BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3029
(617 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|157128524|ref|XP_001661468.1| low-Mr GTP-binding protein Rab31, putative [Aedes aegypti]
gi|108872544|gb|EAT36769.1| AAEL011171-PA [Aedes aegypti]
Length = 242
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 117/188 (62%), Positives = 149/188 (79%), Gaps = 4/188 (2%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+VVRY+ +++ ISPTIGASFFT K+N+ + KVK+QVWDTAGQERF++MAP+Y
Sbjct: 15 GVGKTSLVVRYVSNVYTKEISPTIGASFFTCKVNLEDFKVKMQVWDTAGQERFKAMAPLY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNANAALLVFD+TQY+SF IK+WV+EL+RNV EP+VL +VGNK DLE R V+REEA
Sbjct: 75 YRNANAALLVFDLTQYNSFVEIKSWVQELQRNVQEPMVLSLVGNKLDLEEKRAVSREEAA 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNIT----SA 291
Y+ SIGG Y+ETSALQDQGIE VF++++ GLI LS E + S R SD++ S+
Sbjct: 135 LYATSIGGNYFETSALQDQGIEQVFISIAVGLIKLSGEQICPSLKRYESSDSLVLSGYSS 194
Query: 292 NPRGVVEI 299
GVV++
Sbjct: 195 GMNGVVQM 202
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 37/44 (84%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS+VVRY+ +++ ISPTIGASFFT K+N+ + KVK+Q+
Sbjct: 15 GVGKTSLVVRYVSNVYTKEISPTIGASFFTCKVNLEDFKVKMQV 58
>gi|170037970|ref|XP_001846827.1| low-Mr GTP-binding protein Rab31 [Culex quinquefasciatus]
gi|167881359|gb|EDS44742.1| low-Mr GTP-binding protein Rab31 [Culex quinquefasciatus]
Length = 240
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 115/188 (61%), Positives = 150/188 (79%), Gaps = 4/188 (2%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+VVRY+ +++ +SPTIGASFFT K+N+ + KVK+QVWDTAGQERF++MAP+Y
Sbjct: 15 GVGKTSLVVRYVSNVYTKEVSPTIGASFFTCKVNLEDFKVKMQVWDTAGQERFKAMAPLY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNANAALLVFD+TQY+SF IKTWV+EL+RNV EP+VL +VGNK DLE+ R V+REEA
Sbjct: 75 YRNANAALLVFDLTQYNSFVEIKTWVQELQRNVQEPMVLSLVGNKLDLEAKRAVSREEAA 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNIT----SA 291
Y+ SIGG Y+ETSALQDQGIE VF++++ GLI +S E + S R SD++ ++
Sbjct: 135 LYATSIGGNYFETSALQDQGIEQVFISIAVGLIKMSGEQICPSFKRYESSDSLVLNGYAS 194
Query: 292 NPRGVVEI 299
GVV++
Sbjct: 195 GMNGVVQM 202
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 37/44 (84%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS+VVRY+ +++ +SPTIGASFFT K+N+ + KVK+Q+
Sbjct: 15 GVGKTSLVVRYVSNVYTKEVSPTIGASFFTCKVNLEDFKVKMQV 58
>gi|158295454|ref|XP_316217.3| AGAP006159-PA [Anopheles gambiae str. PEST]
gi|157016045|gb|EAA10814.3| AGAP006159-PA [Anopheles gambiae str. PEST]
Length = 242
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 113/172 (65%), Positives = 144/172 (83%), Gaps = 1/172 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+VVRY+ +++ ISPTIGASFFT K+N+ + KVK+QVWDTAGQERF++MAP+Y
Sbjct: 15 GVGKTSLVVRYVSNVYTKEISPTIGASFFTCKVNLEDFKVKMQVWDTAGQERFKAMAPLY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNANAALLVFD+TQY+SF IK WV+EL+RNV EP+VL +VGNK DLE+ R V+REEA
Sbjct: 75 YRNANAALLVFDLTQYNSFNEIKGWVQELQRNVQEPMVLSLVGNKLDLEAKRAVSREEAM 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDN 287
Y+ SIGG Y+ETSAL DQGIE VF++++ GLI LS E + SSL+ Y+S++
Sbjct: 135 LYANSIGGNYFETSALHDQGIEQVFISIAVGLIKLSGEDV-CSSLKRYESND 185
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL--RTGLKVSKIPVPTR 397
GVGKTS+VVRY+ +++ ISPTIGASFFT K+N+ + KVK+Q+ G + K P
Sbjct: 15 GVGKTSLVVRYVSNVYTKEISPTIGASFFTCKVNLEDFKVKMQVWDTAGQERFKAMAPLY 74
Query: 398 NREGATTGRITEPDTMNNNNKKKNRVATTGRPVR 431
R + + N+ N+ K V R V+
Sbjct: 75 YRNANAALLVFDLTQYNSFNEIKGWVQELQRNVQ 108
>gi|383857603|ref|XP_003704294.1| PREDICTED: ras-related protein RabJ-like [Megachile rotundata]
Length = 217
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 140/172 (81%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTSM++RY+GK F+ H+ PTIGASFFT K+NV K+ LQVWDTAGQERFRSMAPMY
Sbjct: 15 GVGKTSMIIRYVGKAFNEHVDPTIGASFFTCKLNVENVKIMLQVWDTAGQERFRSMAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNANAA+LVFD+TQY++FAA+K WV EL+RNV++ +VL V+GNK+DL R+V+ EE
Sbjct: 75 YRNANAAMLVFDLTQYNTFAAMKGWVTELRRNVEDAMVLAVIGNKSDLIKERQVDAEEGR 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDN 287
Y+ +IG +Y+ETS LQD+GIE+VFL++ GL+ L+ + S+++Y+S N
Sbjct: 135 VYATNIGASYHETSVLQDEGIENVFLDIGMGLLRLASTEQDSMSIKIYESTN 186
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 36/44 (81%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTSM++RY+GK F+ H+ PTIGASFFT K+NV K+ LQ+
Sbjct: 15 GVGKTSMIIRYVGKAFNEHVDPTIGASFFTCKLNVENVKIMLQV 58
>gi|340723572|ref|XP_003400163.1| PREDICTED: ras-related protein RabJ-like [Bombus terrestris]
Length = 220
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 140/173 (80%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTSM++RYIGK ++ ++PTIGASFF K+N+ + + L+VWDTAGQERFRSMAPMY
Sbjct: 14 GVGKTSMIMRYIGKTYNSQVNPTIGASFFNCKLNIQDTGIMLRVWDTAGQERFRSMAPMY 73
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNANAA+LVFD+TQY++FAA+K WV EL+RNV+E LVL V+GNK+DL R+VN EE
Sbjct: 74 YRNANAAMLVFDLTQYNTFAAMKRWVTELRRNVEETLVLVVIGNKSDLIEKRQVNAEEGR 133
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNI 288
Y+ IG +Y+ETS LQ +GIE+VFL V++GL+ LS +++ +RVY+S N+
Sbjct: 134 LYATKIGASYHETSVLQGEGIENVFLTVARGLLGLSSTDRNSTPIRVYESTNL 186
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 35/44 (79%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTSM++RYIGK ++ ++PTIGASFF K+N+ + + L++
Sbjct: 14 GVGKTSMIMRYIGKTYNSQVNPTIGASFFNCKLNIQDTGIMLRV 57
>gi|380022458|ref|XP_003695062.1| PREDICTED: ras-related protein RabJ-like isoform 1 [Apis florea]
Length = 221
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 104/173 (60%), Positives = 139/173 (80%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+++RYIGK + H+SPTIGASFFT K+N+ ++ L+VWDTAGQERFRSMAPMY
Sbjct: 15 GVGKTSIIMRYIGKSCNEHLSPTIGASFFTCKLNLENARIMLRVWDTAGQERFRSMAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNANAA+LVFD+TQY++FAA+K WV EL+RNV+E + L V+GNK+DL R+V+ EE
Sbjct: 75 YRNANAAMLVFDLTQYNTFAAMKRWVTELRRNVEEVMTLVVIGNKSDLTKERQVDAEEGR 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNI 288
Y+ IG +YYETS LQ++GI++VFL + GL+ LS ++S+RVY+S N+
Sbjct: 135 VYATKIGASYYETSVLQNEGIKNVFLAIGNGLLKLSSTECDSTSIRVYESTNL 187
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 36/44 (81%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS+++RYIGK + H+SPTIGASFFT K+N+ ++ L++
Sbjct: 15 GVGKTSIIMRYIGKSCNEHLSPTIGASFFTCKLNLENARIMLRV 58
>gi|270010105|gb|EFA06553.1| hypothetical protein TcasGA2_TC009462 [Tribolium castaneum]
Length = 238
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 153/213 (71%), Gaps = 14/213 (6%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+GVGKTS V+RY+ FS HI+PT+GASFF+ K+ + + VKLQ+WDTAGQERF++MAPM
Sbjct: 28 IGVGKTSTVIRYVENSFSQHITPTVGASFFSCKLLIDDITVKLQIWDTAGQERFKAMAPM 87
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
+YRNANAAL+VFDIT SF +++ WV ELK+NVD P+VLCVVGNK+DL +R+VNR+EA
Sbjct: 88 FYRNANAALIVFDITLRQSFESMQGWVFELKQNVDNPMVLCVVGNKSDLAKNRQVNRDEA 147
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI-CLSQESLHTSSLRVYDSDNITSANP 293
Y+KSIG TY+E SA+ DQG+ VF +V++GLI L S H +L+VYDS+NI +
Sbjct: 148 IQYAKSIGATYHECSAMHDQGVGLVFDDVARGLIRLLGNSSDH--NLKVYDSENIDNIMA 205
Query: 294 RGVVEITPLSSLDTPPLTEAETAKFVVGLSINS 326
S L+ + ET V LSINS
Sbjct: 206 NS-------SELEATDTGKEET----VNLSINS 227
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
+GVGKTS V+RY+ FS HI+PT+GASFF+ K+ + + VKLQ+
Sbjct: 28 IGVGKTSTVIRYVENSFSQHITPTVGASFFSCKLLIDDITVKLQI 72
>gi|91085709|ref|XP_972846.1| PREDICTED: similar to AGAP006159-PA [Tribolium castaneum]
Length = 224
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 117/212 (55%), Positives = 153/212 (72%), Gaps = 14/212 (6%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS V+RY+ FS HI+PT+GASFF+ K+ + + VKLQ+WDTAGQERF++MAPM+
Sbjct: 15 GVGKTSTVIRYVENSFSQHITPTVGASFFSCKLLIDDITVKLQIWDTAGQERFKAMAPMF 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNANAAL+VFDIT SF +++ WV ELK+NVD P+VLCVVGNK+DL +R+VNR+EA
Sbjct: 75 YRNANAALIVFDITLRQSFESMQGWVFELKQNVDNPMVLCVVGNKSDLAKNRQVNRDEAI 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI-CLSQESLHTSSLRVYDSDNITSANPR 294
Y+KSIG TY+E SA+ DQG+ VF +V++GLI L S H +L+VYDS+NI +
Sbjct: 135 QYAKSIGATYHECSAMHDQGVGLVFDDVARGLIRLLGNSSDH--NLKVYDSENIDNI--- 189
Query: 295 GVVEITPLSSLDTPPLTEAETAKFVVGLSINS 326
+ S L+ + ET V LSINS
Sbjct: 190 ----MANSSELEATDTGKEET----VNLSINS 213
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS V+RY+ FS HI+PT+GASFF+ K+ + + VKLQ+
Sbjct: 15 GVGKTSTVIRYVENSFSQHITPTVGASFFSCKLLIDDITVKLQI 58
>gi|110761970|ref|XP_001122072.1| PREDICTED: ras-related protein RabJ-like [Apis mellifera]
Length = 221
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 101/173 (58%), Positives = 139/173 (80%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+++RYIGK + H++PTIGASFFT K+NV ++ L+VWDTAGQERF+SMAPMY
Sbjct: 15 GVGKTSIIMRYIGKSCNEHLNPTIGASFFTCKLNVENARIMLRVWDTAGQERFKSMAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNANAA+LVFD+TQY++FAA+K WV EL+RNV+E + L V+GNK+DL R+V+ EE
Sbjct: 75 YRNANAAMLVFDLTQYNTFAAMKRWVTELRRNVEEVMTLVVIGNKSDLTKERQVDAEEGR 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNI 288
Y+ IG +Y+ETS LQ++GI++VFL + GL+ LS ++S+R+Y+S N+
Sbjct: 135 VYATKIGASYHETSVLQNEGIKNVFLAIGSGLLKLSSTECDSTSIRIYESTNL 187
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 36/44 (81%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS+++RYIGK + H++PTIGASFFT K+NV ++ L++
Sbjct: 15 GVGKTSIIMRYIGKSCNEHLNPTIGASFFTCKLNVENARIMLRV 58
>gi|345490640|ref|XP_001602002.2| PREDICTED: ras-related protein RabJ-like [Nasonia vitripennis]
Length = 219
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 135/173 (78%), Gaps = 1/173 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ RYI F+H +PTIGASFFT KIN+ + ++K QVWDTAGQERFRSMAPMY
Sbjct: 15 GVGKTSLINRYINNAFNHQNNPTIGASFFTCKINLEDVRIKFQVWDTAGQERFRSMAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNANAA LVFDITQY+SF AIK+WV EL+RNV+EP+VL +VGNK DL R+V+ EE
Sbjct: 75 YRNANAAFLVFDITQYNSFTAIKSWVTELQRNVEEPMVLILVGNKVDLSEKRKVDSEECR 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLH-TSSLRVYDSDN 287
Y++SIG TY+E SAL D+G++ FL + GL+ LS +SL+VYDS++
Sbjct: 135 KYAESIGATYHEISALTDEGVDQAFLTAALGLVKLSNGDRDLLTSLKVYDSNS 187
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS++ RYI F+H +PTIGASFFT KIN+ + ++K Q+
Sbjct: 15 GVGKTSLINRYINNAFNHQNNPTIGASFFTCKINLEDVRIKFQV 58
>gi|350426704|ref|XP_003494518.1| PREDICTED: ras-related protein RabJ-like [Bombus impatiens]
Length = 220
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 101/173 (58%), Positives = 137/173 (79%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTSM++ YIGK ++ ++PTIGA FF K+N+ + + L++WDTAGQERFRSMAPMY
Sbjct: 14 GVGKTSMIMHYIGKTYNGQVNPTIGALFFNCKLNIQDTGIMLRIWDTAGQERFRSMAPMY 73
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNANAA+LVFD+TQY++FAA+K WV EL+RNV+E LVL V+GNK+DL R+VN EE
Sbjct: 74 YRNANAAMLVFDLTQYNTFAAMKRWVTELRRNVEEALVLAVIGNKSDLIEKRQVNAEEGR 133
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNI 288
Y+ IG +Y+ETS LQ +GIE+VFL V++GL+ L +++ +RVY+S N+
Sbjct: 134 LYATKIGASYHETSVLQGEGIENVFLTVARGLLGLPSTDHNSTPIRVYESTNL 186
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTSM++ YIGK ++ ++PTIGA FF K+N+ + + L++
Sbjct: 14 GVGKTSMIMHYIGKTYNGQVNPTIGALFFNCKLNIQDTGIMLRI 57
>gi|307177872|gb|EFN66832.1| Ras-related protein RabJ [Camponotus floridanus]
Length = 217
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/170 (59%), Positives = 137/170 (80%), Gaps = 3/170 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ RYIG ++SPTIGASFF K+N+G+ K+KL VWDTAGQERFRSMAPMY
Sbjct: 15 GVGKTSLIGRYIGNF--DNVSPTIGASFFNCKLNLGDMKIKLHVWDTAGQERFRSMAPMY 72
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNANAA+LVFD+TQY+SFAAIK WVKEL++NV++ +VL V+GNK+DL R+V+ EE
Sbjct: 73 YRNANAAMLVFDLTQYNSFAAIKGWVKELQQNVEDTMVLAVIGNKSDLH-QRQVDGEEGQ 131
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDS 285
Y+ SIG TY+E S L ++G+E VFL ++KGL+ + ++ +S++++DS
Sbjct: 132 KYATSIGATYHEISVLHNEGVETVFLAIAKGLLRMVSDNTDITSVKIFDS 181
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%), Gaps = 2/44 (4%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS++ RYIG ++SPTIGASFF K+N+G+ K+KL +
Sbjct: 15 GVGKTSLIGRYIGNF--DNVSPTIGASFFNCKLNLGDMKIKLHV 56
>gi|390335524|ref|XP_788644.2| PREDICTED: ras-related protein RabJ-like [Strongylocentrotus
purpuratus]
Length = 234
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 137/178 (76%), Gaps = 1/178 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+VVRY+GK+FS+ +SPT+GASFFT K+NV ++VKL +WDTAGQERF++MAPMY
Sbjct: 15 GVGKTSIVVRYVGKIFSNQVSPTVGASFFTFKMNVDNHRVKLHLWDTAGQERFKAMAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR ANAA +V+DIT +F +K W +EL++N+D P+V+C++GNK+DL R+V+ EE
Sbjct: 75 YRKANAAFIVYDITDSKTFENMKFWAEELEQNIDGPIVMCILGNKSDLADHRQVSSEEGL 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICL-SQESLHTSSLRVYDSDNITSAN 292
HY+ SIG ++ETSAL+D+GI + FL V+ LI L S S+ +++ YD+ SA+
Sbjct: 135 HYAASIGALFFETSALKDEGISEAFLRVALALISLASSTSISGMTVKPYDTSRRQSAD 192
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 39/44 (88%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS+VVRY+GK+FS+ +SPT+GASFFT K+NV ++VKL L
Sbjct: 15 GVGKTSIVVRYVGKIFSNQVSPTVGASFFTFKMNVDNHRVKLHL 58
>gi|405964669|gb|EKC30126.1| Ras-related protein Rab-21 [Crassostrea gigas]
Length = 293
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/162 (61%), Positives = 128/162 (79%), Gaps = 1/162 (0%)
Query: 114 WL-GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMA 172
W+ VGKTS+V+RY+G MFS +SPTIGASFFT K+ + ++KLQVWDTAGQERFRSMA
Sbjct: 87 WVSAVGKTSVVIRYVGGMFSKAVSPTIGASFFTYKLTLNNYRMKLQVWDTAGQERFRSMA 146
Query: 173 PMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNRE 232
PMYYR ANAA+LV+DIT SF IK WV ELK+NVD P+V+C+VGNK DLE SREVN +
Sbjct: 147 PMYYRKANAAMLVYDITSEDSFYDIKDWVSELKKNVDTPIVMCLVGNKNDLEESREVNVK 206
Query: 233 EAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQES 274
+A Y+ SIG ++ETSAL++ G+E+ FL V++ L+ L + S
Sbjct: 207 DAQEYADSIGALFHETSALKNVGVEEAFLQVAQQLVKLYESS 248
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 72/91 (79%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY+G MFS +SPTIGASFFT K+ + ++KLQVWDTAGQERFRSMAPMY
Sbjct: 3 AVGKTSVVIRYVGGMFSKAVSPTIGASFFTYKLTLNNYRMKLQVWDTAGQERFRSMAPMY 62
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKR 206
YR ANAA+LV+DIT SF IK WV + +
Sbjct: 63 YRKANAAMLVYDITSEDSFYDIKDWVSAVGK 93
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL--RTGLKVSKIPVPTR 397
VGKTS+V+RY+G MFS +SPTIGASFFT K+ + ++KLQ+ G + + P
Sbjct: 3 AVGKTSVVIRYVGGMFSKAVSPTIGASFFTYKLTLNNYRMKLQVWDTAGQERFRSMAPMY 62
Query: 398 NREGATTG---RITEPDTMNNNNKKKNRVATTGRPVRSRGGPDRLAINP 443
R+ IT D+ + + V T +R GG A++P
Sbjct: 63 YRKANAAMLVYDITSEDSFYDIKDWVSAVGKTSVVIRYVGGMFSKAVSP 111
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Query: 338 WL-GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
W+ VGKTS+V+RY+G MFS +SPTIGASFFT K+ + ++KLQ+
Sbjct: 87 WVSAVGKTSVVIRYVGGMFSKAVSPTIGASFFTYKLTLNNYRMKLQV 133
>gi|322795122|gb|EFZ17962.1| hypothetical protein SINV_05258 [Solenopsis invicta]
Length = 219
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 145/191 (75%), Gaps = 8/191 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ RY+G H SPTIGASFF KIN+ + K+KLQVWDTAGQERFRSMAPMY
Sbjct: 15 GVGKTSLIGRYLGNF--EHASPTIGASFFNCKINLDDMKIKLQVWDTAGQERFRSMAPMY 72
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRN+NAA+LVFD+TQY++FAAIK+WVKEL++NV+E +VL ++GNK+DL R+V+ EE
Sbjct: 73 YRNSNAAMLVFDLTQYNTFAAIKSWVKELQQNVEETMVLALIGNKSDLVQQRQVDGEEGQ 132
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQES--LHTSSLRVYDSDNITSAN- 292
Y+ +IG TY+E S L ++G+E VFL ++ L ++ ++ L+T +L++ DS+N ++
Sbjct: 133 RYATTIGATYHEISVLHNEGVESVFLAIAMSLRRMASDNNDLNT-TLKISDSNNFLRSDD 191
Query: 293 --PRGVVEITP 301
P VE +P
Sbjct: 192 MLPSPSVEESP 202
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS++ RY+G H SPTIGASFF KIN+ + K+KLQ+
Sbjct: 15 GVGKTSLIGRYLGNF--EHASPTIGASFFNCKINLDDMKIKLQV 56
>gi|332024332|gb|EGI64531.1| Ras-related protein RabJ [Acromyrmex echinatior]
Length = 219
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 134/172 (77%), Gaps = 2/172 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ RY+G + H+SPTI ASFF KIN+ + K+KLQVWDTAGQERFRSMAPMY
Sbjct: 15 GVGKTSLIGRYVGNV--EHVSPTIAASFFNCKINLEDVKIKLQVWDTAGQERFRSMAPMY 72
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR NAALLVFD+TQY +F AIK+WVKEL++NV+E +VL ++GNK+DL R+V+ EE
Sbjct: 73 YRTCNAALLVFDLTQYSTFVAIKSWVKELQQNVEETMVLVLIGNKSDLVQKRQVDGEEGR 132
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDN 287
Y+ +IG TY+E S L ++G++ VFL ++ GL ++ ++ ++L++ DS+N
Sbjct: 133 RYATTIGATYHEISVLYNEGVKTVFLAIAMGLRRMASDNNDNTTLKISDSNN 184
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%), Gaps = 2/44 (4%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS++ RY+G + H+SPTI ASFF KIN+ + K+KLQ+
Sbjct: 15 GVGKTSLIGRYVGNV--EHVSPTIAASFFNCKINLEDVKIKLQV 56
>gi|195347108|ref|XP_002040096.1| GM15536 [Drosophila sechellia]
gi|194135445|gb|EDW56961.1| GM15536 [Drosophila sechellia]
Length = 261
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 130/174 (74%), Gaps = 3/174 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHIS--PTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAP 173
GVGKT +V+RYI S PTI SFFT I + E K+KLQ+WDTAGQER+R+MAP
Sbjct: 15 GVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRAMAP 74
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNANAA+LVFD+TQY +F IK+W++EL RNV +P++L +VGNK D+++ R V+REE
Sbjct: 75 MYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREE 134
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDN 287
AF ++ SIG TY+ETS DQG+E VF++ ++GL+ L+ E + SLR + S +
Sbjct: 135 AFVFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEG-KSPSLRSFQSTD 187
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 340 GVGKTSMVVRYIGKMFSHHIS--PTIGASFFTAKINVGENKVKLQL 383
GVGKT +V+RYI S PTI SFFT I + E K+KLQ+
Sbjct: 15 GVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQI 60
>gi|260792539|ref|XP_002591272.1| hypothetical protein BRAFLDRAFT_216541 [Branchiostoma floridae]
gi|229276476|gb|EEN47283.1| hypothetical protein BRAFLDRAFT_216541 [Branchiostoma floridae]
Length = 142
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 115/140 (82%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+V+RY+GK+FS H+SPTIGASFFT K+ V + +VKLQ+WDTAGQERFRSMAPMY
Sbjct: 2 GVGKTSVVIRYVGKLFSKHVSPTIGASFFTFKMTVDDYRVKLQLWDTAGQERFRSMAPMY 61
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR ANAALLV+DIT SF I++WV ELK+NV+ +++CV+GNKTDL S REV RE+A
Sbjct: 62 YRKANAALLVYDITCRESFENIQSWVDELKKNVEGTIIMCVIGNKTDLVSRREVTREKAE 121
Query: 236 HYSKSIGGTYYETSALQDQG 255
Y+ SI YYETSAL + G
Sbjct: 122 QYADSINALYYETSALTNDG 141
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 39/44 (88%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS+V+RY+GK+FS H+SPTIGASFFT K+ V + +VKLQL
Sbjct: 2 GVGKTSVVIRYVGKLFSKHVSPTIGASFFTFKMTVDDYRVKLQL 45
>gi|195489180|ref|XP_002092628.1| GE11561 [Drosophila yakuba]
gi|194178729|gb|EDW92340.1| GE11561 [Drosophila yakuba]
Length = 261
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 132/174 (75%), Gaps = 3/174 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHIS--PTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAP 173
GVGKT +V+RYI S PTI SFFT I + E K+KLQ+WDTAGQER+R++AP
Sbjct: 15 GVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRAVAP 74
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNANAA+LVFD+TQY +FA IK+W++EL RNV +P++L +VGNK D+++ R V+REE
Sbjct: 75 MYYRNANAAILVFDLTQYKTFAEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREE 134
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDN 287
AF ++ SIG +Y+ETS DQG+E VF++ ++GL+ L+ E + SLR ++S +
Sbjct: 135 AFVFATSIGASYFETSTETDQGLEQVFISTAQGLVRLADEG-KSPSLRSFESTD 187
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 340 GVGKTSMVVRYIGKMFSHHIS--PTIGASFFTAKINVGENKVKLQL 383
GVGKT +V+RYI S PTI SFFT I + E K+KLQ+
Sbjct: 15 GVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQI 60
>gi|17864296|ref|NP_524713.1| RabX1 [Drosophila melanogaster]
gi|6649244|gb|AAF21440.1|AF209706_1 Rab-related GTP-binding protein Chrowded [Drosophila melanogaster]
gi|7291595|gb|AAF47018.1| RabX1 [Drosophila melanogaster]
gi|21483474|gb|AAM52712.1| LD47384p [Drosophila melanogaster]
gi|220946434|gb|ACL85760.1| chrw-PA [synthetic construct]
gi|220956146|gb|ACL90616.1| chrw-PA [synthetic construct]
Length = 261
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 130/174 (74%), Gaps = 3/174 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHIS--PTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAP 173
GVGKT +V+RYI S PTI SFFT I + E K+KLQ+WDTAGQER+R++AP
Sbjct: 15 GVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRAVAP 74
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNANAA+LVFD+TQY +F IK+W++EL RNV +P++L +VGNK D+++ R V+REE
Sbjct: 75 MYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREE 134
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDN 287
AF ++ SIG TY+ETS DQG+E VF++ ++GL+ L+ E + SLR + S +
Sbjct: 135 AFVFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEG-KSPSLRSFQSTD 187
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 340 GVGKTSMVVRYIGKMFSHHIS--PTIGASFFTAKINVGENKVKLQL 383
GVGKT +V+RYI S PTI SFFT I + E K+KLQ+
Sbjct: 15 GVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQI 60
>gi|195122072|ref|XP_002005536.1| GI19016 [Drosophila mojavensis]
gi|193910604|gb|EDW09471.1| GI19016 [Drosophila mojavensis]
Length = 259
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/172 (54%), Positives = 129/172 (75%), Gaps = 1/172 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +V++YI PTI SFFT I + + K+KLQ+WDTAGQERFR++APMY
Sbjct: 15 GVGKSRLVIKYIKNALHRSEEPTIAVSFFTCNIMLDDVKIKLQIWDTAGQERFRAVAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNANAA+LVFD+TQY +F IK+W++EL RNV +P++L +VGNK DL+S R V+R+EA+
Sbjct: 75 YRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDLQSQRAVSRDEAY 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDN 287
++ SIG TY+ETS DQG+E VFL+ + GL+ L+ E + SLR ++S +
Sbjct: 135 LFASSIGATYFETSTETDQGLEQVFLSTALGLVRLADEG-KSHSLRSFESTD 185
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK+ +V++YI PTI SFFT I + + K+KLQ+
Sbjct: 15 GVGKSRLVIKYIKNALHRSEEPTIAVSFFTCNIMLDDVKIKLQI 58
>gi|194885321|ref|XP_001976418.1| GG20024 [Drosophila erecta]
gi|190659605|gb|EDV56818.1| GG20024 [Drosophila erecta]
Length = 261
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 131/174 (75%), Gaps = 3/174 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHIS--PTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAP 173
GVGKT +V+RYI + PTI SFFT I + E K+KLQ+WDTAGQER+R++AP
Sbjct: 15 GVGKTRLVIRYIKNTLHRKENEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRAVAP 74
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNANAA+LVFD+TQY +F IK+W++EL RNV +P++L +VGNK D+++ R V+REE
Sbjct: 75 MYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQTQRAVSREE 134
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDN 287
AF ++ SIG TY+ETS DQG+E VF++ ++GL+ L+ E + SLR ++S +
Sbjct: 135 AFVFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEG-KSPSLRSFESTD 187
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 340 GVGKTSMVVRYIGKMFSHHIS--PTIGASFFTAKINVGENKVKLQL 383
GVGKT +V+RYI + PTI SFFT I + E K+KLQ+
Sbjct: 15 GVGKTRLVIRYIKNTLHRKENEVPTIAVSFFTCNIILDEVKIKLQI 60
>gi|195026226|ref|XP_001986210.1| GH20651 [Drosophila grimshawi]
gi|193902210|gb|EDW01077.1| GH20651 [Drosophila grimshawi]
Length = 259
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 128/172 (74%), Gaps = 1/172 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +V++YI PTI SFFT I + K+KLQ+WDTAGQERFR++APMY
Sbjct: 15 GVGKSRLVIKYIKNALHRSEEPTIAVSFFTCNIILENVKIKLQIWDTAGQERFRAVAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNANAA+LVFD+TQY +F IK+W++EL RNV +P++L +VGNK D++S R V+R+EA+
Sbjct: 75 YRNANAAILVFDMTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQSQRAVSRDEAY 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDN 287
++ SIG TY+ETS DQG+E VFL+ + GL+ L+ E + SLR ++S +
Sbjct: 135 LFASSIGATYFETSTETDQGLEQVFLSTAMGLVRLADEG-KSHSLRSFESSD 185
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK+ +V++YI PTI SFFT I + K+KLQ+
Sbjct: 15 GVGKSRLVIKYIKNALHRSEEPTIAVSFFTCNIILENVKIKLQI 58
>gi|125809197|ref|XP_001361028.1| GA17740 [Drosophila pseudoobscura pseudoobscura]
gi|54636201|gb|EAL25604.1| GA17740 [Drosophila pseudoobscura pseudoobscura]
Length = 261
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 130/174 (74%), Gaps = 3/174 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHIS--PTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAP 173
GVGKT +V+RYI S PTI SFFT I + E K+KLQ+WDTAGQER+R++AP
Sbjct: 15 GVGKTRLVIRYIKNTLHRSESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRAVAP 74
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNANAA+LVFD+TQY +F IK+W++EL RNV +P++L +VGNK D+++ R V+R+E
Sbjct: 75 MYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSRDE 134
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDN 287
AF ++ SIG TY+ETS DQG+E VFL+ + G++ L+ E + SLR ++S +
Sbjct: 135 AFLFATSIGATYFETSTETDQGLEQVFLSTALGMVRLADEG-KSHSLRSFESTD 187
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 340 GVGKTSMVVRYIGKMFSHHIS--PTIGASFFTAKINVGENKVKLQL 383
GVGKT +V+RYI S PTI SFFT I + E K+KLQ+
Sbjct: 15 GVGKTRLVIRYIKNTLHRSESEVPTIAVSFFTCNIILDEVKIKLQI 60
>gi|195154485|ref|XP_002018152.1| GL17555 [Drosophila persimilis]
gi|194113948|gb|EDW35991.1| GL17555 [Drosophila persimilis]
Length = 261
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 130/174 (74%), Gaps = 3/174 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHIS--PTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAP 173
GVGKT +V+RYI S PTI SFFT I + E K+KLQ+WDTAGQER+R++AP
Sbjct: 15 GVGKTRLVIRYIKNTLHRSESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRAVAP 74
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNANAA+LVFD+TQY +F IK+W++EL RNV +P++L +VGNK D+++ R V+R+E
Sbjct: 75 MYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSRDE 134
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDN 287
AF ++ SIG TY+ETS DQG+E VFL+ + G++ L+ E + SLR ++S +
Sbjct: 135 AFLFATSIGATYFETSTETDQGLEQVFLSTALGMVRLADEG-KSHSLRSFESTD 187
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 340 GVGKTSMVVRYIGKMFSHHIS--PTIGASFFTAKINVGENKVKLQL 383
GVGKT +V+RYI S PTI SFFT I + E K+KLQ+
Sbjct: 15 GVGKTRLVIRYIKNTLHRSESEVPTIAVSFFTCNIILDEVKIKLQI 60
>gi|291231118|ref|XP_002735512.1| PREDICTED: low-Mr GTP-binding protein Rab31, putative-like
[Saccoglossus kowalevskii]
Length = 154
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/140 (65%), Positives = 116/140 (82%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+V+RY+ K FS ++PTIGASFFT K+N+ E++VKLQ+WDTAGQERFRSMAPMY
Sbjct: 15 GVGKTSVVLRYVSKHFSQKVTPTIGASFFTIKLNIDEHRVKLQLWDTAGQERFRSMAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR ANAALLV+DIT +F AIK+WV EL+RNVDE ++LCV+GNK DL R+V++EE
Sbjct: 75 YRKANAALLVYDITVPDTFNAIKSWVDELQRNVDEGIILCVLGNKCDLTEHRQVSKEEGQ 134
Query: 236 HYSKSIGGTYYETSALQDQG 255
Y+ SIG ++ETSAL ++G
Sbjct: 135 DYATSIGALFFETSALTNEG 154
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL--RTGLKVSKIPVPTR 397
GVGKTS+V+RY+ K FS ++PTIGASFFT K+N+ E++VKLQL G + + P
Sbjct: 15 GVGKTSVVLRYVSKHFSQKVTPTIGASFFTIKLNIDEHRVKLQLWDTAGQERFRSMAPMY 74
Query: 398 NREGATT---GRITEPDTMN 414
R+ IT PDT N
Sbjct: 75 YRKANAALLVYDITVPDTFN 94
>gi|194755088|ref|XP_001959824.1| GF11842 [Drosophila ananassae]
gi|190621122|gb|EDV36646.1| GF11842 [Drosophila ananassae]
Length = 261
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 129/174 (74%), Gaps = 3/174 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHIS--PTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAP 173
GVGKT +V+RYI S PTI SFFT I + E K+KLQ+WDTAGQER+R++AP
Sbjct: 15 GVGKTRLVIRYIKNTLHRSESEVPTIAVSFFTCNIFLDEVKIKLQIWDTAGQERYRAVAP 74
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNANAA+LVFD+TQY +F IK+W++EL RNV +P++ +VGNK D+++ R V+R+E
Sbjct: 75 MYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMIFTLVGNKMDMQAQRAVSRDE 134
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDN 287
AF ++ SIG TY+ETS DQG+E VFL+ + GL+ L+ E + SLR ++S +
Sbjct: 135 AFVFATSIGATYFETSTETDQGLEQVFLSTALGLVRLADEG-KSHSLRSFESSD 187
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 340 GVGKTSMVVRYIGKMFSHHIS--PTIGASFFTAKINVGENKVKLQL 383
GVGKT +V+RYI S PTI SFFT I + E K+KLQ+
Sbjct: 15 GVGKTRLVIRYIKNTLHRSESEVPTIAVSFFTCNIFLDEVKIKLQI 60
>gi|195384265|ref|XP_002050838.1| GJ19978 [Drosophila virilis]
gi|194145635|gb|EDW62031.1| GJ19978 [Drosophila virilis]
Length = 260
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 128/172 (74%), Gaps = 1/172 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +V++YI PTI SFFT I + + K+KLQ+WDTAGQERFR++APMY
Sbjct: 15 GVGKSRLVIKYIKNALHRTEEPTIAVSFFTCNIILDDVKIKLQIWDTAGQERFRAVAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNANAA+LVFD+TQY +F IK+W++EL RNV +P++L +VGNK D++S R V+R+EA
Sbjct: 75 YRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQSQRAVSRDEAH 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDN 287
++ SIG TY+ETS DQG+E VFL+ + GL+ L+ E + SLR ++S +
Sbjct: 135 LFAISIGATYFETSTETDQGLEQVFLSTALGLVRLADEG-KSHSLRSFESSD 185
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK+ +V++YI PTI SFFT I + + K+KLQ+
Sbjct: 15 GVGKSRLVIKYIKNALHRTEEPTIAVSFFTCNIILDDVKIKLQI 58
>gi|195455294|ref|XP_002074654.1| GK23050 [Drosophila willistoni]
gi|194170739|gb|EDW85640.1| GK23050 [Drosophila willistoni]
Length = 262
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 134/180 (74%), Gaps = 4/180 (2%)
Query: 116 GVGKTSMVVRYIGKMFSHHIS--PTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAP 173
GVGKT +V++Y+ + S PTI SFFT I + + K+KLQ+WDTAGQERFR++AP
Sbjct: 15 GVGKTRLVIKYMKNSLHRNESEVPTIAVSFFTCNIVLDQVKIKLQIWDTAGQERFRAVAP 74
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNANAA+LVFD+TQY +F IK+W++EL RNV +P++L +VGNK D+++ R V+R+E
Sbjct: 75 MYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSRDE 134
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDS-DNITSAN 292
A+ ++ SIG TY+ETS+ +QG+E VFL + GL+ L+ E + SLR ++S D++ N
Sbjct: 135 AYLFATSIGATYFETSSETEQGLEQVFLTTALGLVRLADEG-KSRSLRSFESCDSLAYTN 193
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 340 GVGKTSMVVRYIGKMFSHHIS--PTIGASFFTAKINVGENKVKLQL 383
GVGKT +V++Y+ + S PTI SFFT I + + K+KLQ+
Sbjct: 15 GVGKTRLVIKYMKNSLHRNESEVPTIAVSFFTCNIVLDQVKIKLQI 60
>gi|89258433|gb|ABD65440.1| Rab21-like [Suberites domuncula]
Length = 235
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 116/157 (73%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+V+R++ F+ +SPTIGASFFT + V ++KLQ+WDTAGQERFRSMAPMY
Sbjct: 24 GVGKTSLVLRHVSNTFTQSVSPTIGASFFTFSMTVTGYRIKLQLWDTAGQERFRSMAPMY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR ANAAL+V+DIT+ SF + WV+EL+ VD L LCVVGNK DL REV+RE+
Sbjct: 84 YRRANAALIVYDITREKSFEEAQEWVRELESKVDSNLSLCVVGNKCDLSGEREVSREQGL 143
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
++ IG + ETSA Q+ G+++ FL V++G+I L Q
Sbjct: 144 EFAHQIGAMFTETSAAQNSGVKEAFLKVAQGVISLHQ 180
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS+V+R++ F+ +SPTIGASFFT + V ++KLQL
Sbjct: 24 GVGKTSLVLRHVSNTFTQSVSPTIGASFFTFSMTVTGYRIKLQL 67
>gi|289742629|gb|ADD20062.1| GTPase Rab5/YPT51 [Glossina morsitans morsitans]
Length = 262
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 123/175 (70%), Gaps = 2/175 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V +YI PT+ SFFT K+ + + KV LQ+WDTAGQERF+++ PMY
Sbjct: 15 GVGKTRLVTKYIKSTLQSEFGPTVAPSFFTCKVLLDDYKVILQIWDTAGQERFKAVTPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNANAA+LVFD++Q+ +F IK W++EL NV P++L +VGNK DL S R V+REEA+
Sbjct: 75 YRNANAAILVFDLSQHRTFKEIKGWIQELHSNVQGPMILTLVGNKLDLLSERAVSREEAY 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYD-SDNIT 289
++ SIG +Y+E SA DQG+E VF N + GLI L E +LR +D SD+IT
Sbjct: 135 LFATSIGASYFEISAEMDQGLEQVFKNTAFGLIRLVNEG-KCRALRQFDSSDSIT 188
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKT +V +YI PT+ SFFT K+ + + KV LQ+
Sbjct: 15 GVGKTRLVTKYIKSTLQSEFGPTVAPSFFTCKVLLDDYKVILQI 58
>gi|427786685|gb|JAA58794.1| Putative rab subfamily protein of small gtpase [Rhipicephalus
pulchellus]
Length = 231
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 136/198 (68%), Gaps = 8/198 (4%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
LGVGKTS++ RY K F SPTIGASF T ++NVG+ KV++Q+WDTAGQERFR+MAP+
Sbjct: 20 LGVGKTSLITRYSQKKFIGTTSPTIGASFTTLRVNVGDAKVRIQLWDTAGQERFRAMAPL 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR ANAA++ +DIT SF A+K WV EL+RNV+E +VL +VGNK DL R V+RE A
Sbjct: 80 YYRKANAAIVAYDITSASSFEAMKQWVLELRRNVEEAIVLVLVGNKCDLMQHRAVDREMA 139
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPR 294
Y++ +G + E SAL ++GI+++F +++ +I S+E S DS++I +
Sbjct: 140 ERYARDVGAYFSECSALSNEGIDEMFRHLALRII-ESEEKAAASRPNHMDSNSIPT---- 194
Query: 295 GVVEITPLSSLDTPPLTE 312
+++ SLDT L++
Sbjct: 195 ---DLSLYGSLDTFTLSK 209
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
LGVGKTS++ RY K F SPTIGASF T ++NVG+ KV++QL
Sbjct: 20 LGVGKTSLITRYSQKKFIGTTSPTIGASFTTLRVNVGDAKVRIQL 64
>gi|427777835|gb|JAA54369.1| Putative rab subfamily protein of small gtpase [Rhipicephalus
pulchellus]
Length = 272
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 90/174 (51%), Positives = 125/174 (71%), Gaps = 1/174 (0%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
LGVGKTS++ RY K F SPTIGASF T ++NVG+ KV++Q+WDTAGQERFR+MAP+
Sbjct: 20 LGVGKTSLITRYSQKKFIGTTSPTIGASFTTLRVNVGDAKVRIQLWDTAGQERFRAMAPL 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR ANAA++ +DIT SF A+K WV EL+RNV+E +VL +VGNK DL R V+RE A
Sbjct: 80 YYRKANAAIVAYDITSASSFEAMKQWVLELRRNVEEAIVLVLVGNKCDLMQHRAVDREMA 139
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNI 288
Y++ +G + E SAL ++GI+++F +++ +I S+E S DS++I
Sbjct: 140 ERYARDVGAYFSECSALSNEGIDEMFRHLALRII-ESEEKAAASRPNHMDSNSI 192
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
LGVGKTS++ RY K F SPTIGASF T ++NVG+ KV++QL
Sbjct: 20 LGVGKTSLITRYSQKKFIGTTSPTIGASFTTLRVNVGDAKVRIQL 64
>gi|320168533|gb|EFW45432.1| GTP-binding protein rab11 [Capsaspora owczarzaki ATCC 30864]
Length = 243
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/155 (55%), Positives = 115/155 (74%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+V+RY+ ++ I+ TIGASF T K+ V +V++Q+WDTAGQERFRSMAPMY
Sbjct: 39 GVGKTSLVLRYVQGTYAADITSTIGASFMTRKMTVDRCQVRMQIWDTAGQERFRSMAPMY 98
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR ANAALLV+DIT +F IK+WVKEL+ NVD +VL +VGNK+D+ S R+V+ E A
Sbjct: 99 YRGANAALLVYDITDEQTFDDIKSWVKELQHNVDSDIVLVLVGNKSDMASQRKVSGETAA 158
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICL 270
Y++ I ++ETSA D GI D FL+ ++ +I L
Sbjct: 159 IYAEEINALFFETSAKADSGISDAFLHAAREMIKL 193
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS+V+RY+ ++ I+ TIGASF T K+ V +V++Q+
Sbjct: 39 GVGKTSLVLRYVQGTYAADITSTIGASFMTRKMTVDRCQVRMQI 82
>gi|443688646|gb|ELT91271.1| hypothetical protein CAPTEDRAFT_125280 [Capitella teleta]
Length = 161
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 80/142 (56%), Positives = 108/142 (76%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+VVRY+ F+ H+SPTIGASFFT K+ V ++++QVWDTAGQERFR+MAPMY
Sbjct: 15 GVGKTSVVVRYVSNTFNGHLSPTIGASFFTCKMMVDNYRLRIQVWDTAGQERFRAMAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR +NAA+LV+DIT SF +K+WV+EL++N D L +CV GNK DLE REV+ A
Sbjct: 75 YRKSNAAILVYDITSLESFDDMKSWVQELQKNTDGDLAMCVFGNKCDLEDQREVDNNLAL 134
Query: 236 HYSKSIGGTYYETSALQDQGIE 257
++ SIG +++ SAL +G++
Sbjct: 135 QFAASIGARHFQVSALSSEGLK 156
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS+VVRY+ F+ H+SPTIGASFFT K+ V ++++Q+
Sbjct: 15 GVGKTSVVVRYVSNTFNGHLSPTIGASFFTCKMMVDNYRLRIQV 58
>gi|346464805|gb|AEO32247.1| hypothetical protein [Amblyomma maculatum]
Length = 212
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 82/154 (53%), Positives = 116/154 (75%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
LGVGKTS++ RY K F SPTIGASF T ++NVG ++VK+Q+WDTAGQERFR+MAP+
Sbjct: 20 LGVGKTSIITRYSQKKFLGATSPTIGASFTTLRVNVGNDRVKIQLWDTAGQERFRAMAPL 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR ANAA+L +DIT S+ A+K W EL+RNV+E +VL +VGNK DL R V++ A
Sbjct: 80 YYRKANAAILAYDITSSSSYEAMKQWAIELRRNVEEAIVLVLVGNKCDLTQHRVVDKAVA 139
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++ IGG ++E SAL ++GI+++F +++ ++
Sbjct: 140 QKYARDIGGHFFECSALSNEGIDEMFCHLALQIV 173
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
LGVGKTS++ RY K F SPTIGASF T ++NVG ++VK+QL
Sbjct: 20 LGVGKTSIITRYSQKKFLGATSPTIGASFTTLRVNVGNDRVKIQL 64
>gi|340383289|ref|XP_003390150.1| PREDICTED: ras-related protein RabJ-like [Amphimedon queenslandica]
Length = 229
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 120/164 (73%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+VVR +G +FS ++SPTIGASFF+ ++ + ++KLQVWDTAGQERFRSMAPMY
Sbjct: 15 GVGKTSLVVRNMGGVFSENVSPTIGASFFSLQMILAGFRIKLQVWDTAGQERFRSMAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR ANAA++V+DIT +F K WV E++ VD P+ L +VGNKTDL +R+V+ +
Sbjct: 75 YRKANAAMIVYDITNEKTFDEAKLWVNEVQSKVDLPMALSIVGNKTDLSKNRQVSMNKGT 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSS 279
++ S+G + ETSA ++ G+++ FL V++G+ L +L S+
Sbjct: 135 TFAHSLGAMFTETSAAENIGVKEAFLKVAQGITELYNNNLLMST 178
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 36/44 (81%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS+VVR +G +FS ++SPTIGASFF+ ++ + ++KLQ+
Sbjct: 15 GVGKTSLVVRNMGGVFSENVSPTIGASFFSLQMILAGFRIKLQV 58
>gi|339250570|ref|XP_003374270.1| GTP-binding protein Ypt3 [Trichinella spiralis]
gi|316969453|gb|EFV53547.1| GTP-binding protein Ypt3 [Trichinella spiralis]
Length = 197
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/150 (52%), Positives = 110/150 (73%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+V+R+ G FS +S TIGASF ++ V + + +Q+WDTAGQERFR+MAPMY
Sbjct: 16 GVGKTSIVLRHSGSDFSTQVSSTIGASFCRTEMKVDDTDLLIQIWDTAGQERFRAMAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNA+AAL+V+D+T SF ++++W+ ELK N+D+P V+CVVGNK DL REV+ E+
Sbjct: 76 YRNADAALVVYDVTNRRSFESLRSWIDELKLNIDKPFVICVVGNKVDLAELREVSTEQGK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
+ S G ++ETSAL G+ED+F +K
Sbjct: 136 QLADSNGALFFETSALTCAGVEDMFKTTAK 165
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS+V+R+ G FS +S TIGASF ++ V + + +Q+
Sbjct: 16 GVGKTSIVLRHSGSDFSTQVSSTIGASFCRTEMKVDDTDLLIQI 59
>gi|380022460|ref|XP_003695063.1| PREDICTED: ras-related protein RabJ-like isoform 2 [Apis florea]
Length = 175
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 104/130 (80%)
Query: 159 VWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVG 218
VWDTAGQERFRSMAPMYYRNANAA+LVFD+TQY++FAA+K WV EL+RNV+E + L V+G
Sbjct: 12 VWDTAGQERFRSMAPMYYRNANAAMLVFDLTQYNTFAAMKRWVTELRRNVEEVMTLVVIG 71
Query: 219 NKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTS 278
NK+DL R+V+ EE Y+ IG +YYETS LQ++GI++VFL + GL+ LS ++
Sbjct: 72 NKSDLTKERQVDAEEGRVYATKIGASYYETSVLQNEGIKNVFLAIGNGLLKLSSTECDST 131
Query: 279 SLRVYDSDNI 288
S+RVY+S N+
Sbjct: 132 SIRVYESTNL 141
>gi|428182225|gb|EKX51086.1| hypothetical protein GUITHDRAFT_85102 [Guillardia theta CCMP2712]
Length = 215
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 113/165 (68%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY+ FS TI ASF + +IN+GEN L +WDTAGQERF ++ P+YY
Sbjct: 20 VGKTSLVLRYVNNTFSDKQQTTIQASFLSKRINIGENTCNLAIWDTAGQERFHALGPIYY 79
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R+A+ ALLV+D T SFA +K WVKEL++ V + +VLC+ GNK DL+ R+V + EA
Sbjct: 80 RDADGALLVYDTTDTESFAKVKNWVKELRKMVGQEIVLCIAGNKIDLDKERQVEKSEAEE 139
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLR 281
Y+ S+G +++TSA +GIE+ FL ++K +I QE+ S R
Sbjct: 140 YAASVGAYHFQTSAKLGKGIEETFLALAKKMIEQRQENDSRQSAR 184
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY+ FS TI ASF + +IN+GEN L +
Sbjct: 20 VGKTSLVLRYVNNTFSDKQQTTIQASFLSKRINIGENTCNLAI 62
>gi|73535747|pdb|1Z08|A Chain A, Gppnhp-Bound Rab21 Q53g Mutant Gtpase
gi|73535748|pdb|1Z08|B Chain B, Gppnhp-Bound Rab21 Q53g Mutant Gtpase
gi|73535749|pdb|1Z08|C Chain C, Gppnhp-Bound Rab21 Q53g Mutant Gtpase
gi|73535750|pdb|1Z08|D Chain D, Gppnhp-Bound Rab21 Q53g Mutant Gtpase
Length = 170
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 110/152 (72%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+GASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 17 VGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 76
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 77 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 136
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++S+G +Y TSA Q++GIE++FL++ K +I
Sbjct: 137 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMI 168
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+GASF T K+N+G +V L +
Sbjct: 17 VGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAI 59
>gi|321465957|gb|EFX76955.1| hypothetical protein DAPPUDRAFT_305964 [Daphnia pulex]
Length = 213
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 125/182 (68%), Gaps = 6/182 (3%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY+ F TI ASF T KIN+ +V L +WDTAGQERF ++ P+YY
Sbjct: 24 VGKTSLVLRYVEDKFHEKHFSTIQASFLTKKINLEGQRVTLAIWDTAGQERFHALGPIYY 83
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R+++AA+LV+DIT SF ++ WVKEL+R + + +VL +VGNK DL+ R V EEA
Sbjct: 84 RDSHAAILVYDITDQDSFVKVQNWVKELRRILGDKVVLAIVGNKIDLDKERNVPAEEALE 143
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITS-ANPRG 295
YSKS+G T+Y+TSA ++GIE++FL++++ L+ +++ +S S N+TS NP
Sbjct: 144 YSKSVGATHYQTSAKTNRGIEELFLDLTQQLLRMAESQNELNS-----SINLTSNRNPEV 198
Query: 296 VV 297
V+
Sbjct: 199 VI 200
>gi|395541042|ref|XP_003772457.1| PREDICTED: ras-related protein Rab-21-like, partial [Sarcophilus
harrisii]
Length = 223
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 30 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 89
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 90 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSVQEAEM 149
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
YS+S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 150 YSESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 185
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 30 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 72
>gi|148230174|ref|NP_001083402.1| RAB21, member RAS oncogene family [Xenopus laevis]
gi|38014530|gb|AAH60498.1| MGC68816 protein [Xenopus laevis]
Length = 221
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 28 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 87
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 88 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEKERHVSIQEAEE 147
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 148 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 183
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 28 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 70
>gi|355786315|gb|EHH66498.1| Ras-related protein Rab-21, partial [Macaca fascicularis]
Length = 205
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 10 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 69
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 70 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 129
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 130 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 165
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 10 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 52
>gi|62858707|ref|NP_001016319.1| RAB21, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89266851|emb|CAJ82566.1| RAB21, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|213624296|gb|AAI70902.1| RAB21, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|213624300|gb|AAI70908.1| RAB21, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 221
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 28 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 87
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 88 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEKERHVSVQEAET 147
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 148 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 183
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 28 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 70
>gi|301759615|ref|XP_002915660.1| PREDICTED: ras-related protein Rab-21-like [Ailuropoda melanoleuca]
Length = 220
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 25 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 84
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 85 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 144
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 145 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 180
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 25 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 67
>gi|296488008|tpg|DAA30121.1| TPA: ras-related protein Rab-21 [Bos taurus]
Length = 196
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 27 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 86
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 87 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEKERHVSIQEAES 146
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 147 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 182
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 27 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 69
>gi|291389571|ref|XP_002711381.1| PREDICTED: RAB21, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 221
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 26 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 85
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 86 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 145
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 146 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 181
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 26 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 68
>gi|344266375|ref|XP_003405256.1| PREDICTED: ras-related protein Rab-21-like [Loxodonta africana]
Length = 222
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 27 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 86
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 87 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLERERHVSIQEAES 146
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 147 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 182
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 27 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 69
>gi|115496760|ref|NP_001068785.1| ras-related protein Rab-21 [Bos taurus]
gi|122144675|sp|Q17R06.1|RAB21_BOVIN RecName: Full=Ras-related protein Rab-21; Flags: Precursor
gi|109658186|gb|AAI18089.1| RAB21, member RAS oncogene family [Bos taurus]
Length = 222
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 27 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 86
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 87 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEKERHVSIQEAES 146
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 147 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 182
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 27 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 69
>gi|410965116|ref|XP_003989098.1| PREDICTED: ras-related protein Rab-21 [Felis catus]
Length = 222
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 27 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 86
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 87 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 146
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 147 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 182
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 27 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 69
>gi|350584261|ref|XP_003481707.1| PREDICTED: ras-related protein Rab-21-like [Sus scrofa]
Length = 222
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 27 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 86
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 87 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 146
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 147 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 182
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 27 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 69
>gi|440905226|gb|ELR55633.1| Ras-related protein Rab-21, partial [Bos grunniens mutus]
Length = 214
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 19 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 78
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 79 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEKERHVSIQEAES 138
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 139 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 174
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 19 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 61
>gi|7661922|ref|NP_055814.1| ras-related protein Rab-21 [Homo sapiens]
gi|13633613|sp|Q9UL25.3|RAB21_HUMAN RecName: Full=Ras-related protein Rab-21; Flags: Precursor
gi|6002585|gb|AAF00048.1|AF091035_1 GTP-binding protein RAB21 [Homo sapiens]
gi|18255274|gb|AAH21901.1| RAB21, member RAS oncogene family [Homo sapiens]
gi|62203472|gb|AAH92475.1| RAB21, member RAS oncogene family [Homo sapiens]
gi|117646202|emb|CAL38568.1| hypothetical protein [synthetic construct]
gi|119617676|gb|EAW97270.1| RAB21, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119617677|gb|EAW97271.1| RAB21, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|168279117|dbj|BAG11438.1| Ras-related protein Rab-21 [synthetic construct]
Length = 225
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 30 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 89
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 90 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 149
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 150 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 185
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 30 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 72
>gi|402886848|ref|XP_003906828.1| PREDICTED: ras-related protein Rab-21 [Papio anubis]
Length = 223
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 28 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 87
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 88 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 147
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 148 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 183
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 28 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 70
>gi|332220901|ref|XP_003259597.1| PREDICTED: ras-related protein Rab-21 [Nomascus leucogenys]
Length = 225
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 30 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 89
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 90 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 149
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 150 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 185
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 30 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 72
>gi|296212384|ref|XP_002752808.1| PREDICTED: ras-related protein Rab-21 [Callithrix jacchus]
Length = 225
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 30 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 89
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 90 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 149
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 150 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 185
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 30 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 72
>gi|114645863|ref|XP_522469.2| PREDICTED: ras-related protein Rab-21 [Pan troglodytes]
gi|397526055|ref|XP_003832955.1| PREDICTED: ras-related protein Rab-21 [Pan paniscus]
Length = 224
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 29 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 88
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 89 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 148
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 149 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 184
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 29 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 71
>gi|449266530|gb|EMC77577.1| Ras-related protein Rab-21, partial [Columba livia]
Length = 201
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 7 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 66
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 67 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSVQEAET 126
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 127 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 162
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 7 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 49
>gi|281340633|gb|EFB16217.1| hypothetical protein PANDA_003669 [Ailuropoda melanoleuca]
Length = 221
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 26 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 85
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 86 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 145
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 146 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 181
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 26 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 68
>gi|240849355|ref|NP_001155346.1| ras-related protein Rab-21 [Ovis aries]
gi|238566822|gb|ACR46637.1| RAB21 [Ovis aries]
Length = 222
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 27 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 86
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 87 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEKERHVSIQEAES 146
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 147 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 182
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 27 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 69
>gi|2500067|sp|P55745.3|RAB21_CANFA RecName: Full=Ras-related protein Rab-21; Flags: Precursor
Length = 223
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 28 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 87
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 88 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 147
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 148 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 183
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 28 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 70
>gi|355714869|gb|AES05144.1| ras-related protein Rab-21 [Mustela putorius furo]
Length = 213
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 18 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 77
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 78 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 137
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 138 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 173
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 18 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 60
>gi|431892057|gb|ELK02504.1| Ras-related protein Rab-21 [Pteropus alecto]
Length = 227
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 32 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 92 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 151
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 152 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 187
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 32 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 74
>gi|224094073|ref|XP_002192267.1| PREDICTED: ras-related protein Rab-21 [Taeniopygia guttata]
Length = 220
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 26 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 85
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 86 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSVQEAEM 145
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 146 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 181
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 26 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 68
>gi|428182166|gb|EKX51028.1| hypothetical protein GUITHDRAFT_135041 [Guillardia theta CCMP2712]
Length = 210
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/153 (52%), Positives = 105/153 (68%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+I F H + TIGASF K+NVG ++ +Q+WDTAGQERFRSMAPMY
Sbjct: 17 GVGKTCLVHRFIEGKFVPHGASTIGASFMVKKMNVGGMRLTMQIWDTAGQERFRSMAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA+LV D T S+ +++WV+ELKRN + L + NK DL R V +EEA
Sbjct: 77 YRGAEAAILVLDCTNADSYEKVRSWVEELKRNASGEIFLALACNKCDLVEERRVAQEEAE 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+KSIG ETSA ++GI+++F V+KGL+
Sbjct: 137 AYAKSIGAVCMETSAKSNKGIDELFGAVAKGLV 169
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKT +V R+I F H + TIGASF K+NVG ++ +Q+
Sbjct: 17 GVGKTCLVHRFIEGKFVPHGASTIGASFMVKKMNVGGMRLTMQI 60
>gi|359320530|ref|XP_003431485.2| PREDICTED: RAB21, member RAS oncogene family, partial [Canis lupus
familiaris]
Length = 214
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 19 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 78
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 79 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 138
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 139 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 174
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 19 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 61
>gi|322780846|gb|EFZ10075.1| hypothetical protein SINV_12686 [Solenopsis invicta]
Length = 195
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 121/193 (62%), Gaps = 12/193 (6%)
Query: 388 KVSKIPVPTRNREG--ATTGR----ITEPDTMNNNNKKKNRVATTGRPVRSRGGPDRLAI 441
+V KIPVPTR REG T G+ I E + N+K+KNR P R+RG P +
Sbjct: 6 QVVKIPVPTRKREGLQQTGGKNSSSIGEEPSNKMNSKRKNRTNNNRSP-RARG-PQERCV 63
Query: 442 NPEGVYCNARFMQAITLHIGDKVTVYTVHGKQFEGYLKTFSKQFELVISMTHQVDPENPQ 501
EGVY NA FM A+T H+G+ V + T G FEG +TFS QF++V+ M H+V+
Sbjct: 64 AAEGVYNNAHFMHAVTSHVGNTVQIQTKSGSVFEGVFRTFSSQFDVVLEMAHRVESSGQI 123
Query: 502 CIDPNTVVDMKIFKLDDIVRIEAKNVDLEYAVRDTFATDTAISKFNGVIGERELEPWAED 561
+D +VV+ IFK D+V I AK+VDL+YA+RDTF TDTAISKFNG+IGE+ELEPW
Sbjct: 124 SVD--SVVEKLIFKPTDVVTISAKDVDLDYAIRDTFQTDTAISKFNGIIGEKELEPWDPP 181
Query: 562 MLGPGGDDDFELD 574
G D ELD
Sbjct: 182 TTMNGA--DLELD 192
>gi|118082329|ref|XP_001233648.1| PREDICTED: ras-related protein Rab-21 [Gallus gallus]
Length = 220
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 26 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 85
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 86 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSVQEAET 145
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 146 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 181
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 26 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 68
>gi|440791438|gb|ELR12676.1| Rasrelated protein Rab5, putative [Acanthamoeba castellanii str.
Neff]
Length = 218
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/153 (50%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+ +R++ FS +PT+GASF T + + + K+KL++WDTAGQERFRS+APMY
Sbjct: 29 GVGKTSLALRFVQDAFSSRTAPTVGASFLTKVLLISDCKIKLRIWDTAGQERFRSLAPMY 88
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++ FDIT+ SF ++ WVKEL+ N+ E ++L VVGNK DLE R+V++ A
Sbjct: 89 YRGACAAVIAFDITREESFKKMQDWVKELQINLSEEIILVVVGNKADLEKFRKVSKATAE 148
Query: 236 HYSKSIGG-TYYETSALQDQGIEDVFLNVSKGL 267
Y+++IG Y E SA GIE++F+N++ L
Sbjct: 149 DYARNIGALGYVEASAKTGDGIEEIFMNIAHKL 181
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS+ +R++ FS +PT+GASF T + + + K+KL++
Sbjct: 29 GVGKTSLALRFVQDAFSSRTAPTVGASFLTKVLLISDCKIKLRI 72
>gi|355564472|gb|EHH20972.1| Ras-related protein Rab-21 [Macaca mulatta]
Length = 223
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 28 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 87
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 88 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 147
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 148 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 183
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 28 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 70
>gi|109097798|ref|XP_001117520.1| PREDICTED: ras-related protein Rab-21-like [Macaca mulatta]
Length = 223
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 28 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 87
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 88 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 147
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 148 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 183
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 28 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 70
>gi|126339429|ref|XP_001370428.1| PREDICTED: ras-related protein Rab-21-like [Monodelphis domestica]
Length = 227
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 33 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 92
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 93 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSVQEAET 152
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 153 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 188
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 33 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 75
>gi|50510367|dbj|BAD32169.1| mKIAA0118 protein [Mus musculus]
Length = 253
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 59 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 118
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+D+T SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 119 RDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 178
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 179 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 214
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 59 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 101
>gi|195586066|ref|XP_002082799.1| GD25040 [Drosophila simulans]
gi|194194808|gb|EDX08384.1| GD25040 [Drosophila simulans]
Length = 259
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/129 (56%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Query: 159 VWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVG 218
+WDTAGQER+R+MAPMYYRNANAA+LVFD+TQY +F IK+W++EL RNV +P++L +VG
Sbjct: 58 IWDTAGQERYRAMAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVG 117
Query: 219 NKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTS 278
NK D+++ R V+REEAF ++ SIG TY+ETS DQG+E VF++ ++GL+ L+ E +
Sbjct: 118 NKMDMQAQRAVSREEAFVFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEG-KSP 176
Query: 279 SLRVYDSDN 287
SLR + S +
Sbjct: 177 SLRSFQSTD 185
>gi|73535743|pdb|1YZU|A Chain A, Gppnhp-Bound Rab21 Gtpase At 2.50 A Resolution
gi|73535744|pdb|1YZU|B Chain B, Gppnhp-Bound Rab21 Gtpase At 2.50 A Resolution
gi|73535774|pdb|1Z0I|A Chain A, Gdp-Bound Rab21 Gtpase
gi|146387038|pdb|2OT3|B Chain B, Crystal Structure Of Rabex-5 Vps9 Domain In Complex With
Nucleotide Free Rab21
Length = 170
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 109/152 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 17 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 76
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 77 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 136
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++S+G +Y TSA Q++GIE++FL++ K +I
Sbjct: 137 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMI 168
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 17 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 59
>gi|403272140|ref|XP_003927941.1| PREDICTED: ras-related protein Rab-21 [Saimiri boliviensis
boliviensis]
Length = 338
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 143 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 202
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 203 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 262
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 263 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 298
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 143 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 185
>gi|51948448|ref|NP_001004238.1| ras-related protein Rab-21 [Rattus norvegicus]
gi|81884468|sp|Q6AXT5.1|RAB21_RAT RecName: Full=Ras-related protein Rab-21; Flags: Precursor
gi|50927400|gb|AAH79323.1| RAB21, member RAS oncogene family [Rattus norvegicus]
gi|149066960|gb|EDM16693.1| RAB21, member RAS oncogene family [Rattus norvegicus]
Length = 223
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 28 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 87
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+D+T SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 88 RDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 147
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 148 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 183
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 28 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 70
>gi|33859751|ref|NP_077774.1| ras-related protein Rab-21 [Mus musculus]
gi|46577689|sp|P35282.4|RAB21_MOUSE RecName: Full=Ras-related protein Rab-21; AltName: Full=Rab-12;
Flags: Precursor
gi|32822759|gb|AAH55042.1| RAB21, member RAS oncogene family [Mus musculus]
gi|112292999|dbj|BAF02877.1| Rab21 [Mus musculus]
gi|148689817|gb|EDL21764.1| RAB21, member RAS oncogene family [Mus musculus]
Length = 222
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 28 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 87
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+D+T SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 88 RDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 147
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 148 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 183
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 28 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 70
>gi|417397373|gb|JAA45720.1| Putative gtpase [Desmodus rotundus]
Length = 221
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 26 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 85
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 86 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAEL 145
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 146 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 181
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 26 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 68
>gi|73535741|pdb|1YZT|A Chain A, Gppnhp-Bound Rab21 Gtpase At 2.05 A Resolution
gi|73535742|pdb|1YZT|B Chain B, Gppnhp-Bound Rab21 Gtpase At 2.05 A Resolution
Length = 184
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 109/152 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 31 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 90
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 91 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 150
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++S+G +Y TSA Q++GIE++FL++ K +I
Sbjct: 151 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMI 182
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 31 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 73
>gi|330822635|ref|XP_003291754.1| hypothetical protein DICPUDRAFT_156394 [Dictyostelium purpureum]
gi|325078046|gb|EGC31720.1| hypothetical protein DICPUDRAFT_156394 [Dictyostelium purpureum]
Length = 231
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 103/152 (67%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKT+ +RY +F +PTIGASF T IN+ NK+K +WDTAGQ+RFRS+ PMYY
Sbjct: 19 VGKTAAAIRYAEGVFPKRPTPTIGASFLTKTINIEGNKIKYLIWDTAGQDRFRSLTPMYY 78
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A A+LVFDIT SF +K WV+ELK N+ E +VL V GNK DL+ R+V RE A
Sbjct: 79 RGACVAILVFDITHQKSFDTVKDWVEELKSNIQEDIVLVVCGNKLDLQHKRQVKRETAKM 138
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+ I Y E SA +++G+E +FL +++ LI
Sbjct: 139 YADEIKALYVEISAKENEGVEQMFLEIARKLI 170
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVK 380
VGKT+ +RY +F +PTIGASF T IN+ NK+K
Sbjct: 19 VGKTAAAIRYAEGVFPKRPTPTIGASFLTKTINIEGNKIK 58
>gi|440791435|gb|ELR12673.1| Ras subfamily Rab protein [Acanthamoeba castellanii str. Neff]
Length = 256
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 99 SINSRVPNCFEANWFWLGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQ 158
S S EA LG GKTS+V RY+ + F + ++ T+GA F +I + + K+KLQ
Sbjct: 14 STYSNSETAIEAKVVLLGTGKTSLVQRYVNEDFDNTVTTTVGAGFANKRIVMDDVKIKLQ 73
Query: 159 VWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-----LV 213
+WDTAGQERFRSMAPMYYR A AA+LV+DIT SF A+K W+KEL + +
Sbjct: 74 IWDTAGQERFRSMAPMYYRGAVAAVLVYDITSVSSFHAVKGWIKELNEAAMQDGDLRRMA 133
Query: 214 LCVVGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+ + GNK DLE+ REV+ ++A Y+ SIG Y ETSAL ++G++D+F+ + + ++
Sbjct: 134 IGIAGNKKDLEADREVSTKDATAYADSIGAFYIETSALANEGLDDLFMGLCRRIL 188
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 323 SINSRVPNCFEANWFWLGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQ 382
S S EA LG GKTS+V RY+ + F + ++ T+GA F +I + + K+KLQ
Sbjct: 14 STYSNSETAIEAKVVLLGTGKTSLVQRYVNEDFDNTVTTTVGAGFANKRIVMDDVKIKLQ 73
Query: 383 L 383
+
Sbjct: 74 I 74
>gi|327272884|ref|XP_003221214.1| PREDICTED: ras-related protein Rab-21-like [Anolis carolinensis]
Length = 235
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 111/156 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 41 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 100
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DL+ R V+ +EA
Sbjct: 101 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLDKERHVSIQEAET 160
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 161 YAESVGARHYHTSAKQNKGIEELFLDLCKRMIETAQ 196
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY F+ T+ ASF T K+N+G +V L +
Sbjct: 41 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAI 83
>gi|405951631|gb|EKC19528.1| Ras-related protein Rab-21 [Crassostrea gigas]
Length = 208
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 108/152 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY+ F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 21 VGKTSLVLRYVENKFNDKHITTLQASFLTKKLNIGGKRVNLSIWDTAGQERFHALGPIYY 80
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+ GNK DLE R V+ +A
Sbjct: 81 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNDICLCIAGNKIDLEKERHVSVADAEA 140
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+ S+G ++ TSA ++GIE++FL++SKG+I
Sbjct: 141 YAASVGAKHFHTSAKLNKGIEEMFLDLSKGMI 172
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY+ F+ T+ ASF T K+N+G +V L +
Sbjct: 21 VGKTSLVLRYVENKFNDKHITTLQASFLTKKLNIGGKRVNLSI 63
>gi|198418761|ref|XP_002119635.1| PREDICTED: similar to Ras-related protein Rab-21 [Ciona
intestinalis]
Length = 218
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 109/157 (69%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 18 VGKTSLVLRYCEDKFNDKHITTLQASFLNKKLNIGGKRVNLSIWDTAGQERFHALGPIYY 77
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + + LC+ GNK DLE SR V+ +EA
Sbjct: 78 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGQDICLCIAGNKIDLEKSRHVSVQEAEE 137
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQE 273
Y+ S+G + TSA ++GI+DVFL +SK ++ +S E
Sbjct: 138 YAASVGAKHVHTSAKLNKGIDDVFLTLSKKMMQVSDE 174
>gi|193603506|ref|XP_001944237.1| PREDICTED: ras-related protein Rab-5B-like isoform 1 [Acyrthosiphon
pisum]
Length = 204
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 108/159 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S++ RYI F TIGASF AK+ + + ++ L+VWDTAGQERFRS+ PMY
Sbjct: 15 GVGKSSIITRYIKGDFKKECEATIGASFMYAKVTLRDYQITLKVWDTAGQERFRSLVPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRN++A ++FD++ SF +K W+ E+++N D P+V VVGNKTDL +R + EEA
Sbjct: 75 YRNSDAVAIIFDVSDRDSFNQVKNWINEVRKNTDTPVVYYVVGNKTDLIDTRVIMYEEAE 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQES 274
++ S+ Y+ETS + GI+D+F N+ + LI + + S
Sbjct: 135 EFANSVNARYWETSVYSNTGIQDLFTNIGRNLIEIVESS 173
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK+S++ RYI F TIGASF AK+ + + ++ L++
Sbjct: 15 GVGKSSIITRYIKGDFKKECEATIGASFMYAKVTLRDYQITLKV 58
>gi|47212281|emb|CAF89513.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 125/197 (63%), Gaps = 9/197 (4%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+ +V L +WDTAGQERF ++ P+YY
Sbjct: 23 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNITGKRVNLAIWDTAGQERFHALGPIYY 82
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+D+T SF +K WVKEL++ + + LC+VGNK DL+ R V+ EEA
Sbjct: 83 RDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNDICLCIVGNKIDLDKDRHVSVEEAES 142
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPRGV 296
Y++S+G +Y TSA ++GIE++FL++ K ++ +Q + RV + +A+ R
Sbjct: 143 YAESVGARHYHTSAKLNKGIEELFLDLCKRMMETAQ-----AEERVKGNGASQAASNRRG 197
Query: 297 VEITPLSSLDTPPLTEA 313
V+I D PP T A
Sbjct: 198 VQIVD----DEPPATPA 210
>gi|89258431|gb|ABD65439.1| Rab21 [Suberites domuncula]
Length = 222
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Query: 105 PNCFEANWFWLG---VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWD 161
P+ +A LG VGKTS+V+RY+ F+ T+ ASF +N+G +++L +WD
Sbjct: 9 PSTVKAKVVLLGEGAVGKTSIVLRYVENKFNDKHESTLQASFLQKTLNIGPRRIQLAIWD 68
Query: 162 TAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKT 221
TAGQERF ++ P+YYR+A A++V+DIT SF K W+KEL+R V + + +C+VGNK
Sbjct: 69 TAGQERFHALGPIYYRDAQGAVVVYDITDVDSFTKAKNWIKELRRIVGDNIAVCIVGNKI 128
Query: 222 DLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
DLE R V+ EA Y+ S+G T++ TSA Q++G++++FL++SK ++
Sbjct: 129 DLEKHRTVSHREAEDYASSVGATHFNTSAKQNKGVQELFLDLSKNIL 175
>gi|307197228|gb|EFN78547.1| Ras-related protein RabJ [Harpegnathos saltator]
Length = 1652
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 101/130 (77%), Gaps = 1/130 (0%)
Query: 157 LQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCV 216
+QVWDTAGQERFRSMAPMYYRNANAA+LVFD+T+Y +F+AIK+WV EL+RNV+E +VL V
Sbjct: 5 MQVWDTAGQERFRSMAPMYYRNANAAMLVFDLTEYSTFSAIKSWVTELQRNVEETMVLVV 64
Query: 217 VGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICL-SQESL 275
+GNK+DL R+VN EE Y+ IG TY+ETS L ++GIE VFL + GL+ L S
Sbjct: 65 IGNKSDLVQQRQVNDEEGREYATKIGATYHETSVLHNEGIETVFLAIGVGLLRLQSGNQD 124
Query: 276 HTSSLRVYDS 285
+SL++ DS
Sbjct: 125 METSLKIGDS 134
>gi|297469971|ref|XP_001249324.2| PREDICTED: ras-related protein Rab-21 [Bos taurus]
gi|297493177|ref|XP_002700179.1| PREDICTED: ras-related protein Rab-21 [Bos taurus]
gi|296470701|tpg|DAA12816.1| TPA: ras-related protein Rab-21-like [Bos taurus]
Length = 272
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 110/156 (70%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+ Y F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 77 VGKTSLVLCYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 136
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 137 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEKERHVSIQEAES 196
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 197 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 232
>gi|66817582|ref|XP_642644.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|75017424|sp|Q8MYF2.1|RABJ_DICDI RecName: Full=Ras-related protein RabJ
gi|60470709|gb|EAL68683.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 256
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 106/152 (69%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKT++ +RY+ +F ++ TIGASF T IN+ NK+K +WD+AGQ+RFRS+A +YY
Sbjct: 20 VGKTALSLRYVDGIFPKRLTSTIGASFLTRTINIEGNKIKYLIWDSAGQDRFRSLATLYY 79
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A A+LVFDITQ +F +K WV+ELK N+ E +++ + GNK DLE +R+V E A
Sbjct: 80 RGACVAILVFDITQQKTFDIVKGWVEELKANIQEEIIMVLCGNKIDLEQNRQVKSETAKL 139
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+ I Y ETSA +++G+E +FL + K LI
Sbjct: 140 YADEINAMYVETSAKENEGVEGMFLEIGKKLI 171
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVK 380
VGKT++ +RY+ +F ++ TIGASF T IN+ NK+K
Sbjct: 20 VGKTALSLRYVDGIFPKRLTSTIGASFLTRTINIEGNKIK 59
>gi|291234199|ref|XP_002737035.1| PREDICTED: RAB21, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 216
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 110/163 (67%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY+ F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 24 VGKTSVVLRYVENKFNEKHISTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 83
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+ GNK DLE R V +A
Sbjct: 84 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNDIALCIAGNKIDLEKERHVPVADAES 143
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSS 279
Y+ S+G ++ T+A ++GIE++FL++SK +I E H S+
Sbjct: 144 YAASVGAKHFHTTAKLNKGIEEMFLDLSKRMIERQSEDTHKST 186
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY+ F+ T+ ASF T K+N+G +V L +
Sbjct: 24 VGKTSVVLRYVENKFNEKHISTLQASFLTKKLNIGGKRVNLAI 66
>gi|328869307|gb|EGG17685.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 244
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 112/179 (62%), Gaps = 4/179 (2%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKT++ VRY +F T+GASF T +NV N++K Q+WDTAGQERFRS+A MYY
Sbjct: 48 VGKTAISVRYAEGIFPMRPLSTVGASFLTKNVNVDGNRIKFQIWDTAGQERFRSLASMYY 107
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A+ A+LVFD++ SF IK WV+ELK N+ E +V+ V GNK D E R V+R+ A
Sbjct: 108 RGASVAILVFDVSSQKSFDKIKEWVQELKINIQEDIVMIVCGNKIDKE--RVVDRDIAKT 165
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPRG 295
Y+ I YYETSA ++GI+ +FL ++K L+ LH R N NPRG
Sbjct: 166 YADDIKALYYETSAKMNEGIDVMFLEIAKRLLIKHHILLHNQ--RSQQHHNGVGVNPRG 222
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 302 LSSLDTPPLTEAETAKFVVGLSINSRVPNCFEANWFWLG---VGKTSMVVRYIGKMFSHH 358
L S +T T+ +T K + N E LG VGKT++ VRY +F
Sbjct: 7 LVSCETEKQTDRQTNKTDTHFCMERESIN-IECKIVLLGSTDVGKTAISVRYAEGIFPMR 65
Query: 359 ISPTIGASFFTAKINVGENKVKLQL 383
T+GASF T +NV N++K Q+
Sbjct: 66 PLSTVGASFLTKNVNVDGNRIKFQI 90
>gi|348521238|ref|XP_003448133.1| PREDICTED: ras-related protein Rab-21-like [Oreochromis niloticus]
Length = 216
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 124/197 (62%), Gaps = 9/197 (4%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+ +V L +WDTAGQERF ++ P+YY
Sbjct: 22 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNITGKRVNLAIWDTAGQERFHALGPIYY 81
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DL+ R V+ EEA
Sbjct: 82 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLDKDRHVSVEEAES 141
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPRGV 296
Y++S+G +Y TSA ++GIE++FL++ K ++ +Q + R+ + SA+ R
Sbjct: 142 YAESVGAKHYHTSAKLNKGIEELFLDLCKRMMETAQ-----AEERLKGNGASQSASSRRG 196
Query: 297 VEITPLSSLDTPPLTEA 313
V+I D P T A
Sbjct: 197 VQIVD----DEPQATPA 209
>gi|432103526|gb|ELK30630.1| Ras-related protein Rab-31 [Myotis davidii]
Length = 665
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 76 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLS-QESLHTSSLRV 282
Y++SIG ETSA IE++F +S+ + L QE+ +T ++++
Sbjct: 136 EYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPQENGNTGAIKL 183
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 51
>gi|443716621|gb|ELU08055.1| hypothetical protein CAPTEDRAFT_163376 [Capitella teleta]
Length = 216
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 115/163 (70%), Gaps = 2/163 (1%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+++R++ F+ T+ ASF K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 19 VGKTSLLLRFVENKFNDKHLTTLQASFLNKKMNIGGKRVNLAIWDTAGQERFHALGPIYY 78
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE+ R ++ ++A
Sbjct: 79 RDSNGAVLVYDITDEDSFLKVKNWVKELRKMLGNEISLCIVGNKVDLENDRHISVQDAES 138
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSS 279
Y+ S+G +Y TSA ++GIE++FL++SK + L Q + H+++
Sbjct: 139 YAASVGARHYHTSAKLNKGIEEMFLDLSKSM--LEQSNTHSAA 179
>gi|115495915|ref|NP_001070133.1| ras-related protein Rab-21 [Danio rerio]
gi|115313619|gb|AAI24523.1| Zgc:154045 [Danio rerio]
gi|182891700|gb|AAI65035.1| Zgc:154045 protein [Danio rerio]
Length = 216
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 109/156 (69%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+ +V L +WDTAGQERF ++ P+YY
Sbjct: 21 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNITGKRVNLAIWDTAGQERFHALGPIYY 80
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+D+T SF +K WVKEL++ + + LC+VGNK DLE R V+ EEA
Sbjct: 81 RDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSVEEAEG 140
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA ++GIE++FL++ K ++ +Q
Sbjct: 141 YAESVGAKHYHTSAKLNKGIEELFLDLCKRMMETAQ 176
>gi|432943838|ref|XP_004083295.1| PREDICTED: ras-related protein Rab-21-like [Oryzias latipes]
Length = 220
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 118/180 (65%), Gaps = 4/180 (2%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF T K+N+ +V L +WDTAGQERF ++ P+YY
Sbjct: 26 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNITGKRVNLAIWDTAGQERFHALGPIYY 85
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+D+T SF +K WVKEL++ + + LC+VGNK DL+ R V+ E+A
Sbjct: 86 RDSNGAVLVYDVTDEDSFQKVKNWVKELRKMLGNDICLCIVGNKIDLDKDRHVSVEDAES 145
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPRGV 296
Y++S+G +Y TSA ++GIE++FL++ K ++ E+ H + + ++A RGV
Sbjct: 146 YAESVGAKHYHTSAKLNKGIEELFLDLCKRMM----ETAHAEERAKGNGASQSAATRRGV 201
>gi|390360094|ref|XP_003729629.1| PREDICTED: ras-related protein Rab-21-like [Strongylocentrotus
purpuratus]
Length = 207
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 107/152 (70%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY+ F+ T+ ASF K+N+G +V L +WDTAGQERF ++ P+YY
Sbjct: 21 VGKTSLVLRYVENKFNDKHITTLQASFLNKKLNIGGKRVNLDIWDTAGQERFHALGPIYY 80
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K+WVKELK+ + + LC+ GNK DLE R V+ +A
Sbjct: 81 RDSNGAILVYDITDEDSFTKVKSWVKELKKMLGNDISLCIAGNKIDLEKQRNVSVADAEA 140
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+ S+G ++ TSA ++GIE++FL++SK ++
Sbjct: 141 YAASVGAKHFHTSAKLNKGIEEMFLDLSKRML 172
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+V+RY+ F+ T+ ASF K+N+G +V L +
Sbjct: 21 VGKTSLVLRYVENKFNDKHITTLQASFLNKKLNIGGKRVNLDI 63
>gi|324512193|gb|ADY45056.1| Ras-related protein Rab-21 [Ascaris suum]
Length = 239
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 109/154 (70%), Gaps = 2/154 (1%)
Query: 116 GVGKTSMVVRYIGKMFS-HHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
VGK+S+++RY+ F+ HIS TI ASF KI V N V L +WDTAGQE+F ++ P+
Sbjct: 46 AVGKSSLMLRYVENKFNPRHIS-TIQASFLCKKIVVDGNAVILNIWDTAGQEKFHALGPI 104
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR+++ ALL++DIT HSF +K+WVKEL+R + E +VL +VGNKTDLE +R V R+ A
Sbjct: 105 YYRDSHGALLIYDITDLHSFEKVKSWVKELRRILGESVVLLIVGNKTDLERNRNVERQTA 164
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+KS+G + ETSA + GI + F ++K +I
Sbjct: 165 LEYAKSVGADHCETSAKNNVGINEAFELLTKAMI 198
>gi|167523210|ref|XP_001745942.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775743|gb|EDQ89366.1| predicted protein [Monosiga brevicollis MX1]
Length = 194
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 103/164 (62%), Gaps = 3/164 (1%)
Query: 108 FEANWFWLG---VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAG 164
EA LG VGKTS+V+RY+ F +S TIGASFFT K+ V +VKLQ+WDTAG
Sbjct: 1 MEAKIVLLGAQSVGKTSLVLRYVDDAFEDAVSSTIGASFFTHKLTVDGCRVKLQLWDTAG 60
Query: 165 QERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLE 224
QERFRSMAPMYYR ++AAL+V+D+T S +K W+ EL+RN D V+C+ NK DL
Sbjct: 61 QERFRSMAPMYYRGSSAALIVYDVTTPKSLDEVKGWMAELQRNTDTSTVMCICANKVDLL 120
Query: 225 SSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
E+ Y+K ++ETSA GI + F+ V + LI
Sbjct: 121 KDDAHLVEKGRSYAKQTNAIFFETSAKTGAGINEAFMAVVRELI 164
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 332 FEANWFWLG---VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
