 s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~-----~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~ 335 (436)
T PLN02166 261 SCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGR-----VVSNFVAQTIRKQPMTVYGDGKQTRSFQYVS 335 (436)
T ss_pred CchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccc-----hHHHHHHHHhcCCCcEEeCCCCeEEeeEEHH
Confidence 569999999999998873 489999999999999654321110 0122333344444334667888888999999
Q ss_pred cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
++++ ++.++. . .. ..+||++++ +++|+.|+.+. .+...
T Consensus 336 Dva~ai~~~~~-~--------~~-~giyNIgs~--~~~Si~ela~~I~~~~g 375 (436)
T PLN02166 336 DLVDGLVALME-G--------EH-VGPFNLGNP--GEFTMLELAEVVKETID 375 (436)
T ss_pred HHHHHHHHHHh-c--------CC-CceEEeCCC--CcEeHHHHHHHHHHHhC
Confidence 9999 766552 1 12 459999987 78999999999 87766
No 24
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=98.39 E-value=1.4e-06 Score=80.29 Aligned_cols=113 Identities=13% Similarity=0.070 Sum_probs=77.7
Q ss_pred CcHHHHHHHHHHHHHHHh----cCCCCEEEecccEEeeccCCCccccccCCCChH-HHHHHHhhcc-eeee-----ccCC
Q psy3027 6 PNTYTFTKALAEDVLCKE----GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPI-GMLVGIATGV-LHTH-----LINL 74 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~----~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~-~~~~~~~~G~-l~~~-----~~~~ 74 (300)
.+.|+.||..+|++++++ ..+++++|+||+.|+|+.+.+- | ++.+.. .++.....|. +... .+++
T Consensus 135 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 210 (314)
T TIGR02197 135 LNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHK-G---KMASVAFHLFNQIKAGGNVKLFKSSEGFKDG 210 (314)
T ss_pred CCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCC-C---CcccHHHHHHHHHhcCCCeEEecCccccCCC
Confidence 478999999999999874 3468999999999999765321 1 111111 2222223332 2211 2356
Q ss_pred Ccccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 75 NTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 75 ~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
+...|+++||++++ +..++.. . . ..+||++++ .++|+.|+.+. .+..+
T Consensus 211 ~~~~~~i~v~D~a~~i~~~~~~-~--------~-~~~yni~~~--~~~s~~e~~~~i~~~~g 260 (314)
T TIGR02197 211 EQLRDFVYVKDVVDVNLWLLEN-G--------V-SGIFNLGTG--RARSFNDLADAVFKALG 260 (314)
T ss_pred CceeeeEEHHHHHHHHHHHHhc-c--------c-CceEEcCCC--CCccHHHHHHHHHHHhC
Confidence 77789999999999 7666532 1 1 459999988 78999999999 77666
No 25
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.38 E-value=1.1e-06 Score=80.52 Aligned_cols=111 Identities=18% Similarity=0.147 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHHhcC--CCCEEEecccEEeeccCCCc-cccccCCCChHHHHHHHhhcce-eeeccCCCcccceecc
Q psy3027 8 TYTFTKALAEDVLCKEGK--GLPLAVLRPAVIVSTYREPV-RGWIDNVYGPIGMLVGIATGVL-HTHLINLNTVTDMVPS 83 (300)
Q Consensus 8 tYt~TK~~aE~lv~~~~~--~lPv~IvRPsiV~~~~~eP~-pGw~d~~~g~~~~~~~~~~G~l-~~~~~~~~~~~diVPV 83 (300)
.|+.||.+||+++.++.. ++|++|+||+.|+|..+.+. ++| ....++.....|.. ....++++...+++.|
T Consensus 141 ~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 215 (314)
T COG0451 141 PYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSG-----VVSAFIRQLLKGEPIIVIGGDGSQTRDFVYV 215 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcC-----cHHHHHHHHHhCCCcceEeCCCceeEeeEeH
Confidence 499999999999999864 89999999999999766542 111 12233433444542 4566677777899999
Q ss_pred ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
|.++. ++.++.. . .. . +||++++. .+.|.+|+.+. .+...
T Consensus 216 ~D~a~~~~~~~~~-----~---~~-~-~~ni~~~~-~~~~~~e~~~~~~~~~~ 257 (314)
T COG0451 216 DDVADALLLALEN-----P---DG-G-VFNIGSGT-AEITVRELAEAVAEAVG 257 (314)
T ss_pred HHHHHHHHHHHhC-----C---CC-c-EEEeCCCC-CcEEHHHHHHHHHHHhC
Confidence 99999 7666521 1 23 4 99999873 38999999999 77766
No 26
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.37 E-value=9.7e-07 Score=86.32 Aligned_cols=111 Identities=8% Similarity=-0.102 Sum_probs=79.7
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST 84 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD 84 (300)
+.|..||..||+++..+. .+++++|+||+.|+|....+-.|- ....++.....|.--.++++++..-|++.||
T Consensus 260 s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~-----~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~ 334 (442)
T PLN02206 260 SCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGR-----VVSNFVAQALRKEPLTVYGDGKQTRSFQFVS 334 (442)
T ss_pred chHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccc-----hHHHHHHHHHcCCCcEEeCCCCEEEeEEeHH
Confidence 679999999999998763 489999999999999654211110 1122333333333224667788888999999
Q ss_pred cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
+++. ++.++. . .. ..+||++++ +++|+.|+.+. .+..+
T Consensus 335 Dva~ai~~a~e---~------~~-~g~yNIgs~--~~~sl~Elae~i~~~~g 374 (442)
T PLN02206 335 DLVEGLMRLME---G------EH-VGPFNLGNP--GEFTMLELAKVVQETID 374 (442)
T ss_pred HHHHHHHHHHh---c------CC-CceEEEcCC--CceeHHHHHHHHHHHhC
Confidence 9999 776652 1 12 458999988 78999999999 87765
No 27
>PLN02214 cinnamoyl-CoA reductase
Probab=98.35 E-value=1.7e-06 Score=81.49 Aligned_cols=107 Identities=21% Similarity=0.214 Sum_probs=72.4
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST 84 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD 84 (300)
+.|+.||..||+++.++. .++|++|+||+.|+|....|. .......+.....|.... . ++..-|+|.||
T Consensus 159 ~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~------~~~~~~~~~~~~~g~~~~-~--~~~~~~~i~V~ 229 (342)
T PLN02214 159 NWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPT------INASLYHVLKYLTGSAKT-Y--ANLTQAYVDVR 229 (342)
T ss_pred cHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC------CCchHHHHHHHHcCCccc-C--CCCCcCeeEHH
Confidence 579999999999998863 489999999999999754431 111112222233333222 1 23456999999
Q ss_pred cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
+||+ ++.++.+ . .. ...||++++ +.++.|+.+. .+...
T Consensus 230 Dva~a~~~al~~-~-------~~-~g~yn~~~~---~~~~~el~~~i~~~~~ 269 (342)
T PLN02214 230 DVALAHVLVYEA-P-------SA-SGRYLLAES---ARHRGEVVEILAKLFP 269 (342)
T ss_pred HHHHHHHHHHhC-c-------cc-CCcEEEecC---CCCHHHHHHHHHHHCC
Confidence 9999 7766632 1 12 348998753 5799999999 77654
No 28
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.33 E-value=1.7e-06 Score=88.74 Aligned_cols=121 Identities=16% Similarity=0.098 Sum_probs=80.8
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChH-HHHHHHhhcceeeeccCCCcccceecc
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPI-GMLVGIATGVLHTHLINLNTVTDMVPS 83 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~-~~~~~~~~G~l~~~~~~~~~~~diVPV 83 (300)
+.|+.||.++|+++..+. .++|++|+||+.|+|..+.+....-.+-.+.. .++.....|.--.+.++++..-|.|.|
T Consensus 461 s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v 540 (660)
T PRK08125 461 WIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDI 540 (660)
T ss_pred cchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeH
Confidence 369999999999998863 38999999999999976543211100001111 222233334332455777888999999
Q ss_pred ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
|.+++ +++++..... . .. ..+||++++ .+++|++|+.+. .+..+
T Consensus 541 ~Dva~a~~~~l~~~~~--~---~~-g~iyni~~~-~~~~s~~el~~~i~~~~g 586 (660)
T PRK08125 541 RDGIEALFRIIENKDN--R---CD-GQIINIGNP-DNEASIRELAEMLLASFE 586 (660)
T ss_pred HHHHHHHHHHHhcccc--c---cC-CeEEEcCCC-CCceeHHHHHHHHHHHhc
Confidence 99999 7666532110 1 23 569999986 236899999999 77766
No 29
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.31 E-value=1.6e-06 Score=79.54 Aligned_cols=113 Identities=11% Similarity=-0.026 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHH----Hhhcce-eeeccCCCcccce
Q psy3027 8 TYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVG----IATGVL-HTHLINLNTVTDM 80 (300)
Q Consensus 8 tYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~----~~~G~l-~~~~~~~~~~~di 80 (300)
.|..||..+|+++..+ ..++|++++||+.|+|... ...+-..++ ...++.. ...|.- ...+++++...|.
T Consensus 129 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~-~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~ 205 (306)
T PLN02725 129 WYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHD-NFHPENSHV--IPALIRRFHEAKANGAPEVVVWGSGSPLREF 205 (306)
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCC-CCCCCCCcc--cHHHHHHHHHHhhcCCCeEEEcCCCCeeecc
Confidence 3999999999998775 3489999999999999753 111100011 1122211 122322 2236677878899
Q ss_pred eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
|.||.+++ ++.++.. . .. ...||++++ .++|+.|+.+. .+.+.
T Consensus 206 i~v~Dv~~~~~~~~~~-~-------~~-~~~~ni~~~--~~~s~~e~~~~i~~~~~ 250 (306)
T PLN02725 206 LHVDDLADAVVFLMRR-Y-------SG-AEHVNVGSG--DEVTIKELAELVKEVVG 250 (306)
T ss_pred ccHHHHHHHHHHHHhc-c-------cc-CcceEeCCC--CcccHHHHHHHHHHHhC
Confidence 99999999 6655521 1 12 457899887 78999999999 77765
No 30
>PLN02572 UDP-sulfoquinovose synthase
Probab=98.30 E-value=1.2e-06 Score=85.61 Aligned_cols=117 Identities=12% Similarity=0.087 Sum_probs=79.1
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCc---cccccCC------CChH-HHHHHHhhcceeeeccCC
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPV---RGWIDNV------YGPI-GMLVGIATGVLHTHLINL 74 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~---pGw~d~~------~g~~-~~~~~~~~G~l~~~~~~~ 74 (300)
|.|+.||..+|+++..++ .++|++++||+.|+|..+.+- |.-+.++ .+.. .++.....|.--.+.+++
T Consensus 226 s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G 305 (442)
T PLN02572 226 SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKG 305 (442)
T ss_pred CcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCC
Confidence 579999999999998874 389999999999999765331 1111111 1212 223333345433456777
Q ss_pred Ccccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHH
Q psy3027 75 NTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATV 132 (300)
Q Consensus 75 ~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~ 132 (300)
+..-|+|.||+||+ ++.++..... . +. ..+||+.+ .++|++|+.+. .+.
T Consensus 306 ~~~Rdfi~V~Dva~a~~~al~~~~~--~---g~-~~i~Nigs---~~~si~el~~~i~~~ 356 (442)
T PLN02572 306 GQTRGFLDIRDTVRCIEIAIANPAK--P---GE-FRVFNQFT---EQFSVNELAKLVTKA 356 (442)
T ss_pred CEEECeEEHHHHHHHHHHHHhChhh--c---Cc-eeEEEeCC---CceeHHHHHHHHHHH
Confidence 88889999999999 7766532111 1 22 35899964 36999999999 776
No 31
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.24 E-value=3.2e-06 Score=80.62 Aligned_cols=112 Identities=11% Similarity=0.008 Sum_probs=79.5
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCC-CChHHHHHHHhh-cceeeeccCCCcccceec
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNV-YGPIGMLVGIAT-GVLHTHLINLNTVTDMVP 82 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~-~g~~~~~~~~~~-G~l~~~~~~~~~~~diVP 82 (300)
+.|+.+|..+|+++..+. .++|++|+||+.|+|.... |-++- .-+..++..... +..-.++++++...|+|.
T Consensus 165 s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~ 240 (370)
T PLN02695 165 DAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGT----WKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTF 240 (370)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCC----ccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEe
Confidence 589999999999998863 4899999999999996432 21111 113344433322 222246678888899999
Q ss_pred cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
||+++. +..++. . .. ..+||++++ +++|++|+.+. .+...
T Consensus 241 v~D~a~ai~~~~~-~--------~~-~~~~nv~~~--~~~s~~el~~~i~~~~g 282 (370)
T PLN02695 241 IDECVEGVLRLTK-S--------DF-REPVNIGSD--EMVSMNEMAEIALSFEN 282 (370)
T ss_pred HHHHHHHHHHHHh-c--------cC-CCceEecCC--CceeHHHHHHHHHHHhC
Confidence 999999 665432 1 12 458999987 78999999999 77655
No 32
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=98.19 E-value=6.1e-06 Score=76.39 Aligned_cols=106 Identities=14% Similarity=0.209 Sum_probs=72.0
Q ss_pred cHHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027 7 NTYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST 84 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD 84 (300)
+.|+.||.++|+++.++ ..++|++|+||+.|+|....|..+ .....+.....|.- ..++...|.|.||
T Consensus 160 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~------~~~~~~~~~~~~~~----~~~~~~~~~i~v~ 229 (322)
T PLN02662 160 LWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLN------TSAEAILNLINGAQ----TFPNASYRWVDVR 229 (322)
T ss_pred chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCC------chHHHHHHHhcCCc----cCCCCCcCeEEHH
Confidence 57999999999999876 348999999999999976544211 11222222222321 1234567999999
Q ss_pred cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
.||+ ++.++. .. .. ...||++ + .++|+.|+.+. .+...
T Consensus 230 Dva~a~~~~~~-~~-------~~-~~~~~~~-g--~~~s~~e~~~~i~~~~~ 269 (322)
T PLN02662 230 DVANAHIQAFE-IP-------SA-SGRYCLV-E--RVVHYSEVVKILHELYP 269 (322)
T ss_pred HHHHHHHHHhc-Cc-------Cc-CCcEEEe-C--CCCCHHHHHHHHHHHCC
Confidence 9999 766652 11 11 3478886 4 57999999999 77654
No 33
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=98.17 E-value=6e-06 Score=76.71 Aligned_cols=106 Identities=18% Similarity=0.221 Sum_probs=73.0
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST 84 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD 84 (300)
+.|..||.+||+++.++. .+++++|+||+.|+|....|.. ++ ...++..+..|.- .. ++...+.|.||
T Consensus 161 ~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~----~~--~~~~~~~~~~g~~--~~--~~~~~~~v~v~ 230 (322)
T PLN02986 161 NWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTL----NF--SVELIVDFINGKN--LF--NNRFYRFVDVR 230 (322)
T ss_pred cchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCC----Cc--cHHHHHHHHcCCC--CC--CCcCcceeEHH
Confidence 669999999999998863 4899999999999997665421 11 1233333333331 11 23446899999
Q ss_pred cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
.+|+ ++.++.. . .. ..+||+ ++ .++|++|+.+. .+.+.
T Consensus 231 Dva~a~~~al~~-~-------~~-~~~yni-~~--~~~s~~e~~~~i~~~~~ 270 (322)
T PLN02986 231 DVALAHIKALET-P-------SA-NGRYII-DG--PIMSVNDIIDILRELFP 270 (322)
T ss_pred HHHHHHHHHhcC-c-------cc-CCcEEE-ec--CCCCHHHHHHHHHHHCC
Confidence 9999 7766532 1 11 348998 44 47999999999 77655
No 34
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=98.16 E-value=6.2e-06 Score=76.65 Aligned_cols=106 Identities=15% Similarity=0.205 Sum_probs=71.4
Q ss_pred cHHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027 7 NTYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST 84 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD 84 (300)
+.|+.||..+|+++..+ ..++|++|+||+.|+|....|..+ + ...++.....|-.. .+ ...-|++.||
T Consensus 162 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~----~--~~~~i~~~~~~~~~--~~--~~~r~~i~v~ 231 (325)
T PLN02989 162 QWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLN----F--SVAVIVELMKGKNP--FN--TTHHRFVDVR 231 (325)
T ss_pred cchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCC----c--hHHHHHHHHcCCCC--CC--CcCcCeeEHH
Confidence 57999999999999876 348999999999999976654311 1 12233333233211 11 2234899999
Q ss_pred cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
++|+ ++.++.. . .. ..+||+ ++ .++|++|+.+. .+...
T Consensus 232 Dva~a~~~~l~~-~-------~~-~~~~ni-~~--~~~s~~ei~~~i~~~~~ 271 (325)
T PLN02989 232 DVALAHVKALET-P-------SA-NGRYII-DG--PVVTIKDIENVLREFFP 271 (325)
T ss_pred HHHHHHHHHhcC-c-------cc-CceEEE-ec--CCCCHHHHHHHHHHHCC
Confidence 9999 7666521 1 12 348999 44 37999999999 77655
No 35
>PLN00198 anthocyanidin reductase; Provisional
Probab=98.12 E-value=8.5e-06 Score=76.29 Aligned_cols=110 Identities=13% Similarity=0.012 Sum_probs=68.9
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeecc-CC----Ccccc
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLI-NL----NTVTD 79 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~-~~----~~~~d 79 (300)
+.|+.||..+|+++..+. .+++++|+||+.|+|..+.+. + ....+++.....|.--...+ ++ +...|
T Consensus 166 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~---~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 239 (338)
T PLN00198 166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSD---I---PSSLSLAMSLITGNEFLINGLKGMQMLSGSIS 239 (338)
T ss_pred chhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCC---C---CCcHHHHHHHHcCCccccccccccccccCCcc
Confidence 359999999999998863 389999999999999765321 1 11112222222232111111 11 12359
Q ss_pred eeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 80 MVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 80 iVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
.|.||++|+ ++.++.. . .. ..+|+ +++ .++|+.|+.+. .+...
T Consensus 240 ~i~V~D~a~a~~~~~~~-~-------~~-~~~~~-~~~--~~~s~~el~~~i~~~~~ 284 (338)
T PLN00198 240 ITHVEDVCRAHIFLAEK-E-------SA-SGRYI-CCA--ANTSVPELAKFLIKRYP 284 (338)
T ss_pred eeEHHHHHHHHHHHhhC-c-------Cc-CCcEE-Eec--CCCCHHHHHHHHHHHCC
Confidence 999999999 7666532 1 11 23675 444 46899999999 76554
No 36
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=98.08 E-value=7.8e-06 Score=77.01 Aligned_cols=117 Identities=13% Similarity=0.001 Sum_probs=77.5
Q ss_pred cHHHHHHHHHHHHHHHhc---------CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcc
Q psy3027 7 NTYTFTKALAEDVLCKEG---------KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTV 77 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~---------~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~ 77 (300)
+.|+.||..+|.+++.++ .+++++++||+.|+|..+.. + +++ ...++.....|..- ..++++..
T Consensus 150 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-~---~~~--~~~~~~~~~~g~~~-~~~~g~~~ 222 (349)
T TIGR02622 150 DPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWA-E---DRL--IPDVIRAFSSNKIV-IIRNPDAT 222 (349)
T ss_pred CcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcch-h---hhh--hHHHHHHHhcCCCe-EECCCCcc
Confidence 679999999999997752 28999999999999854210 0 111 11233333344332 23467788
Q ss_pred cceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 78 TDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 78 ~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
-|+|.||++|+ ++.++.+...... .. ..+||++|+...+.|..|+.+. .+...
T Consensus 223 rd~i~v~D~a~a~~~~~~~~~~~~~---~~-~~~yni~s~~~~~~s~~~~~~~i~~~~~ 277 (349)
T TIGR02622 223 RPWQHVLEPLSGYLLLAEKLFTGQA---EF-AGAWNFGPRASDNARVVELVVDALEFWW 277 (349)
T ss_pred cceeeHHHHHHHHHHHHHHHhhcCc---cc-cceeeeCCCcccCcCHHHHHHHHHHHhc
Confidence 89999999999 7766532211001 12 4599999865478999999988 66544
No 37
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.06 E-value=3.7e-05 Score=71.01 Aligned_cols=106 Identities=15% Similarity=0.141 Sum_probs=70.6
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST 84 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD 84 (300)
+.|..||..+|+++.++. .++|++|+||+.|+|..... ......++.....+.. +...+...|.|.||
T Consensus 139 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~-------~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~ 208 (328)
T TIGR03466 139 GHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIK-------PTPTGRIIVDFLNGKM---PAYVDTGLNLVHVD 208 (328)
T ss_pred ChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCC-------CCcHHHHHHHHHcCCC---ceeeCCCcceEEHH
Confidence 479999999999999873 48999999999999865310 0011123332222221 11123446899999
Q ss_pred cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
.+++ ++.++.. . .. ..+|+++ + .++|++|+.+. .+..+
T Consensus 209 D~a~a~~~~~~~-~-------~~-~~~~~~~-~--~~~s~~e~~~~i~~~~g 248 (328)
T TIGR03466 209 DVAEGHLLALER-G-------RI-GERYILG-G--ENLTLKQILDKLAEITG 248 (328)
T ss_pred HHHHHHHHHHhC-C-------CC-CceEEec-C--CCcCHHHHHHHHHHHhC
Confidence 9999 7666532 1 22 4578774 4 57999999999 77766
No 38
>PLN02240 UDP-glucose 4-epimerase
Probab=98.03 E-value=1.5e-05 Score=74.81 Aligned_cols=123 Identities=14% Similarity=0.009 Sum_probs=78.0
Q ss_pred CcHHHHHHHHHHHHHHHhc---CCCCEEEecccEEeeccCCCcccccc-CC-CChHHHHHHHhhccee--eecc------
Q psy3027 6 PNTYTFTKALAEDVLCKEG---KGLPLAVLRPAVIVSTYREPVRGWID-NV-YGPIGMLVGIATGVLH--THLI------ 72 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~---~~lPv~IvRPsiV~~~~~eP~pGw~d-~~-~g~~~~~~~~~~G~l~--~~~~------ 72 (300)
.+.|+.||..+|+++.+.. .+++++++||+.|+|......-|.-. .+ .+...++.....|... .+.+
T Consensus 153 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 232 (352)
T PLN02240 153 TNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTK 232 (352)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCC
Confidence 4789999999999998652 47999999999888865321112110 00 1111223223223211 1222
Q ss_pred CCCcccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 73 NLNTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 73 ~~~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
+++..-|.|.||++++ ++.++........ .. ..+||++++ .++|++|+.+. .+...