EA LG VGKTS+V+RY+ F +S TIGASFFT K+ V +VKLQL
Sbjct: 1 MEAKIVLLGAQSVGKTSLVLRYVDDAFEDAVSSTIGASFFTHKLTVDGCRVKLQL 55
>gi|326911580|ref|XP_003202136.1| PREDICTED: ras-related protein Rab-21-like, partial [Meleagris
gallopavo]
Length = 189
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 105/150 (70%)
Query: 123 VVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYYRNANAA 182
V+RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YYR++N A
Sbjct: 1 VLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGA 60
Query: 183 LLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFHYSKSIG 242
+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA Y++S+G
Sbjct: 61 ILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSVQEAETYAESVG 120
Query: 243 GTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
+Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 121 AKHYHTSAKQNKGIEELFLDLCKRMIETAQ 150
>gi|196015793|ref|XP_002117752.1| hypothetical protein TRIADDRAFT_61818 [Trichoplax adhaerens]
gi|190579637|gb|EDV19728.1| hypothetical protein TRIADDRAFT_61818 [Trichoplax adhaerens]
Length = 209
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 110/162 (67%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ AS+ K+N+G ++ L +WDTAGQERF ++ P+YY
Sbjct: 20 VGKTSIVLRYCENKFNEKHLSTLQASYLEKKLNIGGKRINLAIWDTAGQERFHALGPIYY 79
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R ++ A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ A
Sbjct: 80 RESHGAILVYDITDEDSFMKVKKWVKELRKMLGNEICLCIVGNKIDLEKDRTVHVTRAED 139
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTS 278
Y++S+G ++ TSA ++GIE+VFLN++K ++ ++ +T+
Sbjct: 140 YAQSVGAVHFHTSAKMNKGIEEVFLNLTKRMLAAQDDNTNTA 181
>gi|320166151|gb|EFW43050.1| Rab21 [Capsaspora owczarzaki ATCC 30864]
Length = 202
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 113/165 (68%), Gaps = 2/165 (1%)
Query: 117 VGKTSMVVRYIGKMF-SHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY F HIS T+ ASF T ++N+G +V L +WDTAGQERF ++ P+Y
Sbjct: 17 VGKTSLVLRYCENRFVDKHIS-TLQASFLTKRLNIGGKRVNLNIWDTAGQERFHALGPIY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR++N A+LV+DIT SF +K WVKELK+ + + L + GNK+DLE R V+ E A
Sbjct: 76 YRDSNGAILVYDITDEDSFQKVKNWVKELKKMLGNDIALVIAGNKSDLEKHRTVSAEAAE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSL 280
Y+ S+G ++ TSA +GIE++FL++SK +I + + TS++
Sbjct: 136 QYAASVGARHFYTSAKLSKGIEELFLDLSKRMITEADKRGGTSTV 180
>gi|325192953|emb|CCA27337.1| ras family GTPase putative [Albugo laibachii Nc14]
Length = 308
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+++RYI ++ T+ AS+ ++ V +V+L +WDTAGQERF ++ P+YY
Sbjct: 22 VGKTSILLRYIKGEYTDQQVSTLQASYLDKRLMVDNTRVQLSIWDTAGQERFHALGPIYY 81
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R+A+ A+LV+DIT SF ++TWVKEL+R V + + + + GNK+DL +R+VN EEA +
Sbjct: 82 RDADGAVLVYDITDEESFRKVRTWVKELRRIVGDEIDILIAGNKSDLHRNRKVNEEEANN 141
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLH---TSSLRVYDSDNITSANP 293
Y+ S+G T++ TSA ++G+E+VF+++S+ ++ + TS+L D + + S P
Sbjct: 142 YAASVGATHFSTSAKLNRGLEEVFVDLSRRMLRRKSSATRRGKTSALIASDDEGVQSRMP 201
>gi|312066313|ref|XP_003136211.1| Ras family protein [Loa loa]
Length = 205
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 106/153 (69%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+++R+ G+ F +SPT+GASF ++ + + V+LQ+WDTAGQER+ SM PMY
Sbjct: 25 GVGKTSIILRHDGQGFYSKVSPTLGASFISSFLVLDGKSVELQIWDTAGQERYASMLPMY 84
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
RNA AA++V+DIT SF IK WV E+KR P+ L VVGNK DLE++R V E
Sbjct: 85 LRNAVAAVIVYDITDRESFQEIKKWVNEVKRGSTVPVSLFVVGNKLDLENARAVQCHEGA 144
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++ IG ++ETSA+ +GI V + V++ L+
Sbjct: 145 QYAEQIGAAFHETSAMNGEGIRKVIIAVAEHLL 177
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS+++R+ G+ F +SPT+GASF ++ + + V+LQ+
Sbjct: 25 GVGKTSIILRHDGQGFYSKVSPTLGASFISSFLVLDGKSVELQI 68
>gi|410923777|ref|XP_003975358.1| PREDICTED: ras-related protein Rab-31-like [Takifugu rubripes]
Length = 194
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 102/152 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGHELHKFLIWDTAGQERFHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV +EA
Sbjct: 75 YRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDIREVPMKEAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++SI + ETSA IE++F +SK +
Sbjct: 135 EFAESIAAIFIETSARNAVNIEELFQKISKQI 166
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCG 50
>gi|348668632|gb|EGZ08456.1| hypothetical protein PHYSODRAFT_565187 [Phytophthora sojae]
Length = 200
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 107/159 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V+R++ F + TIGASF + I V + +K Q+WDTAGQE++ S+APMY
Sbjct: 21 GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT+ S +K WVKELK+ + +V+ + GNK+DLE REV +A
Sbjct: 81 YRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKREVPASQAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQES 274
Y++ IG + ETSA +D + D+F+ +S+ L S ES
Sbjct: 141 AYAEEIGALFIETSAKEDTNVSDLFIQISQALPTASAES 179
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK+S+V+R++ F + TIGASF + I V + +K Q+
Sbjct: 21 GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQI 64
>gi|291190727|ref|NP_001167048.1| Ras-related protein Rab-31 [Salmo salar]
gi|223647850|gb|ACN10683.1| Ras-related protein Rab-31 [Salmo salar]
Length = 194
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 106/163 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGHELHKFLIWDTAGQERFHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV +EA
Sbjct: 75 YRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDIREVPMKEAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTS 278
+++SI + ETSA +E++F +SK + L L ++
Sbjct: 135 DFAESIAAIFMETSARNAVNVEELFQKISKQIPPLENPDLESN 177
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCG 50
>gi|47223044|emb|CAG07131.1| unnamed protein product [Tetraodon nigroviridis]
Length = 194
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 102/152 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV +EA
Sbjct: 75 YRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDIREVPTKEAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++SI + ETSA IE++F +SK +
Sbjct: 135 EFAESIAALFIETSARNAVNIEELFQKISKQI 166
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCG 50
>gi|354474122|ref|XP_003499280.1| PREDICTED: ras-related protein Rab-21-like [Cricetulus griseus]
Length = 289
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 106/158 (67%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G + +RY F+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+
Sbjct: 92 IGENQAHRXLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPI 151
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 152 YYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEA 211
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y+ S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 212 ESYADSVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 249
>gi|325188437|emb|CCA22973.1| Rab5 family GTPase putative [Albugo laibachii Nc14]
Length = 198
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 107/159 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V+R++ F + TIGASF + I V +K Q+WDTAGQE++ S+APMY
Sbjct: 20 GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIMVENTPIKYQIWDTAGQEKYHSLAPMY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT+ S A +K WVKELK+ E +V+ + GNK+DLE REV +A
Sbjct: 80 YRGAAAAIVVYDITRKQSLATLKNWVKELKQLGPENIVIAIAGNKSDLEDKREVPSAQAK 139
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQES 274
Y+ IG + ETSA +D + D+F+++SK L + E+
Sbjct: 140 AYADEIGALFIETSAKEDTNVSDLFISISKQLPTAAAET 178
>gi|432911409|ref|XP_004078665.1| PREDICTED: ras-related protein Rab-31-like [Oryzias latipes]
Length = 194
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 102/152 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV +EA
Sbjct: 75 YRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDIREVPMKEAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++SI + ETSA +E++F +SK +
Sbjct: 135 EFAESIAAIFIETSARNAVNVEELFQKISKQI 166
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCG 50
>gi|403265333|ref|XP_003924897.1| PREDICTED: ras-related protein Rab-31 [Saimiri boliviensis
boliviensis]
Length = 191
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 108 FEANWFWL--GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQ 165
++ W L GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQ
Sbjct: 2 WQGTWLTLDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQ 61
Query: 166 ERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLES 225
ERF S+APMYYR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL
Sbjct: 62 ERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSD 121
Query: 226 SREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
REV ++A Y++SIG ETSA IE++F +S+ +
Sbjct: 122 IREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 163
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 332 FEANWFWL--GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
++ W L GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 2 WQGTWLTLDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 47
>gi|426254027|ref|XP_004020688.1| PREDICTED: ras-related protein Rab-31 [Ovis aries]
Length = 252
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 105/165 (63%), Gaps = 4/165 (2%)
Query: 105 PNCFEANWFWL----GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVW 160
P C + L GVGK+S+V R++ F H+ISPTIGASF T + G K +W
Sbjct: 58 PLCLHGSVLVLFQDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIW 117
Query: 161 DTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNK 220
DTAGQERF S+APMYYR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK
Sbjct: 118 DTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNK 177
Query: 221 TDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
DL REV ++A Y++SIG ETSA IE++F +S+
Sbjct: 178 CDLSDIREVPLKDAKEYAESIGAVVVETSAKNAINIEELFQGISR 222
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 329 PNCFEANWFWL----GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
P C + L GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 58 PLCLHGSVLVLFQDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 108
>gi|307209881|gb|EFN86660.1| Ataxin-2-like protein [Harpegnathos saltator]
Length = 861
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 106/163 (65%), Gaps = 6/163 (3%)
Query: 416 NNKKKNRVATTGRPVRSRGGPDRLAINPEGVYCNARFMQAITLHIGDKVTVYTVHGKQFE 475
N+K+KNR + R R+RG P + EGVY NA FM AIT H+G+ V + T +G +E
Sbjct: 2 NSKRKNR-SNNNRSPRARG-PQERCVAAEGVYNNAHFMHAITSHVGNTVQIQTQNGSVYE 59
Query: 476 GYLKTFSKQFELVISMTHQVDPENPQCIDPNTVVDMKIFKLDDIVRIEAKNVDLEYAVRD 535
G +TFS QF++V+ M H+VD +D +VV+ IFK DIV + AKNVDL+YA+RD
Sbjct: 60 GIFRTFSSQFDVVLEMAHRVDSSGKISVD--SVVEKLIFKPHDIVTMSAKNVDLDYAIRD 117
Query: 536 TFATDTAISKFNGVIGERELEPWAEDMLGPGGDDDFELDQMCN 578
TF TDTAISKFNG+IGE+ELEPW D D ELD N
Sbjct: 118 TFQTDTAISKFNGLIGEKELEPW--DAPSTMNGADLELDGAAN 158
>gi|348521996|ref|XP_003448512.1| PREDICTED: ras-related protein Rab-31-like [Oreochromis niloticus]
Length = 194
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 102/152 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV +EA
Sbjct: 75 YRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDIREVPMKEAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++SI + ETSA +E++F +SK +
Sbjct: 135 EFAESIAAIFIETSARNAVNVEELFQKISKQI 166
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCG 50
>gi|345803388|ref|XP_850610.2| PREDICTED: ras-related protein Rab-31 [Canis lupus familiaris]
Length = 195
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 76 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 136 EYAESIGAVVVETSAKNAINIEELFQGISR 165
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 51
>gi|116004109|ref|NP_001070412.1| ras-related protein Rab-31 [Bos taurus]
gi|115305074|gb|AAI23832.1| RAB31, member RAS oncogene family [Bos taurus]
Length = 195
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 76 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 136 EYAESIGAVVVETSAKNAINIEELFQGISR 165
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 51
>gi|332225969|ref|XP_003262160.1| PREDICTED: uncharacterized protein LOC100594346 [Nomascus
leucogenys]
Length = 411
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 232 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 291
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 292 YRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 351
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 352 EYAESIGAIVVETSAKNAINIEELFQGISR 381
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 232 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 267
>gi|363730697|ref|XP_428301.3| PREDICTED: ras-related protein Rab-31 [Gallus gallus]
Length = 226
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 47 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 106
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 107 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPMKDAK 166
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 167 EYAESIGAIVVETSAKNAVNIEELFQGISQ 196
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 47 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 82
>gi|417396875|gb|JAA45471.1| Putative gtpase [Desmodus rotundus]
Length = 195
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 76 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 136 EYAESIGAIVVETSAKNAINIEELFQGISR 165
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 51
>gi|301116125|ref|XP_002905791.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
gi|262109091|gb|EEY67143.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
Length = 200
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 106/159 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V+R++ F + TIGASF + I V + +K Q+WDTAGQE++ S+APMY
Sbjct: 21 GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT+ S +K WVKELK+ + +V+ + GNK+DLE REV +A
Sbjct: 81 YRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKREVPASQAR 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQES 274
Y+ IG + ETSA +D + D+F+ +S+ L S ES
Sbjct: 141 AYAGEIGALFIETSAKEDTNVSDLFIQISQALPTASAES 179
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK+S+V+R++ F + TIGASF + I V + +K Q+
Sbjct: 21 GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQI 64
>gi|326917442|ref|XP_003205008.1| PREDICTED: ras-related protein Rab-31-like [Meleagris gallopavo]
Length = 236
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 102/152 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 57 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 116
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 117 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPMKDAK 176
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++SIG ETSA IE++F +S+ +
Sbjct: 177 EYAESIGAIVVETSAKNAVNIEELFQGISQQI 208
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 57 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 92
>gi|334325908|ref|XP_001370672.2| PREDICTED: ras-related protein Rab-31-like [Monodelphis domestica]
Length = 221
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 42 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 101
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 102 YRGSAAAVIVYDITKQDSFNTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPMKDAK 161
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 162 EYAESIGAVVVETSAKCAINIEELFQGISR 191
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 42 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 77
>gi|296473718|tpg|DAA15833.1| TPA: RAB31, member RAS oncogene family [Bos taurus]
Length = 182
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 76 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 136 EYAESIGAVVVETSAKNAINIEELFQGISR 165
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 51
>gi|440901603|gb|ELR52512.1| Ras-related protein Rab-31, partial [Bos grunniens mutus]
Length = 197
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 18 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 78 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 138 EYAESIGAVVVETSAKNAINIEELFQGISR 167
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 18 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 53
>gi|355714893|gb|AES05152.1| RAB31, member RAS oncoprotein family [Mustela putorius furo]
Length = 194
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 76 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 136 EYAESIGAVVVETSAKNAINIEELFQGISR 165
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 51
>gi|281339724|gb|EFB15308.1| hypothetical protein PANDA_010679 [Ailuropoda melanoleuca]
Length = 185
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 102/152 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 6 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 65
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 66 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 125
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++SIG ETSA IE++F +S+ +
Sbjct: 126 EYAESIGAVVVETSAKNAINIEELFQGISRQI 157
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 6 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 41
>gi|405974092|gb|EKC38762.1| Ras-related protein Rab-31 [Crassostrea gigas]
Length = 224
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 103/150 (68%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V+R++ F + TIGASF T ++ VG+ + Q+WDTAGQE++RS+APMY
Sbjct: 15 GVGKSSIVLRFVSDSFKGALESTIGASFMTKRLEVGDVSYQFQIWDTAGQEKYRSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A+AA++V+DIT+ ++ +K WV+ELKRN +V+ + GNK+DL REV +A
Sbjct: 75 YRGASAAIIVYDITREATYRTVKDWVRELKRNCTADMVIAIAGNKSDLNDLREVRARDAE 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG + ETSAL + +F + K
Sbjct: 135 EYAQSIGALFIETSALSAVNVPHLFTAIGK 164
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK+S+V+R++ F + TIGASF T ++ VG+ + Q+
Sbjct: 15 GVGKSSIVLRFVSDSFKGALESTIGASFMTKRLEVGDVSYQFQI 58
>gi|2500069|sp|Q13636.1|RAB31_HUMAN RecName: Full=Ras-related protein Rab-31; AltName: Full=Ras-related
protein Rab-22B
gi|10179679|gb|AAG13847.1|AF234995_1 small GTPase RAB22B [Homo sapiens]
gi|20379090|gb|AAM21105.1|AF498957_1 small GTP binding protein RAB31 [Homo sapiens]
gi|1388195|gb|AAB02832.1| low-Mr GTP-binding protein Rab31 [Homo sapiens]
gi|47115255|emb|CAG28587.1| RAB31 [Homo sapiens]
gi|54696916|gb|AAV38830.1| RAB31, member RAS oncogene family [Homo sapiens]
gi|54696918|gb|AAV38831.1| RAB31, member RAS oncogene family [Homo sapiens]
gi|60818832|gb|AAX36478.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61356180|gb|AAX41217.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61356190|gb|AAX41218.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61363035|gb|AAX42323.1| RAB31 member RAS oncogene family [synthetic construct]
gi|189054712|dbj|BAG37334.1| unnamed protein product [Homo sapiens]
Length = 194
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 102/152 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 75 YRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++SIG ETSA IE++F +S+ +
Sbjct: 135 EYAESIGAIVVETSAKNAINIEELFQGISRQI 166
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 50
>gi|61372802|gb|AAX43915.1| RAB31 member RAS oncogene family [synthetic construct]
Length = 196
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 76 YRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 136 EYAESIGAIVVETSAKNAINIEELFQGISR 165
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 51
>gi|338728025|ref|XP_001489577.2| PREDICTED: ras-related protein Rab-31-like [Equus caballus]
Length = 195
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 76 YRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 136 EYAESIGAIVVETSAKNAINIEELFQGISR 165
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 51
>gi|54696912|gb|AAV38828.1| RAB31, member RAS oncogene family [synthetic construct]
gi|54696914|gb|AAV38829.1| RAB31, member RAS oncogene family [synthetic construct]
gi|60830380|gb|AAX36926.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61366036|gb|AAX42804.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61366043|gb|AAX42805.1| RAB31 member RAS oncogene family [synthetic construct]
Length = 195
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 102/152 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 75 YRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++SIG ETSA IE++F +S+ +
Sbjct: 135 EYAESIGAIVVETSAKNAINIEELFQGISRQI 166
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 50
>gi|1457954|gb|AAC50773.1| Rab22b [Homo sapiens]
Length = 194
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 102/152 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 75 YRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++SIG ETSA IE++F +S+ +
Sbjct: 135 EYAESIGAIVVETSAKNAINIEELFQGISRQI 166
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 50
>gi|395511731|ref|XP_003760106.1| PREDICTED: ras-related protein Rab-31 [Sarcophilus harrisii]
Length = 195
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 76 YRGSAAAVIVYDITKQDSFNTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPMKDAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 136 EYAESIGAVVVETSAKCAINIEELFQGISR 165
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 51
>gi|326432232|gb|EGD77802.1| rab family small GTPase [Salpingoeca sp. ATCC 50818]
Length = 197
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 110/152 (72%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY + F+ + T+ ASF KIN+ + +V+L +WDTAGQE+F ++ P+YY
Sbjct: 15 VGKTSIVLRYCQQTFNENHVSTLQASFLKKKINLNQQRVELAIWDTAGQEKFHALGPIYY 74
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
RN++ A+LV+DIT SF +K WV+ELK+ + + L + GNK+DLE R V++ EA
Sbjct: 75 RNSHGAVLVYDITDQDSFQKVKNWVRELKKMLGSNIALTICGNKSDLERQRTVDQAEAEA 134
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+ S+G +++TSA ++GI+++FL+++K L+
Sbjct: 135 YAASVGAKHFQTSARLNRGIDEMFLDLAKRLV 166
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQLRTGLKVSKI----PVPT 396
VGKTS+V+RY + F+ + T+ ASF KIN+ + +V+L + K P+
Sbjct: 15 VGKTSIVLRYCQQTFNENHVSTLQASFLKKKINLNQQRVELAIWDTAGQEKFHALGPIYY 74
Query: 397 RNREGAT-TGRITEPDTMN 414
RN GA IT+ D+
Sbjct: 75 RNSHGAVLVYDITDQDSFQ 93
>gi|62898742|dbj|BAD97225.1| RAB31, member RAS oncogene family variant [Homo sapiens]
Length = 195
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 102/152 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 76 YRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++SIG ETSA IE++F +S+ +
Sbjct: 136 EYAESIGAIVVETSAKNAINIEELFQGISRQI 167
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 51
>gi|33589861|ref|NP_006859.2| ras-related protein Rab-31 [Homo sapiens]
gi|332849489|ref|XP_523865.3| PREDICTED: uncharacterized protein LOC468476 isoform 2 [Pan
troglodytes]
gi|426385456|ref|XP_004059230.1| PREDICTED: ras-related protein Rab-31 [Gorilla gorilla gorilla]
gi|9963781|gb|AAG09690.1|AF183421_1 small GTP-binding protein rab22b [Homo sapiens]
gi|12654623|gb|AAH01148.1| RAB31, member RAS oncogene family [Homo sapiens]
gi|60655513|gb|AAX32320.1| RAB31 member RAS oncogene family [synthetic construct]
gi|119622001|gb|EAX01596.1| RAB31, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|123984139|gb|ABM83504.1| RAB31, member RAS oncogene family [synthetic construct]
gi|123998237|gb|ABM86720.1| RAB31, member RAS oncogene family [synthetic construct]
gi|410217198|gb|JAA05818.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410266338|gb|JAA21135.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410308006|gb|JAA32603.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410308008|gb|JAA32604.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410308010|gb|JAA32605.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410352351|gb|JAA42779.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410352353|gb|JAA42780.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410352355|gb|JAA42781.1| RAB31, member RAS oncogene family [Pan troglodytes]
Length = 195
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 102/152 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 76 YRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++SIG ETSA IE++F +S+ +
Sbjct: 136 EYAESIGAIVVETSAKNAINIEELFQGISRQI 167
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 51
>gi|410977346|ref|XP_003995067.1| PREDICTED: ras-related protein Rab-31 [Felis catus]
Length = 217
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 38 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 97
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 98 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 157
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 158 EYAESIGAVVVETSAKNAINIEELFQGISR 187
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 38 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 73
>gi|354492620|ref|XP_003508445.1| PREDICTED: ras-related protein Rab-31-like [Cricetulus griseus]
Length = 203
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 24 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 84 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 143
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 144 EYAESIGAIVVETSAKNAINIEELFQGISR 173
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 24 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 59
>gi|60654153|gb|AAX29769.1| RAB31 member RAS oncogene family [synthetic construct]
Length = 195
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 102/152 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 75 YRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++SIG ETSA IE++F +S+ +
Sbjct: 135 EYAESIGAIVVETSAKNAINIEELFQGISRQI 166
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 50
>gi|388454460|ref|NP_001253365.1| ras-related protein Rab-31 [Macaca mulatta]
gi|402902630|ref|XP_003914202.1| PREDICTED: ras-related protein Rab-31-like [Papio anubis]
gi|380809112|gb|AFE76431.1| ras-related protein Rab-31 [Macaca mulatta]
gi|384945010|gb|AFI36110.1| ras-related protein Rab-31 [Macaca mulatta]
Length = 194
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 76 YRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 136 EYAESIGAIVVETSAKNAINIEELFQGISR 165
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 51
>gi|225579124|ref|NP_598446.2| ras-related protein Rab-31 [Mus musculus]
gi|74140181|dbj|BAE33804.1| unnamed protein product [Mus musculus]
gi|74186712|dbj|BAE34811.1| unnamed protein product [Mus musculus]
gi|112293003|dbj|BAF02879.1| Rab22B [Mus musculus]
Length = 195
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 76 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 136 EYAESIGAIVVETSAKNAINIEELFQGISR 165
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 51
>gi|449677953|ref|XP_002167019.2| PREDICTED: ras-related protein Rab-21-like [Hydra magnipapillata]
Length = 217
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 104/152 (68%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+++RY F+ T+ A+F ++N+ ++ L +WDTAGQERF ++ P+YY
Sbjct: 20 VGKTSILLRYCQDKFNDKHLTTLQAAFLNRRLNIDSKRINLSIWDTAGQERFHALGPIYY 79
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++ A+LV+DIT SF +K WVKEL++ + E + LC+ GNK D+E R V EA
Sbjct: 80 RDSQGAILVYDITDEDSFQKVKNWVKELRKMLGEEICLCIAGNKIDMEKERHVLVSEAEE 139
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+KS+G +Y TSA ++GIE++FL+++K ++
Sbjct: 140 YAKSVGAKHYHTSAKLNRGIEEMFLDLTKSMV 171
>gi|62901101|sp|Q921E2.1|RAB31_MOUSE RecName: Full=Ras-related protein Rab-31
gi|15341792|gb|AAH13063.1| RAB31, member RAS oncogene family [Mus musculus]
Length = 194
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 75 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 135 EYAESIGAIVVETSAKNAINIEELFQGISR 164
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 50
>gi|397475954|ref|XP_003809378.1| PREDICTED: ras-related protein Rab-31 [Pan paniscus]
Length = 191
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 104/158 (65%), Gaps = 4/158 (2%)
Query: 114 WL----GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFR 169
WL GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF
Sbjct: 6 WLTPDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFH 65
Query: 170 SMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREV 229
S+APMYYR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV
Sbjct: 66 SLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREV 125
Query: 230 NREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
++A Y++SIG ETSA IE++F +S+ +
Sbjct: 126 PLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 163
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 338 WL----GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
WL GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 6 WLTPDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 47
>gi|281200509|gb|EFA74727.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 204
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 106/168 (63%), Gaps = 14/168 (8%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
L VGKT++ +RY +F T+GASF T I V +++K Q+WDTAGQ+RFRS+APM
Sbjct: 12 LNVGKTAIAIRYSEGVFPTRPLSTVGASFLTKNIYVDNSRIKFQIWDTAGQDRFRSLAPM 71
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDE--------------PLVLCVVGNK 220
YYR A A+LV+D+T SF +K WV+ELK N+ E +VL V GNK
Sbjct: 72 YYRGACVAVLVYDVTVPLSFEKVKLWVEELKTNIQEEIRCMLLTVIHLRYSIVLIVCGNK 131
Query: 221 TDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
DL R+V+RE A Y+ IG Y+ETSA ++GI+ +FL ++K L+
Sbjct: 132 IDLVEKRQVSREIALQYAGEIGAVYFETSAKNNEGIDQMFLEIAKKLL 179
>gi|301772696|ref|XP_002921772.1| PREDICTED: ras-related protein Rab-31-like [Ailuropoda melanoleuca]
Length = 197
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 18 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 78 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 138 EYAESIGAVVVETSAKNAINIEELFQGISR 167
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 18 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 53
>gi|125951222|ref|XP_697248.2| PREDICTED: ras-related protein Rab-31-like [Danio rerio]
Length = 194
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 102/152 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPSGNELHKFLIWDTAGQERFHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV +EA
Sbjct: 75 YRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDIREVPTKEAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++SI + ETSA IE++F +S+ +
Sbjct: 135 EFAESIAAIFMETSARNAVNIEELFQKISRQI 166
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPSG 50
>gi|348557346|ref|XP_003464480.1| PREDICTED: ras-related protein Rab-31-like [Cavia porcellus]
Length = 201
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 21 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 81 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 141 DYAESIGAIVVETSAKNAINIEELFQGISR 170
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 21 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 56
>gi|390473801|ref|XP_002757097.2| PREDICTED: ras-related protein Rab-31-like [Callithrix jacchus]
Length = 200
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 21 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 81 YRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 141 EYAESIGAIVVETSAKNAINIEELFQGISR 170
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 21 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 56
>gi|431896339|gb|ELK05755.1| Ras-related protein Rab-31 [Pteropus alecto]
Length = 215
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 36 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 95
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 96 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 155
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 156 EYAESIGAIVVETSAKNAINIEELFQGISR 185
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 36 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 71
>gi|77404176|ref|NP_659562.2| ras-related protein Rab-31 [Rattus norvegicus]
gi|49119014|gb|AAH72698.1| RAB31, member RAS oncogene family [Rattus norvegicus]
Length = 195
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 76 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 136 EYAESIGALVVETSAKNAINIEELFQGISR 165
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 51
>gi|62900806|sp|Q6GQP4.2|RAB31_RAT RecName: Full=Ras-related protein Rab-31; AltName: Full=GTP-binding
protein Rab0
Length = 194
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 75 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 135 EYAESIGALVVETSAKNAINIEELFQGISR 164
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 50
>gi|402588525|gb|EJW82458.1| Ras family protein [Wuchereria bancrofti]
Length = 213
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 106/153 (69%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+++R+ G+ F +SPT+GASF ++ + + V+LQ+WDTAGQER+ SM PMY
Sbjct: 25 GVGKTSIILRHDGQGFYSKVSPTLGASFISSFLLLDGKSVELQIWDTAGQERYASMLPMY 84
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
RNA AA++V+D+T SF IK WV E++R P+ L VVGNK DLES+R V E
Sbjct: 85 LRNAVAAVIVYDVTDRDSFFEIKKWVNEVERGSTVPVSLFVVGNKLDLESARVVQYREGA 144
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++ IG ++ETSA+ +GI V + V++ L+
Sbjct: 145 QYAEQIGAAFHETSAMNGEGIRKVIIAVAEHLL 177
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS+++R+ G+ F +SPT+GASF ++ + + V+LQ+
Sbjct: 25 GVGKTSIILRHDGQGFYSKVSPTLGASFISSFLLLDGKSVELQI 68
>gi|327281988|ref|XP_003225727.1| PREDICTED: ras-related protein Rab-31-like [Anolis carolinensis]
Length = 196
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 102/152 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 17 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 77 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPTKDAK 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+++IG ETSA IE++F +S+ +
Sbjct: 137 EYAETIGAIVVETSAKNAINIEELFQGISRQI 168
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 17 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 52
>gi|88192998|pdb|2FG5|A Chain A, Crystal Structure Of Human Rab31 In Complex With A Gtp
Analogue
Length = 192
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 33 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 92
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 93 YRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 152
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 153 EYAESIGAIVVETSAKNAINIEELFQGISR 182
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 33 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 68
>gi|402594577|gb|EJW88503.1| Rab21 protein [Wuchereria bancrofti]
Length = 223
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 122/196 (62%), Gaps = 9/196 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+++RY+ FS T+ ASF + K++V V L +WDTAGQE+F ++ P+Y
Sbjct: 26 AVGKTSLMLRYVENKFSPQHVSTLQASFLSKKLHVDGQAVVLNIWDTAGQEKFHALGPIY 85
Query: 176 YRNANAALLVFDITQYHSF--AAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
YR+++ ALL++D+T +SF A +K WVKELKR + + + L ++GNK DLE +R V+ +E
Sbjct: 86 YRDSHGALLIYDVTDTNSFEKAPVKMWVKELKRMLGDDVYLVIIGNKVDLERNRNVDTDE 145
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
A Y+KSIG ++ETSA + G+ VF + KGL+ +Q S + +TS++
Sbjct: 146 AIGYAKSIGAEHFETSAKDNIGVTQVFDYLVKGLVERAQHS-------KFQGTAVTSSSH 198
Query: 294 RGVVEITPLSSLDTPP 309
G L +D PP
Sbjct: 199 YGASRRNDLLIIDDPP 214
>gi|154147600|ref|NP_001093711.1| RAB31, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134023906|gb|AAI35942.1| rab31 protein [Xenopus (Silurana) tropicalis]
Length = 194
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 102/150 (68%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 15 GVGKSSIVSRFVQDHFDHNISPTIGASFMTKTVPSGNELHKFLIWDTAGQERFHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F +K WVKELK + E +V+ + GNK DL +REV ++A
Sbjct: 75 YRGSAAAVIVYDITKQDTFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDTREVTMKDAR 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA +E++F +S+
Sbjct: 135 EYAESIGAIVVETSAKNAINVEELFQGISR 164
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 15 GVGKSSIVSRFVQDHFDHNISPTIGASFMTKTVPSG 50
>gi|198422149|ref|XP_002119443.1| PREDICTED: similar to low-Mr GTP-binding protein Rab31, putative
[Ciona intestinalis]
Length = 193
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 105/145 (72%)
Query: 124 VRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYYRNANAAL 183
+RY K+F +PTIGA++F A VG+ K+KL++WDTAGQERF+SM PMYYRN+ AAL
Sbjct: 1 MRYSRKIFVETSTPTIGAAYFEAIEEVGDQKLKLKIWDTAGQERFKSMIPMYYRNSKAAL 60
Query: 184 LVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFHYSKSIGG 243
+VFDIT SF A + W EL +++++ L+L ++GNK+DL SR+V + EA Y++ IGG
Sbjct: 61 IVFDITDSDSFVAAQKWATELHQHIEDKLILFLIGNKSDLGRSRKVKQSEANAYAEMIGG 120
Query: 244 TYYETSALQDQGIEDVFLNVSKGLI 268
+ E SA ++GI ++FL++ L+
Sbjct: 121 HFREVSAYSNEGISEMFLDLCVKLL 145
>gi|395857349|ref|XP_003801059.1| PREDICTED: ras-related protein Rab-31 [Otolemur garnettii]
Length = 207
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 28 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 87
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 88 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 147
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 148 EYAESIGALVVETSAKNAINIEELFQGISR 177
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 28 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 63
>gi|30580479|sp|Q8WQ53.1|RAB21_GEOCY RecName: Full=Ras-related protein Rab-21
gi|18073931|emb|CAC85935.1| Ras-realted small GTPase [Geodia cydonium]
Length = 229
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 107/153 (69%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY F+ T+ ASF ++N+G +++L +WDTAGQER+ ++ P+Y
Sbjct: 26 AVGKTSLVLRYSENKFNDKHEQTLQASFVEKRLNIGGKRIQLAIWDTAGQERYHALGPIY 85
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR++ A++V+DIT SF + W+KELKR + + + LC+VGNK DL+ R V+ ++A
Sbjct: 86 YRDSQGAIIVYDITDEDSFHKARNWIKELKRMLGDKVTLCIVGNKIDLDRQRTVSEKDAL 145
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++S+G +Y TSA Q +G+ ++FL+++K ++
Sbjct: 146 EYAESVGAKHYYTSAKQSKGVAELFLDLAKRIL 178
>gi|326435249|gb|EGD80819.1| hypothetical protein PTSG_01405 [Salpingoeca sp. ATCC 50818]
Length = 195
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 102/157 (64%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+VVRY+ FS +S T+GASFF KIN G++ +KLQ+WDTAG+ERF SM PMYY
Sbjct: 16 VGKTSLVVRYVNNDFSEKVSSTVGASFFKHKINAGKHTIKLQIWDTAGEERFHSMLPMYY 75
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A+AALLV+D+T S W+ EL+ N E L+LC+V NK DL EE
Sbjct: 76 RGASAALLVYDVTNPKSLDDALDWINELRDNCSEHLILCLVANKMDLVEEGCDAIEEGRR 135
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQE 273
++ +++TSA GI + F++++K LI L+ E
Sbjct: 136 LAQENDALFHQTSAKTGSGISETFVDIAKELIGLTGE 172
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGKTS+VVRY+ FS +S T+GASFF KIN G++ +KLQ+
Sbjct: 16 VGKTSLVVRYVNNDFSEKVSSTVGASFFKHKINAGKHTIKLQI 58
>gi|225710862|gb|ACO11277.1| Ras-related protein Rab-21 [Caligus rogercresseyi]
Length = 217
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 104/152 (68%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS V+RY+ F+ T+ ASF ++NV +V L +WDTAGQERF ++ P+YY
Sbjct: 25 VGKTSCVLRYVDDQFNDRHITTLQASFLNKRLNVRGKRVNLSIWDTAGQERFHALGPIYY 84
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R+AN A+LV+DI+ SF +K W+KEL++ + +VL + GNK DLE SR+V A
Sbjct: 85 RDANGAILVYDISDLDSFRKVKVWIKELRKMLGNKIVLLIAGNKIDLEDSRQVETGTAEE 144
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+KS+G T++ TSA + GI+++FL +++ +I
Sbjct: 145 YAKSVGATHFHTSAKDNTGIDELFLELTRQMI 176
>gi|170592619|ref|XP_001901062.1| Ras family protein [Brugia malayi]
gi|158591129|gb|EDP29742.1| Ras family protein [Brugia malayi]
Length = 212
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 105/153 (68%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+++R+ G+ F +SPT+GASF ++ + + V+LQ+WDTAGQER+ SM PMY
Sbjct: 24 GVGKTSIILRHDGQGFYSKVSPTLGASFISSFLFLDGKNVELQIWDTAGQERYASMLPMY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
RNA AA++V+D+T SF IK WV E++R P+ L VVGNK DLES+R V E
Sbjct: 84 LRNAVAAVIVYDVTDRDSFLEIKKWVNEVERGSTVPVSLFVVGNKLDLESARVVQYHEGA 143
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++ IG ++ETSA+ +GI V V++ L+
Sbjct: 144 QYAEQIGAAFHETSAMNGEGIRKVITAVAEHLL 176
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS+++R+ G+ F +SPT+GASF ++ + + V+LQ+
Sbjct: 24 GVGKTSIILRHDGQGFYSKVSPTLGASFISSFLFLDGKNVELQI 67
>gi|389751301|gb|EIM92374.1| GTP-binding protein RAB5 [Stereum hirsutum FP-91666 SS1]
Length = 208
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T +N+ + VK ++WDTAGQER++S+APMY
Sbjct: 17 VGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVNLDDGMTVKFEIWDTAGQERYKSLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNAN A++V+DITQ S + W++EL+R D +V+ + GNK+DL + R+V +EEA
Sbjct: 77 YRNANCAVVVYDITQSASLEKARNWIRELQRQADPSIVIALCGNKSDLAARRQVTQEEAQ 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA +G+ D+F ++K L
Sbjct: 137 KYAEEEGLMWAETSAKSGEGVSDIFTAIAKKL 168
>gi|335772958|gb|AEH58231.1| Ras-related protein Rab-21-like protein [Equus caballus]
Length = 186
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/144 (48%), Positives = 103/144 (71%), Gaps = 1/144 (0%)
Query: 129 KMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDI 188
K HI+ T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YYR++N A+LV+DI
Sbjct: 4 KFNDKHIT-TLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDI 62
Query: 189 TQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFHYSKSIGGTYYET 248
T SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA Y++S+G +Y T
Sbjct: 63 TDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHT 122
Query: 249 SALQDQGIEDVFLNVSKGLICLSQ 272
SA Q++GIE++FL++ K +I +Q
Sbjct: 123 SAKQNKGIEELFLDLCKRMIETAQ 146
>gi|119622000|gb|EAX01595.1| RAB31, member RAS oncogene family, isoform CRA_a [Homo sapiens]
Length = 172
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 76 YRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 136 EYAESIGAIVVETSAKNAINIEELFQGISE 165
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 51
>gi|26341846|dbj|BAC34585.1| unnamed protein product [Mus musculus]
Length = 195
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPWGNELHKFLIWDTAGQERFHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL REV ++A
Sbjct: 76 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 136 EYAESIGAIVVETSAKNAINIEELFQGISR 165
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPWG 51
>gi|7689359|gb|AAF67746.1|AF254800_1 GTP-binding protein Rab0 [Rattus norvegicus]
Length = 194
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 100/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK E +V+ + GNK DL REV ++A
Sbjct: 75 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEYGPENIVMAIAGNKCDLSDIREVPLKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 135 EYAESIGALVVETSAKNAINIEELFQGISR 164
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 50
>gi|391331399|ref|XP_003740134.1| PREDICTED: ras-related protein Rab-21-like [Metaseiulus
occidentalis]
Length = 211
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 105/152 (69%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+++RY+ F+ + T+ AS+ T + +G +V L +WDTAGQE F ++ P+YY
Sbjct: 17 VGKTSLILRYVHDKFNDRLDRTVNASYLTKTVALGMKRVDLAIWDTAGQEMFHALGPLYY 76
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++ A+LV+DIT SF +K WVKELK+ + +VL V+GNK+DLES R V EA
Sbjct: 77 RDSQGAILVYDITDEDSFRKVKNWVKELKKMLGNEVVLVVIGNKSDLESERSVPLHEAES 136
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+KS+G ++ TSA ++GI +VFL++ K +I
Sbjct: 137 YAKSVGAAHFLTSAKLNRGITEVFLHLCKEMI 168
>gi|241151857|ref|XP_002406775.1| RAS-related protein, putative [Ixodes scapularis]
gi|215493921|gb|EEC03562.1| RAS-related protein, putative [Ixodes scapularis]
Length = 215
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 113/166 (68%), Gaps = 2/166 (1%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY+ F+ T+ ASF K+N+ +V L +WDTAGQE+F ++ P+YY
Sbjct: 24 VGKTSLVLRYVQNKFNDKHFSTLQASFLEKKLNIAGKRVHLAIWDTAGQEKFHALGPIYY 83
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WV+EL++ + + L +VGNKTDLE R V EA
Sbjct: 84 RDSNGAILVYDITDEDSFQKVKNWVRELRKMLGGDVCLTIVGNKTDLEKQRAVPVAEAEA 143
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ--ESLHTSSL 280
Y+ S+G T+ +TSA +GIE++FL++SK +I +++ + H +SL
Sbjct: 144 YAASVGATHLQTSAKLSRGIEELFLDLSKRMIEVAEANDEQHRNSL 189
>gi|390604985|gb|EIN14376.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 208
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 104/153 (67%), Gaps = 1/153 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER++S+APM
Sbjct: 16 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDQATVKFEIWDTAGQERYKSLAPM 75
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYRNAN A++V+DITQ S +TW++EL+R D +V+ + GNK DL + R+V +EEA
Sbjct: 76 YYRNANCAVVVYDITQTASLEKARTWIRELQRQADPSIVIALCGNKIDLAARRQVTQEEA 135
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G ++E SA +G+ DVF ++K L
Sbjct: 136 QKYAEEEGLLWFEASAKTGEGVSDVFTAIAKKL 168
>gi|156547415|ref|XP_001604485.1| PREDICTED: ras-related protein Rab-21-like [Nasonia vitripennis]
Length = 222
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 108/164 (65%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY+ F+ T+ ASFF K+N+ +V L +WDTAGQE+F ++ P+YY
Sbjct: 21 VGKTSVVLRYVEDKFNDKHISTLQASFFKKKLNINGKRVNLAIWDTAGQEKFHALGPIYY 80
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R +N A+LV+DIT +F +K WVKELK+ + + L + GNK DLE R V EEA
Sbjct: 81 RMSNGAILVYDITDEETFKKVKNWVKELKKMLGSDICLAIAGNKVDLEKERNVTIEEAEE 140
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSL 280
Y+K +G ++ TSA Q+ +E++FL++++ ++ + + S+L
Sbjct: 141 YAKQVGAVHFHTSAKQNLNVEEMFLDLTRRMMQHADQQEQKSTL 184
>gi|357521023|ref|XP_003630800.1| Ras-related protein Rab-5C [Medicago truncatula]
gi|355524822|gb|AET05276.1| Ras-related protein Rab-5C [Medicago truncatula]
Length = 190
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 103/153 (67%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GKTS+V+R++ FS + TIGA+FFT +++ E VK +WDTAGQER+ S+APM
Sbjct: 10 MGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHSLAPM 69
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR + AA++V+DIT SF K WV+E++R + L++ +V NK DLE R+V EE
Sbjct: 70 YYRGSAAAIVVYDITSMDSFVRAKKWVREVQRQANPNLIMLLVANKADLEDQRKVGNEEG 129
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+K G +++ETSA Q + ++F ++K L
Sbjct: 130 EEYAKENGMSFFETSAKTAQNVNELFYEIAKRL 162
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
+G GKTS+V+R++ FS + TIGA+FFT +++ E VK +
Sbjct: 10 MGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDI 54
>gi|393213286|gb|EJC98783.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 209
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T +++ + VK ++WDTAGQER++S+APMY
Sbjct: 17 VGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVSLEDGSTVKFEIWDTAGQERYKSLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNAN A++V+DITQ S KTW++EL+R D +V+ + GNK DLE R+V +EEA
Sbjct: 77 YRNANCAVVVYDITQSASLEKAKTWIRELQRQADPSIVIALCGNKVDLEERRQVLQEEAQ 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+Y+K G + ETSA G+ D+F ++K L
Sbjct: 137 NYAKEEGLMWGETSAKTGLGVNDIFTELAKKL 168
>gi|156366329|ref|XP_001627091.1| predicted protein [Nematostella vectensis]
gi|156213990|gb|EDO34991.1| predicted protein [Nematostella vectensis]
Length = 216
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 104/152 (68%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+++RY+ F+ T+ ASF ++N+ +V L +WDTAGQERF ++ P+YY
Sbjct: 20 VGKTSLMLRYVQDKFNDKHLTTLQASFLNKRLNINGQRVNLAIWDTAGQERFHALGPIYY 79
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WV+ELK+ + + + LC+ GNK DLE R V +A
Sbjct: 80 RDSNGAILVYDITDEDSFLKVKNWVRELKKMLGDDICLCIAGNKIDLEKDRHVEASDAEA 139
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+K++G ++ TSA ++GIE++F ++K ++
Sbjct: 140 YAKTVGAKHFHTSAKLNKGIEEMFFELTKRMV 171
>gi|14318622|gb|AAH09109.1| KIAA0118 protein, partial [Homo sapiens]
Length = 175
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 99/135 (73%)
Query: 138 TIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAI 197
T+ ASF T K+N+G +V L +WDTAGQERF ++ P+YYR++N A+LV+DIT SF +
Sbjct: 1 TLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKV 60
Query: 198 KTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIE 257
K WVKEL++ + + LC+VGNK DLE R V+ +EA Y++S+G +Y TSA Q++GIE
Sbjct: 61 KNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIE 120
Query: 258 DVFLNVSKGLICLSQ 272
++FL++ K +I +Q
Sbjct: 121 ELFLDLCKRMIETAQ 135
>gi|194768593|ref|XP_001966396.1| GF22152 [Drosophila ananassae]
gi|190617160|gb|EDV32684.1| GF22152 [Drosophila ananassae]
Length = 225
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 118/173 (68%), Gaps = 4/173 (2%)
Query: 117 VGKTSMVVRYIGKMF-SHHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPM 174
VGKTS+V+RY+ F S H+S T+ ASF T K+N+ + K +L +WDTAGQERF ++ P+
Sbjct: 25 VGKTSLVLRYMEDRFNSQHLS-TLQASFVTRKVNLEDGRKAQLNIWDTAGQERFHALGPI 83
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR ++ ALLV+DIT SF +K+WV+EL++ + L +VGNKTDLE R V +EA
Sbjct: 84 YYRGSDGALLVYDITDQDSFQKVKSWVRELRQMRGTDIALIIVGNKTDLEEQRAVMHQEA 143
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI-CLSQESLHTSSLRVYDSD 286
Y++++G Y ETSA +++G+ ++F +++ ++ LSQ +S LR+ D
Sbjct: 144 MQYARTVGAQYVETSAKENEGVTELFELLTQLMLEQLSQREPDSSPLRLQSPD 196
>gi|298705900|emb|CBJ29030.1| Rab5, RAB family GTPase [Ectocarpus siliculosus]
Length = 195
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 103/152 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+ +VVR++ F + PTIGA+F T K+ + + VK ++WDTAGQER+RS+APMY
Sbjct: 18 AVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+D+T SF K+WVKEL+R D +++ + GNK DLE R+V EEA
Sbjct: 78 YRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEAR 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA Q ++ +F+ +++ L
Sbjct: 138 LYAEDNGLIHMETSAKSAQNVKSIFVEIAQKL 169
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+ +VVR++ F + PTIGA+F T K+ + + VK ++
Sbjct: 18 AVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEI 61
>gi|363753442|ref|XP_003646937.1| hypothetical protein Ecym_5362 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890573|gb|AET40120.1| hypothetical protein Ecym_5362 [Eremothecium cymbalariae
DBVPG#7215]
Length = 209
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 106/161 (65%), Gaps = 3/161 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ FS + PTIGA+F T ++N+G +K ++WDTAGQERF S+APMY
Sbjct: 17 AVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNMGNQTIKFEIWDTAGQERFASLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL---ESSREVNRE 232
YRNA AAL+V+DIT+ SF + WVKEL + +++ +VGNK DL + R+V RE
Sbjct: 77 YRNAQAALVVYDITKPQSFIKARHWVKELHEQASKSIIIALVGNKLDLLESDEERKVARE 136
Query: 233 EAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQE 273
EA ++ G ++ETSA + +VFL + + + QE
Sbjct: 137 EAESLAQEEGLLFFETSAKTGDNVNEVFLGIGEKIPLKQQE 177
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ FS + PTIGA+F T ++N+G +K ++
Sbjct: 17 AVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNMGNQTIKFEI 60
>gi|299756416|ref|XP_001829316.2| GTP-binding protein RAB5 [Coprinopsis cinerea okayama7#130]
gi|298411667|gb|EAU92276.2| GTP-binding protein RAB5 [Coprinopsis cinerea okayama7#130]
Length = 206
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 107/153 (69%), Gaps = 1/153 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG-ENKVKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T + + ++ VK ++WDTAGQER++S+APM
Sbjct: 16 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDQSTVKFEIWDTAGQERYKSLAPM 75
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYRNAN A++V+DITQ S +TW++EL+R D +V+ + GNK DL + R+V++EEA
Sbjct: 76 YYRNANCAVVVYDITQSASLEKARTWIRELQRQADPSIVIALCGNKLDLAARRQVSQEEA 135
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA +G++++F ++K L
Sbjct: 136 QKYAEEEGLMWAETSAKTGEGVQEIFTAIAKKL 168
>gi|289741547|gb|ADD19521.1| GTPase Rab21 [Glossina morsitans morsitans]
Length = 225
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 108/154 (70%), Gaps = 3/154 (1%)
Query: 117 VGKTSMVVRYIGKMFS-HHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPM 174
VGKTS+V+RY+ F+ HIS T+ ASF T KIN+ KV+L +WDTAGQERF ++ P+
Sbjct: 24 VGKTSIVLRYVEDKFNPQHIS-TLQASFLTKKINLDNGAKVQLNIWDTAGQERFHALGPI 82
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR ++ A+LV+DIT SF +K WVKELKR + +VL + GNKTDLE+ R V E+A
Sbjct: 83 YYRGSHGAILVYDITDEDSFQKVKNWVKELKRMLGSDIVLTIAGNKTDLENERTVPFEDA 142
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+ S+G Y+ETSA ++ IE +F +++ +I
Sbjct: 143 LDYADSVGAYYFETSAKANENIEKLFTELTEFMI 176
>gi|301090951|ref|XP_002895671.1| Rab21/Rab5 family GTPase, putative [Phytophthora infestans T30-4]
gi|262097098|gb|EEY55150.1| Rab21/Rab5 family GTPase, putative [Phytophthora infestans T30-4]
Length = 278
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 108/152 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+++RYI + T+ AS+ ++ V +V L +WDTAGQERF ++ P+YY
Sbjct: 19 VGKTSILLRYIKGEYDERQVSTLQASYLDKRLLVDNRRVALSLWDTAGQERFHALGPIYY 78
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R+A+ ALLV+DIT SF ++TWV+EL+R V + + +C+ GNK+DL +R+V +EA
Sbjct: 79 RDADGALLVYDITDAESFRKVRTWVRELRRIVGDDISICIAGNKSDLHRNRKVPEDEAKR 138
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++S+G +++TSA ++G+EDVF+ +++ ++
Sbjct: 139 YAESVGAAHFDTSAKLNRGLEDVFVELTRRML 170
>gi|221123404|ref|XP_002154758.1| PREDICTED: ras-related protein Rab-22A-like [Hydra magnipapillata]
Length = 196
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 105/152 (69%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V+R++ F + TIGASF + I++GEN K Q+WDTAGQE+++S+APMY
Sbjct: 18 GVGKSSLVLRFVTDRFDIQSTATIGASFMSKTISLGENSYKYQIWDTAGQEKYKSLAPMY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+D+T ++F ++KTWV+EL+ LV+ + GNK+DL+ REV+ E
Sbjct: 78 YRGAAAAIVVYDLTVENTFKSVKTWVRELRELGPPGLVIAIAGNKSDLKDQREVSLEAGE 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+Y+ IG + E SAL Q + +F ++K L
Sbjct: 138 NYASEIGAVFAEVSALTSQNVAYIFQEITKKL 169
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL--RTGLKVSKIPVPTR 397
GVGK+S+V+R++ F + TIGASF + I++GEN K Q+ G + K P
Sbjct: 18 GVGKSSLVLRFVTDRFDIQSTATIGASFMSKTISLGENSYKYQIWDTAGQEKYKSLAPMY 77
Query: 398 NREGATTGRITEPDTMNNNNKKKNRVATTGRPVRSRGGPDRLAINPEGVYCNARFMQAIT 457
R GA + T+ N K V T R +R G P L I G + + + ++
Sbjct: 78 YR-GAAAAIVVYDLTVENTFKS---VKTWVRELRELGPPG-LVIAIAGNKSDLKDQREVS 132
Query: 458 LHIGD 462
L G+
Sbjct: 133 LEAGE 137
>gi|348685093|gb|EGZ24908.1| hypothetical protein PHYSODRAFT_350023 [Phytophthora sojae]
Length = 282
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 108/152 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+++RYI + T+ AS+ ++ V +V L +WDTAGQERF ++ P+YY
Sbjct: 19 VGKTSILLRYIKGEYDERQVSTLQASYLDKRLLVDNRRVALSLWDTAGQERFHALGPIYY 78
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R+A+ ALLV+DIT SF ++TWV+EL+R V + + +C+ GNK+DL +R+V +EA
Sbjct: 79 RDADGALLVYDITDAESFRKVRTWVRELRRIVGDDISICIAGNKSDLHRNRKVPEDEARR 138
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++S+G +++TSA ++G+EDVF+ +++ ++
Sbjct: 139 YAESVGAAHFDTSAKLNRGLEDVFVELTRRML 170
>gi|442759105|gb|JAA71711.1| Putative gtpase [Ixodes ricinus]
Length = 215
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 113/166 (68%), Gaps = 2/166 (1%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY+ F+ T+ ASF +N+ +V L +WDTAGQE+F ++ P+YY
Sbjct: 24 VGKTSLVLRYVQNKFNDKHLTTLQASFLQKSLNIAGKRVHLAIWDTAGQEKFHALGPIYY 83
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K+WV+EL++ + + L +VGNKTDLE R V EA
Sbjct: 84 RDSNGAILVYDITDEDSFQKVKSWVRELRKMLGGDVCLTIVGNKTDLEKQRAVPVAEAEA 143
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ--ESLHTSSL 280
Y+ S+G T+ +TSA +GIE++FL++SK +I +++ + H +SL
Sbjct: 144 YAASVGATHLQTSAKLSRGIEELFLDLSKRMIEVAEANDEQHRNSL 189
>gi|320165409|gb|EFW42308.1| Rab31 protein [Capsaspora owczarzaki ATCC 30864]
Length = 201
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 109/160 (68%), Gaps = 3/160 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V+R++ F+ + TIGASF + + V + K Q+WDTAGQE++R +APMY
Sbjct: 18 GVGKSSLVLRFVADSFNENSESTIGASFMSKTLIVEDQTFKYQIWDTAGQEKYRGLAPMY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNA AA++V++IT+ SF A+K WVKEL++ ++L + GNK+DLES R+V+ +EA
Sbjct: 78 YRNAAAAIIVYEITRKQSFEALKHWVKELRQFGPSNIILAIAGNKSDLESQRQVSSDEAK 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
Y+ SI + ETSAL + +F +SK L QES+
Sbjct: 138 EYADSIDALFVETSALTADNVSYLFEALSKR---LPQESI 174
>gi|356511351|ref|XP_003524390.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
Length = 199
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 102/154 (66%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GKTS+V+R++ FS + TIGA+FFT +++ E VK +WDTAGQER+ S+APM
Sbjct: 19 MGAGKTSLVLRFVKGEFSEYQESTIGAAFFTHVLSLNEATVKFDIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+E++R + L + +V NK DLE R+V EE
Sbjct: 79 YYRGAAAAIVVYDITSMDSFVRAKKWVREVQRQANSSLTMFLVANKADLEDERKVRYEEG 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+K G ++ ETSA Q + ++F ++K L+
Sbjct: 139 EEYAKENGLSFLETSAKTAQNVNELFYEIAKRLV 172
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
+G GKTS+V+R++ FS + TIGA+FFT +++ E VK +
Sbjct: 19 MGAGKTSLVLRFVKGEFSEYQESTIGAAFFTHVLSLNEATVKFDI 63
>gi|149898836|gb|ABR27886.1| Ras-related small GTPase [Triatoma infestans]
Length = 218
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 106/157 (67%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY+ F+ T+ A+F K+N+G ++ L +WDTAGQERF ++ P+YY
Sbjct: 25 VGKTSVVLRYVEDKFNEKHLTTLQATFLNKKLNIGGKRINLAIWDTAGQERFHALGPIYY 84
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R +N A+LV+DIT SF +K WVKELK+ + + L + GNK DL+ R V E A +
Sbjct: 85 RMSNGAVLVYDITDEDSFQKVKNWVKELKKMLGSEICLTIAGNKIDLQKERNVPVETAEN 144
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQE 273
Y+ S+G ++ TSA Q+ GIE++FL +++ ++ +QE
Sbjct: 145 YAASVGAVHFHTSAKQNTGIEEMFLELTQRMMQRAQE 181
>gi|302694753|ref|XP_003037055.1| hypothetical protein SCHCODRAFT_64045 [Schizophyllum commune H4-8]
gi|300110752|gb|EFJ02153.1| hypothetical protein SCHCODRAFT_64045 [Schizophyllum commune H4-8]
Length = 208
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 104/153 (67%), Gaps = 1/153 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER++S+APM
Sbjct: 16 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDGTTVKFEIWDTAGQERYKSLAPM 75
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYRNAN A++V+DITQ S +TW++EL+R D +V+ + GNK DL + R+V +EEA
Sbjct: 76 YYRNANCAVVVYDITQSTSLEKARTWIRELQRQADPSIVIALCGNKADLAARRQVTQEEA 135
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA +G+ D+F ++K L
Sbjct: 136 QKYAEEEGLMWGETSAKTGEGVADIFTAIAKKL 168
>gi|393909019|gb|EFO27861.2| Ras family protein [Loa loa]
Length = 174
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 101/147 (68%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+++R+ G+ F +SPT+GASF ++ + + V+LQ+WDTAGQER+ SM PMY
Sbjct: 25 GVGKTSIILRHDGQGFYSKVSPTLGASFISSFLVLDGKSVELQIWDTAGQERYASMLPMY 84
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
RNA AA++V+DIT SF IK WV E+KR P+ L VVGNK DLE++R V E
Sbjct: 85 LRNAVAAVIVYDITDRESFQEIKKWVNEVKRGSTVPVSLFVVGNKLDLENARAVQCHEGA 144
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLN 262
Y++ IG ++ETSA+ +G + LN
Sbjct: 145 QYAEQIGAAFHETSAMNGEGADHADLN 171
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS+++R+ G+ F +SPT+GASF ++ + + V+LQ+
Sbjct: 25 GVGKTSIILRHDGQGFYSKVSPTLGASFISSFLVLDGKSVELQI 68
>gi|312082931|ref|XP_003143650.1| hypothetical protein LOAG_08070 [Loa loa]
gi|307761187|gb|EFO20421.1| hypothetical protein LOAG_08070 [Loa loa]
Length = 219
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 107/159 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+++RYI F+ T+ ASF K++V V+L +WDTAGQE+F ++ P+Y
Sbjct: 26 AVGKTSLMLRYIENRFNPQHVSTLQASFLCKKLHVDGQTVELNIWDTAGQEKFHALGPIY 85
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+++ ALL++DIT HSF +K WVKELKR + + + L ++GNK DLE +R V+ EA
Sbjct: 86 YRDSHGALLIYDITDTHSFEKVKMWVKELKRMLGDDVYLMIIGNKLDLERNRNVDINEAI 145
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQES 274
Y+K IG ++ETSA + G+ VF + KGL+ ++ S
Sbjct: 146 GYAKLIGAKHFETSAKDNIGVTQVFDYLVKGLVERTRHS 184
>gi|426226572|ref|XP_004007415.1| PREDICTED: ras-related protein Rab-21-like [Ovis aries]
Length = 196
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 97/132 (73%)
Query: 141 ASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTW 200
ASF T K+N+G +V L +WDTAGQERF ++ P+YYR++N A+LV+DIT SF +K W
Sbjct: 25 ASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNW 84
Query: 201 VKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVF 260
VKEL++ + + LC+VGNK DLE R V+ +EA Y++S+G +Y TSA Q++GIE++F
Sbjct: 85 VKELRKMLGNEICLCIVGNKVDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELF 144
Query: 261 LNVSKGLICLSQ 272
L++ K +I +Q
Sbjct: 145 LDLCKRMIETAQ 156
>gi|149743106|ref|XP_001490458.1| PREDICTED: ras-related protein Rab-21-like [Equus caballus]
Length = 181
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 97/132 (73%)
Query: 141 ASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTW 200
ASF T K+N+G +V L +WDTAGQERF ++ P+YYR++N A+LV+DIT SF +K W
Sbjct: 10 ASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNW 69
Query: 201 VKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVF 260
VKEL++ + + LC+VGNK DLE R V+ +EA Y++S+G +Y TSA Q++GIE++F
Sbjct: 70 VKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELF 129
Query: 261 LNVSKGLICLSQ 272
L++ K +I +Q
Sbjct: 130 LDLCKRMIETAQ 141
>gi|348580399|ref|XP_003475966.1| PREDICTED: ras-related protein Rab-21-like [Cavia porcellus]
Length = 199
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 97/132 (73%)
Query: 141 ASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTW 200
ASF T K+N+G +V L +WDTAGQERF ++ P+YYR++N A+LV+DIT SF +K W
Sbjct: 28 ASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNW 87
Query: 201 VKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVF 260
VKEL++ + + LC+VGNK DLE R V+ +EA Y++S+G +Y TSA Q++GIE++F
Sbjct: 88 VKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELF 147
Query: 261 LNVSKGLICLSQ 272
L++ K +I +Q
Sbjct: 148 LDLCKRMIETAQ 159
>gi|301104324|ref|XP_002901247.1| ras family GTPase, putative [Phytophthora infestans T30-4]
gi|262101181|gb|EEY59233.1| ras family GTPase, putative [Phytophthora infestans T30-4]
Length = 278
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 108/152 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+++RYI + T+ AS+ ++ V +V L +WDTAGQERF ++ P+YY
Sbjct: 19 VGKTSILLRYIKGEYDERQVSTLQASYLDKRLLVDNCRVALSLWDTAGQERFHALGPIYY 78
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R+A+ ALLV+DIT SF ++TWV+EL+R V + + +C+ GNK+DL +R+V +EA
Sbjct: 79 RDADGALLVYDITDAESFRKVRTWVRELRRIVGDDISICIAGNKSDLHRNRKVPEDEAKR 138
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++S+G +++TSA ++G+EDVF+ +++ ++
Sbjct: 139 YAESVGAAHFDTSAKLNRGLEDVFVELTRRML 170
>gi|359482942|ref|XP_002284702.2| PREDICTED: ras-related protein RHN1-like [Vitis vinifera]
gi|297743285|emb|CBI36152.3| unnamed protein product [Vitis vinifera]
Length = 199
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 114/173 (65%), Gaps = 2/173 (1%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GKTS+V+R++ F H PTIGA+FFT +++ E VK +WDTAGQER+ S+APM
Sbjct: 19 MGTGKTSLVLRFVKGQFFEHQEPTIGAAFFTQLLSLNEATVKFDIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DI+ +F K WV+EL++ ++ LV+ +V NK DLES REVN +E
Sbjct: 79 YYRGAAAAVVVYDISNVDTFVRAKKWVQELQKQGNKNLVMALVANKCDLESKREVNTQEG 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDN 287
S+ G + ETSA I ++F ++K L ++Q S S + +++++N
Sbjct: 139 EKLSEENGMFFIETSAKTSLNINELFYEIAKRL-AIAQPS-QPSGMNLHETEN 189
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
+G GKTS+V+R++ F H PTIGA+FFT +++ E VK +
Sbjct: 19 MGTGKTSLVLRFVKGQFFEHQEPTIGAAFFTQLLSLNEATVKFDI 63
>gi|383851917|ref|XP_003701477.1| PREDICTED: uncharacterized protein LOC100882876 [Megachile
rotundata]
Length = 865
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 107/163 (65%), Gaps = 5/163 (3%)
Query: 416 NNKKKNRVATTGRPVRSRGGPDRLAINPEGVYCNARFMQAITLHIGDKVTVYTVHGKQFE 475
N+K+KNR + T R R+RG P + EGVY NA FM AIT H+G+ V + T++G +E
Sbjct: 2 NSKRKNR-SNTNRSPRARG-PQERCVAAEGVYNNAHFMHAITSHVGNIVQIQTLNGSVYE 59
Query: 476 GYLKTFSKQFELVISMTHQVDPENPQCIDPNTVVDMKIFKLDDIVRIEAKNVDLEYAVRD 535
G +TFS QF++V+ M H+V E I +VV+ IFK DI+ + AK+VDL+YA+RD
Sbjct: 60 GIFRTFSSQFDVVLEMAHRV--EGSGKISVESVVEKLIFKPQDIITMSAKDVDLDYAIRD 117
Query: 536 TFATDTAISKFNGVIGERELEPWAEDMLGPGGDDDFELDQMCN 578
TF TDT ISK+NG+IGE+ELEPW G DD ELD N
Sbjct: 118 TFRTDTVISKYNGLIGEKELEPWDAPPATMNG-DDLELDGTTN 159
>gi|330798937|ref|XP_003287505.1| Rab GTPase [Dictyostelium purpureum]
gi|325082451|gb|EGC35932.1| Rab GTPase [Dictyostelium purpureum]
Length = 208
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 101/152 (66%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RYI F+ T A FF IN+ +V L +WDTAGQERF ++ P+YY
Sbjct: 18 VGKTSIVLRYIQNTFNDKHLMTQHAGFFQKNININGKRVCLTIWDTAGQERFHALGPIYY 77
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R + AL+V+DIT SF K W+KELK + + LC++GNK DLE +R + EA
Sbjct: 78 RGSQGALVVYDITDNDSFIKAKNWIKELKTMLGNDISLCIIGNKCDLEKTRVITLAEAEA 137
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+KS+G +Y TSA ++GIED+FL++++ ++
Sbjct: 138 YAKSVGAIHYSTSAKLNKGIEDLFLDLTRRML 169
>gi|307203700|gb|EFN82666.1| Ras-related protein Rab-21 [Harpegnathos saltator]
Length = 243
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 107/164 (65%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+ +RY+ F+ T+ ASF K+N+ +V L +WDTAGQE+F ++ P+YY
Sbjct: 24 VGKTSVALRYVEDKFNDRHISTVQASFLNKKLNINGKRVNLAIWDTAGQEKFHALGPIYY 83
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R +N A+LV+DIT +F +K WVKELK+ + + L + GNK DLE R V EEA
Sbjct: 84 RMSNGAILVYDITDEDTFQKVKNWVKELKKMLGSEICLAIAGNKVDLEKDRNVAIEEAEE 143
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSL 280
Y+K +G ++ TSA +Q IE++FL++++ ++ + E+ S+L
Sbjct: 144 YAKQVGAMHFHTSAKLNQNIEEMFLDLTRRMMQHADEAEQKSTL 187
>gi|332022383|gb|EGI62695.1| Ras-related protein Rab-21 [Acromyrmex echinatior]
Length = 239
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 107/164 (65%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+ +RY+ F+ T+ ASF K+N+ +V L +WDTAGQE+F ++ P+YY
Sbjct: 22 VGKTSVALRYVEDKFNDKHITTLQASFLNKKLNINGKRVNLAIWDTAGQEKFHALGPIYY 81
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R +N A+LV+DIT +F +K WVKELK+ + + L + GNK DLE R V EEA
Sbjct: 82 RMSNGAILVYDITDEDTFQKVKNWVKELKKMLGSEICLVIAGNKVDLEKDRNVATEEAEE 141
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSL 280
Y+K +G ++ TSA +Q IE++FL++++ ++ + E+ S+L
Sbjct: 142 YAKQVGAMHFHTSAKLNQNIEEMFLDLTQRMMQRADEAEQKSTL 185
>gi|224070895|ref|XP_002303285.1| predicted protein [Populus trichocarpa]
gi|222840717|gb|EEE78264.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 102/153 (66%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GKTS+V+R++ F H PTIGA+FFT +++ E VK +WDTAGQER+ S+APM
Sbjct: 19 MGTGKTSLVLRFVKGQFFDHQEPTIGAAFFTQILSLTEATVKFDIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DI+ +F K WV+EL+R + +V+ +V NK DL+S REV E+
Sbjct: 79 YYRGAAAAVIVYDISSMDTFVRAKRWVQELQRQGNPKMVMALVANKLDLDSKREVQNEDG 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+S+ G + ETSA Q I ++F ++K L
Sbjct: 139 EQFSQENGMFFMETSAKTAQNINELFYEIAKRL 171
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
+G GKTS+V+R++ F H PTIGA+FFT +++ E VK +
Sbjct: 19 MGTGKTSLVLRFVKGQFFDHQEPTIGAAFFTQILSLTEATVKFDI 63
>gi|224046076|ref|XP_002190163.1| PREDICTED: ras-related protein Rab-31 [Taeniopygia guttata]
Length = 195
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKELK + E + + GNK DL REV ++A
Sbjct: 76 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENNAMPIAGNKCDLSDIREVPMKDAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SIG ETSA IE++F +S+
Sbjct: 136 EYAESIGAIVVETSAKNAVNIEELFQGISQ 165
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 51
>gi|223995249|ref|XP_002287308.1| canine-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220976424|gb|EED94751.1| canine-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 193
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 104/152 (68%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+ +VVR++ F PTIGA+F T + + + VK ++WDTAGQER+RS+APMY
Sbjct: 17 AVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDDATVKFEIWDTAGQERYRSLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K+WVKEL+R D+ +V+ + GNK DLE+ R+V+ EEA
Sbjct: 77 YRGAAAAIVVYDITNPDSFAGAKSWVKELQRRGDQDVVIAMAGNKADLEARRQVDFEEAN 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA ++ +F+ +++ L
Sbjct: 137 AYAEENGILHMETSAKNANNVKALFVEIARRL 168
>gi|221500833|ref|NP_001036321.2| Rab21, isoform C [Drosophila melanogaster]
gi|442617211|ref|NP_001259785.1| Rab21, isoform D [Drosophila melanogaster]
gi|220901851|gb|EAA46055.3| Rab21, isoform C [Drosophila melanogaster]
gi|440217029|gb|AGB95623.1| Rab21, isoform D [Drosophila melanogaster]
Length = 222
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 121/180 (67%), Gaps = 4/180 (2%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY+ F+ T+ ASF + K+++ + + +L +WDTAGQERF ++ P+Y
Sbjct: 24 VGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERFHALGPIY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR ++ ALLV+DIT SF +K+WV+EL++ + L +VGNKTDLE R V +EA
Sbjct: 84 YRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTHDEAL 143
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI-CLSQESLHTSSLRVY--DSDNITSAN 292
Y++++G Y ETSA +++G+ ++F +++ ++ LSQ S LR+ D+DN+ +++
Sbjct: 144 QYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLSQRQPDASPLRLQNPDTDNLNNSD 203
>gi|21429138|gb|AAM50288.1| RE42508p [Drosophila melanogaster]
gi|220948536|gb|ACL86811.1| Rab21-PA [synthetic construct]
gi|220957812|gb|ACL91449.1| Rab21-PA [synthetic construct]
Length = 222
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 121/180 (67%), Gaps = 4/180 (2%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY+ F+ T+ ASF + K+++ + + +L +WDTAGQERF ++ P+Y
Sbjct: 24 VGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERFHALGPIY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR ++ ALLV+DIT SF +K+WV+EL++ + L +VGNKTDLE R V +EA
Sbjct: 84 YRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTHDEAL 143
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI-CLSQESLHTSSLRVY--DSDNITSAN 292
Y++++G Y ETSA +++G+ ++F +++ ++ LSQ S LR+ D+DN+ +++
Sbjct: 144 QYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLSQRQPDASPLRLQNPDTDNLNNSD 203
>gi|384496634|gb|EIE87125.1| hypothetical protein RO3G_11836 [Rhizopus delemar RA 99-880]
Length = 234
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 115/178 (64%), Gaps = 15/178 (8%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ + + + PTIGA+F K N + +K ++WDTAGQERF S+APMY
Sbjct: 31 AVGKSSIVLRFVDRQYVENREPTIGAAFLNQKCNFKDRSIKFEIWDTAGQERFHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL------------ 223
YRN+ AA++V+DIT+ + K+WVKEL+R + +V+ +VGNK DL
Sbjct: 91 YRNSQAAIVVYDITKAATLDKAKSWVKELQRQANTDIVIALVGNKLDLVEGEDGEPLEDE 150
Query: 224 ESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLR 281
E REV++E+A Y+ G ++ETSA Q +++VF ++++ + E++H+S+ R
Sbjct: 151 EHEREVSKEDAQAYADEAGLLFFETSAKSAQNVDNVFSSIAQKIPL---ETMHSSNSR 205
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ + + + PTIGA+F K N + +K ++
Sbjct: 31 AVGKSSIVLRFVDRQYVENREPTIGAAFLNQKCNFKDRSIKFEI 74
>gi|383858269|ref|XP_003704624.1| PREDICTED: ras-related protein Rab-21-like [Megachile rotundata]
Length = 222
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 110/165 (66%), Gaps = 2/165 (1%)
Query: 117 VGKTSMVVRYI-GKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+ +RY+ GK HIS T+ ASF K+ V KV L +WDTAGQE+F ++ P+Y
Sbjct: 24 VGKTSVALRYVEGKFNDKHIS-TLQASFLNKKLTVDGKKVNLAIWDTAGQEKFHALGPIY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR +N A+LV+DIT +F +K WVKELK+ + + L + GNK DLE +R V+ +EA
Sbjct: 83 YRMSNGAILVYDITDEDTFQKVKNWVKELKKMLGSEICLAIAGNKIDLEKNRSVSIQEAE 142
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSL 280
Y+K +G +Y TSA Q IE++F+++++ +I + E+ S+L
Sbjct: 143 EYAKQVGAMHYHTSAKLSQNIEEMFVDLTQRMIQHADEAEQKSTL 187
>gi|170583481|ref|XP_001896599.1| ras-related protein Rab-21 [Brugia malayi]
gi|158596123|gb|EDP34522.1| ras-related protein Rab-21, putative [Brugia malayi]
Length = 219
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 118/194 (60%), Gaps = 9/194 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+++RY+ FS T+ ASF + K++V V L +WDTAGQE+F ++ P+Y
Sbjct: 26 AVGKTSLMLRYVENKFSPQHVSTLQASFLSKKLHVDGQTVVLNIWDTAGQEKFHALGPIY 85
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+++ ALL++D+T HSF K ELKR + + + L ++GNK DLE +R VN +EA
Sbjct: 86 YRDSHGALLIYDVTDSHSFE--KARKNELKRMLGDDVYLMIIGNKMDLERNRNVNTDEAI 143
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPRG 295
Y+KSIG Y+ETSA + G+ VF + KGL+ +Q S + +ITS++ G
Sbjct: 144 GYAKSIGAKYFETSAKDNIGVTQVFDYLVKGLVERAQHS-------KFQGIDITSSSHYG 196
Query: 296 VVEITPLSSLDTPP 309
L +D PP
Sbjct: 197 ASRRNDLLIIDDPP 210
>gi|322778765|gb|EFZ09181.1| hypothetical protein SINV_03538 [Solenopsis invicta]
Length = 228
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 107/164 (65%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+ +RY+ F+ T+ ASF K+N+ +V L +WDTAGQE+F ++ P+YY
Sbjct: 22 VGKTSVALRYVEDKFNDKHITTLQASFLNKKLNINGKRVNLAIWDTAGQEKFHALGPIYY 81
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R +N A+LV+DIT +F +K WVKELK+ + + L + GNK DLE R V EEA
Sbjct: 82 RMSNGAILVYDITDEDTFQKVKNWVKELKKMLGSEICLVIAGNKVDLEKDRNVAIEEAEE 141
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSL 280
Y+K +G ++ TSA +Q IE++FL++++ ++ + E+ S+L
Sbjct: 142 YAKQVGAMHFHTSAKLNQNIEEMFLDLTQRMMQHADEAEQKSTL 185
>gi|195044333|ref|XP_001991801.1| GH12858 [Drosophila grimshawi]
gi|193901559|gb|EDW00426.1| GH12858 [Drosophila grimshawi]
Length = 229
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 100/145 (68%), Gaps = 1/145 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-GENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RYI F+ H T+ ASF T K+ + E + L +WDTAGQERF ++ P+Y
Sbjct: 24 VGKTSLVLRYIEDKFNTHHLSTLQASFVTKKVTLPDERRALLNIWDTAGQERFHALGPIY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR ++ ALLV+DIT SF +K+WV+ELK+ + L +VGNKTDLE R ++ E A
Sbjct: 84 YRGSDGALLVYDITDQDSFQKVKSWVRELKQMRGSEIALVIVGNKTDLEEQRAISYETAL 143
Query: 236 HYSKSIGGTYYETSALQDQGIEDVF 260
Y++++G Y ETSA +++G+ D+F
Sbjct: 144 LYAQTVGAQYVETSAKENEGVHDLF 168
>gi|50305705|ref|XP_452813.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641946|emb|CAH01664.1| KLLA0C13728p [Kluyveromyces lactis]
Length = 208
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 112/181 (61%), Gaps = 3/181 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F+ + PTIGA+F T ++N+ ++ +K ++WDTAGQERF S+APMY
Sbjct: 17 AVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVNMADHTIKFEIWDTAGQERFASLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL---ESSREVNRE 232
YRNA AAL+V+D+T+ SF + WVKEL + +V+ +VGNK DL E R+V +E
Sbjct: 77 YRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKGIVIALVGNKMDLLESEEDRKVAKE 136
Query: 233 EAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSAN 292
EA S+ ++ETSA + +VFL + + + + +T LR + I
Sbjct: 137 EAEKLSQEENLLFFETSAKTGDNVNEVFLAIGEKIPLKKSDGSNTDGLRGTEDGRIDLNK 196
Query: 293 P 293
P
Sbjct: 197 P 197
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 32/44 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F+ + PTIGA+F T ++N+ ++ +K ++
Sbjct: 17 AVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVNMADHTIKFEI 60
>gi|194897947|ref|XP_001978753.1| GG17497 [Drosophila erecta]
gi|190650402|gb|EDV47680.1| GG17497 [Drosophila erecta]
Length = 222
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 116/178 (65%), Gaps = 2/178 (1%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY+ F+ T+ ASF T K+++ + + +L +WDTAGQERF ++ P+Y
Sbjct: 24 VGKTSLVLRYMEDRFNAQHLTTLQASFVTRKVSLEDGRRAQLNIWDTAGQERFHALGPIY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR ++ ALLV+DIT SF +K+WV+EL++ + L +VGNKTDLE R V +EA
Sbjct: 84 YRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTHDEAL 143
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI-CLSQESLHTSSLRVYDSDNITSAN 292
Y++++G Y ETSA +++G+ ++F ++ ++ LSQ S LR+ + D T N
Sbjct: 144 QYARTVGAQYVETSAKENEGVAELFELLTHLMLEQLSQRQPDASPLRLQNPDTDTLNN 201
>gi|115612989|ref|XP_790094.2| PREDICTED: ras-related protein Rab-31-like [Strongylocentrotus
purpuratus]
Length = 195
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 103/152 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ + I PTIGASF + + V E K Q+WDTAGQE++R +APMY
Sbjct: 15 GVGKSSIVQRFVSDTYYESIPPTIGASFMSKTLAVDEKMYKFQIWDTAGQEKYRGLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SF+ ++ W++EL+++ E +V+ + GNK DLE RE+ + A
Sbjct: 75 YRGAAAAIVVYDITSQASFSKVRDWIRELRQHGPENIVISIAGNKCDLEDLREIPVKIAA 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ +G + ETSA I+++F+ +SK L
Sbjct: 135 EYAEEVGAVFTETSAKTAANIKELFIAISKKL 166
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL--RTGLKVSKIPVPTR 397
GVGK+S+V R++ + I PTIGASF + + V E K Q+ G + + P
Sbjct: 15 GVGKSSIVQRFVSDTYYESIPPTIGASFMSKTLAVDEKMYKFQIWDTAGQEKYRGLAPMY 74
Query: 398 NREGATTGRITEPDTMNNNNKKKNRVATTGRPVRSRGGPDRLAINPEGVYCNARFMQAIT 457
R A + + + + +K ++ + R +R GP+ + I+ G C+ ++ I
Sbjct: 75 YRGAAAAIVVYDITSQASFSKVRDWI----RELRQH-GPENIVISIAGNKCDLEDLREIP 129
Query: 458 LHIGDKVTVYTVHGKQF-EGYLKTFSKQFELVISMTHQVDPE 498
+ I + G F E KT + EL I+++ ++ PE
Sbjct: 130 VKIAAEYAEEV--GAVFTETSAKTAANIKELFIAISKKLPPE 169
>gi|304604|gb|AAC37383.1| RabB [Dictyostelium discoideum]
gi|739977|prf||2004272D rabB gene
Length = 213
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 102/152 (67%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V RYI +F+ T A FF IN+G ++ L +WDTAGQERF ++ P+YY
Sbjct: 18 VGKTSIVFRYIDNIFNDKHLMTQHAGFFQKHINIGGKRICLTIWDTAGQERFHALGPIYY 77
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R + AL+V+DIT SF K W+KELK + + LC++GNK DLE +R + +A
Sbjct: 78 RGSQGALVVYDITDNDSFIKAKNWIKELKTMLGNDISLCIIGNKCDLEKTRVIPLADAEA 137
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+KS+G +Y TSA ++GIE++FL++++ +I
Sbjct: 138 YAKSVGAIHYSTSAKLNKGIEELFLDLTRRMI 169
>gi|340728634|ref|XP_003402624.1| PREDICTED: hypothetical protein LOC100648151 isoform 2 [Bombus
terrestris]
Length = 848
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 109/163 (66%), Gaps = 5/163 (3%)
Query: 416 NNKKKNRVATTGRPVRSRGGPDRLAINPEGVYCNARFMQAITLHIGDKVTVYTVHGKQFE 475
N+K+KNR + T R R+RG P + EGVY NA FM AIT H+G+ V + T++G +E
Sbjct: 2 NSKRKNR-SNTNRSPRARG-PQERCVAAEGVYNNAHFMHAITSHVGNIVQIQTLNGSMYE 59
Query: 476 GYLKTFSKQFELVISMTHQVDPENPQCIDPNTVVDMKIFKLDDIVRIEAKNVDLEYAVRD 535
G +TFS QF++V+ M H+V+ ++ +VV+ IFK DI+ + AK++DL+YA+RD
Sbjct: 60 GIFRTFSSQFDVVLEMAHRVEVTGKFSVE--SVVEKLIFKPQDIITMSAKDIDLDYAIRD 117
Query: 536 TFATDTAISKFNGVIGERELEPWAEDMLGPGGDDDFELDQMCN 578
+F TDTAISK+NGV+GE+ELEPW G DD +LD N
Sbjct: 118 SFRTDTAISKYNGVVGEKELEPWDAPPATMNG-DDLKLDGTTN 159
>gi|340728632|ref|XP_003402623.1| PREDICTED: hypothetical protein LOC100648151 isoform 1 [Bombus
terrestris]
Length = 860
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 109/163 (66%), Gaps = 5/163 (3%)
Query: 416 NNKKKNRVATTGRPVRSRGGPDRLAINPEGVYCNARFMQAITLHIGDKVTVYTVHGKQFE 475
N+K+KNR + T R R+RG P + EGVY NA FM AIT H+G+ V + T++G +E
Sbjct: 2 NSKRKNR-SNTNRSPRARG-PQERCVAAEGVYNNAHFMHAITSHVGNIVQIQTLNGSMYE 59
Query: 476 GYLKTFSKQFELVISMTHQVDPENPQCIDPNTVVDMKIFKLDDIVRIEAKNVDLEYAVRD 535
G +TFS QF++V+ M H+V+ ++ +VV+ IFK DI+ + AK++DL+YA+RD
Sbjct: 60 GIFRTFSSQFDVVLEMAHRVEVTGKFSVE--SVVEKLIFKPQDIITMSAKDIDLDYAIRD 117
Query: 536 TFATDTAISKFNGVIGERELEPWAEDMLGPGGDDDFELDQMCN 578
+F TDTAISK+NGV+GE+ELEPW G DD +LD N
Sbjct: 118 SFRTDTAISKYNGVVGEKELEPWDAPPATMNG-DDLKLDGTTN 159
>gi|326381131|ref|NP_001191951.1| ras-related protein Rab-21-like [Acyrthosiphon pisum]
Length = 226
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 101/152 (66%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ ASF K+N+ ++ L +WDTAGQERF ++ P+YY
Sbjct: 30 VGKTSLVLRYTEDKFNDKHVSTLQASFVKKKLNLNGRRINLSIWDTAGQERFHALGPIYY 89
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R +N A+LV+DIT SF +K W+KELK+ + + L + GNK DLE R V+ E+A
Sbjct: 90 RMSNGAILVYDITDEDSFQKVKNWIKELKKMLGSEICLVIAGNKIDLEKDRTVSLEDAEK 149
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+ S+G ++ TSA + GIE++FL++ + +I
Sbjct: 150 YASSVGAVHFHTSAKMNSGIEEIFLSLCRMMI 181
>gi|66807765|ref|XP_637605.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208512|sp|P34142.2|RAB21_DICDI RecName: Full=Ras-related protein Rab-21; AltName: Full=Ras-related
protein RabB
gi|60465965|gb|EAL64032.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 212
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 102/152 (67%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V RYI +F+ T A FF IN+G ++ L +WDTAGQERF ++ P+YY
Sbjct: 18 VGKTSIVFRYIDNIFNDKHLMTQHAGFFQKHINIGGKRICLTIWDTAGQERFHALGPIYY 77
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R + AL+V+DIT SF K W+KELK + + LC++GNK DLE +R + +A
Sbjct: 78 RGSQGALVVYDITDNDSFIKAKNWIKELKTMLGNDISLCIIGNKCDLEKTRVIPLADAEA 137
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+KS+G +Y TSA ++GIE++FL++++ +I
Sbjct: 138 YAKSVGAIHYSTSAKLNKGIEELFLDLTRRMI 169
>gi|195482441|ref|XP_002102048.1| GE15254 [Drosophila yakuba]
gi|194189572|gb|EDX03156.1| GE15254 [Drosophila yakuba]
Length = 222
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 114/178 (64%), Gaps = 2/178 (1%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY+ F+ T+ ASF T K+++ + + +L +WDTAGQERF ++ P+Y
Sbjct: 24 VGKTSLVLRYMEDRFNAQHLSTLQASFVTRKLSLEDGRRAQLNIWDTAGQERFHALGPIY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR ++ ALLV+DIT SF +K+WV+EL++ + L +VGNKTDLE R V +EA
Sbjct: 84 YRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRSVTHDEAL 143
Query: 236 HYSKSIGGTYYETSALQDQGIEDVF-LNVSKGLICLSQESLHTSSLRVYDSDNITSAN 292
Y++++G Y ETSA +++G+ ++F L L LSQ S LR+ SD T N
Sbjct: 144 PYARTVGAQYVETSAKENEGVAELFDLLTHLMLEQLSQRQPDASPLRLQTSDTDTFNN 201
>gi|91078236|ref|XP_966494.1| PREDICTED: similar to Ras-related small GTPase isoform 1 [Tribolium
castaneum]
gi|270003941|gb|EFA00389.1| hypothetical protein TcasGA2_TC003235 [Tribolium castaneum]
Length = 216
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 108/152 (71%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY+ F+ + T+ ASF K+N+ ++ L +WDTAGQE+F ++ P+YY
Sbjct: 22 VGKTSLVLRYVEDKFNTNHVTTVQASFLNKKLNIDGKRINLAIWDTAGQEKFHALGPIYY 81
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K+WVKEL++ + + L + GNKTDLE +R V+ EEA
Sbjct: 82 RSSNGAVLVYDITDEDSFQKVKSWVKELRKMLGADICLVIAGNKTDLEKNRNVSLEEAEA 141
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+ +G +++TSA ++G+E++FL +++ ++
Sbjct: 142 YAIKVGAIHFQTSAKLNKGVEEMFLVLTQKML 173
>gi|345320574|ref|XP_001517415.2| PREDICTED: ras-related protein Rab-21-like [Ornithorhynchus
anatinus]
Length = 184
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 97/134 (72%)
Query: 139 IGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIK 198
+ ASF T K+N+G +V L +WDTAGQERF ++ P+YYR++N A+LV+DIT SF +K
Sbjct: 12 VQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVK 71
Query: 199 TWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIED 258
WVKEL++ + + LC+VGNK DLE R V+ +EA Y++S+G +Y TSA ++GIE+
Sbjct: 72 NWVKELRKMLGNEICLCIVGNKIDLEKERHVSVQEAEAYAESVGAKHYHTSAKHNKGIEE 131
Query: 259 VFLNVSKGLICLSQ 272
+FL++ K +I +Q
Sbjct: 132 LFLDLCKRMIETAQ 145
>gi|323448788|gb|EGB04682.1| hypothetical protein AURANDRAFT_55091 [Aureococcus anophagefferens]
Length = 195
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 100/152 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+ +VVR++ F PTIGA+F T +N+ VK ++WDTAGQER+RS+APMY
Sbjct: 18 AVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQSVNLENATVKFEIWDTAGQERYRSLAPMY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SF K+WVKEL+R D +++ + GNK DL++ R V EEA