T Consensus 233 ~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~---~~-~~~yni~~~--~~~s~~el~~~i~~~~g 290 (352)
T PLN02240 233 DGTGVRDYIHVMDLADGHIAALRKLFTDPD---IG-CEAYNLGTG--KGTSVLEMVAAFEKASG 290 (352)
T ss_pred CCCEEEeeEEHHHHHHHHHHHHhhhhhccC---CC-CceEEccCC--CcEeHHHHHHHHHHHhC
Confidence 4567789999999999 7766643211001 22 469999988 78999999999 77665
No 39
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.03 E-value=1.7e-05 Score=72.84 Aligned_cols=132 Identities=16% Similarity=0.057 Sum_probs=93.7
Q ss_pred cHHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCCccc-cccCCCChHHHHHHHhhcceee--ecc------CCC
Q psy3027 7 NTYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREPVRG-WIDNVYGPIGMLVGIATGVLHT--HLI------NLN 75 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP~pG-w~d~~~g~~~~~~~~~~G~l~~--~~~------~~~ 75 (300)
|+|+.||.+.|++++.. ..++.++|+|==-+.|+..+..-| |-.+.+....++..+..|.... +.| |+.
T Consensus 140 NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT 219 (329)
T COG1087 140 NPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGT 219 (329)
T ss_pred CcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCC
Confidence 79999999999999988 458999999999999888754444 4445544445555555565442 333 455
Q ss_pred cccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCCcccccccc
Q psy3027 76 TVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWPTIRAIWYF 146 (300)
Q Consensus 76 ~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P~~~~l~~P 146 (300)
.+=|.|.|.+.++ -++|.-.... . +. ..+||+.++ +..|..|+++. .+..+...|.+-.-+.|
T Consensus 220 ~iRDYIHV~DLA~aH~~Al~~L~~--~---g~-~~~~NLG~G--~G~SV~evi~a~~~vtg~~ip~~~~~RR~ 284 (329)
T COG1087 220 CIRDYIHVDDLADAHVLALKYLKE--G---GS-NNIFNLGSG--NGFSVLEVIEAAKKVTGRDIPVEIAPRRA 284 (329)
T ss_pred eeeeeeehhHHHHHHHHHHHHHHh--C---Cc-eeEEEccCC--CceeHHHHHHHHHHHhCCcCceeeCCCCC
Confidence 6669999999999 6666543332 1 33 469999999 88999999999 77666355554333333
No 40
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=98.02 E-value=5.9e-06 Score=72.57 Aligned_cols=95 Identities=20% Similarity=0.192 Sum_probs=68.8
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChH-HHHHHHhhcceeeeccCCCcccceecc
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPI-GMLVGIATGVLHTHLINLNTVTDMVPS 83 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~-~~~~~~~~G~l~~~~~~~~~~~diVPV 83 (300)
+.|..+|..+|+++.++. .+++++|+||+.|+|.. .|- .+..+.. .++..+.+|.--.++++++...|++.|
T Consensus 138 ~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 212 (236)
T PF01370_consen 138 SPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPG-NPN----NNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHV 212 (236)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTT-SSS----SSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEH
T ss_pred ccccccccccccccccccccccccccccccccccccc-ccc----cccccccchhhHHhhcCCcccccCCCCCccceEEH
Confidence 569999999999999884 38999999999999977 111 1122222 344455567644677889999999999
Q ss_pred ccccc-cccccccccCCCCCCCCCCCcEEEee
Q psy3027 84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFV 114 (300)
Q Consensus 84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~ 114 (300)
|++++ ++.++.+.. .. ..+||++
T Consensus 213 ~D~a~~~~~~~~~~~-------~~-~~~yNig 236 (236)
T PF01370_consen 213 DDLAEAIVAALENPK-------AA-GGIYNIG 236 (236)
T ss_dssp HHHHHHHHHHHHHSC-------TT-TEEEEES
T ss_pred HHHHHHHHHHHhCCC-------CC-CCEEEeC
Confidence 99999 766663222 13 5799974
No 41
>PLN02650 dihydroflavonol-4-reductase
Probab=97.99 E-value=2.3e-05 Score=73.79 Aligned_cols=106 Identities=17% Similarity=0.171 Sum_probs=68.2
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHH--hhcceeeeccCCCcccceec
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGI--ATGVLHTHLINLNTVTDMVP 82 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~--~~G~l~~~~~~~~~~~diVP 82 (300)
+.|+.||..+|+++..+. .+++++|+||+.|+|....+. . +..++... ..|... ..+.. ...|+|.
T Consensus 161 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~------~--~~~~~~~~~~~~~~~~-~~~~~-~~r~~v~ 230 (351)
T PLN02650 161 WMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTS------M--PPSLITALSLITGNEA-HYSII-KQGQFVH 230 (351)
T ss_pred chHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCC------C--CccHHHHHHHhcCCcc-ccCcC-CCcceee
Confidence 479999999999998873 389999999999999755321 1 11122111 112111 11111 2359999
Q ss_pred cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
||++++ ++.++.. . .. ..+| ++++ .++|+.|+.+. .+...
T Consensus 231 V~Dva~a~~~~l~~-~-------~~-~~~~-i~~~--~~~s~~el~~~i~~~~~ 272 (351)
T PLN02650 231 LDDLCNAHIFLFEH-P-------AA-EGRY-ICSS--HDATIHDLAKMLREKYP 272 (351)
T ss_pred HHHHHHHHHHHhcC-c-------Cc-CceE-EecC--CCcCHHHHHHHHHHhCc
Confidence 999999 7666531 1 11 3478 4555 56899999999 77554
No 42
>KOG0747|consensus
Probab=97.98 E-value=1.4e-05 Score=72.60 Aligned_cols=115 Identities=16% Similarity=0.044 Sum_probs=82.3
Q ss_pred CcHHHHHHHHHHHHHHHhcC--CCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecc
Q psy3027 6 PNTYTFTKALAEDVLCKEGK--GLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPS 83 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~~--~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPV 83 (300)
-|.|..||+.||++|+.+.. ++|++|+|-+-|+|..+-|.- ..--++.....|---++.|++...-+-+.|
T Consensus 154 tnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~k-------lipkFi~l~~~~~~~~i~g~g~~~rs~l~v 226 (331)
T KOG0747|consen 154 TNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEK-------LIPKFIKLAMRGKEYPIHGDGLQTRSYLYV 226 (331)
T ss_pred CCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHH-------HhHHHHHHHHhCCCcceecCcccceeeEeH
Confidence 37999999999999999943 899999999999998775520 000122222223333577788888899999
Q ss_pred ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCC
Q psy3027 84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWP 138 (300)
Q Consensus 84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P 138 (300)
+.+++ +-+++.+ +. . +.|||+.+. -+++..|+.+. .+.+..+.|
T Consensus 227 eD~~ea~~~v~~K-g~-------~-geIYNIgtd--~e~~~~~l~k~i~eli~~~~~ 272 (331)
T KOG0747|consen 227 EDVSEAFKAVLEK-GE-------L-GEIYNIGTD--DEMRVIDLAKDICELFEKRLP 272 (331)
T ss_pred HHHHHHHHHHHhc-CC-------c-cceeeccCc--chhhHHHHHHHHHHHHHHhcc
Confidence 99999 6555433 32 2 679999976 78899999888 766652333
No 43
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=97.98 E-value=2.2e-05 Score=72.56 Aligned_cols=105 Identities=15% Similarity=0.122 Sum_probs=63.4
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccC--CCcccceeccc
Q psy3027 7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLIN--LNTVTDMVPST 84 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~--~~~~~diVPVD 84 (300)
|.|+.||..+|+++..+.. +.+|+||+.|+|.... ++ ...++.....|---.+.++ ++..-+..-+|
T Consensus 126 ~~Yg~sK~~~E~~~~~~~~--~~~ilR~~~vyGp~~~-------~~--~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d 194 (299)
T PRK09987 126 NVYGETKLAGEKALQEHCA--KHLIFRTSWVYAGKGN-------NF--AKTMLRLAKEREELSVINDQFGAPTGAELLAD 194 (299)
T ss_pred CHHHHHHHHHHHHHHHhCC--CEEEEecceecCCCCC-------CH--HHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHH
Confidence 7899999999999987643 6799999999985431 11 1122222222322123333 22221223366
Q ss_pred cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHc
Q psy3027 85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVC 133 (300)
Q Consensus 85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~ 133 (300)
.++. +..+. ... .. ..+||++++ +++|+.|+.+. .+..
T Consensus 195 ~~~~~~~~~~-~~~-------~~-~giyni~~~--~~~s~~e~~~~i~~~~ 234 (299)
T PRK09987 195 CTAHAIRVAL-NKP-------EV-AGLYHLVAS--GTTTWHDYAALVFEEA 234 (299)
T ss_pred HHHHHHHHhh-ccC-------CC-CCeEEeeCC--CCccHHHHHHHHHHHH
Confidence 6666 44333 111 12 359999998 78999999998 6643
No 44
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=97.97 E-value=4e-06 Score=77.29 Aligned_cols=111 Identities=15% Similarity=0.117 Sum_probs=70.5
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027 7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS 86 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v 86 (300)
|.|+.||.++|+.|.+... -..|+|+|.|+|.....+..| ++-....|- .+....+.....+.|+.+
T Consensus 123 ~~YG~~K~~~E~~v~~~~~--~~~IlR~~~~~g~~~~~~~~~---------~~~~~~~~~--~i~~~~d~~~~p~~~~dl 189 (286)
T PF04321_consen 123 NVYGRSKLEGEQAVRAACP--NALILRTSWVYGPSGRNFLRW---------LLRRLRQGE--PIKLFDDQYRSPTYVDDL 189 (286)
T ss_dssp SHHHHHHHHHHHHHHHH-S--SEEEEEE-SEESSSSSSHHHH---------HHHHHHCTS--EEEEESSCEE--EEHHHH
T ss_pred CHHHHHHHHHHHHHHHhcC--CEEEEecceecccCCCchhhh---------HHHHHhcCC--eeEeeCCceeCCEEHHHH
Confidence 7899999999999998654 799999999999744323222 222222333 233345777789999999
Q ss_pred cc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCC
Q psy3027 87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWP 138 (300)
Q Consensus 87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P 138 (300)
|. ++..+.+.... . .. ..|||++++ .++|+.|+.+. .+.++ ..+
T Consensus 190 A~~i~~l~~~~~~~-~---~~-~Giyh~~~~--~~~S~~e~~~~i~~~~~-~~~ 235 (286)
T PF04321_consen 190 ARVILELIEKNLSG-A---SP-WGIYHLSGP--ERVSRYEFAEAIAKILG-LDP 235 (286)
T ss_dssp HHHHHHHHHHHHH--G---GG--EEEE---B--S-EEHHHHHHHHHHHHT-HCT
T ss_pred HHHHHHHHHhcccc-c---cc-ceeEEEecC--cccCHHHHHHHHHHHhC-CCC
Confidence 99 76666432210 0 12 479999998 78999999999 88777 443
No 45
>PLN02583 cinnamoyl-CoA reductase
Probab=97.95 E-value=2.4e-05 Score=72.24 Aligned_cols=103 Identities=11% Similarity=0.032 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027 8 TYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV 85 (300)
Q Consensus 8 tYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~ 85 (300)
.|..||.+||+++.++ ..+++++++||+.|.|....+.. . ...|... . -++...++|.||+
T Consensus 162 ~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~----------~----~~~~~~~-~--~~~~~~~~v~V~D 224 (297)
T PLN02583 162 WHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN----------P----YLKGAAQ-M--YENGVLVTVDVNF 224 (297)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch----------h----hhcCCcc-c--CcccCcceEEHHH
Confidence 5999999999999775 34899999999999986543211 0 1111111 1 1223457999999
Q ss_pred ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCCc
Q psy3027 86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWPT 139 (300)
Q Consensus 86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P~ 139 (300)
||+ +++|+.+ .. . ...|.|+++ +..+++++.++ ++.+- .+|.
T Consensus 225 va~a~~~al~~-~~------~--~~r~~~~~~--~~~~~~~~~~~~~~~~p-~~~~ 268 (297)
T PLN02583 225 LVDAHIRAFED-VS------S--YGRYLCFNH--IVNTEEDAVKLAQMLSP-LIPS 268 (297)
T ss_pred HHHHHHHHhcC-cc------c--CCcEEEecC--CCccHHHHHHHHHHhCC-CCCC
Confidence 999 7777632 11 2 336888876 44567889999 77655 5554
No 46
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=97.93 E-value=3.5e-05 Score=71.90 Aligned_cols=121 Identities=16% Similarity=0.100 Sum_probs=75.7
Q ss_pred CcHHHHHHHHHHHHHHHhc---CCCCEEEecccEEeeccCCCccccccC--CCChHHHHHHHhhccee--eecc------
Q psy3027 6 PNTYTFTKALAEDVLCKEG---KGLPLAVLRPAVIVSTYREPVRGWIDN--VYGPIGMLVGIATGVLH--THLI------ 72 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~---~~lPv~IvRPsiV~~~~~eP~pGw~d~--~~g~~~~~~~~~~G~l~--~~~~------ 72 (300)
.+.|..||..+|+++.++. .+++++|+||+.|+|....-+-|--+. .......+.....|... .+.+
T Consensus 146 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (338)
T PRK10675 146 QSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTE 225 (338)
T ss_pred CChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCC
Confidence 4689999999999998763 479999999999988542101010000 00111222222222111 1111
Q ss_pred CCCcccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 73 NLNTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 73 ~~~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
+++...|+|.||.+++ ++.++..... . .. ..+||++++ .++|+.|+.+. .+..+
T Consensus 226 ~g~~~~~~v~v~D~a~~~~~~~~~~~~--~---~~-~~~~ni~~~--~~~s~~e~~~~i~~~~g 281 (338)
T PRK10675 226 DGTGVRDYIHVMDLADGHVAAMEKLAN--K---PG-VHIYNLGAG--VGSSVLDVVNAFSKACG 281 (338)
T ss_pred CCcEEEeeEEHHHHHHHHHHHHHhhhc--c---CC-CceEEecCC--CceeHHHHHHHHHHHhC
Confidence 4566789999999999 7666532111 1 12 469999987 78999999999 77665
No 47
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=97.93 E-value=2.2e-05 Score=73.73 Aligned_cols=110 Identities=16% Similarity=-0.034 Sum_probs=76.4
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCC-CC-hHHHHHHHhhcc-eeeeccCCCccccee
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNV-YG-PIGMLVGIATGV-LHTHLINLNTVTDMV 81 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~-~g-~~~~~~~~~~G~-l~~~~~~~~~~~diV 81 (300)
|.|+.||..+|++++.++ .++++++.|+.-++|... | +++ .. ....+.....|. .....++++..-|+|
T Consensus 154 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i 227 (343)
T TIGR01472 154 SPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRR----G--ENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWG 227 (343)
T ss_pred ChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCC----C--ccccchHHHHHHHHHHcCCCCceeeCCCccccCce
Confidence 689999999999998874 378999888876665431 1 111 11 111222233343 234557888899999
Q ss_pred ccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 82 PSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 82 PVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
.||++|+ ++.++. . .. ..+||++++ .++|+.|+.+. .+..+
T Consensus 228 ~V~D~a~a~~~~~~-~--------~~-~~~yni~~g--~~~s~~e~~~~i~~~~g 270 (343)
T TIGR01472 228 HAKDYVEAMWLMLQ-Q--------DK-PDDYVIATG--ETHSVREFVEVSFEYIG 270 (343)
T ss_pred eHHHHHHHHHHHHh-c--------CC-CccEEecCC--CceeHHHHHHHHHHHcC
Confidence 9999999 776652 1 12 358999998 78999999999 77666
No 48
>PLN00016 RNA-binding protein; Provisional
Probab=97.93 E-value=3.7e-05 Score=73.41 Aligned_cols=103 Identities=14% Similarity=0.049 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccccc-cc
Q psy3027 12 TKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSDG-PS 90 (300)
Q Consensus 12 TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~vvn-~i 90 (300)
+|..+|+.+++ .++|++|+||+.|+|..... + ....++.....|..-.++++++...+++.||++++ ++
T Consensus 188 sK~~~E~~l~~--~~l~~~ilRp~~vyG~~~~~------~--~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~ 257 (378)
T PLN00016 188 GHLEVEAYLQK--LGVNWTSFRPQYIYGPGNNK------D--CEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFA 257 (378)
T ss_pred hHHHHHHHHHH--cCCCeEEEeceeEECCCCCC------c--hHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHH
Confidence 89999999875 48999999999999865421 0 00112222333432245667788889999999999 66
Q ss_pred cccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 91 EGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 91 ~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
.++.. . . .. ..+||++++ .++|+.|+.+. .+..+
T Consensus 258 ~~l~~-~---~---~~-~~~yni~~~--~~~s~~el~~~i~~~~g 292 (378)
T PLN00016 258 LVVGN-P---K---AA-GQIFNIVSD--RAVTFDGMAKACAKAAG 292 (378)
T ss_pred HHhcC-c---c---cc-CCEEEecCC--CccCHHHHHHHHHHHhC
Confidence 55532 1 1 23 579999987 78999999999 77766
No 49
>PLN02686 cinnamoyl-CoA reductase
Probab=97.91 E-value=3.3e-05 Score=73.66 Aligned_cols=107 Identities=16% Similarity=0.037 Sum_probs=71.4
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST 84 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD 84 (300)
+.|+.||..+|+++..+. .+++++++||+.|+|....+. .+..++ ....|.. .+.+++ ..+.|.||
T Consensus 214 ~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~--------~~~~~~-~~~~g~~-~~~g~g--~~~~v~V~ 281 (367)
T PLN02686 214 LWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRR--------NSTATI-AYLKGAQ-EMLADG--LLATADVE 281 (367)
T ss_pred chHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCC--------CChhHH-HHhcCCC-ccCCCC--CcCeEEHH
Confidence 469999999999998763 489999999999999643210 122222 2223432 233333 34699999
Q ss_pred cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
.|++ +++++..... . .. ..+| ++++ .++++.|+.+. .+..+
T Consensus 282 Dva~A~~~al~~~~~--~---~~-~~~y-i~~g--~~~s~~e~~~~i~~~~g 324 (367)
T PLN02686 282 RLAEAHVCVYEAMGN--K---TA-FGRY-ICFD--HVVSREDEAEELARQIG 324 (367)
T ss_pred HHHHHHHHHHhccCC--C---CC-CCcE-EEeC--CCccHHHHHHHHHHHcC
Confidence 9999 7766632111 1 12 4578 7776 67999999999 77765
No 50
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.83 E-value=0.00019 Score=66.72 Aligned_cols=102 Identities=15% Similarity=0.119 Sum_probs=68.1
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027 7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS 86 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v 86 (300)
..|..+|..+|+.+++ .++|++|+||+.+++.. +.. .....-.+. ......++...+.|.||++
T Consensus 119 ~~~~~~K~~~e~~l~~--~~l~~tilRp~~~~~~~-------~~~------~~~~~~~~~-~~~~~~~~~~~~~i~v~Dv 182 (317)
T CHL00194 119 IPLMKLKSDIEQKLKK--SGIPYTIFRLAGFFQGL-------ISQ------YAIPILEKQ-PIWITNESTPISYIDTQDA 182 (317)
T ss_pred ChHHHHHHHHHHHHHH--cCCCeEEEeecHHhhhh-------hhh------hhhhhccCC-ceEecCCCCccCccCHHHH
Confidence 5689999999999875 58999999999554211 000 000000111 1222345666799999999
Q ss_pred cc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
++ +..++.. .. .. ..+||++++ .++|++|+.+. .+..+
T Consensus 183 a~~~~~~l~~-~~------~~-~~~~ni~g~--~~~s~~el~~~~~~~~g 222 (317)
T CHL00194 183 AKFCLKSLSL-PE------TK-NKTFPLVGP--KSWNSSEIISLCEQLSG 222 (317)
T ss_pred HHHHHHHhcC-cc------cc-CcEEEecCC--CccCHHHHHHHHHHHhC
Confidence 99 6555421 11 23 579999988 78999999999 87766
No 51
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=97.80 E-value=8.2e-05 Score=67.49 Aligned_cols=105 Identities=12% Similarity=-0.004 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027 8 TYTFTKALAEDVLCKEG-KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS 86 (300)
Q Consensus 8 tYt~TK~~aE~lv~~~~-~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v 86 (300)
.|..+|...|+.+.... .++|++|+||+.|+|... |++. .++.....+. ....++++...|.|.||.+
T Consensus 135 ~~~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~----~~~~------~~~~~~~~~~-~~~~g~~~~~~~~i~v~Dv 203 (292)
T TIGR01777 135 FLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKG----GALA------KMLPPFRLGL-GGPLGSGRQWFSWIHIEDL 203 (292)
T ss_pred hHHHHHHHHHHHhhhchhcCCceEEEeeeeEECCCc----chhH------HHHHHHhcCc-ccccCCCCcccccEeHHHH
Confidence 34566767787766543 479999999999999532 2211 1111111111 1124567888899999999
Q ss_pred cc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
+. +..++. .. .. ..+||++++ .++|+.|+.+. .+..+
T Consensus 204 a~~i~~~l~-~~-------~~-~g~~~~~~~--~~~s~~di~~~i~~~~g 242 (292)
T TIGR01777 204 VQLILFALE-NA-------SI-SGPVNATAP--EPVRNKEFAKALARALH 242 (292)
T ss_pred HHHHHHHhc-Cc-------cc-CCceEecCC--CccCHHHHHHHHHHHhC
Confidence 99 665552 11 22 458999987 78999999999 77666
No 52
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=97.74 E-value=6.7e-05 Score=70.77 Aligned_cols=108 Identities=16% Similarity=0.115 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCC-ccccccCCCChHHHHHH--HhhcceeeeccC---CCcccc
Q psy3027 8 TYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREP-VRGWIDNVYGPIGMLVG--IATGVLHTHLIN---LNTVTD 79 (300)
Q Consensus 8 tYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP-~pGw~d~~~g~~~~~~~--~~~G~l~~~~~~---~~~~~d 79 (300)
.|+.||.+||+++.++. .+++++|+||+.|+|....+ +|.++. .+.. .|.+......+. .....|
T Consensus 175 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~-------~~~~~~~g~~~~~~~~~~~~~~~~~~d 247 (353)
T PLN02896 175 VYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQ-------VLLSPITGDSKLFSILSAVNSRMGSIA 247 (353)
T ss_pred cHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHH-------HHHHHhcCCccccccccccccccCcee
Confidence 79999999999998873 48999999999999976543 222221 1111 111111111111 111348
Q ss_pred eeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 80 MVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 80 iVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
+|.||.+|+ ++.++.. . .. ..+|++ ++ .+++++|+.+. .+...