Sbjct: 78 YRGAAAAIVVYDITNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLQNKRRVESEEAK 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
YS+ G + ETSA ++D+F +++ L
Sbjct: 138 QYSEENGILHMETSAKNATHVKDLFQEIARKL 169
>gi|195432330|ref|XP_002064176.1| GK20025 [Drosophila willistoni]
gi|194160261|gb|EDW75162.1| GK20025 [Drosophila willistoni]
Length = 230
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/146 (47%), Positives = 104/146 (71%), Gaps = 3/146 (2%)
Query: 117 VGKTSMVVRYIGKMF-SHHISPTIGASFFTAKINV-GENKVKLQVWDTAGQERFRSMAPM 174
VGKTS+V+RY+ F S H+S T+ ASF T KI + E + +L +WDTAGQERF ++ P+
Sbjct: 24 VGKTSLVLRYMEDKFNSQHLS-TLQASFVTKKITLPDERRAQLNIWDTAGQERFHALGPI 82
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR ++ ALLV+DIT SF +K+WV+ELK+ + + L +VGNKTDLE R ++ E A
Sbjct: 83 YYRGSDGALLVYDITDQDSFQKVKSWVRELKQMLGSDITLIIVGNKTDLEDQRAIDYESA 142
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVF 260
Y++++G Y ETSA +++G+ ++F
Sbjct: 143 VQYARTVGAQYVETSAKENEGVTELF 168
>gi|294460994|gb|ADE76067.1| unknown [Picea sitchensis]
Length = 209
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 104/148 (70%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY+ +FS + T+ AS+ T ++N+ V L +WDTAGQERF ++ P+YY
Sbjct: 22 VGKTSLVLRYVDDVFSDSQTATVQASYLTKRLNINGVVVTLSIWDTAGQERFHALGPIYY 81
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R+A+AALLV+DI SF ++ WVKEL++ + ++L + NK+DL S++++ +EA
Sbjct: 82 RDADAALLVYDIMDKDSFTRVRNWVKELRQMASKDIILAIAANKSDLVRSQKIDLQEAER 141
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVS 264
Y+ SIG ++ TSA + GIE VFL+++
Sbjct: 142 YAASIGAKHFVTSAKLNTGIEQVFLDIT 169
>gi|223634478|gb|ACN09816.1| GH27649p [Drosophila melanogaster]
Length = 263
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 121/180 (67%), Gaps = 4/180 (2%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY+ F+ T+ ASF + K+++ + + +L +WDTAGQERF ++ P+Y
Sbjct: 65 VGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERFHALGPIY 124
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR ++ ALLV+DIT SF +K+WV+EL++ + L +VGNKTDLE R V +EA
Sbjct: 125 YRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTHDEAL 184
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI-CLSQESLHTSSLRVY--DSDNITSAN 292
Y++++G Y ETSA +++G+ ++F +++ ++ LSQ S LR+ D+DN+ +++
Sbjct: 185 QYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLSQRQPDASPLRLQNPDTDNLNNSD 244
>gi|380026323|ref|XP_003696901.1| PREDICTED: uncharacterized protein LOC100865682 isoform 2 [Apis
florea]
Length = 850
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 107/163 (65%), Gaps = 5/163 (3%)
Query: 416 NNKKKNRVATTGRPVRSRGGPDRLAINPEGVYCNARFMQAITLHIGDKVTVYTVHGKQFE 475
N+K+KNR + T R R+RG P + EGVY NA FM AIT H+G+ V + T++G +E
Sbjct: 2 NSKRKNR-SNTNRSPRARG-PQERCVAAEGVYNNAHFMHAITSHVGNIVQIQTLNGSIYE 59
Query: 476 GYLKTFSKQFELVISMTHQVDPENPQCIDPNTVVDMKIFKLDDIVRIEAKNVDLEYAVRD 535
G +TFS QF++V+ M H+V E I +VV+ IFK DI+ + AK+VDL+YA+RD
Sbjct: 60 GIFRTFSSQFDVVLEMAHRV--EGSGKISVESVVEKLIFKPQDIITMSAKDVDLDYAIRD 117
Query: 536 TFATDTAISKFNGVIGERELEPWAEDMLGPGGDDDFELDQMCN 578
TF TDT ISK+NG+IGE+ELEPW G DD +LD N
Sbjct: 118 TFRTDTVISKYNGLIGEKELEPWDAPPATMNG-DDLKLDGTTN 159
>gi|328789427|ref|XP_392675.3| PREDICTED: hypothetical protein LOC409151 [Apis mellifera]
Length = 861
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 107/163 (65%), Gaps = 5/163 (3%)
Query: 416 NNKKKNRVATTGRPVRSRGGPDRLAINPEGVYCNARFMQAITLHIGDKVTVYTVHGKQFE 475
N+K+KNR + T R R+RG P + EGVY NA FM AIT H+G+ V + T++G +E
Sbjct: 2 NSKRKNR-SNTNRSPRARG-PQERCVAAEGVYNNAHFMHAITSHVGNIVQIQTLNGSIYE 59
Query: 476 GYLKTFSKQFELVISMTHQVDPENPQCIDPNTVVDMKIFKLDDIVRIEAKNVDLEYAVRD 535
G +TFS QF++V+ M H+V E I +VV+ IFK DI+ + AK+VDL+YA+RD
Sbjct: 60 GIFRTFSSQFDVVLEMAHRV--EGSGKISVESVVEKLIFKPQDIITMSAKDVDLDYAIRD 117
Query: 536 TFATDTAISKFNGVIGERELEPWAEDMLGPGGDDDFELDQMCN 578
TF TDT ISK+NG+IGE+ELEPW G DD +LD N
Sbjct: 118 TFRTDTVISKYNGLIGEKELEPWDAPPATMNG-DDLKLDGTTN 159
>gi|380026321|ref|XP_003696900.1| PREDICTED: uncharacterized protein LOC100865682 isoform 1 [Apis
florea]
Length = 861
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 107/163 (65%), Gaps = 5/163 (3%)
Query: 416 NNKKKNRVATTGRPVRSRGGPDRLAINPEGVYCNARFMQAITLHIGDKVTVYTVHGKQFE 475
N+K+KNR + T R R+RG P + EGVY NA FM AIT H+G+ V + T++G +E
Sbjct: 2 NSKRKNR-SNTNRSPRARG-PQERCVAAEGVYNNAHFMHAITSHVGNIVQIQTLNGSIYE 59
Query: 476 GYLKTFSKQFELVISMTHQVDPENPQCIDPNTVVDMKIFKLDDIVRIEAKNVDLEYAVRD 535
G +TFS QF++V+ M H+V E I +VV+ IFK DI+ + AK+VDL+YA+RD
Sbjct: 60 GIFRTFSSQFDVVLEMAHRV--EGSGKISVESVVEKLIFKPQDIITMSAKDVDLDYAIRD 117
Query: 536 TFATDTAISKFNGVIGERELEPWAEDMLGPGGDDDFELDQMCN 578
TF TDT ISK+NG+IGE+ELEPW G DD +LD N
Sbjct: 118 TFRTDTVISKYNGLIGEKELEPWDAPPATMNG-DDLKLDGTTN 159
>gi|332018822|gb|EGI59381.1| Ataxin-2-like protein [Acromyrmex echinatior]
Length = 878
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 99/151 (65%), Gaps = 5/151 (3%)
Query: 428 RPVRSRGGPDRLAINPEGVYCNARFMQAITLHIGDKVTVYTVHGKQFEGYLKTFSKQFEL 487
R R+RG P + EGVY NA FM A+T H+G+ V + T +G +EG +TFS QF++
Sbjct: 27 RSPRARG-PQERNVAAEGVYNNAHFMHAVTSHVGNTVQIQTQNGSVYEGVFRTFSSQFDV 85
Query: 488 VISMTHQVDPENPQCIDPNTVVDMKIFKLDDIVRIEAKNVDLEYAVRDTFATDTAISKFN 547
V+ + H+V+ C+D +VV+ IFK D+V I AK+VDL+YA+RDTF TDTAISKFN
Sbjct: 86 VLELAHRVESSGKICVD--SVVEKLIFKPQDVVTISAKDVDLDYAIRDTFQTDTAISKFN 143
Query: 548 GVIGERELEPWAEDMLGPGGDDDFELDQMCN 578
G+IGE+ELEPW G D ELD N
Sbjct: 144 GLIGEKELEPWDPPTTMNGA--DLELDGAAN 172
>gi|300175460|emb|CBK20771.2| unnamed protein product [Blastocystis hominis]
Length = 196
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 99/152 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+ +VVR++ F PTIGA+F T +NV +K ++WDTAGQER+RS+APMY
Sbjct: 17 AVGKSCLVVRFVRDEFFPFQEPTIGAAFLTQTVNVDNVTIKFEIWDTAGQERYRSLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SF KTWVKEL+R D +V+ + GNK DLE +R++ REEA
Sbjct: 77 YRGAAAAIVVYDITSRESFNGAKTWVKELQRRGDPNVVIALAGNKCDLEENRQIPREEAE 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G + ETSA + ++F ++ L
Sbjct: 137 EYAVENGLLFMETSAKMALNVREIFESIGHKL 168
>gi|6324663|ref|NP_014732.1| Vps21p [Saccharomyces cerevisiae S288c]
gi|549795|sp|P36017.1|VPS21_YEAST RecName: Full=Vacuolar protein sorting-associated protein 21;
AltName: Full=GTP-binding protein YPT51; AltName:
Full=Vacuolar protein-targeting protein 12
gi|441477|emb|CAA82543.1| VPS21 product [Saccharomyces cerevisiae]
gi|483567|emb|CAA53769.1| ypt51p [Saccharomyces cerevisiae]
gi|1164935|emb|CAA64010.1| YOR3154c [Saccharomyces cerevisiae]
gi|1420257|emb|CAA99285.1| VPS21 [Saccharomyces cerevisiae]
gi|151945713|gb|EDN63954.1| small GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190407421|gb|EDV10688.1| vacuolar protein sorting-associated protein 21 [Saccharomyces
cerevisiae RM11-1a]
gi|207341191|gb|EDZ69312.1| YOR089Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272985|gb|EEU07949.1| Vps21p [Saccharomyces cerevisiae JAY291]
gi|259149571|emb|CAY86375.1| Vps21p [Saccharomyces cerevisiae EC1118]
gi|285814973|tpg|DAA10866.1| TPA: Vps21p [Saccharomyces cerevisiae S288c]
gi|323302866|gb|EGA56670.1| Vps21p [Saccharomyces cerevisiae FostersB]
gi|323307162|gb|EGA60445.1| Vps21p [Saccharomyces cerevisiae FostersO]
gi|323331470|gb|EGA72885.1| Vps21p [Saccharomyces cerevisiae AWRI796]
gi|323335502|gb|EGA76787.1| Vps21p [Saccharomyces cerevisiae Vin13]
gi|323346523|gb|EGA80810.1| Vps21p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352075|gb|EGA84612.1| Vps21p [Saccharomyces cerevisiae VL3]
gi|349581251|dbj|GAA26409.1| K7_Vps21p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763044|gb|EHN04575.1| Vps21p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296418|gb|EIW07520.1| Vps21p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 210
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 109/167 (65%), Gaps = 3/167 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F+ + PTIGA+F T ++ + E+ VK ++WDTAGQERF S+APMY
Sbjct: 17 AVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL---ESSREVNRE 232
YRNA AAL+V+D+T+ SF + WVKEL + +++ +VGNK D+ R+V RE
Sbjct: 77 YRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEGGERKVARE 136
Query: 233 EAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSS 279
E ++ G ++ETSA + + DVFL + + + + E +++S
Sbjct: 137 EGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIPLKTAEEQNSAS 183
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F+ + PTIGA+F T ++ + E+ VK ++
Sbjct: 17 AVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEI 60
>gi|307190847|gb|EFN74693.1| Ras-related protein Rab-21 [Camponotus floridanus]
Length = 224
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 107/164 (65%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+ +RY+ F+ T+ ASF K+N+ +V L +WDTAGQE+F ++ P+YY
Sbjct: 23 VGKTSVALRYVEDKFNDKHITTLQASFLNKKLNINGKRVNLAIWDTAGQEKFHALGPIYY 82
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R +N A+LV+DIT +F +K WVKELK+ + + L + GNK DLE R V +EA
Sbjct: 83 RMSNGAILVYDITDEDTFQKVKNWVKELKKMLGSEICLVIAGNKVDLEKDRNVAIDEAEE 142
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSL 280
Y+K +G ++ TSA +Q IE++FL++++ ++ + E+ S+L
Sbjct: 143 YAKQVGAMHFHTSAKLNQNIEEMFLDLTRRMMERADEAEQKSTL 186
>gi|168028226|ref|XP_001766629.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682061|gb|EDQ68482.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
Length = 222
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 105/149 (70%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+ +RY+ +FS + TI AS+ T ++ V V L +WDTAGQERF ++ P+YY
Sbjct: 32 VGKTSLTLRYVNNIFSEKQTATIQASYLTKRLVVDGQAVNLCIWDTAGQERFHALGPIYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R+A+AALLV+D+ SF +++WV+ELK+ + +VL + GNK+D++ R+VN E++
Sbjct: 92 RDADAALLVYDLLDKDSFDRVQSWVRELKKMASKKIVLAIAGNKSDMDKLRQVNMEDSVK 151
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++ IG ++ TSA + GIE+ F+++++
Sbjct: 152 YAELIGAKHFVTSAKLNTGIEEAFMDIAR 180
>gi|219111761|ref|XP_002177632.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410517|gb|EEC50446.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 201
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 101/152 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+ +VVR++ F PTIGA+F T + + + VK ++WDTAGQER+RS+APMY
Sbjct: 25 AVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVQLDDATVKFEIWDTAGQERYRSLAPMY 84
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A+AA++V+DIT SF K+WVKEL+R D +V+ + GNK DLE+ R V EEA
Sbjct: 85 YRGASAAIVVYDITNPDSFTGAKSWVKELQRRGDPNVVIALAGNKADLETRRAVEFEEAN 144
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA ++ +F+ ++K L
Sbjct: 145 AYAQENGILHLETSAKNANNVKSLFIEIAKTL 176
>gi|427786891|gb|JAA58897.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 218
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 98/151 (64%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +F KTWVKEL+R +V+ + GNK DL S R V EEA
Sbjct: 92 RGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPSIVIALAGNKADLASKRAVELEEAQA 151
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
YS+ G + ETSA + D+FL ++K L
Sbjct: 152 YSEENGLLFMETSAKTAMNVNDIFLAIAKKL 182
>gi|328872078|gb|EGG20448.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 212
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 101/152 (66%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RYI F T A FF IN+ +V L +WDTAGQERF ++ P+YY
Sbjct: 18 VGKTSIVLRYIQNTFVDKHVMTQHAGFFQKNINIAGKRVGLTIWDTAGQERFHALGPIYY 77
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R + A++V+DIT S+ K W+KELK + +VLC++GNK DLE SR + EE+
Sbjct: 78 RGSQGAIVVYDITDADSYTKAKNWIKELKAMLGNDIVLCLIGNKCDLEKSRVITLEESEA 137
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+ S+G +Y TSA ++G+E++FL+++K ++
Sbjct: 138 YAASVGAKHYGTSAKLNKGVEELFLDLTKRML 169
>gi|170031849|ref|XP_001843796.1| rab5 [Culex quinquefasciatus]
gi|167871195|gb|EDS34578.1| rab5 [Culex quinquefasciatus]
Length = 215
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 99/152 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 35 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCIDDTTVKFEIWDTAGQERYHSLAPMY 94
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DI SFA KTWVKEL+R +V+ + GNK DL +SR V+ EEA
Sbjct: 95 YRGAQAAIVVYDIQNQDSFARAKTWVKELQRQASPNIVIALAGNKADLANSRVVDYEEAK 154
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G + ETSA + D+FL ++K L
Sbjct: 155 QYADDNGLLFMETSAKTAVNVNDIFLAIAKKL 186
>gi|357612151|gb|EHJ67842.1| Ras-related small GTPase [Danaus plexippus]
Length = 208
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 101/149 (67%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+++RYI ++ T+ A+F K+N+ ++ L +WDTAGQE+F ++ P+YY
Sbjct: 21 VGKTSLLLRYIEDKYNDKHLTTLQATFLNKKLNINGKRINLSIWDTAGQEKFHALGPIYY 80
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
RN+N A+LV+DIT SF +K WVKEL++ + +VL + GNK DLE R V EEA
Sbjct: 81 RNSNGAILVYDITDEDSFGKVKNWVKELRKMLGSDIVLVIAGNKIDLEQDRTVPLEEAES 140
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ +G ++ TSA +QG+E++FL +++
Sbjct: 141 YAVMVGARHFNTSAKMNQGVEELFLELTR 169
>gi|225445266|ref|XP_002284542.1| PREDICTED: ras-related protein RHN1 isoform 1 [Vitis vinifera]
gi|359484588|ref|XP_003633124.1| PREDICTED: ras-related protein RHN1 isoform 2 [Vitis vinifera]
gi|297738837|emb|CBI28082.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 101/153 (66%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GKTS+V+R++ F TIGA+FFT +++ E +K +WDTAGQER+ S+APM
Sbjct: 19 MGTGKTSLVLRFVKGQFYDFQESTIGAAFFTQVLSLNEATIKFDIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL+R + L++ +V NK DLE+ REV E+
Sbjct: 79 YYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLLMILVANKADLETKREVENEKG 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+K G ++ETSA Q + ++F ++K L
Sbjct: 139 EQYAKENGLLFFETSAKTAQNVNELFYEIAKNL 171
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL--RTGLKVSKIPVPT 396
+G GKTS+V+R++ F TIGA+FFT +++ E +K + G + P
Sbjct: 19 MGTGKTSLVLRFVKGQFYDFQESTIGAAFFTQVLSLNEATIKFDIWDTAGQERYHSLAPM 78
Query: 397 RNREGATTGRITEPDTMNNNNKKKNRVATTGRPVRSRGGPDRLAI 441
R A + + +M++ + K V + ++ +G P+ L I
Sbjct: 79 YYRGAAAAVVVYDITSMDSFERAKKWV----QELQRQGNPNLLMI 119
>gi|195355659|ref|XP_002044308.1| GM10050 [Drosophila sechellia]
gi|194129619|gb|EDW51662.1| GM10050 [Drosophila sechellia]
Length = 224
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 117/169 (69%), Gaps = 4/169 (2%)
Query: 117 VGKTSMVVRYIGKMF-SHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGKTS+V+RY+ F S H+S T+ ASF + K+++ + + +L +WDTAGQERF ++ P+
Sbjct: 24 VGKTSLVLRYMEDRFNSQHLS-TLQASFVSRKVSLEDGRRAQLNIWDTAGQERFHALGPI 82
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR ++ ALLV+DIT SF +K+WV+EL++ + L +VGNKTDLE R V +++A
Sbjct: 83 YYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEQQRAVTQDDA 142
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI-CLSQESLHTSSLRV 282
Y++++G Y ETSA +++G+ ++F +++ ++ LSQ S LR+
Sbjct: 143 LQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLSQRQPDASPLRL 191
>gi|410083613|ref|XP_003959384.1| hypothetical protein KAFR_0J01850 [Kazachstania africana CBS 2517]
gi|372465975|emb|CCF60249.1| hypothetical protein KAFR_0J01850 [Kazachstania africana CBS 2517]
Length = 209
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 106/156 (67%), Gaps = 4/156 (2%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ FS + PTIGA+F T ++N+ N +K ++WDTAGQERF S+APMY
Sbjct: 17 AVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNINNNTIKFEIWDTAGQERFASLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVNR 231
YRNA AAL+V+DIT+ SF + WVKEL + +++ +VGNK D+ ES R+V R
Sbjct: 77 YRNAQAALVVYDITKPQSFIKARHWVKELHEQASKDIIIALVGNKVDIIENDESERKVAR 136
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
EE ++ G ++ETSA + + DVFLN+ + +
Sbjct: 137 EEGERLAEEEGLIFFETSAKTAENVNDVFLNIGEKI 172
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ FS + PTIGA+F T ++N+ N +K ++
Sbjct: 17 AVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNINNNTIKFEI 60
>gi|401623607|gb|EJS41700.1| vps21p [Saccharomyces arboricola H-6]
Length = 210
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 102/153 (66%), Gaps = 3/153 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F+ + PTIGA+F T ++ + E+ VK ++WDTAGQERF S+APMY
Sbjct: 17 AVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL---ESSREVNRE 232
YRNA AAL+V+D+T+ SF + WVKEL + +++ +VGNK D+ R+V RE
Sbjct: 77 YRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKVDMLQEGGERKVARE 136
Query: 233 EAFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
E ++ G ++ETSA + + DVFL + +
Sbjct: 137 EGEKLAEEKGLLFFETSAKTGENVNDVFLGIGE 169
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F+ + PTIGA+F T ++ + E+ VK ++
Sbjct: 17 AVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEI 60
>gi|115463295|ref|NP_001055247.1| Os05g0341600 [Oryza sativa Japonica Group]
gi|54291745|gb|AAV32114.1| unknown protein [Oryza sativa Japonica Group]
gi|113578798|dbj|BAF17161.1| Os05g0341600 [Oryza sativa Japonica Group]
gi|215767010|dbj|BAG99238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222631179|gb|EEE63311.1| hypothetical protein OsJ_18122 [Oryza sativa Japonica Group]
Length = 212
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 121/194 (62%), Gaps = 11/194 (5%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY+ +FS T+ AS+ T ++ V + L +WDTAGQE+F ++ P+YY
Sbjct: 25 VGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPITLSIWDTAGQEKFHALGPIYY 84
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R+A+AALLV+DIT +F + WVKELK+ ++ +V+ + NK+DL S+ ++ EA
Sbjct: 85 RDADAALLVYDITDNDTFLRVTKWVKELKQMANKDIVMAIAANKSDLVRSKHIDTNEAAS 144
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP-RG 295
Y++SIG T + TSA GI+D+F +++K L+ + S SD ++ A+P +G
Sbjct: 145 YAESIGATLFVTSAKAGTGIDDIFSDIAKRLLERRKNS----------SDGLSLAHPKKG 194
Query: 296 VVEITPLSSLDTPP 309
++ + + PP
Sbjct: 195 ILIVDDEPEKEPPP 208
>gi|328855808|gb|EGG04932.1| hypothetical protein MELLADRAFT_88361 [Melampsora larici-populina
98AG31]
Length = 516
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 110/182 (60%), Gaps = 24/182 (13%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+V RY FS+ ++ TIGASF T K++V KV+LQ+WDTAGQERFRSMAPMY
Sbjct: 296 GVGKTSIVHRYTTGSFSYSLASTIGASFCTKKLSVDGCKVRLQIWDTAGQERFRSMAPMY 355
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSR-----EVN 230
YR ANAA+LV+DIT SF I+ W+ EL N+ LV+ +VG+K DL + + EV
Sbjct: 356 YRGANAAILVYDITNQSSFEDIQNWLHELSANMSPELVIQIVGSKADLATDKRSVELEVA 415
Query: 231 REEAFHYSKSIGGTYY-------------------ETSALQDQGIEDVFLNVSKGLICLS 271
++ +++S T + E SA D GIED+FL V++ L+
Sbjct: 416 YQQILEWTESFPFTNHAQSNSRGEVGHSWPDLAITEVSAKDDFGIEDMFLVVTRRLVMRK 475
Query: 272 QE 273
E
Sbjct: 476 AE 477
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS+V RY FS+ ++ TIGASF T K++V KV+LQ+
Sbjct: 296 GVGKTSIVHRYTTGSFSYSLASTIGASFCTKKLSVDGCKVRLQI 339
>gi|340380299|ref|XP_003388660.1| PREDICTED: ras-related protein Rab-22A-like [Amphimedon
queenslandica]
Length = 163
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+GVGKTS+V R++ FS +I+ T+GASF + + V + +K Q+WDTAGQER+RS+ PM
Sbjct: 14 VGVGKTSLVGRFVHDTFSQNITTTLGASFMSKSLTVDNSTIKFQIWDTAGQERYRSLLPM 73
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYRNA AA++V+DIT SF ++ W+ EL R +VL + GNK DLE RE+N+
Sbjct: 74 YYRNAAAAIVVYDITNEGSFTVLQDWIAELHRLGPPNIVLAIAGNKCDLEDKRELNKVRL 133
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ + + ETSAL + +E++F+ +S+
Sbjct: 134 I-YASEVNAIFGETSALTARNVEEMFIEISE 163
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
+GVGKTS+V R++ FS +I+ T+GASF + + V + +K Q+
Sbjct: 14 VGVGKTSLVGRFVHDTFSQNITTTLGASFMSKSLTVDNSTIKFQI 58
>gi|50411080|ref|XP_457015.1| DEHA2B01144p [Debaryomyces hansenii CBS767]
gi|49652680|emb|CAG85000.1| DEHA2B01144p [Debaryomyces hansenii CBS767]
Length = 224
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 99/159 (62%), Gaps = 7/159 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK--VKLQVWDTAGQERFRSMAP 173
VGK+S+V R++ F + TIGA+F T I + EN VK ++WDTAGQER++S+AP
Sbjct: 26 AVGKSSIVHRFVKNTFDNMRESTIGAAFLTQSITLPENNTTVKFEIWDTAGQERYKSLAP 85
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNANAAL V+DIT SF + W+KELK+ E +V+C+VGNK DLE +REV+ E
Sbjct: 86 MYYRNANAALCVYDITSRSSFTKAQDWIKELKKQAPEGIVICLVGNKADLEENREVDERE 145
Query: 234 AFHYSKSIGG-----TYYETSALQDQGIEDVFLNVSKGL 267
Y + E SA G+ D+F V++ L
Sbjct: 146 VSQYIDELNQEDNKMVAAECSAKSGDGVVDIFTKVARAL 184
>gi|255718227|ref|XP_002555394.1| KLTH0G08206p [Lachancea thermotolerans]
gi|238936778|emb|CAR24957.1| KLTH0G08206p [Lachancea thermotolerans CBS 6340]
Length = 212
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 106/155 (68%), Gaps = 3/155 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F+ + PTIGA+F T ++N+G++ +K ++WDTAGQERF S+APMY
Sbjct: 17 AVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVNMGDHTIKFEIWDTAGQERFASLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL---ESSREVNRE 232
YRNA AAL+V+D+T+ SF + WVKEL+ + +++ +VGNK D+ + R+V E
Sbjct: 77 YRNAQAALVVYDVTKPQSFIKARHWVKELREQASKDIIIALVGNKLDMVETGAERKVALE 136
Query: 233 EAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
EA + + G ++ETSA + +VFL + + +
Sbjct: 137 EAENLASQEGLLFFETSAKTGSNVNEVFLAIGQKI 171
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 33/44 (75%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F+ + PTIGA+F T ++N+G++ +K ++
Sbjct: 17 AVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVNMGDHTIKFEI 60
>gi|125551885|gb|EAY97594.1| hypothetical protein OsI_19520 [Oryza sativa Indica Group]
Length = 210
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 121/194 (62%), Gaps = 11/194 (5%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY+ +FS T+ AS+ T ++ V + L +WDTAGQE+F ++ P+YY
Sbjct: 23 VGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPITLSIWDTAGQEKFHALGPIYY 82
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R+A+AALLV+DIT +F + WVKELK+ ++ +V+ + NK+DL S+ ++ EA
Sbjct: 83 RDADAALLVYDITDNDTFLRVTKWVKELKQMANKDIVMAIAANKSDLVRSKHIDTNEAAS 142
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP-RG 295
Y++SIG T + TSA GI+D+F +++K L+ + S SD ++ A+P +G
Sbjct: 143 YAESIGATLFVTSAKAGTGIDDIFSDIAKRLLEKRKNS----------SDGLSLAHPKKG 192
Query: 296 VVEITPLSSLDTPP 309
++ + + PP
Sbjct: 193 ILIVDDEPEKEPPP 206
>gi|168021891|ref|XP_001763474.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
gi|162685267|gb|EDQ71663.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
Length = 208
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 118/193 (61%), Gaps = 9/193 (4%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+ +RY+ +FS TI ASF T ++ V V L +WDTAGQERF ++ P+YY
Sbjct: 19 VGKTSLALRYVHNVFSEKQMATIQASFLTKRLTVDGQVVSLCIWDTAGQERFHALGPIYY 78
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R+A+AALLV+D+ SF +++WV+ELK+ + +VL + GNK+D+ S N ++A
Sbjct: 79 RDADAALLVYDLLDKDSFDRVQSWVRELKKMASKNIVLSIAGNKSDMAKSLHGNMQDAEM 138
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPRGV 296
Y++SIG T++ TSA + GIE+ F+++++ + + Q + DN S R
Sbjct: 139 YAESIGATHFVTSAKLNAGIEETFMDIARRV--MQQRAAE-------GIDNPASGPRRKS 189
Query: 297 VEITPLSSLDTPP 309
V I + +TPP
Sbjct: 190 VVIADKETANTPP 202
>gi|54399922|gb|AAV34202.1| Rab5 protein [Aiptasia pulchella]
Length = 215
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 99/152 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F KTWVKEL+R +V+ + GNK DL S R V+ EEA
Sbjct: 90 YRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPNIVIALSGNKADLSSKRMVDYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+FL ++K L
Sbjct: 150 TYAEENGLLFMETSAKTAMNVNDIFLAIAKKL 181
>gi|195131053|ref|XP_002009965.1| GI14949 [Drosophila mojavensis]
gi|193908415|gb|EDW07282.1| GI14949 [Drosophila mojavensis]
Length = 222
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 117/180 (65%), Gaps = 3/180 (1%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-GENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY+ F+ T+ ASF T K+ + E + +L +WDTAGQERF ++ P+Y
Sbjct: 24 VGKTSLVLRYMEDKFNTQHLSTLQASFVTKKVTLPDERRAQLNIWDTAGQERFHALGPIY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR ++ ALLV+DIT SF +K+WV+ELK+ + L +VGNKTDLE R ++ E A
Sbjct: 84 YRGSDGALLVYDITDQDSFQKVKSWVRELKQMRGSEIALIIVGNKTDLEEQRAISYETAL 143
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICL--SQESLHTSSLRVYDSDNITSANP 293
Y++++G Y ETSA ++ G+ ++F +++ ++ S++ T++LR+ +S + P
Sbjct: 144 RYAQTVGAQYVETSAKENDGVNELFELLTQLMVAHHGSKQQNDTNALRLQNSISEAGVEP 203
>gi|308805074|ref|XP_003079849.1| GTPase Rab5/YPT51 and related small G protein superfamily GTPases
(ISS) [Ostreococcus tauri]
gi|116058306|emb|CAL53495.1| GTPase Rab5/YPT51 and related small G protein superfamily GTPases
(ISS) [Ostreococcus tauri]
Length = 221
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 102/152 (67%), Gaps = 1/152 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-GENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS++VR++ F +PT+ AS+ T + + + + L VWDTAGQERF ++ P+Y
Sbjct: 30 VGKTSLLVRFVQSTFDESQAPTVRASYLTKTVRLESDARATLNVWDTAGQERFHALGPIY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+A+AA++V+DIT SF K WVKEL+R + + V NK+DLE +R V+ ++
Sbjct: 90 YRDADAAIVVYDITDADSFERAKAWVKELRRIAGAEISIAVCANKSDLERARRVSNDDGE 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+K IG +++ TSA D+G+E F++V++ L
Sbjct: 150 AYAKGIGASFHSTSAKTDKGVEQAFMSVARAL 181
>gi|325180967|emb|CCA15376.1| Rab5 family GTPase putative [Albugo laibachii Nc14]
Length = 196
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPM 174
VGK+ +VVR++ F PTIGA+F T +N+ + VK ++WDTAGQER+RS+APM
Sbjct: 18 AVGKSCLVVRFVRDEFYEFQEPTIGAAFLTQTVNLSDGCAVKFEIWDTAGQERYRSLAPM 77
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+D+T SF K+WVKEL+R D +V+ + GNK DLE+ R V EEA
Sbjct: 78 YYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDSNVVIALAGNKADLETRRAVTLEEA 137
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA ++++F+ ++ L
Sbjct: 138 RQYAEDNGILHLETSAKTSANVKNLFVAIATNL 170
>gi|406604593|emb|CCH43933.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 239
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 104/158 (65%), Gaps = 1/158 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V R++ F TIGA+F T I + + +K ++WDTAGQER++S+APM
Sbjct: 55 AVGKSSVVHRFVKDSFDDFRESTIGAAFLTQTIQLDDTTTIKFEIWDTAGQERYKSLAPM 114
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYRNANAA++V+DITQ S K W KEL+R ++ +V+ + GNK DLES R+V +E A
Sbjct: 115 YYRNANAAIVVYDITQESSLERAKAWTKELQRQANQDIVIALAGNKVDLESQRQVPKEIA 174
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
++ G ++E SA +GI+++F +++ L SQ
Sbjct: 175 ETFASEEGLLFFEVSAKSGEGIKEIFTKIAEKLPLESQ 212
>gi|323456390|gb|EGB12257.1| hypothetical protein AURANDRAFT_70056 [Aureococcus anophagefferens]
Length = 221
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 112/165 (67%), Gaps = 3/165 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGE-NKVKLQVWDTAGQERFRSMAPM 174
GVGKT +V+R+I +++ TIGA F T KI + + K+Q+WDTAGQERFR+MAPM
Sbjct: 20 GVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTAQGDACKIQIWDTAGQERFRAMAPM 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRN-VDEPLVLCVVGNKTDLESSREVNREE 233
YYRNA AA++ FD+T +F +K WV+ELK N VD+ LV+ + NK DL+ +R+V+R
Sbjct: 80 YYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLD-TRQVSRAR 138
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTS 278
A +++SI +TSA ++ G+ ++F VS+ +I L + L ++
Sbjct: 139 AEQFARSISAIVLDTSAKENFGVAELFAAVSEHVIKLRGQELCST 183
>gi|195393122|ref|XP_002055203.1| GJ18919 [Drosophila virilis]
gi|194149713|gb|EDW65404.1| GJ18919 [Drosophila virilis]
Length = 229
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 116/172 (67%), Gaps = 3/172 (1%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-GENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY+ F+ T+ ASF T K+ + E + +L +WDTAGQERF ++ P+Y
Sbjct: 24 VGKTSLVLRYMEDKFNTQHLSTLQASFVTKKVTLPDEQRAQLNIWDTAGQERFHALGPIY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR ++ ALLV+DIT SF +K+WV+ELK+ + L +VGNKTDLE R ++ E A
Sbjct: 84 YRGSDGALLVYDITDQDSFQKVKSWVRELKQMRGSEIALIIVGNKTDLEDQRAISYETAL 143
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI--CLSQESLHTSSLRVYDS 285
Y++++G Y ETSA +++G+ ++F +++ ++ S++ T++LR+ +S
Sbjct: 144 RYAQTVGAQYVETSAKENEGVNELFELLTQLMVEHYGSKQQSDTNALRLQNS 195
>gi|315434208|ref|NP_001186777.1| ras-related protein Rab-5B [Gallus gallus]
gi|326935660|ref|XP_003213886.1| PREDICTED: ras-related protein Rab-5B-like [Meleagris gallopavo]
gi|75571188|sp|Q5ZHW4.1|RAB5B_CHICK RecName: Full=Ras-related protein Rab-5B
gi|53136700|emb|CAG32679.1| hypothetical protein RCJMB04_32j11 [Gallus gallus]
Length = 215
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL S R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLASKRMVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>gi|422294642|gb|EKU21942.1| Ras-related protein Rab-5C, partial [Nannochloropsis gaditana
CCMP526]
Length = 261
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 106/153 (69%), Gaps = 1/153 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+ +VVR++ F + PTIGA+F T + + ++ VK ++WDTAGQER+RS+APMY
Sbjct: 84 AVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDSTVKFEIWDTAGQERYRSLAPMY 143
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS-REVNREEA 234
YR A+AA++V+DIT SF K+WVKEL+R D +++ + GNK DL + R+V+ ++A
Sbjct: 144 YRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADLAGTRRKVDLKDA 203
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G ++ETSA Q ++ +F+ ++K L
Sbjct: 204 EEYARENGLLHFETSAKDAQNVKTLFVEIAKRL 236
>gi|56118785|ref|NP_991282.2| ras-related protein Rab-22A [Danio rerio]
gi|55250250|gb|AAH85393.1| RAB22A, member RAS oncogene family [Danio rerio]
gi|182889502|gb|AAI65262.1| Rab22a protein [Danio rerio]
Length = 196
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 103/158 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKEL+++ +V+ + GNK DL +REV+ ++A
Sbjct: 75 YRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDAREVSEKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQE 273
Y+ SI + ETSA I +VF +S+ + L E
Sbjct: 135 DYADSIHAIFIETSAKNAININEVFTQISERIPVLDAE 172
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKIN 373
GVGK+S+V R++ F +I+PTIGASF T +
Sbjct: 15 GVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQ 48
>gi|37681919|gb|AAQ97837.1| RAB22A, member RAS oncogene family [Danio rerio]
Length = 196
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 103/158 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKEL+++ +V+ + GNK DL +REV+ ++A
Sbjct: 75 YRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDAREVSEKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQE 273
Y+ SI + ETSA I +VF +S+ + L E
Sbjct: 135 DYADSIHAIFIETSAKNAININEVFTQISERIPVLDAE 172
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKIN 373
GVGK+S+V R++ F +I+PTIGASF T +
Sbjct: 15 GVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQ 48
>gi|291232375|ref|XP_002736136.1| PREDICTED: RAS-related protein RAB-22A-like [Saccoglossus
kowalevskii]
Length = 178
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 93/135 (68%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F+ H PTIGASF + + V + K Q+WDTAGQE++R +APMY
Sbjct: 15 GVGKSSLVQRFVSDTFNTHSQPTIGASFMSKTLVVDDQSYKFQIWDTAGQEKYRGLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT+ SF+A+K WV+EL++ +VL + GNK DL REV +EA
Sbjct: 75 YRGAAAAIIVYDITRESSFSAVKMWVRELEQYGPGDVVLAIAGNKADLVDQREVTYDEAH 134
Query: 236 HYSKSIGGTYYETSA 250
Y+ I T+ ETSA
Sbjct: 135 KYADQINATFVETSA 149
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK+S+V R++ F+ H PTIGASF + + V + K Q+
Sbjct: 15 GVGKSSLVQRFVSDTFNTHSQPTIGASFMSKTLVVDDQSYKFQI 58
>gi|321262867|ref|XP_003196152.1| GTPase [Cryptococcus gattii WM276]
gi|317462627|gb|ADV24365.1| GTPase, putative [Cryptococcus gattii WM276]
Length = 199
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 109/153 (71%), Gaps = 3/153 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ FS TI A+F T +N+ E+ +K ++WDTAGQER++S+AP+
Sbjct: 16 AVGKSSLVLRFVRNEFSDFRESTI-AAFLTQSVNLDESTTIKFEIWDTAGQERYKSLAPI 74
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
Y+RN+NAA++V+DITQ SF K+WV+EL+R D +V+ +VGNKTD++S R+ +RE
Sbjct: 75 YFRNSNAAVIVYDITQ-TSFEKAKSWVRELQRQADPSIVIMLVGNKTDMDSQRKTSREIG 133
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+K G + E SA +G+E++F+ ++K L
Sbjct: 134 EQYAKEEGLLFAEASAKTGEGVEELFMEIAKKL 166
>gi|254580657|ref|XP_002496314.1| ZYRO0C15554p [Zygosaccharomyces rouxii]
gi|238939205|emb|CAR27381.1| ZYRO0C15554p [Zygosaccharomyces rouxii]
Length = 211
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 115/181 (63%), Gaps = 5/181 (2%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ FS + PTIGA+F T ++N+GE VK ++WDTAGQERF S+APMYY
Sbjct: 18 VGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNIGEQTVKFEIWDTAGQERFASLAPMYY 77
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL---ESSREVNREE 233
RNA AAL+V+DIT+ SF + WVKEL + +V+ +VGNK D+ R+V +EE
Sbjct: 78 RNAQAALVVYDITKPQSFIKARHWVKELHEQASKGIVIALVGNKLDMIENGGERKVAKEE 137
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICL--SQESLHTSSLRVYDSDNITSA 291
A ++ G ++ETSA + + +VFL + + + +++ S LR+ D +
Sbjct: 138 AEKLAEEEGLLFFETSAKSGENVNEVFLGIGEKIPIKKPGEQANEQSGLRITDDQRVDLT 197
Query: 292 N 292
N
Sbjct: 198 N 198
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ FS + PTIGA+F T ++N+GE VK ++
Sbjct: 18 VGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNIGEQTVKFEI 60
>gi|156407426|ref|XP_001641545.1| predicted protein [Nematostella vectensis]
gi|156228684|gb|EDO49482.1| predicted protein [Nematostella vectensis]
Length = 216
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 99/151 (65%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL S R V E+A
Sbjct: 92 RGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALSGNKADLASKRMVEYEDAQS 151
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+FL ++K L
Sbjct: 152 YAEDNGLLFMETSAKTAMNVNDIFLAIAKKL 182
>gi|340376053|ref|XP_003386548.1| PREDICTED: ras-related protein Rab-21-like [Amphimedon
queenslandica]
Length = 222
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 107/152 (70%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY+ F+ T+ ASF + + ++ L +WDTAGQER+ ++ P+YY
Sbjct: 23 VGKTSIVLRYVQNQFNDKHIQTLQASFLQKNLTINRRRLCLNIWDTAGQERYHALGPIYY 82
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R+++AA++V+DIT SF K WV+EL++ + + VL +VGNK+DLE ++ + ++A
Sbjct: 83 RDSHAAIVVYDITDEDSFTKAKNWVRELRKMLGDSCVLVIVGNKSDLEKNKVIQEKDAQE 142
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+ S+G ++ TSA Q++GIE++FL++SK L+
Sbjct: 143 YAASVGAKHFYTSAKQNKGIEEMFLDLSKRLL 174
>gi|387861356|gb|AFK08607.1| Rab GTPase [Litopenaeus vannamei]
Length = 210
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 109/185 (58%), Gaps = 15/185 (8%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 28 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 87
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 88 YRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPNIVIALAGNKADLANKRMVEYEEAQ 147
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPRG 295
Y++ + ETSA + D+FL ++K ++ SD+ S +PRG
Sbjct: 148 TYAEENSLLFMETSAKTAMNVNDIFLAIAK---------------KLPKSDSTASGSPRG 192
Query: 296 VVEIT 300
V ++
Sbjct: 193 DVSLS 197
>gi|347841938|emb|CCD56510.1| similar to ras-related protein rab-5a [Botryotinia fuckeliana]
Length = 221
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 105/157 (66%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 28 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 87
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +++ + GNK DL R +
Sbjct: 88 YYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLDLVTEQPDKRAIT 147
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
E+A +Y+K G ++ETSA + + ++F ++K L
Sbjct: 148 TEDASNYAKEAGLLFFETSAKTSENVRELFTAIAKKL 184
>gi|432858229|ref|XP_004068856.1| PREDICTED: ras-related protein Rab-22A-like [Oryzias latipes]
Length = 194
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKTSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKEL+++ +V+ + GNK DL +REV+ ++A
Sbjct: 75 YRGSAAAVIVYDITKEDSFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDAREVSEKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++SI + ETSA I +VF +SK
Sbjct: 135 DYAESIHAIFVETSAKNAININEVFTEISK 164
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKI 372
GVGKTS+V R++ F +I+PTIGASF T +
Sbjct: 15 GVGKTSIVWRFVEDSFDPNINPTIGASFMTKTV 47
>gi|145347543|ref|XP_001418223.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578452|gb|ABO96516.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 214
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 104/152 (68%), Gaps = 1/152 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-GENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+++RY+ FS +PT+ A++ + ++ + + L VWDTAGQERF ++ P+Y
Sbjct: 21 VGKTSLLLRYVENTFSETQTPTVQATYLSKRVALENDGAATLNVWDTAGQERFHALGPIY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+A+AA+LV+DIT SF +K+WVKEL++ + L V NK+DLE +R+V++ +
Sbjct: 81 YRDADAAVLVYDITDSDSFDRVKSWVKELRQIAGSEISLAVCANKSDLERARKVSQSDGE 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+KSIG ++ TSA D+G+ F++V+ L
Sbjct: 141 TYAKSIGAAFFSTSAKADKGVAQAFMSVATAL 172
>gi|350415711|ref|XP_003490725.1| PREDICTED: hypothetical protein LOC100740024 isoform 1 [Bombus
impatiens]
Length = 858
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 107/163 (65%), Gaps = 5/163 (3%)
Query: 416 NNKKKNRVATTGRPVRSRGGPDRLAINPEGVYCNARFMQAITLHIGDKVTVYTVHGKQFE 475
N+K+KNR + T R R+RG P + EGVY NA FM AIT H+G+ V + T++G +E
Sbjct: 2 NSKRKNR-SNTNRSPRARG-PQERCVAAEGVYNNAHFMHAITSHVGNVVQIQTLNGSMYE 59
Query: 476 GYLKTFSKQFELVISMTHQVDPENPQCIDPNTVVDMKIFKLDDIVRIEAKNVDLEYAVRD 535
G +TFS QF++V+ M H+V+ ++ +VV+ IFK DI+ + AK++DL+YA RD
Sbjct: 60 GIFRTFSSQFDVVLEMAHRVEVTGKFSVE--SVVEKLIFKPQDIITMSAKDIDLDYATRD 117
Query: 536 TFATDTAISKFNGVIGERELEPWAEDMLGPGGDDDFELDQMCN 578
F TDT+ISK+NGV+GE+ELEPW G DD +LD N
Sbjct: 118 GFRTDTSISKYNGVVGEKELEPWDAPPATMNG-DDLKLDGTTN 159
>gi|350415714|ref|XP_003490726.1| PREDICTED: hypothetical protein LOC100740024 isoform 2 [Bombus
impatiens]
Length = 846
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 107/163 (65%), Gaps = 5/163 (3%)
Query: 416 NNKKKNRVATTGRPVRSRGGPDRLAINPEGVYCNARFMQAITLHIGDKVTVYTVHGKQFE 475
N+K+KNR + T R R+RG P + EGVY NA FM AIT H+G+ V + T++G +E
Sbjct: 2 NSKRKNR-SNTNRSPRARG-PQERCVAAEGVYNNAHFMHAITSHVGNVVQIQTLNGSMYE 59
Query: 476 GYLKTFSKQFELVISMTHQVDPENPQCIDPNTVVDMKIFKLDDIVRIEAKNVDLEYAVRD 535
G +TFS QF++V+ M H+V+ ++ +VV+ IFK DI+ + AK++DL+YA RD
Sbjct: 60 GIFRTFSSQFDVVLEMAHRVEVTGKFSVE--SVVEKLIFKPQDIITMSAKDIDLDYATRD 117
Query: 536 TFATDTAISKFNGVIGERELEPWAEDMLGPGGDDDFELDQMCN 578
F TDT+ISK+NGV+GE+ELEPW G DD +LD N
Sbjct: 118 GFRTDTSISKYNGVVGEKELEPWDAPPATMNG-DDLKLDGTTN 159
>gi|393246972|gb|EJD54480.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 207
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 103/153 (67%), Gaps = 3/153 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-GENKVKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER++ APM
Sbjct: 16 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVQLEDQTTVKFEIWDTAGQERYK--APM 73
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYRNAN A++V+DITQ S +TW++EL+R D +V+ + GNK+DL + R+V +EEA
Sbjct: 74 YYRNANCAVVVYDITQSSSLEKARTWIRELQRQADPSIVIALCGNKSDLAARRQVTQEEA 133
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA +G+ D+F ++K L
Sbjct: 134 QKYAEEEGLMWGETSAKTGEGVADIFTAIAKKL 166
>gi|410919323|ref|XP_003973134.1| PREDICTED: ras-related protein Rab-22A-like [Takifugu rubripes]
Length = 194
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKEL+++ +V+ + GNK DL +REV+ ++A
Sbjct: 75 YRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDAREVSEKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I +VF+ +SK
Sbjct: 135 DYADSIHAIFVETSAKNAININEVFIEISK 164
>gi|351703636|gb|EHB06555.1| Ras-related protein Rab-5B [Heterocephalus glaber]
Length = 215
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 98/152 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V+ EEA
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVDYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>gi|224142139|ref|XP_002324416.1| predicted protein [Populus trichocarpa]
gi|222865850|gb|EEF02981.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 99/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GKTS+V+R++ F TIGA+FFT +++ E +K +WDTAGQER+ S+APM
Sbjct: 19 MGTGKTSLVLRFVKGQFLEFQESTIGAAFFTQVLSLNEATIKFDIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV EL+R + L++ +VGNK DL+ R+V EE
Sbjct: 79 YYRGAAAAVVVYDITSMDSFERAKKWVTELQRQGNPNLIMFLVGNKVDLQQKRKVGIEEG 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+K G + ETSA Q + ++F ++K L
Sbjct: 139 EQYAKENGMVFLETSAKTAQNVNELFYEIAKRL 171
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
+G GKTS+V+R++ F TIGA+FFT +++ E +K +
Sbjct: 19 MGTGKTSLVLRFVKGQFLEFQESTIGAAFFTQVLSLNEATIKFDI 63
>gi|25304086|gb|AAH40143.1| RAB5B protein, partial [Homo sapiens]
Length = 267
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 82 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 141
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 142 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 201
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 202 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 233
>gi|158297331|ref|XP_317585.4| AGAP007901-PA [Anopheles gambiae str. PEST]
gi|157015144|gb|EAA43939.4| AGAP007901-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 109/184 (59%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 39 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQERYHSLAPMY 98
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DI SFA KTWVKEL+R +V+ + GNK DL +SR V+ EEA
Sbjct: 99 YRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANSRVVDYEEAK 158
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPRG 295
Y+ G + ETSA + D+FL + + E L + +++ + + NP
Sbjct: 159 QYADDNGLLFMETSAKTAVNVNDIFLAIGECASHCVAEHLPSEWNLAHENTTVAARNPEN 218
Query: 296 VVEI 299
E+
Sbjct: 219 EHEM 222
>gi|403273236|ref|XP_003928426.1| PREDICTED: ras-related protein Rab-5B-like [Saimiri boliviensis
boliviensis]
Length = 215
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 98/152 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A+AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAHAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>gi|254566325|ref|XP_002490273.1| GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5
[Komagataella pastoris GS115]
gi|238030069|emb|CAY67992.1| GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5
[Komagataella pastoris GS115]
gi|328350666|emb|CCA37066.1| Ras-related protein ORAB-1 [Komagataella pastoris CBS 7435]
Length = 206
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 110/167 (65%), Gaps = 3/167 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V R++ F TIGA+F T I + E +K ++WDTAGQER++S+APM
Sbjct: 23 AVGKSSIVHRFVTDSFDDLRESTIGAAFLTQTIQLDERTTIKFEIWDTAGQERYKSLAPM 82
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYRNAN AL+ +DITQ S K+W++EL++ +V+ +VGNK DLE+ R+V+ +EA
Sbjct: 83 YYRNANCALVAYDITQESSLDRAKSWIQELQKQASADIVVALVGNKLDLEAERKVSTKEA 142
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLR 281
Y+ +G + E SA +GI+DVF +++ L +E L++++ R
Sbjct: 143 KEYADELGLIFKEISAKTGEGIKDVFHSIASKLPV--EEKLNSATKR 187
>gi|157117083|ref|XP_001658691.1| rab5 [Aedes aegypti]
gi|108876182|gb|EAT40407.1| AAEL007845-PA [Aedes aegypti]
Length = 214
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 34 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCIDDTTVKFEIWDTAGQERYHSLAPMY 93
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DI SFA KTWVKEL+R +V+ + GNK DL + R V+ EEA
Sbjct: 94 YRGAQAAIVVYDIQNQDSFARAKTWVKELQRQASPNIVIALAGNKADLVNKRMVDYEEAK 153
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G + ETSA + D+FL + K L
Sbjct: 154 QYADENGLLFMETSAKTAVNVNDIFLAIGKKL 185
>gi|325303414|tpg|DAA34126.1| TPA_exp: Rab5-related subfamily protein 481 [Amblyomma variegatum]
Length = 179
Score = 145 bits (367), Expect = 4e-32, Method: Composition-based stats.
Identities = 68/149 (45%), Positives = 95/149 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F KTWVKEL+R +V+ + GNK DL S R V EEA
Sbjct: 91 YRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPSIVIALAGNKADLASQRAVELEEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVS 264
YS+ G + ETSA D+FL ++
Sbjct: 151 AYSEEXGLLFMETSAKTAMKRHDIFLAIA 179
>gi|402886385|ref|XP_003906610.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Papio anubis]
gi|402886387|ref|XP_003906611.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Papio anubis]
gi|355564343|gb|EHH20843.1| Ras-related protein Rab-5B [Macaca mulatta]
gi|355786201|gb|EHH66384.1| Ras-related protein Rab-5B [Macaca fascicularis]
gi|380787145|gb|AFE65448.1| ras-related protein Rab-5B isoform 1 [Macaca mulatta]
gi|383410993|gb|AFH28710.1| ras-related protein Rab-5B [Macaca mulatta]
gi|384940030|gb|AFI33620.1| ras-related protein Rab-5B [Macaca mulatta]
Length = 215
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>gi|89258417|gb|ABD65432.1| Rab5 [Suberites domuncula]
Length = 207
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 105/167 (62%), Gaps = 6/167 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T +N+ + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVNLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F K+WVKEL+R +V+ + GNK DL S R V+ EEA
Sbjct: 91 YRGAQAAIVVYDITNNDTFVRAKSWVKELQRQASPNIVIALAGNKADLASKRMVDFEEAH 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRV 282
Y++ + ETSA + D+FL ++K QE HT+S R
Sbjct: 151 VYAEENSLLFMETSAKTAMNVNDIFLAIAKSY----QE--HTNSTRA 191
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + TIGA+F T +N+ + VK ++
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVNLDDTTVKFEI 74
>gi|388520843|gb|AFK48483.1| unknown [Lotus japonicus]
Length = 210
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 102/153 (66%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GKTS+ +R++ F + PT+GA+FFT +++ E VK +WDTAGQER+ S+APM
Sbjct: 19 MGTGKTSLALRFVKGQFYPNQEPTVGAAFFTQILSLSEATVKFDIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DI+ +F + WV+EL+R+ ++ LV+ + NK+DLE REV EE
Sbjct: 79 YYRGAAAAIVVYDISSIDTFVQAEKWVQELQRHGNQKLVMALAANKSDLEPKREVETEEG 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++ G Y ETSA + I ++F ++K L
Sbjct: 139 EKFAQENGMFYMETSAKTAENINELFYEIAKRL 171
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
+G GKTS+ +R++ F + PT+GA+FFT +++ E VK +
Sbjct: 19 MGTGKTSLALRFVKGQFYPNQEPTVGAAFFTQILSLSEATVKFDI 63
>gi|156035889|ref|XP_001586056.1| hypothetical protein SS1G_13149 [Sclerotinia sclerotiorum 1980]
gi|154698553|gb|EDN98291.1| hypothetical protein SS1G_13149 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 221
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 105/157 (66%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 28 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 87
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +++ + GNK DL R +
Sbjct: 88 YYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKLDLVTEQPDKRAIT 147
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
E+A +Y++ G ++ETSA + + ++F ++K L
Sbjct: 148 TEDASNYAREAGLLFFETSAKTSENVRELFTAIAKKL 184
>gi|440897250|gb|ELR48982.1| Ras-related protein Rab-5B, partial [Bos grunniens mutus]
Length = 227
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 42 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 101
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 102 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 161
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 162 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 193
>gi|356527789|ref|XP_003532489.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
Length = 199
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 101/153 (66%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GKTS+V+R++ FS + TIGA+FFT +++ E VK +WDTAGQER+ S+APM
Sbjct: 19 MGAGKTSLVLRFVKGEFSEYQDSTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+E+ R + V+ +V NK DLE+ R+V EE
Sbjct: 79 YYRGAAAAIVVYDITSMDSFVRAKKWVREVLRQGNCQNVMFLVANKADLEAERKVRYEEG 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+K G ++ ETSA Q + ++F ++K L
Sbjct: 139 EEYAKENGLSFLETSAKTAQNVNELFYEIAKRL 171
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
+G GKTS+V+R++ FS + TIGA+FFT +++ E VK +
Sbjct: 19 MGAGKTSLVLRFVKGEFSEYQDSTIGAAFFTQVLSLNEATVKFDI 63
>gi|255726788|ref|XP_002548320.1| vacuolar protein sorting-associated protein 21 [Candida tropicalis
MYA-3404]
gi|240134244|gb|EER33799.1| vacuolar protein sorting-associated protein 21 [Candida tropicalis
MYA-3404]
Length = 205
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 101/152 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K VG+ +K ++WDTAGQERF S+APMY
Sbjct: 20 AVGKSSLVLRFVSNEFQENKEPTIGAAFLTQKCTVGDRTIKYEIWDTAGQERFASLAPMY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNA AA++V+DIT+ SF + W+KELK E +V+ +VGNK DLE R+V E
Sbjct: 80 YRNAQAAVVVYDITKPSSFIRARHWIKELKDQSPEGIVIALVGNKLDLEDERKVEASEVE 139
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+ S G +++TSA +G+ +VF + K +
Sbjct: 140 EEANSQGLMFFQTSAKTGEGVLEVFEGIGKNI 171
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K VG+ +K ++
Sbjct: 20 AVGKSSLVLRFVSNEFQENKEPTIGAAFLTQKCTVGDRTIKYEI 63
>gi|301760474|ref|XP_002916104.1| PREDICTED: ras-related protein Rab-5B-like [Ailuropoda melanoleuca]
gi|281353251|gb|EFB28835.1| hypothetical protein PANDA_004070 [Ailuropoda melanoleuca]
Length = 215
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>gi|149756750|ref|XP_001504847.1| PREDICTED: ras-related protein Rab-5B-like [Equus caballus]
Length = 215
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>gi|266879|sp|P29687.1|RAB5_TOBAC RecName: Full=Ras-related protein Rab5
gi|19986|emb|CAA45352.1| Nt-rab5 [Nicotiana tabacum]
Length = 200
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 100/153 (65%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF++ ++V VK ++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT S A K WV+EL++ + +V+ + GNK DLE R+V EEA
Sbjct: 79 YYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVTAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+F ++K L
Sbjct: 139 RLYAEENGLFFMETSAKTATNVNDIFYEIAKRL 171
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
+G GK+S+V+R++ F TIGA+FF++ ++V VK ++
Sbjct: 19 MGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNATVKFEI 63
>gi|60826707|gb|AAX36768.1| RAB5B member RAS oncogene family [synthetic construct]
Length = 216
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>gi|49168452|emb|CAG38721.1| RAB5B [Homo sapiens]
Length = 215
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>gi|329664122|ref|NP_001193120.1| ras-related protein Rab-5B [Bos taurus]
gi|296487563|tpg|DAA29676.1| TPA: RAB5B, member RAS oncogene family-like [Bos taurus]
Length = 215
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>gi|121583768|ref|NP_001073405.1| ras-related protein Rab-5B [Rattus norvegicus]
gi|120537414|gb|AAI29102.1| RAB5B, member RAS oncogene family [Rattus norvegicus]
gi|149029654|gb|EDL84825.1| RAB5B, member RAS oncogene family (predicted), isoform CRA_c
[Rattus norvegicus]
Length = 215
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>gi|355714962|gb|AES05178.1| RAB5B, member RAS oncoprotein family [Mustela putorius furo]
Length = 246
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 62 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 121
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 122 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 181
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 182 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 213
>gi|354488169|ref|XP_003506243.1| PREDICTED: ras-related protein Rab-5B-like [Cricetulus griseus]
gi|344256418|gb|EGW12522.1| Ras-related protein Rab-5B [Cricetulus griseus]
Length = 215
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>gi|4506371|ref|NP_002859.1| ras-related protein Rab-5B isoform 1 [Homo sapiens]
gi|28916687|ref|NP_803130.1| ras-related protein Rab-5B isoform 1 [Mus musculus]
gi|197099504|ref|NP_001125512.1| ras-related protein Rab-5B [Pongo abelii]
gi|354725902|ref|NP_001238965.1| ras-related protein Rab-5B isoform 1 [Homo sapiens]
gi|73968313|ref|XP_531627.2| PREDICTED: ras-related protein Rab-5B isoform 1 [Canis lupus
familiaris]
gi|291389411|ref|XP_002711110.1| PREDICTED: RAB5B, member RAS oncogene family-like [Oryctolagus
cuniculus]
gi|332207599|ref|XP_003252883.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Nomascus
leucogenys]
gi|332839019|ref|XP_003313654.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Pan troglodytes]
gi|344266193|ref|XP_003405165.1| PREDICTED: ras-related protein Rab-5B-like [Loxodonta africana]
gi|348580964|ref|XP_003476248.1| PREDICTED: ras-related protein Rab-5B-like [Cavia porcellus]
gi|390467774|ref|XP_002752642.2| PREDICTED: ras-related protein Rab-5B [Callithrix jacchus]
gi|397509152|ref|XP_003825000.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Pan paniscus]
gi|397509154|ref|XP_003825001.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Pan paniscus]
gi|410046526|ref|XP_003952209.1| PREDICTED: ras-related protein Rab-5B [Pan troglodytes]
gi|410964757|ref|XP_003988919.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Felis catus]
gi|426224979|ref|XP_004006646.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Ovis aries]
gi|46577637|sp|P61020.1|RAB5B_HUMAN RecName: Full=Ras-related protein Rab-5B
gi|48474314|sp|P61021.1|RAB5B_MOUSE RecName: Full=Ras-related protein Rab-5B
gi|75055067|sp|Q5RBG1.1|RAB5B_PONAB RecName: Full=Ras-related protein Rab-5B
gi|20379050|gb|AAM21085.1|AF498937_1 small GTP binding protein RAB5B [Homo sapiens]
gi|35839|emb|CAA38653.1| ras related protein Rab5b [Homo sapiens]
gi|871435|emb|CAA59016.1| rab5b [Mus musculus]
gi|26349073|dbj|BAC38176.1| unnamed protein product [Mus musculus]
gi|31873318|emb|CAD97650.1| hypothetical protein [Homo sapiens]
gi|45708723|gb|AAH32740.1| RAB5B protein [Homo sapiens]
gi|49456341|emb|CAG46491.1| RAB5B [Homo sapiens]
gi|55728309|emb|CAH90899.1| hypothetical protein [Pongo abelii]
gi|117645878|emb|CAL38406.1| hypothetical protein [synthetic construct]
gi|119617268|gb|EAW96862.1| RAB5B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119617269|gb|EAW96863.1| RAB5B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|127797687|gb|AAH50558.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|127798430|gb|AAH56422.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|127798643|gb|AAH65298.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|148692650|gb|EDL24597.1| RAB5B, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|158258631|dbj|BAF85286.1| unnamed protein product [Homo sapiens]
gi|187952647|gb|AAI37575.1| RAB5B, member RAS oncogene family [Mus musculus]
gi|208967242|dbj|BAG73635.1| RAB5B, member RAS oncogene family [synthetic construct]
gi|223459814|gb|AAI37576.1| Rab5b protein [Mus musculus]
gi|410217062|gb|JAA05750.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410268074|gb|JAA22003.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410299464|gb|JAA28332.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410340889|gb|JAA39391.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|444518222|gb|ELV12033.1| Ras-related protein Rab-5B [Tupaia chinensis]
Length = 215
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>gi|112292957|dbj|BAF02856.1| Rab5B [Mus musculus]
Length = 229
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 44 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 103
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 104 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 163
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 164 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 195
>gi|146183318|ref|XP_001025858.2| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|146143634|gb|EAS05613.2| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777784|dbj|BAJ21288.1| Rab-family small GTPase Rab5A [Tetrahymena thermophila]
Length = 199
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 104/149 (69%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+++R++ FS T+GA+F + I +N+ K Q+WDTAGQE+++S+AP+Y
Sbjct: 15 GVGKSSIMMRFVKDEFSATQPTTMGAAFMSKIIKTNDNQFKFQIWDTAGQEKYKSLAPLY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ++V+DIT SF +KTW+ EL++ E L+L +VGNK+DL+ +EV E+A
Sbjct: 75 YREARIGIVVYDITSLASFGVLKTWITELQKQGPENLILAIVGNKSDLQDKQEVPYEDAM 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVS 264
+++K + + TSA +++GI D+F+ ++
Sbjct: 135 NFAKQVDALFELTSAKENRGINDLFMKLA 163
>gi|395540530|ref|XP_003772206.1| PREDICTED: ras-related protein Rab-5B [Sarcophilus harrisii]
Length = 215
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>gi|154417548|ref|XP_001581794.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121916024|gb|EAY20808.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 194
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 97/145 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT M+ RYI F SPTIG S+ + I +K+ L +WDTAGQE +R +APMY
Sbjct: 16 GVGKTCMLHRYINGTFITPTSPTIGGSYLSKVITYEGHKIDLMLWDTAGQEMYRGLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNA A +V+D++ SF ++ WV+EL++N +++ +VGNK DL+S R V+ E+A
Sbjct: 76 YRNAKIAFIVYDVSSAKSFESVMYWVEELRQNTGNDMIIAIVGNKCDLDSKRVVDFEKAE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVF 260
+++KS+ G Y ETSA GI+ +F
Sbjct: 136 NFAKSVNGVYIETSAKSGYGIDQLF 160
>gi|119393795|gb|ABL74413.1| Rab5 [Anopheles gambiae]
Length = 213
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 98/152 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 34 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQERYHSLAPMY 93
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DI SFA KTWVKEL+R +V+ + GNK DL +SR V+ EEA
Sbjct: 94 YRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANSRVVDYEEAK 153
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 154 QYADDNRLLFMETSAKTAVNVNDIFLAIAKKL 185
>gi|357460687|ref|XP_003600625.1| GTP binding protein [Medicago truncatula]
gi|355489673|gb|AES70876.1| GTP binding protein [Medicago truncatula]
Length = 200
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 101/153 (66%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF+ K WV+EL++ + +V+ + GNK+DLE R+V EEA
Sbjct: 79 YYRGAAAAIIVYDITSSDSFSRAKKWVQELQKQGNPNMVMALAGNKSDLEDKRKVTAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + DVF ++K L
Sbjct: 139 RVYAEENGLFFMETSAKSAANVNDVFYEIAKRL 171
>gi|317418736|emb|CBN80774.1| Ras-related protein Rab-22A [Dicentrarchus labrax]
Length = 194
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 100/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKEL+++ +V+ + GNK DL +REV ++A
Sbjct: 75 YRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDAREVPEKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I +VF+ +SK
Sbjct: 135 DYADSIHAIFVETSAKNAININEVFIEISK 164
>gi|417408967|gb|JAA51011.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 242
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 57 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 116
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 117 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 176
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 177 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 208
>gi|294654743|ref|XP_456809.2| DEHA2A10956p [Debaryomyces hansenii CBS767]
gi|199429115|emb|CAG84784.2| DEHA2A10956p [Debaryomyces hansenii CBS767]
Length = 221
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 108/179 (60%), Gaps = 8/179 (4%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + PTIGA+F T K +G+ +K ++WDTAGQERF+S+APMYY
Sbjct: 20 VGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDRTIKYEIWDTAGQERFQSLAPMYY 79
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL--------ESSRE 228
RNA AAL+V+DIT+ SF + WVKEL + + + +VGNK DL ES R+
Sbjct: 80 RNAQAALVVYDITKPASFIKARHWVKELHEQASKDITIALVGNKYDLAENDNENEESLRK 139
Query: 229 VNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDN 287
V+ EE + ++ G ++ETSA + DVF+ + + S S S L V N
Sbjct: 140 VSIEEGKNLAEEEGLLFFETSAKSSYNVNDVFVGIGSKIPDTSANSGTASGLNVNGQSN 198
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K +G+ +K ++
Sbjct: 20 VGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDRTIKYEI 62
>gi|196003396|ref|XP_002111565.1| hypothetical protein TRIADDRAFT_50216 [Trichoplax adhaerens]
gi|190585464|gb|EDV25532.1| hypothetical protein TRIADDRAFT_50216 [Trichoplax adhaerens]
Length = 163
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 101/149 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V+R++ F+ TIGASF + I V E K Q+WDTAGQE++R +APMY
Sbjct: 15 GVGKSSLVLRFVCDTFNACSESTIGASFMSKTIEVNEQSYKYQIWDTAGQEKYRGLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++VFDIT+ SF +K WVKEL++ LV+ + GNK+DL+ REV+ +A
Sbjct: 75 YRGAAAAIVVFDITREESFHTLKDWVKELQQLGPPNLVMAIAGNKSDLDEMREVSSHDAR 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVS 264
++ S+ + ETSAL + + ++F+ +S
Sbjct: 135 TFADSVDALFAETSALTAKNVLELFVEIS 163
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK+S+V+R++ F+ TIGASF + I V E K Q+
Sbjct: 15 GVGKSSLVLRFVCDTFNACSESTIGASFMSKTIEVNEQSYKYQI 58
>gi|384493256|gb|EIE83747.1| ras protein [Rhizopus delemar RA 99-880]
Length = 208
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 100/151 (66%), Gaps = 1/151 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F I++ +N VK ++WDTAGQER++S+APM
Sbjct: 21 AVGKSSLVMRFVKDHFDEYRESTIGAAFLAQTISLDDNTTVKFEIWDTAGQERYKSLAPM 80
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYRNAN A++V+DITQ S K WV EL+R D +V+ + GNK+DL + R + + A
Sbjct: 81 YYRNANCAVIVYDITQASSLDKAKAWVNELQRQADPNIVIALAGNKSDLGARRAIETKVA 140
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ G ++ETSA + + D+FL ++K
Sbjct: 141 QEYADEAGLLFFETSAKTAENVHDLFLAIAK 171
>gi|299117133|emb|CBN75097.1| Rab50, RAB family GTPase [Ectocarpus siliculosus]
Length = 226
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 99/151 (65%), Gaps = 2/151 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKV-KLQVWDTAGQERFRSMAPM 174
GVGKT +V+R+I F+ TIGA F T +I + + K+Q+WDTAGQERFR+MAP+
Sbjct: 22 GVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPL 81
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDE-PLVLCVVGNKTDLESSREVNREE 233
YYRNA A++ FDI SF +K WV+EL+ NV E LVL + KTD+ES R V+R
Sbjct: 82 YYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRAR 141
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVS 264
A H++ +GG ETSA ++ G+ ++F V
Sbjct: 142 AEHFATEVGGIICETSAKENWGVNELFARVC 172
>gi|297692451|ref|XP_002823570.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-21 [Pongo
abelii]
Length = 345
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 104/156 (66%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY F+ T+ A F + +G + + DTAGQERF ++ P+YY
Sbjct: 150 VGKTSLVLRYCENKFNDKHITTLQAIFLPQPLELGGKNICCFLXDTAGQERFHALGPIYY 209
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF +K WVKEL++ + + LC+VGNK DLE R V+ +EA
Sbjct: 210 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 269
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 270 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 305
>gi|297262644|ref|XP_001096821.2| PREDICTED: ras-related protein Rab-5B-like [Macaca mulatta]
Length = 207
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL + K L
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIGKNL 181
>gi|110590632|pdb|2HEI|A Chain A, Crystal Structure Of Human Rab5b In Complex With Gdp
gi|110590633|pdb|2HEI|B Chain B, Crystal Structure Of Human Rab5b In Complex With Gdp
Length = 179
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 18 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 78 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 138 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 169
>gi|431914002|gb|ELK15264.1| Ras-related protein Rab-5B [Pteropus alecto]
Length = 256
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 71 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 130
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 131 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRVVEYEEAQ 190
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 191 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 222
>gi|213514424|ref|NP_001134194.1| Ras-related protein Rab-22A [Salmo salar]
gi|209731382|gb|ACI66560.1| Ras-related protein Rab-22A [Salmo salar]
Length = 195
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 103/155 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDNFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKEL+++ +V+ + GNK DL +REV+ ++A
Sbjct: 75 YRGSAAAIIVYDITKEDSFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDAREVSEKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICL 270
Y+ SI + ETSA I +VF+ +S+ + L
Sbjct: 135 DYADSIHAIFVETSAKNAININEVFIEISQRIPVL 169
>gi|156095051|ref|XP_001613561.1| small GTPase Rab5c [Plasmodium vivax Sal-1]
gi|148802435|gb|EDL43834.1| small GTPase Rab5c, putative [Plasmodium vivax]
Length = 214
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 118/199 (59%), Gaps = 5/199 (2%)
Query: 91 SDKFVVGLSINSRVPNCFEANWFWLG---VGKTSMVVRYIGKMFSHHISPTIGASFFTAK 147
SDK+ G N F + LG VGK+ +VVR+ F + TIGA+F T
Sbjct: 11 SDKYDAGQ--NYHANKVFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQL 68
Query: 148 INVGENKVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRN 207
I++GE +K ++WDTAGQER+RS+APMYYR A+AA++V+DIT SF K W+ ELK
Sbjct: 69 IDIGECTIKFEIWDTAGQERYRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSV 128
Query: 208 VDEPLVLCVVGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++ + GNK DLE +R V+RE A ++ S + ETSA Q + ++FL ++K L
Sbjct: 129 HSNDIIIALAGNKKDLEKNRVVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKL 188
Query: 268 ICLSQESLHTSSLRVYDSD 286
+E S +++ +++
Sbjct: 189 PLHKKEQDKFSGIQINNTE 207
>gi|47220716|emb|CAG11785.1| unnamed protein product [Tetraodon nigroviridis]
Length = 194
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 101/150 (67%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKEL+++ +V+ + GNK DL +REV+ ++A
Sbjct: 75 YRGSAAAIIVYDITKEDSFQTLKNWVKELRQHGPPNIVVAIAGNKCDLLDAREVSEKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I +VF+ +SK
Sbjct: 135 DYADSIHAIFVETSAKNAININEVFIEISK 164
>gi|403167509|ref|XP_003327295.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375167062|gb|EFP82876.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 215
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 107/171 (62%), Gaps = 5/171 (2%)
Query: 101 NSRVPNCFEANWFWLG---VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VK 156
NS PN ++ LG VGK+S+V+R++ F + TIGA+F T + + E +K
Sbjct: 8 NSTRPN-YQFKLVLLGESAVGKSSLVLRFVQNDFQEYRESTIGAAFLTQTVKINEQTTIK 66
Query: 157 LQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCV 216
++WDTAGQER++S+APMYYRNAN A++V+DIT S K W++EL++ D +V+ +
Sbjct: 67 FEIWDTAGQERYKSLAPMYYRNANCAVVVYDITSSASLEKAKVWIRELQKQADAQIVIAL 126
Query: 217 VGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
GNK DLE R+V EEA +++ ++ETSA + D+F ++K L
Sbjct: 127 AGNKADLEERRQVPTEEAQRFAEEENLLFFETSAKDSTNVTDIFTAIAKKL 177
>gi|335307623|ref|XP_003360910.1| PREDICTED: ras-related protein Rab-5B-like [Sus scrofa]
Length = 215
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 150 AYADDNTLLFMETSAKTAMNVNDLFLAIAKKL 181
>gi|291237556|ref|XP_002738699.1| PREDICTED: RAB5B, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 215
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 98/152 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 29 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 88
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+D+T +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 89 YRGAQAAIVVYDVTNQDTFARAKTWVKELQRQASPNIVIALAGNKADLANKRMVEYEEAQ 148
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + D+FL ++K L
Sbjct: 149 AYAEDNSLLFMETSAKTAMNVNDIFLAIAKKL 180
>gi|12311680|emb|CAC24475.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 196
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 99/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 15 MGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 74
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL++ + +V+ + GNK DLE REV EEA
Sbjct: 75 YYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKREVTAEEA 134
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + DVF ++K L
Sbjct: 135 RVYAEENGLFFMETSAKTAANVNDVFHEIAKRL 167
>gi|547478|emb|CAA85733.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098297|prf||2115367E small GTP-binding protein
Length = 200
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 100/153 (65%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL++ + +V+ + GNK+DLE R+V EEA
Sbjct: 79 YYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMALTGNKSDLEDKRKVTAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + DVF ++K L
Sbjct: 139 RVYAEENGLFFMETSAKSAANVNDVFYEIAKRL 171
>gi|384483295|gb|EIE75475.1| hypothetical protein RO3G_00179 [Rhizopus delemar RA 99-880]
Length = 206
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 100/151 (66%), Gaps = 1/151 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F I++ +N VK ++WDTAGQER++S+APM
Sbjct: 19 AVGKSSLVMRFVKDHFDEYRESTIGAAFLAQTISLDDNTTVKFEIWDTAGQERYKSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYRNAN A++V+DITQ S K WV EL+R D +V+ + GNK+DL + R + + A
Sbjct: 79 YYRNANCAVVVYDITQASSLDKAKAWVNELQRQADPNIVIALAGNKSDLGARRAIETKVA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ G ++ETSA + + D+FL ++K
Sbjct: 139 QEYADEAGLLFFETSAKTAENVHDLFLAIAK 169
>gi|324522951|gb|ADY48161.1| Ras-related protein Rab-5B [Ascaris suum]
Length = 217
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + E VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDETTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITSQESFAKAKNWVKELQRQASPNIVIALSGNKADLANKRVVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 150 AYADDNALLFMETSAKTAMNVNDIFLAIAKKL 181
>gi|348537324|ref|XP_003456145.1| PREDICTED: ras-related protein Rab-22A-like [Oreochromis niloticus]
Length = 194
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 100/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKEL+++ +V+ + GNK DL +REV ++A
Sbjct: 75 YRGSAAAIIVYDITKEDSFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDAREVPEKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I +VF+ +SK
Sbjct: 135 DYADSIHAIFVETSAKNAININEVFVEISK 164
>gi|384493359|gb|EIE83850.1| hypothetical protein RO3G_08555 [Rhizopus delemar RA 99-880]
Length = 238
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 111/178 (62%), Gaps = 15/178 (8%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+ +R++ + + + PTIGA+F T K N+ + +K ++WDTAGQERF S+APMY
Sbjct: 35 AVGKSSIALRFVNRQYIENREPTIGAAFLTQKCNLKDRCIKFEIWDTAGQERFHSLAPMY 94
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL------------ 223
YRNA AA++V+DIT + K+WVKEL+R + +V+ +VGNK DL
Sbjct: 95 YRNAQAAIVVYDITNASTLDKAKSWVKELQRQANTDIVIALVGNKLDLVEGQDGEPLNDE 154
Query: 224 ESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLR 281
E R+V +E+A Y+ G ++ETSA Q ++ VF ++ + ES+H+S+ R
Sbjct: 155 EHERKVLKEDAQAYADEAGLLFFETSAKLAQNVDQVFGSIGHKIPL---ESVHSSNSR 209
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+ +R++ + + + PTIGA+F T K N+ + +K ++
Sbjct: 35 AVGKSSIALRFVNRQYIENREPTIGAAFLTQKCNLKDRCIKFEI 78
>gi|150951304|ref|XP_001387608.2| GTP-binding protein of the rab/ypt family [Scheffersomyces stipitis
CBS 6054]
gi|149388482|gb|EAZ63585.2| GTP-binding protein of the rab/ypt family, partial [Scheffersomyces
stipitis CBS 6054]
Length = 212
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 102/159 (64%), Gaps = 7/159 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK--VKLQVWDTAGQERFRSMAP 173
VGK+S+V R++ F TIGA+F T IN+ E+K +K ++WDTAGQER++S+AP
Sbjct: 16 AVGKSSIVHRFVKNTFDDMRESTIGAAFLTQTINLPESKTTIKFEIWDTAGQERYKSLAP 75
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNANAAL V+DIT SF + W+KELK+ E +V+ +VGNK+DLE SREV+ E
Sbjct: 76 MYYRNANAALCVYDITSRSSFGKAQDWIKELKKQAPEGIVIALVGNKSDLEESREVDSAE 135
Query: 234 AFHYSKSI---GGTYY--ETSALQDQGIEDVFLNVSKGL 267
Y + G T + SA QG+ ++F + + L
Sbjct: 136 VEEYVQQANEDGNTIIISDCSAKSGQGVLEIFTQIGRAL 174
>gi|327276980|ref|XP_003223244.1| PREDICTED: ras-related protein Rab-5B-like [Anolis carolinensis]
Length = 215
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALAGNKADLANKRMVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>gi|448083219|ref|XP_004195336.1| Piso0_005889 [Millerozyma farinosa CBS 7064]
gi|359376758|emb|CCE87340.1| Piso0_005889 [Millerozyma farinosa CBS 7064]
Length = 223
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 100/159 (62%), Gaps = 7/159 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK--VKLQVWDTAGQERFRSMAP 173
VGK+S+V R++ F TIGA+F T + + E VK ++WDTAGQER++S+AP
Sbjct: 26 AVGKSSIVHRFVKNTFDDMRESTIGAAFLTQSVKLPEKSATVKFEIWDTAGQERYKSLAP 85
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNANAAL V+DIT SF + W+KELK+ E + +C+VGNKTD++ REVN+EE
Sbjct: 86 MYYRNANAALCVYDITSRSSFNRAQEWIKELKKQAPENITICLVGNKTDMQEEREVNQEE 145
Query: 234 AFHYSKSI---GGTYY--ETSALQDQGIEDVFLNVSKGL 267
Y + G T E SA G+ ++F N++ L
Sbjct: 146 VDEYITQLQNEGTTLISGECSAKSGDGVLEIFTNIANAL 184
>gi|168054193|ref|XP_001779517.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|162669099|gb|EDQ55693.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
Length = 201
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 98/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+ +R++ F + TIGA+F T + V E VK ++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSSLALRFVKGQFFDYQESTIGAAFLTQTLAVNETTVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL+R + LV+ + GNK DL S R++ EE
Sbjct: 79 YYRGAAAAIIVYDITNSDSFGRAKKWVQELQRQGNPNLVMALAGNKADLSSKRKIEAEEG 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA Q + ++F +++ L
Sbjct: 139 QSYAEENGLFFMETSAKTSQNVNELFYEIARKL 171
>gi|345560497|gb|EGX43622.1| hypothetical protein AOL_s00215g358 [Arthrobotrys oligospora ATCC
24927]
Length = 216
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 102/157 (64%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I + EN VK ++WDTAGQER++S+APM
Sbjct: 25 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEIWDTAGQERYKSLAPM 84
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLE----SSREVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +V+ + GNK DL S R +
Sbjct: 85 YYRNANCAVVVYDITQAASLDKAKAWVKELQRQANESIVIALAGNKLDLATANPSKRAIE 144
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y+K G + ETSA + ++++F +++ L
Sbjct: 145 TADAEAYAKEAGLLFLETSAKTAENVQELFTAIARKL 181
>gi|348678129|gb|EGZ17946.1| hypothetical protein PHYSODRAFT_545378 [Phytophthora sojae]
Length = 224
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 111/180 (61%), Gaps = 19/180 (10%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-----KVKLQVWDTAGQERFRSM 171
VGKTS+ +RY FS S TIGASF ++ VG++ K+ LQ+WDTAGQERFRSM
Sbjct: 18 VGKTSITMRYCHGSFSTPTSATIGASFLQKRVIVGDDAGARRKLTLQIWDTAGQERFRSM 77
Query: 172 APMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNR 231
APMYYRNA AA+LVFD+ SF IK W+++L+ +V + +VL VVGNK+D+ S+ + ++
Sbjct: 78 APMYYRNAKAAILVFDLQSEASFEKIKEWLQDLQHHVGDDIVLAVVGNKSDVPSTFDFSK 137
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSA 291
+ F + IG + TSA +G++ +F ESL L+ +D + T A
Sbjct: 138 AQQF--ADEIGALVFRTSAKSGEGVQALF------------ESLAVQLLKKHDQEQRTRA 183
>gi|387017972|gb|AFJ51104.1| ras-related protein Rab-5B-like [Crotalus adamanteus]
Length = 214
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALAGNKADLANKRMVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>gi|320580341|gb|EFW94564.1| GTPase [Ogataea parapolymorpha DL-1]
Length = 849
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 112/181 (61%), Gaps = 3/181 (1%)
Query: 89 LLSDKFVVGLSINSRVPNCFEANWFW-LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAK 147
L SDK ++ I+ V N AN VGK+S+V R++ F+ TIGA+F T
Sbjct: 638 LFSDKEILA-KIDEYVKNTNFANALGESAVGKSSIVHRFVKDSFTDSRESTIGAAFLTQT 696
Query: 148 INVGENK-VKLQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKR 206
I + N VK ++WDTAGQER+RS+A MYYRNA AAL+VFDITQ S K W+KEL++
Sbjct: 697 IQIDANTTVKFEIWDTAGQERYRSLASMYYRNAQAALVVFDITQESSLDKAKYWIKELQK 756
Query: 207 NVDEPLVLCVVGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKG 266
+V+ +VGNK DLE R+++++EA ++ +G Y E SA + ++D F +++
Sbjct: 757 QASSGIVIALVGNKLDLEEERKISKDEAQAFANELGLMYAEVSAKTGEKVKDCFKDIALK 816
Query: 267 L 267
L
Sbjct: 817 L 817
>gi|198471676|ref|XP_002133801.1| GA22589 [Drosophila pseudoobscura pseudoobscura]
gi|198146025|gb|EDY72428.1| GA22589 [Drosophila pseudoobscura pseudoobscura]
Length = 224
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 99/145 (68%), Gaps = 1/145 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-GENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY+ F+ T+ ASF T K+ + E + +L +WDTAGQERF ++ P+Y
Sbjct: 24 VGKTSLVLRYMEDKFNPQHLSTLQASFVTKKVTLPDERRAQLNIWDTAGQERFHALGPIY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR ++ ALLV+DIT SF +K+WV+ELK+ + L +VGNKTDLE R + E+A
Sbjct: 84 YRGSDGALLVYDITDQDSFQKVKSWVRELKQMRGTEISLIIVGNKTDLEEQRAIGYEDAR 143
Query: 236 HYSKSIGGTYYETSALQDQGIEDVF 260
Y++++G Y E SA +++G+ ++F
Sbjct: 144 QYAQTVGAQYLEASAKENEGVAEIF 168
>gi|403217405|emb|CCK71899.1| hypothetical protein KNAG_0I01080 [Kazachstania naganishii CBS
8797]
Length = 253
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 104/157 (66%), Gaps = 4/157 (2%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+ VGK+S+V+R++ F+ + PTIGA+F T ++N+ E+ +K ++WDTAGQERF S+APM
Sbjct: 16 VAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVNINEHTIKFEIWDTAGQERFASLAPM 75
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNA AAL+V+D+T+ SF + WVKEL + +++ +VGNK D+ + R+V
Sbjct: 76 YYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLDEDPTERKVA 135
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
REE ++ ++ETSA + +VFL + + +
Sbjct: 136 REEGEKLAQEENLLFFETSAKTGANVNEVFLKIGENV 172
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 33/45 (73%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
+ VGK+S+V+R++ F+ + PTIGA+F T ++N+ E+ +K ++
Sbjct: 16 VAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVNINEHTIKFEI 60
>gi|195164155|ref|XP_002022914.1| GL16463 [Drosophila persimilis]
gi|194104976|gb|EDW27019.1| GL16463 [Drosophila persimilis]
Length = 223
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 99/145 (68%), Gaps = 1/145 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-GENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY+ F+ T+ ASF T K+ + E + +L +WDTAGQERF ++ P+Y
Sbjct: 24 VGKTSLVLRYMEDKFNPQHLSTLQASFVTKKVTLPDERRAQLNIWDTAGQERFHALGPIY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR ++ ALLV+DIT SF +K+WV+ELK+ + L +VGNKTDLE R + E+A
Sbjct: 84 YRGSDGALLVYDITDQDSFQKVKSWVRELKQMRGTEISLIIVGNKTDLEEQRAIGYEDAR 143
Query: 236 HYSKSIGGTYYETSALQDQGIEDVF 260
Y++++G Y E SA +++G+ ++F
Sbjct: 144 QYAQTVGAQYLEASAKENEGVAEIF 168
>gi|189237939|ref|XP_001813105.1| PREDICTED: similar to small GTP binding protein RAB5 [Tribolium
castaneum]
gi|270008253|gb|EFA04701.1| Rab-protein 5 [Tribolium castaneum]
Length = 215
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 97/151 (64%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +F KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 92 RGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPNIVIALAGNKQDLANKRMVEFEEAQT 151
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G + ETSA + D+FL ++K L
Sbjct: 152 YADENGLLFMETSAKTAMNVNDIFLAIAKKL 182
>gi|198426781|ref|XP_002122313.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 217
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 99/151 (65%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLQDTTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V ++A
Sbjct: 92 RGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALAGNKADLSNKRMVEHDDAVS 151
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+FL +++ L
Sbjct: 152 YAEENGLLFMETSAKTAMHVNDIFLAIAEKL 182
>gi|50550089|ref|XP_502517.1| YALI0D07128p [Yarrowia lipolytica]
gi|49648385|emb|CAG80705.1| YALI0D07128p [Yarrowia lipolytica CLIB122]
Length = 209
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 101/156 (64%), Gaps = 4/156 (2%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K N + +K ++WDTAGQERF S+APMY
Sbjct: 19 AVGKSSLVLRFVSNEFQENKEPTIGAAFLTQKCNFPDRTIKFEIWDTAGQERFASLAPMY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVNR 231
YRNA AL+V+DIT+ SF + WV ELK +++ +VGNK DL ES+R+V
Sbjct: 79 YRNAQTALVVYDITKPQSFIKARHWVSELKSQASPGIIIALVGNKRDLVDDDESARKVAE 138
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+E ++ G ++ETSA ++DVF+ +++ +
Sbjct: 139 DEGKQLAEEEGLLFFETSAKTGLNVKDVFMAIAQKI 174
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K N + +K ++
Sbjct: 19 AVGKSSLVLRFVSNEFQENKEPTIGAAFLTQKCNFPDRTIKFEI 62
>gi|148908627|gb|ABR17422.1| unknown [Picea sitchensis]
Length = 198
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 102/154 (66%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+SMV+R++ F + TIGA+FF+ + + E +K ++WDTAGQER+ S+APM
Sbjct: 16 MGAGKSSMVLRFVRGQFFEYQESTIGAAFFSQTLALNETTIKFEIWDTAGQERYHSLAPM 75
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL+R + +V+ + GNK DL + R+V EEA
Sbjct: 76 YYRGAAAAIVVYDITSLDSFNRAKKWVQELQRQGNPNMVMTLAGNKADLTAKRKVELEEA 135
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+ G + ETSA Q + ++F +++K ++
Sbjct: 136 QAYATENGLFFIETSAKTAQNVNELFYDIAKRVL 169
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
+G GK+SMV+R++ F + TIGA+FF+ + + E +K ++
Sbjct: 16 MGAGKSSMVLRFVRGQFFEYQESTIGAAFFSQTLALNETTIKFEI 60
>gi|54020962|ref|NP_001005723.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49522606|gb|AAH75323.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 215
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL S R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALSGNKADLTSKRMVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>gi|389632835|ref|XP_003714070.1| GTP-binding protein ypt5 [Magnaporthe oryzae 70-15]
gi|351646403|gb|EHA54263.1| GTP-binding protein ypt5 [Magnaporthe oryzae 70-15]
Length = 221
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 102/157 (64%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 29 AVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 88
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL R V
Sbjct: 89 YYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVTEQPDKRAVP 148
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
EA Y++ G ++ETSA + + D+F ++K L
Sbjct: 149 TSEAEAYAREAGLLFFETSAKTAENVRDLFTAIAKKL 185
>gi|429852674|gb|ELA27799.1| rab GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 221
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 104/157 (66%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 30 AVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 89
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL R V+
Sbjct: 90 YYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVNEQPDKRAVS 149
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + ++D+F ++K L
Sbjct: 150 TADAEAYAREAGLLFFETSAKTAENVKDLFTAIAKKL 186
>gi|363754611|ref|XP_003647521.1| hypothetical protein Ecym_6328 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891158|gb|AET40704.1| hypothetical protein Ecym_6328 [Eremothecium cymbalariae
DBVPG#7215]
Length = 205
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 110/171 (64%), Gaps = 8/171 (4%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGE---NKVKLQVWDTAGQERFRSMAP 173
VGK+S+V R++ F TIGA+F + I + E +K ++WDTAGQER++S+AP
Sbjct: 14 VGKSSIVHRFVKDSFDEFRESTIGAAFLSRTIKLAEYDDTMIKFEIWDTAGQERYKSLAP 73
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNV-DEPLVLCVVGNKTDL----ESSRE 228
MYYRNANAAL+V+D+TQ S A ++WV ELK V D+ LV+C+VGNK DL S+
Sbjct: 74 MYYRNANAALVVYDVTQEDSLAKAQSWVNELKSKVGDDDLVICLVGNKVDLAEEDSKSKV 133
Query: 229 VNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSS 279
++ ++A Y++ G ++E SA +G+ +VF N+ + L ++SL S
Sbjct: 134 IDEDDAKDYAEQHGLIFHEVSAKSGRGVIEVFQNIGERLYLQRKDSLAAQS 184
>gi|353242503|emb|CCA74142.1| probable GTP-binding protein ypt5 [Piriformospora indica DSM 11827]
Length = 204
Score = 144 bits (362), Expect = 2e-31, Method: Composition-based stats.