T Consensus 248 fi~v~Dva~a~~~~l~~-~-------~~-~~~~~~-~~--~~~s~~el~~~i~~~~~ 292 (353)
T PLN02896 248 LVHIEDICDAHIFLMEQ-T-------KA-EGRYIC-CV--DSYDMSELINHLSKEYP 292 (353)
T ss_pred EEeHHHHHHHHHHHHhC-C-------Cc-CccEEe-cC--CCCCHHHHHHHHHHhCC
Confidence 999999999 7766531 1 11 246864 44 57999999999 77654
No 53
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=97.61 E-value=0.00017 Score=67.49 Aligned_cols=109 Identities=15% Similarity=-0.092 Sum_probs=73.6
Q ss_pred CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHH----HHHhhcc-eeeeccCCCccc
Q psy3027 6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGML----VGIATGV-LHTHLINLNTVT 78 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~----~~~~~G~-l~~~~~~~~~~~ 78 (300)
.+.|..||..+|+++..++ .+++++..|+.-+++. |..+++- ...+ ...-.|. .....++++..-
T Consensus 159 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~g~~~r 230 (340)
T PLN02653 159 RSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESP------RRGENFV--TRKITRAVGRIKVGLQKKLFLGNLDASR 230 (340)
T ss_pred CChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCC------CCCcccc--hhHHHHHHHHHHcCCCCceEeCCCccee
Confidence 3579999999999998763 3677777777665553 2212211 1111 1122333 223457788889
Q ss_pred ceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 79 DMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 79 diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
|++.||.+++ ++.++.. .. ..+||++++ +++|+.|+.+. .+..+
T Consensus 231 d~i~v~D~a~a~~~~~~~---------~~-~~~yni~~g--~~~s~~e~~~~i~~~~g 276 (340)
T PLN02653 231 DWGFAGDYVEAMWLMLQQ---------EK-PDDYVVATE--ESHTVEEFLEEAFGYVG 276 (340)
T ss_pred cceeHHHHHHHHHHHHhc---------CC-CCcEEecCC--CceeHHHHHHHHHHHcC
Confidence 9999999999 7766521 12 358999988 88999999999 77665
No 54
>KOG1502|consensus
Probab=97.61 E-value=0.00028 Score=65.84 Aligned_cols=111 Identities=18% Similarity=0.230 Sum_probs=82.6
Q ss_pred cHHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027 7 NTYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST 84 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD 84 (300)
+.|..||.+||+...+. ..+++++.+-|+.|.|+.-.| .++...-.++..-+|.....+ +....+|.||
T Consensus 162 ~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~------~l~~s~~~~l~~i~G~~~~~~---n~~~~~VdVr 232 (327)
T KOG1502|consen 162 LWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQP------SLNSSLNALLKLIKGLAETYP---NFWLAFVDVR 232 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCccc------ccchhHHHHHHHHhcccccCC---CCceeeEeHH
Confidence 57999999999999988 358999999999999966554 456656666677777654443 3334489999
Q ss_pred cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCCc
Q psy3027 85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWPT 139 (300)
Q Consensus 85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P~ 139 (300)
+||+ .+.|..+. .. ..-|+|++. + .+++|+.+. .+.+. .+|.
T Consensus 233 DVA~AHv~a~E~~--------~a-~GRyic~~~--~-~~~~ei~~~l~~~~P-~~~i 276 (327)
T KOG1502|consen 233 DVALAHVLALEKP--------SA-KGRYICVGE--V-VSIKEIADILRELFP-DYPI 276 (327)
T ss_pred HHHHHHHHHHcCc--------cc-CceEEEecC--c-ccHHHHHHHHHHhCC-CCCC
Confidence 9999 77776322 22 458999886 3 349999999 87766 6663
No 55
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.57 E-value=0.00016 Score=69.57 Aligned_cols=105 Identities=10% Similarity=0.062 Sum_probs=72.0
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCc-ccceecccc
Q psy3027 7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNT-VTDMVPSTV 85 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~-~~diVPVD~ 85 (300)
+.|..+|..+|+.+.++..+++++|+||+.+.+. +++ .+.....|..-.+.++++. ..+.|.||+
T Consensus 190 ~~~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~----~~~----------~~~~~~~g~~~~~~GdG~~~~~~~I~v~D 255 (390)
T PLN02657 190 LEFQRAKLKFEAELQALDSDFTYSIVRPTAFFKS----LGG----------QVEIVKDGGPYVMFGDGKLCACKPISEAD 255 (390)
T ss_pred hHHHHHHHHHHHHHHhccCCCCEEEEccHHHhcc----cHH----------HHHhhccCCceEEecCCcccccCceeHHH
Confidence 4688999999999876557999999999987752 211 1222223433335566654 346799999
Q ss_pred ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
++. ++.++.+. . .. ..+||+.++ ..++|++|+.+. .+..+
T Consensus 256 lA~~i~~~~~~~----~---~~-~~~~~Iggp-~~~~S~~Eia~~l~~~lG 297 (390)
T PLN02657 256 LASFIADCVLDE----S---KI-NKVLPIGGP-GKALTPLEQGEMLFRILG 297 (390)
T ss_pred HHHHHHHHHhCc----c---cc-CCEEEcCCC-CcccCHHHHHHHHHHHhC
Confidence 998 66655321 1 23 579999863 247899999999 88777
No 56
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=97.55 E-value=0.00017 Score=66.21 Aligned_cols=114 Identities=17% Similarity=0.087 Sum_probs=86.0
Q ss_pred cHHHHHHHHHHHHHHHhcC--CCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027 7 NTYTFTKALAEDVLCKEGK--GLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST 84 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~~--~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD 84 (300)
++|.-|||-|.+||+.+.. +||++|.|+|--+|+.+.|= .+ -| -++.-+-.|.--.++|++..+=|-+.|+
T Consensus 150 SPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpE-----Kl-IP-~~I~nal~g~~lpvYGdG~~iRDWl~Ve 222 (340)
T COG1088 150 SPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPE-----KL-IP-LMIINALLGKPLPVYGDGLQIRDWLYVE 222 (340)
T ss_pred CCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCch-----hh-hH-HHHHHHHcCCCCceecCCcceeeeEEeH
Confidence 6799999999999999854 99999999999999998762 00 01 1223345577668999999999999999
Q ss_pred cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCC
Q psy3027 85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWP 138 (300)
Q Consensus 85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P 138 (300)
.-++ +-... ..+ .- +.+||+.++ |..+--|+.+. .+...+..|
T Consensus 223 Dh~~ai~~Vl-~kg-------~~-GE~YNIgg~--~E~~Nlevv~~i~~~l~~~~~ 267 (340)
T COG1088 223 DHCRAIDLVL-TKG-------KI-GETYNIGGG--NERTNLEVVKTICELLGKDKP 267 (340)
T ss_pred hHHHHHHHHH-hcC-------cC-CceEEeCCC--ccchHHHHHHHHHHHhCcccc
Confidence 9998 43322 222 23 679999988 77899999999 777773444
No 57
>PLN02778 3,5-epimerase/4-reductase
Probab=97.38 E-value=0.0005 Score=63.64 Aligned_cols=98 Identities=19% Similarity=0.161 Sum_probs=63.1
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027 7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS 86 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v 86 (300)
|.|+.||.++|+++..+. ...++|++++.+... ..+..++..+..|--....+ .|.+.||.+
T Consensus 139 s~Yg~sK~~~E~~~~~y~---~~~~lr~~~~~~~~~----------~~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~ 200 (298)
T PLN02778 139 SFYSKTKAMVEELLKNYE---NVCTLRVRMPISSDL----------SNPRNFITKITRYEKVVNIP-----NSMTILDEL 200 (298)
T ss_pred CchHHHHHHHHHHHHHhh---ccEEeeecccCCccc----------ccHHHHHHHHHcCCCeeEcC-----CCCEEHHHH
Confidence 789999999999998875 467899977554311 01112222222221101111 268888999
Q ss_pred cc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
++ ++.+.. . +. ..+||++++ .++|+.|+.+. .+...
T Consensus 201 v~al~~~l~-~--------~~-~g~yNigs~--~~iS~~el~~~i~~~~~ 238 (298)
T PLN02778 201 LPISIEMAK-R--------NL-TGIYNFTNP--GVVSHNEILEMYRDYID 238 (298)
T ss_pred HHHHHHHHh-C--------CC-CCeEEeCCC--CcccHHHHHHHHHHHhC
Confidence 98 665541 1 12 359999887 68999999998 87766
No 58
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=97.38 E-value=0.00028 Score=64.72 Aligned_cols=103 Identities=15% Similarity=0.157 Sum_probs=71.6
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHH-HhhcceeeeccCCCcccceecccc
Q psy3027 7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVG-IATGVLHTHLINLNTVTDMVPSTV 85 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~-~~~G~l~~~~~~~~~~~diVPVD~ 85 (300)
|-|+.||.++|+.|.++. =-..|+|.|+|++.....| ...|+- ...|. .+.+-.|....-+++..
T Consensus 122 nvYG~sKl~GE~~v~~~~--~~~~I~Rtswv~g~~g~nF----------v~tml~la~~~~--~l~vv~Dq~gsPt~~~d 187 (281)
T COG1091 122 NVYGRSKLAGEEAVRAAG--PRHLILRTSWVYGEYGNNF----------VKTMLRLAKEGK--ELKVVDDQYGSPTYTED 187 (281)
T ss_pred hhhhHHHHHHHHHHHHhC--CCEEEEEeeeeecCCCCCH----------HHHHHHHhhcCC--ceEEECCeeeCCccHHH
Confidence 679999999999999875 3468999999999765222 222222 22332 22333567777788888
Q ss_pred ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
++. +...+... .. ..+||++++ ..+||-|+.+. .+..+
T Consensus 188 lA~~i~~ll~~~--------~~-~~~yH~~~~--g~~Swydfa~~I~~~~~ 227 (281)
T COG1091 188 LADAILELLEKE--------KE-GGVYHLVNS--GECSWYEFAKAIFEEAG 227 (281)
T ss_pred HHHHHHHHHhcc--------cc-CcEEEEeCC--CcccHHHHHHHHHHHhC
Confidence 888 65554211 22 459999998 66899999999 77665
No 59
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=97.33 E-value=0.0006 Score=63.75 Aligned_cols=103 Identities=15% Similarity=0.107 Sum_probs=67.7
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeeccCCCccccccCCCChHHHHH-HHhhcceeeeccCCCcccce
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV-GIATGVLHTHLINLNTVTDM 80 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~-~~~~G~l~~~~~~~~~~~di 80 (300)
+.|+.||+.+|+++... ..+++++++||+.|.|+.. + ....+. ....|.-....++++..-|+
T Consensus 133 ~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~--------~---~i~~~~~~~~~~~~~~~i~~~~~~r~~ 201 (324)
T TIGR03589 133 NLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG--------S---VVPFFKSLKEEGVTELPITDPRMTRFW 201 (324)
T ss_pred CHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC--------C---cHHHHHHHHHhCCCCeeeCCCCceEee
Confidence 67999999999999663 3489999999999998421 1 122222 22234211112255666789
Q ss_pred eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHH
Q psy3027 81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATV 132 (300)
Q Consensus 81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~ 132 (300)
+.||.+|+ ++.++.. . .. ..+|+ .++ ...+..|+.+. .+.
T Consensus 202 i~v~D~a~a~~~al~~-~-------~~-~~~~~-~~~--~~~sv~el~~~i~~~ 243 (324)
T TIGR03589 202 ITLEQGVNFVLKSLER-M-------LG-GEIFV-PKI--PSMKITDLAEAMAPE 243 (324)
T ss_pred EEHHHHHHHHHHHHhh-C-------CC-CCEEc-cCC--CcEEHHHHHHHHHhh
Confidence 99999999 7666532 1 12 45784 444 45899999988 654
No 60
>PRK05865 hypothetical protein; Provisional
Probab=97.10 E-value=0.0013 Score=69.12 Aligned_cols=93 Identities=14% Similarity=0.192 Sum_probs=63.4
Q ss_pred HHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccccc-ccc
Q psy3027 13 KALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSDG-PSE 91 (300)
Q Consensus 13 K~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~vvn-~i~ 91 (300)
|..+|+++.+ .++|++|+||+.|+|... +.|+..+ .+......++.+...|+|.||++++ ++.
T Consensus 106 K~aaE~ll~~--~gl~~vILRp~~VYGP~~---~~~i~~l-----------l~~~v~~~G~~~~~~dfIhVdDVA~Ai~~ 169 (854)
T PRK05865 106 QPRVEQMLAD--CGLEWVAVRCALIFGRNV---DNWVQRL-----------FALPVLPAGYADRVVQVVHSDDAQRLLVR 169 (854)
T ss_pred HHHHHHHHHH--cCCCEEEEEeceEeCCCh---HHHHHHH-----------hcCceeccCCCCceEeeeeHHHHHHHHHH
Confidence 9999999965 489999999999998531 2222211 1111112244566679999999999 665
Q ss_pred ccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HH
Q psy3027 92 GVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-AT 131 (300)
Q Consensus 92 aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~ 131 (300)
++.... .. ..+||++++ +++|+.|+.+. .+
T Consensus 170 aL~~~~-------~~-ggvyNIgsg--~~~Si~EIae~l~~ 200 (854)
T PRK05865 170 ALLDTV-------ID-SGPVNLAAP--GELTFRRIAAALGR 200 (854)
T ss_pred HHhCCC-------cC-CCeEEEECC--CcccHHHHHHHHhh
Confidence 542111 12 469999998 78999999998 54
No 61
>KOG2865|consensus
Probab=96.56 E-value=0.0047 Score=56.61 Aligned_cols=111 Identities=20% Similarity=0.174 Sum_probs=70.8
Q ss_pred CcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027 6 PNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV 85 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~ 85 (300)
|.-|-.||+++|..|+++..+ .+|+|||-|+|+.+- +-.+...++-- .|.+.......+..=--|.|-+
T Consensus 185 ~Sr~LrsK~~gE~aVrdafPe--AtIirPa~iyG~eDr--------fln~ya~~~rk-~~~~pL~~~GekT~K~PVyV~D 253 (391)
T KOG2865|consen 185 PSRMLRSKAAGEEAVRDAFPE--ATIIRPADIYGTEDR--------FLNYYASFWRK-FGFLPLIGKGEKTVKQPVYVVD 253 (391)
T ss_pred hHHHHHhhhhhHHHHHhhCCc--ceeechhhhcccchh--------HHHHHHHHHHh-cCceeeecCCcceeeccEEEeh
Confidence 567889999999999997543 589999999998762 22222222211 2333322221122223456666
Q ss_pred ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCC
Q psy3027 86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWP 138 (300)
Q Consensus 86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P 138 (300)
|+. |+.|+-+. . .. +.+|..+.+ .-.+..|+.+. .+-.+ +.|
T Consensus 254 Vaa~IvnAvkDp-~------s~-Gktye~vGP--~~yql~eLvd~my~~~~-~~~ 297 (391)
T KOG2865|consen 254 VAAAIVNAVKDP-D------SM-GKTYEFVGP--DRYQLSELVDIMYDMAR-EWP 297 (391)
T ss_pred HHHHHHHhccCc-c------cc-CceeeecCC--chhhHHHHHHHHHHHHh-hcc
Confidence 666 76665322 1 34 789999987 66899999999 77766 655
No 62
>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional
Probab=96.43 E-value=0.0054 Score=64.48 Aligned_cols=76 Identities=12% Similarity=0.124 Sum_probs=52.8
Q ss_pred HHHHHhhcceeeeccCCCcccceeccccccc--cccccccccCCCCC-CCCCCCcEEEeeCCCCCcccHhHHHHH-HHHc
Q psy3027 58 MLVGIATGVLHTHLINLNTVTDMVPSTVSDG--PSEGVWQKKFPTSV-FRPDPIPIYNFVGSARNPISWGKLDEL-ATVC 133 (300)
Q Consensus 58 ~~~~~~~G~l~~~~~~~~~~~diVPVD~vvn--~i~aa~~~~~~~~~-~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~ 133 (300)
+.++..+|.++.+|..-...+-++|+|...| +++-.+.....-.+ .... ...--|+++.+|.+-|+-+.++ +.|.
T Consensus 236 ~~~~~a~g~~~~~p~~~~~p~~~~p~d~a~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~vwgm~~~ylm~yy 314 (1108)
T PTZ00374 236 VCLGVALGTVKHLPVGFRDPATVTPLDVALNTALLAVLLLCHGGLAECVECA-AEMQLCGAPGDNSLVWGMVAEYLMDYY 314 (1108)
T ss_pred HHHHHhhhhhhcccccCCCCceeccHHHHHHHHHHHHHHHhcCChHHHhcch-hhheeccCCccceeeHHHHHHHHHHHH
Confidence 4567788999999988888889999999999 55555432210000 0011 1234467778899999999999 8887
Q ss_pred C
Q psy3027 134 H 134 (300)
Q Consensus 134 ~ 134 (300)
+
T Consensus 315 ~ 315 (1108)
T PTZ00374 315 G 315 (1108)
T ss_pred h
Confidence 6
No 63
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=95.91 E-value=0.018 Score=59.12 Aligned_cols=97 Identities=20% Similarity=0.168 Sum_probs=57.8
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027 7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS 86 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v 86 (300)
|.|+.||..+|+++.++. ...++|++++.+.... | +..++..+.++.. .+.. + .+..-+|.+
T Consensus 510 ~~Yg~sK~~~E~~~~~~~---~~~~~r~~~~~~~~~~---~-------~~nfv~~~~~~~~-~~~v-p---~~~~~~~~~ 571 (668)
T PLN02260 510 SFYSKTKAMVEELLREYD---NVCTLRVRMPISSDLS---N-------PRNFITKISRYNK-VVNI-P---NSMTVLDEL 571 (668)
T ss_pred ChhhHHHHHHHHHHHhhh---hheEEEEEEecccCCC---C-------ccHHHHHHhccce-eecc-C---CCceehhhH
Confidence 889999999999998863 5788899988853211 1 1122222211111 1111 1 123344555
Q ss_pred cc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHc
Q psy3027 87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVC 133 (300)
Q Consensus 87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~ 133 (300)
+. ++.++ +. .. ..+||++++ .++||.|+.+. .+..
T Consensus 572 ~~~~~~l~-~~--------~~-~giyni~~~--~~~s~~e~a~~i~~~~ 608 (668)
T PLN02260 572 LPISIEMA-KR--------NL-RGIWNFTNP--GVVSHNEILEMYKDYI 608 (668)
T ss_pred HHHHHHHH-Hh--------CC-CceEEecCC--CcCcHHHHHHHHHHhc
Confidence 55 33333 11 12 469999998 68999999998 7654
No 64
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=95.02 E-value=0.052 Score=49.36 Aligned_cols=99 Identities=13% Similarity=0.177 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccccc-cc
Q psy3027 12 TKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSDG-PS 90 (300)
Q Consensus 12 TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~vvn-~i 90 (300)
.+...|+.+.+. .++|.+|+||+.++.....+. +...+ ...|.+ ..+.++...+.|.++.++. +.
T Consensus 114 ~~~~~~~~l~~~-~gi~~tilRp~~f~~~~~~~~--~~~~~---------~~~~~~--~~~~g~~~~~~v~~~Dva~~~~ 179 (285)
T TIGR03649 114 AMGQVHAHLDSL-GGVEYTVLRPTWFMENFSEEF--HVEAI---------RKENKI--YSATGDGKIPFVSADDIARVAY 179 (285)
T ss_pred hHHHHHHHHHhc-cCCCEEEEeccHHhhhhcccc--ccccc---------ccCCeE--EecCCCCccCcccHHHHHHHHH
Confidence 445556666542 489999999997764321110 00000 012332 2335677889999999999 55
Q ss_pred cccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 91 EGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 91 ~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
.+..+ . . .. ..+|+++++ .++|+.|+.+. .+..+
T Consensus 180 ~~l~~-~---~---~~-~~~~~l~g~--~~~s~~eia~~l~~~~g 214 (285)
T TIGR03649 180 RALTD-K---V---AP-NTDYVVLGP--ELLTYDDVAEILSRVLG 214 (285)
T ss_pred HHhcC-C---C---cC-CCeEEeeCC--ccCCHHHHHHHHHHHhC
Confidence 54422 1 1 23 569999987 78999999999 87776
No 65
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.71 E-value=0.078 Score=47.39 Aligned_cols=87 Identities=16% Similarity=0.177 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccccc-c
Q psy3027 11 FTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSDG-P 89 (300)
Q Consensus 11 ~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~vvn-~ 89 (300)
.+|..+|+.+++ .+++++|+||+.+.+... .| .....+. .......|..++|++ +
T Consensus 159 ~~k~~~e~~l~~--~gi~~~iirpg~~~~~~~---~~------------------~~~~~~~-~~~~~~~i~~~dvA~~~ 214 (251)
T PLN00141 159 VAKLQAEKYIRK--SGINYTIVRPGGLTNDPP---TG------------------NIVMEPE-DTLYEGSISRDQVAEVA 214 (251)
T ss_pred HHHHHHHHHHHh--cCCcEEEEECCCccCCCC---Cc------------------eEEECCC-CccccCcccHHHHHHHH
Confidence 468888888765 479999999998875321 11 1111111 111124588999999 6
Q ss_pred ccccccccCCCCCCCCCCCcEEEeeCCCCCc-ccHhHHHHH
Q psy3027 90 SEGVWQKKFPTSVFRPDPIPIYNFVGSARNP-ISWGKLDEL 129 (300)
Q Consensus 90 i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np-~t~~~~~~~ 129 (300)
..++.... .. ..++.+++...++ .|++++...