Identities = 65/153 (42%), Positives = 107/153 (69%), Gaps = 1/153 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG-ENKVKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T + + + ++ ++WDTAGQER++S+APM
Sbjct: 16 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVQLDDQTTIRFEIWDTAGQERYKSLAPM 75
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYRNAN A++V+DITQ S ++W++EL+R D +++ + GNKTDLE+ R+V +EEA
Sbjct: 76 YYRNANCAVVVYDITQSASLEKARSWIRELQRQADPSIIIALCGNKTDLEARRQVTQEEA 135
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + E SA +G++D+F+ ++K L
Sbjct: 136 KKYAEEEGLMWCEASAKTGEGVQDIFMAIAKKL 168
>gi|302758026|ref|XP_002962436.1| rab family GTPase [Selaginella moellendorffii]
gi|300169297|gb|EFJ35899.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 109/164 (66%), Gaps = 3/164 (1%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY+ FS S TI AS+ T +++V L +WDTAGQERF ++ P+YY
Sbjct: 21 VGKTSLVLRYVNNQFSDSQSATIQASYLTKRLSVDGAVATLSIWDTAGQERFHALGPIYY 80
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNV-DEPLVLCVVGNKTDLESSREVNREEAF 235
R+A+ ALLV+DI SF +K WVKEL++ ++ +VL + GNK+D++ R+V+ +++
Sbjct: 81 RDADGALLVYDIMDRDSFTRVKNWVKELRKMASNKNIVLTIAGNKSDMDKLRQVDLQDSE 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSS 279
Y+ SIG ++ TSA + GI++ F++++ CL Q T++
Sbjct: 141 RYAASIGANHFVTSAKLNTGIDEAFMDIAT--RCLEQRRKSTAA 182
>gi|336376939|gb|EGO05274.1| hypothetical protein SERLA73DRAFT_174346 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389987|gb|EGO31130.1| hypothetical protein SERLADRAFT_455824 [Serpula lacrymans var.
lacrymans S7.9]
Length = 211
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 105/153 (68%), Gaps = 1/153 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG-ENKVKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T + + ++ VK ++WDTAGQER++S APM
Sbjct: 16 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDQSTVKFEIWDTAGQERYKSQAPM 75
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYRNAN A++V+DITQ S +TW++EL+R D +V+ + GNKTDL + R+V +EEA
Sbjct: 76 YYRNANCAVVVYDITQSASLEKARTWIRELQRQADPSIVIALCGNKTDLSARRQVTQEEA 135
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA +G+ D+F ++K L
Sbjct: 136 KKYAEEEGLMWGETSAKSGEGVADIFTAIAKKL 168
>gi|209880089|ref|XP_002141484.1| Ras family protein [Cryptosporidium muris RN66]
gi|209557090|gb|EEA07135.1| Ras family protein [Cryptosporidium muris RN66]
Length = 219
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 106/169 (62%), Gaps = 4/169 (2%)
Query: 103 RVPNCFEANWFWLG---VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQ 158
+ P + LG VGK+ +VVR+ FS + PTIGA+F T +N+ ++ VK +
Sbjct: 7 KTPKTYHLKLVLLGDASVGKSCLVVRFAKDEFSEYQEPTIGAAFMTQSVNIDDDYIVKFE 66
Query: 159 VWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVG 218
+WDTAGQER+RS+APMYYR A AA++V+DIT SF K+W+ ELK + +V+ +VG
Sbjct: 67 IWDTAGQERYRSLAPMYYRGAAAAIVVYDITNSDSFDGAKSWISELKSINNNDIVIALVG 126
Query: 219 NKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
NK DLE +R V+ E A Y+K Y ETSA ++++F +++ L
Sbjct: 127 NKCDLEGNRTVSSEIARCYAKENDILYLETSAKTGHNVQEIFEEIARKL 175
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 327 RVPNCFEANWFWLG---VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKV 379
+ P + LG VGK+ +VVR+ FS + PTIGA+F T +N+ ++ +
Sbjct: 7 KTPKTYHLKLVLLGDASVGKSCLVVRFAKDEFSEYQEPTIGAAFMTQSVNIDDDYI 62
>gi|302815420|ref|XP_002989391.1| rab family GTPase [Selaginella moellendorffii]
gi|300142785|gb|EFJ09482.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 109/164 (66%), Gaps = 3/164 (1%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY+ FS S TI AS+ T +++V L +WDTAGQERF ++ P+YY
Sbjct: 21 VGKTSLVLRYVNNQFSDSQSATIQASYLTKRLSVDGAVATLSIWDTAGQERFHALGPIYY 80
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNV-DEPLVLCVVGNKTDLESSREVNREEAF 235
R+A+ ALLV+DI SF +K WVKEL++ ++ +VL + GNK+D++ R+V+ +++
Sbjct: 81 RDADGALLVYDIMDRDSFTRVKNWVKELRKMASNKNIVLTIAGNKSDMDKLRQVDLQDSE 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSS 279
Y+ SIG ++ TSA + GI++ F++++ CL Q T++
Sbjct: 141 RYAASIGANHFVTSAKLNTGIDEAFMDIAT--RCLEQRRKSTAA 182
>gi|90079481|dbj|BAE89420.1| unnamed protein product [Macaca fascicularis]
Length = 215
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQETFVRAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>gi|388579646|gb|EIM19967.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 231
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 106/173 (61%), Gaps = 21/173 (12%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K + + +K ++WDTAGQERFRS+APMY
Sbjct: 19 AVGKSSVVLRFVQNDFQEYKEPTIGAAFLTQKCRLEDKVIKFEIWDTAGQERFRSLAPMY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL------------ 223
YRNA +A++V+DIT SF K+WVKEL+R +++ +VGNK DL
Sbjct: 79 YRNALSAVVVYDITSSSSFEKAKSWVKELQRQASPNVIIALVGNKLDLVEGSQEEEEEER 138
Query: 224 ---------ESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+ SR ++R+EA Y++ ++ETSA +G+ +VF ++K +
Sbjct: 139 DDATATPNQDQSRAISRDEAQAYAEESNLLFFETSAKTGEGVVEVFTEIAKKI 191
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K + + +K ++
Sbjct: 19 AVGKSSVVLRFVQNDFQEYKEPTIGAAFLTQKCRLEDKVIKFEI 62
>gi|225466271|ref|XP_002272169.1| PREDICTED: ras-related protein Rab5 [Vitis vinifera]
gi|147795279|emb|CAN67253.1| hypothetical protein VITISV_014431 [Vitis vinifera]
Length = 200
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 99/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SFA K WV+EL++ + +V+ + GNK DLE R+V EEA
Sbjct: 79 YYRGAAAAIIVYDITSTESFARAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVTAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D F ++K L
Sbjct: 139 RVYAEENGLFFTETSAKTAVNVNDTFYEIAKRL 171
>gi|307182248|gb|EFN69579.1| Ataxin-2-like protein [Camponotus floridanus]
Length = 844
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 103/163 (63%), Gaps = 8/163 (4%)
Query: 416 NNKKKNRVATTGRPVRSRGGPDRLAINPEGVYCNARFMQAITLHIGDKVTVYTVHGKQFE 475
N+K+KNR P R+R +R + EGVY NA FM AIT H+G+ V + T +G +E
Sbjct: 2 NSKRKNRTNNNRSP-RARVPQERNVVA-EGVYNNAHFMHAITGHVGNVVQIQTQNGSIYE 59
Query: 476 GYLKTFSKQFELVISMTHQVDPENPQCIDPNTVVDMKIFKLDDIVRIEAKNVDLEYAVRD 535
G +TFS F++V+ M H+V+ + I + +V+ IFK D+V I AK+ DLEYA+RD
Sbjct: 60 GIFRTFSSNFDVVLEMAHRVE----EKISADNIVEKLIFKSHDVVTISAKDADLEYAIRD 115
Query: 536 TFATDTAISKFNGVIGERELEPWAEDMLGPGGDDDFELDQMCN 578
TF TDTAISKFNG++GE+ELEPW D D ELD N
Sbjct: 116 TFQTDTAISKFNGLVGEKELEPW--DPPTAMNGTDLELDGASN 156
>gi|388515701|gb|AFK45912.1| unknown [Medicago truncatula]
Length = 200
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 101/153 (66%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF+ K WV+EL++ + +V+ + G+K+DLE R+V EEA
Sbjct: 79 YYRGAAAAIIVYDITSSDSFSRAKKWVQELQKQGNPNMVMALAGSKSDLEDKRDVTAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + DVF ++K L
Sbjct: 139 RVYAEENGLFFMETSAKSAANVNDVFYEIAKRL 171
>gi|336463884|gb|EGO52124.1| hypothetical protein NEUTE1DRAFT_132863 [Neurospora tetrasperma
FGSC 2508]
Length = 1001
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I + EN VK ++WDTAGQER++S+APM
Sbjct: 29 AVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTIALDENTTVKFEIWDTAGQERYKSLAPM 88
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +++ + GNK DL R +
Sbjct: 89 YYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLDLVQEQPDKRAIQ 148
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y+K G ++ETSA + ++++F ++K L
Sbjct: 149 TADAQAYAKEAGLLFFETSAKTAENVQNLFTEIAKKL 185
>gi|365758386|gb|EHN00232.1| Vps21p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 209
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 102/153 (66%), Gaps = 3/153 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F+ + PTIGA+F T ++ + E+ VK ++WDTAGQERF S+APMY
Sbjct: 17 AVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL---ESSREVNRE 232
YRNA AAL+V+D+T+ SF + WVKEL + +++ +VGNK D+ R+V +E
Sbjct: 77 YRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDVLQDGGERKVAKE 136
Query: 233 EAFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
E ++ G ++ETSA + + +VFL + +
Sbjct: 137 EGEKLAEEKGLLFFETSAKTGENVNNVFLGIGE 169
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F+ + PTIGA+F T ++ + E+ VK ++
Sbjct: 17 AVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEI 60
>gi|124505771|ref|XP_001350999.1| Rab5c, GTPase [Plasmodium falciparum 3D7]
gi|23510642|emb|CAD49027.1| Rab5c, GTPase [Plasmodium falciparum 3D7]
Length = 214
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 118/199 (59%), Gaps = 5/199 (2%)
Query: 91 SDKFVVGLSINSRVPNCFEANWFWLG---VGKTSMVVRYIGKMFSHHISPTIGASFFTAK 147
++K+ S NS F + LG VGK+ +VVR+ F + TIGA+F T
Sbjct: 11 NEKYETNQSYNS--TKVFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQL 68
Query: 148 INVGENKVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRN 207
I++GE +K ++WDTAGQER+RS+APMYYR A+AA++V+DIT SF K W+ ELK
Sbjct: 69 IDIGECTIKFEIWDTAGQERYRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSV 128
Query: 208 VDEPLVLCVVGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++ + GNK DLE R V+RE A ++ S + ETSA Q + ++FL ++K L
Sbjct: 129 HSNDIIIALAGNKNDLEEHRAVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKL 188
Query: 268 ICLSQESLHTSSLRVYDSD 286
+E ++++ +++
Sbjct: 189 PLHKKEQERCPAIQINNTE 207
>gi|119180268|ref|XP_001241623.1| ras-related protein [Coccidioides immitis RS]
gi|303321211|ref|XP_003070600.1| Ras-related protein ypt5, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240110296|gb|EER28455.1| Ras-related protein ypt5, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320035923|gb|EFW17863.1| GTP-binding protein ypt5 [Coccidioides posadasii str. Silveira]
gi|392866497|gb|EJB11129.1| GTP-binding protein ypt5 [Coccidioides immitis RS]
Length = 217
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 118/194 (60%), Gaps = 17/194 (8%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 27 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 86
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +++ + GNK DL + R V
Sbjct: 87 YYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKLDLVTDSPDKRAVQ 146
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITS 290
+A Y++ G ++ETSA + ++F ++K L L + R N+ S
Sbjct: 147 TADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKL------PLDQAGPR-----NLRS 195
Query: 291 ANPRGVVEITPLSS 304
NPR V++ P S+
Sbjct: 196 -NPRPGVDLRPESA 208
>gi|312376181|gb|EFR23347.1| hypothetical protein AND_13023 [Anopheles darlingi]
Length = 183
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 97/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 34 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQERYHSLAPMY 93
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DI S+A KTWVKEL+R +V+ + GNK DL +SR V+ EEA
Sbjct: 94 YRGAQAAIVVYDIQNSDSYARAKTWVKELQRQASPNIVIALAGNKADLANSRVVDYEEAK 153
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ G + ETSA + D+FL + +
Sbjct: 154 QYADDNGLLFMETSAKTAVNVNDIFLAIGE 183
>gi|356569718|ref|XP_003553043.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
Length = 200
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 99/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL++ + +V+ + GNK DLE R+V EEA
Sbjct: 79 YYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVTAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+F ++K L
Sbjct: 139 RVYAEENGLFFMETSAKTASNVNDIFYEIAKRL 171
>gi|50418070|gb|AAH77537.1| LOC445870 protein, partial [Xenopus laevis]
Length = 215
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 100/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 37 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVPHQNELHKFLIWDTAGQERFRALAPMY 96
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +EA
Sbjct: 97 YRGSTAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLNDVREVLEKEAK 156
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +SK
Sbjct: 157 DYADSINAVFVETSAKNAININELFIEISK 186
>gi|442760989|gb|JAA72653.1| Putative rab subfamily protein of small gtpase, partial [Ixodes
ricinus]
Length = 262
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 88/111 (79%)
Query: 150 VGENKVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVD 209
+G+ +V +Q+WDTAGQERFRSMAP+YYR ANAA++V+DIT +SF +K WV EL+RNV+
Sbjct: 66 IGDVRVSMQIWDTAGQERFRSMAPLYYRKANAAIIVYDITSPNSFEGMKYWVTELRRNVE 125
Query: 210 EPLVLCVVGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVF 260
E + + +VGNK DL S R V++E A +++SIGG ++E SAL +GI+D+F
Sbjct: 126 EAIGIFIVGNKCDLSSHRNVSQEAARKFAESIGGNFFECSALSSEGIDDIF 176
>gi|302812155|ref|XP_002987765.1| rab family GTPase [Selaginella moellendorffii]
gi|302821214|ref|XP_002992271.1| rab family GTPase [Selaginella moellendorffii]
gi|300139921|gb|EFJ06652.1| rab family GTPase [Selaginella moellendorffii]
gi|300144384|gb|EFJ11068.1| rab family GTPase [Selaginella moellendorffii]
Length = 199
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 99/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F + TIGA+F T + V E VK ++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSSLVLRFVKGQFFDYQESTIGAAFLTQTLAVNETTVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SFA K WV+EL+R + LV+ + GNK DL + R++ +E
Sbjct: 79 YYRGAAAAIIVYDITNAESFARAKKWVQELQRQGNANLVMALAGNKADLAAKRKIETQEG 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G + ETSA + + ++F +++ L
Sbjct: 139 QSYADENGLFFMETSAKTAENVNELFYEIARKL 171
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
+G GK+S+V+R++ F + TIGA+F T + V E VK ++
Sbjct: 19 MGAGKSSLVLRFVKGQFFDYQESTIGAAFLTQTLAVNETTVKFEI 63
>gi|168025719|ref|XP_001765381.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
gi|162683434|gb|EDQ69844.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
Length = 208
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 126/209 (60%), Gaps = 14/209 (6%)
Query: 108 FEANWFWLG---VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAG 164
+ N LG VGKTS+ +RYI +F TI AS+ T +++V V + +WDT G
Sbjct: 7 IQINLVLLGDGRVGKTSLALRYINNVFFEKQMATIQASYLTKRLSVDGQDVNICIWDTTG 66
Query: 165 QERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLE 224
QERF + P YYR+A+AALLV+D+ SF +K+WV+ELK+ + +VL + GNK+D++
Sbjct: 67 QERFHGLGPFYYRDADAALLVYDLLDKDSFDRVKSWVRELKKMASKTIVLAIAGNKSDMD 126
Query: 225 SSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYD 284
SR VN +A YS+SIG +++ SA + GIE+ FL+ ++ +I Q+ + S
Sbjct: 127 QSRHVNMHDAV-YSESIGASHFVASAKLNTGIEEAFLDQARRVI---QQRVAVGS----- 177
Query: 285 SDNITSANPRGVVEI-TPLSSLDTPPLTE 312
+N A R +V + P++++ TP +E
Sbjct: 178 ENNKGVARRRSIVIVDKPIAAI-TPSTSE 205
>gi|383854195|ref|XP_003702607.1| PREDICTED: ras-related protein Rab-5C-like [Megachile rotundata]
Length = 214
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F +TWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQDTFVRAQTWVKELQRQASPSIVIALAGNKADLANKRVVEFEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G + ETSA + D+FL ++K L
Sbjct: 150 TYADENGLLFMETSAKTAMNVNDIFLAIAKKL 181
>gi|448114201|ref|XP_004202515.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
gi|359383383|emb|CCE79299.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
Length = 217
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 100/158 (63%), Gaps = 8/158 (5%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K +GE +K ++WDTAGQERF S+APMY
Sbjct: 19 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQERFSSLAPMY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS--------R 227
YRNA AAL+V+DIT+ SF + WVKEL+ + + + +VGNK DL S R
Sbjct: 79 YRNAQAALVVYDITKAASFIKARRWVKELQDQASKDITIALVGNKYDLVESDKDGEDGLR 138
Query: 228 EVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
V+ EE ++ G ++ETSA + +VF+++ K
Sbjct: 139 AVSIEEGKKLAEEEGLLFFETSAKTAHNVNEVFIDIGK 176
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K +GE +K ++
Sbjct: 19 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEI 62
>gi|167538218|ref|XP_001750774.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770691|gb|EDQ84373.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 107/169 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + V + VK ++WDTAGQER+ S+APMY
Sbjct: 25 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVAVDDVTVKFEIWDTAGQERYHSLAPMY 84
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F ++WVKEL+R + +V+ + GNK DL S ++V+ EA
Sbjct: 85 YRGAQAAIVVYDITNADTFQRARSWVKELQRQANPNIVIALAGNKADLASKQQVDTNEAR 144
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYD 284
Y++ G + ETSA + ++F+ ++K L +Q +L+V D
Sbjct: 145 AYAEENGLLFMETSAKNAMNVTEIFMAIAKKLPKNTQPGPRGDTLKVAD 193
>gi|17066210|emb|CAD12439.1| Rab5c GTPase [Plasmodium falciparum 3D7]
Length = 214
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 109/180 (60%), Gaps = 5/180 (2%)
Query: 91 SDKFVVGLSINSRVPNCFEANWFWLG---VGKTSMVVRYIGKMFSHHISPTIGASFFTAK 147
++K+ S NS F + LG VGK+ +VVR+ F + TIGA+F T
Sbjct: 11 NEKYETNQSYNS--TKVFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQL 68
Query: 148 INVGENKVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRN 207
I++GE +K ++WDTAGQER+RS+APMYYR A+AA++V+DIT SF K W+ ELK
Sbjct: 69 IDIGECTIKFEIWDTAGQERYRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSV 128
Query: 208 VDEPLVLCVVGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++ + GNK DLE R V+RE A ++ S + ETSA Q + ++FL ++K L
Sbjct: 129 HSNDIIIALAGNKNDLEEHRAVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKL 188
>gi|448111644|ref|XP_004201890.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
gi|359464879|emb|CCE88584.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
Length = 217
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 100/158 (63%), Gaps = 8/158 (5%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K +GE +K ++WDTAGQERF S+APMY
Sbjct: 19 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQERFSSLAPMY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS--------R 227
YRNA AAL+V+DIT+ SF + WVKEL+ + + + +VGNK DL S R
Sbjct: 79 YRNAQAALVVYDITKAASFIKARRWVKELQDQASKDITIALVGNKYDLVESDKDGEDGLR 138
Query: 228 EVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
V+ EE ++ G ++ETSA + +VF+++ K
Sbjct: 139 AVSIEEGKKLAEEEGLLFFETSAKTAHNVNEVFIDIGK 176
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K +GE +K ++
Sbjct: 19 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEI 62
>gi|258578121|ref|XP_002543242.1| GTP-binding protein ypt5 [Uncinocarpus reesii 1704]
gi|237903508|gb|EEP77909.1| GTP-binding protein ypt5 [Uncinocarpus reesii 1704]
Length = 217
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 27 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 86
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +++ + GNK DL + R V
Sbjct: 87 YYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKLDLVTDSPDKRAVQ 146
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + ++F ++K L
Sbjct: 147 AADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKL 183
>gi|170587854|ref|XP_001898689.1| Ras-related protein Rab-5B [Brugia malayi]
gi|158593959|gb|EDP32553.1| Ras-related protein Rab-5B, putative [Brugia malayi]
Length = 217
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQESFAKAKNWVKELQRQASPNIVIALSGNKADLANKRVVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + D+FL ++K L
Sbjct: 150 AYAEDNALLFMETSAKTAMNVNDIFLAIAKKL 181
>gi|313213264|emb|CBY37104.1| unnamed protein product [Oikopleura dioica]
gi|313226486|emb|CBY21631.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 108/172 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F H TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 23 AVGKSSLVLRFVKGEFKDHQESTIGAAFLTQTVCLDDVTVKFEIWDTAGQERYHSLAPMY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DI +F+ + WVKEL++ ++ +V+ + GNK DL + RE+ EEA
Sbjct: 83 YRGAQAAVVVYDIQCPDTFSRAQAWVKELRQQANQDIVIALAGNKADLAAKREIETEEAE 142
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDN 287
Y+K + ETSA + D+FL ++K L +S S++ + +S N
Sbjct: 143 VYAKENNLLFMETSAKTALNVNDLFLQIAKKLPKKDSQSGAASNVNLGESSN 194
>gi|378725883|gb|EHY52342.1| GTP-binding protein ypt5 [Exophiala dermatitidis NIH/UT8656]
Length = 219
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 117/194 (60%), Gaps = 17/194 (8%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 28 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 87
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +V+ + GNK DL R +
Sbjct: 88 YYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVNEHPDKRAIQ 147
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITS 290
+A Y+K G ++ETSA + ++F ++K L L + R N+ S
Sbjct: 148 TADAEAYAKEAGLLFFETSAKTATNVRELFTAIAKKL------PLDQAGPR-----NLRS 196
Query: 291 ANPRGVVEITPLSS 304
NPR V++ P S+
Sbjct: 197 -NPRPGVDLRPEST 209
>gi|12311684|emb|CAC24477.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 99/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL++ + +V+ + GNK DLE R+V EEA
Sbjct: 79 YYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVTAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + DVF ++K L
Sbjct: 139 RVYAEENGLFFMETSAKTAANVNDVFHEIAKRL 171
>gi|12311682|emb|CAC24476.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 99/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL++ + +V+ + GNK DLE R+V EEA
Sbjct: 79 YYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVTAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + DVF ++K L
Sbjct: 139 RVYAEENGLFFMETSAKTAANVNDVFHEIAKRL 171
>gi|66359380|ref|XP_626868.1| Rab5 like small GTpase [Cryptosporidium parvum Iowa II]
gi|46228121|gb|EAK89020.1| Rab5 like small GTpase [Cryptosporidium parvum Iowa II]
Length = 218
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 103/152 (67%), Gaps = 1/152 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPMY 175
VGK+ +VVR+ F + PTIGA+F T +NV ++ VK ++WDTAGQER+RS+APMY
Sbjct: 24 VGKSCLVVRFSKDEFHEYQEPTIGAAFMTQSVNVDDDYTVKFEIWDTAGQERYRSLAPMY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F K+W+ EL+ + +V+ +VGNK DLESSR V+ E A
Sbjct: 84 YRGAAAAIVVYDITNVETFQGAKSWISELQNINNNDIVVALVGNKYDLESSRTVDSETAR 143
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+Y+K G +ETSA ++++F +++ L
Sbjct: 144 NYAKEKGILSFETSAKTGYNVQELFEEIARKL 175
>gi|367051801|ref|XP_003656279.1| hypothetical protein THITE_2069455 [Thielavia terrestris NRRL 8126]
gi|347003544|gb|AEO69943.1| hypothetical protein THITE_2069455 [Thielavia terrestris NRRL 8126]
Length = 219
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 105/157 (66%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 28 AVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 87
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +++ + GNK DL + R V
Sbjct: 88 YYRNANCAVVVYDITQATSLDKAKSWVKELQRQANENIIIALAGNKLDLVAEQPDKRAVQ 147
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + ++++F ++K L
Sbjct: 148 TADAEAYAREAGLLFFETSAKTAENVQELFTAIAKKL 184
>gi|307203579|gb|EFN82612.1| Ras-related protein Rab-5C [Harpegnathos saltator]
Length = 214
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 98/152 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F+ +TWVKEL+R +V+ + GNK DL + R V +EA
Sbjct: 90 YRGAQAAIVVYDITNQDTFSRAQTWVKELQRQASPSIVIALAGNKADLANKRVVEYDEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G + ETSA + D+FL ++K L
Sbjct: 150 TYADENGLLFMETSAKTAMNVNDIFLAIAKKL 181
>gi|332017090|gb|EGI57889.1| Ras-related protein Rab-5C [Acromyrmex echinatior]
Length = 214
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 98/152 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F+ +TWVKEL+R +V+ + GNK DL + R V +EA
Sbjct: 90 YRGAQAAIVVYDITNQDTFSRAQTWVKELQRQASPSIVIALAGNKADLANKRVVEYDEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G + ETSA + D+FL ++K L
Sbjct: 150 TYADENGLLFMETSAKTAMNVNDIFLAIAKKL 181
>gi|442760935|gb|JAA72626.1| Putative gtpase, partial [Ixodes ricinus]
Length = 309
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 90/115 (78%)
Query: 150 VGENKVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVD 209
+G+ +V +Q+WDTAGQERFRSMAP+YYR ANAA++V+DIT +SF +K WV EL+RNV+
Sbjct: 113 IGDVRVSMQIWDTAGQERFRSMAPLYYRKANAAIIVYDITSPNSFEGMKYWVTELRRNVE 172
Query: 210 EPLVLCVVGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVS 264
E + + +VGNK DL S R V++E A +++SIGG ++E SAL +G++D+F ++
Sbjct: 173 EAIGIFIVGNKCDLSSHRNVSQEAARKFAESIGGNFFECSALSSEGVDDIFRELA 227
>gi|290998075|ref|XP_002681606.1| rab family small GTPase [Naegleria gruberi]
gi|284095231|gb|EFC48862.1| rab family small GTPase [Naegleria gruberi]
Length = 236
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 128/220 (58%), Gaps = 17/220 (7%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+ +R+I +F + TI A++ I VG +V L VWDTAGQERF ++ P+YY
Sbjct: 17 VGKTSLTLRFIKDVFDDNQQSTIQATYLQKDIIVGNQQVTLSVWDTAGQERFHALGPIYY 76
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
RNA+ ALLV+DIT +F KTWV EL++ + + +V+ +VGNK D+ R+V+ E+A
Sbjct: 77 RNADGALLVYDITDQDTFDRAKTWVMELRKVLGDDIVITIVGNKCDMIKHRQVSEEQALE 136
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQES-------LHTSSLRVYDSDNIT 289
Y++S+G + SA ++ + + FL+++K ++ + H +S+R+
Sbjct: 137 YAQSVGANHLLVSAKANKNVAESFLDLTKRILEKKANTPMGGSPQAHRASVRM------- 189
Query: 290 SANPRGVVEITPLSSLDTPPLTEAETAKFVVGLSINSRVP 329
+ RGV +T + + P+ +++ V GL+I P
Sbjct: 190 --STRGVSGLTIQENPNQKPVNNRISSR-VSGLTITDEEP 226
>gi|147902647|ref|NP_001090471.1| RAB31, member RAS oncogene family [Xenopus laevis]
gi|71682203|gb|AAI00187.1| Rab31 protein [Xenopus laevis]
Length = 193
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 100/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVPHQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +EA
Sbjct: 75 YRGSTAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLNDVREVLEKEAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +SK
Sbjct: 135 DYADSINAVFVETSAKNAININELFIEISK 164
>gi|307189232|gb|EFN73680.1| Ras-related protein Rab-5C [Camponotus floridanus]
gi|322784961|gb|EFZ11732.1| hypothetical protein SINV_10350 [Solenopsis invicta]
Length = 214
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 98/152 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F+ +TWVKEL+R +V+ + GNK DL + R V +EA
Sbjct: 90 YRGAQAAIVVYDITNQDTFSRAQTWVKELQRQASPSIVIALAGNKADLANKRVVEYDEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G + ETSA + D+FL ++K L
Sbjct: 150 TYADENGLLFMETSAKTAMNVNDIFLAIAKKL 181
>gi|156553974|ref|XP_001602993.1| PREDICTED: ras-related protein Rab-5A-like isoform 1 [Nasonia
vitripennis]
gi|345492181|ref|XP_003426794.1| PREDICTED: ras-related protein Rab-5A-like isoform 2 [Nasonia
vitripennis]
gi|345492184|ref|XP_003426795.1| PREDICTED: ras-related protein Rab-5A-like isoform 3 [Nasonia
vitripennis]
Length = 213
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + E VK ++WDTAGQER+ S+APMYY
Sbjct: 30 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDETTVKFEIWDTAGQERYHSLAPMYY 89
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +F TWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 RGAQAAIVVYDITNQDTFMRATTWVKELQRQASPSIVIALAGNKADLGNKRVVEFEEAQA 149
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G + ETSA + D+FL ++K L
Sbjct: 150 YADENGLLFMETSAKTAMNVNDIFLAIAKKL 180
>gi|261205984|ref|XP_002627729.1| GTP-binding protein ypt5 [Ajellomyces dermatitidis SLH14081]
gi|239592788|gb|EEQ75369.1| GTP-binding protein ypt5 [Ajellomyces dermatitidis SLH14081]
gi|327350703|gb|EGE79560.1| Ypt5 protein [Ajellomyces dermatitidis ATCC 18188]
Length = 217
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 102/157 (64%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 27 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 86
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +V+ + GNK DL R +
Sbjct: 87 YYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTDSPDKRAIQ 146
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + ++F ++K L
Sbjct: 147 TADAEAYAREAGLLFFETSAKSSTNVRELFTAIAKKL 183
>gi|193875876|gb|ACF24574.1| Ras-related small GTPase Rab5 [Gymnochlora stellata]
Length = 198
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 100/152 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S V R++ F PTIGA+F T I + + VK ++WDTAGQER+RS+APMY
Sbjct: 18 AVGKSSCVERFVKNEFFEFQQPTIGAAFLTQTIPLEDYIVKFEIWDTAGQERYRSLAPMY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AAL+V+DIT SF KTW++EL+R +V+ + GNK DL S R+++ +EA
Sbjct: 78 YRGAAAALVVYDITDPDSFDGAKTWIQELQRQGAADIVIGLAGNKLDLSSQRKIDSKEAK 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
++ G +YETSA ++++F+ +++ L
Sbjct: 138 SFADENGCIFYETSAKTGANVQEIFVAIAQKL 169
>gi|67610128|ref|XP_667084.1| Rab5 [Cryptosporidium hominis TU502]
gi|54658188|gb|EAL36862.1| Rab5 [Cryptosporidium hominis]
Length = 218
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 103/152 (67%), Gaps = 1/152 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPMY 175
VGK+ +VVR+ F + PTIGA+F T +NV ++ VK ++WDTAGQER+RS+APMY
Sbjct: 24 VGKSCLVVRFSKDEFHEYQEPTIGAAFMTQSVNVDDDYTVKFEIWDTAGQERYRSLAPMY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F K+W+ EL+ + +V+ +VGNK DLESSR V+ E A
Sbjct: 84 YRGAAAAIVVYDITNVETFQGAKSWISELQNINNNDIVVALVGNKYDLESSRTVDSETAR 143
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+Y+K G +ETSA ++++F +++ L
Sbjct: 144 NYAKEKGILSFETSAKTGYNVQELFEEIARKL 175
>gi|451852641|gb|EMD65936.1| hypothetical protein COCSADRAFT_198789 [Cochliobolus sativus
ND90Pr]
gi|451997104|gb|EMD89569.1| hypothetical protein COCHEDRAFT_1021897 [Cochliobolus
heterostrophus C5]
Length = 221
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 105/157 (66%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I + EN VK ++WDTAGQER++S+APM
Sbjct: 29 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEIWDTAGQERYKSLAPM 88
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL--ES--SREVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL ES R ++
Sbjct: 89 YYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNKLDLVTESPDKRAIS 148
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + ++++F ++K L
Sbjct: 149 TADAEQYAREAGLLFFETSAKTSENVKELFTAIAKKL 185
>gi|348677560|gb|EGZ17377.1| hypothetical protein PHYSODRAFT_346157 [Phytophthora sojae]
Length = 197
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPM 174
VGK+ +VVR++ F PTIGA+F T + + + VK ++WDTAGQER+RS+APM
Sbjct: 18 AVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVGLEDGLTVKFEIWDTAGQERYRSLAPM 77
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+D+T SF K+WVKEL+R D +V+ + GNK DLE+ R+V EEA
Sbjct: 78 YYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDPNVVIALAGNKADLEARRKVEFEEA 137
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA ++D+F+ ++K L
Sbjct: 138 HQYAEDNDILHMETSAKTAVNVKDLFVAIAKRL 170
>gi|212537727|ref|XP_002149019.1| RAB GTPase Ypt5, putative [Talaromyces marneffei ATCC 18224]
gi|210068761|gb|EEA22852.1| RAB GTPase Ypt5, putative [Talaromyces marneffei ATCC 18224]
Length = 218
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 105/157 (66%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 27 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 86
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +++ + GNK DL + R +
Sbjct: 87 YYRNANCAVVVYDITQSASLDKAKSWVKELQRQANENIIIALAGNKLDLVTENPDKRAIA 146
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y+K G ++ETSA + ++++F ++K L
Sbjct: 147 TADAEAYAKEAGLLFFETSAKTNTNVKELFTAIAKKL 183
>gi|357491715|ref|XP_003616145.1| GTP binding protein [Medicago truncatula]
gi|355517480|gb|AES99103.1| GTP binding protein [Medicago truncatula]
Length = 200
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 98/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL++ + +V+ GNK DLE R+V EEA
Sbjct: 79 YYRGAAAAIIVYDITNLESFTRAKKWVQELQKQGNPNMVVAFAGNKADLEDKRKVTAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+F ++K L
Sbjct: 139 RVYAEENGLFFIETSAKTAANVNDIFYEIAKKL 171
>gi|321476259|gb|EFX87220.1| hypothetical protein DAPPUDRAFT_230436 [Daphnia pulex]
Length = 227
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 42 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 101
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F K WVKEL+R +V+ + GNK DL + R V +EA
Sbjct: 102 YRGAQAAIVVYDITNQDTFGRAKVWVKELQRQASPNIVIALAGNKADLAAKRAVEFDEAK 161
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+FL ++K L
Sbjct: 162 GYAEENGLLFMETSAKTAMNVNDIFLAIAKKL 193
>gi|328766761|gb|EGF76814.1| hypothetical protein BATDEDRAFT_37534 [Batrachochytrium
dendrobatidis JAM81]
Length = 245
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 100/151 (66%), Gaps = 1/151 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K + + +K ++WDTAGQERF S+APMY
Sbjct: 46 AVGKSSLVLRFVNNEFQENKEPTIGAAFLTQKCRLDDKIIKFEIWDTAGQERFHSLAPMY 105
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLES-SREVNREEA 234
YRNA AA++ +DIT+ S K WVKEL+R + +V+ +VGNK DL + +R V+ EEA
Sbjct: 106 YRNAQAAVVAYDITKPASLEKAKAWVKELQRQANPNIVIALVGNKLDLAATARGVSTEEA 165
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ G + E SA + + D+F +++K
Sbjct: 166 RAYATEGGLLFLEASAKTGEFVMDIFTDIAK 196
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K + + +K ++
Sbjct: 46 AVGKSSLVLRFVNNEFQENKEPTIGAAFLTQKCRLDDKIIKFEI 89
>gi|50291301|ref|XP_448083.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527394|emb|CAG61034.1| unnamed protein product [Candida glabrata]
Length = 208
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 105/153 (68%), Gaps = 3/153 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ FS + PTIGA+F T ++ + E+ VK ++WDTAGQERF S+APMY
Sbjct: 17 AVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTD-LE--SSREVNRE 232
YRNA AAL+V+D+T+ SF + WVKEL+ + +++ +VGNK D LE + R V+RE
Sbjct: 77 YRNAQAALVVYDVTKPQSFIKARHWVKELQEQASKDIIIALVGNKIDVLENGTERSVSRE 136
Query: 233 EAFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
EA ++ ++ETSA + I DVFL + +
Sbjct: 137 EAEKLAEEENLLFFETSAKSGENITDVFLAIGE 169
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ FS + PTIGA+F T ++ + E+ VK ++
Sbjct: 17 AVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVTINEHTVKFEI 60
>gi|392597767|gb|EIW87089.1| GTP-binding protein RAB5 [Coniophora puteana RWD-64-598 SS2]
Length = 224
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 105/169 (62%), Gaps = 17/169 (10%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVW-------------- 160
VGK+S+V+R++ F + TIGA+F T + + + VK ++W
Sbjct: 16 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDQTTVKFEIWYVSNKSPATYSSIF 75
Query: 161 --DTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVG 218
DTAGQER++S+APMYYRNAN A++V+DITQ S +TW++EL+R D +V+ + G
Sbjct: 76 DRDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLEKARTWIRELQRQADPSIVIALCG 135
Query: 219 NKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
NKTDL + R+V +EEA Y++ G + ETSA +G+ ++F ++K L
Sbjct: 136 NKTDLSARRQVTQEEAQKYAEEEGLMWGETSAKSGEGVSEIFTAIAKKL 184
>gi|221052324|ref|XP_002257738.1| Rab5c GTPase [Plasmodium knowlesi strain H]
gi|193807569|emb|CAQ38074.1| Rab5c GTPase, putative [Plasmodium knowlesi strain H]
Length = 213
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 111/180 (61%), Gaps = 5/180 (2%)
Query: 91 SDKFVVGLSINSRVPNCFEANWFWLG---VGKTSMVVRYIGKMFSHHISPTIGASFFTAK 147
SDK+ G + +S F + LG VGK+ +VVR+ F + TIGA+F T
Sbjct: 11 SDKYDGGSNYHSN--KIFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQL 68
Query: 148 INVGENKVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRN 207
I++GE +K ++WDTAGQER+RS+APMYYR A+AA++V+DIT SF K W+ ELK
Sbjct: 69 IDIGECTIKFEIWDTAGQERYRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSV 128
Query: 208 VDEPLVLCVVGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++ + GNK DLE +R V+RE A ++ S + ETSA Q + ++FL ++K L
Sbjct: 129 HSNDIIIALAGNKKDLEKNRVVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKL 188
>gi|443707017|gb|ELU02811.1| hypothetical protein CAPTEDRAFT_227582 [Capitella teleta]
Length = 210
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 101/169 (59%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 29 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 88
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F KTWV+EL+R +V+ + GNK DL + R V EEA
Sbjct: 89 YRGAQAAIVVYDITNQDTFGRAKTWVRELQRQASPNIVIALAGNKADLANKRMVEYEEAQ 148
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYD 284
Y++ + ETSA + D+FL ++K L Q S R D
Sbjct: 149 AYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPKNEQAGQQQSRQRGVD 197
>gi|340378375|ref|XP_003387703.1| PREDICTED: ras-related protein Rab-5C-like [Amphimedon
queenslandica]
Length = 221
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 98/152 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T +N+ + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVNLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V ++A
Sbjct: 91 YRGAQAAIVVYDITNQDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRMVEYDDAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + ++FL ++K L
Sbjct: 151 AYAEENSLLFMETSAKTAMNVNEIFLAIAKKL 182
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + TIGA+F T +N+ + VK ++
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVNLDDTTVKFEI 74
>gi|328790844|ref|XP_003251474.1| PREDICTED: ras-related protein Rab-5B-like [Apis mellifera]
Length = 221
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 100/158 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F +TWVKEL+R +V+ + GNK DL + R V +EA
Sbjct: 90 YRGAQAAIVVYDITNQDTFVRAQTWVKELQRQASPSIVIALAGNKADLANKRIVEFDEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQE 273
Y+ G + ETSA + D+FL + K ++ +QE
Sbjct: 150 TYADENGLLFMETSAKTAMNVNDIFLAIGKIILMNNQE 187
>gi|344230490|gb|EGV62375.1| GTP-binding protein of the rab/ypt family [Candida tenuis ATCC
10573]
Length = 218
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 101/159 (63%), Gaps = 7/159 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK--VKLQVWDTAGQERFRSMAP 173
VGK+S+V R++ F + TIGA+F T I + E+K +K ++WDTAGQER++S+AP
Sbjct: 22 AVGKSSIVHRFVKNTFDNFRESTIGAAFLTQTITLPESKTTIKFEIWDTAGQERYKSLAP 81
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNA+AAL V+DIT SF + W+KELK+ E +V+C+VGNK DL R+V+ +E
Sbjct: 82 MYYRNAHAALCVYDITNPSSFTKAQDWIKELKKQAPEGIVICLVGNKLDLSEERQVDEQE 141
Query: 234 AFHYSKSIGGT-----YYETSALQDQGIEDVFLNVSKGL 267
Y + + + E SA +G+ D+F + + L
Sbjct: 142 VLQYVQELNHQENNVLWAECSAKSGEGVLDIFNKIGRAL 180
>gi|123486982|ref|XP_001324836.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736288|gb|AAX97473.1| small Rab GTPase RabD3 [Trichomonas vaginalis]
gi|121907726|gb|EAY12613.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 199
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 93/145 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+V +Y+ I PT+G++FFT +I + ++L +WDTAGQE +R +APMY
Sbjct: 17 GVGKTSIVAQYVSGSTPDSIKPTVGSAFFTKEITMSGRPLELLIWDTAGQEVYRGLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+A A++VFDIT SF ++ W+KEL NVD L + V GNKTDLE +R V E
Sbjct: 77 YRSAKIAIIVFDITSAKSFESVSYWIKELTENVDGNLTIVVCGNKTDLEEARAVTPEIVQ 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVF 260
+ + Y ETSA QGI+ +F
Sbjct: 137 RKIEQVNAFYVETSATNGQGIDRLF 161
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKL 381
GVGKTS+V +Y+ I PT+G++FFT +I + ++L
Sbjct: 17 GVGKTSIVAQYVSGSTPDSIKPTVGSAFFTKEITMSGRPLEL 58
>gi|223994599|ref|XP_002286983.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|220978298|gb|EED96624.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
Length = 208
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 98/155 (63%), Gaps = 5/155 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG-----ENKVKLQVWDTAGQERFRS 170
GVGK+S+ +R++ + F + TIGASF K + + + ++WDTAGQE++RS
Sbjct: 23 GVGKSSLALRFVTEKFRPYSEATIGASFIPKKQSTSFGTQQQRHIGFKIWDTAGQEKYRS 82
Query: 171 MAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVN 230
+APMYYR A+AA+LV+DIT SFAA+K W ELK+N LVL V GNK DL R V
Sbjct: 83 LAPMYYRGASAAILVYDITNPSSFAALKDWASELKQNGPSDLVLVVCGNKLDLIEYRSVG 142
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
R Y+ IG Y E SA +G+E++F +V++
Sbjct: 143 RSVGEEYAAGIGAMYVEASAKDGKGVENMFTDVAR 177
>gi|301097172|ref|XP_002897681.1| Rab21/Rab5 family GTPase, putative [Phytophthora infestans T30-4]
gi|262106702|gb|EEY64754.1| Rab21/Rab5 family GTPase, putative [Phytophthora infestans T30-4]
Length = 224
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 105/157 (66%), Gaps = 7/157 (4%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-----KVKLQVWDTAGQERFRSM 171
VGKTS+ +RY FS S TIGASF ++ VG++ K+ LQ+WDTAGQERFRSM
Sbjct: 18 VGKTSITMRYCHGSFSTPTSATIGASFLQKRVIVGDDSGTRRKLTLQIWDTAGQERFRSM 77
Query: 172 APMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNR 231
APMYYRNA AA+LVFD+ SF IK W+++L+ +V + +VL VVGNK+D+ S+ + +
Sbjct: 78 APMYYRNAKAAILVFDLQSEASFEKIKEWLQDLQHHVGDDIVLAVVGNKSDVTSNFDFAK 137
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+ F + IG + TSA +G++ +F +++ L+
Sbjct: 138 AQQF--ADEIGALVFRTSAKTGEGVQSLFESLAVQLL 172
>gi|156838802|ref|XP_001643100.1| hypothetical protein Kpol_1029p16 [Vanderwaltozyma polyspora DSM
70294]
gi|156113693|gb|EDO15242.1| hypothetical protein Kpol_1029p16 [Vanderwaltozyma polyspora DSM
70294]
Length = 211
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 101/155 (65%), Gaps = 3/155 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ FS + PTIGA+F T ++N+ ++ VK ++WDTAGQERF S+APMY
Sbjct: 17 AVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNIDDHTVKFEIWDTAGQERFASLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL---ESSREVNRE 232
YRNA AAL+V+D+++ SF + WVKEL+ +++ + GNK D+ R+V E
Sbjct: 77 YRNAQAALVVYDVSKPQSFIKARHWVKELQERASSDIIIALAGNKVDIVEDGGERKVATE 136
Query: 233 EAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
E + G ++ETSA Q + +VFL + + +
Sbjct: 137 EGQKLADEEGLLFFETSAKTGQNVNEVFLAIGEKI 171
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 32/44 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ FS + PTIGA+F T ++N+ ++ VK ++
Sbjct: 17 AVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNIDDHTVKFEI 60
>gi|85115075|ref|XP_964811.1| Rab5-like protein ypt5 [Neurospora crassa OR74A]
gi|28926605|gb|EAA35575.1| Rab5-like protein ypt5 [Neurospora crassa OR74A]
gi|38636468|emb|CAE82003.1| probable GTP-binding protein ypt5 [Neurospora crassa]
gi|350295957|gb|EGZ76934.1| putative GTP-binding protein ypt5 [Neurospora tetrasperma FGSC
2509]
Length = 220
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I + EN VK ++WDTAGQER++S+APM
Sbjct: 29 AVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTIALDENTTVKFEIWDTAGQERYKSLAPM 88
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +++ + GNK DL R +
Sbjct: 89 YYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLDLVQEQPDKRAIQ 148
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y+K G ++ETSA + ++++F ++K L
Sbjct: 149 TADAQAYAKEAGLLFFETSAKTAENVQNLFTEIAKKL 185
>gi|168034319|ref|XP_001769660.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|162679009|gb|EDQ65461.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
Length = 201
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 98/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+ +R++ F + TIGA+F T + V E VK ++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSSLSLRFVRGQFFDYQESTIGAAFLTQTLAVNETTVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL+R + LV+ + GNK DL + R+V EE
Sbjct: 79 YYRGAAAAIIVYDITNSDSFGRAKKWVQELQRQGNPNLVMALAGNKADLSAKRKVEAEEG 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA Q + ++F +++ L
Sbjct: 139 QSYAEENGLFFMETSAKTAQNVNELFYEIARKL 171
>gi|12311678|emb|CAC24474.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 196
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 99/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 15 MGAGKSSLVLRFVKGQFLEFQVSTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 74
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL++ + +V+ + GNK DLE R+V EEA
Sbjct: 75 YYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVTAEEA 134
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + DVF ++K L
Sbjct: 135 RVYAEENGLFFMETSAKTAANVNDVFHEIAKRL 167
>gi|327278061|ref|XP_003223781.1| PREDICTED: ras-related protein Rab-22A-like [Anolis carolinensis]
Length = 194
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 100/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV ++A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLNDVREVMEKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAVFVETSAKNAININELFIEISR 164
>gi|388501294|gb|AFK38713.1| unknown [Medicago truncatula]
Length = 208
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 98/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL++ + +V+ GNK DLE R+V EEA
Sbjct: 79 YYRGAAAAIIVYDITNLESFTRAKKWVQELQKQGNPNMVVAFAGNKADLEDKRKVTAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+F ++K L
Sbjct: 139 RVYAEENGLFFIETSAKTAANVNDIFYEIAKKL 171
>gi|169596668|ref|XP_001791758.1| hypothetical protein SNOG_01101 [Phaeosphaeria nodorum SN15]
gi|111071476|gb|EAT92596.1| hypothetical protein SNOG_01101 [Phaeosphaeria nodorum SN15]
Length = 222
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I + EN VK ++WDTAGQER++S+APM
Sbjct: 30 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEIWDTAGQERYKSLAPM 89
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL--ES--SREVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL ES R +
Sbjct: 90 YYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNKLDLVTESPDKRAIQ 149
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + + ++F ++K L
Sbjct: 150 TADAEQYAREAGLLFFETSAKTSENVRELFTAIAKKL 186
>gi|225713422|gb|ACO12557.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
gi|290462345|gb|ADD24220.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
gi|290561497|gb|ADD38149.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
Length = 216
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T I + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTICLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+D+T SF K WVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 91 YRGAQAAIVVYDVTNQDSFIRAKNWVKELQRQASPNIVIALAGNKADLNTKRLVIYEEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + DVFL ++K L
Sbjct: 151 TYAEENGLLFMETSAKTALNVNDVFLEIAKKL 182
>gi|409083629|gb|EKM83986.1| hypothetical protein AGABI1DRAFT_110587 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 209
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 118/189 (62%), Gaps = 11/189 (5%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER++S+APM
Sbjct: 16 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDQTTVKFEIWDTAGQERYKSLAPM 75
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYRNAN A++V+DITQ S +TW++EL+R D +V+ + GNK+DL++ R+V +EEA
Sbjct: 76 YYRNANCAVVVYDITQSSSLEKARTWIRELQRQADPNIVITLCGNKSDLDARRQVTQEEA 135
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHT--------SSLRVYDSD 286
Y++ G + ETSA +G+ +VF ++K L + S + + + D D
Sbjct: 136 KKYAEEEGLMWAETSAKSGEGVTEVFTAIAKKLPLTASPSARSGAGSRTGPGARQGVDLD 195
Query: 287 NITSANPRG 295
ANPRG
Sbjct: 196 R--QANPRG 202
>gi|357627683|gb|EHJ77299.1| small GTP binding protein RAB5 [Danaus plexippus]
Length = 209
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F K WVKEL+R +V+ + GNK+DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G + ETSA + D+FL ++ L
Sbjct: 150 AYADENGLLFMETSAKTAMNVNDIFLAIANKL 181
>gi|116779293|gb|ABK21222.1| unknown [Picea sitchensis]
gi|116790907|gb|ABK25786.1| unknown [Picea sitchensis]
Length = 200
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 100/153 (65%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F + TIGA+FF+ + V E VK ++WDTAGQER+ S+APM
Sbjct: 19 MGTGKSSLVLRFVKGQFLDYQESTIGAAFFSQTLAVNEVTVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV EL++ + LV+ + GNK D+ + R+V EEA
Sbjct: 79 YYRGAAAAIIVYDITNSDSFVRAKNWVLELQKQGNPNLVMALAGNKADVAAKRKVEAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+K G + ETSA Q + ++F +++ L
Sbjct: 139 ETYAKENGLFFMETSAKTAQNVNELFYEIARRL 171
>gi|410896506|ref|XP_003961740.1| PREDICTED: ras-related protein Rab-5B-like [Takifugu rubripes]
Length = 216
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 96/153 (62%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+ VGK+S+V+R++ F TIGA+F + + + VK ++WDTAGQER+ S+APM
Sbjct: 30 MAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPM 89
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++VFDIT+ +F K WVKEL+R +V+ + GNK DL R V EEA
Sbjct: 90 YYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGNKADLAERRLVEFEEA 149
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+FL ++K +
Sbjct: 150 QTYAEDTGLLFMETSAKTAMNVNDLFLAIAKKM 182
>gi|71894915|ref|NP_001026038.1| ras-related protein Rab-22A [Gallus gallus]
gi|53130292|emb|CAG31475.1| hypothetical protein RCJMB04_6n2 [Gallus gallus]
Length = 194
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 100/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV ++A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLNDVREVMEKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|408400098|gb|EKJ79185.1| hypothetical protein FPSE_00660 [Fusarium pseudograminearum CS3096]
Length = 220
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 104/157 (66%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 29 AVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 88
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +V+ + GNK DL + R ++
Sbjct: 89 YYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIVIALAGNKLDLVTEQPDKRAIS 148
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + ++ +F ++K L
Sbjct: 149 TADAEAYAREAGLLFFETSAKTAENVQTLFTAIAKKL 185
>gi|330936207|ref|XP_003305289.1| hypothetical protein PTT_18094 [Pyrenophora teres f. teres 0-1]
gi|311317754|gb|EFQ86627.1| hypothetical protein PTT_18094 [Pyrenophora teres f. teres 0-1]
Length = 220
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 105/157 (66%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I + EN VK ++WDTAGQER++S+APM
Sbjct: 28 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEIWDTAGQERYKSLAPM 87
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL--ES--SREVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL ES R ++
Sbjct: 88 YYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNKLDLVTESPDKRAIS 147
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + ++++F ++K L
Sbjct: 148 TADAEQYAREAGLLFFETSAKTCENVKELFTAIAKKL 184
>gi|291001341|ref|XP_002683237.1| rab family small GTPase [Naegleria gruberi]
gi|284096866|gb|EFC50493.1| rab family small GTPase [Naegleria gruberi]
Length = 213
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 99/151 (65%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + +G+ VK ++WDTAGQER++S+APMYY
Sbjct: 25 VGKSSLVLRFVRGQFFEYQESTIGAAFLTQTVPLGDTIVKFEIWDTAGQERYKSLAPMYY 84
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT SF K WVKEL+R +V+ + GNK DLE R+V EA
Sbjct: 85 RGAAAAIVVYDITSADSFQRAKNWVKELQRQGTTNIVIALAGNKVDLEDKRQVESAEAKS 144
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + ++F+ +++ L
Sbjct: 145 YAEDNGLLFMETSAKAATNVNELFVAIARKL 175
>gi|402222754|gb|EJU02820.1| GTP-binding protein RAB5 [Dacryopinax sp. DJM-731 SS1]
Length = 208
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER++S+APM
Sbjct: 16 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVQLEDGTTVKFEIWDTAGQERYKSLAPM 75
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR+A A+ V+DITQ S K+W++EL+R D +V+ + GNK+DL + R+V++EEA
Sbjct: 76 YYRSAACAICVYDITQSASLEKAKSWIRELQRQADPSIVIALCGNKSDLAARRQVSQEEA 135
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++ G + ETSA +G+ ++F ++ L
Sbjct: 136 QKFAEEEGLMWCETSAKTGEGVNEIFDRIAHKL 168
>gi|345481047|ref|XP_001603985.2| PREDICTED: ataxin-2-like protein-like [Nasonia vitripennis]
Length = 815
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 106/167 (63%), Gaps = 10/167 (5%)
Query: 413 MNNNNKKKNRVATTGRPVRSRGGPDRLAINPEGVYCNARFMQAITLHIGDKVTVYTVHGK 472
MN NK+ N R R+RG +R + +GVY NA FM AIT H+G+ V + T +G
Sbjct: 1 MNKRNKRSNPT----RSPRARGPQERSVLA-DGVYNNAHFMHAITSHVGNIVQIQTQNGS 55
Query: 473 QFEGYLKTFSKQFELVISMTHQVDPENPQCIDPNTVVDMKIFKLDDIVRIEAKNVDLEYA 532
+EG +TFS QFE+V+ M H+V+ +D +VV+ IFK DI+ + A++VDL+YA
Sbjct: 56 IYEGVFRTFSSQFEVVLEMAHRVESSGKMSVD--SVVEKLIFKPQDIITLSARDVDLDYA 113
Query: 533 VRDTFATDTAISKFNGVI-GERELEPWAEDMLGPGGDDDFELDQMCN 578
RDTF TDTAISKFNG+I G++EL+PW D G + ELD+ N
Sbjct: 114 TRDTFQTDTAISKFNGIIKGKKELQPW--DETGTSNGANLELDRTAN 158
>gi|1370178|emb|CAA98166.1| RAB5A [Lotus japonicus]
gi|388504250|gb|AFK40191.1| unknown [Lotus japonicus]
Length = 200
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 99/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL++ + +V+ GNK+DLE R+V +EA
Sbjct: 79 YYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMAFAGNKSDLEDKRKVTADEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + DVF ++K L
Sbjct: 139 RVYAEENGLFFMETSAKTAANVNDVFYEIAKRL 171
>gi|449274250|gb|EMC83533.1| Ras-related protein Rab-22A [Columba livia]
Length = 194
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 100/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV ++A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLNDVREVMEKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|452988143|gb|EME87898.1| hypothetical protein MYCFIDRAFT_70384 [Pseudocercospora fijiensis
CIRAD86]
Length = 222
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I + E VK ++WDTAGQER++S+APM
Sbjct: 26 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDTAGQERYKSLAPM 85
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL + R V+
Sbjct: 86 YYRNANCAVVVYDITQAASLEKAKAWVKELQRQANENIIIALAGNKADLVAEQPDKRAVS 145
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y+K G ++ETSA + ++++F ++K L
Sbjct: 146 TADAEAYAKEAGLLFFETSAKTAENVKELFTAIAKKL 182
>gi|400977|sp|P31583.1|RHN1_NICPL RecName: Full=Ras-related protein RHN1
gi|19691|emb|CAA46112.1| small GTP binding protein [Nicotiana plumbaginifolia]
Length = 200
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 99/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF++ + V VK ++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAVNNATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SFA K WV+EL++ + +V+ + GNK DLE R+V EEA
Sbjct: 79 YYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMALAGNKADLEDRRKVTAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + +F ++K L
Sbjct: 139 RLYAEENGLFFMETSAKTAVNVNAIFYEIAKRL 171
>gi|242808404|ref|XP_002485155.1| RAB GTPase Ypt5, putative [Talaromyces stipitatus ATCC 10500]
gi|218715780|gb|EED15202.1| RAB GTPase Ypt5, putative [Talaromyces stipitatus ATCC 10500]
Length = 218
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 104/157 (66%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 27 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 86
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +++ + GNK DL + R +
Sbjct: 87 YYRNANCAVVVYDITQSASLDKAKSWVKELQRQANENIIIALAGNKLDLVTENPDKRAIA 146
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y+K G ++ETSA ++++F ++K L
Sbjct: 147 TADAEAYAKEAGLLFFETSAKTTTNVKELFTAIAKKL 183
>gi|126139533|ref|XP_001386289.1| Rab5-like GTPase [Scheffersomyces stipitis CBS 6054]
gi|126093571|gb|ABN68260.1| Rab5-like GTPase [Scheffersomyces stipitis CBS 6054]
Length = 215
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 99/155 (63%), Gaps = 7/155 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K +GE +K ++WDTAGQERF S+APMY
Sbjct: 19 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQERFASLAPMY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL-------ESSRE 228
YRNA AA++V+DIT+ SF + WVKEL + + + +VGNK DL ES R+
Sbjct: 79 YRNAQAAIVVYDITKPASFIKARHWVKELHEQASKDITIALVGNKYDLVEDDTEEESLRK 138
Query: 229 VNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNV 263
V+ EE ++ G ++ETSA + DVF+ +
Sbjct: 139 VSVEEGKGLAEEEGLLFFETSAKTSYNVNDVFIGI 173
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K +GE +K ++
Sbjct: 19 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEI 62
>gi|224078511|ref|XP_002199135.1| PREDICTED: ras-related protein Rab-22A [Taeniopygia guttata]
Length = 194
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 100/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV ++A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLNDVREVMEKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|366990719|ref|XP_003675127.1| hypothetical protein NCAS_0B06720 [Naumovozyma castellii CBS 4309]
gi|342300991|emb|CCC68756.1| hypothetical protein NCAS_0B06720 [Naumovozyma castellii CBS 4309]
Length = 212
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 110/175 (62%), Gaps = 4/175 (2%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ FS + PTIGA+F T ++N+ +N VK ++WDTAGQERF S+APMY
Sbjct: 17 AVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNINDNTVKFEIWDTAGQERFASLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVNR 231
YRNA AAL+V+D+T+ SF + W+KEL ++ +++ +VGNK D+ E R+V R
Sbjct: 77 YRNAQAALIVYDVTKPQSFIKARHWIKELHEQANKDMIIALVGNKVDVLENNEDERKVAR 136
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSD 286
EE ++ G ++ETSA + + F+ + + + + T S V SD
Sbjct: 137 EEGEKLAEEEGLLFFETSAKTGLNVTETFVAIGEKIPLKTAGDQETDSNGVAISD 191
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ FS + PTIGA+F T ++N+ +N VK ++
Sbjct: 17 AVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNINDNTVKFEI 60
>gi|225556792|gb|EEH05080.1| GTP-binding protein ypt5 [Ajellomyces capsulatus G186AR]
gi|240281654|gb|EER45157.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325087805|gb|EGC41115.1| GTP-binding protein ypt5 [Ajellomyces capsulatus H88]
Length = 217
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 27 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 86
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +V+ + GNK DL + R +
Sbjct: 87 YYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTDSPDKRAIQ 146
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + ++F ++K L
Sbjct: 147 TVDAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKL 183
>gi|340718353|ref|XP_003397633.1| PREDICTED: ras-related protein Rab-5C-like [Bombus terrestris]
gi|350401655|ref|XP_003486219.1| PREDICTED: ras-related protein Rab-5C-like [Bombus impatiens]
Length = 214
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F +TWVKEL+R +V+ + GNK DL + R V +EA
Sbjct: 90 YRGAQAAIVVYDITNQDTFVRAQTWVKELQRQASPSIVIALAGNKADLSNKRVVEFDEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G + ETSA + D+FL ++K L
Sbjct: 150 TYADENGLLFMETSAKTAMNVNDIFLAIAKKL 181
>gi|62740107|gb|AAH94134.1| Unknown (protein for MGC:115056) [Xenopus laevis]
Length = 213
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 98/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+ VGK+S+V+R++ F + TIGA+F + + + VK ++WDTAGQER+ S+APM
Sbjct: 28 MAVGKSSLVLRFVKGQFDEYQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPM 87
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++VFDIT+ +F K WVKEL+R +V+ + GNK+DL R V EEA
Sbjct: 88 YYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDLAEKRMVEYEEA 147
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + ++FL ++K +
Sbjct: 148 QTYAEDTGLLFMETSAKTAMNVNELFLAIAKKM 180
>gi|367018094|ref|XP_003658332.1| hypothetical protein MYCTH_2293959 [Myceliophthora thermophila ATCC
42464]
gi|347005599|gb|AEO53087.1| hypothetical protein MYCTH_2293959 [Myceliophthora thermophila ATCC
42464]
Length = 219
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 105/157 (66%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 28 AVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 87
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +++ + GNK DL + R +
Sbjct: 88 YYRNANCAVVVYDITQATSLDKAKSWVKELQRQANENIIIALAGNKLDLVTEQPDKRAIE 147
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + ++++F ++K L
Sbjct: 148 TADAEAYAREAGLLFFETSAKTAENVQELFTAIAKKL 184
>gi|340897464|gb|EGS17054.1| hypothetical protein CTHT_0073810 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 219
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 105/157 (66%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 27 AVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 86
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +++ + GNK DL + R V
Sbjct: 87 YYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLDLVADNPDKRAVQ 146
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + ++++F +++ L
Sbjct: 147 TADAEAYAREAGLLFFETSAKTAENVQELFTAIARKL 183
>gi|297738167|emb|CBI27368.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 104/168 (61%), Gaps = 10/168 (5%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SFA K WV+EL++ + +V+ + GNK DLE R+V EEA
Sbjct: 79 YYRGAAAAIIVYDITSTESFARAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVTAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNV----------SKGLICLSQ 272
Y++ G + ETSA + D F + ++GLI ++Q
Sbjct: 139 RVYAEENGLFFTETSAKTAVNVNDTFYEIVVSPVVSQLPNRGLIQIAQ 186
>gi|255626087|gb|ACU13388.1| unknown [Glycine max]
Length = 204
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 98/151 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL++ + +V+ + GNK DLE R+V EEA
Sbjct: 79 YYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVTAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++ G + ETSA + D+F ++K
Sbjct: 139 RVYAEENGLFFMETSAKTASNVNDIFYEIAK 169
>gi|7767071|pdb|1EK0|A Chain A, Gppnhp-Bound Ypt51 At 1.48 A Resolution
Length = 170
Score = 142 bits (358), Expect = 6e-31, Method: Composition-based stats.
Identities = 66/153 (43%), Positives = 100/153 (65%), Gaps = 3/153 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F+ + PTIGA+F T ++ + E+ VK ++WDTAGQERF S+AP Y
Sbjct: 13 AVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPXY 72
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL---ESSREVNRE 232
YRNA AAL+V+D+T+ SF + WVKEL + +++ +VGNK D R+V RE
Sbjct: 73 YRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDXLQEGGERKVARE 132
Query: 233 EAFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
E ++ G ++ETSA + + DVFL + +
Sbjct: 133 EGEKLAEEKGLLFFETSAKTGENVNDVFLGIGE 165
Score = 44.7 bits (104), Expect = 0.14, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F+ + PTIGA+F T ++ + E+ VK ++
Sbjct: 13 AVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEI 56
>gi|112983262|ref|NP_001037614.1| small GTP binding protein RAB5 [Bombyx mori]
gi|99082892|gb|ABF66621.1| small GTP binding protein RAB5 [Bombyx mori]
Length = 213
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 95/152 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T I + VK ++WDTAGQER+ S+APMY
Sbjct: 32 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEIWDTAGQERYHSLAPMY 91
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A +A++V+DIT +F K WVKEL+R +V+ + GNK+DL + R V EEA
Sbjct: 92 YRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQ 151
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G + ETSA + D+FL ++ L
Sbjct: 152 AYADENGLLFMETSAKTAMNVNDIFLAIANKL 183
>gi|344237137|gb|EGV93240.1| Ras-related protein Rab-22A [Cricetulus griseus]
Length = 254
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 100/152 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 75 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 134
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WV+EL+++ +V+ + GNK DL REV +A
Sbjct: 135 YRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERDAK 194
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ SI + ETSA I ++F+ +S+ +
Sbjct: 195 DYADSIHAIFVETSAKNAININELFIEISRRI 226
>gi|149030014|gb|EDL85106.1| RAB22A, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
gi|165971249|gb|AAI58651.1| Rab22a protein [Rattus norvegicus]
Length = 194
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 100/152 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WV+EL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ SI + ETSA I ++F+ +S+ L
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISRRL 166
>gi|6010031|emb|CAB57219.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 99/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLVVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL++ + +V+ + GNK DLE R+V EEA
Sbjct: 79 YYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVTVEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + DVF ++K L
Sbjct: 139 RVYAEENGLFFMETSAKTAANVNDVFHEIAKRL 171
>gi|448087841|ref|XP_004196426.1| Piso0_005889 [Millerozyma farinosa CBS 7064]
gi|359377848|emb|CCE86231.1| Piso0_005889 [Millerozyma farinosa CBS 7064]
Length = 223
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 100/159 (62%), Gaps = 7/159 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK--VKLQVWDTAGQERFRSMAP 173
VGK+S+V R++ F TIGA+F T + + E VK ++WDTAGQER++S+AP
Sbjct: 26 AVGKSSIVHRFVKNSFDDMRESTIGAAFLTQSVKLPEKSATVKFEIWDTAGQERYKSLAP 85
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNANAAL V+DIT SF + W+KELK+ E + +C+VGNKTD++ REVN+EE
Sbjct: 86 MYYRNANAALCVYDITSRSSFNRAQEWIKELKKQAPENITICLVGNKTDMQEEREVNQEE 145
Query: 234 AFHYSKSIG--GTYY---ETSALQDQGIEDVFLNVSKGL 267
Y + GT E SA G+ ++F +++ L
Sbjct: 146 VDEYITQLQNEGTILISGECSAKSGDGVLEIFTHIANAL 184
>gi|148232808|ref|NP_001084521.1| RAB5B, member RAS oncogene family [Xenopus laevis]
gi|46250314|gb|AAH68736.1| MGC81204 protein [Xenopus laevis]
Length = 185
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 94/150 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL S R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALSGNKADLTSKRMVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ + ETSA + D+FL + K
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIGK 179
>gi|380019933|ref|XP_003693855.1| PREDICTED: ras-related protein Rab-5C-like [Apis florea]
Length = 214
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F +TWVKEL+R +V+ + GNK DL + R V +EA
Sbjct: 90 YRGAQAAIVVYDITNQDTFVRAQTWVKELQRQASPSIVIALAGNKADLANKRIVEFDEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G + ETSA + D+FL ++K L
Sbjct: 150 TYADENGLLFMETSAKTAMNVNDIFLAIAKKL 181
>gi|440635533|gb|ELR05452.1| rab family, other [Geomyces destructans 20631-21]
Length = 219
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 102/157 (64%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGE-NKVKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ E VK ++WDTAGQER++S+APM
Sbjct: 28 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDEATTVKFEIWDTAGQERYKSLAPM 87
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL + R +
Sbjct: 88 YYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIIIALAGNKLDLVTEQQDKRVIQ 147
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y+K G ++ETSA + + ++F ++K L
Sbjct: 148 TADAEAYAKEAGLLFFETSAKTSENVRELFTAIAKKL 184
>gi|268532416|ref|XP_002631336.1| C. briggsae CBR-RAB-21 protein [Caenorhabditis briggsae]
Length = 206
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 111/175 (63%), Gaps = 5/175 (2%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ FS TI ASF + V + K +L +WDTAGQE++ ++ P+YY
Sbjct: 21 VGKSSLVLRFVENKFSTRHLSTIQASFQNKTVQVDDCKAELHIWDTAGQEKYHALGPIYY 80
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R +N LLVFDIT+ SF +K WV E+K + + + +VGNK DL+ R+V+R+EA
Sbjct: 81 RGSNGVLLVFDITEQRSFKKVKNWVLEIKTCLGKTAEILIVGNKIDLDDERQVSRQEAES 140
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQES-----LHTSSLRVYDSD 286
Y++S G Y ETSA +++GI + F +++ +I S+ + L S+R+ D +
Sbjct: 141 YAESEGALYMETSAQENRGISEAFTALTEKMIQHSRTATAEAPLSNRSIRLIDEE 195
>gi|402083928|gb|EJT78946.1| GTP-binding protein ypt5 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 221
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 104/157 (66%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 29 AVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 88
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL + R V+
Sbjct: 89 YYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVTEQPDKRAVS 148
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + + ++F ++K L
Sbjct: 149 TADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKL 185
>gi|45185604|ref|NP_983320.1| ACL084Cp [Ashbya gossypii ATCC 10895]
gi|44981322|gb|AAS51144.1| ACL084Cp [Ashbya gossypii ATCC 10895]
gi|374106525|gb|AEY95434.1| FACL084Cp [Ashbya gossypii FDAG1]
Length = 207
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 103/153 (67%), Gaps = 3/153 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ FS + PTIGA+F T ++N+ +K ++WDTAGQERF S+APMY
Sbjct: 17 AVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNMDSKTIKFEIWDTAGQERFASLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL---ESSREVNRE 232
YRNA AAL+V+DIT+ SF + WVKEL + +V+ +VGNK DL +R+V+RE
Sbjct: 77 YRNAQAALVVYDITKPQSFIKARHWVKELHEQASKGIVIALVGNKLDLLENGEARKVSRE 136
Query: 233 EAFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
EA ++ G ++ETSA I +VFL + +
Sbjct: 137 EAEKLAEEEGLLFFETSAKTGDKINEVFLAIGE 169
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ FS + PTIGA+F T ++N+ +K ++
Sbjct: 17 AVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNMDSKTIKFEI 60
>gi|363807594|ref|NP_001242153.1| uncharacterized protein LOC100791620 [Glycine max]
gi|255642884|gb|ACU22609.1| unknown [Glycine max]
Length = 200
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 98/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+ +V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSGLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL++ + +V+ + GNK DLE R+V EEA
Sbjct: 79 YYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVTAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+F ++K L
Sbjct: 139 RVYAEENGLFFMETSAKTASNVNDIFYEIAKRL 171
>gi|312067383|ref|XP_003136717.1| Rab5 [Loa loa]
Length = 221
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SF K WVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQESFTKAKNWVKELQRQASPNIVIALSGNKADLANKRVVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + D+FL ++K L
Sbjct: 150 AYAEDNALLFMETSAKTAMNVNDIFLAIAKKL 181
>gi|56118881|ref|NP_001008068.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51703418|gb|AAH80959.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267359|emb|CAJ83124.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 107/178 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL S R V+ +EA
Sbjct: 91 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLASKRAVDFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
Y+ + ETSA + ++F+ ++K L ++ ++++R D +A P
Sbjct: 151 AYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKTEPQAGGSNTIRGRGVDLTETAQP 208
>gi|406864129|gb|EKD17175.1| Rab5-like protein ypt5 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 220
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 104/156 (66%), Gaps = 5/156 (3%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T I++ +N VK ++WDTAGQER++S+APMY
Sbjct: 30 VGKSSLVLRFVKDQFDDFRESTIGAAFLTQTISLDDNTTVKFEIWDTAGQERYKSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVNR 231
YRNAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL ++ R +
Sbjct: 90 YRNANCAVVVYDITQASSLDKAKQWVKELQRQANENIIIALAGNKLDLVTAQPDKRAITT 149
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y+K G ++ETSA + + ++F +++K L
Sbjct: 150 ADAEAYAKEAGLLFFETSAKTSENVRELFTSIAKKL 185
>gi|397569787|gb|EJK46965.1| hypothetical protein THAOC_34347 [Thalassiosira oceanica]
Length = 206
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 104/164 (63%), Gaps = 12/164 (7%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+ +VVR++ F PTIGA+F T + + + VK ++WDTAGQER+RS+APMY
Sbjct: 18 AVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDDATVKFEIWDTAGQERYRSLAPMY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVV------------GNKTDL 223
YR A AA++V+DIT SFA K+WVKEL+R D+ +V+ ++ GNK DL
Sbjct: 78 YRGAAAAIIVYDITNPDSFAGAKSWVKELQRRGDQNVVIAMLTGSESDLITRQAGNKADL 137
Query: 224 ESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
E+ R+V+ EA Y++ G + ETSA ++ +F+ ++K L
Sbjct: 138 EARRKVDFNEANDYAEENGILHMETSAKNANNVKSLFVEIAKKL 181
>gi|241950447|ref|XP_002417946.1| RAB family GTPase, putative [Candida dubliniensis CD36]
gi|223641284|emb|CAX45664.1| RAB family GTPase, putative [Candida dubliniensis CD36]
Length = 221
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 97/159 (61%), Gaps = 7/159 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK--VKLQVWDTAGQERFRSMAP 173
VGK+S+V R++ F TIGA+F T I + E++ +K ++WDTAGQER++S+AP
Sbjct: 22 AVGKSSIVHRFVKNTFDDMRESTIGAAFLTQTITIPESETTIKFEIWDTAGQERYKSLAP 81
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNANAAL V+DIT SF + W+KELKR E +V+ +VGNK+DL+ REV E
Sbjct: 82 MYYRNANAALCVYDITSRSSFQKAQDWIKELKRQAPEGIVIALVGNKSDLDDEREVESSE 141
Query: 234 AFHYSKSIGGTY-----YETSALQDQGIEDVFLNVSKGL 267
Y + G E SA G+ DVF + + L
Sbjct: 142 VQEYVQEQNGDCCSIITAECSAKSGDGVLDVFNKIGRAL 180
>gi|72165047|ref|XP_783878.1| PREDICTED: ras-related protein Rab-5B-like [Strongylocentrotus
purpuratus]
Length = 216
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 30 VGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 89
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +F KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 RGAQAAIVVYDITNQETFGRAKTWVKELQRQASPNIVIALAGNKADLANKRMVEFEEAQA 149
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + D+FL ++K L
Sbjct: 150 YAEENSLLFMETSAKTAMNVNDIFLAIAKKL 180
>gi|427784931|gb|JAA57917.1| Putative ras-related protein rab-21 [Rhipicephalus pulchellus]
Length = 214
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 113/166 (68%), Gaps = 2/166 (1%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY+ F+ T+ AS+ ++N+ +V+L +WDTAGQE+F ++ P+YY
Sbjct: 23 VGKTSLVLRYVENKFNDKHLSTLQASYLDKRLNIAGERVQLAIWDTAGQEKFHALGPIYY 82
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R++N A+LV+DIT SF ++ WVKEL++ + + L + GNK DL+ R V+ EA
Sbjct: 83 RDSNGAVLVYDITDEGSFIKVQNWVKELRKMLGTDVCLTIAGNKVDLDKQRNVSAAEAEA 142
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLS--QESLHTSSL 280
Y+ S+G T++ TSA ++GI+D+FL++SK ++ ++ + H +SL
Sbjct: 143 YAASVGATHFHTSAKLNRGIDDLFLDLSKRMMQVANTNDEQHRNSL 188
>gi|393909277|gb|EFO27359.2| Ras-like protein Rab-5A [Loa loa]
Length = 217
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SF K WVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQESFTKAKNWVKELQRQASPNIVIALSGNKADLANKRVVEYEEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + D+FL ++K L
Sbjct: 150 AYAEDNALLFMETSAKTAMNVNDIFLAIAKKL 181
>gi|395334748|gb|EJF67124.1| GTP-binding protein RAB5 [Dichomitus squalens LYAD-421 SS1]
Length = 209
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 106/152 (69%), Gaps = 1/152 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-GENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER++S+APMY
Sbjct: 17 VGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLEDQTTVKFEIWDTAGQERYKSLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNAN A++V+DITQ S K+W++EL+R D +V+ + GNK DL + R+V++EEA
Sbjct: 77 YRNANCAVVVYDITQSTSLEKAKSWIRELQRQADPNIVIALCGNKLDLSARRQVSQEEAK 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA +G+ D+F +++K L
Sbjct: 137 KYAEEEGLMWGETSAKTGEGVSDIFTSIAKKL 168
>gi|37791225|gb|AAR03593.1| Rab5 [Leishmania donovani]
Length = 211
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 99/154 (64%), Gaps = 2/154 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPM 174
GVGK+S+V R + FS ++ T+GASFF NV ++ V +WDTAGQERF+S+A M
Sbjct: 30 GVGKSSVVQRLMKDAFSEKLNSTVGASFFRYTCNVDDDTAVHFDIWDTAGQERFKSLASM 89
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AAL+VFDI +F + W++EL+ N E +V+ +VGNK DLES R+V+ +A
Sbjct: 90 YYRGAAAALVVFDIVSADTFEKARYWIRELQANSSETVVM-LVGNKKDLESERQVSLADA 148
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+ +G Y+ETSA G+ D F V+ LI
Sbjct: 149 QQCAGEMGAMYHETSARSGDGVRDAFHAVAAKLI 182
>gi|449298295|gb|EMC94310.1| hypothetical protein BAUCODRAFT_544119 [Baudoinia compniacensis
UAMH 10762]
Length = 227
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 104/156 (66%), Gaps = 5/156 (3%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T I + + VK ++WDTAGQER++S+APMY
Sbjct: 29 VGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDDQTTVKFEIWDTAGQERYKSLAPMY 88
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVNR 231
YRNAN A++V+DITQ S K+WVKEL+R +E +++ + GNK DL S R + +
Sbjct: 89 YRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLDLAESDPSKRAIEK 148
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + ++++F ++K L
Sbjct: 149 ADAEAYAREAGLLFFETSAKTSENVKELFTAIAKKL 184
>gi|346467757|gb|AEO33723.1| hypothetical protein [Amblyomma maculatum]
Length = 214
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 102/148 (68%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+V+RY+ +FS T+ AS+ T ++ + + L +WDTAGQERF ++ P+YY
Sbjct: 59 VGKTSLVLRYVNNVFSEKQQATVQASYLTKRVVIEGVPITLAIWDTAGQERFHALGPIYY 118
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R+A+AALLV+D+T SF ++ WVKEL++ + +++ + NK+DL S++ + +EA
Sbjct: 119 RDADAALLVYDMTDNDSFVRVRKWVKELQQMASKTIIIAIAANKSDLVRSKKFDIQEAES 178
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVS 264
Y+ SIG + TSA +GI++VFL+++
Sbjct: 179 YAASIGARVFVTSAKSGEGIDEVFLDIA 206
>gi|71896201|ref|NP_001025576.1| muscle RAS oncogene homolog isoform 2 [Xenopus (Silurana)
tropicalis]
gi|309243097|ref|NP_001184079.1| muscle RAS oncogene homolog isoform 1 [Xenopus (Silurana)
tropicalis]
gi|60552032|gb|AAH91014.1| muscle RAS oncogene homolog [Xenopus (Silurana) tropicalis]
gi|89272803|emb|CAJ82337.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|115292132|gb|AAI21995.1| muscle RAS oncogene homolog [Xenopus (Silurana) tropicalis]
Length = 213
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 97/153 (63%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+ VGK+S+V+R++ F TIGA+F + + + VK ++WDTAGQER+ S+APM
Sbjct: 28 MAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPM 87
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++VFDIT+ +F K WVKEL+R +V+ + GNK+DL R V EEA
Sbjct: 88 YYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDLAEKRMVEYEEA 147
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + ++FL ++K +
Sbjct: 148 QAYAEDTGLLFMETSAKTAMNVNELFLAIAKKM 180
>gi|344296537|ref|XP_003419963.1| PREDICTED: ras-related protein Rab-22A-like [Loxodonta africana]
Length = 194
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPDIVVAIAGNKCDLIDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAVFVETSAKNAININELFIEISR 164
>gi|397525605|ref|XP_003832751.1| PREDICTED: ras-related protein Rab-22A-like [Pan paniscus]
Length = 219
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 22/197 (11%)
Query: 69 KKKTLIPYLEMLVSNKIKVGLLSDKFVVGLSINSRVPNCFEANWFWLGVGKTSMVVRYIG 128
+++ L P + ++KV LL D GVGK+S+V R++
Sbjct: 15 RRRALAPGSRAMALRELKVCLLGDT----------------------GVGKSSIVWRFVE 52
Query: 129 KMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDI 188
F +I+PTIGASF T + K +WDTAGQERFR++APMYYR + AA++V+DI
Sbjct: 53 DSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDI 112
Query: 189 TQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFHYSKSIGGTYYET 248
T+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A Y+ SI + ET
Sbjct: 113 TKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVET 172
Query: 249 SALQDQGIEDVFLNVSK 265
SA I ++F+ +S+
Sbjct: 173 SAKNAININELFIEISR 189
>gi|385302406|gb|EIF46539.1| rab gtpase [Dekkera bruxellensis AWRI1499]
Length = 208
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 99/150 (66%), Gaps = 1/150 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-GENKVKLQVWDTAGQERFRSMAPM 174
VGK+S+V R++ F+ TIGA+F T I++ + VK ++WDTAGQER+RS+A +
Sbjct: 24 AVGKSSIVQRFVKDSFNDFKESTIGAAFLTQTIDLDSDTTVKFEIWDTAGQERYRSLASI 83
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYRNA +AL+V+DITQ S K W+KEL++ +V+ +VGNKTDLE R++ EEA
Sbjct: 84 YYRNAQSALVVYDITQKASLDKAKYWIKELQKQASNNIVIALVGNKTDLEEERQIPTEEA 143
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVS 264
++ G ++E SA +GI+D F ++
Sbjct: 144 QAFANEAGLLFFEVSAKSGKGIKDCFREIA 173
>gi|441639329|ref|XP_003277577.2| PREDICTED: ras-related protein Rab-22A [Nomascus leucogenys]
Length = 250
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 71 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 130
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 131 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 190
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 191 DYADSIHAIFVETSAKNAININELFIEISR 220
>gi|151337003|gb|ABS00941.1| GTP-binding protein RAB5 [Lentinula edodes]
Length = 207
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 109/168 (64%), Gaps = 1/168 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-GENKVKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER++S+APM
Sbjct: 16 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLEDQTTVKFEIWDTAGQERYKSLAPM 75
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYRNAN A++V+DITQ S + W++EL+R D +V+ + GNK+DL + R+V+ EEA
Sbjct: 76 YYRNANCAVVVYDITQSASLEKARNWIRELQRQADPSIVIALCGNKSDLSARRQVSEEEA 135
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRV 282
Y++ G + ETSA +G+ ++F ++K L + S T + R
Sbjct: 136 KKYAEEEGLMWAETSAKTGEGVSEIFTAIAKKLPLTAPPSARTGAGRA 183
>gi|354468755|ref|XP_003496817.1| PREDICTED: ras-related protein Rab-22A-like [Cricetulus griseus]
Length = 191
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 100/152 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 12 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 71
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WV+EL+++ +V+ + GNK DL REV +A
Sbjct: 72 YRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERDAK 131
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ SI + ETSA I ++F+ +S+ +
Sbjct: 132 DYADSIHAIFVETSAKNAININELFIEISRRI 163
>gi|121706988|ref|XP_001271697.1| RAB GTPase Ypt5, putative [Aspergillus clavatus NRRL 1]
gi|119399845|gb|EAW10271.1| RAB GTPase Ypt5, putative [Aspergillus clavatus NRRL 1]
Length = 218
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ E+ VK ++WDTAGQER++S+APM
Sbjct: 27 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQERYKSLAPM 86
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +V+ + GNK DL + R +
Sbjct: 87 YYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTENPDKRAIQ 146
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + ++F ++K L
Sbjct: 147 TADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKL 183
>gi|406604009|emb|CCH44471.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 208
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 102/156 (65%), Gaps = 4/156 (2%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T + +G+ +K ++WDTAGQERF S+APMY
Sbjct: 18 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQRCIIGDKTIKFEIWDTAGQERFASLAPMY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVNR 231
YRNA AAL+V+DIT+ SF + W+KEL + +++ +VGNK D+ ES+R+V
Sbjct: 78 YRNAQAALVVYDITKPASFIKARHWIKELHEQASKDIIIALVGNKLDVVEEDESNRKVAY 137
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
EE + G + ETSA +++VF+N+ + +
Sbjct: 138 EEGETLANEEGLIFLETSAKTSFNVKEVFMNIGQKI 173
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T + +G+ +K ++
Sbjct: 18 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQRCIIGDKTIKFEI 61
>gi|390462760|ref|XP_003732900.1| PREDICTED: ras-related protein Rab-22A-like [Callithrix jacchus]
Length = 228
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 49 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 108
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 109 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 168
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 169 DYADSIHAIFVETSAKNAININELFIEISR 198
>gi|405961918|gb|EKC27651.1| Ras-related protein Rab-5C [Crassostrea gigas]
Length = 213
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 31 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 90
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +F K WVKEL+R +V+ + GNK+DL R V EEA
Sbjct: 91 RGAQAAIVVYDITNQDTFGRAKNWVKELQRQASPNIVIALAGNKSDLAQKRMVEYEEAQA 150
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + D+FL ++K L
Sbjct: 151 YAEENSLLFMETSAKTAMNVNDIFLAIAKKL 181
>gi|47086269|ref|NP_998050.1| ras-related protein Rab-5B [Danio rerio]
gi|42744592|gb|AAH66634.1| RAB5B, member RAS oncogene family [Danio rerio]
Length = 214
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 96/153 (62%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+ VGK+S+V+R++ F TIGA+F + + + VK ++WDTAGQER+ S+APM
Sbjct: 29 MAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPM 88
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++VFDIT+ +F K WVKEL+R +V+ + GNK DL R V EEA
Sbjct: 89 YYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGNKADLADKRLVEYEEA 148
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + ++FL ++K +
Sbjct: 149 QTYAEDTGLLFMETSAKTAMNVNELFLAIAKKM 181
>gi|410335381|gb|JAA36637.1| RAB22A, member RAS oncogene family [Pan troglodytes]
Length = 196
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 99/151 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKG 266
Y+ SI + ETSA I ++F+ +S G
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISLG 165
>gi|126341423|ref|XP_001369723.1| PREDICTED: ras-related protein Rab-5A-like [Monodelphis domestica]
Length = 215
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL S R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMETSAKTSVNVNEIFMAIAKKL 181
>gi|367007916|ref|XP_003688687.1| hypothetical protein TPHA_0P00950 [Tetrapisispora phaffii CBS 4417]
gi|357526997|emb|CCE66253.1| hypothetical protein TPHA_0P00950 [Tetrapisispora phaffii CBS 4417]
Length = 213
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 98/153 (64%), Gaps = 5/153 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+VVR++ FS + PTIGA+F T ++N+ ++ +K ++WDTAGQERF S+APMY
Sbjct: 17 AVGKSSIVVRFVSNDFSENKEPTIGAAFLTQRVNIDDHTIKFEIWDTAGQERFASLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL-----ESSREVN 230
YRNA AAL+V+D+T+ SF + WVKEL +V+ + GNK DL E+ R+V
Sbjct: 77 YRNAQAALIVYDVTKPQSFIKARHWVKELHEQASGDIVIALAGNKVDLIEENGENERKVA 136
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNV 263
EE + ++ETSA + ++FL V
Sbjct: 137 TEEGQKLADEENLLFFETSAKTGYNVNEIFLAV 169
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 32/44 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+VVR++ FS + PTIGA+F T ++N+ ++ +K ++
Sbjct: 17 AVGKSSIVVRFVSNDFSENKEPTIGAAFLTQRVNIDDHTIKFEI 60
>gi|148747177|ref|NP_077756.2| ras-related protein Rab-22A [Mus musculus]
gi|46577691|sp|P35285.2|RB22A_MOUSE RecName: Full=Ras-related protein Rab-22A; Short=Rab-22; AltName:
Full=Rab-14
gi|13879258|gb|AAH06596.1| RAB22A, member RAS oncogene family [Mus musculus]
gi|14422309|emb|CAC41378.1| RAB22A protein [Mus musculus]
gi|26327515|dbj|BAC27501.1| unnamed protein product [Mus musculus]
gi|74144602|dbj|BAE27289.1| unnamed protein product [Mus musculus]
gi|74151840|dbj|BAE29707.1| unnamed protein product [Mus musculus]
gi|112293001|dbj|BAF02878.1| Rab22A [Mus musculus]
gi|148674704|gb|EDL06651.1| RAB22A, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 194
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WV+EL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|398012080|ref|XP_003859234.1| small Rab GTP binding protein, putative [Leishmania donovani]
gi|38146267|gb|AAR11496.1| Rab5b [Leishmania donovani]
gi|322497448|emb|CBZ32522.1| small Rab GTP binding protein, putative [Leishmania donovani]
Length = 211
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 100/154 (64%), Gaps = 2/154 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPM 174
GVGK+S+V R + FS ++ T+GASFF NV ++ V +WDTAGQERF+S+A M
Sbjct: 30 GVGKSSVVQRLMKNAFSEKLNSTVGASFFRYTCNVDDDTAVHFDIWDTAGQERFKSLASM 89
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AAL+VFDI +F + W++EL+ N E +V+ +VGNK DLES R+V+ +A
Sbjct: 90 YYRGAAAALVVFDIVSADTFEKARYWIRELQANSPETIVM-LVGNKKDLESERQVSLADA 148
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+ +G Y+ETSA G++D F V+ LI
Sbjct: 149 QQCAVEMGAMYHETSARSGDGVQDAFHAVAAKLI 182
>gi|195433707|ref|XP_002064849.1| GK14984 [Drosophila willistoni]
gi|194160934|gb|EDW75835.1| GK14984 [Drosophila willistoni]
Length = 220
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T I + + VK ++WDTAGQER+ S+APMY
Sbjct: 39 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLAPMY 98
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DI SF KTWVKEL + +V+ + GNK DL + R V +EA
Sbjct: 99 YRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNIRVVEFDEAK 158
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+FL ++K L
Sbjct: 159 QYAEENGLLFMETSAKTGMNVNDIFLAIAKKL 190
>gi|113931342|ref|NP_001039118.1| RAB22A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89268938|emb|CAJ82023.1| RAB22A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 193
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVPHQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F +K WVKEL+++ +V+ + GNK DL REV ++A
Sbjct: 75 YRGSTAAIIVYDITKEETFLTLKNWVKELRQHGPPNIVVAIAGNKCDLNDVREVLEKDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +SK
Sbjct: 135 DYADSINAVFVETSAKNAININELFIEISK 164
>gi|242023040|ref|XP_002431944.1| rab21, putative [Pediculus humanus corporis]
gi|212517295|gb|EEB19206.1| rab21, putative [Pediculus humanus corporis]
Length = 218
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 102/153 (66%), Gaps = 2/153 (1%)
Query: 117 VGKTSMVVRYIGKMF-SHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY+ F S HI+ T+ ASF KIN+ V L +WDTAGQE+F ++ P+Y
Sbjct: 25 VGKTSVVLRYVEDKFNSDHIT-TLQASFVKKKINIAGKAVNLAIWDTAGQEKFHALGPIY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR +N A+LV+DIT SF +K WVKELK+ + + L + GNK DLE R V + A
Sbjct: 84 YRMSNGAILVYDITDEDSFNKVKNWVKELKKMLGGDICLTIAGNKIDLEKDRNVPIDVAE 143
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
YS S+G +++TSA + I+++FL +++ +I
Sbjct: 144 EYSSSVGAKHFQTSAKHNLNIDELFLELTQRMI 176
>gi|148222944|ref|NP_001080714.1| RAB5C, member RAS oncogene family [Xenopus laevis]
gi|33416792|gb|AAH56058.1| Rab5-prov protein [Xenopus laevis]
Length = 215
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V+ +EA
Sbjct: 91 YRGAQAAIVVYDITNTETFARAKNWVKELQRQASPNIVIALSGNKADLSSKRAVDFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|195115058|ref|XP_002002084.1| GI17188 [Drosophila mojavensis]
gi|193912659|gb|EDW11526.1| GI17188 [Drosophila mojavensis]
Length = 216
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T I + + VK ++WDTAGQER+ S+APMY
Sbjct: 38 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLAPMY 97
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DI SF KTWVKEL + +V+ + GNK DL + R V +EA
Sbjct: 98 YRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNIRVVEFDEAK 157
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+FL ++K L
Sbjct: 158 QYAEENGLLFMETSAKTGMNVNDIFLAIAKKL 189
>gi|146417699|ref|XP_001484817.1| hypothetical protein PGUG_02546 [Meyerozyma guilliermondii ATCC
6260]
gi|146390290|gb|EDK38448.1| hypothetical protein PGUG_02546 [Meyerozyma guilliermondii ATCC
6260]
Length = 209
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 100/159 (62%), Gaps = 7/159 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGE--NKVKLQVWDTAGQERFRSMAP 173
VGK+S+V R++ F + TIGA+F T + + E VK ++WDTAGQER++S+AP
Sbjct: 19 AVGKSSVVHRFVKNTFDNMRESTIGAAFLTQSVTLPEINATVKFEIWDTAGQERYKSLAP 78
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNA+AAL V+DIT SF + W+KELK+ E +V+C+VGNK DLE R+V+
Sbjct: 79 MYYRNAHAALCVYDITNSSSFQKAQNWIKELKKQAPEGIVICLVGNKADLEDERQVDANA 138
Query: 234 AFHYSKSIGGT-----YYETSALQDQGIEDVFLNVSKGL 267
Y + + G E SA +G+ ++F NV+K L
Sbjct: 139 VTAYVEELRGEGIQVFTEECSAKSGEGVLEIFTNVAKAL 177
>gi|345328282|ref|XP_001510989.2| PREDICTED: ras-related protein Rab-22A-like [Ornithorhynchus
anatinus]
Length = 241
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 100/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 62 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 121
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV ++A
Sbjct: 122 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMEKDAK 181
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 182 DYADSIHAIFVETSAKNAININELFIEISR 211
>gi|308485680|ref|XP_003105038.1| CRE-RAB-5 protein [Caenorhabditis remanei]
gi|308256983|gb|EFP00936.1| CRE-RAB-5 protein [Caenorhabditis remanei]
gi|341880645|gb|EGT36580.1| CBN-RAB-5 protein [Caenorhabditis brenneri]
gi|341900137|gb|EGT56072.1| hypothetical protein CAEBREN_25822 [Caenorhabditis brenneri]
Length = 209
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + +K ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SF K WVKEL+R +V+ + GNK D+ + R V EEA
Sbjct: 90 YRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANKRTVEYEEAN 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + D+F+ ++K L
Sbjct: 150 AYAEDNALLFMETSAKTSMNVNDIFMAIAKKL 181
>gi|147899221|ref|NP_001080535.1| RAB5A, member RAS oncogene family [Xenopus laevis]
gi|27694927|gb|AAH43866.1| Rab5a-prov protein [Xenopus laevis]
gi|76780128|gb|AAI06314.1| Rab5a-prov protein [Xenopus laevis]
Length = 216
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 107/178 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 91 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLSTKRAVDFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
Y+ + ETSA + ++F+ ++K L ++ ++++R D +A P
Sbjct: 151 AYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKTEPQAGASNTIRGRGVDLTETAQP 208
>gi|73535725|pdb|1YVD|A Chain A, Gppnhp-Bound Rab22 Gtpase
Length = 169
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WV+EL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|301759461|ref|XP_002915568.1| PREDICTED: ras-related protein Rab-22A-like [Ailuropoda
melanoleuca]
Length = 194
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|126302779|ref|XP_001368849.1| PREDICTED: ras-related protein Rab-22A-like [Monodelphis domestica]
gi|395506750|ref|XP_003757693.1| PREDICTED: ras-related protein Rab-22A [Sarcophilus harrisii]
Length = 194
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|17506899|ref|NP_492481.1| Protein RAB-5 [Caenorhabditis elegans]
gi|3876435|emb|CAB04205.1| Protein RAB-5 [Caenorhabditis elegans]
Length = 208
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + +K ++WDTAGQER+ S+APMY
Sbjct: 29 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQERYHSLAPMY 88
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SF K WVKEL+R +V+ + GNK D+ + R V EEA
Sbjct: 89 YRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANKRTVEYEEAN 148
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + D+F+ ++K L
Sbjct: 149 AYAEDNALLFMETSAKTSMNVNDIFMAIAKKL 180
>gi|440912506|gb|ELR62068.1| Ras-related protein Rab-22A, partial [Bos grunniens mutus]
Length = 182
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 100/152 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 3 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 62
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 63 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 122
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ SI + ETSA I ++F+ +S+ +
Sbjct: 123 DYADSIHAVFVETSAKNAININELFIEISRRI 154
>gi|145257106|ref|XP_001401615.1| GTP-binding protein ypt5 [Aspergillus niger CBS 513.88]
gi|134058525|emb|CAL00734.1| unnamed protein product [Aspergillus niger]
gi|350632151|gb|EHA20519.1| hypothetical protein ASPNIDRAFT_54582 [Aspergillus niger ATCC 1015]
Length = 218
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 105/157 (66%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ E+ VK ++WDTAGQER++S+APM
Sbjct: 27 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQERYKSLAPM 86
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL--ES--SREVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +V+ + GNK DL ES R +
Sbjct: 87 YYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTESPDKRAIP 146
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA ++++F ++K L
Sbjct: 147 TADAEAYAREAGLLFFETSAKTSSNVKELFTAIAKKL 183
>gi|47213194|emb|CAF95985.1| unnamed protein product [Tetraodon nigroviridis]
Length = 213
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 95/153 (62%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+ VGK+S+V+R++ F TIGA+F + + + VK ++WDTAGQER+ S+APM
Sbjct: 30 MAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPM 89
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++VFDIT+ + K WVKEL+R +V+ + GNK DL R V EEA
Sbjct: 90 YYRGAQAAIVVFDITKPETLERAKAWVKELQRQASPNIVIALAGNKADLAERRLVEFEEA 149
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+FL ++K +
Sbjct: 150 QTYAEETGLLFMETSAKTAMNVNDLFLAIAKKM 182
>gi|367012131|ref|XP_003680566.1| hypothetical protein TDEL_0C04660 [Torulaspora delbrueckii]
gi|359748225|emb|CCE91355.1| hypothetical protein TDEL_0C04660 [Torulaspora delbrueckii]
Length = 211
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 114/182 (62%), Gaps = 5/182 (2%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F+ + PTIGA+F T ++N+G+ VK ++WDTAGQERF S+APMY
Sbjct: 17 AVGKSSIVLRFVSNDFTENKEPTIGAAFLTQRVNIGDETVKFEIWDTAGQERFASLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTD-LESS--REVNRE 232
YRNA AAL+V+D+T+ SF + WVKEL + +++ +VGNK D LES R+V RE
Sbjct: 77 YRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKGIIIALVGNKIDVLESGEERKVARE 136
Query: 233 EAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL--HTSSLRVYDSDNITS 290
EA ++ Y+ETSA + + +VFL + + + E LR+ D I
Sbjct: 137 EAEKLAEEENLLYFETSAKTGENVNEVFLAIGEKIPLKKAEDQANQQHGLRITDDQRIDL 196
Query: 291 AN 292
A+
Sbjct: 197 AS 198
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 32/44 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F+ + PTIGA+F T ++N+G+ VK ++
Sbjct: 17 AVGKSSIVLRFVSNDFTENKEPTIGAAFLTQRVNIGDETVKFEI 60
>gi|426241217|ref|XP_004014488.1| PREDICTED: ras-related protein Rab-22A [Ovis aries]
gi|296481198|tpg|DAA23313.1| TPA: RAS-related protein RAB-22A [Bos taurus]
Length = 194
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAVFVETSAKNAININELFIEISR 164
>gi|449281648|gb|EMC88684.1| Ras-related protein Rab-5A [Columba livia]
Length = 215
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 101/166 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLR 281
Y+ + ETSA + ++F+ ++K L +S +S R
Sbjct: 150 AYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSEPQSAGANSAR 195
>gi|344303655|gb|EGW33904.1| hypothetical protein SPAPADRAFT_59281 [Spathaspora passalidarum
NRRL Y-27907]
Length = 217
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 98/159 (61%), Gaps = 11/159 (6%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K +GE +K ++WDTAGQERF S+APMY
Sbjct: 19 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQERFASLAPMY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL-----------E 224
YRNA AA++V+DIT+ SF + WVKEL + + + +VGNK DL E
Sbjct: 79 YRNAQAAIVVYDITKPASFIKARHWVKELHEQAAKDITIALVGNKYDLVQDDDEGQGERE 138
Query: 225 SSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNV 263
R+V+ EE + + G +YETSA + DVF+ +
Sbjct: 139 GVRKVSVEEGQNLAAEEGLLFYETSAKTSYNVNDVFIGI 177
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K +GE +K ++
Sbjct: 19 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEI 62
>gi|242093978|ref|XP_002437479.1| hypothetical protein SORBIDRAFT_10g027890 [Sorghum bicolor]
gi|241915702|gb|EER88846.1| hypothetical protein SORBIDRAFT_10g027890 [Sorghum bicolor]
Length = 210
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 105/166 (63%), Gaps = 10/166 (6%)
Query: 115 LGVGKTSMVVRYIGKMF---------SHHISPTIGASFFTAKINVGENKVKLQVWDTAGQ 165
LG GKTS+VVR+ ++ S H TIGA+FF+ +++ E VKL +WDTAGQ
Sbjct: 17 LGAGKTSIVVRFAKGLYYECQARTTTSFHQESTIGAAFFSQVLSLDEATVKLDIWDTAGQ 76
Query: 166 ERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLE 224
ER+ S+APMYYR A AA++VFDIT S+ K WV EL+R P LV+ +V NK DL+
Sbjct: 77 ERYHSLAPMYYRGAAAAIVVFDITSTDSYVRAKRWVDELQRQGRNPHLVMALVANKVDLQ 136
Query: 225 SSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICL 270
R+V +EA Y+++ G + ETSA Q + ++F +++ L+ L
Sbjct: 137 ERRQVGTQEAMDYAEANGLFFTETSAKTAQNVTELFYELAERLVKL 182
>gi|348552524|ref|XP_003462077.1| PREDICTED: ras-related protein Rab-22A-like [Cavia porcellus]
Length = 194
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|30583895|gb|AAP36196.1| Homo sapiens RAB22A, member RAS oncogene family [synthetic
construct]
gi|61370724|gb|AAX43543.1| RAB22A member RAS oncogene family [synthetic construct]
gi|61370733|gb|AAX43544.1| RAB22A member RAS oncogene family [synthetic construct]
Length = 195
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|417396853|gb|JAA45460.1| Putative gtpase [Desmodus rotundus]
Length = 194
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|226291514|gb|EEH46942.1| GTP-binding protein ypt5 [Paracoccidioides brasiliensis Pb18]
Length = 217
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 102/157 (64%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ E+ VK ++WDTAGQER++S+APM
Sbjct: 27 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQERYKSLAPM 86
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +++ + GNK DL R +
Sbjct: 87 YYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKLDLVMDSPDKRAIQ 146
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + ++F ++K L
Sbjct: 147 TADAEAYAREAGLLFFETSAKSATNVRELFTAIAKKL 183
>gi|195052912|ref|XP_001993394.1| GH13785 [Drosophila grimshawi]
gi|193900453|gb|EDV99319.1| GH13785 [Drosophila grimshawi]
Length = 216
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T I + + VK ++WDTAGQER+ S+APMY
Sbjct: 38 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLAPMY 97
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DI SF KTWVKEL + +V+ + GNK DL + R V +EA
Sbjct: 98 YRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNIRVVEFDEAK 157
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+FL ++K L
Sbjct: 158 QYAEENGLLFMETSAKTGMNVNDIFLAIAKKL 189
>gi|428174756|gb|EKX43650.1| hypothetical protein GUITHDRAFT_159784 [Guillardia theta CCMP2712]
Length = 204
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 106/167 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 20 AVGKSSLVLRFVRGQFFDYQESTIGAAFLTQTVALNDTTVKFEIWDTAGQERYHSLAPMY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K+WV+EL+R + +V+ + GNK+DL S R+V +EA
Sbjct: 80 YRGAAAAIVVYDITSTDSFARAKSWVRELQRQGNPNIVIALAGNKSDLASKRKVEPDEAR 139
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRV 282
Y++ + ETSA + ++F+ +++ L Q+ + S +
Sbjct: 140 QYAEENNIMFMETSAKTASNVNELFVQIARKLPKQQQQDKPSGSANI 186
>gi|410911128|ref|XP_003969042.1| PREDICTED: ras-related protein Rab-5A-like [Takifugu rubripes]
Length = 216
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 105/178 (58%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL S R V+ ++A
Sbjct: 91 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLASKRAVDFQDAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
Y+ + ETSA + ++F+ ++K L ++ SS R D +A P
Sbjct: 151 SYADDNSLLFMETSAKTSMNVNEIFMAIAKRLPKSEPQAAGGSSGRNRGVDLTEAAQP 208
>gi|50978970|ref|NP_001003208.1| ras-related protein Rab-22A [Canis lupus familiaris]
gi|3256092|emb|CAA80473.1| Rab22a protein [Canis lupus familiaris]
Length = 194
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|399163143|gb|AFP33147.1| rab-5, partial [Caenorhabditis elegans]
Length = 207
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + +K ++WDTAGQER+ S+APMY
Sbjct: 28 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQERYHSLAPMY 87
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SF K WVKEL+R +V+ + GNK D+ + R V EEA
Sbjct: 88 YRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANKRTVEYEEAN 147
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + D+F+ ++K L
Sbjct: 148 AYAEDNALLFMETSAKTSMNVNDIFMAIAKKL 179
>gi|146080635|ref|XP_001464048.1| putative small Rab GTP binding protein [Leishmania infantum JPCM5]
gi|134068138|emb|CAM66423.1| putative small Rab GTP binding protein [Leishmania infantum JPCM5]
Length = 211
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 100/154 (64%), Gaps = 2/154 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPM 174
GVGK+S+V R + FS ++ T+GASFF NV ++ V +WDTAGQERF+S+A M
Sbjct: 30 GVGKSSVVQRLMKNAFSEKLNSTVGASFFRYTCNVDDDTAVHFDIWDTAGQERFKSLASM 89
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AAL+VFDI +F + W++EL+ N E +V+ +VGNK DLES R+V+ +A
Sbjct: 90 YYRGAAAALVVFDIISADTFEKARYWIRELQANSPETIVM-LVGNKKDLESERQVSLADA 148
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+ +G Y+ETSA G++D F V+ LI
Sbjct: 149 QQCAVEMGAMYHETSARSGDGVQDAFHAVAAKLI 182
>gi|148234775|ref|NP_001079817.1| muscle RAS oncogene homolog [Xenopus laevis]
gi|32766475|gb|AAH54969.1| MGC64433 protein [Xenopus laevis]
Length = 213
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 97/153 (63%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+ VGK+S+V+R++ F TIGA+F + + + VK ++WDTAGQER+ S+APM
Sbjct: 28 MAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPM 87
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++VFDIT+ +F K WVKEL+R +V+ + GNK+DL R V EEA
Sbjct: 88 YYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDLAEKRMVEYEEA 147
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + ++FL ++K +
Sbjct: 148 QTYAEDTGLLFMETSAKTAMNVNELFLAIAKKM 180
>gi|343427700|emb|CBQ71227.1| probable GTP-binding protein ypt5 [Sporisorium reilianum SRZ2]
Length = 221
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-GENKVKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T +++ + VK ++WDTAGQER++S+APM
Sbjct: 22 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVSLDAQTTVKFEIWDTAGQERYKSLAPM 81
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSRE-VNREE 233
YYRNAN A++V+DITQ S K W++EL+R D +++ + GNK DL S+R + EE
Sbjct: 82 YYRNANCAVVVYDITQPSSLDKAKAWIRELQRQADPNIIIALAGNKADLASTRRAIPTEE 141
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
A Y++ G + ETSA + ++F +++ L
Sbjct: 142 AEKYAQEEGLLFLETSAKDSSNVSELFTMIARKL 175
>gi|302563975|ref|NP_001180746.1| ras-related protein Rab-22A [Macaca mulatta]
gi|297707438|ref|XP_002830512.1| PREDICTED: ras-related protein Rab-22A [Pongo abelii]
gi|397469142|ref|XP_003806222.1| PREDICTED: ras-related protein Rab-22A [Pan paniscus]
gi|402882151|ref|XP_003904614.1| PREDICTED: ras-related protein Rab-22A [Papio anubis]
gi|426392268|ref|XP_004062478.1| PREDICTED: ras-related protein Rab-22A [Gorilla gorilla gorilla]
gi|380788255|gb|AFE66003.1| ras-related protein Rab-22A [Macaca mulatta]
gi|383420237|gb|AFH33332.1| ras-related protein Rab-22A [Macaca mulatta]
gi|410220672|gb|JAA07555.1| RAB22A, member RAS oncogene family [Pan troglodytes]
gi|410260092|gb|JAA18012.1| RAB22A, member RAS oncogene family [Pan troglodytes]
gi|410298900|gb|JAA28050.1| RAB22A, member RAS oncogene family [Pan troglodytes]
gi|410335379|gb|JAA36636.1| RAB22A, member RAS oncogene family [Pan troglodytes]
Length = 194
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|403419564|emb|CCM06264.1| predicted protein [Fibroporia radiculosa]
Length = 204
Score = 140 bits (354), Expect = 1e-30, Method: Composition-based stats.
Identities = 63/148 (42%), Positives = 100/148 (67%), Gaps = 1/148 (0%)
Query: 121 SMVVRYIGKMFSHHISPTIGASFFTAKINV-GENKVKLQVWDTAGQERFRSMAPMYYRNA 179
S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER++S+APMYYRNA
Sbjct: 18 SLVLRFVKDQFDDYRESTIGAAFLTQTVTLEDQTTVKFEIWDTAGQERYKSLAPMYYRNA 77
Query: 180 NAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFHYSK 239
N A++V+DITQ S ++W++EL+R D +V+ + GNK+DL + R+V EEA Y+
Sbjct: 78 NCAVVVYDITQTASLEKARSWIRELQRQADPSIVIALCGNKSDLAARRQVTEEEAKKYAD 137
Query: 240 SIGGTYYETSALQDQGIEDVFLNVSKGL 267
G + ETSA +G++++F ++K L
Sbjct: 138 EEGLMWCETSAKTGEGVQEIFTAIAKKL 165
>gi|348537690|ref|XP_003456326.1| PREDICTED: ras-related protein Rab-5B-like [Oreochromis niloticus]
Length = 216
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 96/153 (62%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+ VGK+S+V+R++ F TIGA+F + + + VK ++WDTAGQER+ S+APM
Sbjct: 30 MAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPM 89
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++VFDIT+ +F K WVKEL+R +V+ + GNK DL R V EEA
Sbjct: 90 YYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGNKADLAEKRLVEYEEA 149
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + ++FL ++K +
Sbjct: 150 QTYAEDTGLLFMETSAKTAMNVNELFLAIAKKM 182
>gi|340517201|gb|EGR47446.1| rab5-like GTPase [Trichoderma reesei QM6a]
Length = 220
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 102/157 (64%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 29 AVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 88
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL R ++
Sbjct: 89 YYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVNEQPDKRAIS 148
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + + ++F ++K L
Sbjct: 149 TADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKL 185
>gi|18568105|gb|AAL75941.1|AF125104_1 RAB22 [Homo sapiens]
Length = 194
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|355562999|gb|EHH19561.1| Ras-related protein Rab-22A, partial [Macaca mulatta]
gi|355784359|gb|EHH65210.1| Ras-related protein Rab-22A, partial [Macaca fascicularis]
Length = 188
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 100/152 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 9 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 68
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 69 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 128
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ SI + ETSA I ++F+ +S+ +
Sbjct: 129 DYADSIHAIFVETSAKNAININELFIEISRRI 160
>gi|355714872|gb|AES05145.1| RAB22A, member RAS oncoprotein family [Mustela putorius furo]
Length = 193
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|401417481|ref|XP_003873233.1| putative small Rab GTP binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489462|emb|CBZ24720.1| putative small Rab GTP binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 211
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 100/154 (64%), Gaps = 2/154 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPM 174
GVGK+S+V R + FS ++ T+GASFF NV +N V +WDTAGQERF+S+A M
Sbjct: 30 GVGKSSVVQRLMKNAFSEKLNSTVGASFFRYTCNVDDNTAVHFDIWDTAGQERFKSLASM 89
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AAL+VFDI ++ K W++EL+ N E +V+ +VGNK DLES R+V+ +A
Sbjct: 90 YYRGAAAALVVFDIVSADTYEKAKYWIRELQSNSPETMVM-LVGNKKDLESERQVSLADA 148
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+ +G Y+ETSA G++D F V+ L+
Sbjct: 149 QQCAVEMGVMYHETSARSGDGVQDAFHAVAAKLV 182
>gi|195387317|ref|XP_002052342.1| GJ22226 [Drosophila virilis]
gi|194148799|gb|EDW64497.1| GJ22226 [Drosophila virilis]
Length = 216
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T I + + VK ++WDTAGQER+ S+APMY
Sbjct: 38 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLAPMY 97
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DI SF KTWVKEL + +V+ + GNK DL + R V +EA
Sbjct: 98 YRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNIRVVEFDEAK 157
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+FL ++K L
Sbjct: 158 QYAEENGLLFMETSAKTGMNVNDIFLAIAKKL 189
>gi|116782322|gb|ABK22463.1| unknown [Picea sitchensis]
gi|116793226|gb|ABK26663.1| unknown [Picea sitchensis]
gi|224284237|gb|ACN39854.1| unknown [Picea sitchensis]
Length = 200
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 102/153 (66%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F + TIGA+FF+ + V E VKL++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSSLVLRFVKGQFFAYQESTIGAAFFSQTLAVNETSVKLEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL++ + +V+ + GNK+D+ +V+ EEA
Sbjct: 79 YYRGAAAAIIVYDITNLDSFVRAKKWVQELQKQGNPNMVMALAGNKSDMIEKSKVSPEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA Q + ++F +++ L
Sbjct: 139 KVYAQENGLFFMETSAKTAQNVNELFYEIARRL 171
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
+G GK+S+V+R++ F + TIGA+FF+ + V E VKL++
Sbjct: 19 MGAGKSSLVLRFVKGQFFAYQESTIGAAFFSQTLAVNETSVKLEI 63
>gi|281348435|gb|EFB24019.1| hypothetical protein PANDA_003579 [Ailuropoda melanoleuca]
Length = 185
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 100/152 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 6 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 65
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 66 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 125
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ SI + ETSA I ++F+ +S+ +
Sbjct: 126 DYADSIHAIFVETSAKNAININELFIEISRRI 157
>gi|238491614|ref|XP_002377044.1| RAB GTPase Ypt5, putative [Aspergillus flavus NRRL3357]
gi|317146075|ref|XP_001821272.2| GTP-binding protein ypt5 [Aspergillus oryzae RIB40]
gi|220697457|gb|EED53798.1| RAB GTPase Ypt5, putative [Aspergillus flavus NRRL3357]
gi|391869236|gb|EIT78438.1| GTPase Rab5/YPT51 [Aspergillus oryzae 3.042]
Length = 218
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ E+ VK ++WDTAGQER++S+APM
Sbjct: 27 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQERYKSLAPM 86
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +V+ + GNK DL + R +
Sbjct: 87 YYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTENPDKRAIP 146
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + ++F ++K L
Sbjct: 147 TADAEAYAREAGLLFFETSAKTSSNVRELFTAIAKKL 183
>gi|10636479|emb|CAC10538.1| GTP-binding protein RAB22A [Homo sapiens]
Length = 194
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|225717846|gb|ACO14769.1| Ras-related protein Rab-5C [Caligus clemensi]
Length = 220
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T I + + VK ++WDTAGQER+ S+APMY
Sbjct: 35 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTICLDDTTVKFEIWDTAGQERYHSLAPMY 94
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+D+T SF K WVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 95 YRGAQAAIVVYDVTNQDSFTRAKNWVKELQRQASPNIVIALAGNKNDLTTKRLVMYEEAQ 154
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+F+ ++K L
Sbjct: 155 TYAEENGLLFMETSAKTALNVNDIFMEIAKKL 186
>gi|395829258|ref|XP_003787777.1| PREDICTED: ras-related protein Rab-22A [Otolemur garnettii]
Length = 194
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|403282653|ref|XP_003932756.1| PREDICTED: ras-related protein Rab-22A [Saimiri boliviensis
boliviensis]
Length = 248
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 69 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 128
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 129 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 188
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 189 DYADSIHAIFVETSAKNAININELFIEISR 218
>gi|289743331|gb|ADD20413.1| Rab protein 5 [Glossina morsitans morsitans]
Length = 222
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 95/152 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T I + + VK ++WDTAGQER+ S+APMY
Sbjct: 41 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLAPMY 100
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DI SF TWVKEL + +V+ + GNK DL + R V EEA
Sbjct: 101 YRGAQAAIVVYDIQNQDSFQRATTWVKELHKQASPNIVIALAGNKADLSNIRVVEYEEAK 160
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+FL ++K L
Sbjct: 161 QYAEENGLLFMETSAKTGMNVNDIFLAIAKKL 192
>gi|391334640|ref|XP_003741710.1| PREDICTED: ras-related protein Rab-5C-like [Metaseiulus
occidentalis]
Length = 210
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+D+T +F+ KTWVKEL+R +V+ + GNK DL S R V EA
Sbjct: 90 YRGAQAAIVVYDLTNPDTFSRAKTWVKELQRQASPNIVIALAGNKADLASKRAVETAEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + D+FL ++K L
Sbjct: 150 AYADENQLLFMETSAKTATNVNDIFLAIAKKL 181
>gi|291414854|ref|XP_002723671.1| PREDICTED: RAS-related protein RAB-22A, partial [Oryctolagus
cuniculus]
Length = 182
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 100/152 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 3 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 62
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 63 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 122
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ SI + ETSA I ++F+ +S+ +
Sbjct: 123 DYADSIHAIFVETSAKNAININELFIEISRRI 154
>gi|10190714|ref|NP_065724.1| ras-related protein Rab-22A [Homo sapiens]
gi|13633614|sp|Q9UL26.2|RB22A_HUMAN RecName: Full=Ras-related protein Rab-22A; Short=Rab-22
gi|9961232|gb|AAF00047.2|AF091034_1 GTP-binding protein RAB22A [Homo sapiens]
gi|16041684|gb|AAH15710.1| RAB22A, member RAS oncogene family [Homo sapiens]
gi|30582931|gb|AAP35695.1| RAB22A, member RAS oncogene family [Homo sapiens]
gi|39645547|gb|AAH63457.1| RAB22A, member RAS oncogene family [Homo sapiens]
gi|61361041|gb|AAX41977.1| RAB22A member RAS oncogene family [synthetic construct]
gi|119595902|gb|EAW75496.1| RAB22A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595903|gb|EAW75497.1| RAB22A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|193787092|dbj|BAG52298.1| unnamed protein product [Homo sapiens]
gi|208967238|dbj|BAG73633.1| RAB22A, member RAS oncogene family [synthetic construct]
Length = 194
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|45184648|ref|NP_982366.1| AAL176Cp [Ashbya gossypii ATCC 10895]
gi|44979994|gb|AAS50190.1| AAL176Cp [Ashbya gossypii ATCC 10895]
gi|374105564|gb|AEY94475.1| FAAL176Cp [Ashbya gossypii FDAG1]
Length = 205
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 113/179 (63%), Gaps = 13/179 (7%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK---VKLQVWDTAGQERFRSMAP 173
VGK+S+V R++ F TIGA+F + I + ++ +K ++WDTAGQER++S+AP
Sbjct: 14 VGKSSIVHRFVKDSFDEFRESTIGAAFLSRTIKLADHDDAMIKFEIWDTAGQERYKSLAP 73
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNV-DEPLVLCVVGNKTDLESS----RE 228
MYYRNANAAL+V+D+TQ S A ++WV ELK V DE LV+ +VGNK DL R
Sbjct: 74 MYYRNANAALVVYDVTQEDSLAKAQSWVNELKSKVGDEDLVIFLVGNKLDLVDEDCKPRV 133
Query: 229 VNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL-----HTSSLRV 282
++ EEA Y+++ G ++E SA GI DVF + L +ESL H+SS+++
Sbjct: 134 IDSEEAQAYAEAHGLMFHEVSAKTGTGILDVFQGIGGKLYEQRRESLAAQPQHSSSIQL 192
>gi|17736973|ref|NP_523457.1| Rab5, isoform E [Drosophila melanogaster]
gi|24581101|ref|NP_722795.1| Rab5, isoform A [Drosophila melanogaster]
gi|24581103|ref|NP_722796.1| Rab5, isoform B [Drosophila melanogaster]
gi|24581105|ref|NP_722797.1| Rab5, isoform C [Drosophila melanogaster]
gi|24581107|ref|NP_722798.1| Rab5, isoform D [Drosophila melanogaster]
gi|24581110|ref|NP_722799.1| Rab5, isoform F [Drosophila melanogaster]
gi|442625421|ref|NP_001259925.1| Rab5, isoform G [Drosophila melanogaster]
gi|442625423|ref|NP_001259926.1| Rab5, isoform H [Drosophila melanogaster]
gi|442625425|ref|NP_001259927.1| Rab5, isoform I [Drosophila melanogaster]
gi|194854678|ref|XP_001968400.1| GG24527 [Drosophila erecta]
gi|195341957|ref|XP_002037568.1| GM18235 [Drosophila sechellia]
gi|195470737|ref|XP_002087663.1| GE15124 [Drosophila yakuba]
gi|195576007|ref|XP_002077868.1| GD22841 [Drosophila simulans]
gi|6517198|dbj|BAA87879.1| Drab5 [Drosophila melanogaster]
gi|6561903|dbj|BAA88244.1| Rab5 protein [Drosophila melanogaster]
gi|7295967|gb|AAF51265.1| Rab5, isoform A [Drosophila melanogaster]
gi|16648234|gb|AAL25382.1| GH24702p [Drosophila melanogaster]
gi|22945400|gb|AAN10422.1| Rab5, isoform B [Drosophila melanogaster]
gi|22945401|gb|AAN10423.1| Rab5, isoform C [Drosophila melanogaster]
gi|22945402|gb|AAN10424.1| Rab5, isoform D [Drosophila melanogaster]
gi|22945403|gb|AAN10425.1| Rab5, isoform E [Drosophila melanogaster]
gi|22945404|gb|AAN10426.1| Rab5, isoform F [Drosophila melanogaster]
gi|27227445|gb|AAN85552.1| Rab5 [Drosophila melanogaster]
gi|27227447|gb|AAN85553.1| Rab5 [Drosophila melanogaster]
gi|51477136|tpg|DAA01061.1| TPA_exp: Rab5 [Drosophila melanogaster]
gi|190660267|gb|EDV57459.1| GG24527 [Drosophila erecta]
gi|194132418|gb|EDW53986.1| GM18235 [Drosophila sechellia]
gi|194173764|gb|EDW87375.1| GE15124 [Drosophila yakuba]
gi|194189877|gb|EDX03453.1| GD22841 [Drosophila simulans]
gi|220945650|gb|ACL85368.1| Rab5-PA [synthetic construct]
gi|220955442|gb|ACL90264.1| Rab5-PA [synthetic construct]
gi|440213189|gb|AGB92462.1| Rab5, isoform G [Drosophila melanogaster]
gi|440213190|gb|AGB92463.1| Rab5, isoform H [Drosophila melanogaster]
gi|440213191|gb|AGB92464.1| Rab5, isoform I [Drosophila melanogaster]
Length = 219
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T I + + VK ++WDTAGQER+ S+APMYY
Sbjct: 40 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLAPMYY 99
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DI SF KTWVKEL + +V+ + GNK DL + R V +EA
Sbjct: 100 RGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNIRVVEFDEAKQ 159
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+FL ++K L
Sbjct: 160 YAEENGLLFMETSAKTGMNVNDIFLAIAKKL 190
>gi|71896479|ref|NP_001025499.1| RAB5C, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89270950|emb|CAJ81259.1| RAB5C, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V+ +EA
Sbjct: 91 YRGAQAAIVVYDITNTETFARAKNWVKELQRQASPNIVIALSGNKADLSSKRAVDFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|317737971|ref|NP_001188086.1| ras-related protein rab-22a [Ictalurus punctatus]
gi|308323839|gb|ADO29055.1| ras-related protein rab-22a [Ictalurus punctatus]
Length = 197
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 104/167 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 17 GVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ SF +K WVKEL ++ +V+ + G+K D+ +REV ++A
Sbjct: 77 YRGSAAAIIVYDITKEESFLTLKNWVKELHQHGPSNIVVAIAGDKCDVSDAREVLEKDAK 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRV 282
Y+ SI + ETSA I ++F +S+ + L + L++
Sbjct: 137 DYADSIHAIFVETSAKNAININEIFTEISQKIPLLERSETGVRGLKL 183
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKIN 373
GVGK+S+V R++ F +I+PTIGASF T +
Sbjct: 17 GVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQ 50
>gi|67526769|ref|XP_661446.1| hypothetical protein AN3842.2 [Aspergillus nidulans FGSC A4]
gi|40739917|gb|EAA59107.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259481595|tpe|CBF75261.1| TPA: RAB GTPase Ypt5, putative (AFU_orthologue; AFUA_4G08040)
[Aspergillus nidulans FGSC A4]
Length = 218
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ E+ VK ++WDTAGQER++S+APM
Sbjct: 27 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQERYKSLAPM 86
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +V+ + GNK DL + R +
Sbjct: 87 YYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTENPDKRAIP 146
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + ++F ++K L
Sbjct: 147 TADAEAYAREAGLLFFETSAKTSSNVRELFTAIAKKL 183
>gi|395540249|ref|XP_003772070.1| PREDICTED: ras-related protein Rab-5A [Sarcophilus harrisii]
Length = 215
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|392578003|gb|EIW71131.1| hypothetical protein TREMEDRAFT_27089 [Tremella mesenterica DSM
1558]
Length = 198
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 110/169 (65%), Gaps = 10/169 (5%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ FS TI A+F T +++ EN +K ++WDTAGQER++S+AP+
Sbjct: 16 AVGKSSLVLRFVRNEFSDFRESTI-AAFLTQTVSLDENTSIKFEIWDTAGQERYKSLAPI 74
Query: 175 YYRNANAALLVFDITQ--YHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNRE 232
Y+RN+NAA++ +DITQ SF K WV+EL+R D +V+ +VGNKTDLE+ R+ RE
Sbjct: 75 YFRNSNAAVIAYDITQPPETSFEKAKMWVRELQRQADPSIVIMLVGNKTDLENQRKTPRE 134
Query: 233 EAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLR 281
Y++ G + E SA +G+E +F+ +++ L LHT + R
Sbjct: 135 MGEKYAQEEGLLFAEASAKTGEGVEALFMEIARKL------PLHTPTPR 177
>gi|194759664|ref|XP_001962067.1| GF15280 [Drosophila ananassae]
gi|190615764|gb|EDV31288.1| GF15280 [Drosophila ananassae]
Length = 219
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T I + + VK ++WDTAGQER+ S+APMYY
Sbjct: 40 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLAPMYY 99
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DI SF KTWVKEL + +V+ + GNK DL + R V +EA
Sbjct: 100 RGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNIRVVEFDEAKQ 159
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+FL ++K L
Sbjct: 160 YAEENGLLFMETSAKTGMNVNDIFLAIAKKL 190
>gi|156841129|ref|XP_001643940.1| hypothetical protein Kpol_1016p24 [Vanderwaltozyma polyspora DSM
70294]
gi|156114570|gb|EDO16082.1| hypothetical protein Kpol_1016p24 [Vanderwaltozyma polyspora DSM
70294]
Length = 211
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 106/170 (62%), Gaps = 7/170 (4%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK--VKLQVWDTAGQERFRSMAPM 174
VGK+S+V R++ F TIGA+F + I + E+ +K ++WDTAGQER++S+APM
Sbjct: 14 VGKSSIVHRFVKDSFDEFRESTIGAAFLSQSIKLDEDDTVIKFEIWDTAGQERYKSLAPM 73
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNV-DEPLVLCVVGNKTDL----ESSREV 229
YYRNANAAL+V+DIT S + ++WV+ELK V D+ LV+C+VGNK DL R V
Sbjct: 74 YYRNANAALVVYDITASDSLSKAQSWVEELKNKVADDKLVICLVGNKLDLCQEDSGKRSV 133
Query: 230 NREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSS 279
+A Y+ G ++E SA + + DVF ++ + L +E L + S
Sbjct: 134 EISDAKQYADEQGLLFFEVSAKTGEKVNDVFKSIGESLYSYKKEELLSKS 183
>gi|302927547|ref|XP_003054520.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735461|gb|EEU48807.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 220
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 102/157 (64%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 29 AVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 88
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL R +
Sbjct: 89 YYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVTEQPDKRAIP 148
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + + ++F ++K L
Sbjct: 149 TADAEAYAREAGLLFFETSAKTAENVANLFTAIAKKL 185
>gi|170084457|ref|XP_001873452.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651004|gb|EDR15244.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 173
Score = 140 bits (353), Expect = 2e-30, Method: Composition-based stats.
Identities = 66/153 (43%), Positives = 102/153 (66%), Gaps = 2/153 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG-ENKVKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TI A+F T + + + VK ++WDTAGQER++S+APM
Sbjct: 16 AVGKSSLVLRFVKDQFDDYRESTI-AAFLTQTVTLDDQTTVKFEIWDTAGQERYKSLAPM 74
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYRNAN A++V+DITQ S +TW++EL+R D +V+ + GNK+DL + R+V EEA
Sbjct: 75 YYRNANCAVVVYDITQTASLEKARTWIRELQRQADPSIVIALCGNKSDLAARRQVTEEEA 134
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G + ETSA +G+ ++F ++K L
Sbjct: 135 KKYADEEGLMWAETSAKTGEGVSEIFTAIAKKL 167
>gi|126307942|ref|XP_001364024.1| PREDICTED: ras-related protein Rab-5C-like [Monodelphis domestica]
Length = 216
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 98/152 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V+ +EA
Sbjct: 91 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLGSKRAVDFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + ++F+ ++K L
Sbjct: 151 AYAEDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|427784137|gb|JAA57520.1| Putative rab subfamily protein of small gtpase [Rhipicephalus
pulchellus]
Length = 191
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 98/149 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S++ R++ F+ TIGASF + + + K +WDTAGQER+R++APMY
Sbjct: 16 GVGKSSILQRFVYNTFNSSAESTIGASFMMKNLVLHDRTFKFNIWDTAGQERYRALAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SF A+++WV+EL+ + D +VL + GNK DLE REV+
Sbjct: 76 YRGAGAAVIVYDITSMESFNAVQSWVRELQLHGDPNIVLGIAGNKCDLEDHREVSLATGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVS 264
Y+ G + ETSAL+ I+++F+ ++
Sbjct: 136 SYAHQHGAVFVETSALKATNIQELFMGIA 164
>gi|395532394|ref|XP_003768255.1| PREDICTED: uncharacterized protein LOC100922389 [Sarcophilus
harrisii]
Length = 495
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 97/151 (64%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 311 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 370
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V+ +EA
Sbjct: 371 RGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVDFQEAQA 430
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 431 YADDNSLLFMETSAKTAMNVNEIFMAIAKKL 461
>gi|388491226|gb|AFK33679.1| unknown [Lotus japonicus]
Length = 200
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 99/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 MGTGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL++ + +V+ + GNK+DLE R+V EEA
Sbjct: 79 YYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVVALAGNKSDLEDKRKVTPEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + TSA + DVF ++K L
Sbjct: 139 RVYAEDNGLFFMGTSAKTAANVNDVFYEIAKRL 171
>gi|255639786|gb|ACU20186.1| unknown [Glycine max]
Length = 233
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 98/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 52 MGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 111
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+ IT SF K WV+EL++ + +V+ + GNK DLE R+V EEA
Sbjct: 112 YYRGAAAAIIVYGITSSDSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVTAEEA 171
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+F ++K L
Sbjct: 172 RVYAEENGLFFMETSAKTASNVNDIFYEIAKRL 204
>gi|125985719|ref|XP_001356623.1| GA17598 [Drosophila pseudoobscura pseudoobscura]
gi|195147804|ref|XP_002014864.1| GL19400 [Drosophila persimilis]
gi|54644947|gb|EAL33687.1| GA17598 [Drosophila pseudoobscura pseudoobscura]
gi|194106817|gb|EDW28860.1| GL19400 [Drosophila persimilis]
Length = 218
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T I + + VK ++WDTAGQER+ S+APMYY
Sbjct: 39 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLAPMYY 98
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DI SF KTWVKEL + +V+ + GNK DL + R V +EA
Sbjct: 99 RGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNIRVVEFDEAKQ 158
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+FL ++K L
Sbjct: 159 YAEENGLLFMETSAKTGMNVNDIFLAIAKKL 189
>gi|326921972|ref|XP_003207227.1| PREDICTED: ras-related protein Rab-5A-like [Meleagris gallopavo]
Length = 215
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 AYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|224045361|ref|XP_002196933.1| PREDICTED: ras-related protein Rab-5A [Taeniopygia guttata]
Length = 215
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 101/166 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLR 281
Y+ + ETSA + ++F+ ++K L ++ SS R
Sbjct: 150 AYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNAGASSAR 195
>gi|149634147|ref|XP_001508982.1| PREDICTED: ras-related protein Rab-5A-like [Ornithorhynchus
anatinus]
Length = 215
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|20072723|gb|AAH27378.1| Rab5c protein, partial [Mus musculus]
Length = 203
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 18 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 78 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 138 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 169
>gi|70994486|ref|XP_752022.1| RAB GTPase Ypt5 [Aspergillus fumigatus Af293]
gi|119500926|ref|XP_001267220.1| RAB GTPase Ypt5, putative [Neosartorya fischeri NRRL 181]
gi|66849656|gb|EAL89984.1| RAB GTPase Ypt5, putative [Aspergillus fumigatus Af293]
gi|119415385|gb|EAW25323.1| RAB GTPase Ypt5, putative [Neosartorya fischeri NRRL 181]
gi|159125065|gb|EDP50182.1| RAB GTPase Ypt5, putative [Aspergillus fumigatus A1163]
Length = 218
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ E+ VK ++WDTAGQER++S+APM
Sbjct: 27 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQERYKSLAPM 86
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +V+ + GNK DL R +
Sbjct: 87 YYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTEHPDKRAIP 146
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA ++++F ++K L
Sbjct: 147 TADAEAYAREAGLLFFETSAKTSTNVKELFAAIAKKL 183
>gi|384245047|gb|EIE18543.1| ras-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 215
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 99/153 (64%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS++ R++ F TI A+F + ++ + +V++ +WDTAGQERF S+AP+YY
Sbjct: 25 VGKTSLMARFVHNSFKEDQQATIQAAFMSRQLQIDSQQVEVALWDTAGQERFHSLAPLYY 84
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R+A+AALLV+DIT + ++ WVKEL+ V + +VL ++GNK+DL R V EEA
Sbjct: 85 RDADAALLVYDITDRDTLERVRHWVKELRTMVGDDIVLTILGNKSDLARERTVPEEEAAE 144
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLIC 269
+++SIG + SA QGIE N ++ ++
Sbjct: 145 FAQSIGAQHVSVSAKTGQGIETAVSNSAQKVLA 177
>gi|178056610|ref|NP_001116646.1| ras-related protein Rab-22A [Sus scrofa]
gi|147225162|emb|CAN13146.1| RAB22A, member RAS oncogene family [Sus scrofa]
Length = 194
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVLERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|157866120|ref|XP_001681766.1| putative small Rab GTP binding protein [Leishmania major strain
Friedlin]
gi|68125065|emb|CAJ02473.1| putative small Rab GTP binding protein [Leishmania major strain
Friedlin]
Length = 212
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 99/154 (64%), Gaps = 2/154 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPM 174
GVGK+S+V R + FS ++ T+GASFF NV ++ V +WDTAGQERF+S+A M
Sbjct: 31 GVGKSSVVQRLMKNAFSEKLNSTVGASFFRYTCNVDDDTAVHFDIWDTAGQERFKSLASM 90
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AAL+VFDI +F + W++EL+ N E +V+ +VGNK DLES R+V+ +A
Sbjct: 91 YYRGAAAALVVFDIVSADTFEKARYWIRELQANSPETIVM-LVGNKKDLESERQVSVADA 149
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+ +G Y+ETSA G+ D F V+ LI
Sbjct: 150 QQCAVEMGAVYHETSARSGDGVRDAFHAVAAKLI 183
>gi|77736431|ref|NP_001029915.1| ras-related protein Rab-5C [Bos taurus]
gi|346716331|ref|NP_001231183.1| ras-related protein Rab-5C [Sus scrofa]
gi|410981133|ref|XP_003996927.1| PREDICTED: ras-related protein Rab-5C [Felis catus]
gi|426238047|ref|XP_004012969.1| PREDICTED: ras-related protein Rab-5C [Ovis aries]
gi|75052596|sp|Q58DS9.1|RAB5C_BOVIN RecName: Full=Ras-related protein Rab-5C
gi|61553191|gb|AAX46365.1| RAB5C, member RAS oncogene family isoform b [Bos taurus]
gi|109659170|gb|AAI18227.1| RAB5C, member RAS oncogene family [Bos taurus]
gi|296476370|tpg|DAA18485.1| TPA: ras-related protein Rab-5C [Bos taurus]
gi|440903244|gb|ELR53931.1| Ras-related protein Rab-5C [Bos grunniens mutus]
Length = 216
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 91 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + ++F+ ++K L
Sbjct: 151 AYAEDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|149239626|ref|XP_001525689.1| GTP-binding protein ypt5 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451182|gb|EDK45438.1| GTP-binding protein ypt5 [Lodderomyces elongisporus NRRL YB-4239]
Length = 234
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 100/162 (61%), Gaps = 10/162 (6%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK--VKLQVWDTAGQERFRSMAP 173
VGK+S+V R++ F TIGA+F T I + E + VK ++WDTAGQER++S+AP
Sbjct: 28 AVGKSSIVHRFVKNTFDDMRESTIGAAFLTQSITIPETETTVKFEIWDTAGQERYKSLAP 87
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNANAAL V+DIT SF + W+ EL++ E +V+ +VGNKTDLE REVN++E
Sbjct: 88 MYYRNANAALCVYDITSSSSFTKAQDWISELRKQAPEGIVIALVGNKTDLEEEREVNQDE 147
Query: 234 AFHYSKSI--GGT------YYETSALQDQGIEDVFLNVSKGL 267
Y + GG E SA G+ ++F +++ L
Sbjct: 148 VEEYVTGLLNGGAPEAKIITAECSAKSGDGVIEIFDKIARAL 189
>gi|57530730|ref|NP_001006363.1| ras-related protein Rab-5A [Gallus gallus]
gi|53135109|emb|CAG32396.1| hypothetical protein RCJMB04_24h4 [Gallus gallus]
Length = 215
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 101/166 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLR 281
Y+ + ETSA + ++F+ ++K L ++ SS R
Sbjct: 150 AYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNTGASSAR 195
>gi|410055384|ref|XP_001135766.3| PREDICTED: ras-related protein Rab-22A [Pan troglodytes]
Length = 230
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 51 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 110
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 111 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 170
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 171 DYADSIHAIFVETSAKNAININELFIEISR 200
>gi|407916415|gb|EKG09787.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 219
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 101/157 (64%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I + +N VK ++WDTAGQER++S+APM
Sbjct: 28 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDDNTTVKFEIWDTAGQERYKSLAPM 87
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +V+ + GNK DL R +
Sbjct: 88 YYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIVIALAGNKLDLVTENPDKRAIP 147
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + + ++F ++K L
Sbjct: 148 AADAEQYAREAGLLFFETSAKTAENVRELFTAIAKKL 184
>gi|13096181|pdb|1HUQ|A Chain A, 1.8a Crystal Structure Of The Monomeric Gtpase Rab5c
(Mouse)
Length = 164
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 13 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 72
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 73 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 132
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 133 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 164
>gi|12852239|dbj|BAB29331.1| unnamed protein product [Mus musculus]
Length = 194
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ ++ WV+EL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKAETFSTLENWVRELRQHGPHSMVVAIAGNKCDLTDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|6010033|emb|CAB57220.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 98/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+ ++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 MGAGKSSLVLLFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL++ + +V+ + GNK DLE R+V EEA
Sbjct: 79 YYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVTAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + DVF ++K L
Sbjct: 139 RVYAEENGLFFMETSAKTAANVNDVFHEIAKRL 171
>gi|71013586|ref|XP_758632.1| hypothetical protein UM02485.1 [Ustilago maydis 521]
gi|46098290|gb|EAK83523.1| hypothetical protein UM02485.1 [Ustilago maydis 521]
Length = 221
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-GENKVKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T +++ + VK ++WDTAGQER++S+APM
Sbjct: 22 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVSLDAQTTVKFEIWDTAGQERYKSLAPM 81
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSRE-VNREE 233
YYRNAN A++V+DITQ S K W++EL+R D +++ + GNK DL S+R + EE
Sbjct: 82 YYRNANCAVVVYDITQPSSLDKAKAWIRELQRQADPNIIIALAGNKADLASTRRAIPTEE 141
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
A Y++ G + ETSA + ++F +++ L
Sbjct: 142 AEKYAQEEGLLFLETSAKNSSNVSELFTMIARKL 175
>gi|295668134|ref|XP_002794616.1| GTP-binding protein ypt5 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286032|gb|EEH41598.1| GTP-binding protein ypt5 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 214
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 102/157 (64%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ E+ VK ++WDTAGQER++S+APM
Sbjct: 27 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQERYKSLAPM 86
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +++ + GNK DL R +
Sbjct: 87 YYRNANCAVVVYDITQVSSLDKAKSWVKELQRQANENIIIALAGNKLDLVMDSPDKRAIQ 146
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + ++F ++K L
Sbjct: 147 TADAEAYAREAGLLFFETSAKSATNVRELFTAIAKKL 183
>gi|55962807|emb|CAI11701.1| RAB5A member RAS oncogene family [Danio rerio]
Length = 180
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 94/151 (62%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+ VGK+S+V+R++ F TIGA+F + + + VK ++WDTAGQER+ S+APM
Sbjct: 29 MAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPM 88
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++VFDIT+ +F K WVKEL+R +V+ + GNK DL R V EEA
Sbjct: 89 YYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGNKADLADKRLVEYEEA 148
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++ G + ETSA + ++FL + K
Sbjct: 149 QTYAEDTGLLFMETSAKTAMNVNELFLAIGK 179
>gi|226372644|gb|ACO51947.1| Ras-related protein Rab-5B [Rana catesbeiana]
Length = 213
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 97/153 (63%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+ VGK+S+V+R++ F + TIGA+F + + + VK ++WDTAGQER+ S+APM
Sbjct: 28 MAVGKSSLVLRFVKGQFDEYQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPM 87
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++VFDIT+ +F K WVKEL+R +V+ + GNK+DL R V EEA
Sbjct: 88 YYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDLAEKRMVEFEEA 147
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + ++FL ++K +
Sbjct: 148 QAYAEDTSLLFMETSAKTAMNVNELFLAIAKKM 180
>gi|115397973|ref|XP_001214578.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624]
gi|114192769|gb|EAU34469.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624]
Length = 218
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 104/157 (66%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ ++ VK ++WDTAGQER++S+APM
Sbjct: 27 AVGKSSLVLRFVKNQFDDYRESTIGAAFLTQTISLDDSTTVKFEIWDTAGQERYKSLAPM 86
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +V+ + GNK DL + R ++
Sbjct: 87 YYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTENPDKRAIS 146
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + ++F ++K L
Sbjct: 147 TADAEAYAREAGLLFFETSAKSSTNVHELFTAIAKKL 183
>gi|255720040|ref|XP_002556300.1| KLTH0H09768p [Lachancea thermotolerans]
gi|238942266|emb|CAR30438.1| KLTH0H09768p [Lachancea thermotolerans CBS 6340]
Length = 229
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 104/157 (66%), Gaps = 8/157 (5%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN---KVKLQVWDTAGQERFRSMAP 173
VGK+S+V R++ F TIGA+F + I + ++ +K ++WDTAGQER++S+AP
Sbjct: 36 VGKSSIVHRFVKDSFDEFRESTIGAAFLSQTIKLEKHPDVTIKFEIWDTAGQERYKSLAP 95
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNV-DEPLVLCVVGNKTDL----ESSRE 228
MYYRNANAAL+V+D+TQ S ++WV+ELK V D+ LV+C+ GNK D+ ++RE
Sbjct: 96 MYYRNANAALIVYDVTQPGSLVKAQSWVEELKNKVGDQDLVICLAGNKVDICDEDATARE 155
Query: 229 VNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
V RE+A Y++ G +YETSA G+ +F + +
Sbjct: 156 VQREDAQLYAQEQGLLFYETSAKTGAGVSAIFQEIGE 192
>gi|50979062|ref|NP_001003261.1| ras-related protein Rab-5C [Canis lupus familiaris]
gi|1710027|sp|P51147.1|RAB5C_CANFA RecName: Full=Ras-related protein Rab-5C
gi|415377|emb|CAA81626.1| Rab5c protein [Canis lupus familiaris]
Length = 216
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 91 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|215768963|dbj|BAH01192.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636110|gb|EEE66242.1| hypothetical protein OsJ_22419 [Oryza sativa Japonica Group]
Length = 200
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 100/154 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
LG GKTS+VVR+ ++ TIGA+FF+ + + E VKL +WDTAGQER+ S+APM
Sbjct: 14 LGAGKTSIVVRFAKGLYYDCQESTIGAAFFSQVLIMDEATVKLDIWDTAGQERYHSLAPM 73
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DI+ S+ + WV EL+R + LV+ +VGNK DLE R+V +EA
Sbjct: 74 YYRGAAAAVVVYDISSTDSYIRARKWVDELQRQGNPHLVMALVGNKVDLEEKRQVGTQEA 133
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++ G + ETSA Q + ++F ++ L+
Sbjct: 134 MEYAERNGLFFIETSAKTSQNVTELFYELADRLV 167
>gi|260807647|ref|XP_002598620.1| hypothetical protein BRAFLDRAFT_118354 [Branchiostoma floridae]
gi|229283893|gb|EEN54632.1| hypothetical protein BRAFLDRAFT_118354 [Branchiostoma floridae]
Length = 213
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 28 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 87
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F K WVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 88 YRGAQAAIVVYDITNQDTFERAKNWVKELQRQASPNIVIALSGNKADLANKRMVEYEEAQ 147
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + D+FL ++K L
Sbjct: 148 AYAEDNSLLFMETSAKTAMNVNDIFLAIAKKL 179
>gi|444714079|gb|ELW54967.1| Ras-related protein Rab-5C [Tupaia chinensis]
Length = 216
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 91 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|322712113|gb|EFZ03686.1| Rab5-like protein ypt5 [Metarhizium anisopliae ARSEF 23]
Length = 220
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 100/157 (63%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 29 AVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 88
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K WVKEL+R E +++ + GNK DL R +
Sbjct: 89 YYRNANCAVIVYDITQSSSLDKAKAWVKELQRQAKEDIIIALAGNKLDLVTEQPDKRAIP 148
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + + ++F ++K L
Sbjct: 149 TADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKL 185
>gi|12832758|dbj|BAB22245.1| unnamed protein product [Mus musculus]
Length = 215
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELRRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|301773541|ref|XP_002922175.1| PREDICTED: ras-related protein Rab-5C-like [Ailuropoda melanoleuca]
gi|281344533|gb|EFB20117.1| hypothetical protein PANDA_011151 [Ailuropoda melanoleuca]
Length = 216
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 91 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|218198778|gb|EEC81205.1| hypothetical protein OsI_24236 [Oryza sativa Indica Group]
Length = 200
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 100/154 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
LG GKTS+VVR+ ++ TIGA+FF+ + + E VKL +WDTAGQER+ S+APM
Sbjct: 14 LGAGKTSIVVRFAKGLYYDCQESTIGAAFFSQVLIMDEATVKLDIWDTAGQERYHSLAPM 73
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DI+ S+ + WV EL+R + LV+ +VGNK DLE R+V +EA
Sbjct: 74 YYRGAAAAVVVYDISSTDSYIRARKWVDELQRQGNPHLVMALVGNKVDLEEKRQVGTQEA 133
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++ G + ETSA Q + ++F ++ L+
Sbjct: 134 MEYAERNGLFFIETSAKTSQNVTELFYELADRLV 167
>gi|74215300|dbj|BAE41866.1| unnamed protein product [Mus musculus]
Length = 216
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 91 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|403171097|ref|XP_003330327.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169033|gb|EFP85908.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 725
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 86/121 (71%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+V RY FS+ ++ TIGASF T K++V KV+LQ+WDTAGQERFRSMAPMY
Sbjct: 444 GVGKTSIVHRYTTGSFSYSLTSTIGASFCTKKLSVDGCKVRLQIWDTAGQERFRSMAPMY 503
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR ANAA+LV+DIT SF I+ W+ EL++N+ L++ +VG+K DL EA
Sbjct: 504 YRGANAAILVYDITNQESFLDIQNWLDELRQNMSGDLIIQIVGSKADLAPESRAVEMEAA 563
Query: 236 H 236
H
Sbjct: 564 H 564
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS+V RY FS+ ++ TIGASF T K++V KV+LQ+
Sbjct: 444 GVGKTSIVHRYTTGSFSYSLTSTIGASFCTKKLSVDGCKVRLQI 487
>gi|255546521|ref|XP_002514320.1| protein with unknown function [Ricinus communis]
gi|223546776|gb|EEF48274.1| protein with unknown function [Ricinus communis]
Length = 199
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 96/153 (62%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GKTS+V+R++ F TIGA+FFT +++ E +K +WDTAGQER+ S+APM
Sbjct: 19 MGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEATIKFDIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV EL+R + L++ + NK DL R+V EE
Sbjct: 79 YYRGAAAAVVVYDITSTDSFERAKRWVLELQRQGNPNLIMFLAANKVDLGDKRKVASEEG 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+K G + ETSA Q + ++F ++K L
Sbjct: 139 EQYAKENGLVFLETSAKTAQNVNELFYEIAKKL 171
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 17/138 (12%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL--RTGLKVSKIPVPT 396
+G GKTS+V+R++ F TIGA+FFT +++ E +K + G + P
Sbjct: 19 MGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEATIKFDIWDTAGQERYHSLAPM 78
Query: 397 RNREGATTGRITEPDTMNNNNKKKNRVATTGRPVRSRGGPDRLAINPEGVYCNARFMQAI 456
R A + + + ++ + K V R +G P+ + F+ A
Sbjct: 79 YYRGAAAAVVVYDITSTDSFERAKRWVLELQR----QGNPNLIM-----------FLAAN 123
Query: 457 TLHIGDKVTVYTVHGKQF 474
+ +GDK V + G+Q+
Sbjct: 124 KVDLGDKRKVASEEGEQY 141
>gi|115495947|ref|NP_001069654.1| ras-related protein Rab-5A [Bos taurus]
gi|344288083|ref|XP_003415780.1| PREDICTED: ras-related protein Rab-5A-like [Loxodonta africana]
gi|122144200|sp|Q0IIG7.1|RAB5A_BOVIN RecName: Full=Ras-related protein Rab-5A
gi|113911876|gb|AAI22652.1| RAB5A, member RAS oncogene family [Bos taurus]
Length = 215
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|297671900|ref|XP_002814060.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Pongo abelii]
gi|332215304|ref|XP_003256781.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Nomascus
leucogenys]
Length = 215
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|358390924|gb|EHK40329.1| hypothetical protein TRIATDRAFT_132347 [Trichoderma atroviride IMI
206040]
Length = 220
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 101/157 (64%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 29 AVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 88
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL R +
Sbjct: 89 YYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVNEQPDKRAIP 148
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + + ++F ++K L
Sbjct: 149 TADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKL 185
>gi|508285|gb|AAA74081.1| Rab5c-like protein, similar to Canis familiaris Rab5c protein, PIR
Accession Number S38625 [Homo sapiens]
gi|642532|gb|AAB08927.1| ras-related small GTP binding protein Rab5 [Homo sapiens]
Length = 216
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 91 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|113866024|ref|NP_077776.2| ras-related protein Rab-5C [Mus musculus]
gi|38258917|sp|P35278.2|RAB5C_MOUSE RecName: Full=Ras-related protein Rab-5C
gi|18606182|gb|AAH23027.1| RAB5C, member RAS oncogene family [Mus musculus]
gi|20988213|gb|AAH29678.1| RAB5C, member RAS oncogene family [Mus musculus]
gi|74186351|dbj|BAE42948.1| unnamed protein product [Mus musculus]
gi|74195703|dbj|BAE39656.1| unnamed protein product [Mus musculus]
gi|74204684|dbj|BAE35411.1| unnamed protein product [Mus musculus]
gi|112292959|dbj|BAF02857.1| Rab5C [Mus musculus]
gi|148670588|gb|EDL02535.1| RAB5C, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 216
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 91 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|395826386|ref|XP_003786399.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Otolemur
garnettii]
gi|395826388|ref|XP_003786400.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Otolemur
garnettii]
Length = 216
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 91 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|41393545|ref|NP_004574.2| ras-related protein Rab-5C isoform a [Homo sapiens]
gi|41393614|ref|NP_958842.1| ras-related protein Rab-5C isoform a [Homo sapiens]
gi|197101217|ref|NP_001127529.1| ras-related protein Rab-5C [Pongo abelii]
gi|350539365|ref|NP_001233312.1| ras-related protein Rab-5C [Pan troglodytes]
gi|388454362|ref|NP_001253100.1| ras-related protein Rab-5C [Macaca mulatta]
gi|332260865|ref|XP_003279501.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Nomascus
leucogenys]
gi|332260867|ref|XP_003279502.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Nomascus
leucogenys]
gi|397485574|ref|XP_003813918.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Pan paniscus]
gi|397485576|ref|XP_003813919.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Pan paniscus]
gi|397485580|ref|XP_003813921.1| PREDICTED: ras-related protein Rab-5C isoform 4 [Pan paniscus]
gi|426348253|ref|XP_004041752.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Gorilla gorilla
gorilla]
gi|426348259|ref|XP_004041755.1| PREDICTED: ras-related protein Rab-5C isoform 4 [Gorilla gorilla
gorilla]
gi|441677628|ref|XP_004092752.1| PREDICTED: ras-related protein Rab-5C [Nomascus leucogenys]
gi|441677631|ref|XP_004092753.1| PREDICTED: ras-related protein Rab-5C [Nomascus leucogenys]
gi|38258923|sp|P51148.2|RAB5C_HUMAN RecName: Full=Ras-related protein Rab-5C; AltName: Full=L1880;
AltName: Full=RAB5L
gi|75054865|sp|Q5R7L7.1|RAB5C_PONAB RecName: Full=Ras-related protein Rab-5C
gi|7672665|gb|AAF66594.1|AF141304_1 small GTPase [Homo sapiens]
gi|20379052|gb|AAM21086.1|AF498938_1 small GTP binding protein RAB5C [Homo sapiens]
gi|49456757|emb|CAG46699.1| RAB5C [Homo sapiens]
gi|54695838|gb|AAV38291.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|55731054|emb|CAH92243.1| hypothetical protein [Pongo abelii]
gi|60822879|gb|AAX36624.1| RAB5C member RAS oncogene family [synthetic construct]
gi|61356072|gb|AAX41205.1| RAB5C member RAS oncogene family [synthetic construct]
gi|76779854|gb|AAI06040.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|109731489|gb|AAI14440.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|119581209|gb|EAW60805.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119581210|gb|EAW60806.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119581211|gb|EAW60807.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|190689983|gb|ACE86766.1| RAB5C, member RAS oncogene family protein [synthetic construct]
gi|190691355|gb|ACE87452.1| RAB5C, member RAS oncogene family protein [synthetic construct]
gi|261860716|dbj|BAI46880.1| RAB5C, member RAS oncogene family [synthetic construct]
gi|343960018|dbj|BAK63863.1| ras-related protein Rab-5C [Pan troglodytes]
gi|355568697|gb|EHH24978.1| RAB5L [Macaca mulatta]
gi|355754177|gb|EHH58142.1| hypothetical protein EGM_07930 [Macaca fascicularis]
gi|380815232|gb|AFE79490.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
gi|383411673|gb|AFH29050.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
gi|384941764|gb|AFI34487.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
Length = 216
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 91 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|50979150|ref|NP_001003317.1| ras-related protein Rab-5A [Canis lupus familiaris]
gi|386781059|ref|NP_001248077.1| ras-related protein Rab-5A [Macaca mulatta]
gi|149729693|ref|XP_001495368.1| PREDICTED: ras-related protein Rab-5A-like [Equus caballus]
gi|296228179|ref|XP_002759690.1| PREDICTED: ras-related protein Rab-5A-like [Callithrix jacchus]
gi|301784142|ref|XP_002927485.1| PREDICTED: ras-related protein Rab-5A-like [Ailuropoda melanoleuca]
gi|395816586|ref|XP_003781781.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Otolemur
garnettii]
gi|402861674|ref|XP_003895210.1| PREDICTED: ras-related protein Rab-5A [Papio anubis]
gi|410971499|ref|XP_003992206.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Felis catus]
gi|131794|sp|P18066.1|RAB5A_CANFA RecName: Full=Ras-related protein Rab-5A
gi|47117089|sp|P61271.1|RAB5A_MACFA RecName: Full=Ras-related protein Rab-5A
gi|164056|gb|AAA30889.1| GTP-binding protein (rab5) [Canis lupus familiaris]
gi|14388408|dbj|BAB60752.1| hypothetical protein [Macaca fascicularis]
gi|281349668|gb|EFB25252.1| hypothetical protein PANDA_017269 [Ailuropoda melanoleuca]
gi|351700929|gb|EHB03848.1| Ras-related protein Rab-5A [Heterocephalus glaber]
gi|380787143|gb|AFE65447.1| ras-related protein Rab-5A [Macaca mulatta]
gi|383413157|gb|AFH29792.1| ras-related protein Rab-5A [Macaca mulatta]
gi|384941102|gb|AFI34156.1| ras-related protein Rab-5A [Macaca mulatta]
gi|431917016|gb|ELK16772.1| Ras-related protein Rab-5A [Pteropus alecto]
Length = 215
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|19923262|ref|NP_004153.2| ras-related protein Rab-5A [Homo sapiens]
gi|426339659|ref|XP_004033761.1| PREDICTED: ras-related protein Rab-5A [Gorilla gorilla gorilla]
gi|1346958|sp|P20339.2|RAB5A_HUMAN RecName: Full=Ras-related protein Rab-5A
gi|20379048|gb|AAM21084.1|AF498936_1 small GTP binding protein RAB5A [Homo sapiens]
gi|27462979|gb|AAO15677.1|AF464088_1 cervical cancer oncogene 10 protein [Homo sapiens]
gi|12654847|gb|AAH01267.1| RAB5A, member RAS oncogene family [Homo sapiens]
gi|17390678|gb|AAH18288.1| RAB5A, member RAS oncogene family [Homo sapiens]
gi|49168472|emb|CAG38731.1| RAB5A [Homo sapiens]
gi|117644362|emb|CAL37675.1| hypothetical protein [synthetic construct]
gi|117644826|emb|CAL37879.1| hypothetical protein [synthetic construct]
gi|119584705|gb|EAW64301.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119584706|gb|EAW64302.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119584707|gb|EAW64303.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123981774|gb|ABM82716.1| RAB5A, member RAS oncogene family [synthetic construct]
gi|123996593|gb|ABM85898.1| RAB5A, member RAS oncogene family [synthetic construct]
gi|189069166|dbj|BAG35504.1| unnamed protein product [Homo sapiens]
gi|261860476|dbj|BAI46760.1| RAB5A, member RAS oncogene family [synthetic construct]
Length = 215
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|403304464|ref|XP_003942816.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Saimiri
boliviensis boliviensis]
gi|403304466|ref|XP_003942817.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Saimiri
boliviensis boliviensis]
gi|403304468|ref|XP_003942818.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Saimiri
boliviensis boliviensis]
Length = 216
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 91 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|123419503|ref|XP_001305570.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62869551|gb|AAX97496.1| small Rab GTPase RabD4 [Trichomonas vaginalis]
gi|121887097|gb|EAX92640.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 197
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 94/145 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+V RY+ +++PTIGA+F T + + ++L +WDTAGQE +R +APMY
Sbjct: 17 GVGKTSIVTRYVSGSAPENVNPTIGAAFVTKDVLIDGQNLELLIWDTAGQEVYRGLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+A A +V+D+T+ SF ++ W++ELK NV+E +V+ V GNK DLE R V + A
Sbjct: 77 YRSALIAFIVYDVTKAESFDSVSYWIRELKTNVEENIVILVCGNKVDLEDKRTVEYQTAQ 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVF 260
+ + G Y E SA GIE +F
Sbjct: 137 NMATENGALYAEASATNGTGIERMF 161
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKL 381
GVGKTS+V RY+ +++PTIGA+F T + + ++L
Sbjct: 17 GVGKTSIVTRYVSGSAPENVNPTIGAAFVTKDVLIDGQNLEL 58
>gi|354721184|ref|NP_001238968.1| ras-related protein Rab-5C isoform b [Homo sapiens]
gi|397485578|ref|XP_003813920.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Pan paniscus]
Length = 249
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 64 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 123
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 124 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 183
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 184 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 215
>gi|417408714|gb|JAA50897.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 214
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 29 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 88
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 89 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 148
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 149 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 180
>gi|149723790|ref|XP_001495006.1| PREDICTED: ras-related protein Rab-5C-like [Equus caballus]
Length = 216
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 91 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|388851463|emb|CCF54865.1| probable VPS21-Rab5-like GTPase involved in vacuolar protein
sorting [Ustilago hordei]
Length = 270
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 109/193 (56%), Gaps = 35/193 (18%)
Query: 108 FEANWFWLG---VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAG 164
F+ LG VGK+S+V+R++ F + PTIGA+F T K + + +K ++WDTAG
Sbjct: 25 FQTKLVLLGEAAVGKSSVVLRFVQNDFQENKEPTIGAAFLTQKCRLEDRLIKFEIWDTAG 84
Query: 165 QERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL- 223
QERF S+APMYYRNA A+ +++D+T+ SF K+WVKEL+R + +V+ +VGNK DL
Sbjct: 85 QERFHSLAPMYYRNAQASAVIYDVTKASSFEKAKSWVKELQRQANPNIVIALVGNKIDLL 144
Query: 224 -------------------------------ESSREVNREEAFHYSKSIGGTYYETSALQ 252
ES R V ++EA Y+K G ++ETSA
Sbjct: 145 SETSSSTSTAAEENDDDDETVTATGEAAASGESLRAVPKDEAEAYAKEAGLLFFETSAKT 204
Query: 253 DQGIEDVFLNVSK 265
+G+ +VF ++K
Sbjct: 205 GEGVVEVFTEIAK 217
>gi|74219413|dbj|BAE29485.1| unnamed protein product [Mus musculus]
Length = 215
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|410953504|ref|XP_003983410.1| PREDICTED: ras-related protein Rab-22A [Felis catus]
Length = 226
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 99/150 (66%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 47 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 106
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WV+EL+++ +V+ + GNK DL REV +A
Sbjct: 107 YRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 166
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 167 DYADSIHAIFVETSAKNAININELFIEISR 196
>gi|178056558|ref|NP_001116652.1| ras-related protein Rab-5A [Sus scrofa]
gi|122131883|sp|Q06AU6.1|RAB5A_PIG RecName: Full=Ras-related protein Rab-5A
gi|115394760|gb|ABI97174.1| RAB5A [Sus scrofa]
Length = 215
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|13385374|ref|NP_080163.1| ras-related protein Rab-5A [Mus musculus]
gi|32171710|sp|Q9CQD1.1|RAB5A_MOUSE RecName: Full=Ras-related protein Rab-5A
gi|12842239|dbj|BAB25527.1| unnamed protein product [Mus musculus]
gi|12845986|dbj|BAB26985.1| unnamed protein product [Mus musculus]
gi|13436026|gb|AAH04842.1| RAB5A, member RAS oncogene family [Mus musculus]
gi|21706419|gb|AAH34370.1| RAB5A, member RAS oncogene family [Mus musculus]
gi|26349503|dbj|BAC38391.1| unnamed protein product [Mus musculus]
gi|66396634|gb|AAH96481.1| Rab5a protein [Mus musculus]
gi|74139798|dbj|BAE31744.1| unnamed protein product [Mus musculus]
gi|74185181|dbj|BAE30082.1| unnamed protein product [Mus musculus]
gi|74198271|dbj|BAE35305.1| unnamed protein product [Mus musculus]
gi|74214066|dbj|BAE29448.1| unnamed protein product [Mus musculus]
gi|74219518|dbj|BAE29531.1| unnamed protein product [Mus musculus]
gi|112292955|dbj|BAF02855.1| Rab5A [Mus musculus]
gi|148691716|gb|EDL23663.1| RAB5A, member RAS oncogene family [Mus musculus]
Length = 215
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|444315776|ref|XP_004178545.1| hypothetical protein TBLA_0B01820 [Tetrapisispora blattae CBS 6284]
gi|387511585|emb|CCH59026.1| hypothetical protein TBLA_0B01820 [Tetrapisispora blattae CBS 6284]
Length = 212
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 105/155 (67%), Gaps = 3/155 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ FS + PTIGA+F T ++N+G + +K ++WDTAGQERF S+APMY
Sbjct: 17 AVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNIGNHTIKFEIWDTAGQERFASLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL---ESSREVNRE 232
YRNA AAL+V+D+T+ SF + WVKEL+ ++ +++ +VGNK D+ R+V RE
Sbjct: 77 YRNAQAALVVYDVTKPQSFIKARHWVKELQEQANKGIIIALVGNKADIIEDGEERKVARE 136
Query: 233 EAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
EA ++ G ++ETSA + + FL + + +
Sbjct: 137 EAEKLAEEEGLLFFETSAKTGNNVNETFLAIGEKI 171
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 32/44 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ FS + PTIGA+F T ++N+G + +K ++
Sbjct: 17 AVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNIGNHTIKFEI 60
>gi|332260869|ref|XP_003279503.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Nomascus
leucogenys]
Length = 249
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 64 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 123
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 124 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 183
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 184 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 215
>gi|347800697|ref|NP_001099310.2| ras-related protein Rab-5C [Rattus norvegicus]
gi|149054244|gb|EDM06061.1| rCG32615, isoform CRA_a [Rattus norvegicus]
gi|165970759|gb|AAI58857.1| Rab5c protein [Rattus norvegicus]
Length = 216
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 91 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|358387599|gb|EHK25193.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 220
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 101/157 (64%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 29 AVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 88
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL R +
Sbjct: 89 YYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVTEQPDKRAIP 148
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA + + ++F ++K L
Sbjct: 149 TADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKL 185
>gi|356556138|ref|XP_003546384.1| PREDICTED: ras-related protein RABF2b-like [Glycine max]
Length = 200
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 100/153 (65%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GKTS+ +R++ F + PTIGA+FFT +++ E VK +WDTAGQER+ S+APM
Sbjct: 19 MGTGKTSIALRFVKGHFFPNQEPTIGAAFFTQILSLSEATVKFDIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DI+ +F K WV+EL+ + ++ V+ +V NK+DLE REV E
Sbjct: 79 YYRGAAAAIVVYDISSVDTFVRAKKWVQELQTHGNQKSVMALVANKSDLEPKREVEAEVG 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++ G Y ETSA + I ++F ++K L
Sbjct: 139 EQFAQENGMFYMETSAKTAENINELFYEIAKRL 171
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
+G GKTS+ +R++ F + PTIGA+FFT +++ E VK +
Sbjct: 19 MGTGKTSIALRFVKGHFFPNQEPTIGAAFFTQILSLSEATVKFDI 63
>gi|291406117|ref|XP_002719438.1| PREDICTED: RAB5C, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 216
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 91 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|240849221|ref|NP_001155353.1| ras-related protein Rab-5A [Ovis aries]
gi|238566829|gb|ACR46638.1| RAB5A [Ovis aries]
Length = 215
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|114585675|ref|XP_516319.2| PREDICTED: ras-related protein Rab-5A [Pan troglodytes]
gi|397511743|ref|XP_003826226.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Pan paniscus]
gi|410210354|gb|JAA02396.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410263980|gb|JAA19956.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410302036|gb|JAA29618.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410335267|gb|JAA36580.1| RAB5A, member RAS oncogene family [Pan troglodytes]
Length = 216
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|344285066|ref|XP_003414284.1| PREDICTED: ras-related protein Rab-5C-like [Loxodonta africana]
Length = 216
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 91 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|354485034|ref|XP_003504689.1| PREDICTED: ras-related protein Rab-5C-like [Cricetulus griseus]
gi|344251933|gb|EGW08037.1| Ras-related protein Rab-5C [Cricetulus griseus]
Length = 216
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 91 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|291399699|ref|XP_002716250.1| PREDICTED: RAB5A, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 215
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|440896494|gb|ELR48410.1| Ras-related protein Rab-5A, partial [Bos grunniens mutus]
Length = 218
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 33 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 92
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 93 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 152
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 153 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 184
>gi|449455421|ref|XP_004145451.1| PREDICTED: ras-related protein RABF2b-like [Cucumis sativus]
Length = 199
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 99/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 VGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL+ + +V+ + GNK+DL SR+V E+A
Sbjct: 79 YYRGAAAAIIVYDITNQGSFDRAKKWVQELQAQGNPNMVMALAGNKSDLLDSRKVAAEDA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+F ++K L
Sbjct: 139 QTYAQENGLFFMETSAKSAANVNDIFYEIAKRL 171
>gi|355714960|gb|AES05177.1| RAB5A, member RAS oncoprotein family [Mustela putorius furo]
Length = 213
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 29 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 88
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 89 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 148
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 149 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 180
>gi|194224580|ref|XP_001490105.2| PREDICTED: ras-related protein Rab-22A-like [Equus caballus]
Length = 194
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 98/150 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL ++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELGQHGPPNIVVAIAGNKCDLVDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|426348255|ref|XP_004041753.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Gorilla gorilla
gorilla]
Length = 249
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 64 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 123
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 124 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 183
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 184 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 215
>gi|55670031|pdb|1TU3|A Chain A, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670032|pdb|1TU3|B Chain B, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670033|pdb|1TU3|C Chain C, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670034|pdb|1TU3|D Chain D, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670035|pdb|1TU3|E Chain E, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
Length = 171
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 17 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 77 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 137 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 168
>gi|355714965|gb|AES05179.1| RAB5C, member RAS oncoprotein family [Mustela putorius furo]
Length = 215
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 63 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 122
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 123 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 182
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 183 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 214
>gi|319401891|ref|NP_001187496.1| ras-related protein rab-5a [Ictalurus punctatus]
gi|308323159|gb|ADO28716.1| ras-related protein rab-5a [Ictalurus punctatus]
Length = 217
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 106/178 (59%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 32 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 91
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL S R ++ ++A
Sbjct: 92 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLASKRALDFQDAQ 151
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
Y+ + ETSA + ++F+ ++K L ++ +S+ R D +A P
Sbjct: 152 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQAPGSSAGRNRGVDLAETAQP 209
>gi|260946147|ref|XP_002617371.1| hypothetical protein CLUG_02815 [Clavispora lusitaniae ATCC 42720]
gi|238849225|gb|EEQ38689.1| hypothetical protein CLUG_02815 [Clavispora lusitaniae ATCC 42720]
Length = 213
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 98/156 (62%), Gaps = 8/156 (5%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K VG+ +K ++WDTAGQERF S+APMY
Sbjct: 19 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTVGDRTIKYEIWDTAGQERFASLAPMY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL--------ESSR 227
YRNA AAL+V+DIT+ SF + WVKEL + + + +VGNK DL ES R
Sbjct: 79 YRNAQAALVVYDITKPASFIKARHWVKELHEQAAKDITIALVGNKYDLVAADNDTDESLR 138
Query: 228 EVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNV 263
+V+ E ++ G ++ETSA + DVF+ +
Sbjct: 139 KVSVAEGQALAEEEGLLFFETSAKTSHNVNDVFVAI 174
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K VG+ +K ++
Sbjct: 19 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTVGDRTIKYEI 62
>gi|443897405|dbj|GAC74746.1| GTPase Rab5/YPT51 [Pseudozyma antarctica T-34]
Length = 221
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 105/170 (61%), Gaps = 5/170 (2%)
Query: 103 RVPNCFEANWFWLG---VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-GENKVKLQ 158
R P + LG VGK+S+V+R++ F + TIGA+F T +++ + VK +
Sbjct: 5 RNPRMLQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVSLDAQTTVKFE 64
Query: 159 VWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVG 218
+WDTAGQER++S+APMYYRNAN A++V+DITQ S K W++EL+R D +++ + G
Sbjct: 65 IWDTAGQERYKSLAPMYYRNANCAVVVYDITQPSSLDKAKAWIRELQRQADPNIIIALAG 124
Query: 219 NKTDLESSRE-VNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
NK DL S+R V EEA Y++ + ETSA + ++F +++ L
Sbjct: 125 NKADLASTRRAVATEEAEKYAQEENLLFLETSAKDSSNVSELFTMIARKL 174
>gi|426348257|ref|XP_004041754.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Gorilla gorilla
gorilla]
Length = 286
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 101 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 160
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 161 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 220
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 221 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 252
>gi|212275548|ref|NP_001130433.1| uncharacterized protein LOC100191530 [Zea mays]
gi|194689106|gb|ACF78637.1| unknown [Zea mays]
gi|414869113|tpg|DAA47670.1| TPA: ras protein RHN1 [Zea mays]
Length = 204
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 99/154 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 21 VGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPM 80
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL+ + ++ + GNK DL +R+V+ +EA
Sbjct: 81 YYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNSNTIVALAGNKADLLDTRQVSADEA 140
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++ G + ETSA + DVF ++K L+
Sbjct: 141 KAYAQENGLFFMETSAKTATNVNDVFYEIAKKLL 174
>gi|15242309|ref|NP_199326.1| Ras-related protein RHA1 [Arabidopsis thaliana]
gi|297794787|ref|XP_002865278.1| hypothetical protein ARALYDRAFT_494466 [Arabidopsis lyrata subsp.
lyrata]
gi|400976|sp|P31582.1|RAF2A_ARATH RecName: Full=Ras-related protein RABF2a; Short=AtRABF2a; AltName:
Full=Ras-related protein Rab5A; Short=AtRab5A; AltName:
Full=Ras-related protein Rha1
gi|14488100|gb|AAK63870.1|AF389298_1 AT5g45130/K17O22_15 [Arabidopsis thaliana]
gi|16484|emb|CAA41863.1| RHA1 [Arabidopsis thaliana]
gi|397594|emb|CAA80534.1| GTP-binding protein [Arabidopsis thaliana]
gi|9758988|dbj|BAB09498.1| ras-related GTP-binding protein RHA1 [Arabidopsis thaliana]
gi|20453279|gb|AAM19878.1| AT5g45130/K17O22_15 [Arabidopsis thaliana]
gi|297311113|gb|EFH41537.1| hypothetical protein ARALYDRAFT_494466 [Arabidopsis lyrata subsp.
lyrata]
gi|332007825|gb|AED95208.1| Ras-related protein RHA1 [Arabidopsis thaliana]
Length = 200
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 99/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 VGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++VFDIT SF K WV+EL+ + +V+ + GNK DL +R+V+ EEA
Sbjct: 79 YYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVSAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA ++D+F ++K L
Sbjct: 139 EIYAQENSLFFMETSAKTATNVKDIFYEIAKRL 171
>gi|27066008|pdb|1N6H|A Chain A, Crystal Structure Of Human Rab5a
gi|40889551|pdb|1R2Q|A Chain A, Crystal Structure Of Human Rab5a Gtpase Domain At 1.05 A
Resolution
Length = 170
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 16 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 76 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 136 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 167
>gi|297800092|ref|XP_002867930.1| hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp.
lyrata]
gi|297313766|gb|EFH44189.1| hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp.
lyrata]
Length = 200
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 100/153 (65%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 VGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++VFD+T SF K WV+EL+ + +V+ + GNK+DL +R+V EEA
Sbjct: 79 YYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA ++++F +++ L
Sbjct: 139 QTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171
>gi|27066009|pdb|1N6I|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex With
Gdp
gi|27066010|pdb|1N6K|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex With
Gdp And Aluminum Fluoride
gi|27066012|pdb|1N6L|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex With
Gtp
Length = 170
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 17 VGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 76
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 77 RGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQS 136
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 137 YADDNSLLFMETSAKTSMNVNEIFMAIAKKL 167
>gi|115454491|ref|NP_001050846.1| Os03g0666500 [Oryza sativa Japonica Group]
gi|40538929|gb|AAR87186.1| putative small GTP-binding protein [Oryza sativa Japonica Group]
gi|108710277|gb|ABF98072.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113549317|dbj|BAF12760.1| Os03g0666500 [Oryza sativa Japonica Group]
gi|215692370|dbj|BAG87790.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695240|dbj|BAG90431.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 98/154 (63%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 20 VGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPM 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL+ + V+ + GNK DL +R+V EEA
Sbjct: 80 YYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNSSTVVALAGNKADLLETRQVQIEEA 139
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++ G + ETSA + D+F ++K L+
Sbjct: 140 KTYAQENGLFFMETSAKTATNVNDIFYEIAKRLL 173
>gi|449518960|ref|XP_004166503.1| PREDICTED: ras-related protein RABF2b-like, partial [Cucumis
sativus]
Length = 186
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 99/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 6 VGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 65
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL+ + +V+ + GNK+DL SR+V E+A
Sbjct: 66 YYRGAAAAIIVYDITNQGSFDRAKKWVQELQAQGNPNMVMALAGNKSDLLDSRKVAAEDA 125
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+F ++K L
Sbjct: 126 QTYAQENGLFFMETSAKSAANVNDIFYEIAKRL 158
>gi|27066018|pdb|1N6O|A Chain A, Crystal Structure Of Human Rab5a A30k Mutant Complex With
Gppnhp
Length = 170
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 17 VGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 76
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 77 RGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQS 136
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 137 YADDNSLLFMETSAKTSMNVNEIFMAIAKKL 167
>gi|387017940|gb|AFJ51088.1| ras-related protein Rab-5A-like [Crotalus adamanteus]
Length = 215
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + +K ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTIKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMETSAKTSVNVNEIFMAIAKKL 181
>gi|327274891|ref|XP_003222209.1| PREDICTED: ras-related protein Rab-5A-like isoform 1 [Anolis
carolinensis]
gi|327274893|ref|XP_003222210.1| PREDICTED: ras-related protein Rab-5A-like isoform 2 [Anolis
carolinensis]
Length = 215
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ ++A
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANKRAVDFQDAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|27066021|pdb|1N6R|A Chain A, Crystal Structure Of Human Rab5a A30l Mutant Complex With
Gppnhp
Length = 170
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 17 VGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 76
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 77 RGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQS 136
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 137 YADDNSLLFMETSAKTSMNVNEIFMAIAKKL 167
>gi|156083945|ref|XP_001609456.1| Ras-related protein Rab-5 [Babesia bovis T2Bo]
gi|154796707|gb|EDO05888.1| Ras-related protein Rab-5 [Babesia bovis]
Length = 222
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 102/151 (67%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V R++ F TIGA+F T +++ + VK ++WDTAGQER+R++APMYY
Sbjct: 43 VGKSSLVGRFVKNTFLEFQESTIGAAFMTQSVSLDDCTVKFEIWDTAGQERYRTLAPMYY 102
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R ++AA++V+DIT SF K W++EL+ +V +VL + GNK DL+SSREV+RE A
Sbjct: 103 RGSSAAVIVYDITMRESFQQAKGWIQELQAHVGPNVVLALAGNKVDLDSSREVSREVAEE 162
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
++ + + ETSA ++++F ++K +
Sbjct: 163 FAGANNCIFMETSAKNGDMVQELFTEIAKAI 193
>gi|68479347|ref|XP_716205.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68479514|ref|XP_716121.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68483715|ref|XP_714216.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68483800|ref|XP_714175.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46435716|gb|EAK95092.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46435764|gb|EAK95139.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46437777|gb|EAK97117.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46437866|gb|EAK97205.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|238880208|gb|EEQ43846.1| vacuolar protein sorting-associated protein 21 [Candida albicans
WO-1]
Length = 216
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 98/157 (62%), Gaps = 9/157 (5%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K +GE +K ++WDTAGQERF S+APMY
Sbjct: 20 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQERFASLAPMY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL---------ESS 226
YRNA AA++V+DIT+ SF + WVKEL + + + +VGNK DL E+
Sbjct: 80 YRNAQAAIVVYDITKPASFIKARHWVKELHEQANRDITIALVGNKLDLVEDDSAEDGETL 139
Query: 227 REVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNV 263
R+V+ EE + G ++ETSA + +VF+ +
Sbjct: 140 RKVSVEEGQSLADEEGLLFFETSAKTGNNVNEVFVGI 176
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K +GE +K ++
Sbjct: 20 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEI 63
>gi|417397259|gb|JAA45663.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 215
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 95/152 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ + K L
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIGKKL 181
>gi|27066016|pdb|1N6N|A Chain A, Crystal Structure Of Human Rab5a A30r Mutant Complex With
Gppnhp
Length = 170
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 17 VGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 76
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 77 RGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQS 136
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 137 YADDNSLLFMETSAKTSMNVNEIFMAIAKKL 167
>gi|27066019|pdb|1N6P|A Chain A, Crystal Structure Of Human Rab5a A30e Mutant Complex With
Gppnhp
Length = 170
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 17 VGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 76
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 77 RGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQS 136
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 137 YADDNSLLFMETSAKTSMNVNEIFMAIAKKL 167
>gi|224115414|ref|XP_002332129.1| predicted protein [Populus trichocarpa]
gi|222875179|gb|EEF12310.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 98/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 VGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DI+ SF K WV+EL+ + +V+ + GNK DL +R+V EEA
Sbjct: 79 YYRGAAAAIIVYDISNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+F ++K L
Sbjct: 139 QVYAQEYGLFFIETSAKTATNVNDIFYEIAKRL 171
>gi|432867924|ref|XP_004071340.1| PREDICTED: ras-related protein Rab-5C-like [Oryzias latipes]
Length = 218
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++VFDIT +F K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 91 YRGAQAAIVVFDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADLTNKRNVDFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|123410199|ref|XP_001303641.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|67944379|gb|AAY83825.1| small Rab GTPase RabD5 [Trichomonas vaginalis]
gi|121885036|gb|EAX90711.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 199
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 95/145 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+V +Y+ +++PTIGA+F T +N+ ++L +WDTAGQE +R +APMY
Sbjct: 17 GVGKTSIVTQYVSGSAPENVNPTIGAAFVTKDVNIDGQNLELLIWDTAGQEVYRGLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+A A +V+D+T+ +F ++ W++ELK NV+E +V+ V GNK DLE R V + A
Sbjct: 77 YRSALIAFIVYDVTKAETFDSVSYWIRELKTNVEENIVILVCGNKVDLEDKRTVEFQTAQ 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVF 260
+ + G Y ETSA G+ +F
Sbjct: 137 NMATENGALYAETSATTGTGVSRMF 161
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKL 381
GVGKTS+V +Y+ +++PTIGA+F T +N+ ++L
Sbjct: 17 GVGKTSIVTQYVSGSAPENVNPTIGAAFVTKDVNIDGQNLEL 58
>gi|354476585|ref|XP_003500505.1| PREDICTED: ras-related protein Rab-5A-like [Cricetulus griseus]
gi|344240325|gb|EGV96428.1| Ras-related protein Rab-5A [Cricetulus griseus]
Length = 215
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMETSAKTSVNVNEIFMAIAKKL 181
>gi|41393127|ref|NP_958893.1| RAB5A, member RAS oncogene family, a [Danio rerio]
gi|28838709|gb|AAH47803.1| RAB5A, member RAS oncogene family [Danio rerio]
gi|39645921|gb|AAH63966.1| Rab5a protein [Danio rerio]
Length = 216
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 105/178 (58%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ ++A
Sbjct: 91 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQDAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
Y+ + ETSA + ++F+ ++K L ++ +S R D +A P
Sbjct: 151 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSEPQAAGANSGRSRGVDLTETAQP 208
>gi|149642869|ref|NP_001092635.1| ras-related protein Rab-22A [Bos taurus]
gi|148744911|gb|AAI42191.1| RAB22A protein [Bos taurus]
Length = 194
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 98/150 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQERFR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++ + +S+
Sbjct: 135 DYADSIHAVFVETSAKNAININELLIEISR 164
>gi|453089344|gb|EMF17384.1| ras-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 225
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 102/157 (64%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I + E VK ++WDTAGQER++S+APM
Sbjct: 29 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDTAGQERYKSLAPM 88
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL + R V+
Sbjct: 89 YYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNKADLVAEQPDKRAVS 148
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y+K ++ETSA + ++++F ++K L
Sbjct: 149 TADAEAYAKEANLLFFETSAKTAENVKELFTAIAKKL 185
>gi|367012904|ref|XP_003680952.1| hypothetical protein TDEL_0D01570 [Torulaspora delbrueckii]
gi|359748612|emb|CCE91741.1| hypothetical protein TDEL_0D01570 [Torulaspora delbrueckii]
Length = 217
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 107/184 (58%), Gaps = 13/184 (7%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK------VKLQVWDTAGQERFRS 170
VGK+S+V R++ F TIGA+F + I V E+ +K ++WDTAGQER++S
Sbjct: 14 VGKSSIVYRFVKNSFDEFRESTIGAAFLSQTIKVKESDDGEETVIKFEIWDTAGQERYKS 73
Query: 171 MAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNV-DEPLVLCVVGNKTDL------ 223
+APMYYRNANAAL+V+D+TQ S ++WV ELK V D+ LV+C+VGNK DL
Sbjct: 74 LAPMYYRNANAALVVYDVTQQDSLVKAQSWVNELKNKVGDDDLVICLVGNKVDLCDEDAE 133
Query: 224 ESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVY 283
++ R V EEA Y+ +YE SA ++ +F ++ + L E + + R
Sbjct: 134 DNKRAVGTEEARSYANEQNLLFYEVSAKTGLNVQQIFQSIGEKLFETKSEEIAAAKNRQI 193
Query: 284 DSDN 287
S N
Sbjct: 194 GSSN 197
>gi|357153419|ref|XP_003576446.1| PREDICTED: ras-related protein RABF2b-like [Brachypodium
distachyon]
Length = 206
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 98/154 (63%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 22 VGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPM 81
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL+ + V+ + GNK D+ +R+V EEA
Sbjct: 82 YYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTVMALAGNKADMLEARQVPMEEA 141
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++ G + ETSA + DVF ++K L+
Sbjct: 142 KTYAQENGLFFMETSAKTATNVNDVFYEIAKRLL 175
>gi|325183801|emb|CCA18260.1| Rab5 family GTPase putative [Albugo laibachii Nc14]
Length = 211
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG-ENKVKLQVWDTAGQERFRSMAPM 174
VGK+ +VVR++ F + PTIGA+F T +++ E VK ++WDTAGQER+RS+APM
Sbjct: 33 AVGKSCLVVRFVRNEFFEYQEPTIGAAFLTQTVDLDDEVMVKFEIWDTAGQERYRSLAPM 92
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+D+T SF K+WVKEL+R D +V+ + GNK DLES R+V+ EEA
Sbjct: 93 YYRGAAAAVVVYDVTNKDSFIGAKSWVKELQRRGDPNVVIALAGNKADLESRRKVDSEEA 152
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA ++D+F+ ++K L
Sbjct: 153 RQYALDNDILHLETSAKTANNVQDLFIAIAKRL 185
>gi|260797885|ref|XP_002593931.1| hypothetical protein BRAFLDRAFT_283834 [Branchiostoma floridae]
gi|229279163|gb|EEN49942.1| hypothetical protein BRAFLDRAFT_283834 [Branchiostoma floridae]
Length = 164
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 98/150 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+VVR++ F+ ++ TIGASF + + V + K Q+WDTAGQE++R +APMY
Sbjct: 15 GVGKSSLVVRFVTDTFTANLESTIGASFMSKTLVVNDTSYKFQIWDTAGQEKYRGLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT+ SF +K W++ELK+ + +VL + GNK D+E REV+ A
Sbjct: 75 YRGAAAAIVVYDITREGSFQTLKDWIRELKQYGADNIVLAIAGNKCDMEDLREVSTRMAS 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++ + ETSA + +F +S+
Sbjct: 135 DYAEENNAIFLETSAKTAHNVAQMFTLISE 164
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK+S+VVR++ F+ ++ TIGASF + + V + K Q+
Sbjct: 15 GVGKSSLVVRFVTDTFTANLESTIGASFMSKTLVVNDTSYKFQI 58
>gi|392570863|gb|EIW64035.1| GTP-binding protein RAB5 [Trametes versicolor FP-101664 SS1]
Length = 209
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 106/152 (69%), Gaps = 1/152 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + ++ VK ++WDTAGQER++S+APMY
Sbjct: 17 VGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLEDSTTVKFEIWDTAGQERYKSLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNAN A++V+DITQ S K+W++EL+R D +V+ + GNK DL + R+V++EEA
Sbjct: 77 YRNANCAVVVYDITQSTSLEKAKSWIRELQRQADPSIVIALCGNKLDLAARRQVSQEEAK 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA +G+ ++F ++K L
Sbjct: 137 KYAEEEGLMWGETSAKSGEGVSEIFNAIAKKL 168
>gi|167518440|ref|XP_001743560.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777522|gb|EDQ91138.1| predicted protein [Monosiga brevicollis MX1]
Length = 180
Score = 139 bits (349), Expect = 6e-30, Method: Composition-based stats.