T Consensus 215 ~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~ 247 (251)
T PLN00141 215 VEALLCPE-------SS-YKVVEIVARADAPKRSYKDLFAS 247 (251)
T ss_pred HHHhcChh-------hc-CcEEEEecCCCCCchhHHHHHHH
Confidence 66553211 23 5689999877776 889888765
No 66
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=94.55 E-value=0.11 Score=47.61 Aligned_cols=87 Identities=15% Similarity=0.110 Sum_probs=61.7
Q ss_pred CCCCEEEecccEEeeccCCCccccccCCCChHHHHH-HHhhcceeeeccCCCcccceeccccccc-cccccccccCCCCC
Q psy3027 25 KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV-GIATGVLHTHLINLNTVTDMVPSTVSDG-PSEGVWQKKFPTSV 102 (300)
Q Consensus 25 ~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~-~~~~G~l~~~~~~~~~~~diVPVD~vvn-~i~aa~~~~~~~~~ 102 (300)
.+..+++.|-|+|.++.. |+.+-+. .+..|+- --.|+++.-..-|.+|++|| ++-+..+.
T Consensus 151 ~gtRvvllRtGvVLs~~G-----------GaL~~m~~~fk~glG-G~~GsGrQ~~SWIhieD~v~~I~fll~~~------ 212 (297)
T COG1090 151 LGTRVVLLRTGVVLSPDG-----------GALGKMLPLFKLGLG-GKLGSGRQWFSWIHIEDLVNAILFLLENE------ 212 (297)
T ss_pred cCceEEEEEEEEEecCCC-----------cchhhhcchhhhccC-CccCCCCceeeeeeHHHHHHHHHHHHhCc------
Confidence 488999999999998543 2222222 2222221 13467888899999999999 76665321
Q ss_pred CCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 103 FRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 103 ~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
.. ...||+|++ ||++..++.+. .+..+
T Consensus 213 --~l-sGp~N~taP--~PV~~~~F~~al~r~l~ 240 (297)
T COG1090 213 --QL-SGPFNLTAP--NPVRNKEFAHALGRALH 240 (297)
T ss_pred --CC-CCcccccCC--CcCcHHHHHHHHHHHhC
Confidence 12 358999998 99999999999 77766
No 67
>PRK12320 hypothetical protein; Provisional
Probab=94.07 E-value=0.096 Score=54.17 Aligned_cols=89 Identities=11% Similarity=-0.022 Sum_probs=58.3
Q ss_pred HHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccccc-ccccc
Q psy3027 15 LAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSDG-PSEGV 93 (300)
Q Consensus 15 ~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~vvn-~i~aa 93 (300)
.+|+++.+ .++|++|+||+.|+|....+. . ..++.......+ .+..+.+|.||++++ ++.++
T Consensus 112 ~aE~ll~~--~~~p~~ILR~~nVYGp~~~~~------~---~r~I~~~l~~~~------~~~pI~vIyVdDvv~alv~al 174 (699)
T PRK12320 112 QAETLVST--GWAPSLVIRIAPPVGRQLDWM------V---CRTVATLLRSKV------SARPIRVLHLDDLVRFLVLAL 174 (699)
T ss_pred HHHHHHHh--cCCCEEEEeCceecCCCCccc------H---hHHHHHHHHHHH------cCCceEEEEHHHHHHHHHHHH
Confidence 58988865 359999999999999643221 0 012221111111 133456799999999 76665
Q ss_pred ccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHH
Q psy3027 94 WQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATV 132 (300)
Q Consensus 94 ~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~ 132 (300)
. .. . ..+||++++ +.+|+.|+.+. ...
T Consensus 175 ~-~~-------~--~GiyNIG~~--~~~Si~el~~~i~~~ 202 (699)
T PRK12320 175 N-TD-------R--NGVVDLATP--DTTNVVTAWRLLRSV 202 (699)
T ss_pred h-CC-------C--CCEEEEeCC--CeeEHHHHHHHHHHh
Confidence 2 11 2 349999999 78999999888 654
No 68
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=93.17 E-value=0.1 Score=43.92 Aligned_cols=63 Identities=19% Similarity=0.177 Sum_probs=45.3
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027 7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS 86 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v 86 (300)
+.|...|..+|+++.+ .+++.+|+|||.+++...++.. .+....+...+.|.++.|
T Consensus 118 ~~~~~~~~~~e~~~~~--~~~~~~ivrp~~~~~~~~~~~~----------------------~~~~~~~~~~~~i~~~Dv 173 (183)
T PF13460_consen 118 PEYARDKREAEEALRE--SGLNWTIVRPGWIYGNPSRSYR----------------------LIKEGGPQGVNFISREDV 173 (183)
T ss_dssp HHHHHHHHHHHHHHHH--STSEEEEEEESEEEBTTSSSEE----------------------EESSTSTTSHCEEEHHHH
T ss_pred hhhHHHHHHHHHHHHh--cCCCEEEEECcEeEeCCCccee----------------------EEeccCCCCcCcCCHHHH
Confidence 4789999999999975 4999999999999987543110 111133445588999999
Q ss_pred cc-ccccc
Q psy3027 87 DG-PSEGV 93 (300)
Q Consensus 87 vn-~i~aa 93 (300)
+. ++.++
T Consensus 174 A~~~~~~l 181 (183)
T PF13460_consen 174 AKAIVEAL 181 (183)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88 65543
No 69
>KOG1371|consensus
Probab=93.10 E-value=0.27 Score=46.03 Aligned_cols=125 Identities=15% Similarity=0.053 Sum_probs=78.3
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccC-----CCccccccCCCChHHHHHHHhhcceeeecc------C
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYR-----EPVRGWIDNVYGPIGMLVGIATGVLHTHLI------N 73 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~-----eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~------~ 73 (300)
|.|+.||...|++..... ..+-++++|-.-++|+.- |+.+|--.|+.. .+.=.++++.--....+ +
T Consensus 151 ~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p-~v~~vaigr~~~l~v~g~d~~t~d 229 (343)
T KOG1371|consen 151 NPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLP-YVFQVAIGRRPNLQVVGRDYTTID 229 (343)
T ss_pred CcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccc-cccchhhcccccceeecCcccccC
Confidence 789999999999999883 368889999887777332 333555555542 22222333322222333 3
Q ss_pred CCcccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCCcc
Q psy3027 74 LNTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWPTI 140 (300)
Q Consensus 74 ~~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P~~ 140 (300)
++.+-|-|.|=..+. .+.|+.+... . .+ ..|||+.++ ++.+..++.+. .+..+.+.|..
T Consensus 230 gt~vrdyi~v~Dla~~h~~al~k~~~--~---~~-~~i~Nlgtg--~g~~V~~lv~a~~k~~g~~~k~~ 290 (343)
T KOG1371|consen 230 GTIVRDYIHVLDLADGHVAALGKLRG--A---AE-FGVYNLGTG--KGSSVLELVTAFEKALGVKIKKK 290 (343)
T ss_pred CCeeecceeeEehHHHHHHHhhcccc--c---hh-eeeEeecCC--CCccHHHHHHHHHHHhcCCCCcc
Confidence 455556676666677 5555543322 1 34 569999998 88889999999 65544355543
No 70
>PRK09135 pteridine reductase; Provisional
Probab=93.03 E-value=0.18 Score=44.28 Aligned_cols=36 Identities=17% Similarity=0.138 Sum_probs=30.4
Q ss_pred cHHHHHHHHHHHHHHHhc----CCCCEEEecccEEeeccC
Q psy3027 7 NTYTFTKALAEDVLCKEG----KGLPLAVLRPAVIVSTYR 42 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~----~~lPv~IvRPsiV~~~~~ 42 (300)
+.|+.||+.+|.+++... .+++++++||+.|.+...
T Consensus 154 ~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~ 193 (249)
T PRK09135 154 PVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPED 193 (249)
T ss_pred hhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccc
Confidence 689999999999997752 369999999999987654
No 71
>KOG1429|consensus
Probab=92.54 E-value=0.4 Score=44.20 Aligned_cols=111 Identities=12% Similarity=-0.032 Sum_probs=79.9
Q ss_pred cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027 7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST 84 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD 84 (300)
..|..-|..||.|+..+. .++-+.|.|+=-.+|..- -|.|+- -..-+....-++---++++++...=.+..||
T Consensus 168 ~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm----~~~dgr-vvsnf~~q~lr~epltv~g~G~qtRSF~yvs 242 (350)
T KOG1429|consen 168 SCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRM----HMDDGR-VVSNFIAQALRGEPLTVYGDGKQTRSFQYVS 242 (350)
T ss_pred hhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCcc----ccCCCh-hhHHHHHHHhcCCCeEEEcCCcceEEEEeHH
Confidence 468999999999999984 489999999998888543 244411 1112233333444446889998888999999
Q ss_pred cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
.+|+ ++..+... .. .+ +|+.++ +..|..|+.++ .+...
T Consensus 243 D~Vegll~Lm~s~--------~~-~p-vNiGnp--~e~Tm~elAemv~~~~~ 282 (350)
T KOG1429|consen 243 DLVEGLLRLMESD--------YR-GP-VNIGNP--GEFTMLELAEMVKELIG 282 (350)
T ss_pred HHHHHHHHHhcCC--------Cc-CC-cccCCc--cceeHHHHHHHHHHHcC
Confidence 9999 88776311 11 22 788887 78999999999 77654
No 72
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=92.19 E-value=0.15 Score=47.28 Aligned_cols=107 Identities=12% Similarity=0.062 Sum_probs=69.9
Q ss_pred CcHHHHHHHHHHHHHHHhcC-----CCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccce
Q psy3027 6 PNTYTFTKALAEDVLCKEGK-----GLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDM 80 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~~-----~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~di 80 (300)
-|.|+.||.+||+++..+.. +-..++||-+-|.++...-+|.|.+.+. .|---+ .-+++..==+
T Consensus 135 tnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~----------~g~PlT-vT~p~mtRff 203 (293)
T PF02719_consen 135 TNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIK----------NGGPLT-VTDPDMTRFF 203 (293)
T ss_dssp -SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHH----------TTSSEE-ECETT-EEEE
T ss_pred CcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHH----------cCCcce-eCCCCcEEEE
Confidence 48999999999999998844 4699999999999998888887765442 232111 2244544446
Q ss_pred eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
+=++-.++ ++.|+. .+. . +.||-.-.+ .|++..|+.+. .+..+
T Consensus 204 mti~EAv~Lvl~a~~-~~~-------~-geifvl~mg--~~v~I~dlA~~~i~~~g 248 (293)
T PF02719_consen 204 MTIEEAVQLVLQAAA-LAK-------G-GEIFVLDMG--EPVKILDLAEAMIELSG 248 (293)
T ss_dssp E-HHHHHHHHHHHHH-H---------T-TEEEEE-----TCEECCCHHHHHHHHTT
T ss_pred ecHHHHHHHHHHHHh-hCC-------C-CcEEEecCC--CCcCHHHHHHHHHhhcc
Confidence 67777788 665553 221 2 568877776 78999999998 76655
No 73
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=91.85 E-value=0.23 Score=43.73 Aligned_cols=110 Identities=15% Similarity=0.127 Sum_probs=66.0
Q ss_pred CCCcH-HHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCccccee-
Q psy3027 4 EWPNT-YTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMV- 81 (300)
Q Consensus 4 ~~pNt-Yt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diV- 81 (300)
.+|.. .-..|...|+.+++. ++|.+|+||++-+...-.++.++.+--. .+..-.++++.+.....+
T Consensus 113 ~~p~~~~~~~k~~ie~~l~~~--~i~~t~i~~g~f~e~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~ 180 (233)
T PF05368_consen 113 SEPEIPHFDQKAEIEEYLRES--GIPYTIIRPGFFMENLLPPFAPVVDIKK----------SKDVVTLPGPGNQKAVPVT 180 (233)
T ss_dssp STTHHHHHHHHHHHHHHHHHC--TSEBEEEEE-EEHHHHHTTTHHTTCSCC----------TSSEEEEETTSTSEEEEEE
T ss_pred ccccchhhhhhhhhhhhhhhc--cccceeccccchhhhhhhhhcccccccc----------cceEEEEccCCCccccccc
Confidence 34543 334789999998775 9999999999877655444433222111 011123555556555554
Q ss_pred ccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 82 PSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 82 PVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
..+++++ ...+..+... . .. ...+++++ ..+|++|+.+. .+..+
T Consensus 181 ~~~Dvg~~va~il~~p~~-~----~~-~~~~~~~~---~~~t~~eia~~~s~~~G 226 (233)
T PF05368_consen 181 DTRDVGRAVAAILLDPEK-H----NN-GKTIFLAG---ETLTYNEIAAILSKVLG 226 (233)
T ss_dssp HHHHHHHHHHHHHHSGGG-T----TE-EEEEEEGG---GEEEHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHcChHH-h----cC-CEEEEeCC---CCCCHHHHHHHHHHHHC
Confidence 7788888 5444432111 1 13 46777755 46899999999 77666
No 74
>KOG4288|consensus
Probab=91.70 E-value=0.16 Score=45.45 Aligned_cols=86 Identities=20% Similarity=0.068 Sum_probs=55.8
Q ss_pred CCcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcc---eeeeccCCCccccee
Q psy3027 5 WPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGV---LHTHLINLNTVTDMV 81 (300)
Q Consensus 5 ~pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~---l~~~~~~~~~~~diV 81 (300)
-|..|-.+|..||.-+.+..+ ..=.|+||+.++++ .++.|=--.+......+-..-++. ++.++.-+.....-|
T Consensus 171 i~rGY~~gKR~AE~Ell~~~~-~rgiilRPGFiyg~--R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppv 247 (283)
T KOG4288|consen 171 IPRGYIEGKREAEAELLKKFR-FRGIILRPGFIYGT--RNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPV 247 (283)
T ss_pred cchhhhccchHHHHHHHHhcC-CCceeeccceeecc--cccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCc
Confidence 366899999999999887654 77789999999998 344442222222222222223333 344555566667778
Q ss_pred ccccccc-ccccc
Q psy3027 82 PSTVSDG-PSEGV 93 (300)
Q Consensus 82 PVD~vvn-~i~aa 93 (300)
+||-|+- .+-|+
T Consensus 248 nve~VA~aal~ai 260 (283)
T KOG4288|consen 248 NVESVALAALKAI 260 (283)
T ss_pred CHHHHHHHHHHhc
Confidence 9999988 55554
No 75
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=91.30 E-value=0.95 Score=45.43 Aligned_cols=113 Identities=14% Similarity=0.090 Sum_probs=77.2
Q ss_pred CcHHHHHHHHHHHHHHHhcC-----CCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccce
Q psy3027 6 PNTYTFTKALAEDVLCKEGK-----GLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDM 80 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~~-----~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~di 80 (300)
.|.|+-||.+||.++..+.+ +--.+.||-+-|.|+...-+|=+.+- +..|- ..-.-+++..==+
T Consensus 383 tNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~Q----------I~~Gg-plTvTdp~mtRyf 451 (588)
T COG1086 383 TNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQ----------IAEGG-PLTVTDPDMTRFF 451 (588)
T ss_pred chHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHH----------HHcCC-CccccCCCceeEE
Confidence 59999999999999988744 36789999999999887655533322 22231 1112244444345
Q ss_pred eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCCccc
Q psy3027 81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWPTIR 141 (300)
Q Consensus 81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P~~~ 141 (300)
.=++-.|+ ++.|+.. + .. +.||=.-.| .|++..|+.+. .+..+ .+|..+
T Consensus 452 MTI~EAv~LVlqA~a~-~-------~g-GeifvldMG--epvkI~dLAk~mi~l~g-~~~~~d 502 (588)
T COG1086 452 MTIPEAVQLVLQAGAI-A-------KG-GEIFVLDMG--EPVKIIDLAKAMIELAG-QTPPGD 502 (588)
T ss_pred EEHHHHHHHHHHHHhh-c-------CC-CcEEEEcCC--CCeEHHHHHHHHHHHhC-CCCCCC
Confidence 55666677 6666532 2 23 568888777 79999999999 88887 777653
No 76
>PRK06482 short chain dehydrogenase; Provisional
Probab=91.05 E-value=0.41 Score=43.08 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=27.5
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~ 39 (300)
+.|+.||+..|.+++... .+++++++||+.+..
T Consensus 146 ~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t 183 (276)
T PRK06482 146 SLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPART 183 (276)
T ss_pred chhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccc
Confidence 689999999998887652 489999999998743
No 77
>PRK12829 short chain dehydrogenase; Provisional
Probab=86.29 E-value=0.43 Score=42.31 Aligned_cols=35 Identities=11% Similarity=0.201 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeeccC
Q psy3027 8 TYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTYR 42 (300)
Q Consensus 8 tYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~~ 42 (300)
.|+.+|+..|.++.... .+++++++||+.|.+...
T Consensus 159 ~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~ 198 (264)
T PRK12829 159 PYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRM 198 (264)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHH
Confidence 49999999998887652 489999999999876543
No 78
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=86.02 E-value=0.75 Score=40.48 Aligned_cols=97 Identities=8% Similarity=-0.006 Sum_probs=52.8
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeeccC-CCccccccCCCChHHHHHHHhhcceeeeccCCCcccce
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTYR-EPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDM 80 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~~-eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~di 80 (300)
+.|+.||+.+|.+++... .+++++++||+.|.+... +.++.-............ .+. ........+.
T Consensus 148 ~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~ 220 (255)
T TIGR01963 148 SAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVI---REV----MLPGQPTKRF 220 (255)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHH---HHH----HHccCccccC
Confidence 679999999898886542 389999999998875431 111110000000000000 000 0112233468
Q ss_pred eccccccc-cccccccccCCCCCCCCCCCcEEEeeCC
Q psy3027 81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGS 116 (300)
Q Consensus 81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~ 116 (300)
+.+|.+++ ++.++.+... . .. ..+|++.++
T Consensus 221 ~~~~d~a~~~~~~~~~~~~--~---~~-g~~~~~~~g 251 (255)
T TIGR01963 221 VTVDEVAETALFLASDAAA--G---IT-GQAIVLDGG 251 (255)
T ss_pred cCHHHHHHHHHHHcCcccc--C---cc-ceEEEEcCc
Confidence 99999999 7766643221 1 23 568888754
No 79
>PRK05875 short chain dehydrogenase; Provisional
Probab=84.94 E-value=1.2 Score=39.95 Aligned_cols=35 Identities=20% Similarity=0.435 Sum_probs=28.6
Q ss_pred CCcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEee
Q psy3027 5 WPNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVS 39 (300)
Q Consensus 5 ~pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~ 39 (300)
..+.|+-||+..|.+++... .++.++++||+.|..
T Consensus 155 ~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t 194 (276)
T PRK05875 155 WFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRT 194 (276)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCC
Confidence 34679999999999998752 478999999997754
No 80
>PRK06914 short chain dehydrogenase; Provisional
Probab=84.79 E-value=0.5 Score=42.53 Aligned_cols=36 Identities=17% Similarity=0.177 Sum_probs=29.0
Q ss_pred CcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeecc
Q psy3027 6 PNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~ 41 (300)
.+.|+-||+..|.+++..+ .+++++++||+.+....
T Consensus 150 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 190 (280)
T PRK06914 150 LSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNI 190 (280)
T ss_pred CchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccch
Confidence 3579999999999887642 38999999999886643
No 81
>PRK12746 short chain dehydrogenase; Provisional
Probab=81.09 E-value=0.99 Score=39.84 Aligned_cols=35 Identities=11% Similarity=0.241 Sum_probs=27.9
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~ 41 (300)
..|+.||+..|.+++.. ..++++++++|+.|.+..
T Consensus 158 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~ 197 (254)
T PRK12746 158 IAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDI 197 (254)
T ss_pred cchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcc
Confidence 46999999999987654 247999999999886543
No 82
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=80.79 E-value=0.65 Score=41.14 Aligned_cols=96 Identities=4% Similarity=-0.125 Sum_probs=53.9
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeeccC-CCccccccCCCC-hHHHHHHHhhcceeeeccCCCcccc
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTYR-EPVRGWIDNVYG-PIGMLVGIATGVLHTHLINLNTVTD 79 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~~-eP~pGw~d~~~g-~~~~~~~~~~G~l~~~~~~~~~~~d 79 (300)
+.|.-||+..|.+++... .++.++++||+.|.+... +.++........ .... .+.+........+
T Consensus 155 ~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 226 (262)
T PRK13394 155 SAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEV--------VKKVMLGKTVDGV 226 (262)
T ss_pred cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHH--------HHHHHhcCCCCCC
Confidence 579999999888876552 479999999998876432 111111111100 0000 1111122333457
Q ss_pred eeccccccc-cccccccccCCCCCCCCCCCcEEEeeCC
Q psy3027 80 MVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGS 116 (300)
Q Consensus 80 iVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~ 116 (300)
++.++.+++ ++.++..... . .. +.+|++..+
T Consensus 227 ~~~~~dva~a~~~l~~~~~~--~---~~-g~~~~~~~g 258 (262)
T PRK13394 227 FTTVEDVAQTVLFLSSFPSA--A---LT-GQSFVVSHG 258 (262)
T ss_pred CCCHHHHHHHHHHHcCcccc--C---Cc-CCEEeeCCc
Confidence 899999999 7766533221 1 23 467777654
No 83
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=80.10 E-value=1 Score=39.91 Aligned_cols=35 Identities=20% Similarity=0.294 Sum_probs=28.4
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~ 41 (300)
..|+.||+..|.+++.. ..++++.++||+.|.+..
T Consensus 151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~ 190 (257)
T PRK07067 151 SHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPM 190 (257)
T ss_pred chhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchh
Confidence 57999999988887654 348999999999987643
No 84
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=80.04 E-value=8.9 Score=33.88 Aligned_cols=103 Identities=15% Similarity=0.106 Sum_probs=64.7
Q ss_pred CcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027 6 PNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV 85 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~ 85 (300)
|..|..+|..+|+++.+ .++|.+++||+..+..... .. .......|...... +..+...|.+|.
T Consensus 115 ~~~~~~~~~~~e~~l~~--sg~~~t~lr~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~--~~~~~~~i~~~d 178 (275)
T COG0702 115 PSALARAKAAVEAALRS--SGIPYTTLRRAAFYLGAGA-----------AF-IEAAEAAGLPVIPR--GIGRLSPIAVDD 178 (275)
T ss_pred ccHHHHHHHHHHHHHHh--cCCCeEEEecCeeeeccch-----------hH-HHHHHhhCCceecC--CCCceeeeEHHH
Confidence 56799999999999987 5899999997655442221 00 22223333322222 223677888999
Q ss_pred ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
++. +..+..... .. ..+|.++.. ...+..+..+. .+...