Identities = 62/146 (42%), Positives = 97/146 (66%), Gaps = 1/146 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
G GK+S+ Y+ + PTIGASF T I + ++KL +WDTAGQE++R +APMY
Sbjct: 15 GCGKSSLAQLYVYGSCPPRLEPTIGASFLTKMITLDNRELKLSIWDTAGQEKYRGLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKR-NVDEPLVLCVVGNKTDLESSREVNREEA 234
YR+A AA++V+DIT+ +F +++WV EL N + L L + GNK DL+ R+V ++A
Sbjct: 75 YRDAEAAVIVYDITKASTFQNVRSWVSELTAINPGQRLALAIAGNKADLDEQRQVAYQDA 134
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVF 260
Y++S+G ++ETSA+Q + ++F
Sbjct: 135 SKYAESVGAIFFETSAIQGINVHELF 160
>gi|443701022|gb|ELT99690.1| hypothetical protein CAPTEDRAFT_6450 [Capitella teleta]
Length = 169
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 96/151 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F ++ TIGA+F T + V K Q+WDTAGQE++R++APMY
Sbjct: 15 GVGKSSIVHRFVYDSFRPAMTSTIGAAFLTKTVIVDGTTYKYQIWDTAGQEKYRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DITQ SF A K+W+ EL+++ +VL + GNK DL+ R+V A
Sbjct: 75 YRGAAAAIIVYDITQESSFRATKSWITELQKHASPNIVLAIAGNKLDLDDLRDVQYSTAL 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKG 266
Y+ G + ETSA I +F+ +S+
Sbjct: 135 SYADKQGTVFVETSAKSAANIPALFMEISEA 165
>gi|354548327|emb|CCE45063.1| hypothetical protein CPAR2_700670 [Candida parapsilosis]
Length = 231
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 98/159 (61%), Gaps = 7/159 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK--VKLQVWDTAGQERFRSMAP 173
VGK+S+V R++ F TIGA+F T I + E + +K ++WDTAGQER++S+AP
Sbjct: 29 AVGKSSIVHRFVKNTFDDARESTIGAAFLTQSITIPETQTTIKFEIWDTAGQERYKSLAP 88
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNANAAL V+DIT +SFA + W+KELK+ +V+ +VGNK DLE +REV EE
Sbjct: 89 MYYRNANAALCVYDITSRNSFAKAQDWIKELKKQAPSDIVVALVGNKLDLEDNREVQSEE 148
Query: 234 AFHYSKSIGGTYY-----ETSALQDQGIEDVFLNVSKGL 267
Y + + E SA G+ ++F + + L
Sbjct: 149 VDEYISELQTDGFKIIKAECSAKNGDGVVELFEAIGRAL 187
>gi|68481999|ref|XP_715017.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46436619|gb|EAK95978.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|238878219|gb|EEQ41857.1| GTP-binding protein ypt5 [Candida albicans WO-1]
Length = 221
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 96/159 (60%), Gaps = 7/159 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK--VKLQVWDTAGQERFRSMAP 173
VGK+S+V R++ F TIGA+F T I + E++ +K ++WDTAGQER++S+AP
Sbjct: 22 AVGKSSIVHRFVKNTFDDMRESTIGAAFLTQTITIPESETTIKFEIWDTAGQERYKSLAP 81
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNANAAL V+DIT SF + W+KELK+ E +V+ +VGNK+DL+ REV E
Sbjct: 82 MYYRNANAALCVYDITSRSSFQKAQDWIKELKKQAPEGIVIALVGNKSDLDDEREVESSE 141
Query: 234 AFHY-----SKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y S E SA G+ DVF + + L
Sbjct: 142 VQEYVQEQNSDGCSIITAECSAKSGDGVLDVFNKIGRAL 180
>gi|12083645|ref|NP_073183.1| ras-related protein Rab-5A [Rattus norvegicus]
gi|3309068|gb|AAC26004.1| small GTP-binding protein rab5 [Rattus norvegicus]
gi|149027113|gb|EDL82849.1| RAB5A, member RAS oncogene family [Rattus norvegicus]
gi|171847366|gb|AAI61848.1| Rab5a protein [Rattus norvegicus]
Length = 215
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SF+ K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|328856833|gb|EGG05952.1| hypothetical protein MELLADRAFT_116620 [Melampsora larici-populina
98AG31]
Length = 216
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 99/153 (64%), Gaps = 1/153 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T + + + +K ++WDTAGQER++S+APM
Sbjct: 24 AVGKSSLVLRFVQNDFQEYRESTIGAAFLTQTVQLDDQTTIKYEIWDTAGQERYKSLAPM 83
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYRNAN A++V+DIT S K W++EL+R D +V+ + GNK DLE R+V+ +A
Sbjct: 84 YYRNANCAVVVYDITSSASLEKAKNWIRELQRQADSQIVIALAGNKADLEERRQVSTADA 143
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++ ++ETSA + ++F ++K L
Sbjct: 144 RQFAEEENLLFFETSAKDATNVHEIFQAIAKKL 176
>gi|241959174|ref|XP_002422306.1| GTP-binding protein, putative; vacuolar protein sorting-associated
protein, putative; vacuolar protein-targeting protein,
putative [Candida dubliniensis CD36]
gi|223645651|emb|CAX40312.1| GTP-binding protein, putative [Candida dubliniensis CD36]
Length = 216
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 98/157 (62%), Gaps = 9/157 (5%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K +GE +K ++WDTAGQERF S+APMY
Sbjct: 20 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQERFASLAPMY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL---------ESS 226
YRNA AA++V+DIT+ SF + WVKEL + + + +VGNK DL E+
Sbjct: 80 YRNAQAAVVVYDITKPASFIKARHWVKELHEQANRDITIALVGNKLDLVEDDSAEDGETL 139
Query: 227 REVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNV 263
R+V+ EE + G ++ETSA + +VF+ +
Sbjct: 140 RKVSIEEGQTLADEEGLLFFETSAKTGNNVNEVFVGI 176
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K +GE +K ++
Sbjct: 20 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEI 63
>gi|432883290|ref|XP_004074250.1| PREDICTED: ras-related protein Rab-5A-like [Oryzias latipes]
Length = 216
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 104/178 (58%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V ++A
Sbjct: 91 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANKRAVEFQDAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
Y+ + ETSA + ++F+ ++K L ++ +S R D +A P
Sbjct: 151 SYADDNSLLFMETSAKTSMNVNEIFMAIAKRLPKSEPQAPGATSGRNRGVDLTEAAQP 208
>gi|410895511|ref|XP_003961243.1| PREDICTED: ras-related protein Rab-5C-like [Takifugu rubripes]
Length = 221
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 104/180 (57%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 32 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 91
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK D+ + R V +EA
Sbjct: 92 YRGAQAAIVVYDITNSDTFARAKNWVKELQRQASPNIVIALAGNKADIANKRAVEHQEAQ 151
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPRG 295
Y+ + ETSA + ++F+ ++K L + RV ++ A P+G
Sbjct: 152 TYADENSLLFMETSAKTAINVNEIFMAIAKKLPKSEPQGGPGQGGRVRTGVDLQEAAPQG 211
>gi|124000931|ref|XP_001276886.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121918872|gb|EAY23638.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 194
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 96/152 (63%), Gaps = 1/152 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKT +V R F+ I+PT+GAS+ + I V KV LQ+WDTAGQER++ M PMYY
Sbjct: 18 VGKTCIVQRATSGEFNEKITPTLGASYISKVIEVNNQKVNLQIWDTAGQERYKGMTPMYY 77
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AAL+V+ + SF I W + +++N + +VGNK D+E R V+ EE +
Sbjct: 78 RGAQAALIVYAVDSTESFGCIDEWYESVEKNKTNQVHYILVGNKCDVE-KRVVSTEEGKN 136
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+ ++G YYE SAL +GI+D+F+N+ K +
Sbjct: 137 KADALGAQYYEVSALSGEGIDDLFVNIPKKFL 168
>gi|327275534|ref|XP_003222528.1| PREDICTED: ras-related protein Rab-5C-like [Anolis carolinensis]
Length = 216
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 95/151 (62%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T I + + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICLDDTTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +F K WVKEL+R +V+ + GNK DL S R V+ +EA
Sbjct: 92 RGAQAAIVVYDITNMDTFVRAKNWVKELQRQASSNIVIALAGNKADLGSKRAVDFQEAQA 151
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + + F+ ++K L
Sbjct: 152 YADDNSLLFMETSAKTAMNVNETFMAIAKKL 182
>gi|410902731|ref|XP_003964847.1| PREDICTED: ras-related protein Rab-5C-like [Takifugu rubripes]
Length = 220
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 91 YRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADLANKRAVDHQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|308510398|ref|XP_003117382.1| CRE-RAB-21 protein [Caenorhabditis remanei]
gi|308242296|gb|EFO86248.1| CRE-RAB-21 protein [Caenorhabditis remanei]
Length = 210
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 100/152 (65%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ FS TI ASF + +++ + K +L +WDTAGQE++ ++ P+YY
Sbjct: 23 VGKSSLVLRFVENKFSSRHLSTIQASFQSKTVHIDDCKAELHIWDTAGQEKYHALGPIYY 82
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R +N LLVFDIT SF +K WV E+K + + + +VGNK DLE R+V+R++A
Sbjct: 83 RGSNGVLLVFDITDRRSFEKVKNWVLEIKTCLGKTAEILIVGNKIDLEDERQVSRQDAEV 142
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+++ G Y ETSA ++ GI D F ++ +I
Sbjct: 143 YAETEGALYMETSAQENMGISDAFEALTSKMI 174
>gi|134116396|ref|XP_773152.1| hypothetical protein CNBJ1470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255773|gb|EAL18505.1| hypothetical protein CNBJ1470 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 202
Score = 138 bits (347), Expect = 1e-29, Method: Composition-based stats.
Identities = 67/151 (44%), Positives = 105/151 (69%), Gaps = 4/151 (2%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ FS TI A+F T + + E+ +K ++WDTAGQER++S+AP+
Sbjct: 16 AVGKSSLVLRFVRNEFSDFRESTI-AAFLTQSVKLSESTSIKFEIWDTAGQERYKSLAPI 74
Query: 175 YYRNANAALLVFDITQ--YHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNRE 232
Y+RN+NAA++V+DITQ SF K+WV+EL+R D +V+ +VGNKTD+ES R+ +RE
Sbjct: 75 YFRNSNAAVIVYDITQPPETSFEKAKSWVRELQRQADPSIVIMLVGNKTDMESQRKTSRE 134
Query: 233 EAFHYSKSIGGTYYETSALQDQGIEDVFLNV 263
Y+K G + E SA +G+E++F+ +
Sbjct: 135 IGEQYAKEEGLLFAEASAKTGEGVEELFMEI 165
>gi|324518333|gb|ADY47075.1| Ras-related protein Rab2BV [Ascaris suum]
Length = 203
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 99/156 (63%)
Query: 120 TSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYYRNA 179
TS+V+R G+ FS +S T+GASF + V +++LQ+WDTAGQER+ SM PMY RNA
Sbjct: 24 TSIVMRLDGQGFSSKVSSTLGASFIVSSFLVSGRRIELQIWDTAGQERYMSMVPMYVRNA 83
Query: 180 NAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFHYSK 239
AAL+V+D++ +F + W+ EL+R PL+L +VGNK DL+S+R V+ E ++
Sbjct: 84 VAALVVYDVSMKQTFNDLNKWIAELERGSTSPLLLMIVGNKNDLKSARAVSFAEGEAFAL 143
Query: 240 SIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
G ++ETSAL I+ +++ L+ L SL
Sbjct: 144 QKGALFFETSALSGANIQRAMYALAQRLVELESTSL 179
>gi|182889996|gb|AAI65915.1| Rab5a protein [Danio rerio]
Length = 216
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 105/178 (58%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ ++A
Sbjct: 91 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQDAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
Y+ + ETSA + ++F+ ++K L ++ +S R D +A P
Sbjct: 151 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSEPQAAGANSGRSRGVDLTETAPP 208
>gi|346473575|gb|AEO36632.1| hypothetical protein [Amblyomma maculatum]
Length = 194
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 98/149 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S++ R++ F+ TIGASF + + + K +WDTAGQER+R++APMY
Sbjct: 19 GVGKSSILQRFVYNTFNSSAESTIGASFMMKNLVLHDRTFKFNIWDTAGQERYRALAPMY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SF A+++WV+EL+ + ++ + L + GNK DLE REV+
Sbjct: 79 YRGAAAAVIVYDITSMDSFNAVQSWVRELQLHGEQNIALGIAGNKCDLEDHREVSLATGE 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVS 264
Y+ G + ETSAL+ I+++F+ ++
Sbjct: 139 SYAHQHGAVFVETSALKATNIQELFMGIA 167
>gi|195433627|ref|XP_002064811.1| GK15003 [Drosophila willistoni]
gi|194160896|gb|EDW75797.1| GK15003 [Drosophila willistoni]
Length = 223
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 113/181 (62%), Gaps = 13/181 (7%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-GENKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+V+RY+ F+ T+ ASF + I + + + L +WDTAGQERF ++ P+Y
Sbjct: 24 VGKTSLVLRYMEDKFNSQNLSTLQASFVSKIIIMPDQRQALLNIWDTAGQERFHALGPIY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR ++ ALLV+DIT ++SF +K WV+ELK + + L +VGNK DL+ R V+ + AF
Sbjct: 84 YRGSDGALLVYDITDHNSFLKVKLWVRELKEMLGNDICLIIVGNKIDLDEQRVVDYDVAF 143
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPRG 295
Y++S+G Y ETSA ++G+ ++F +++ + L Q++ +TSA RG
Sbjct: 144 EYAQSVGARYLETSAKNNEGVTELFELLTQ--LILEQQT----------QAPLTSAKARG 191
Query: 296 V 296
V
Sbjct: 192 V 192
>gi|1710019|sp|P51154.1|RB22A_CANFA RecName: Full=Ras-related protein Rab-22A; Short=Rab-22
Length = 194
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 98/150 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F +I+PTIGASF T + K +WDTAGQE FR++APMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQEAFRALAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WVKEL+++ +V+ + GNK DL REV +A
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISR 164
>gi|390340614|ref|XP_786285.3| PREDICTED: ras-related protein Rab-31-like [Strongylocentrotus
purpuratus]
Length = 219
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 124/213 (58%), Gaps = 13/213 (6%)
Query: 79 MLVSNKIKVGLLSDKFVVGLSINSRVPNCFEANWFWLGVGKTSMVVRYIGKMFSHHISPT 138
+ VS I G++++ V CF N+ VGKTS+ R++ F + T
Sbjct: 2 LAVSGPIAYGIVAENMP-----QKDVKVCFLGNY---CVGKTSITKRFVKGRFDEEYTST 53
Query: 139 IGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIK 198
IGA+F + + + + +WDTAGQERFRS+AP+ YR+A AAL+V+DIT SF +
Sbjct: 54 IGAAFLSRSLYSQNIEYRFALWDTAGQERFRSLAPLTYRSAAAALIVYDITNQQSFDEVN 113
Query: 199 TWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIED 258
W+ EL+R+ E +++ V+GNK DLES R V+RE A Y+++ G ++ +SA QG+E+
Sbjct: 114 FWISELRRDGPEEILIYVIGNKVDLESYRVVDREVAESYAQTKGVFHFHSSAKTGQGVEE 173
Query: 259 VFLNV-----SKGLICLSQESLHTSSLRVYDSD 286
+F ++ +K I + H +++ V DSD
Sbjct: 174 IFYHICQMDSTKSSIKENGCRHHQNTVDVSDSD 206
>gi|392333087|ref|XP_003752788.1| PREDICTED: ras-related protein Rab-5A-like [Rattus norvegicus]
gi|392353206|ref|XP_003751425.1| PREDICTED: ras-related protein Rab-5A-like [Rattus norvegicus]
Length = 215
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SF+ K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMETSAKTPMNVNEIFMAIAKKL 181
>gi|123448163|ref|XP_001312814.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121894675|gb|EAX99884.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 199
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 93/149 (62%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKT +V + +FS +PT+GAS+ + NV +V+LQ+WDTAGQER+R M PMYY
Sbjct: 18 VGKTCIVRQATTGVFSEDSAPTLGASYVSKLANVNGTEVRLQIWDTAGQERYRGMTPMYY 77
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AL+V+ +T SF ++ W+ L+ N + + L ++ NK D E R V+ E+
Sbjct: 78 RGAQTALIVYSVTDAESFESVDGWLNSLRENAEPDITLFLLANKCDCEGDRVVSAEQGQE 137
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSK 265
+KS+G +YE SA Q IEDVF ++ K
Sbjct: 138 KAKSMGAHFYEVSAKTGQCIEDVFTDIPK 166
>gi|388858617|emb|CCF47914.1| probable GTP-binding protein ypt5 [Ustilago hordei]
Length = 223
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 105/170 (61%), Gaps = 5/170 (2%)
Query: 103 RVPNCFEANWFWLG---VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-GENKVKLQ 158
R P + LG VGK+S+V+R++ F + TIGA+F T +++ + VK +
Sbjct: 5 RNPRMLQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVSLDAQTTVKFE 64
Query: 159 VWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVG 218
+WDTAGQER++S+APMYYRNAN A++V+DITQ S K W++EL+R D +++ + G
Sbjct: 65 IWDTAGQERYKSLAPMYYRNANCAVVVYDITQPSSLDKAKAWIRELQRQADPNIIIALAG 124
Query: 219 NKTDLESSRE-VNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
NK DL S+R + EEA Y++ + ETSA + ++F +++ L
Sbjct: 125 NKADLASTRRAIPTEEADKYAQEEELLFLETSAKDSSNVSELFTMIARKL 174
>gi|344229410|gb|EGV61296.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
gi|344229411|gb|EGV61297.1| hypothetical protein CANTEDRAFT_116954 [Candida tenuis ATCC 10573]
Length = 213
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 99/155 (63%), Gaps = 7/155 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K +G+ +K ++WDTAGQERF S+APMY
Sbjct: 19 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDKTIKYEIWDTAGQERFASLAPMY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL-------ESSRE 228
YRNA AAL+V+DIT+ SF + WVKEL + + + +VGNK DL ++ R+
Sbjct: 79 YRNAQAALVVYDITKPASFLKARHWVKELHEQASKDITIALVGNKYDLVEDENDGDTLRK 138
Query: 229 VNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNV 263
V+ EE ++ G ++ETSA + +VF+ +
Sbjct: 139 VSVEEGQKLAEDEGLLFFETSAKTSYNVNEVFVGI 173
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K +G+ +K ++
Sbjct: 19 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDKTIKYEI 62
>gi|74834229|emb|CAI44488.1| rab_A73 [Paramecium tetraurelia]
Length = 213
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 97/147 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+++RY +F + TIG F + K+ + + + LQ+WDTAGQE FRS+A +
Sbjct: 20 GVGKSSILLRYTKDLFQRDYNVTIGLEFASKKVTIQDTALTLQIWDTAGQEAFRSIARSF 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRN+ A ++VF +T SF ++ WVK+++ N D+ +V+ +VGN +DLE+ R V+ EEA
Sbjct: 80 YRNSAAIIIVFKLTSRESFLSVPGWVKDIQDNSDQGVVISMVGNMSDLEAERTVSNEEAR 139
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLN 262
+ Y+ETSA Q I+D+F+N
Sbjct: 140 QKAMEYNALYFETSAATGQNIDDIFIN 166
>gi|15235113|ref|NP_193699.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|75337446|sp|Q9SN68.1|RAF2B_ARATH RecName: Full=Ras-related protein RABF2b; Short=AtRABF2b; AltName:
Full=Ras-related protein Ara-7; AltName:
Full=Ras-related protein Rab5B; Short=AtRab5B
gi|13878093|gb|AAK44124.1|AF370309_1 putative small GTP-binding protein [Arabidopsis thaliana]
gi|2853090|emb|CAA16940.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|7268760|emb|CAB78966.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|12964606|dbj|BAB32669.1| Ara7 [Arabidopsis thaliana]
gi|15450605|gb|AAK96574.1| AT4g19640/F24J7_190 [Arabidopsis thaliana]
gi|17104761|gb|AAL34269.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|332658807|gb|AEE84207.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 200
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 100/153 (65%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 VGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++VFD+T SF K WV+EL+ + +V+ + GNK+DL +R+V E+A
Sbjct: 79 YYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA ++++F +++ L
Sbjct: 139 QTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171
>gi|145552015|ref|XP_001461684.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831212|emb|CAI39263.1| rab_B73 [Paramecium tetraurelia]
gi|124429519|emb|CAK94311.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 97/147 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+++RY +F + TIG F + K+ + + + LQ+WDTAGQE FRS+A +
Sbjct: 20 GVGKSSILLRYTKDLFQRDYNVTIGLEFASKKVTIQDTALTLQIWDTAGQEAFRSIARSF 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRN+ A ++VF +T SF ++ WVK+++ N D+ +V+ +VGN +DLE+ R V+ EEA
Sbjct: 80 YRNSAAIIIVFKLTSRESFLSVPGWVKDIQDNSDQGVVISMVGNMSDLEAERTVSNEEAR 139
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLN 262
+ Y+ETSA Q I+D+F+N
Sbjct: 140 QKAMEYNALYFETSAATGQNIDDIFIN 166
>gi|384252326|gb|EIE25802.1| small rab-related GTPase [Coccomyxa subellipsoidea C-169]
Length = 199
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 99/153 (64%), Gaps = 2/153 (1%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F + TIGA+F T I E VK ++WDTAGQER+ S+APM
Sbjct: 18 MGAGKSSLVLRFVKGQFFDYQESTIGAAFLTKTIP--EKGVKFEIWDTAGQERYHSLAPM 75
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++VFDIT SFA K WVKEL+R + +++ + GNK DL + R V E+A
Sbjct: 76 YYRGAAAAVVVFDITNAESFAKAKNWVKELQRQGNPNMIMALAGNKADLAAQRAVTSEDA 135
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ ++ETSA + + +VF ++++ L
Sbjct: 136 KAYADENSLFFWETSAKTNVNVAEVFHDIAERL 168
>gi|194688230|gb|ACF78199.1| unknown [Zea mays]
gi|195637900|gb|ACG38418.1| ras-related protein RHN1 [Zea mays]
gi|413933484|gb|AFW68035.1| Ras protein RHN1 [Zea mays]
Length = 203
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 99/154 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 20 VGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPM 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL+ ++ ++ + GNK D+ +R+V EEA
Sbjct: 80 YYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNQNTIVALAGNKADMLDARQVPAEEA 139
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++ G + ETSA + D+F ++K L+
Sbjct: 140 KAYAQENGLFFMETSAKTAINVNDIFYEIAKKLL 173
>gi|146420668|ref|XP_001486288.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 212
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 97/157 (61%), Gaps = 9/157 (5%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K +GE +K ++WDTAGQERF S+APMY
Sbjct: 19 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQERFASLAPMY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL---------ESS 226
YRNA AAL+V+DIT+ SF + WVKEL + + + +VGNK DL S
Sbjct: 79 YRNAQAALVVYDITKPASFIKARHWVKELHEQASKDITIALVGNKHDLVEDDNDGDDSSL 138
Query: 227 REVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNV 263
R+V+ EE + G ++ETSA + +VF+ +
Sbjct: 139 RKVSIEEGQKLADEEGLLFFETSAKTAYNVNEVFVGI 175
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K +GE +K ++
Sbjct: 19 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEI 62
>gi|348513153|ref|XP_003444107.1| PREDICTED: ras-related protein Rab-5A-like [Oreochromis niloticus]
Length = 216
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ ++A
Sbjct: 91 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQDAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 SYADDNSLLFMETSAKTSMNVNEIFMAIAKRL 182
>gi|196003798|ref|XP_002111766.1| hypothetical protein TRIADDRAFT_24046 [Trichoplax adhaerens]
gi|190585665|gb|EDV25733.1| hypothetical protein TRIADDRAFT_24046, partial [Trichoplax
adhaerens]
Length = 148
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 93/140 (66%), Gaps = 1/140 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+RY+ + + TIGASFFT ++V K LQ+WDTAGQERFRSM P+YY
Sbjct: 1 VGKSSIVLRYLKRRNPLACNSTIGASFFTNIVHVDNIKFHLQIWDTAGQERFRSMTPLYY 60
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNV-DEPLVLCVVGNKTDLESSREVNREEAF 235
R A AA++V+DIT +F A K W++EL +N D+ L+L +VGNK+DL R V++E+
Sbjct: 61 RKAQAAIIVYDITDSSTFEATKGWIEELHKNTSDKSLILGIVGNKSDLADQRVVSKEDGL 120
Query: 236 HYSKSIGGTYYETSALQDQG 255
+ Y ETSA +G
Sbjct: 121 ELAHDNSAIYMETSAATGEG 140
>gi|190345894|gb|EDK37861.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 212
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 97/157 (61%), Gaps = 9/157 (5%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K +GE +K ++WDTAGQERF S+APMY
Sbjct: 19 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQERFASLAPMY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL---------ESS 226
YRNA AAL+V+DIT+ SF + WVKEL + + + +VGNK DL S
Sbjct: 79 YRNAQAALVVYDITKPASFIKARHWVKELHEQASKDITIALVGNKHDLVEDDNDGDDSSL 138
Query: 227 REVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNV 263
R+V+ EE + G ++ETSA + +VF+ +
Sbjct: 139 RKVSIEEGQKLADEEGLLFFETSAKTAYNVNEVFVGI 175
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K +GE +K ++
Sbjct: 19 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEI 62
>gi|302409676|ref|XP_003002672.1| GTP-binding protein ypt5 [Verticillium albo-atrum VaMs.102]
gi|261358705|gb|EEY21133.1| GTP-binding protein ypt5 [Verticillium albo-atrum VaMs.102]
Length = 241
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 101/154 (65%), Gaps = 5/154 (3%)
Query: 119 KTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMYYR 177
++S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APMYYR
Sbjct: 53 QSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMYYR 112
Query: 178 NANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVNREE 233
NAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL R V+ +
Sbjct: 113 NANCAVVVYDITQSSSLDKAKAWVKELQRQANENIIIALAGNKLDLVTEQPDKRAVSTAD 172
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
A Y+K G ++ETSA + + ++F ++K L
Sbjct: 173 AEAYAKEAGLLFFETSAKTAENVRELFTAIAKKL 206
>gi|396468450|ref|XP_003838176.1| hypothetical protein LEMA_P117000.1 [Leptosphaeria maculans JN3]
gi|312214743|emb|CBX94697.1| hypothetical protein LEMA_P117000.1 [Leptosphaeria maculans JN3]
Length = 362
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 101/160 (63%), Gaps = 8/160 (5%)
Query: 116 GVGKTSMVVRYI---GKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSM 171
VGK+S+V+R++ F + TIGA+F T I + EN VK ++WDTAGQER++S+
Sbjct: 167 AVGKSSLVLRFVKACADQFDDYRESTIGAAFLTQTIALDENTTVKFEIWDTAGQERYKSL 226
Query: 172 APMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSR 227
APMYYRNAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL R
Sbjct: 227 APMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNKLDLVTESPDKR 286
Query: 228 EVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+ +A Y++ G ++ETSA + + ++F ++K L
Sbjct: 287 AITTADAEQYAREAGLLFFETSAKTSENVRELFTAIAKKL 326
>gi|32492054|gb|AAP85299.1| Rab5, partial [Babesia bovis]
Length = 208
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 102/151 (67%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+ R++ F TIGA+F T +++ + VK ++WDTAGQER+R++APMYY
Sbjct: 29 VGKSSLDGRFVRNTFLEFQESTIGAAFMTQSVSLDDCTVKFEIWDTAGQERYRTLAPMYY 88
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R ++AA++V+DIT + SF K W++EL+ +V +VL + GNK DL+SSREV+RE A
Sbjct: 89 RGSSAAVIVYDITMHESFQQAKGWIQELQAHVGPNVVLALAGNKVDLDSSREVSREVAEE 148
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
++ + + ETSA ++++F ++K +
Sbjct: 149 FAGANNCIFMETSAKNGDMVQELFTEIAKAI 179
>gi|4741844|gb|AAD28731.1|AF112964_1 small GTP-binding protein [Triticum aestivum]
Length = 209
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 99/158 (62%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 25 VGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPM 84
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL+ + V+ + GNK D+ +R+V EEA
Sbjct: 85 YYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTVMALAGNKADMLEARQVPVEEA 144
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++ G + ETSA + DVF ++K L+ Q
Sbjct: 145 TTYAQGNGLFFIETSAKTAINVNDVFYELAKRLLAGQQ 182
>gi|348509081|ref|XP_003442080.1| PREDICTED: ras-related protein Rab-5C-like [Oreochromis niloticus]
Length = 220
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 91 YRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIAIAGNKADLANKRAVDFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|123482533|ref|XP_001323810.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|67944359|gb|AAY83815.1| small Rab GTPase Rab5a [Trichomonas vaginalis]
gi|121906682|gb|EAY11587.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 201
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 122/193 (63%), Gaps = 10/193 (5%)
Query: 106 NCFEANWFWLG---VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDT 162
N EA LG VGK+S+V FS + TIGA+F + IN+G+ ++KLQ+WDT
Sbjct: 8 NLKEAKVVMLGSTTVGKSSIVTMLTRGSFSESCASTIGAAFLSKTINLGDQELKLQIWDT 67
Query: 163 AGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTD 222
G ER+R+MAPMY++NANAA++V+DIT S+ +++W+KEL+ +++ + GNK+D
Sbjct: 68 GGSERYRAMAPMYFQNANAAIIVYDITSSTSYNDVESWLKELREKGPASIIIALAGNKSD 127
Query: 223 LESSREVNREEAFHYSKSIG-GTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLR 281
L+ R V E+A +++ G + ETSAL+ I+++F +V+ + +++ ++ T+
Sbjct: 128 LDQQRCVATEDAQSFAQKHGIPIFKETSALKGINIQEIFTDVA---VAIARGAVSTAP-- 182
Query: 282 VYDSDNITSANPR 294
+ +T +NP+
Sbjct: 183 -AEQVTLTESNPK 194
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 330 NCFEANWFWLG---VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
N EA LG VGK+S+V FS + TIGA+F + IN+G+ ++KLQ+
Sbjct: 8 NLKEAKVVMLGSTTVGKSSIVTMLTRGSFSESCASTIGAAFLSKTINLGDQELKLQI 64
>gi|50288533|ref|XP_446696.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526004|emb|CAG59623.1| unnamed protein product [Candida glabrata]
Length = 215
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 107/168 (63%), Gaps = 9/168 (5%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFF--TAKINVGENKV--KLQVWDTAGQERFRSMA 172
VGK+S+V R++ F TIGA+F T KI G V K ++WDTAGQER++S+A
Sbjct: 14 VGKSSIVHRFVKDTFDELRESTIGAAFLSQTVKIKDGNEDVVIKFEIWDTAGQERYKSLA 73
Query: 173 PMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNV-DEPLVLCVVGNKTDL----ESSR 227
PMYYRNANAAL+V+D+TQ S + ++WV+EL+ V DE LV+ +VGNK D+ ES+R
Sbjct: 74 PMYYRNANAALVVYDVTQPDSLSKAQSWVQELQNKVGDEELVIYLVGNKVDIVEADESAR 133
Query: 228 EVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
++ EE Y+++ + E SA G++D+F + + L + SL
Sbjct: 134 KIETEEGAEYAQAQKLLFKEVSAKTGAGVKDIFQEIGEQLYSTKKASL 181
>gi|123392739|ref|XP_001300294.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736296|gb|AAX97477.1| small Rab GTPase RabF2 [Trichomonas vaginalis]
gi|121881309|gb|EAX87364.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 193
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 97/148 (65%)
Query: 118 GKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYYR 177
GKTS+V RY+ F + ++ A+FF + +G + L++WDTAGQERFRS+ PMYYR
Sbjct: 19 GKTSIVQRYVNGQFMINSVSSMQAAFFQKNVMIGGKEQTLEIWDTAGQERFRSLTPMYYR 78
Query: 178 NANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFHY 237
+A A++VFDIT +SF+ K W+ ELK + + + L +VGNK+DLE R V EA Y
Sbjct: 79 DARVAIVVFDITDANSFSKAKQWINELKSSRGDSISLVLVGNKSDLEFIRVVQMSEAKQY 138
Query: 238 SKSIGGTYYETSALQDQGIEDVFLNVSK 265
+K + Y+ETSA IE+VF+ V++
Sbjct: 139 AKLLDIPYFETSAKTGVNIEEVFIQVAQ 166
>gi|41055758|ref|NP_957264.1| RAB5A, member RAS oncogene family, b [Danio rerio]
gi|29124637|gb|AAH49057.1| RAB5A, member RAS oncogene family like [Danio rerio]
Length = 216
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R ++ ++A
Sbjct: 91 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANKRALDFQDAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 SYADDNSLLFMETSAKTSMNVSEIFMAIAKKL 182
>gi|367017001|ref|XP_003682999.1| hypothetical protein TDEL_0G04210 [Torulaspora delbrueckii]
gi|359750662|emb|CCE93788.1| hypothetical protein TDEL_0G04210 [Torulaspora delbrueckii]
Length = 222
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 115/189 (60%), Gaps = 5/189 (2%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ R++ F H TIG F + + + + ++LQ+WDTAGQERFRS+ P Y
Sbjct: 22 GVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELK-RNVDEPLVLCVVGNKTDLESSREVNREEA 234
R++ A++V+DIT+ SF I W++++K +E ++LC+VGNK+DL R+V+ EE
Sbjct: 82 IRDSRVAIVVYDITKKKSFEFIDKWIEDVKNERGEENVILCIVGNKSDLADERQVSTEEG 141
Query: 235 FHYSKSIGGT-YYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNI--TSA 291
+K +G + ETS ++++F ++K L QE H +L +S+ + A
Sbjct: 142 EAKAKLLGAKIFMETSTKAGHNVKNLFKKIAKSLPEF-QEGQHAGALEGDNSNEVGKKEA 200
Query: 292 NPRGVVEIT 300
N GV++IT
Sbjct: 201 NGSGVIDIT 209
>gi|399163161|gb|AFP33156.1| rab-21, partial [Caenorhabditis elegans]
Length = 206
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 96/152 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ FS TI ASF +NV + + L +WDTAGQE++ ++ P+YY
Sbjct: 22 VGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQEKYHALGPIYY 81
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R +N LLVFDIT SF +K WV E+K + + +VGNK DLE R+V R++A
Sbjct: 82 RGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKIDLEEERQVTRQDAEA 141
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++S G Y ETSA + GI D F +++ +I
Sbjct: 142 YAESEGALYMETSAQDNVGISDAFESLTAKMI 173
>gi|17535871|ref|NP_495854.1| Protein RAB-21 [Caenorhabditis elegans]
gi|3879231|emb|CAA91296.1| Protein RAB-21 [Caenorhabditis elegans]
Length = 207
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 96/152 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ FS TI ASF +NV + + L +WDTAGQE++ ++ P+YY
Sbjct: 23 VGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQEKYHALGPIYY 82
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R +N LLVFDIT SF +K WV E+K + + +VGNK DLE R+V R++A
Sbjct: 83 RGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKIDLEEERQVTRQDAEA 142
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++S G Y ETSA + GI D F +++ +I
Sbjct: 143 YAESEGALYMETSAQDNVGISDAFESLTAKMI 174
>gi|452847264|gb|EME49196.1| hypothetical protein DOTSEDRAFT_68068 [Dothistroma septosporum
NZE10]
Length = 224
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 101/157 (64%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I + E VK ++WDTAGQER++S+APM
Sbjct: 28 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDTAGQERYKSLAPM 87
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL + R V
Sbjct: 88 YYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIIIALAGNKADLVAEQPDKRAVP 147
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y+K ++ETSA + ++++F ++K L
Sbjct: 148 TTDAEAYAKEANLLFFETSAKTAENVKELFTAIAKKL 184
>gi|149235389|ref|XP_001523573.1| vacuolar protein sorting-associated protein 21 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146452982|gb|EDK47238.1| vacuolar protein sorting-associated protein 21 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 221
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 101/163 (61%), Gaps = 15/163 (9%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K +G+ +K ++WDTAGQERF S+APMY
Sbjct: 20 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDRTIKYEIWDTAGQERFASLAPMY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTD-------LESS-- 226
YRNA AA++V+DIT+ SF + WVKEL + +++ +VGNK D LES+
Sbjct: 80 YRNAQAAIVVYDITKPASFIKARHWVKELHEQANRDIIIALVGNKYDLVEDEPELESAAE 139
Query: 227 ------REVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNV 263
R+V++EE + G ++ETSA + DVF+ +
Sbjct: 140 GNTDLLRKVSKEEGQALADEEGLLFFETSAKTSYNVNDVFVAI 182
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K +G+ +K ++
Sbjct: 20 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDRTIKYEI 63
>gi|348588935|ref|XP_003480220.1| PREDICTED: ras-related protein Rab-5A-like [Cavia porcellus]
Length = 215
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIG+ F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGSCFSTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + ++F+ ++K L
Sbjct: 150 SYAEDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|357119478|ref|XP_003561466.1| PREDICTED: ras-related protein RABF2b-like [Brachypodium
distachyon]
Length = 203
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 98/154 (63%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 20 VGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVSDETVKFEIWDTAGQERYHSLAPM 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DI+ SF K WV+EL+ + V+ + GNK DL +R+V EEA
Sbjct: 80 YYRGAAAAIVVYDISNQASFIRAKKWVQELQAQGNPNTVVALAGNKADLLETRQVQIEEA 139
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++ G + ETSA + D+F ++K L+
Sbjct: 140 KTYAQENGLFFMETSAKTATNVNDIFYEIAKRLL 173
>gi|339252708|ref|XP_003371577.1| GTP-binding protein Ypt5 [Trichinella spiralis]
gi|316968152|gb|EFV52478.1| GTP-binding protein Ypt5 [Trichinella spiralis]
Length = 232
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 95/152 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R+ F TIGA+F T + + + VK ++WDTAGQER++S+APMY
Sbjct: 45 AVGKSSLVLRFAKGQFHEFQESTIGAAFLTQTVCMDDMTVKFEIWDTAGQERYQSLAPMY 104
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SF K WV EL+R +V+ + GNK DL SSR+V EA
Sbjct: 105 YRAARAAIVVYDITNQKSFTKAKNWVNELQRQALPNIVIALAGNKADLASSRKVEFNEAQ 164
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+F ++K L
Sbjct: 165 AYAEENGLLFMETSAKTAMNVNDIFWAIAKEL 196
>gi|346972267|gb|EGY15719.1| GTP-binding protein ypt5 [Verticillium dahliae VdLs.17]
Length = 243
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 101/154 (65%), Gaps = 5/154 (3%)
Query: 119 KTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMYYR 177
++S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APMYYR
Sbjct: 55 QSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMYYR 114
Query: 178 NANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVNREE 233
NAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL R V+ +
Sbjct: 115 NANCAVVVYDITQSSSLDKAKAWVKELQRQANENIIIALAGNKLDLVTEQPDKRAVSTAD 174
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
A Y+K G ++ETSA + + ++F ++K L
Sbjct: 175 AEAYAKEAGLLFFETSAKTAENVRELFTAIAKKL 208
>gi|213513268|ref|NP_001133617.1| Ras-related protein Rab-5A [Salmo salar]
gi|197631797|gb|ACH70622.1| member RAS oncogene family [Salmo salar]
gi|209154698|gb|ACI33581.1| Ras-related protein Rab-5A [Salmo salar]
Length = 216
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R ++ ++A
Sbjct: 91 YRGAQAAIVVYDITNKESFARAKNWVKELQRQASPNIVIALAGNKADLANKRALDFQDAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 SYADDNSLLFMETSAKTSMNVNEMFMAIAKKL 182
>gi|123224924|ref|XP_001285722.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121849845|gb|EAX72792.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 190
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 101/161 (62%), Gaps = 2/161 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
G GKTS++++++ +F PTIGASF + I + + + + VWDTAGQE +R + PMY
Sbjct: 17 GAGKTSLIMQFVNGIFDGLTKPTIGASFVSKSIEIDNSLLNISVWDTAGQELYRGLTPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNA A++VFD+T SF + WV EL N +V C+ GNK DLE +R ++ E A
Sbjct: 77 YRNAAVAIVVFDVTNKDSFEQVSGWVSELHENTSNAIV-CICGNKIDLE-NRIISTESAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLH 276
+ ++ +YYETSA +G++ +FL +S ++ ++E H
Sbjct: 135 ELANNLNLSYYETSAATGEGVDKMFLELSLQILSNNKELAH 175
>gi|73535759|pdb|1Z0D|A Chain A, Gdp-bound Rab5c Gtpase
gi|73535760|pdb|1Z0D|C Chain C, Gdp-bound Rab5c Gtpase
Length = 167
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 95/152 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAG ER+ S+APMY
Sbjct: 15 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGLERYHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 75 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 135 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 166
>gi|358398111|gb|EHK47469.1| hypothetical protein TRIATDRAFT_298602 [Trichoderma atroviride IMI
206040]
Length = 229
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 109/200 (54%), Gaps = 21/200 (10%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++WDTAGQERF S+APMY
Sbjct: 20 AVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLES---------- 225
YRNA AAL+V+DIT+ S + WV EL+R +V+ +VGNK DL
Sbjct: 80 YRNAQAALVVYDITKPTSLVKARHWVAELQRQASPGIVIALVGNKLDLAGESQSTSEEGD 139
Query: 226 ------SREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSS 279
+R+V EEA Y++ G ++ETSA + +VF ++ + S +S S
Sbjct: 140 GEDGGDARKVPTEEAQSYAEEEGLLFFETSAKTGHNVTEVFTAIANAIPETSLKSTRGSG 199
Query: 280 L-----RVYDSDNITSANPR 294
R + + + PR
Sbjct: 200 AAGTANRAGEEQRVNLSGPR 219
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++
Sbjct: 20 AVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEI 63
>gi|225708202|gb|ACO09947.1| Ras-related protein Rab-5C [Osmerus mordax]
Length = 220
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 97/151 (64%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +F K WVKEL+R +V+ + GNK D+ + R ++++EA
Sbjct: 92 RGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADIANKRAIDQQEAQA 151
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 152 YADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|145545648|ref|XP_001458508.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834260|emb|CAI44498.1| rab_C41 [Paramecium tetraurelia]
gi|124426328|emb|CAK91111.1| unnamed protein product [Paramecium tetraurelia]
Length = 210
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 101/173 (58%), Gaps = 3/173 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ M++RY F+++ TIG F T + +GEN VKLQ+WDTAGQ+RFR++ Y
Sbjct: 20 GVGKSCMLMRYSENQFTNNFYNTIGVDFKTKTVAIGENNVKLQIWDTAGQDRFRTITCSY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ++V+DIT SF +KTW+ E+ + E + +VGNK D+ REV+ EE
Sbjct: 80 YRGAQGIIIVYDITDRESFENVKTWIAEIDKYASESVNRMLVGNKADITERREVSYEEGL 139
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNI 288
S+ +YETSA IE F +++K ++ +H S V + N+
Sbjct: 140 ELSRQYQFPFYETSAKSSINIEAAFTHITKNIL---NREIHNSKAVVRKTSNM 189
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK+ M++RY F+++ TIG F T + +GEN VKLQ+
Sbjct: 20 GVGKSCMLMRYSENQFTNNFYNTIGVDFKTKTVAIGENNVKLQI 63
>gi|209147261|gb|ACI32882.1| Ras-related protein Rab-5C [Salmo salar]
Length = 219
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 91 YRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADLANKRAVDFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|225707110|gb|ACO09401.1| Ras-related protein Rab-5C [Osmerus mordax]
Length = 219
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +F K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 92 RGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADLANKRAVDFQEAQA 151
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 152 YADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|346323143|gb|EGX92741.1| Rab5-like protein ypt5 [Cordyceps militaris CM01]
Length = 220
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 100/157 (63%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F TIGA+F T I++ E VK ++WDTAGQER++S+APM
Sbjct: 29 AVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDETTTVKFEIWDTAGQERYKSLAPM 88
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL R +
Sbjct: 89 YYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVTEQPDKRAIP 148
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y+K G ++ETSA + + ++F +++ L
Sbjct: 149 AADAEAYAKEAGLLFFETSAKTAENVPELFTAIARKL 185
>gi|323454773|gb|EGB10642.1| hypothetical protein AURANDRAFT_22182 [Aureococcus anophagefferens]
Length = 210
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 104/163 (63%), Gaps = 5/163 (3%)
Query: 117 VGKTSMVVRYIGK----MFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSM 171
VGKTS+++RY+ +S T+ AS+ ++++ + L +WDTAGQERF ++
Sbjct: 16 VGKTSILLRYVKGERVPAYSDRQVSTLQASYLDKRLSLRAGQSASLSIWDTAGQERFHAL 75
Query: 172 APMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNR 231
P+YYR+A+ ALLV+DIT + SF ++ WV+EL++ V + + + + GNK DLESSR V
Sbjct: 76 GPIYYRDADGALLVYDITDFESFQKVRKWVRELRQIVGQEIAITIAGNKVDLESSRAVPE 135
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQES 274
EA Y+ S+G T+ TSA ++G+ED F +S+ + E+
Sbjct: 136 AEALDYAASVGATHVYTSAKLNKGLEDAFAELSERMATRRNET 178
>gi|73535746|pdb|1Z07|A Chain A, Gppnhp-Bound Rab5c G55q Mutant Gtpase
Length = 166
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 95/152 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TI A+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 15 AVGKSSLVLRFVKGQFHEYQESTIQAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V +EA
Sbjct: 75 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 135 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 166
>gi|115489706|ref|NP_001067340.1| Os12g0631100 [Oryza sativa Japonica Group]
gi|12057010|emb|CAC19792.1| RAB5A protein [Oryza sativa Indica Group]
gi|108863007|gb|ABG22102.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113649847|dbj|BAF30359.1| Os12g0631100 [Oryza sativa Japonica Group]
gi|215686475|dbj|BAG87736.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 98/154 (63%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 20 VGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPM 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL+ + ++ + GNK D+ +R+V EEA
Sbjct: 80 YYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMVEARQVPAEEA 139
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++ G + ETSA + DVF ++K L+
Sbjct: 140 KTYAQENGLFFMETSAKTAINVNDVFHEIAKRLL 173
>gi|348562462|ref|XP_003467029.1| PREDICTED: ras-related protein Rab-5C-like [Cavia porcellus]
Length = 216
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F K WVKEL+R +V+ + GNK DL S R V ++A
Sbjct: 91 YRGAQAAIVVYDITNTDTFLRAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQDAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + +VF+ ++K L
Sbjct: 151 AYAEDNSLLFMETSAKTAMNVNEVFMAIAKKL 182
>gi|221220906|gb|ACM09114.1| Ras-related protein Rab-5C [Salmo salar]
Length = 219
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 91 YRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADLANKRAVDFQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|319921858|gb|ADV78543.1| small GTP binding protein Rab5 [Oryza sativa Indica Group]
Length = 203
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 98/154 (63%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 20 VGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPM 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL+ + ++ + GNK D+ +R+V EEA
Sbjct: 80 YYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMIEARQVPAEEA 139
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++ G + ETSA + DVF ++K L+
Sbjct: 140 RTYAQENGLFFMETSAKTAINVNDVFHEIAKRLL 173
>gi|398403677|ref|XP_003853305.1| ras small GTPase related protein [Zymoseptoria tritici IPO323]
gi|339473187|gb|EGP88281.1| ras small GTPase related protein [Zymoseptoria tritici IPO323]
Length = 225
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 101/157 (64%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I + E VK ++WDTAGQER++S+APM
Sbjct: 28 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDTAGQERYKSLAPM 87
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS----REVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL + R V
Sbjct: 88 YYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIIIALAGNKADLVAEQPDKRAVP 147
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ ++ETSA + ++++F ++K L
Sbjct: 148 TADAEAYAREANLLFFETSAKTAENVKELFTAIAKKL 184
>gi|123460586|ref|XP_001316723.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121899438|gb|EAY04500.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 199
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 96/151 (63%), Gaps = 1/151 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKT + R++ F + PT+GAS+ T I+ + +L +WDTAGQE +RS+ PMYY
Sbjct: 19 VGKTCIASRFVKSSFLPNAVPTVGASYLTKTISFEKQVYELNIWDTAGQELYRSLTPMYY 78
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
RN +AA++VFDIT SFA+ W+ E++ ++PL L +VGNK DL +R+VN +
Sbjct: 79 RNCHAAIVVFDITNRQSFASASDWISEVRATGEKPL-LVLVGNKIDLNQNRQVNDTDGQE 137
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+ + Y ETSAL GIE +F N+ KGL
Sbjct: 138 LADQLECLYIETSALSGIGIELLFQNIIKGL 168
>gi|343426796|emb|CBQ70324.1| probable VPS21-Rab5-like GTPase involved in vacuolar protein
sorting [Sporisorium reilianum SRZ2]
Length = 268
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 106/186 (56%), Gaps = 34/186 (18%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K + + +K ++WDTAGQERF S+APMY
Sbjct: 34 AVGKSSVVLRFVQNDFQENKEPTIGAAFLTQKCRLEDRLIKFEIWDTAGQERFHSLAPMY 93
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL------------ 223
YRNA A+ +++D+T+ SF K+WVKEL+R + +V+ +VGNK DL
Sbjct: 94 YRNAQASAVIYDVTKASSFEKAKSWVKELQRQANPNIVIALVGNKIDLLKESSTSSAAAD 153
Query: 224 ----------------------ESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFL 261
+S R V ++EA Y++ G ++ETSA +G+ +VF
Sbjct: 154 EAEEDGDDDDETATTTPEASAGDSLRAVPKDEAEAYAREAGLLFFETSAKTGEGVVEVFT 213
Query: 262 NVSKGL 267
++K +
Sbjct: 214 EIAKKI 219
>gi|409051991|gb|EKM61467.1| hypothetical protein PHACADRAFT_248102 [Phanerochaete carnosa
HHB-10118-sp]
Length = 208
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 104/152 (68%), Gaps = 1/152 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER++S APMY
Sbjct: 17 VGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVALEDGTSVKFEIWDTAGQERYKSSAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNAN A++V+DITQ S ++W++EL+R D +++ + GNK+DL R+V++EEA
Sbjct: 77 YRNANCAVVVYDITQSASLEKARSWIRELQRQADPSIIIALCGNKSDLAVRRQVSQEEAK 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA +G+ ++F ++K L
Sbjct: 137 KYAEEEGLMWGETSAKSGEGVNEIFTEIAKKL 168
>gi|340382595|ref|XP_003389804.1| PREDICTED: ras-related protein Rab-22A-like [Amphimedon
queenslandica]
Length = 195
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 97/149 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R++ +FS T+GA+F T I V ++ + Q+WDTAGQE++R +APMY
Sbjct: 15 GVGKTCIVNRFVSDVFSDKEPLTVGAAFSTKTIQVNDHSILFQIWDTAGQEKYRGLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT SF +++W++EL++ LVL + GNK D+ SR+V +
Sbjct: 75 YRGSAAAVVVYDITNLKSFIEMQSWIQELRQLGPPNLVLAIAGNKLDISESRQVTASKGE 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVS 264
Y+KS+ + E SA D ++D+F ++
Sbjct: 135 EYAKSVNAIFMECSAKDDTNVKDLFSRIA 163
>gi|449551362|gb|EMD42326.1| GTP-binding protein RAB5 [Ceriporiopsis subvermispora B]
Length = 208
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 100/149 (67%), Gaps = 3/149 (2%)
Query: 120 TSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMYYRN 178
T++ +R++ F + TIGA+F T + + ++ VK ++WDTAGQER++ APMYYRN
Sbjct: 20 TTLFLRFVKDQFDDYRESTIGAAFLTQTVTLDDSSTVKFEIWDTAGQERYK--APMYYRN 77
Query: 179 ANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFHYS 238
AN A++V+DITQ S ++W++EL+R D +V+ + GNK+DL + R+V++EEA Y+
Sbjct: 78 ANCAVVVYDITQAASLEKARSWIRELQRQADPSIVIALCGNKSDLAARRQVSQEEAKKYA 137
Query: 239 KSIGGTYYETSALQDQGIEDVFLNVSKGL 267
G + ETSA +G+ D+F ++K L
Sbjct: 138 DEEGLMWGETSAKTGEGVTDIFTAIAKKL 166
>gi|73535775|pdb|1Z0J|A Chain A, Structure Of Gtp-Bound Rab22q64l Gtpase In Complex With
The Minimal Rab Binding Domain Of Rabenosyn-5
Length = 170
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 98/150 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S++ R++ F +I+PTIGASF T + K +WDTAG ERFR++APMY
Sbjct: 16 GVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLERFRALAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + AA++V+DIT+ +F+ +K WV+EL+++ +V+ + GNK DL REV +A
Sbjct: 76 YRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERDAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ SI + ETSA I ++F+ +S+
Sbjct: 136 DYADSIHAIFVETSAKNAININELFIEISR 165
>gi|47210398|emb|CAF91320.1| unnamed protein product [Tetraodon nigroviridis]
Length = 210
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 95/152 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 23 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK D+ + R V +EA
Sbjct: 83 YRGAQAAIVVYDITNSDTFARAKNWVKELQRQASPNIVIALAGNKADITNKRAVEHQEAQ 142
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 143 TYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 174
>gi|358055034|dbj|GAA98803.1| hypothetical protein E5Q_05491 [Mixia osmundae IAM 14324]
Length = 198
Score = 136 bits (343), Expect = 3e-29, Method: Composition-based stats.
Identities = 64/145 (44%), Positives = 99/145 (68%), Gaps = 2/145 (1%)
Query: 118 GKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMYY 176
GK+S+V++++ + FS + TIGA+F T +++ EN +K ++WDTAGQER+RS+APMYY
Sbjct: 18 GKSSLVLQFVKQEFSEYRESTIGAAFLTQIVSLDENTTIKFEIWDTAGQERYRSLAPMYY 77
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL-ESSREVNREEAF 235
R A AA++V+DIT + K WVKEL+R D +V+ + GNK DL E+ R + RE A
Sbjct: 78 RGAQAAVVVYDITSEGTLDKAKAWVKELQRQADPSIVIALAGNKVDLAETRRAIPRETAE 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVF 260
Y++ G ++ETSA + + ++F
Sbjct: 138 KYAQEEGLLFFETSAKEATNVTELF 162
>gi|308321755|gb|ADO28020.1| ras-related protein rab-5a [Ictalurus furcatus]
Length = 217
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 105/178 (58%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+++R++ F TIG +F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 32 AVGKSSLMLRFVKGQFHEFQESTIGGAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 91
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL S R ++ ++A
Sbjct: 92 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLASKRALDFQDAQ 151
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
Y+ + ETSA + ++F+ ++K L ++ +S+ R D +A P
Sbjct: 152 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQAPGSSAGRNRGVDLAETAQP 209
>gi|118482090|gb|ABK92976.1| unknown [Populus trichocarpa]
Length = 200
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 98/153 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 VGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DI+ SF K WV+EL+ + +V+ + GNK DL +R+V EEA
Sbjct: 79 YYRGAAAAIIVYDISNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVAAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++ G + ETSA + D+F ++K L
Sbjct: 139 QVFAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
>gi|154341312|ref|XP_001566609.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063932|emb|CAM40123.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 211
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPM 174
GVGK+S+V R + FS T+GASFF +V + V +WDTAGQERFRS+A M
Sbjct: 30 GVGKSSVVQRLMRNAFSARPHSTVGASFFRYTCSVADGTAVHFDIWDTAGQERFRSLAAM 89
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AAL+VFDI ++ K W +EL N E LV+ +VGNK DLES R+V EEA
Sbjct: 90 YYRGAAAALVVFDIVSADTYERAKHWARELHINSPETLVM-LVGNKKDLESERQVPVEEA 148
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+ +G Y+ETSA G+++ F V+ LI
Sbjct: 149 QQCAAEMGAMYHETSARSGDGVQEAFHAVAAKLI 182
>gi|576556|dbj|BAA07682.1| KIAA0118 [Homo sapiens]
Length = 161
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 88/119 (73%)
Query: 154 KVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLV 213
+V L +WDTAGQERF ++ P+YYR++N A+LV+DIT SF +K WVKEL++ + +
Sbjct: 3 RVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEIC 62
Query: 214 LCVVGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
LC+VGNK DLE R V+ +EA Y++S+G +Y TSA Q++GIE++FL++ K +I +Q
Sbjct: 63 LCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 121
>gi|302833012|ref|XP_002948070.1| RabF/Rab5 [Volvox carteri f. nagariensis]
gi|300266872|gb|EFJ51058.1| RabF/Rab5 [Volvox carteri f. nagariensis]
Length = 203
Score = 136 bits (343), Expect = 3e-29, Method: Composition-based stats.
Identities = 66/153 (43%), Positives = 99/153 (64%), Gaps = 2/153 (1%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+RY+ F + + T+GA+F T + E VK ++WDTAGQER+ S+APM
Sbjct: 22 MGSGKSSLVLRYVKGQFFDYQASTVGAAFLTKTLP--ELNVKFEIWDTAGQERYHSLAPM 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K+WV+EL+R + +++ + GNK DLES R V+ EE
Sbjct: 80 YYRGAAAAIIVYDITSPDSFTRAKSWVRELQRQGNPVMIMALAGNKADLESQRAVSVEEG 139
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G Y ETSA + ++F +++ L
Sbjct: 140 QAYAAENGLYYLETSAKTAANVNELFEEIARKL 172
>gi|164661221|ref|XP_001731733.1| hypothetical protein MGL_1001 [Malassezia globosa CBS 7966]
gi|159105634|gb|EDP44519.1| hypothetical protein MGL_1001 [Malassezia globosa CBS 7966]
Length = 220
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 102/153 (66%), Gaps = 2/153 (1%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMY 175
VGK+S+ +R++ F + TIGA+F T + + +KL++WDTAGQER++S+APMY
Sbjct: 17 VGKSSVALRFVKDQFEDYRESTIGAAFLTQTVRRQDGATIKLEIWDTAGQERYKSLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL-ESSREVNREEA 234
YRNA+ AL+V+DIT+ SF K+W++EL+R+ D + + +VGNK DL E+SR V+ E+
Sbjct: 77 YRNAHCALVVYDITEQESFENAKSWIRELQRHADANITIALVGNKLDLAETSRTVSAEDG 136
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ S G + ETSA + ++F V+ L
Sbjct: 137 QKYADSEGLMFMETSAKTPTNVTELFTLVANKL 169
>gi|19114819|ref|NP_593907.1| GTPase Ypt5 [Schizosaccharomyces pombe 972h-]
gi|549812|sp|P36586.1|YPT5_SCHPO RecName: Full=GTP-binding protein ypt5
gi|396079|emb|CAA80223.1| ypt5 protein [Schizosaccharomyces pombe]
gi|2389005|emb|CAB11737.1| GTPase Ypt5 [Schizosaccharomyces pombe]
Length = 211
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 113/180 (62%), Gaps = 4/180 (2%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T + + EN VKL++WDTAGQER++S+APM
Sbjct: 24 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPM 83
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL-ESSREVNREE 233
YYRNAN A++V+DITQ S K+W+KEL+R E +V+ + GNK DL + R V + +
Sbjct: 84 YYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRAVEKAD 143
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
A Y+ ++ETSA + + ++F ++K L ++ L+ + V N++ A P
Sbjct: 144 AEAYAAEANLLFFETSAKTAENVNELFTAIAKKLPL--EDKLNQARGAVNRGVNLSEARP 201
>gi|295789553|pdb|3MJH|A Chain A, Crystal Structure Of Human Rab5a In Complex With The C2h2
Zinc Finger Of Eea1
gi|295789555|pdb|3MJH|C Chain C, Crystal Structure Of Human Rab5a In Complex With The C2h2
Zinc Finger Of Eea1
Length = 168
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 95/152 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAG ER+ S+APMY
Sbjct: 15 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGLERYHSLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 75 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 135 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 166
>gi|189202136|ref|XP_001937404.1| GTP-binding protein YPT52 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187984503|gb|EDU49991.1| GTP-binding protein YPT52 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 218
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 102/153 (66%), Gaps = 5/153 (3%)
Query: 120 TSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMYYRN 178
+S+V+R++ F + TIGA+F T I + EN VK ++WDTAGQER++S+APMYYRN
Sbjct: 30 SSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEIWDTAGQERYKSLAPMYYRN 89
Query: 179 ANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL--ES--SREVNREEA 234
AN A++V+DITQ S K WVKEL+R +E +++ + GNK DL ES R ++ +A
Sbjct: 90 ANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNKLDLVTESPDKRAISTADA 149
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G ++ETSA + ++++F ++K L
Sbjct: 150 EQYAREAGLLFFETSAKTCENVKELFTAIAKKL 182
>gi|171686920|ref|XP_001908401.1| hypothetical protein [Podospora anserina S mat+]
gi|170943421|emb|CAP69074.1| unnamed protein product [Podospora anserina S mat+]
Length = 231
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 100/169 (59%), Gaps = 17/169 (10%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++WDTAGQERF S+APMY
Sbjct: 22 AVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL------------ 223
YRNA AAL+V+D+T+ S K WV EL+R +V+ +VGNK DL
Sbjct: 82 YRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTNDSAGGDGEGA 141
Query: 224 -----ESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
E +R+V EEA Y++ G ++ETSA + +VF ++ +
Sbjct: 142 GVGDGEDARKVTTEEAKSYAEEEGLLFFETSAKTGYNVTEVFTAIANAI 190
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++
Sbjct: 22 AVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEI 65
>gi|41393159|ref|NP_958909.1| ras-related protein Rab-5C [Danio rerio]
gi|28277724|gb|AAH45466.1| RAB5C, member RAS oncogene family [Danio rerio]
gi|41351014|gb|AAH65634.1| RAB5C, member RAS oncogene family [Danio rerio]
gi|182891710|gb|AAI65047.1| Rab5c protein [Danio rerio]
Length = 221
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 33 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYY 92
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +F K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 93 RGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADLANKRAVDFQEAQA 152
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 153 YADDNSLLFMETSAKTAMNVNEIFMAIAKKL 183
>gi|440290249|gb|ELP83675.1| rab5, putative [Entamoeba invadens IP1]
Length = 194
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 99/151 (65%), Gaps = 1/151 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R + TIGA+F T + V ++ +K + WDTAGQER+ S+ PMYY
Sbjct: 19 VGKSSIVLRVCKGEYKEFQENTIGAAFLTKTLIVDKDTIKFECWDTAGQERYHSLTPMYY 78
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R +NAAL+VFDIT S+A K WV EL+ + ++ ++ +VGNK DLE SR V +E+A
Sbjct: 79 RGSNAALVVFDITSDSSYAQAKKWVDELRESANDTMIF-LVGNKCDLEGSRSVTKEDAEA 137
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++SI Y ETSA + + ++F V++ L
Sbjct: 138 YARSISVDYIETSAKSNINVSELFDLVARKL 168
>gi|367050914|ref|XP_003655836.1| hypothetical protein THITE_2171042 [Thielavia terrestris NRRL 8126]
gi|347003100|gb|AEO69500.1| hypothetical protein THITE_2171042 [Thielavia terrestris NRRL 8126]
Length = 233
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 100/171 (58%), Gaps = 19/171 (11%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++WDTAGQERF S+APMY
Sbjct: 22 AVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLES---------- 225
YRNA AAL+V+D+T+ S K WV EL+R +V+ +VGNK DL +
Sbjct: 82 YRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTNTGPGGGGDAD 141
Query: 226 ---------SREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+R+V EEA Y++ G +YETSA + +VF ++ +
Sbjct: 142 GAGAEDSGDARKVTTEEAKTYAEEEGLLFYETSAKTGYNVTEVFTAIANAI 192
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++
Sbjct: 22 AVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEI 65
>gi|209156126|gb|ACI34295.1| Ras-related protein Rab-5C [Salmo salar]
Length = 220
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFQEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F K WVKEL+R +V+ + GNK D+ + R V+ +EA
Sbjct: 91 YRGAQAAIVVYDITNRDTFTRAKNWVKELQRQASPNIVIALAGNKADVANKRAVDLQEAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|326491951|dbj|BAJ98200.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 98/158 (62%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 25 VGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPM 84
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT F K WV+EL+ + V+ + GNK D+ +R+V EEA
Sbjct: 85 YYRGAAAAIVVYDITNAAPFTRAKKWVQELQAQGNPNTVMALAGNKADMLEARQVPVEEA 144
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQ 272
Y++ G + ETSA + DVF ++K L+ Q
Sbjct: 145 TTYAQENGLFFMETSAKTAINVNDVFYEIAKRLLAGQQ 182
>gi|348511330|ref|XP_003443197.1| PREDICTED: ras-related protein Rab-5A-like [Oreochromis niloticus]
Length = 216
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 104/178 (58%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SF K WVKEL+R +V+ + GNK DL + R ++ ++A
Sbjct: 91 YRGAQAAIVVYDITNEESFVRAKNWVKELQRQASPNIVIALAGNKADLANKRALDFQDAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
Y+ + ETSA + ++F+ ++K L ++ S+ R D +A P
Sbjct: 151 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQATGASTGRNRGVDLTETAQP 208
>gi|256271753|gb|EEU06790.1| Ypt6p [Saccharomyces cerevisiae JAY291]
Length = 215
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 112/189 (59%), Gaps = 9/189 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ R++ F H TIG F + + + + ++LQ+WDTAGQERFRS+ P Y
Sbjct: 20 GVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELK-RNVDEPLVLCVVGNKTDLESSREVNREEA 234
R++ A++V+DIT+ SF I W++++K DE ++LC+VGNK+DL R+++ EE
Sbjct: 80 IRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSDLSDERQISTEEG 139
Query: 235 FHYSKSIGGT-YYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
+K +G + ETS + ++ +F ++K L S DS+N SAN
Sbjct: 140 EKKAKLLGAKIFMETSTKEGYNVKALFKKIAKSL-----PEFQNSESTPLDSENANSANQ 194
Query: 294 R--GVVEIT 300
GV++I+
Sbjct: 195 NKPGVIDIS 203
>gi|550070|gb|AAA60245.1| GTP-binding protein [Homo sapiens]
Length = 215
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 95/152 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQE + S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQEGYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|367004961|ref|XP_003687213.1| hypothetical protein TPHA_0I02780 [Tetrapisispora phaffii CBS 4417]
gi|357525516|emb|CCE64779.1| hypothetical protein TPHA_0I02780 [Tetrapisispora phaffii CBS 4417]
Length = 208
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 112/182 (61%), Gaps = 9/182 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK--VKLQVWDTAGQERFRSMAP 173
VGK+S+V R++ F TIGA+F + I + EN +K ++WDTAGQER++S+AP
Sbjct: 13 SVGKSSIVYRFVKDSFDEFRESTIGAAFLSQTITLEENNQVIKFEIWDTAGQERYKSLAP 72
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNV-DEPLVLCVVGNKTDL----ESSRE 228
MYYRNANAAL+V+D+T S K+W++ELK+ V +E LV+C+VGNK D+ ++ R+
Sbjct: 73 MYYRNANAALVVYDVTAPDSLMKAKSWIEELKKKVGNEELVICLVGNKVDICEEDDTKRK 132
Query: 229 VNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNI 288
+ EEA ++ +YE SA +++VF + + L + ++ D+ NI
Sbjct: 133 IEFEEAKDWANDENLLFYEVSAKTGYNVKEVFQKIGEQL--YEYKKAEQANKGTQDNSNI 190
Query: 289 TS 290
TS
Sbjct: 191 TS 192
>gi|213403714|ref|XP_002172629.1| GTP-binding protein ypt5 [Schizosaccharomyces japonicus yFS275]
gi|212000676|gb|EEB06336.1| GTP-binding protein ypt5 [Schizosaccharomyces japonicus yFS275]
Length = 217
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 115/199 (57%), Gaps = 25/199 (12%)
Query: 111 NWFWLG---VGK--------TSMVVRYIGKMFSHHISPTIGASFFTAKINVG-ENKVKLQ 158
NWF G VGK +S+V+R++ F TIGA+F T + + E VK +
Sbjct: 14 NWFCWGDSAVGKVCLTGAVDSSLVLRFVKDQFDDFRESTIGAAFLTQTLPINDELAVKYE 73
Query: 159 VWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVG 218
+WDTAGQER++S+APMYYRNAN A++V+DITQ S K+W+KEL+R E +V+ + G
Sbjct: 74 IWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAG 133
Query: 219 NKTDL-ESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHT 277
NK DL + R V + +A Y+ +G ++ETSA + + ++F ++ L QE L
Sbjct: 134 NKLDLAQERRAVEKSDAESYANEMGLLFFETSAKTAENVTELFTAIANKLPL--QEQLTQ 191
Query: 278 SSLRVYDSDNITSANPRGV 296
+ +A+PRGV
Sbjct: 192 AK----------NASPRGV 200
>gi|242038603|ref|XP_002466696.1| hypothetical protein SORBIDRAFT_01g012480 [Sorghum bicolor]
gi|241920550|gb|EER93694.1| hypothetical protein SORBIDRAFT_01g012480 [Sorghum bicolor]
Length = 203
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 98/154 (63%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 20 VGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPM 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL+ + ++ + GNK D+ +R+V EEA
Sbjct: 80 YYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNPNTIVALAGNKADMLDARQVPAEEA 139
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++ G + ETSA + D+F ++K L+
Sbjct: 140 KTYAQENGLFFMETSAKSAINVNDIFYEIAKRLL 173
>gi|448535070|ref|XP_003870898.1| Ypt52 protein [Candida orthopsilosis Co 90-125]
gi|380355254|emb|CCG24771.1| Ypt52 protein [Candida orthopsilosis]
Length = 225
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 99/159 (62%), Gaps = 7/159 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK--VKLQVWDTAGQERFRSMAP 173
VGK+S+V R++ F TIGA+F T I + E++ +K ++WDTAGQER++S+AP
Sbjct: 25 AVGKSSIVHRFVKNTFDDARESTIGAAFLTQSITIPESQTTIKFEIWDTAGQERYKSLAP 84
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNAN+AL V+DIT +SF + W+KELK+ +V+ +VGNK DL+ +REV +E
Sbjct: 85 MYYRNANSALCVYDITSRNSFTKAQDWIKELKKQAPSEIVVALVGNKVDLDDNREVQSDE 144
Query: 234 AFHYSKSIGGTYY-----ETSALQDQGIEDVFLNVSKGL 267
Y + G + E SA G+ ++F + + L
Sbjct: 145 VDEYISELQGDGFKIIKAECSAKNGDGVVELFEAIGRAL 183
>gi|224054094|ref|XP_002191412.1| PREDICTED: ras-related protein Rab-17 [Taeniopygia guttata]
Length = 213
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 105/155 (67%), Gaps = 2/155 (1%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+ VGK+S+ RY+ F + PT+G SFFT +N+ E VK ++WDTAGQE+++S+ +
Sbjct: 28 MSVGKSSLAYRYVKSDF-RELLPTVGCSFFTQILNLEEATVKFEIWDTAGQEKYQSVCHL 86
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKEL-KRNVDEPLVLCVVGNKTDLESSREVNREE 233
YYR+A+AALLV+DI +F+ K W++EL K+ + + +V+ +VGNKTDL + REV EE
Sbjct: 87 YYRDAHAALLVYDIANKQTFSRAKLWLEELEKKFLPDEIVIALVGNKTDLAAEREVTTEE 146
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
++++ G + ETSA + + D+F+ + + L+
Sbjct: 147 GEDFARTKGLLFMETSAKSNHQVNDLFMAIVQELL 181
>gi|159477721|ref|XP_001696957.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158274869|gb|EDP00649.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 202
Score = 136 bits (342), Expect = 4e-29, Method: Composition-based stats.
Identities = 66/153 (43%), Positives = 98/153 (64%), Gaps = 2/153 (1%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+RY+ F + + T+GA+F T + E VK ++WDTAGQER+ S+APM
Sbjct: 22 MGSGKSSLVLRYVKGQFFDYQASTVGAAFLTKTLP--ELNVKFEIWDTAGQERYHSLAPM 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K+WV+EL+R + +++ + GNK DLE R V EEA
Sbjct: 80 YYRGAAAAIIVYDITSPDSFTRAKSWVRELQRQGNPNMIMALAGNKADLEGQRAVTVEEA 139
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G Y ETSA + ++F +++ L
Sbjct: 140 QAYAAENGLFYVETSAKTSANVNELFEEIARKL 172
>gi|355560060|gb|EHH16788.1| hypothetical protein EGK_12135 [Macaca mulatta]
Length = 215
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 95/152 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A A ++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 90 YRGAQAVIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + +TSA + ++F+ ++K L
Sbjct: 150 SYADDNSLLFMKTSAKTSMNVNEIFMAIAKKL 181
>gi|296878|emb|CAA50609.1| ras-related GTP-binding protein [Nicotiana tabacum]
Length = 200
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 96/153 (62%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+++R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+ PM
Sbjct: 19 VGAGKSSLLLRFVKGQFIEFQESTIGAAFFSQTVAVNDATVKFEIWDTAGQERYHSLPPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++VFDIT SF K WV+EL+ + +V+ + GNK DL +R+V EEA
Sbjct: 79 YYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMALAGNKADLLDARKVAAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + D+F ++ L
Sbjct: 139 QTYAQENGLFFMETSAKTASNVNDIFYEIANRL 171
>gi|45383121|ref|NP_989856.1| ras-related protein Rab-5C [Gallus gallus]
gi|326934183|ref|XP_003213173.1| PREDICTED: ras-related protein Rab-5C-like [Meleagris gallopavo]
gi|82246551|sp|Q98932.1|RAB5C_CHICK RecName: Full=Ras-related protein Rab-5C; AltName: Full=Rab5C-like
protein
gi|1531769|emb|CAA69142.1| rab5C-like protein [Gallus gallus]
gi|449267489|gb|EMC78432.1| Ras-related protein Rab-5C [Columba livia]
Length = 216
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F K WVKEL+R +V+ + GNK DL + R V+ ++A
Sbjct: 91 YRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADLATKRAVDFQDAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 TYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|242006074|ref|XP_002423881.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507127|gb|EEB11143.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 215
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 95/151 (62%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F TIGA+F T I + VK ++WDTAGQER+ S+APMYY
Sbjct: 32 VGKSSLVLRFVKGQFHEFQESTIGAAFLTQTICDDDLTVKFEIWDTAGQERYHSLAPMYY 91
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DI +F K+WVKEL+R+ +V+ + GNK DL R V +EA
Sbjct: 92 RGAQAAIVVYDIQNMDTFGKAKSWVKELQRHASPNIVIALAGNKADLSDKRMVETDEAQA 151
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + ++FL ++K L
Sbjct: 152 YAQDHGLLFMETSAKTAMNVNEIFLAIAKKL 182
>gi|390601081|gb|EIN10475.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 386
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 88/120 (73%), Gaps = 1/120 (0%)
Query: 116 GVGKTSMVVRYIGKMFS-HHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
GVGKTS++ RY+ F + + T GA F T KI+V +KV+LQ+WDTAGQERFRSMAPM
Sbjct: 27 GVGKTSLLHRYVQNKFDPKNTTATTGAFFVTKKIDVNGHKVRLQLWDTAGQERFRSMAPM 86
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR ANAAL+++DIT +F A++ W++ELK N L++ +VG+K DL SSR+V + A
Sbjct: 87 YYRGANAALILYDITNAPTFEAVRGWLEELKSNCSPELIIYIVGSKADLRSSRQVTEDFA 146
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 340 GVGKTSMVVRYIGKMFS-HHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS++ RY+ F + + T GA F T KI+V +KV+LQL
Sbjct: 27 GVGKTSLLHRYVQNKFDPKNTTATTGAFFVTKKIDVNGHKVRLQL 71
>gi|326436303|gb|EGD81873.1| RAB5C protein [Salpingoeca sp. ATCC 50818]
Length = 201
Score = 135 bits (341), Expect = 4e-29, Method: Composition-based stats.
Identities = 65/153 (42%), Positives = 98/153 (64%), Gaps = 1/153 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGE-NKVKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T + + + KVK ++WDTAGQER+ S+APM
Sbjct: 21 AVGKSSLVLRFVKGQFQEYQESTIGAAFLTQTVCLDDGTKVKFEIWDTAGQERYHSLAPM 80
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT + SF K+WVKEL++ + V+ + GNK DL + REV EE
Sbjct: 81 YYRGAQAAIVVYDITSHASFLRAKSWVKELQKQAENVAVIALAGNKADLAARREVQTEEV 140
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ + ETSA + ++F ++K L
Sbjct: 141 EAYAQEEKLLFMETSAKTAFNVVEIFAAIAKHL 173
>gi|168988599|pdb|2EFC|B Chain B, Ara7-GdpATVPS9A
gi|168988601|pdb|2EFC|D Chain D, Ara7-GdpATVPS9A
gi|168988603|pdb|2EFD|B Chain B, Ara7ATVPS9A
gi|168988605|pdb|2EFD|D Chain D, Ara7ATVPS9A
gi|168988607|pdb|2EFE|B Chain B, Ara7-Gdpnh2ATVPS9A
gi|168988609|pdb|2EFE|D Chain D, Ara7-Gdpnh2ATVPS9A
gi|168988611|pdb|2EFH|B Chain B, Ara7-GdpATVPS9A(D185N)
gi|168988613|pdb|2EFH|D Chain D, Ara7-GdpATVPS9A(D185N)
gi|453056092|pdb|4G01|B Chain B, Ara7-gdp-ca2+/vps9a
Length = 181
Score = 135 bits (341), Expect = 4e-29, Method: Composition-based stats.
Identities = 63/153 (41%), Positives = 100/153 (65%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 21 VGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 80
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++VFD+T SF K WV+EL+ + +V+ + GNK+DL +R+V E+A
Sbjct: 81 YYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDA 140
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA ++++F +++ L
Sbjct: 141 QTYAQENGLFFMETSAKTATNVKEIFYEIARRL 173
>gi|410904529|ref|XP_003965744.1| PREDICTED: ras-related protein Rab-5A-like [Takifugu rubripes]
Length = 216
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 104/178 (58%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SF K WVKEL+R +V+ + GNK DL + R ++ ++A
Sbjct: 91 YRGAQAAIVVYDITNEESFVRAKNWVKELQRQASPNIVIALAGNKADLANKRALDFQDAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
Y+ + ETSA + ++F+ ++K L ++ +S R D +A P
Sbjct: 151 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQAAGANSGRNRGVDLTETAQP 208
>gi|342319556|gb|EGU11504.1| GTP-binding protein RAB5 [Rhodotorula glutinis ATCC 204091]
Length = 211
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 99/152 (65%), Gaps = 3/152 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V++++ K F TIGA+F T + V +WDTAGQER++S+APMY
Sbjct: 25 AVGKSSIVLQFVKKQFDEWRESTIGAAFLTQTVPVKSGNF---IWDTAGQERYKSLAPMY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+A+AA++ FDIT SF ++W+ EL+R D +V+ + GNK DL S R+V+ +A
Sbjct: 82 YRSAHAAVVAFDITSSASFEKARSWIAELQRQADPGIVIVLAGNKLDLVSQRQVSTADAE 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++ G Y+E SA +GIE++F V++ +
Sbjct: 142 QFAREEGLLYFEVSAKTAEGIEEMFQTVAEKM 173
>gi|432910626|ref|XP_004078445.1| PREDICTED: ras-related protein Rab-5A-like [Oryzias latipes]
Length = 216
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 95/152 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SF K WVKEL+R +V+ + GNK DL + R ++ ++A
Sbjct: 91 YRGAQAAIVVYDITNEESFVRAKNWVKELQRQASPNIVIALAGNKADLANKRALDFQDAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 182
>gi|365758696|gb|EHN00526.1| Ypt53p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 220
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 98/158 (62%), Gaps = 6/158 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R+I F+ PTIGA+F T +I + +K ++WDTAGQERF +APMY
Sbjct: 22 AVGKSSIVLRFISNDFTESREPTIGAAFLTKRITRNDKAIKFEIWDTAGQERFAPLAPMY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLE------SSREV 229
YRNA AAL+VFDIT SF + WV+EL + + +++ +VGNK DL S+R V
Sbjct: 82 YRNAQAALVVFDITNEQSFRKAQNWVEELHEKLGDNIIIALVGNKMDLLTMQGEISNRAV 141
Query: 230 NREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
N +E + + Y+E SA + I++VF V + +
Sbjct: 142 NEDEIQNLCQQENLLYFEVSAKTGKNIQEVFQAVGEKI 179
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R+I F+ PTIGA+F T +I + +K ++
Sbjct: 22 AVGKSSIVLRFISNDFTESREPTIGAAFLTKRITRNDKAIKFEI 65
>gi|403369295|gb|EJY84490.1| hypothetical protein OXYTRI_17664 [Oxytricha trifallax]
Length = 221
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 99/153 (64%), Gaps = 1/153 (0%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+GVGKT + +RY FS TIG F T + ++ VK ++WDTAGQER+ S+A M
Sbjct: 39 MGVGKTCISIRYAYGKFSSTHEATIGGCFLTKDEELDDHIVKYEIWDTAGQERYHSLAQM 98
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YY+NA AA +VFD+T SF + WV+EL + +++ ++GNK DL+ S ++ RE+A
Sbjct: 99 YYKNAIAACVVFDVTSKESFEKCQKWVEELNQKAQADIIITIIGNKIDLD-SHQITREQA 157
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y K +G YYE SA Q+QG++ VF +++K L
Sbjct: 158 EAYCKQMGLQYYEVSAKQNQGVDKVFKDIAKRL 190
>gi|118375516|ref|XP_001020942.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|89302709|gb|EAS00697.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777796|dbj|BAJ21294.1| Rab-family small GTPase Rab5B [Tetrahymena thermophila]
Length = 197
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 97/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ R+ K F + T+GASF + G+ K Q+WDTAGQE++RS+AP+Y
Sbjct: 16 GVGKTSILNRFSNKGFDENSQTTLGASFIPKVLTRGDKTYKFQIWDTAGQEKYRSLAPLY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ +AAL+V+DIT SF +K WV+EL+ + + + VVGNK DL +V +EA
Sbjct: 76 YRDTHAALIVYDITNRASFDVLKKWVQELREHGPANITIAVVGNKVDLIDREDVKYDEAK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ + + TSA ++Q IE +F+ +++
Sbjct: 136 QYANELNAIFQYTSAKENQNIESLFIQIAE 165
>gi|336271401|ref|XP_003350459.1| hypothetical protein SMAC_02172 [Sordaria macrospora k-hell]
gi|380090981|emb|CCC11514.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 236
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 101/173 (58%), Gaps = 21/173 (12%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++WDTAGQERF S+APMY
Sbjct: 22 AVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLES---------- 225
YRNA AAL+V+D+T+ S K WV EL+R +V+ +VGNK DL S
Sbjct: 82 YRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTSDSAGTAEVSG 141
Query: 226 -----------SREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+R+++ EEA Y++ G ++ETSA + +VF ++ +
Sbjct: 142 DGDDNAEDSGDARKISTEEAKTYAEEEGLLFFETSAKTGHNVTEVFTAIANAI 194
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++
Sbjct: 22 AVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEI 65
>gi|260949137|ref|XP_002618865.1| hypothetical protein CLUG_00024 [Clavispora lusitaniae ATCC 42720]
gi|238846437|gb|EEQ35901.1| hypothetical protein CLUG_00024 [Clavispora lusitaniae ATCC 42720]
Length = 221
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 99/164 (60%), Gaps = 12/164 (7%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGE--NKVKLQVWDTAGQERFRSMAP 173
VGK+S+V R++ F TIGA+F T IN+ E VK ++WDTAGQER++S+AP
Sbjct: 27 AVGKSSIVHRFVKNTFDDMRESTIGAAFLTQTINLPEANTTVKFEIWDTAGQERYKSLAP 86
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYRNANAAL V+DIT SF + W++ELK+ E +V+ +VGNK DL REV+ E
Sbjct: 87 MYYRNANAALCVYDITSRSSFNKAQDWIEELKKQAPEGIVVALVGNKADLSHEREVDESE 146
Query: 234 AFHY-------SKSIGG---TYYETSALQDQGIEDVFLNVSKGL 267
Y S + GG + E SA G+ +VF +++ L
Sbjct: 147 IVEYIERLKQESAAEGGREIIHMECSAKSGDGVLEVFDAIARAL 190
>gi|317419436|emb|CBN81473.1| Ras-related protein Rab-5C [Dicentrarchus labrax]
Length = 221
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 95/151 (62%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMYY
Sbjct: 33 VGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYY 92
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +FA K WVKEL+R +V+ + GNK D+ + R V +EA
Sbjct: 93 RGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADIANKRAVELQEAQT 152
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 153 YADDNSLLFMETSAKTAMNVNEIFMAIAKKL 183
>gi|350537173|ref|NP_001232748.1| putative RAB5C member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197128640|gb|ACH45138.1| putative RAB5C member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 216
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 96/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F K WVKEL+R +V+ + GNK DL + R V+ ++A
Sbjct: 91 YRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADLANKRAVDFQDAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F+ ++K L
Sbjct: 151 TYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|9988838|gb|AAG10794.1|AF296447_1 Rab5 [Toxoplasma gondii]
Length = 240
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+ +VVR+ F + TIGA+F T +N+G VK ++WDTAGQER+RS+APMYY
Sbjct: 55 VGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVNLGSCIVKFEIWDTAGQERYRSLAPMYY 114
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREEAF 235
R A AA++V+DI+ SF K+WV+EL+ D +V+ + GNK DL + R+V ++EA
Sbjct: 115 RGAAAAVVVYDISNRDSFQGAKSWVQELQSVNDRSNVVIALAGNKEDLAAERQVPKQEAQ 174
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G + ETSA + ++F ++ L
Sbjct: 175 QYADEHGILFLETSAKTGHNVNELFYEIAAAL 206
>gi|50557054|ref|XP_505935.1| YALI0F27181p [Yarrowia lipolytica]
gi|49651805|emb|CAG78747.1| YALI0F27181p [Yarrowia lipolytica CLIB122]
Length = 207
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 102/150 (68%), Gaps = 1/150 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMY 175
VGK+S+V R++ F TIGA+F T +++ +NK V+ ++WDTAGQER++S+APMY
Sbjct: 25 VGKSSLVTRFVKDEFLEQRESTIGAAFLTQTVSLEDNKTVRFEIWDTAGQERYKSLAPMY 84
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNAN A++V+DITQ S K WVKEL+ + +++ + GNK DLE REV EEA
Sbjct: 85 YRNANCAVVVYDITQASSLERSKAWVKELQHRAADGIIIGLAGNKLDLEDKREVPTEEAR 144
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++ G ++ETSAL + + ++F +++
Sbjct: 145 AYAEEAGLLFFETSALTGENVLELFTEIAR 174
>gi|346319675|gb|EGX89276.1| Rab5-like protein ypt51 [Cordyceps militaris CM01]
Length = 233
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 99/168 (58%), Gaps = 16/168 (9%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++WDTAGQERF S+APMY
Sbjct: 23 AVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLES---------- 225
YRNA AAL+V+DIT+ S K WV EL+R +V+ +VGNK DL S
Sbjct: 83 YRNAQAALVVYDITKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLASESAGGDNGDD 142
Query: 226 ------SREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+R+V EEA Y++ ++ETSA + +VF ++ +
Sbjct: 143 GDDSGDARKVPTEEAKTYAEDESLLFFETSAKTGVNVTEVFTAIANAI 190
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++
Sbjct: 23 AVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEI 66
>gi|118348924|ref|XP_001007935.1| Ras family protein [Tetrahymena thermophila]
gi|89289702|gb|EAR87690.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777792|dbj|BAJ21292.1| Rab-family small GTPase Rab21B [Tetrahymena thermophila]
Length = 207
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 104/154 (67%), Gaps = 2/154 (1%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGE-NKVKLQVWDTAGQERFRSMAPMY 175
VGKTS+ +RY +S TI S+ + V E +KV + +WDTAGQE+F+S+ PMY
Sbjct: 17 VGKTSLTLRYCKGEYSDTQESTINVSYLEKTVQVNETDKVNIAIWDTAGQEKFKSITPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVD-EPLVLCVVGNKTDLESSREVNREEA 234
Y+ A A++V+DIT SF +K+WV EL + +D +V+C+ GNK DLE++R+++++ A
Sbjct: 77 YQQAVCAIIVYDITYKESFDKVKSWVTELTQILDTNKIVICIAGNKCDLENNRQIDKQFA 136
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y+KS+G ++ TSA ++GI+++F V + ++
Sbjct: 137 EDYAKSVGARHFLTSAKNNRGIDELFQYVGQEIL 170
>gi|237839103|ref|XP_002368849.1| Rab 5 [Toxoplasma gondii ME49]
gi|211966513|gb|EEB01709.1| Rab 5 [Toxoplasma gondii ME49]
Length = 241
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+ +VVR+ F + TIGA+F T +N+G VK ++WDTAGQER+RS+APMYY
Sbjct: 55 VGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVNLGSCIVKFEIWDTAGQERYRSLAPMYY 114
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREEAF 235
R A AA++V+DI+ SF K+WV+EL+ D +V+ + GNK DL + R+V ++EA
Sbjct: 115 RGAAAAVVVYDISNRDSFQGAKSWVQELQSVNDRSNVVIALAGNKEDLAAERQVPKQEAQ 174
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G + ETSA + ++F ++ L
Sbjct: 175 QYADEHGILFLETSAKTGHNVNELFYEIAAAL 206
>gi|55670041|pdb|1TU4|A Chain A, Crystal Structure Of Rab5-Gdp Complex
gi|55670042|pdb|1TU4|B Chain B, Crystal Structure Of Rab5-Gdp Complex
gi|55670043|pdb|1TU4|C Chain C, Crystal Structure Of Rab5-Gdp Complex
gi|55670044|pdb|1TU4|D Chain D, Crystal Structure Of Rab5-Gdp Complex
Length = 171
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 94/152 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+AP Y
Sbjct: 17 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPXY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL + R V+ +EA
Sbjct: 77 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ + ETSA + ++F ++K L
Sbjct: 137 SYADDNSLLFXETSAKTSXNVNEIFXAIAKKL 168
>gi|154312633|ref|XP_001555644.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 237
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 107/173 (61%), Gaps = 21/173 (12%)
Query: 116 GVGKTSMVVRYIG---------KMFSHHIS-------PTIGASFFTAKINVGENK-VKLQ 158
VGK+S+V+R++ +M H + TIGA+F T I++ EN VK +
Sbjct: 28 AVGKSSLVLRFVKPGYDSNREFRMNKDHTADHTTDRESTIGAAFLTQTISLDENTTVKFE 87
Query: 159 VWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVG 218
+WDTAGQER++S+APMYYRNAN A++V+DITQ S K+WVKEL+R +E +++ + G
Sbjct: 88 IWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAG 147
Query: 219 NKTDL----ESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
NK DL R + E+A +Y+K G ++ETSA + + ++F ++K L
Sbjct: 148 NKLDLVTEQPDKRAITTEDASNYAKEAGLLFFETSAKTSENVRELFTAIAKKL 200
>gi|125580167|gb|EAZ21313.1| hypothetical protein OsJ_36965 [Oryza sativa Japonica Group]
gi|218187297|gb|EEC69724.1| hypothetical protein OsI_39224 [Oryza sativa Indica Group]
Length = 198
Score = 135 bits (340), Expect = 7e-29, Method: Composition-based stats.