T Consensus 179 ~a~~~~~~l~~~~-------~~-~~~~~l~g~--~~~~~~~~~~~l~~~~g 219 (275)
T COG0702 179 VAEALAAALDAPA-------TA-GRTYELAGP--EALTLAELASGLDYTIG 219 (275)
T ss_pred HHHHHHHHhcCCc-------cc-CcEEEccCC--ceecHHHHHHHHHHHhC
Confidence 888 444332111 23 579999876 66888888888 55544
No 85
>PRK08263 short chain dehydrogenase; Provisional
Probab=79.23 E-value=2.9 Score=37.57 Aligned_cols=35 Identities=14% Similarity=0.197 Sum_probs=27.7
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~ 41 (300)
..|+-||+..|.+.+.. ..++++.++||+.+....
T Consensus 147 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~ 186 (275)
T PRK08263 147 GIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDW 186 (275)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCc
Confidence 47999999988877554 248999999999876543
No 86
>KOG3019|consensus
Probab=78.21 E-value=5 Score=36.07 Aligned_cols=90 Identities=14% Similarity=0.115 Sum_probs=60.1
Q ss_pred hcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHH-HhhcceeeeccCCCcccceeccccccccccccccccCCCC
Q psy3027 23 EGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVG-IATGVLHTHLINLNTVTDMVPSTVSDGPSEGVWQKKFPTS 101 (300)
Q Consensus 23 ~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~-~~~G~l~~~~~~~~~~~diVPVD~vvn~i~aa~~~~~~~~ 101 (300)
..++..++|+|-+.|.|.-. |+.+.|.. +-+|.- --.|+++....-|.||+.+|+|..+-+..
T Consensus 168 ~~~~~r~~~iR~GvVlG~gG-----------Ga~~~M~lpF~~g~G-GPlGsG~Q~fpWIHv~DL~~li~~ale~~---- 231 (315)
T KOG3019|consen 168 ANKDVRVALIRIGVVLGKGG-----------GALAMMILPFQMGAG-GPLGSGQQWFPWIHVDDLVNLIYEALENP---- 231 (315)
T ss_pred cCcceeEEEEEEeEEEecCC-----------cchhhhhhhhhhccC-CcCCCCCeeeeeeehHHHHHHHHHHHhcC----
Confidence 34579999999999998543 44444432 222322 23457788889999999999443332111
Q ss_pred CCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027 102 VFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH 134 (300)
Q Consensus 102 ~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~ 134 (300)
.- ..|.|-+.+ ||.+..|+++. ....+
T Consensus 232 ---~v-~GViNgvAP--~~~~n~Ef~q~lg~aL~ 259 (315)
T KOG3019|consen 232 ---SV-KGVINGVAP--NPVRNGEFCQQLGSALS 259 (315)
T ss_pred ---CC-CceecccCC--CccchHHHHHHHHHHhC
Confidence 11 348888876 99999999999 66655
No 87
>PRK07074 short chain dehydrogenase; Provisional
Probab=74.99 E-value=5.4 Score=35.20 Aligned_cols=99 Identities=9% Similarity=-0.015 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceec
Q psy3027 8 TYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVP 82 (300)
Q Consensus 8 tYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVP 82 (300)
.|+.||+..|.+++..+ .++++.++||+.|.+.. +.........+...... ....-+.+-
T Consensus 147 ~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~------~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 211 (257)
T PRK07074 147 AYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQA------WEARVAANPQVFEELKK---------WYPLQDFAT 211 (257)
T ss_pred ccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcch------hhcccccChHHHHHHHh---------cCCCCCCCC
Confidence 69999999998887753 37999999999875432 11111111111111111 011236788
Q ss_pred cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH
Q psy3027 83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL 129 (300)
Q Consensus 83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~ 129 (300)
+|.+++ ++.++.+... . .. +.++++..+ -....+|+.+.
T Consensus 212 ~~d~a~~~~~l~~~~~~--~---~~-g~~~~~~~g--~~~~~~~~~~~ 251 (257)
T PRK07074 212 PDDVANAVLFLASPAAR--A---IT-GVCLPVDGG--LTAGNREMART 251 (257)
T ss_pred HHHHHHHHHHHcCchhc--C---cC-CcEEEeCCC--cCcCChhhhhh
Confidence 888899 6666532221 1 23 457777665 33456676665
No 88
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=74.10 E-value=2.7 Score=36.85 Aligned_cols=35 Identities=17% Similarity=0.168 Sum_probs=29.0
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~ 41 (300)
+.|+-||+..|.+++... .++++.+++|+.|....
T Consensus 152 ~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~ 191 (250)
T PRK08063 152 TTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDA 191 (250)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCch
Confidence 589999999999987642 47999999999886543
No 89
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=73.41 E-value=3 Score=36.54 Aligned_cols=88 Identities=7% Similarity=0.037 Sum_probs=50.1
Q ss_pred cHHHHHHHHHHHHHHHh----cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceec
Q psy3027 7 NTYTFTKALAEDVLCKE----GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVP 82 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~----~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVP 82 (300)
+.|+-||+..|.+++.. ..++-+.+++|+.|.+...+-...+.. . ...-. .. .. ....+.+.
T Consensus 152 ~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~-~--~~~~~---~~----~~----~~~~~~~~ 217 (252)
T PRK06077 152 SIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLG-M--SEKEF---AE----KF----TLMGKILD 217 (252)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhccc-c--cHHHH---HH----hc----CcCCCCCC
Confidence 47999999999888765 236788888888776543211111000 0 00000 00 01 11125789
Q ss_pred cccccc-cccccccccCCCCCCCCCCCcEEEeeCC
Q psy3027 83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGS 116 (300)
Q Consensus 83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~ 116 (300)
++.+++ ++.++.... .. +.+|++.++
T Consensus 218 ~~dva~~~~~~~~~~~-------~~-g~~~~i~~g 244 (252)
T PRK06077 218 PEEVAEFVAAILKIES-------IT-GQVFVLDSG 244 (252)
T ss_pred HHHHHHHHHHHhCccc-------cC-CCeEEecCC
Confidence 999999 766653111 23 568998876
No 90
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=72.65 E-value=3.2 Score=36.56 Aligned_cols=36 Identities=19% Similarity=0.225 Sum_probs=29.5
Q ss_pred CcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeecc
Q psy3027 6 PNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~ 41 (300)
+..|.-||+..|.+++... .+++++++||+.|.+..
T Consensus 157 ~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~ 197 (256)
T PRK12745 157 RGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDM 197 (256)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcc
Confidence 3569999999999887663 47999999999887644
No 91
>PRK05876 short chain dehydrogenase; Provisional
Probab=72.24 E-value=3.3 Score=37.51 Aligned_cols=34 Identities=29% Similarity=0.451 Sum_probs=27.4
Q ss_pred cHHHHHHH----HHHHHHHHhc-CCCCEEEecccEEeec
Q psy3027 7 NTYTFTKA----LAEDVLCKEG-KGLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~----~aE~lv~~~~-~~lPv~IvRPsiV~~~ 40 (300)
..|.-||+ ++|.+..+.. .++.+++++|+.|.+.
T Consensus 154 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 192 (275)
T PRK05876 154 GAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETN 192 (275)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccc
Confidence 57999999 4888877763 4899999999987654
No 92
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=71.74 E-value=3.3 Score=35.92 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=29.2
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeeccC
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTYR 42 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~~ 42 (300)
..|..||+..|.++... ..+++++++||+.+.+...
T Consensus 154 ~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~ 194 (249)
T PRK12825 154 SNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMK 194 (249)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcc
Confidence 46999999999888654 2489999999999987554
No 93
>PRK06180 short chain dehydrogenase; Provisional
Probab=68.74 E-value=4.4 Score=36.44 Aligned_cols=35 Identities=14% Similarity=0.207 Sum_probs=28.4
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~ 41 (300)
..|.-||+..|.+++... .+++++++||+.|....
T Consensus 148 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~ 187 (277)
T PRK06180 148 GYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDW 187 (277)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCc
Confidence 579999999998876642 38999999999886644
No 94
>PRK08264 short chain dehydrogenase; Validated
Probab=68.46 E-value=5.1 Score=34.82 Aligned_cols=34 Identities=24% Similarity=0.203 Sum_probs=27.9
Q ss_pred CcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEee
Q psy3027 6 PNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVS 39 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~ 39 (300)
.+.|.-||+.+|.+.+..+ .+++++++||+.|.+
T Consensus 143 ~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t 181 (238)
T PRK08264 143 LGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDT 181 (238)
T ss_pred chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccc
Confidence 4679999999999887642 389999999997754
No 95
>PRK06138 short chain dehydrogenase; Provisional
Probab=67.37 E-value=4.4 Score=35.51 Aligned_cols=38 Identities=16% Similarity=0.288 Sum_probs=30.8
Q ss_pred CcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeeccCC
Q psy3027 6 PNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTYRE 43 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~~e 43 (300)
.+.|..||+..|.+++..+ .++.++++||+.|.+...+
T Consensus 150 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~ 192 (252)
T PRK06138 150 RAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFR 192 (252)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchh
Confidence 4789999999999887752 3799999999998765543
No 96
>PRK06949 short chain dehydrogenase; Provisional
Probab=67.09 E-value=5.4 Score=35.11 Aligned_cols=36 Identities=17% Similarity=0.244 Sum_probs=28.9
Q ss_pred CcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeecc
Q psy3027 6 PNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~ 41 (300)
.+.|+.||+..|.+++... .++++.++||+.|.+..
T Consensus 163 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~ 203 (258)
T PRK06949 163 IGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEI 203 (258)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCc
Confidence 4689999999998887652 37999999999886543
No 97
>PRK06123 short chain dehydrogenase; Provisional
Probab=66.93 E-value=4 Score=35.73 Aligned_cols=34 Identities=21% Similarity=0.400 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeecc
Q psy3027 8 TYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 8 tYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~ 41 (300)
.|+-||+..|.+++.. ..++++.++||+.|.+..
T Consensus 156 ~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~ 194 (248)
T PRK06123 156 DYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEI 194 (248)
T ss_pred chHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCch
Confidence 5999999999987654 237999999999987654
No 98
>KOG2762|consensus
Probab=66.36 E-value=20 Score=34.17 Aligned_cols=52 Identities=19% Similarity=0.255 Sum_probs=37.6
Q ss_pred cCCCCCHHHHHHH---HHHHHHHH------------------------HcCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q psy3027 232 DMGQMKWEYYAEA---MGLGLRVY------------------------LVHDDIHTLPAARKKYQRLYIAHCALKIFCG 283 (300)
Q Consensus 232 D~~~idW~~Y~~~---~~~Girky------------------------llke~~~~~~~a~~~~~~l~~~~~~~~~~~~ 283 (300)
...+|||..|+++ +..|.+.| -+-+..+++..|+-...-++++...+...++
T Consensus 49 ~YTEIDw~AYM~qve~fl~G~~dY~ql~GdTGPLVYPAGhv~iy~~ly~lTs~g~nv~~aQ~iF~~lYl~tLalv~~iy 127 (429)
T KOG2762|consen 49 PYTEIDWKAYMEQVEGFLNGELDYSQLVGDTGPLVYPAGHVYIYSLLYYLTSGGTNVRRAQYIFAGLYLLTLALVLRIY 127 (429)
T ss_pred CcceecHHHHHHHHHHHHhcccchhhhcCCCCCccccchHHHHHHHHHHHHcCCCeeehHHHHHHHHHHHHHHHHHHHH
Confidence 3678999999976 67788877 2334456777788777777777776665554
No 99
>PRK07775 short chain dehydrogenase; Provisional
Probab=66.21 E-value=4.9 Score=36.14 Aligned_cols=33 Identities=18% Similarity=0.317 Sum_probs=27.3
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~ 39 (300)
..|+-||+..|.+++..+ .+++++++||+.+..
T Consensus 157 ~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t 194 (274)
T PRK07775 157 GAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLT 194 (274)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccC
Confidence 369999999999998763 389999999987643
No 100
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=65.73 E-value=5.6 Score=34.67 Aligned_cols=35 Identities=11% Similarity=0.139 Sum_probs=28.6
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~ 41 (300)
..|+-||+.+|.+++... .+++++++||+.+.+..
T Consensus 154 ~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~ 193 (251)
T PRK12826 154 AHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPM 193 (251)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcch
Confidence 369999999999887752 37999999999887654
No 101
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=65.47 E-value=5.1 Score=34.88 Aligned_cols=35 Identities=17% Similarity=0.351 Sum_probs=28.7
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~ 41 (300)
..|+.||+..|.+++.. ..+++++++||+.|.++.
T Consensus 154 ~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~ 193 (247)
T PRK09730 154 VDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEM 193 (247)
T ss_pred cchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcc
Confidence 46999999999887654 248999999999997654
No 102
>PRK12827 short chain dehydrogenase; Provisional
Probab=64.97 E-value=5.7 Score=34.58 Aligned_cols=37 Identities=16% Similarity=0.222 Sum_probs=29.0
Q ss_pred CcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeeccC
Q psy3027 6 PNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTYR 42 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~~ 42 (300)
-..|+.||+..|.+++..+ .+++++++||+.|.+...
T Consensus 157 ~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~ 198 (249)
T PRK12827 157 QVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMA 198 (249)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcc
Confidence 3579999998888876542 389999999999886543
No 103
>PRK06500 short chain dehydrogenase; Provisional
Probab=64.92 E-value=4.8 Score=35.17 Aligned_cols=35 Identities=14% Similarity=0.261 Sum_probs=28.4
Q ss_pred CcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeec
Q psy3027 6 PNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~ 40 (300)
.+.|+-||+..|.+++.. ..++++.++||+.+.++
T Consensus 147 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~ 186 (249)
T PRK06500 147 SSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTP 186 (249)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCH
Confidence 468999999999999554 23899999999877653
No 104
>PRK07060 short chain dehydrogenase; Provisional
Probab=64.04 E-value=5.4 Score=34.74 Aligned_cols=36 Identities=17% Similarity=0.257 Sum_probs=29.2
Q ss_pred CcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeecc
Q psy3027 6 PNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~ 41 (300)
...|+.||+.+|.+++... .+++++.+||+.|.+..
T Consensus 147 ~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~ 187 (245)
T PRK07060 147 HLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPM 187 (245)
T ss_pred CcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCch
Confidence 3579999999999887652 37999999999887643
No 105
>PRK12744 short chain dehydrogenase; Provisional
Probab=61.77 E-value=7.7 Score=34.29 Aligned_cols=37 Identities=16% Similarity=0.354 Sum_probs=30.1
Q ss_pred CCcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeecc
Q psy3027 5 WPNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 5 ~pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~ 41 (300)
....|+-||+..|.+++..+ .++++..++|+.|....
T Consensus 155 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~ 196 (257)
T PRK12744 155 FYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPF 196 (257)
T ss_pred CcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccch
Confidence 45689999999999987762 26999999999987543
No 106
>PRK06101 short chain dehydrogenase; Provisional
Probab=61.39 E-value=9.5 Score=33.41 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=27.7
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeec
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~ 40 (300)
..|.-||+..|.+.+.. ..++.++++||+.|.+.
T Consensus 139 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~ 177 (240)
T PRK06101 139 EAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATP 177 (240)
T ss_pred chhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCC
Confidence 47999999999987653 34899999999988654
No 107
>PRK08324 short chain dehydrogenase; Validated
Probab=61.23 E-value=16 Score=37.87 Aligned_cols=32 Identities=19% Similarity=0.333 Sum_probs=27.6
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEe
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIV 38 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~ 38 (300)
..|.-||+..|++++... .++++.+++|+.|+
T Consensus 569 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~ 605 (681)
T PRK08324 569 GAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVV 605 (681)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceee
Confidence 579999999999987752 36999999999996
No 108
>PF05208 ALG3: ALG3 protein; InterPro: IPR007873 The formation of N-glycosidic linkages of glycoproteins involves the ordered assembly of the common Glc3Man9GlcNAc2 core-oligosaccharide on the lipid carrier dolichyl pyrophosphate. Whereas early mannosylation steps occur on the cytoplasmic side of the endoplasmic reticulum with GDP-Man as donor, the final reactions from Man5GlcNAc2-PP-Dol to Man9GlcNAc2-PP-Dol on the lumenal side use Dol-P-Man []. The ALG3 gene encodes the Dol-P-Man:Man5GlcNAc2-PP-Dol mannosyltransferase.; GO: 0016758 transferase activity, transferring hexosyl groups, 0005783 endoplasmic reticulum, 0016021 integral to membrane
Probab=60.60 E-value=36 Score=32.61 Aligned_cols=51 Identities=24% Similarity=0.344 Sum_probs=36.3
Q ss_pred CCCCCHHHHHHH---HHHHHHHHH-cC-----------------------CCCCChHHHHHHHHHHHHHHHHHHHHHH
Q psy3027 233 MGQMKWEYYAEA---MGLGLRVYL-VH-----------------------DDIHTLPAARKKYQRLYIAHCALKIFCG 283 (300)
Q Consensus 233 ~~~idW~~Y~~~---~~~Girkyl-lk-----------------------e~~~~~~~a~~~~~~l~~~~~~~~~~~~ 283 (300)
..+|||+.|+++ +..|-|.|- +| +..+++..|+.-..-++.+..++...++
T Consensus 22 YTEIDw~aYMqqv~~~~~Ge~DYs~i~GdTGPlVYPAGfVyiY~~Ly~lT~~G~~I~~aQ~iF~~lyl~t~~~v~~~Y 99 (368)
T PF05208_consen 22 YTEIDWKAYMQQVEGFLNGERDYSKIKGDTGPLVYPAGFVYIYSFLYYLTDGGENIRLAQYIFAGLYLATLALVFRIY 99 (368)
T ss_pred CccccHHHHHHHHHHHHcCcccHHHhcCCCCCccccchHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678999999976 777777772 22 2346778888887777777776665555
No 109
>PRK09291 short chain dehydrogenase; Provisional
Probab=60.42 E-value=9 Score=33.65 Aligned_cols=34 Identities=18% Similarity=0.265 Sum_probs=27.4
Q ss_pred CcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEee
Q psy3027 6 PNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVS 39 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~ 39 (300)
...|.-||+..|+++... ..+++++++||+.+..
T Consensus 142 ~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t 180 (257)
T PRK09291 142 TGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLT 180 (257)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccc
Confidence 468999999999887653 2489999999987643
No 110
>PRK07890 short chain dehydrogenase; Provisional
Probab=58.24 E-value=7.7 Score=34.09 Aligned_cols=35 Identities=14% Similarity=0.193 Sum_probs=29.6
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~ 41 (300)
+.|+-||+..|.+++... .++++.++||+.|.+..
T Consensus 152 ~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~ 191 (258)
T PRK07890 152 GAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDP 191 (258)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHH
Confidence 589999999999988763 37999999999987653
No 111
>PRK07454 short chain dehydrogenase; Provisional
Probab=57.93 E-value=13 Score=32.25 Aligned_cols=34 Identities=12% Similarity=0.133 Sum_probs=27.7
Q ss_pred CcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEee
Q psy3027 6 PNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVS 39 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~ 39 (300)
...|+-||+..|.+++.. ..++++.++||+.|..
T Consensus 152 ~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t 190 (241)
T PRK07454 152 WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNT 190 (241)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccC
Confidence 367999999999888653 2489999999998764
No 112
>PRK06182 short chain dehydrogenase; Validated
Probab=56.85 E-value=13 Score=33.23 Aligned_cols=34 Identities=24% Similarity=0.169 Sum_probs=27.2
Q ss_pred CcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEee
Q psy3027 6 PNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVS 39 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~ 39 (300)
...|.-||+..|.+.+.. ..++++.++||+.|..
T Consensus 143 ~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t 181 (273)
T PRK06182 143 GAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKT 181 (273)
T ss_pred ccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCccc
Confidence 457999999999986532 2489999999998854
No 113
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=56.73 E-value=14 Score=32.18 Aligned_cols=37 Identities=11% Similarity=0.178 Sum_probs=28.6
Q ss_pred CcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeeccC
Q psy3027 6 PNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTYR 42 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~~ 42 (300)
.+.|.-||+..+.+++.. ..++++.++||+.|.....
T Consensus 153 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~ 194 (239)
T PRK07666 153 TSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMA 194 (239)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcch
Confidence 367999999888777543 2489999999998876543
No 114
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=56.70 E-value=10 Score=33.41 Aligned_cols=33 Identities=12% Similarity=0.079 Sum_probs=26.5
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~ 39 (300)
..|+-||+..|.+++.. ..++.+.++||+.|..
T Consensus 152 ~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~ 189 (259)
T PRK12384 152 SGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLK 189 (259)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCccc
Confidence 58999999987776654 2589999999997654
No 115
>PRK07806 short chain dehydrogenase; Provisional
Probab=55.91 E-value=13 Score=32.43 Aligned_cols=86 Identities=17% Similarity=0.194 Sum_probs=50.4
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCccccee
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMV 81 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diV 81 (300)
..|..||+.+|.+++.. ..++.+.+++|+.+-+.....+. +.. .+ +... . .+ . ...+++
T Consensus 151 ~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~---~~~-~~-~~~~----~-~~-~-----~~~~~~ 214 (248)
T PRK07806 151 EPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLL---NRL-NP-GAIE----A-RR-E-----AAGKLY 214 (248)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhh---ccC-CH-HHHH----H-HH-h-----hhcccC
Confidence 47999999999998775 24789999998876543211100 000 00 0000 0 00 1 113678
Q ss_pred ccccccc-cccccccccCCCCCCCCCCCcEEEeeCC
Q psy3027 82 PSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGS 116 (300)
Q Consensus 82 PVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~ 116 (300)
.++.|++ ++.++... . .. +.+|++.++
T Consensus 215 ~~~dva~~~~~l~~~~----~---~~-g~~~~i~~~ 242 (248)
T PRK07806 215 TVSEFAAEVARAVTAP----V---PS-GHIEYVGGA 242 (248)
T ss_pred CHHHHHHHHHHHhhcc----c---cC-ccEEEecCc
Confidence 8999999 66665311 1 23 678988876
No 116
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=55.62 E-value=11 Score=32.62 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=26.6
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeec
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~ 40 (300)
..|.-||+..|.+++.. ..+++++++||+.|.+.
T Consensus 148 ~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~ 186 (238)
T PRK05786 148 LSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGD 186 (238)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCC
Confidence 45999999887766553 24899999999988754
No 117
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=54.88 E-value=11 Score=32.86 Aligned_cols=36 Identities=14% Similarity=0.118 Sum_probs=27.3
Q ss_pred CcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeecc
Q psy3027 6 PNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~ 41 (300)
...|+.||+..|.+++.. ..++++.++||+.+....