Identities = 65/154 (42%), Positives = 98/154 (63%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 20 VGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPM 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL+ + ++ + GNK D+ +R+V EEA
Sbjct: 80 YYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMVEARQVPAEEA 139
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++ G + ETSA + DVF ++K L+
Sbjct: 140 KTYAQENGLFFMETSAKTAINVNDVFHEIAKRLL 173
>gi|71024641|ref|XP_762550.1| hypothetical protein UM06403.1 [Ustilago maydis 521]
gi|46102027|gb|EAK87260.1| hypothetical protein UM06403.1 [Ustilago maydis 521]
Length = 700
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 88/121 (72%), Gaps = 2/121 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISP-TIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
GVGKTS+V RY FS +P TIGASF T K+ V KV+LQ+WDTAGQERFRSMAPM
Sbjct: 389 GVGKTSLVHRYTSGQFSIASTPSTIGASFLTKKLIVDGVKVRLQLWDTAGQERFRSMAPM 448
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL-ESSREVNREE 233
YYR ++AA++V+DIT SF I+TW++ELK+N+ LV+ +VG K DL S R+V E
Sbjct: 449 YYRGSHAAVIVYDITSMSSFMDIRTWIEELKKNMTTDLVIHIVGAKLDLARSQRQVELEF 508
Query: 234 A 234
A
Sbjct: 509 A 509
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 340 GVGKTSMVVRYIGKMFSHHISP-TIGASFFTAKINVGENKVKLQL 383
GVGKTS+V RY FS +P TIGASF T K+ V KV+LQL
Sbjct: 389 GVGKTSLVHRYTSGQFSIASTPSTIGASFLTKKLIVDGVKVRLQL 433
>gi|13774086|gb|AAK38149.1| small GTP-binding protein [Oryza sativa]
Length = 203
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 97/154 (62%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ +APM
Sbjct: 20 VGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHGLAPM 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL+ + ++ + GNK D+ +R+V EEA
Sbjct: 80 YYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMVEARQVPAEEA 139
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++ G + ETSA + DVF ++K L+
Sbjct: 140 KTYAQENGLFFMETSAKTAINVNDVFHEIAKRLL 173
>gi|167384417|ref|XP_001736944.1| rab11 [Entamoeba dispar SAW760]
gi|165900524|gb|EDR26832.1| rab11, putative [Entamoeba dispar SAW760]
Length = 213
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 100/166 (60%), Gaps = 1/166 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+++++R+ F TIG F + +I + V+ Q+WDTAGQER+R++ Y
Sbjct: 19 GVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIWDTAGQERYRAITNAY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A A+LV+D+T+ SF ++ W+ EL+ N D+ +V +VGNK DLE REV +E
Sbjct: 79 YRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVGNKCDLEQMREVTIKEGE 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLR 281
+K IG ++ETSAL + +E F+ + + IC Q L S +
Sbjct: 139 DMAKKIGAFFFETSALDGKNVETAFMAIIQK-ICDEQTRLRASETK 183
>gi|255936341|ref|XP_002559197.1| Pc13g07680 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583817|emb|CAP91837.1| Pc13g07680 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 220
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
+ ++S+V+R++ F + TIGA+F T I++ + VK ++WDTAGQER++S+APM
Sbjct: 29 AIFQSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDDTTTVKFEIWDTAGQERYKSLAPM 88
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL--ES--SREVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +V+ + GNK DL ES R +
Sbjct: 89 YYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTESPDKRAIQ 148
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y++ G ++ETSA ++++F ++K L
Sbjct: 149 EADAEAYAREAGLLFFETSAKSSTNVKELFTAIAKKL 185
>gi|403293753|ref|XP_003937876.1| PREDICTED: ras-related protein Rab-25 [Saimiri boliviensis
boliviensis]
Length = 213
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 97/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++H++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHHTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>gi|281206811|gb|EFA80995.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 219
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 101/165 (61%), Gaps = 3/165 (1%)
Query: 106 NCFEANWFWLG---VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDT 162
N F+ N LG VGK+S+V+R++ F + TIGA+F + + + VK ++WDT
Sbjct: 24 NSFKDNLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEIWDT 83
Query: 163 AGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTD 222
AGQER+ ++APMYYR A AA++V+DI SF WVKEL+R +V+ + GNK D
Sbjct: 84 AGQERYHTLAPMYYRGAQAAIVVYDIRSQDSFERAIKWVKELQRQGSPNIVIALAGNKLD 143
Query: 223 LESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
L + R+V EA Y++ G + ETSA Q + ++F+ ++K L
Sbjct: 144 LAAKRKVETSEAQTYAEENGLLFMETSAKTAQNVNELFVEIAKKL 188
>gi|325188239|emb|CCA22779.1| Rab21/Rab5 family GTPase putative [Albugo laibachii Nc14]
Length = 222
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 108/178 (60%), Gaps = 10/178 (5%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-----KVKLQVWDTAGQERFRSM 171
VGKTS+ +RY + S TIGASF ++ V K+ LQ+WDTAGQERFRSM
Sbjct: 18 VGKTSITMRYCHGSLTTPTSATIGASFLQKRVIVPSRSGKPRKITLQIWDTAGQERFRSM 77
Query: 172 APMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNR 231
APMYYRNA AA+LVFD+ +F I W+++L+ +V +VL VVGNK+D S + ++
Sbjct: 78 APMYYRNAKAAILVFDLQHEITFEKIIEWLQDLRHHVSSDIVLAVVGNKSDCASQFDFSK 137
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNIT 289
+AF ++ IG + TSA +GI+ +F +V+ L+ ++ + LR D N T
Sbjct: 138 AQAF--AQEIGALVFRTSAKTGEGIQFLFESVAAELLKQYEDKMR---LREADGANTT 190
>gi|340516399|gb|EGR46648.1| rab5-like GTPase [Trichoderma reesei QM6a]
Length = 229
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 108/199 (54%), Gaps = 21/199 (10%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++WDTAGQERF S+APMYY
Sbjct: 21 VGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYY 80
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLES----------- 225
RNA AAL+V+DIT+ S + WV EL+R +V+ +VGNK DL
Sbjct: 81 RNAQAALVVYDITKPTSLVKARHWVAELQRQASPGIVIALVGNKLDLAGESQGASEEAEG 140
Query: 226 -----SREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSL 280
+R+V+ EEA Y++ ++ETSA + +VF ++ + S +S
Sbjct: 141 EDGGDARKVSTEEAQSYAEEESLLFFETSAKTGHNVTEVFTAIANAIPETSLKSARGPGA 200
Query: 281 -----RVYDSDNITSANPR 294
R D + + PR
Sbjct: 201 AGNANRAGDEQRVNLSGPR 219
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++
Sbjct: 21 VGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEI 63
>gi|426201327|gb|EKV51250.1| GTP-binding protein RAB5 [Agaricus bisporus var. bisporus H97]
Length = 207
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 116/189 (61%), Gaps = 13/189 (6%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER++ APM
Sbjct: 16 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDQTTVKFEIWDTAGQERYK--APM 73
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYRNAN A++V+DITQ S +TW++EL+R D +V+ + GNK+DL++ R+V +EEA
Sbjct: 74 YYRNANCAVVVYDITQSSSLEKARTWIRELQRQADPNIVITLCGNKSDLDARRQVTQEEA 133
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHT--------SSLRVYDSD 286
Y++ G + ETSA +G+ +VF ++K L + S + + + D D
Sbjct: 134 KKYAEEEGLMWAETSAKSGEGVTEVFTAIAKKLPLTASPSARSGAGSRTGPGARQGVDLD 193
Query: 287 NITSANPRG 295
ANPRG
Sbjct: 194 R--QANPRG 200
>gi|425765692|gb|EKV04360.1| RAB GTPase Ypt5, putative [Penicillium digitatum Pd1]
gi|425779183|gb|EKV17266.1| RAB GTPase Ypt5, putative [Penicillium digitatum PHI26]
Length = 242
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 102/154 (66%), Gaps = 5/154 (3%)
Query: 119 KTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMYYR 177
++S+V+R++ F + TIGA+F T I++ + VK ++WDTAGQER++S+APMYYR
Sbjct: 50 QSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDDTTTVKFEIWDTAGQERYKSLAPMYYR 109
Query: 178 NANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL--ES--SREVNREE 233
NAN A++V+DITQ S K+WVKEL+R +E +V+ + GNK DL ES R + +
Sbjct: 110 NANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTESPDKRAIQEAD 169
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
A Y++ G ++ETSA ++++F ++K L
Sbjct: 170 AEAYAREAGLLFFETSAKSSTNVKELFTAIAKKL 203
>gi|6323291|ref|NP_013363.1| Ypt6p [Saccharomyces cerevisiae S288c]
gi|2500077|sp|Q99260.1|YPT6_YEAST RecName: Full=GTP-binding protein YPT6
gi|577182|gb|AAB67381.1| Ylr262cp [Saccharomyces cerevisiae]
gi|927545|emb|CAA42166.1| Ypt6p [Saccharomyces cerevisiae]
gi|45269764|gb|AAS56262.1| YLR262C [Saccharomyces cerevisiae]
gi|151941095|gb|EDN59475.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190405321|gb|EDV08588.1| GTP-binding protein YPT6 [Saccharomyces cerevisiae RM11-1a]
gi|207342890|gb|EDZ70519.1| YLR262Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148244|emb|CAY81491.1| Ypt6p [Saccharomyces cerevisiae EC1118]
gi|285813678|tpg|DAA09574.1| TPA: Ypt6p [Saccharomyces cerevisiae S288c]
gi|392297767|gb|EIW08866.1| Ypt6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 215
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 111/189 (58%), Gaps = 9/189 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ R++ F H TIG F + + + + ++LQ+WDTAGQERFRS+ P Y
Sbjct: 20 GVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELK-RNVDEPLVLCVVGNKTDLESSREVNREEA 234
R++ A++V+DIT+ SF I W++++K DE ++LC+VGNK+DL R+++ EE
Sbjct: 80 IRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSDLSDERQISTEEG 139
Query: 235 FHYSKSIGGT-YYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
+K +G + ETS ++ +F ++K L S DS+N SAN
Sbjct: 140 EKKAKLLGAKIFMETSTKAGYNVKALFKKIAKSL-----PEFQNSESTPLDSENANSANQ 194
Query: 294 R--GVVEIT 300
GV++I+
Sbjct: 195 NKPGVIDIS 203
>gi|193606029|ref|XP_001944241.1| PREDICTED: ras-related protein Rab-5C-like [Acyrthosiphon pisum]
Length = 211
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 96/151 (63%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + TIGA+F T I++ + VK ++WDTAGQER+ S+APMYY
Sbjct: 31 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTIHLNDVAVKFEIWDTAGQERYHSLAPMYY 90
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R A AA++V+DIT +F K WVKEL+R +V+ + GNK DL + R V +E+
Sbjct: 91 RGAQAAIVVYDITNQDTFERAKNWVKELQRQATPGIVIALAGNKLDLNTMRSVQTDESQT 150
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G + ETSA + ++F +++ L
Sbjct: 151 YAYENGLLFMETSAKTSANVTEIFKAIAEKL 181
>gi|156382558|ref|XP_001632620.1| predicted protein [Nematostella vectensis]
gi|156219678|gb|EDO40557.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 99/152 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +V R++ +F+ PTIGA+F T + V + K +WDTAGQERF+S+AP+Y
Sbjct: 22 GVGKSCLVHRFVSDIFNASSPPTIGAAFMTKMMIVNDKAYKFNIWDTAGQERFKSLAPLY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+A AA+LV+DIT +F +++ W++EL+R + +V+ V GNK D R+V ++A
Sbjct: 82 YRDAAAAILVYDITIESTFHSLRPWIRELQRYGPQDIVIAVAGNKCDKADQRDVQVQDAQ 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
++ S+ + ETSAL + + +F + K L
Sbjct: 142 DFAGSVDAIFAETSALTSKNVHWLFEELCKKL 173
>gi|336275989|ref|XP_003352748.1| hypothetical protein SMAC_01582 [Sordaria macrospora k-hell]
gi|380094637|emb|CCC08018.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 220
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 104/157 (66%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 29 AVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 88
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +++ + GNK DL R +
Sbjct: 89 YYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLDLVQEQPDKRAIQ 148
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+A Y+K G ++ETSA + ++++F ++K L
Sbjct: 149 TADAAAYAKEAGLLFFETSAKTAENVQNLFTEIAKKL 185
>gi|123471026|ref|XP_001318715.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121901481|gb|EAY06492.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 200
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 89/145 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+ +YI + PTIGA+F T I V V+L +WDTAGQE +R +APMY
Sbjct: 17 GVGKTSIATQYISGKAPQSVKPTIGAAFVTKSIVVDGQPVELLIWDTAGQEVYRGLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+A A++VFDIT+ S+ ++ W+ ELK N D ++ V NKTDLE R V A
Sbjct: 77 YRSALIAIVVFDITRQQSYDSVSYWINELKANADSRTIIVVCANKTDLEDQRAVVEVTAQ 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVF 260
+++S G Y TSA GI+ +F
Sbjct: 137 EFAESHGALYAATSATTGSGIDRMF 161
>gi|348508689|ref|XP_003441886.1| PREDICTED: ras-related protein Rab-5C-like [Oreochromis niloticus]
Length = 222
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 102/180 (56%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 33 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 92
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F K WVKEL+R +V+ + GNK D+ + R V +EA
Sbjct: 93 YRGAQAAIVVYDITNTDTFDRAKNWVKELQRQASPNIVIALAGNKADIANKRAVEFQEAQ 152
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPRG 295
Y+ + ETSA + ++F+ ++K L + R ++ NP+G
Sbjct: 153 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKSEPQGTAGQGGRTRTGVDLEQTNPQG 212
>gi|116007254|ref|NP_001036322.1| Rab21, isoform A [Drosophila melanogaster]
gi|30923579|gb|EAA46056.1| Rab21, isoform A [Drosophila melanogaster]
Length = 189
Score = 135 bits (339), Expect = 1e-28, Method: Composition-based stats.
Identities = 66/165 (40%), Positives = 112/165 (67%), Gaps = 5/165 (3%)
Query: 132 SHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMYYRNANAALLVFDITQ 190
+ H+S T+ ASF + K+++ + + +L +WDTAGQERF ++ P+YYR ++ ALLV+DIT
Sbjct: 7 AQHLS-TLQASFVSRKMSLEDGRRAQLNIWDTAGQERFHALGPIYYRGSDGALLVYDITD 65
Query: 191 YHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFHYSKSIGGTYYETSA 250
SF +K+WV+EL++ + L +VGNKTDLE R V +EA Y++++G Y ETSA
Sbjct: 66 RDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTHDEALQYARTVGAQYVETSA 125
Query: 251 LQDQGIEDVFLNVSKGLI-CLSQESLHTSSLRVY--DSDNITSAN 292
+++G+ ++F +++ ++ LSQ S LR+ D+DN+ +++
Sbjct: 126 KENEGVAELFELLTQLMLEQLSQRQPDASPLRLQNPDTDNLNNSD 170
>gi|354548461|emb|CCE45197.1| hypothetical protein CPAR2_702090 [Candida parapsilosis]
Length = 228
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 100/171 (58%), Gaps = 19/171 (11%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K +G+ +K ++WDTAGQERF S+APMY
Sbjct: 21 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDRTIKYEIWDTAGQERFASLAPMY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL------------ 223
YRNA AA++V+DIT+ SF + WVKEL + + + +VGNK DL
Sbjct: 81 YRNAQAAIVVYDITKPASFVKARHWVKELHEQASKDITIALVGNKYDLVEDEPEDGGNVG 140
Query: 224 -------ESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
ES R+V++EE + G ++E SA + +VF+ + + +
Sbjct: 141 EGEGGTSESLRKVSKEEGQALADEEGLLFFEASAKTSYNVNEVFVGIGEKI 191
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K +G+ +K ++
Sbjct: 21 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDRTIKYEI 64
>gi|341881170|gb|EGT37105.1| hypothetical protein CAEBREN_13223 [Caenorhabditis brenneri]
Length = 210
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 107/176 (60%), Gaps = 5/176 (2%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ FS TI ASF + I++ + K +L +WDTAGQE++ ++ P+YY
Sbjct: 23 VGKSSLVLRFVENKFSSRHLSTIQASFVSKTIHIDDCKAELHIWDTAGQEKYHALGPIYY 82
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R +N LLVFDIT SF +K WV E+K + + + +VGNKTDLE R ++R++A
Sbjct: 83 RGSNGVLLVFDITDRRSFERVKNWVLEIKTCLGKTAEILIVGNKTDLEDERLISRQDAEV 142
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI-----CLSQESLHTSSLRVYDSDN 287
Y+ S Y ETSA + GI + F ++ +I ++ + S+R+ D D+
Sbjct: 143 YADSENALYMETSAQDNIGIPEAFEALTAKMIEHARTAPTESPISNRSIRLIDDDD 198
>gi|402221866|gb|EJU01934.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 260
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 106/193 (54%), Gaps = 43/193 (22%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ FS + PTIGA+F T K + + ++ ++WDTAGQERF S+APMY
Sbjct: 24 AVGKSSVVMRFVQNDFSENKEPTIGAAFLTQKCRLEDRVLRYEIWDTAGQERFHSLAPMY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL------------ 223
YRNA AA++V+DIT+ S K+WVKEL+R + +V+ +VGNK DL
Sbjct: 84 YRNAQAAVVVYDITKASSLEKAKSWVKELQRQANPNIVIALVGNKLDLVQSPAAAGAAPA 143
Query: 224 -------------------------------ESSREVNREEAFHYSKSIGGTYYETSALQ 252
ES R+V ++EA Y++ G + ETSA
Sbjct: 144 GEEAEDEEADDATATPGEGGEQPLPEPEQEGESLRQVPKDEAAAYAQEAGLLFAETSAKT 203
Query: 253 DQGIEDVFLNVSK 265
+G+ +VF ++K
Sbjct: 204 GEGVVEVFTEIAK 216
>gi|62736284|gb|AAX97471.1| small Rab GTPase RabD1 [Trichomonas vaginalis]
Length = 200
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 89/145 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+ +YI + PTIGA+F T I V V+L +WDTAGQE +R +APMY
Sbjct: 17 GVGKTSIATQYISGKAPQSVKPTIGAAFVTKSIVVDGQPVELLIWDTAGQEVYRGLAPMY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+A A++VFDIT+ S+ ++ W+ ELK N D ++ V NKTDLE R V A
Sbjct: 77 YRSALIAIVVFDITRQQSYDSVSYWINELKANADSRTIIVVCANKTDLEDQRAVVEVTAQ 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVF 260
+++S G Y TSA GI+ +F
Sbjct: 137 EFAESHGALYAATSATTGSGIDRMF 161
>gi|56756264|gb|AAW26307.1| SJCHGC09085 protein [Schistosoma japonicum]
Length = 199
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 97/154 (62%), Gaps = 2/154 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGE--NKVKLQVWDTAGQERFRSMAP 173
VGK+S+V+R FS + TIGA+F T + + + VKL++WDTAGQER+ S+AP
Sbjct: 17 AVGKSSIVIRLCKSQFSEYQEATIGAAFMTHMVVLEDPPTTVKLEIWDTAGQERYHSLAP 76
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYR A AA++V+D+T SF K+WV EL +N + V+ + GNK DLE+ R V+ EE
Sbjct: 77 MYYRGAQAAVVVYDVTNKDSFVRAKSWVNELNKNANTAKVIALAGNKVDLEAQRVVSHEE 136
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
A Y+ G + ETSA + ++F +++ L
Sbjct: 137 AQEYANQNGLLFMETSAKTATNVPELFTAIAQRL 170
>gi|47218775|emb|CAG02761.1| unnamed protein product [Tetraodon nigroviridis]
Length = 228
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 94/154 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT SF K WVKEL+R +V+ + GNK DL + R ++ ++A
Sbjct: 91 YRGAQAAIVVYDITNEESFVRAKNWVKELQRQASPNIVIALAGNKADLANKRALDFQDAQ 150
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLIC 269
Y+ + ETSA + ++F+ + K C
Sbjct: 151 SYADDNSLLFMETSAKTSMNVNEIFMAIGKIAHC 184
>gi|400601582|gb|EJP69225.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 232
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 99/168 (58%), Gaps = 16/168 (9%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++WDTAGQERF S+APMY
Sbjct: 23 AVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLES---------- 225
YRNA AAL+V+DIT+ S K WV EL+R +V+ +VGNK DL S
Sbjct: 83 YRNAQAALVVYDITKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLASESASGDNGDD 142
Query: 226 ------SREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+R+V +EA Y++ ++ETSA + +VF ++ +
Sbjct: 143 GDDSGDARKVPTDEAKAYAEEESLLFFETSAKTGVNVSEVFTAIANAI 190
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++
Sbjct: 23 AVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEI 66
>gi|392579448|gb|EIW72575.1| hypothetical protein TREMEDRAFT_66953 [Tremella mesenterica DSM
1558]
Length = 246
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 103/186 (55%), Gaps = 34/186 (18%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F+ + SPTIGA+F T + + VK ++WDTAGQERF S+APMY
Sbjct: 21 AVGKSSLVLRFVQNDFNENTSPTIGAAFLTQRCRLENRIVKFEIWDTAGQERFHSLAPMY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLES---------- 225
YRNA AA++V+DIT+ S K WVKEL+R + +++ +VGNK DL S
Sbjct: 81 YRNAAAAVVVYDITKSASLEKAKAWVKELQRQANPNIIIALVGNKLDLVSDTPSEPPTDG 140
Query: 226 ------------------------SREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFL 261
SR+V+ EA Y+K G ++E SA + +VF
Sbjct: 141 LEVERDEEDEETTPKPAEKTEEGDSRQVSIAEAETYAKECGLLFFEASAKVGTNVNEVFT 200
Query: 262 NVSKGL 267
++K +
Sbjct: 201 EIAKAI 206
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F+ + SPTIGA+F T + + VK ++
Sbjct: 21 AVGKSSLVLRFVQNDFNENTSPTIGAAFLTQRCRLENRIVKFEI 64
>gi|336469296|gb|EGO57458.1| hypothetical protein NEUTE1DRAFT_146066 [Neurospora tetrasperma
FGSC 2508]
gi|350291070|gb|EGZ72284.1| Rab5-like protein ypt51 [Neurospora tetrasperma FGSC 2509]
Length = 236
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 101/172 (58%), Gaps = 21/172 (12%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++WDTAGQERF S+APMYY
Sbjct: 23 VGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYY 82
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLES----------- 225
RNA AAL+V+D+T+ S K WV EL+R +V+ +VGNK DL S
Sbjct: 83 RNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTSDSAGSAEVSGG 142
Query: 226 ----------SREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+R+++ +EA Y++ G ++ETSA + +VF ++ +
Sbjct: 143 GDDNAEDSGDARKISTDEAKAYAEEEGLLFFETSAKTGHNVTEVFTAIANAI 194
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++
Sbjct: 23 VGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEI 65
>gi|85076611|ref|XP_955952.1| Rab5-like protein ypt51 [Neurospora crassa OR74A]
gi|28916987|gb|EAA26716.1| Rab5-like protein ypt51 [Neurospora crassa OR74A]
Length = 236
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 101/172 (58%), Gaps = 21/172 (12%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++WDTAGQERF S+APMYY
Sbjct: 23 VGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYY 82
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLES----------- 225
RNA AAL+V+D+T+ S K WV EL+R +V+ +VGNK DL S
Sbjct: 83 RNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTSDSAGSAEASGG 142
Query: 226 ----------SREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+R+++ +EA Y++ G ++ETSA + +VF ++ +
Sbjct: 143 GDDNAEDSGDARKISTDEAKAYAEEEGLLFFETSAKTGHNVTEVFTAIANAI 194
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++
Sbjct: 23 VGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEI 65
>gi|401837860|gb|EJT41716.1| YPT53-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 220
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 97/158 (61%), Gaps = 6/158 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R+I F+ PTIGA+F T +I + +K ++WDTAGQERF +APMY
Sbjct: 22 AVGKSSIVLRFISNDFTESREPTIGAAFLTKRITRDDKAIKFEIWDTAGQERFAPLAPMY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLE------SSREV 229
YRNA AAL+VFDIT SF + WV+EL + + +++ +VGNK DL S+R V
Sbjct: 82 YRNAQAALVVFDITNEQSFRKAQDWVEELHEKLGDNIIIALVGNKMDLLTMQGEISNRAV 141
Query: 230 NREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
N +E + + Y+E SA + I +VF V + +
Sbjct: 142 NEDEIQNLCQQENLLYFEVSAKTGKNIHEVFQAVGEKI 179
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R+I F+ PTIGA+F T +I + +K ++
Sbjct: 22 AVGKSSIVLRFISNDFTESREPTIGAAFLTKRITRDDKAIKFEI 65
>gi|310790093|gb|EFQ25626.1| Ras family protein [Glomerella graminicola M1.001]
Length = 221
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 105/157 (66%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 30 AVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 89
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL R V+
Sbjct: 90 YYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVTEQPDKRAVS 149
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
EEA Y++ G ++ETSA + ++++F ++K L
Sbjct: 150 TEEAEAYAREAGLLFFETSAKTAENVKELFTAIAKKL 186
>gi|402077303|gb|EJT72652.1| vacuolar protein sorting-associated protein 21 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 232
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 106/192 (55%), Gaps = 20/192 (10%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++WDTAGQERF S+APMY
Sbjct: 21 AVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLES---------- 225
YRNA AAL+V+D+T+ S K WV EL+R +V+ +VGNK DL S
Sbjct: 81 YRNAQAALVVYDLTKPASLVKAKHWVAELQRQASPGIVIALVGNKLDLTSDGGDAVADAD 140
Query: 226 ----------SREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+R+++ EEA Y++ ++ETSA + +VF ++ + S +S
Sbjct: 141 DGADDAAGGDARKISTEEAKGYAEEESLLFFETSAKTGVNVTEVFTAIANAIPETSLKSA 200
Query: 276 HTSSLRVYDSDN 287
S DN
Sbjct: 201 RGPSAAAGRGDN 212
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++
Sbjct: 21 AVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEI 64
>gi|356512992|ref|XP_003525198.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 217
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 95/148 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++M+ R+ F PTIG F I VG+ +K Q+WDTAGQERFR++ Y
Sbjct: 22 GVGKSNMLSRFAKDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFRAITSSY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A A+LV+DI+ S+ + W+ EL+ E +V+ +VGNK DL+ SREV +EE
Sbjct: 82 YRGALGAMLVYDISMRSSYENVSKWLLELREFGGEDMVVVLVGNKCDLDESREVEKEEGK 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
++++ G + ETSAL++ +E+VFL +
Sbjct: 142 GFAETEGLCFMETSALKNLNVEEVFLQM 169
>gi|29841162|gb|AAP06175.1| similar to NM_002868 RAB5B, member RAS oncogene family in Homo
sapiens [Schistosoma japonicum]
Length = 214
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 97/154 (62%), Gaps = 2/154 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGE--NKVKLQVWDTAGQERFRSMAP 173
VGK+S+V+R FS + TIGA+F T + + + VKL++WDTAGQER+ S+AP
Sbjct: 17 AVGKSSIVIRLCKSQFSEYQEATIGAAFMTHMVVLEDPPTTVKLEIWDTAGQERYHSLAP 76
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYR A AA++V+D+T SF K+WV EL +N + V+ + GNK DLE+ R V+ EE
Sbjct: 77 MYYRGAQAAVVVYDVTNKDSFVRAKSWVNELNKNANTAKVIALAGNKVDLEAQRVVSHEE 136
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
A Y+ G + ETSA + ++F +++ L
Sbjct: 137 AQEYANQNGLLFMETSAKTATNVPELFTAIAQRL 170
>gi|145518399|ref|XP_001445075.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412512|emb|CAK77678.1| unnamed protein product [Paramecium tetraurelia]
Length = 211
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ M++RY F+++ TIG F T + +GE+ VKLQ+WDTAGQ+RFR++ Y
Sbjct: 20 GVGKSCMLMRYSENQFTNNFYNTIGVDFKTKTVAIGEHNVKLQIWDTAGQDRFRTITCSY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ++V+DIT SF +KTW+ E+ + E + +VGNK D+ REV+ EE
Sbjct: 80 YRGAQGIIIVYDITDRESFENVKTWIAEIDKYASESVNRMLVGNKADITERREVSYEEGL 139
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
S+ +YETSA IE F +++K ++
Sbjct: 140 ELSRQFQIPFYETSAKSSINIEAAFTHITKNIL 172
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK+ M++RY F+++ TIG F T + +GE+ VKLQ+
Sbjct: 20 GVGKSCMLMRYSENQFTNNFYNTIGVDFKTKTVAIGEHNVKLQI 63
>gi|215422530|dbj|BAG85378.1| Rab5-GTP binding protein [Periplaneta americana]
Length = 213
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 93/152 (61%), Gaps = 2/152 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + V + VK ++WDTAGQER+ S+APMY
Sbjct: 35 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQPLRVEDTAVKFEIWDTAGQERYHSLAPMY 94
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DI +F K WVKEL + P+V+ + GNK DL + R V EEA
Sbjct: 95 YRGAQAAIVVYDIPNQDTFGRAKNWVKELHKQASPPIVIALAGNKADLANKRVVEFEEAQ 154
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ ETSA + D+FL ++K L
Sbjct: 155 QYADENRLLIMETSA--KTMVNDIFLAIAKKL 184
>gi|399163177|gb|AFP33164.1| rab family member, partial [Caenorhabditis elegans]
Length = 202
Score = 134 bits (337), Expect = 1e-28, Method: Composition-based stats.
Identities = 63/147 (42%), Positives = 96/147 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+++++R+IGK F T+G F + + KVKL VWDT GQERFRS+ Y
Sbjct: 15 GVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTCGQERFRSLVGSY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+A ALLV+DIT SF ++ W+ +L+R D +V+ ++GNK+DLE+ REV +EE
Sbjct: 75 YRHAIGALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVLIGNKSDLEADREVRKEEGE 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLN 262
+++ G + E SA ++ +E+ F+N
Sbjct: 135 AFAREFGLIFMEISAKTNEYVEEAFVN 161
>gi|226498408|ref|NP_001147694.1| ras-related protein RHN1 [Zea mays]
gi|195613140|gb|ACG28400.1| ras-related protein RHN1 [Zea mays]
gi|195652993|gb|ACG45964.1| ras-related protein RHN1 [Zea mays]
gi|238006674|gb|ACR34372.1| unknown [Zea mays]
Length = 203
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 97/154 (62%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 20 VGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPM 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL+ + ++ + GNK D+ +R V EEA
Sbjct: 80 YYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNPNTIVALAGNKVDMLDARHVAVEEA 139
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++ G + ETSA + D+F ++K L+
Sbjct: 140 KTYAQENGLFFMETSAKTAINVNDIFYEIAKRLL 173
>gi|17559536|ref|NP_507084.1| Protein F11A5.4 [Caenorhabditis elegans]
gi|3875761|emb|CAB07357.1| Protein F11A5.4 [Caenorhabditis elegans]
Length = 203
Score = 134 bits (337), Expect = 1e-28, Method: Composition-based stats.
Identities = 63/147 (42%), Positives = 96/147 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+++++R+IGK F T+G F + + KVKL VWDT GQERFRS+ Y
Sbjct: 16 GVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTCGQERFRSLVGSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+A ALLV+DIT SF ++ W+ +L+R D +V+ ++GNK+DLE+ REV +EE
Sbjct: 76 YRHAIGALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVLIGNKSDLEADREVRKEEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLN 262
+++ G + E SA ++ +E+ F+N
Sbjct: 136 AFAREFGLIFMEISAKTNEYVEEAFVN 162
>gi|414874079|tpg|DAA52636.1| TPA: ras protein RHN1 [Zea mays]
Length = 248
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 97/154 (62%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 65 VGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPM 124
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL+ + ++ + GNK D+ +R V EEA
Sbjct: 125 YYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNPNTIVALAGNKVDMLDARHVAVEEA 184
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++ G + ETSA + D+F ++K L+
Sbjct: 185 KTYAQENGLFFMETSAKTAINVNDIFYEIAKRLL 218
>gi|443893966|dbj|GAC71154.1| GTPase Rab5/YPT51 [Pseudozyma antarctica T-34]
Length = 652
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 100/155 (64%), Gaps = 9/155 (5%)
Query: 116 GVGKTSMVVRYIGKMFSHHISP-TIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
GVGKTS+V RY FS +P TIGASF T K+ V KV+LQ+WDTAGQERFRSMAPM
Sbjct: 346 GVGKTSLVHRYTSGQFSVASTPSTIGASFLTKKLIVDAVKVRLQLWDTAGQERFRSMAPM 405
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR ++AA++V+DIT SF ++ W++ELK+N+ LV+ VVG K DL S+ R+
Sbjct: 406 YYRGSHAAVIVYDITSMSSFLDVRAWIEELKKNMTTDLVIHVVGAKLDLAWSQ---RQVE 462
Query: 235 FHYSKSIGGTYYETSALQDQGIE---DVFLNVSKG 266
Y+++ ++ + Q Q I F NVS G
Sbjct: 463 LDYARATVKSWLQP--YQTQAIAFPTPGFANVSDG 495
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 340 GVGKTSMVVRYIGKMFSHHISP-TIGASFFTAKINVGENKVKLQL 383
GVGKTS+V RY FS +P TIGASF T K+ V KV+LQL
Sbjct: 346 GVGKTSLVHRYTSGQFSVASTPSTIGASFLTKKLIVDAVKVRLQL 390
>gi|367026926|ref|XP_003662747.1| hypothetical protein MYCTH_2303725 [Myceliophthora thermophila ATCC
42464]
gi|347010016|gb|AEO57502.1| hypothetical protein MYCTH_2303725 [Myceliophthora thermophila ATCC
42464]
Length = 233
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 101/170 (59%), Gaps = 19/170 (11%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++WDTAGQERF S+APMYY
Sbjct: 23 VGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYY 82
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLE------------ 224
RNA AAL+V+D+T+ S K WV EL+R +V+ +VGNK DL
Sbjct: 83 RNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLADDGAGSGGDAED 142
Query: 225 -------SSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
++R+++ EEA Y++ G ++ETSA + +VF ++ +
Sbjct: 143 AGGEESGNARKISTEEAKTYAEEEGLLFFETSAKTGYNVTEVFTAIANAI 192
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++
Sbjct: 23 VGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEI 65
>gi|221502146|gb|EEE27890.1| RAB, putative [Toxoplasma gondii VEG]
Length = 241
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%), Gaps = 1/152 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+ +VVR+ F + TIGA+F T +N+G VK ++WDTAGQER+RS+APMYY
Sbjct: 55 VGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVNLGSCIVKFEIWDTAGQERYRSLAPMYY 114
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREEAF 235
R A AA++V+DI+ SF K+WV+EL+ D +V+ + GNK DL + R+V +EA
Sbjct: 115 RGAAAAVVVYDISNRDSFQGAKSWVQELQSVNDRSNVVIALAGNKEDLAAERQVPNQEAQ 174
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G + ETSA + ++F ++ L
Sbjct: 175 QYADEHGILFLETSAKTGHNVNELFYEIAAAL 206
>gi|444317893|ref|XP_004179604.1| hypothetical protein TBLA_0C02780 [Tetrapisispora blattae CBS 6284]
gi|387512645|emb|CCH60085.1| hypothetical protein TBLA_0C02780 [Tetrapisispora blattae CBS 6284]
Length = 220
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 103/159 (64%), Gaps = 8/159 (5%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK--VKLQVWDTAGQERFRSMAP 173
VGK+S+V R++ F TIGA+F + I + +NK +K ++WDTAGQER++S+AP
Sbjct: 13 SVGKSSIVNRFVKDSFDELRESTIGAAFLSQTITL-KNKTVIKFEIWDTAGQERYKSLAP 71
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNV-DEPLVLCVVGNKTDL----ESSRE 228
MYYRNANAAL+V+DIT+ S ++WV ELK V DE LV+C+VGNK DL ES R
Sbjct: 72 MYYRNANAALVVYDITENDSLMKAQSWVDELKSKVGDENLVICLVGNKIDLCDEDESKRV 131
Query: 229 VNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
V ++A Y+ +YE SA + +++VF + + L
Sbjct: 132 VLTKDAKDYADEQNLMFYEVSAKSGENVKEVFQVIGEKL 170
>gi|255075421|ref|XP_002501385.1| predicted protein [Micromonas sp. RCC299]
gi|226516649|gb|ACO62643.1| predicted protein [Micromonas sp. RCC299]
Length = 202
Score = 134 bits (337), Expect = 2e-28, Method: Composition-based stats.
Identities = 64/157 (40%), Positives = 99/157 (63%), Gaps = 4/157 (2%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F + TIGA+F T ++V + VK ++WDTAGQER+ S+APM
Sbjct: 17 MGAGKSSLVLRFVKGQFFEYQESTIGAAFLTQTVSVSDATVKFEIWDTAGQERYHSLAPM 76
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLE----SSREVN 230
YYR A AA++V+DI SF K+WV+EL+R + LV+ + GNK D+ R+V+
Sbjct: 77 YYRGAAAAIIVYDIQSPSSFERAKSWVRELQRQGNANLVMALAGNKADIAEKEPEKRKVD 136
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+EA Y+ G + ETSA + D+F +++ L
Sbjct: 137 ADEAQAYADENGLFFMETSARTAANVNDLFYEIARKL 173
Score = 40.0 bits (92), Expect = 4.0, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
+G GK+S+V+R++ F + TIGA+F T ++V + VK ++
Sbjct: 17 MGAGKSSLVLRFVKGQFFEYQESTIGAAFLTQTVSVSDATVKFEI 61
>gi|171694842|ref|XP_001912345.1| hypothetical protein [Podospora anserina S mat+]
gi|170947663|emb|CAP59825.1| unnamed protein product [Podospora anserina S mat+]
Length = 219
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 104/157 (66%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ EN VK ++WDTAGQER++S+APM
Sbjct: 28 AVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPM 87
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +++ + GNK DL R +
Sbjct: 88 YYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLDLVTEQPDKRAIP 147
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
EA Y+K G ++ETSA + ++++F ++K L
Sbjct: 148 TAEAEAYAKEAGLLFFETSAKTAENVQELFTAIAKKL 184
>gi|47229414|emb|CAF99402.1| unnamed protein product [Tetraodon nigroviridis]
Length = 230
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 106/192 (55%), Gaps = 14/192 (7%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVN----- 230
YR A AA++V+DIT SFA K WVKEL+R +V+ + GNK DL S R V+
Sbjct: 91 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLASKRAVDFQVSA 150
Query: 231 ---------REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLR 281
++A Y+ + ETSA + ++F+ ++K L ++ SS+R
Sbjct: 151 DELLLGQKTEQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKRLPKSEPQAAGGSSVR 210
Query: 282 VYDSDNITSANP 293
D +A P
Sbjct: 211 NRGVDLTEAAQP 222
>gi|298712050|emb|CBJ32986.1| Rab8A, RAB family GTPase [Ectocarpus siliculosus]
Length = 205
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 96/158 (60%), Gaps = 7/158 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +++RY FS TIG F I++ ++KLQ+WDTAGQERFR++ Y
Sbjct: 21 GVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
+R A LLV+D+T SF +I+ WV +++++ D + ++GNK D++ REV+REE
Sbjct: 81 FRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGA 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQE 273
+ G ++ETSA D +NV KG I +++E
Sbjct: 141 QLAAEYGIQFFETSAKND-------INVEKGFITIARE 171
>gi|327285133|ref|XP_003227289.1| PREDICTED: ras-related protein Rab-2A-like [Anolis carolinensis]
Length = 234
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 99/152 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F + T+G F + I + + K+KLQ+WDTAGQE FRS+A Y
Sbjct: 16 GVGKSCLLLQFTDKRFLSSHNLTVGVEFGSRMITINDKKIKLQIWDTAGQESFRSIARSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + TW+++ ++N +V+ +VGNK+DLE R V REE
Sbjct: 76 YRGAAGALLVYDITKRDTFNHLHTWLEDARKNSSSHIVIVLVGNKSDLEDQRVVQREEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++ G + ETSA +E+ F+ ++KG+
Sbjct: 136 AFAREHGMVFLETSARTATNVEEAFICIAKGI 167
>gi|28866038|emb|CAD26971.1| Rab-related small GTP-binding protein [Simmondsia chinensis]
Length = 200
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 97/153 (63%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+++ ++ F TIGA+FF+ + V + VK ++WDTAGQER+ +APM
Sbjct: 19 MGAGKSSLLLLFVKGHFLEFQESTIGAAFFSHTLAVNDATVKFEIWDTAGQERYHILAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SFA K WV+EL++ + +V+ + GNK DLE R V EEA
Sbjct: 79 YYRGAAAAIIVYDITSADSFALAKKWVQELQKQGNPNMVMALAGNKADLEDRRSVPAEEA 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA + ++F ++K L
Sbjct: 139 RIYAEDNGLFFMETSAKTALNVNEIFYEIAKRL 171
>gi|67473696|ref|XP_652598.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469466|gb|EAL47212.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790052|dbj|BAD82822.1| small GTPase EhRab11D [Entamoeba histolytica]
gi|407040023|gb|EKE39941.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449703380|gb|EMD43841.1| small GTPase EhRab11D, putative [Entamoeba histolytica KU27]
Length = 213
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 100/166 (60%), Gaps = 1/166 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+++++R+ F TIG F + +I + V+ Q+WDTAGQER+R++ Y
Sbjct: 19 GVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIWDTAGQERYRAITNAY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A A+LV+D+T+ SF ++ W+ EL+ N D+ +V +VGNK DLE REV+ +E
Sbjct: 79 YRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVGNKCDLEQMREVSIKEGE 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLR 281
+K IG ++ETSA + +E F+ + + IC Q L S +
Sbjct: 139 DMAKKIGAFFFETSAFDGKNVETAFMAIIQK-ICDEQTRLRASETK 183
>gi|388857972|emb|CCF48417.1| related to GTP-binding protein Rab5c [Ustilago hordei]
Length = 672
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 86/117 (73%), Gaps = 2/117 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISP-TIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
GVGKTS+V RY F+ +P TIGASF T K+ V KV+LQ+WDTAGQERFRSMAPM
Sbjct: 354 GVGKTSLVHRYTSGQFAIASTPSTIGASFLTKKLIVDGVKVRLQLWDTAGQERFRSMAPM 413
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLE-SSREVN 230
YYR + AA++V+DIT SF I+ W++ELK+N+ L++ VVG K DL SSR+V+
Sbjct: 414 YYRGSQAAVIVYDITSMSSFMDIQAWIEELKKNMSTDLLIHVVGAKADLAWSSRQVD 470
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 340 GVGKTSMVVRYIGKMFSHHISP-TIGASFFTAKINVGENKVKLQL 383
GVGKTS+V RY F+ +P TIGASF T K+ V KV+LQL
Sbjct: 354 GVGKTSLVHRYTSGQFAIASTPSTIGASFLTKKLIVDGVKVRLQL 398
>gi|281342890|gb|EFB18474.1| hypothetical protein PANDA_016684 [Ailuropoda melanoleuca]
Length = 199
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 97/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 8 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 67
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL+ +REV EEA
Sbjct: 68 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLQQAREVPTEEAR 127
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 128 MFAENNGLLFLETSALDSTNVELAFETVLK 157
>gi|402470455|gb|EJW04677.1| small GTP-binding protein domain protein [Edhazardia aedis USNM
41457]
Length = 194
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 100/154 (64%)
Query: 114 WLGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAP 173
+ VGK+S+V++Y+ + F+ + TIGA+F + + + VK ++WDTAGQER+ S+ P
Sbjct: 18 YYSVGKSSLVMKYVKREFNPNEESTIGAAFCAKTVQLKDCNVKYEIWDTAGQERYNSLIP 77
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
MYYR A AL+V+DIT SF K WV ELK + + +VGNK+DL++SR+++ E+
Sbjct: 78 MYYRGAQVALIVYDITNPQSFTCAKKWVDELKEEKPKDFLKVLVGNKSDLDASRKIHFED 137
Query: 234 AFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+Y++ G +YETSA ++ +F +V+ L
Sbjct: 138 GLNYAEQNGLLFYETSAKTGYNVDKIFEDVASIL 171
>gi|357117431|ref|XP_003560472.1| PREDICTED: ras-related protein Rab5-like [Brachypodium distachyon]
Length = 205
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 100/161 (62%), Gaps = 7/161 (4%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-------GENKVKLQVWDTAGQER 167
LG GKTS+VVR+ ++ TIGA+FF+ + V E+ V+ +WDTAGQER
Sbjct: 17 LGAGKTSIVVRFAKGLYYDCQESTIGAAFFSQALAVRSGGAGGEEDTVRFDIWDTAGQER 76
Query: 168 FRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSR 227
+ S+APMYYR A AA++V+DIT S+ K W+ EL+R + LV+ +VGNK DLE R
Sbjct: 77 YHSLAPMYYRGAAAAVVVYDITSTDSYIRAKKWIDELQRQGNPHLVMALVGNKVDLEEKR 136
Query: 228 EVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
++ +EA Y++ G + ETSA I ++F +++ L+
Sbjct: 137 QIRTQEALEYAERNGLFFVETSAKTAHHISELFYELAQRLV 177
>gi|168030601|ref|XP_001767811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680893|gb|EDQ67325.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 174
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPM 174
GVGK+ +++R++ F T+GASF + I++ ++ VK ++WDTAGQER+ S+AP+
Sbjct: 12 GVGKSCILLRFVRGQFDPSSKVTVGASFLSQTISLQDSTNVKFEIWDTAGQERYASLAPL 71
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT +F + WVKEL+++ + +V+ +VGNK DLE+ REV+ EA
Sbjct: 72 YYRGAAAAVVVYDITNPETFLKAQFWVKELQKHGNPDIVMALVGNKADLENEREVSHAEA 131
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+KS G + ETSA + + +F ++K L
Sbjct: 132 QAYAKSNGMFFIETSAKTSENVNQLFEEIAKRL 164
>gi|240976227|ref|XP_002402331.1| RAS-related protein, putative [Ixodes scapularis]
gi|215491138|gb|EEC00779.1| RAS-related protein, putative [Ixodes scapularis]
Length = 175
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 91/150 (60%), Gaps = 6/150 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + E VK ++WDTAGQER+ S+APMY
Sbjct: 32 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDETTVKFEIWDTAGQERYHSLAPMY 91
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +F KTWVKEL+R +V+ + GNK DL S R V E
Sbjct: 92 YRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPSIVIALAGNKADLASKRAVELE--- 148
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
G + ETSA + D+FL + +
Sbjct: 149 ---VENGLLFMETSAKTAMNVNDIFLAIGE 175
>gi|145488631|ref|XP_001430319.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397416|emb|CAK62921.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 104/160 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V+R+ +F T+GA+F I V K Q+WDTAGQE+++S+ P+Y
Sbjct: 14 GVGKSSIVLRFCSDIFKVTHESTLGAAFMARTIEVNGINFKFQIWDTAGQEKYKSLTPLY 73
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AL+V+DIT SF +K+WV ELK + + ++ +VGNK DL +V+ +EA
Sbjct: 74 YREAQVALIVYDITHKDSFDVLKSWVNELKAHGPKKIIQVLVGNKNDLIEDEKVSYDEAN 133
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+Y++ IG + TS +++GI+++F+++++ ++ Q L
Sbjct: 134 NYAQQIGASLKLTSCKENKGIQELFVSIAEQILYEEQNKL 173
>gi|315040105|ref|XP_003169430.1| GTP-binding protein ypt5 [Arthroderma gypseum CBS 118893]
gi|311346120|gb|EFR05323.1| GTP-binding protein ypt5 [Arthroderma gypseum CBS 118893]
Length = 216
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 115/194 (59%), Gaps = 17/194 (8%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ E VK ++WDTAGQER++S+APM
Sbjct: 26 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDETTTVKFEIWDTAGQERYKSLAPM 85
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +++ + GNK DL R +
Sbjct: 86 YYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLDLVNESPDKRAIE 145
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITS 290
+A Y+K G ++ETSA + ++F ++K L + +LR
Sbjct: 146 TADAAAYAKEAGLLFFETSAKTSTNVRELFTAIAKK---LPLDQAGPRNLR--------- 193
Query: 291 ANPRGVVEITPLSS 304
ANPR V++ P S+
Sbjct: 194 ANPRPGVDLRPESA 207
>gi|148683326|gb|EDL15273.1| RAB25, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 235
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 44 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 103
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 104 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAC 163
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 164 MFAENNGLLFLETSALDSTNVELAFQTVLK 193
>gi|365983882|ref|XP_003668774.1| hypothetical protein NDAI_0B04980 [Naumovozyma dairenensis CBS 421]
gi|343767541|emb|CCD23531.1| hypothetical protein NDAI_0B04980 [Naumovozyma dairenensis CBS 421]
Length = 227
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 108/189 (57%), Gaps = 22/189 (11%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK------VKLQVWDTAGQERFRS 170
VGK+S+V R++ F TIGA+F I + + + +K ++WDTAGQER++S
Sbjct: 14 VGKSSIVHRFVKDSFDELRESTIGAAFLAQTIKIKDTETQEDIDIKFEIWDTAGQERYKS 73
Query: 171 MAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNV-DEPLVLCVVGNKTDL------ 223
+APMYYRNANAAL+V+D+TQ +S + +WV ELK V DE LV+ +VGNK DL
Sbjct: 74 LAPMYYRNANAALVVYDLTQKNSLSKAMSWVDELKSKVGDEDLVIYLVGNKLDLCDNVEN 133
Query: 224 ---------ESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQES 274
E+ R V +EA Y+K G + E SA QG+++VF + + L + +
Sbjct: 134 RGGKEQEEEENKRVVTTQEADSYAKDQGLLFAEISAKTGQGVKEVFQTIGEKLYEIKKPE 193
Query: 275 LHTSSLRVY 283
L R Y
Sbjct: 194 LLAKKNREY 202
>gi|168014172|ref|XP_001759627.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|162689166|gb|EDQ75539.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|167832326|dbj|BAG09233.1| plant-unique Rab5 homolog [Physcomitrella patens subsp. patens]
Length = 208
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 96/146 (65%), Gaps = 1/146 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPM 174
GVGK+ +V+R++ F T+GASF + I + ++ VK ++WDTAGQER+ S+AP+
Sbjct: 42 GVGKSCIVLRFVRGQFDPSSKVTVGASFLSQTITLKDSTSVKFEIWDTAGQERYASLAPL 101
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT +F + WVKEL+++ + +V+ +VGNK DLE REV REEA
Sbjct: 102 YYRGAAAAVVVYDITNPETFLKAQFWVKELQKHGNPDIVMALVGNKADLEYQREVTREEA 161
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVF 260
Y+ S G Y ETSA + +F
Sbjct: 162 QTYADSNGMFYIETSAKTSDNVNQLF 187
>gi|431892315|gb|ELK02755.1| Ras-related protein Rab-25 [Pteropus alecto]
Length = 190
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 106/171 (61%), Gaps = 5/171 (2%)
Query: 101 NSRVPNCFEAN-WFWL----GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKV 155
+ + + FEA+ W L GVGKT+++ R+ FSH TIG F T + +G V
Sbjct: 20 DDKALSTFEAHGWVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAV 79
Query: 156 KLQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLC 215
K Q+WDTAG ER+R++ YYR A ALLVFD+T++ +++ ++ W+KEL + + +V+
Sbjct: 80 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVM 139
Query: 216 VVGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKG 266
+VGNK+DL +REV +EA ++++ G + ETSAL +E F V KG
Sbjct: 140 LVGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKG 190
>gi|310789342|gb|EFQ24875.1| Ras family protein [Glomerella graminicola M1.001]
Length = 237
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 100/171 (58%), Gaps = 20/171 (11%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++WDTAGQERF S+APMYY
Sbjct: 24 VGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYY 83
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLES----------- 225
RNA AAL+V+D+T+ S K WV EL+R +V+ +VGNK DL S
Sbjct: 84 RNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTSETDSGSAGDSE 143
Query: 226 ---------SREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+R+V+ EEA Y++ ++ETSA + +VF ++ +
Sbjct: 144 GADADDSGDARKVSTEEAKTYAEEESLLFFETSAKTGHNVTEVFTAIANAI 194
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++
Sbjct: 24 VGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEI 66
>gi|5106984|gb|AAD39911.1|AF119675_1 small GTP-binding protein RAB25 [Mus musculus]
gi|5106986|gb|AAD39912.1|AF119676_1 small GTP-binding protein RAB25 [Mus musculus]
Length = 213
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAC 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFQTVLK 171
>gi|366990901|ref|XP_003675218.1| hypothetical protein NCAS_0B07630 [Naumovozyma castellii CBS 4309]
gi|342301082|emb|CCC68847.1| hypothetical protein NCAS_0B07630 [Naumovozyma castellii CBS 4309]
Length = 216
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 103/162 (63%), Gaps = 11/162 (6%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFF--TAKINVGENK----VKLQVWDTAGQERFRS 170
VGK+S+V R++ F TIGA+F T KI E + +K ++WDTAGQER++S
Sbjct: 14 VGKSSIVHRFVKDSFDELRESTIGAAFLSQTIKIKAEEQEEDVVIKFEIWDTAGQERYKS 73
Query: 171 MAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNV-DEPLVLCVVGNKTDL----ES 225
+APMYYRNANAAL+V+D+TQ S ++WV+ELK V DE LV+ +VGNK DL E
Sbjct: 74 LAPMYYRNANAALVVYDLTQKDSLVKARSWVEELKNKVGDEDLVIFLVGNKLDLCEGEED 133
Query: 226 SREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
R V+ EA Y++ + E SA QG+++VF ++ + L
Sbjct: 134 LRAVDTSEAKAYAEEQNLLFTEVSAKTGQGVKEVFRSIGEKL 175
>gi|327298001|ref|XP_003233694.1| RAB GTPase [Trichophyton rubrum CBS 118892]
gi|326463872|gb|EGD89325.1| RAB GTPase [Trichophyton rubrum CBS 118892]
gi|326470113|gb|EGD94122.1| RAB GTPase [Trichophyton tonsurans CBS 112818]
gi|326484352|gb|EGE08362.1| GTP-binding protein ypt5 [Trichophyton equinum CBS 127.97]
Length = 216
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 117/194 (60%), Gaps = 17/194 (8%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I++ E VK ++WDTAGQER++S+APM
Sbjct: 26 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDETTTVKFEIWDTAGQERYKSLAPM 85
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL--ES--SREVN 230
YYRNAN A++V+DITQ S K+WVKEL+R +E +++ + GNK DL ES R +
Sbjct: 86 YYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLDLVNESPDKRAIE 145
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITS 290
+A Y+K G ++ETSA + ++F ++K L + +LR
Sbjct: 146 TADAAAYAKEAGLLFFETSAKTSTNVRELFTAIAKK---LPLDQAGPRNLR--------- 193
Query: 291 ANPRGVVEITPLSS 304
ANPR V++ P S+
Sbjct: 194 ANPRPGVDLRPESA 207
>gi|301783133|ref|XP_002926982.1| PREDICTED: ras-related protein Rab-25-like [Ailuropoda melanoleuca]
Length = 213
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 97/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL+ +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLQQAREVPTEEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>gi|145476009|ref|XP_001424027.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391089|emb|CAK56629.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 104/160 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V+R+ +F T+GA+F I V K Q+WDTAGQE+++S+ P+Y
Sbjct: 14 GVGKSSIVLRFCSDIFKVTHESTLGAAFMARTIEVNGINFKFQIWDTAGQEKYKSLTPLY 73
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AL+V+DIT SF +K+WV ELK + + ++ +VGNK DL +V+ +EA
Sbjct: 74 YREAQVALIVYDITHKDSFDVLKSWVNELKAHGPKKIIQVLVGNKNDLIEDEKVSYDEAN 133
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+Y++ IG + TS +++GI+++F+++++ ++ Q L
Sbjct: 134 NYAQQIGASLKLTSCKENKGIQELFVSIAEQILYEEQNKL 173
>gi|448535786|ref|XP_003871017.1| Vps21 late endosomal Rab small monomeric GTPase [Candida
orthopsilosis Co 90-125]
gi|380355373|emb|CCG24891.1| Vps21 late endosomal Rab small monomeric GTPase [Candida
orthopsilosis]
Length = 223
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 98/165 (59%), Gaps = 15/165 (9%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K +G+ +K ++WDTAGQERF S+APMY
Sbjct: 21 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDRTIKYEIWDTAGQERFASLAPMY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL------------ 223
YRNA AA++V+DIT+ SF + WVKEL + + + +VGNK DL
Sbjct: 81 YRNAQAAIVVYDITKPASFVKARHWVKELHEQASKDITIALVGNKYDLVEDEPEDGNTGE 140
Query: 224 ---ESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
E R+V++EE + G ++E SA + +VF+ + +
Sbjct: 141 GDQELLRKVSKEEGQALADEEGLLFFEASAKTSYNVNEVFVGIGE 185
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K +G+ +K ++
Sbjct: 21 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDRTIKYEI 64
>gi|302903042|ref|XP_003048772.1| hypothetical protein NECHADRAFT_62851 [Nectria haematococca mpVI
77-13-4]
gi|256729706|gb|EEU43059.1| hypothetical protein NECHADRAFT_62851 [Nectria haematococca mpVI
77-13-4]
Length = 236
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 99/170 (58%), Gaps = 19/170 (11%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++WDTAGQERF S+APMYY
Sbjct: 24 VGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYY 83
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLES----------- 225
RNA AAL+V+D+T+ S K WV EL+R +V+ +VGNK DL
Sbjct: 84 RNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTGDSGAAADSQNG 143
Query: 226 --------SREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+R+V+ EEA Y++ ++ETSA + +VF ++ +
Sbjct: 144 DDGEESGDARKVSTEEAQSYAEEESLLFFETSAKSGHNVTEVFTAIANAI 193
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++
Sbjct: 24 VGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEI 66
>gi|31980838|ref|NP_058595.2| ras-related protein Rab-25 [Mus musculus]
gi|46397889|sp|Q9WTL2.2|RAB25_MOUSE RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|12833818|dbj|BAB22676.1| unnamed protein product [Mus musculus]
gi|13879300|gb|AAH06624.1| RAB25, member RAS oncogene family [Mus musculus]
gi|112293009|dbj|BAF02882.1| Rab25 [Mus musculus]
gi|148683327|gb|EDL15274.1| RAB25, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 213
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAC 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFQTVLK 171
>gi|390340630|ref|XP_003725281.1| PREDICTED: ras-related protein Rab-31-like [Strongylocentrotus
purpuratus]
Length = 163
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 95/147 (64%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+ R++ F TIG +F + + + +WDTAGQERFRSMAP+ Y
Sbjct: 16 VGKTSITTRFVQGNFDEKYVSTIGGAFLSRSLYFQNIEYSFALWDTAGQERFRSMAPLTY 75
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R+A AAL+V+DIT+ SF + +W+ EL+ E +++ V+GNK DLES R V+RE A
Sbjct: 76 RSAAAALIVYDITKQDSFEDVDSWISELRSMGPEEILIYVIGNKVDLESRRVVDREVAER 135
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNV 263
Y+++ G ++ +SA QGIED+F ++
Sbjct: 136 YAQTKGVFHFHSSAKTGQGIEDIFYHI 162
>gi|50543172|ref|XP_499752.1| YALI0A04367p [Yarrowia lipolytica]
gi|54042069|sp|P41925.2|RYL2_YARLI RecName: Full=Ras-like GTP-binding protein RYL2
gi|49645617|emb|CAG83676.1| YALI0A04367p [Yarrowia lipolytica CLIB122]
Length = 209
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 94/152 (61%), Gaps = 7/152 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT V RY+ F + TIGASF ++ V + V+LQ+WDTAGQERFRSMAP+Y
Sbjct: 15 GVGKTCFVTRYVNNKFQAGQASTIGASFSRKRVVVNDTTVRLQIWDTAGQERFRSMAPIY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVNR 231
YR+A+ +L +D+T SF A+ W+ ELK+N+ +++ +VG K DL S REV
Sbjct: 75 YRSASCGILCYDVTSRASFDAMHLWLLELKQNLSSDIIIHIVGTKVDLVKDEPSLREVPF 134
Query: 232 EEAFHYSKSI---GGTYYETSALQDQGIEDVF 260
E+ Y+ +E SA D+G+E+VF
Sbjct: 135 EQCVEYASEWLQDDSCCHEISAKDDEGVEEVF 166
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKT V RY+ F + TIGASF ++ V + V+LQ+
Sbjct: 15 GVGKTCFVTRYVNNKFQAGQASTIGASFSRKRVVVNDTTVRLQI 58
>gi|410075027|ref|XP_003955096.1| hypothetical protein KAFR_0A05260 [Kazachstania africana CBS 2517]
gi|372461678|emb|CCF55961.1| hypothetical protein KAFR_0A05260 [Kazachstania africana CBS 2517]
Length = 235
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 107/182 (58%), Gaps = 7/182 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ R++ F H TIG F + + + + ++LQ+WDTAGQERFRS+ P Y
Sbjct: 32 GVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSY 91
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELK-RNVDEPLVLCVVGNKTDLESSREVNREEA 234
R++ A++V+DIT+ SF I WV ++K +E +VLC+VGNK DL R+V+ EE
Sbjct: 92 IRDSKVAIVVYDITKKKSFEFIDKWVDDVKNERGEENVVLCIVGNKNDLGDERQVSTEEG 151
Query: 235 FHYSKSIGGT-YYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
+K +G + ETS ++++F ++K L E+ SSL DN S+N
Sbjct: 152 EAKAKKLGAKIFMETSTKAGYNVKNLFKRIAKSLPEFQSENTDESSL-----DNKLSSNT 206
Query: 294 RG 295
G
Sbjct: 207 GG 208
>gi|149048127|gb|EDM00703.1| RAB25, member RAS oncogene family (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 199
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 8 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 67
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 68 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAC 127
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 128 MFAENNGLLFLETSALDSTNVELAFETVLK 157
>gi|440903633|gb|ELR54270.1| Ras-related protein Rab-25, partial [Bos grunniens mutus]
Length = 199
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G +K Q+WDTAG ER+R++ Y
Sbjct: 8 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAY 67
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL SREV EEA
Sbjct: 68 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVPTEEAR 127
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 128 MFAENNGLLFLETSALDSTNVELAFETVLK 157
>gi|340503282|gb|EGR29885.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 213
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 110/186 (59%), Gaps = 7/186 (3%)
Query: 96 VGLSINSRVPNCFEANWFWLG---VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGE 152
V + NS+ + + +LG VGKT ++ R++ +F PTIG F I + E
Sbjct: 8 VSMDSNSQNNSRIKHKIIFLGDQHVGKTCIIERFMYDVFDEKSHPTIGVDFLAKTITIDE 67
Query: 153 NKVKLQVWDTAGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELK--RNVDE 210
++LQ+WDTAGQERFRS+ P Y R+A A++VFDITQ SF + W+++ K R +D
Sbjct: 68 KSIRLQLWDTAGQERFRSLIPSYLRDATCAVIVFDITQKTSFDNLDKWIQDYKDNRGIDA 127
Query: 211 PLVLCVVGNKTDLESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICL 270
P +L V NK D++ SREV ++EA ++SI YYE SA + + ++F +++ L +
Sbjct: 128 PFIL--VANKLDMKLSREVTQQEAEQKAQSIRVNYYEISAKTGENVLNMFKSMATSLQPI 185
Query: 271 SQESLH 276
Q L+
Sbjct: 186 EQSILN 191
>gi|410074687|ref|XP_003954926.1| hypothetical protein KAFR_0A03560 [Kazachstania africana CBS 2517]
gi|372461508|emb|CCF55791.1| hypothetical protein KAFR_0A03560 [Kazachstania africana CBS 2517]
Length = 207
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 118/202 (58%), Gaps = 20/202 (9%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK----VKLQVWDTAGQERFRSMA 172
VGK+S+V R++ F TIGA+F + I + +N VK ++WDTAGQER++S+A
Sbjct: 14 VGKSSIVNRFVKDSFEDLRESTIGAAFLSQTIKLNDNGKEVIVKFEIWDTAGQERYKSLA 73
Query: 173 PMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNV-DEPLVLCVVGNKTDL----ESSR 227
PMYYRNANAAL+V+DIT+ S KTWV+ELK V D+ +V+ +VGNK D+ S R
Sbjct: 74 PMYYRNANAALVVYDITELDSLNKAKTWVEELKNKVGDDNIVIYLVGNKLDVCEKDSSKR 133
Query: 228 EVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDN 287
V+ E A Y+K G + ETSA I++ F + + L + + ++T D D
Sbjct: 134 LVSLEGAKEYAKEQGLLFIETSAKTGANIKETFQEIGEKLYDIKKTEVNT------DLDG 187
Query: 288 ITSANPRGVVEITPLSSLDTPP 309
T G +EI+ S+ DT
Sbjct: 188 NT-----GEIEISKPSTNDTTS 204
>gi|294899961|ref|XP_002776830.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239884031|gb|EER08646.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 232
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 107/178 (60%), Gaps = 1/178 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+++R+ F + TIG F IN+ + +V+LQ+WDTAGQERFR++ P Y
Sbjct: 33 AVGKSSLLMRFCENRFDSNFVITIGVDFRVKTINIQDREVRLQIWDTAGQERFRTITPAY 92
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNA LL++D+T SF + WV+ L + D+ + +VGNK D+ + R+V+ EE
Sbjct: 93 YRNAMGVLLIYDMTDSKSFKNVDYWVRNLDEHADKTVQKLLVGNKADMAAKRKVSTEEGQ 152
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
+ G T++ETSA +E F +++ +C S + L+ RV+++ ++ S+N
Sbjct: 153 ALADKYGMTFFETSAKSGLNVEQAFRAIAE-RVCDSYDLLNGIEPRVHNNGSVASSNA 209
>gi|167832328|dbj|BAG09234.1| plant-unique Rab5 homolog [Physcomitrella patens subsp. patens]
Length = 226
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 103/155 (66%), Gaps = 1/155 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGEN-KVKLQVWDTAGQERFRSMAPM 174
GVGK+ +++R++ F T+GASF + I++ ++ VK ++WDTAGQER+ S+AP+
Sbjct: 41 GVGKSCILLRFVRGQFDPSSKVTVGASFLSQTISLQDSTNVKFEIWDTAGQERYASLAPL 100
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT +F + WVKEL+++ + +V+ +VGNK DLE+ REV+ EA
Sbjct: 101 YYRGAAAAVVVYDITNPETFLKAQFWVKELQKHGNPDIVMALVGNKADLENEREVSHAEA 160
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLIC 269
Y+KS G + ETSA + + +F ++G I
Sbjct: 161 QAYAKSNGMFFIETSAKTSENVNQLFEQCTEGDIA 195
>gi|108863008|gb|ABA99930.2| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
Length = 249
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 93/146 (63%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 20 VGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPM 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL+ + ++ + GNK D+ +R+V EEA
Sbjct: 80 YYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMVEARQVPAEEA 139
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVF 260
Y++ G + ETSA + DVF
Sbjct: 140 KTYAQENGLFFMETSAKTAINVNDVF 165
>gi|38194437|gb|AAR13228.1| Rab family GTPase Rab8 [Fucus distichus]
Length = 205
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 97/158 (61%), Gaps = 7/158 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +++RY FS TIG F I++ ++KLQ+WDTAGQERFR++ Y
Sbjct: 21 GVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
+R A LLV+D+T SF +I+ WV +++++ D + ++GNK D++ REV++EE
Sbjct: 81 FRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSKEEGA 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQE 273
+ + G ++ETSA D +NV KG I +++E
Sbjct: 141 NLAAEYGIQFFETSAKND-------INVEKGFITIARE 171
>gi|91082425|ref|XP_970378.1| PREDICTED: similar to RAB18, member RAS oncogene family [Tribolium
castaneum]
gi|270007517|gb|EFA03965.1| hypothetical protein TcasGA2_TC014110 [Tribolium castaneum]
Length = 204
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 95/146 (65%), Gaps = 2/146 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S++VR+ F + TIG F T K+ V +N VKL +WDTAGQERFR++ P Y
Sbjct: 18 GVGKSSILVRFTEDNFDPDQTLTIGVDFKTKKLTVDDNTVKLAIWDTAGQERFRTLTPSY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKR-NVDEPLVLCVVGNKTDLESSREVNREEA 234
YR+A A+LV+D+T Y +FA ++TW+ EL+ + +V +VGNK D E +REVNREEA
Sbjct: 78 YRDAQGAILVYDVTNYSTFAKLETWLNELETYSTKANIVKMIVGNKIDKE-NREVNREEA 136
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVF 260
+++ Y E SA G++ F
Sbjct: 137 MKFARRHQTLYIEASAKTRDGVQCAF 162
>gi|173259|gb|AAA35246.1| ras-like protein [Yarrowia lipolytica]
Length = 209
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 93/152 (61%), Gaps = 7/152 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT V RY+ F + TIGASF ++ V + V+LQ+WDTAGQERFRSMAP+Y
Sbjct: 15 GVGKTCFVTRYVNNKFQAGQASTIGASFSRKRVVVNDTTVRLQIWDTAGQERFRSMAPIY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVNR 231
YR+A +L +D+T SF A+ W+ ELK+N+ +++ +VG K DL S REV
Sbjct: 75 YRSATCGILCYDVTSRASFDAMHLWLLELKQNLSSDIIIHIVGTKVDLVKDEPSLREVPF 134
Query: 232 EEAFHYSKSI---GGTYYETSALQDQGIEDVF 260
E+ Y+ +E SA D+G+E+VF
Sbjct: 135 EQCVEYASEWLQDDSCCHEISAKDDEGVEEVF 166
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKT V RY+ F + TIGASF ++ V + V+LQ+
Sbjct: 15 GVGKTCFVTRYVNNKFQAGQASTIGASFSRKRVVVNDTTVRLQI 58
>gi|388580783|gb|EIM21095.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 315
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 96/132 (72%), Gaps = 5/132 (3%)
Query: 108 FEANWFWLG---VGKTSMVVRYIGKMFSHHISP-TIGASFFTAKINVGENKVKLQVWDTA 163
EA LG VGKTS+V RY +FS + + TIGASF T +++V + +V+LQ+WDTA
Sbjct: 25 LEAKIVILGTQRVGKTSLVERYTNGVFSSNCTASTIGASFLTKRMSVDKTRVRLQIWDTA 84
Query: 164 GQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL 223
GQERFRSM P+YYR A+AA++V+DIT Y SF +++W+KEL N+++ +++ VVG+K+DL
Sbjct: 85 GQERFRSMTPIYYRGAHAAIIVYDITNYDSFLQVQSWLKELIENLNQNILIAVVGSKSDL 144
Query: 224 ESS-REVNREEA 234
S R+V+ A
Sbjct: 145 SPSYRKVDFSHA 156
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Query: 332 FEANWFWLG---VGKTSMVVRYIGKMFSHHISP-TIGASFFTAKINVGENKVKLQL 383
EA LG VGKTS+V RY +FS + + TIGASF T +++V + +V+LQ+
Sbjct: 25 LEAKIVILGTQRVGKTSLVERYTNGVFSSNCTASTIGASFLTKRMSVDKTRVRLQI 80
>gi|254586679|ref|XP_002498907.1| ZYRO0G21384p [Zygosaccharomyces rouxii]
gi|238941801|emb|CAR29974.1| ZYRO0G21384p [Zygosaccharomyces rouxii]
Length = 218
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 108/181 (59%), Gaps = 17/181 (9%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-------VKLQVWDTAGQERFR 169
VGK+S+V R++ F TIGA+F + I + E+K +K ++WDTAGQER++
Sbjct: 14 VGKSSIVHRFVKDSFDEFRESTIGAAFLSQTIKI-EDKGSQQEVVIKFEIWDTAGQERYK 72
Query: 170 SMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDE-PLVLCVVGNKTDL----- 223
S+APMYYRNANAAL+V+D+TQ S A + WV ELK V E LV+C+VGNK DL
Sbjct: 73 SLAPMYYRNANAALVVYDVTQQDSLAKAQGWVNELKTKVGEDDLVICLVGNKLDLCTEEG 132
Query: 224 ESS---REVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSL 280
ESS + V +A Y+ G ++E SA +G++ VF ++ + L + L S
Sbjct: 133 ESSSKPKAVESSDAEGYANEQGLLFHEVSAKTGEGVKQVFQSIGEKLYEFKKHELANSKG 192
Query: 281 R 281
R
Sbjct: 193 R 193
>gi|354481560|ref|XP_003502969.1| PREDICTED: ras-related protein Rab-25-like [Cricetulus griseus]
Length = 213
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAC 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFQTVLK 171
>gi|328874189|gb|EGG22555.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 201
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 95/152 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F + + + VK ++WDTAGQER+ ++APMY
Sbjct: 19 AVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEIWDTAGQERYHTLAPMY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DI SF WVKEL+R +V+ + GNK DL + R+V EA
Sbjct: 79 YRGAQAAIVVYDIRSQDSFERAIKWVKELQRQGSPNIVIALAGNKLDLAAKRKVETAEAQ 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA Q + ++F+ ++K L
Sbjct: 139 QYAEENGLLFMETSAKTAQNVNELFVEIAKKL 170
>gi|413933483|gb|AFW68034.1| putative GTP-binding protein [Zea mays]
Length = 199
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 96/151 (63%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 20 VGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPM 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT SF K WV+EL+ ++ ++ + GNK D+ +R+V EEA
Sbjct: 80 YYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNQNTIVALAGNKADMLDARQVPAEEA 139
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y++ G + ETSA + D+F + +
Sbjct: 140 KAYAQENGLFFMETSAKTAINVNDIFYEIGE 170
>gi|157874060|ref|XP_001685525.1| putative ras-related protein rab-2a [Leishmania major strain
Friedlin]
gi|68128597|emb|CAJ08729.1| putative ras-related protein rab-2a [Leishmania major strain
Friedlin]
Length = 211
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 100/161 (62%), Gaps = 8/161 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F I++ VKLQ+WDTAGQE FRS+ Y
Sbjct: 17 GVGKSCLLLQFTDKRFEPLHDLTIGVEFGARLISIQGKSVKLQIWDTAGQESFRSITRSY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A+ ALLV+D+T+ +F +++W+++ K N + LV+ ++GNK DLES R+V+REE
Sbjct: 77 YRGASGALLVYDVTRRDTFTHLQSWLEDAKANANTALVIMLIGNKCDLESKRQVSREEGE 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFL--------NVSKGLI 268
+++ G + ETSA Q ++D FL NV G+I
Sbjct: 137 AFARCNGLMFMETSAKTSQNVDDAFLQTAALIYDNVQLGMI 177
>gi|296421108|ref|XP_002840108.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636320|emb|CAZ84299.1| unnamed protein product [Tuber melanosporum]
Length = 233
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 105/178 (58%), Gaps = 25/178 (14%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS+VVRY+ F + TIGASF K+ + ++ V+LQ+WDTAGQER+RS++ +Y
Sbjct: 14 GVGKTSLVVRYVNNTFDPASASTIGASFLAKKVIIDDSLVRLQIWDTAGQERYRSISKLY 73
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+AN +L +DIT SF A+ +W+ ELK+NV+ +++ +VG K DL ++ RE F
Sbjct: 74 YRSANCGILCYDITSLASFEAMHSWLLELKKNVNGNIIIHIVGTKADLVNAEPSRREVPF 133
Query: 236 ---------HYSKSIG----------------GTYYETSALQDQGIEDVFLNVSKGLI 268
H S+ G +E SA DQG+++VF +++ L+
Sbjct: 134 ERCVSYAAEHLSEEEGFAIGGGGGGGRGWGGMDCCHEISARDDQGVDEVFQVIARKLV 191
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS+VVRY+ F + TIGASF K+ + ++ V+LQ+
Sbjct: 14 GVGKTSLVVRYVNNTFDPASASTIGASFLAKKVIIDDSLVRLQI 57
>gi|111305025|gb|AAI20092.1| RAB25, member RAS oncogene family [Bos taurus]
Length = 213
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G +K Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL SREV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVPTEEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>gi|62988286|ref|NP_001017936.1| ras-related protein Rab-25 [Bos taurus]
gi|75069882|sp|Q58DW6.1|RAB25_BOVIN RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|61552966|gb|AAX46328.1| RAB25 [Bos taurus]
gi|296489661|tpg|DAA31774.1| TPA: ras-related protein Rab-25 [Bos taurus]
Length = 213
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G +K Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL SREV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVPTEEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>gi|330846456|ref|XP_003295044.1| Rab GTPase [Dictyostelium purpureum]
gi|325074347|gb|EGC28427.1| Rab GTPase [Dictyostelium purpureum]
Length = 199
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 95/152 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F + + + VK ++WDTAGQER+ ++APMY
Sbjct: 19 AVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEIWDTAGQERYHTLAPMY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DI SF WVKEL+R +V+ + GNK DL + R+V EA
Sbjct: 79 YRGAQAAIVVYDIRSEDSFERAIKWVKELQRQGSPNIVIALAGNKLDLAAKRKVETAEAQ 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA Q + ++F+ ++K L
Sbjct: 139 QYAEENGLLFMETSAKTSQNVNELFVEIAKKL 170
>gi|145495635|ref|XP_001433810.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831504|emb|CAI39318.1| rab_B65 [Paramecium tetraurelia]
gi|124400930|emb|CAK66413.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ M++RY F+++ TIG F T I +GE+ VKLQ+WDTAGQ+RFR++ Y
Sbjct: 29 GVGKSCMLMRYSENQFTNNFYNTIGVDFKTKTIALGEHNVKLQIWDTAGQDRFRTITCSY 88
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ++V+DIT SF +KTW+ E+ + E + +VGNK D+ REV+ EE
Sbjct: 89 YRGAQGIIIVYDITDRESFENVKTWMAEIDKYASESVNRLLVGNKADITERREVSYEEGL 148
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
S+ +YETSA IE F +++K ++
Sbjct: 149 ELSRLYQIPFYETSAKSSTNIEAAFTHITKNIL 181
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK+ M++RY F+++ TIG F T I +GE+ VKLQ+
Sbjct: 29 GVGKSCMLMRYSENQFTNNFYNTIGVDFKTKTIALGEHNVKLQI 72
>gi|123457480|ref|XP_001316467.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121899174|gb|EAY04244.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 198
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 94/144 (65%), Gaps = 1/144 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+ RY+ F+ T+ A+F + + + L +WDTAGQE +R++ P YY
Sbjct: 16 VGKTSIATRYVNGDFNESYKGTVAANFLHKLVEINDYSCDLAIWDTAGQEIYRTLTPNYY 75
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R+AN A++VFDIT ++F +K+W+ E+K NV + +++ VVGNK DLE++R V+ +EA
Sbjct: 76 RDANIAIIVFDITSMNTFKQVKSWINEVKTNV-QDIIIMVVGNKHDLEANRAVSMDEANE 134
Query: 237 YSKSIGGTYYETSALQDQGIEDVF 260
+S G Y ETSAL GI+ VF
Sbjct: 135 LCQSFGVEYVETSALTGYGIDIVF 158
>gi|156839424|ref|XP_001643403.1| hypothetical protein Kpol_1042p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156114012|gb|EDO15545.1| hypothetical protein Kpol_1042p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 214
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 113/187 (60%), Gaps = 6/187 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ R++ F H TIG F + + + + ++LQ+WDTAGQERFRS+ P Y
Sbjct: 20 GVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREEA 234
R++ A++V+DIT+ SF I W++++K E ++LCVVGNK+DL R+V+ E+
Sbjct: 80 IRDSRVAIVVYDITKKKSFDCIDKWIEDVKNERGEDNVILCVVGNKSDLTDERQVSTEDG 139
Query: 235 FHYSKSIGGT-YYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
+K +G + ETS ++++F ++K L E ++ S + +++N +
Sbjct: 140 EKKAKELGAKIFMETSTKAGYNVKNLFKKIAKSL----PEFQNSESTPLDETENSDNTKK 195
Query: 294 RGVVEIT 300
G+++IT
Sbjct: 196 TGIIDIT 202
>gi|320593406|gb|EFX05815.1| rab GTPase vps21 [Grosmannia clavigera kw1407]
Length = 240
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 98/173 (56%), Gaps = 21/173 (12%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++WDTAGQERF S+APMY
Sbjct: 21 AVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS--------- 226
YRNA AAL+V+D+T+ S K WV EL+R +V+ +VGNK DL S
Sbjct: 81 YRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTDSGGAATPNPD 140
Query: 227 ------------REVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
R+V+ EEA Y+ ++ETSA + +VF ++ +
Sbjct: 141 AEAGDEAESTDARKVSTEEARTYADEESLLFFETSAKTGTNVAEVFTAIANAI 193
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++
Sbjct: 21 AVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEI 64
>gi|164518908|ref|NP_001101157.2| ras-related protein Rab-25 [Rattus norvegicus]
gi|149048128|gb|EDM00704.1| RAB25, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
gi|197246783|gb|AAI68745.1| RAB25, member RAS oncogene family [Rattus norvegicus]
Length = 213
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAC 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>gi|238577909|ref|XP_002388536.1| hypothetical protein MPER_12432 [Moniliophthora perniciosa FA553]
gi|215449908|gb|EEB89466.1| hypothetical protein MPER_12432 [Moniliophthora perniciosa FA553]
Length = 243
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 101/153 (66%), Gaps = 3/153 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER++ APM
Sbjct: 55 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDGTTVKFEIWDTAGQERYK--APM 112
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYRNAN A++V+DITQ S + W++EL+R D +V+ + GNK+DL + R+V EEA
Sbjct: 113 YYRNANCAVVVYDITQSASLEKARNWIRELQRQADPSIVIALCGNKSDLAARRQVTEEEA 172
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA +G+ D+F ++K L
Sbjct: 173 KKYAEEEGLMWGETSAKTGEGVSDIFTAIAKKL 205
>gi|303279212|ref|XP_003058899.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460059|gb|EEH57354.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 195
Score = 132 bits (333), Expect = 4e-28, Method: Composition-based stats.