T Consensus 149 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~ 189 (250)
T TIGR03206 149 EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTAL 189 (250)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchh
Confidence 357999998777776654 238999999999876543
No 118
>PRK07024 short chain dehydrogenase; Provisional
Probab=54.76 E-value=12 Score=33.03 Aligned_cols=33 Identities=24% Similarity=0.319 Sum_probs=27.2
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~ 39 (300)
..|+-||+..|.+++.. ..+++++++||+.|.+
T Consensus 149 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t 186 (257)
T PRK07024 149 GAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRT 186 (257)
T ss_pred cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcC
Confidence 46999999999988553 2489999999998865
No 119
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=54.73 E-value=12 Score=34.60 Aligned_cols=34 Identities=18% Similarity=0.275 Sum_probs=24.9
Q ss_pred cHHHHHHHHHHHHH----HHhc--CCCCEEEecccEEeec
Q psy3027 7 NTYTFTKALAEDVL----CKEG--KGLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~~aE~lv----~~~~--~~lPv~IvRPsiV~~~ 40 (300)
+.|..||...|... +++. .++.+..+||+.|.++
T Consensus 191 ~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 230 (322)
T PRK07453 191 KAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT 230 (322)
T ss_pred chhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence 57999998765544 4432 3799999999999643
No 120
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=54.41 E-value=14 Score=32.47 Aligned_cols=35 Identities=11% Similarity=0.181 Sum_probs=28.9
Q ss_pred CcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeec
Q psy3027 6 PNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVST 40 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~ 40 (300)
...|.-||+..|.+++..+ .++++..++|+.|.++
T Consensus 152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 191 (260)
T PRK12823 152 RVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAP 191 (260)
T ss_pred CCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCc
Confidence 4579999999999887652 3899999999998764
No 121
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=54.27 E-value=13 Score=32.17 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=26.6
Q ss_pred CcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEee
Q psy3027 6 PNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVS 39 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~ 39 (300)
...|+.||+..|.+++.. ..+++++++||+.|.+
T Consensus 152 ~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~ 190 (248)
T PRK05557 152 QANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIET 190 (248)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCC
Confidence 357999999988777653 2489999999987754
No 122
>PRK06179 short chain dehydrogenase; Provisional
Probab=54.26 E-value=17 Score=32.23 Aligned_cols=36 Identities=17% Similarity=0.248 Sum_probs=29.0
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeeccC
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTYR 42 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~~ 42 (300)
..|..||+..|.+.+.. ..+++++++||+.|.+...
T Consensus 143 ~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~ 183 (270)
T PRK06179 143 ALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFD 183 (270)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccc
Confidence 47999999999887664 2489999999998876543
No 123
>PRK07774 short chain dehydrogenase; Provisional
Probab=53.81 E-value=14 Score=32.21 Aligned_cols=35 Identities=17% Similarity=0.258 Sum_probs=27.8
Q ss_pred CcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeec
Q psy3027 6 PNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~ 40 (300)
.+.|.-||+..|.+++.. ..++++.+++|+.|...
T Consensus 152 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~ 191 (250)
T PRK07774 152 SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTE 191 (250)
T ss_pred ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCc
Confidence 467999999998888765 24799999999877543
No 124
>PRK05993 short chain dehydrogenase; Provisional
Probab=53.74 E-value=14 Score=33.10 Aligned_cols=35 Identities=20% Similarity=0.366 Sum_probs=28.4
Q ss_pred CcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeec
Q psy3027 6 PNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~ 40 (300)
...|.-||+..|.+++.. ..++.++++||+.|-..
T Consensus 145 ~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 145 RGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 468999999999988654 24899999999987543
No 125
>PF11084 DUF2621: Protein of unknown function (DUF2621); InterPro: IPR020203 This entry represents a group of uncharacterised proteins.
Probab=53.01 E-value=44 Score=27.13 Aligned_cols=62 Identities=15% Similarity=0.188 Sum_probs=46.4
Q ss_pred HHHHHhcCCccccccccccCCCCCHHHHHHH---HHHH-HHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q psy3027 214 VQALFNKLDPEDQELFFFDMGQMKWEYYAEA---MGLG-LRVYLVHDDIHTLPAARKKYQRLYIAHCALKIF 281 (300)
Q Consensus 214 ~~~L~~~l~~~D~~~F~fD~~~idW~~Y~~~---~~~G-irkyllke~~~~~~~a~~~~~~l~~~~~~~~~~ 281 (300)
.++.+.+|+.+|. .+.+||++|.-+ +..+ =.|-+++|=.+.+|+.=+...|-.+..++-.+.
T Consensus 29 FRKFLK~lPKeDG------kS~LDWq~~yi~~trhlW~de~K~lL~eLV~PVPelFRdvAk~kIAgkIgelA 94 (141)
T PF11084_consen 29 FRKFLKRLPKEDG------KSILDWQEYYIEKTRHLWTDEQKALLEELVSPVPELFRDVAKHKIAGKIGELA 94 (141)
T ss_pred HHHHHHhCCcccC------cccccHHHHHHHHhHhhcCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHH
Confidence 3567889999997 678999998744 3332 245577887888999888888888887776654
No 126
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=52.99 E-value=10 Score=32.78 Aligned_cols=35 Identities=17% Similarity=0.250 Sum_probs=27.5
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~ 41 (300)
..|..+|+..|.+++.. ..++.++++||+.+.+..
T Consensus 152 ~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~ 191 (246)
T PRK05653 152 TNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDM 191 (246)
T ss_pred cHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcc
Confidence 46999999887777664 248999999999887644
No 127
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=52.31 E-value=9.5 Score=33.34 Aligned_cols=33 Identities=18% Similarity=0.336 Sum_probs=26.6
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~ 39 (300)
..|+-||+..|.+++..+ .++++.++||+.|-.
T Consensus 155 ~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t 192 (248)
T PRK06947 155 VDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIET 192 (248)
T ss_pred cccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccc
Confidence 369999999998876542 379999999998754
No 128
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=51.99 E-value=14 Score=32.06 Aligned_cols=37 Identities=22% Similarity=0.311 Sum_probs=29.4
Q ss_pred CcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeeccC
Q psy3027 6 PNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTYR 42 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~~ 42 (300)
...|.-||+..|.+++... .+++++.++|+.|.+...
T Consensus 160 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~ 201 (253)
T PRK08217 160 QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMT 201 (253)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccc
Confidence 4679999999999877652 489999999998875443
No 129
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=51.14 E-value=11 Score=32.89 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=25.4
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~ 39 (300)
..|+-||+..|.+.+.. ..++++++++|+.|.+
T Consensus 154 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t 191 (247)
T PRK12935 154 TNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDT 191 (247)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcC
Confidence 57999999776665443 2489999999998754
No 130
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=50.87 E-value=13 Score=32.41 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=29.0
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~ 41 (300)
..|+-||+..|.+++... .++.+.++||+.|.+..
T Consensus 146 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~ 185 (252)
T PRK08220 146 AAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDM 185 (252)
T ss_pred chhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchh
Confidence 579999999999986653 47999999999887654
No 131
>PRK12742 oxidoreductase; Provisional
Probab=50.37 E-value=14 Score=31.95 Aligned_cols=35 Identities=17% Similarity=0.308 Sum_probs=28.1
Q ss_pred CcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeec
Q psy3027 6 PNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~ 40 (300)
-+.|+-||+..|++++.. ..++.+.+++|+.|...
T Consensus 143 ~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~ 182 (237)
T PRK12742 143 MAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTD 182 (237)
T ss_pred CcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCC
Confidence 357999999999998764 24799999999987543
No 132
>PRK08017 oxidoreductase; Provisional
Probab=50.16 E-value=19 Score=31.55 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=26.0
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~ 39 (300)
+.|+-||+..|.+.+.. ..++.++++||+.+..
T Consensus 144 ~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t 181 (256)
T PRK08017 144 GAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRT 181 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCccc
Confidence 56999999999987532 3589999999986643
No 133
>PRK06057 short chain dehydrogenase; Provisional
Probab=49.96 E-value=16 Score=32.26 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=24.6
Q ss_pred cHHHHHHH----HHHHHHHHh-cCCCCEEEecccEEeec
Q psy3027 7 NTYTFTKA----LAEDVLCKE-GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~----~aE~lv~~~-~~~lPv~IvRPsiV~~~ 40 (300)
..|+.||+ ++|.+..+. ..++.++++||+.|.++
T Consensus 152 ~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~ 190 (255)
T PRK06057 152 ISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTP 190 (255)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCc
Confidence 46999996 444444444 34899999999988653
No 134
>PRK06523 short chain dehydrogenase; Provisional
Probab=49.81 E-value=16 Score=32.10 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=28.5
Q ss_pred CcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeec
Q psy3027 6 PNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVST 40 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~ 40 (300)
...|+-||+..|.+++..+ .++.+.+++|+.|...
T Consensus 149 ~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~ 188 (260)
T PRK06523 149 TTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETE 188 (260)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCc
Confidence 4679999999998877652 4799999999988654
No 135
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=49.53 E-value=23 Score=31.06 Aligned_cols=34 Identities=21% Similarity=0.296 Sum_probs=28.0
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeec
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~ 40 (300)
+.|+-||+..|++.+... .++.+.+++|+.|.++
T Consensus 145 ~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~ 183 (248)
T PRK10538 145 NVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGT 183 (248)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeeccc
Confidence 489999999999886652 3789999999999654
No 136
>PRK06196 oxidoreductase; Provisional
Probab=49.09 E-value=19 Score=33.07 Aligned_cols=35 Identities=14% Similarity=0.168 Sum_probs=28.0
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~ 41 (300)
+.|.-||+..|.+.+.. ..++.++++||+.|.+..
T Consensus 179 ~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~ 218 (315)
T PRK06196 179 LAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPL 218 (315)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCc
Confidence 47999999998887544 247999999999987654
No 137
>PRK05717 oxidoreductase; Validated
Probab=48.75 E-value=19 Score=31.72 Aligned_cols=35 Identities=14% Similarity=0.173 Sum_probs=28.0
Q ss_pred CcHHHHHHHHHHHHHHHh----cCCCCEEEecccEEeec
Q psy3027 6 PNTYTFTKALAEDVLCKE----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~----~~~lPv~IvRPsiV~~~ 40 (300)
.+.|+-||+..|.+++.. ..++.+..++|+.|.+.
T Consensus 154 ~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~ 192 (255)
T PRK05717 154 TEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDAR 192 (255)
T ss_pred CcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCC
Confidence 468999999999888754 34689999999988664
No 138
>PRK08628 short chain dehydrogenase; Provisional
Probab=48.46 E-value=14 Score=32.52 Aligned_cols=36 Identities=14% Similarity=0.232 Sum_probs=29.5
Q ss_pred CcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeecc
Q psy3027 6 PNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~ 41 (300)
-..|.-||+..|.+++..+ .++.+..|||+.|.+..
T Consensus 150 ~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~ 190 (258)
T PRK08628 150 TSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPL 190 (258)
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHH
Confidence 3579999999999998652 37999999999887643
No 139
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=48.36 E-value=16 Score=31.48 Aligned_cols=34 Identities=15% Similarity=0.194 Sum_probs=26.0
Q ss_pred CcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEee
Q psy3027 6 PNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVS 39 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~ 39 (300)
...|..||+..|.+++.. ..++++.++||+.+.+
T Consensus 145 ~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~ 183 (239)
T TIGR01830 145 QANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDT 183 (239)
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCC
Confidence 357999999777766553 2589999999987644
No 140
>PRK07326 short chain dehydrogenase; Provisional
Probab=48.11 E-value=24 Score=30.49 Aligned_cols=33 Identities=12% Similarity=0.178 Sum_probs=25.7
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~ 39 (300)
..|.-||+..+.+++.. ..+++++++||+.|..
T Consensus 151 ~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t 188 (237)
T PRK07326 151 AAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVAT 188 (237)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccC
Confidence 36999999777776653 2489999999997754
No 141
>PRK07577 short chain dehydrogenase; Provisional
Probab=47.83 E-value=18 Score=31.24 Aligned_cols=35 Identities=14% Similarity=0.147 Sum_probs=28.3
Q ss_pred CCcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEee
Q psy3027 5 WPNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVS 39 (300)
Q Consensus 5 ~pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~ 39 (300)
....|..||+..|.+++.. ..++.++++||+.|..
T Consensus 135 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t 174 (234)
T PRK07577 135 DRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIET 174 (234)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccC
Confidence 3567999999999888654 2489999999998764
No 142
>PRK08703 short chain dehydrogenase; Provisional
Probab=46.80 E-value=17 Score=31.63 Aligned_cols=35 Identities=23% Similarity=0.146 Sum_probs=27.8
Q ss_pred cHHHHHHHHHHHHHHHhc------CCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKEG------KGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~------~~lPv~IvRPsiV~~~~ 41 (300)
..|+-||+..|.+++..+ +++.+.+++|+.|.++.
T Consensus 158 ~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~ 198 (239)
T PRK08703 158 GGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQ 198 (239)
T ss_pred cchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcc
Confidence 369999999999976541 26899999999987654
No 143
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=44.95 E-value=22 Score=31.35 Aligned_cols=33 Identities=12% Similarity=0.236 Sum_probs=27.1
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~ 39 (300)
..|..||+..|.+++... .++++.+++|+.+..
T Consensus 164 ~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t 201 (259)
T PRK08213 164 IAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPT 201 (259)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCC
Confidence 579999999999987652 379999999987754
No 144
>PRK06953 short chain dehydrogenase; Provisional
Probab=44.56 E-value=34 Score=29.35 Aligned_cols=33 Identities=21% Similarity=0.273 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHhc---CCCCEEEecccEEeec
Q psy3027 8 TYTFTKALAEDVLCKEG---KGLPLAVLRPAVIVST 40 (300)
Q Consensus 8 tYt~TK~~aE~lv~~~~---~~lPv~IvRPsiV~~~ 40 (300)
.|..||+..|.+++... .++++..++|+.|..+
T Consensus 145 ~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~ 180 (222)
T PRK06953 145 LYRASKAALNDALRAASLQARHATCIALHPGWVRTD 180 (222)
T ss_pred ccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecC
Confidence 49999999999988763 4678999999887653
No 145
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=44.05 E-value=19 Score=31.59 Aligned_cols=35 Identities=20% Similarity=0.249 Sum_probs=28.8
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~ 41 (300)
..|..||+..|.+++.. ..++++.++||+.+.+..
T Consensus 157 ~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~ 196 (255)
T PRK07523 157 APYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPL 196 (255)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCch
Confidence 47999999999998765 248999999999877654
No 146
>PRK09134 short chain dehydrogenase; Provisional
Probab=43.52 E-value=27 Score=30.72 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=26.2
Q ss_pred cHHHHHHHHHHHHHHHhc----CCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKEG----KGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~----~~lPv~IvRPsiV~~ 39 (300)
..|..||+..|.+.+..+ .++.+..++|+.|..
T Consensus 157 ~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t 193 (258)
T PRK09134 157 LSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLP 193 (258)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccC
Confidence 379999999988887752 358999999987754
No 147
>PRK12937 short chain dehydrogenase; Provisional
Probab=43.48 E-value=22 Score=30.82 Aligned_cols=34 Identities=21% Similarity=0.429 Sum_probs=27.3
Q ss_pred CcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEee
Q psy3027 6 PNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVS 39 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~ 39 (300)
.+.|.-||+..|.+++.. ..++.+.+++|+.|-.
T Consensus 150 ~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t 188 (245)
T PRK12937 150 YGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVAT 188 (245)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccC
Confidence 357999999999998764 2378999999987654
No 148
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=43.05 E-value=22 Score=31.01 Aligned_cols=35 Identities=17% Similarity=0.255 Sum_probs=27.3
Q ss_pred CcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeec
Q psy3027 6 PNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~ 40 (300)
-+.|+-||+.+|++++.. ..++++.+++|+.|.++
T Consensus 162 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~ 201 (247)
T PRK08945 162 WGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTA 201 (247)
T ss_pred CcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCc
Confidence 347999999999988764 23788889999877544
No 149
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=42.43 E-value=35 Score=34.78 Aligned_cols=30 Identities=30% Similarity=0.420 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCEEEecccEEee
Q psy3027 8 TYTFTKALAEDVLCKEGKGLPLAVLRPAVIVS 39 (300)
Q Consensus 8 tYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~ 39 (300)
.|...|..+|+.+.+ .+++++||||+.+.+
T Consensus 226 ~~~~~KraaE~~L~~--sGIrvTIVRPG~L~t 255 (576)
T PLN03209 226 GVLCWKRKAEEALIA--SGLPYTIVRPGGMER 255 (576)
T ss_pred HHHHHHHHHHHHHHH--cCCCEEEEECCeecC
Confidence 466788888888865 589999999998864
No 150
>PLN02253 xanthoxin dehydrogenase
Probab=42.40 E-value=21 Score=31.85 Aligned_cols=37 Identities=16% Similarity=0.260 Sum_probs=29.8
Q ss_pred CCcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeecc
Q psy3027 5 WPNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 5 ~pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~ 41 (300)
.++.|+-||+..|.+.+..+ .++.+..++|+.|..+.
T Consensus 164 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~ 205 (280)
T PLN02253 164 GPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTAL 205 (280)
T ss_pred CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence 35689999999999997652 37999999999886543
No 151
>PRK12939 short chain dehydrogenase; Provisional
Probab=42.08 E-value=23 Score=30.76 Aligned_cols=34 Identities=12% Similarity=0.303 Sum_probs=27.1
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeec
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~ 40 (300)
..|+-||+..|.+++... .++++.+++|+.|...
T Consensus 154 ~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~ 192 (250)
T PRK12939 154 GAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATE 192 (250)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCc
Confidence 369999999999987642 4799999999976543
No 152
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=41.40 E-value=31 Score=30.37 Aligned_cols=35 Identities=14% Similarity=0.154 Sum_probs=28.6
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~ 41 (300)
..|+-||+..|.+++..+ .++.+..++|+.|-...
T Consensus 161 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~ 200 (258)
T PRK06935 161 PAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTAN 200 (258)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccc
Confidence 489999999999887752 37999999999876543
No 153
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=40.77 E-value=23 Score=30.68 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeecc
Q psy3027 8 TYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 8 tYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~ 41 (300)
.|+-||+..|.+++.. ..++++.+++|+.+.+..
T Consensus 151 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 189 (245)
T PRK12824 151 NYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPM 189 (245)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcc
Confidence 6999999777776554 237999999999876543
No 154
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=40.69 E-value=26 Score=30.85 Aligned_cols=33 Identities=21% Similarity=0.248 Sum_probs=26.6
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~ 39 (300)
..|+.||+..|.+++.. ..+++++.++|+.+..
T Consensus 165 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t 202 (256)
T PRK12748 165 LAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDT 202 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccC
Confidence 47999999999997764 2479999999986543
No 155
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=39.92 E-value=28 Score=30.38 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=26.9
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~ 39 (300)
+.|+.||+..|.+++.. ..++.+.+++|+.|..
T Consensus 148 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t 185 (254)
T TIGR02415 148 SAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKT 185 (254)
T ss_pred cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccC
Confidence 57999999999998753 2379999999998754
No 156
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=39.74 E-value=30 Score=30.13 Aligned_cols=33 Identities=15% Similarity=0.227 Sum_probs=27.2
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~ 39 (300)
+.|+-||+..|++++..+ .++-+..|+|+.|..
T Consensus 157 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t 194 (253)
T PRK08642 157 HDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRT 194 (253)
T ss_pred cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCC
Confidence 689999999999998862 368888889987754
No 157
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=39.54 E-value=21 Score=30.88 Aligned_cols=35 Identities=14% Similarity=0.149 Sum_probs=26.0
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~ 41 (300)
..|+-||+..|.+.+.. ..++++..++|+.|....
T Consensus 147 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 186 (239)
T TIGR01831 147 VNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEM 186 (239)
T ss_pred cchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCcccc
Confidence 37999999776655443 248999999999886543
No 158
>PRK08251 short chain dehydrogenase; Provisional
Probab=39.53 E-value=31 Score=29.99 Aligned_cols=33 Identities=18% Similarity=0.176 Sum_probs=26.0
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~ 39 (300)
+.|.-||+..|.+++... .++.+++++|+.|.+
T Consensus 152 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t 189 (248)
T PRK08251 152 AAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRS 189 (248)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcc
Confidence 469999999888776542 378999999987754
No 159
>PRK07035 short chain dehydrogenase; Provisional
Probab=39.44 E-value=27 Score=30.56 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=28.1
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeec
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~ 40 (300)
..|.-||+..|.+++... .++++..+.|+.|...
T Consensus 156 ~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~ 194 (252)
T PRK07035 156 GIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTK 194 (252)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCc
Confidence 479999999999988762 3799999999987543
No 160
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=39.01 E-value=20 Score=31.92 Aligned_cols=32 Identities=16% Similarity=0.242 Sum_probs=27.0
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEe
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIV 38 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~ 38 (300)
+.|.-||+..|.+++..+ .++.+..|+|+.|.
T Consensus 171 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~ 207 (267)
T TIGR02685 171 TMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSL 207 (267)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCcc
Confidence 489999999999987752 37999999999874
No 161
>PRK06181 short chain dehydrogenase; Provisional
Probab=38.97 E-value=33 Score=30.20 Aligned_cols=35 Identities=14% Similarity=0.297 Sum_probs=27.8
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~ 41 (300)
..|..||+..|.+.+.. ..++.+.++||+.|....
T Consensus 148 ~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~ 187 (263)
T PRK06181 148 SGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDI 187 (263)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCc
Confidence 57999999999888654 248999999998776543
No 162
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=38.70 E-value=32 Score=30.19 Aligned_cols=34 Identities=12% Similarity=0.295 Sum_probs=26.9
Q ss_pred cHHHHHHHHHHHHHHHhc------CCCCEEEecccEEeec
Q psy3027 7 NTYTFTKALAEDVLCKEG------KGLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~------~~lPv~IvRPsiV~~~ 40 (300)
..|+-||+..|.+.+... .++.+..|+|+.|.+.
T Consensus 135 ~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~ 174 (241)
T PRK12428 135 TGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTP 174 (241)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCc
Confidence 689999999988775432 3799999999987654
No 163
>PRK12828 short chain dehydrogenase; Provisional
Probab=38.23 E-value=27 Score=29.95 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=26.6
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeec
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~ 40 (300)
..|+-+|+..|.++... ..++++.++||+.|.+.
T Consensus 152 ~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~ 190 (239)
T PRK12828 152 GAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTP 190 (239)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCc
Confidence 36999999887777554 24899999999988764
No 164
>PRK08267 short chain dehydrogenase; Provisional
Probab=38.16 E-value=35 Score=30.00 Aligned_cols=34 Identities=18% Similarity=0.218 Sum_probs=26.9
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeec
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~ 40 (300)
+.|+-||+..|.+.+.. ..++++.++||+.|...
T Consensus 147 ~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~ 185 (260)
T PRK08267 147 AVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTA 185 (260)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCc
Confidence 57999999988877664 24799999999987643
No 165
>PRK12747 short chain dehydrogenase; Provisional
Probab=38.07 E-value=33 Score=30.02 Aligned_cols=34 Identities=18% Similarity=0.369 Sum_probs=27.9
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeec
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~ 40 (300)
..|+-||+..|.+++.. ..++.+..|.|+.|...
T Consensus 156 ~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~ 194 (252)
T PRK12747 156 IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTD 194 (252)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCc
Confidence 47999999999888764 24799999999988654
No 166
>PRK07023 short chain dehydrogenase; Provisional
Probab=37.66 E-value=36 Score=29.62 Aligned_cols=33 Identities=24% Similarity=0.328 Sum_probs=26.9
Q ss_pred cHHHHHHHHHHHHHHHhc----CCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKEG----KGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~----~~lPv~IvRPsiV~~ 39 (300)
.+|.-||+..|.+++... .++.+..++|+.|-.
T Consensus 148 ~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t 184 (243)
T PRK07023 148 SVYCATKAALDHHARAVALDANRALRIVSLAPGVVDT 184 (243)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCcccc
Confidence 469999999999998552 379999999987744
No 167
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=37.52 E-value=28 Score=29.96 Aligned_cols=36 Identities=14% Similarity=0.196 Sum_probs=27.5
Q ss_pred CcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeecc
Q psy3027 6 PNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~ 41 (300)
...|+-||+..|.+.+.. ..++++.+++|+.|.++.
T Consensus 137 ~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~ 177 (235)
T PRK06550 137 GAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPM 177 (235)
T ss_pred CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcc
Confidence 357999999877776553 248999999999886543
No 168
>PRK09186 flagellin modification protein A; Provisional
Probab=37.07 E-value=36 Score=29.68 Aligned_cols=32 Identities=16% Similarity=0.109 Sum_probs=25.1
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEe
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIV 38 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~ 38 (300)
..|.-||+..|.+.+.. ..++.+.+++|+.+.
T Consensus 166 ~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~ 202 (256)
T PRK09186 166 VEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGIL 202 (256)
T ss_pred chhHHHHHHHHHHHHHHHHHhCcCCeEEEEEeccccc
Confidence 46999999999887532 247999999998664
No 169
>PRK05867 short chain dehydrogenase; Provisional
Probab=36.84 E-value=31 Score=30.29 Aligned_cols=35 Identities=14% Similarity=0.199 Sum_probs=28.4
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~ 41 (300)
..|+-||+..|.+++.. ..++.+..|+|+.|-...
T Consensus 159 ~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~ 198 (253)
T PRK05867 159 SHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTEL 198 (253)
T ss_pred cchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcc
Confidence 47999999999988775 247999999999886543
No 170
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=36.71 E-value=36 Score=29.32 Aligned_cols=34 Identities=15% Similarity=0.213 Sum_probs=24.7
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeec
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~ 40 (300)
..|+.||+..|.+++.. ..+++++++||+.|...
T Consensus 153 ~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~ 191 (247)
T PRK05565 153 VLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTE 191 (247)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCc
Confidence 36889987666655443 34899999999987543
No 171
>PRK06128 oxidoreductase; Provisional
Probab=36.40 E-value=28 Score=31.74 Aligned_cols=35 Identities=20% Similarity=0.218 Sum_probs=28.2
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~ 41 (300)
..|+-||+..|.+++... .++.+.+++|+.|.+..
T Consensus 203 ~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~ 242 (300)
T PRK06128 203 LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPL 242 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCC
Confidence 359999999999887652 48999999999887643
No 172
>PRK08643 acetoin reductase; Validated
Probab=36.22 E-value=34 Score=29.92 Aligned_cols=33 Identities=15% Similarity=0.339 Sum_probs=25.9
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~ 39 (300)
+.|+.||+..|.+++.. ..++.+..++|+.|..
T Consensus 150 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t 187 (256)
T PRK08643 150 AVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKT 187 (256)
T ss_pred chhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcC
Confidence 46999999887776654 2479999999998764
No 173
>KOG1203|consensus
Probab=36.17 E-value=39 Score=32.96 Aligned_cols=31 Identities=35% Similarity=0.500 Sum_probs=25.0
Q ss_pred CCCcHHH------HHHHHHHHHHHHhcCCCCEEEecccE
Q psy3027 4 EWPNTYT------FTKALAEDVLCKEGKGLPLAVLRPAV 36 (300)
Q Consensus 4 ~~pNtYt------~TK~~aE~lv~~~~~~lPv~IvRPsi 36 (300)
.+||.+. -.|.++|+.+++ .++|.+||||+-
T Consensus 209 ~~~~~~~~~~~~~~~k~~~e~~~~~--Sgl~ytiIR~g~ 245 (411)
T KOG1203|consen 209 QPPNILLLNGLVLKAKLKAEKFLQD--SGLPYTIIRPGG 245 (411)
T ss_pred CCchhhhhhhhhhHHHHhHHHHHHh--cCCCcEEEeccc
Confidence 4566666 788899998875 689999999983
No 174
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=35.53 E-value=35 Score=29.75 Aligned_cols=35 Identities=11% Similarity=0.128 Sum_probs=26.9
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~ 41 (300)
+.|..+|+..|.+.+.. ..++.+.++||+.|.+..
T Consensus 151 ~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~ 190 (258)
T PRK12429 151 AAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPL 190 (258)
T ss_pred chhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchh
Confidence 57889998888777643 247999999999887643
No 175
>PRK05650 short chain dehydrogenase; Provisional
Probab=35.34 E-value=49 Score=29.32 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=26.2
Q ss_pred cHHHHHHHH----HHHHHHHhc-CCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKAL----AEDVLCKEG-KGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~----aE~lv~~~~-~~lPv~IvRPsiV~~~~ 41 (300)
..|+-||+. +|.+..+.. .++.+.+++|+.|-...
T Consensus 147 ~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 186 (270)
T PRK05650 147 SSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNL 186 (270)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCc
Confidence 479999996 555555543 48999999999887543
No 176
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=34.77 E-value=38 Score=29.64 Aligned_cols=37 Identities=8% Similarity=0.100 Sum_probs=29.8
Q ss_pred CcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeeccC
Q psy3027 6 PNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTYR 42 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~~ 42 (300)
...|.-||+..|.+++..+ .++.+..++|+.+..+..
T Consensus 155 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~ 196 (254)
T PRK08085 155 ITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMT 196 (254)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcch
Confidence 3579999999999998762 379999999998766543
No 177
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=34.47 E-value=40 Score=29.28 Aligned_cols=35 Identities=20% Similarity=0.264 Sum_probs=26.2
Q ss_pred CcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeec
Q psy3027 6 PNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~ 40 (300)
...|+-||+..|.+++.. ..++++..++|+.+...
T Consensus 150 ~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~ 189 (246)
T PRK12938 150 QTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTD 189 (246)
T ss_pred ChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCc
Confidence 356999999777665543 24899999999987643
No 178
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=34.46 E-value=47 Score=28.85 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=28.5
Q ss_pred CCcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeec
Q psy3027 5 WPNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVST 40 (300)
Q Consensus 5 ~pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~ 40 (300)
....|+-||+..|.+++..+ .++.+..++|+.|...
T Consensus 149 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~ 189 (248)
T TIGR01832 149 RVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATN 189 (248)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCc
Confidence 34579999999988876652 3799999999988654
No 179
>PRK07832 short chain dehydrogenase; Provisional
Probab=33.53 E-value=51 Score=29.33 Aligned_cols=36 Identities=14% Similarity=0.211 Sum_probs=25.5
Q ss_pred CcHHHHHHHHHHHHHH----Hh-cCCCCEEEecccEEeecc
Q psy3027 6 PNTYTFTKALAEDVLC----KE-GKGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~----~~-~~~lPv~IvRPsiV~~~~ 41 (300)
-..|+.||+..+.+.+ +. ..++++++++|+.|.++.
T Consensus 148 ~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~ 188 (272)
T PRK07832 148 HAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL 188 (272)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence 3469999985555443 32 348999999999887543
No 180
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=32.82 E-value=36 Score=30.00 Aligned_cols=34 Identities=21% Similarity=0.292 Sum_probs=24.2
Q ss_pred cHHHHHHHH----HHHHHHHh-cCCCCEEEecccEEeec
Q psy3027 7 NTYTFTKAL----AEDVLCKE-GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~~----aE~lv~~~-~~~lPv~IvRPsiV~~~ 40 (300)
..|+-||+. +|.+..+. ..++.+..++|+.|-..
T Consensus 156 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~ 194 (261)
T PRK08936 156 VHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTP 194 (261)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCC
Confidence 479999954 44444444 34899999999977654
No 181
>PRK08177 short chain dehydrogenase; Provisional
Probab=32.51 E-value=73 Score=27.31 Aligned_cols=34 Identities=15% Similarity=0.149 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeecc
Q psy3027 8 TYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 8 tYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~ 41 (300)
.|+-||+..|.+++..+ .++.+..++|+.|-...
T Consensus 146 ~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~ 184 (225)
T PRK08177 146 LYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM 184 (225)
T ss_pred chHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence 69999999999998652 36889999999886544
No 182
>PRK07825 short chain dehydrogenase; Provisional
Probab=31.90 E-value=51 Score=29.22 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=23.5
Q ss_pred cHHHHHHHHHHHHHHH----h-cCCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCK----E-GKGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~----~-~~~lPv~IvRPsiV~~ 39 (300)
..|.-||+..+.+.+. . ..++++++++|+.|..
T Consensus 148 ~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t 185 (273)
T PRK07825 148 ATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNT 185 (273)
T ss_pred cchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcc
Confidence 3699999766554433 2 3489999999997743
No 183
>COG3945 Uncharacterized conserved protein [Function unknown]
Probab=31.90 E-value=38 Score=29.15 Aligned_cols=35 Identities=17% Similarity=0.024 Sum_probs=30.5
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHH
Q psy3027 237 KWEYYAEAMGLGLRVYLVHDDIHTLPAARKKYQRL 271 (300)
Q Consensus 237 dW~~Y~~~~~~Girkyllke~~~~~~~a~~~~~~l 271 (300)
+-.+|...|..++++||.||+.+-.|-|++.+-.=
T Consensus 117 ~~i~~A~~y~~likrHIdkEdnvlfp~a~~~~s~e 151 (189)
T COG3945 117 DVIDYAVAYLNLIKRHIDKEDNVLFPFAESTLSEE 151 (189)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 45689999999999999999999999998876544
No 184
>PRK06701 short chain dehydrogenase; Provisional
Probab=31.52 E-value=33 Score=31.19 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=27.7
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeec
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~ 40 (300)
..|+-||+..|.+++..+ .++++..+||+.|..+
T Consensus 193 ~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~ 231 (290)
T PRK06701 193 IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTP 231 (290)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCc
Confidence 579999999998887763 3799999999987654
No 185
>PRK07102 short chain dehydrogenase; Provisional
Probab=31.41 E-value=82 Score=27.27 Aligned_cols=33 Identities=18% Similarity=0.304 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeec
Q psy3027 8 TYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 8 tYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~ 40 (300)
.|.-||+..+++.+.. ..++++.+++|+.|...
T Consensus 147 ~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~ 184 (243)
T PRK07102 147 VYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTP 184 (243)
T ss_pred ccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCh
Confidence 5999999888887664 34899999999987653
No 186
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=31.21 E-value=49 Score=28.45 Aligned_cols=36 Identities=19% Similarity=0.244 Sum_probs=26.3
Q ss_pred CcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeecc
Q psy3027 6 PNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~ 41 (300)
...|..||+..|.+++.. ..++++..++|+.+.+..
T Consensus 147 ~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~ 187 (242)
T TIGR01829 147 QTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDM 187 (242)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcc
Confidence 346999999666655443 248999999999887543
No 187
>PRK06172 short chain dehydrogenase; Provisional
Probab=30.94 E-value=44 Score=29.15 Aligned_cols=36 Identities=22% Similarity=0.283 Sum_probs=27.5
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeeccC
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTYR 42 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~~ 42 (300)
..|+.||+..|.+.+... .++.+..+.|+.|-....
T Consensus 155 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~ 195 (253)
T PRK06172 155 SIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMF 195 (253)
T ss_pred chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhh
Confidence 579999998888776542 479999999998765443
No 188
>PRK05866 short chain dehydrogenase; Provisional
Probab=30.92 E-value=58 Score=29.62 Aligned_cols=34 Identities=18% Similarity=0.206 Sum_probs=27.1
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeec
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~ 40 (300)
+.|+.||+..|.+++.. ..++.+..++|+.|-.+
T Consensus 190 ~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~ 228 (293)
T PRK05866 190 SVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATP 228 (293)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCc
Confidence 57999999988887664 23899999999977654
No 189
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=30.19 E-value=46 Score=29.27 Aligned_cols=34 Identities=15% Similarity=0.210 Sum_probs=27.0
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeec
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~ 40 (300)
..|+-||+..|.+.+.. ..++.+..++|+.|-..
T Consensus 156 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~ 194 (253)
T PRK08993 156 PSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATN 194 (253)
T ss_pred cchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCc
Confidence 48999999988887654 23789999999988643
No 190
>PRK05693 short chain dehydrogenase; Provisional
Probab=30.11 E-value=64 Score=28.66 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=27.6
Q ss_pred CCcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeec
Q psy3027 5 WPNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 5 ~pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~ 40 (300)
....|.-||+..|.+.+.. ..++.++++||+.|...
T Consensus 139 ~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~ 179 (274)
T PRK05693 139 FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQ 179 (274)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence 3468999999888876543 24899999999988543
No 191
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=29.88 E-value=54 Score=28.92 Aligned_cols=32 Identities=16% Similarity=0.224 Sum_probs=26.9
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEe
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIV 38 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~ 38 (300)
..|+-||+..|.+++..+ .++.+.+|+|+.|.
T Consensus 156 ~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 156 SCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 579999999999887652 47999999999884
No 192
>PRK06114 short chain dehydrogenase; Provisional
Probab=29.83 E-value=52 Score=28.87 Aligned_cols=34 Identities=18% Similarity=0.287 Sum_probs=27.0
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeec
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~ 40 (300)
..|+-||+..|.+++.. ..++++.+++|+.|...
T Consensus 158 ~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~ 196 (254)
T PRK06114 158 AHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATP 196 (254)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCc
Confidence 57999999877776654 24899999999987654
No 193
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=29.73 E-value=42 Score=29.05 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=26.4
Q ss_pred cHHHHHHHHHHHHHHHh----cC-CCCEEEecccEEeec
Q psy3027 7 NTYTFTKALAEDVLCKE----GK-GLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~----~~-~lPv~IvRPsiV~~~ 40 (300)
+.|.-||+..|.+.+.. .. ++.+..+||+.|...
T Consensus 152 ~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~ 190 (251)
T PRK07231 152 GWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETG 190 (251)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCC
Confidence 46999998888777654 22 899999999988553
No 194
>PRK07831 short chain dehydrogenase; Provisional
Probab=29.03 E-value=46 Score=29.31 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=27.5
Q ss_pred CcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEee
Q psy3027 6 PNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVS 39 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~ 39 (300)
...|+-||+.-|.+++..+ .++.+..++|+.+..
T Consensus 167 ~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t 205 (262)
T PRK07831 167 QAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMH 205 (262)
T ss_pred CcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccC
Confidence 3479999999999887652 479999999998754
No 195
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=28.86 E-value=1.5e+02 Score=28.79 Aligned_cols=48 Identities=21% Similarity=0.113 Sum_probs=32.9
Q ss_pred HHhcCCccccccccccCCCCCHHHHHHHHHHHHHHHH--cCCCCCChHHHHHHHHHHH
Q psy3027 217 LFNKLDPEDQELFFFDMGQMKWEYYAEAMGLGLRVYL--VHDDIHTLPAARKKYQRLY 272 (300)
Q Consensus 217 L~~~l~~~D~~~F~fD~~~idW~~Y~~~~~~Girkyl--lke~~~~~~~a~~~~~~l~ 272 (300)
+...||.+||+. .|+++++.|..-..+.+ -++.+=|+++-+.-++..+
T Consensus 314 l~~~lS~edRR~--------~~~~lL~~Yy~~f~~~l~~~~~~PfT~eqL~~sY~l~f 363 (414)
T PF07914_consen 314 LVSCLSGEDRRE--------HTEELLEYYYDTFTEALEDGGKAPFTLEQLKDSYRLYF 363 (414)
T ss_pred HHhcCCHHHHHH--------HHHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHH
Confidence 445678888877 89999999999999998 1123345555555555433
No 196
>PRK07985 oxidoreductase; Provisional
Probab=28.56 E-value=54 Score=29.81 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=27.7
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~ 41 (300)
..|+-||+..|.+++.. ..++++..++|+.|.+..
T Consensus 197 ~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~ 236 (294)
T PRK07985 197 LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236 (294)
T ss_pred chhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccc
Confidence 47999999888777654 248999999999887643
No 197
>PRK07904 short chain dehydrogenase; Provisional
Probab=27.81 E-value=67 Score=28.37 Aligned_cols=32 Identities=25% Similarity=0.295 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHh-----cCCCCEEEecccEEee
Q psy3027 8 TYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVS 39 (300)
Q Consensus 8 tYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~ 39 (300)
.|+-||+..+.+.+.. ..++.+.++||+.|..
T Consensus 158 ~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t 194 (253)
T PRK07904 158 VYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRT 194 (253)
T ss_pred chHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceec
Confidence 5999999877554432 3489999999998865
No 198
>PRK12743 oxidoreductase; Provisional
Probab=27.48 E-value=52 Score=28.93 Aligned_cols=34 Identities=18% Similarity=0.292 Sum_probs=27.2
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeec
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~ 40 (300)
..|+-||+..|.+++..+ .++.+..|+|+.|...
T Consensus 151 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~ 189 (256)
T PRK12743 151 SAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATP 189 (256)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCc
Confidence 479999999998886642 3799999999977653
No 199
>PRK06483 dihydromonapterin reductase; Provisional
Probab=26.87 E-value=82 Score=27.14 Aligned_cols=32 Identities=19% Similarity=0.305 Sum_probs=26.5
Q ss_pred cHHHHHHHHHHHHHHHh----cCCCCEEEecccEEe
Q psy3027 7 NTYTFTKALAEDVLCKE----GKGLPLAVLRPAVIV 38 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~----~~~lPv~IvRPsiV~ 38 (300)
..|.-||+.-|.+++.. ..++.+..|+|+.|.
T Consensus 146 ~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~ 181 (236)
T PRK06483 146 IAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALIL 181 (236)
T ss_pred ccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcee
Confidence 57999999999998765 236889999999874
No 200
>PRK01371 sec-independent translocase; Provisional
Probab=25.85 E-value=1.4e+02 Score=24.53 Aligned_cols=75 Identities=15% Similarity=0.139 Sum_probs=37.5
Q ss_pred HHhcCCChHHHHHHHHHHhHHhhhhchhcceEEEechhHHHHHhcCCccccccccccCCCCCHHHHHHHHHHHHHHHHcC
Q psy3027 176 ASLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWEYYAEAMGLGLRVYLVH 255 (300)
Q Consensus 176 ~~l~G~kp~l~k~~~k~~~~~~~~~~f~~~~w~F~~~n~~~L~~~l~~~D~~~F~fD~~~idW~~Y~~~~~~Girkyllk 255 (300)
+-++|-+ ++-.+.|.+.++...++-+.+ +-...+.+.+.++ ...++|++|=-+.+ +||+++.
T Consensus 17 llvfGPe-KLP~~ar~lg~~ir~~R~~~~-------~ak~~i~~Elg~e--------f~d~d~r~l~Pr~~--vrk~l~d 78 (137)
T PRK01371 17 VLVFGPD-KLPKAARDAGRTLRQLREMAN-------NARNDLRSELGPE--------FADLDLRDLNPKTF--VRKHLLE 78 (137)
T ss_pred hheeCch-HHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHhcch--------hcccchhhcCHHHH--HHHHHhh
Confidence 3456632 344444455444443333322 2234445555443 33456766543333 5788888
Q ss_pred CCCCChHHHHHHH
Q psy3027 256 DDIHTLPAARKKY 268 (300)
Q Consensus 256 e~~~~~~~a~~~~ 268 (300)
++.+.+...+...
T Consensus 79 ~~~~~~~~~~~~~ 91 (137)
T PRK01371 79 DLDDDIDEIKLGL 91 (137)
T ss_pred cchhhhhhhhhhH
Confidence 8776665544443
No 201
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=25.66 E-value=70 Score=28.21 Aligned_cols=38 Identities=11% Similarity=0.071 Sum_probs=30.1
Q ss_pred CcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeeccCC
Q psy3027 6 PNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTYRE 43 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~~e 43 (300)
...|+-||+..|.+++.. ..++-+..|+|+.|..+..+
T Consensus 156 ~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 198 (265)
T PRK07097 156 VSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTA 198 (265)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchh
Confidence 357999999999988776 23799999999988765443
No 202
>PRK07677 short chain dehydrogenase; Provisional
Probab=25.56 E-value=79 Score=27.59 Aligned_cols=33 Identities=18% Similarity=0.113 Sum_probs=26.5
Q ss_pred cHHHHHHHHHHHHHHH----hc--CCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCK----EG--KGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~----~~--~~lPv~IvRPsiV~~ 39 (300)
..|+-||+..|.+++. .. .++++..++|+.|..