Identities = 62/154 (40%), Positives = 94/154 (61%), Gaps = 1/154 (0%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F + TIGA+F T + V + VK ++WDTAGQER+ S+APM
Sbjct: 14 MGAGKSSLVLRFVKGQFFDYQESTIGAAFLTQCVAVNDATVKFEIWDTAGQERYHSLAPM 73
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DI+ SFA K+WVKEL+R + LV+ + GNK DL + +
Sbjct: 74 YYRGAAAAIIVYDISSQSSFARAKSWVKELQRQGNASLVMALAGNKADLSAEKREVEASE 133
Query: 235 FHYSKSIGGTYY-ETSALQDQGIEDVFLNVSKGL 267
G ++ ETSA + D+F +++ L
Sbjct: 134 AEAYAEENGLFFMETSAKTAANVNDLFYEIARKL 167
>gi|66824005|ref|XP_645357.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|75014117|sp|Q86JP3.1|RAB5A_DICDI RecName: Full=Ras-related protein Rab-5A
gi|60473482|gb|EAL71426.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 201
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 95/152 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F + + + VK ++WDTAGQER+ ++APMY
Sbjct: 19 AVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEIWDTAGQERYHTLAPMY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DI SF WVKEL+R +V+ + GNK DL + R+V EA
Sbjct: 79 YRGAQAAIVVYDIRSEDSFERAIKWVKELQRQGSPNIVIALAGNKLDLAAKRKVETAEAQ 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++ G + ETSA Q + ++F+ ++K L
Sbjct: 139 QYAEENGLLFMETSAKTSQNVNELFVEIAKKL 170
>gi|323448828|gb|EGB04722.1| hypothetical protein AURANDRAFT_38887 [Aureococcus anophagefferens]
Length = 199
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 109/187 (58%), Gaps = 13/187 (6%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV------GENKVKLQVWDTAGQERFRS 170
GKTS+ R+ SPTIGASF ++ V G + V LQ+WDTAGQERFRS
Sbjct: 13 AGKTSLSERFCYGDSPMSASPTIGASFLQKRVYVQDEHGGGTHNVALQLWDTAGQERFRS 72
Query: 171 MAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVN 230
MAPMYYR A AA++VFD ++ ++ AIKTW K+L + +++ V GNK D+ ++ +
Sbjct: 73 MAPMYYRGATAAIIVFDSSKEFAWDAIKTWQKDLLTYAEPGVIIGVAGNKMDMPNAPGFD 132
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSK--GLICLSQESLHTSSLRVYDSDNI 288
+ G + + TSAL +G++D+FL V+K I +Q+ H SL V SDNI
Sbjct: 133 LDACRTICADWGASLHLTSALTGEGVDDLFLTVAKRSASIVAAQQK-HADSLHVTASDNI 191
Query: 289 TSANPRG 295
P+G
Sbjct: 192 ----PKG 194
>gi|320581319|gb|EFW95540.1| Rab5-like GTPase [Ogataea parapolymorpha DL-1]
Length = 211
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 96/160 (60%), Gaps = 10/160 (6%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T + +G +K ++WDTAGQERF ++AP+Y
Sbjct: 16 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQRCTIGTKTIKFEIWDTAGQERFANLAPLY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----------ES 225
YRNA AAL+V+D+T+ SF + WVKEL + +V+ +VGNK DL E
Sbjct: 76 YRNAQAALVVYDVTKPASFIKARHWVKELHEQASKNIVIALVGNKYDLVVDSETGEEIEG 135
Query: 226 SREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
R V+ EE + G ++ETSA + +VF + K
Sbjct: 136 RRSVSVEEGKALADEEGLLFFETSAKTAFNVNEVFTAIGK 175
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T + +G +K ++
Sbjct: 16 AVGKSSLVLRFVSNDFQENKEPTIGAAFLTQRCTIGTKTIKFEI 59
>gi|146096690|ref|XP_001467894.1| putative ras-related protein rab-2a [Leishmania infantum JPCM5]
gi|398020934|ref|XP_003863630.1| ras-related protein rab-2a, putative [Leishmania donovani]
gi|134072260|emb|CAM70965.1| putative ras-related protein rab-2a [Leishmania infantum JPCM5]
gi|322501863|emb|CBZ36946.1| ras-related protein rab-2a, putative [Leishmania donovani]
Length = 211
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 100/161 (62%), Gaps = 8/161 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F I++ VKLQ+WDTAGQE FRS+ Y
Sbjct: 17 GVGKSCLLLQFTDKRFEPLHDLTIGVEFGARLISIQGKSVKLQIWDTAGQESFRSITRSY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A+ ALLV+D+T+ +F +++W+++ K N + LV+ ++GNK DLES R+V+REE
Sbjct: 77 YRGASGALLVYDVTRRDTFTHLQSWLEDAKANANTALVIMLIGNKCDLESKRQVSREEGE 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFL--------NVSKGLI 268
+++ G + ETSA Q ++D FL NV G+I
Sbjct: 137 AFARCNGLMFMETSAKTSQNVDDAFLQTAALIYDNVQLGMI 177
>gi|255550050|ref|XP_002516076.1| protein with unknown function [Ricinus communis]
gi|223544981|gb|EEF46496.1| protein with unknown function [Ricinus communis]
Length = 161
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 83/118 (70%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GKTS+V+R++ F H PTIGA+FFT +++ E VK +WDTAGQER+ S+APM
Sbjct: 19 VGTGKTSLVLRFVKGQFFDHQEPTIGAAFFTQILSLAEATVKFDIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNRE 232
YYR A AAL+V+DI+ +F + WV+EL+R + LV+ +V NK DL+S REV E
Sbjct: 79 YYRGAAAALVVYDISSMDTFIRAQKWVQELQRQGNPNLVMALVANKFDLDSKREVQNE 136
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
+G GKTS+V+R++ F H PTIGA+FFT +++ E VK +
Sbjct: 19 VGTGKTSLVLRFVKGQFFDHQEPTIGAAFFTQILSLAEATVKFDI 63
>gi|21634443|gb|AAM69362.1|AF274025_1 GTP-binding protein Rab25 [Homo sapiens]
Length = 217
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 26 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 85
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 86 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAR 145
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 146 MFAENNGLLFLETSALDSTNVELAFETVLK 175
>gi|406693962|gb|EKC97301.1| GTPase [Trichosporon asahii var. asahii CBS 8904]
Length = 241
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 105/176 (59%), Gaps = 27/176 (15%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-----VKLQVWDTAGQERFRS 170
VGK+S+V+R++ F+ + SPTIGA+F T + ++ E + VK ++WDTAGQERF S
Sbjct: 20 AVGKSSLVLRFVQNDFNENTSPTIGAAFLT-QTDLPECRLENRVVKFEIWDTAGQERFHS 78
Query: 171 MAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL------- 223
+APMYYRNA AA++V+DIT+ S K WVKEL+R + +V+ +VGNK DL
Sbjct: 79 LAPMYYRNAAAAVVVYDITKAASLEKAKAWVKELQRQANPNIVIALVGNKLDLVEGSSAS 138
Query: 224 --------------ESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
E++R+V EA Y+ G ++E SA +++VF ++K
Sbjct: 139 ESADAEADTPADDEETARQVPTSEAQAYATESGLLFFEASAKTGTNVQEVFTEIAK 194
>gi|302654746|ref|XP_003019172.1| hypothetical protein TRV_06778 [Trichophyton verrucosum HKI 0517]
gi|291182879|gb|EFE38527.1| hypothetical protein TRV_06778 [Trichophyton verrucosum HKI 0517]
Length = 211
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 117/193 (60%), Gaps = 17/193 (8%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMY 175
+GK+S+V+R++ F + TIGA+F T I++ E VK ++WDTAGQER++S+APMY
Sbjct: 22 LGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDETTTVKFEIWDTAGQERYKSLAPMY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL--ES--SREVNR 231
YRNAN A++V+DITQ S K+WVKEL+R +E +++ + GNK DL ES R +
Sbjct: 82 YRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLDLVNESPDKRAIET 141
Query: 232 EEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSA 291
+A Y+K G ++ETSA + ++F ++K L + +LR A
Sbjct: 142 ADAAAYAKEAGLLFFETSAKTSTNVRELFTAIAKK---LPLDQAGPRNLR---------A 189
Query: 292 NPRGVVEITPLSS 304
NPR V++ P S+
Sbjct: 190 NPRPGVDLRPESA 202
>gi|116812567|ref|NP_065120.2| ras-related protein Rab-25 [Homo sapiens]
gi|109017309|ref|XP_001116371.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Macaca mulatta]
gi|114560206|ref|XP_001163533.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Pan troglodytes]
gi|332220700|ref|XP_003259492.1| PREDICTED: ras-related protein Rab-25 [Nomascus leucogenys]
gi|397500869|ref|XP_003821127.1| PREDICTED: ras-related protein Rab-25 [Pan paniscus]
gi|402856560|ref|XP_003892855.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Papio anubis]
gi|402856562|ref|XP_003892856.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Papio anubis]
gi|426332033|ref|XP_004026997.1| PREDICTED: ras-related protein Rab-25 [Gorilla gorilla gorilla]
gi|46577696|sp|P57735.2|RAB25_HUMAN RecName: Full=Ras-related protein Rab-25; AltName: Full=CATX-8;
Flags: Precursor
gi|14602627|gb|AAH09831.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|23273871|gb|AAH33322.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|119573388|gb|EAW53003.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|190689945|gb|ACE86747.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|190691317|gb|ACE87433.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|261858756|dbj|BAI45900.1| RAB25, member RAS oncogene family [synthetic construct]
gi|312153252|gb|ADQ33138.1| RAB25, member RAS oncogene family [synthetic construct]
gi|355558553|gb|EHH15333.1| hypothetical protein EGK_01407 [Macaca mulatta]
gi|355745732|gb|EHH50357.1| hypothetical protein EGM_01173 [Macaca fascicularis]
Length = 213
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>gi|403214773|emb|CCK69273.1| hypothetical protein KNAG_0C01600 [Kazachstania naganishii CBS
8797]
Length = 214
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 102/173 (58%), Gaps = 12/173 (6%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-----GENKVKLQVWDTAGQERFRSM 171
VGK+S+V R++ F TIGA+F + I V E +K ++WDTAGQER++S+
Sbjct: 14 VGKSSIVHRFVKDTFDELRESTIGAAFLSQTIKVESEDQQEVVIKFEIWDTAGQERYKSL 73
Query: 172 APMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNV-DEPLVLCVVGNKTDL------E 224
APMYYRNANAAL+V+D+TQ S K WV+ELK V DE LV+ +VGNK DL E
Sbjct: 74 APMYYRNANAALVVYDVTQEDSLNKAKAWVEELKNKVGDEDLVIFLVGNKVDLCEGSDNE 133
Query: 225 SSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHT 277
R V A Y++ G + E SA G+++VF + + L +E L T
Sbjct: 134 DKRAVAATLAKQYAEDQGLMFDEVSAKTGHGVKEVFQAIGQRLYDTKKEELAT 186
>gi|149751384|ref|XP_001499799.1| PREDICTED: ras-related protein Rab-25-like [Equus caballus]
Length = 213
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>gi|224134314|ref|XP_002321789.1| predicted protein [Populus trichocarpa]
gi|222868785|gb|EEF05916.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 96/153 (62%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 19 VGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DI+ SF K WV+EL+ + +V+ + GNK DL +R+V E
Sbjct: 79 YYRGAAAAIIVYDISNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVAAEAT 138
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++ G + ETSA + D+F ++K L
Sbjct: 139 QVFAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
>gi|444719050|gb|ELW59850.1| Ras-related protein Rab-25 [Tupaia chinensis]
Length = 213
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>gi|297663252|ref|XP_002810088.1| PREDICTED: ras-related protein Rab-25 [Pongo abelii]
Length = 213
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>gi|399217553|emb|CCF74440.1| unnamed protein product [Babesia microti strain RI]
Length = 226
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 97/152 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+ + R+ +F + TIGA+F T IN+ + VK ++WDTAGQER+RS+APMY
Sbjct: 57 AVGKSCLTTRFCKDVFLDYQDSTIGAAFMTKTINLESSVVKFEIWDTAGQERYRSLAPMY 116
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A+AAL+V+DIT +F ++W+ ELK +++ + GNK DLE +R V+ E A
Sbjct: 117 YRGASAALIVYDITSADTFEQARSWINELKAVSRADVIIALAGNKVDLERNRSVDIETAQ 176
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+++K + ETSA ++++F+ ++ L
Sbjct: 177 NFAKLNNCLFMETSAKTGHNVQEMFMKIANLL 208
>gi|345570560|gb|EGX53381.1| hypothetical protein AOL_s00006g247 [Arthrobotrys oligospora ATCC
24927]
Length = 247
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 99/181 (54%), Gaps = 30/181 (16%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++WDTAGQERF S+APMYY
Sbjct: 22 VGKSSLVLRFVNDDFQENREPTIGAAFLTQKCNLPSRTIKFEIWDTAGQERFASLAPMYY 81
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESS---------- 226
RNA +AL+V+D+T+ S A K WV EL+R +V+ +VGNK DL S
Sbjct: 82 RNAQSALVVYDLTKASSLAKAKHWVAELQRQASPGIVIALVGNKLDLTSQSTGLENSMGG 141
Query: 227 --------------------REVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKG 266
R++ EA Y+ G ++ETSA +++VF ++
Sbjct: 142 LSLSAAAGDGDEEEEEEGDARQITTAEAKSYADEEGLLFFETSAKTGHNVQEVFTAIANA 201
Query: 267 L 267
+
Sbjct: 202 I 202
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++
Sbjct: 22 VGKSSLVLRFVNDDFQENREPTIGAAFLTQKCNLPSRTIKFEI 64
>gi|9789019|gb|AAF98238.1| unknown [Homo sapiens]
Length = 256
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>gi|405944797|pdb|3TSO|A Chain A, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
gi|405944798|pdb|3TSO|B Chain B, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
Length = 178
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 97/154 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 20 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 80 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAR 139
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLIC 269
++++ G + ETSAL +E F V K +
Sbjct: 140 MFAENNGLLFLETSALDSTNVELAFETVLKEIFA 173
>gi|126031605|pdb|2OIL|A Chain A, Crystal Structure Of Human Rab25 In Complex With Gdp
Length = 193
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 97/154 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 35 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 94
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 95 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAR 154
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLIC 269
++++ G + ETSAL +E F V K +
Sbjct: 155 MFAENNGLLFLETSALDSTNVELAFETVLKEIFA 188
>gi|296229146|ref|XP_002760046.1| PREDICTED: ras-related protein Rab-25 [Callithrix jacchus]
Length = 213
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>gi|224083990|ref|XP_002187600.1| PREDICTED: ras-related protein Rab-25 [Taeniopygia guttata]
Length = 213
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 100/164 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ F+H TIG F T I VG+ VK Q+WDTAG ER+R++ Y
Sbjct: 21 GVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTILVGDAVVKAQIWDTAGLERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AL+VFDIT++ ++ + W+KEL + + +V+ +VGNKTDL +REV EEA
Sbjct: 81 YRGAVGALVVFDITKHQTYDVVDRWLKELYDHAEASIVVMLVGNKTDLAQAREVPMEEAK 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSS 279
++ + G + ETSAL +E+ F + K + Q+ SS
Sbjct: 141 MFADNNGLLFVETSALDSTNVEEAFETILKEIFYKVQKQKQRSS 184
>gi|326432225|gb|EGD77795.1| Rab5c [Salpingoeca sp. ATCC 50818]
Length = 198
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 105/158 (66%), Gaps = 6/158 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINV-GENKVKLQVWDTAGQERFRSMAPM 174
GVGK+S+V+R++ F H T+GA+F + +++ ++KL++WDTAGQER+RS+APM
Sbjct: 16 GVGKSSLVLRFVRDEFRDHHEITVGAAFLSKVVDLPNSRQIKLEIWDTAGQERYRSLAPM 75
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDE----PLVLCVVGNKTDLESSREVN 230
YYR A A++VFDITQ+ SFA+ + W+KEL + +E PLV+ +VGNK D + R+VN
Sbjct: 76 YYRGAQGAIVVFDITQHDSFASAREWIKELWSHTEEDKEKPLVV-LVGNKVDKSNERQVN 134
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+ ++++ TY ETSA VF +++ L+
Sbjct: 135 PADVQAFTQANNITYMETSAKTAVNTSRVFEYIAEELV 172
>gi|260781612|ref|XP_002585899.1| hypothetical protein BRAFLDRAFT_62895 [Branchiostoma floridae]
gi|260812193|ref|XP_002600805.1| hypothetical protein BRAFLDRAFT_95095 [Branchiostoma floridae]
gi|229270964|gb|EEN41910.1| hypothetical protein BRAFLDRAFT_62895 [Branchiostoma floridae]
gi|229286095|gb|EEN56817.1| hypothetical protein BRAFLDRAFT_95095 [Branchiostoma floridae]
Length = 206
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 10/185 (5%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F ++V +KVKLQ+WDTAGQERFRS+ Y
Sbjct: 17 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVDVDGDKVKLQIWDTAGQERFRSITQSY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+A+A +LV+D+T SF + W+KE+++ ++ ++ +VGNK DL S REV E
Sbjct: 77 YRSAHALILVYDVTSRESFDCLPEWLKEIEQYANQQVITVLVGNKIDLTSQREVPPETGL 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPRG 295
++++ + E SA + + +E VF+++++ L T + R Y N + +P
Sbjct: 137 QFAQANNMAFLEASAKEAENVETVFMDLAREL---------TKNARKYLLRNTETVDPN- 186
Query: 296 VVEIT 300
+ EIT
Sbjct: 187 ITEIT 191
>gi|357454979|ref|XP_003597770.1| Ras-related protein Rab-5C [Medicago truncatula]
gi|355486818|gb|AES68021.1| Ras-related protein Rab-5C [Medicago truncatula]
Length = 229
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 100/182 (54%), Gaps = 29/182 (15%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GKTS+ +R++ F + PTIGA+FFT +++ E VK +WDTAGQER+ S+APM
Sbjct: 19 MGTGKTSLALRFVKGQFFQNQEPTIGAAFFTQILSLSEATVKFDIWDTAGQERYHSLAPM 78
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DI+ +F K WV+EL+R+ + LV+ +V NK DLE REV E
Sbjct: 79 YYRGAAAAIVVYDISSIDTFVRAKKWVQELQRHGSQKLVMALVANKCDLEPKREVETEVV 138
Query: 235 F-----------------------------HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
F +++ G Y ETSA + I ++F + +
Sbjct: 139 FKSSSHPFPLFFSNKYVSVDVFGSDVNDGEQFAQENGMFYMETSAKTAENINELFYEIGR 198
Query: 266 GL 267
L
Sbjct: 199 RL 200
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
+G GKTS+ +R++ F + PTIGA+FFT +++ E VK +
Sbjct: 19 MGTGKTSLALRFVKGQFFQNQEPTIGAAFFTQILSLSEATVKFDI 63
>gi|426216816|ref|XP_004002653.1| PREDICTED: ras-related protein Rab-25 [Ovis aries]
Length = 213
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 95/148 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G +K Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL SREV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVPTEEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
++++ G + ETSAL +E F V
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETV 169
>gi|440636052|gb|ELR05971.1| rab family, other [Geomyces destructans 20631-21]
Length = 236
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 98/172 (56%), Gaps = 20/172 (11%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++WDTAGQERF S+APMY
Sbjct: 24 AVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPSRTIKFEIWDTAGQERFASLAPMY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL------------ 223
YRNA +AL+V+D+T+ S K WV EL+R +V+ +VGNK DL
Sbjct: 84 YRNAQSALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTNEAGEESRNDD 143
Query: 224 --------ESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
SR+++ EA Y+ G ++ETSA + +VF ++ +
Sbjct: 144 GEEEDDNEGDSRKISTAEARSYADEEGLLFFETSAKLGTNVTEVFTAIANAI 195
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++
Sbjct: 24 AVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPSRTIKFEI 67
>gi|300175989|emb|CBK22206.2| unnamed protein product [Blastocystis hominis]
Length = 364
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 95/153 (62%), Gaps = 1/153 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V RY+ F + TIGA+F + I + + VK +WDTAGQER+ S+APMY
Sbjct: 24 AVGKSSIVQRYVRDQFLDNQESTIGAAFLSQTIKIDNDIVKFDIWDTAGQERYHSLAPMY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREEA 234
YR A AL+++DIT +FA K WV ELK+N P +V+ + GNK DL +REV +E A
Sbjct: 84 YRGAKGALVIYDITSRTTFARAKNWVTELKQNSGNPDMVIALAGNKCDLAMNREVPKELA 143
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+K + E SA + I+ +F +++ L
Sbjct: 144 EEYAKESNILFMEVSAKTKENIDLIFETLARRL 176
>gi|349579968|dbj|GAA25129.1| K7_Ypt6p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 215
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 111/189 (58%), Gaps = 9/189 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ R++ F H TIG F + + + + ++LQ+WDTAGQERFRS+ P Y
Sbjct: 20 GVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELK-RNVDEPLVLCVVGNKTDLESSREVNREEA 234
R++ A++V+DIT+ SF I W++++K DE ++LC+VGNK+DL R+++ EE
Sbjct: 80 IRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSDLSDERQISTEEG 139
Query: 235 FHYSKSIGGT-YYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
++ +G + ETS ++ +F ++K L S D++N SAN
Sbjct: 140 EKKAELLGAKIFMETSTKAGYNVKALFKKIAKSL-----PEFQNSESTPLDNENANSANQ 194
Query: 294 R--GVVEIT 300
GV++I+
Sbjct: 195 NKPGVIDIS 203
>gi|123471387|ref|XP_001318893.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736286|gb|AAX97472.1| small Rab GTPase RabD2 [Trichomonas vaginalis]
gi|121901664|gb|EAY06670.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 195
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 98/153 (64%), Gaps = 1/153 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ R++ +S + PTIGA+F T + V + ++L++WDTAGQE +R +APMY
Sbjct: 15 GVGKTSIINRFMTGKYSESLKPTIGAAFVTKNVVVEGHNLELRIWDTAGQEVYRGLAPMY 74
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+AN A++V+D+T S+ ++ WV ELK+N+ V+ + GNK DL R ++ A
Sbjct: 75 YRSANIAIIVYDVTNQPSYESVDYWVGELKKNLKNSSVIMICGNKADLYDDRVIHDSSAK 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVF-LNVSKGL 267
+ + G Y ETSA GI +F + +SK L
Sbjct: 135 DLAAANGALYCETSASSGTGINQLFDMTISKML 167
Score = 38.5 bits (88), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS++ R++ +S + PTIGA+F T + V + ++L++
Sbjct: 15 GVGKTSIINRFMTGKYSESLKPTIGAAFVTKNVVVEGHNLELRI 58
>gi|401400583|ref|XP_003880812.1| rab22a, member RAS oncogene family, related [Neospora caninum
Liverpool]
gi|325115224|emb|CBZ50779.1| rab22a, member RAS oncogene family, related [Neospora caninum
Liverpool]
Length = 241
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+ +VVR+ F + TIGA+F T +++G VK ++WDTAGQER+RS+APMYY
Sbjct: 54 VGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGSCIVKFEIWDTAGQERYRSLAPMYY 113
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDLESSREVNREEAF 235
R A AA++V+DI+ SF K+WV+EL+ D +V+ + GNK DL + R+V ++EA
Sbjct: 114 RGAAAAVVVYDISNRDSFQGAKSWVQELQTVNDRSNVVIALAGNKEDLGAERQVPKQEAQ 173
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y+ G + ETSA + ++F ++ L
Sbjct: 174 QYADEHGILFIETSAKTGHNVNELFYEIAAAL 205
>gi|390342568|ref|XP_003725687.1| PREDICTED: uncharacterized protein LOC762666 [Strongylocentrotus
purpuratus]
Length = 633
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 93/149 (62%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F I +G KVKLQ+WDTAGQERFRS+ Y
Sbjct: 17 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTIEIGGEKVKLQIWDTAGQERFRSITQSY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
Y +A+A +LVFD+T SF A+ +W++E+++ ++ +VGNK DL REVN E+
Sbjct: 77 YHSADALVLVFDVTSKESFNALPSWLREVEQYASPKVISVLVGNKIDLGKDREVNEEDGQ 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVS 264
++ S + ETSA + ++ +FL+++
Sbjct: 137 SFADSHSMRFLETSAKESDNVDRLFLDIA 165
>gi|344302341|gb|EGW32646.1| hypothetical protein SPAPADRAFT_61705 [Spathaspora passalidarum
NRRL Y-27907]
Length = 223
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 98/162 (60%), Gaps = 11/162 (6%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK--VKLQVWDTAGQERFRSMAPM 174
VGK+S+V R++ F TIGA+F T I + E +K ++WDTAGQER++S+APM
Sbjct: 22 VGKSSIVHRFVKNTFDELRESTIGAAFLTQTITIPETDTTIKFEIWDTAGQERYKSLAPM 81
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYRNANAAL V+DIT SF + W+KEL++ E +V+ +VGNK+DL +REV E
Sbjct: 82 YYRNANAALCVYDITSRVSFNRAQDWIKELRKQAPEGIVIALVGNKSDLSDNREVELSEV 141
Query: 235 FHY-----SKSIGG----TYYETSALQDQGIEDVFLNVSKGL 267
Y S++ GG E SA G+ +VF + + L
Sbjct: 142 EEYVEQYNSEATGGGSTIIIAECSAKTGDGVLEVFNRIGRAL 183
>gi|291397790|ref|XP_002715439.1| PREDICTED: RAB25, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 213
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>gi|410986758|ref|XP_003999676.1| PREDICTED: ras-related protein Rab-25 [Felis catus]
Length = 213
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G +K Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>gi|345802588|ref|XP_547540.3| PREDICTED: ras-related protein Rab-25 [Canis lupus familiaris]
gi|334350816|sp|E2RQ15.1|RAB25_CANFA RecName: Full=Ras-related protein Rab-25; Flags: Precursor
Length = 213
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G +K Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLHQAREVPTEEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>gi|401623893|gb|EJS41973.1| ypt53p [Saccharomyces arboricola H-6]
Length = 220
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 93/158 (58%), Gaps = 6/158 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F+ PTIGA+F T + N +K ++WDTAGQERF +APMY
Sbjct: 22 AVGKSSIVLRFVSDDFTESREPTIGAAFLTKRTTRDGNTIKFEIWDTAGQERFAPLAPMY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLES------SREV 229
YRNA AA++VFDIT HSF + WVKEL +V+ +V NK DL + V
Sbjct: 82 YRNAQAAVVVFDITNEHSFHKAEDWVKELHEKAGNDIVIALVANKMDLLNVQGTILDEAV 141
Query: 230 NREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
N EE + + G Y++ SA + I ++F V + +
Sbjct: 142 NEEEVDSFCQREGLLYFKASAKTGENIHEIFQTVGEKI 179
>gi|145493011|ref|XP_001432502.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831508|emb|CAI39319.1| rab_A65 [Paramecium tetraurelia]
gi|124399614|emb|CAK65105.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ M++RY F+++ TIG F T I +GE+ VKLQ+WDTAGQ+RFR++ Y
Sbjct: 29 GVGKSCMLMRYSENQFTNNFYNTIGVDFKTKTIALGEHNVKLQIWDTAGQDRFRTITCSY 88
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ++V+DIT SF +KTW+ E+ + E + +VGNK D+ REV+ EE
Sbjct: 89 YRGAQGIIIVYDITDRESFENVKTWMAEIDKYASESVNRLLVGNKADITERREVSYEEGL 148
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
S+ +YETSA IE F +++K ++
Sbjct: 149 ELSRLYQIPFYETSAKSSINIEAAFTHITKNIL 181
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGK+ M++RY F+++ TIG F T I +GE+ VKLQ+
Sbjct: 29 GVGKSCMLMRYSENQFTNNFYNTIGVDFKTKTIALGEHNVKLQI 72
>gi|367002862|ref|XP_003686165.1| hypothetical protein TPHA_0F02500 [Tetrapisispora phaffii CBS 4417]
gi|357524465|emb|CCE63731.1| hypothetical protein TPHA_0F02500 [Tetrapisispora phaffii CBS 4417]
Length = 215
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 97/154 (62%), Gaps = 2/154 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ R++ F H TIG F + + + + ++LQ+WDTAGQERFRS+ P Y
Sbjct: 20 GVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELK-RNVDEPLVLCVVGNKTDLESSREVNREEA 234
R++ A++V+DIT+ SF I W++++K E ++LC+VGNK+DL R+V EE
Sbjct: 80 IRDSRVAIVVYDITKKKSFEYIDKWIEDVKTERGSENVILCIVGNKSDLSDERQVTTEEG 139
Query: 235 FHYSKSIGGT-YYETSALQDQGIEDVFLNVSKGL 267
+K +G T + ETS ++++F ++K L
Sbjct: 140 EAKAKELGATIFMETSTKAGHNVKNLFKKIAKSL 173
>gi|340502771|gb|EGR29423.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 207
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 90/152 (59%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKT MV+RY F++ TIG F T + + + +KLQ+WDTAGQ+RFR++ YY
Sbjct: 20 VGKTCMVMRYCENQFTNEFYATIGVDFKTKNLQIDDKIIKLQIWDTAGQDRFRTITNNYY 79
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R AN L+V+DIT SF +K W+ E+++N E + +VGNK D R+V+ EE H
Sbjct: 80 RGANGILIVYDITDRDSFQNVKQWMYEIEKNAKENVQKILVGNKCDQNDQRQVDYEEGLH 139
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
S+ T++E SA IE F + K ++
Sbjct: 140 LSQQYNLTFFEASAKNSHNIELSFQTLVKNIV 171
>gi|410910458|ref|XP_003968707.1| PREDICTED: ras-related protein Rab-30-like [Takifugu rubripes]
Length = 203
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 19 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGEKVKLQIWDTAGQERFRSITQSY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ + +V +VGNK DL REV R+ A
Sbjct: 79 YRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVGNKIDLAEKREVVRQRAE 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+++S Y ETSA + +E +FL+++ LI
Sbjct: 139 DFAQSQSMLYLETSAKESDNVEKLFLDLACELI 171
>gi|255583461|ref|XP_002532489.1| protein with unknown function [Ricinus communis]
gi|223527788|gb|EEF29888.1| protein with unknown function [Ricinus communis]
Length = 222
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 108/176 (61%), Gaps = 4/176 (2%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK++++ R+ F PTIG F I V + +K Q+WDTAGQERFR++ Y
Sbjct: 22 AVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVADKLIKAQIWDTAGQERFRAITSSY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F +K W+ EL+ + +V+ + GNK DL +REV EE
Sbjct: 82 YRGALGALLVYDITRRATFDNVKKWLTELREYGNPEMVVVLAGNKCDLSHTREVGEEEGK 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLN-VSKGLICLSQESLHTSSLRVYDSDNITS 290
+ +++ G + ETSAL++ +E+ FL ++K SQ+SL +R+ D++NITS
Sbjct: 142 NLAETEGLCFMETSALENLNVEEAFLEMITKIHAITSQKSLE---VRLKDANNITS 194
>gi|124513178|ref|XP_001349945.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
gi|1220272|emb|CAA63652.1| small GTPase rab11 [Plasmodium falciparum 3D7]
gi|23615362|emb|CAD52353.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
Length = 216
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 107/181 (59%), Gaps = 7/181 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKV-KLQVWDTAGQERFRSMAPM 174
GVGK++++ R+ F+ TIG F T I + NK+ K Q+WDTAGQER+R++
Sbjct: 21 GVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQERYRAITSA 80
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A ALLV+DIT+ +SF I+ W+KEL+ N D +V+ +VGNK+DL+ R +N +A
Sbjct: 81 YYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSDLKHLRVINDNDA 140
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPR 294
Y+K + ETSAL+ +E F + + + Q+ T + DN+ S PR
Sbjct: 141 TQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQATKN-----DDNL-SIQPR 194
Query: 295 G 295
G
Sbjct: 195 G 195
>gi|156051994|ref|XP_001591958.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154705182|gb|EDO04921.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 241
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 110/207 (53%), Gaps = 29/207 (14%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++WDTAGQERF S+APMYY
Sbjct: 25 VGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYY 84
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLES----------- 225
RNA +AL+V+D+T+ S K WV EL+R +V+ +VGNK DL +
Sbjct: 85 RNAQSALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTNESDDSNNNLGD 144
Query: 226 ------------SREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQE 273
+R+V+ EA Y++ G ++ETSA + +VF ++ + S +
Sbjct: 145 EESAEGEDSGGDARKVSTAEAKSYAEEEGLLFFETSAKLGTNVTEVFTAIANAIPETSLK 204
Query: 274 ------SLHTSSLRVYDSDNITSANPR 294
+ SS R D + PR
Sbjct: 205 GARGPGGVQASSARGEDQSRVNLTGPR 231
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++
Sbjct: 25 VGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEI 67
>gi|254579943|ref|XP_002495957.1| ZYRO0C07062p [Zygosaccharomyces rouxii]
gi|238938848|emb|CAR27024.1| ZYRO0C07062p [Zygosaccharomyces rouxii]
Length = 214
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 113/187 (60%), Gaps = 9/187 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ R++ F H TIG F + + + + ++LQ+WDTAGQERFRS+ P Y
Sbjct: 22 GVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELK-RNVDEPLVLCVVGNKTDLESSREVNREEA 234
R++ A++V+DIT+ SF I W++++K +E ++LC+VGNK+DL R+V+ EE
Sbjct: 82 IRDSRVAIVVYDITKRKSFEFIDKWIEDVKNERGEENVILCIVGNKSDLSDERQVSTEEG 141
Query: 235 FHYSKSIGGT-YYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
+K +G + ETS ++++F ++K L QES +T V D N N
Sbjct: 142 ETKAKVLGAKIFMETSTKAGYNVKNLFKRIAKSLPEF-QESPNTG---VKDDSN---ENN 194
Query: 294 RGVVEIT 300
GV++IT
Sbjct: 195 AGVIDIT 201
>gi|1172845|sp|P46629.1|RAB25_RABIT RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|436001|gb|AAA31261.1| small GTP-binding protein, partial [Oryctolagus cuniculus]
Length = 213
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 100/163 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTS 278
++++ G + ETSAL +E F V K + + + S
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQIQNS 184
>gi|313228144|emb|CBY23294.1| unnamed protein product [Oikopleura dioica]
Length = 211
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F IN+ ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + TW+ + +++ +V+ ++GNK+DLES REV REE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLDDARQHSSSNMVIMLIGNKSDLESRREVKREEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
+++ G + ETSA G+E+ F+N ++
Sbjct: 136 AFAREHGLVFMETSAKTAAGVEEAFINTAR 165
>gi|116191911|ref|XP_001221768.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88181586|gb|EAQ89054.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 204
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 104/180 (57%), Gaps = 21/180 (11%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++WDTAGQERF S+APMYY
Sbjct: 23 VGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYY 82
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLES----------- 225
RNA AAL+V+D+T+ S K WV EL+R +V+ +VGNK DL +
Sbjct: 83 RNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTNDGAGNGGDVDA 142
Query: 226 -------SREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTS 278
+R++ EEA Y++ ++ETSA + +VF ++ + + SL T+
Sbjct: 143 GGEDSGDARKITTEEAKTYAEEESLLFFETSAKTGYNVTEVFTAIAN---AIPETSLKTA 199
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++
Sbjct: 23 VGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEI 65
>gi|195643312|gb|ACG41124.1| ras-related protein RHN1 [Zea mays]
Length = 203
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 96/154 (62%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GK+S+V+R++ F TIGA+FF+ + V + VK ++WDTAGQER+ S+APM
Sbjct: 20 VGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPM 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A AA++V+DIT S K WV+EL+ + ++ + GNK D+ +R V EEA
Sbjct: 80 YYRGAAAAIVVYDITNPASTTCTKKWVQELQAQGNPNTIVALAGNKVDMLDARHVAVEEA 139
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
Y++ G + ETSA + D+F ++K L+
Sbjct: 140 KTYAQENGLFFMETSAKTAINVNDIFYEIAKRLL 173
>gi|403297081|ref|XP_003945248.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-5B [Saimiri
boliviensis boliviensis]
Length = 342
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 93/150 (62%), Gaps = 2/150 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ +F + A+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 154 AVGKSSLVLRFVKGIFPSFL--LFIAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 211
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA++V+DIT +FA KTWVKEL+R +V+ + GNK DL + R V EEA
Sbjct: 212 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 271
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
Y+ + ETSA + D+FL + K
Sbjct: 272 AYADDNSLLFMETSAKTAMNVNDLFLAIGK 301
>gi|255728925|ref|XP_002549388.1| GTP-binding protein ypt5 [Candida tropicalis MYA-3404]
gi|240133704|gb|EER33260.1| GTP-binding protein ypt5 [Candida tropicalis MYA-3404]
Length = 207
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 101/155 (65%), Gaps = 3/155 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK--VKLQVWDTAGQERFRSMAP 173
VGK+S+V R++ F TIGA+F T I + E + +K ++WDTAGQER++S+AP
Sbjct: 22 AVGKSSIVHRFVKNSFDDLRESTIGAAFLTQSITIPETQTTIKFEIWDTAGQERYKSLAP 81
Query: 174 MYYRNANAALLVFDITQYHSFAAIKTWVKELKRN-VDEPLVLCVVGNKTDLESSREVNRE 232
MYYRN++AA++V+DIT+ S K W++EL++N ++ +++ +VGNK DL+ RE+ +
Sbjct: 82 MYYRNSHAAIVVYDITKTSSLQRAKDWIEELRKNSSNDGIIIALVGNKLDLQDEREIEQS 141
Query: 233 EAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+ Y+ +E SA +G+ D+F +++ L
Sbjct: 142 DVEEYATEQNLLSFECSAKSGEGVHDIFDAIARKL 176
>gi|398411932|ref|XP_003857299.1| hypothetical protein MYCGRDRAFT_66333 [Zymoseptoria tritici IPO323]
gi|339477184|gb|EGP92275.1| hypothetical protein MYCGRDRAFT_66333 [Zymoseptoria tritici IPO323]
Length = 252
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 100/181 (55%), Gaps = 29/181 (16%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + PTIGA+F T K + +K ++WDTAGQERF S+APMY
Sbjct: 22 AVGKSSLVLRFVSNAFQPNKEPTIGAAFLTQKCTLPNRIIKFEIWDTAGQERFASLAPMY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL------------ 223
YRNA AAL+V+DIT+ S + WV EL+R +V+ +VGNK DL
Sbjct: 82 YRNAQAALVVYDITKASSLVKARHWVAELQRQASPGIVIALVGNKLDLCEEDGEGGENST 141
Query: 224 -----------------ESSREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKG 266
++R+V++ EA Y+ G ++ETSA + + +VF ++
Sbjct: 142 GEADTEGEDTPEGEDVDAAARKVSKAEAKRYADEEGLLFFETSAKTGENVSEVFTAIANA 201
Query: 267 L 267
+
Sbjct: 202 I 202
>gi|403345507|gb|EJY72124.1| hypothetical protein OXYTRI_06879 [Oxytricha trifallax]
Length = 266
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 97/148 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+++++RY F + TIG F T I V + V+ Q+WDTAGQER+R++ Y
Sbjct: 24 GVGKSNLLLRYTKNQFKINSQSTIGVEFATRSIQVEDQFVRAQIWDTAGQERYRAITNAY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNA ALLV+DIT+Y+++ I+ W+ EL+ + + + + +VGNK+DL+S R V+ EEA
Sbjct: 84 YRNAVGALLVYDITKYNTYQNIERWITELREHAEYSISVLLVGNKSDLKSQRAVSFEEAN 143
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNV 263
Y+K+ + ETSAL +E F+ V
Sbjct: 144 AYAKNNNIHFIETSALDATNVEIAFVKV 171
>gi|66548006|ref|XP_393353.2| PREDICTED: ras-related protein Rab-21 [Apis mellifera]
Length = 222
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 103/171 (60%), Gaps = 6/171 (3%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+ +RY+ F+ T+ ASF K+ + E KV L +WDTAGQE+F ++ P+YY
Sbjct: 24 VGKTSVALRYVENKFNDRHISTLQASFLNKKLTIHEKKVNLAIWDTAGQEKFHALGPIYY 83
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R +N A++V+D+T Y +F + WV EL++ + + L + GNK DLE R V EEA
Sbjct: 84 RMSNGAIIVYDVTDYDTFLRVINWVTELRKMLGSGICLAIAGNKIDLEKDRRVYIEEAEE 143
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI----CLSQESL--HTSSLR 281
++ G ++ SA ++ IE++F ++ +I + Q+S TSS+R
Sbjct: 144 FANKAGAMHFHISAKLNENIEEMFFQLTVRMIEHADLMEQKSTLSRTSSIR 194
>gi|380488839|emb|CCF37107.1| Ras family protein [Colletotrichum higginsianum]
Length = 236
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 100/171 (58%), Gaps = 20/171 (11%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++WDTAGQERF S+APMYY
Sbjct: 24 VGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPMYY 83
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLES----------- 225
RNA AAL+V+D+T+ S K WV EL+R +V+ +VGNK DL +
Sbjct: 84 RNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTNDAESGSAGDNE 143
Query: 226 ---------SREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+R+++ EEA Y++ ++ETSA + +VF ++ +
Sbjct: 144 EADGEDSGDARKISTEEAKTYAEEESLLFFETSAKTGHNVTEVFTAIANAI 194
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+V+R++ F + PTIGA+F T K N+ +K ++
Sbjct: 24 VGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEI 66
>gi|449549704|gb|EMD40669.1| hypothetical protein CERSUDRAFT_111251 [Ceriporiopsis subvermispora
B]
Length = 377
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 85/120 (70%), Gaps = 1/120 (0%)
Query: 116 GVGKTSMVVRYIGKMFS-HHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
GVGKTS++ RY F + + T GA F T K++V KV+LQ+WDTAGQERFRSMAPM
Sbjct: 31 GVGKTSLLHRYTQNRFDPKNTTSTTGAFFVTKKVHVDGTKVRLQLWDTAGQERFRSMAPM 90
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR ANAALL++DIT SF I+ W++ELK+N L++ +VG+K DL + R+V + A
Sbjct: 91 YYRGANAALLLYDITNVSSFDDIRGWLEELKKNCSPDLIIYIVGSKADLHAYRQVTSDLA 150
>gi|380016771|ref|XP_003692346.1| PREDICTED: ras-related protein Rab-21-like [Apis florea]
Length = 222
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 103/171 (60%), Gaps = 6/171 (3%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGKTS+ +RY+ F+ T+ ASF K+ + E KV L +WDTAGQE+F ++ P+YY
Sbjct: 24 VGKTSVALRYVENKFNDRHISTLQASFLNKKLTIHEKKVNLAIWDTAGQEKFHALGPIYY 83
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R +N A++V+D+T Y +F + WV EL++ + + L + GNK DLE R V EEA
Sbjct: 84 RMSNGAIIVYDVTDYDTFLRVINWVTELRKMLGSGICLAIAGNKIDLEKDRRVYIEEAEE 143
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI----CLSQESL--HTSSLR 281
++ G ++ SA ++ IE++F ++ +I + Q+S TSS+R
Sbjct: 144 FANKAGAMHFHISAKLNENIEEMFFQLTVRMIEHADLMEQKSTLSRTSSIR 194
>gi|50306401|ref|XP_453174.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642308|emb|CAH00270.1| KLLA0D02376p [Kluyveromyces lactis]
Length = 207
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 106/172 (61%), Gaps = 9/172 (5%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK----VKLQVWDTAGQERFRSM 171
VGK+S+V R++ F + TIGA+F + I + E +K ++WDTAGQER++S+
Sbjct: 13 SVGKSSIVHRFVKDSFDEYRESTIGAAFLSQTIKLSEEYDEQVLKFEIWDTAGQERYKSL 72
Query: 172 APMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNV-DEPLVLCVVGNKTDLESSRE-- 228
APMYYRNANAAL+V+D+T+ S K WV ELK V D+ L++C+VGNK DL S RE
Sbjct: 73 APMYYRNANAALVVYDVTEPDSLPKAKLWVDELKEKVNDDKLIICLVGNKLDLVSEREST 132
Query: 229 --VNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTS 278
V+ +A +++ +++ SA + + VF ++ + L +++ + S
Sbjct: 133 SLVDEADAREFAQENNLLFHQVSAKTGENVIKVFQDIGERLYLQNKDKIQES 184
>gi|393215991|gb|EJD01482.1| hypothetical protein FOMMEDRAFT_30160 [Fomitiporia mediterranea
MF3/22]
Length = 398
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 84/119 (70%), Gaps = 1/119 (0%)
Query: 116 GVGKTSMVVRYIGKMFS-HHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
GVGKTS++ RY F + + T GA F T K+ V KV+LQ+WDTAGQERFRSMAPM
Sbjct: 33 GVGKTSLLQRYTQNKFDPRNTTSTTGAFFVTKKVYVNGLKVRLQLWDTAGQERFRSMAPM 92
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREE 233
YYR ANAALL++DIT +F A++ W++ELK+N L++ +VG+K DL +R+V +
Sbjct: 93 YYRGANAALLLYDITNAATFEAVRGWLEELKKNCPSDLIIYIVGSKADLHRTRQVTSDR 151
>gi|356520643|ref|XP_003528970.1| PREDICTED: ras-related protein RABA6b-like [Glycine max]
Length = 218
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 103/163 (63%), Gaps = 1/163 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ F PTIG F I V + +K Q+WDTAGQERFR++ Y
Sbjct: 24 GVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQIWDTAGQERFRAITSSY 83
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A A+LV+DIT+ +F + W+ EL+ E +V+ +VGNK+DL+ SR+V REE
Sbjct: 84 YRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVGNKSDLDQSRQVEREEGK 143
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLN-VSKGLICLSQESLHT 277
++++ + ETSALQ+ +++ FL ++K +SQ+SL T
Sbjct: 144 VFAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQKSLET 186
>gi|296413464|ref|XP_002836433.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630252|emb|CAZ80624.1| unnamed protein product [Tuber melanosporum]
Length = 218
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 102/159 (64%), Gaps = 7/159 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F + TIGA+F T I + E +K ++WDTAGQER++S+APM
Sbjct: 25 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDETTTIKFEIWDTAGQERYKSLAPM 84
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLE------SSRE 228
YYRNAN A++V+DITQ S K WVKEL+R +E +V+ + GNK DL S R
Sbjct: 85 YYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIVIALAGNKLDLALPTGSPSKRA 144
Query: 229 VNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
V EA Y++ G ++ETSA + ++++F ++K L
Sbjct: 145 VETAEAEAYAREAGLLFFETSAKTAENVKELFTAIAKKL 183
>gi|118379577|ref|XP_001022954.1| Ras family protein [Tetrahymena thermophila]
gi|89304721|gb|EAS02709.1| Ras family protein [Tetrahymena thermophila SB210]
Length = 1307
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 88/150 (58%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ ++ R+ FS PTIG F T I + + +K Q+WDTAGQER+R++ Y
Sbjct: 1109 GVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDKIIKAQIWDTAGQERYRAITSAY 1168
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AL+VFDIT+ SF + W KEL+ + D +V ++GNK DL R ++++ A
Sbjct: 1169 YRGAAGALIVFDITKQTSFENLAKWYKELQEHSDVQIVTMLIGNKCDLADQRNISKDAAS 1228
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
+++ Y ETSAL +E F + K
Sbjct: 1229 KFAQEYDMAYLETSALHSTNVEQAFHQIIK 1258
>gi|145484322|ref|XP_001428171.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834551|emb|CAI44580.1| rab_A05 [Paramecium tetraurelia]
gi|124395255|emb|CAK60773.1| unnamed protein product [Paramecium tetraurelia]
Length = 211
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 97/153 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ ++++ + K F TIG F I V + VKLQVWDTAGQE F+S+ Y
Sbjct: 16 GVGKSCLLLQLLDKRFRQKHEVTIGVEFGAKPIEVDDLNVKLQVWDTAGQEAFKSITRTY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+A AL+V+D+T+ SF +++TW++E ++N ++ + + +VGNKTDLES REV EE
Sbjct: 76 YRSAAGALIVYDVTKRESFNSVQTWIEEARQNGNQTMSMILVGNKTDLESMREVTTEEGK 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+K + ETSA I+D F+ +K +I
Sbjct: 136 QLAKQQNILFIETSAKTGDHIDDAFVISAKEII 168
>gi|440470816|gb|ELQ39867.1| mitochondrion protein [Magnaporthe oryzae Y34]
gi|440482453|gb|ELQ62942.1| mitochondrion protein [Magnaporthe oryzae P131]
Length = 932
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 94/147 (63%), Gaps = 6/147 (4%)
Query: 127 IGK-MFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPMYYRNANAALL 184
+GK F + TIGA+F T I++ EN VK ++WDTAGQER++S+APMYYRNAN A++
Sbjct: 30 VGKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVV 89
Query: 185 VFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVNREEAFHYSKS 240
V+DITQ S K WVKEL+R +E +++ + GNK DL R V EA Y++
Sbjct: 90 VYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVTEQPDKRAVPTSEAEAYARE 149
Query: 241 IGGTYYETSALQDQGIEDVFLNVSKGL 267
G ++ETSA + + D+F ++K L
Sbjct: 150 AGLLFFETSAKTAENVRDLFTAIAKKL 176
>gi|400602159|gb|EJP69784.1| RAB GTPase Ypt5 [Beauveria bassiana ARSEF 2860]
Length = 220
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 100/157 (63%), Gaps = 5/157 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENK-VKLQVWDTAGQERFRSMAPM 174
VGK+S+V+R++ F TIGA+F T I++ E VK ++WDTAGQER++S+APM
Sbjct: 29 AVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDETTTVKFEIWDTAGQERYKSLAPM 88
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL----ESSREVN 230
YYRNAN A++V+DITQ S K WVKEL+R +E +++ + GNK DL R +
Sbjct: 89 YYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVTEQPDKRAIP 148
Query: 231 REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
EA Y+K G ++ETSA + + D+F ++K L
Sbjct: 149 TAEAEAYAKEAGLLFFETSAKTAENVPDLFTAIAKKL 185
>gi|303272713|ref|XP_003055718.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463692|gb|EEH60970.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 219
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 101/154 (65%), Gaps = 1/154 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F H TIG F + + +GE ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQHVHDLTIGVEFGSRLVAIGEKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + +W+++ +++ + + + +VGNK+D E+SR V+ EE
Sbjct: 76 YRGAAGALLVYDITRRDTFEHLTSWLEDARQHANPNMTVTLVGNKSDAEASRVVSTEEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLIC 269
+++ G + ETSA +G+E+VF + + IC
Sbjct: 136 AFAREHGLAFLETSAQTSEGVEEVFTSTAAA-IC 168
>gi|401427135|ref|XP_003878051.1| putative ras-related protein rab-2a [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494298|emb|CBZ29597.1| putative ras-related protein rab-2a [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 211
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 100/161 (62%), Gaps = 8/161 (4%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F I++ VKLQ+WDTAGQE FRS+ Y
Sbjct: 17 GVGKSCLLLQFTDKRFEPLHDLTIGVEFGARLISIQGKSVKLQIWDTAGQESFRSITRSY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A+ ALLV+D+T+ +F +++W+++ K N + LV+ ++GNK DL+S R+V+REE
Sbjct: 77 YRGASGALLVYDVTRRDTFTHLQSWLEDAKANANTALVIMLIGNKCDLDSKRQVSREEGE 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFL--------NVSKGLI 268
+++ G + ETSA Q ++D FL NV G+I
Sbjct: 137 AFARCNGLMFMETSAKTSQNVDDAFLQTAALIYDNVQLGMI 177
>gi|343428064|emb|CBQ71588.1| related to GTP-binding protein Rab5c [Sporisorium reilianum SRZ2]
Length = 670
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 85/116 (73%), Gaps = 2/116 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISP-TIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
GVGKTS+V RY F+ +P TIGASF T K+ V KV+LQ+WDTAGQERFRSMAPM
Sbjct: 362 GVGKTSLVHRYTSGQFTIASTPSTIGASFLTKKLIVDGVKVRLQLWDTAGQERFRSMAPM 421
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDL-ESSREV 229
YYR ++AA++V+D+T SF I+ W++ELK+N+ LV+ VVG K DL S R+V
Sbjct: 422 YYRGSHAAVIVYDMTSMSSFLDIRAWIEELKKNMTTDLVMHVVGAKLDLARSQRQV 477
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 340 GVGKTSMVVRYIGKMFSHHISP-TIGASFFTAKINVGENKVKLQL 383
GVGKTS+V RY F+ +P TIGASF T K+ V KV+LQL
Sbjct: 362 GVGKTSLVHRYTSGQFTIASTPSTIGASFLTKKLIVDGVKVRLQL 406
>gi|224043682|ref|XP_002187756.1| PREDICTED: ras-related protein Rab-30 [Taeniopygia guttata]
gi|363729400|ref|XP_417213.3| PREDICTED: ras-related protein Rab-30 [Gallus gallus]
gi|449271458|gb|EMC81819.1| Ras-related protein Rab-30 [Columba livia]
Length = 203
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 19 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ ++ +VGNK DL REV+++ A
Sbjct: 79 YRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLADKREVSQQRAA 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+S++ Y ETSA + +E +FL+++ LI
Sbjct: 139 EFSEAQDMYYLETSAKESDNVEKLFLDLACRLI 171
>gi|114052070|ref|NP_001040209.1| ras-related GTP-binding protein 4b [Bombyx mori]
gi|87248395|gb|ABD36250.1| ras-related GTP-binding protein 4b [Bombyx mori]
Length = 214
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 107/201 (53%), Gaps = 7/201 (3%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
G GK+S++ +IG F TIG F + +N+G KLQ+WDTAGQERFRS+ Y
Sbjct: 18 GTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWDTAGQERFRSVTRSY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT SF A+ W+++ + +V+ +VGNK DLE SREV EA
Sbjct: 78 YRGAAGALLVYDITSRDSFNALANWLRDARTLASPNIVILLVGNKKDLEDSREVTFTEAS 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANPRG 295
++ + ETSA + +E+ FL SK ++ + T L D + I S G
Sbjct: 138 QFALENELMFLETSAKTGENVEEAFLKCSKTILA----KIETGEL---DPERIGSGIQYG 190
Query: 296 VVEITPLSSLDTPPLTEAETA 316
L++ P T +E A
Sbjct: 191 TNTTKRLTAPKRPARTPSECA 211
>gi|154343265|ref|XP_001567578.1| putative ras-related protein rab-2a [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064910|emb|CAM43019.1| putative ras-related protein rab-2a [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 212
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 97/149 (65%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F I++ VKLQ+WDTAGQE FRS+ Y
Sbjct: 17 GVGKSCLLLQFTDKRFEPLHDLTIGVEFGARLISIQGRSVKLQIWDTAGQESFRSITRSY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A+ ALLV+D+T+ +F +++W+++ K N + LV+ ++GNK DL+S R+V+REE
Sbjct: 77 YRGASGALLVYDVTRRDTFTHLQSWLEDAKANANTALVIMLIGNKCDLDSKRQVSREEGE 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVS 264
+++S G + ETSA + ++D FL +
Sbjct: 137 AFARSNGLMFMETSAKTSKNVDDAFLQTA 165
>gi|417397205|gb|JAA45636.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV +EA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTDEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>gi|194036023|ref|XP_001928392.1| PREDICTED: ras-related protein Rab-25 [Sus scrofa]
Length = 213
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV +EA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTDEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>gi|148706352|gb|EDL38299.1| RAB31, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 244
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 78/112 (69%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 25 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 84
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSR 227
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL R
Sbjct: 85 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 136
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 25 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 60
>gi|326914544|ref|XP_003203585.1| PREDICTED: ras-related protein Rab-30-like [Meleagris gallopavo]
Length = 203
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 19 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ ++ +VGNK DL REV+++ A
Sbjct: 79 YRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLADKREVSQQRAA 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+S++ Y ETSA + +E +FL+++ LI
Sbjct: 139 EFSEAQDMYYLETSAKESDNVEKLFLDLACRLI 171
>gi|323455357|gb|EGB11225.1| hypothetical protein AURANDRAFT_59866 [Aureococcus anophagefferens]
Length = 198
Score = 130 bits (328), Expect = 1e-27, Method: Composition-based stats.
Identities = 67/150 (44%), Positives = 91/150 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+ RY+ F + TIGASF + I V K Q+WDTAGQE++ S+APMY
Sbjct: 20 GVGKSSLAQRYVTNTFKPYSESTIGASFMSKMILVDGAPCKCQIWDTAGQEKYHSLAPMY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AA+LVFDIT+ S +K WV+EL+ E L L + GNK DL R V ++A
Sbjct: 80 YRGAAAAILVFDITKPASLDKLKAWVRELQTQGPERLALAIAGNKADLADRRAVPADDAK 139
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++ IG Y ETSA D + +F ++ +
Sbjct: 140 AFAADIGALYCETSAKDDTNVSQLFADLVR 169
>gi|348579815|ref|XP_003475674.1| PREDICTED: ras-related protein Rab-25-like [Cavia porcellus]
Length = 213
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G +K Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV +EA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTDEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>gi|242021638|ref|XP_002431251.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212516505|gb|EEB18513.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 211
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 92/153 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
G GK+ ++ ++I F S TIG F + +NVG VKLQ+WDTAGQERFRS+ Y
Sbjct: 16 GCGKSCLLYQFIRNQFKEDSSYTIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTKGY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT SF A+ TW+ + K +V+ +VGNK DLE REV EA
Sbjct: 76 YRGAAGALLVYDITSRDSFNALSTWLSDTKTLASPNIVMLLVGNKKDLEKEREVTFLEAS 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+++ + ETSA + +E+ FL SK ++
Sbjct: 136 KFAQENELMFLETSAKSGECVEEAFLKCSKSIL 168
>gi|449281797|gb|EMC88784.1| Ras-related protein Rab-25 [Columba livia]
Length = 213
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 100/164 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ F+H TIG F T I VG+ VK Q+WDTAG ER+R++ Y
Sbjct: 21 GVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTIMVGDAVVKAQIWDTAGLERYRAITSAY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AL+VFDIT++ ++ ++ W+KEL + + +V+ +VGNKTDL +REV EEA
Sbjct: 81 YRGAVGALVVFDITKHQTYDVVERWLKELYDHAEANIVVMLVGNKTDLAQAREVPMEEAK 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSS 279
++ + G + ETSAL +E F + K + Q+ +S
Sbjct: 141 MFADNNGLLFVETSALDSTNVEQAFETILKEIFHKVQQQKQRNS 184
>gi|397483947|ref|XP_003813150.1| PREDICTED: ras-related protein Rab-17 [Pan paniscus]
Length = 211
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 100/152 (65%), Gaps = 1/152 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+ +RY+ F I PT+G +FFT ++VG +KL++WDTAGQE++ S+ +Y+
Sbjct: 30 VGKSSLALRYVKNNFKS-ILPTVGCAFFTKVVDVGAASLKLEIWDTAGQEKYHSVCHLYF 88
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R ANAALLV+DIT+ SF + W+K+L+ + +++ +VGNKTDL REV +E
Sbjct: 89 RGANAALLVYDITRKDSFLKAQQWLKDLEEELHPEVLVMLVGNKTDLSQEREVTFQEGKE 148
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
++ S + ETSA + + +VF V++ L+
Sbjct: 149 FADSQKLLFMETSAKLNHQVSEVFNTVAQELL 180
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+ +RY+ F I PT+G +FFT ++VG +KL++
Sbjct: 30 VGKSSLALRYVKNNFKS-ILPTVGCAFFTKVVDVGAASLKLEI 71
>gi|126307642|ref|XP_001367187.1| PREDICTED: ras-related protein Rab-25-like [Monodelphis domestica]
Length = 213
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV +EA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTDEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFIETSALDSTNVELAFETVLK 171
>gi|256084269|ref|XP_002578353.1| rab-2414 [Schistosoma mansoni]
gi|360045234|emb|CCD82782.1| putative rab-2,4,14 [Schistosoma mansoni]
Length = 213
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 101/160 (63%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F IN+ + ++KLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDDKQIKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + TW+++ +++ +V+ ++GNK+DLES R+V +EE
Sbjct: 76 YRGAAGALLVYDITRRETFTHLTTWLEDARQHSSSNMVIMLIGNKSDLESRRDVQKEEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESL 275
+++ G + ETSA +ED F++ +K + QE +
Sbjct: 136 AFAREHGLIFMETSAKTAANVEDAFIDTAKCIHGKIQEGV 175
>gi|56756457|gb|AAW26401.1| SJCHGC06657 protein [Schistosoma japonicum]
Length = 213
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 106/178 (59%), Gaps = 4/178 (2%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F IN+ +VKLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLINIDGKQVKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + TW+++ +++ +V+ ++GNK+DLES R+V +EE
Sbjct: 76 YRGAAGALLVYDITRRDTFTHLTTWLEDARQHSSSNMVIMLIGNKSDLESRRDVQKEEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLICLSQESLHTSSLRVYDSDNITSANP 293
+++ G + ETSA +ED F+N +K C+ + + +L V + N P
Sbjct: 136 AFAREHGLVFMETSAKTAANVEDAFINTAK---CI-HDKIQEGALDVNNEANGIKLGP 189
>gi|307105820|gb|EFN54068.1| hypothetical protein CHLNCDRAFT_25172 [Chlorella variabilis]
Length = 167
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 98/152 (64%), Gaps = 4/152 (2%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+G GKTS+V R++ + + TIGASFFT I E VK ++WDTAGQER+ S+APM
Sbjct: 16 MGSGKTSLVQRFVRGQYFENQESTIGASFFTKTIP--EKHVKFEIWDTAGQERYHSLAPM 73
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEP-LVLCVVGNKTDL-ESSREVNRE 232
YYR A AA++V+D+T SF K WV EL++NV P L++ +VGNK DL E +R V
Sbjct: 74 YYRGAAAAIVVYDVTHPASFERAKKWVWELRQNVQNPNLIIALVGNKVDLAEEARAVPEA 133
Query: 233 EAFHYSKSIGGTYYETSALQDQGIEDVFLNVS 264
+A Y+ G ++E SA+ + + ++F V+
Sbjct: 134 DARTYAAETGLLFFEASAMTNVNVVELFDEVA 165
>gi|395328897|gb|EJF61287.1| hypothetical protein DICSQDRAFT_136853 [Dichomitus squalens
LYAD-421 SS1]
Length = 378
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
Query: 116 GVGKTSMVVRYI-GKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
GVGKTS++ RY GK + + T GA F T K+ V KV+LQ+WDTAGQERFRSMAPM
Sbjct: 30 GVGKTSLLHRYTQGKFDPKNTTSTTGAFFVTKKVTVDGTKVRLQLWDTAGQERFRSMAPM 89
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR ANAALL++DIT SF ++ W++ELK+N L++ +VG K DL R+V + A
Sbjct: 90 YYRGANAALLLYDITNASSFEDVRGWLEELKKNCSPDLIIYIVGAKADLHQFRQVTSDLA 149
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 340 GVGKTSMVVRYI-GKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS++ RY GK + + T GA F T K+ V KV+LQL
Sbjct: 30 GVGKTSLLHRYTQGKFDPKNTTSTTGAFFVTKKVTVDGTKVRLQL 74
>gi|348525384|ref|XP_003450202.1| PREDICTED: ras-related protein Rab-30-like [Oreochromis niloticus]
Length = 203
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 19 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGEKVKLQIWDTAGQERFRSITQSY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ + +V +VGNK DL REV R+ A
Sbjct: 79 YRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVGNKIDLAEKREVLRQRAE 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
++++ Y ETSA + +E +FL+++ LI
Sbjct: 139 DFAEAQSMLYLETSAKESDNVEKLFLDLACELI 171
>gi|226479810|emb|CAX73201.1| RAB2, member RAS oncogene family [Schistosoma japonicum]
Length = 213
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ +++++ K F TIG F IN+ +VKLQ+WDTAGQE FRS+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLINIDGKQVKLQIWDTAGQESFRSITRSY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT+ +F + TW+++ +++ +V+ ++GNK+DLES R+V +EE
Sbjct: 76 YRGAAGALLVYDITRRDTFTHLTTWLEDARQHSSSNMVIMLIGNKSDLESRRDVQKEEGE 135
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
+++ G + ETSA +ED F+N +K
Sbjct: 136 AFAREHGLVFMETSAKTAANVEDAFINTAK 165
>gi|344293727|ref|XP_003418572.1| PREDICTED: ras-related protein Rab-30-like [Loxodonta africana]
Length = 205
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 21 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSY 80
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ ++ +VGNK DL REV+++ A
Sbjct: 81 YRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAE 140
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+S++ Y ETSA + +E +FL+++ LI
Sbjct: 141 EFSEAQDMYYLETSAKESDNVEKLFLDLACRLI 173
>gi|444320471|ref|XP_004180892.1| hypothetical protein TBLA_0E03190 [Tetrapisispora blattae CBS 6284]
gi|387513935|emb|CCH61373.1| hypothetical protein TBLA_0E03190 [Tetrapisispora blattae CBS 6284]
Length = 207
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 99/154 (64%), Gaps = 2/154 (1%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKTS++ R++ F H TIG F + + + + ++LQ+WDTAGQERFRS+ P Y
Sbjct: 18 GVGKTSLITRFMYDTFDEHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELK-RNVDEPLVLCVVGNKTDLESSREVNREEA 234
R++ A++V+DIT+ SF I W++++K D+ ++LC+VGNK+DL R+V+ EE
Sbjct: 78 IRDSRVAIVVYDITKKKSFEYIDKWIQDVKNERGDDGVILCIVGNKSDLSDQRQVSNEEG 137
Query: 235 FHYSKSIGGT-YYETSALQDQGIEDVFLNVSKGL 267
+ +K +G + ETS ++++F ++K L
Sbjct: 138 ENKAKLLGADIFMETSTKAGYNVKNLFKKIAKSL 171
>gi|327269229|ref|XP_003219397.1| PREDICTED: ras-related protein Rab-30-like [Anolis carolinensis]
Length = 203
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 19 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ ++ +VGNK DL REV+++ A
Sbjct: 79 YRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLADKREVSQQRAE 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+S++ Y ETSA + +E +FL+++ LI
Sbjct: 139 EFSEAQDMYYLETSAKESDNVEKLFLDLACRLI 171
>gi|403369641|gb|EJY84670.1| Rab31 protein [Oxytricha trifallax]
Length = 180
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 91/148 (61%)
Query: 118 GKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYYR 177
GK+S + RYI FS I TIG F + ++V + +KLQ+WDTAGQER+RS++ YYR
Sbjct: 18 GKSSALRRYINDSFSIDIKQTIGGEFASKSLDVNDKNIKLQIWDTAGQERYRSLSKFYYR 77
Query: 178 NANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFHY 237
AN + V+DIT +F ++ +V K +D+ +L V GNK+DL R+V+ EE Y
Sbjct: 78 KANIIIFVYDITNRETFTKLQEFVNHAKECLDDNYILTVAGNKSDLIKQRQVSFEEGMSY 137
Query: 238 SKSIGGTYYETSALQDQGIEDVFLNVSK 265
+ IG ++YE SA ++ +F + +K
Sbjct: 138 ASEIGASFYEISAFTGNSVDTLFNDSAK 165
>gi|332815792|ref|XP_003309588.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-17 [Pan
troglodytes]
Length = 211
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 100/152 (65%), Gaps = 1/152 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+ +RY+ F I PT+G +FFT ++VG +KL++WDTAGQE++ S+ +Y+
Sbjct: 30 VGKSSLALRYVKNDFKS-ILPTVGCAFFTKVVDVGAASLKLEIWDTAGQEKYHSVCHLYF 88
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R ANAALLV+DIT+ SF + W+K+L+ + +++ +VGNKTDL REV +E
Sbjct: 89 RGANAALLVYDITRKDSFLKAQQWLKDLEEELHPEVLVMLVGNKTDLSQEREVTFQEGKE 148
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
++ S + ETSA + + +VF V++ L+
Sbjct: 149 FADSQKLLFMETSAKLNHQVSEVFNTVAQELL 180
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+ +RY+ F I PT+G +FFT ++VG +KL++
Sbjct: 30 VGKSSLALRYVKNDFKS-ILPTVGCAFFTKVVDVGAASLKLEI 71
>gi|340380301|ref|XP_003388661.1| PREDICTED: ras-related protein Rab-22A-like [Amphimedon
queenslandica]
Length = 128
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 81/115 (70%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+GVGKTS+V R++ FS +I+ T+GASF + + V + +K Q+WDTAGQER+RS+ PM
Sbjct: 14 VGVGKTSLVGRFVHDTFSQNITTTLGASFMSKSLTVDNSTIKFQIWDTAGQERYRSLLPM 73
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREV 229
YYRNA AA++V+DIT SF ++ W+ EL R +VL + GNK DLE REV
Sbjct: 74 YYRNAAAAIVVYDITNEGSFTVLQDWIAELHRLGPPNIVLAIAGNKCDLEDKREV 128
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 339 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
+GVGKTS+V R++ FS +I+ T+GASF + + V + +K Q+
Sbjct: 14 VGVGKTSLVGRFVHDTFSQNITTTLGASFMSKSLTVDNSTIKFQI 58
>gi|384499462|gb|EIE89953.1| hypothetical protein RO3G_14664 [Rhizopus delemar RA 99-880]
Length = 193
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 92/152 (60%), Gaps = 4/152 (2%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S++ +Y+ F TIGA+F ++ + +K +WDTAGQERFRS+APMY
Sbjct: 23 SVGKSSIITKYVTDTFIEGREVTIGAAFLAKICSIEDRIIKFDIWDTAGQERFRSLAPMY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YRNA AA++VFD+T Y+SF K WV EL +V ++ +VGNK DLE R+V+ +E
Sbjct: 83 YRNAAAAMIVFDVTNYNSFTGAKRWVDELPLDV----MIALVGNKIDLEQDRQVSVDEIK 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y Y ETSA I VF ++K +
Sbjct: 139 EYVAEKDLIYIETSARLGINIHHVFNEIAKNV 170
>gi|109131470|ref|XP_001086669.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Macaca mulatta]
gi|355704975|gb|EHH30900.1| hypothetical protein EGK_20720 [Macaca mulatta]
gi|355757526|gb|EHH61051.1| hypothetical protein EGM_18978 [Macaca fascicularis]
Length = 215
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 93/152 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F TIGA+F T + + + VK ++ DTAGQER+ S+APMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIRDTAGQERYHSLAPMY 89
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A A ++V+DIT SFA K WVKEL+R V+ + GNK +L + R VN +EA
Sbjct: 90 YRGAQAVIVVYDITNEESFARAKNWVKELQRQASPNTVIALAGNKANLANKRAVNFQEAQ 149
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
++ + ETSA + ++F+ ++K L
Sbjct: 150 SFADDNSLLFMETSAKTSMDVNEIFMAIAKKL 181
>gi|21361418|ref|NP_055303.2| ras-related protein Rab-30 [Homo sapiens]
gi|31560778|ref|NP_083770.2| ras-related protein Rab-30 [Mus musculus]
gi|115495465|ref|NP_001069697.1| ras-related protein Rab-30 [Bos taurus]
gi|386780907|ref|NP_001248052.1| ras-related protein Rab-30 [Macaca mulatta]
gi|57102328|ref|XP_533993.1| PREDICTED: ras-related protein Rab-30 [Canis lupus familiaris]
gi|114639563|ref|XP_001175176.1| PREDICTED: ras-related protein Rab-30 isoform 7 [Pan troglodytes]
gi|114639565|ref|XP_001175173.1| PREDICTED: ras-related protein Rab-30 isoform 5 [Pan troglodytes]
gi|114639567|ref|XP_001175175.1| PREDICTED: ras-related protein Rab-30 isoform 6 [Pan troglodytes]
gi|114639569|ref|XP_001175170.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Pan troglodytes]
gi|114639571|ref|XP_001175166.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Pan troglodytes]
gi|149719267|ref|XP_001492126.1| PREDICTED: ras-related protein Rab-30-like [Equus caballus]
gi|291384169|ref|XP_002708711.1| PREDICTED: RAB30, member RAS oncogene family [Oryctolagus
cuniculus]
gi|296216937|ref|XP_002754790.1| PREDICTED: ras-related protein Rab-30-like isoform 1 [Callithrix
jacchus]
gi|296216939|ref|XP_002754791.1| PREDICTED: ras-related protein Rab-30-like isoform 2 [Callithrix
jacchus]
gi|296216941|ref|XP_002754792.1| PREDICTED: ras-related protein Rab-30-like isoform 3 [Callithrix
jacchus]
gi|297689849|ref|XP_002822348.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Pongo abelii]
gi|297689851|ref|XP_002822349.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Pongo abelii]
gi|297689853|ref|XP_002822350.1| PREDICTED: ras-related protein Rab-30 isoform 4 [Pongo abelii]
gi|301780042|ref|XP_002925436.1| PREDICTED: ras-related protein Rab-30-like [Ailuropoda melanoleuca]
gi|332211163|ref|XP_003254688.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Nomascus
leucogenys]
gi|332211165|ref|XP_003254689.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Nomascus
leucogenys]
gi|332211167|ref|XP_003254690.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Nomascus
leucogenys]
gi|332211169|ref|XP_003254691.1| PREDICTED: ras-related protein Rab-30 isoform 4 [Nomascus
leucogenys]
gi|348565559|ref|XP_003468570.1| PREDICTED: ras-related protein Rab-30-like [Cavia porcellus]
gi|354489829|ref|XP_003507063.1| PREDICTED: ras-related protein Rab-30-like [Cricetulus griseus]
gi|395743310|ref|XP_003777901.1| PREDICTED: ras-related protein Rab-30 [Pongo abelii]
gi|395814755|ref|XP_003780907.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Otolemur
garnettii]
gi|395814757|ref|XP_003780908.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Otolemur
garnettii]
gi|397502808|ref|XP_003822035.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Pan paniscus]
gi|397502810|ref|XP_003822036.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Pan paniscus]
gi|397502812|ref|XP_003822037.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Pan paniscus]
gi|397502814|ref|XP_003822038.1| PREDICTED: ras-related protein Rab-30 isoform 4 [Pan paniscus]
gi|397502816|ref|XP_003822039.1| PREDICTED: ras-related protein Rab-30 isoform 5 [Pan paniscus]
gi|402894802|ref|XP_003910534.1| PREDICTED: ras-related protein Rab-30 [Papio anubis]
gi|403287762|ref|XP_003935099.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403287764|ref|XP_003935100.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Saimiri
boliviensis boliviensis]
gi|403287766|ref|XP_003935101.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Saimiri
boliviensis boliviensis]
gi|410972563|ref|XP_003992728.1| PREDICTED: ras-related protein Rab-30 [Felis catus]
gi|426251519|ref|XP_004019469.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Ovis aries]
gi|426251521|ref|XP_004019470.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Ovis aries]
gi|426369956|ref|XP_004051946.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Gorilla gorilla
gorilla]
gi|426369958|ref|XP_004051947.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Gorilla gorilla
gorilla]
gi|426369960|ref|XP_004051948.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Gorilla gorilla
gorilla]
gi|426369962|ref|XP_004051949.1| PREDICTED: ras-related protein Rab-30 isoform 4 [Gorilla gorilla
gorilla]
gi|426369964|ref|XP_004051950.1| PREDICTED: ras-related protein Rab-30 isoform 5 [Gorilla gorilla
gorilla]
gi|441645341|ref|XP_004090651.1| PREDICTED: ras-related protein Rab-30 [Nomascus leucogenys]
gi|38258937|sp|Q15771.2|RAB30_HUMAN RecName: Full=Ras-related protein Rab-30; Flags: Precursor
gi|68652043|sp|Q923S9.1|RAB30_MOUSE RecName: Full=Ras-related protein Rab-30; Flags: Precursor
gi|116255980|sp|Q17QB7.1|RAB30_BOVIN RecName: Full=Ras-related protein Rab-30; Flags: Precursor
gi|15277920|gb|AAK94019.1|AF399756_1 RAB30 [Mus musculus]
gi|20379088|gb|AAM21104.1|AF498956_1 small GTP binding protein RAB30 [Homo sapiens]
gi|15559714|gb|AAH14213.1| RAB30, member RAS oncogene family [Homo sapiens]
gi|17028460|gb|AAH17550.1| RAB30, member RAS oncogene family [Mus musculus]
gi|49457208|emb|CAG46903.1| RAB30 [Homo sapiens]
gi|60814713|gb|AAX36314.1| RAB30 member RAS oncogene family [synthetic construct]
gi|74209184|dbj|BAE24976.1| unnamed protein product [Mus musculus]
gi|109659234|gb|AAI18449.1| RAB30, member RAS oncogene family [Bos taurus]
gi|112293021|dbj|BAF02888.1| Rab30 [Mus musculus]
gi|119595484|gb|EAW75078.1| RAB30, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595485|gb|EAW75079.1| RAB30, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595486|gb|EAW75080.1| RAB30, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595487|gb|EAW75081.1| RAB30, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123984423|gb|ABM83557.1| RAB30, member RAS oncogene family [synthetic construct]
gi|123998391|gb|ABM86797.1| RAB30, member RAS oncogene family [synthetic construct]
gi|148674775|gb|EDL06722.1| RAB30, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148674776|gb|EDL06723.1| RAB30, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149068963|gb|EDM18515.1| RAB30, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149068964|gb|EDM18516.1| RAB30, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|157928438|gb|ABW03515.1| RAB30, member RAS oncogene family [synthetic construct]
gi|158256188|dbj|BAF84065.1| unnamed protein product [Homo sapiens]
gi|189065406|dbj|BAG35245.1| unnamed protein product [Homo sapiens]
gi|261860434|dbj|BAI46739.1| RAB30, member RAS oncogene family [synthetic construct]
gi|281339635|gb|EFB15219.1| hypothetical protein PANDA_014945 [Ailuropoda melanoleuca]
gi|296471922|tpg|DAA14037.1| TPA: RAB30, member RAS oncogene family [Bos taurus]
gi|335773338|gb|AEH58359.1| Ras-related protein Rab-30-like protein [Equus caballus]
gi|351696042|gb|EHA98960.1| Ras-related protein Rab-30 [Heterocephalus glaber]
gi|355566910|gb|EHH23289.1| hypothetical protein EGK_06727 [Macaca mulatta]
gi|355752502|gb|EHH56622.1| hypothetical protein EGM_06073 [Macaca fascicularis]
gi|380811820|gb|AFE77785.1| ras-related protein Rab-30 [Macaca mulatta]
gi|384946490|gb|AFI36850.1| ras-related protein Rab-30 [Macaca mulatta]
gi|410206854|gb|JAA00646.1| RAB30, member RAS oncogene family [Pan troglodytes]
gi|410254834|gb|JAA15384.1| RAB30, member RAS oncogene family [Pan troglodytes]
gi|410290492|gb|JAA23846.1| RAB30, member RAS oncogene family [Pan troglodytes]
gi|410329963|gb|JAA33928.1| RAB30, member RAS oncogene family [Pan troglodytes]
gi|417397027|gb|JAA45547.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
gi|431838480|gb|ELK00412.1| Ras-related protein Rab-30 [Pteropus alecto]
gi|440906949|gb|ELR57158.1| Ras-related protein Rab-30 [Bos grunniens mutus]
Length = 203
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 19 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ ++ +VGNK DL REV+++ A
Sbjct: 79 YRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAE 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+S++ Y ETSA + +E +FL+++ LI
Sbjct: 139 EFSEAQDMYYLETSAKESDNVEKLFLDLACRLI 171
>gi|432910564|ref|XP_004078416.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 208
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 93/145 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK++++ R+ FSH TIG F T + + +K Q+WDTAG ER+R++ Y
Sbjct: 20 GVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNSFTIKAQIWDTAGLERYRAITSAY 79
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+DIT++ ++ +++ W+KEL + D+ +V+ +VGNKTDLES R V EEA
Sbjct: 80 YRGAVGALLVYDITKHLTYESVERWLKELLDHADQHMVVMLVGNKTDLESERSVPSEEAK 139
Query: 236 HYSKSIGGTYYETSALQDQGIEDVF 260
++ G + ETSAL+ +E F
Sbjct: 140 DFADKNGLMFLETSALESTNVEAAF 164
>gi|432102772|gb|ELK30248.1| Ras-related protein Rab-30 [Myotis davidii]
Length = 203
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 19 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ ++ +VGNK DL REV+++ A
Sbjct: 79 YRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAE 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+S++ Y ETSA + +E +FL+++ LI
Sbjct: 139 EFSEAQDMYYLETSAKESDNVEKLFLDLACRLI 171
>gi|167539982|ref|XP_001741487.1| rab5 [Entamoeba dispar SAW760]
gi|165893902|gb|EDR22017.1| rab5, putative [Entamoeba dispar SAW760]
Length = 195
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 97/151 (64%), Gaps = 1/151 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R + TIGA+F T + V + +K ++WDTAGQER+ S+ PMYY
Sbjct: 19 VGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGDTIKFEIWDTAGQERYHSLTPMYY 78
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R +NAAL+V+DIT SF K W+ EL+ + +E ++ +VGNK DL SR + +EEA
Sbjct: 79 RGSNAALVVYDITSDSSFTQAKKWIDELRGSGNEAIIF-LVGNKCDLADSRVITKEEAEG 137
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++S+ Y ETSA + + ++F +++ L
Sbjct: 138 YARSLSIDYIETSAKANINVNELFDQIARKL 168
>gi|334327772|ref|XP_001377113.2| PREDICTED: ras-related protein Rab-30-like [Monodelphis domestica]
gi|395521092|ref|XP_003764654.1| PREDICTED: ras-related protein Rab-30 [Sarcophilus harrisii]
Length = 203
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 19 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ ++ +VGNK DL REV+++ A
Sbjct: 79 YRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAE 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+S++ Y ETSA + +E +FL+++ LI
Sbjct: 139 EFSEAQDMYYLETSAKESDNVEKLFLDLACRLI 171
>gi|403291443|ref|XP_003936799.1| PREDICTED: ras-related protein Rab-17 [Saimiri boliviensis
boliviensis]
Length = 212
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 102/153 (66%), Gaps = 2/153 (1%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+ +RY+ F I PT+G +FFT +++G++ +KL++WDTAGQE++ S+ +Y+
Sbjct: 30 VGKSSLALRYVKNDFKS-ILPTVGCAFFTKVVDLGDSSLKLEIWDTAGQEKYHSVCHLYF 88
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLC-VVGNKTDLESSREVNREEAF 235
R ANAALLV+DIT+ SF + W+K+L+R + VL +VGNKTDL REV EE
Sbjct: 89 RGANAALLVYDITRKDSFHKAQQWLKDLERELQPGEVLVMLVGNKTDLSEEREVAFEEGK 148
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
++ S + ETSA + + +VF V++ L+
Sbjct: 149 EFADSQKLLFMETSAKLNHQVLEVFSAVARELL 181
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+ +RY+ F I PT+G +FFT +++G++ +KL++
Sbjct: 30 VGKSSLALRYVKNDFKS-ILPTVGCAFFTKVVDLGDSSLKLEI 71
>gi|443895508|dbj|GAC72854.1| GTPase Rab5/YPT51 [Pseudozyma antarctica T-34]
Length = 321
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 106/194 (54%), Gaps = 42/194 (21%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTA-------------KINVGENKVKLQVWDT 162
VGK+S+V+R++ F + PTIGA+F T K + + +K ++WDT
Sbjct: 81 AVGKSSVVLRFVQNDFQENKEPTIGAAFLTVNCFHHSDPRHSQQKCRLEDRLIKFEIWDT 140
Query: 163 AGQERFRSMAPMYYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTD 222
AGQERF S+APMYYRNA A+ +++D+T+ SF K+WVKEL+R + +V+ +VGNK D
Sbjct: 141 AGQERFHSLAPMYYRNAQASAVIYDVTKASSFEKAKSWVKELQRQANPNIVIALVGNKID 200
Query: 223 L-----------------------------ESSREVNREEAFHYSKSIGGTYYETSALQD 253
L +S R V ++EA Y+K G ++ETSA
Sbjct: 201 LLNESSSSPSANADDNDDDDETATATPDAGDSLRAVPKDEAEAYAKESGLLFFETSAKTG 260
Query: 254 QGIEDVFLNVSKGL 267
+G+ +VF ++K +
Sbjct: 261 EGVVEVFTEIAKKI 274
>gi|344240431|gb|EGV96534.1| Ras-related protein Rab-30 [Cricetulus griseus]
Length = 201
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 17 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ ++ +VGNK DL REV+++ A
Sbjct: 77 YRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAE 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+S++ Y ETSA + +E +FL+++ LI
Sbjct: 137 EFSEAQDMYYLETSAKESDNVEKLFLDLACRLI 169
>gi|1457956|gb|AAC50774.1| Rab30 [Homo sapiens]
Length = 203
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 94/153 (61%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 19 GVGKTCLVRRFTQGLFPPGQGATIGVGFMIKTVEINGEKVKLQIWDTAGQERFRSITQSY 78
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ ++ +VGNK DL REV+++ A
Sbjct: 79 YRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAE 138
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+S++ Y ETSA + +E +FL+++ LI
Sbjct: 139 EFSEAQDMYYLETSAKESDNVEKLFLDLACRLI 171
>gi|357625222|gb|EHJ75731.1| ras-related GTP-binding protein 4b [Danaus plexippus]
Length = 214
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 92/153 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
G GK+S++ ++G F TIG F + IN+G KLQ+WDTAGQERFRS+ Y
Sbjct: 18 GTGKSSLLNNFLGNKFKEDRCHTIGVEFGSKIINIGGKSTKLQIWDTAGQERFRSVTRSY 77
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLV+D+T SF A+ W+++ + +V+ +VGNK DLE SREV EA
Sbjct: 78 YRGAAGALLVYDVTSRDSFNALSNWLRDARTLASPNIVILLVGNKKDLEGSREVTFTEAS 137
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+++ + ETSA + +E+ FL SK ++
Sbjct: 138 QFAQENELMFLETSARTGENVEEAFLKCSKTIL 170
>gi|395532154|ref|XP_003768136.1| PREDICTED: ras-related protein Rab-25 [Sarcophilus harrisii]
Length = 213
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G VK Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ ++A ++ W+KEL + + +V+ +VGNK+DL +REV +EA
Sbjct: 82 YRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSHAREVPTDEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>gi|395845171|ref|XP_003795316.1| PREDICTED: ras-related protein Rab-25 [Otolemur garnettii]
Length = 213
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ FSH TIG F T + +G +K Q+WDTAG ER+R++ Y
Sbjct: 22 GVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAY 81
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A ALLVFD+T++ +++ ++ W+KEL + + +V+ +VGNK+DL +REV EEA
Sbjct: 82 YRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVMLVGNKSDLSRAREVPTEEAR 141
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E F V K
Sbjct: 142 MFAENNGLLFLETSALDSTNVELAFETVLK 171
>gi|297702213|ref|XP_002828081.1| PREDICTED: ras-related protein Rab-31-like [Pongo abelii]
Length = 127
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 78/112 (69%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSR 227
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL R
Sbjct: 76 YRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 16 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 51
>gi|67480015|ref|XP_655377.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537437|dbj|BAB40673.1| small GTPase Rab5 [Entamoeba histolytica]
gi|56472508|gb|EAL49990.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 195
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+V+R + TIGA+F T + V +K ++WDTAGQER+ S+ PMYY
Sbjct: 19 VGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGETIKFEIWDTAGQERYHSLTPMYY 78
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAFH 236
R +NAAL+V+DIT SF K W+ EL+ + +E ++ +VGNK DL++SR + +EEA
Sbjct: 79 RGSNAALVVYDITSDSSFIQAKKWIDELRGSGNEAIIF-LVGNKCDLDNSRVITKEEAEG 137
Query: 237 YSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
Y++S+ Y ETSA + + ++F +++ L
Sbjct: 138 YARSLSIDYIETSAKANINVNELFDQIARKL 168
>gi|332256839|ref|XP_003277525.1| PREDICTED: ras-related protein Rab-17 isoform 1 [Nomascus
leucogenys]
Length = 212
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 102/153 (66%), Gaps = 2/153 (1%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+ +RY+ F I PT+G +FFT ++VG +KL++WDTAGQE++ S+ +Y+
Sbjct: 30 VGKSSLALRYVKNDFKS-ILPTVGCAFFTKVVDVGATSLKLEIWDTAGQEKYHSVCHLYF 88
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLC-VVGNKTDLESSREVNREEAF 235
R ANAALLV+DIT+ SF + W+K+L++ + VL +VGNKTDL REV +E
Sbjct: 89 RGANAALLVYDITRKDSFLKAQQWLKDLEKELHPGEVLVMLVGNKTDLSEEREVTFQEGK 148
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
++ S + ETSA +Q + +VF +V++ L+
Sbjct: 149 EFADSQRLLFMETSAKLNQQVREVFNSVAQELL 181
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+ +RY+ F I PT+G +FFT ++VG +KL++
Sbjct: 30 VGKSSLALRYVKNDFKS-ILPTVGCAFFTKVVDVGATSLKLEI 71
>gi|307777776|dbj|BAJ21284.1| Rab-family small GTPase Rab11C [Tetrahymena thermophila]
Length = 221
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 88/150 (58%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+ ++ R+ FS PTIG F T I + + +K Q+WDTAGQER+R++ Y
Sbjct: 23 GVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDKIIKAQIWDTAGQERYRAITSAY 82
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AL+VFDIT+ SF + W KEL+ + D +V ++GNK DL R ++++ A
Sbjct: 83 YRGAAGALIVFDITKQTSFENLAKWYKELQEHSDVQIVTMLIGNKCDLADQRNISKDAAS 142
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
+++ Y ETSAL +E F + K
Sbjct: 143 KFAQEYDMAYLETSALHSTNVEQAFHQIIK 172
>gi|57526504|ref|NP_001002750.1| ras-related protein Rab-30 [Danio rerio]
gi|49901476|gb|AAH76437.1| RAB30, member RAS oncogene family [Danio rerio]
Length = 201
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 93/153 (60%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT +V R+ +F TIG F + + KVKLQ+WDTAGQERFRS+ Y
Sbjct: 17 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGVKVKLQIWDTAGQERFRSITQSY 76
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR+ANA +L +DIT SF + W++E+++ + +V +VGNK DL REV R+ A
Sbjct: 77 YRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVGNKIDLADKREVLRQRAE 136
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
++ S Y ETSA + +E +FL+++ LI
Sbjct: 137 EFADSQSMLYLETSAKESDNVEKLFLDLACELI 169
>gi|347827173|emb|CCD42870.1| similar to vacuolar sorting-associated protein [Botryotinia
fuckeliana]
Length = 238
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 100/176 (56%), Gaps = 23/176 (13%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
LG +S+V+R++ F + PTIGA+F T K N+ +K ++WDTAGQERF S+APM
Sbjct: 20 LGEAASSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQERFASLAPM 79
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLES--------- 225
YYRNA +AL+V+D+T+ S A K WV EL+R +V+ +VGNK DL +
Sbjct: 80 YYRNAQSALVVYDLTKPTSLAKAKHWVAELQRQASPGIVIALVGNKLDLTNESDDSSNNL 139
Query: 226 --------------SREVNREEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+R+V+ EA Y++ G ++ETSA + +VF ++ +
Sbjct: 140 GDEESAEGEDSGGDARKVSTAEAKSYAEEEGLLFFETSAKLGTNVTEVFTAIANAI 195
>gi|363746901|ref|XP_003643843.1| PREDICTED: ras-related protein Rab-25-like, partial [Gallus gallus]
Length = 156
Score = 130 bits (326), Expect = 3e-27, Method: Composition-based stats.
Identities = 64/150 (42%), Positives = 96/150 (64%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT+++ R+ F+H TIG F T + VG+ VK Q+WDTAG ER+R++ Y
Sbjct: 7 GVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVLVGDAAVKAQIWDTAGLERYRAITSAY 66
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR A AL+VFDIT++ ++ ++ W+KEL + + +V+ +VGNK+DL REV EEA
Sbjct: 67 YRGAVGALVVFDITKHQTYDVVERWLKELYDHAEASIVVMLVGNKSDLAQEREVPTEEAK 126
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSK 265
++++ G + ETSAL +E+ F V K
Sbjct: 127 MFAENKGLLFIETSALDSTNVEEAFETVLK 156
>gi|407866814|gb|EKG08400.1| hypothetical protein TCSYLVIO_000448 [Trypanosoma cruzi]
Length = 211
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 96/150 (64%)
Query: 115 LGVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
+GVGK+ ++ R+ + F + + TIG F T +++ VKLQ+WDTAGQERFRS+
Sbjct: 15 MGVGKSCLMQRFTEQRFRNDLPHTIGVEFGTITVDINGETVKLQIWDTAGQERFRSVTRG 74
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR A ALLV+D+++ +F+ I TW+++ + N + V+ +VGNK+DL+ SREV+ EEA
Sbjct: 75 YYRGAAGALLVYDVSRRETFSRIGTWLQDARGNTNPHTVMMLVGNKSDLDESREVSYEEA 134
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVS 264
++ + E SAL +E FL+ +
Sbjct: 135 VKFADENNLLFVECSALNGDNVEQAFLSTA 164
>gi|26354324|dbj|BAC40790.1| unnamed protein product [Mus musculus]
Length = 234
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 96/170 (56%), Gaps = 18/170 (10%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVN----- 230
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V
Sbjct: 91 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQPCH 150
Query: 231 -------------REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+EA Y+ + ETSA + ++F+ ++K L
Sbjct: 151 LPCSPPTLFLTCLSQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 200
>gi|313227810|emb|CBY22959.1| unnamed protein product [Oikopleura dioica]
Length = 215
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 96/153 (62%), Gaps = 1/153 (0%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGKT + RY F+ TIG F +N+ N +K Q+WDT+G+ER+R++ Y
Sbjct: 16 GVGKTQIRNRYTLDEFNPQSKSTIGVEFAFKTVNINGNDIKGQIWDTSGEERYRAITSAY 75
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEAF 235
YR + A+LVFD+T+ SF +++ W +L++ DE +V+CVVGNK DL +REV+ EA
Sbjct: 76 YRGSVGAILVFDVTKPKSFESLENWASQLRQYADENIVVCVVGNKIDL-PTREVSTVEAE 134
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+++ G Y ETSAL G+E+ F V+K +
Sbjct: 135 RFARGNGFFYMETSALDGTGVENAFRQVTKKIF 167
>gi|350585967|ref|XP_003482086.1| PREDICTED: ras-related protein Rab-31-like [Sus scrofa]
Length = 149
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 78/112 (69%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
GVGK+S+V R++ F H+ISPTIGASF T + G K +WDTAGQERF S+APMY
Sbjct: 38 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 97
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSR 227
YR + AA++V+DIT+ SF +K WVKELK + E +V+ + GNK DL R
Sbjct: 98 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 149
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 340 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVG 375
GVGK+S+V R++ F H+ISPTIGASF T + G
Sbjct: 38 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCG 73
>gi|148670589|gb|EDL02536.1| RAB5C, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 270
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 96/170 (56%), Gaps = 18/170 (10%)
Query: 116 GVGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMY 175
VGK+S+V+R++ F + TIGA+F T + + + VK ++WDTAGQER+ S+APMY
Sbjct: 67 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 126
Query: 176 YRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVN----- 230
YR A AA++V+DIT +FA K WVKEL+R +V+ + GNK DL S R V
Sbjct: 127 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQPCH 186
Query: 231 -------------REEAFHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
+EA Y+ + ETSA + ++F+ ++K L
Sbjct: 187 LPCSPPTLFLTCLSQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 236
>gi|332375757|gb|AEE63019.1| unknown [Dendroctonus ponderosae]
Length = 258
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 96/153 (62%), Gaps = 1/153 (0%)
Query: 116 GVGKTSMVVRY-IGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPM 174
GVGKTS++V++ GK S S T+G F T + V ++KVKLQ+WDTAGQERFR +
Sbjct: 69 GVGKTSLLVKFDTGKFESSKFSATVGIGFTTKVVQVDDSKVKLQIWDTAGQERFRCVTHA 128
Query: 175 YYRNANAALLVFDITQYHSFAAIKTWVKELKRNVDEPLVLCVVGNKTDLESSREVNREEA 234
YYR+A+A LL++D+T SF I+ W+ E+K + +V+ ++GNK D S R + REE
Sbjct: 129 YYRDAHALLLLYDVTNKKSFDNIRAWLGEIKDYAHDDVVIMLLGNKADCGSDRAIKREEG 188
Query: 235 FHYSKSIGGTYYETSALQDQGIEDVFLNVSKGL 267
++ T+ ETSA Q +E F +++ L
Sbjct: 189 ERLAREYRVTFMETSAKSGQNVELAFHAIARDL 221
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 340 GVGKTSMVVRY-IGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
GVGKTS++V++ GK S S T+G F T + V ++KVKLQ+
Sbjct: 69 GVGKTSLLVKFDTGKFESSKFSATVGIGFTTKVVQVDDSKVKLQI 113
>gi|297265181|ref|XP_001091918.2| PREDICTED: ras-related protein Rab-17 [Macaca mulatta]
Length = 212
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 104/153 (67%), Gaps = 2/153 (1%)
Query: 117 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQVWDTAGQERFRSMAPMYY 176
VGK+S+ +RY+ F + I PT+G +FFT ++VG +KL++WDTAGQE++ S+ +Y+
Sbjct: 30 VGKSSLALRYVKNDFKN-ILPTVGCAFFTKVVDVGTASLKLEIWDTAGQEKYHSVCHLYF 88
Query: 177 RNANAALLVFDITQYHSFAAIKTWVKELKRNVD-EPLVLCVVGNKTDLESSREVNREEAF 235
R ANAALLV+DIT+ SF + W+K+L++ + E +++ +VGNKTDL REV +E
Sbjct: 89 RGANAALLVYDITRKDSFLKAQQWLKDLEKELHPEEVLVMLVGNKTDLSEEREVTFQEGK 148
Query: 236 HYSKSIGGTYYETSALQDQGIEDVFLNVSKGLI 268
+++S + ETSA + + +VF V++ L+
Sbjct: 149 EFAESQKLLFMETSAKLNYQVSEVFSAVAQELL 181
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 341 VGKTSMVVRYIGKMFSHHISPTIGASFFTAKINVGENKVKLQL 383
VGK+S+ +RY+ F + I PT+G +FFT ++VG +KL++
Sbjct: 30 VGKSSLALRYVKNDFKN-ILPTVGCAFFTKVVDVGTASLKLEI 71
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,370,631,437
Number of Sequences: 23463169
Number of extensions: 391612209
Number of successful extensions: 1013908
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 15383
Number of HSP's successfully gapped in prelim test: 6824
Number of HSP's that attempted gapping in prelim test: 966749
Number of HSP's gapped (non-prelim): 38671
length of query: 617
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 468
effective length of database: 8,863,183,186
effective search space: 4147969731048
effective search space used: 4147969731048
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)