T Consensus 149 ~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~ 187 (252)
T PRK07677 149 IHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIER 187 (252)
T ss_pred cchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeeccccc
Confidence 4699999998888875 22 389999999998863
No 203
>PF00017 SH2: SH2 domain; InterPro: IPR000980 The Src homology 2 (SH2) domain is a protein domain of about 100 amino-acid residues first identified as a conserved sequence region between the oncoproteins Src and Fps []. Similar sequences were later found in many other intracellular signal-transducing proteins []. SH2 domains function as regulatory modules of intracellular signalling cascades by interacting with high affinity to phosphotyrosine-containing target peptides in a sequence-specific, SH2 domains recognise between 3-6 residues C-terminal to the phosphorylated tyrosine in a fashion that differs from one SH2 domain to another, and strictly phosphorylation-dependent manner [, , , ]. They are found in a wide variety of protein contexts e.g., in association with catalytic domains of phospholipase Cy (PLCy) and the non-receptor protein tyrosine kinases; within structural proteins such as fodrin and tensin; and in a group of small adaptor molecules, i.e Crk and Nck. The domains are frequently found as repeats in a single protein sequence and will then often bind both mono- and di-phosphorylated substrates. The structure of the SH2 domain belongs to the alpha+beta class, its overall shape forming a compact flattened hemisphere. The core structural elements comprise a central hydrophobic anti-parallel beta-sheet, flanked by 2 short alpha-helices. The loop between strands 2 and 3 provides many of the binding interactions with the phosphate group of its phosphopeptide ligand, and is hence designated the phosphate binding loop, the phosphorylated ligand binds perpendicular to the beta-sheet and typically interacts with the phosphate binding loop and a hydrophobic binding pocket that interacts with a pY+3 side chain. The N- and C-termini of the domain are close together in space and on the opposite face from the phosphopeptide binding surface and it has been speculated that this has facilitated their integration into surface-exposed regions of host proteins [].; GO: 0005515 protein binding; PDB: 1M27_A 1KA6_A 1D4W_B 1D4T_A 1D1Z_B 1KA7_A 1UUR_A 1UUS_A 1BLJ_A 1BLK_A ....
Probab=25.50 E-value=81 Score=22.23 Aligned_cols=23 Identities=30% Similarity=0.426 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHhcCCCCEEEeccc
Q psy3027 12 TKALAEDVLCKEGKGLPLAVLRPA 35 (300)
Q Consensus 12 TK~~aE~lv~~~~~~lPv~IvRPs 35 (300)
||..||+++.+ ...--.-+||+|
T Consensus 7 sr~~Ae~~L~~-~~~~G~FLvR~s 29 (77)
T PF00017_consen 7 SRQEAERLLMQ-GKPDGTFLVRPS 29 (77)
T ss_dssp HHHHHHHHHHT-TSSTTEEEEEEE
T ss_pred CHHHHHHHHHh-cCCCCeEEEEec
Confidence 78999999998 445567899998
No 204
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=25.44 E-value=64 Score=28.23 Aligned_cols=33 Identities=18% Similarity=0.206 Sum_probs=26.6
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~ 39 (300)
..|.-||+..|.+++..+ .++.+..++|+.|-.
T Consensus 150 ~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t 187 (255)
T PRK06463 150 TFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVET 187 (255)
T ss_pred cHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCC
Confidence 459999999888887652 379999999997754
No 205
>PF04272 Phospholamban: Phospholamban; InterPro: IPR005984 Phospholamban (PLB) is a small protein (52 amino acids) that regulates the affinity of the cardiac sarcoplasmic reticulum Ca2+-ATPase (SERCA2a) for calcium. PLB is present in cardiac myocytes, in slow-twitch and smooth muscle and is expressed also in aorta endothelial cells in which it could play a role in tissue relaxation. The phosphorylation/dephosphorylation of phospholamban removes and restores, respectively, its inhibitory activity on SERCA2a. It has in fact been shown that phospholamban, in its non-phosphorylated form, binds to SERCA2a and inhibits this pump by lowering its affinity for Ca2+, whereas the phosphorylated form does not exert the inhibition. PLB is phosphorylated at two sites, namely at Ser-16 for a cAMP-dependent phosphokinase and at Thr-17 for a Ca2+/calmodulin-dependent phosphokinase, phosphorylation at Ser-16 being a prerequisite for the phosphorylation at Thr-17. The structure of a 36-amino-acid-long N-terminal fragment of human phospholamban phosphorylated at Ser-16 and Thr-17 and Cys36Ser mutated was determined from nuclear magnetic resonance data. The peptide assumes a conformation characterised by two alpha-helices connected by an irregular strand, which comprises the amino acids from Arg-13 to Pro-21. The proline is in a trans conformation. The two phosphate groups on Ser-16 and Thr-17 are shown to interact preferably with the side chains of Arg-14 and Arg-13, respectively [].; GO: 0005246 calcium channel regulator activity, 0042030 ATPase inhibitor activity, 0006816 calcium ion transport, 0016020 membrane; PDB: 1N7L_A 1FJP_A 1FJK_A 2HYN_C 1ZLL_D 1PLP_A 3O7L_I.
Probab=25.28 E-value=2.1e+02 Score=18.84 Aligned_cols=16 Identities=31% Similarity=0.486 Sum_probs=12.8
Q ss_pred CCCChHHHHHHHHHHH
Q psy3027 257 DIHTLPAARKKYQRLY 272 (300)
Q Consensus 257 ~~~~~~~a~~~~~~l~ 272 (300)
..+-.|+||+++..++
T Consensus 17 tiev~~qa~qnlqelf 32 (52)
T PF04272_consen 17 TIEVPQQARQNLQELF 32 (52)
T ss_dssp TSSSCHHHHHHHHHHH
T ss_pred hccCCHHHHHHHHHHH
Confidence 4566799999999874
No 206
>PRK07814 short chain dehydrogenase; Provisional
Probab=25.19 E-value=76 Score=28.02 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=26.1
Q ss_pred CcHHHHHHHHHHHHHHHhc----CCCCEEEecccEEee
Q psy3027 6 PNTYTFTKALAEDVLCKEG----KGLPLAVLRPAVIVS 39 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~----~~lPv~IvRPsiV~~ 39 (300)
-+.|+-||+..|.+++... .++.+..++|+.|..
T Consensus 157 ~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t 194 (263)
T PRK07814 157 FAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILT 194 (263)
T ss_pred CchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcC
Confidence 3579999999999887652 367888888877653
No 207
>KOG2774|consensus
Probab=25.17 E-value=1.4e+02 Score=27.23 Aligned_cols=111 Identities=21% Similarity=0.174 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCCccccccCCCChHHHHH-HHhhcceeeeccCCCcccceeccc
Q psy3027 8 TYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV-GIATGVLHTHLINLNTVTDMVPST 84 (300)
Q Consensus 8 tYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~-~~~~G~l~~~~~~~~~~~diVPVD 84 (300)
-|+-||--||-+=.-+ +-++-.--.|-+-|+++.. |=-|-+| | +.+++. +.-+|.. +-+..+|.++.+....
T Consensus 183 IYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~-pgggttd--y-a~A~f~~Al~~gk~-tCylrpdtrlpmmy~~ 257 (366)
T KOG2774|consen 183 IYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATK-PGGGTTD--Y-AIAIFYDALQKGKH-TCYLRPDTRLPMMYDT 257 (366)
T ss_pred eechhHHHHHHHHHHHHhhcCccceecccCcccccCC-CCCCcch--h-HHHHHHHHHHcCCc-ccccCCCccCceeehH
Confidence 4899999998765433 2256666667665555433 2222222 1 122332 3334553 5666889998888888
Q ss_pred cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHH
Q psy3027 85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATV 132 (300)
Q Consensus 85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~ 132 (300)
.|.. +|.......+ + -. .++||++.- ..|-+|+.+. .+.
T Consensus 258 dc~~~~~~~~~a~~~--~---lk-rr~ynvt~~---sftpee~~~~~~~~ 298 (366)
T KOG2774|consen 258 DCMASVIQLLAADSQ--S---LK-RRTYNVTGF---SFTPEEIADAIRRV 298 (366)
T ss_pred HHHHHHHHHHhCCHH--H---hh-hheeeecee---ccCHHHHHHHHHhh
Confidence 7777 5544322221 1 23 579999864 4677888877 543
No 208
>PF09889 DUF2116: Uncharacterized protein containing a Zn-ribbon (DUF2116); InterPro: IPR019216 This entry contains various hypothetical prokaryotic proteins whose functions are unknown. They contain a conserved zinc ribbon motif in the N-terminal part and a predicted transmembrane segment in the C-terminal part.
Probab=24.82 E-value=91 Score=21.73 Aligned_cols=18 Identities=6% Similarity=0.139 Sum_probs=9.4
Q ss_pred hHHHHHHHHHHHHHHHHH
Q psy3027 261 LPAARKKYQRLYIAHCAL 278 (300)
Q Consensus 261 ~~~a~~~~~~l~~~~~~~ 278 (300)
..+.+++.++.+++-.++
T Consensus 28 ~~k~qk~~~~~~~i~~~~ 45 (59)
T PF09889_consen 28 YRKRQKRMRKTQYIFFGI 45 (59)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 445556666555554443
No 209
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=24.55 E-value=71 Score=28.36 Aligned_cols=35 Identities=14% Similarity=0.227 Sum_probs=28.1
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~ 41 (300)
..|+-||+..|.+++.. ..++.+..++|+.|....
T Consensus 172 ~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~ 211 (278)
T PRK08277 172 PAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQ 211 (278)
T ss_pred chhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcc
Confidence 47999999999888765 237999999999887653
No 210
>PRK08226 short chain dehydrogenase; Provisional
Probab=24.55 E-value=78 Score=27.76 Aligned_cols=35 Identities=17% Similarity=0.302 Sum_probs=27.6
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeecc
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~ 41 (300)
..|+-||+..|.+++... .++.+..++|+.|....
T Consensus 153 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~ 192 (263)
T PRK08226 153 TAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPM 192 (263)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHH
Confidence 479999998888886552 37999999999886643
No 211
>PRK07478 short chain dehydrogenase; Provisional
Probab=24.05 E-value=69 Score=27.99 Aligned_cols=33 Identities=18% Similarity=0.160 Sum_probs=26.5
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~ 39 (300)
..|.-||+..|.+++.. ..++.+..|+|+.|-.
T Consensus 155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t 192 (254)
T PRK07478 155 AAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDT 192 (254)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccC
Confidence 47999999999888764 2368999999998754
No 212
>PRK07856 short chain dehydrogenase; Provisional
Probab=23.87 E-value=82 Score=27.48 Aligned_cols=34 Identities=9% Similarity=0.047 Sum_probs=25.9
Q ss_pred CcHHHHHHHHHHHHHHHhc----CCCCEEEecccEEee
Q psy3027 6 PNTYTFTKALAEDVLCKEG----KGLPLAVLRPAVIVS 39 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~----~~lPv~IvRPsiV~~ 39 (300)
-..|.-||+..|.+++... ..+-+..++|+.|..
T Consensus 145 ~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t 182 (252)
T PRK07856 145 TAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRT 182 (252)
T ss_pred CchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccC
Confidence 3689999999999997753 346777788887754
No 213
>PRK07041 short chain dehydrogenase; Provisional
Probab=23.68 E-value=81 Score=26.93 Aligned_cols=34 Identities=9% Similarity=0.021 Sum_probs=25.5
Q ss_pred CcHHHHHHHHHHHHHHHhc---CCCCEEEecccEEee
Q psy3027 6 PNTYTFTKALAEDVLCKEG---KGLPLAVLRPAVIVS 39 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~---~~lPv~IvRPsiV~~ 39 (300)
-+.|+-||+..|.+++... .++.+..++|+.|..
T Consensus 134 ~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t 170 (230)
T PRK07041 134 GVLQGAINAALEALARGLALELAPVRVNTVSPGLVDT 170 (230)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCceEEEEeeccccc
Confidence 4679999999999987753 356777777776643
No 214
>PRK06198 short chain dehydrogenase; Provisional
Probab=23.61 E-value=77 Score=27.69 Aligned_cols=35 Identities=9% Similarity=0.073 Sum_probs=27.9
Q ss_pred CcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeec
Q psy3027 6 PNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~ 40 (300)
.+.|.-||+..|.+.+.. ..++.++.++|+.+.+.
T Consensus 154 ~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~ 193 (260)
T PRK06198 154 LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATE 193 (260)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCc
Confidence 468999999999988754 24689999999887654
No 215
>TIGR01294 P_lamban phospholamban. This model represents the short (52 residue) transmembrane phosphoprotein phospholamban. Phospholamban, in its unphosphorylated form, inhibits SERCA2, the cardiac sarcoplasmic reticulum Ca-ATPase.
Probab=23.55 E-value=2.2e+02 Score=18.67 Aligned_cols=17 Identities=35% Similarity=0.522 Sum_probs=13.0
Q ss_pred CCCChHHHHHHHHHHHH
Q psy3027 257 DIHTLPAARKKYQRLYI 273 (300)
Q Consensus 257 ~~~~~~~a~~~~~~l~~ 273 (300)
..+.-|+||+++..+++
T Consensus 17 ~ie~~~qar~~lq~lfv 33 (52)
T TIGR01294 17 TIEMPQQARQNLQNLFI 33 (52)
T ss_pred hccCCHHHHHHHHHHHH
Confidence 35667999999998743
No 216
>PRK07576 short chain dehydrogenase; Provisional
Probab=23.22 E-value=85 Score=27.78 Aligned_cols=33 Identities=15% Similarity=0.132 Sum_probs=26.7
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~ 39 (300)
..|+-||+..|++++.. ..++.+..++|+.|.+
T Consensus 155 ~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~ 192 (264)
T PRK07576 155 AHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAG 192 (264)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccC
Confidence 46999999999988764 2478999999997754
No 217
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=22.97 E-value=85 Score=27.60 Aligned_cols=34 Identities=15% Similarity=0.243 Sum_probs=27.2
Q ss_pred CcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEee
Q psy3027 6 PNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVS 39 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~ 39 (300)
...|+-||+..+.+++... .++.+..|+|+.|-.
T Consensus 165 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t 203 (256)
T PRK12859 165 ELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDT 203 (256)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccC
Confidence 3679999999999977652 379999999987654
No 218
>PRK08589 short chain dehydrogenase; Validated
Probab=22.77 E-value=1e+02 Score=27.34 Aligned_cols=35 Identities=14% Similarity=0.208 Sum_probs=28.4
Q ss_pred CcHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeec
Q psy3027 6 PNTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~ 40 (300)
...|.-||+..|.+++.. ..++.+..+.|+.|...
T Consensus 151 ~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~ 190 (272)
T PRK08589 151 RSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETP 190 (272)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCc
Confidence 467999999999988775 24799999999987643
No 219
>PF08452 DNAP_B_exo_N: DNA polymerase family B exonuclease domain, N-terminal; InterPro: IPR013660 This domain is found in viral DNA polymerases to the N terminus of DNA polymerase family B exonuclease domains (IPR006133 from INTERPRO). ; GO: 0003887 DNA-directed DNA polymerase activity
Probab=22.68 E-value=26 Score=19.17 Aligned_cols=10 Identities=10% Similarity=0.474 Sum_probs=7.6
Q ss_pred ccCCCCCHHH
Q psy3027 231 FDMGQMKWEY 240 (300)
Q Consensus 231 fD~~~idW~~ 240 (300)
.|++++||=+
T Consensus 1 MeikCiNWFE 10 (22)
T PF08452_consen 1 MEIKCINWFE 10 (22)
T ss_pred CccEEeehhh
Confidence 3789999944
No 220
>PRK07063 short chain dehydrogenase; Provisional
Probab=22.59 E-value=88 Score=27.38 Aligned_cols=34 Identities=12% Similarity=0.136 Sum_probs=26.7
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeec
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVST 40 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~ 40 (300)
..|.-||+..|.+++.. ..++.+..|+|+.|-..
T Consensus 156 ~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~ 194 (260)
T PRK07063 156 FPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQ 194 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCh
Confidence 36999999988888665 23799999999987543
No 221
>KOG4039|consensus
Probab=22.55 E-value=59 Score=28.33 Aligned_cols=44 Identities=20% Similarity=0.295 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccc-cccCCC
Q psy3027 9 YTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRG-WIDNVY 53 (300)
Q Consensus 9 Yt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pG-w~d~~~ 53 (300)
|-.+|-.-|+-|.+.. ==-++|+||+.+.+...|--+| |..++.
T Consensus 142 Y~k~KGEvE~~v~eL~-F~~~~i~RPG~ll~~R~esr~geflg~~~ 186 (238)
T KOG4039|consen 142 YMKMKGEVERDVIELD-FKHIIILRPGPLLGERTESRQGEFLGNLT 186 (238)
T ss_pred eeeccchhhhhhhhcc-ccEEEEecCcceecccccccccchhhhee
Confidence 6678888888776652 1258999999999988877664 766654
No 222
>KOG4743|consensus
Probab=22.48 E-value=24 Score=30.56 Aligned_cols=21 Identities=24% Similarity=0.555 Sum_probs=16.8
Q ss_pred HHHHHhcCCccccccccccCC
Q psy3027 214 VQALFNKLDPEDQELFFFDMG 234 (300)
Q Consensus 214 ~~~L~~~l~~~D~~~F~fD~~ 234 (300)
.++.+++|.++|++.||||..
T Consensus 35 l~s~l~~m~~e~~~KWnFDFq 55 (195)
T KOG4743|consen 35 LNSRLERMNEEDQQKWNFDFQ 55 (195)
T ss_pred HHHHHHHHHHHHHhccCcccc
Confidence 456677888899999999874
No 223
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=22.34 E-value=73 Score=27.39 Aligned_cols=33 Identities=18% Similarity=0.166 Sum_probs=23.3
Q ss_pred cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~ 39 (300)
..|+-||+-.+.+++.. ..+++++.++|+.+..
T Consensus 150 ~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t 187 (245)
T PRK12936 150 ANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIES 187 (245)
T ss_pred cchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcC
Confidence 46999998555555432 2479999999997644
No 224
>PRK06924 short chain dehydrogenase; Provisional
Probab=22.23 E-value=67 Score=27.89 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=25.4
Q ss_pred cHHHHHHHHHHHHHHHhc-------CCCCEEEecccEEee
Q psy3027 7 NTYTFTKALAEDVLCKEG-------KGLPLAVLRPAVIVS 39 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-------~~lPv~IvRPsiV~~ 39 (300)
..|.-||+..|++++... .++.+..|+|+.|-.
T Consensus 152 ~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t 191 (251)
T PRK06924 152 SAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDT 191 (251)
T ss_pred HHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCcccc
Confidence 469999999999986542 257788889987754
No 225
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=21.72 E-value=76 Score=27.71 Aligned_cols=36 Identities=11% Similarity=0.186 Sum_probs=28.3
Q ss_pred CcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeecc
Q psy3027 6 PNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTY 41 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~ 41 (300)
...|+-||+..|.+++..+ .++.+..++|+.|....
T Consensus 157 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~ 197 (256)
T PRK06124 157 DAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATET 197 (256)
T ss_pred ccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcc
Confidence 4689999999988876542 37999999999876543
No 226
>PRK08278 short chain dehydrogenase; Provisional
Probab=21.52 E-value=98 Score=27.58 Aligned_cols=29 Identities=21% Similarity=0.240 Sum_probs=24.3
Q ss_pred cHHHHHHHHHHHHHHHhc-----CCCCEEEeccc
Q psy3027 7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPA 35 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPs 35 (300)
..|..||+..|++++..+ .++.+..+.|+
T Consensus 162 ~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg 195 (273)
T PRK08278 162 TAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPR 195 (273)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCC
Confidence 589999999999988652 37888889887
No 227
>PF06956 RtcR: Regulator of RNA terminal phosphate cyclase; InterPro: IPR009715 RtcR is a sigma54-dependent enhancer binding protein [] that activates transcription of the rtcBA operon. The product of the rtcA gene is an RNA 3 -terminal phosphate cyclase []. This domain is found at the N terminus of the RtcR sequence. RtcR, and other sigma54-dependent activators, contain IPR002078 from INTERPRO in the central region of the protein sequence.
Probab=21.00 E-value=2.3e+02 Score=24.42 Aligned_cols=57 Identities=12% Similarity=0.125 Sum_probs=41.6
Q ss_pred CCCcccHhHHHHH-HHHcCCcCCcccccccceeeeecchHHHHHHHHHHh---hhhHHHHHH
Q psy3027 117 ARNPISWGKLDEL-ATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLH---TIPGFILDS 174 (300)
Q Consensus 117 ~~np~t~~~~~~~-~~~~~~~~P~~~~l~~P~~~~~~~~~~~~i~~~~~~---~lPa~~~D~ 174 (300)
-.+|-.++|++.. .+++. .+|++-----..+.+|+-...-+||.|++. ++||.++..
T Consensus 78 l~dPWDfeeVY~~l~dfa~-~Y~Fd~e~E~YlvHITTGTHVaQIc~FLL~Esr~lPa~LlQt 138 (183)
T PF06956_consen 78 LADPWDFEEVYAALHDFAR-GYPFDPENEDYLVHITTGTHVAQICWFLLTESRYLPARLLQT 138 (183)
T ss_pred cCCCccHHHHHHHHHHHHh-hCCCCCCCCceEEEecCCcHHHHHHHHHHHHhccccHHHhcc
Confidence 4589999999999 99999 999763222234567777777788877754 678876544
No 228
>PRK06194 hypothetical protein; Provisional
Probab=20.98 E-value=48 Score=29.63 Aligned_cols=18 Identities=11% Similarity=0.010 Sum_probs=15.3
Q ss_pred cHHHHHHHHHHHHHHHhc
Q psy3027 7 NTYTFTKALAEDVLCKEG 24 (300)
Q Consensus 7 NtYt~TK~~aE~lv~~~~ 24 (300)
+.|+-||+..|.+++..+
T Consensus 159 ~~Y~~sK~a~~~~~~~l~ 176 (287)
T PRK06194 159 GIYNVSKHAVVSLTETLY 176 (287)
T ss_pred cchHHHHHHHHHHHHHHH
Confidence 579999999999987653
No 229
>PHA02910 hypothetical protein; Provisional
Probab=20.18 E-value=54 Score=26.16 Aligned_cols=21 Identities=29% Similarity=0.623 Sum_probs=17.6
Q ss_pred CcHHHHHHHHHHHHHHHhcCCCCE
Q psy3027 6 PNTYTFTKALAEDVLCKEGKGLPL 29 (300)
Q Consensus 6 pNtYt~TK~~aE~lv~~~~~~lPv 29 (300)
|..|..||..+|.|... +||.
T Consensus 82 psnyshskyvceklmns---klpt 102 (171)
T PHA02910 82 PSNYSHSKYVCEKLMNS---KLPT 102 (171)
T ss_pred CcccchhHHHHHHHhcc---cCCc
Confidence 78899999999999875 5664
Done!